BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254781037|ref|YP_003065450.1| porphobilinogen deaminase [Candidatus Liberibacter asiaticus str. psy62] (307 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254781037|ref|YP_003065450.1| porphobilinogen deaminase [Candidatus Liberibacter asiaticus str. psy62] gi|254040714|gb|ACT57510.1| porphobilinogen deaminase [Candidatus Liberibacter asiaticus str. psy62] Length = 307 Score = 631 bits (1628), Expect = e-179, Method: Compositional matrix adjust. Identities = 307/307 (100%), Positives = 307/307 (100%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG Sbjct: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD Sbjct: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK Sbjct: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL Sbjct: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS Sbjct: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 Query: 301 NKNVFNF 307 NKNVFNF Sbjct: 301 NKNVFNF 307 >gi|315122376|ref|YP_004062865.1| porphobilinogen deaminase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495778|gb|ADR52377.1| porphobilinogen deaminase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 307 Score = 518 bits (1334), Expect = e-145, Method: Compositional matrix adjust. Identities = 243/307 (79%), Positives = 276/307 (89%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 ME+K F+IGTR SPLALAHAFETRS LM VHKIP I ++PLSTKGDRITNRTLTEIGG Sbjct: 1 MEEKDFKIGTRRSPLALAHAFETRSYLMSVHKIPLEKIFVVPLSTKGDRITNRTLTEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEEIE+KLISGEID AVHSAKDMPTKLLKGL+ISAYLPRED+RDVFISHTAQSL D Sbjct: 61 KGLFTEEIERKLISGEIDFAVHSAKDMPTKLLKGLRISAYLPREDVRDVFISHTAQSLND 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LA++S++GTSSLRRKALLLRWR+D+S+IDFRGKIETRL KL N +A A+LLAYAGIKRLK Sbjct: 121 LAVNSIVGTSSLRRKALLLRWRADLSIIDFRGKIETRLTKLKNKQADAMLLAYAGIKRLK 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 KE V+KEILN+EDFPPSPGQGAICIETH+NN +A EL INH +TWD+V+CERAFLAEL Sbjct: 181 KESVVKEILNLEDFPPSPGQGAICIETHMNNTRAHELATAINHRETWDTVSCERAFLAEL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSCKSAIAGF+YCKG +LYFYG +L DGKIFHEVS++GN CDAI IGRDA ++IR I+ Sbjct: 241 DGSCKSAIAGFSYCKGQSLYFYGTILTPDGKIFHEVSKSGNCCDAIQIGRDAGRHIRLIA 300 Query: 301 NKNVFNF 307 +K +FN Sbjct: 301 DKTIFNL 307 >gi|325294021|ref|YP_004279885.1| Porphobilinogen deaminase [Agrobacterium sp. H13-3] gi|325061874|gb|ADY65565.1| Porphobilinogen deaminase [Agrobacterium sp. H13-3] Length = 309 Score = 361 bits (926), Expect = 9e-98, Method: Compositional matrix adjust. Identities = 172/306 (56%), Positives = 225/306 (73%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A+ETR+ LM H +P I+ LSTKGDRIT+R L+EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAYETRNRLMSAHGLPEDMFEIVVLSTKGDRITDRALSEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E +L+SGE+D AVHS+KDMPT L KGL +SA+LPRED+RD FI TA L + Sbjct: 61 KGLFTEELESQLLSGELDIAVHSSKDMPTVLPKGLYLSAFLPREDMRDAFIGRTAPKLLE 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+G++SLRR+AL+ R R D+SVI FRG++ETRL KL +A A LLA+AG+KRL Sbjct: 121 LPQGAVVGSASLRRQALIRRLRPDLSVIIFRGQVETRLRKLEEGQADATLLAFAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E V +IL+ +DFPP+P QGAIC+E+ + + + EL+ IN T+D+V CERAFLA L Sbjct: 181 MENVPTDILDPKDFPPAPAQGAICVESRIGDTRMDELLSPINDIPTYDAVTCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAGFA C G L+F G++L DG+ H V +G R DA ++GR A + +R + Sbjct: 241 DGSCRTPIAGFATCHGEELHFSGLILTPDGQTSHSVEISGARKDAEDLGRKAGEDVRARA 300 Query: 301 NKNVFN 306 N F+ Sbjct: 301 GSNFFD 306 >gi|15889908|ref|NP_355589.1| porphobilinogen deaminase [Agrobacterium tumefaciens str. C58] gi|23821691|sp|Q8UC46|HEM3_AGRT5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|15157859|gb|AAK88374.1| porphobilinogen deaminase [Agrobacterium tumefaciens str. C58] Length = 309 Score = 353 bits (905), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 167/306 (54%), Positives = 225/306 (73%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A+ETRS LM H +P I+ LSTKGDRIT+R L+EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAYETRSRLMAAHGLPEEMFEIVVLSTKGDRITDRALSEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E +L+SGE+D AVHS+KDMPT L +GL +SA+LPRED+RD FI TA L + Sbjct: 61 KGLFTEELENQLLSGELDIAVHSSKDMPTVLPEGLHLSAFLPREDMRDAFIGRTAPKLLE 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+G++SLRR+AL+ R R D++VI FRG ++TRL KL +A A LLA+AG+KRL Sbjct: 121 LPQGAVVGSASLRRQALIRRLRPDLNVIVFRGLVDTRLRKLEEGQADATLLAFAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K+ V EIL+ ++FPP+P QGAI +E+ + + + +L+ IN T+D+V CERAFLA L Sbjct: 181 KDNVPTEILDPKEFPPAPAQGAIGVESRIGDARMDKLLAPINDRPTYDAVTCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG+A C+G L+F G++L DG+ H V +GNR DA+ +G+ A + +R + Sbjct: 241 DGSCRTPIAGYATCEGDNLHFSGLILTPDGQTSHGVEISGNRRDALILGKKAGEEVRAKA 300 Query: 301 NKNVFN 306 N F Sbjct: 301 GSNFFE 306 >gi|190893753|ref|YP_001980295.1| porphobilinogen deaminase [Rhizobium etli CIAT 652] gi|190699032|gb|ACE93117.1| porphobilinogen deaminase protein [Rhizobium etli CIAT 652] Length = 309 Score = 344 bits (883), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 166/306 (54%), Positives = 217/306 (70%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A E R LM H +P I+ LSTKGDRIT+R+L EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEEMFEIVVLSTKGDRITDRSLAEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E+KL+SGE+D AVHSAKDMPT L GL +SAYLPREDIRD I TA L D Sbjct: 61 KGLFTEELEQKLVSGELDFAVHSAKDMPTHLPDGLHLSAYLPREDIRDAVIGRTAPKLID 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R DI+VI FRG +ETRL KL + A LLA AG+KRL Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVIIFRGSVETRLRKLEEGQVDATLLALAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K +V+ +IL+ + FPP+P QGAICIE+ + + + +L+ +N T+D+V+CERAFLA L Sbjct: 181 KVEVLTDILDPDTFPPAPAQGAICIESRIGDSRIDDLLAAVNDAATFDTVSCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R + Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300 Query: 301 NKNVFN 306 F+ Sbjct: 301 GSAFFD 306 >gi|86359485|ref|YP_471377.1| porphobilinogen deaminase [Rhizobium etli CFN 42] gi|86283587|gb|ABC92650.1| porphobilinogen deaminase protein [Rhizobium etli CFN 42] Length = 309 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 166/306 (54%), Positives = 216/306 (70%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A E R LM H + I+ L+TKGDRIT+R L EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHNLSEEMFEIVVLTTKGDRITDRPLAEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E+KL+SGE+D AVHSAKDMPT L GL +SAYLPREDIRD + TA L D Sbjct: 61 KGLFTEELEQKLVSGELDFAVHSAKDMPTHLPDGLHLSAYLPREDIRDAVVGRTAPKLID 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R DI+VI FRG +ETRL KL+ + A LLA AG+KRL Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVITFRGSVETRLRKLDEGQVDATLLALAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K +VI ++L+ + FPP+P QGAICIE+ V + K +L+ +N T+DSV+CERAFLA L Sbjct: 181 KVEVITDVLDPDTFPPAPAQGAICIESRVGDTKIDDLLAAVNDATTFDSVSCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R + Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300 Query: 301 NKNVFN 306 F+ Sbjct: 301 GSAFFD 306 >gi|209551271|ref|YP_002283188.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537027|gb|ACI56962.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 309 Score = 341 bits (874), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 163/306 (53%), Positives = 217/306 (70%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A E R LM H +P I+ LSTKGDRIT+R+L EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEEMFEIVVLSTKGDRITDRSLAEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E++L +GE+D AVHSAKDMPTKL GL +SAYLPREDIRD I TA L D Sbjct: 61 KGLFTEELEQQLTTGELDFAVHSAKDMPTKLPDGLHLSAYLPREDIRDAVIGRTAPKLID 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R DI+V+ FRG +ETRL KL + A LLA AG+KRL Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVVTFRGLVETRLRKLEEGQVDATLLALAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K +V+ +IL+ + FPP+P QGAIC+E+ + + + +L+ +N T+D+V+CERAFLA L Sbjct: 181 KVEVLTDILDPDTFPPAPAQGAICLESRIGDTQIDDLLAPVNDAATFDTVSCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R + Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300 Query: 301 NKNVFN 306 F+ Sbjct: 301 GSAFFD 306 >gi|241206704|ref|YP_002977800.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860594|gb|ACS58261.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 309 Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 164/306 (53%), Positives = 217/306 (70%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A E R LM H +P I+ L+TKGDRIT+R+L EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEDMFEIVVLTTKGDRITDRSLAEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E+KL +GE+D AVHSAKDM TKL +GL +SAYLPREDIRD I TA+ L D Sbjct: 61 KGLFTEELEQKLAAGELDFAVHSAKDMATKLPEGLYLSAYLPREDIRDAVIGRTARKLID 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R DI+VI FRG +ETRL KL + A LLA AG+KRL Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVITFRGLVETRLRKLEQGEVDATLLALAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K V+ +IL+ + FPP+P QGAICIE+ + + + +L+ +N T+D+V+CERAFLA L Sbjct: 181 KVDVLTDILDPDTFPPAPAQGAICIESRIGDARVDDLLAPVNDGPTFDTVSCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R + Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300 Query: 301 NKNVFN 306 F+ Sbjct: 301 GSAFFD 306 >gi|222150055|ref|YP_002551012.1| porphobilinogen deaminase [Agrobacterium vitis S4] gi|221737037|gb|ACM38000.1| porphobilinogen deaminase [Agrobacterium vitis S4] Length = 309 Score = 338 bits (868), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 164/306 (53%), Positives = 212/306 (69%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A ETR L H + P I+ LST GDRIT+R+L EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAHETRERLATAHGLSPDMFEIVVLSTTGDRITDRSLAEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT E+E++L+SG +D AVHS+KDMPT L GL+ISAYLPRED+RD FI TA L + Sbjct: 61 KGLFTLELEQQLLSGGLDFAVHSSKDMPTALPDGLEISAYLPREDMRDAFIGRTAPKLLE 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LA +VIG++SLRR+AL+ R R D+ VI +RG +ETRL KL + A LLA AG+KRL Sbjct: 121 LAEGAVIGSASLRRQALIRRLRPDLQVITYRGAVETRLRKLAAGEVDATLLAVAGLKRLD 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 KE VI + L++E FPP+P QGAICIE V++ + Q+L+ INH T+D+V+CERAFLA L Sbjct: 181 KETVITQYLDLESFPPAPAQGAICIEARVDDRRIQDLLAPINHRPTFDAVSCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG+A G + G +L DG++ H V G D + +G A + +R + Sbjct: 241 DGSCRTPIAGYAISDGEMIRLTGTILTPDGQVSHSVEAEGRCADGLALGWSAGEKVRDKA 300 Query: 301 NKNVFN 306 F Sbjct: 301 GPGFFE 306 >gi|116254224|ref|YP_770062.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. viciae 3841] gi|115258872|emb|CAK09980.1| putative porphobilinogen deaminase [Rhizobium leguminosarum bv. viciae 3841] Length = 309 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 163/306 (53%), Positives = 217/306 (70%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A E R LM H +P I+ L+TKGDRIT+R+L EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEDMFEIVVLTTKGDRITDRSLAEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E+KL +GE+D AVHSAKDM TKL +GL +SAYLPREDIRD I TA+ L D Sbjct: 61 KGLFTEELEQKLTAGELDFAVHSAKDMATKLPEGLYLSAYLPREDIRDAVIGRTARKLID 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R DI+V+ FRG +ETRL KL + A LLA AG+KRL Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVVTFRGLVETRLRKLEEGEVDATLLALAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K V+ +IL+ + FPP+P QGAICIE+ + + + +L+ +N T+D+V+CERAFLA L Sbjct: 181 KVDVLTDILDPDTFPPAPAQGAICIESRIGDARIDDLLAPVNDIMTFDTVSCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R + Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300 Query: 301 NKNVFN 306 F+ Sbjct: 301 GSAFFD 306 >gi|222087476|ref|YP_002546013.1| porphobilinogen deaminase [Agrobacterium radiobacter K84] gi|221724924|gb|ACM28080.1| porphobilinogen deaminase [Agrobacterium radiobacter K84] Length = 322 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 164/306 (53%), Positives = 214/306 (69%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A E R LM H +P I+ L+TKGDRI +RTL EIGG Sbjct: 14 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHGLPEEMFEIVALTTKGDRIADRTLAEIGG 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+KL SGE+D AVHSAKDM TKL +GL ++AYLPREDIRD I TA L + Sbjct: 74 KGLFTQELEEKLTSGELDFAVHSAKDMATKLPEGLALTAYLPREDIRDSVIGRTAPKLIE 133 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G++SLRR+AL+ R R DI+VI FRG ++TRL KL +A A LLA AG+KRL Sbjct: 134 LPHGATVGSASLRRQALIRRLRPDINVITFRGSVQTRLRKLEEGQADATLLAVAGLKRLG 193 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K VI +IL+ ++FPP+P QGAI IE+ + + + +L+ IN T+D V+CER FLA L Sbjct: 194 KVDVITDILDPDEFPPAPAQGAIGIESRIGDKRMNDLLAAINDSPTFDIVSCERGFLAAL 253 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG+A C+G + F+G++L DG+ H + GNR DA +G +A Q IR + Sbjct: 254 DGSCRTPIAGYAVCEGDHIRFFGMILTPDGQQVHTTTIEGNRRDAEALGTNAGQAIRAEA 313 Query: 301 NKNVFN 306 F Sbjct: 314 GSAFFE 319 >gi|15966832|ref|NP_387185.1| porphobilinogen deaminase [Sinorhizobium meliloti 1021] gi|307301660|ref|ZP_07581419.1| porphobilinogen deaminase [Sinorhizobium meliloti BL225C] gi|307316316|ref|ZP_07595760.1| porphobilinogen deaminase [Sinorhizobium meliloti AK83] gi|23821697|sp|Q92LH7|HEM3_RHIME RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|15076104|emb|CAC47658.1| Probable porphobilinogen deaminase [Sinorhizobium meliloti 1021] gi|306898156|gb|EFN28898.1| porphobilinogen deaminase [Sinorhizobium meliloti AK83] gi|306903358|gb|EFN33947.1| porphobilinogen deaminase [Sinorhizobium meliloti BL225C] Length = 309 Score = 335 bits (858), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 156/306 (50%), Positives = 215/306 (70%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLA+A ETR L H +PP I+ LSTKGDRIT+R+L EIGG Sbjct: 1 MQTKPFRIGTRGSPLAMAQTHETRDRLAAAHGLPPEMFEIVILSTKGDRITDRSLAEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E++L+SG++D AVHS+KDMPTKL +GL +SA+LPREDIRD F+ +A+ L D Sbjct: 61 KGLFTEELEQQLLSGDLDFAVHSSKDMPTKLPEGLFLSAFLPREDIRDAFVGRSAKRLVD 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R DI VI +RG++ETRL KL + LLAYAG++RL Sbjct: 121 LPQGATVGSSSLRRQALIRRLRPDIDVITYRGQVETRLRKLAEGQVDGTLLAYAGLRRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E V E+L+ E+FPP+P QGAIC+E + + + L+ I+ T ++V+CER FLA L Sbjct: 181 MEHVPTELLDPEEFPPAPAQGAICVEARIGDDRINTLLAAIDDPRTHEAVSCERGFLATL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG+A G+ + F G++L DG H++ +G DA +G++A + IR + Sbjct: 241 DGSCRTPIAGYAQSDGTHIRFAGMILTPDGTTSHQIEIDGRAADAERLGQEAGERIRAKA 300 Query: 301 NKNVFN 306 F+ Sbjct: 301 GPGFFS 306 >gi|163757401|ref|ZP_02164490.1| porphobilinogen deaminase [Hoeflea phototrophica DFL-43] gi|162284903|gb|EDQ35185.1| porphobilinogen deaminase [Hoeflea phototrophica DFL-43] Length = 312 Score = 334 bits (857), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 159/305 (52%), Positives = 209/305 (68%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + KP+RIGTR SPLALA A ETR LM H +P I+ LSTKGDRIT+R L EIGGK Sbjct: 5 QMKPYRIGTRGSPLALAQAHETRERLMAAHDLPESAFEIVVLSTKGDRITDRPLAEIGGK 64 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFTEE+E++L G +D AVHS+KDMPT L +GL I YL RED RD +IS A L+DL Sbjct: 65 GLFTEELEEQLSDGRLDLAVHSSKDMPTALPEGLGIVTYLEREDPRDAYISSAAPRLEDL 124 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+G+SSLRR+AL+ R R DISVI FRG ++TRL KL + + HA +LA+AG+KRL K Sbjct: 125 PQKAVVGSSSLRRQALIRRLRPDISVITFRGLVDTRLRKLADGEVHATMLAFAGLKRLGK 184 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +V+ +++ E FPP+PGQGAICIE +++ + EL+ I+H DT ++NCER FL LD Sbjct: 185 SEVVTNLMDPESFPPAPGQGAICIEARLDDERIAELLAPIDHADTHAALNCERGFLGALD 244 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC++ IAG A + + FYG++L DG FH++ G DA +G DA +R + Sbjct: 245 GSCRTPIAGHATLENGQVSFYGMILTPDGTTFHDIRVQGPAADAAQLGADAGAEVRARAG 304 Query: 302 KNVFN 306 F Sbjct: 305 SKFFE 309 >gi|227823724|ref|YP_002827697.1| porphobilinogen deaminase [Sinorhizobium fredii NGR234] gi|227342726|gb|ACP26944.1| porphobilinogen deaminase [Sinorhizobium fredii NGR234] Length = 309 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 157/306 (51%), Positives = 209/306 (68%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA ETR L H +PP ++ LSTKGDRIT+R L EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQTHETRDRLAAAHGLPPEMFEVVVLSTKGDRITDRPLAEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E++L+SG++D AVHS+KDMPTKL GL +SA+LPREDIRD F+ TA L + Sbjct: 61 KGLFTEELEQQLLSGDLDFAVHSSKDMPTKLPDGLFLSAFLPREDIRDAFVGRTAPRLVE 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R DI+VI +RG++ETRL KL + LLA+AG+KRL Sbjct: 121 LPEGATVGSSSLRRQALIRRLRPDINVITYRGQVETRLRKLAEGQVDGTLLAFAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V E+L+ ++FPP+P QGAICIE+ + + L+ I+ T ++V CER FLA L Sbjct: 181 MTDVPTELLDPKEFPPAPAQGAICIESRDGDDRVNALLAAIDDPRTHEAVACERGFLATL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG+A G+ + F G++L DG H V +G DA +GR A + IR + Sbjct: 241 DGSCRTPIAGYAQSDGTYIRFSGMILTPDGATSHRVEIDGKAQDATELGRKAGEQIRDKA 300 Query: 301 NKNVFN 306 F+ Sbjct: 301 GPGFFS 306 >gi|150398163|ref|YP_001328630.1| porphobilinogen deaminase [Sinorhizobium medicae WSM419] gi|150029678|gb|ABR61795.1| porphobilinogen deaminase [Sinorhizobium medicae WSM419] Length = 330 Score = 322 bits (826), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 152/305 (49%), Positives = 208/305 (68%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA ETR L H +P I+ LSTKGDRIT+R+L EIGG Sbjct: 22 MQTKPFRIGTRGSPLALAQTHETRDRLAAAHGLPVEMFEIVTLSTKGDRITDRSLAEIGG 81 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E++L+SG++D AVHS+KDM TKL GL +SA+LPRED+RD F+ +A L + Sbjct: 82 KGLFTEELEQQLLSGDLDFAVHSSKDMTTKLPDGLFLSAFLPREDVRDAFVGRSATRLAE 141 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R D++VI +RG++ETRL KL + LLAYAG++RL Sbjct: 142 LPQGATVGSSSLRRQALIRRLRPDVNVITYRGQVETRLRKLAEGQVDGTLLAYAGLRRLG 201 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V E+L+ E FPP+P QGAICIE + + + L+ ++ T ++V+CER FLA L Sbjct: 202 MAHVPTELLDPESFPPAPAQGAICIEARLGDDRINALLSAVDDPRTHEAVSCERGFLATL 261 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG+A G+ + F G++L DG H + +G DA +GR+A + IR + Sbjct: 262 DGSCRTPIAGYAQSDGARIRFSGMILTPDGTTCHRIETDGRTADAAALGREAGERIRAKA 321 Query: 301 NKNVF 305 F Sbjct: 322 GPEFF 326 >gi|153008310|ref|YP_001369525.1| porphobilinogen deaminase [Ochrobactrum anthropi ATCC 49188] gi|166217778|sp|A6WXJ2|HEM3_OCHA4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|151560198|gb|ABS13696.1| porphobilinogen deaminase [Ochrobactrum anthropi ATCC 49188] Length = 314 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 150/301 (49%), Positives = 196/301 (65%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LALA A+ETR LM+ H +P I IIP+ST GDRI +R L+EIGGKGLFT Sbjct: 11 LKIGTRGSKLALAQAYETRRRLMEAHGLPEEAIEIIPMSTAGDRIQDRALSEIGGKGLFT 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EEIE+ L G ID AVHS KDMPT L GL +S +L RED RD FI TA L DL + Sbjct: 71 EEIEQALTDGRIDLAVHSTKDMPTVLPDGLHLSVFLEREDPRDAFIGRTASRLLDLPQGA 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G+SSLRR+AL+ R R DI V+ FRG ++TRL KL + LA AG++RL VI Sbjct: 131 TVGSSSLRRQALIRRLRPDIQVVIFRGNVDTRLRKLEAGEVDGTFLACAGLRRLGLGDVI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ + E FPP+PGQGAI IET + + + L+ + H +T ++ CERAFLA LDGSC+ Sbjct: 191 TDLADPESFPPAPGQGAIGIETRIGDTRIDTLLAPLAHRETGIALACERAFLAALDGSCR 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG A G T+ F+G++L DG HE+ G +A IG +AA+++R + F Sbjct: 251 TPIAGLATVNGDTVSFHGMILKPDGSEAHEIKTEGPASNAAAIGTEAAEHLRAKAGPQFF 310 Query: 306 N 306 Sbjct: 311 E 311 >gi|110635531|ref|YP_675739.1| porphobilinogen deaminase [Mesorhizobium sp. BNC1] gi|110286515|gb|ABG64574.1| hydroxymethylbilane synthase [Chelativorans sp. BNC1] Length = 309 Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 153/306 (50%), Positives = 203/306 (66%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ +IGTR S LALA A ETR+ LM H +P I+ + T GDRI +R L+E GG Sbjct: 1 MQTDVIKIGTRGSALALAQAAETRARLMVAHGLPEDAFEIVVIRTSGDRIQDRPLSEAGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+ G ID AVHS+KDMPT L GL++SA+L RED+RDVFI A+ L+D Sbjct: 61 KGLFTKEIEEALLEGRIDLAVHSSKDMPTFLPDGLELSAFLEREDVRDVFIGRAAKRLED 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+AL LR R D+ V FRG ++TRL KL + A LLA AG+KRLK Sbjct: 121 LPHGANLGTSSLRRQALALRLRPDLKVGVFRGNVQTRLRKLEDGAADGTLLALAGLKRLK 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E V E+++ FPP+ GQGAICIE+ + + +LV+ I+H T +++CERAFLA L Sbjct: 181 LEHVATELMDPVIFPPALGQGAICIESRTGDTRIAKLVEAIHHPATGFALSCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ +AG A G + F G++L DG+ HE+ +G DA IGRDA + IR + Sbjct: 241 DGSCRTPMAGLATVDGDRIAFSGMILTPDGREVHEIGGDGAAQDAAEIGRDAGRRIRQKA 300 Query: 301 NKNVFN 306 F Sbjct: 301 GAGFFE 306 >gi|319780787|ref|YP_004140263.1| porphobilinogen deaminase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166675|gb|ADV10213.1| porphobilinogen deaminase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 308 Score = 301 bits (772), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 141/301 (46%), Positives = 206/301 (68%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLALA A ET++ LM H +P ++ +ST GDRI +R L+E GGKGLFT Sbjct: 5 LRIGTRGSPLALAQAHETQARLMAAHGMPAEAFEVVVISTSGDRIQDRPLSEAGGKGLFT 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L++G ID AVHS+KDMPT+L GL++SA+LPRED RD F+ A+++ +L + Sbjct: 65 KEIEEALLAGRIDIAVHSSKDMPTQLPDGLELSAFLPREDARDAFVGKVAKAIAELPRGA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G+SSLRR+AL+ R R D+ V+ FRG ++TRL KL A +LAYAG+KRL E V+ Sbjct: 125 KVGSSSLRRQALIRRMRPDLDVVMFRGNVQTRLRKLEEGVAAGTILAYAGLKRLGLEHVV 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +++ ++ FPP+PGQGAI IET + + ++++ ++ T ++ CERAFLA LDGSC+ Sbjct: 185 TDLIPLDVFPPAPGQGAIGIETRIGDRDVEKMLAAVHDVPTGQALACERAFLAALDGSCR 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG+A + L F G++++ DG H V G+ DA IG +AA+ +R + + F Sbjct: 245 TPIAGYAAIEAGKLSFAGLIISPDGTQSHTVELQGSAQDAARIGGEAARSVRARAGEKFF 304 Query: 306 N 306 + Sbjct: 305 D 305 >gi|239833011|ref|ZP_04681340.1| porphobilinogen deaminase [Ochrobactrum intermedium LMG 3301] gi|239825278|gb|EEQ96846.1| porphobilinogen deaminase [Ochrobactrum intermedium LMG 3301] Length = 314 Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 149/301 (49%), Positives = 195/301 (64%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LALA A+ETR LM+ H +P I I+P+ST GDRI +R L+EIGGKGLFT Sbjct: 11 LKIGTRGSKLALAQAYETRRRLMEAHGLPEEAIEIVPMSTAGDRIQDRALSEIGGKGLFT 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EEIE+ L G ID AVHS KDMPT L GL +S +L RED RD FI TA L DL + Sbjct: 71 EEIEQALTDGRIDLAVHSTKDMPTVLPDGLHLSVFLEREDPRDAFIGRTASRLLDLPQGA 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G+SSLRR+AL+ R R DI V+ FRG ++TRL KL + LA AG++RL VI Sbjct: 131 TVGSSSLRRQALIRRLRPDIQVVIFRGNVDTRLRKLEAGEVDGTFLACAGLRRLGLGDVI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+++ E F P+PGQGAI IET + + + L+ + H +T ++ CERAFLA LDGSC+ Sbjct: 191 TELVDPESFLPAPGQGAIGIETRIGDTRIDALLAPLAHRETGIALACERAFLAALDGSCR 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG A G + F+G++L DG HE+ G +A +GR+AA+ IR + F Sbjct: 251 TPIAGLATVDGDRVSFHGMILKPDGSEAHEIRAEGPVSNAAALGREAAERIRAKAGPQFF 310 Query: 306 N 306 Sbjct: 311 E 311 >gi|13473577|ref|NP_105145.1| porphobilinogen deaminase [Mesorhizobium loti MAFF303099] gi|23821698|sp|Q98EI7|HEM3_RHILO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|14024327|dbj|BAB50931.1| hydroxymethylbilane synthase [Mesorhizobium loti MAFF303099] Length = 308 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 142/301 (47%), Positives = 204/301 (67%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR SPLALA A ET++ LM H +P ++ +ST GDRI +R L+E GGKGLFT Sbjct: 5 LKIGTRGSPLALAQAHETQARLMAAHGLPAEAFEVVVISTSGDRIQDRPLSEAGGKGLFT 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L++G ID AVHS+KDMPT+L GL++SA+LPRED RD F+ A+++ DL + Sbjct: 65 KEIEEALLAGAIDIAVHSSKDMPTQLPDGLELSAFLPREDARDAFVGKAAKTIADLLRGA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G+SSLRR+AL+ R R D+ V+ FRG ++TRL KL+ A +LAYAG+KRL E V Sbjct: 125 KVGSSSLRRQALIRRMRPDLDVVMFRGNVQTRLRKLDEGVAAGTILAYAGLKRLGLEHVA 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +++ ++ FPP+PGQGAI IET + + ++++ I+ T ++ CERAFLA LDGSC+ Sbjct: 185 TDLMPLDIFPPAPGQGAIGIETRIGDRAVEKMLVAIHDVPTGQALACERAFLAALDGSCR 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG A + L F G++++ DG H V G DA IG +AA+ +R + + F Sbjct: 245 TPIAGHATIETGNLSFAGLIISPDGTQSHTVELQGPAQDAARIGDEAARTVRAKAGEKFF 304 Query: 306 N 306 + Sbjct: 305 D 305 >gi|254502424|ref|ZP_05114575.1| porphobilinogen deaminase [Labrenzia alexandrii DFL-11] gi|222438495|gb|EEE45174.1| porphobilinogen deaminase [Labrenzia alexandrii DFL-11] Length = 308 Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 142/297 (47%), Positives = 199/297 (67%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ P RIGTR S LALA A ETR+ LM H +P I+ + T GD+I +R L+E+GG Sbjct: 1 MQSNPLRIGTRGSALALAQAHETRARLMAAHDLPEDAFEIVVIKTSGDQIQDRPLSEVGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ ++ G ID AVHS+KDMPT L GL ++A+LPRED+RD F+S A++L D Sbjct: 61 KGLFTKEIEEAMLDGRIDLAVHSSKDMPTVLPDGLALTAFLPREDVRDAFLSPKAKTLMD 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+G+SSLRR+A++ R R DI V+ +RG ++TRL KL + A LLAYAG++RL Sbjct: 121 LPHGAVVGSSSLRRQAMIKRLRPDIEVVMYRGNLQTRLRKLAEGEVDATLLAYAGLRRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ + +L EDF P+ GQGAICIE+ + + E+++ I+ +T ++ ERAFLA L Sbjct: 181 LEEEVTSLLETEDFLPAVGQGAICIESREGDERTLEMLQAIHDRETQIRLDAERAFLAVL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 DGSC++ I G A G L G VL DG H+ R+G DA+ IG+ A + ++ Sbjct: 241 DGSCRTPIGGLALLNGDELTLKGTVLKPDGSEVHDEVRSGGAVDAVQIGQAAGEALK 297 >gi|260464233|ref|ZP_05812426.1| porphobilinogen deaminase [Mesorhizobium opportunistum WSM2075] gi|259030036|gb|EEW31319.1| porphobilinogen deaminase [Mesorhizobium opportunistum WSM2075] Length = 308 Score = 294 bits (752), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 138/301 (45%), Positives = 205/301 (68%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR SPLALA A ET++ LM H +P ++ +ST GDRI +R L+E GGKGLFT Sbjct: 5 LKIGTRGSPLALAQAHETQARLMAAHGMPAEAFEVVVISTSGDRIQDRPLSEAGGKGLFT 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L++G ID AVHS+KDMPT+L GL++SA+L RED RD ++ +++ DL + Sbjct: 65 KEIEEALLAGAIDIAVHSSKDMPTQLPDGLELSAFLSREDARDAYVGKATKTIADLPRGA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G+SSLRR+AL+ R R D+ V+ FRG ++TRL KL+ A +LAYAG+KRL + V+ Sbjct: 125 KVGSSSLRRQALIRRMRPDLDVVMFRGNVQTRLRKLDEGVAAGTILAYAGLKRLGLDHVV 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +++ ++ FPP+PGQGAI IET + + ++++ I+ T ++ CERAFLA LDGSC+ Sbjct: 185 TDLIPLDVFPPAPGQGAIGIETRIGDRAVEKMLVAIHDVPTGQALACERAFLAALDGSCR 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG+A +G L F G++++ DG H + G DA IG +AA+ +R + + F Sbjct: 245 TPIAGYAAIEGGKLSFAGLIISPDGTQSHTIDLQGPAQDAALIGTEAARTVRAKAGEKFF 304 Query: 306 N 306 + Sbjct: 305 D 305 >gi|306844857|ref|ZP_07477440.1| porphobilinogen deaminase [Brucella sp. BO1] gi|306274789|gb|EFM56570.1| porphobilinogen deaminase [Brucella sp. BO1] Length = 314 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 143/301 (47%), Positives = 197/301 (65%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT Sbjct: 11 LKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL + Sbjct: 71 EEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI Sbjct: 131 TVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+ Sbjct: 191 TDLLDPSVFPPAPGQGAIGIESRIGDERIDALLAPLAHRETQIALACERAFLGSLDGSCR 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + F Sbjct: 251 TPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGAVSDAAALGTDAANRVRAMAGPHFF 310 Query: 306 N 306 + Sbjct: 311 D 311 >gi|62290744|ref|YP_222537.1| porphobilinogen deaminase [Brucella abortus bv. 1 str. 9-941] gi|82700655|ref|YP_415229.1| porphobilinogen deaminase [Brucella melitensis biovar Abortus 2308] gi|189024957|ref|YP_001935725.1| porphobilinogen deaminase [Brucella abortus S19] gi|225853324|ref|YP_002733557.1| porphobilinogen deaminase [Brucella melitensis ATCC 23457] gi|254690032|ref|ZP_05153286.1| porphobilinogen deaminase [Brucella abortus bv. 6 str. 870] gi|254694521|ref|ZP_05156349.1| porphobilinogen deaminase [Brucella abortus bv. 3 str. Tulya] gi|254696146|ref|ZP_05157974.1| porphobilinogen deaminase [Brucella abortus bv. 2 str. 86/8/59] gi|254731064|ref|ZP_05189642.1| porphobilinogen deaminase [Brucella abortus bv. 4 str. 292] gi|256045496|ref|ZP_05448379.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. Rev.1] gi|256112222|ref|ZP_05453143.1| porphobilinogen deaminase [Brucella melitensis bv. 3 str. Ether] gi|256258286|ref|ZP_05463822.1| porphobilinogen deaminase [Brucella abortus bv. 9 str. C68] gi|256263189|ref|ZP_05465721.1| porphobilinogen deaminase [Brucella melitensis bv. 2 str. 63/9] gi|260546007|ref|ZP_05821747.1| porphobilinogen deaminase [Brucella abortus NCTC 8038] gi|260562805|ref|ZP_05833291.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M] gi|260755568|ref|ZP_05867916.1| porphobilinogen deaminase [Brucella abortus bv. 6 str. 870] gi|260758791|ref|ZP_05871139.1| porphobilinogen deaminase [Brucella abortus bv. 4 str. 292] gi|260760515|ref|ZP_05872858.1| porphobilinogen deaminase [Brucella abortus bv. 2 str. 86/8/59] gi|260884592|ref|ZP_05896206.1| porphobilinogen deaminase [Brucella abortus bv. 9 str. C68] gi|261214839|ref|ZP_05929120.1| porphobilinogen deaminase [Brucella abortus bv. 3 str. Tulya] gi|265991918|ref|ZP_06104475.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. Rev.1] gi|265993649|ref|ZP_06106206.1| porphobilinogen deaminase [Brucella melitensis bv. 3 str. Ether] gi|297247130|ref|ZP_06930848.1| porphobilinogen deaminase [Brucella abortus bv. 5 str. B3196] gi|23821695|sp|Q8YJB0|HEM3_BRUME RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|75496218|sp|Q57B08|HEM3_BRUAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123768401|sp|Q2YLM5|HEM3_BRUA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238058730|sp|B2S842|HEM3_BRUA1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800235|sp|C0RFD1|HEM3_BRUMB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|62196876|gb|AAX75176.1| HemC, porphobilinogen deaminase [Brucella abortus bv. 1 str. 9-941] gi|82616756|emb|CAJ11843.1| Porphobilinogen deaminase [Brucella melitensis biovar Abortus 2308] gi|189020529|gb|ACD73251.1| Porphobilinogen deaminase [Brucella abortus S19] gi|225641689|gb|ACO01603.1| porphobilinogen deaminase [Brucella melitensis ATCC 23457] gi|260096114|gb|EEW79990.1| porphobilinogen deaminase [Brucella abortus NCTC 8038] gi|260152821|gb|EEW87913.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M] gi|260669109|gb|EEX56049.1| porphobilinogen deaminase [Brucella abortus bv. 4 str. 292] gi|260670947|gb|EEX57768.1| porphobilinogen deaminase [Brucella abortus bv. 2 str. 86/8/59] gi|260675676|gb|EEX62497.1| porphobilinogen deaminase [Brucella abortus bv. 6 str. 870] gi|260874120|gb|EEX81189.1| porphobilinogen deaminase [Brucella abortus bv. 9 str. C68] gi|260916446|gb|EEX83307.1| porphobilinogen deaminase [Brucella abortus bv. 3 str. Tulya] gi|262764630|gb|EEZ10551.1| porphobilinogen deaminase [Brucella melitensis bv. 3 str. Ether] gi|263002984|gb|EEZ15277.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. Rev.1] gi|263093111|gb|EEZ17246.1| porphobilinogen deaminase [Brucella melitensis bv. 2 str. 63/9] gi|297174299|gb|EFH33646.1| porphobilinogen deaminase [Brucella abortus bv. 5 str. B3196] gi|326539601|gb|ADZ87816.1| porphobilinogen deaminase [Brucella melitensis M5-90] Length = 314 Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 143/301 (47%), Positives = 197/301 (65%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT Sbjct: 11 LKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL + Sbjct: 71 EEIEQALKDGRIDIAVHSTKDMPTALPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI Sbjct: 131 TVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+ Sbjct: 191 TDVLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSCR 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + F Sbjct: 251 TPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHFF 310 Query: 306 N 306 + Sbjct: 311 D 311 >gi|306842959|ref|ZP_07475593.1| porphobilinogen deaminase [Brucella sp. BO2] gi|306286887|gb|EFM58412.1| porphobilinogen deaminase [Brucella sp. BO2] Length = 314 Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 143/301 (47%), Positives = 197/301 (65%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT Sbjct: 11 LKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL + Sbjct: 71 EEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI Sbjct: 131 TVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+ Sbjct: 191 TDLLDPSVFPPAPGQGAIGIESRIGDERIDALLAPLAHRETQIALACERAFLGALDGSCR 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + F Sbjct: 251 TPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHFF 310 Query: 306 N 306 + Sbjct: 311 D 311 >gi|254713697|ref|ZP_05175508.1| porphobilinogen deaminase [Brucella ceti M644/93/1] gi|254715953|ref|ZP_05177764.1| porphobilinogen deaminase [Brucella ceti M13/05/1] gi|261217716|ref|ZP_05931997.1| porphobilinogen deaminase [Brucella ceti M13/05/1] gi|261321437|ref|ZP_05960634.1| porphobilinogen deaminase [Brucella ceti M644/93/1] gi|260922805|gb|EEX89373.1| porphobilinogen deaminase [Brucella ceti M13/05/1] gi|261294127|gb|EEX97623.1| porphobilinogen deaminase [Brucella ceti M644/93/1] Length = 314 Score = 292 bits (747), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 143/301 (47%), Positives = 197/301 (65%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT Sbjct: 11 LKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL + Sbjct: 71 EEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI Sbjct: 131 TVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+ Sbjct: 191 TDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSCR 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + F Sbjct: 251 TPIAGLATVEGDRLSFQGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHFF 310 Query: 306 N 306 + Sbjct: 311 D 311 >gi|294851125|ref|ZP_06791798.1| porphobilinogen deaminase [Brucella sp. NVSL 07-0026] gi|294819714|gb|EFG36713.1| porphobilinogen deaminase [Brucella sp. NVSL 07-0026] Length = 314 Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 143/301 (47%), Positives = 197/301 (65%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT Sbjct: 11 LKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL + Sbjct: 71 EEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI Sbjct: 131 TVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+ Sbjct: 191 TDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSCR 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + F Sbjct: 251 TPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGSHFF 310 Query: 306 N 306 + Sbjct: 311 D 311 >gi|148559606|ref|YP_001259712.1| porphobilinogen deaminase [Brucella ovis ATCC 25840] gi|166201494|sp|A5VSL5|HEM3_BRUO2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|148370863|gb|ABQ60842.1| porphobilinogen deaminase [Brucella ovis ATCC 25840] Length = 304 Score = 291 bits (746), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 143/301 (47%), Positives = 197/301 (65%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT Sbjct: 1 MKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL + Sbjct: 61 EEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI Sbjct: 121 TVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+ Sbjct: 181 TDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSCR 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + F Sbjct: 241 TPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHFF 300 Query: 306 N 306 + Sbjct: 301 D 301 >gi|23502739|ref|NP_698866.1| porphobilinogen deaminase [Brucella suis 1330] gi|161619804|ref|YP_001593691.1| porphobilinogen deaminase [Brucella canis ATCC 23365] gi|163843911|ref|YP_001628315.1| porphobilinogen deaminase [Brucella suis ATCC 23445] gi|254704902|ref|ZP_05166730.1| porphobilinogen deaminase [Brucella suis bv. 3 str. 686] gi|254707583|ref|ZP_05169411.1| porphobilinogen deaminase [Brucella pinnipedialis M163/99/10] gi|254708880|ref|ZP_05170691.1| porphobilinogen deaminase [Brucella pinnipedialis B2/94] gi|256030406|ref|ZP_05444020.1| porphobilinogen deaminase [Brucella pinnipedialis M292/94/1] gi|256059864|ref|ZP_05450051.1| porphobilinogen deaminase [Brucella neotomae 5K33] gi|256158389|ref|ZP_05456287.1| porphobilinogen deaminase [Brucella ceti M490/95/1] gi|256253808|ref|ZP_05459344.1| porphobilinogen deaminase [Brucella ceti B1/94] gi|256370288|ref|YP_003107799.1| porphobilinogen deaminase [Brucella microti CCM 4915] gi|260169315|ref|ZP_05756126.1| porphobilinogen deaminase [Brucella sp. F5/99] gi|260567624|ref|ZP_05838094.1| porphobilinogen deaminase [Brucella suis bv. 4 str. 40] gi|261220941|ref|ZP_05935222.1| porphobilinogen deaminase [Brucella ceti B1/94] gi|261315070|ref|ZP_05954267.1| porphobilinogen deaminase [Brucella pinnipedialis M163/99/10] gi|261316373|ref|ZP_05955570.1| porphobilinogen deaminase [Brucella pinnipedialis B2/94] gi|261323834|ref|ZP_05963031.1| porphobilinogen deaminase [Brucella neotomae 5K33] gi|261755596|ref|ZP_05999305.1| porphobilinogen deaminase [Brucella suis bv. 3 str. 686] gi|261758828|ref|ZP_06002537.1| porphobilinogen deaminase [Brucella sp. F5/99] gi|265987445|ref|ZP_06100002.1| porphobilinogen deaminase [Brucella pinnipedialis M292/94/1] gi|265996901|ref|ZP_06109458.1| porphobilinogen deaminase [Brucella ceti M490/95/1] gi|38258150|sp|Q8FYI6|HEM3_BRUSU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189042875|sp|A9M8M2|HEM3_BRUC2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189042876|sp|B0CID9|HEM3_BRUSI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|23348756|gb|AAN30781.1| porphobilinogen deaminase [Brucella suis 1330] gi|161336615|gb|ABX62920.1| porphobilinogen deaminase [Brucella canis ATCC 23365] gi|163674634|gb|ABY38745.1| porphobilinogen deaminase [Brucella suis ATCC 23445] gi|256000451|gb|ACU48850.1| porphobilinogen deaminase [Brucella microti CCM 4915] gi|260157142|gb|EEW92222.1| porphobilinogen deaminase [Brucella suis bv. 4 str. 40] gi|260919525|gb|EEX86178.1| porphobilinogen deaminase [Brucella ceti B1/94] gi|261295596|gb|EEX99092.1| porphobilinogen deaminase [Brucella pinnipedialis B2/94] gi|261299814|gb|EEY03311.1| porphobilinogen deaminase [Brucella neotomae 5K33] gi|261304096|gb|EEY07593.1| porphobilinogen deaminase [Brucella pinnipedialis M163/99/10] gi|261738812|gb|EEY26808.1| porphobilinogen deaminase [Brucella sp. F5/99] gi|261745349|gb|EEY33275.1| porphobilinogen deaminase [Brucella suis bv. 3 str. 686] gi|262551369|gb|EEZ07359.1| porphobilinogen deaminase [Brucella ceti M490/95/1] gi|264659642|gb|EEZ29903.1| porphobilinogen deaminase [Brucella pinnipedialis M292/94/1] Length = 314 Score = 291 bits (746), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 143/301 (47%), Positives = 197/301 (65%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT Sbjct: 11 LKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL + Sbjct: 71 EEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI Sbjct: 131 TVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+ Sbjct: 191 TDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSCR 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + F Sbjct: 251 TPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHFF 310 Query: 306 N 306 + Sbjct: 311 D 311 >gi|17986460|ref|NP_539094.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M] gi|237816250|ref|ZP_04595243.1| porphobilinogen deaminase [Brucella abortus str. 2308 A] gi|17982057|gb|AAL51358.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M] gi|237788317|gb|EEP62532.1| porphobilinogen deaminase [Brucella abortus str. 2308 A] Length = 342 Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 143/301 (47%), Positives = 197/301 (65%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT Sbjct: 39 LKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 98 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL + Sbjct: 99 EEIEQALKDGRIDIAVHSTKDMPTALPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 158 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI Sbjct: 159 TVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVI 218 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+ Sbjct: 219 TDVLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSCR 278 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + F Sbjct: 279 TPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHFF 338 Query: 306 N 306 + Sbjct: 339 D 339 >gi|254717954|ref|ZP_05179765.1| porphobilinogen deaminase [Brucella sp. 83/13] gi|265982897|ref|ZP_06095632.1| porphobilinogen deaminase [Brucella sp. 83/13] gi|306838958|ref|ZP_07471782.1| porphobilinogen deaminase [Brucella sp. NF 2653] gi|264661489|gb|EEZ31750.1| porphobilinogen deaminase [Brucella sp. 83/13] gi|306405961|gb|EFM62216.1| porphobilinogen deaminase [Brucella sp. NF 2653] Length = 314 Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 142/301 (47%), Positives = 197/301 (65%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT Sbjct: 11 LKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL + Sbjct: 71 EEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI Sbjct: 131 IVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVGGTFLACAGLRRLGLADVI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+ Sbjct: 191 TDLLDPSVFPPAPGQGAIGIESRIGDERIDALLAPLAHRETQIALACERAFLGALDGSCR 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG A +G L F G++L DG+ HEV+ DA +G DAA +R ++ + F Sbjct: 251 TPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEEAVSDAAALGTDAANRVRAMAGPHFF 310 Query: 306 N 306 + Sbjct: 311 D 311 >gi|118592006|ref|ZP_01549400.1| porphobilinogen deaminase [Stappia aggregata IAM 12614] gi|118435302|gb|EAV41949.1| porphobilinogen deaminase [Stappia aggregata IAM 12614] Length = 303 Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 143/292 (48%), Positives = 194/292 (66%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LALA A ETR LM H + + I+ + T GDRI +R L+E+GGKGLFT Sbjct: 1 MRIGTRGSALALAQAHETRDRLMAAHGLAEDSFEIVVIKTSGDRIQDRPLSEVGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G ID AVHS+KDMPT L GL ++A+LPRED+RD F+S A++L DL + Sbjct: 61 KEIEEALLDGRIDLAVHSSKDMPTVLPDGLALTAFLPREDVRDAFLSPKAKTLTDLPHGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+G+SSLRR+A++ R R DI V+ +RG ++TRL KL A LLA AG++RL E I Sbjct: 121 VVGSSSLRRQAMIKRLRPDIEVVMYRGNLQTRLRKLAEGAVDATLLAAAGLRRLGLEAEI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +L + F P+ GQGAICIE+ ++ E++ I+ E T ++ ERAFLA LDGSC+ Sbjct: 181 TSLLETDQFLPAVGQGAICIESRADDTATLEMLAAIHDEATQIRLDAERAFLAVLDGSCR 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + I G A G TL+F GIVL DG HE + +G + DA+ IGR + ++ Sbjct: 241 TPIGGLATLDGDTLHFRGIVLKPDGSEVHEATASGLKSDAVQIGRSVGEDLK 292 >gi|254700531|ref|ZP_05162359.1| porphobilinogen deaminase [Brucella suis bv. 5 str. 513] gi|261751035|ref|ZP_05994744.1| porphobilinogen deaminase [Brucella suis bv. 5 str. 513] gi|261740788|gb|EEY28714.1| porphobilinogen deaminase [Brucella suis bv. 5 str. 513] Length = 314 Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 142/301 (47%), Positives = 196/301 (65%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IG R S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT Sbjct: 11 LKIGARGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL + Sbjct: 71 EEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI Sbjct: 131 TVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+ Sbjct: 191 TDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSCR 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + F Sbjct: 251 TPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHFF 310 Query: 306 N 306 + Sbjct: 311 D 311 >gi|225628089|ref|ZP_03786124.1| porphobilinogen deaminase [Brucella ceti str. Cudo] gi|225616914|gb|EEH13961.1| porphobilinogen deaminase [Brucella ceti str. Cudo] Length = 342 Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 143/301 (47%), Positives = 197/301 (65%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT Sbjct: 39 LKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 98 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL + Sbjct: 99 EEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 158 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI Sbjct: 159 TVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVI 218 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+ Sbjct: 219 TDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSCR 278 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + F Sbjct: 279 TPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHFF 338 Query: 306 N 306 + Sbjct: 339 D 339 >gi|307942602|ref|ZP_07657950.1| porphobilinogen deaminase [Roseibium sp. TrichSKD4] gi|307774241|gb|EFO33454.1| porphobilinogen deaminase [Roseibium sp. TrichSKD4] Length = 307 Score = 289 bits (739), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 142/306 (46%), Positives = 197/306 (64%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ RIGTR S LALA A ETR LM H +P I+ + T GD+I +R L+E+GG Sbjct: 1 MQSTLLRIGTRGSQLALAQAHETRDRLMAAHGLPEDAFEIVVVKTSGDQIQDRPLSEVGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE L+ G +D AVHS+KDMPT L GL I+A+LPRED+RD FIS A++L+D Sbjct: 61 KGLFTKEIEDMLLDGSLDLAVHSSKDMPTVLPAGLDITAFLPREDVRDAFISPKAKTLRD 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+G+SSLRR+A++ R R DI V+ +RG ++TRL KL+ A LLA+AG+KRL Sbjct: 121 LPHGAVVGSSSLRRQAMVKRLRPDIDVVMYRGNVQTRLRKLDEGVVDATLLAHAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V+ ++ +DF P+ GQGAIC+E+ +++ K L+ IN +T + ERAFL L Sbjct: 181 LGDVVTSVIEADDFVPAVGQGAICLESRLDDEKTNGLLSAINDPETRVRLEAERAFLGVL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DG+C++ I G A G TL G++L DG HEV +G+ DA IG A + ++ + Sbjct: 241 DGTCRTPIGGLATVDGDTLTLKGVILKPDGSQMHEVEHSGSVQDAEAIGLAAGEELKSKA 300 Query: 301 NKNVFN 306 N Sbjct: 301 GPNFLT 306 >gi|328541997|ref|YP_004302106.1| Porphobilinogen deaminase [polymorphum gilvum SL003B-26A1] gi|326411747|gb|ADZ68810.1| Porphobilinogen deaminase [Polymorphum gilvum SL003B-26A1] Length = 302 Score = 288 bits (737), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 143/300 (47%), Positives = 193/300 (64%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LALA A ETR+ LM H + I+ + T GDRI +R L+E+GGKGLFT Sbjct: 1 MRIGTRGSALALAQAHETRARLMAAHGLAEDAFEIVVIKTSGDRILDRPLSEVGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ ID AVHS+KDMPT L GL ++A+LPRED+RD F+S A+ L DL + Sbjct: 61 KEIEEALLDDRIDLAVHSSKDMPTLLPDGLALTAFLPREDVRDAFVSPKAKMLMDLPQGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+G+SSLRR+A++ R R DI V+ +RG ++TRL KL + A LLAYAG++RL V+ Sbjct: 121 VVGSSSLRRQAMIKRLRPDIEVVMYRGNVQTRLQKLEDGAVDATLLAYAGLRRLGLADVV 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +L+ + F P+ GQGAICIE+ V + L+ I+ +T + ERAFLAELDGSC+ Sbjct: 181 TSLLDTDAFLPAVGQGAICIESRVEDAATLGLLAAIHDRETEIRLTAERAFLAELDGSCR 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + I G A G L GI+L DG HE++R G DA IGR+A + ++ F Sbjct: 241 TPIGGLARIDGDRLSLAGIILRPDGSEAHEIAREGAVADAEAIGREAGRTLKAAGGPGFF 300 >gi|90421073|ref|ZP_01228976.1| porphobilinogen deaminase [Aurantimonas manganoxydans SI85-9A1] gi|90334708|gb|EAS48485.1| porphobilinogen deaminase [Aurantimonas manganoxydans SI85-9A1] Length = 311 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 141/307 (45%), Positives = 190/307 (61%), Gaps = 1/307 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR S LA A A E R+ LM H +P I +ST GDRI +R L+E+GG Sbjct: 1 MASDIIRIGTRGSQLAKAQASEVRARLMAAHDLPEEAFEIEVISTTGDRILDRPLSEVGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE LI G +D A HS+KDM T +GL++SAYLPRED+RD FI TA ++ + Sbjct: 61 KGLFTKEIEAALIDGRVDIAAHSSKDMATASPEGLEVSAYLPREDVRDAFIGRTAATIDE 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IG++SLRR++LL R R D+ VI FRG +++RL KL + A LLA AG+ R+ Sbjct: 121 LPHGATIGSASLRRQSLLKRMRPDLKVITFRGNVQSRLRKLEEGQVDATLLALAGLNRMA 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + V EIL +E F P+PGQGAICI+ + + + LV I T ++ ERAFLAEL Sbjct: 181 MQDVATEILEVERFLPAPGQGAICIQNRIGDERVHGLVAAIADPRTTVALTAERAFLAEL 240 Query: 241 DGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DGSC++ IA A + T+ +G++L DG HE R G DA +GR A + + Sbjct: 241 DGSCRTPIAAHAVLAEDGTVTLHGMILTPDGSRMHETRRTGIAADAEALGRLAGRDVLDA 300 Query: 300 SNKNVFN 306 + F+ Sbjct: 301 AGPGFFD 307 >gi|254473214|ref|ZP_05086612.1| porphobilinogen deaminase [Pseudovibrio sp. JE062] gi|211957935|gb|EEA93137.1| porphobilinogen deaminase [Pseudovibrio sp. JE062] Length = 307 Score = 275 bits (704), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 136/307 (44%), Positives = 195/307 (63%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KP RIGTR S LALA A ETR+ L H + + I+ + T GD+I +R L+E GG Sbjct: 1 MQTKPIRIGTRGSALALAQAHETRARLAKAHGLTDDDFEIVVIKTTGDQIQDRPLSEAGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+ ID AVHS+KDMPT L GL ++AYLPRED+RD FIS + L D Sbjct: 61 KGLFTKEIEEALLDKSIDLAVHSSKDMPTVLPDGLGMTAYLPREDVRDAFISPKVEKLTD 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+G+SSLRR+A + R R D+ V+ +RG ++TRL KL+ A LAYAG++RL Sbjct: 121 LPQGAVVGSSSLRRQAQIKRLRPDLDVVMYRGNLQTRLRKLDEGVVDATFLAYAGLRRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + ++ ++++E F P+ GQGAI IE + + + ++ I+H +T + ERA+LAE+ Sbjct: 181 QGDLVTSLMDLEHFLPAVGQGAIGIEARLGDEETARILAPIHHAETESRLLLERAYLAEM 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG ++ +G + F G V+ DG H V G DA IGR+ + ++ S Sbjct: 241 DGSCRTPIAGLSHVEGDRIKFRGEVIKPDGSQTHTVEGEGPVSDAEEIGRELGKELKAKS 300 Query: 301 NKNVFNF 307 N Sbjct: 301 GPNFLEL 307 >gi|114705601|ref|ZP_01438504.1| porphobilinogen deaminase [Fulvimarina pelagi HTCC2506] gi|114538447|gb|EAU41568.1| porphobilinogen deaminase [Fulvimarina pelagi HTCC2506] Length = 316 Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 138/302 (45%), Positives = 195/302 (64%), Gaps = 1/302 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLALA A E R+ L+ H + + I +ST GDRI +R L+E+GGKGLFT Sbjct: 8 IRIGTRGSPLALAQASEVRARLIAAHGLTEDDFAIEVISTSGDRILDRPLSEVGGKGLFT 67 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L+ ID AVHS+KDM T + GL I+A+L RED+RD FI A++L DL + Sbjct: 68 KEIEAALLDRRIDLAVHSSKDMATAIPDGLAITAFLEREDVRDAFIGRDAKTLADLPEGA 127 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G++SLRR+AL+ R R D++ I FRG ++TRL KL +A A LLA AG+ R++ + Sbjct: 128 TVGSASLRRQALIKRLRPDLNTIIFRGNVQTRLRKLGEGQADATLLALAGLNRMEMQHHA 187 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +IL EDFPP+PGQGAICIE+ + + + LV I H++T +++ ERAFL LDGSC+ Sbjct: 188 TDILEPEDFPPAPGQGAICIESRQGDTRIENLVSAIVHDETSIALHAERAFLKVLDGSCR 247 Query: 246 SAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + IA A S + F+G++L DG HEV G+ A+ +G A + + + + Sbjct: 248 TPIAARAVLWDSGRIAFHGMILRPDGTEVHEVHDEGDADGAVALGERAGRSVLEAAGPHF 307 Query: 305 FN 306 F+ Sbjct: 308 FD 309 >gi|326409887|gb|ADZ66952.1| Porphobilinogen deaminase [Brucella melitensis M28] Length = 277 Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 129/274 (47%), Positives = 180/274 (65%) Query: 33 IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLL 92 +P I I+P+ST GDRI +R L+E+GGKGLFTEEIE+ L G ID AVHS KDMPT L Sbjct: 1 MPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFTEEIEQALKDGRIDIAVHSTKDMPTALP 60 Query: 93 KGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRG 152 +GL +S +L RED RD FI +A+ DL + +G+SSLRR+AL+ R R DI V+ +RG Sbjct: 61 EGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVGSSSLRRQALIRRLRPDIEVVMYRG 120 Query: 153 KIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNP 212 ++TRL KL+ + LA AG++RL VI ++L+ FPP+PGQGAI IE+ + + Sbjct: 121 NVDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDVLDPSVFPPAPGQGAIGIESRIGDE 180 Query: 213 KAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272 + L+ + H +T ++ CERAFL LDGSC++ IAG A +G L F G++L DG+ Sbjct: 181 RIDVLLAPLAHRETQIALACERAFLGALDGSCRTPIAGLATVEGDRLSFRGMILTPDGRQ 240 Query: 273 FHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 HEV+ G DA +G DAA +R ++ + F+ Sbjct: 241 AHEVTAEGVVSDAAALGTDAANRVRAMAGPHFFD 274 >gi|218509456|ref|ZP_03507334.1| porphobilinogen deaminase [Rhizobium etli Brasil 5] Length = 279 Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 132/226 (58%), Positives = 164/226 (72%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A E R LM H +P I+ LSTKGDRIT+R+L EIGG Sbjct: 54 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEEMFEIVVLSTKGDRITDRSLAEIGG 113 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E+KL+SGE+D AVHSAKDMPT L GL +SAYLPREDIRD I TA L D Sbjct: 114 KGLFTEELEQKLVSGELDFAVHSAKDMPTHLPDGLHLSAYLPREDIRDAVIGRTAPKLID 173 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R DI+VI FRG +ETRL KL + A LLA AG+KRL Sbjct: 174 LPHGATVGSSSLRRQALIRRMRPDINVIIFRGSVETRLRKLEEGQVDATLLALAGLKRLG 233 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226 K +V+ +IL+ + FPP+P QGAICIE+ + + + +L+ +N T Sbjct: 234 KVEVLTDILDPDTFPPAPAQGAICIESRIGDTRIDDLLAAVNDAAT 279 >gi|21328661|gb|AAM48667.1| porphobilinogen deaminase [uncultured marine proteobacterium] Length = 316 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 130/268 (48%), Positives = 176/268 (65%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K P IGTR SPLALA A+ETR+ L +P I+ + T GDR+T+R L EIGGKG Sbjct: 9 KTPLNIGTRGSPLALAQAYETRARLAKAFDLPFEAFEIVVIMTTGDRVTDRPLKEIGGKG 68 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT EIE+ ++ G ID AVHS KDMP GL + YLPRED+RD FIS + +L DL+ Sbjct: 69 LFTREIEQAMLDGSIDIAVHSMKDMPVLQPDGLVLDTYLPREDVRDAFISLSGGALSDLS 128 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+A L R D+ V++FRG ++TRL KL N A A LA AG+KRL + Sbjct: 129 PGAVVGTSSLRRQAQLKLRRPDLQVVEFRGNLQTRLKKLENQVAEATFLAMAGLKRLNMD 188 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +V ++ + ++D P+ QGAI IE +N+ + +++ I+ +T + ERAFLA LDG Sbjct: 189 EVPRQAIEVDDMLPAVAQGAIGIERRINDGRMADMLAAIHDRETGQRLAAERAFLAALDG 248 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270 SC++ IAG + +GST+ G VL DG Sbjct: 249 SCETPIAGLSELQGSTMRLRGEVLRPDG 276 >gi|84516581|ref|ZP_01003940.1| porphobilinogen deaminase [Loktanella vestfoldensis SKA53] gi|84509617|gb|EAQ06075.1| porphobilinogen deaminase [Loktanella vestfoldensis SKA53] Length = 314 Score = 258 bits (659), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 133/289 (46%), Positives = 175/289 (60%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 PF IGTR SPLALA A ETR+ LM +P I+ + GD I +R L +IGGKGLF Sbjct: 11 PFNIGTRGSPLALAQAHETRARLMAAFDLPQDAFAIVVIKVMGDAIQDRALKDIGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE L+ G ID AVHS KDMP + GL + YLPRED+RD F+S TA+ L DL Sbjct: 71 TREIEDALLDGSIDIAVHSMKDMPVEQPSGLLLDTYLPREDVRDAFVSLTARGLDDLEHG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR++ LL R D++V++FRG ++TRL KL N A A LA AG+ RL V Sbjct: 131 ATVGTSSLRRRSQLLVRRPDLNVVEFRGNVQTRLMKLGNGVAEATFLAMAGLNRLNMTDV 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + ED P+ QGAI IE ++ +A +++ I+H T + ER+FLA LDGSC Sbjct: 191 PRTAIAPEDMLPAIAQGAIGIERRADDSRAAAMLEAIHHGPTGQRLAAERSFLAHLDGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 ++ I G A G TL G +L +DG G D ++GR+ A Sbjct: 251 QTPIGGLADLDGGTLRLRGEILRTDGSQVLADDMIGAIADGADMGREMA 299 >gi|163733941|ref|ZP_02141383.1| porphobilinogen deaminase [Roseobacter litoralis Och 149] gi|161393052|gb|EDQ17379.1| porphobilinogen deaminase [Roseobacter litoralis Och 149] Length = 314 Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 135/303 (44%), Positives = 181/303 (59%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR SPLA+A AFETR+ LM +P I+ + GD I +R L +IGGKGLF Sbjct: 11 PLKIGTRGSPLAMAQAFETRARLMQAFDLPEDAFSIVVIKVTGDMIQDRALKDIGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE+ L+S +ID AVHS KDMPT GL + YLPRED+RD F+S T + DLA Sbjct: 71 TREIEEDLLSEKIDIAVHSMKDMPTLQPDGLVLDTYLPREDVRDAFVSPTLSGIADLAQG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRRKA LL R D++V++FRG ++TRL KL + A LA AG+ RLK ++V Sbjct: 131 AVVGTSSLRRKAQLLNRRPDLNVVEFRGNVQTRLKKLADGVAECTFLASAGLNRLKMDEV 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + ++ P+ QGAI IE + + +L+ I+H +T + ER+FL LDGSC Sbjct: 191 PATPIEADEMLPAVAQGAIGIERRMADQNTADLLSAIHHIETGQRLTAERSFLLTLDGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A G L G VL DG R+G D +GR AQ + + Sbjct: 251 ETPIAGLAELDGDQLRLRGEVLRPDGSESLAGERSGPIADGAEMGRILAQELLDRAGPKF 310 Query: 305 FNF 307 F + Sbjct: 311 FEW 313 >gi|159045244|ref|YP_001534038.1| porphobilinogen deaminase [Dinoroseobacter shibae DFL 12] gi|157913004|gb|ABV94437.1| porphobilinogen deaminase [Dinoroseobacter shibae DFL 12] Length = 347 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 127/303 (41%), Positives = 183/303 (60%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR S LALA A ETR+ L +P I+ + T GDRI +R+L+EIGGKGLF Sbjct: 40 PLKIGTRGSLLALAQAHETRARLSAAFDLPEEAFEIVVIKTTGDRIQDRSLSEIGGKGLF 99 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE ++ G ID AVHS KDMP GL + YLPRED+RD F++ +L DL Sbjct: 100 TREIEDAMLDGSIDIAVHSMKDMPVDTPAGLALDTYLPREDVRDAFVTLDGGTLADLPEG 159 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+G+SSLRR+A L R D+ +++FRG ++TR+ KL + AHA LA AG+ RL ++V Sbjct: 160 AVVGSSSLRRRAQLAHRRPDLQLVEFRGNVQTRMKKLGDGVAHATFLAMAGLNRLGMDEV 219 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + ED P+ QG I IE ++P+A E++ I+ + + CERA+L+ LDGSC Sbjct: 220 PRSAIAPEDMLPAVAQGCIGIERRADDPRAAEMLAAIHDGPSGHRLACERAYLSALDGSC 279 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A G +++ +L DG S DA +GR+ A+ +R + Sbjct: 280 QTPIAGLAELDGGSIHLRAEILRPDGSEVLSDSETAPVEDAAKMGREVAERLRARAPDGF 339 Query: 305 FNF 307 F++ Sbjct: 340 FSW 342 >gi|255262067|ref|ZP_05341409.1| porphobilinogen deaminase [Thalassiobium sp. R2A62] gi|255104402|gb|EET47076.1| porphobilinogen deaminase [Thalassiobium sp. R2A62] Length = 326 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 134/305 (43%), Positives = 180/305 (59%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + P IGTR SPLALA A+ETR+ L +P I+ + T GDRI +R L EIGGKG Sbjct: 21 QSPLNIGTRGSPLALAQAYETRARLSAAFDLPSEAFTIVVIKTTGDRIIDRPLKEIGGKG 80 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT EIE ++ G+ID AVHS KDMP GL I YLPRED RD FI+ LKDLA Sbjct: 81 LFTREIEDAMLQGDIDIAVHSMKDMPVLQPDGLLIDTYLPREDNRDAFIALDGSGLKDLA 140 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR A L+ R D+++++FRG ++TRL KL + A A LA AG+ RLK + Sbjct: 141 EGATVGTSSLRRHAQLMNRRPDLNIVEFRGNLQTRLKKLGDGVAEATFLAMAGLNRLKMD 200 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V + + +D P+ QGAI IE ++ + E+++ I+ T + ERAFL LDG Sbjct: 201 DVPRTAIETDDMLPAVAQGAIGIERRADDSRMAEMLEAIHDGPTGQRLAAERAFLKALDG 260 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC++ IAG A G LY G VL DG + +G D +GR A + + + Sbjct: 261 SCETPIAGLAELNGGILYLRGEVLRVDGSDTVYDAASGPIEDGAEMGRVMAAKLLAEAGE 320 Query: 303 NVFNF 307 F++ Sbjct: 321 GFFDW 325 >gi|110678608|ref|YP_681615.1| porphobilinogen deaminase [Roseobacter denitrificans OCh 114] gi|109454724|gb|ABG30929.1| porphobilinogen deaminase [Roseobacter denitrificans OCh 114] Length = 314 Score = 254 bits (650), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 136/303 (44%), Positives = 182/303 (60%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR SPLA+A AFETR+ LM +P + I+ + GD I +R L +IGGKGLF Sbjct: 11 PLKIGTRGSPLAMAQAFETRARLMQAFDLPENAFTIVVIKVTGDMIQDRALKDIGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE+ L+S +ID AVHS KDMPT GL + YLPRED+RD FIS T + + DLA Sbjct: 71 TREIEEDLLSEKIDIAVHSMKDMPTLQPDGLILDTYLPREDVRDAFISPTLKGIADLAQG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRRKA LL R D++V++FRG ++TRL KL + A LA AG+ RLK ++V Sbjct: 131 AVVGTSSLRRKAQLLNRRPDLNVVEFRGNVQTRLKKLADGVAECTFLACAGLSRLKMDEV 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + P+ QGAI IE + + EL+ I+ T + ER FL LDGSC Sbjct: 191 PATPIETDHMLPAVAQGAIGIERRIADTNTAELLSAIHDGPTGQRLAAERNFLLTLDGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A G L G VL DG R+G D +GRD A+ + + + Sbjct: 251 ETPIAGLAELSGDHLRLRGEVLRPDGSEALNGERSGPISDGAAMGRDLAEKLLKRAGPSF 310 Query: 305 FNF 307 F++ Sbjct: 311 FDW 313 >gi|332559141|ref|ZP_08413463.1| porphobilinogen deaminase [Rhodobacter sphaeroides WS8N] gi|332276853|gb|EGJ22168.1| porphobilinogen deaminase [Rhodobacter sphaeroides WS8N] Length = 310 Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 133/304 (43%), Positives = 185/304 (60%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGL Sbjct: 6 EPLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT EIE+ L+SG ID AVHS KDMPT +GL + YLPRED RD FI+ L DL Sbjct: 66 FTREIEEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFADGGLADLPQ 125 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK ++ Sbjct: 126 GATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMDE 185 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V + + E+ + QGAI IE ++P+AQE++ I+ T + ER+FL +LDGS Sbjct: 186 VPRVPIEPEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVRTGHRLAAERSFLLKLDGS 245 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C++ IAG A +G L+ G +L DG G DA +G + A + + + Sbjct: 246 CETPIAGLAILEGDQLWLRGEILRPDGSESISGEIRGAIADAAALGSELASELLGRAPAD 305 Query: 304 VFNF 307 F++ Sbjct: 306 FFSW 309 >gi|221640136|ref|YP_002526398.1| porphobilinogen deaminase [Rhodobacter sphaeroides KD131] gi|221160917|gb|ACM01897.1| Porphobilinogen deaminase [Rhodobacter sphaeroides KD131] Length = 310 Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 133/304 (43%), Positives = 184/304 (60%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGL Sbjct: 6 EPLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT EIE+ L+SG ID AVHS KDMPT +GL + YLPRED RD FI+ L DL Sbjct: 66 FTREIEEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFAEGGLADLPQ 125 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK + Sbjct: 126 GATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMNE 185 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V + + E+ + QGAI IE ++P+AQE++ I+ T + ER+FL +LDGS Sbjct: 186 VPRVPIEPEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVPTGHRLAAERSFLLKLDGS 245 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C++ IAG A +G L+ G +L DG G DA +G + A + + + Sbjct: 246 CETPIAGLAILEGDQLWLRGEILRPDGSESISGEIRGAIADAAALGSELASELLGRAPAD 305 Query: 304 VFNF 307 F++ Sbjct: 306 FFSW 309 >gi|149204076|ref|ZP_01881044.1| porphobilinogen deaminase [Roseovarius sp. TM1035] gi|149142518|gb|EDM30563.1| porphobilinogen deaminase [Roseovarius sp. TM1035] Length = 315 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 133/303 (43%), Positives = 184/303 (60%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR SPLALA AFETR+ L +P I+ + T GD+I +R L EIGGKGLF Sbjct: 11 PLKIGTRGSPLALAQAFETRARLGAAFDLPEEAFEIVVIKTTGDQIIDRPLKEIGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE+ +++G+ID AVHS KDMP +GL + YLPRED+RD F+S T SL DL Sbjct: 71 TREIEQAMLTGDIDIAVHSMKDMPVLQPEGLLLDTYLPREDVRDAFVSPTVASLADLPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S++GTSSLRRKA +L + V++FRG ++TRL KL + A LA AG+ RL + +V Sbjct: 131 SLVGTSSLRRKAQVLVAYPHLEVVEFRGNVQTRLKKLEDGVAACTFLAMAGLNRLGRSEV 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ + P+ QGAI IE ++ +A E++ I+H++T + ERAFLA LDGSC Sbjct: 191 ATCAIDADVMLPAVAQGAIGIERRADDTRAAEMLAAIHHKETGQRLVSERAFLAALDGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A GSTL G +L DG ++ D +GR A + + Sbjct: 251 ETPIAGLAELNGSTLRLRGEILRPDGSESLTDDQSAPIEDGAELGRAMAAKLLAQAGPGF 310 Query: 305 FNF 307 F++ Sbjct: 311 FDW 313 >gi|77464252|ref|YP_353756.1| porphobilinogen deaminase [Rhodobacter sphaeroides 2.4.1] gi|77388670|gb|ABA79855.1| Porphobilinogen deaminase [Rhodobacter sphaeroides 2.4.1] Length = 314 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 133/304 (43%), Positives = 184/304 (60%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGL Sbjct: 10 EPLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGL 69 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT EIE+ L+SG ID AVHS KDMPT +GL + YLPRED RD FI+ L DL Sbjct: 70 FTREIEEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFAEGGLADLPQ 129 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK + Sbjct: 130 GATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMNE 189 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V + + E+ + QGAI IE ++P+AQE++ I+ T + ER+FL +LDGS Sbjct: 190 VPRVPIESEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVPTGHRLAAERSFLLKLDGS 249 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C++ IAG A +G L+ G +L DG G DA +G + A + + + Sbjct: 250 CETPIAGLAILEGDQLWLRGEILRPDGSESISGEIRGAIADAAALGSELASELLGRAPAD 309 Query: 304 VFNF 307 F++ Sbjct: 310 FFSW 313 >gi|126463094|ref|YP_001044208.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17029] gi|126104758|gb|ABN77436.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17029] Length = 322 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 133/304 (43%), Positives = 184/304 (60%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGL Sbjct: 18 EPLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGL 77 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT EIE+ L+SG ID AVHS KDMPT +GL + YLPRED RD FI+ L DL Sbjct: 78 FTREIEEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFAEGGLADLPQ 137 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK + Sbjct: 138 GATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMNE 197 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V + + E+ + QGAI IE ++P+AQE++ I+ T + ER+FL +LDGS Sbjct: 198 VPRVPIEPEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVPTGHRLAAERSFLLKLDGS 257 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C++ IAG A +G L+ G +L DG G DA +G + A + + + Sbjct: 258 CETPIAGLAILEGDQLWLRGEILRPDGSESISGEIRGAIADAAALGVELASELLGRAPAD 317 Query: 304 VFNF 307 F++ Sbjct: 318 FFSW 321 >gi|85713686|ref|ZP_01044676.1| porphobilinogen deaminase [Nitrobacter sp. Nb-311A] gi|85699590|gb|EAQ37457.1| porphobilinogen deaminase [Nitrobacter sp. Nb-311A] Length = 316 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 128/272 (47%), Positives = 177/272 (65%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR SPLALA A E R L H++ P I I + T GD I +R L ++GGKGLFT+E Sbjct: 13 IGTRGSPLALAQAHEVRDRLARAHQVAPERIAIKTIRTSGDAIQDRPLFDVGGKGLFTKE 72 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ L++G ID AVHS+KD+PT L + A+LPRED+RDVFIS A SL DL S++ Sbjct: 73 IEEALLAGAIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDVFISPRAASLHDLPAGSIV 132 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+SLRR+A++LR R D+ V RG +ETRL K++ +A A LLA AG+ RL + Sbjct: 133 GTASLRRQAMVLRLRPDLKVNALRGNVETRLRKIDAGEADATLLALAGLNRLGLQDKATR 192 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 IL E+F P+ GQGAI IE+ ++ + VK I +T +++ ER+FLA LDGSC++ Sbjct: 193 ILETEEFLPAVGQGAIAIESRRDDDRINAFVKAIGDSETEVALSAERSFLALLDGSCRTP 252 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 I G G ++F G++++ DG +E +R Sbjct: 253 IGGHCRVNGDRIHFRGLIISPDGTESYETTRE 284 >gi|300024951|ref|YP_003757562.1| porphobilinogen deaminase [Hyphomicrobium denitrificans ATCC 51888] gi|299526772|gb|ADJ25241.1| porphobilinogen deaminase [Hyphomicrobium denitrificans ATCC 51888] Length = 310 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 138/296 (46%), Positives = 181/296 (61%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ RIGTR SPLALA A E R L H + I I + T GDR+T+R L++IGG Sbjct: 1 MQAARIRIGTRGSPLALAQAHEVRDRLAKAHGLSEDAISITIIKTTGDRVTDRPLSDIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE L + EID AVHS KDM T+L GL + A LPRED RD FIS ++ Sbjct: 61 KGLFTKEIEDALFAREIDIAVHSMKDMQTELPDGLALGAVLPREDPRDAFISLKHANISA 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRRK+ +L R D+SVIDFRG +ETRL KL + A A LA AG+ RL Sbjct: 121 LPTGAIVGTSSLRRKSQVLSIRPDLSVIDFRGNVETRLRKLKDGIAEATFLAVAGLNRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I I+ D P+ QGAI +E + +A+ V +N ++ +V ERAFLA L Sbjct: 181 LSDRITAIVPSADMLPAAAQGAIGLEIRTGDKEAEAFVAPLNDVNSQRAVTAERAFLARL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +GSC++ IA A G L F G VL+ DG+ ++VSR+G + +IG AA + Sbjct: 241 EGSCRTPIAAHATIDGEQLSFRGQVLSLDGQQKYDVSRSGAANASRDIGLAAADEV 296 >gi|260425851|ref|ZP_05779830.1| porphobilinogen deaminase [Citreicella sp. SE45] gi|260420343|gb|EEX13594.1| porphobilinogen deaminase [Citreicella sp. SE45] Length = 319 Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 136/308 (44%), Positives = 184/308 (59%), Gaps = 4/308 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIG 59 +P RIGTR SPLALA A ETR L D + P I+ + T GD +R L EIG Sbjct: 10 QPLRIGTRGSPLALAQAHETRDRLCDTFALSPEAFEIVVIRTTGDDRSMIAADRPLKEIG 69 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 KGLFT+EIE++L++G ID AVHS KDMPT +GL + YLPRED+RD FIS L Sbjct: 70 NKGLFTKEIEEQLMTGGIDIAVHSMKDMPTLQPEGLMLDCYLPREDVRDAFISPGHGGLG 129 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A A LA AG+ R+ Sbjct: 130 DLPAGTVVGTSSLRRRAQLLNRRPDLRVVEFRGNLQTRLKKLEDGVAAATFLAMAGLNRM 189 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 ++ ++ ++ P+ QGAI IE ++ +A E++ I+ DT + ERAFLAE Sbjct: 190 GMTQLPMTAMSPDEMLPAVAQGAIGIERRSDDSRAAEMLAAIHDRDTALRLGAERAFLAE 249 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 LDGSC++ IAG A G+ L G +LA DG H G + +GR AQ + Sbjct: 250 LDGSCETPIAGLAELDGTALRLRGELLAPDGSASHAGEIAGPADNGPELGRLLAQQLLAR 309 Query: 300 SNKNVFNF 307 + + F + Sbjct: 310 AGADFFAW 317 >gi|146276603|ref|YP_001166762.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17025] gi|145554844|gb|ABP69457.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17025] Length = 322 Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 130/304 (42%), Positives = 184/304 (60%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGL Sbjct: 18 EPLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGL 77 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT EIE+ L+ G ID AVHS KDMPT +GL + YLPRED RD FI++ L DL Sbjct: 78 FTREIEEALLDGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITYAEGGLADLPQ 137 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK + Sbjct: 138 GATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMDD 197 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V + + E+ + QGAI IE +++P+ QE++ I+ T + ER+FL +LDGS Sbjct: 198 VPRVAIEPEEMLSAVAQGAIGIERRIDDPRTQEMLAAIHDVPTGHRLAAERSFLLKLDGS 257 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C++ IAG A +G ++ G +L DG G DA +G + A + + + Sbjct: 258 CETPIAGLAVLEGDQIWLRGEILRPDGSESISGEIRGGIPDAAALGAELASELLGRAPSD 317 Query: 304 VFNF 307 F++ Sbjct: 318 FFSW 321 >gi|85705298|ref|ZP_01036397.1| porphobilinogen deaminase [Roseovarius sp. 217] gi|85670171|gb|EAQ25033.1| porphobilinogen deaminase [Roseovarius sp. 217] Length = 315 Score = 252 bits (643), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 133/303 (43%), Positives = 184/303 (60%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR SPLALA AFETR+ L +P I+ + T GD+I +R L EIGGKGLF Sbjct: 11 PLKIGTRGSPLALAQAFETRARLGAAFDLPEEVFEIVVIKTTGDQIIDRPLKEIGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE+ L++GEID AVHS KDMP +GL + YLPRED+RD F+S SL DL Sbjct: 71 TREIEQALLTGEIDIAVHSMKDMPVLQPEGLLLDTYLPREDVRDAFVSPLVGSLADLPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +++GTSSLRRKA +L + V++FRG ++TRL KL + A LA AG+ RL + +V Sbjct: 131 ALVGTSSLRRKAQVLVAYPHLQVVEFRGNVQTRLKKLADGVATCTFLAMAGLNRLGRSEV 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ E P+ QGAI IE ++ +A E++ I+H++T + ERAFLA LDGSC Sbjct: 191 ATGAIDPEVMLPAVAQGAIGIERRADDTRAAEMLAAIHHKETGQRLVSERAFLAALDGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A G+TL G +L DG ++ D ++GR A + + Sbjct: 251 ETPIAGLAELNGNTLRLRGEILRPDGSESLTDDQSAPIEDGADLGRAMAAKLLAQAGPGF 310 Query: 305 FNF 307 F++ Sbjct: 311 FDW 313 >gi|254466587|ref|ZP_05079998.1| porphobilinogen deaminase [Rhodobacterales bacterium Y4I] gi|206687495|gb|EDZ47977.1| porphobilinogen deaminase [Rhodobacterales bacterium Y4I] Length = 323 Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 139/310 (44%), Positives = 183/310 (59%), Gaps = 10/310 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIGG 60 P +IGTR SPLALA A+ETRS L +P I+ + T GD ++ L E+GG Sbjct: 15 PLKIGTRGSPLALAQAYETRSRLAAAFDLPQEAFEIVVIRTTGDNQALIAADKPLKELGG 74 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+SG ID AVHS KDMP +GL + YLPRED+RD FIS +SL D Sbjct: 75 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVAQPEGLALDTYLPREDVRDAFISPALKSLHD 134 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LA +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL+ A LA AG+ RL Sbjct: 135 LAEGAVVGTSSLRRRAQLLNRRPDLKVVEFRGNVQTRLRKLSEGVADCTFLAMAGLNRLA 194 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V + D P+ QGAI IE ++ +A E++ I+ +T + ERAFLA L Sbjct: 195 MADVPANPIETSDMLPAVAQGAIGIERRADDGRAAEMLAAIHDGETGLRLAAERAFLAAL 254 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIR 297 DGSC++ IAG A GSTL G VL DG E + C D +GR+ A + Sbjct: 255 DGSCETPIAGLAELHGSTLRLRGEVLRPDG---SESISDDQTCPVEDGAELGREMAAKLL 311 Query: 298 FISNKNVFNF 307 + K F++ Sbjct: 312 EKAGKGFFDW 321 >gi|126732359|ref|ZP_01748159.1| porphobilinogen deaminase [Sagittula stellata E-37] gi|126707228|gb|EBA06294.1| porphobilinogen deaminase [Sagittula stellata E-37] Length = 316 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 137/307 (44%), Positives = 185/307 (60%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIGG 60 P +IGTR SPLALA AFETR LM +P I + T GD +R L EIG Sbjct: 9 PLKIGTRGSPLALAQAFETRERLMAAFSLPEDAFEICIIKTTGDDRAMIAADRPLKEIGN 68 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L++G ID AVHS KDMPT+ +GL + YLPRED RD FI H S+ D Sbjct: 69 KGLFTKEIEEALVAGRIDIAVHSMKDMPTEQPEGLILDCYLPREDPRDAFICHDHGSIHD 128 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +V+G+SSLRR+A LL R D+ V++FRG ++TRL KL++ A A LA AG+ R+K Sbjct: 129 LPVGAVVGSSSLRRRAQLLHRRPDLDVVEFRGNLQTRLKKLSDGVATATFLACAGLNRMK 188 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V + D P+ QGAI IE +++ QE++ I+ DT + ERAFLA L Sbjct: 189 IPGVPMFPIAEVDMLPAIAQGAIGIERRIDDATTQEMLAAIHDHDTGLRLAAERAFLARL 248 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A G+TL+ G +L DG I H +G + +GR A + + Sbjct: 249 DGSCETPIAGLAELDGATLHLRGEILRPDGSISHAGEISGAATEGAALGRTLADDLLSRA 308 Query: 301 NKNVFNF 307 + F++ Sbjct: 309 GEGFFDW 315 >gi|302838564|ref|XP_002950840.1| hypothetical protein VOLCADRAFT_85406 [Volvox carteri f. nagariensis] gi|300263957|gb|EFJ48155.1| hypothetical protein VOLCADRAFT_85406 [Volvox carteri f. nagariensis] Length = 355 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 142/312 (45%), Positives = 196/312 (62%), Gaps = 11/312 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN----IVIIPLSTKGDRITNRTLTEIG 59 K +IGTR SPLALA A+ TR L P N + I+ + T GD+I N+ L +IG Sbjct: 47 KTVKIGTRGSPLALAQAYLTRDLLK--KNFPELNEEGALEIVIIKTTGDKILNQPLADIG 104 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLFT+EI+ L+ G+ID AVHS KD+PT L +G + LPRED+RDVFIS TA+ L Sbjct: 105 GKGLFTKEIDDALLGGKIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDVFISPTAKDLS 164 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +V+G++SLRR+A +L + V +FRG ++TRL KLN A LLA AG+KRL Sbjct: 165 ELPAGAVVGSASLRRQAQILAKYPHLKVENFRGNVQTRLRKLNEGACSATLLALAGLKRL 224 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I +IL+IE+ P+ QGAI I + +++L+ +NHE+T +V CERAFLA Sbjct: 225 DMTAHITKILSIEEMLPAVSQGAIGIACRTQDDASRKLLAALNHEETRIAVVCERAFLAA 284 Query: 240 LDGSCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQY 295 LDGSC++ IAG+A+ KGS L+F G+V DGK SR + DA+ G DA + Sbjct: 285 LDGSCRTPIAGYAH-KGSDGQLHFSGLVATPDGKQMMRTSRVASFTDADAVKAGEDAGRE 343 Query: 296 IRFISNKNVFNF 307 ++ K +F + Sbjct: 344 LKATGPKELFMY 355 >gi|323136449|ref|ZP_08071531.1| porphobilinogen deaminase [Methylocystis sp. ATCC 49242] gi|322398523|gb|EFY01043.1| porphobilinogen deaminase [Methylocystis sp. ATCC 49242] Length = 308 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 133/296 (44%), Positives = 178/296 (60%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RIGTR SPLALA R++L H + + I + T GD+I +R L+E GG Sbjct: 1 MTVRSLRIGTRGSPLALAQTHMIRAALAQAHGVAEDHFAIEIIKTTGDQIQDRPLSESGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E++ LI+G+ID AVHS+KD+PT L + I+ YLPRED RD +I +L Sbjct: 61 KGLFTKELDSALIAGDIDLAVHSSKDLPTHLPAEIVIAGYLPREDARDAWIGRNGVTLDQ 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT+SLRR A + R R D+ RG + TRLNK+ + A LLA AG+KRL Sbjct: 121 LPAGAVVGTASLRRAAQVKRLRPDVQTTLLRGNVHTRLNKVERGEIDATLLALAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +L ++DFPP+ GQGAI I + N+P+ + + + E T ++ ERAFLA L Sbjct: 181 LADRATALLPLDDFPPAVGQGAIGITSRANDPETRAALAPLLDEATALALLAERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 DGSC++ IAG A K L FYG VL +DG V R+G DA IG DA I Sbjct: 241 DGSCRTPIAGHATVKDGDLTFYGEVLKADGSEVWIVRRHGRAIDAAMIGADAGNEI 296 >gi|75674669|ref|YP_317090.1| porphobilinogen deaminase [Nitrobacter winogradskyi Nb-255] gi|123745784|sp|Q3SVF3|HEM3_NITWN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|74419539|gb|ABA03738.1| porphobilinogen deaminase [Nitrobacter winogradskyi Nb-255] Length = 316 Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 126/272 (46%), Positives = 176/272 (64%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR SPLALA A E R L H++ P I I + T GD I +R L ++GGKGLFT+E Sbjct: 13 IGTRGSPLALAQAHEVRDRLARAHQVAPERIAIKTIRTSGDAIQDRPLFDVGGKGLFTKE 72 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ L++G ID AVHS+KD+PT L + A+LPRED+RDVFIS A SL DL + + Sbjct: 73 IEEALLAGTIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDVFISPHAGSLNDLPAGATV 132 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+SLRR+A++L+ R D+ V RG +ETRL K++ +A A LLA AG+ RL + Sbjct: 133 GTASLRRQAMVLKLRPDLKVNSLRGNVETRLRKISVGEADATLLALAGLNRLGLQDKATR 192 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 IL ++F P+ GQGAI IE+ ++ + VK I +T +++ ER+FLA LDGSC++ Sbjct: 193 ILETDEFLPAVGQGAIAIESRRDDDRINAFVKAIGDPETEVALSAERSFLALLDGSCRTP 252 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 I G G + F G++++ DG F+E +R Sbjct: 253 IGGHCRVNGDRIDFRGLIISPDGTEFYETTRE 284 >gi|92116183|ref|YP_575912.1| porphobilinogen deaminase [Nitrobacter hamburgensis X14] gi|123387219|sp|Q1QQP5|HEM3_NITHX RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|91799077|gb|ABE61452.1| porphobilinogen deaminase [Nitrobacter hamburgensis X14] Length = 316 Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 127/272 (46%), Positives = 175/272 (64%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LALA A E R L H++ P IVI + T GD I +R L ++GGKGLFT+E Sbjct: 13 IGTRGSALALAQANEVRDRLARAHQVAPERIVIKTIRTSGDAIQDRPLFDVGGKGLFTKE 72 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ L++G ID AVHS+KD+PT L + A+LPRED+RD FIS A SL DL S++ Sbjct: 73 IEEALLAGSIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDAFISPRAASLNDLPAGSIV 132 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+SLRR+A++LR R D+ V RG +ETRL KL +A A LLA AG+ RL + Sbjct: 133 GTASLRRQAMVLRLRPDLKVSVIRGNVETRLRKLVAGEADATLLALAGLNRLGLQDRATR 192 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 IL ++F P+ GQGAI IE+ ++ + VK I +T +++ ER+FLA LDGSC++ Sbjct: 193 ILETDEFLPAVGQGAIAIESRRDDDRINAFVKAIGDSETEVALSAERSFLALLDGSCRTP 252 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 I G G ++F G++++ DG +E +R Sbjct: 253 IGGHCRVNGDRIHFRGLIISPDGTQSYETTRE 284 >gi|254474607|ref|ZP_05087993.1| porphobilinogen deaminase [Ruegeria sp. R11] gi|214028850|gb|EEB69685.1| porphobilinogen deaminase [Ruegeria sp. R11] Length = 320 Score = 248 bits (633), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 135/310 (43%), Positives = 183/310 (59%), Gaps = 10/310 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIGG 60 P +IGTR SPLALA A+ETR+ L +P I+ + T GD ++ L E+GG Sbjct: 12 PLKIGTRGSPLALAQAYETRARLAAAFDLPDDAFEIVVIKTTGDNQALIAADKPLKELGG 71 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+SG ID AVHS KDMP + GL + YLPRED+RD FIS + S+ D Sbjct: 72 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVQQPDGLVLDTYLPREDVRDAFISPSLTSIHD 131 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LA +V+GTSSLRR+A LL R D++V+ FRG ++TRL KL+ A LA AG+ RL Sbjct: 132 LAKGAVVGTSSLRRRAQLLHRRPDLNVVQFRGNVQTRLRKLSEGVAECTFLAMAGLNRLA 191 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V + D P+ QGAI IE ++ +A +++ I+ + T + ERAFLA L Sbjct: 192 MADVPANAIETNDMLPAVAQGAIGIERRTSDNRAADMLAAIHDQQTGQRLAAERAFLAAL 251 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIR 297 DGSC++ IAG A G+TL G VL DG E + RC D +GR A + Sbjct: 252 DGSCETPIAGLAELDGTTLRLRGEVLRPDGS---EAISDDQRCPIEDGAELGRAMAAKLL 308 Query: 298 FISNKNVFNF 307 + + F++ Sbjct: 309 DQAGEGFFDW 318 >gi|126725997|ref|ZP_01741839.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2150] gi|126705201|gb|EBA04292.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2150] Length = 313 Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 128/291 (43%), Positives = 177/291 (60%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + P +IGTR SPLALA A ETR L H + P I+ + T GD + +R L EIGGKG Sbjct: 7 QSPLKIGTRGSPLALAQAHETRDRLSKAHNLAPEAFEIVVIKTTGDIVQDRPLKEIGGKG 66 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+EIE+ ++SG+ID AVHS KDMP + GL I+ YLPRED+RD F+S +A S DL Sbjct: 67 LFTKEIEEAMLSGDIDIAVHSMKDMPVEQPDGLAITCYLPREDVRDAFVSLSADSFDDLR 126 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +G+SSLRR+A L R D+++++FRG ++TR+ KL + A A LA AG+ RL Sbjct: 127 QGATVGSSSLRRRAQLAHRRPDLNLVEFRGNVQTRMRKLGDGVADATFLAMAGLIRLGMS 186 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V + L + F P+ QGAI IE + + E++ I+ + T D + ERAFLA ++G Sbjct: 187 DVARLPLETDVFLPAVAQGAIGIEQRIGDSVISEMLTAIHDQHTGDLLAAERAFLARVEG 246 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 SC++ IAG A L+F +L DG + +G D IGR A Sbjct: 247 SCQTPIAGLAEIIDGKLHFRAEILRPDGSEAITGAASGEIADGAAIGRQVA 297 >gi|323451650|gb|EGB07526.1| hypothetical protein AURANDRAFT_27306 [Aureococcus anophagefferens] Length = 333 Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 133/312 (42%), Positives = 190/312 (60%), Gaps = 7/312 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-----NIVIIPLSTKGDRITNRTL 55 +E P RIGTR SPLALA A+ TR LM P I + + T+GD I ++ L Sbjct: 15 LEATPLRIGTRGSPLALAQAYMTRELLM--KNFPEELGGEGAIQLCIMKTQGDMILDKAL 72 Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115 +EIGGKGLFT+E++ L+ E+D VHS KD+PT L + L RED RDVFIS TA Sbjct: 73 SEIGGKGLFTKELDVALLGDEVDICVHSMKDVPTWLPAKTVLPCMLEREDTRDVFISPTA 132 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 +SLKDL SVIG++SLRR++ +L + ++FRG ++TRL KL+ A LLAYAG Sbjct: 133 KSLKDLKDGSVIGSASLRRQSQILAINPTLKCVNFRGNVQTRLRKLDEGVVDATLLAYAG 192 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 +KR+ + +L ++ P+ QGAI I+ ++ +A + + +NHE+T+ V+CERA Sbjct: 193 LKRMDMADEVTAVLEWDEMLPAVAQGAIGIQCRDDDARALKYIAALNHEETFTCVSCERA 252 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 FLA LDG+CK+ IAG A L F G+V + DG+ + ++ G DA IGR+A + Sbjct: 253 FLAALDGNCKTPIAGQARIVDGELLFDGLVSSLDGQQMYRATKTGAPADAEKIGREAGEG 312 Query: 296 IRFISNKNVFNF 307 I+ + F + Sbjct: 313 IKAEAGIEFFEW 324 >gi|2495180|sp|Q43082|HEM3_PEA RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase; Flags: Precursor gi|313724|emb|CAA51820.1| hydroxymethylbilane synthase [Pisum sativum] Length = 369 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 142/307 (46%), Positives = 190/307 (61%), Gaps = 6/307 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR LM H I I+ + T GD+I ++ L +IGGKGL Sbjct: 62 IRIGTRGSPLALAQAHETRDKLMASHTELAEEGAIQIVIIKTTGDKILSQPLADIGGKGL 121 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A SL DL Sbjct: 122 FTKEIDEALINGDIDIAVHSMKDVPTYLPEETILPCNLPREDVRDAFISLSAASLADLPA 181 Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SVIGT+SLRRK+ +L ++V D FRG ++TRL KL+ A LLA AG+KRL Sbjct: 182 GSVIGTASLRRKSQILHRYPSLTVQDNFRGNVQTRLRKLSEGVVKATLLALAGLKRLNMT 241 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + L+I+D P+ QGAI I N+ K E + +NHE+T +++CERAFL LDG Sbjct: 242 ENVTSTLSIDDMLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAISCERAFLTTLDG 301 Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFI 299 SC++ IAG+A K F G+V + DG E SR G+ D + IG+DA + + Sbjct: 302 SCRTPIAGYASRDKDGNCLFRGLVASPDGTRVLETSRIGSYTYEDMMKIGKDAGEELLSR 361 Query: 300 SNKNVFN 306 + FN Sbjct: 362 AGPGFFN 368 >gi|83952840|ref|ZP_00961570.1| porphobilinogen deaminase [Roseovarius nubinhibens ISM] gi|83835975|gb|EAP75274.1| porphobilinogen deaminase [Roseovarius nubinhibens ISM] Length = 304 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 131/302 (43%), Positives = 183/302 (60%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR SPLALA A+ETR L+ +P I+ ++T GDR+ +R L EIGGKGLFT Sbjct: 1 MKIGTRGSPLALAQAYETRDRLVAAFDLPETAFEIVIITTTGDRVIDRPLKEIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EIE L++G+ID AVHS KDMP +GL I YLPRED+RD FI T ++L ++A + Sbjct: 61 REIEDALLTGDIDLAVHSMKDMPVLQPEGLIIDCYLPREDVRDAFICPTGRNLSEMAPGT 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G+SSLRR+A +L + V++FRG ++TRL KL+ A LA AG+ RLK+ +VI Sbjct: 121 KVGSSSLRRRAQVLVAHPQLEVVEFRGNVQTRLRKLDEGVAACTFLAMAGLNRLKRTEVI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L E+ P+ QGAI IE ++ A +++ I+H T + ERAFLA LDGSC+ Sbjct: 181 TRALEPEEMLPAVAQGAIGIERRRDDSGAAMMLEAIHHGPTGQRLAAERAFLAALDGSCE 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG A +G TL G +L DG R+ D +GR A + + + F Sbjct: 241 TPIAGLAELQGGTLRLRGEILRPDGSERLCDDRSAPVEDGAELGRAMAVDLLAQAGPDFF 300 Query: 306 NF 307 ++ Sbjct: 301 DW 302 >gi|255558669|ref|XP_002520359.1| porphobilinogen deaminase, putative [Ricinus communis] gi|223540457|gb|EEF42025.1| porphobilinogen deaminase, putative [Ricinus communis] Length = 372 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 141/307 (45%), Positives = 188/307 (61%), Gaps = 6/307 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR LM H I I+ + T GD+I + L +IGGKGL Sbjct: 65 IRIGTRGSPLALAQAHETRDKLMAKHSELAEEGAIQIVIIKTTGDKILTQPLADIGGKGL 124 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+GEID AVHS KD+PT L + + LPRED+RD FIS +A SL +L Sbjct: 125 FTKEIDEALINGEIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSASSLAELPS 184 Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SVIGT+SLRRK+ +L +SV++ FRG ++TRL KLN A LLA AG+KRL Sbjct: 185 GSVIGTASLRRKSQILHRYPSLSVLENFRGNVQTRLRKLNEGVVQATLLALAGLKRLNMT 244 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + +L+I+D P+ QGAI I N+ K + +NHE+T +V CERAFL LDG Sbjct: 245 ENVTSVLSIDDMLPAVAQGAIGIACRSNDDKMANYLASLNHEETRLAVACERAFLETLDG 304 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFI 299 SC++ IAG+A + F G+V + DG E SR G D I +G+DA + + Sbjct: 305 SCRTPIAGYASKDENGDCIFKGLVASPDGTRVLETSRKGPYALDDMIMMGKDAGKELLLQ 364 Query: 300 SNKNVFN 306 + F+ Sbjct: 365 AGPGFFD 371 >gi|126733455|ref|ZP_01749202.1| porphobilinogen deaminase [Roseobacter sp. CCS2] gi|126716321|gb|EBA13185.1| porphobilinogen deaminase [Roseobacter sp. CCS2] Length = 311 Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 129/285 (45%), Positives = 170/285 (59%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 PF IGTR SPLALA A ETRS LM +P I + GD I +R L EIGGKGLF Sbjct: 11 PFNIGTRGSPLALAQAHETRSRLMAAFNLPEEAFAICVIKVTGDAIQDRPLKEIGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE+ L+ G ID AVHS KDMP GL + YLPRED+RD F+S A SL DLA Sbjct: 71 TREIEEALLDGSIDIAVHSMKDMPVDQPGGLLLDTYLPREDVRDAFVSLNASSLNDLAEG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR++ LL R D+++++FRG ++TRL KL + A A LA AG+ RL V Sbjct: 131 ATVGTSSLRRRSQLLAKRPDLNIVEFRGNVQTRLKKLGDGVAEATFLAMAGLNRLHMTDV 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + ED P+ QGAI IE ++ +A ++ I+ T + ER+FLA LDGSC Sbjct: 191 PRTAVAPEDMLPAVAQGAIGIERRGDDSRAAAMLDAIHDHATGRRLAAERSFLAALDGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 ++ I G A G ++ G +L +DG +G+ D +G Sbjct: 251 ETPIGGLAELDGGSIRLRGEILRTDGTEVFADDMSGSIEDGPAMG 295 >gi|148909210|gb|ABR17705.1| unknown [Picea sitchensis] Length = 373 Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 135/306 (44%), Positives = 191/306 (62%), Gaps = 5/306 (1%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR SPLALA A+ETR L H + II + T GD+I N+ L +IGGKGLF Sbjct: 68 RIGTRGSPLALAQAYETRDKLKSAHPELAEEGAVEIIIIKTTGDKILNQPLADIGGKGLF 127 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+EI+ L+ G+ID AVHS KD+PT L G + LPRED+RDVFI TA SL +L Sbjct: 128 TKEIDDALLGGKIDIAVHSMKDVPTYLPSGTILPCNLPREDVRDVFICPTAGSLAELQAG 187 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S++G++SLRR++ +L + VI+FRG ++TRL KL + HA LLA+AG+KRL + Sbjct: 188 SIVGSASLRRQSQILYRYPSLKVINFRGNVQTRLRKLKEGEVHATLLAFAGLKRLGMIQH 247 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + +L+ E+ P+ QGAI I N+ K + + +NHE+T +V CERAFL LDGSC Sbjct: 248 VTCLLSTEEMLPAIAQGAIGIACRSNDDKMADYLAALNHEETRLAVACERAFLETLDGSC 307 Query: 245 KSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFISN 301 ++ IAG+A+ K F G++ + DG E SR G D +++G DA + ++ + Sbjct: 308 RTPIAGYAFRDKDGFCSFRGLIASPDGTRVLETSRKGAYTHEDMVSMGVDAGKELKERAG 367 Query: 302 KNVFNF 307 F++ Sbjct: 368 PAFFDW 373 >gi|116793769|gb|ABK26871.1| unknown [Picea sitchensis] Length = 373 Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 135/306 (44%), Positives = 191/306 (62%), Gaps = 5/306 (1%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR SPLALA A+ETR L H + II + T GD+I N+ L +IGGKGLF Sbjct: 68 RIGTRGSPLALAQAYETRDKLKSAHPELAEEGAVEIIIIKTTGDKILNQPLADIGGKGLF 127 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+EI+ L+ G+ID AVHS KD+PT L G + LPRED+RDVFI TA SL +L Sbjct: 128 TKEIDDALLGGKIDIAVHSMKDVPTYLPSGTILPCNLPREDVRDVFICPTAGSLAELQAG 187 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S++G++SLRR++ +L + VI+FRG ++TRL KL + HA LLA+AG+KRL + Sbjct: 188 SIVGSASLRRQSQILYRYPSLKVINFRGNVQTRLRKLKEGEVHATLLAFAGLKRLGMIQH 247 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + +L+ E+ P+ QGAI I N+ K + + +NHE+T +V CERAFL LDGSC Sbjct: 248 VTCLLSTEEMLPAIAQGAIGIACRSNDDKMADYLAALNHEETRLAVACERAFLETLDGSC 307 Query: 245 KSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFISN 301 ++ IAG+A+ K F G++ + DG E SR G D +++G DA + ++ + Sbjct: 308 RTPIAGYAFRDKDGFCSFRGLIASPDGTRVLETSRKGAYTYEDMVSMGVDAGKELKERAG 367 Query: 302 KNVFNF 307 F++ Sbjct: 368 PAFFDW 373 >gi|99082369|ref|YP_614523.1| porphobilinogen deaminase [Ruegeria sp. TM1040] gi|99038649|gb|ABF65261.1| porphobilinogen deaminase [Ruegeria sp. TM1040] Length = 318 Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 133/306 (43%), Positives = 181/306 (59%), Gaps = 5/306 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIGG 60 P +IGTR SPLALA A+ETR L ++ P I+ + T GD +R L EIG Sbjct: 11 PLKIGTRGSPLALAQAYETRDRLARAFELEPTAFDIVVIKTTGDNRAMIDADRPLKEIGN 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+SG ID AVHS KDMPT +GL + YLPRED+RD F+S S+ D Sbjct: 71 KGLFTKEIEEALLSGGIDIAVHSMKDMPTLQPEGLTLDCYLPREDVRDAFVSPGIHSIAD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL N A A LA AG++RL Sbjct: 131 LPEGAVVGTSSLRRRAQLLHRRPDLQVVEFRGNVQTRLQKLENGVASATFLAMAGLRRLD 190 Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E V ++++D P+ QGAI IE ++ +++ I+H +T + ERAFLA Sbjct: 191 MAEAVPATPISVDDMLPAVAQGAIGIERRSSDITTAAMLEAIHHAETSLRLAAERAFLAA 250 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 LDGSC++ IA A G T+ G +L DG ++G D +GR + +R Sbjct: 251 LDGSCETPIAALADLSGGTIQLRGQILRPDGSEALSDEQDGAIEDGAELGRQMGETLRAR 310 Query: 300 SNKNVF 305 + F Sbjct: 311 AGAGFF 316 >gi|46201306|ref|ZP_00208053.1| COG0181: Porphobilinogen deaminase [Magnetospirillum magnetotacticum MS-1] Length = 315 Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 132/304 (43%), Positives = 181/304 (59%), Gaps = 2/304 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA ETR L I I + T GD I +R L EIGGKGL Sbjct: 8 LRIGTRGSPLALAQTHETRDRLAAAWAPLGQEGAIDIEVIKTTGDLIQDRPLAEIGGKGL 67 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+++ ++SG I AVHS KD+PT L G+ + LPRED+RD FIS A SL DL Sbjct: 68 FTKELDEAMLSGRIHLAVHSMKDVPTLLPDGIVLPCILPREDVRDAFISLKAASLADLPQ 127 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR A +L R D+ V++FRG ++TRL KL+ A +LA AG++RL Sbjct: 128 GAVVGTSSLRRGAQILHRRPDLKVVNFRGNVQTRLRKLDEGVVDATMLAMAGLRRLGLAG 187 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + L+ +D P+ QGAI I ++ A + +N D++ V ERAFL LDGS Sbjct: 188 HVTSALSEDDMLPAVAQGAIGITCRADDEAAHAFLAALNCPDSFVRVAAERAFLTRLDGS 247 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C++ IA A G L F G++++ DG H SR+G+R DA +G+DAA+ + ++ Sbjct: 248 CRTPIAALAVLDGDHLSFRGLIVSPDGTAIHATSRSGSRSDAEAMGKDAAEELIKVAGPG 307 Query: 304 VFNF 307 F+ Sbjct: 308 FFDL 311 >gi|255640018|gb|ACU20300.1| unknown [Glycine max] Length = 356 Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 143/308 (46%), Positives = 189/308 (61%), Gaps = 8/308 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A+ETR LM H I I+ + T GD+I + L +IGGKGL Sbjct: 49 IRIGTRGSPLALAQAYETRDKLMASHPDLAEEGAIEIVIIKTTGDKILTQPLADIGGKGL 108 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ L++ EID AVHS KD+PT L + LPRED+RD FIS TA SL DL Sbjct: 109 FTKEIDEALLNSEIDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLTAASLADLPP 168 Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SVIGT+SLRRK+ +L ++V + FRG ++TRL KLN A LLA AG+KRL Sbjct: 169 ASVIGTASLRRKSQILHRYPSLNVQENFRGNVQTRLRKLNEGVVQATLLALAGLKRLSMT 228 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + IL+I+D P+ QGAI I ++ K E + +NHE+T +V CERAFL LDG Sbjct: 229 ENVTSILSIDDMLPAVAQGAIGIACRSDDDKMAEYIDSLNHEETRLAVVCERAFLQTLDG 288 Query: 243 SCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRF 298 SC++ IAG+A C+ F G+V + DG E SR G D I +G+DA + + Sbjct: 289 SCRTPIAGYA-CRNEDGNCLFRGLVASPDGTRVLETSRVGPYAVEDMIEMGKDAGKELLS 347 Query: 299 ISNKNVFN 306 + N F+ Sbjct: 348 RAGPNFFS 355 >gi|310815397|ref|YP_003963361.1| porphobilinogen deaminase [Ketogulonicigenium vulgare Y25] gi|308754132|gb|ADO42061.1| porphobilinogen deaminase [Ketogulonicigenium vulgare Y25] Length = 314 Score = 245 bits (625), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 132/304 (43%), Positives = 176/304 (57%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P RIGTR SPLALA A+ETR L +P I + GD + ++ L EIGGKGL Sbjct: 10 QPLRIGTRGSPLALAQAYETRDRLAQAFALPHEAFQIEVIKVTGDMVQDKALREIGGKGL 69 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT EIE L+ G ID AVHS KDMP + GL + YLPRED+RD F+S +L D+ Sbjct: 70 FTREIEDALLDGSIDIAVHSMKDMPVEQPAGLLLDCYLPREDVRDAFVSLHGWTLADVPA 129 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 VIGTSSLRR+A +L R D++V++FRG ++TRL KL+ A A LA AG+ RL++ Sbjct: 130 GKVIGTSSLRRRAQILARRPDLTVVEFRGNVQTRLKKLDEGVADATFLAMAGLNRLQRGD 189 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V + L +E P+ QGAI IE ++ + ++ VI+ T + ERAFLA LDGS Sbjct: 190 VPLKALEVEQMLPAVAQGAIGIERRADDRIIEGMLAVIHDGPTGVRLAAERAFLAGLDGS 249 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C + IAG A G + G VL DG G DA IG + A+ +R ++ + Sbjct: 250 CHTPIAGLAEIIGDQIRLRGEVLRPDGSEAICDDMRGAAVDAAQIGAEMARKLRGLAGEG 309 Query: 304 VFNF 307 F Sbjct: 310 FFTL 313 >gi|168059289|ref|XP_001781636.1| predicted protein [Physcomitrella patens subsp. patens] gi|162666950|gb|EDQ53592.1| predicted protein [Physcomitrella patens subsp. patens] Length = 393 Score = 245 bits (625), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 134/305 (43%), Positives = 187/305 (61%), Gaps = 4/305 (1%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR SPLALA A++TR L H + I+ + T GD+I ++ L +IGGKGLF Sbjct: 89 RIGTRGSPLALAQAYQTRDKLKAAHPELAEEGALEIVIIKTTGDKILSQPLADIGGKGLF 148 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+EI+ L++G+ID AVHS KD+PT L +G + LPRED+RD FI SL +L Sbjct: 149 TKEIDDALLNGDIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICPNYSSLAELPEG 208 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SV+G++SLRR++ LL + V++FRG ++TRL KL+ A LLA AG+KRL + Sbjct: 209 SVVGSASLRRQSQLLHKYPHLKVVNFRGNVQTRLRKLSEGTVQATLLALAGLKRLDMTEH 268 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + IL+ +D P+ QGAI I + K +E + +NHEDT +V CERAFLA+LDGSC Sbjct: 269 VTTILDTDDMLPAIAQGAIGIACRTGDTKMEEYLSSLNHEDTRLAVACERAFLAKLDGSC 328 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFISNK 302 ++ IAG A F G+V +DGK E SR G+ D I + +DA Q + + Sbjct: 329 RTPIAGLAQRTDDGCSFRGLVATTDGKQVLETSRKGSFFYDDMIALAQDAGQELISRAGP 388 Query: 303 NVFNF 307 + F + Sbjct: 389 DFFEW 393 >gi|126740632|ref|ZP_01756319.1| porphobilinogen deaminase [Roseobacter sp. SK209-2-6] gi|126718433|gb|EBA15148.1| porphobilinogen deaminase [Roseobacter sp. SK209-2-6] Length = 319 Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 133/310 (42%), Positives = 180/310 (58%), Gaps = 10/310 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIGG 60 P +IGTR SPLALA A+ETR+ L +P I+ + T GD ++ L E+GG Sbjct: 11 PLKIGTRGSPLALAQAYETRARLAKAFDLPQEAFEIVVIKTTGDNQALIAADKPLKELGG 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+SG ID AVHS KDMP +GL + YLPRED+RD F+S L+D Sbjct: 71 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVLQPEGLLLDCYLPREDVRDAFVSPKFSRLQD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LA +V+GTSSLRR+A L+ R D+ V++FRG ++TRL KL + A LA AG+ RL Sbjct: 131 LAAGAVVGTSSLRRRAQLMNRRPDLKVVEFRGNVQTRLKKLEDGVAECTFLAMAGLNRLA 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E V + D P+ QGAI IE ++ + +++ I+ + T + ERAFLA L Sbjct: 191 MESVPATAIETTDMLPAVAQGAIGIERRSDDSRVAAMLEAIHDKATGQRLAAERAFLAAL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIR 297 DGSC++ IAG A G TL G VL DG E C D +GRD A + Sbjct: 251 DGSCETPIAGLAELDGGTLRMRGEVLRPDG---SEAIAEDQSCAIEDGAALGRDMAAKLL 307 Query: 298 FISNKNVFNF 307 + + F++ Sbjct: 308 DQAGPSFFDW 317 >gi|259417591|ref|ZP_05741510.1| porphobilinogen deaminase [Silicibacter sp. TrichCH4B] gi|259346497|gb|EEW58311.1| porphobilinogen deaminase [Silicibacter sp. TrichCH4B] Length = 318 Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 135/310 (43%), Positives = 184/310 (59%), Gaps = 11/310 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIGG 60 P +IGTR SPLALA A+ETR L ++ P I+ + T GD +R L EIG Sbjct: 11 PLKIGTRGSPLALAQAYETRDRLARAFELEPTAFDIVVIKTTGDNRAMIDADRPLKEIGN 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L SG ID AVHS KDMPT+ +GL + YLPRED+RD F+S +++ D Sbjct: 71 KGLFTKEIEEALTSGGIDLAVHSMKDMPTEQPEGLMLDCYLPREDVRDAFVSPQIRAIAD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A A LA AG++RL Sbjct: 131 LPEGAVVGTSSLRRRAQLLHRRPDLQVVEFRGNVQTRLQKLQDGVASATFLAMAGLRRLN 190 Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E+V + ED P+ QGAI IE ++ A +++ I+H +T + ERAFLA Sbjct: 191 MAEEVPATPIAPEDMLPAVAQGAIGIERRSDDTTAAAMLEAIHHAETSLRLAAERAFLAA 250 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYI 296 LDGSC++ IA A G TL G +L DG E + C D +GR + + Sbjct: 251 LDGSCETPIAALADLSGGTLQLRGQILRPDGS---EALADQQSCAIEDGAELGRRMGEAL 307 Query: 297 RFISNKNVFN 306 R + + F+ Sbjct: 308 RARAGEGFFS 317 >gi|298707417|emb|CBJ30046.1| hydroxymethylbilane synthase, putative chloroplast precursor [Ectocarpus siliculosus] Length = 373 Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 128/292 (43%), Positives = 189/292 (64%), Gaps = 2/292 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMD-VHKIPPHNIVIIP-LSTKGDRITNRTLTEIGGKGLFT 65 IGTR SPLALA A+ETR L + ++ V I + T GD I ++ LTEIGGKGLFT Sbjct: 61 IGTRGSPLALAQAYETRKRLGEQFDELKEEGAVAIQVIKTSGDMILDKPLTEIGGKGLFT 120 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ +L++ ++D VHS KD+PT ++ G + LPRED D FIS+ A ++ L S Sbjct: 121 KELDVQLLNKDVDICVHSMKDVPTWIVPGTILPCNLPREDTSDAFISNKADNIASLPDGS 180 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIG++SLRR+A LLR V++FRG ++TRL KL+ A LLA+AG+KRL+ +V Sbjct: 181 VIGSASLRRQAQLLRANPTFKVVNFRGNVQTRLRKLDEEIVDATLLAFAGLKRLEMAQVA 240 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +L+ + P+ QGAI I+ N+P ++ + + H++T +V+CERAFLA LDG+CK Sbjct: 241 TSVLDQDAMLPAVAQGAIGIQCRENDPTFEKYLAGLCHQETKTAVDCERAFLAALDGNCK 300 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + IAG A +G L F G++ + DGK F++ +R G DA+ +G DA ++ Sbjct: 301 TPIAGQARMEGEKLVFRGLIASPDGKQFYDTTREGKPEDAVAMGHDAGMELK 352 >gi|19849543|gb|AAL12220.1| porphobilinogen deaminase [Triticum aestivum] Length = 308 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 131/305 (42%), Positives = 188/305 (61%), Gaps = 5/305 (1%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR SPLALA A +TR L H + I I+ + T GD I ++ L +IGGKGLF Sbjct: 1 RIGTRGSPLALAQARQTRDELKAAHTELAEDGAIEIVIIKTTGDMILDKPLADIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+EI+ L+ G ID AVHS KD+PT L +G+ + LPRED+RD FI TA++L +L Sbjct: 61 TKEIDDALLQGSIDIAVHSMKDVPTYLPEGMILPCNLPREDVRDAFICLTAKTLGELPAG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SVI ++SLRR++ +L + V++FRG ++TRL KL HA LLA AG+KRL + Sbjct: 121 SVIASASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLGMPET 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 +L++++ P+ QGAI I N+ K E + +NHEDT +V CER FL+ LDG+C Sbjct: 181 ATSVLSVDEMLPAVAQGAIGITCRSNDDKMMEYLSSLNHEDTRLAVACEREFLSVLDGNC 240 Query: 245 KSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFISN 301 ++ IA +AY K F G++ + DG I +E SR+G D + +G+DA ++ + Sbjct: 241 RTPIAAYAYRDKDGNCSFRGLLASPDGSIVYETSRSGTYSFDDMVALGQDAGHELKSKAG 300 Query: 302 KNVFN 306 F+ Sbjct: 301 PGFFD 305 >gi|89056336|ref|YP_511787.1| porphobilinogen deaminase [Jannaschia sp. CCS1] gi|88865885|gb|ABD56762.1| porphobilinogen deaminase [Jannaschia sp. CCS1] Length = 318 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 128/307 (41%), Positives = 182/307 (59%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT----NRTLTEIGG 60 P RIGTR SPLALA A ETR+ LM +P I+ + T GD + + L E+GG Sbjct: 11 PLRIGTRGSPLALAQARETRARLMAAWDLPEDAFEIVVIKTTGDDRSLIDADVALKELGG 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ +++ ID AVHS KDMPT GL + YLPRED+RD F+S L Sbjct: 71 KGLFTKEIEEDMLTSSIDIAVHSMKDMPTVQPDGLMLDCYLPREDVRDAFVSVNHDGLHA 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++G+SSLRR+A L R D++V++FRG ++TR+ KL A A LA AG++RL Sbjct: 131 LPEGAIVGSSSLRRRAQLFARRPDLNVVEFRGNVQTRMKKLGGGVADATFLAMAGLRRLG 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+V+K + +ED P+ QGAI IE V++ +A +++ I++ +T + ER+FL L Sbjct: 191 MEEVVKSAIEVEDMLPAVAQGAIGIERRVSDTRAGDMLAAIHNTETGQRLAAERSFLKGL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IA A G TL G +L DG R D +G D A+ +R + Sbjct: 251 DGSCQTPIAALAELDGGTLRLRGEILRPDGSEVLTDDRTAPIEDGAALGADMARDLRARA 310 Query: 301 NKNVFNF 307 F++ Sbjct: 311 GDGFFDW 317 >gi|84500376|ref|ZP_00998625.1| porphobilinogen deaminase [Oceanicola batsensis HTCC2597] gi|84391329|gb|EAQ03661.1| porphobilinogen deaminase [Oceanicola batsensis HTCC2597] Length = 315 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 127/304 (41%), Positives = 177/304 (58%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P +IGTR SPLALA A E R L +PP + + T GDR+ +R L EIGGKGL Sbjct: 10 RPLKIGTRGSPLALAQAHEARDRLAHAFDLPPEAFEVCVIQTTGDRVQDRPLKEIGGKGL 69 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT EIE L++G ID AVHS KDMP +GL + YLPRED RD F+S+ + L + Sbjct: 70 FTREIEHALLTGGIDIAVHSMKDMPVLQPEGLLLDCYLPREDPRDAFVSNLYERLDQIPA 129 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRR+A +L R D+ V++FRG ++TRL KL + A A LA AG+ RL + Sbjct: 130 GARVGTSSLRRRAQVLVRRPDLEVVEFRGNVQTRLRKLADGVASATFLAMAGLNRLDRAS 189 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + + L ++ P+ QGAI IE ++ L++ I+ +T + ERAFLA LDGS Sbjct: 190 IARSALATDEMLPAVAQGAIGIERREDDHATAALLEAIHDPETARQLAAERAFLAALDGS 249 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C++ IAG A +G TL G +L DG + R+ D +GR+ + + Sbjct: 250 CETPIAGLADLEGGTLRLRGEILRPDGSEALKDDRSAPVEDGAKLGREMGAALLAQAGDG 309 Query: 304 VFNF 307 F+F Sbjct: 310 FFDF 313 >gi|296080867|emb|CBI18797.3| unnamed protein product [Vitis vinifera] Length = 328 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 139/306 (45%), Positives = 189/306 (61%), Gaps = 6/306 (1%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR SPLALA A+ETR LM H I I+ + T GD+I + L +IGGKGLF Sbjct: 22 RIGTRGSPLALAQAYETRDKLMAAHSELAEEGAIQIVVIKTTGDKILTQPLADIGGKGLF 81 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+EI++ L++G+ID AVHS KD+PT L + LPRED+RD FIS TA SL +L Sbjct: 82 TKEIDEALLNGDIDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLTAASLSELPAG 141 Query: 125 SVIGTSSLRRKALLL-RWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S++GT+SLRRK+ LL R++S + +FRG ++TRL KLN A LLA AG+KRL + Sbjct: 142 SIVGTASLRRKSQLLHRYKSLNVLENFRGNVQTRLRKLNEGVVQATLLALAGLKRLNMTE 201 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + IL+I++ P+ QGAI I N+ K + +NHE T +V CERAFL LDGS Sbjct: 202 NVTSILSIDEMLPAVAQGAIGIACRSNDDKMANYLASLNHEVTRLAVACERAFLETLDGS 261 Query: 244 CKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFIS 300 C++ IAG+A + + F G+V + DG E SR G D I +G+DA + + + Sbjct: 262 CRTPIAGYASHDEDGNCIFKGLVASPDGTKVLETSRKGPYALEDMIKMGKDAGEELLSRA 321 Query: 301 NKNVFN 306 F+ Sbjct: 322 GPGFFD 327 >gi|254463278|ref|ZP_05076694.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2083] gi|206679867|gb|EDZ44354.1| porphobilinogen deaminase [Rhodobacteraceae bacterium HTCC2083] Length = 295 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 131/295 (44%), Positives = 176/295 (59%), Gaps = 4/295 (1%) Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74 +ALA A+ETR L +P VI + T GD+I +R L EIGGKGLFT EIE ++S Sbjct: 1 MALAQAYETRRRLSGAFDLPEEAFVIKVIKTTGDKILDRPLKEIGGKGLFTREIEDDMLS 60 Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRR 134 G ID AVHS KDMP +GL + YLPRED+RD F+S + L DL +V+GTSSLRR Sbjct: 61 GAIDIAVHSMKDMPVLQPEGLVLDTYLPREDVRDAFVSSGHERLADLPSGAVVGTSSLRR 120 Query: 135 KALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDF 194 +A LL +R D++V++FRG ++TRL KL + A LA AG++RL V K + E+ Sbjct: 121 RAQLLNYRPDLNVVEFRGNVQTRLKKLEDKVADCTFLAMAGLRRLDMAHVAKSAIETEEM 180 Query: 195 PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254 P+ QGAI IE +N+ A E++ I+ T + ERAFLA LDGSC++ IAG A Sbjct: 181 LPAVAQGAIGIERRINDTNAAEMLAAIHDTQTGQRLAAERAFLAALDGSCETPIAGLAEL 240 Query: 255 KGSTLYFYGIVLASDG--KIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307 GS + F G VL DG I +VS G D + +G A + + + F + Sbjct: 241 DGSNMRFRGQVLRPDGSESIGDDVS--GTIEDGVAMGEAMAAKLLAEAGEGFFEW 293 >gi|83855078|ref|ZP_00948608.1| porphobilinogen deaminase [Sulfitobacter sp. NAS-14.1] gi|83842921|gb|EAP82088.1| porphobilinogen deaminase [Sulfitobacter sp. NAS-14.1] Length = 317 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 131/305 (42%), Positives = 177/305 (58%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + P RIGTR SPLA+A A+ETR+ L +IP I+ + GD I +R L +IGGKG Sbjct: 9 ENPMRIGTRGSPLAMAQAYETRARLAAAFEIPQAAFEIVVIKVTGDVIQDRPLKDIGGKG 68 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT EIE+ L++G+ID AVHS KDMPT GL + YLPRED RD F++ T +L LA Sbjct: 69 LFTREIEEDLLAGKIDIAVHSMKDMPTIQPGGLLLDTYLPREDPRDAFVAPTLSALDQLA 128 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG+ RL + Sbjct: 129 ESAVVGTSSLRRRAQLLHQRPDLQVVEFRGNVQTRLKKLADGVAECTFLAVAGLNRLGMQ 188 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V ++ P+ QGAI IE + + ++ I+ T + ERAFL LDG Sbjct: 189 HVPATPIDDTLMLPAVAQGAIGIERRAGDLDTEAMLAAIHDTPTGQRLAAERAFLLTLDG 248 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC++ IAG A G TL+ G VL DG R+G +G D AQ + + Sbjct: 249 SCETPIAGLATLDGDTLHLRGQVLRPDGSEAIAGDRSGPIAQGGQMGVDLAQDLLAQAGP 308 Query: 303 NVFNF 307 F++ Sbjct: 309 GFFDW 313 >gi|163745168|ref|ZP_02152528.1| porphobilinogen deaminase [Oceanibulbus indolifex HEL-45] gi|161381986|gb|EDQ06395.1| porphobilinogen deaminase [Oceanibulbus indolifex HEL-45] Length = 315 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 132/304 (43%), Positives = 179/304 (58%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P IGTR S LALA A E R L +P I+ + T GD+I +R L EIGGKGL Sbjct: 10 RPLNIGTRGSLLALAQANEVRDRLAAAFDLPFEAFTIVVIKTTGDKIIDRPLKEIGGKGL 69 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT EIE L+ G ID AVHS KDMPT GL I YLPRED+RD FIS +S+ DL Sbjct: 70 FTREIEAALLDGSIDIAVHSMKDMPTLQPGGLVIDTYLPREDMRDAFISPHLKSIADLPE 129 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR+A + R D+ V++FRG ++TRL KL + A A LA AG+ RLK ++ Sbjct: 130 GAVVGTSSLRRRAQVKLRRPDLEVVEFRGNLQTRLKKLEDGVAEATFLAMAGLNRLKMDE 189 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V K ++ +D P+ QGAI IE +++ +A +++ I+ T + + ERAFLA LDGS Sbjct: 190 VPKAAVHTDDMLPAIAQGAIGIERRMDDTRAADMLAAIHDRATGEQLAAERAFLATLDGS 249 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C++ IAG A G+ + G VL DG D GR+ A+ + + Sbjct: 250 CETPIAGLAELNGTNMRLRGQVLRPDGSDAIGDDVTCTISDGAEAGREMARKLLAEAGPG 309 Query: 304 VFNF 307 F++ Sbjct: 310 FFDW 313 >gi|163737211|ref|ZP_02144629.1| porphobilinogen deaminase [Phaeobacter gallaeciensis BS107] gi|161389815|gb|EDQ14166.1| porphobilinogen deaminase [Phaeobacter gallaeciensis BS107] Length = 320 Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 130/310 (41%), Positives = 182/310 (58%), Gaps = 10/310 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIGG 60 P +IGTR SPLALA A ETR+ L+ +P I+ + T GD ++ L E+GG Sbjct: 12 PLKIGTRGSPLALAQAHETRARLVAAFDLPQDAFEIVVIKTSGDNQALIAADKPLKELGG 71 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+SG ID AVHS KDMP GL + YLPRED+RD F+S ++ D Sbjct: 72 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVAQPAGLLLDTYLPREDVRDAFVSPDVTAITD 131 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG+ RL Sbjct: 132 LRAGAVVGTSSLRRRAQLLHRRPDLQVVEFRGNVQTRLTKLRDGVAECTFLAMAGLNRLG 191 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++V + ED P+ QGAI IE ++ + +++ ++ +T + + ERAFLA L Sbjct: 192 ADQVPATPIPPEDMLPAVAQGAIGIERRADDSRTGDMLAALHDRETGERLAAERAFLAAL 251 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIR 297 DGSC++ IAG A +G TL G VL DG E + C D +GR+ A + Sbjct: 252 DGSCETPIAGLATLEGRTLRLRGEVLRPDGS---EAISDEQTCPVEDGAELGREMAAKLL 308 Query: 298 FISNKNVFNF 307 + F++ Sbjct: 309 AQAGAGFFDW 318 >gi|83941602|ref|ZP_00954064.1| porphobilinogen deaminase [Sulfitobacter sp. EE-36] gi|83847422|gb|EAP85297.1| porphobilinogen deaminase [Sulfitobacter sp. EE-36] Length = 317 Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 131/305 (42%), Positives = 177/305 (58%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + P RIGTR SPLA+A A+ETR+ L +IP I+ + GD I +R L +IGGKG Sbjct: 9 ENPMRIGTRGSPLAMAQAYETRARLAAAFEIPQAAFEIVVIKVTGDVIQDRPLKDIGGKG 68 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT EIE+ L++G+ID AVHS KDMPT GL + YLPRED RD F++ T +L LA Sbjct: 69 LFTREIEEDLLAGKIDIAVHSMKDMPTIQPGGLLLDTYLPREDPRDAFVAPTLSALDQLA 128 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG+ RL + Sbjct: 129 EGAVVGTSSLRRRAQLLHQRPDLQVVEFRGNVQTRLKKLADGVAECTFLAVAGLNRLGMQ 188 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V ++ P+ QGAI IE + + ++ I+ T + ERAFL LDG Sbjct: 189 HVPATPIDDTLMLPAVAQGAIGIERRAGDLDTEAMLAAIHDTPTGQRLAAERAFLLTLDG 248 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC++ IAG A G TL+ G VL DG R+G +G D AQ + + Sbjct: 249 SCETPIAGLATLDGDTLHLRGQVLRPDGSEAIAGDRSGPIAQGGQMGVDLAQDLLAQAGP 308 Query: 303 NVFNF 307 F++ Sbjct: 309 GFFDW 313 >gi|163740378|ref|ZP_02147772.1| porphobilinogen deaminase [Phaeobacter gallaeciensis 2.10] gi|161386236|gb|EDQ10611.1| porphobilinogen deaminase [Phaeobacter gallaeciensis 2.10] Length = 320 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 130/310 (41%), Positives = 182/310 (58%), Gaps = 10/310 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIGG 60 P +IGTR SPLALA A ETR+ L+ +P I+ + T GD ++ L E+GG Sbjct: 12 PLKIGTRGSPLALAQAHETRARLVAAFDLPQDAFEIVVIKTSGDNQALIAADKPLKELGG 71 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+SG ID AVHS KDMP GL + YLPRED+RD F+S ++ D Sbjct: 72 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVAQPAGLLLDTYLPREDVRDAFVSPDVTAITD 131 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG+ RL Sbjct: 132 LRAGAVVGTSSLRRRAQLLHRRPDLQVVEFRGNVQTRLTKLRDGVAECTFLAMAGLNRLG 191 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++V + ED P+ QGAI IE ++ + +++ ++ +T + + ERAFLA L Sbjct: 192 ADQVPATPIPPEDMLPAVAQGAIGIERRADDSRTGDMLAALHDRETGERLAAERAFLAAL 251 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIR 297 DGSC++ IAG A +G TL G VL DG E + C D +GR+ A + Sbjct: 252 DGSCETPIAGLATLEGRTLRLRGEVLRPDGS---EAISDEQTCPVEDGAELGREMATKLL 308 Query: 298 FISNKNVFNF 307 + F++ Sbjct: 309 AQAGAGFFDW 318 >gi|149915548|ref|ZP_01904074.1| porphobilinogen deaminase [Roseobacter sp. AzwK-3b] gi|149810440|gb|EDM70283.1| porphobilinogen deaminase [Roseobacter sp. AzwK-3b] Length = 304 Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 127/302 (42%), Positives = 177/302 (58%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++GTR SPLALA A+ETRS L +PP I+ + T GDRI +R L EIGGKGLFT Sbjct: 1 MKLGTRGSPLALAQAYETRSRLSAAFDLPPEAFEIVVIKTTGDRIIDRPLKEIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EIE+ ++SGEID A+HS KDMP +GL + YLPRED+RD F+S L DL + Sbjct: 61 REIEEAMLSGEIDIAIHSMKDMPVLQPEGLVLDTYLPREDVRDAFVSPHVGGLADLEPGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRRKA +L + V++FRG ++TRL KL + A LA AG+ RL + +V Sbjct: 121 KVGTSSLRRKAQVLVAYPHLDVVEFRGNVQTRLKKLQDGVAACTFLAMAGLNRLGRSEVA 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ P+ QGAI IE ++ + E++ I+ T + ERAFLA LDGSC+ Sbjct: 181 TAAIETDEMLPAVAQGAIGIERRRDDTRTAEMLAAIHDTPTGQRLAAERAFLAALDGSCE 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG A G TL G VL DG + ++ D +G + + + + F Sbjct: 241 TPIAGLAELDGGTLRLRGQVLRPDGSEALDDDQSAPIEDGAKLGHEMGRKLLERAGPGFF 300 Query: 306 NF 307 ++ Sbjct: 301 DW 302 >gi|114765839|ref|ZP_01444932.1| porphobilinogen deaminase [Pelagibaca bermudensis HTCC2601] gi|114541838|gb|EAU44875.1| porphobilinogen deaminase [Roseovarius sp. HTCC2601] Length = 319 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 131/307 (42%), Positives = 178/307 (57%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIGG 60 P +IGTR SPLALA A ETR L +P I+ + T GD +R L EIG Sbjct: 11 PLKIGTRGSPLALAQAHETRDRLAAAFDLPQDAFEIVVIKTTGDDRAMIAADRPLKEIGN 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE++L+SG ID AVHS KDMPT+ +GL + YLPRED RD FIS L Sbjct: 71 KGLFTKEIEEQLLSGGIDIAVHSMKDMPTEQPEGLVLDCYLPREDERDAFISPGHAGLAA 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A A LA AG++R+ Sbjct: 131 LPEGTVVGTSSLRRRAQLLNRRPDLQVVEFRGNVQTRLKKLEDGVAAATFLAMAGLRRMD 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + ++ +D P+ QGAI IE ++ + +++ I+ DT + ER FLA L Sbjct: 191 MTDIPMTAMSPDDMLPAIAQGAIGIERRSDDSRTGDMLAAIHDTDTATRLAAERTFLAAL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A G L G +LA DG H +G D +GR A+ + + Sbjct: 251 DGSCETPIAGLAELDGDRLRLRGEILAPDGSASHAGELSGPAADGPAMGRALAEELLARA 310 Query: 301 NKNVFNF 307 + F + Sbjct: 311 GPDFFAW 317 >gi|89069761|ref|ZP_01157097.1| porphobilinogen deaminase [Oceanicola granulosus HTCC2516] gi|89044707|gb|EAR50818.1| porphobilinogen deaminase [Oceanicola granulosus HTCC2516] Length = 313 Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 132/304 (43%), Positives = 176/304 (57%), Gaps = 1/304 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P +IGTR SPLALA A ETR L H +P ++ + T GDR+ +R L EIGGKGL Sbjct: 9 RPLKIGTRGSPLALAQAHETRDRLAAAHGLPGEAFEVVVIRTTGDRVVDRPLKEIGGKGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EIE+ ++SG ID AVHS KDMP +GL + YLPRED RD F+S +K L Sbjct: 69 FTKEIEEAMLSGAIDIAVHSMKDMPVAQPEGLVLDCYLPREDPRDAFVSLLHAGIKALPD 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRKA LL R D+ V++FRG ++TRL KL + A A LA AG+ RL + Sbjct: 129 GATVGTSSLRRKAQLLHRRPDLHVVEFRGNVQTRLRKLESGVAVATFLAVAGLNRLGADD 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V + + ED P+ QGAI IE ++ E++ I+ T + + ERAFLA LDGS Sbjct: 189 VPQAPIAPEDMLPAVAQGAIGIERRASDEGLGEMLAAIHDRATGERLAAERAFLAALDGS 248 Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C++ IAG A G L G +LA DG D +G D A+ + + Sbjct: 249 CETPIAGLAELIGDGRLRLRGEILAHDGSRCLADEAEAQIADGAALGTDMARRLLAQAGP 308 Query: 303 NVFN 306 F+ Sbjct: 309 GFFD 312 >gi|84685204|ref|ZP_01013103.1| porphobilinogen deaminase [Maritimibacter alkaliphilus HTCC2654] gi|84666936|gb|EAQ13407.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2654] Length = 319 Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 138/311 (44%), Positives = 186/311 (59%), Gaps = 9/311 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIG 59 KP +IGTR SPLALA A+ETR L +P I+ + T GD +R L EIG Sbjct: 10 KPLKIGTRGSPLALAQAYETRDRLAAAFDLPETAFEIVVIKTTGDDRAMIAADRPLKEIG 69 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 KGLFT EIE +L++G ID AVHS KDMPT+ GL + YLPRED RD FIS + Sbjct: 70 NKGLFTREIEDQLLNGGIDLAVHSMKDMPTEQPPGLTLDCYLPREDTRDAFISLGGGGIH 129 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 LA +V+GTSSLRRKA LL R D++V++FRG ++TRL KL + A A LA AGI RL Sbjct: 130 GLAEGAVVGTSSLRRKAQLLNRRPDLNVVEFRGNVQTRLTKLRDGVAEATFLAMAGITRL 189 Query: 180 KK-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 ++V + + ED P+ QGAI IE ++ ++++ I+H T + ER+FLA Sbjct: 190 GMLDEVPHDAIAPEDMLPAIAQGAIGIERRSHDTNVADMLEAIHHGGTERRLAAERSFLA 249 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCDAINIGRDAAQYI 296 LDGSC++ IAG A G TL G +L +DG + E+S G D ++GR AQ + Sbjct: 250 TLDGSCETPIAGLAEIDGGTLRLRGEILRTDGSEALADEIS--GAVEDGPDMGRALAQKL 307 Query: 297 RFISNKNVFNF 307 + + F++ Sbjct: 308 LSRAGPDFFDW 318 >gi|224094087|ref|XP_002310073.1| predicted protein [Populus trichocarpa] gi|222852976|gb|EEE90523.1| predicted protein [Populus trichocarpa] Length = 363 Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 140/307 (45%), Positives = 188/307 (61%), Gaps = 6/307 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR LM H I I+ + T GD+I ++ L +IGGKGL Sbjct: 56 IRIGTRGSPLALAQAHETRDKLMASHSDLAEEGAIQIVIIKTTGDKIQSQPLADIGGKGL 115 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A SL DL Sbjct: 116 FTKEIDEALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSAASLADLPA 175 Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S+IGT+SLRRK+ +L +SV + FRG ++TRL KLN A LLA AG+KRL Sbjct: 176 GSIIGTASLRRKSQILHRYPSLSVEENFRGNVQTRLRKLNEGVVKATLLALAGLKRLNMT 235 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + IL ++D P+ QGAI I N+ K + +NHE+T +V CERAFL LDG Sbjct: 236 ENVTSILPLDDMLPAVAQGAIGIACRSNDDKMVNYLASLNHEETRLAVACERAFLETLDG 295 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFI 299 SC++ IAG+A + F G+V + DG+ E SR G D I +G+DA + + Sbjct: 296 SCRTPIAGYARKDENGDCIFKGLVASPDGRRVLETSRKGPYAFDDMIAMGKDAGKELLSQ 355 Query: 300 SNKNVFN 306 + F+ Sbjct: 356 AGPGFFD 362 >gi|312114941|ref|YP_004012537.1| porphobilinogen deaminase [Rhodomicrobium vannielii ATCC 17100] gi|311220070|gb|ADP71438.1| porphobilinogen deaminase [Rhodomicrobium vannielii ATCC 17100] Length = 313 Score = 241 bits (616), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 131/307 (42%), Positives = 192/307 (62%), Gaps = 6/307 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVH--KIPPHNIVIIPLSTKGDRITNRTLTEIG 59 + + RIGTR S LALA A E ++ L ++ ++ +VI T GD+I ++ L+ +G Sbjct: 6 DARQIRIGTRGSALALAQATEVQNRLAAIYGDEVKFERVVI---KTTGDKILDKALSLVG 62 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLFT+E+E+ L + +ID AVHS KD+ L GL+I+ LPRED+RD FIS A+SL Sbjct: 63 GKGLFTKELEEALFADQIDIAVHSMKDVQAFLPDGLEIACNLPREDVRDAFISMKAKSLA 122 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 D+ +VIGT+S+RR+A + R D+ + FRG +++RL KL + A A LLA AG+ RL Sbjct: 123 DMPEGAVIGTASVRREAFIKNKRPDLKTVLFRGNVQSRLKKLEDGVADATLLASAGLNRL 182 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I + + +ED P+P QGAI IE N+ +EL+ ++ E T +++ ERAFL+E Sbjct: 183 GLSDRITQHIPVEDMLPAPAQGAIGIEIRSNDQVTRELIMALHDEATGYAIDAERAFLSE 242 Query: 240 LDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 LDGSC++ IA A G + F G +L DG +E +R G+ DA +G+DAAQ + Sbjct: 243 LDGSCRTPIAALARYDGHGRVSFKGAILTPDGARIYETTREGSANDAAAMGKDAAQELYA 302 Query: 299 ISNKNVF 305 K+VF Sbjct: 303 RGGKDVF 309 >gi|255635113|gb|ACU17914.1| unknown [Glycine max] Length = 350 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 137/297 (46%), Positives = 188/297 (63%), Gaps = 6/297 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A+ETR LM H I I+ + T GD+I ++ L +IGGKGL Sbjct: 43 LRIGTRGSPLALAQAYETRDKLMASHAELAEEGAIQIVIIKTTGDKILSQPLADIGGKGL 102 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+G+ID AVHS KD+PT L + LPRED+RD FIS +A SL DL Sbjct: 103 FTKEIDEALINGDIDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLSAASLADLPS 162 Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S++GT+SLRRK+ +L ++V + FRG ++TRL KL+ A LLA AG+KRL Sbjct: 163 GSIVGTASLRRKSQILHRYPSLNVEENFRGNVQTRLRKLSEGIVQATLLALAGLKRLNMT 222 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + IL+I+D P+ QGAI I N+ K E + +NHE+T +V+CERAFL +L+G Sbjct: 223 ENVTSILSIDDMLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAVSCERAFLEKLEG 282 Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYI 296 SC++ IAG+A + F G+V + DG E SR G D I +G+DA + + Sbjct: 283 SCRTPIAGYASRNEDGNCLFRGLVASPDGIRVLETSRIGPYAFEDTIKMGKDAGEEL 339 >gi|159486921|ref|XP_001701485.1| porphobilinogen deaminase [Chlamydomonas reinhardtii] gi|158271667|gb|EDO97482.1| porphobilinogen deaminase [Chlamydomonas reinhardtii] Length = 349 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 137/312 (43%), Positives = 195/312 (62%), Gaps = 11/312 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRS----SLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 K +IGTR SPLALA A+ TR S ++ + IVII T GD+I N+ L +IG Sbjct: 41 KTVKIGTRGSPLALAQAYMTRDLLKKSFPELSEEGALEIVII--KTTGDKILNQPLADIG 98 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLFT+EI+ L+SG+ID AVHS KD+PT L +G + LPRED+RDVFIS A+ L Sbjct: 99 GKGLFTKEIDDALLSGKIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDVFISPVAKDLS 158 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +++G++SLRR+A +L + V +FRG ++TRL KLN A LLA AG+KRL Sbjct: 159 ELPAGAIVGSASLRRQAQILAKYPHLKVENFRGNVQTRLRKLNEGACSATLLALAGLKRL 218 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I + L+I++ P+ QGAI I ++ ++ L+ +NHE+T +V CERAFL Sbjct: 219 DMTEHITKTLSIDEMLPAVSQGAIGIACRTDDGASRNLLAALNHEETRIAVVCERAFLTA 278 Query: 240 LDGSCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSR--NGNRCDAINIGRDAAQY 295 LDGSC++ IAG+A+ KG+ L+F G+V DGK SR DA+ G +A + Sbjct: 279 LDGSCRTPIAGYAH-KGADGMLHFSGLVATPDGKQIMRASRVVPFTEADAVKCGEEAGKE 337 Query: 296 IRFISNKNVFNF 307 ++ K +F + Sbjct: 338 LKANGPKELFMY 349 >gi|56698469|ref|YP_168844.1| porphobilinogen deaminase [Ruegeria pomeroyi DSS-3] gi|56680206|gb|AAV96872.1| porphobilinogen deaminase [Ruegeria pomeroyi DSS-3] Length = 319 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 134/307 (43%), Positives = 188/307 (61%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT----NRTLTEIGG 60 P +IGTR SPLALA A+ETR L +P I+ +ST GD +R L EIG Sbjct: 11 PLKIGTRGSPLALAQAYETRHRLGAAFDLPEDAFEIVVISTTGDNRAMIEADRPLKEIGN 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ ++ G+ID AVHS KDMP + GL + +LPRED+RD FIS +++D Sbjct: 71 KGLFTKEIEEAMLRGDIDIAVHSTKDMPVEQPAGLVLDTFLPREDVRDAFISPGHSAIRD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L +V+GTSSLRRKA LL R D+ V++FRG ++TRL KL+ A LA AGI+RL Sbjct: 131 LPLGAVVGTSSLRRKAQLLNRRPDLKVVEFRGNVQTRLRKLSEGVAECTFLAMAGIRRLN 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +V ++ +D P+ QGAI IE +++ +A E++ I+H +T + ERA LA L Sbjct: 191 MAEVPATAISPDDMLPAIAQGAIGIERRMDDTRAAEMLTAIHHGETGQRLAAERALLAAL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A G+TL G VL DG + R+G+ D +G + A+ + + Sbjct: 251 DGSCETPIAGLAELDGTTLRLRGEVLRPDGSEAITLDRSGDVADGPALGTEMARELLAQA 310 Query: 301 NKNVFNF 307 F++ Sbjct: 311 GPGFFDW 317 >gi|298292774|ref|YP_003694713.1| porphobilinogen deaminase [Starkeya novella DSM 506] gi|296929285|gb|ADH90094.1| porphobilinogen deaminase [Starkeya novella DSM 506] Length = 309 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 124/300 (41%), Positives = 176/300 (58%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR SPLAL A R +L+ H P + + + T GD IT+R L+E GGKGLFT Sbjct: 8 LRLGTRGSPLALWQAHAVRDALVKAHGWAPEAVEVQVIRTTGDAITDRALSEAGGKGLFT 67 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ ID AVHSAKDM TKL GL + YLPR D+RD I SL DL + Sbjct: 68 KELEEALLDRRIDLAVHSAKDMATKLPDGLHLVGYLPRADVRDALILREGSSLADLKPGA 127 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT+SLRR+A L R R D+ V RG + TRL+K+ + + LLA AG+ RL Sbjct: 128 KVGTASLRREAQLRRLRPDLQVSLLRGNVHTRLSKVESGEFDGTLLALAGLTRLGMADKA 187 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +L++ DF P+ GQGA+ IE+ + L+ + T ++ ERA+L ELDGSC+ Sbjct: 188 SALLDVADFLPAVGQGAVAIESRFGDIAVDALLVPVTCPATGLALRVERAYLGELDGSCR 247 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + I G A +G + F G+VL+ DG ++E+ R G A+ +G A Q +R + ++ Sbjct: 248 TPIGGLAEVQGEEIRFRGVVLSPDGSRYYEIVRYGPANRALELGLAAGQEMRAMVPADLL 307 >gi|86139102|ref|ZP_01057673.1| porphobilinogen deaminase [Roseobacter sp. MED193] gi|85824333|gb|EAQ44537.1| porphobilinogen deaminase [Roseobacter sp. MED193] Length = 319 Score = 238 bits (608), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 131/310 (42%), Positives = 176/310 (56%), Gaps = 10/310 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIGG 60 P +IGTR SPLALA A+ETR L + +P I+ + T GD ++ L E+GG Sbjct: 11 PLKIGTRGSPLALAQAYETRRRLAEAFDLPHEAFEIVVIKTSGDNQALIAADKPLKELGG 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+SG ID AVHS KDMP +GL + YLPRED+RD F+S L+D Sbjct: 71 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVAQPEGLLLDCYLPREDVRDAFVSPKFSRLQD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A L+ R D+ V++FRG ++TRL KLN A LA AG+ RL Sbjct: 131 LEPGAVVGTSSLRRRAQLMNRRPDLKVVEFRGNVQTRLKKLNEGVAECTFLAMAGLNRLA 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V + D P+ QGAI IE ++ + +++ I+ T + ERAFLA L Sbjct: 191 MADVPATAIETNDMLPAVAQGAIGIERRGDDSRTAAMLEAIHDVTTGKRLAAERAFLAAL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIR 297 DGSC++ IAG A G TL G VL DG E C D +GR+ A + Sbjct: 251 DGSCETPIAGLAELDGGTLRLRGEVLRPDG---SEALAEDQSCAIEDGGELGREMAAKLL 307 Query: 298 FISNKNVFNF 307 + F++ Sbjct: 308 ATAGPGFFDW 317 >gi|255634492|gb|ACU17610.1| unknown [Glycine max] Length = 350 Score = 238 bits (607), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 136/297 (45%), Positives = 187/297 (62%), Gaps = 6/297 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +IGTR SPLALA A+ETR LM H I I+ + T GD+I ++ L +IGGKGL Sbjct: 43 LKIGTRGSPLALAQAYETRDKLMASHPELAEEGAIQIVIIKTTGDKILSQPLADIGGKGL 102 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+G+ D AVHS KD+PT L + LPRED+RD FIS +A SL DL Sbjct: 103 FTKEIDEALINGDSDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLSAASLADLPS 162 Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SV+GT+SLRRK+ +L ++V + FRG ++TRL KL+ A LLA AG+KRL Sbjct: 163 GSVVGTASLRRKSQILHRYPSLNVEENFRGNVQTRLRKLSEGIVQATLLALAGLKRLNMT 222 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + IL+I+D P+ QGAI I N+ K E + +NHE+T +V+CERAFL +L+G Sbjct: 223 ENVSSILSIDDMLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAVSCERAFLEKLEG 282 Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYI 296 SC + IAG+A + F G+V + DG E SR G+ D I +G+DA + + Sbjct: 283 SCHTPIAGYASRNEDGNCLFRGLVASPDGTRVLETSRIGSYAFEDMIKMGKDAGEEL 339 >gi|83594897|ref|YP_428649.1| porphobilinogen deaminase [Rhodospirillum rubrum ATCC 11170] gi|83577811|gb|ABC24362.1| Porphobilinogen deaminase [Rhodospirillum rubrum ATCC 11170] Length = 321 Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 127/313 (40%), Positives = 177/313 (56%), Gaps = 7/313 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKI--PPHNIVIIPLSTKGDRITNRTLTEI 58 +EK RIGTR SPLALA + R L+ + P + I + T GD I +R L+E+ Sbjct: 5 IEKSKLRIGTRGSPLALAQTHQVRDLLIAANPDLGEPGAVTIEVIKTTGDAILDRPLSEL 64 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLFT EI+ +++G ID AVHS KD+PT L G+ + L RED+RD F+ L Sbjct: 65 GGKGLFTREIDDAMLAGTIDIAVHSMKDVPTYLPDGIVLPCMLEREDVRDAFLGRDHARL 124 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 DL SV+GT+SLRR A +L R DI VI FRG ++TRL+KL +A A +LA AG+ R Sbjct: 125 ADLPEGSVVGTASLRRGAQILAMRPDIKVISFRGNVQTRLDKLARGEADATMLAIAGLNR 184 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L +L I++ P+ QGA+ + + A + +NH T V ERAFL Sbjct: 185 LGMADKASSVLEIDEMLPAVAQGAVGVTCRAGDETAHRWLAPLNHRATQLCVEIERAFLT 244 Query: 239 ELDGSCKSAIAGFAYCK-----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 LDGSC++ I G A K T++F G+++ +DGK+ H+ +R G D I +G DA Sbjct: 245 RLDGSCRTPIGGLARLKRVEDPSGTVFFRGMIIRTDGKVIHQTTREGLAADGIALGDDAG 304 Query: 294 QYIRFISNKNVFN 306 + + F Sbjct: 305 AELLAKAGPGFFQ 317 >gi|307103191|gb|EFN51453.1| hypothetical protein CHLNCDRAFT_33052 [Chlorella variabilis] Length = 361 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 133/312 (42%), Positives = 191/312 (61%), Gaps = 10/312 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN----IVIIPLSTKGDRITNRTLTEIG 59 K +IGTR SPLALA A+ TR L P N + II + T GD+I N+ L++IG Sbjct: 52 KTLKIGTRGSPLALAQAYLTRDLLKST--FPELNEEGALEIIIIKTTGDKILNQPLSDIG 109 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLFT+EI+ L+ G ID AVHS KD+PT L G + LPRED+RDVFIS +S+ Sbjct: 110 GKGLFTKEIDDALLDGRIDIAVHSMKDVPTYLPAGTVLPCNLPREDVRDVFISAKYKSIA 169 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +V+G++SLRR+A +L + V++FRG ++TRL KL A LLA AG+KRL Sbjct: 170 ELPEGAVVGSASLRRQAQILAKYPTLQVVNFRGNVQTRLRKLQEGACDATLLALAGLKRL 229 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 IL+ ++ P+ QGAI I + ++ + +NHE+T ++ CERAFLA Sbjct: 230 GLADKATSILSTDEMLPAVAQGAIGIACREGDDRSAAALAALNHEETRLAIVCERAFLAA 289 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIR 297 LDGSC++ IAG+A+ L F G+V DGK +E +R G+ +A IG+DA ++ Sbjct: 290 LDGSCRTPIAGWAHKADGQLAFRGLVSTPDGKKMYETTRTGSLTEDEARAIGQDAGTELK 349 Query: 298 FISNKN--VFNF 307 + ++ VF++ Sbjct: 350 QQAQQDGTVFDW 361 >gi|224081346|ref|XP_002306378.1| predicted protein [Populus trichocarpa] gi|222855827|gb|EEE93374.1| predicted protein [Populus trichocarpa] Length = 363 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 138/306 (45%), Positives = 188/306 (61%), Gaps = 6/306 (1%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR SPLALA A ETR LM H + I I+ + T GD+I ++ L +IGGKGLF Sbjct: 57 RIGTRGSPLALAQAHETRDKLMASHAELAEDGAIQIVIIKTTGDKILSQPLADIGGKGLF 116 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+EI++ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A SL DL Sbjct: 117 TKEIDEALINGDIDIAVHSMKDVPTYLPEMTILPCNLPREDVRDAFISMSATSLADLPAG 176 Query: 125 SVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S++GT+SLRRK+ +L +SV + FRG ++TRL KLN A LLA AG+KRL + Sbjct: 177 SIVGTASLRRKSQILHRFPSLSVEENFRGNVQTRLRKLNEGVVKATLLALAGLKRLNMTE 236 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + IL I+D P+ QGAI I ++ K + +NHE+T +V CERAFL LDGS Sbjct: 237 NVTSILPIDDMLPAVAQGAIGIACRDSDDKMANYLASLNHEETRLAVACERAFLETLDGS 296 Query: 244 CKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFIS 300 C++ IAG+A + F G+V + DG + SR G D I +G+DA + + + Sbjct: 297 CRTPIAGYARRDENGDCIFKGLVASPDGTRVLKTSRKGPYAFDDMIAMGKDAGKELLSQA 356 Query: 301 NKNVFN 306 F+ Sbjct: 357 GPGFFD 362 >gi|88770654|gb|ABD51930.1| chloroplast hydroxymethylbilane synthase [Guillardia theta] Length = 346 Score = 234 bits (598), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 126/312 (40%), Positives = 188/312 (60%), Gaps = 9/312 (2%) Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPH------NIVIIPLSTKGDRITNR 53 M +P ++GTR SPLALA A+ETR L ++ P + I ++T GD ++ Sbjct: 13 MSGEPVIKLGTRGSPLALAQAYETRRRLAEL--FPEELGEKGEKVSINIINTSGDMELSK 70 Query: 54 TLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH 113 L+EIGGKGLFT+E++ L+ E+D VHS KD+PT L G + A LPRED RD FIS Sbjct: 71 ALSEIGGKGLFTKELDVALLKKEVDFCVHSMKDVPTYLPDGTHLEAMLPREDTRDAFISP 130 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173 QS +++ +VIG++SLRR+A + I ++FRG ++TRL KL++ A LLA Sbjct: 131 KYQSFEEMPEGTVIGSASLRRQAQIFAKNPKIKCVNFRGNVQTRLRKLDDEVVDATLLAL 190 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG+KR+ + ++L+ ++ P+ QGAI I+ ++ K + + +NH+DT V+CE Sbjct: 191 AGLKRMNMADCVTKVLDWDEMLPAVAQGAIGIQVRSDDDKTLKYISALNHKDTKTCVDCE 250 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 R+FLA LDGSCK+ IAG A ++F G+V + DG R G+ D + IG+DA Sbjct: 251 RSFLATLDGSCKTPIAGQARIIDGKIHFRGLVASPDGSKIFRAERVGDVSDYMKIGKDAG 310 Query: 294 QYIRFISNKNVF 305 + IR + + F Sbjct: 311 EEIRKEAGEQFF 322 >gi|255262497|ref|ZP_05341839.1| porphobilinogen deaminase [Thalassiobium sp. R2A62] gi|255104832|gb|EET47506.1| porphobilinogen deaminase [Thalassiobium sp. R2A62] Length = 316 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 127/267 (47%), Positives = 166/267 (62%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 KP +IGTR SPLALA A ETR L +P I + T GDRI +R L EIGGKGL Sbjct: 10 KPLKIGTRGSPLALAQAHETRERLAAAFDLPHEAFAIQVIQTTGDRIIDRPLKEIGGKGL 69 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT EIE+ ++ G ID AVHS KDMPT GL + YLPRED+RD FI+ +L DL Sbjct: 70 FTREIEQAMLDGSIDIAVHSMKDMPTLQPDGLLLDTYLPREDVRDAFIALDGGTLADLPD 129 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 V+GTSSLRR+A L R D+ V++FRG ++TRL KL + A A LA AG+ RLK + Sbjct: 130 GGVVGTSSLRRQAQLRLRRPDLQVVEFRGNLQTRLRKLGDKVADATFLAMAGLNRLKMDD 189 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V + + +E+ P+ QGAI IE N+ +A +++ I+ T ++ ERAFL LDGS Sbjct: 190 VTRTPIEVEEMLPAVAQGAIGIERRANDLRAADMLAAIHDRLTGQRLSAERAFLQALDGS 249 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG 270 C++ IA A G+++ G VL DG Sbjct: 250 CETPIAALAELDGTSMRLRGEVLRPDG 276 >gi|297810933|ref|XP_002873350.1| hypothetical protein ARALYDRAFT_908776 [Arabidopsis lyrata subsp. lyrata] gi|297319187|gb|EFH49609.1| hypothetical protein ARALYDRAFT_908776 [Arabidopsis lyrata subsp. lyrata] Length = 382 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 133/297 (44%), Positives = 184/297 (61%), Gaps = 6/297 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A+ETR L H + I I + T GD+I ++ L +IGGKGL Sbjct: 75 IRIGTRGSPLALAQAYETREKLKSKHPELVEDGAIHIEIIKTTGDKILSQPLADIGGKGL 134 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+G ID AVHS KD+PT L + + LPRED+RD FI TA SL +L Sbjct: 135 FTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFICLTAASLAELPA 194 Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SV+GT+SLRRK+ +L + V + FRG ++TRL+KL K A LLA AG+KRL Sbjct: 195 GSVVGTASLRRKSQILHKYPALRVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSMT 254 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + IL++++ P+ QGAI I ++ K + +NHE+T +++CERAFL LDG Sbjct: 255 ENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDG 314 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYI 296 SC++ IAG+A + F G+V + DG E SR G D + +G+DA Q + Sbjct: 315 SCRTPIAGYAAKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQEL 371 >gi|119386338|ref|YP_917393.1| porphobilinogen deaminase [Paracoccus denitrificans PD1222] gi|166217779|sp|A1B853|HEM3_PARDP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|119376933|gb|ABL71697.1| porphobilinogen deaminase [Paracoccus denitrificans PD1222] Length = 313 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 130/305 (42%), Positives = 179/305 (58%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + P RIGTR S LALA A ETR LM H + I+ + T GDR+ +R L EIGGKG Sbjct: 8 QNPIRIGTRGSALALAQAHETRDRLMAAHGLAADAFRIVVIKTTGDRVLDRPLKEIGGKG 67 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT EIE L++ EID AVHS KDMPT +GL I YLPRED+RD F+S ++ +L Sbjct: 68 LFTREIEDALLAHEIDIAVHSMKDMPTIQPEGLVIDCYLPREDVRDAFVSAQFAAISELP 127 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+G+SSLRR+A L R D+ +++FRG ++TRL KL + A A LA AG+ RL Sbjct: 128 QGAVVGSSSLRRRAQLAARRPDLKLVEFRGNVQTRLKKLEDGVAVATFLAMAGLTRLGML 187 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V + + ++ P+ QG I +E ++ + L+ I+ D+ V ERAFLA LDG Sbjct: 188 HVARGAVEPDEMLPAVAQGCIGVERRADDARTASLLAAISDRDSALRVTAERAFLARLDG 247 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC++ IAG A +G L G +L DG R G D +G D A+ +R + Sbjct: 248 SCQTPIAGLAELQGDRLRLRGEILRPDGSEVIAAERVGPAADGAAMGTDLAEELRGRAPA 307 Query: 303 NVFNF 307 + F++ Sbjct: 308 DFFDW 312 >gi|260574199|ref|ZP_05842204.1| porphobilinogen deaminase [Rhodobacter sp. SW2] gi|259023665|gb|EEW26956.1| porphobilinogen deaminase [Rhodobacter sp. SW2] Length = 314 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 130/303 (42%), Positives = 180/303 (59%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR SPLAL A ETR SLM +P I+ + GD++ +R L EIGGKGLF Sbjct: 11 PLKIGTRGSPLALWQAHETRRSLMAAFSLPEAAFEIVVIKVTGDQVQDRALKEIGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE L+ G ID AVHS KDMPT +GL + YLPRED+RD F+S T L DL Sbjct: 71 TREIEDALLDGSIDIAVHSMKDMPTLQPEGLLLDCYLPREDVRDAFVSPTVARLADLPHG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G+SSLRR+A L R D+++++FRG ++TR+ KL + A A LA AG+ RL V Sbjct: 131 ATVGSSSLRRRAQLAARRPDLNLVEFRGNVQTRMKKLEDGVAVATFLAMAGLNRLGMAHV 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + +E+ P+ QGAI IE +P+A+ L+ I+H T + CERA+L ELDGSC Sbjct: 191 ARSAIEVEEMLPAVAQGAIGIERRTADPRAEALLAGIHHGPTGIRLACERAYLQELDGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + IAG + +G ++ G +L DG DA GRD A+ + + + Sbjct: 251 ATPIAGMSVLEGDRIWLRGEILRPDGSEVIAGEIRAAASDAAEAGRDLARQLLGRAPEGF 310 Query: 305 FNF 307 F++ Sbjct: 311 FSW 313 >gi|15241573|ref|NP_196445.1| HEMC (HYDROXYMETHYLBILANE SYNTHASE); hydroxymethylbilane synthase [Arabidopsis thaliana] gi|2495179|sp|Q43316|HEM3_ARATH RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase; Flags: Precursor gi|16930521|gb|AAL31946.1|AF419614_1 AT5g08280/F8L15_10 [Arabidopsis thaliana] gi|313150|emb|CAA51941.1| hydroxymethylbilane synthase [Arabidopsis thaliana] gi|313838|emb|CAA52061.1| hydroxymethylbilane synthase [Arabidopsis thaliana] gi|10178270|emb|CAC08328.1| hydroxymethylbilane synthase [Arabidopsis thaliana] gi|17979402|gb|AAL49926.1| putative hydroxymethylbilane synthase [Arabidopsis thaliana] gi|21689853|gb|AAM67570.1| putative hydroxymethylbilane synthase [Arabidopsis thaliana] gi|332003894|gb|AED91277.1| Porphobilinogen deaminase [Arabidopsis thaliana] Length = 382 Score = 232 bits (591), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 132/297 (44%), Positives = 184/297 (61%), Gaps = 6/297 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A+ETR L H + I I + T GD+I ++ L +IGGKGL Sbjct: 75 IRIGTRGSPLALAQAYETREKLKKKHPELVEDGAIHIEIIKTTGDKILSQPLADIGGKGL 134 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+G ID AVHS KD+PT L + + LPRED+RD FI TA +L +L Sbjct: 135 FTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFICLTAATLAELPA 194 Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SV+GT+SLRRK+ +L + V + FRG ++TRL+KL K A LLA AG+KRL Sbjct: 195 GSVVGTASLRRKSQILHKYPALHVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSMT 254 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + IL++++ P+ QGAI I ++ K + +NHE+T +++CERAFL LDG Sbjct: 255 ENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDG 314 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYI 296 SC++ IAG+A + F G+V + DG E SR G D + +G+DA Q + Sbjct: 315 SCRTPIAGYASKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQEL 371 >gi|296446253|ref|ZP_06888200.1| porphobilinogen deaminase [Methylosinus trichosporium OB3b] gi|296256290|gb|EFH03370.1| porphobilinogen deaminase [Methylosinus trichosporium OB3b] Length = 308 Score = 231 bits (590), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 128/296 (43%), Positives = 168/296 (56%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M IGTR SPLALA E R L P + I + T GD I +R L E GG Sbjct: 1 MTTAILTIGTRGSPLALAQTHEVRRLLAAALGAPEEALPIEIIRTTGDMIQDRPLAESGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT E++ L G ID AVHS+KD+PT L + I+ +LPRED+RD +I SL D Sbjct: 61 KGLFTRELDIALAEGRIDLAVHSSKDLPTHLPPEIAIAGFLPREDVRDAWIGRGGASLAD 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT+SLRR A + R R D+SV RG +ETRL+K+ + + LLA AG+KRL Sbjct: 121 LPQGAVVGTASLRRGAQVKRLRPDVSVTLLRGNVETRLHKVESGEVDGTLLALAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 IL +EDF P+ GQGAI I + + ++ + I T ++ ERAFL L Sbjct: 181 LADKATAILPLEDFLPAAGQGAIAITKRAGDARTRDALAPILDAATGAALAAERAFLTVL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 DGSC++ IA A G + F+G+ L +DG +E R G DA +G DAA I Sbjct: 241 DGSCRTPIAAHARVDGDAMEFHGLALRADGSEIYEARRRGAAIDAARLGDDAANEI 296 >gi|288957245|ref|YP_003447586.1| hydroxymethylbilane synthase [Azospirillum sp. B510] gi|288909553|dbj|BAI71042.1| hydroxymethylbilane synthase [Azospirillum sp. B510] Length = 312 Score = 231 bits (589), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 134/307 (43%), Positives = 175/307 (57%), Gaps = 2/307 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEI 58 M P RIGTR SPLALA A ETR L+ H P I I+ T GDRI +RTL E Sbjct: 1 MTTHPLRIGTRGSPLALAQAHETRDRLIAAHPHLAAPGAIEIVVFKTTGDRILDRTLAEA 60 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLFT+E+E+ L G D AVHS KD+PT+L GL+I+ LPRED RD F S + L Sbjct: 61 GGKGLFTKELEEALFDGRADLAVHSMKDVPTQLPDGLEIATLLPREDPRDAFFSRSGGGL 120 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 DL +V+GT+ LRR+A +L R D+ + RG ++TRL+KL+ + A LLA AG++R Sbjct: 121 ADLPAGAVVGTAGLRRQAQVLELRPDLRIFPLRGNVQTRLSKLDAGEVDATLLALAGLRR 180 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L I +L E P+ QGAI IE + + L+ +N +T V ERA LA Sbjct: 181 LGLTGRISAVLEPETMLPAVAQGAIGIEIRSADDATRALLAPLNCAETMVRVTAERALLA 240 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 LDGSC++ IA A G L+ VL+ DG+ R G +A ++G DA IR Sbjct: 241 ALDGSCRTPIAALALLDGDALHLRAKVLSCDGRSIFRAERRGKAANAESLGADAGAEIRA 300 Query: 299 ISNKNVF 305 + F Sbjct: 301 QLPPDFF 307 >gi|218190145|gb|EEC72572.1| hypothetical protein OsI_06012 [Oryza sativa Indica Group] Length = 358 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 127/307 (41%), Positives = 182/307 (59%), Gaps = 7/307 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR L H + I+ + T GD I ++ L +IGGKGL Sbjct: 50 IRIGTRGSPLALAQAHETRDKLKAAHSELAEEGAVEIVIIKTTGDMILDKPLADIGGKGL 109 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L Sbjct: 110 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTASSLAELPA 169 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+G++SLRR++ +L + V++FRG ++TRL KL HA LLA AG+KRL + Sbjct: 170 GSVVGSASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLNMAE 229 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +L++++ P+ QGAI I ++ + +NHEDT +V CER FL+ LDG+ Sbjct: 230 TATSVLSVDEMLPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLAVACEREFLSVLDGN 289 Query: 244 CKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIRFI 299 C++ IA +A K F G++ + DG +E SR G+ D + +G+DA ++ Sbjct: 290 CRTPIAAYASRDKDGNCSFRGLLASPDGSTVYETSRTGSY-DFDIMVEMGKDAGHELKAK 348 Query: 300 SNKNVFN 306 + F+ Sbjct: 349 AGPGFFD 355 >gi|168034136|ref|XP_001769569.1| predicted protein [Physcomitrella patens subsp. patens] gi|162679111|gb|EDQ65562.1| predicted protein [Physcomitrella patens subsp. patens] Length = 361 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 135/305 (44%), Positives = 186/305 (60%), Gaps = 4/305 (1%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR SPLALA A++TR L H + I+ + T GD+I ++ L +IGGKGLF Sbjct: 57 RIGTRGSPLALAQAYQTRDKLKAAHPELAEEGALDIVIIKTTGDKILSQPLADIGGKGLF 116 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+EI+ L++G+ID AVHS KD+PT L +G + LPRED+RD FI SL +L Sbjct: 117 TKEIDDALLNGDIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICPKYSSLAELPEG 176 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SV+G++SLRR++ LL + V++FRG ++TRL KLN A LLA AG+KRL + Sbjct: 177 SVVGSASLRRQSQLLHRYPHLQVVNFRGNVQTRLRKLNEGVCAATLLALAGLKRLDMTEH 236 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I IL +D P+ QGAI I + K +E + +NHEDT +++CERAFLA+LDGSC Sbjct: 237 ITAILETDDMLPAIAQGAIGIACRTGDTKMEEYLASLNHEDTRLAISCERAFLAKLDGSC 296 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFISNK 302 ++ IAG A F G+V +DGK E SR G+ D I + +DA Q + + Sbjct: 297 RTPIAGLAQRTEDGCLFRGLVATTDGKQVLETSRTGSFSYDDMIALAQDAGQELISRAGP 356 Query: 303 NVFNF 307 F + Sbjct: 357 GFFQW 361 >gi|115444475|ref|NP_001046017.1| Os02g0168800 [Oryza sativa Japonica Group] gi|75259105|sp|Q6H6D2|HEM3_ORYSJ RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase; Flags: Precursor gi|49388602|dbj|BAD25717.1| putative porphobilinogen deaminase [Oryza sativa Japonica Group] gi|113535548|dbj|BAF07931.1| Os02g0168800 [Oryza sativa Japonica Group] gi|222622259|gb|EEE56391.1| hypothetical protein OsJ_05540 [Oryza sativa Japonica Group] Length = 358 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 126/306 (41%), Positives = 181/306 (59%), Gaps = 5/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR L H + I+ + T GD I ++ L +IGGKGL Sbjct: 50 IRIGTRGSPLALAQAHETRDKLKAAHSELAEEGAVEIVIIKTTGDMILDKPLADIGGKGL 109 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L Sbjct: 110 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTASSLAELPA 169 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+G++SLRR++ +L + V++FRG ++TRL KL HA LLA AG+KRL + Sbjct: 170 GSVVGSASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLNMAE 229 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +L++++ P+ QGAI I ++ + +NHEDT +V CER FL+ LDG+ Sbjct: 230 TATSVLSVDEMLPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLAVACEREFLSVLDGN 289 Query: 244 CKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFIS 300 C++ IA +A K F G++ + DG +E SR G + + +G+DA ++ + Sbjct: 290 CRTPIAAYASRDKDGNCSFRGLLASPDGSTVYETSRTGPYDFDIMVEMGKDAGHELKAKA 349 Query: 301 NKNVFN 306 F+ Sbjct: 350 GPGFFD 355 >gi|254511195|ref|ZP_05123262.1| porphobilinogen deaminase [Rhodobacteraceae bacterium KLH11] gi|221534906|gb|EEE37894.1| porphobilinogen deaminase [Rhodobacteraceae bacterium KLH11] Length = 318 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 123/276 (44%), Positives = 168/276 (60%), Gaps = 5/276 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIGG 60 P +IGTR SPLALA A+ETR L +P I+ + T GD +R L E+G Sbjct: 11 PLKIGTRGSPLALAQAYETRRRLSTAFDLPEDAFEIVVIKTTGDNRAMIDADRPLKEVGN 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ ++ GEID AVHS KDMP +GL + +LPRED+RD FIS S+ D Sbjct: 71 KGLFTKEIEEAMLKGEIDIAVHSTKDMPVAQPQGLVLDTFLPREDVRDAFISPGLNSIHD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG++RL+ Sbjct: 131 LPRGAVVGTSSLRRRAQLLNRRPDLKVVEFRGNVQTRLKKLADGVADCTFLAMAGLRRLE 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V ++ +D P+ QGAI IE ++ +A ++ I+H +T + ER+ LA L Sbjct: 191 MADVPATAISPDDMLPAIAQGAIGIERRNDDSRAAGMLAAIHHPETAQRLAAERSLLAGL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG-KIFHE 275 DGSC++ IAG A + L G VL DG + HE Sbjct: 251 DGSCETPIAGLAEIRDGQLRLRGEVLRPDGTESIHE 286 >gi|224008054|ref|XP_002292986.1| porphobilinogen deaminase [Thalassiosira pseudonana CCMP1335] gi|220971112|gb|EED89447.1| porphobilinogen deaminase [Thalassiosira pseudonana CCMP1335] Length = 330 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 124/309 (40%), Positives = 181/309 (58%), Gaps = 8/309 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN----IVIIPLSTKGDRITNRTLTEIGG 60 P RIGTR SPLALA A+ETR L + P I I + T+GD I +++L E+GG Sbjct: 9 PLRIGTRGSPLALAQAYETRRRL--IENFPELEAEGAIEICVMKTQGDMILDKSLMELGG 66 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSL 118 KGLFT+E++ L+ E+D VHS KD+PT L +G + LPRED D FI+ + + Sbjct: 67 KGLFTKELDTALLGDEVDICVHSMKDVPTWLPEGTVLPCNLPREDTNDAFITANGDIKRI 126 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 DL +SVIGT+SLRR+A +L + ++FRG ++TRL KL++ A LLA AG+KR Sbjct: 127 ADLPDNSVIGTASLRRQAQILAQNPTLKCVNFRGNVQTRLRKLDDGVVDATLLAIAGLKR 186 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + IL ++ P+ QGAI I+ ++ ++ + + +N DT VNCERAFL Sbjct: 187 MDMDDCATAILEWDEMLPAVAQGAIGIQCRSDDTRSLKYIDALNCMDTHVCVNCERAFLE 246 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 LDG+CK+ IAG A + F G++ DG + +E G DA+ IGR A + ++ Sbjct: 247 ALDGNCKTPIAGQARIVDGKIVFKGLIAMPDGSLKYETEATGEIADAVEIGRKAGEELKA 306 Query: 299 ISNKNVFNF 307 + + F Sbjct: 307 QAGEKFFEM 315 >gi|154251802|ref|YP_001412626.1| porphobilinogen deaminase [Parvibaculum lavamentivorans DS-1] gi|154155752|gb|ABS62969.1| porphobilinogen deaminase [Parvibaculum lavamentivorans DS-1] Length = 308 Score = 228 bits (581), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 131/305 (42%), Positives = 182/305 (59%), Gaps = 1/305 (0%) Query: 3 KKPFRIGTRCSPLALAHAFET-RSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++ +RIGTR S LAL A E R + +H I+ +ST GDR+ +R L+EIGGK Sbjct: 2 QRRYRIGTRGSRLALIQANEVARRIALALHAPVEEVTEIVVISTAGDRVQDRALSEIGGK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFTEEIE++L ID AVHS KDMPT L +GL I L R D RD F+S A SL L Sbjct: 62 GLFTEEIEEQLADARIDVAVHSMKDMPTLLPEGLVIDCLLERADPRDAFLSSKANSLMSL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSSLRR A + R D++V+ FRG ++TRL KL + A A LLA AG+ R+ Sbjct: 122 PQGAVVGTSSLRRAAQVRARRPDVTVVPFRGNVDTRLKKLADGVADATLLAMAGLTRMDL 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + L+ E+ P+ QGAI IE + +A L++ ++H +T V ERAFLA LD Sbjct: 182 LECVTAPLSPEELLPAVAQGAIGIERRAADDEAAHLLEKLHHTETGLRVAAERAFLAVLD 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC++ IA A G + ++L DG HE R G DA+ +G+DA + ++ + Sbjct: 242 GSCRTPIAALAEISGDHMRLRTMILTPDGAEIHETEREGLAADAVLLGQDAGEELKGRAG 301 Query: 302 KNVFN 306 + F+ Sbjct: 302 PHFFD 306 >gi|21592624|gb|AAM64573.1| hydroxymethylbilane synthase [Arabidopsis thaliana] Length = 382 Score = 228 bits (581), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 131/297 (44%), Positives = 183/297 (61%), Gaps = 6/297 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A+ETR L H + I I + T GD+I ++ L +IGGKGL Sbjct: 75 IRIGTRGSPLALAQAYETREKLKKKHPELVEDGAIHIEIIKTTGDKILSQPLADIGGKGL 134 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+G ID AVHS K +PT L + + LPRED+RD FI TA +L +L Sbjct: 135 FTKEIDEALINGHIDIAVHSMKYVPTYLPEKTILPCNLPREDVRDAFICLTAATLAELPA 194 Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SV+GT+SLRRK+ +L + V + FRG ++TRL+KL K A LLA AG+KRL Sbjct: 195 GSVVGTASLRRKSQILHKYPALHVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSMT 254 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + IL++++ P+ QGAI I ++ K + +NHE+T +++CERAFL LDG Sbjct: 255 ENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDG 314 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYI 296 SC++ IAG+A + F G+V + DG E SR G D + +G+DA Q + Sbjct: 315 SCRTPIAGYASKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQEL 371 >gi|190683048|gb|ACE81820.1| hydroxymethylbilane synthetase [Oxyrrhis marina] Length = 395 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 128/301 (42%), Positives = 181/301 (60%), Gaps = 3/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLALA A + S + + I I +ST+GDRI +R L ++GGKGLFT Sbjct: 76 LRIGTRGSPLALAQARDVESRAREQLQ-QGGEIDICVISTEGDRILDRALADVGGKGLFT 134 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+++ L+SGE+DC VHS KD+PT + G +I AYLPRED RDVF+S +L DL + Sbjct: 135 KELDRALLSGEVDCCVHSMKDVPTTVAPGTEIVAYLPREDTRDVFLSAKYATLADLPDGA 194 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GT+SLRR+A +L + ++ V +FRG ++TRL KL LAYAG+KRL Sbjct: 195 VVGTASLRRQAQILAQK-NVVVTNFRGNVQTRLRKLAAGTVDCTFLAYAGLKRLGMLAEA 253 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++L D P+ QGA+ I+ N+ + + ++HE T +V ERAFL LDGSC+ Sbjct: 254 TQVLEWSDMLPAIAQGAVGIQIRSNDAALRGTLSQLDHEPTRLAVETERAFLRALDGSCR 313 Query: 246 SAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + IAG A+ S L F G VL++DGK E + CD +G+ +R + + Sbjct: 314 TPIAGQAWIGPDSRLAFRGQVLSADGKQRFERVGDCLPCDGPELGKTLGDDLRREAGEEF 373 Query: 305 F 305 F Sbjct: 374 F 374 >gi|302756929|ref|XP_002961888.1| hypothetical protein SELMODRAFT_164683 [Selaginella moellendorffii] gi|300170547|gb|EFJ37148.1| hypothetical protein SELMODRAFT_164683 [Selaginella moellendorffii] Length = 353 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 132/314 (42%), Positives = 190/314 (60%), Gaps = 17/314 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A++TR L H + + I+ + T GD+I N+ L +IGGKGL Sbjct: 44 IRIGTRGSPLALAQAYQTRDLLKGAHPELAEDGALEIVIIKTTGDKILNQPLADIGGKGL 103 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ ID AVHS KD+PT L +G + L RED RD FIS A+SL +L Sbjct: 104 FTKEIDDALLDNRIDIAVHSMKDVPTYLPQGTILPCNLRREDARDAFISLKAKSLAELPP 163 Query: 124 HSVIGTSSLRRKALLLRWRSDISV-IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SV+GT+SLRRK+ +L+ + V +FRG ++TRL KL A LLA AG+KRL Sbjct: 164 GSVVGTASLRRKSQILKRYPHLQVDTNFRGNVQTRLKKLQEGIVTATLLALAGLKRLNMT 223 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + +L +++ P+ QGAI I + K + + +NHE+T +V+CERAFL LDG Sbjct: 224 EHVTGVLPMDEMLPAIAQGAIGIACRQGDEKMERYLASLNHEETRLAVSCERAFLEMLDG 283 Query: 243 SCKSAIAGFAY-------CKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAA 293 SC++ IAG+A+ CK F G+V + DG E +R+G N + + +G+DAA Sbjct: 284 SCRTPIAGYAHRDKLTDECK-----FRGLVASPDGTQVLETTRSGQYNLDEMVAMGKDAA 338 Query: 294 QYIRFISNKNVFNF 307 + + S ++ N+ Sbjct: 339 KELLSKSGPSLLNW 352 >gi|303274460|ref|XP_003056550.1| porphobilinogen deaminase, chloroplast precursor [Micromonas pusilla CCMP1545] gi|226462634|gb|EEH59926.1| porphobilinogen deaminase, chloroplast precursor [Micromonas pusilla CCMP1545] Length = 376 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 125/305 (40%), Positives = 184/305 (60%), Gaps = 8/305 (2%) Query: 7 RIGTRCSPLALAHAFETRSSL----MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +IGTR SPLALA A+ TR L +++ + I II T GD++ ++ L +IGGKG Sbjct: 64 KIGTRGSPLALAQAYMTRDLLKKNFVELSEEGALEICII--KTTGDKVLDQPLADIGGKG 121 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT E++ L+ G ID AVHS KD+PT L +G + LPRED+RD FIS L +L Sbjct: 122 LFTRELDVALLDGRIDIAVHSMKDVPTYLPEGSILPCMLPREDVRDAFISVKYDDLSELP 181 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GT+SLRR++ LL + ++FRG +++R+ KL LLA AG+ R+ Sbjct: 182 DGALVGTASLRRQSQLLAKFPTLKCVNFRGNVQSRIRKLQEGVVDCTLLAIAGLNRMDMT 241 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + +IL + P+ QGAI I + + E ++ +NHE+T +V CERAFLA LDG Sbjct: 242 EHATKILETDVMLPAVAQGAIGIACRTGDSRQLEFLEKLNHEETRIAVECERAFLASLDG 301 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFIS 300 SC++ IAG+AY G+ L F G+V + DGK E +R+ N DAI+ G+DA ++ ++ Sbjct: 302 SCRTPIAGYAYKSGNNLEFRGLVASLDGKQILETTRSSNWSFTDAIDAGKDAGNELKALA 361 Query: 301 NKNVF 305 F Sbjct: 362 PSEFF 366 >gi|302817137|ref|XP_002990245.1| hypothetical protein SELMODRAFT_447969 [Selaginella moellendorffii] gi|300141954|gb|EFJ08660.1| hypothetical protein SELMODRAFT_447969 [Selaginella moellendorffii] Length = 353 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 132/314 (42%), Positives = 190/314 (60%), Gaps = 17/314 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A++TR L H + + I+ + T GD+I N+ L +IGGKGL Sbjct: 44 IRIGTRGSPLALAQAYQTRDLLKGAHPELAEDGALEIVIIKTTGDKILNQPLADIGGKGL 103 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ ID AVHS KD+PT L +G + L RED RD FIS A+SL +L Sbjct: 104 FTKEIDDALLDNRIDIAVHSMKDVPTYLPQGTILPCNLRREDARDAFISLKAKSLAELPP 163 Query: 124 HSVIGTSSLRRKALLLRWRSDISV-IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SV+GT+SLRRK+ +L+ + V +FRG ++TRL KL A LLA AG+KRL Sbjct: 164 GSVVGTASLRRKSQILKRYPHLQVDTNFRGNVQTRLKKLQEGIVTATLLALAGLKRLNMT 223 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + +L +++ P+ QGAI I + K + + +NHE+T +V+CERAFL LDG Sbjct: 224 EHVTGVLPMDEMLPAIAQGAIGIACRQGDEKMERYLASLNHEETRLAVSCERAFLEMLDG 283 Query: 243 SCKSAIAGFAY-------CKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAA 293 SC++ IAG+A+ CK F G+V + DG E +R+G N + + +G+DAA Sbjct: 284 SCRTPIAGYAHRDKLTDECK-----FRGLVASPDGTQVLETTRSGQYNFDEMVAMGKDAA 338 Query: 294 QYIRFISNKNVFNF 307 + + S ++ N+ Sbjct: 339 KELLSKSGPSLLNW 352 >gi|289548019|ref|YP_003473007.1| porphobilinogen deaminase [Thermocrinis albus DSM 14484] gi|289181636|gb|ADC88880.1| porphobilinogen deaminase [Thermocrinis albus DSM 14484] Length = 300 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 122/291 (41%), Positives = 180/291 (61%), Gaps = 6/291 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + L D+ H + ++P++T GD+IT+ L +IGGKGLF Sbjct: 3 IRIGTRRSQLALWQANYVKRKLEDMG----HTVELVPITTTGDKITDAPLAKIGGKGLFV 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G+ID AVHS KD+PTKL GL + A RE DV IS Q L++L + Sbjct: 59 KEIEEALLRGDIDVAVHSLKDVPTKLPDGLTLGAITERELPYDVLISRDGQRLENLPTGA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRRK + R R D+ + D RG ++TR+ KL+ + AI+LAYAGI+R+ E I Sbjct: 119 VVGTSSLRRKVQIKRMRRDLVIKDLRGNVDTRIRKLDEGQYDAIVLAYAGIRRMGWENRI 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +IL EDF P+ GQG++ +E ++ K +E++ +++H ++ V ERAFL ++G C+ Sbjct: 179 VQIL--EDFIPAVGQGSMAVEIREDDEKIREVISLLDHRESRIRVEAERAFLEVMEGGCQ 236 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + A+ GS L+ G + +G+ F E GN A +GR+ A+ I Sbjct: 237 VPMGAIAWLDGSRLFMKGFLSDLEGENFVEAYVEGNVEKAQLLGRELAEKI 287 >gi|168057909|ref|XP_001780954.1| predicted protein [Physcomitrella patens subsp. patens] gi|162667588|gb|EDQ54214.1| predicted protein [Physcomitrella patens subsp. patens] Length = 299 Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 127/299 (42%), Positives = 179/299 (59%), Gaps = 4/299 (1%) Query: 13 SPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEK 70 SPLALA A++TR L H + II + T GD+I ++ L +IGGKGLFT+EI+ Sbjct: 1 SPLALAQAYQTRDKLKAAHPGLAEEGALEIIIIKTTGDKILSQPLADIGGKGLFTKEIDD 60 Query: 71 KLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTS 130 L++G+ID AVHS KD+PT L +G + LPRED+RD FI SL +L SV+G++ Sbjct: 61 ALLNGDIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICPNYSSLAELPEGSVVGSA 120 Query: 131 SLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILN 190 SLRR++ +L + V +FRG ++TRL KL+ A LLA AG+KRL + I IL Sbjct: 121 SLRRQSQILHKYPHLKVENFRGNVQTRLRKLSEGTVQATLLALAGLKRLDMTEHITAILA 180 Query: 191 IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250 +D P+ QGAI I + K +E + +NHE T +++CERAFLA+LDGSC++ IAG Sbjct: 181 TDDMLPAIAQGAIGIACRTGDSKMEEYLASLNHEGTRLAISCERAFLAKLDGSCRTPIAG 240 Query: 251 FAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFISNKNVFNF 307 A F G+V +DGK E SR G+ D I + +DA + + + F + Sbjct: 241 LAERTEDGCSFRGLVATTDGKQVLETSRKGSFSYDDMIALAQDAGAELISRAGPDFFKW 299 >gi|294676723|ref|YP_003577338.1| hydroxymethylbilane synthase [Rhodobacter capsulatus SB 1003] gi|12280937|gb|AAG50298.1| porphobilinogen deaminase [Rhodobacter capsulatus] gi|294475543|gb|ADE84931.1| hydroxymethylbilane synthase [Rhodobacter capsulatus SB 1003] Length = 317 Score = 225 bits (573), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 126/305 (41%), Positives = 178/305 (58%), Gaps = 4/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT----NRTLTEIGG 60 P +IGTR SPLALA AFETRS LM +P I+ + T GD ++ L E+GG Sbjct: 10 PLKIGTRGSPLALAQAFETRSRLMAAFDLPEEAFEIVVIKTSGDNAALIAADKPLKEVGG 69 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ +++G ID AVHS KDMPT +GL + YLPRED RD F+S SL + Sbjct: 70 KGLFTKEIEEAMLAGSIDIAVHSMKDMPTLQPEGLILDCYLPREDTRDAFVSMKYNSLAE 129 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A L R D+ +++FRG ++TR+ KL A A LA AG+ RL Sbjct: 130 LPEGAVVGTSSLRRRAQLAARRPDLKMVEFRGNVQTRMKKLGEGVADATFLALAGLNRLG 189 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +V K + ED P+ QG I IE + +A+ L+ I+H + + CER+FL L Sbjct: 190 MSEVAKSAIEPEDMLPAVAQGCIGIERREADTRAKMLLDAIHHAPSGLRLACERSFLLTL 249 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ I G + +G ++ G +L DG G D + +G + A+ + + Sbjct: 250 DGSCETPIGGLSVLEGDQIWLRGEILRPDGSETITGEIRGPAADGVALGAELAKQLLAKA 309 Query: 301 NKNVF 305 + F Sbjct: 310 PADFF 314 >gi|154245106|ref|YP_001416064.1| porphobilinogen deaminase [Xanthobacter autotrophicus Py2] gi|154159191|gb|ABS66407.1| porphobilinogen deaminase [Xanthobacter autotrophicus Py2] Length = 317 Score = 225 bits (573), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 121/302 (40%), Positives = 172/302 (56%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLAL A +++L + I + + T GD+I +R L+E GGKGLFT Sbjct: 16 LRIGTRGSPLALWQAHAVQAALAVALGVEKEAIAVEVIKTSGDQIQDRALSEAGGKGLFT 75 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G +D AVHSAKD+ T L GL ++ YLPR D+RD I + +L DL + Sbjct: 76 KEIEEALLDGRVDLAVHSAKDVATVLPDGLHLAGYLPRADVRDALILKSGAALADLPAGA 135 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT+SLRR+A L R R D+ V RG + TRL K+ + A LLA AG+ RL + Sbjct: 136 KVGTASLRREAQLRRIRPDLKVELLRGNVHTRLAKVKDGDFDATLLALAGLTRLGMAQAA 195 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +L +DF P+ GQGA+ IE + +P + I DT ++ ERAFLA LDGSC+ Sbjct: 196 SCVLATDDFLPAVGQGAVAIECRIADPDTNAAIAAIACRDTGIALEAERAFLAALDGSCR 255 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG A +G ++ G+VL+ DG E++ DA +G + +R + Sbjct: 256 TPIAGLATVEGESVRLRGLVLSPDGSDAAEIAELAPIADAARLGAECGARLRTSAPARAL 315 Query: 306 NF 307 Sbjct: 316 GL 317 >gi|260431649|ref|ZP_05785620.1| porphobilinogen deaminase [Silicibacter lacuscaerulensis ITI-1157] gi|260415477|gb|EEX08736.1| porphobilinogen deaminase [Silicibacter lacuscaerulensis ITI-1157] Length = 320 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 130/307 (42%), Positives = 178/307 (57%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR----ITNRTLTEIGG 60 P +IGTR SPLALA A ETR L D +P I+ + T GD +R L EIG Sbjct: 11 PLKIGTRGSPLALAQAHETRQRLCDAFDLPEQAFEIVVIKTTGDNRAMIDADRPLKEIGN 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ ++ G ID AVHS KDMP + +GL + +LPRED+RD FIS S+ D Sbjct: 71 KGLFTKEIEEAMLGGYIDIAVHSTKDMPVEQPQGLVLDTFLPREDVRDAFISPRLNSIHD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A LL R D++V++FRG ++TRL KL + A LA AG++RL Sbjct: 131 LPEGAVVGTSSLRRRAQLLYRRPDLNVVEFRGNVQTRLKKLADGVAECTFLAMAGLRRLN 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + V ++ +D P+ QG I IE ++ +A E+++ I+H +T + ERA LA L Sbjct: 191 MQDVPATAISPDDMLPAIAQGTIGIERRADDHRAAEMLEAIHHPETAQRLAAERALLAAL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A L G VL DG + G DA +GR A + + Sbjct: 251 DGSCETPIAGLAEITDGQLRLRGEVLRPDGSESVVSEQMGATEDATEMGRAMASDLLRQA 310 Query: 301 NKNVFNF 307 F + Sbjct: 311 GPGFFEW 317 >gi|254488942|ref|ZP_05102147.1| porphobilinogen deaminase [Roseobacter sp. GAI101] gi|214045811|gb|EEB86449.1| porphobilinogen deaminase [Roseobacter sp. GAI101] Length = 297 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 123/291 (42%), Positives = 165/291 (56%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 +A A ETR+ L +P I+ + GD I +R L EIGGKGLFT EIE+ L++G+ Sbjct: 1 MAQAVETRARLSAAFDLPLTAFEIVVIKVTGDMIQDRPLKEIGGKGLFTREIEEDLLAGK 60 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 ID AVHS KDMPT GL + YLPRED RD F++ +L L +V+GTSSLRR+A Sbjct: 61 IDIAVHSMKDMPTVQPGGLLLDTYLPREDPRDAFVAPLMSALDQLTEGAVVGTSSLRRRA 120 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 LL R D+ V++FRG ++TRL KL + A LA AG+ RL E V ++ D P Sbjct: 121 QLLHKRPDLQVVEFRGNVQTRLRKLADGVAECTFLAMAGLNRLGMENVPATPIDDTDMLP 180 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + QGAI IE + + L+ I+ T + ERAFL LDGSC++ IAG A G Sbjct: 181 AVAQGAIGIERRAGDLDTEALLAAIHDTPTGQRLIAERAFLLTLDGSCETPIAGLATLDG 240 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307 TL+ G VL DG R+G D +G D A+ + + N F++ Sbjct: 241 DTLHLRGEVLRPDGSEVISGDRSGPIGDGGQMGVDLARELLSQAGPNFFDW 291 >gi|254440462|ref|ZP_05053956.1| porphobilinogen deaminase [Octadecabacter antarcticus 307] gi|198255908|gb|EDY80222.1| porphobilinogen deaminase [Octadecabacter antarcticus 307] Length = 321 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 118/308 (38%), Positives = 177/308 (57%), Gaps = 10/308 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE------- 57 P +IGTR SPLALA A ETR+ LM + + + T GD +R+L + Sbjct: 11 PLKIGTRGSPLALAQAHETRARLMVAFDLAEAAFEVCVIKTTGD---DRSLIDADIPLKV 67 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 IG KGLFT+EIE+ +++G+ID AVHS KDMP GL + +LPRED RD F+S Sbjct: 68 IGNKGLFTKEIEEAMLAGQIDIAVHSTKDMPVAQPDGLVLDVFLPREDARDAFVSVKYSG 127 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 + DL +++GTSSLRR+A LL R D++V++FRG ++TRL KL + A A LA AG+ Sbjct: 128 IPDLPEGAIVGTSSLRRRAQLLAKRPDLTVVEFRGNVQTRLKKLADGLADATFLAMAGLN 187 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + +++ D P+ QG I IE +++ +A++++ I+ + ER+FL Sbjct: 188 RMGMDDAAMGAIDLADMLPAIAQGTISIERRIDDLRARDMLAAIHDVQAGQQMAAERSFL 247 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 A LDGSC++ IAG A G ++ G +L DG R G + +G++ AQ + Sbjct: 248 AALDGSCETPIAGLAMIDGDNMWLRGEILKPDGSQVFTGERRGLVTEGRAMGKELAQELL 307 Query: 298 FISNKNVF 305 + + F Sbjct: 308 GQAGPDFF 315 >gi|209965647|ref|YP_002298562.1| porphobilinogen deaminase [Rhodospirillum centenum SW] gi|209959113|gb|ACI99749.1| porphobilinogen deaminase [Rhodospirillum centenum SW] Length = 323 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 131/298 (43%), Positives = 177/298 (59%), Gaps = 3/298 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGG 60 K+P RIGTR SPLALA A ETR L + H P I I+ + T GDRI +RTL E GG Sbjct: 2 KQPLRIGTRGSPLALAQAHETRRRLAEAHPHLAEPDAIEIVVIKTTGDRILDRTLMEAGG 61 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L + ID AVHS KD+PT GLQ++A LPRED RD + L + Sbjct: 62 KGLFTKEIEEALQAETIDLAVHSMKDVPTWRQTGLQLTAMLPREDPRDAWFCRHGCGLDE 121 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT+SLRR+A +L R D+ V+ FRG ++TR+ KL + A LLA AG++RL Sbjct: 122 LPAGAVVGTASLRRQAQILARRPDLKVVPFRGNVQTRMTKLAEGQVDATLLALAGLRRLG 181 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + + + P+ QGAI IET + LV +NH +T V ER LA L Sbjct: 182 LVEHMTAAIETDVMLPAVAQGAIGIETRAADDVTNALVAALNHAETMTRVTAERGVLATL 241 Query: 241 DGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 DGSC++ IA A G +L +V+ +G+ F+ R G+ DA +G DA Q ++ Sbjct: 242 DGSCRTPIAALAELPGDGSLTLSALVIRPNGQEFYRTERRGDPDDAEAMGIDAGQELK 299 >gi|254452699|ref|ZP_05066136.1| porphobilinogen deaminase [Octadecabacter antarcticus 238] gi|198267105|gb|EDY91375.1| porphobilinogen deaminase [Octadecabacter antarcticus 238] Length = 321 Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 120/309 (38%), Positives = 177/309 (57%), Gaps = 10/309 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE------- 57 P +IGTR SPLALA A ETR+ LM +P + + T GD +R+L + Sbjct: 11 PLKIGTRGSPLALAQAHETRARLMIAFDLPESAFEVCVIKTSGD---DRSLIDADIPLKV 67 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 IG KGLFT+EIE+ +++G ID AVHS KDMP GL ++ +LPRED RD F+S Sbjct: 68 IGNKGLFTKEIEEAMLAGRIDIAVHSTKDMPVAQPDGLVLNVFLPREDARDAFVSVKYAG 127 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 + DL +++GTSSLRR+A LL R D++V++FRG ++TRL KL + A A LA AG+ Sbjct: 128 IADLPEGAIVGTSSLRRRAQLLVKRPDLTVVEFRGNVQTRLKKLADGLADATFLAMAGLN 187 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ ++++D P+ QG I IE V++ +A++++ I++ + ERAFL Sbjct: 188 RMGMHDAAIGAIDLDDMLPAIAQGTISIERRVDDLRARDMLAAIHNVQAGQQMAAERAFL 247 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 A LDGSC++ IAG A ++ G +L DG R G + +G + AQ + Sbjct: 248 AALDGSCETPIAGLAMIDCDQMWLRGEILKPDGSQVFTGERRGLVSEGAAMGMELAQELL 307 Query: 298 FISNKNVFN 306 + + F Sbjct: 308 GQAGPDFFE 316 >gi|194707246|gb|ACF87707.1| unknown [Zea mays] gi|223947939|gb|ACN28053.1| unknown [Zea mays] Length = 356 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 132/306 (43%), Positives = 184/306 (60%), Gaps = 5/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGL Sbjct: 48 IRIGTRGSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGL 107 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L Sbjct: 108 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPA 167 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+G++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RLK + Sbjct: 168 GSVVGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLKMAE 227 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+ Sbjct: 228 NATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVTCEREFLAVLDGN 287 Query: 244 CKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFIS 300 C++ IA +AY K F G++ + DG E +R+G D + +G+DA ++ + Sbjct: 288 CRTPIAAYAYRDKDGNCSFRGLLSSPDGSKVFETARSGPYSFDDMVEMGKDAGHELKAKA 347 Query: 301 NKNVFN 306 F+ Sbjct: 348 GPGFFD 353 >gi|212275007|ref|NP_001130048.1| hypothetical protein LOC100191140 [Zea mays] gi|194688160|gb|ACF78164.1| unknown [Zea mays] Length = 394 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 132/297 (44%), Positives = 181/297 (60%), Gaps = 5/297 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGL Sbjct: 48 IRIGTRGSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGL 107 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L Sbjct: 108 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPA 167 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+G++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RLK + Sbjct: 168 GSVVGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLKMAE 227 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+ Sbjct: 228 NATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVTCEREFLAVLDGN 287 Query: 244 CKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIR 297 C++ IA +AY K F G++ + DG E +R+G D + +G+DA +R Sbjct: 288 CRTPIAAYAYRDKDGNCSFRGLLSSPDGSKVFETARSGPYSFDDMVEMGKDAGHELR 344 >gi|170749246|ref|YP_001755506.1| porphobilinogen deaminase [Methylobacterium radiotolerans JCM 2831] gi|170655768|gb|ACB24823.1| porphobilinogen deaminase [Methylobacterium radiotolerans JCM 2831] Length = 307 Score = 222 bits (566), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 122/291 (41%), Positives = 174/291 (59%), Gaps = 2/291 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +P RIGTR SP+ALA R ++ + P ++ ++T D+I +R L+EIGG Sbjct: 1 MLNRPLRIGTRGSPMALAQTGMVRDRIVAAN--PGLETELVVVTTVADKILDRPLSEIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ L +GE+D AVHS KD+ T L GL I+ L R+D RD F+S A L Sbjct: 59 KGLFTKELEQALFAGEVDVAVHSMKDVETWLPDGLTIACILERDDPRDAFLSPHADGLAG 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LA + +GTSSLRR A +L R D+ V+ RG TR+ KL + A LLA AG++RL Sbjct: 119 LAAGARVGTSSLRRGAQVLMRRPDLRVVPLRGNANTRMRKLEAGECDATLLALAGLQRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E + + +L++E+ P+ QGA+ IE ++ ++L+ I E T +V+ ERA LAEL Sbjct: 179 LESMARSVLSVEEMLPAVAQGALGIECRADDAVIRDLLAPIACERTTVAVSAERALLAEL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 DGSC++ IA A G +L G++ DG SR G +A IGR+ Sbjct: 239 DGSCRTPIAALAQIDGDSLRIDGLLFLPDGSRHWAASRQGLVAEAERIGRE 289 >gi|242060650|ref|XP_002451614.1| hypothetical protein SORBIDRAFT_04g004640 [Sorghum bicolor] gi|241931445|gb|EES04590.1| hypothetical protein SORBIDRAFT_04g004640 [Sorghum bicolor] Length = 340 Score = 221 bits (563), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 123/299 (41%), Positives = 177/299 (59%), Gaps = 5/299 (1%) Query: 13 SPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEK 70 S LALA A ETR L H + II + T GD I ++ L +IGGKGLFT+EI+ Sbjct: 41 SDLALAQARETRDKLKAAHSELAEEGAVEIIIIKTTGDMILDKPLADIGGKGLFTKEIDD 100 Query: 71 KLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTS 130 ++ G ID AVHS KD+PT L +G + LPRED RD FI TA SL +L V+G++ Sbjct: 101 AILQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDARDAFICLTANSLAELPSGCVVGSA 160 Query: 131 SLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILN 190 SLRR++ +L + V++ RG ++TRL KL N HA LLA AG+KRL + + IL+ Sbjct: 161 SLRRQSQILCRYPSLKVVNLRGNVQTRLTKLKNGDVHATLLALAGLKRLNMVENVTSILS 220 Query: 191 IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250 +E+ P+ QGAI I N+ K E + +NHEDT +V CER FL LDG+C++ IA Sbjct: 221 MEEMLPAVAQGAIGIACRSNDNKMMEYLSSLNHEDTRSAVACEREFLTVLDGNCRTPIAA 280 Query: 251 FAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFISNKNVFN 306 +A+ K + F G++ + DG +E +R G D + +G+DA ++ + ++ Sbjct: 281 YAHRDKDGSCSFRGLLASPDGSKVYETTRIGPYSFDDMVEMGKDAGHELKAKAGPGFYD 339 >gi|89894971|ref|YP_518458.1| hypothetical protein DSY2225 [Desulfitobacterium hafniense Y51] gi|219669373|ref|YP_002459808.1| porphobilinogen deaminase [Desulfitobacterium hafniense DCB-2] gi|123091755|sp|Q24VC8|HEM3_DESHY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800248|sp|B8G2M2|HEM3_DESHD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|89334419|dbj|BAE84014.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219539633|gb|ACL21372.1| porphobilinogen deaminase [Desulfitobacterium hafniense DCB-2] Length = 308 Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 122/290 (42%), Positives = 174/290 (60%), Gaps = 4/290 (1%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +IGTR S LAL A + L + + P V++P+ TKGD+I + L +IG KGLFT+ Sbjct: 5 KIGTRDSQLALWQAEWVKRKLEEYY--PEREFVLVPMKTKGDKILDVPLAKIGDKGLFTK 62 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 E+E L++GEIDCAVHS KD+PT L GL+I+A+ RE+ RDVF+S L L S+ Sbjct: 63 ELEVGLLNGEIDCAVHSLKDLPTVLPPGLEIAAFCEREEPRDVFLSKDGTPLGSLPAGSI 122 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGTSSLRRKA L +RSD+S D RG ++TR KL + I+LA AG+KRL E I Sbjct: 123 IGTSSLRRKAQLQNYRSDLSFADLRGNLQTRWRKLQESDMAGIVLAAAGVKRLGWEDRIT 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E ++ E + GQGAI +E +E++ ++NH DT +V ERA L L+G C+ Sbjct: 183 EYISEEIMLSAVGQGAIAVEIAAQRADVREMLDLLNHGDTERAVKAERALLYRLEGGCQI 242 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A + + G+V + DG+ +V+ +G + +GR AA + Sbjct: 243 PIGAWAVTEQQQIVLKGMVASLDGQRILKVTLSGEHPE--ELGRQAADLL 290 >gi|219117329|ref|XP_002179459.1| hydroxymethylbilane synthase [Phaeodactylum tricornutum CCAP 1055/1] gi|217409350|gb|EEC49282.1| hydroxymethylbilane synthase [Phaeodactylum tricornutum CCAP 1055/1] Length = 329 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 122/309 (39%), Positives = 180/309 (58%), Gaps = 8/309 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIP----PHNIVIIPLSTKGDRITNRTLTEIG 59 +P RIGTR SPLALA A+ETR L + P I I L T+GD I +++L E+G Sbjct: 7 QPLRIGTRGSPLALAQAYETRKRL--IENFPDLEAEGAIEICVLKTQGDMILDKSLMELG 64 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI--SHTAQS 117 GKGLFT+E++ L+S E+D VHS KD+PT L G + LPRED D FI + + Sbjct: 65 GKGLFTKELDTALLSDEVDICVHSMKDVPTWLPDGTVLPCNLPREDTNDAFIYKDDSVKR 124 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 ++D+ SVIGT+SLRR+A L+ + ++FRG ++TRL KL++ A LLA AG+K Sbjct: 125 IEDIPDGSVIGTASLRRQAQLMAKNPTLKCVNFRGNVQTRLRKLDDGVVDATLLAIAGLK 184 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + IL ++ P+ QGAI I+ ++ ++ + + +NH +T V+CER FL Sbjct: 185 RMDMDGCATSILEWDEMLPAVAQGAIGIQCRDDDERSLKYLAALNHPETKACVDCERGFL 244 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 LDG+CK+ IAG A + F G++ DG E G +A IGR+A + ++ Sbjct: 245 EALDGNCKTPIAGQARIVDGKIMFRGLIAMPDGSKKFECESEGAIEEAAKIGREAGEGLK 304 Query: 298 FISNKNVFN 306 + + F Sbjct: 305 KEAGEEFFQ 313 >gi|218533190|ref|YP_002424006.1| porphobilinogen deaminase [Methylobacterium chloromethanicum CM4] gi|218525493|gb|ACK86078.1| porphobilinogen deaminase [Methylobacterium chloromethanicum CM4] Length = 309 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 123/303 (40%), Positives = 175/303 (57%), Gaps = 3/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIGTR SP+ALA R ++ + P I+ +ST DR+ +R L+EIGGKGL Sbjct: 5 RALRIGTRGSPMALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDLA 122 FT+E+E+ L + EID AVHS KD+ T L GL I+ L R+D RD F+S + A L DL Sbjct: 63 FTKELEQALFADEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADLP 122 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR A +L R D++++ RG TR+ KL + A LLA AG++RL E Sbjct: 123 PGARVGTSSLRRGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGME 182 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V + +L++E+ P+ QGA+ IE + + L+ + T +++ ER LAELDG Sbjct: 183 DVARSVLSVEEMLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELDG 242 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC++ IA A KG + G++ DG EV R G DA IGRDA ++ + Sbjct: 243 SCRTPIAALAQVKGDRISLDGLLFLPDGSRHWEVHREGLAADADAIGRDAGAELKRAAGD 302 Query: 303 NVF 305 F Sbjct: 303 VYF 305 >gi|158421885|ref|YP_001523177.1| porphobilinogen deaminase [Azorhizobium caulinodans ORS 571] gi|158328774|dbj|BAF86259.1| porphobilinogen deaminase [Azorhizobium caulinodans ORS 571] Length = 313 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 121/300 (40%), Positives = 162/300 (54%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR SPLAL A R +L P +I I + T GD I +R L+E GGKGLFT+E Sbjct: 14 IGTRGSPLALWQAHAVRDALAAALARPVESISITVIRTSGDSIQDRALSEAGGKGLFTKE 73 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE++L+ G ID AVHSAKDM T L GL +S +LPR D+RD I +SL DL + I Sbjct: 74 IEEQLLDGRIDLAVHSAKDMATALPDGLFLSGFLPRADVRDALILREGKSLADLPAGARI 133 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+SLRR+A L R R D+ V RG + TRL K+ LLA AG+ RL Sbjct: 134 GTASLRREAQLRRLRPDLDVSLLRGNVHTRLAKVREGTFDGTLLALAGLTRLGLAHEASA 193 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L+ + F P+ GQGA+ IE+ V + + I T ++ ERA L LDGSC++ Sbjct: 194 VLDTDAFLPAVGQGAVAIESRVGDEATNGAIAAIACRATGIALAAERALLTALDGSCRTP 253 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307 I G A +G + G++L+ DG+ E DA +G D +R + Sbjct: 254 IGGLATVEGDMVRLRGLILSPDGRDAAEADETAPVSDAARLGADMGARLRATAPARALGL 313 >gi|242060648|ref|XP_002451613.1| hypothetical protein SORBIDRAFT_04g004630 [Sorghum bicolor] gi|241931444|gb|EES04589.1| hypothetical protein SORBIDRAFT_04g004630 [Sorghum bicolor] Length = 356 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 131/306 (42%), Positives = 183/306 (59%), Gaps = 5/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGL Sbjct: 48 IRIGTRGSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGL 107 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L Sbjct: 108 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPA 167 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+G++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RL + Sbjct: 168 GSVVGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLNMAE 227 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+ Sbjct: 228 NATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVACEREFLAVLDGN 287 Query: 244 CKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFIS 300 C++ IA +AY K F G++ + DG E +R+G D + +G+DA ++ + Sbjct: 288 CRTPIAAYAYRDKDGNCSFRGLLASPDGSKVFETTRSGPYSFDDMVELGKDAGHELKAKA 347 Query: 301 NKNVFN 306 F+ Sbjct: 348 GPGFFD 353 >gi|114566228|ref|YP_753382.1| hydroxymethylbilane synthase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122318683|sp|Q0AZ43|HEM3_SYNWW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|114337163|gb|ABI68011.1| hydroxymethylbilane synthase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 306 Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 123/291 (42%), Positives = 177/291 (60%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LAL A +SL++ IP + I + T GD+I + L++IG KGLFT Sbjct: 4 LRLGTRGSQLALWQARHV-ASLLE-SSIPDLKVEIKTIKTTGDKILDVALSKIGDKGLFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIEK+L+ GEID AVHS KD+P++L GL I+A L RED RDV +SH SL DL + Sbjct: 62 KEIEKELLDGEIDIAVHSMKDLPSELPPGLCIAAVLEREDPRDVLLSHKNYSLADLPQAA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +IGTSSLRR A L WR D+ ++D RG +ETR+ K+ I+LA AG+KRL E++I Sbjct: 122 LIGTSSLRRIAQLKAWRPDLQLVDMRGNVETRIRKMKEQDLDGIILACAGVKRLGLEEMI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L P+ GQG I +E + +L+ INH+D++ + ER FL EL G C+ Sbjct: 182 SDYLPAHLVLPAVGQGMIAVEARSDEQDVLKLLSRINHQDSFLAGQAERGFLHELGGGCQ 241 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +A A +G L+ G++ + DGK + S + + +A GR+ A+ + Sbjct: 242 VPVASLAELQGGQLHIRGLIASLDGKEKYSGSSDCSPPEAEEAGRELARSL 292 >gi|226509736|ref|NP_001150986.1| LOC100284619 [Zea mays] gi|195643410|gb|ACG41173.1| porphobilinogen deaminase [Zea mays] Length = 356 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 130/306 (42%), Positives = 181/306 (59%), Gaps = 5/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGL Sbjct: 48 IRIGTRGSPLALAQAHETREKLKATHSELAEERAIEIVIIKTTGDMILDKPLADIGGKGL 107 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L Sbjct: 108 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPA 167 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SVIG++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RL + Sbjct: 168 GSVIGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLNMAE 227 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+ Sbjct: 228 NATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSALNHEDTRLAVACEREFLAVLDGN 287 Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFIS 300 C++ IA +AY F G++ + G E +R+G D + +G+DA ++ + Sbjct: 288 CRTPIAAYAYRDNDGNCSFRGLLASPGGSKVFETTRSGPYSFDDMVEMGKDAGHELKAKA 347 Query: 301 NKNVFN 306 F+ Sbjct: 348 GPGFFD 353 >gi|163854244|ref|YP_001642287.1| porphobilinogen deaminase [Methylobacterium extorquens PA1] gi|163665849|gb|ABY33216.1| porphobilinogen deaminase [Methylobacterium extorquens PA1] Length = 309 Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 121/303 (39%), Positives = 173/303 (57%), Gaps = 3/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIGTR SP+ALA R ++ + P I+ +ST DR+ +R L+EIGGKGL Sbjct: 5 RALRIGTRGSPMALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDLA 122 FT+E+E+ L + EID AVHS KD+ T L GL I+ L R+D RD F+S + A L DL Sbjct: 63 FTKELEQALFADEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADLP 122 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR A +L R D++++ RG TR+ KL + A LLA AG++RL Sbjct: 123 PGARVGTSSLRRGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGMA 182 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V + +L++E+ P+ QGA+ IE + + L+ + T +++ ER LAELDG Sbjct: 183 DVARSVLSVEEMLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELDG 242 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC++ IA A KG + G++ DG V R G DA IGRDA ++ + Sbjct: 243 SCRTPIAALAQVKGDRISLDGLLFLPDGSRHWAVHREGLAADADTIGRDAGAELKRAAGD 302 Query: 303 NVF 305 F Sbjct: 303 VYF 305 >gi|114770079|ref|ZP_01447617.1| porphobilinogen deaminase [alpha proteobacterium HTCC2255] gi|114548916|gb|EAU51799.1| porphobilinogen deaminase [alpha proteobacterium HTCC2255] Length = 307 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 117/266 (43%), Positives = 160/266 (60%), Gaps = 1/266 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P IGTR SPLALA A ET L+ + I + T GD+I +R L+E+GGKGLF Sbjct: 8 PLVIGTRGSPLALAQAHETMGRLIRSTGLDESCFKITVIKTSGDKIQDRPLSEVGGKGLF 67 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+EIE ++ ID AVHS KDMP +GL++S YLPRED+RD FIS +++ +L Sbjct: 68 TKEIEDAMLDYGIDIAVHSMKDMPVICPEGLKLSCYLPREDVRDSFISTKYKNINELPKG 127 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A LL R D+ +++FRG ++TRL KLN A A LA AG+ RL + ++ Sbjct: 128 ATVGTSSLRRRAQLLNKRPDLKIVEFRGNVQTRLRKLNEGVAEATFLACAGLNRLGRNEI 187 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I +D P+ QG I IE + + E++ IN + + ER LAELDGSC Sbjct: 188 SNPI-EPDDMLPAIAQGCIGIEQREGDTEIAEILTKINDKSASLRLAAERTLLAELDGSC 246 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG 270 ++ IAG A G + G V+ DG Sbjct: 247 QTPIAGLAELDGQKMRLRGEVIRPDG 272 >gi|255070965|ref|XP_002507564.1| hydroxymethylbilane synthase [Micromonas sp. RCC299] gi|226522839|gb|ACO68822.1| hydroxymethylbilane synthase [Micromonas sp. RCC299] Length = 353 Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 123/298 (41%), Positives = 176/298 (59%), Gaps = 8/298 (2%) Query: 6 FRIGTRCSPLALAHAFETR----SSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +IGTR SPLALA A+ TR +S ++ I II T GD++ ++ L +IGGK Sbjct: 40 IKIGTRGSPLALAQAYMTRDLLKASFPELGNDGALEICII--KTTGDKVLDQPLADIGGK 97 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT E++ L+ G ID AVHS KD+PT L +G + LPRED+RD FIS L +L Sbjct: 98 GLFTRELDVALLDGRIDIAVHSMKDVPTYLPEGTILPCMLPREDVRDAFISVKYDDLSEL 157 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 S++GT+SLRR++ LL + ++FRG +++R+ KL LLA AG+ R+ Sbjct: 158 PEGSLVGTASLRRQSQLLARFPGLKCVNFRGNVQSRIRKLQEGVVDCTLLAIAGLNRMDM 217 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + +IL+++ P+ QGAI I + K ++ +NHE+T +V CER+FLA LD Sbjct: 218 TQHATKILDVDVMLPAVAQGAIGIACRTGDSKQITYLESLNHEETRIAVECERSFLAALD 277 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR--NGNRCDAINIGRDAAQYIR 297 GSC++ IAGFA G L F G+V A DG E SR + DAI G++A ++ Sbjct: 278 GSCRTPIAGFARKDGDNLRFNGLVAALDGSEILETSRVTKWSYADAIAAGKEAGAELK 335 >gi|83313519|ref|YP_423783.1| porphobilinogen deaminase [Magnetospirillum magneticum AMB-1] gi|82948360|dbj|BAE53224.1| Porphobilinogen deaminase [Magnetospirillum magneticum AMB-1] Length = 262 Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 106/258 (41%), Positives = 160/258 (62%) Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109 + +R L EIGGKGLFT+E+++ ++SG I AVHS KD+PT+L G+ + LPRED+RD Sbjct: 1 MQDRPLAEIGGKGLFTKELDEAMLSGRIHLAVHSMKDVPTQLPDGIVLPCILPREDVRDA 60 Query: 110 FISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAI 169 F+S SL +L +V+GTSSLRR A +L R D+ V++FRG ++TRL KL A Sbjct: 61 FLSLKVGSLAELPQGAVVGTSSLRRGAQILHRRPDLKVVNFRGNVQTRLRKLEEGVVDAT 120 Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 +LA AG++RL + L+ +D P+ QGAI I ++ + + + +N D++ Sbjct: 121 MLAMAGLRRLGLAQHATSALSEDDMLPAVAQGAIGITCRADDQASLDYLAALNCPDSFVR 180 Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 V ERAFL LDGSC++ IA A G L F G++++ DG H +R+G+R DA +G Sbjct: 181 VAAERAFLTRLDGSCRTPIAALAELDGDRLSFRGLIVSPDGTTVHATARSGSRADAEAMG 240 Query: 290 RDAAQYIRFISNKNVFNF 307 +DAA+ + ++ F+ Sbjct: 241 KDAAEELIKVAGPGFFDL 258 >gi|188584576|ref|YP_001928021.1| porphobilinogen deaminase [Methylobacterium populi BJ001] gi|179348074|gb|ACB83486.1| porphobilinogen deaminase [Methylobacterium populi BJ001] Length = 309 Score = 215 bits (547), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 121/304 (39%), Positives = 171/304 (56%), Gaps = 3/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +P RIGTR SP+ALA R ++ + P I+ +ST DR+ +R L+EIGGKG Sbjct: 4 SRPLRIGTRGSPMALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIGGKG 61 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH-TAQSLKDL 121 LFT+E+E+ L + ID AVHS KD+ T L GL I+ L R+D RD F+S TA L DL Sbjct: 62 LFTKELEQALFADTIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSAGTANGLADL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSSLRR A +L R D+ ++ RG TR+ KL + A LLA AG++RL Sbjct: 122 PSGARVGTSSLRRGAQVLMHRPDLMIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGM 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E V + +L +E+ P+ QGA+ IE + + L+ + T +++ ER LAELD Sbjct: 182 EDVARSVLPVEEMLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELD 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC++ IA A G + G++ DG V R G +A IGRDA ++ + Sbjct: 242 GSCRTPIAALAQVNGDRIALDGLLFLPDGSRHWAVHREGPAAEADAIGRDAGAELKRSAG 301 Query: 302 KNVF 305 F Sbjct: 302 DVYF 305 >gi|83308731|emb|CAJ01641.1| porphobilinogen deaminase (ec 4.3.1.8) [Methylocapsa acidiphila] Length = 293 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 117/267 (43%), Positives = 161/267 (60%) Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74 +ALA A E R L +I I I+ + T GD I +R L+E GGKGLFT+E++ L+ Sbjct: 1 MALAQAHELRGRLAASSRIDGDAIEIVVIKTSGDVIQDRALSEAGGKGLFTKELDFALMR 60 Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRR 134 GE+D AVHSAKD+PT L + I+ YLPRED+RD +IS A +L +V+GT+SLRR Sbjct: 61 GEVDIAVHSAKDLPTSLPGEIAIAGYLPREDVRDAWISPKAAHPLELPAGAVVGTASLRR 120 Query: 135 KALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDF 194 A++ R R D+S++ RG +ETRL KL + A LLA AG+KRL E +L+ +F Sbjct: 121 GAMVKRLRPDLSIVLLRGNVETRLGKLAAGEVDATLLALAGLKRLGLEDRATAVLDAGEF 180 Query: 195 PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254 P+ GQGAI I + A + + + T ++ ERAFL LDGSCK+ I A Sbjct: 181 VPAAGQGAIAITLRAGDQAALDALAPVLDAATGAALAAERAFLHVLDGSCKTPIGAHARL 240 Query: 255 KGSTLYFYGIVLASDGKIFHEVSRNGN 281 G + F+G+VL DG F EV +G+ Sbjct: 241 AGDEINFHGVVLKPDGSQFFEVVLSGS 267 >gi|170738754|ref|YP_001767409.1| porphobilinogen deaminase [Methylobacterium sp. 4-46] gi|168193028|gb|ACA14975.1| porphobilinogen deaminase [Methylobacterium sp. 4-46] Length = 311 Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 116/305 (38%), Positives = 172/305 (56%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEI 58 M +P RIGTR SP+ALA R + H P + ++ ++T DRI +R L+ I Sbjct: 1 MAHRPLRIGTRGSPMALAQTGMVRDRIAAAHPHLAEPGAMELVVVNTVADRILDRPLSAI 60 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLFT+E+E+ L +GEID AVHS KD+ T L GL I+ L R+D RD F+S + SL Sbjct: 61 GGKGLFTKELEQALFAGEIDVAVHSMKDVETWLPDGLVIACILERDDPRDAFLSLASGSL 120 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L + +GTSSLRR A +L R D+ ++ RG TR+ KL A LLA AG++R Sbjct: 121 AELPAGARVGTSSLRRGAQVLMRRPDLRIVPLRGNANTRIRKLEEGVCDATLLAIAGLER 180 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + + ++ +E+ P+ QGA+ IE + L++ + T ++ ER LA Sbjct: 181 LGLAHLARTVIPVEEMLPAVAQGALGIECRAADEDVIALLQAVACPRTTTALAAERGLLA 240 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 ELDGSC++ IA A G L G++ DG +R+G +A +IGR+A ++ Sbjct: 241 ELDGSCRTPIAALAQIDGDRLTLDGLLFLPDGSAHWATTRSGPAAEAASIGREAGADLKA 300 Query: 299 ISNKN 303 + + Sbjct: 301 QAGET 305 >gi|109896672|ref|YP_659927.1| porphobilinogen deaminase [Pseudoalteromonas atlantica T6c] gi|123065108|sp|Q15Z15|HEM3_PSEA6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|109698953|gb|ABG38873.1| hydroxymethylbilane synthase [Pseudoalteromonas atlantica T6c] Length = 309 Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 113/296 (38%), Positives = 174/296 (58%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LA+ A ++ L++ H P + ++P+ST+GDRI + L +IGG Sbjct: 1 MSDRVIRIATRKSALAMWQAEYVQAKLLEAH--PQLKVELVPMSTQGDRILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E + G D AVHS KD+P G + RE+ D F+S+T S+++ Sbjct: 59 KGLFIKELEVAMSEGRADIAVHSMKDVPVDFPAGFGLHCICERENPYDAFVSNTYASIEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ + R D+++ D RG + TRL KL++ + AI+LA AG+ RL+ Sbjct: 119 LPQGAIVGTSSLRRQCQIRSARPDLTIRDLRGNVNTRLAKLDDGQYDAIILAAAGLIRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + IK + P+ GQGA+ IE ++ + EL+K +NH DT V ERA A+L Sbjct: 179 MQDRIKTYIEPTVSLPAVGQGAVGIECRNDDAELIELLKPLNHSDTESRVKAERAMNAKL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ I +A G LY G+V + DG + + + GN DA++IG D A+ + Sbjct: 239 NGGCQVPIGSYAVLNGDELYLRGLVGSPDGSVLLQAEKRGNVNDALSIGVDVAEQL 294 >gi|220921724|ref|YP_002497025.1| porphobilinogen deaminase [Methylobacterium nodulans ORS 2060] gi|219946330|gb|ACL56722.1| porphobilinogen deaminase [Methylobacterium nodulans ORS 2060] Length = 318 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 114/299 (38%), Positives = 173/299 (57%), Gaps = 2/299 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEI 58 M +P RIGTR SP+ALA R + H P + ++ ++T D++ +R L+ I Sbjct: 8 MVHRPLRIGTRGSPMALAQTGMVRDRIAAAHPHLAEPGAMELVVVNTVADKVLDRPLSAI 67 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLFT+E+E+ L +GEID AVHS KD+ T L GL I++ L R+D RD F+S A+SL Sbjct: 68 GGKGLFTKELEQALFAGEIDLAVHSMKDVETWLPDGLVIASILERDDPRDAFLSLKARSL 127 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L S +GTSSLRR A +L R D+ ++ RG TR+ +L A LLA AG++R Sbjct: 128 AELPAGSRVGTSSLRRGAQVLMRRPDLQIVPLRGNANTRIRRLEEGACDATLLAIAGLER 187 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + +E++ + P+ QGA+ IE + + +L++ + T ++ ER LA Sbjct: 188 LGLAHLAQEVMGTDTMLPAVAQGALGIECRAADQELIDLLQAVACPRTTTALAAERGLLA 247 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 ELDGSC++ IA A +G L G++ DG +R+G +A IG++A ++ Sbjct: 248 ELDGSCRTPIAALAEIEGDRLTLNGLLFLPDGSAHWATTRSGPAAEAAAIGKEAGADLK 306 >gi|297617596|ref|YP_003702755.1| porphobilinogen deaminase [Syntrophothermus lipocalidus DSM 12680] gi|297145433|gb|ADI02190.1| porphobilinogen deaminase [Syntrophothermus lipocalidus DSM 12680] Length = 316 Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 120/300 (40%), Positives = 173/300 (57%), Gaps = 2/300 (0%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 RIGTR S LAL A L D P H I + TKGD+IT+ L++IG KGLFT+ Sbjct: 12 RIGTRGSRLALWQANYVVKRLRDC--FPGHEFEITVIKTKGDKITDVALSKIGDKGLFTK 69 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE L+ EID AVHS KD+PT L +G++++A L RE+ DV +S SL L + Sbjct: 70 EIEMALLREEIDIAVHSLKDLPTTLPEGIRLAAVLERENPLDVLLSFKGYSLSGLPRGAR 129 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGTSSLRR A L R R DI ++ RG +ETR+ K+ + I+LAYAG+KR+ ++ Sbjct: 130 IGTSSLRRTAQLKRLRPDIETVNLRGNVETRIRKMEDEGLDGIVLAYAGVKRMGFLHLVT 189 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 EIL+ + P+ GQG I +E + A+ELVK +NH+ TW + ERAFL ++G C+ Sbjct: 190 EILHPDQVIPAVGQGVIALEIKEDGKVAEELVKPLNHQPTWAEITAERAFLKAIEGGCQV 249 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 A + L G+V + DG++ + +G+ A +G + A+ I + ++ Sbjct: 250 PCGCHASYQEGYLTVDGLVASLDGQVVYRDRVSGSEAFAQQLGEELARRILAMGGGSLLE 309 >gi|256821394|ref|YP_003145357.1| porphobilinogen deaminase [Kangiella koreensis DSM 16069] gi|256794933|gb|ACV25589.1| porphobilinogen deaminase [Kangiella koreensis DSM 16069] Length = 311 Score = 211 bits (538), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 117/306 (38%), Positives = 170/306 (55%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLA+ A +S L +H P + ++P++T+GD+I LT+IGG Sbjct: 1 MSISTLRIATRQSPLAMWQAEYVQSRLQQLH--PDLTVELVPMTTQGDKILGTPLTKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P + +GL++ RED D F+S+ +L D Sbjct: 59 KGLFVKELEQAMLEGRADIAVHSMKDVPYQFPEGLELKVICEREDPTDAFVSNKYHNLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRRK LLR R D+ + D RG + TRL+KL++ AI+LA AG+KRL Sbjct: 119 LPCGANVGTSSLRRKIQLLRARPDLKITDLRGNVGTRLSKLDDGNYDAIVLASAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ E P+PGQGA+ IE N+P +++ + E T V ER L Sbjct: 179 LEERIRSQFEPELMLPAPGQGAVGIEARTNDPDLDAILQPLQDETTSLRVLAERTITKTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 SC+ +A FA TL +V D +I E S G DA+ IG +Q + + Sbjct: 239 QASCQVPVAAFATINDDTLSLRALVGGVDQQII-EASAEGPAQDALAIGHKVSQELLELG 297 Query: 301 NKNVFN 306 + + Sbjct: 298 ARELIQ 303 >gi|308051395|ref|YP_003914961.1| porphobilinogen deaminase [Ferrimonas balearica DSM 9799] gi|307633585|gb|ADN77887.1| porphobilinogen deaminase [Ferrimonas balearica DSM 9799] Length = 310 Score = 211 bits (538), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 116/296 (39%), Positives = 175/296 (59%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K RI TR SPLAL A ++ L H P + ++ +STKGDRI + L ++GG Sbjct: 1 MARKEIRIATRKSPLALWQAEFVKAELEKAH--PGLTVTLLKMSTKGDRILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E +++GE D AVHS KD+P + +GL ++ RED RD F+S+T ++L D Sbjct: 59 KGLFVKELEVAMLNGEADIAVHSMKDVPVEFPEGLGLAVICDREDPRDAFVSNTYKNLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++G+SSLRR+ L R D+ V D RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 119 LPHGAIVGSSSLRRQCQLRAMRPDLDVRDLRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I + E P+ GQGA+ IE +++ + L+ V+NH T V ERA L Sbjct: 179 LEERITAFIEPEQSLPANGQGAVGIECRLDDAELLALIGVLNHAPTHARVIAERAMNTHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ I ++ +G TL+ G+V DG + G DA +G + A+ + Sbjct: 239 EGGCQVPIGAYSVIEGDTLWLRGLVGDPDGSKIIQDELRGPVADAQKLGIELAERL 294 >gi|193215989|ref|YP_001997188.1| porphobilinogen deaminase [Chloroherpeton thalassium ATCC 35110] gi|238058923|sp|B3QWI1|HEM3_CHLT3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|193089466|gb|ACF14741.1| porphobilinogen deaminase [Chloroherpeton thalassium ATCC 35110] Length = 314 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 116/269 (43%), Positives = 164/269 (60%), Gaps = 2/269 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK IGTR SPLAL A ++ L + P +I + + T GD+I + L +IG KG Sbjct: 2 KKALIIGTRSSPLALWQAEFIKAELSKHY--PSLDISLRHIKTTGDKILDAPLAKIGDKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT EIE ++ EID AVHS KD+PT+ +GL I+A RED RDV IS +LK L Sbjct: 60 LFTREIEHVMLRNEIDLAVHSLKDLPTETPEGLVITAITEREDNRDVLISKGKYTLKTLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++ TSSLRR++ LL R D+ VID RG + TR + A A+LLA+AG+ RL+ Sbjct: 120 QGAIVATSSLRRRSQLLHLRPDLEVIDMRGNLNTRFKRFEEGDAEAMLLAFAGVHRLEFS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I EI++ +D P+ GQGA+ IET +++ + +EL+KV+NH +T CER+ L L+G Sbjct: 180 EHIAEIISFDDILPAVGQGALGIETRIDDEETRELLKVLNHAETELCTKCERSLLRTLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 C+ I A + T +F V + DGK Sbjct: 240 GCQIPIGAHARIENGTFHFATYVGSIDGK 268 >gi|297581838|ref|ZP_06943759.1| porphobilinogen deaminase [Vibrio cholerae RC385] gi|297533932|gb|EFH72772.1| porphobilinogen deaminase [Vibrio cholerae RC385] Length = 317 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 115/306 (37%), Positives = 170/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L RSD+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARSDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G+T++ +V DG G R A +G A+ + Sbjct: 245 QGGCQVPIGSYALLEGNTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304 Query: 301 NKNVFN 306 K + Sbjct: 305 AKEILE 310 >gi|325918388|ref|ZP_08180519.1| hydroxymethylbilane synthase [Xanthomonas vesicatoria ATCC 35937] gi|325535411|gb|EGD07276.1| hydroxymethylbilane synthase [Xanthomonas vesicatoria ATCC 35937] Length = 304 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 119/292 (40%), Positives = 171/292 (58%), Gaps = 4/292 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 4 LRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ SL+ L L + Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDDPFVLPAILGRGDAADALVSNLYASLQALPLGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL + I Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLDARI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ D+ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC Sbjct: 182 SARLDAPDWLPAPAQGAVAVECRGDDARIHALLAVLDAPTTRVCVEAERAMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +A FA +G LY G+V ASDG++ H +G+ D +GR AQ + Sbjct: 242 VPVAAFATWEGEGLYLQGMVGSASDGRLIH-ADAHGSAGDTEELGRRVAQGL 292 >gi|308188851|ref|YP_003932982.1| Porphobilinogen deaminase [Pantoea vagans C9-1] gi|308059361|gb|ADO11533.1| Porphobilinogen deaminase [Pantoea vagans C9-1] Length = 317 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 115/289 (39%), Positives = 164/289 (56%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K FRI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG Sbjct: 5 MLDKIFRIATRQSPLALWQAHYVQQRLMSAH--PGLRVELVPMVTKGDIILDTPLAKVGG 62 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E + G D AVHS KD+P +GL + R+D RD F+SH S+ Sbjct: 63 KGLFVKELELAMQDGRADMAVHSMKDVPVSFPEGLGLVTICERDDPRDAFVSHHYDSIDA 122 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 123 LPQGAVVGTSSLRRQCQISARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 182 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I++ + E P+ GQGA+ IE +N+ +L++ +NH+DT V ERA L Sbjct: 183 MQDRIRQAMPAEVSLPAVGQGAVGIECRLNDSVLIDLLRALNHDDTEVCVRAERAMNTRL 242 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I FA +G L+ G+V A DG++ R G R A +G Sbjct: 243 EGGCQVPIGSFAVLEGDELWLRGMVGAPDGRVMVSGERRGPRAQAEQMG 291 >gi|153214841|ref|ZP_01949649.1| porphobilinogen deaminase [Vibrio cholerae 1587] gi|153830620|ref|ZP_01983287.1| porphobilinogen deaminase [Vibrio cholerae 623-39] gi|124115084|gb|EAY33904.1| porphobilinogen deaminase [Vibrio cholerae 1587] gi|148873892|gb|EDL72027.1| porphobilinogen deaminase [Vibrio cholerae 623-39] Length = 311 Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 114/306 (37%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G+T++ +V DG G R A +G A+ + Sbjct: 239 QGGCQVPIGSYALLEGNTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|229525016|ref|ZP_04414421.1| porphobilinogen deaminase [Vibrio cholerae bv. albensis VL426] gi|229338597|gb|EEO03614.1| porphobilinogen deaminase [Vibrio cholerae bv. albensis VL426] Length = 317 Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 114/306 (37%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G+T++ +V DG G R A +G A+ + Sbjct: 245 QGGCQVPIGSYALLEGNTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304 Query: 301 NKNVFN 306 K + Sbjct: 305 AKEILE 310 >gi|255743926|ref|ZP_05417881.1| porphobilinogen deaminase [Vibrio cholera CIRS 101] gi|262151165|ref|ZP_06028304.1| porphobilinogen deaminase [Vibrio cholerae INDRE 91/1] gi|262167035|ref|ZP_06034752.1| porphobilinogen deaminase [Vibrio cholerae RC27] gi|262189994|ref|ZP_06048299.1| porphobilinogen deaminase [Vibrio cholerae CT 5369-93] gi|11386839|sp|Q9KVM1|HEM3_VIBCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|255738409|gb|EET93799.1| porphobilinogen deaminase [Vibrio cholera CIRS 101] gi|262024553|gb|EEY43237.1| porphobilinogen deaminase [Vibrio cholerae RC27] gi|262031059|gb|EEY49684.1| porphobilinogen deaminase [Vibrio cholerae INDRE 91/1] gi|262034117|gb|EEY52552.1| porphobilinogen deaminase [Vibrio cholerae CT 5369-93] Length = 311 Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 114/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G T++ +V DG G R A +G A+ + Sbjct: 239 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|283780135|ref|YP_003370890.1| porphobilinogen deaminase [Pirellula staleyi DSM 6068] gi|283438588|gb|ADB17030.1| porphobilinogen deaminase [Pirellula staleyi DSM 6068] Length = 311 Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 115/298 (38%), Positives = 174/298 (58%), Gaps = 5/298 (1%) Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M P R+GTR SPLA A R L+ ++ +I ++T+GD+ T++ L +IG Sbjct: 1 MSDAPKLRLGTRASPLARWQADWVRDQLIAAGI----DVEMILITTEGDQQTSQPLGQIG 56 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G+GLFT+EI+++L++G+ID AVHS KD+PT + GL ++A RED D+ I SL Sbjct: 57 GQGLFTKEIQRRLLAGDIDLAVHSLKDLPTLPIDGLSLAAVPEREDTADILIGPAGTSLA 116 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + IGT SLRRKA LL R+D+ ++D RG ++TRL KL+ + HAI+LA AG+KRL Sbjct: 117 TLPSGAKIGTGSLRRKAQLLHARADLEILDIRGNVDTRLRKLDEGQYHAIILAAAGLKRL 176 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 K + + E L P+ GQGA+ IE+ ++P ++L+ ++H T +V ER+ LA Sbjct: 177 KLDDRMTERLEAPLMLPAVGQGALGIESRSDDPTTRKLLAPLSHAPTLQAVIAERSLLAA 236 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L C + + A L +VL+ DG+ S DA +G + A+ +R Sbjct: 237 LRAGCLAPVGAHAQVVDGQLTLAAVVLSIDGQSRLFASLTSAPADAAQLGEEVAELLR 294 >gi|294666828|ref|ZP_06732061.1| porphobilinogen deaminase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603412|gb|EFF46830.1| porphobilinogen deaminase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 304 Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 118/292 (40%), Positives = 173/292 (59%), Gaps = 4/292 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 4 LRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ GE DCAVHS KD+P +L + + A L R D D +S+ SL+ L L + Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDEPFVLPAILERGDPADGLVSNLYASLQALPLGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E I Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEARI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ ++ P+P QGA+ +E ++ + L+ V++ + T V ERA L GSC Sbjct: 182 SARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDADRTRACVEAERAMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +A FA +G L+ G+V ASDG++ H +G+ D +GR AQ + Sbjct: 242 VPVAAFARWEGQDLFLQGMVGSASDGRLIH-ADAHGSADDTEALGRRVAQGL 292 >gi|304398148|ref|ZP_07380023.1| porphobilinogen deaminase [Pantoea sp. aB] gi|304354434|gb|EFM18806.1| porphobilinogen deaminase [Pantoea sp. aB] Length = 317 Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 114/289 (39%), Positives = 165/289 (57%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K FRI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG Sbjct: 5 MLDKIFRIATRQSPLALWQAHYVQQRLMSAH--PGLRVELVPMVTKGDIILDTPLAKVGG 62 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E + G D AVHS KD+P +GL + R+D RD F+SH S+ Sbjct: 63 KGLFVKELELAMQDGRADMAVHSMKDVPVSFPEGLGLVTICERDDPRDAFVSHHYDSIDA 122 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ + R D+ + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 123 LPQGAIVGTSSLRRQCQISARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 182 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ + E P+ GQGA+ IE +++ +L++ +NH+DT V ERA L Sbjct: 183 LEDRIRQAMPAEVSLPAVGQGAVGIECRLDDSVLIDLLRALNHDDTEVCVRAERAMNTRL 242 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I FA +G+ L+ G+V A DG++ R G R A +G Sbjct: 243 EGGCQVPIGSFAVLEGNDLWLRGMVGAPDGRVMVSGERRGPRAQAEQMG 291 >gi|254291929|ref|ZP_04962710.1| porphobilinogen deaminase [Vibrio cholerae AM-19226] gi|150422139|gb|EDN14105.1| porphobilinogen deaminase [Vibrio cholerae AM-19226] Length = 311 Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 114/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G T++ +V DG G R A +G A+ + Sbjct: 239 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSKIVRGEIRGPRTQAEQLGITLAEQLLSQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|294625631|ref|ZP_06704254.1| porphobilinogen deaminase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600054|gb|EFF44168.1| porphobilinogen deaminase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 304 Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 118/292 (40%), Positives = 172/292 (58%), Gaps = 4/292 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 4 LRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ GE DCAVHS KD+P +L + + A L R D D +S+ SL+ L L + Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDEPFVLPAILERGDPADALVSNLYASLQALPLGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E I Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEARI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC Sbjct: 182 SARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +A FA +G L+ G+V ASDG++ H +G+ D +GR AQ + Sbjct: 242 VPVAAFARWEGQDLFLQGMVGSASDGRLIH-ADAHGSADDTEALGRRVAQGL 292 >gi|15640152|ref|NP_229779.1| porphobilinogen deaminase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587718|ref|ZP_01677479.1| porphobilinogen deaminase [Vibrio cholerae 2740-80] gi|121728303|ref|ZP_01681334.1| porphobilinogen deaminase [Vibrio cholerae V52] gi|147675270|ref|YP_001218298.1| porphobilinogen deaminase [Vibrio cholerae O395] gi|153818935|ref|ZP_01971602.1| porphobilinogen deaminase [Vibrio cholerae NCTC 8457] gi|153822325|ref|ZP_01974992.1| porphobilinogen deaminase [Vibrio cholerae B33] gi|227080356|ref|YP_002808907.1| porphobilinogen deaminase [Vibrio cholerae M66-2] gi|229508398|ref|ZP_04397902.1| porphobilinogen deaminase [Vibrio cholerae BX 330286] gi|229508921|ref|ZP_04398411.1| porphobilinogen deaminase [Vibrio cholerae B33] gi|229517035|ref|ZP_04406481.1| porphobilinogen deaminase [Vibrio cholerae RC9] gi|229606671|ref|YP_002877319.1| porphobilinogen deaminase [Vibrio cholerae MJ-1236] gi|254851504|ref|ZP_05240854.1| porphobilinogen deaminase [Vibrio cholerae MO10] gi|298501111|ref|ZP_07010911.1| porphobilinogen deaminase [Vibrio cholerae MAK 757] gi|9654520|gb|AAF93298.1| porphobilinogen deaminase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548017|gb|EAX58095.1| porphobilinogen deaminase [Vibrio cholerae 2740-80] gi|121629433|gb|EAX61862.1| porphobilinogen deaminase [Vibrio cholerae V52] gi|126510497|gb|EAZ73091.1| porphobilinogen deaminase [Vibrio cholerae NCTC 8457] gi|126520151|gb|EAZ77374.1| porphobilinogen deaminase [Vibrio cholerae B33] gi|146317153|gb|ABQ21692.1| porphobilinogen deaminase [Vibrio cholerae O395] gi|227008244|gb|ACP04456.1| porphobilinogen deaminase [Vibrio cholerae M66-2] gi|227011878|gb|ACP08088.1| porphobilinogen deaminase [Vibrio cholerae O395] gi|229346098|gb|EEO11070.1| porphobilinogen deaminase [Vibrio cholerae RC9] gi|229354038|gb|EEO18971.1| porphobilinogen deaminase [Vibrio cholerae B33] gi|229354671|gb|EEO19593.1| porphobilinogen deaminase [Vibrio cholerae BX 330286] gi|229369326|gb|ACQ59749.1| porphobilinogen deaminase [Vibrio cholerae MJ-1236] gi|254847209|gb|EET25623.1| porphobilinogen deaminase [Vibrio cholerae MO10] gi|297540145|gb|EFH76206.1| porphobilinogen deaminase [Vibrio cholerae MAK 757] Length = 317 Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 114/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G T++ +V DG G R A +G A+ + Sbjct: 245 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304 Query: 301 NKNVFN 306 K + Sbjct: 305 AKEILE 310 >gi|102139875|gb|ABF70028.1| porphobilinogen deaminase, chloroplast (hydroxymethylbilane synthase) (pre-uroporphyrinogen synthase), putative [Musa acuminata] Length = 426 Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 126/301 (41%), Positives = 179/301 (59%), Gaps = 5/301 (1%) Query: 11 RCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 R SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGLFT+EI Sbjct: 123 RDSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGLFTKEI 182 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128 + L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L SV+G Sbjct: 183 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPAGSVVG 242 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188 ++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RL + + Sbjct: 243 SASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLNMAENATAV 302 Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248 L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+C++ I Sbjct: 303 LSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVACEREFLAVLDGNCRTPI 362 Query: 249 AGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFISNKNVF 305 A +AY + F G++ + DG E +R+G D + +G+DA ++ + F Sbjct: 363 AAYAYRDEDGNCSFRGLLASPDGSKVFETTRSGPYSFDDMVELGKDAGHELKAKAGPGFF 422 Query: 306 N 306 + Sbjct: 423 D 423 >gi|260914569|ref|ZP_05921037.1| hydroxymethylbilane synthase [Pasteurella dagmatis ATCC 43325] gi|260631360|gb|EEX49543.1| hydroxymethylbilane synthase [Pasteurella dagmatis ATCC 43325] Length = 311 Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 116/305 (38%), Positives = 172/305 (56%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +I TR SPLAL A + L + P N+V++P+ TKGD I + L +IGG Sbjct: 1 MTNNTLKIATRQSPLALWQANYVKQRLESFY--PDLNVVLVPMVTKGDVILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+SGE D AVHS KD+P + +GL +S PRED D +S+T ++L++ Sbjct: 59 KGLFVKELEIALLSGEADIAVHSMKDVPMQFPEGLGLSVICPREDPHDALVSNTYRTLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L + R D+ + RG + TRL+KL+ AI+LA AG+ RL Sbjct: 119 LPQGAIVGTSSLRRQCQLKQLRPDLKIESLRGNVGTRLSKLDCGDYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++I+D P+ GQGA+ IE N+ + Q+L+ + +T D V ERA L Sbjct: 179 LTERIASFIDIQDMLPAAGQGAVGIECRKNDSRVQQLLAPLADIETTDCVLAERAMNTHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + +Y G+V A DG +A N+G A+ + Sbjct: 239 QGGCQVPIAGYAIIENDQIYLRGLVGALDGSAILRAEAKSAVKNAENLGIQVAEMLLQQG 298 Query: 301 NKNVF 305 N+ Sbjct: 299 AGNIL 303 >gi|167625822|ref|YP_001676116.1| porphobilinogen deaminase [Shewanella halifaxensis HAW-EB4] gi|189028156|sp|B0TJ54|HEM3_SHEHH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|167355844|gb|ABZ78457.1| porphobilinogen deaminase [Shewanella halifaxensis HAW-EB4] Length = 310 Score = 208 bits (530), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 113/306 (36%), Positives = 175/306 (57%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H+ + ++P+STKGD I + L ++GG Sbjct: 1 MSQNLIRIATRKSPLAMWQAEFVKAELEKIHE--GLTVELLPMSTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G+ D AVHS KD+P + +GL + RED RD F+S+T ++++D Sbjct: 59 KGLFVKELEVAMLEGKADIAVHSMKDVPVEFPEGLGLEVICEREDPRDAFVSNTYKTIED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK Sbjct: 119 LPQGAVVGTSSLRRQCQIRAARPDLVIKDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I ++ E P+ GQGA+ IE ++ + + L+ + H +T V ERA L Sbjct: 179 LEERIASFISAEQSLPANGQGAVGIECRTDDARVKALLAPLEHAETRMRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G TL G+V DG + +GN+ DA +G A+ + Sbjct: 239 EGGCQVPIGAYAEIDGDTLSLRGLVGNPDGSQIITAASSGNKADAEKLGVALAEELLAKG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKTILD 304 >gi|325927040|ref|ZP_08188311.1| hydroxymethylbilane synthase [Xanthomonas perforans 91-118] gi|325542591|gb|EGD14062.1| hydroxymethylbilane synthase [Xanthomonas perforans 91-118] Length = 304 Score = 208 bits (530), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 118/292 (40%), Positives = 171/292 (58%), Gaps = 4/292 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 4 LRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ SL+ L L + Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYASLQALPLGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E I Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEARI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC Sbjct: 182 SARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +A FA +G L+ G+V ASDG++ H +G+ D +GR AQ + Sbjct: 242 VPVAAFARWEGQGLFLQGMVGSASDGRLIH-ADAHGSAEDTEALGRRVAQGL 292 >gi|288818572|ref|YP_003432920.1| porphobilinogen deaminase [Hydrogenobacter thermophilus TK-6] gi|288787972|dbj|BAI69719.1| porphobilinogen deaminase [Hydrogenobacter thermophilus TK-6] gi|308752163|gb|ADO45646.1| porphobilinogen deaminase [Hydrogenobacter thermophilus TK-6] Length = 304 Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 116/288 (40%), Positives = 172/288 (59%), Gaps = 6/288 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + L + H + ++ ++T GD+I + L +IGGKGLF Sbjct: 3 LRIGTRKSKLALWQANFVKEKLEKMG----HQVDLVHITTSGDKILDVPLAKIGGKGLFV 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ EID AVHS KD+P L +GL+I A RE+ DV IS L++L ++ Sbjct: 59 KEIEEALMKKEIDLAVHSLKDVPMNLPEGLKIGAVTERENPFDVLISKDHLPLEELPSNA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+ + R R D+ V RG ++TR+ KL+ HA++LAYAG+KR+ E I Sbjct: 119 KVGTSSLRRQVQIKRRRGDLRVEMLRGNVDTRIRKLDEGLYHAVILAYAGVKRMGLEDRI 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++L EDF P+ GQG++ IE ++ +E+V +H ++ CERAFL EL G C+ Sbjct: 179 TQVL--EDFIPAVGQGSLAIEIRQDDSAVEEIVSCFDHYESRLRAECERAFLRELQGGCQ 236 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 I +++ +G T++ G V +G F E R+G +A IG+ A Sbjct: 237 VPIGAYSWIEGDTIFIKGFVSDLEGIKFIEGMRSGEAKEAQQIGKSLA 284 >gi|148978777|ref|ZP_01815157.1| porphobilinogen deaminase [Vibrionales bacterium SWAT-3] gi|145962198|gb|EDK27482.1| porphobilinogen deaminase [Vibrionales bacterium SWAT-3] Length = 326 Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 110/285 (38%), Positives = 168/285 (58%), Gaps = 2/285 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++GGKGLF Sbjct: 20 PIRIATRKSPLALWQAYFVRDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGKGLF 77 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L Sbjct: 78 VKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQG 137 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GT SLRR+ LL +R D+ + + RG + TRL KL++ + AI+LA AG+KRL+ E+ Sbjct: 138 AVVGTCSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRLELEER 197 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+G C Sbjct: 198 IRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHQDTADRVLCERAMNLTLEGGC 257 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 + I ++ G ++ +V DG +G R DA +G Sbjct: 258 QVPIGSYSLLDGDNIWLRALVGEPDGSKMVRGEISGPRKDAEALG 302 >gi|322834934|ref|YP_004214961.1| porphobilinogen deaminase [Rahnella sp. Y9602] gi|321170135|gb|ADW75834.1| porphobilinogen deaminase [Rahnella sp. Y9602] Length = 313 Score = 208 bits (529), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 118/296 (39%), Positives = 169/296 (57%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A +S LM H P + ++P+ TKGD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAQYVQSRLMACH--PGLQVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ SL D Sbjct: 59 KGLFVKELELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQYASLAD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L + R D+ + D RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPQGSIVGTSSLRRQCQLRQKRPDLMIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I L E+ P+ GQGA+ IE +++ ++L+ + H +T V ERA L Sbjct: 179 LENRITYALTPEECLPAVGQGAVGIECRLDDQTTRDLLAPLAHRETTLRVQAERAMNMRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ I +A +G L+ +V A DG R G +A +G D A+ + Sbjct: 239 EGGCQVPIGSYAELEGDELWLRALVGAPDGSQMVCGERRGPAANAHRMGVDLAEEL 294 >gi|167644091|ref|YP_001681754.1| porphobilinogen deaminase [Caulobacter sp. K31] gi|189042878|sp|B0T287|HEM3_CAUSK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|167346521|gb|ABZ69256.1| porphobilinogen deaminase [Caulobacter sp. K31] Length = 318 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 115/275 (41%), Positives = 162/275 (58%), Gaps = 6/275 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-----IIPLSTKGDRITNRTL 55 M ++P RIG R S L+LA + ++ + P + + +IP+ T GDRI +R L Sbjct: 1 MSRQPIRIGARGSKLSLAQSGLMQARIAAALGAGPGDDIDAFAQLIPIVTSGDRIQDRRL 60 Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115 EIGGKGLFT+EIE+ L+ G IDCA+HS KDMP +L GL ++A RED RD FISH A Sbjct: 61 MEIGGKGLFTKEIEEALLDGRIDCAIHSLKDMPAELPPGLVLAAVPEREDPRDAFISHVA 120 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 + L+DL+ + +GT+SLRR+A L R D+ ++ RG ++TRL KL +A AILLA +G Sbjct: 121 ERLEDLSKGARLGTASLRRQAQALHVRPDLEIVMLRGNVDTRLAKLERGEADAILLAQSG 180 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + RL + L+ PP+PGQGA+ IET + L + + + T +V ER Sbjct: 181 LNRLGLGHITNSWLDPLAAPPAPGQGALVIETRAEDVDLPWL-QAVRCQATTLAVAAERG 239 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 L L+GSC++A+ A G L L DG Sbjct: 240 ALYALEGSCRTAVGAHARLDGLILTMIVEALTPDG 274 >gi|153803403|ref|ZP_01957989.1| porphobilinogen deaminase [Vibrio cholerae MZO-3] gi|124121060|gb|EAY39803.1| porphobilinogen deaminase [Vibrio cholerae MZO-3] Length = 311 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 113/306 (36%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G+T++ +V DG G R A +G A+ + Sbjct: 239 QGGCQVPIGSYALLEGNTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|182677009|ref|YP_001831155.1| porphobilinogen deaminase [Beijerinckia indica subsp. indica ATCC 9039] gi|182632892|gb|ACB93666.1| porphobilinogen deaminase [Beijerinckia indica subsp. indica ATCC 9039] Length = 337 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 126/275 (45%), Positives = 162/275 (58%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR SPLALA A E L H + I + T GD I +R L+ GGKGLFT Sbjct: 19 LRLGTRGSPLALAQAHELADRLARAHGFAKEAVAITIIRTSGDMIQDRPLSLAGGKGLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+++ LI G +D AVHSAKD+PT L + L I+ YLPRED+RDV+IS A +DL S Sbjct: 79 KELDQALIEGMVDLAVHSAKDLPTILPEDLIIAGYLPREDVRDVWISPKAGHPRDLPPGS 138 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GT+SLRR ALL R R D+ V RG +ETRL KL + A LLA AG++RL Sbjct: 139 VVGTASLRRGALLKRLRPDLEVRLLRGNVETRLAKLAAGEVDATLLALAGLRRLGLADKA 198 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++L IEDF P+ GQGAI I T ++ L+ I T ++ ER FL LDGSCK Sbjct: 199 TQVLAIEDFLPAAGQGAIGITTRRDDAATLALLAPILDPATHVALAAERGFLTVLDGSCK 258 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 + I A + + GIVL DG + E +G Sbjct: 259 TPIGAHATVEHDQVTLRGIVLRPDGSEWFEACESG 293 >gi|21241393|ref|NP_640975.1| porphobilinogen deaminase [Xanthomonas axonopodis pv. citri str. 306] gi|23821681|sp|Q8PPR3|HEM3_XANAC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|21106726|gb|AAM35511.1| porphobilinogen deaminase [Xanthomonas axonopodis pv. citri str. 306] Length = 304 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 118/292 (40%), Positives = 171/292 (58%), Gaps = 4/292 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL + +L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 4 LRIATRKSPLALWQSEHVADALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ GE DCAVHS KD+P +L + + A L R D D +S+ SL+ L L + Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDEPFVLPAILERGDPADALVSNLYASLQALPLGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E I Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEARI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC Sbjct: 182 SARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRVCVEAERAMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +A FA +G L+ G+V ASDG++ H +G+ D +GR AQ + Sbjct: 242 VPVAAFARWEGQDLFLQGMVGSASDGRLIH-ADAHGSADDTEALGRRVAQGL 292 >gi|229515846|ref|ZP_04405304.1| porphobilinogen deaminase [Vibrio cholerae TMA 21] gi|229527138|ref|ZP_04416532.1| porphobilinogen deaminase [Vibrio cholerae 12129(1)] gi|229335369|gb|EEO00852.1| porphobilinogen deaminase [Vibrio cholerae 12129(1)] gi|229347109|gb|EEO12070.1| porphobilinogen deaminase [Vibrio cholerae TMA 21] Length = 317 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 113/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G T++ +V DG G R A +G A+ + Sbjct: 245 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304 Query: 301 NKNVFN 306 K + Sbjct: 305 AKEILE 310 >gi|327483021|gb|AEA77428.1| Porphobilinogen deaminase [Vibrio cholerae LMA3894-4] Length = 311 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 113/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G T++ +V DG G R A +G A+ + Sbjct: 239 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|150387913|ref|YP_001317962.1| porphobilinogen deaminase [Alkaliphilus metalliredigens QYMF] gi|229836103|sp|A6TJD5|HEM3_ALKMQ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|149947775|gb|ABR46303.1| porphobilinogen deaminase [Alkaliphilus metalliredigens QYMF] Length = 316 Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 112/268 (41%), Positives = 162/268 (60%), Gaps = 2/268 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +IG+R S LAL A + L + K P + II ++T GDRI ++TL +IGGKGL Sbjct: 2 RTIKIGSRASQLALVQAEIIINMLKE--KFPQYTYEIIKITTLGDRILDKTLDKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+K L +ID A+HS KDMP + + L + A RED RDV I+ +SL++L Sbjct: 60 FVKEIQKALAEEKIDLAIHSMKDMPGETPEELVLGAITKREDPRDVLITRENKSLEELPK 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +VIG+SSLRR+A ++ R DI V+ RG + TRL K+ ++LA AG+ RL ++ Sbjct: 120 GAVIGSSSLRRQAQVMALRGDIKVVPIRGNVGTRLGKIETESLDGVILAAAGLNRLGLKE 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I L IEDF P+ GQGA+ E + + E++ INHE+T+ V ERAFL L+G Sbjct: 180 KISSYLEIEDFTPAVGQGALGCEARRKDIEMLEMLLAINHEETYRCVMAERAFLKLLEGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271 C I + +G L+ G+V +SDG+ Sbjct: 240 CHVPIGAYGQQQGQELHMTGMVASSDGR 267 >gi|163803631|ref|ZP_02197496.1| porphobilinogen deaminase [Vibrio sp. AND4] gi|159172579|gb|EDP57439.1| porphobilinogen deaminase [Vibrio sp. AND4] Length = 312 Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 109/288 (37%), Positives = 167/288 (57%), Gaps = 2/288 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QSTPIRIATRKSPLALWQAHFVKDALQSAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++ DL Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPIDFPDGLGLVTICEREDPRDAFVSNTYNNIDDL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ L +R D+ + + RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLEL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I+ + E P+ GQGA+ IE +++ + ++L++ +NH DT D V CERA L+ Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRIDDERLRKLLEPLNHRDTADRVRCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 G C+ I ++ G ++ +V DG + +G+R DA +G Sbjct: 241 GGCQVPIGSYSLLDGDNIWLRALVGEPDGSLIVRGEIHGHRNDAEALG 288 >gi|262172879|ref|ZP_06040557.1| porphobilinogen deaminase [Vibrio mimicus MB-451] gi|261893955|gb|EEY39941.1| porphobilinogen deaminase [Vibrio mimicus MB-451] Length = 311 Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 114/306 (37%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLKVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P KGL + RED RD F+S+T + D Sbjct: 59 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPKGLGLVTICEREDPRDAFVSNTYAKIDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL Sbjct: 119 LPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L Sbjct: 179 LESRIRNFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A G ++ +V DG G R +A +G A+ + Sbjct: 239 QGGCQVPIGSYALLDGDEIWLRALVGEPDGSQIVRGEIRGPRSEAEQLGITLAEQLLGQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|251787830|ref|YP_003002551.1| porphobilinogen deaminase [Dickeya zeae Ech1591] gi|247536451|gb|ACT05072.1| porphobilinogen deaminase [Dickeya zeae Ech1591] Length = 322 Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 113/284 (39%), Positives = 163/284 (57%), Gaps = 2/284 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L D H P + ++P+ T+GD + + L ++GGKGLF Sbjct: 16 LRIATRQSPLALWQAHFVKQRLEDCH--PGLQVELVPMVTRGDVLLDTPLAKVGGKGLFV 73 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + R+D RD F+S+ +L DL + Sbjct: 74 KELELALLENRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYATLDDLPEGA 133 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+ L +R D+ V D RG + TRL+KL+N AI+LA AG+KRL I Sbjct: 134 CVGTSSLRRQCQLRAYRPDLVVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLGLAHRI 193 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L+ E P+ GQGA+ +E +++ + + L+ +NHEDT V ERA L+G C+ Sbjct: 194 RTALSPEQSLPAVGQGAVGVECRLDDARTRALLAPLNHEDTATRVLAERAMNTRLEGGCQ 253 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 I +A + TLY +V A DG R G+R DA +G Sbjct: 254 VPIGSYAELQDETLYLRALVGAPDGSRIIYAERRGSRQDAETLG 297 >gi|78046235|ref|YP_362410.1| porphobilinogen deaminase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123771497|sp|Q3BXV3|HEM3_XANC5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78034665|emb|CAJ22310.1| hydroxymethylbilane synthase HemC [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 304 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 118/292 (40%), Positives = 171/292 (58%), Gaps = 4/292 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 4 LRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEMLDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ SL+ L L + Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYASLQALPLGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E I Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEARI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC Sbjct: 182 SARLDAPEWLPAPAQGAVAVECRGDDARIYSLLAVLDAGRTRACVEAERAMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +A FA +G L+ G+V ASDG++ H +G+ D +GR AQ + Sbjct: 242 VPVAAFARWEGQGLFLQGMVGSASDGRLIH-ADAHGSAEDTEALGRRVAQGL 292 >gi|86148167|ref|ZP_01066465.1| porphobilinogen deaminase [Vibrio sp. MED222] gi|218710949|ref|YP_002418570.1| porphobilinogen deaminase [Vibrio splendidus LGP32] gi|254800262|sp|B7VMD9|HEM3_VIBSL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|85834014|gb|EAQ52174.1| porphobilinogen deaminase [Vibrio sp. MED222] gi|218323968|emb|CAV20330.1| Porphobilinogen deaminase [Vibrio splendidus LGP32] Length = 312 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 110/285 (38%), Positives = 168/285 (58%), Gaps = 2/285 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++GGKGLF Sbjct: 6 PIRIATRKSPLALWQAYFVRDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GT SLRR+ LL +R D+ + + RG + TRL KL++ + AI+LA AG+KRL+ E+ Sbjct: 124 AVVGTCSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRLELEER 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+G C Sbjct: 184 IRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLTLEGGC 243 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 + I ++ G ++ +V DG +G R DA +G Sbjct: 244 QVPIGSYSLLDGDNIWLRALVGEPDGSKMVRGEISGLRKDAEALG 288 >gi|197106866|ref|YP_002132243.1| porphobilinogen deaminase [Phenylobacterium zucineum HLK1] gi|238058996|sp|B4RC21|HEM3_PHEZH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|196480286|gb|ACG79814.1| porphobilinogen deaminase [Phenylobacterium zucineum HLK1] Length = 320 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 118/283 (41%), Positives = 166/283 (58%), Gaps = 15/283 (5%) Query: 1 MEKKPF-RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-------IIPLSTKGDRITN 52 M +P RIG R S L+L + + + + P N +IP++T GDR+ + Sbjct: 1 MPTQPVVRIGARGSKLSLTQSGIVQRRIAAALGVDPDNAAEVERVAPLIPITTTGDRVQD 60 Query: 53 RTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS 112 R L EIGGKGLFT+EIE+ L+ G IDCAVHS KDMP +L +GL I+A RED RD FIS Sbjct: 61 RRLLEIGGKGLFTKEIEEALMDGRIDCAVHSMKDMPAELPEGLCIAAIPEREDPRDAFIS 120 Query: 113 HTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLA 172 + L+DL +++GT+SLRR+A L R D+ RG +ETRL KL + AILLA Sbjct: 121 RGPERLEDLTEGAILGTASLRRQAQCLHRRPDLEAKLLRGNVETRLGKLEAGEYDAILLA 180 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNN---PKAQELVKVINHEDTWDS 229 Y+G++RL + K +++ ++ PP+PGQGA+ +ET + P AQ L T + Sbjct: 181 YSGLRRLGLGHLPKSLIDPKEAPPAPGQGALAVETRAADRDLPWAQAL----RCRPTTLA 236 Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272 V ER L L+GSC++ I A+ +G T L+ DGK+ Sbjct: 237 VAAERGALIALEGSCRTPIGAHAWLEGGTCKLIVEALSPDGKL 279 >gi|258623142|ref|ZP_05718154.1| porphobilinogen deaminase [Vibrio mimicus VM573] gi|258584625|gb|EEW09362.1| porphobilinogen deaminase [Vibrio mimicus VM573] Length = 326 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 113/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 16 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLKVELVTMVTRGDVILDTPLAKVGG 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + D Sbjct: 74 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTYAKIDD 133 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 134 LPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 193 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L Sbjct: 194 LESRIRSFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTL 253 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A G ++ +V DG G R +A +G A+ + Sbjct: 254 QGGCQVPIGSYALLDGDEIWLRALVGEPDGSQIVRGEIRGPRSEAEQLGITLAEQLLGQG 313 Query: 301 NKNVFN 306 K + Sbjct: 314 AKEILE 319 >gi|262375167|ref|ZP_06068401.1| porphobilinogen deaminase [Acinetobacter lwoffii SH145] gi|262310180|gb|EEY91309.1| porphobilinogen deaminase [Acinetobacter lwoffii SH145] Length = 310 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 114/286 (39%), Positives = 166/286 (58%), Gaps = 2/286 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L D+H + ++ T+GD+I + L +IGGKGL Sbjct: 5 KTLKIATRQSPLALWQAEHIRARLQDLHA--GLQVELVTFVTQGDKILDTPLAKIGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+T S ++L Sbjct: 63 FVKELEAALLDGRADLAVHSMKDVPMALPEGLSLAVICEREDPLDAFVSNTYTSFEELPQ 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK +L+ R D+ +ID RG + TRL+KL+ + AI+LA AG+KRL + Sbjct: 123 GAKVGTSSLRRKTQILKQRPDLDIIDLRGNVGTRLSKLDAGQYDAIILASAGLKRLGLAE 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L E P+ GQGA+ +E ++ +L++ + H DT V ERAF A L+G Sbjct: 183 RIRHTLTPEVSLPAVGQGALGLECRTHDQTVLDLIQPLLHADTDACVRAERAFNAYLEGG 242 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 C+ IAG+A K + G V + DG + + G DA +G Sbjct: 243 CQVPIAGYATLKEGVISIEGRVGSIDGAVLLRAQQTGKTADAEQLG 288 >gi|289664026|ref|ZP_06485607.1| porphobilinogen deaminase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 304 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 117/292 (40%), Positives = 171/292 (58%), Gaps = 4/292 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 4 LRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ SL+ L L + Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYASLQALPLGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL + I Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLDARI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC Sbjct: 182 SARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +A FA +G L+ G+V ASDG++ H +G+ D +GR AQ + Sbjct: 242 VPVAAFARWEGEGLFLQGMVGSASDGRLIH-ADAHGSADDTEALGRRVAQGL 292 >gi|253690341|ref|YP_003019531.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259646261|sp|C6DHC2|HEM3_PECCP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|251756919|gb|ACT14995.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 313 Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 117/284 (41%), Positives = 165/284 (58%), Gaps = 2/284 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GGKGLF Sbjct: 6 IRIATRQSPLALWQARYVQQCLN--HLYPDLHVELVPMVTRGDIILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL+ L S Sbjct: 64 KELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNRYDSLEQLPEGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+KRL E+ I Sbjct: 124 CVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLAKLDNGEYDAIILAVAGLKRLGLEERI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L+ E+ P+ GQGAI IE +N+ + ++L+ +NH T V ERA L+G C+ Sbjct: 184 RCALSPEESLPAVGQGAIGIECRLNDDRIRQLLAPLNHPATAARVQAERAMNVRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 I +A +G TL+ +V A DG R GN DA IG Sbjct: 244 VPIGSYAELEGDTLWLRALVGAPDGSQMIVGERRGNVSDAEQIG 287 >gi|84393564|ref|ZP_00992318.1| porphobilinogen deaminase [Vibrio splendidus 12B01] gi|84375843|gb|EAP92736.1| porphobilinogen deaminase [Vibrio splendidus 12B01] Length = 312 Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 110/285 (38%), Positives = 167/285 (58%), Gaps = 2/285 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++GGKGLF Sbjct: 6 PIRIATRKSPLALWQAYFVRDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ G D AVHS KD+P KGL + RED RD F+S+T ++ +L Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPKGLGLVTICEREDPRDAFVSNTYNNIDELPQG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT SLRR+ LL +R D+ + + RG + TRL KL++ + AI+LA AG+KRL+ E+ Sbjct: 124 AAVGTCSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRLELEER 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+G C Sbjct: 184 IRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLTLEGGC 243 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 + I ++ G ++ +V DG +G R DA +G Sbjct: 244 QVPIGSYSLLDGDNIWLRALVGEPDGSKMVRGEISGLRKDAEALG 288 >gi|261210172|ref|ZP_05924469.1| porphobilinogen deaminase [Vibrio sp. RC341] gi|260840712|gb|EEX67261.1| porphobilinogen deaminase [Vibrio sp. RC341] Length = 311 Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 113/306 (36%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + D Sbjct: 59 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYAKIDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL Sbjct: 119 LPSGAVVGTCSLRRQCQLKSARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L Sbjct: 179 LESRIRNFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ +V DG G R +A +G A+ + Sbjct: 239 QGGCQVPIGSYALLEGDHIWLRALVGEPDGSQIVRGEIRGPRSEAEQLGITLAEQLLEQG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKEILD 304 >gi|269961540|ref|ZP_06175903.1| porphobilinogen deaminase [Vibrio harveyi 1DA3] gi|269833769|gb|EEZ87865.1| porphobilinogen deaminase [Vibrio harveyi 1DA3] Length = 312 Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 109/288 (37%), Positives = 167/288 (57%), Gaps = 2/288 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QSTPIRIATRKSPLALWQAHYVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ L +R D+ + + RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLEL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I+ + E P+ GQGA+ IE V++ + +L++ +NH+DT D V CERA L+ Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHQDTADRVRCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 G C+ I ++ G ++ +V DG + G+R DA +G Sbjct: 241 GGCQVPIGSYSLLDGDNIWLRALVGEPDGSLIVRGEIRGHRNDAEALG 288 >gi|145346959|ref|XP_001417948.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578176|gb|ABO96241.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 325 Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 115/303 (37%), Positives = 174/303 (57%), Gaps = 4/303 (1%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IGTR SPLALA A+ TR L + + + I + T GD++ ++ L +IGGKGLF Sbjct: 13 KIGTRGSPLALAQAYMTRDLLKENFPELAEDGALEICIIKTTGDKVLDQPLADIGGKGLF 72 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T E++ L+ G ID AVHS KD+PT L +G+ + LPRED+RD F+ SL L Sbjct: 73 TRELDDALLDGRIDIAVHSMKDVPTYLPEGMVLPCMLPREDVRDAFLCLKYDSLSQLPEG 132 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GT+SLRR++ LL + ++FRG +++R+ KL LLA AG+KR+ + Sbjct: 133 AVVGTASLRRQSQLLYKFPTLKCVNFRGNVQSRIRKLKEEVVDCTLLAIAGLKRMDLAQH 192 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 K I+ E+ P+ QGAI I + K + +NHEDT +V ER+FLA LDGSC Sbjct: 193 AKVIIPTEEMLPAVAQGAIGITCRAGDDKQLAFLAKLNHEDTRMAVEGERSFLAALDGSC 252 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFISNK 302 ++ IA + + F G++ + DGK E +R G + ++ G+DA ++ + Sbjct: 253 RTPIAAHCHLVDGKMQFRGLIASLDGKQVLETTREGAWDAASLLDAGKDAGAELKGKAPA 312 Query: 303 NVF 305 + F Sbjct: 313 DFF 315 >gi|229520088|ref|ZP_04409516.1| porphobilinogen deaminase [Vibrio cholerae TM 11079-80] gi|229342876|gb|EEO07866.1| porphobilinogen deaminase [Vibrio cholerae TM 11079-80] Length = 317 Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 113/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDAILDTPLAKVGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ +V DG G R A +G A+ + Sbjct: 245 QGGCQVPIGSYALLEGDHIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304 Query: 301 NKNVFN 306 K + Sbjct: 305 AKEILE 310 >gi|332304814|ref|YP_004432665.1| porphobilinogen deaminase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172143|gb|AEE21397.1| porphobilinogen deaminase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 309 Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 172/296 (58%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LA+ A ++ L++ H P + ++P+ST+GDRI + L +IGG Sbjct: 1 MSDRVIRIATRKSTLAMWQAEYVQAKLLEAH--PQLKVELVPMSTQGDRILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E + G D AVHS KD+P G + RE+ D F+S+T ++++ Sbjct: 59 KGLFIKELEIAMSEGRADIAVHSMKDVPVDFPDGFGLHCICERENPYDAFVSNTYSAIEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+++ D RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPQGAVVGTSSLRRQCQIRSARPDLTIRDLRGNVNTRLAKLDEGQYDAIILAAAGLIRLN 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ IK + P+ GQGA+ IE ++ + EL+K +NH DT V ERA A+L Sbjct: 179 MQERIKAYIEPTVSLPAVGQGAVGIECRNDDAELIELLKPLNHADTESRVKAERAMNAKL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ I +A G LY G+V + DG + + + G+ DA +IG D A+ + Sbjct: 239 NGGCQVPIGSYAVLNGDELYLRGLVGSPDGSLLLQAEKRGSINDAQSIGIDVAEQL 294 >gi|292486675|ref|YP_003529545.1| Porphobilinogen deaminase [Erwinia amylovora CFBP1430] gi|292897912|ref|YP_003537281.1| porphobilinogen deaminase [Erwinia amylovora ATCC 49946] gi|291197760|emb|CBJ44855.1| porphobilinogen deaminase [Erwinia amylovora ATCC 49946] gi|291552092|emb|CBA19129.1| Porphobilinogen deaminase [Erwinia amylovora CFBP1430] gi|312170741|emb|CBX79003.1| Porphobilinogen deaminase [Erwinia amylovora ATCC BAA-2158] Length = 313 Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 111/289 (38%), Positives = 167/289 (57%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L+D H P + ++P+ T+GD I + L ++GG Sbjct: 1 MSDKILRIATRKSPLALWQAKYVQQRLIDCH--PRLRVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++SG D AVHS KD+P +GL + A R+D D F+S+ S+ Sbjct: 59 KGLFVKELENAMLSGHADIAVHSMKDVPVAFPQGLGLVAICERDDPHDAFVSNHYASVDS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPAGAIVGTSSLRRQCQLSARRPDLVIHSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I++++ E+ P+ GQGA+ IE +++ + L+ +NH+DT V+ ERA L Sbjct: 179 LSGRIRQVMPAEESLPAVGQGAVGIECRLDDMRTIGLLAALNHDDTACRVSAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I +A +G L+ G+V + DG R G+R DA +G Sbjct: 239 EGGCQVPIGSYALLEGDRLWLRGLVGSPDGSQMVRGERRGSRADAEKMG 287 >gi|229593301|ref|YP_002875420.1| porphobilinogen deaminase [Pseudomonas fluorescens SBW25] gi|259646262|sp|C3K424|HEM3_PSEFS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|229365167|emb|CAY53424.1| porphobilinogen deaminase [Pseudomonas fluorescens SBW25] Length = 313 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 116/296 (39%), Positives = 167/296 (56%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLKVSLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYASLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPLGSIVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I +++ED P+ GQGA+ IE + L+K ++H DT V ERA L Sbjct: 179 FEDRITSAISVEDSLPAGGQGAVGIECRTADSDIHALLKPLDHHDTEVRVTAERALNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IA +A +G L+ G+V +G G +CDA +G AQ + Sbjct: 239 NGGCQVPIACYAVLEGENLWLRGLVGDPEGGNLLTAEVRGPQCDATALGIQVAQAL 294 >gi|308803813|ref|XP_003079219.1| putative porphobilinogen deaminase (ISS) [Ostreococcus tauri] gi|116057674|emb|CAL53877.1| putative porphobilinogen deaminase (ISS) [Ostreococcus tauri] Length = 441 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 120/305 (39%), Positives = 173/305 (56%), Gaps = 8/305 (2%) Query: 7 RIGTRCSPLALAHAFETRSSLMD----VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 RIGTR SPLALA A+ TR L + + + I II T GD++ ++ L +IGGKG Sbjct: 48 RIGTRGSPLALAQAYMTRDLLKENFPELAEDGALEICII--KTTGDKVLDQPLADIGGKG 105 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT E++ L+ G ID AVHS KD+PT L +G+ + LPRED+RD F+ SL DL Sbjct: 106 LFTRELDDALLDGRIDIAVHSMKDVPTYLPEGMVLPCMLPREDVRDAFLCLKYDSLDDLP 165 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GT+SLRR++ LL + ++FRG +++R+ KL LLA AG+KR+ Sbjct: 166 EGAVVGTASLRRQSQLLYKYPTLKCVNFRGNVQSRIRKLKEEVVDCTLLAIAGLKRMDLA 225 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + K I+ E P+ QGAI I + K + +NHEDT +V ERAFLA LDG Sbjct: 226 QHAKLIIPTEQMLPAVAQGAIGITCRGGDDKQLAFLAKLNHEDTRMAVEGERAFLAALDG 285 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFIS 300 SC++ IA + + F G++ + DGK E +R G + + G DA ++ + Sbjct: 286 SCRTPIAAHCHNVDGKMQFRGLIASLDGKEVLETTREGAWDAASLLAAGTDAGAELKGKA 345 Query: 301 NKNVF 305 + F Sbjct: 346 PADFF 350 >gi|37528461|ref|NP_931806.1| porphobilinogen deaminase [Photorhabdus luminescens subsp. laumondii TTO1] gi|55976477|sp|Q7MYN1|HEM3_PHOLL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|36787899|emb|CAE17016.1| porphobilinogen deaminase (PBG) (hydroxymethylbilane synthase) (HMBS) (pre-uroporphyrinogen synthase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 313 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 116/296 (39%), Positives = 163/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A + L H P + ++P+ T+GD I + L +IGG Sbjct: 1 MSTKTIRIATRQSPLAMWQALYVQQKLQQCH--PDLEVQLVPMVTQGDVILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S SL + Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPISFPEGLGLVTICERDDPRDAFVSVKYHSLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ V D RG + TRLNKL+N AI+LA AG+KRLK Sbjct: 119 LPTGSIVGTSSLRRQCQLRELRPDLIVRDLRGNVGTRLNKLDNGHYDAIILAVAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L E P+ GQGA+ IE +++ + Q L+ +NH DT V ERA L Sbjct: 179 LHERIRTPLTAEQSLPAVGQGAVGIECRLDDQQTQTLLAPLNHYDTEVCVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ I +A + ++ +V A DG + R DA G + A+ + Sbjct: 239 EGGCQVPIGSYAIWQDGKIWLRALVGAPDGSVIIRGERTALPKDACQAGVELAEEL 294 >gi|194336060|ref|YP_002017854.1| porphobilinogen deaminase [Pelodictyon phaeoclathratiforme BU-1] gi|238058995|sp|B4SFI2|HEM3_PELPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|194308537|gb|ACF43237.1| porphobilinogen deaminase [Pelodictyon phaeoclathratiforme BU-1] Length = 313 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 118/270 (43%), Positives = 159/270 (58%), Gaps = 2/270 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG G Sbjct: 2 KKQLIIGTRSSPLALWQAEFTKAEL--SRHFPELDITLKLVKTTGDVLLDSPLSKIGDMG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT++IEK LI+ EID AVHS KD+PT GL I+++ RED RDV IS LKDL Sbjct: 60 LFTKDIEKHLITKEIDLAVHSLKDVPTATPDGLIITSFTEREDTRDVIISKNGVKLKDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ + TSSLRR + LL R D+ + D RG + TR K +N + A++LAYAG+ RL Sbjct: 120 QNAKMATSSLRRMSQLLSLRPDLDIRDIRGNLNTRFQKFDNGEFDAMMLAYAGVFRLNFS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EIL E P+ GQGA+ IET V++ + +E+V+++NH T ERA L L G Sbjct: 180 DRISEILPHEVMLPAVGQGALGIETRVDDEQTREIVRILNHSTTEYCCRAERALLRHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272 C+ I +A K TL V + DGKI Sbjct: 240 GCQIPIGAYASFKNGTLTLLAYVGSVDGKI 269 >gi|301062020|ref|ZP_07202731.1| hydroxymethylbilane synthase [delta proteobacterium NaphS2] gi|300443871|gb|EFK07925.1| hydroxymethylbilane synthase [delta proteobacterium NaphS2] Length = 316 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 116/292 (39%), Positives = 172/292 (58%), Gaps = 4/292 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL + + L H ++ +I + T GD+I + L++IGGKGLF Sbjct: 3 IRIGTRGSKLALTQSEWIKEQLEIRHS--GIHVDLIKIKTTGDKILDTPLSKIGGKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ ID AVHS KD+P +L + L +S + PRED D I+ + L L + Sbjct: 61 KEIEEALLQNRIDVAVHSMKDVPAELPEALMLSTFPPREDPSDALIAQENRRLDQLPEGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR A LL R D++++ RG ++TRL KL + + A++LA AG+ RL VI Sbjct: 121 RVGTSSLRRGAQLLHLRPDLTLVPLRGNVDTRLGKLKSGEVEAVILATAGLNRLGLSGVI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + P+ GQGA+ +E ++ + + +NH+DT +V ER FL L+G C+ Sbjct: 181 TQRIPFHQLLPAVGQGALGLEVRRDDRETIRRLDFLNHDDTRTAVTAERGFLKTLEGGCQ 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNGNRCDAINIGRDAAQYI 296 IAGFA G L F G+V DG +I+ E++ G+R DA IG +AA+ + Sbjct: 241 VPIAGFAQIVGDNLSFEGLVAELDGSRIYKEIA-TGSRDDAEKIGIEAAKTL 291 >gi|218781846|ref|YP_002433164.1| porphobilinogen deaminase [Desulfatibacillum alkenivorans AK-01] gi|218763230|gb|ACL05696.1| porphobilinogen deaminase [Desulfatibacillum alkenivorans AK-01] Length = 310 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 120/301 (39%), Positives = 171/301 (56%), Gaps = 2/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR SPLAL A E ++L++ + P ++ + TKGD+I + L ++GGKGLF Sbjct: 7 IKIGTRGSPLALWQA-EHVAALLE-RRNPNVKTELVVIKTKGDKILDVPLAKVGGKGLFV 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G D AVHS KD+P++ GL ++A + RED RD I A+ L DL ++ Sbjct: 65 KEIEESLLDGRTDMAVHSMKDVPSEFPPGLCLAAIMEREDPRDALICSRAKGLLDLPPNA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSSLRR A LL D+ + RG I TRL+KL + AI+LA AG+KR+ + + Sbjct: 125 KIGTSSLRRSAQLLALMPDLQIEPLRGNIGTRLDKLTSLNLDAIVLAAAGVKRMAMDDKV 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E + E P+ GQGA+ IE ++P A L + +NHE T V ERAFL LDG C+ Sbjct: 185 SEYIPEETVLPAVGQGAMGIEIREDDPVAGPLARALNHEPTQVIVTGERAFLKRLDGGCQ 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A KG L G++ DG S +G + DA +G A+ + K V Sbjct: 245 VPVAAHGRLKGDFLQLTGVIAGVDGTPIFRDSVSGKKEDAKELGVKLAEKLLNAGGKAVL 304 Query: 306 N 306 + Sbjct: 305 D 305 >gi|153835503|ref|ZP_01988170.1| porphobilinogen deaminase [Vibrio harveyi HY01] gi|156972662|ref|YP_001443569.1| porphobilinogen deaminase [Vibrio harveyi ATCC BAA-1116] gi|166217790|sp|A7MXU9|HEM3_VIBHB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|148867929|gb|EDL67139.1| porphobilinogen deaminase [Vibrio harveyi HY01] gi|156524256|gb|ABU69342.1| hypothetical protein VIBHAR_00314 [Vibrio harveyi ATCC BAA-1116] Length = 312 Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 109/288 (37%), Positives = 167/288 (57%), Gaps = 2/288 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QSTPIRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ L +R D+ + + RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLEL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I+ + E P+ GQGA+ IE V++ + +L++ +NH+DT D V CERA L+ Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHQDTADRVRCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 G C+ I ++ G ++ +V DG + G+R DA +G Sbjct: 241 GGCQVPIGSYSLLDGDNIWLRALVGEPDGSLIVRGEIRGHRNDAEALG 288 >gi|16124327|ref|NP_418891.1| porphobilinogen deaminase [Caulobacter crescentus CB15] gi|221233009|ref|YP_002515445.1| porphobilinogen deaminase [Caulobacter crescentus NA1000] gi|24211766|sp|Q9ABZ8|HEM3_CAUCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800240|sp|B8GXG1|HEM3_CAUCN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|13421169|gb|AAK22059.1| porphobilinogen deaminase [Caulobacter crescentus CB15] gi|220962181|gb|ACL93537.1| porphobilinogen deaminase [Caulobacter crescentus NA1000] Length = 322 Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 116/276 (42%), Positives = 160/276 (57%), Gaps = 9/276 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPP--------HNIVIIPLSTKGDRITNRT 54 + P RIG R S L+LA + ++ + +P +IP+ T GDRI +R Sbjct: 4 QPPIRIGARGSKLSLAQSGLMQARIAHALGVPAGASKDEIEAAAPLIPIVTSGDRIQDRR 63 Query: 55 LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT 114 L EIGGKGLFT+EIE+ L+ G IDCAVHS KDMP +L GL ++A RED RD FISH Sbjct: 64 LMEIGGKGLFTKEIEEALLDGRIDCAVHSLKDMPAELPPGLVLAATPEREDPRDAFISHV 123 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 + L+DL + +GT+SLRR+A L R D+ ++ RG ++TRL KL +A AILLA + Sbjct: 124 CERLEDLPKGARLGTASLRRQAQALHVRPDLEIVMLRGNVDTRLAKLERGEADAILLAQS 183 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G+ RL + + L+ + PP+PGQGA+ IET + A L + + T +V ER Sbjct: 184 GLNRLGLGHLTRSWLDPDACPPAPGQGALVIETRAEDIGAPWL-EAVRCRQTTIAVAAER 242 Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 L L+GSC++AI A G+ L L DG Sbjct: 243 GALLALEGSCRTAIGARAILDGARLSMIVEALTPDG 278 >gi|262404857|ref|ZP_06081411.1| porphobilinogen deaminase [Vibrio sp. RC586] gi|262348941|gb|EEY98080.1| porphobilinogen deaminase [Vibrio sp. RC586] Length = 311 Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 116/307 (37%), Positives = 171/307 (55%), Gaps = 4/307 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + D Sbjct: 59 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTYVKIDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL Sbjct: 119 LPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L Sbjct: 179 LESRIRNFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G C+ I +A G ++ +V DG +I H R G R +A +G A+ + Sbjct: 239 QGGCQVPIGSYALLDGDDIWLRALVGEPDGSQIVHGEIR-GPRSEAEQLGITLAEQLLEQ 297 Query: 300 SNKNVFN 306 K + Sbjct: 298 GAKEILE 304 >gi|166710503|ref|ZP_02241710.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 304 Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 116/292 (39%), Positives = 172/292 (58%), Gaps = 4/292 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 4 LRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ G+ DCAVHS KD+P +L + A L R D D +S+ SL+ L L + Sbjct: 62 KELELAVLRGDADCAVHSLKDVPMELDDPFVLPAILERGDPADALVSNLYASLQALPLGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL + I Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLDARI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC Sbjct: 182 SARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +A FA +G L+ G+V ASDG++ H +G+ D ++GR AQ + Sbjct: 242 VPVAAFARWEGEGLFLQGMVGSASDGRLIH-ADAHGSADDTEDLGRRVAQGL 292 >gi|163748699|ref|ZP_02155952.1| porphobilinogen deaminase [Shewanella benthica KT99] gi|161331809|gb|EDQ02613.1| porphobilinogen deaminase [Shewanella benthica KT99] Length = 309 Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 118/306 (38%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLAL A ++ L H P + ++P+STKGD I + L ++GG Sbjct: 1 MSQNVIRIATRKSPLALWQAEFVKAELEKFH--PGLTVELLPMSTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P GL + RED RD F+S+ +S+ D Sbjct: 59 KGLFVKELEVAILEDRADIAVHSIKDVPVDFPDGLGLEVICEREDPRDAFVSNDYKSIGD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ +ID RG + TRL KL+ AI+LA AG+KRLK Sbjct: 119 LPQGAVVGTSSLRRQCQIRGMRPDLKIIDLRGNVGTRLGKLDAGNYDAIILAAAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I ++ ED P+ GQGA+ IE +N + + L+ + H +T V ERA L Sbjct: 179 LEERITSFISTEDSLPANGQGAVGIECRTDNERVKALLAPLEHAETRFRVTAERAMNTHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA +G TL G+V DG + G + DA IG A+ + Sbjct: 239 EGGCQVPIGAFAEIQGDTLTLRGLVGNPDGSKIITGTCVGPKTDAKAIGIALAEELLGKG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKEILD 304 >gi|328472411|gb|EGF43277.1| porphobilinogen deaminase [Vibrio parahaemolyticus 10329] Length = 312 Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 112/288 (38%), Positives = 165/288 (57%), Gaps = 2/288 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QSTPIRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T S+ +L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSSIDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRLK Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I+ + E P+ GQGA+ IE V++ + +L++ +NH+DT D V CERA L+ Sbjct: 181 EDRIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHKDTADRVLCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 G C+ I +A +G ++ +V DG G+R D +G Sbjct: 241 GGCQVPIGSYALLEGDEIWLRALVGEPDGSEIVRGEVRGHRKDGEALG 288 >gi|254230107|ref|ZP_04923503.1| porphobilinogen deaminase [Vibrio sp. Ex25] gi|262392880|ref|YP_003284734.1| porphobilinogen deaminase [Vibrio sp. Ex25] gi|151937352|gb|EDN56214.1| porphobilinogen deaminase [Vibrio sp. Ex25] gi|262336474|gb|ACY50269.1| porphobilinogen deaminase [Vibrio sp. Ex25] Length = 312 Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 110/288 (38%), Positives = 166/288 (57%), Gaps = 2/288 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QSTPIRIATRKSPLALWQAYFVKDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSNIDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRLK Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+ Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRLDDERLLKLLEPLNHQDTVDRVLCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 G C+ I +A G ++ +V DG G+R D +G Sbjct: 241 GGCQVPIGSYALLDGDNIWLRALVGEPDGSEIVRGEIRGHRKDGEALG 288 >gi|261823396|ref|YP_003261502.1| porphobilinogen deaminase [Pectobacterium wasabiae WPP163] gi|261607409|gb|ACX89895.1| porphobilinogen deaminase [Pectobacterium wasabiae WPP163] Length = 313 Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 116/284 (40%), Positives = 167/284 (58%), Gaps = 2/284 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GGKGLF Sbjct: 6 IRIATRQSPLALWQARYVQQRLN--HLYPDLSVELVPMVTRGDIILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL L S Sbjct: 64 KELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNHYDSLDQLPQGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL E+ I Sbjct: 124 CVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLEERI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L+ E+ P+ GQGAI IE +++ + ++L+ +NH DT V ERA L+G C+ Sbjct: 184 RCALSPEESLPAVGQGAIGIECRLDDDRIRQLLAPLNHTDTAARVLAERAMNVRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 I +A +G+TL+ +V A DG R G+ DA IG Sbjct: 244 VPIGSYAELEGNTLWLRALVGAPDGSQMIVGERKGSVVDAEKIG 287 >gi|260774857|ref|ZP_05883759.1| porphobilinogen deaminase [Vibrio coralliilyticus ATCC BAA-450] gi|260609282|gb|EEX35437.1| porphobilinogen deaminase [Vibrio coralliilyticus ATCC BAA-450] Length = 312 Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 108/288 (37%), Positives = 167/288 (57%), Gaps = 2/288 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QSTPIRIATRKSPLALWQAYYVRDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYANIDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ + +R D+ + + RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 121 PQGAVVGTCSLRRQCQIKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLEL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+ Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 G C+ I ++ G ++ +V DG G+R DA +G Sbjct: 241 GGCQVPIGSYSLLDGDDIWLRALVGEPDGSKIVRGEIKGSRADAEKLG 288 >gi|94498044|ref|ZP_01304607.1| porphobilinogen deaminase [Sphingomonas sp. SKA58] gi|94422479|gb|EAT07517.1| porphobilinogen deaminase [Sphingomonas sp. SKA58] Length = 313 Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 117/276 (42%), Positives = 157/276 (56%), Gaps = 5/276 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P R+GTR SPLALA A T +L+ H I I+ + T GDRI +R L +IGGK L Sbjct: 11 RPLRLGTRGSPLALAQARLTAQALIAAHGWSADAIEIVTVQTSGDRIQDRALADIGGKAL 70 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +T+E+++ L++GE D +VHS KD+ T I+A LPR D RD I A S L Sbjct: 71 WTKELDRALVAGETDLSVHSMKDVETVRHDIFHIAAMLPRADPRDKLIG--AASFDALPP 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + ++GTSS RR A + R R D ++ FRG + TRL KL + HA LLA AG+ RL + Sbjct: 129 NPIVGTSSPRRGAQVKRLRPDATITLFRGNVATRLAKLAAGEVHATLLAAAGLDRLDQGN 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V I+ ++ P+P QGA+ IE N E V INH DT+D+V ERA L L G+ Sbjct: 189 V-GTIIPVDTMLPAPSQGAVGIEILAGNAPVIEAVAAINHRDTFDTVMMERAVLRGLGGT 247 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 C S IA A G L +++ DG+ VS N Sbjct: 248 CHSPIAALALVDGDDLMLRAEIISPDGQ--ETVSEN 281 >gi|289667461|ref|ZP_06488536.1| porphobilinogen deaminase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 304 Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 116/292 (39%), Positives = 171/292 (58%), Gaps = 4/292 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 4 LRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ G+ DCAVHS KD+P +L + A L R D D +S+ SL+ L L + Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMELDDPFVLPAILERGDPADALVSNLYASLQALPLGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL + I Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLDARI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC Sbjct: 182 SARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +A FA +G L+ G+V ASDG++ H +G+ D +GR AQ + Sbjct: 242 VPVAAFARWEGEGLFLQGMVGSASDGRLIH-ADAHGSADDTEALGRRVAQGL 292 >gi|320354663|ref|YP_004196002.1| hydroxymethylbilane synthase [Desulfobulbus propionicus DSM 2032] gi|320123165|gb|ADW18711.1| hydroxymethylbilane synthase [Desulfobulbus propionicus DSM 2032] Length = 319 Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 112/301 (37%), Positives = 172/301 (57%), Gaps = 2/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+ + ++ + H P + ++ ++TKGDRI + L ++GGKGLF Sbjct: 5 LRIGTRASLLAVTQSTWVKTQIEQAH--PGTRVELVKITTKGDRILDVPLAKVGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++GE+D AVHS KD+PT+L +GL I RE D F+S T +L DL + Sbjct: 63 KEIEDALLAGEVDLAVHSMKDVPTELPEGLHIGVIPVRETPYDAFLSKTCTTLADLPQGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSSLRRK+ L+ R D+ ++D RG I+TRL KL+ AI+LA AG++RL E I Sbjct: 123 TIGTSSLRRKSQLMALRPDLDIVDLRGNIDTRLRKLDEGVYDAIILAGAGLRRLHLEHRI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +L P+ QGA+ IE ++ + + ++ ++H +T +V ERAFL L+G C+ Sbjct: 183 TALLEPTQMLPAISQGALGIELRQDDTELADGLRFLHHGETAVAVEAERAFLLRLEGGCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IA A ++ G++ + DG+ + + G A +G AQ + K + Sbjct: 243 VPIAAHATLDSGSVTLTGLIASVDGRQILKEATTGPAEQAARLGAQLAQTLLDRGGKAIL 302 Query: 306 N 306 + Sbjct: 303 D 303 >gi|258626632|ref|ZP_05721462.1| porphobilinogen deaminase [Vibrio mimicus VM603] gi|258581136|gb|EEW06055.1| porphobilinogen deaminase [Vibrio mimicus VM603] Length = 311 Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 113/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLKVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + D Sbjct: 59 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTYAKIDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL Sbjct: 119 LPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L Sbjct: 179 LESRIRNFIEPEQSLPAVGQGAVGIECRLDDQRVRELLVPLNHTDTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A G ++ +V DG G R +A +G A+ + Sbjct: 239 QGGCQVPIGSYALLDGDEIWLRALVGEPDGSQIVRGEIRGPRSEAEQLGITLAEQLLGQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|27364543|ref|NP_760071.1| porphobilinogen deaminase [Vibrio vulnificus CMCP6] gi|37678265|ref|NP_932874.1| porphobilinogen deaminase [Vibrio vulnificus YJ016] gi|33301181|sp|Q8DD85|HEM3_VIBVU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|55976475|sp|Q7MQC7|HEM3_VIBVY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|27360662|gb|AAO09598.1| porphobilinogen deaminase [Vibrio vulnificus CMCP6] gi|37197004|dbj|BAC92845.1| porphobilinogen deaminase [Vibrio vulnificus YJ016] Length = 312 Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 109/285 (38%), Positives = 163/285 (57%), Gaps = 2/285 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++GGKGLF Sbjct: 6 PIRIATRKSPLALWQAYYVKDALQKAH--PGLEVELVTMVTKGDVILDTPLAKVGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + +L Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHHVDELPQG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GT SLRR+ L +R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ E+ Sbjct: 124 AVVGTCSLRRQCQLKAYRPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELEER 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + E P+ GQGA+ IE N+ + +L++ +NH DT D V CERA L+G C Sbjct: 184 IRSFIEPEQSLPAVGQGAVGIECRTNDERILKLLEPLNHADTADRVKCERAMNLTLEGGC 243 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 + I +A +G ++ +V DG G R A +G Sbjct: 244 QVPIGSYALLEGDEIWLRALVGEPDGSEIVRGEIRGPRAQAEQLG 288 >gi|91227534|ref|ZP_01261871.1| porphobilinogen deaminase [Vibrio alginolyticus 12G01] gi|91188558|gb|EAS74850.1| porphobilinogen deaminase [Vibrio alginolyticus 12G01] Length = 312 Score = 205 bits (521), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 110/288 (38%), Positives = 165/288 (57%), Gaps = 2/288 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QSTPIRIATRKSPLALWQAYFVKDALQAAH--PSLEVELVTMVTKGDVILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + +L Sbjct: 61 GLFVKELEIAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSHIDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRLK Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+ Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRLDDERLLKLLEPLNHQDTVDRVLCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 G C+ I +A G ++ +V DG G+R D +G Sbjct: 241 GGCQVPIGSYALLDGDNIWLRALVGEPDGSEIVRGEIRGHRKDGEALG 288 >gi|320154944|ref|YP_004187323.1| porphobilinogen deaminase [Vibrio vulnificus MO6-24/O] gi|319930256|gb|ADV85120.1| porphobilinogen deaminase [Vibrio vulnificus MO6-24/O] Length = 312 Score = 205 bits (521), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 109/285 (38%), Positives = 163/285 (57%), Gaps = 2/285 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++GGKGLF Sbjct: 6 PIRIATRKSPLALWQAYYVKDALQKAH--PGLEVELVTMVTKGDVILDTPLAKVGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + +L Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHHVDELPQG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GT SLRR+ L +R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ E+ Sbjct: 124 AVVGTCSLRRQCQLKAYRPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELEER 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + E P+ GQGA+ IE N+ + +L++ +NH DT D V CERA L+G C Sbjct: 184 IRSFIEPEQSLPAVGQGAVGIECRTNDERILKLLEPLNHTDTADRVKCERAMNLTLEGGC 243 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 + I +A +G ++ +V DG G R A +G Sbjct: 244 QVPIGSYALLEGDEIWLRALVGEPDGSEIVRGEIRGPRAQAEQLG 288 >gi|323500165|ref|ZP_08105110.1| porphobilinogen deaminase [Vibrio sinaloensis DSM 21326] gi|323314794|gb|EGA67860.1| porphobilinogen deaminase [Vibrio sinaloensis DSM 21326] Length = 312 Score = 205 bits (521), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 109/288 (37%), Positives = 166/288 (57%), Gaps = 2/288 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QSSPIRIATRKSPLALWQAYFVRDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T S+ +L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPSGLGLVTICEREDPRDAFVSNTYNSIDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ L +R D+ + + RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDLIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLEL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+ Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHQDTADRVLCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 G C+ I +A +G ++ +V DG G R ++ +G Sbjct: 241 GGCQVPIGSYALLEGDDIWLRALVGEPDGSQIVRGEIKGPRSESEALG 288 >gi|310766129|gb|ADP11079.1| porphobilinogen deaminase [Erwinia sp. Ejp617] Length = 313 Score = 205 bits (521), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 110/289 (38%), Positives = 167/289 (57%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L+D H P + ++P+ T+GD I + L ++GG Sbjct: 1 MSDKILRIATRKSPLALWQAKYVQQRLIDCH--PGLRVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++SG D AVHS KD+P +GL + A R+D D F+S+ S+ Sbjct: 59 KGLFVKELEQAMLSGSADIAVHSMKDVPVAFPQGLGLVAICERDDPHDAFVSNRHASVDS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPQGAIVGTSSLRRQCQLSARRPDLVIHSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I++++ E+ P+ GQGA+ IE +++ L+ +NH++T V+ ERA L Sbjct: 179 LSDRIRQVMPAEESLPAVGQGAVGIECRLDDMHTIGLLAALNHDETACRVSAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I +A +G L+ G+V + DG R G+R DA +G Sbjct: 239 EGGCQVPIGSYALLEGDQLWLRGLVGSPDGSQMVRGERRGSRADAEKMG 287 >gi|269964925|ref|ZP_06179095.1| porphobilinogen deaminase [Vibrio alginolyticus 40B] gi|269830401|gb|EEZ84625.1| porphobilinogen deaminase [Vibrio alginolyticus 40B] Length = 312 Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 110/288 (38%), Positives = 165/288 (57%), Gaps = 2/288 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QSTPIRIATRKSPLALWQAYFVKDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + +L Sbjct: 61 GLFVKELEIAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSHIDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRLK Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+ Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRLDDERLLKLLEPLNHQDTVDRVLCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 G C+ I +A G ++ +V DG G+R D +G Sbjct: 241 GGCQVPIGSYALLDGDNIWLRALVGEPDGSEIVRGEIRGHRKDGEALG 288 >gi|332290269|ref|YP_004421121.1| porphobilinogen deaminase [Gallibacterium anatis UMN179] gi|330433165|gb|AEC18224.1| porphobilinogen deaminase [Gallibacterium anatis UMN179] Length = 309 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 114/296 (38%), Positives = 166/296 (56%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+K RI TR SPLAL A + L ++ P + ++ + TKGD + + L +IGG Sbjct: 1 MQKDVLRIATRQSPLALWQANYIKHKLQVLY--PQLTVELVTMVTKGDVLLDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P + +GL +S RED RD F+S+ SL + Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPMQFPQGLHLSVICEREDPRDAFVSNRYASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++V+GTSSLRR+ L R DI + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPQNAVVGTSSLRRQCQLKALRPDIELKTLRGNVGTRLRKLDEGEYDAIILASAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +++ I+ + E P+ GQGA+ +E ++ +L+K + H+DTWD V ERA L Sbjct: 179 EQQRIRSFIAPEVSLPAVGQGAVGVECRQDDEWVNQLLKPLLHQDTWDRVIAERAMNNRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 G C+ IAG+A G L+ +V A DG R A +G A+ + Sbjct: 239 QGGCQVPIAGYAILDGEQLFLRALVGAVDGSKVLRAEATAVRSQAEQLGIQVAEML 294 >gi|50123108|ref|YP_052275.1| porphobilinogen deaminase [Pectobacterium atrosepticum SCRI1043] gi|55976381|sp|Q6CZG3|HEM3_ERWCT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|49613634|emb|CAG77085.1| porphobilinogen deaminase [Pectobacterium atrosepticum SCRI1043] Length = 313 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 116/284 (40%), Positives = 166/284 (58%), Gaps = 2/284 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GGKGLF Sbjct: 6 IRIATRQSPLALWQARYVQQCLN--HFYPDLHVELVPMVTRGDIILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL+ L S Sbjct: 64 KELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNRYDSLEQLPEGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+KRL E+ I Sbjct: 124 CVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLAKLDNGEYDAIILAVAGLKRLGLEERI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L+ E+ P+ GQGAI IE +++ + ++L+ +NH DT V ERA L+G C+ Sbjct: 184 RCALSPEESLPAVGQGAIGIECRLDDDRIRQLLAPLNHTDTAARVLAERAMNVRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 I +A +G TL+ +V A DG R G+ DA IG Sbjct: 244 VPIGSYAELEGDTLWLRALVGAPDGSQMIVGERKGSVSDAEKIG 287 >gi|294142612|ref|YP_003558590.1| porphobilinogen deaminase [Shewanella violacea DSS12] gi|293329081|dbj|BAJ03812.1| porphobilinogen deaminase [Shewanella violacea DSS12] Length = 309 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 116/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLAL A ++ L H P + ++P+STKGD I + L ++GG Sbjct: 1 MSQNVIRIATRKSPLALWQAEFVKAELEKFH--PGLTVELLPMSTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+ +S+ D Sbjct: 59 KGLFVKELEIAMLDGRADIAVHSIKDVPVDFPDGLGLEVICEREDPRDAFVSNDYKSIDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK Sbjct: 119 LPKGAVVGTSSLRRQCQIRAMRPDLKITDLRGNVGTRLGKLDAGNYDAIILAAAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I ++ E+ P+ GQGA+ IE ++ + + L+ + H +T V ERA L Sbjct: 179 LEERISSFISAEESLPANGQGAVGIECRTDDERVKALLAPLEHTETRYRVTAERAMNTHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I FA +G TL G+V DG + G + DA IG A+ + Sbjct: 239 QGGCQVPIGAFAEIQGDTLTLRGLVGNPDGSKIITGTSVGPKTDAKAIGITLAKELLSKG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKEILD 304 >gi|259906881|ref|YP_002647237.1| porphobilinogen deaminase [Erwinia pyrifoliae Ep1/96] gi|224962503|emb|CAX53958.1| Porphobilinogen deaminase [Erwinia pyrifoliae Ep1/96] gi|283476674|emb|CAY72503.1| hemC [Erwinia pyrifoliae DSM 12163] Length = 313 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 110/289 (38%), Positives = 166/289 (57%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L+D H P + ++P+ T+GD I + L ++GG Sbjct: 1 MSDKILRIATRKSPLALWQAKYVQQRLIDCH--PGLRVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++SG D AVHS KD+P +GL + A R+D D F+S+ S+ Sbjct: 59 KGLFVKELEQAMLSGSADIAVHSMKDVPVAFPQGLGLVAICERDDPHDAFVSNRHASVDS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPQGAIVGTSSLRRQCQLSARRPDLVIHSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I++++ E+ P+ GQGA+ IE + + L+ +NH++T V+ ERA L Sbjct: 179 LSDRIRQVMPAEESLPAVGQGAVGIECRLEDMHTIGLLAALNHDETACRVSAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I +A +G L+ G+V + DG R G+R DA +G Sbjct: 239 EGGCQVPIGSYALLEGDQLWLRGLVGSPDGSQMVRGERRGSRADAEKMG 287 >gi|193212401|ref|YP_001998354.1| porphobilinogen deaminase [Chlorobaculum parvum NCIB 8327] gi|209572771|sp|P28464|HEM3_CHLP8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|193085878|gb|ACF11154.1| porphobilinogen deaminase [Chlorobaculum parvum NCIB 8327] Length = 312 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 114/269 (42%), Positives = 160/269 (59%), Gaps = 2/269 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK IGTR SPLAL A T++ L + P NI + + T GD + + L++IG G Sbjct: 2 KKEIIIGTRSSPLALWQAEFTKAEL--SKRFPDMNITLKLVKTTGDVLLDSPLSKIGDMG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT++IEK L++GEID AVHS KD+PT +GL I+++ RED RDV IS + + L DL Sbjct: 60 LFTKDIEKHLLAGEIDLAVHSLKDVPTGTPEGLVITSFTEREDTRDVIISKSGKGLMDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ + TSSLRR + LL R D+ ++D RG + TR K + A++LAYAG+ RL+ Sbjct: 120 QNAKMATSSLRRMSQLLSLRPDLEIMDIRGNLNTRFKKFDEGDFDAMMLAYAGVYRLEFS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EIL E P+ GQGA+ IET ++ + +E+V+V+N ++T ERA L L G Sbjct: 180 DRITEILPHETMLPAVGQGALGIETRTDDAETREIVRVLNDDNTEMCCRAERALLRHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 C+ I F TL V + DGK Sbjct: 240 GCQIPIGSFGSYIDGTLKLLAFVGSVDGK 268 >gi|255020135|ref|ZP_05292205.1| Porphobilinogen deaminase [Acidithiobacillus caldus ATCC 51756] gi|254970428|gb|EET27920.1| Porphobilinogen deaminase [Acidithiobacillus caldus ATCC 51756] Length = 319 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 117/302 (38%), Positives = 170/302 (56%), Gaps = 4/302 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR SPLAL A R+ L+ H P + I+P++T+GDR+ L EIGGKGLF Sbjct: 17 PLRIGTRASPLALWQAEHVRAGLLRAH--PEIPVEIVPMTTQGDRMLAVPLHEIGGKGLF 74 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE L+ G +D AVHS KD+P + +GL+I+A L RED+RD ++S+T +DL Sbjct: 75 VKEIEAALLEGTVDLAVHSMKDVPAQQPEGLEIAAILAREDVRDAWVSNTFARPEDLPQG 134 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +G+SSLRR+A LL V+D RG + TRL KL+ I+LA AG+KRL + Sbjct: 135 GRVGSSSLRRRAQLLHRLPQTVVLDLRGNVATRLRKLDAGDYDGIVLAAAGLKRLGLLER 194 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ L E P+ GQGAI +E ++ + + L+K +N T V ER L G C Sbjct: 195 IRHYLEPELSLPAVGQGAIGVEIRSDDARTRTLLKPLNDPTTSRCVGAERHMNRLLGGDC 254 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A A G+ L G+V + DG+ G+ A ++G AQ + +++ Sbjct: 255 RLPVAALAEADGTGLRLRGLVASPDGRELLRAEAVGSL--AHSVGEQVAQALLAQGAQHI 312 Query: 305 FN 306 + Sbjct: 313 ID 314 >gi|83945095|ref|ZP_00957461.1| porphobilinogen deaminase [Oceanicaulis alexandrii HTCC2633] gi|83851877|gb|EAP89732.1| porphobilinogen deaminase [Oceanicaulis alexandrii HTCC2633] Length = 320 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 106/266 (39%), Positives = 164/266 (61%), Gaps = 3/266 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVH--KIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR SPLA+A + ++ L H K P + I+ ++T GDRIT+R L GGKGLFT Sbjct: 8 IATRTSPLAMAQTLDVQARLAKAHGEKDPEESFPILGMTTTGDRITDRALLLAGGKGLFT 67 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKDLALH 124 +E+E+ L+ G+ AVHS KD+PT L GL+I+ L RED RD ++ S ++DL Sbjct: 68 KELERALLDGDARFAVHSMKDVPTTLPDGLEIACVLEREDPRDTLLTRDGISRIEDLPQG 127 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT+S+RR++ L R D++++ RG ++TRL KLN+ + A LA AG++RL +E+ Sbjct: 128 ATLGTASIRRQSQALALRPDLNIVLLRGNVDTRLEKLNSGEVDATFLARAGLRRLGREQA 187 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 L + P+P QGA+ IE ++ +A++ ++ +NH T ++ ER FL LDGSC Sbjct: 188 ELPPLELTAVIPAPAQGAVGIEIRSDDVEARKALEPLNHLPTRIAIAAERGFLQALDGSC 247 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG 270 ++ IA A +G+ ++ G L DG Sbjct: 248 RTPIAAHATLEGAEIHLRGEALMPDG 273 >gi|254226598|ref|ZP_04920179.1| porphobilinogen deaminase [Vibrio cholerae V51] gi|125620870|gb|EAZ49223.1| porphobilinogen deaminase [Vibrio cholerae V51] Length = 317 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 112/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVDDQRVRALLTPLNHADTADRVRCERAMNLTL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ +V DG G R A +G A+ + Sbjct: 245 QGGCQVPIGSYALLEGDHIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304 Query: 301 NKNVFN 306 K + Sbjct: 305 AKEILE 310 >gi|78187286|ref|YP_375329.1| porphobilinogen deaminase [Chlorobium luteolum DSM 273] gi|123757188|sp|Q3B2Z5|HEM3_PELLD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78167188|gb|ABB24286.1| Porphobilinogen deaminase [Chlorobium luteolum DSM 273] Length = 313 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 121/280 (43%), Positives = 162/280 (57%), Gaps = 4/280 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK IGTR SPLAL A T++ L P I + + T GD + + L++IG G Sbjct: 2 KKQLIIGTRSSPLALWQAEFTKAEL--SRHFPDLEITLKLVKTTGDVLLDSPLSKIGDMG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT++IEK LI+ EID AVHS KD+PT +GL ISA+ RED RDV IS T L DL Sbjct: 60 LFTKDIEKFLIAKEIDLAVHSLKDVPTATPEGLIISAFTEREDTRDVIISKTGAKLLDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ + TSSLRR + L R D + D RG + TR K + + A++LAYAG+ RL Sbjct: 120 KNAKVATSSLRRMSQLKSLRPDFEICDIRGNLNTRFKKFDEGEFDAMMLAYAGVYRLNFS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EIL E P+ GQGA+ IET V++ + +E+VKV+NH T ERA L L G Sbjct: 180 DRISEILPHEIMLPAVGQGALGIETRVDDEQTREIVKVMNHSTTEYCCKAERALLRHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIF--HEVSRNG 280 C+ I +A K TL+ V ++DG I E+++ G Sbjct: 240 GCQIPIGAYASFKNGTLHLLAFVGSTDGTIGIRDEITKTG 279 >gi|28899762|ref|NP_799367.1| porphobilinogen deaminase [Vibrio parahaemolyticus RIMD 2210633] gi|153838754|ref|ZP_01991421.1| porphobilinogen deaminase [Vibrio parahaemolyticus AQ3810] gi|260365170|ref|ZP_05777735.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus K5030] gi|260878130|ref|ZP_05890485.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AN-5034] gi|260895813|ref|ZP_05904309.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus Peru-466] gi|260900854|ref|ZP_05909249.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AQ4037] gi|32363175|sp|Q87KI9|HEM3_VIBPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|28808014|dbj|BAC61251.1| porphobilinogen deaminase [Vibrio parahaemolyticus RIMD 2210633] gi|149747840|gb|EDM58724.1| porphobilinogen deaminase [Vibrio parahaemolyticus AQ3810] gi|308087192|gb|EFO36887.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus Peru-466] gi|308092784|gb|EFO42479.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AN-5034] gi|308110595|gb|EFO48135.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AQ4037] gi|308111033|gb|EFO48573.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus K5030] Length = 312 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 111/288 (38%), Positives = 165/288 (57%), Gaps = 2/288 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QSTPIRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSNINEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRLK Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I+ + E P+ GQGA+ IE V++ + +L++ +NH+DT D V CERA L+ Sbjct: 181 EDRIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHKDTADRVLCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 G C+ I +A +G ++ +V DG G+R D +G Sbjct: 241 GGCQVPIGSYALLEGDEIWLRALVGEPDGSEIVRGEVRGHRKDGEALG 288 >gi|84625435|ref|YP_452807.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188575118|ref|YP_001912047.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae PXO99A] gi|123752694|sp|Q2NYU4|HEM3_XANOM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238059004|sp|B2SMV3|HEM3_XANOP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|84369375|dbj|BAE70533.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188519570|gb|ACD57515.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 304 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 115/292 (39%), Positives = 172/292 (58%), Gaps = 4/292 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 4 LRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ G+ DCAVHS KD+P +L + A L R D D +S+ SL+ L L + Sbjct: 62 KELELAMLRGDADCAVHSFKDVPMELDDPFVLPAILERGDPADALVSNLYASLQALPLGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL ++ I Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLDERI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC Sbjct: 182 SARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +A A +G L+ G+V ASDG++ H +G+ D ++GR AQ + Sbjct: 242 VPVAALARWEGEGLFLQGMVGSASDGRLIH-ADAHGSADDTEDLGRRVAQGL 292 >gi|153826278|ref|ZP_01978945.1| porphobilinogen deaminase [Vibrio cholerae MZO-2] gi|149739946|gb|EDM54125.1| porphobilinogen deaminase [Vibrio cholerae MZO-2] Length = 311 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 112/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L Sbjct: 179 LESRIRSFIEPEQSLPAVGQGALGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ +V DG G R A +G A+ + Sbjct: 239 QGGCQVPIGSYALLEGDHIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|157960202|ref|YP_001500236.1| porphobilinogen deaminase [Shewanella pealeana ATCC 700345] gi|189028157|sp|A8GZG4|HEM3_SHEPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157845202|gb|ABV85701.1| porphobilinogen deaminase [Shewanella pealeana ATCC 700345] Length = 310 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 113/306 (36%), Positives = 172/306 (56%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H+ + ++P+STKGD I + L ++GG Sbjct: 1 MSQNLIRIATRKSPLAMWQAEFVKAELEKIHE--GLTVELLPMSTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++++D Sbjct: 59 KGLFVKELEVAMLEGLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNTYKTIED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK Sbjct: 119 LPQGAVVGTSSLRRQCQIRAARPDLVIKDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I ++ E P+ GQGA+ IE ++ + + L+ + H +T V ERA L Sbjct: 179 LEERIASFISAEQSLPANGQGAVGIECRTDDARVKALLAPLEHAETRMRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G TL G+V DG S +G+ DA +G A+ + Sbjct: 239 EGGCQVPIGAYAEIDGDTLSLRGLVGNPDGSQIITASSSGSTADAEKLGVALAEELLSKG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKTILD 304 >gi|188990080|ref|YP_001902090.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris str. B100] gi|229846307|sp|B0RNI9|HEM3_XANCB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|167731840|emb|CAP50024.1| hydroxymethylbilane synthase [Xanthomonas campestris pv. campestris] Length = 304 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 111/270 (41%), Positives = 162/270 (60%), Gaps = 3/270 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 4 LRIATRKSPLALWQSEHVATALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ +L+ L L + Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYATLQALPLGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E I Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEARI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ ++ P+P QGA+ +E ++ + +L+ V++ T V ERA L GSC Sbjct: 182 TARLDAPEWLPAPAQGAVAVECRGDDARIHDLLAVLDAGRTRACVEAERAMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFH 274 +A FA +G L+ G+V ASDG++ H Sbjct: 242 VPVAAFARWEGEDLFLQGMVGSASDGRLIH 271 >gi|21232940|ref|NP_638857.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766987|ref|YP_241749.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris str. 8004] gi|23821678|sp|Q8P536|HEM3_XANCP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|81307026|sp|Q4UYZ4|HEM3_XANC8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|21114777|gb|AAM42781.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572319|gb|AAY47729.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris str. 8004] Length = 304 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 111/270 (41%), Positives = 162/270 (60%), Gaps = 3/270 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 4 LRIATRKSPLALWQSEHVATALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ +L+ L L + Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYATLQALPLGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E I Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEARI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ ++ P+P QGA+ +E ++ + +L+ V++ T V ERA L GSC Sbjct: 182 TARLDAPEWLPAPAQGAVAVECRGDDARIHDLLAVLDAGRTRACVEAERAMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFH 274 +A FA +G L+ G+V ASDG++ H Sbjct: 242 VPVAAFARWEGEDLFLQGMVGSASDGRLIH 271 >gi|119357593|ref|YP_912237.1| porphobilinogen deaminase [Chlorobium phaeobacteroides DSM 266] gi|158512603|sp|A1BHD6|HEM3_CHLPD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|119354942|gb|ABL65813.1| porphobilinogen deaminase [Chlorobium phaeobacteroides DSM 266] Length = 313 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 117/280 (41%), Positives = 168/280 (60%), Gaps = 4/280 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG G Sbjct: 2 KKQLIIGTRSSPLALWQAEFTKAEL--SRHYPELDITLKLVKTTGDVLLDSPLSKIGDMG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT++IEK LI+ EID AVHS KD+PT +GL I+++ RED RDV IS + ++L +L Sbjct: 60 LFTKDIEKHLIAKEIDLAVHSLKDVPTSTPEGLIITSFTEREDTRDVIISRSGETLLNLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ I TSSLRR + LL R D + D RG + TR K + + A++LAYAG+ RLK Sbjct: 120 QNARIATSSLRRMSQLLSMRPDFEICDIRGNLNTRFKKFDEGEFDAMMLAYAGVFRLKFS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EIL + P+ GQGA+ IET V++ + +E+V+++NH +T ERA L L G Sbjct: 180 DRISEILPHDVMLPAVGQGALGIETRVDDEQTREIVRILNHSNTEYCCRAERALLRHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKI--FHEVSRNG 280 C+ I +A K TL V + +GKI +E+++ G Sbjct: 240 GCQIPIGAYASFKNGTLKLLAFVGSVNGKIGLRNEITKTG 279 >gi|218550973|ref|YP_002384764.1| porphobilinogen deaminase [Escherichia fergusonii ATCC 35469] gi|226740637|sp|B7LU53|HEM3_ESCF3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|218358514|emb|CAQ91161.1| hydroxymethylbilane synthase [Escherichia fergusonii ATCC 35469] Length = 313 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 113/291 (38%), Positives = 166/291 (57%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDALMAKH--PGLTVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL +L S Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNKYASLDELPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 184 RDALPPEVSLPAVGQGAVGIECRLDDTRTRELLAALNHPETALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A G ++ +V A DG R G+ DA +G A+ + Sbjct: 244 VPIGSYAELIGGEIWLRALVGAPDGSQMIRGERRGSPQDAEKMGISLAEEL 294 >gi|160872858|ref|ZP_02062990.1| porphobilinogen deaminase [Rickettsiella grylli] gi|159121657|gb|EDP46995.1| porphobilinogen deaminase [Rickettsiella grylli] Length = 311 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 126/308 (40%), Positives = 173/308 (56%), Gaps = 5/308 (1%) Query: 1 MEKKPF-RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M KK F RI TR SPLA A ++ L + P I ++P T+GDR ++ +L + G Sbjct: 1 MSKKKFLRIATRKSPLAYWQATSIKNQLEKI--FPFLKITLLPFVTEGDRPSH-SLNQWG 57 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E L+ G+ D AVHS KD+P L KGL + A R D RDV IS + + Sbjct: 58 GKGLFVKELEAALLHGQADIAVHSLKDLPMTLEKGLVLGAICKRCDPRDVLISRSDRLFT 117 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L S +GTSSLRR++ LL R D+ + RG I TRLNKL + AI+LA AG+ RL Sbjct: 118 QLPPGSYVGTSSLRRQSQLLALRPDLKIGVLRGNIGTRLNKLAAGEFDAIILAAAGLIRL 177 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 KK + I E I+ F P+PGQGA+ IE H N+ ++ + + H T V ERA E Sbjct: 178 KKTECISEYFEIDHFLPAPGQGALGIECHENDEESLTYISALIHPITHSCVLAERALSRE 237 Query: 240 LDGSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L G C+ +A +A G + V +SDG +V + G R +A IG AAQ +R Sbjct: 238 LGGGCQVPLAAYAASLGQDFIRLQAFVGSSDGTTQIKVEKQGPRVEAEKIGFLAAQDLRA 297 Query: 299 ISNKNVFN 306 + + + N Sbjct: 298 LGVEEILN 305 >gi|324111028|gb|EGC05015.1| porphobilinogen deaminase [Escherichia fergusonii B253] gi|325499227|gb|EGC97086.1| porphobilinogen deaminase [Escherichia fergusonii ECD227] Length = 313 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 113/291 (38%), Positives = 166/291 (57%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDALMAKH--PGLTVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL +L S Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNKYASLDELPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 184 RDALPPEVSLPAVGQGAVGIECRLDDTRTRELLAALNHPETALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A G ++ +V A DG R G+ DA +G A+ + Sbjct: 244 VPIGSYAELIGGEIWLRALVGAPDGSQMIRGERRGSPQDAEKMGISLAEEL 294 >gi|2495175|sp|Q59684|HEM3_PROMI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|726359|gb|AAC44329.1| porphobilinogen deaminase [Proteus mirabilis] Length = 313 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 112/271 (41%), Positives = 156/271 (57%), Gaps = 2/271 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A + L H P + ++P+ TKGD I + L ++GG Sbjct: 1 MPKSTIRIATRQSPLAMWQALYVKEQLQIAH--PSLVVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+S D AVHS KD+P +GL + RED RD F+S+ SL+ Sbjct: 59 KGLFVKELELALLSSRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYDSLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL+KL+N AI+LA AG+KRLK Sbjct: 119 LPAGSVVGTSSLRRQCQLKALRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ E P+ GQGA+ IE +++ Q L+ +NH DT V ERA L Sbjct: 179 LTERIRSSLSAEQSLPAVGQGAVGIECRLDDHDTQALLAALNHADTATCVKAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 +G C+ I +A + ++ +V A DGK Sbjct: 239 EGGCQVPIGSYAIWQNDKIWLRALVGAPDGK 269 >gi|189346422|ref|YP_001942951.1| porphobilinogen deaminase [Chlorobium limicola DSM 245] gi|238058917|sp|B3EIN1|HEM3_CHLL2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189340569|gb|ACD89972.1| porphobilinogen deaminase [Chlorobium limicola DSM 245] Length = 313 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 118/280 (42%), Positives = 164/280 (58%), Gaps = 4/280 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG G Sbjct: 2 KKQLIIGTRSSPLALWQAEFTKAELS--RHFPELDITLKLVKTTGDVLLDSPLSKIGDMG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT++IEK LI+ EID AVHS KD+PT +GL I+++ RED RDV IS L DL Sbjct: 60 LFTKDIEKHLIAKEIDLAVHSLKDVPTSTPEGLIITSFTEREDTRDVIISKGGAKLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 L++ + TSSLRR + L R D + D RG + TR K + + A++LAYAG+ RL Sbjct: 120 LNAKVATSSLRRMSQLKSLRPDFEICDIRGNLNTRFKKFDEGEFDAMMLAYAGVFRLNFS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EIL E P+ GQGA+ IET V++ + +E+V+++NH +T ERA L L G Sbjct: 180 DRISEILPHEIMLPAVGQGALGIETRVDDEQTREIVRILNHSNTEYCCKAERALLRHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNG 280 C+ I +A K TL V + DG I +E++R+G Sbjct: 240 GCQIPIGAYASFKNGTLKLLAFVGSVDGTVGINNEITRSG 279 >gi|116750623|ref|YP_847310.1| porphobilinogen deaminase [Syntrophobacter fumaroxidans MPOB] gi|158512355|sp|A0LN73|HEM3_SYNFM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|116699687|gb|ABK18875.1| hydroxymethylbilane synthase [Syntrophobacter fumaroxidans MPOB] Length = 309 Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 113/296 (38%), Positives = 169/296 (57%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RIGTR S LAL + ++++ + P + + + T GD+I + L ++GG Sbjct: 1 MTDRVIRIGTRGSMLALKQSGNVKAAMEALW--PGLRVELQVVRTTGDKILDVPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE L++ +D AVHS KD+P L +GL+I A RED RDV ++ T + + D Sbjct: 59 KGLFVKEIEDALLARTVDLAVHSMKDVPAILPEGLEIGAIPKREDPRDVIVTRTGKGIAD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR + + + R DI + + RG IETRL KL AI+LA AG+ R+ Sbjct: 119 LPMGGRVGTSSLRRASQIRKLRPDIEIANLRGNIETRLRKLTEGAFDAIILAAAGLHRMG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + L+ DF P+ GQGAI IE ++ + +EL+ ++ DT +V ER+ L L Sbjct: 179 WQNRVTSYLDPADFLPAIGQGAIGIELRCDDGEVRELLAPLHDPDTHVAVEAERSLLRTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ I G A+ TL G+V + DG+ SR G+ A IGRD + Sbjct: 239 EGGCQVPIGGHAHLVDGTLTLSGMVASIDGEELFRASRAGSPAQARKIGRDVGMEL 294 >gi|325922553|ref|ZP_08184310.1| hydroxymethylbilane synthase [Xanthomonas gardneri ATCC 19865] gi|325546966|gb|EGD18063.1| hydroxymethylbilane synthase [Xanthomonas gardneri ATCC 19865] Length = 304 Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 114/292 (39%), Positives = 172/292 (58%), Gaps = 4/292 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 4 LRIATRKSPLALWQSEHVATALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ GE DCAVHS KD+P +L + A + R D D +S+ +++ L L + Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDAPFVLPAIMERGDAADALVSNLYATVQALPLGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL + I Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGFDARI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L++ ++ P+P QGA+ +E ++ L+ V++ T V ERA L GSC Sbjct: 182 TARLDVPEWLPAPAQGAVAVECRGDDAHIHGLLAVLDAGRTRACVEAERAMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +A FA +G L+ G+V ASDG++ H +G+ D ++GR AQ + Sbjct: 242 VPVAAFARWEGDGLFLQGMVGSASDGRLIH-AEAHGSAEDTESLGRLVAQGL 292 >gi|307293495|ref|ZP_07573339.1| porphobilinogen deaminase [Sphingobium chlorophenolicum L-1] gi|306879646|gb|EFN10863.1| porphobilinogen deaminase [Sphingobium chlorophenolicum L-1] Length = 308 Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 116/268 (43%), Positives = 155/268 (57%), Gaps = 3/268 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P R+GTR SPLALA A T ++L H + I+ + T GDRI +R L EIGGK L Sbjct: 6 RPLRLGTRGSPLALAQAHMTIAALRARHGWDEGAVEIVVVQTSGDRIQDRALAEIGGKAL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +T+E+++ L+ GEID AVHS KD+ T ++I+A LPR D+RD + A S L Sbjct: 66 WTKELDRALLEGEIDFAVHSMKDVETIRPAEIRIAAMLPRADVRDRLVG--AASFDALPE 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 V+GTSS RR A + R R D V+ FRG + TRL KL +AHA LLA AG+ RL + Sbjct: 124 KPVVGTSSPRRAAQVKRLRPDAGVVLFRGNVATRLAKLEKGEAHATLLAAAGLDRLGQSD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V I E P+P QGA+ IET N +L+ IN DT+D V ERA L L G+ Sbjct: 184 VGVAI-PAEVMLPAPSQGAVGIETLSGNGAMLDLLATINDADTFDCVMAERAVLVGLGGT 242 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271 C S IA + +Y +++ DG+ Sbjct: 243 CHSPIAALGRLEEGRIYLRAEIISPDGQ 270 >gi|261250035|ref|ZP_05942612.1| porphobilinogen deaminase [Vibrio orientalis CIP 102891] gi|260939539|gb|EEX95524.1| porphobilinogen deaminase [Vibrio orientalis CIP 102891] Length = 312 Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 109/305 (35%), Positives = 172/305 (56%), Gaps = 2/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QSTPIRIATRKSPLALWQAHFVKDALKAAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHNIDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +++GT SLRR+ L +R D+ + + RG + TRL KL++ + AI+LA AG+KRL+ Sbjct: 121 PQGAIVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDDGQYDAIILAAAGLKRLEL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ IK + E P+ GQGA+ IE +++ + +L++ +NH++T D V CERA L+ Sbjct: 181 EERIKSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKETADRVLCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I ++ G ++ +V DG G+R DA +G + A + Sbjct: 241 GGCQVPIGSYSLIDGDNIWLRALVGEPDGSKIIRGEIRGSRADAETLGVELANQLLDDGA 300 Query: 302 KNVFN 306 K + Sbjct: 301 KEILT 305 >gi|119776386|ref|YP_929126.1| porphobilinogen deaminase [Shewanella amazonensis SB2B] gi|119768886|gb|ABM01457.1| Hydroxymethylbilane synthase [Shewanella amazonensis SB2B] Length = 326 Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 115/306 (37%), Positives = 172/306 (56%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG Sbjct: 17 MSQNLIRIATRKSPLAMWQAEFVKAELERIH--PDLTVELLPMSTKGDVILDTPLAKVGG 74 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T +S+ + Sbjct: 75 KGLFVKELEVAMLEGRADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNTYKSIDE 134 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + D RG + TRL KL++ + AI+LA AG+ RLK Sbjct: 135 LPQGAVVGTSSLRRQCQLRARRPDLIIKDLRGNVGTRLAKLDSGEYDAIILAAAGLIRLK 194 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++ E+ P+ GQGA+ IE N+ + + L+ + H++T V ERA L Sbjct: 195 LAERIAGFISTEESLPANGQGAVGIECRTNDERVKALLAPLEHKETRLRVLAERAMNTRL 254 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA + TL G+V DG S G+ DAI +G A + Sbjct: 255 EGGCQVPIGAFAEIEADTLTLRGLVGNPDGSEVITGSVTGSTADAIALGHQLADDLLSRG 314 Query: 301 NKNVFN 306 K + + Sbjct: 315 AKTILD 320 >gi|189499889|ref|YP_001959359.1| porphobilinogen deaminase [Chlorobium phaeobacteroides BS1] gi|238058915|sp|B3EPK0|HEM3_CHLPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189495330|gb|ACE03878.1| porphobilinogen deaminase [Chlorobium phaeobacteroides BS1] Length = 313 Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 121/278 (43%), Positives = 163/278 (58%), Gaps = 4/278 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK IGTR SPLAL A T++ L P I + + T GD + + L++IG G Sbjct: 2 KKKLIIGTRSSPLALWQADFTQAEL--SKHFPDLEIELKLVKTTGDVLLDSPLSKIGDMG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT++IEK LISGEID AVHS KD+PT+ +GL +SA+ RED RDV IS +SLK L Sbjct: 60 LFTKDIEKHLISGEIDLAVHSLKDVPTETPEGLMLSAFTEREDTRDVIISKNGESLKTLK 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + I TSSLRR + LL R D + D RG + TR K + + A++LAYAG+ RL Sbjct: 120 QDAKIATSSLRRTSQLLSMRPDFQMGDIRGNLNTRFKKFDESDFDAMMLAYAGVHRLNFG 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EIL E P+ GQGA+ IET V++ +E+V V+N+ +T ERA L L G Sbjct: 180 DRISEILPHEVMLPAVGQGALGIETRVDDEATKEIVSVMNNVNTEFCTKAERALLRHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSR 278 C+ I +A K L+ V + DGK I +E+++ Sbjct: 240 GCQIPIGSYASLKNGNLHLLAYVGSVDGKRTIRNEITK 277 >gi|325291200|ref|YP_004267381.1| hydroxymethylbilane synthase [Syntrophobotulus glycolicus DSM 8271] gi|324966601|gb|ADY57380.1| hydroxymethylbilane synthase [Syntrophobotulus glycolicus DSM 8271] Length = 305 Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 121/303 (39%), Positives = 175/303 (57%), Gaps = 5/303 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LA+ A + SL ++ P + V++P TKGD+I + L +IG KG Sbjct: 2 KTIRIGTRESKLAIWQAEWVKDSLTSIY--PGIDCVLVPKKTKGDKIPDIPLPKIGDKGF 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FTEE+E+ L++GEID AVHS KD+P +L +GL I+AY R D RDVF L +L Sbjct: 60 FTEELEQALLTGEIDLAVHSLKDLPVELPQGLSIAAYGERHDPRDVFFGKEGLPLAELPA 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA-ILLAYAGIKRLKKE 182 S+IGTSSLRR+ L R+D++ D RG ++TR +KL N++ A I+LA AG RL + Sbjct: 120 GSMIGTSSLRRQCQLKYQRADLNFCDLRGNLDTRWDKLQNSRDMAGIVLAAAGALRLGWQ 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E L + P+ GQG I IET + + +++++ +NH + + ER+FL L G Sbjct: 180 DRITEFLAEDVVLPAVGQGIIAIETASHRTEIRQILQPLNHRPSELAGRAERSFLRSLGG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C++ IA A + + G+V DGK +V+ G D G DAA I+ + Sbjct: 240 GCQTPIAALAKVQEDRIQVTGMVAGMDGKNILKVTAEG--FDPEQTGADAAAQIKCLGAN 297 Query: 303 NVF 305 N+ Sbjct: 298 NLL 300 >gi|118581775|ref|YP_903025.1| porphobilinogen deaminase [Pelobacter propionicus DSM 2379] gi|158512569|sp|A1AUE7|HEM3_PELPD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|118504485|gb|ABL00968.1| porphobilinogen deaminase [Pelobacter propionicus DSM 2379] Length = 310 Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 112/286 (39%), Positives = 164/286 (57%), Gaps = 5/286 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RIGTR S LAL A +S L + P + + + T GDRI + L ++GG Sbjct: 1 MPPRQLRIGTRASQLALWQANWVKSELE--KRYPAMEVTLTKIKTMGDRILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD +S A+ Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVVSRAAR-FSH 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTS+LRR+A LL R D+ ++ RG +ETR+ KL+ A++LA AG+KRL Sbjct: 118 LPPGARVGTSALRRQAQLLHARPDLEMVTIRGNVETRIRKLDEENLDAVILAAAGLKRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + E L++E P+ GQGA+ IE +++P E + NH DT +V ERA L Sbjct: 178 LTQRVAEYLDVEFSIPAIGQGALGIECRLSDPVVTEAIAFFNHPDTSHAVRAERALLRRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF--HEVSRNGNRCD 284 G C+ IA +G L G++ A DG+ F E+S ++C+ Sbjct: 238 QGGCQVPIAAHGTIRGGELRLVGLIAAVDGREFVRDEISGPVDQCE 283 >gi|77920653|ref|YP_358468.1| porphobilinogen deaminase [Pelobacter carbinolicus DSM 2380] gi|123756552|sp|Q3A009|HEM3_PELCD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|77546736|gb|ABA90298.1| hydroxymethylbilane synthase [Pelobacter carbinolicus DSM 2380] Length = 315 Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 110/270 (40%), Positives = 158/270 (58%), Gaps = 2/270 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR S LAL A + L +H P ++V++P++TKGD+I + L ++GG Sbjct: 1 MSSSALRIGTRASRLALWQAEWVQQQLETLH--PGLSVVLVPITTKGDKILDVPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L G ID AVHS KD+P+ L GL + PRED RD ++ +S Sbjct: 59 KGLFVKEIEEALYDGSIDLAVHSMKDVPSVLPPGLILPCIPPREDPRDALVTPDGRSFAQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A LL R D+ ++ RG +ETRL K+ I+LA AG+KRL+ Sbjct: 119 LPQGARIGTSALRRQAQLLHRRPDLDIVSLRGNVETRLRKMEEEDMDGIVLAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I E L+++ P+ GQGA+ +E + + EL+ ++ DT +V ERAFL L Sbjct: 179 LAERIAEYLSVDVSLPAIGQGALGLECREGDDRTLELIAPLHDADTAVAVRAERAFLRRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 +G C+ +A A TL G+V DG Sbjct: 239 NGGCQVPLAAHATVAEQTLTMVGLVAEVDG 268 >gi|317494824|ref|ZP_07953235.1| porphobilinogen deaminase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917149|gb|EFV38497.1| porphobilinogen deaminase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 323 Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 113/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A+ R L P + ++P+ T+GD + + L ++GGKGLF Sbjct: 16 LRIATRQSPLALWQAYYVRDHLQ--AHWPDLTVELVPMVTRGDVLLDTPLAKVGGKGLFV 73 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P +GL + RED RD F+S L+DL S Sbjct: 74 KELELALLDGRADIAVHSMKDVPVAFPEGLGLVTICEREDPRDAFVSPKYARLEDLPEGS 133 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ V D RG + TRL KL+N AI+LA AG+KRL+ E+ I Sbjct: 134 IVGTSSLRRQCQLREIRPDLIVRDLRGNVGTRLAKLDNGDYDAIILAAAGLKRLELEERI 193 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +N+ + Q L+ +N DT V+ ERA L+G C+ Sbjct: 194 RYALPPEQSLPAVGQGAVGIECRLNDTRTQALLAPLNDIDTATRVSAERAMNTRLEGGCQ 253 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I ++ G ++ +V DG + R G R A +G A+ + Sbjct: 254 VPIGSYSELNGDEIWLRALVGKPDGTLIIRGERRGPRAKAAELGVSLAEEL 304 >gi|227357162|ref|ZP_03841531.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Proteus mirabilis ATCC 29906] gi|227162694|gb|EEI47661.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Proteus mirabilis ATCC 29906] Length = 313 Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 111/273 (40%), Positives = 156/273 (57%), Gaps = 2/273 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A + L H P + ++P+ TKGD I + L ++GG Sbjct: 1 MPKSTIRIATRQSPLAMWQALYVKEQLQIAH--PSLVVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+S D AVHS KD+P +GL + RED RD F+S+ SL+ Sbjct: 59 KGLFVKELELALLSSRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYDSLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL+KL+N AI+LA AG+KRLK Sbjct: 119 LPAGSVVGTSSLRRQCQLKALRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ E P+ GQGA+ IE +++ Q L+ +NH DT V ERA L Sbjct: 179 LTERIRSSLSAEQSLPAVGQGAVGIECRLDDHDTQALLAALNHADTATCVKAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +G C+ I +A + ++ +V + DGK Sbjct: 239 EGGCQVPIGSYAIWQNDKIWLRALVGSPDGKTI 271 >gi|149191476|ref|ZP_01869725.1| porphobilinogen deaminase [Vibrio shilonii AK1] gi|148834664|gb|EDL51652.1| porphobilinogen deaminase [Vibrio shilonii AK1] Length = 329 Score = 202 bits (513), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 109/295 (36%), Positives = 168/295 (56%), Gaps = 2/295 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +P RI TR SPLAL A + +L+ H P + ++ + TKGD I + L ++GGK Sbjct: 20 QTQPIRIATRKSPLALWQAHYVKDALIAAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 77 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L Sbjct: 78 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYTNISEL 137 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ L R D+ + + RG + TRL KL+N + AI+LA AG+KRL+ Sbjct: 138 PQGAVVGTCSLRRQCQLKEQRPDLVIKELRGNVGTRLGKLDNGEYDAIILAAAGLKRLEL 197 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I+ + E+ P+ GQGA+ IE +++ + +L++ +NH +T D V CERA L+ Sbjct: 198 ESRIRSFIEPEESLPAVGQGAVGIECRLDDERLIKLLEPLNHTNTADRVLCERAMNLTLE 257 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 G C+ I ++ G ++ +V DG G R DA +G A + Sbjct: 258 GGCQVPIGSYSLIDGDEIWLRALVGEPDGSKIVRGEIRGKRADAEALGVQLANQL 312 >gi|294010302|ref|YP_003543762.1| hydroxymethylbilane synthase [Sphingobium japonicum UT26S] gi|292673632|dbj|BAI95150.1| hydroxymethylbilane synthase [Sphingobium japonicum UT26S] Length = 308 Score = 202 bits (513), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 121/295 (41%), Positives = 170/295 (57%), Gaps = 8/295 (2%) Query: 1 MEK--KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M+K +P R+GTR SPLALA A T ++L H + I+ + T GDRI +R L +I Sbjct: 1 MQKPSRPLRLGTRGSPLALAQAHMTVAALRARHGWDEGAVEIVVVQTSGDRIQDRALADI 60 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGK L+T+E+++ L SGEID AVHS KD+ T ++I+A LPR D+RD + A Sbjct: 61 GGKALWTKELDRALASGEIDFAVHSMKDVETIRPAEIRIAAMLPRADVRDRLVG--ADDF 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L V+GTSS RR A + R R D V+ FRG + TRL +L+ +AHA LLA AG+ R Sbjct: 119 AALPERPVVGTSSPRRAAQVRRLRPDAQVVLFRGNVATRLARLDRGEAHATLLAAAGLDR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + V I ++ P+P QGA+ IET + +L+ I+ DT+D V ERA LA Sbjct: 179 LGQGDVGVAI-PVDVMLPAPSQGAVGIETLSGDEAMLDLLAAISDADTFDCVMAERAVLA 237 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK-IFHEVSR--NGNRCDAINIGR 290 L G+C S IA FA + + +++ DG+ E +R G+ A +GR Sbjct: 238 GLGGTCHSPIAAFARLEDGQVRLRAEIISPDGRETVGETARIERGDAAAAEAMGR 292 >gi|56964395|ref|YP_176126.1| porphobilinogen deaminase [Bacillus clausii KSM-K16] gi|61213279|sp|Q5WEP5|HEM3_BACSK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|56910638|dbj|BAD65165.1| porphobilinogen deaminase [Bacillus clausii KSM-K16] Length = 311 Score = 202 bits (513), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 117/282 (41%), Positives = 168/282 (59%), Gaps = 4/282 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LAL L + P+ + + TKGDRI + TL+++GGKGLF +E Sbjct: 6 IGTRRSKLALTQTNWVIDQLKQLG--VPYEFEVKEIVTKGDRILDVTLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE L SGEID AVHS KD+P++LL+ ++A RED RDV +S +L +L +++ Sbjct: 64 IEAALRSGEIDVAVHSMKDVPSELLEEFTLAAITEREDPRDVLVSENGHTLDELPAGAIV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L R D+ V RG +ETRL KL AI+LA AG+KRL E VI Sbjct: 124 GTSSLRRSAQILHRRPDVQVKWIRGNVETRLRKLKEEDFSAIVLAAAGLKRLGYGEDVIT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E L+ + P+ GQGA+ +E V++ + EL+ ++HE+T +V ERAFL E++G C+ Sbjct: 184 EYLDKDVCLPAIGQGALGLECRVDDVETTELLAKLHHEETGKAVLAERAFLKEMNGGCQV 243 Query: 247 AIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 I G+A + ++ G+V + DGK + + G D + Sbjct: 244 PIGGYATVLEDGAVFLTGLVGSPDGKTILKEGKCGMVADELG 285 >gi|271502386|ref|YP_003335412.1| porphobilinogen deaminase [Dickeya dadantii Ech586] gi|270345941|gb|ACZ78706.1| porphobilinogen deaminase [Dickeya dadantii Ech586] Length = 312 Score = 202 bits (513), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 112/284 (39%), Positives = 161/284 (56%), Gaps = 2/284 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L H P + ++P+ T+GD + + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHFVQQRLEACH--PGLRVELVPMVTRGDVLLDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + R+D RD F+S+ +L DL + Sbjct: 64 KELELALLENRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNNYATLDDLPEGA 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+ L R D+ V D RG + TRL+KL+N AI+LA AG+KRL E I Sbjct: 124 CVGTSSLRRQCQLRAHRPDLVVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLGLENRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L+ E P+ GQGA+ +E +++ + + L+ +NH+DT V ERA L+G C+ Sbjct: 184 RTALSPEQSLPAVGQGAVGVECRLDDARTRALLAPLNHDDTATRVLAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 I +A + TLY +V A DG R G R DA +G Sbjct: 244 VPIGSYAELQDDTLYLRALVGAPDGSRIIYAERRGPRQDAEALG 287 >gi|58583630|ref|YP_202646.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae KACC10331] gi|75433978|sp|Q5GVL2|HEM3_XANOR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|58428224|gb|AAW77261.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 304 Score = 201 bits (512), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 114/292 (39%), Positives = 171/292 (58%), Gaps = 4/292 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IG KGLF Sbjct: 4 LRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGDKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ G+ DCAVHS KD+P +L + A L R D D +S+ SL+ L L + Sbjct: 62 KELELAMLRGDADCAVHSFKDVPMELDDPFVLPAILERGDPADALVSNLYASLQALPLGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL ++ I Sbjct: 122 RVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLDERI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC Sbjct: 182 SARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +A A +G L+ G+V ASDG++ H +G+ D ++GR AQ + Sbjct: 242 VPVAALARWEGEGLFLQGMVGSASDGRLIH-ADAHGSADDTQDLGRRVAQGL 292 >gi|51594540|ref|YP_068731.1| porphobilinogen deaminase [Yersinia pseudotuberculosis IP 32953] gi|186893538|ref|YP_001870650.1| porphobilinogen deaminase [Yersinia pseudotuberculosis PB1/+] gi|61213379|sp|Q66G00|HEM3_YERPS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238059007|sp|B2K065|HEM3_YERPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|51587822|emb|CAH19424.1| porphobilinogen deaminase [Yersinia pseudotuberculosis IP 32953] gi|186696564|gb|ACC87193.1| porphobilinogen deaminase [Yersinia pseudotuberculosis PB1/+] Length = 313 Score = 201 bits (512), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 117/289 (40%), Positives = 161/289 (55%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + A RED RD F+S L D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVAICEREDPRDAFVSSHYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L Sbjct: 179 LETRIRYAMSAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I +A +G TL+ +V A DG R G +A +G Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMG 287 >gi|312963804|ref|ZP_07778275.1| Porphobilinogen deaminase [Pseudomonas fluorescens WH6] gi|311281839|gb|EFQ60449.1| Porphobilinogen deaminase [Pseudomonas fluorescens WH6] Length = 313 Score = 201 bits (512), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 113/296 (38%), Positives = 167/296 (56%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLELAH--PGLKVSLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL + Sbjct: 59 KGLFVKELETALLENEADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTYTSLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPPGSIVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I +++ED P+ GQGA+ IE + + L+K ++H DT V ERA L Sbjct: 179 FEDRITSAISVEDSLPAGGQGAVGIECRTADSEIHALLKPLDHHDTEVRVTAERALNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IA +A +G ++ G+V DG G + DA +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDNIWLRGLVGDPDGGTLLTAQARGPQADATALGIQVAEEL 294 >gi|170769870|ref|ZP_02904323.1| porphobilinogen deaminase [Escherichia albertii TW07627] gi|170121308|gb|EDS90239.1| porphobilinogen deaminase [Escherichia albertii TW07627] Length = 313 Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 114/291 (39%), Positives = 163/291 (56%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMTSH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL L S Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDALPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +N+ + +EL+ +NH +T V ERA L+G C+ Sbjct: 184 RTALPPEVSLPAVGQGAVGIECRLNDTRTRELLAALNHNETALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G+ DA +G A+ + Sbjct: 244 VPIGSYAELVDGEIWLRALVGAPDGSQIIRGERRGSPQDAEQMGISLAEEL 294 >gi|149908497|ref|ZP_01897159.1| porphobilinogen deaminase [Moritella sp. PE36] gi|149808331|gb|EDM68268.1| porphobilinogen deaminase [Moritella sp. PE36] Length = 312 Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H+ + +IP+ TKGD I + L ++GG Sbjct: 1 MATETLRIATRKSPLAMWQAEYVKARLEAIHQ--NLTVELIPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P + +GL + RED RD F+S+T + +++ Sbjct: 59 KGLFVKELEVAILENRADIAVHSMKDVPVEFPEGLDLEVICEREDPRDAFVSNTYRQIEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ ++D RG + TRLNKL+N AI+LA AG+KRL Sbjct: 119 LPPGAIVGTCSLRRQCQLSEARPDLKIMDLRGNVNTRLNKLDNKDYDAIILAAAGLKRLD 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I + E P+ GQGA+ IE +++ + + L+ +NH T D V ERA L Sbjct: 179 MEYRIASYIEPEQSLPAVGQGAVGIECRIDDERVKALLAPLNHALTSDRVLAERAMNLAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G L+ G+V DG G+R +A +G + A + Sbjct: 239 EGGCQVPIGSYAIIDGDELWLRGLVGKPDGTEVIRAEIRGDRKNARQLGLELADKLLAQG 298 Query: 301 NKNVF 305 K + Sbjct: 299 AKEIL 303 >gi|307132975|ref|YP_003884991.1| hydroxymethylbilane synthase [Dickeya dadantii 3937] gi|306530504|gb|ADN00435.1| hydroxymethylbilane synthase [Dickeya dadantii 3937] Length = 313 Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 113/285 (39%), Positives = 164/285 (57%), Gaps = 3/285 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L H P + ++P+ T+GD + + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHFVQQRLKACH--PGLRVELVPMVTRGDVLLDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + R+D RD F+S+ SL DL + + Sbjct: 64 KELELALLENRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYDSLDDLPVGA 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+ L R D++V D RG + TRL+KL+N AI+LA AG+KRL E I Sbjct: 124 CVGTSSLRRQCQLRAHRPDLTVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLGLEDRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L+ E P+ GQGA+ +E +++ + + L+ +NH+DT V ERA L+G C+ Sbjct: 184 RTALSPEQSLPAVGQGAVGVECRLDDARTRALLAPLNHDDTATRVLAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 I +A + G TL+ +V A DG R G R DA +G Sbjct: 244 VPIGSYAELQDGDTLWLRALVGAPDGSRIIYAERRGLRQDAEQLG 288 >gi|197287145|ref|YP_002153017.1| porphobilinogen deaminase [Proteus mirabilis HI4320] gi|238058999|sp|B4F1X3|HEM3_PROMH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|194684632|emb|CAR46538.1| porphobilinogen deaminase [Proteus mirabilis HI4320] Length = 313 Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 110/273 (40%), Positives = 156/273 (57%), Gaps = 2/273 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A + L H P + ++P+ TKGD I + L ++GG Sbjct: 1 MSKSTIRIATRQSPLAMWQALYVKEQLQIAH--PSLVVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+S D AVHS KD+P +GL + RED RD F+S+ SL+ Sbjct: 59 KGLFVKELELALLSSRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYDSLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL+KL+N AI+LA AG+KRLK Sbjct: 119 LPAGSVVGTSSLRRQCQLKALRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ E P+ GQGA+ IE +++ Q L+ +NH DT V ERA L Sbjct: 179 LTERIRSSLSAEQSLPAVGQGAVGIECRLDDHDTQALLAALNHADTATCVKAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +G C+ I +A + ++ +V + DG+ Sbjct: 239 EGGCQVPIGSYAIWQNGKIWLRALVGSPDGETI 271 >gi|162419364|ref|YP_001605129.1| porphobilinogen deaminase [Yersinia pestis Angola] gi|238059008|sp|A9R8K0|HEM3_YERPG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|162352179|gb|ABX86127.1| porphobilinogen deaminase [Yersinia pestis Angola] Length = 313 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 117/305 (38%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L Sbjct: 179 LENRIRYAMSAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G TL+ +V A DG R G +A +G + A + + Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELADELLSLG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|157368427|ref|YP_001476416.1| porphobilinogen deaminase [Serratia proteamaculans 568] gi|167008819|sp|A8G848|HEM3_SERP5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157320191|gb|ABV39288.1| porphobilinogen deaminase [Serratia proteamaculans 568] Length = 313 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 117/296 (39%), Positives = 164/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQQRLMANH--PGLQVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P GL + R+D RD F+S+ SL Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPVDFPAGLGLVTICERDDPRDAFVSNRFTSLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ V D RG + TRL+KL+N AI+LA AG+KRL Sbjct: 119 LPQGSVVGTSSLRRQCQLRERRPDLIVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ L+ E+ P+ GQGA+ IE +++ + L+ +NH T V ERA L Sbjct: 179 LEQRIRSPLSPEECLPAVGQGAVGIECRLDDETTRALLAPLNHAVTETRVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ I +A G +L+ +V + DG R G A +G + A+ + Sbjct: 239 EGGCQVPIGSYAELDGDSLWLRALVGSPDGSQMVRGERRGPAALAEQMGIELAEEL 294 >gi|195953610|ref|YP_002121900.1| porphobilinogen deaminase [Hydrogenobaculum sp. Y04AAS1] gi|195933222|gb|ACG57922.1| porphobilinogen deaminase [Hydrogenobaculum sp. Y04AAS1] Length = 285 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 115/289 (39%), Positives = 171/289 (59%), Gaps = 9/289 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LAL A +S L + I ++ ++T GD+I + L++IGGKGLF Sbjct: 3 LRLGTRKSKLALWQANFVKSKLEALG----LEIELVLITTTGDKILDTPLSKIGGKGLFV 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L+ EID AVHS KD+P + +GL + +L RED +D F+S + ++L +L ++ Sbjct: 59 KEIENALMEDEIDFAVHSLKDVPAFIPQGLVVDVFLEREDPKDAFVSKSYKTLNELPPNA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS+RRK LL+ R D+++ D RG ++TRL KL + AI+LA AG+KRL E VI Sbjct: 119 KIGTSSIRRKVQLLQRRKDLTIEDLRGNVDTRLKKLEDGLYDAIILASAGLKRLGFEGVI 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L DF P+ GQG + IE +N + ++K INHE T+ ER+FL ++GSC+ Sbjct: 179 SSYL---DFIPAVGQGIVAIEYKASNKELSNILKQINHEPTYICALAERSFLETVEGSCQ 235 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 + A + G + DG + E++ G D I +G+D A+ Sbjct: 236 IPMGAHATLAQDLIKIRGFIANEDGTNYRELTLEGK--DPIGLGKDLAK 282 >gi|145220050|ref|YP_001130759.1| porphobilinogen deaminase [Prosthecochloris vibrioformis DSM 265] gi|189028096|sp|A4SFJ8|HEM3_PROVI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|145206214|gb|ABP37257.1| porphobilinogen deaminase [Chlorobium phaeovibrioides DSM 265] Length = 313 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 118/280 (42%), Positives = 163/280 (58%), Gaps = 4/280 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG G Sbjct: 2 KKQLIIGTRSSPLALWQAEYTKAEL--SRHFPDLDITLKLVKTTGDVLLDSPLSKIGDMG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT++IEK LI+ EID AVHS KD+PT +GL ISA+ RED RDV IS + DL Sbjct: 60 LFTKDIEKFLIAKEIDLAVHSLKDVPTATPEGLIISAFTEREDTRDVIISKNGVKMLDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ + TSSLRR + L R D + D RG + TR K + + A++LAYAG+ RL Sbjct: 120 KNAKVATSSLRRMSQLKSLRPDFDIKDIRGNLNTRFQKFDEGEFDAMMLAYAGVYRLNFS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EIL E P+ GQGA+ IET V++ + +E+VKV+NH +T ER+ L L G Sbjct: 180 DRISEILPHEIMLPAVGQGALGIETRVDDEQTREIVKVMNHSNTEYCCKAERSLLRHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNG 280 C+ I +A K TL+ V + DG I +E+++ G Sbjct: 240 GCQIPIGSYASFKNGTLHLLAFVGSVDGTKGIRNEITKTG 279 >gi|225850000|ref|YP_002730234.1| porphobilinogen deaminase [Persephonella marina EX-H1] gi|225645034|gb|ACO03220.1| porphobilinogen deaminase [Persephonella marina EX-H1] Length = 308 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 115/301 (38%), Positives = 169/301 (56%), Gaps = 2/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A L P + ++ + TKGD+I + L ++GGKGLF Sbjct: 3 IRIGTRKSKLALWQANYIADQLK--KHFPDLEVELVKIVTKGDKILDVPLAKVGGKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ ++ EID AVHS KD+PT +GL + A RED RD F+S S++D+ + Sbjct: 61 KEIEEAMLRNEIDIAVHSLKDVPTYFPEGLGLVAITEREDPRDAFLSVKYNSIEDMPEGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRRKA ++ R DI + D RG ++TR+ KL + I+LAYAG+KRL E + Sbjct: 121 VLGTSSLRRKAQIMMKRKDIRIEDLRGNVDTRIRKLEEGQYDGIILAYAGLKRLGLEGKV 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++IL + P+ QG + IE +++ K +E+V V+NH ++ ERAFL L+G C+ Sbjct: 181 RQILQPDYMIPAVAQGFLGIEARLDDEKTREIVSVLNHRESEIRAKAERAFLKTLEGGCQ 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +AG++ L G V G S G+ DA ++G A+ + K V Sbjct: 241 VPLAGYSEIVNGKLKITGFVSDLTGDRVFRDSMEGSLEDAESLGVKLAEKLLSDGAKEVL 300 Query: 306 N 306 Sbjct: 301 E 301 >gi|312884198|ref|ZP_07743909.1| porphobilinogen deaminase [Vibrio caribbenthicus ATCC BAA-2122] gi|309368126|gb|EFP95667.1| porphobilinogen deaminase [Vibrio caribbenthicus ATCC BAA-2122] Length = 312 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 111/292 (38%), Positives = 164/292 (56%), Gaps = 2/292 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RI TR SPLAL A + +L+ H P + +I + TKGD I + L ++GGKGLF Sbjct: 6 PIRIATRKSPLALWQANYVKEALIKAH--PGLQVELITMVTKGDIILDTPLAKVGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ G D AVHS KD+P KGL + RED RD F+S+ Q++ L + Sbjct: 64 VKELENAMLEGRADLAVHSMKDVPVDFPKGLGLVTICEREDPRDAFVSNHYQNIDALPNN 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +++GT SLRR+ + +R D+ V + RG + TRLNKL+ + AI+LA AG+KRL E Sbjct: 124 AIVGTCSLRRQCQIKEYRPDLIVKELRGNVGTRLNKLDAGEYDAIILAAAGLKRLGLESR 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L E P+ GQGA+ IE +++ + +L+ +N DT D V CERA L+G C Sbjct: 184 IASFLEPEQSLPAVGQGAVGIECRLDDQRLIDLLAPLNDRDTNDRVKCERAMNLTLEGGC 243 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + I ++ +G ++ +V DG G R DA +G + A + Sbjct: 244 QVPIGSYSVLEGEQIWLRALVGEPDGSQMVRGEIRGKRDDAEQLGIELANQL 295 >gi|78484457|ref|YP_390382.1| porphobilinogen deaminase [Thiomicrospira crunogena XCL-2] gi|123728099|sp|Q31JG5|HEM3_THICR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78362743|gb|ABB40708.1| hydroxymethylbilane synthase [Thiomicrospira crunogena XCL-2] Length = 309 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 114/294 (38%), Positives = 171/294 (58%), Gaps = 2/294 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK RI TR SPLA+ A ++ L H+ + ++P+STKGD+I + L +IGGKG Sbjct: 2 KKTLRIATRKSPLAMWQAEFVKAELEKHHE--GLTVELLPMSTKGDKILDVPLAKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E ++++GE D AVHS KD+P L +G + A L R + D F+S+ ++L Sbjct: 60 LFTKELEDRMLAGEADIAVHSMKDVPMVLPEGFALGAILERHEPTDAFVSNDYAHFEELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRRKA L+ R D+ V D RG + TRL KL+ AI+LA +G+KRL+ + Sbjct: 120 QGAVLGTSSLRRKAQLMAARPDLVVKDLRGNVGTRLGKLDAGDYDAIVLATSGLKRLELD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ L+ E P+ QG + IE +P+ EL++V+NH DT ERA L+G Sbjct: 180 ERIRHELSPETCLPAVSQGTLGIEYFEKDPEVLELIQVLNHRDTEIRTLAERAMNHRLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ I +A + +Y G+V A DG G++ D +G A+ + Sbjct: 240 GCQVPIGVYAELEDDQIYLRGLVGALDGSEILRSEARGSQKDPETLGVYVAEQL 293 >gi|227114730|ref|ZP_03828386.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 313 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 115/284 (40%), Positives = 162/284 (57%), Gaps = 2/284 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GGKGLF Sbjct: 6 IRIATRQSPLALWQARYVQQCLN--HLYPDLHVELVPMVTRGDIILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL L S Sbjct: 64 KELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNHYDSLDQLPQGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 CVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLEARI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L+ E+ P+ GQGAI IE +++ + L+ +NH T V ERA L+G C+ Sbjct: 184 RCALSPEESLPAVGQGAIGIECRLDDEHVRHLLAPLNHPATAARVLAERAMNVRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 I +A +G TL+ +V A DG R GN DA +G Sbjct: 244 VPIGSYAELEGDTLWLRALVGAPDGSQMIVGERKGNVSDAEQLG 287 >gi|227325802|ref|ZP_03829826.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 313 Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 114/284 (40%), Positives = 164/284 (57%), Gaps = 2/284 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GGKGLF Sbjct: 6 IRIATRQSPLALWQARYVQQCLN--HLYPDLHVELVPMVTRGDIILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL+ L S Sbjct: 64 KELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNHYDSLEQLPEGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL E+ I Sbjct: 124 CVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLEERI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L+ E+ P+ GQGAI IE +++ ++L+ +NH T V ERA L+G C+ Sbjct: 184 RCALSPEESLPAVGQGAIGIECRLDDEHVRQLLAPLNHPATAARVLAERAMNVRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 I +A +G TL+ +V A DG R G DA +G Sbjct: 244 VPIGSYAELEGDTLWLRALVGAPDGSQMIVGERKGRVSDAEQLG 287 >gi|49388603|dbj|BAD25718.1| putative porphobilinogen deaminase [Oryza sativa Japonica Group] gi|215686353|dbj|BAG87614.1| unnamed protein product [Oryza sativa Japonica Group] gi|215717107|dbj|BAG95470.1| unnamed protein product [Oryza sativa Japonica Group] Length = 264 Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 105/260 (40%), Positives = 157/260 (60%), Gaps = 3/260 (1%) Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109 I ++ L +IGGKGLFT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD Sbjct: 2 ILDKPLADIGGKGLFTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDA 61 Query: 110 FISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAI 169 FI TA SL +L SV+G++SLRR++ +L + V++FRG ++TRL KL HA Sbjct: 62 FICLTASSLAELPAGSVVGSASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHAT 121 Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 LLA AG+KRL + +L++++ P+ QGAI I ++ + +NHEDT + Sbjct: 122 LLALAGLKRLNMAETATSVLSVDEMLPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLA 181 Query: 230 VNCERAFLAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAI 286 V CER FL+ LDG+C++ IA +A K F G++ + DG +E SR G + + Sbjct: 182 VACEREFLSVLDGNCRTPIAAYASRDKDGNCSFRGLLASPDGSTVYETSRTGPYDFDIMV 241 Query: 287 NIGRDAAQYIRFISNKNVFN 306 +G+DA ++ + F+ Sbjct: 242 EMGKDAGHELKAKAGPGFFD 261 >gi|311281516|ref|YP_003943747.1| porphobilinogen deaminase [Enterobacter cloacae SCF1] gi|308750711|gb|ADO50463.1| porphobilinogen deaminase [Enterobacter cloacae SCF1] Length = 318 Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 113/296 (38%), Positives = 164/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDKVLRIATRQSPLALWQAHYVKDRLTACH--PGLQVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL ++ RED RD F+S+ SL Sbjct: 64 KGLFVKELELALLEHRADIAVHSMKDVPVEFPQGLGLTTICEREDPRDAFVSNQYASLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAAQRPDLVIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L+ E P+ GQGA+ IE +++ + L+ +NH +T V ERA L Sbjct: 184 LESRIRQALSPEQSLPAVGQGAVGIECRLDDDATRALLAPLNHPETAVRVGAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ I +A +G L+ +V A DG R G +A +G A+ + Sbjct: 244 EGGCQVPIGSYAELQGGELWLRALVGAPDGSRMVRGERRGTPEEAERLGVSLAEEL 299 >gi|11467957|sp|O66621|HEM3_AQUAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 304 Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 115/289 (39%), Positives = 169/289 (58%), Gaps = 5/289 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + L K + ++ ++T GD+IT+ L +IGGKGLF Sbjct: 3 IRIGTRKSKLALWQANYVKDFL---EKHWGVEVELVKITTTGDKITDVPLAKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIEK L+ G ID AVHS KD+P + KGL++ A RE+ DV IS + + L +L S Sbjct: 60 KEIEKALLEGSIDLAVHSLKDVPMVIPKGLKLGAITKRENPYDVLISRSGKKLYELPSGS 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSSLRR+ + + R D+ V RG ++TR+ KL A++LAYAG+KR+ E I Sbjct: 120 VIGTSSLRRQVQIKKRRRDLKVEVLRGNVDTRMRKLKEGLYDAVILAYAGVKRMGYESEI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L EDF P+ GQG++ IE + + +EL+K +N+E+++ ER FL L+G C+ Sbjct: 180 TEVL--EDFIPAVGQGSLAIEIREGDKRIEELIKPLNNEESFLCAIAERTFLRRLEGGCQ 237 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 + FA + TL + + + + E R GN +A +G A+ Sbjct: 238 VPVGAFAKIENGTLKMKAFISDIEAERYIEGYREGNPEEAEKLGLSLAE 286 >gi|153875202|ref|ZP_02003104.1| porphobilinogen deaminase [Beggiatoa sp. PS] gi|152068334|gb|EDN66896.1| porphobilinogen deaminase [Beggiatoa sp. PS] Length = 309 Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 110/277 (39%), Positives = 161/277 (58%), Gaps = 4/277 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR SPLAL R L H P I ++ ++T+GD+I + L +IGGKG Sbjct: 4 KNIIRIATRKSPLALWQTHHVRDILCHAH--PQLQIELVEMTTQGDKILDVPLAKIGGKG 61 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L G++D AVHS KD+P + GL + + RE+ D F+S+ L Sbjct: 62 LFVKELENGLFEGKVDIAVHSMKDVPVEFPPGLILPVIMEREEPYDAFVSNHYSGFTALP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR+ LL R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 122 QGAIVGTSSLRRQCQLLVLRPDLQIRTLRGNVGTRLKKLDNGDYDAIILAAAGLKRLGMA 181 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+E+L E P+ GQGAI IE ++ + Q+L+ V+NH+ T + + ERA +L+G Sbjct: 182 ERIREVLKPEVMLPAIGQGAIGIECRADDTETQQLIAVLNHKPTQERLKAERALNEQLNG 241 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVS 277 C+ IAG+A + + G+V DGK + H+V Sbjct: 242 GCQVPIAGYAEIEAEMMTVRGLVGDIDGKEVLHHKVQ 278 >gi|108806170|ref|YP_650086.1| porphobilinogen deaminase [Yersinia pestis Antiqua] gi|108810280|ref|YP_646047.1| porphobilinogen deaminase [Yersinia pestis Nepal516] gi|145600717|ref|YP_001164793.1| porphobilinogen deaminase [Yersinia pestis Pestoides F] gi|153949991|ref|YP_001399195.1| porphobilinogen deaminase [Yersinia pseudotuberculosis IP 31758] gi|153997095|ref|ZP_02022228.1| porphobilinogen deaminase [Yersinia pestis CA88-4125] gi|161484901|ref|NP_667719.2| porphobilinogen deaminase [Yersinia pestis KIM 10] gi|161511325|ref|NP_994488.2| porphobilinogen deaminase [Yersinia pestis biovar Microtus str. 91001] gi|165926233|ref|ZP_02222065.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str. F1991016] gi|165939151|ref|ZP_02227702.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str. IP275] gi|166011678|ref|ZP_02232576.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str. E1979001] gi|166213633|ref|ZP_02239668.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str. B42003004] gi|167401822|ref|ZP_02307310.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421084|ref|ZP_02312837.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426299|ref|ZP_02318052.1| porphobilinogen deaminase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470637|ref|ZP_02335341.1| porphobilinogen deaminase [Yersinia pestis FV-1] gi|218930852|ref|YP_002348727.1| porphobilinogen deaminase [Yersinia pestis CO92] gi|229837182|ref|ZP_04457347.1| hydroxymethylbilane synthase [Yersinia pestis Pestoides A] gi|229839542|ref|ZP_04459701.1| hydroxymethylbilane synthase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229900105|ref|ZP_04515242.1| hydroxymethylbilane synthase [Yersinia pestis biovar Orientalis str. India 195] gi|229900449|ref|ZP_04515578.1| hydroxymethylbilane synthase [Yersinia pestis Nepal516] gi|270488804|ref|ZP_06205878.1| hydroxymethylbilane synthase [Yersinia pestis KIM D27] gi|294505512|ref|YP_003569574.1| porphobilinogen deaminase [Yersinia pestis Z176003] gi|17380441|sp|P46355|HEM3_YERPE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|122979815|sp|Q1CBN1|HEM3_YERPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123373560|sp|Q1CNI3|HEM3_YERPN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|158514109|sp|A4TRA8|HEM3_YERPP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|167008820|sp|A7FD67|HEM3_YERP3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|108773928|gb|ABG16447.1| hydroxymethylbilane synthase [Yersinia pestis Nepal516] gi|108778083|gb|ABG12141.1| hydroxymethylbilane synthase [Yersinia pestis Antiqua] gi|115349463|emb|CAL22436.1| porphobilinogen deaminase [Yersinia pestis CO92] gi|145212413|gb|ABP41820.1| hydroxymethylbilane synthase [Yersinia pestis Pestoides F] gi|149289401|gb|EDM39479.1| porphobilinogen deaminase [Yersinia pestis CA88-4125] gi|152961486|gb|ABS48947.1| porphobilinogen deaminase [Yersinia pseudotuberculosis IP 31758] gi|165912924|gb|EDR31550.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str. IP275] gi|165921757|gb|EDR38954.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str. F1991016] gi|165989447|gb|EDR41748.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str. E1979001] gi|166205306|gb|EDR49786.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str. B42003004] gi|166961213|gb|EDR57234.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048715|gb|EDR60123.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054818|gb|EDR64622.1| porphobilinogen deaminase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229682468|gb|EEO78555.1| hydroxymethylbilane synthase [Yersinia pestis Nepal516] gi|229686885|gb|EEO78964.1| hydroxymethylbilane synthase [Yersinia pestis biovar Orientalis str. India 195] gi|229695908|gb|EEO85955.1| hydroxymethylbilane synthase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706125|gb|EEO92134.1| hydroxymethylbilane synthase [Yersinia pestis Pestoides A] gi|262363578|gb|ACY60299.1| porphobilinogen deaminase [Yersinia pestis D106004] gi|262367506|gb|ACY64063.1| porphobilinogen deaminase [Yersinia pestis D182038] gi|270337308|gb|EFA48085.1| hydroxymethylbilane synthase [Yersinia pestis KIM D27] gi|294355971|gb|ADE66312.1| porphobilinogen deaminase [Yersinia pestis Z176003] gi|320013550|gb|ADV97121.1| hydroxymethylbilane synthase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 313 Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 116/289 (40%), Positives = 160/289 (55%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L Sbjct: 179 LENRIRYAMSAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I +A +G TL+ +V A DG R G +A +G Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMG 287 >gi|304309752|ref|YP_003809350.1| Porphobilinogen deaminase [gamma proteobacterium HdN1] gi|301795485|emb|CBL43683.1| Porphobilinogen deaminase [gamma proteobacterium HdN1] Length = 311 Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 113/270 (41%), Positives = 156/270 (57%), Gaps = 2/270 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR S LAL A R+ L+ H P ++ II ++TKGD+I + L +IGG Sbjct: 1 MSNHRIRIATRESALALWQAEHVRACLLAAH--PGLDVEIIGMTTKGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL +S L RED RD F+S+ +L Sbjct: 59 KGLFVKELEVAMLEGIADIAVHSMKDVPVDFPEGLGLSVILEREDPRDAFVSNQYDTLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GT SLRR+ L R DI +++ RG + +RL KL+ + AILLA AG+KRL Sbjct: 119 LPLGARVGTCSLRRQTQLRARRPDIEILELRGNVNSRLAKLDAGQFDAILLAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ P+ GQGAI IE ++ + L+ +NH DT V+ ERA L Sbjct: 179 FHERIRATLDPAASLPAVGQGAIGIECRTDDARTLALLAPLNHPDTHTCVSAERAMNHRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C+ IAG+A G LY G+V DG Sbjct: 239 QGGCQVPIAGYAELHGDQLYMRGLVGEPDG 268 >gi|170026227|ref|YP_001722732.1| porphobilinogen deaminase [Yersinia pseudotuberculosis YPIII] gi|238059009|sp|B1JPE6|HEM3_YERPY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|169752761|gb|ACA70279.1| porphobilinogen deaminase [Yersinia pseudotuberculosis YPIII] Length = 313 Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 116/289 (40%), Positives = 160/289 (55%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYTHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L Sbjct: 179 LENRIRYAMSAEESLPAVGQGAVGIECRLDDGHTRQLLAPLNHRHTELRVCAERAMNIRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I +A +G TL+ +V A DG R G +A +G Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMG 287 >gi|262280694|ref|ZP_06058477.1| porphobilinogen deaminase [Acinetobacter calcoaceticus RUH2202] gi|262257594|gb|EEY76329.1| porphobilinogen deaminase [Acinetobacter calcoaceticus RUH2202] Length = 314 Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 111/293 (37%), Positives = 170/293 (58%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL Sbjct: 11 KTLKIATRQSPLALWQAEYIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 69 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ +L+ R D+ VID RG + TRL KL++ + AI+LA AG+KRL + Sbjct: 129 GAKVGTSSLRRKSQILKQRPDLQVIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLSE 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L + P+ GQGA+ +E + + L++ + HE+T V ERAF A L+G Sbjct: 189 RIRHCLTPDISLPAVGQGALGLECRAADNEVLSLIQPLLHEETDVCVRAERAFNAYLEGG 248 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ IAG+A + ++ G V ++DG+ +A +G + A+ + Sbjct: 249 CQVPIAGYATLQNGQIHIEGRVGSADGQTLLRAELTDEASNAHQLGENLARNL 301 >gi|188532369|ref|YP_001906166.1| Porphobilinogen deaminase [Erwinia tasmaniensis Et1/99] gi|238058922|sp|B2VG55|HEM3_ERWT9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|188027411|emb|CAO95258.1| Porphobilinogen deaminase [Erwinia tasmaniensis Et1/99] Length = 313 Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 110/289 (38%), Positives = 163/289 (56%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L+ H P + ++P+ T+GD I + L ++GG Sbjct: 1 MSDKILRIATRRSPLALWQAEYVQRRLIACH--PGLRVELLPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++SG D AVHS KD+P GL + A RED D F+SH S+ Sbjct: 59 KGLFVKELEQAMLSGSADIAVHSMKDVPVAFPPGLGLVAICEREDPHDAFVSHHYTSVDS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPQGAIVGTSSLRRQCQLSARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I++++ E+ P+ GQGA+ IE +++ + L+ +NH +T V+ ERA L Sbjct: 179 LGDRIRQVMPAEESLPAVGQGAVGIECRLDDIQTIALLAALNHSETACRVSAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I +A + L+ G+V + DG R G R DA +G Sbjct: 239 EGGCQVPIGSYALLEDDQLWLRGLVGSPDGNEMVRGERRGPRADAEKMG 287 >gi|78189475|ref|YP_379813.1| porphobilinogen deaminase [Chlorobium chlorochromatii CaD3] gi|123757008|sp|Q3AQF5|HEM3_CHLCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78171674|gb|ABB28770.1| Porphobilinogen deaminase [Chlorobium chlorochromatii CaD3] Length = 313 Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 115/280 (41%), Positives = 165/280 (58%), Gaps = 4/280 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK IGTR SPLAL A T++ L + P I + + T GD + + L++IG G Sbjct: 2 KKQLIIGTRSSPLALWQAEFTKAELSKHY--PDMEITLKLVKTTGDVLLDSPLSKIGDMG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT++IEK L++ EID AVHS KD+PT +GL I+++ RED RDV IS LKDL Sbjct: 60 LFTKDIEKHLLAREIDLAVHSLKDVPTSTPEGLIITSFTEREDTRDVIISKGGVKLKDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ + TSSLRR + LL R D+ + D RG + TR K ++ + A++LAYAG+ RL Sbjct: 120 PNARMATSSLRRMSQLLSVRPDLDIRDIRGNLNTRFQKFDDGEFDAMMLAYAGVYRLNFS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EIL + P+ GQGA+ IET V++ + +E+V+++NH T ERA L L G Sbjct: 180 DRISEILPHDMMLPAVGQGALGIETRVDDEQTREIVRILNHSTTEYCCRAERALLRHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNG 280 C+ I +A TL V + DGK + +E+++ G Sbjct: 240 GCQIPIGAYATFSNGTLKLLAFVGSVDGKTALRNEITKTG 279 >gi|21957067|gb|AAM83970.1|AE013638_8 porphobilinogen deaminase; hydroxymethylbilane synthase [Yersinia pestis KIM 10] gi|45437816|gb|AAS63365.1| porphobilinogen deaminase [Yersinia pestis biovar Microtus str. 91001] Length = 369 Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 117/293 (39%), Positives = 162/293 (55%), Gaps = 2/293 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG Sbjct: 57 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 114 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D Sbjct: 115 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDD 174 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL Sbjct: 175 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 234 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L Sbjct: 235 LENRIRYAMSAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRL 294 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 +G C+ I +A +G TL+ +V A DG R G +A +G + A Sbjct: 295 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELA 347 >gi|15605804|ref|NP_213181.1| porphobilinogen deaminase [Aquifex aeolicus VF5] gi|2982966|gb|AAC06580.1| porphobilinogen deaminase [Aquifex aeolicus VF5] Length = 323 Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 114/289 (39%), Positives = 169/289 (58%), Gaps = 5/289 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + L + + ++ ++T GD+IT+ L +IGGKGLF Sbjct: 22 IRIGTRKSKLALWQANYVKDFLEKHWGV---EVELVKITTTGDKITDVPLAKIGGKGLFV 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIEK L+ G ID AVHS KD+P + KGL++ A RE+ DV IS + + L +L S Sbjct: 79 KEIEKALLEGSIDLAVHSLKDVPMVIPKGLKLGAITKRENPYDVLISRSGKKLYELPSGS 138 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSSLRR+ + + R D+ V RG ++TR+ KL A++LAYAG+KR+ E I Sbjct: 139 VIGTSSLRRQVQIKKRRRDLKVEVLRGNVDTRMRKLKEGLYDAVILAYAGVKRMGYESEI 198 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L EDF P+ GQG++ IE + + +EL+K +N+E+++ ER FL L+G C+ Sbjct: 199 TEVL--EDFIPAVGQGSLAIEIREGDKRIEELIKPLNNEESFLCAIAERTFLRRLEGGCQ 256 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 + FA + TL + + + + E R GN +A +G A+ Sbjct: 257 VPVGAFAKIENGTLKMKAFISDIEAERYIEGYREGNPEEAEKLGLSLAE 305 >gi|323495298|ref|ZP_08100379.1| porphobilinogen deaminase [Vibrio brasiliensis LMG 20546] gi|323310475|gb|EGA63658.1| porphobilinogen deaminase [Vibrio brasiliensis LMG 20546] Length = 312 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 110/305 (36%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QTTPIRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T S+ +L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNSIDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ + R D+ + + RG + TRL KL+ AI+LA AG+KRL+ Sbjct: 121 PQGAVVGTCSLRRQCQIKEARPDLIIKELRGNVGTRLGKLDAGDYDAIILAAAGLKRLEL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ IK + E P+ GQGA+ IE +++ + +L++ +NH++T D V CERA L+ Sbjct: 181 EERIKSFIEPEQSLPAVGQGAVGIECRLDDDRLIKLLEPLNHKETADRVLCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I ++ G ++ +V DG G+R DA +G + A + Sbjct: 241 GGCQVPIGSYSLIDGDNIWLRALVGEPDGSKIVRGEIRGSRTDAEALGVELANQLLADGA 300 Query: 302 KNVFN 306 K + Sbjct: 301 KEILT 305 >gi|254427203|ref|ZP_05040910.1| porphobilinogen deaminase [Alcanivorax sp. DG881] gi|196193372|gb|EDX88331.1| porphobilinogen deaminase [Alcanivorax sp. DG881] Length = 310 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 111/296 (37%), Positives = 167/296 (56%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ RI TR SPLA+ A + L +H+ + ++ + T+GD+I + L +IGG Sbjct: 1 MSREILRIATRSSPLAIWQAEYVQQRLESLHE--GLAVELVRIKTQGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P +L +G + RED RD F+S+T SL Sbjct: 59 KGLFVKELEEAMMDGRADIAVHSMKDVPMELPEGFALPVICEREDPRDAFVSNTFDSLSS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+A + R D+ V RG ++TRL KL+ + AI+LA AG+KRL+ Sbjct: 119 LPHGACVGTSSLRRQAQVKANRPDLVVKSLRGNVQTRLGKLDAGEFDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ + E+ P+ GQGA+ IE + + +L+ ++ DTWD V ERA L Sbjct: 179 MHDRIRYEMPPEESLPAVGQGAVGIECREADTRTIDLLSPLSDVDTWDRVVAERAMNRRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 DG C+ IAGFA + L+ G+V DG + R +G D A+ + Sbjct: 239 DGGCQVPIAGFALLEDGQLWLRGLVAEEDGSRVLRAEGSAPRAKGAELGIDIAEQL 294 >gi|270264251|ref|ZP_06192518.1| porphobilinogen deaminase [Serratia odorifera 4Rx13] gi|270041900|gb|EFA14997.1| porphobilinogen deaminase [Serratia odorifera 4Rx13] Length = 313 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 116/296 (39%), Positives = 164/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQQRLMASH--PGLQVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P GL + R+D RD F+S+ S Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIDFPAGLGLVTICERDDPRDAFVSNRFASFDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR++ L R D+ V D RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPQGSVVGTSSLRRQSQLRERRPDLIVRDLRGNVGTRLAKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ L+ E+ P+ GQGA+ IE +++ + L+ +NH T V ERA L Sbjct: 179 LEQRIRSPLSPEECLPAVGQGAVGIECRLDDDATRALLAPLNHAATDIRVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ I +A +G +L+ +V + DG R G A +G + A+ + Sbjct: 239 EGGCQVPIGSYAELEGDSLWLRALVGSPDGSQMVRGERRGPAALAEQMGVELAEEL 294 >gi|56421180|ref|YP_148498.1| porphobilinogen deaminase [Geobacillus kaustophilus HTA426] gi|61213219|sp|Q5KWK6|HEM3_GEOKA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|56381022|dbj|BAD76930.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Geobacillus kaustophilus HTA426] Length = 309 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 117/288 (40%), Positives = 175/288 (60%), Gaps = 7/288 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +G+R S LAL +T+ + ++ ++ P + + TKGDR+ + TL+++GGKGLF + Sbjct: 6 VGSRRSKLALT---QTKWVINELKQLGAPFTFEVKEIVTKGDRVLDVTLSKVGGKGLFVK 62 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE +L++G ID AVHS KDMP L +GL I A RED RDV +S + L DL SV Sbjct: 63 EIEHELLAGGIDMAVHSMKDMPAVLPEGLVIGAVSRREDARDVLVSKGNRMLSDLPPGSV 122 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVI 185 IGTSSLRR A LL +R D+++ RG I+TRL KL + + AI+LA AG+ R+ + VI Sbjct: 123 IGTSSLRRSAQLLAYRPDLTIKWIRGNIDTRLAKLESEEYDAIVLAAAGLARMGWGDDVI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L + P+ GQGA+ +E ++ + ++ + +N E T +V ERAFL +++G C+ Sbjct: 183 SDYLPFDVCVPAVGQGALAVECREDDDELRQWLSRLNDEQTERAVRAERAFLQQMEGGCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 IAG+A K T+ +V + DGK ++ G D +GR AA Sbjct: 243 VPIAGYAEVKEGTVRLTALVASPDGKEMYKEIVTG--ADPEAVGRQAA 288 >gi|258591837|emb|CBE68140.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [NC10 bacterium 'Dutch sediment'] Length = 315 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 109/271 (40%), Positives = 152/271 (56%), Gaps = 2/271 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++GTR SPLAL A L + P ++ I+P+ T GD+ + L+++GG Sbjct: 1 MRSHTVKLGTRGSPLALCQAGLVTEELR--RRWPDLDVTIVPIKTSGDKFLDVVLSQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L+ G ID AVHS KD+P +L GL A + RED D ++ D Sbjct: 59 KGLFVKEIEEALLDGRIDLAVHSLKDLPAELAPGLCEGAVMRREDPLDALVARNGLRFTD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSSLRR+ L R D+ + RG ++TRLNKL A++LA AG+ RL Sbjct: 119 LPRGARIGTSSLRRQVQFLHCRPDLQIESLRGNVQTRLNKLETLGLEAVVLAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I E L + P+ GQGA+ IE ++ + E V+ +NH +T + ERAFL L Sbjct: 179 LQDRITERLQPDLCLPAIGQGALVIEIREDDRQTAERVETLNHRETRQATTAERAFLRRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 GSC + IA F +G TL G+V DGK Sbjct: 239 GGSCVTPIAAFGRLEGETLELTGMVAGLDGK 269 >gi|52081298|ref|YP_080089.1| porphobilinogen deaminase [Bacillus licheniformis ATCC 14580] gi|52786677|ref|YP_092506.1| porphobilinogen deaminase [Bacillus licheniformis ATCC 14580] gi|319647211|ref|ZP_08001433.1| porphobilinogen deaminase [Bacillus sp. BT1B_CT2] gi|81609014|sp|Q65GK1|HEM3_BACLD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|52004509|gb|AAU24451.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus licheniformis ATCC 14580] gi|52349179|gb|AAU41813.1| HemC [Bacillus licheniformis ATCC 14580] gi|317390558|gb|EFV71363.1| porphobilinogen deaminase [Bacillus sp. BT1B_CT2] Length = 313 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 119/291 (40%), Positives = 169/291 (58%), Gaps = 6/291 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LA+ L +++ P I + TKGDRI + TL+++GGKGLF +E Sbjct: 6 VGSRRSKLAMTQTKWVIKKLEELN--PDFTFEIKEIVTKGDRILDVTLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ ++SGEID AVHS KDMP+ L +GL + RED RDV IS Q L DL +V+ Sbjct: 64 IEQAMLSGEIDMAVHSMKDMPSVLPEGLMVGCIPKREDARDVLISKGRQKLADLKQGAVV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A LL+ R D+ + RG I+TRL KL AI+LA AG+ R+ K+ V+ Sbjct: 124 GTSSLRRSAQLLQMRPDLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLSRMGWKDDVVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E L+ E P+ GQGA+ IE ++ + L +N T +V ERAFL ++G C+ Sbjct: 184 EFLDPESCLPAVGQGALAIECRGSDEELLSLFSRLNDRYTQLTVTAERAFLHAMEGGCQV 243 Query: 247 AIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 IAGFA + + G+V + DGK + + G +A +GR+ A + Sbjct: 244 PIAGFAKMDEDGVIELTGLVASPDGKTVYRETVKGKDPEA--VGRECAAVM 292 >gi|110598700|ref|ZP_01386964.1| porphobilinogen deaminase [Chlorobium ferrooxidans DSM 13031] gi|110339694|gb|EAT58205.1| porphobilinogen deaminase [Chlorobium ferrooxidans DSM 13031] Length = 313 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 116/280 (41%), Positives = 165/280 (58%), Gaps = 4/280 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG G Sbjct: 2 KKQLIIGTRSSPLALWQAEFTKTEL--SRHFPELDIKLKLVKTTGDVLLDSPLSKIGDMG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT++IEK LI+ EID AVHS KD+PT +GL I+++ RED RDV IS LK+L Sbjct: 60 LFTKDIEKHLIAKEIDLAVHSLKDVPTGTPEGLIITSFTEREDTRDVIISKGGVKLKELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ + TSSLRR + LL R D+ + D RG + TR K + + A++LAYAG+ RL Sbjct: 120 ANAKMATSSLRRMSQLLSLRPDLDIRDIRGNLNTRFQKFDAGEFDAMMLAYAGVYRLNFS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EIL E P+ GQGA+ IET V++ + +E+V+++NH +T ERA L L G Sbjct: 180 DRISEILPHEVMLPAVGQGALGIETRVDDEQTREIVRILNHSNTEYCCRAERALLRHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKI-FH-EVSRNG 280 C+ I + + TL V + DGK+ H E+++ G Sbjct: 240 GCQIPIGAYGSFQNGTLKLLAYVGSVDGKVGLHDEITKTG 279 >gi|225848376|ref|YP_002728539.1| porphobilinogen deaminase [Sulfurihydrogenibium azorense Az-Fu1] gi|225644642|gb|ACN99692.1| porphobilinogen deaminase [Sulfurihydrogenibium azorense Az-Fu1] Length = 308 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 104/267 (38%), Positives = 166/267 (62%), Gaps = 3/267 (1%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 RIGTR S LAL A + + +H + + ++ ++T GD+I + L +IGGKGLF + Sbjct: 4 RIGTRKSQLALWQANYIANLINQIHGV---EVELVKITTSGDKILDVPLAKIGGKGLFVK 60 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE ++ GEID AVHS KD+PT+L +GL I A RED RD F+S +SLKDL +V Sbjct: 61 EIEDAMLKGEIDIAVHSLKDVPTQLPEGLDIIAITEREDPRDAFLSTKYKSLKDLPAGAV 120 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSSLRRK+ +++ R D+ + D RG ++TR+ KL + AI+LAYAG+KRL + Sbjct: 121 VGTSSLRRKSQIMKMRDDLIINDLRGNVDTRIRKLEEGQYDAIILAYAGLKRLGLDSKAS 180 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 I + ++ P+ QG + IE V++ + +++++ IN+++++ ER+FL L+G C+ Sbjct: 181 YIFSPQEMIPAVCQGFLGIEARVDDERIKKILEPINNQESFIRATAERSFLKTLEGGCQV 240 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIF 273 + + K ++ G + +GK F Sbjct: 241 PLGAYCEIKDDFIHITGFIADLEGKTF 267 >gi|295687518|ref|YP_003591211.1| porphobilinogen deaminase [Caulobacter segnis ATCC 21756] gi|295429421|gb|ADG08593.1| porphobilinogen deaminase [Caulobacter segnis ATCC 21756] Length = 333 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 117/280 (41%), Positives = 161/280 (57%), Gaps = 17/280 (6%) Query: 3 KKPFRIGTRCSPLALAHA--FETR----------SSLMDVHKIPPHNIVIIPLSTKGDRI 50 + P RIG R S L+LA + + R +S ++ P +IP+ T GDRI Sbjct: 15 QPPIRIGARGSKLSLAQSGLMQARIAAALGAPAGASKEEIEAFAP----LIPIVTSGDRI 70 Query: 51 TNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF 110 +R L EIGGKGLFT+EIE+ L+ G IDCAVHS KDMP +L GL ++A RED RD F Sbjct: 71 QDRRLMEIGGKGLFTKEIEEALLDGRIDCAVHSLKDMPAELPPGLVLAATPEREDPRDAF 130 Query: 111 ISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAIL 170 ISH + L+DL + +GT+SLRR+A L R D+ ++ RG ++TRL KL +A AIL Sbjct: 131 ISHVCERLEDLPKGARLGTASLRRQAQALHVRPDLEIVMLRGNVDTRLAKLERGEADAIL 190 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 LA +G+ RL + K ++ + PP+PGQGA+ IET + A L + T +V Sbjct: 191 LAQSGLNRLGLGHLTKSWIDPDACPPAPGQGALVIETRAEDIGAAWL-DAVRCRPTTIAV 249 Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 ER L L+GSC++AI A G+ L L +G Sbjct: 250 AAERGALLALEGSCRTAIGARATLDGARLSMIVEALTPNG 289 >gi|323141796|ref|ZP_08076663.1| hydroxymethylbilane synthase [Phascolarctobacterium sp. YIT 12067] gi|322413719|gb|EFY04571.1| hydroxymethylbilane synthase [Phascolarctobacterium sp. YIT 12067] Length = 306 Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 113/303 (37%), Positives = 173/303 (57%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K IGTR S LAL + + L + P +V+ + TKGDRI + L +IGGKG Sbjct: 2 KAKLTIGTRQSLLALWQSNHIAALLR--KEYPECEVVLKKIVTKGDRILDVPLAQIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+EIE+ L+ G +D AVHS KDMPT L +GL ++A R ++ D F+S+ + ++L Sbjct: 60 LFTKEIEEDLLDGTVDLAVHSLKDMPTVLPEGLCLTAITERANVGDAFVSNKYATFEELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 L SV+GTSSLRRKA LL R D+ + D RG ++TRL KL+ AI+LA AG++RL Sbjct: 120 LGSVVGTSSLRRKAQLLAKRPDLEIRDLRGNVDTRLRKLDEGLYDAIILAAAGLERLGHG 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I ++ + P+ GQGA+ IE + + ++++ +N +T + + ERAFL L+G Sbjct: 180 DRISSLIPADVCLPAVGQGALAIEARTADKEVRDMLSFLNDLNTKQATDAERAFLGLLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I A +G + I+ A DG + NG DA+++G+ + + + Sbjct: 240 GCQVPIGVHADVEGENIRIEAIIAALDGSTILRDTINGKADDAVSLGQQLGKKMLAAGGQ 299 Query: 303 NVF 305 + Sbjct: 300 EIL 302 >gi|315178740|gb|ADT85654.1| porphobilinogen deaminase [Vibrio furnissii NCTC 11218] Length = 312 Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 110/302 (36%), Positives = 167/302 (55%), Gaps = 2/302 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RI TR SPLAL A + +L H P + ++ + T+GD I + L ++GGKGLF Sbjct: 6 PIRIATRQSPLALWQAHFVKDALQAAH--PGLEVELVTMVTRGDVILDTPLAKVGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T SL +L Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYASLDELPHG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +++GT SLRR+ L R D+ + + RG + TRL KL+ + AI+LA AG+KRLK E+ Sbjct: 124 AIVGTCSLRRQCQLKEARPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKLEQR 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ ++ E P+ GQGA+ IE +++ + + L+ ++ DT D V CERA L+G C Sbjct: 184 IRSLIEPEQSLPAVGQGAVGIECRLDDARLRALLAPLSDADTTDRVLCERAMNLTLEGGC 243 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I +A G L+ +V DG G R DA +G + A + +++ Sbjct: 244 QVPIGSYALLDGDDLWLRALVGEPDGSHIVRGEIRGPRQDAERLGVELANQLLADGARDI 303 Query: 305 FN 306 Sbjct: 304 LT 305 >gi|157833452|pdb|1PDA|A Chain A, Structure Of Porphobilinogen Deaminase Reveals A Flexible Multidomain Polymerase With A Single Catalytic Site gi|41664|emb|CAA27813.1| unnamed protein product [Escherichia coli] Length = 313 Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 113/291 (38%), Positives = 163/291 (56%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G+C+ Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGACQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ G+V A DG R G DA +G A+ + Sbjct: 244 VPIGSYAELIDGEIWLRGLVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294 >gi|327439433|dbj|BAK15798.1| porphobilinogen deaminase [Solibacillus silvestris StLB046] Length = 310 Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 111/281 (39%), Positives = 163/281 (58%), Gaps = 3/281 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + L + P + + + TKGDRI + L+++GGKGLF +E Sbjct: 6 VGSRKSKLALTQTNWFINELKEAG--VPFDFEVKEIVTKGDRILDVQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ L EID AVHS KDMP L +GL I PRED RD FIS+ DL +++ Sbjct: 64 IEQALYDKEIDFAVHSMKDMPAVLPEGLIIGCIPPREDARDAFISNGHVKFADLPKGAIV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A LL+ R D+ + RG ++TRL KL AI+LA AG+KRL ++V+ Sbjct: 124 GTSSLRRSAQLLQARPDLEIKWIRGNVDTRLKKLETEDFDAIILAAAGLKRLGWSDEVVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E L+ + P+ QG++ IE ++ + E + + TW + + ER+FLA +DG C+ Sbjct: 184 EYLDTDICLPAVAQGSLGIECRADDTELLEQLTKLTDATTWATAHAERSFLAAMDGGCQV 243 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 IAG+A +G T+ G+V A D + ++ + G DA+ Sbjct: 244 PIAGYATVEGDTITLTGLVAAPDASVTYKETLTGTDADAVG 284 >gi|191174267|ref|ZP_03035776.1| porphobilinogen deaminase [Escherichia coli F11] gi|190905450|gb|EDV65080.1| porphobilinogen deaminase [Escherichia coli F11] Length = 318 Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 113/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 11 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL L S Sbjct: 69 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDALPAGS 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 129 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 189 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 248 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 249 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 299 >gi|260596029|ref|YP_003208600.1| porphobilinogen deaminase [Cronobacter turicensis z3032] gi|260215206|emb|CBA27057.1| Porphobilinogen deaminase [Cronobacter turicensis z3032] Length = 313 Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 164/291 (56%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAQYVKQRLEACH--PGLTVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ +SL ++ S Sbjct: 64 KELELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNRYKSLDEMPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ + R D+ + RG + TRL+KL+N AI+LA AG+KRL+ + I Sbjct: 124 IVGTSSLRRQCQIAARRPDLIIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLQLDARI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L E P+ GQGA+ IE +++ + +EL+ +NHE+T V ERA L+G C+ Sbjct: 184 TSPLAPEISLPAVGQGAVGIECRLDDTRTRELLAPLNHEETAVRVRAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A K L+ +V A DG R G DA +G A+ + Sbjct: 244 VPIGSYAELKDGELWLRALVGAPDGSRIVRGERRGAPQDASQLGVSLAEEL 294 >gi|206580079|ref|YP_002241132.1| porphobilinogen deaminase [Klebsiella pneumoniae 342] gi|290513167|ref|ZP_06552529.1| porphobilinogen deaminase [Klebsiella sp. 1_1_55] gi|226706289|sp|B5XYL1|HEM3_KLEP3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|206569137|gb|ACI10913.1| porphobilinogen deaminase [Klebsiella pneumoniae 342] gi|289774378|gb|EFD82384.1| porphobilinogen deaminase [Klebsiella sp. 1_1_55] Length = 313 Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 112/289 (38%), Positives = 163/289 (56%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +I TR SPLAL A ++ L H P N+ ++P+ T+GD I + L ++GG Sbjct: 1 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLNVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + R+D RD F+S+ S+ + Sbjct: 59 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYASIDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRLK Sbjct: 119 LPAGSVVGTSSLRRQCQLAATRPDLVIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L+ E P+ GQGA+ IE +++ Q L+ +NH +T V ERA L Sbjct: 179 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTQALLAPLNHAETAVRVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I +A L+ +V A DG R G A +G Sbjct: 239 EGGCQVPIGSYAELVNGELWLRALVGAPDGSQMVRGERRGPAEQAEALG 287 >gi|192360982|ref|YP_001983840.1| porphobilinogen deaminase [Cellvibrio japonicus Ueda107] gi|190687147|gb|ACE84825.1| porphobilinogen deaminase [Cellvibrio japonicus Ueda107] Length = 315 Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 109/273 (39%), Positives = 165/273 (60%), Gaps = 4/273 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LAL A ++ L H P + ++PL+++GD+I + L ++GGKGLF Sbjct: 8 LRIATRKSLLALWQADYVKTELERHH--PGLRVELVPLTSRGDKILDVPLAKVGGKGLFV 65 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L++G D AVHS KD+P + GL ++ PRED RD F+S+ SL DL + Sbjct: 66 KELEQALLAGAADIAVHSMKDVPMEFPDGLGLAVICPREDARDAFVSNRFASLDDLPAGA 125 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ LL R D+ V RG ++TRL KL++ + AI+LA AG+ RL+ + I Sbjct: 126 VVGTSSLRRQCQLLARRPDLQVKFLRGNVQTRLQKLDDGEYDAIILAAAGLIRLELQARI 185 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ E P+ GQGA+ IE + + L++ ++H+ T + V ERA L G C+ Sbjct: 186 RSLIAPEVSLPAGGQGAVGIECRMQDQATLALLQPLHHQPTAEQVLAERAMNRRLQGGCQ 245 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK--IFHEV 276 IA +A +G L+ G+V A DG +F E+ Sbjct: 246 VPIACYALQQGGELWLRGLVGAPDGSQMLFDEI 278 >gi|212710180|ref|ZP_03318308.1| hypothetical protein PROVALCAL_01234 [Providencia alcalifaciens DSM 30120] gi|212687179|gb|EEB46707.1| hypothetical protein PROVALCAL_01234 [Providencia alcalifaciens DSM 30120] Length = 314 Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 167/291 (57%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A+ ++ L +H + ++P+ TKGD I + L ++GGKGLF Sbjct: 7 VRIATRKSPLALWQAYFVKAKLEQLHS--GLQVELVPMVTKGDIILDTPLAKVGGKGLFV 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P + +GL + RED RD F+S+ ++ L S Sbjct: 65 KELELALLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYANIDALPAGS 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL+ ++ I Sbjct: 125 IVGTSSLRRQCQLRELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLELDERI 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 K L E P+ GQGA+ IE +N+ + ++L+ +NH+ T V ERA L+G C+ Sbjct: 185 KTALEPEQSLPAVGQGAVGIECRLNDQRTRDLLAKLNHDATSICVLAERAMNMRLEGGCQ 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A +G ++ +V A DG R DAI G A+ + Sbjct: 245 VPIGSYAIWQGDKIWLRALVGAPDGSQVIRGERLIAPVDAIQAGISLAEEL 295 >gi|299771850|ref|YP_003733876.1| porphobilinogen deaminase [Acinetobacter sp. DR1] gi|298701938|gb|ADI92503.1| porphobilinogen deaminase [Acinetobacter sp. DR1] Length = 309 Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 110/293 (37%), Positives = 168/293 (57%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL Sbjct: 6 KTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 64 FVKELEAALLDGRADLAVHSMKDVPMALPEGLSLAVICEREDPLDAFVSNQFEKFADLPQ 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL + Sbjct: 124 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLSE 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L + P+ GQGA+ +E + L++ + HE+T V ERAF A L+G Sbjct: 184 RIRHCLTPDISLPAVGQGALGLECRAADQDVLALIQPLLHEETDVCVRAERAFNAYLEGG 243 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ IAG+A + ++ G V + DG+ +A +G + A+ + Sbjct: 244 CQVPIAGYATLQNGQIHIEGRVGSPDGQTLLRAELTDEASNAHQLGENLARNL 296 >gi|288937772|ref|YP_003441831.1| porphobilinogen deaminase [Klebsiella variicola At-22] gi|288892481|gb|ADC60799.1| porphobilinogen deaminase [Klebsiella variicola At-22] Length = 318 Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 112/289 (38%), Positives = 163/289 (56%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +I TR SPLAL A ++ L H P N+ ++P+ T+GD I + L ++GG Sbjct: 6 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLNVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + R+D RD F+S+ S+ + Sbjct: 64 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYASIDE 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRLK Sbjct: 124 LPAGSVVGTSSLRRQCQLAATRPDLVIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLK 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L+ E P+ GQGA+ IE +++ Q L+ +NH +T V ERA L Sbjct: 184 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTQALLAPLNHAETAVRVRAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I +A L+ +V A DG R G A +G Sbjct: 244 EGGCQVPIGSYAELVNGELWLRALVGAPDGSQMVRGERRGPAEQAEALG 292 >gi|327395980|dbj|BAK13402.1| porphobilinogen deaminase HemC [Pantoea ananatis AJ13355] Length = 317 Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 111/289 (38%), Positives = 163/289 (56%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K FRI TR SPLAL A + L+ H P + ++P+ TKGD I + L ++GG Sbjct: 5 MLNKIFRIATRQSPLALWQAQYVQQRLISAH--PGLRVELVPMVTKGDIILDTPLAKVGG 62 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ D AVHS KD+P +GL + R+D RD F+S+ S+ + Sbjct: 63 KGLFVKELEQAMLENRADLAVHSMKDVPVAFPEGLGLVTICQRDDPRDAFVSNHYASIDE 122 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSSLRR+ + R D+ + RG + TRL+KL+ + AI+LA AG+ RL Sbjct: 123 LPQGAVIGTSSLRRQCQISARRPDLVIRSLRGNVGTRLSKLDAGEYDAIILAAAGLNRLG 182 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I++ L + P+ GQGA+ IE +++ L++ +NH+DT V ERA L Sbjct: 183 LADRIRQPLPADISLPAVGQGAVGIECRLDDSTLIALLQALNHDDTAVCVRAERAMNTRL 242 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I FA +G L+ G+V A DG + R G R A +G Sbjct: 243 EGGCQVPIGSFAVLEGDELWLRGLVGAPDGSVMVSGERRGPRDQAEQMG 291 >gi|240141705|ref|YP_002966185.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Methylobacterium extorquens AM1] gi|240011682|gb|ACS42908.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Methylobacterium extorquens AM1] Length = 294 Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 113/292 (38%), Positives = 165/292 (56%), Gaps = 3/292 (1%) Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74 +ALA R ++ + P I+ +ST DR+ +R L+EIGGKGLFT+E+E+ L + Sbjct: 1 MALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIGGKGLFTKELEQALFA 58 Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDLALHSVIGTSSLR 133 EID AVHS KD+ T L GL I+ L R+D RD F+S + A L DL + +GTSSLR Sbjct: 59 DEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADLPPGARVGTSSLR 118 Query: 134 RKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIED 193 R A +L R D++++ RG TR+ KL + A LLA AG++RL V + +L++E+ Sbjct: 119 RGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGMADVARSVLSVEE 178 Query: 194 FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY 253 P+ QGA+ IE + + L+ + T +++ ER LAELDGSC++ IA A Sbjct: 179 MLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELDGSCRTPIAALAQ 238 Query: 254 CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 KG + G++ DG V R G DA IGR+A ++ + F Sbjct: 239 VKGDRISLDGLLFLPDGSRHWAVHREGLAADADAIGREAGAELKRAAGDVYF 290 >gi|238784737|ref|ZP_04628740.1| Porphobilinogen deaminase [Yersinia bercovieri ATCC 43970] gi|238714333|gb|EEQ06342.1| Porphobilinogen deaminase [Yersinia bercovieri ATCC 43970] Length = 313 Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 113/289 (39%), Positives = 161/289 (55%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLHVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P GL + R+D RD F+S + L D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPDGLGLVTICERDDPRDAFVSSSYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + +E+ P+ GQGA+ IE +++ ++L+ +NH DT V ERA L Sbjct: 179 LETRIRYAMPVEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRDTELRVCAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I +A +G L+ +V A DG R G +A +G Sbjct: 239 EGGCQVPIGSYAELEGDVLWLRALVGAPDGSEIIRGERRGPANNAEQMG 287 >gi|289207199|ref|YP_003459265.1| porphobilinogen deaminase [Thioalkalivibrio sp. K90mix] gi|288942830|gb|ADC70529.1| porphobilinogen deaminase [Thioalkalivibrio sp. K90mix] Length = 315 Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 114/286 (39%), Positives = 159/286 (55%), Gaps = 2/286 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 KP RI TR SPLA+ A + L +H P + ++ ++T+GDR+ + L IGGKGL Sbjct: 2 KPLRIATRKSPLAMWQAEHVAARLRGLH--PDLPVELVGMTTQGDRVLDSPLARIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++ D AVHS KD+P +L L + L RED D F+S+T + +L Sbjct: 60 FVKELEVAMLEDRADIAVHSVKDVPMELPADLVLPVILDREDPLDAFVSNTYAHVDELPQ 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +G+SSLRR+ L R D+ + D RG + TRL KL+ + AILLA AG+KRL ++ Sbjct: 120 GARVGSSSLRRQCQLRARRPDLKITDLRGNVNTRLGKLDAGEYDAILLAAAGLKRLGFDE 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L P+ GQGAI IE N+P+ L+ +N DT D V ERAF L+G Sbjct: 180 RIRARLEPAVSLPAVGQGAIAIECRENDPEIAALIAPLNDRDTSDRVRAERAFNRRLEGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 C+ +AG A G L G+V A DG G R DA +G Sbjct: 240 CQVPLAGHATLDGDRLRLDGLVGAVDGSQLLRRQVEGPRGDAEALG 285 >gi|293390862|ref|ZP_06635196.1| porphobilinogen deaminase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951396|gb|EFE01515.1| porphobilinogen deaminase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 308 Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 106/270 (39%), Positives = 160/270 (59%), Gaps = 2/270 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K +I TR SPLAL A + L ++ P N+ ++P+ TKGD I + L +IGG Sbjct: 1 MTQKSLKIATRQSPLALWQANYVKDRLQQLY--PDLNVELVPMVTKGDVILDSPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L++ E D AVHS KD+P + +GL ++ RED RD F+S++ ++L + Sbjct: 59 KGLFVKELENALLNKEADIAVHSMKDVPMQFPEGLGLAVICKREDPRDAFVSNSYRTLAE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L + R D+ + RG + TRL+KL+N AI+LA AG+ RL Sbjct: 119 LPQGAVVGTSSLRRQCQLKKLRPDLEIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I +++E P+ GQGA+ IE ++ Q+L+ + +T V ERA L Sbjct: 179 LAERIASFIDVEQSLPAAGQGAVGIECRTDDVAVQQLLAPLADAETTSCVLAERAMNHHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C+ I G+A + S LY +V + DG Sbjct: 239 QGGCQVPIGGYAVLRDSELYLRALVGSVDG 268 >gi|313110333|ref|ZP_07796223.1| porphobilinogen deaminase [Pseudomonas aeruginosa 39016] gi|310882725|gb|EFQ41319.1| porphobilinogen deaminase [Pseudomonas aeruginosa 39016] Length = 313 Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 109/270 (40%), Positives = 158/270 (58%), Gaps = 2/270 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ +N++D P+ GQGA+ IE + L++ ++H DT V ERA L Sbjct: 179 FESRIRSSINVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 +G C+ IA +A +G L+ G+V DG Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDG 268 >gi|157377265|ref|YP_001475865.1| porphobilinogen deaminase [Shewanella sediminis HAW-EB3] gi|189028158|sp|A8G0W4|HEM3_SHESH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157319639|gb|ABV38737.1| Hydroxymethylbilane synthase [Shewanella sediminis HAW-EB3] Length = 309 Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 112/306 (36%), Positives = 172/306 (56%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLAL A ++ L H+ + ++P+STKGD I + L ++GG Sbjct: 1 MSQNVIRIATRKSPLALWQAEFVKAELEKFHE--GLTVELLPMSTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +++ + Sbjct: 59 KGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNNYKNISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK Sbjct: 119 LPQGAVVGTSSLRRQCQIRASRPDLVIRDLRGNVGTRLGKLDAGNYDAIILAAAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I ++ E+ P+ GQGA+ IE +N+ + + L+ + H +T V ERA L Sbjct: 179 LEERITSFISAEESLPANGQGAVGIECRINDERVKALLAPLEHTETRHRVIAERAMNTHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + TL G+V DG E ++ G++ DA IG A+ + Sbjct: 239 EGGCQVPIGAYAEIQDDTLTLRGLVGNPDGSHIIEATKVGSKTDAQAIGVALAEELLSKG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKAILD 304 >gi|138896211|ref|YP_001126664.1| porphobilinogen deaminase [Geobacillus thermodenitrificans NG80-2] gi|196250167|ref|ZP_03148861.1| porphobilinogen deaminase [Geobacillus sp. G11MC16] gi|158513835|sp|A4IRG5|HEM3_GEOTN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|134267724|gb|ABO67919.1| Porphobilinogen deaminase [Geobacillus thermodenitrificans NG80-2] gi|196210351|gb|EDY05116.1| porphobilinogen deaminase [Geobacillus sp. G11MC16] Length = 309 Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 117/291 (40%), Positives = 175/291 (60%), Gaps = 7/291 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +G+R S LAL +T + ++ ++ P + + TKGDR+ + TL+++GGKGLF + Sbjct: 6 VGSRRSKLALT---QTNWVINELKRLGAPFTFEVKEIVTKGDRVLDVTLSKVGGKGLFVK 62 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE ++++G ID AVHS KDMP L GL I + RED+RDV +S SL DL +V Sbjct: 63 EIEHEMLTGGIDMAVHSMKDMPAVLPSGLVIGSVPRREDVRDVLVSKGNLSLSDLPSGAV 122 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVI 185 IGTSSLRR A LL +R D+++ RG I+TRL KL N AI+LA AG+ R+ + VI Sbjct: 123 IGTSSLRRSAQLLAYRPDVTIKWIRGNIDTRLAKLKNEDYDAIVLAAAGLARMGWSDDVI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ + P+ GQGA+ +E ++ + +E + +N E T +V ERAFL +++G C+ Sbjct: 183 SEYLSPDVCVPAVGQGALAVECREDDVELREWLSRLNDEQTERAVRAERAFLQQMEGGCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 IAG+A K ++ +V + DGK ++ G D +GR AA + Sbjct: 243 VPIAGYAEVKEGMVHLTALVASPDGKEKYKEIVIG--ADPEEVGRQAAALL 291 >gi|315497777|ref|YP_004086581.1| porphobilinogen deaminase [Asticcacaulis excentricus CB 48] gi|315415789|gb|ADU12430.1| porphobilinogen deaminase [Asticcacaulis excentricus CB 48] Length = 314 Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 112/274 (40%), Positives = 166/274 (60%), Gaps = 13/274 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDV--------HKIPPHNIVIIPLSTKGDRITNRTLTE 57 +IGTR S LA + ++ H++ P +VII +T+GDRI +R L E Sbjct: 5 LKIGTRGSRLATTQCGWVQRQIVTALGHDPALSHEVAP--LVII--TTQGDRIQDRRLIE 60 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 GGK LFT+EIE L+SGE+D AVHS KDMP + + GL + A+ RED RD F+S +S Sbjct: 61 AGGKQLFTKEIEDALLSGEVDVAVHSLKDMPAEDIPGLSLCAFPVREDPRDAFVSLKYRS 120 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+DL + +GT+SLRR+A L R D+ V+ RG ++TRL+KL A+LLA AG+K Sbjct: 121 LEDLPQGAKLGTASLRRQAQALAVRPDLEVVMLRGNVDTRLSKLEAGHCDAMLLAAAGLK 180 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ E IK ++ + FP +PGQGA+ I+ N+ QE +K ++H +T ++ ER L Sbjct: 181 RMGLEAHIKSYIDPDLFPCAPGQGALAIQCRTNDLD-QEWIKRLHHVETHLQISAERGAL 239 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 L+ SC++A+ +A +G L + L +DG+ Sbjct: 240 VALEASCRTAVGAYAKIEGDALTLFVEALTADGR 273 >gi|306815158|ref|ZP_07449311.1| porphobilinogen deaminase [Escherichia coli NC101] gi|34222567|sp|Q8FBP1|HEM3_ECOL6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|222035503|emb|CAP78248.1| Porphobilinogen deaminase [Escherichia coli LF82] gi|305851527|gb|EFM51981.1| porphobilinogen deaminase [Escherichia coli NC101] gi|312948358|gb|ADR29185.1| porphobilinogen deaminase [Escherichia coli O83:H1 str. NRG 857C] Length = 313 Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 113/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL L S Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDALPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294 >gi|90414241|ref|ZP_01222221.1| porphobilinogen deaminase [Photobacterium profundum 3TCK] gi|90324688|gb|EAS41229.1| porphobilinogen deaminase [Photobacterium profundum 3TCK] Length = 341 Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 108/306 (35%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M KP RI TR SPLA+ A ++ L H P + ++P+ TKGD I + L ++GG Sbjct: 32 MTDKPIRIATRKSPLAMWQAEFVQAELEKAH--PGLVVELVPMVTKGDIILDTPLAKVGG 89 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+T S+ + Sbjct: 90 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNTYNSIAE 149 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+ RL+ Sbjct: 150 LPAGSIVGTSSLRRQCQLRAQRPDLIINDLRGNVNTRLRKLDEGQYDAIILACAGLMRLE 209 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ + E+ P+ GQGA+ IE +++ + + L+ +NH +T + CERA L Sbjct: 210 MHDRIRSAIEPEESLPAVGQGAVGIECRLDDHRVRALLATLNHPETATRIFCERAMNNHL 269 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I ++ +G ++ +V DG G D +G A+ + Sbjct: 270 QGGCQVPIGSYSELQGDQIWLRALVGEPDGSKMVRGEITGAAIDGEALGTQLAEQLLADG 329 Query: 301 NKNVFN 306 K + + Sbjct: 330 AKEILD 335 >gi|254564213|ref|YP_003071308.1| Porphobilinogen deaminase [Methylobacterium extorquens DM4] gi|254271491|emb|CAX27506.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Methylobacterium extorquens DM4] Length = 294 Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 113/292 (38%), Positives = 164/292 (56%), Gaps = 3/292 (1%) Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74 +ALA R ++ + P I+ +ST DR+ +R L+EIGGKGLFT+E+E+ L + Sbjct: 1 MALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIGGKGLFTKELEQALFA 58 Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDLALHSVIGTSSLR 133 EID AVHS KD+ T L GL I+ L R+D RD F+S + A L DL + +GTSSLR Sbjct: 59 DEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADLPPGARVGTSSLR 118 Query: 134 RKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIED 193 R A +L R D++++ RG TR+ KL + A LLA AG++RL V + +L++E+ Sbjct: 119 RGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGMANVARSVLSVEE 178 Query: 194 FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY 253 P+ QGA+ IE + + L+ + T +++ ER LAELDGSC++ IA A Sbjct: 179 MLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELDGSCRTPIAALAQ 238 Query: 254 CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 G + G++ DG V R G DA IGRDA ++ + F Sbjct: 239 VSGDRISLDGLLFLPDGSRHWAVHREGLAADADAIGRDAGAELKRAAGDVYF 290 >gi|26250543|ref|NP_756583.1| porphobilinogen deaminase [Escherichia coli CFT073] gi|110644128|ref|YP_671858.1| porphobilinogen deaminase [Escherichia coli 536] gi|227888613|ref|ZP_04006418.1| hydroxymethylbilane synthase [Escherichia coli 83972] gi|300979364|ref|ZP_07174522.1| porphobilinogen deaminase [Escherichia coli MS 200-1] gi|300985714|ref|ZP_07177569.1| porphobilinogen deaminase [Escherichia coli MS 45-1] gi|301047316|ref|ZP_07194402.1| porphobilinogen deaminase [Escherichia coli MS 185-1] gi|26110973|gb|AAN83157.1|AE016769_272 Porphobilinogen deaminase [Escherichia coli CFT073] gi|110345720|gb|ABG71957.1| porphobilinogen deaminase [Escherichia coli 536] gi|227834452|gb|EEJ44918.1| hydroxymethylbilane synthase [Escherichia coli 83972] gi|300300835|gb|EFJ57220.1| porphobilinogen deaminase [Escherichia coli MS 185-1] gi|300308036|gb|EFJ62556.1| porphobilinogen deaminase [Escherichia coli MS 200-1] gi|300407988|gb|EFJ91526.1| porphobilinogen deaminase [Escherichia coli MS 45-1] gi|307555929|gb|ADN48704.1| porphobilinogen deaminase [Escherichia coli ABU 83972] gi|315293155|gb|EFU52507.1| porphobilinogen deaminase [Escherichia coli MS 153-1] gi|324007476|gb|EGB76695.1| porphobilinogen deaminase [Escherichia coli MS 57-2] gi|324014708|gb|EGB83927.1| porphobilinogen deaminase [Escherichia coli MS 60-1] Length = 320 Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 113/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL L S Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDALPAGS 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301 >gi|330908104|gb|EGH36623.1| porphobilinogen deaminase [Escherichia coli AA86] Length = 318 Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 11 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 69 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 129 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 189 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 248 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG + R G DA +G A+ + Sbjct: 249 VPIGSYAELIDGEIWLRALVGAPDGSLIIRGERRGAPQDAEQMGISLAEEL 299 >gi|312969469|ref|ZP_07783671.1| porphobilinogen deaminase [Escherichia coli 2362-75] gi|312286016|gb|EFR13934.1| porphobilinogen deaminase [Escherichia coli 2362-75] Length = 313 Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 113/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL L S Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDALPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294 >gi|222054398|ref|YP_002536760.1| porphobilinogen deaminase [Geobacter sp. FRC-32] gi|254800252|sp|B9M416|HEM3_GEOSF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|221563687|gb|ACM19659.1| porphobilinogen deaminase [Geobacter sp. FRC-32] Length = 318 Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 114/296 (38%), Positives = 166/296 (56%), Gaps = 3/296 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A +S L + P + ++ + T GD+I + L ++GG Sbjct: 1 MALKQLRIGTRASQLALWQANWVKSELE--QRYPGMEVSLVKIKTIGDKILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ G+ID AVHS KD+PT+ +GL + RED RD IS + D Sbjct: 59 KGLFVKEIEEAMLRGDIDIAVHSMKDVPTEFPEGLGLHCITEREDPRDAVISRGTK-FAD 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A LL+ R D+ ++ RG +ETR+NKL K A++LA AG+KRL Sbjct: 118 LPQGAKIGTSALRRQAQLLKVRPDMEMVIIRGNVETRINKLETEKLDAVILAAAGLKRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + E L + P+ GQGA+ IE ++N + ++ + NH T +V ERA L Sbjct: 178 FTEKVAEYLPTDLSIPAIGQGALGIECRLDNEEVKQTIDFFNHPATAYAVRAERALLWRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IA F GS L G + + DGK + G D +G A+ + Sbjct: 238 EGGCQVPIAAFGEVTGSDLKLVGFIASVDGKTSVRGTITGPAADCEKLGIKLAEQL 293 >gi|91213326|ref|YP_543312.1| porphobilinogen deaminase [Escherichia coli UTI89] gi|117626062|ref|YP_859385.1| porphobilinogen deaminase [Escherichia coli APEC O1] gi|237702812|ref|ZP_04533293.1| porphobilinogen deaminase [Escherichia sp. 3_2_53FAA] gi|91074900|gb|ABE09781.1| porphobilinogen deaminase [Escherichia coli UTI89] gi|115515186|gb|ABJ03261.1| porphobilinogen deaminase [Escherichia coli APEC O1] gi|226902983|gb|EEH89242.1| porphobilinogen deaminase [Escherichia sp. 3_2_53FAA] gi|294490567|gb|ADE89323.1| porphobilinogen deaminase [Escherichia coli IHE3034] gi|307628866|gb|ADN73170.1| porphobilinogen deaminase [Escherichia coli UM146] gi|315284723|gb|EFU44168.1| porphobilinogen deaminase [Escherichia coli MS 110-3] Length = 320 Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 113/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL L S Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICKREDPRDAFVSNTYDSLDALPAGS 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301 >gi|215489131|ref|YP_002331562.1| porphobilinogen deaminase [Escherichia coli O127:H6 str. E2348/69] gi|215267203|emb|CAS11651.1| hydroxymethylbilane synthase HemC [Escherichia coli O127:H6 str. E2348/69] Length = 320 Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 113/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL L S Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDALPAGS 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301 >gi|331649629|ref|ZP_08350711.1| hydroxymethylbilane synthase [Escherichia coli M605] gi|331041499|gb|EGI13647.1| hydroxymethylbilane synthase [Escherichia coli M605] Length = 320 Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG + R G DA +G A+ + Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSLIIRGERRGAPQDAEQMGISLAEEL 301 >gi|57239097|ref|YP_180233.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden] gi|58579044|ref|YP_197256.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden] gi|57161176|emb|CAH58090.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden] gi|58417670|emb|CAI26874.1| Porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden] Length = 299 Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 116/296 (39%), Positives = 171/296 (57%), Gaps = 9/296 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +GTR S LA+A A E + L + P N+ I+ + T GD +L+EIGG Sbjct: 1 MNSMNVYVGTRGSILAIAQAMEVKKLLYNYF--PDINVQIVHIVTSGDINDKISLSEIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L++G ID AVHS KD+P L I L R DVFIS QSL+ Sbjct: 59 KGLFLKELEEALLTGTIDLAVHSMKDVPAFYCDSLVIPCILKRSSPYDVFISSKYQSLRS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++VIGTSS+RRK L+R S + V+ RG ++TR+ KL + I+LA AG+ R+ Sbjct: 119 LPDNAVIGTSSIRRKVQLMRLLSSVQVVPIRGNVDTRILKLEAGQYDGIILAKAGLMRIN 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K VIKE+L+ + + GQGAI I+ N+ K +++K++N + ++ SV ER+F+ + Sbjct: 179 KTHVIKEVLDPQVMLSAVGQGAIGIQCRANDYKMIDMIKILNCKKSYISVAAERSFMKTV 238 Query: 241 DGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA----INIGRD 291 +GSC + +A A Y TLY ++ + +F + N CDA IN+G D Sbjct: 239 NGSCDTPLAALAKYVNSDTLYMSCMLSNEEKTVFSDCYF--NECDAEISGINMGND 292 >gi|300714797|ref|YP_003739600.1| Porphobilinogen deaminase [Erwinia billingiae Eb661] gi|299060633|emb|CAX57740.1| Porphobilinogen deaminase [Erwinia billingiae Eb661] Length = 313 Score = 198 bits (503), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 112/289 (38%), Positives = 160/289 (55%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG Sbjct: 1 MLDKILRIATRQSPLALWQAHYVQQRLMACH--PGLRVELVPMVTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ D AVHS KD+P +GL + RED D F+S+ S+ Sbjct: 59 KGLFVKELEQAMLEDRADIAVHSMKDVPIAFPEGLGLVTICEREDPLDAFVSNQYDSVDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPQGAVVGTSSLRRQCQLSARRPDLIIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ + E+ P+ GQGA+ IE +++ +A L+ +N +DT V ERA L Sbjct: 179 LGDRIRYAMPAEESLPAVGQGAVGIECRLDDAQAIALLSALNDDDTAIRVKAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I FA +G L+ G+V + DG R G R DA +G Sbjct: 239 EGGCQVPIGSFALLQGDELWLRGLVGSPDGTAMIRGERRGPRADAEKMG 287 >gi|218560868|ref|YP_002393781.1| porphobilinogen deaminase [Escherichia coli S88] gi|218692081|ref|YP_002400293.1| porphobilinogen deaminase [Escherichia coli ED1a] gi|226740633|sp|B7MH66|HEM3_ECO45 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800250|sp|B7N295|HEM3_ECO81 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|218367637|emb|CAR05420.1| hydroxymethylbilane synthase [Escherichia coli S88] gi|218429645|emb|CAR10466.1| hydroxymethylbilane synthase [Escherichia coli ED1a] gi|323949314|gb|EGB45204.1| porphobilinogen deaminase [Escherichia coli H252] gi|323954009|gb|EGB49807.1| porphobilinogen deaminase [Escherichia coli H263] Length = 313 Score = 198 bits (503), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 113/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL L S Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICKREDPRDAFVSNTYDSLDALPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294 >gi|330444901|ref|ZP_08308556.1| porphobilinogen deaminase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489211|dbj|GAA03053.1| porphobilinogen deaminase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 310 Score = 198 bits (503), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 108/306 (35%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +P RI TR SPLA+ A ++ L H P + ++P+ TKGD I + L ++GG Sbjct: 1 MTSQPIRIATRKSPLAMWQAEFVKAELEQAH--PGIVVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ ++ + Sbjct: 59 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNKYNNIDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ + R D+ V D RG + TRL KL++ + AI+LA AG+KRLK Sbjct: 119 LPQGAIVGTSSLRRQCQIRAQRPDLIVNDLRGNVNTRLRKLDDGEYDAIILACAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ + E P+ GQGA+ IE +++ + ++L+ +NH+ T V CERA L Sbjct: 179 MDDRIRSEIAPETSLPAVGQGAVGIECRLDDTRVRQLLDALNHQPTATRVLCERAMNNRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ +V DG G A +G A + Sbjct: 239 QGGCQVPIGSYALLEGDEIWLRALVGEPDGSKIVRAEIRGPIAQAEQLGTTLADQLLADG 298 Query: 301 NKNVFN 306 K++ + Sbjct: 299 AKDILD 304 >gi|323964049|gb|EGB59539.1| porphobilinogen deaminase [Escherichia coli M863] gi|327250654|gb|EGE62360.1| porphobilinogen deaminase [Escherichia coli STEC_7v] Length = 313 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 113/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +N+ + +EL+ +NH +T V ERA L+G C+ Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLNDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294 >gi|281180853|dbj|BAI57183.1| porphobilinogen deaminase [Escherichia coli SE15] Length = 313 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG + R G DA +G A+ + Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSLIIRGERRGAPQDAEQMGISLAEEL 294 >gi|83590097|ref|YP_430106.1| porphobilinogen deaminase [Moorella thermoacetica ATCC 39073] gi|123766782|sp|Q2RJ26|HEM3_MOOTA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|83573011|gb|ABC19563.1| hydroxymethylbilane synthase [Moorella thermoacetica ATCC 39073] Length = 313 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 116/292 (39%), Positives = 166/292 (56%), Gaps = 4/292 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 ++G+R S LA ++ R + + K P + ++ L TKGD+I + L IG KGLF Sbjct: 4 IKVGSRESELA---RWQARWVIQALEKAWPGLSCRLVTLKTKGDKILDVALARIGDKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E L+ G ID AVHS KDMPT L +GL I A PRED DV +S +L L + Sbjct: 61 TKELELALLDGAIDLAVHSMKDMPTTLPEGLVIGAIGPREDPADVLVSPEGYTLATLPIK 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRRKA L R D+ ++D RG + TRL K+ + AI+LA AG+KRL +V Sbjct: 121 ARVGTSSLRRKAQLAYARPDLELVDLRGNVPTRLAKMERDGLTAIVLAAAGLKRLNHGQV 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E + P+ GQGAI +E + + ELV INH T +V ERA+L L+G C Sbjct: 181 LGEPIPYHICLPAVGQGAIGVEIRAGDRRVAELVAAINHPPTAAAVRAERAYLRALEGGC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + IA A + + L G+V + DG+ +G+ D GR+ A+ + Sbjct: 241 QVPIAALATVEDTALVLQGMVASLDGREMLRDIASGSTRDPEAAGRELARKL 292 >gi|260767548|ref|ZP_05876484.1| porphobilinogen deaminase [Vibrio furnissii CIP 102972] gi|260617448|gb|EEX42631.1| porphobilinogen deaminase [Vibrio furnissii CIP 102972] Length = 312 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 109/302 (36%), Positives = 167/302 (55%), Gaps = 2/302 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RI TR SPLAL A + +L H P + ++ + T+GD I + L ++GGKGLF Sbjct: 6 PIRIATRQSPLALWQAHFVKDALQAAH--PGLEVELVTMVTRGDVILDTPLAKVGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T SL +L Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYASLDELPHG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +++GT SLRR+ L R D+ + + RG + TRL KL+ + AI+LA AG+KRL+ E+ Sbjct: 124 AIVGTCSLRRQCQLKEARPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLQLEQR 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ ++ E P+ GQGA+ IE +++ + + L+ ++ DT D V CERA L+G C Sbjct: 184 IRSLIEPEQSLPAVGQGAVGIECRLDDARLRALLAPLSDADTTDRVLCERAMNLTLEGGC 243 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I +A G L+ +V DG G R DA +G + A + +++ Sbjct: 244 QVPIGSYALLDGDDLWLRALVGEPDGSHIVRGEIRGPRQDAERLGVELANQLLADGARDI 303 Query: 305 FN 306 Sbjct: 304 LT 305 >gi|254435152|ref|ZP_05048659.1| porphobilinogen deaminase [Nitrosococcus oceani AFC27] gi|207088263|gb|EDZ65535.1| porphobilinogen deaminase [Nitrosococcus oceani AFC27] Length = 314 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 116/268 (43%), Positives = 157/268 (58%), Gaps = 2/268 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR S LAL A +L H P NI ++ +ST+GD+I + L +IGGKG Sbjct: 8 KTCLRIATRKSLLALWQAEYVADTLR--HHYPDLNIELVRMSTQGDKILDTPLAKIGGKG 65 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E+ L SGE D AVHS KD+P L + L I+ R D RD F+S+ Q L L Sbjct: 66 LFIKELEQGLFSGEADIAVHSMKDVPVDLPENLHIAVICQRGDPRDAFVSNHWQDLDSLP 125 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR++ + R D V+D RG + TRL KL+NN+ AI+LA AG+KRL+ Sbjct: 126 EGARVGTSSLRRQSQVRERRPDFQVLDLRGNVNTRLAKLDNNEFDAIILAAAGLKRLELT 185 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+E L E P+ GQGAI IE + +EL+KV+ H T ++ ERA A L G Sbjct: 186 QRIRESLAPEVSLPAIGQGAIGIECRKGDTATEELIKVLEHPPTRITIRAERALNARLAG 245 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270 C+ IAG+A + L +V DG Sbjct: 246 GCQVPIAGYAELEDERLRLRALVGQPDG 273 >gi|331685522|ref|ZP_08386106.1| hydroxymethylbilane synthase [Escherichia coli H299] gi|331077223|gb|EGI48437.1| hydroxymethylbilane synthase [Escherichia coli H299] Length = 313 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG + R G DA +G A+ + Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSLIIRGERRGAPQDAEQMGISLAEEL 294 >gi|77164030|ref|YP_342555.1| porphobilinogen deaminase [Nitrosococcus oceani ATCC 19707] gi|76882344|gb|ABA57025.1| hydroxymethylbilane synthase [Nitrosococcus oceani ATCC 19707] Length = 310 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 116/268 (43%), Positives = 157/268 (58%), Gaps = 2/268 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR S LAL A +L H P NI ++ +ST+GD+I + L +IGGKG Sbjct: 4 KTCLRIATRKSLLALWQAEYVADTLR--HHYPDLNIELVRMSTQGDKILDTPLAKIGGKG 61 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E+ L SGE D AVHS KD+P L + L I+ R D RD F+S+ Q L L Sbjct: 62 LFIKELEQGLFSGEADIAVHSMKDVPVDLPENLHIAVICQRGDPRDAFVSNHWQDLDSLP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR++ + R D V+D RG + TRL KL+NN+ AI+LA AG+KRL+ Sbjct: 122 EGARVGTSSLRRQSQVRERRPDFQVLDLRGNVNTRLAKLDNNEFDAIILAAAGLKRLELT 181 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+E L E P+ GQGAI IE + +EL+KV+ H T ++ ERA A L G Sbjct: 182 QRIRESLAPEVSLPAIGQGAIGIECRKGDTATEELIKVLEHPPTRITIRAERALNARLAG 241 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270 C+ IAG+A + L +V DG Sbjct: 242 GCQVPIAGYAELEDERLRLRALVGQPDG 269 >gi|261418339|ref|YP_003252021.1| porphobilinogen deaminase [Geobacillus sp. Y412MC61] gi|297529191|ref|YP_003670466.1| porphobilinogen deaminase [Geobacillus sp. C56-T3] gi|319767702|ref|YP_004133203.1| porphobilinogen deaminase [Geobacillus sp. Y412MC52] gi|261374796|gb|ACX77539.1| porphobilinogen deaminase [Geobacillus sp. Y412MC61] gi|297252443|gb|ADI25889.1| porphobilinogen deaminase [Geobacillus sp. C56-T3] gi|317112568|gb|ADU95060.1| porphobilinogen deaminase [Geobacillus sp. Y412MC52] Length = 310 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 116/291 (39%), Positives = 175/291 (60%), Gaps = 7/291 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +G+R S LAL +T+ + ++ ++ P + + TKGDR+ + TL+++GGKGLF + Sbjct: 6 VGSRRSKLALT---QTKWVINELKQLGAPFTFEVKEIVTKGDRVLDVTLSKVGGKGLFVK 62 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE +L++G ID AVHS KDMP L +GL I A RED RDV +S + L DL SV Sbjct: 63 EIEHELLAGGIDMAVHSMKDMPAVLPEGLVIGAVPRREDARDVLVSKGNRMLSDLPPGSV 122 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVI 185 IGTSSLRR A LL +R D+++ RG I+TRL KL + + AI+LA AG+ R+ + VI Sbjct: 123 IGTSSLRRSAQLLAYRPDLTIKWIRGNIDTRLAKLESEEYDAIVLAAAGLARMGWGDDVI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L + P+ GQGA+ +E ++ + ++ + +N E T +V ERAFL +++G C+ Sbjct: 183 SDYLPFDVCVPAVGQGALAVECREDDDELRQWLSRLNDEQTERAVRAERAFLQQMEGGCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 IAG+A G + +V + DGK ++ G D +GR AA + Sbjct: 243 VPIAGYAEADGGMVRLTALVASPDGKEKYKEMVTG--ADPEAVGRQAAAVL 291 >gi|260771623|ref|ZP_05880543.1| porphobilinogen deaminase [Vibrio metschnikovii CIP 69.14] gi|260613400|gb|EEX38599.1| porphobilinogen deaminase [Vibrio metschnikovii CIP 69.14] Length = 312 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 112/303 (36%), Positives = 167/303 (55%), Gaps = 4/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-IIPLSTKGDRITNRTLTEIGGKGL 63 P RI TR SPLAL A + +L H PH V ++ + T+GD + + L ++GGKGL Sbjct: 6 PIRIATRQSPLALWQAHFVKDALQAAH---PHLAVELVTMVTRGDVLLDTPLAKVGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++ G D AVHS KD+P GL + RED RD F+S+T SL+ L Sbjct: 63 FVKELEVAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYHSLEALPH 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GT SLRR+ + R DI + + RG + TRL KL+ + AI+LA AG+KRLK E+ Sbjct: 123 GAIVGTCSLRRQCQIKAARPDIIIKELRGNVGTRLAKLDAGEFDAIVLAAAGLKRLKLEQ 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I ++ E P+ GQGA+ IE +++ + L++ +NH DT+D V CERA L G Sbjct: 183 RIASFISPEQSLPAVGQGAVGIECRLDDQRLLTLLEPLNHADTYDRVICERAMNLTLQGG 242 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I + G ++ +V DG G R A +G + AQ + ++ Sbjct: 243 CQVPIGSYTELDGEQIWLRALVGEPDGSRIIRGEIRGPRQQAERLGVELAQQLLDQGARD 302 Query: 304 VFN 306 + N Sbjct: 303 ILN 305 >gi|288940050|ref|YP_003442290.1| porphobilinogen deaminase [Allochromatium vinosum DSM 180] gi|288895422|gb|ADC61258.1| porphobilinogen deaminase [Allochromatium vinosum DSM 180] Length = 308 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 110/284 (38%), Positives = 166/284 (58%), Gaps = 2/284 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLA+ A + L +H P + II ++TKGD++ + L+++GGKGLF Sbjct: 5 IRIATRKSPLAMWQAEHVTARLKALH--PGLTVEIIGMTTKGDQLLDSPLSKVGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ +++GE D AVHS KD+P + +GL ++ + RE+ D F+S+T +L +L + Sbjct: 63 KELEQGMLAGEADIAVHSMKDVPVEFPEGLHLAVIMERENPYDAFVSNTYANLAELPEGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+ RL E I Sbjct: 123 CVGTSSLRRQCQLADRRPDLRIEPLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFESRI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ ++ D P+ GQGAI IE V++ + +L+ + DT D V ERA A L+G C+ Sbjct: 183 RDCIDPVDSLPAIGQGAIGIECRVDDERVHQLIAPLADRDTTDRVLAERAMNARLNGGCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 I G A G L G+V +DG +G R +A IG Sbjct: 243 VPIGGHAVLDGDRLILKGLVGTTDGSRILRAEASGPRAEAEAIG 286 >gi|170680193|ref|YP_001746121.1| porphobilinogen deaminase [Escherichia coli SMS-3-5] gi|170517911|gb|ACB16089.1| porphobilinogen deaminase [Escherichia coli SMS-3-5] Length = 318 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 11 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +SL L S Sbjct: 69 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYESLDALPAGS 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 129 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 189 RAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 248 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 249 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 299 >gi|87118400|ref|ZP_01074299.1| porphobilinogen deaminase [Marinomonas sp. MED121] gi|86166034|gb|EAQ67300.1| porphobilinogen deaminase [Marinomonas sp. MED121] Length = 308 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 111/289 (38%), Positives = 168/289 (58%), Gaps = 2/289 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A + SL ++ P + ++ ++TKGD+I N L++IGGKGLF +E Sbjct: 7 IATRESQLALWQANNVKDSLAALY--PDIQVELLGMTTKGDQILNSPLSKIGGKGLFVKE 64 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L+ G D AVHS KD+P +GL ++ RED D F+S+ +L L +V+ Sbjct: 65 LEHALLDGRADIAVHSMKDVPMAFPEGLGLAVICEREDPTDAFVSNKYDNLASLPQGAVV 124 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR + L R D+ + D RG + TRL KL+N + AI+LA AG+ RL+ IKE Sbjct: 125 GTSSLRRSSQLALARPDLVIKDLRGNVNTRLRKLDNQEYDAIILATAGLMRLEMTDRIKE 184 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 ++ +D P+ GQGA+ IE ++ +L+ + H++T+ V ERA L+G C++ Sbjct: 185 RISDQDSLPAGGQGAMGIECRSDDADMIKLLAPLQHQETYYRVTAERAVNERLNGGCQAP 244 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 IA F+ +G LY G+V + DG G++ DA +G A+ + Sbjct: 245 IAAFSLLEGDELYLRGLVGSVDGSTILRDEIRGSKNDAHALGVQLAEKL 293 >gi|127511252|ref|YP_001092449.1| porphobilinogen deaminase [Shewanella loihica PV-4] gi|126636547|gb|ABO22190.1| porphobilinogen deaminase [Shewanella loihica PV-4] Length = 317 Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 109/289 (37%), Positives = 166/289 (57%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L H+ + ++P+STKGD I + L ++GG Sbjct: 9 MSQNVIRIATRKSPLAMWQAEFVKAELEKAHE--GLVVELLPMSTKGDVILDTPLAKVGG 66 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G+ D AVHS KD+P +GL + RED RD F+S+T +++++ Sbjct: 67 KGLFVKELEVAMLEGKADIAVHSMKDVPVDFPEGLGLQVICEREDPRDAFVSNTYKNIEE 126 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK Sbjct: 127 LPQGAIVGTSSLRRQCQIRAARPDLEIRDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLK 186 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++ ED P+ GQGA+ IE ++ + + L+ + H +T V ERA L Sbjct: 187 LEDRIASFISAEDSLPANGQGAVGIECRTDDERVKALLAPLEHIETRYRVIAERAMNTRL 246 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I +A G TL G+V DG + +G + DA +G Sbjct: 247 EGGCQVPIGAYAEIDGDTLSLRGLVGNPDGSQVIRGTTSGAKQDAEQLG 295 >gi|21674248|ref|NP_662313.1| porphobilinogen deaminase [Chlorobium tepidum TLS] gi|25453021|sp|Q8KCJ4|HEM3_CHLTE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|21647416|gb|AAM72655.1| porphobilinogen deaminase [Chlorobium tepidum TLS] Length = 312 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 113/269 (42%), Positives = 159/269 (59%), Gaps = 2/269 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK IGTR SPLAL A T++ L P NI + + T GD + + L++IG G Sbjct: 2 KKELIIGTRSSPLALWQAEFTKAEL--SRHFPELNITLKLVKTTGDVLLDSPLSKIGDMG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT++IEK L++ EID AVHS KD+PT +GL IS++ RED RDV IS + + LKDL Sbjct: 60 LFTKDIEKHLLAKEIDLAVHSLKDVPTGTPEGLVISSFTKREDTRDVIISKSGKGLKDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ + TSSLRR + LL R D+ ++D RG + TR K ++ + A++LAYAG+ RL+ Sbjct: 120 PNARMATSSLRRMSQLLSMRPDLQILDIRGNLNTRFKKFDDGEFDAMMLAYAGVYRLEFS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EIL + P+ GQGA+ IET ++ + E+V+V+N +T ERA L L G Sbjct: 180 DRISEILPHDVMLPAVGQGALGIETRTDDAETIEIVRVMNDSNTEICCRAERALLRHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 C+ I + TL V + DGK Sbjct: 240 GCQIPIGCYGSYISGTLKLLAFVGSVDGK 268 >gi|188996629|ref|YP_001930880.1| porphobilinogen deaminase [Sulfurihydrogenibium sp. YO3AOP1] gi|188931696|gb|ACD66326.1| porphobilinogen deaminase [Sulfurihydrogenibium sp. YO3AOP1] Length = 310 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 103/270 (38%), Positives = 166/270 (61%), Gaps = 3/270 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A L ++H I + ++ ++T+GD+I + L +IGGKGLF Sbjct: 3 IRIGTRKSQLALWQANYIADRLREIHGI---EVELVKITTQGDKILDVPLAKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L+ EID AVHS KD+PT L +GL++ A RED RD F+S +++ L ++ Sbjct: 60 KEIEDALLRNEIDIAVHSLKDVPTVLPEGLELIAITEREDPRDAFLSIRYENIYQLPENT 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSSLRRK+ +++ R D+ + D RG ++TR+ KL + AI+LAYAG+KRL + + Sbjct: 120 VIGTSSLRRKSQIMKIRKDLQIKDLRGNVDTRIRKLEEGQYDAIILAYAGLKRLGLDSKV 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 K I + ++ P+ QG + IE ++ + + L+K +NH +++ ER+FL L+G C+ Sbjct: 180 KYIFSPDEMIPAVCQGFLAIEGRSDDERIKNLIKPLNHYESYLRATAERSFLKTLEGGCQ 239 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275 + + K ++ G + +GK +++ Sbjct: 240 VPLGAYCEIKENSFIITGFIADLEGKEYYQ 269 >gi|238798585|ref|ZP_04642061.1| Porphobilinogen deaminase [Yersinia mollaretii ATCC 43969] gi|238717541|gb|EEQ09381.1| Porphobilinogen deaminase [Yersinia mollaretii ATCC 43969] Length = 313 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 114/289 (39%), Positives = 159/289 (55%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S L D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSSHYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH DT V ERA L Sbjct: 179 LETRIRYAMPAEESLPAVGQGAVGIECRLDDDVTRQLLAPLNHRDTELRVCAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I +A G L+ +V A DG R G +A +G Sbjct: 239 EGGCQVPIGSYAELAGGELWLRALVGAPDGSEIIRGERRGPAENAEQMG 287 >gi|50083560|ref|YP_045070.1| porphobilinogen deaminase [Acinetobacter sp. ADP1] gi|55976395|sp|Q6FFA9|HEM3_ACIAD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|49529536|emb|CAG67248.1| porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Acinetobacter sp. ADP1] Length = 311 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 111/270 (41%), Positives = 156/270 (57%), Gaps = 2/270 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +I TR SPLAL A R L ++ P + ++ T+GD+I + L +IGGKGL Sbjct: 7 QTLKIATRQSPLALWQAEHIRDRLQALY--PELKVELVKFVTQGDKILDTPLAKIGGKGL 64 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ S L L Sbjct: 65 FVKELEAALLDGRADLAVHSMKDVPMHLPEGLSLAVICEREDPLDAFVSNHVMSFDQLPL 124 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL Sbjct: 125 GARVGTSSLRRKCQILKQRPDLEIIDLRGNVGTRLAKLDDGQYDAIVLASAGLKRLGLIS 184 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ +N E P+ GQGA+ +E N+ K +L+ + H+ T V ERAF A L+G Sbjct: 185 RIRHSINAEISLPAVGQGALGLECRANDKKILDLIAPLAHQPTSACVRAERAFNAYLEGG 244 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 C+ IAGFA L G V + DGK Sbjct: 245 CQVPIAGFATLTQECLTLEGRVGSVDGKTL 274 >gi|308273123|emb|CBX29726.1| Porphobilinogen deaminase [uncultured Desulfobacterium sp.] Length = 323 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 123/309 (39%), Positives = 168/309 (54%), Gaps = 8/309 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ IGTR S LAL A +S L V K ++ + + TKGDRI + L ++GGKG Sbjct: 17 KRKIIIGTRGSKLALWQAEWVKSYL--VQKFTDLSVELKIIKTKGDRILDVALAKVGGKG 74 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L ID AVHS KDMP L GL I A RE+ RDV IS L L Sbjct: 75 LFVKEIEQSLADSSIDIAVHSMKDMPADLHDGLCIGAIPERENPRDVLISGKGLLLSQLP 134 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A + R R D+ + RG ++TR+NKL + AI+LA AG+KRL E Sbjct: 135 EGALVGTSSLRRIAQIKRIRPDLVIAPLRGNLDTRINKLEMGEIDAIILAAAGVKRLGLE 194 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 K+I E LN + P+ GQGA+CIE ++ + +NH T V ERAFL ++G Sbjct: 195 KIITEYLNEDTMLPAVGQGALCIEIRKDDHDISGFINEMNHFVTRAVVLGERAFLKRIEG 254 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI------ 296 C+ IAG+ + G+V DGK ++ G+ + +IG A + Sbjct: 255 GCQVPIAGYGKVENDIFIIRGLVADPDGKTIITDTQRGSLESSESIGAALADRLISMGAK 314 Query: 297 RFISNKNVF 305 R + N NV Sbjct: 315 RLLDNLNVL 323 >gi|152972793|ref|YP_001337939.1| porphobilinogen deaminase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|166217775|sp|A6TGI8|HEM3_KLEP7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|150957642|gb|ABR79672.1| porphobilinogen deaminase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 313 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 110/289 (38%), Positives = 164/289 (56%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +I TR SPLAL A ++ L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLKVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + R+D RD F+S+ S+ + Sbjct: 59 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNRYASIDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+++ RG + TRL+KL+N + AI+LA AG+KRL+ Sbjct: 119 LPAGSVVGTSSLRRQCQLAATRPDLAIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLQ 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L+ E P+ GQGA+ IE +++ + L+ +NH +T V ERA L Sbjct: 179 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTRGLLAPLNHTETAVRVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I +A K L+ +V A DG R G A +G Sbjct: 239 EGGCQVPIGSYAELKDGELWLRALVGAPDGSQLVRGERRGPAEQAEALG 287 >gi|116053408|ref|YP_793733.1| porphobilinogen deaminase [Pseudomonas aeruginosa UCBPP-PA14] gi|122256573|sp|Q02EA3|HEM3_PSEAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|115588629|gb|ABJ14644.1| porphobilinogen deaminase [Pseudomonas aeruginosa UCBPP-PA14] Length = 313 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/270 (40%), Positives = 158/270 (58%), Gaps = 2/270 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHSDTALRVTAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 +G C+ IA +A +G L+ G+V DG Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDG 268 >gi|300939977|ref|ZP_07154605.1| porphobilinogen deaminase [Escherichia coli MS 21-1] gi|300455181|gb|EFK18674.1| porphobilinogen deaminase [Escherichia coli MS 21-1] Length = 320 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +SL L S Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYESLDALPAGS 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301 >gi|238892405|ref|YP_002917139.1| porphobilinogen deaminase [Klebsiella pneumoniae NTUH-K2044] gi|329997497|ref|ZP_08302799.1| hydroxymethylbilane synthase [Klebsiella sp. MS 92-3] gi|238544721|dbj|BAH61072.1| porphobilinogen deaminase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328539065|gb|EGF65104.1| hydroxymethylbilane synthase [Klebsiella sp. MS 92-3] Length = 318 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 110/289 (38%), Positives = 164/289 (56%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +I TR SPLAL A ++ L H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLKVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + R+D RD F+S+ S+ + Sbjct: 64 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNRYASIDE 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+++ RG + TRL+KL+N + AI+LA AG+KRL+ Sbjct: 124 LPAGSVVGTSSLRRQCQLAATRPDLAIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLQ 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L+ E P+ GQGA+ IE +++ + L+ +NH +T V ERA L Sbjct: 184 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTRGLLAPLNHTETAVRVRAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I +A K L+ +V A DG R G A +G Sbjct: 244 EGGCQVPIGSYAELKDGELWLRALVGAPDGSQLVRGERRGPAEQAEALG 292 >gi|156935870|ref|YP_001439786.1| porphobilinogen deaminase [Cronobacter sakazakii ATCC BAA-894] gi|166217766|sp|A7MQJ1|HEM3_ENTS8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|156534124|gb|ABU78950.1| hypothetical protein ESA_03753 [Cronobacter sakazakii ATCC BAA-894] Length = 313 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 109/284 (38%), Positives = 161/284 (56%), Gaps = 2/284 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAQYVKQRLEACH--PGLTVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ +SL ++ S Sbjct: 64 KELELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQYKSLDEMPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ + R D+ + RG + TRL+KL+N AI+LA AG+KRL+ + I Sbjct: 124 IVGTSSLRRQCQIAARRPDLIIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLQLDARI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L E P+ GQGA+ IE +++ + +EL+ +NHE+T V ERA L+G C+ Sbjct: 184 TSPLAPEISLPAVGQGAVGIECRLDDTRTRELLAPLNHEETAVRVRAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 I +A + L+ +V A DG R G DA +G Sbjct: 244 VPIGSYAELRDGELWLRALVGAPDGSRIVRGERRGAPEDARQLG 287 >gi|221633109|ref|YP_002522334.1| porphobilinogen deaminase [Thermomicrobium roseum DSM 5159] gi|221155998|gb|ACM05125.1| porphobilinogen deaminase [Thermomicrobium roseum DSM 5159] Length = 560 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 104/270 (38%), Positives = 160/270 (59%), Gaps = 3/270 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LALA E L + +P ++ ++P+ T GDR +LT +GG G+F Sbjct: 5 IRIGSRGSTLALAQTEEVVERLRRL--VPECSVTVVPIVTTGDRDRATSLTVLGGSGVFA 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+ + L++G ID AVHSAKD+PT+L GL + A L RED RDV ++ + L +L + Sbjct: 63 KELHEALLAGTIDLAVHSAKDLPTQLPPGLVLVAVLAREDARDVLVTSPPRKLGELPAGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS RR+ALL R R D+ V+D RG ++TRL KL A++L AG++RL + ++ Sbjct: 123 RVGTSSRRRQALLQRARPDLIVVDIRGNVDTRLRKLREGIVDALVLGAAGLRRLSQADLV 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ ++F P+PGQGA+ + ++ + EL+ ++ ++V ERAFLA C Sbjct: 183 AEYLDPDEFVPAPGQGALAVVARESDGR-LELLSRLDEPLVHEAVAVERAFLAAFGSGCS 241 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275 + +A G+ L F VL DG+ + Sbjct: 242 VPLGAYATIAGNRLRFRIAVLLPDGRFISQ 271 >gi|296392119|ref|ZP_06881594.1| porphobilinogen deaminase [Pseudomonas aeruginosa PAb1] Length = 313 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/270 (40%), Positives = 158/270 (58%), Gaps = 2/270 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSALHALLEPLHHTDTALRVTAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 +G C+ IA +A +G L+ G+V DG Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDG 268 >gi|16767209|ref|NP_462824.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194449507|ref|YP_002047954.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|207859144|ref|YP_002245795.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|6960263|gb|AAF33453.1| 89% identity with E. coli porphobilinogen deaminase (HEMC) (SP:P06983); contains similarity to Pfam family PF01379 (Porphobilinogen deaminase), score=627.8, E=6.2e-185, N=1 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16422502|gb|AAL22783.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194407811|gb|ACF68030.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|206710947|emb|CAR35314.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261249062|emb|CBG26922.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996216|gb|ACY91101.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160454|emb|CBW19983.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|320088349|emb|CBY98109.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|323132286|gb|ADX19716.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326625658|gb|EGE32003.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332990774|gb|AEF09757.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 318 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 158/291 (54%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 11 LRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGGKGLFV 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL DL S Sbjct: 69 KELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGS 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL E I Sbjct: 129 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRI 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L+G C+ Sbjct: 189 RTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGCQ 248 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG + R G+ A +G A+ + Sbjct: 249 VPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEEL 299 >gi|94987453|ref|YP_595386.1| porphobilinogen deaminase [Lawsonia intracellularis PHE/MN1-00] gi|123262097|sp|Q1MPL2|HEM3_LAWIP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|94731702|emb|CAJ55065.1| Porphobilinogen deaminase [Lawsonia intracellularis PHE/MN1-00] Length = 309 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 117/287 (40%), Positives = 162/287 (56%), Gaps = 3/287 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LA A + L ++ ++++I TKGD I + L ++GGKGL Sbjct: 2 KKITIATRGSKLAFWQANYIKDQLQKMYSYLEVDLMVI--KTKGDHILDVPLAKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+SGE DCAVHS KD+P +L L ++A RED D+F+S +K L Sbjct: 60 FVKEIEEALLSGEADCAVHSMKDVPMELPFELCLAAITEREDPTDMFLSIKYSGVKSLPE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++++GTSSLRR+A LL R D+ +I RG I+TRL KL + AI++A AGIKRL Sbjct: 120 NALVGTSSLRRQAQLLALRPDLQIIPLRGNIDTRLRKLMAEEFDAIIMATAGIKRLGLIA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 L P+ GQGA+ IE EL +NH++T+ + ER FLA LDG Sbjct: 180 PYMSSLPCSVMLPAVGQGALGIEVQKERQDVLELFSFLNHKETYHCIQAERDFLAGLDGG 239 Query: 244 CKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 C+ IAG+A CK T+ G+V SDG + + DA +IG Sbjct: 240 CQVPIAGYATICKQETICLEGLVAKSDGSVMIRNRLERSVSDAYDIG 286 >gi|239502040|ref|ZP_04661350.1| porphobilinogen deaminase [Acinetobacter baumannii AB900] Length = 309 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 109/291 (37%), Positives = 167/291 (57%), Gaps = 2/291 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL Sbjct: 6 KTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 64 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL + Sbjct: 124 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G Sbjct: 184 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGG 243 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 C+ IAG+A + +Y G V + DG+ +A +G + A+ Sbjct: 244 CQVPIAGYATLQDGKIYIEGRVGSVDGQTLLRAELTDEANNAQQLGENLAR 294 >gi|260551059|ref|ZP_05825263.1| porphobilinogen deaminase [Acinetobacter sp. RUH2624] gi|260405826|gb|EEW99314.1| porphobilinogen deaminase [Acinetobacter sp. RUH2624] Length = 314 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/293 (36%), Positives = 169/293 (57%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL Sbjct: 11 KTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 69 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ +L+ R D+ ++D RG + TRL+KL++ + AI+LA AG+KRL E+ Sbjct: 129 GAKVGTSSLRRKSQILKQRPDLQIVDLRGNVGTRLSKLDDGQYDAIILASAGLKRLGLEE 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ + P+ GQGA+ +E ++ L++ + H +T V ERAF A L+G Sbjct: 189 RIRHCIEPSVSLPAVGQGALGLECRADDQDVLALIQPLLHTETDVCVRAERAFNAYLEGG 248 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ IAG+A + ++ G V + DG+ +A +G + A+ + Sbjct: 249 CQVPIAGYATLQDGKIHIEGRVGSPDGQTLLRAELTDEAHNAQQLGENLARNL 301 >gi|194434066|ref|ZP_03066336.1| porphobilinogen deaminase [Shigella dysenteriae 1012] gi|194417724|gb|EDX33823.1| porphobilinogen deaminase [Shigella dysenteriae 1012] gi|320176046|gb|EFW51115.1| Porphobilinogen deaminase [Shigella dysenteriae CDC 74-1112] Length = 318 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 11 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 69 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 129 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 189 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 248 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 249 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 299 >gi|238789375|ref|ZP_04633161.1| Porphobilinogen deaminase [Yersinia frederiksenii ATCC 33641] gi|238722518|gb|EEQ14172.1| Porphobilinogen deaminase [Yersinia frederiksenii ATCC 33641] Length = 313 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 113/289 (39%), Positives = 159/289 (55%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQDLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S L D Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSPNYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH +T V ERA L Sbjct: 179 LETRIRSAMPAEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRETELRVCAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I +A +G L+ +V A DG R G A +G Sbjct: 239 EGGCQVPIGSYAELEGDILWLRALVGAPDGSEIIRGERRGPAQHAEQMG 287 >gi|15600453|ref|NP_253947.1| porphobilinogen deaminase [Pseudomonas aeruginosa PAO1] gi|107104362|ref|ZP_01368280.1| hypothetical protein PaerPA_01005437 [Pseudomonas aeruginosa PACS2] gi|218894362|ref|YP_002443232.1| porphobilinogen deaminase [Pseudomonas aeruginosa LESB58] gi|254243856|ref|ZP_04937178.1| porphobilinogen deaminase [Pseudomonas aeruginosa 2192] gi|12230932|sp|Q60169|HEM3_PSEAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226740638|sp|B7V5F0|HEM3_PSEA8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|9951571|gb|AAG08645.1|AE004938_7 porphobilinogen deaminase [Pseudomonas aeruginosa PAO1] gi|126197234|gb|EAZ61297.1| porphobilinogen deaminase [Pseudomonas aeruginosa 2192] gi|218774591|emb|CAW30408.1| porphobilinogen deaminase [Pseudomonas aeruginosa LESB58] Length = 313 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/270 (40%), Positives = 158/270 (58%), Gaps = 2/270 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 +G C+ IA +A +G L+ G+V DG Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDG 268 >gi|205354497|ref|YP_002228298.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205274278|emb|CAR39298.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326629631|gb|EGE35974.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 318 Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 158/291 (54%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 11 LRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGGKGLFV 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL DL S Sbjct: 69 KELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGS 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL E I Sbjct: 129 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLEPRI 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L+G C+ Sbjct: 189 RTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGCQ 248 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG + R G+ A +G A+ + Sbjct: 249 VPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEEL 299 >gi|62182409|ref|YP_218826.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|167553883|ref|ZP_02347627.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168244626|ref|ZP_02669558.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263173|ref|ZP_02685146.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467648|ref|ZP_02701485.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194442426|ref|YP_002043172.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197247501|ref|YP_002148864.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|213029666|ref|ZP_03344113.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213416718|ref|ZP_03349862.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213425401|ref|ZP_03358151.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213649584|ref|ZP_03379637.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213865139|ref|ZP_03387258.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|62130042|gb|AAX67745.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|194401089|gb|ACF61311.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|195630016|gb|EDX48676.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197211204|gb|ACH48601.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205321788|gb|EDZ09627.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205336530|gb|EDZ23294.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205348255|gb|EDZ34886.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|322716902|gb|EFZ08473.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 320 Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 158/291 (54%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 13 LRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGGKGLFV 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL DL S Sbjct: 71 KELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGS 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL E I Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L+G C+ Sbjct: 191 RTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGCQ 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG + R G+ A +G A+ + Sbjct: 251 VPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEEL 301 >gi|113460193|ref|YP_718250.1| porphobilinogen deaminase [Haemophilus somnus 129PT] gi|170718229|ref|YP_001785251.1| porphobilinogen deaminase [Haemophilus somnus 2336] gi|123131907|sp|Q0I178|HEM3_HAES1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238058918|sp|B0UWZ8|HEM3_HAES2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|112822236|gb|ABI24325.1| hydroxymethylbilane synthase (porphobilinogen deaminase, PGB) [Haemophilus somnus 129PT] gi|168826358|gb|ACA31729.1| porphobilinogen deaminase [Haemophilus somnus 2336] Length = 321 Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 105/262 (40%), Positives = 156/262 (59%), Gaps = 2/262 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A ++ L + ++ ++P+ TKGD I + L +IGGKGL Sbjct: 5 KTLKIATRQSPLALWQANYVKNRLQ--QRYSHLSVELVPIITKGDVILDTPLAKIGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L++GE D AVHS KD+P + KGL++S PRED RD F+S+ ++L +L Sbjct: 63 FVKELENALLNGEADIAVHSMKDVPMQFPKGLELSVICPREDPRDAFVSNKYRTLDELPQ 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+ L WR+D+ + RG + TRLNKL+ AI+LA AG+ RL + Sbjct: 123 GAIVGTSSLRRQCQLKNWRADLDIRSLRGNVGTRLNKLDQGDYDAIILASAGLIRLGLTE 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ + I+ P+ GQGA+ IE V++ Q L+ + + T V ERA L G Sbjct: 183 RIRSFIEIDTILPACGQGAVGIECRVDDRDVQSLLMPLADQTTTYCVLAERAMNFHLQGG 242 Query: 244 CKSAIAGFAYCKGSTLYFYGIV 265 C+ I +A + + LY G+V Sbjct: 243 CQVPIGAYAILENNQLYLRGLV 264 >gi|254238043|ref|ZP_04931366.1| porphobilinogen deaminase [Pseudomonas aeruginosa C3719] gi|126169974|gb|EAZ55485.1| porphobilinogen deaminase [Pseudomonas aeruginosa C3719] Length = 313 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 108/270 (40%), Positives = 158/270 (58%), Gaps = 2/270 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 +G C+ IA +A +G L+ G+V DG Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDG 268 >gi|325124236|gb|ADY83759.1| porphobilinogen deaminase [Acinetobacter calcoaceticus PHEA-2] Length = 309 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 110/293 (37%), Positives = 168/293 (57%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL Sbjct: 6 KTLKIATRQSPLALWQAEHIRARLEELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ ++ DL Sbjct: 64 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNRFETFADLPQ 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL+ + AI+LA AG+KRL + Sbjct: 124 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDEGQYDAIILASAGLKRLGLSE 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L + P+ GQGA+ +E + L++ + HE+T V ERAF A L+G Sbjct: 184 RIRHCLTPDISLPAVGQGALGLECRAVDQDVLALIQPLLHEETDVCVRAERAFNAYLEGG 243 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ IAG+A + ++ G V + DG+ +A +G + A+ + Sbjct: 244 CQVPIAGYATLQNGQIHIEGRVGSPDGQTLLRAELTDEANNAQQLGENLARNL 296 >gi|16762196|ref|NP_457813.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143685|ref|NP_807027.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415793|ref|YP_152868.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194734788|ref|YP_002116870.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197264899|ref|ZP_03164973.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197301061|ref|ZP_02663450.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197364723|ref|YP_002144360.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243181|ref|YP_002217871.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205358019|ref|ZP_02574964.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205360118|ref|ZP_02834695.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|224585757|ref|YP_002639556.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238912944|ref|ZP_04656781.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289825622|ref|ZP_06544800.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|61225723|sp|P0A1Q8|HEM3_SALTY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|61225724|sp|P0A1Q9|HEM3_SALTI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|81599707|sp|Q5PKL7|HEM3_SALPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226706297|sp|B5FN93|HEM3_SALDC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238059000|sp|B5BIU8|HEM3_SALPK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238059001|sp|B4TNV3|HEM3_SALSV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800257|sp|C0Q3B3|HEM3_SALPC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|25292188|pir||AD0920 porphobilinogen deaminase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504500|emb|CAD09382.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi] gi|29139320|gb|AAO70887.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56130050|gb|AAV79556.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194710290|gb|ACF89511.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197096200|emb|CAR61796.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197243154|gb|EDY25774.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197288774|gb|EDY28149.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197937697|gb|ACH75030.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205328154|gb|EDZ14918.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205340974|gb|EDZ27738.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|224470285|gb|ACN48115.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|312915057|dbj|BAJ39031.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225457|gb|EFX50514.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322613018|gb|EFY09969.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617394|gb|EFY14294.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625614|gb|EFY22436.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627037|gb|EFY23830.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631247|gb|EFY28010.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638280|gb|EFY34979.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642784|gb|EFY39371.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646974|gb|EFY43476.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650361|gb|EFY46774.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656348|gb|EFY52642.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657573|gb|EFY53843.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665984|gb|EFY62165.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666723|gb|EFY62900.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671034|gb|EFY67164.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322679259|gb|EFY75311.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681663|gb|EFY77690.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686010|gb|EFY81998.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192636|gb|EFZ77864.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196502|gb|EFZ81652.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203746|gb|EFZ88767.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205379|gb|EFZ90353.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210748|gb|EFZ95624.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215916|gb|EGA00649.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221409|gb|EGA05827.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227573|gb|EGA11729.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231758|gb|EGA15869.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236173|gb|EGA20250.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239590|gb|EGA23638.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244314|gb|EGA28322.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249589|gb|EGA33501.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250319|gb|EGA34205.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256526|gb|EGA40257.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259776|gb|EGA43409.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265184|gb|EGA48682.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268387|gb|EGA51859.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 313 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 158/291 (54%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL DL S Sbjct: 64 KELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L+G C+ Sbjct: 184 RTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG + R G+ A +G A+ + Sbjct: 244 VPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEEL 294 >gi|261867394|ref|YP_003255316.1| porphobilinogen deaminase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412726|gb|ACX82097.1| porphobilinogen deaminase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 308 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 106/270 (39%), Positives = 159/270 (58%), Gaps = 2/270 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K +I TR SPLAL A + L ++ P N+ ++P+ TKGD I + L +IGG Sbjct: 1 MTQKSLKIATRQSPLALWQANYVKDLLQQLY--PDLNVELVPMVTKGDVILDSPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L++ E D AVHS KD+P + +GL ++ RED RD F+S++ ++L + Sbjct: 59 KGLFVKELENALLNKEADIAVHSMKDVPMQFPEGLGLAVICKREDPRDAFVSNSYRTLAE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+ RL Sbjct: 119 LPQGAVVGTSSLRRQCQLKTLRPDLEIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I +++E P+ GQGA+ IE ++ Q+L+ + +T V ERA L Sbjct: 179 LAERIASFIDVEQSLPAAGQGAVGIECRTDDVAVQQLLAPLADAETTSCVLAERAMNHHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C+ I G+A + S LY +V + DG Sbjct: 239 QGGCQVPIGGYAVLRDSELYLRALVGSVDG 268 >gi|307140503|ref|ZP_07499859.1| porphobilinogen deaminase [Escherichia coli H736] Length = 318 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 11 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 69 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 129 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 189 RAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 248 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 249 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 299 >gi|49085204|gb|AAT51260.1| PA5260 [synthetic construct] Length = 314 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 108/270 (40%), Positives = 158/270 (58%), Gaps = 2/270 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 +G C+ IA +A +G L+ G+V DG Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDG 268 >gi|261345249|ref|ZP_05972893.1| hydroxymethylbilane synthase [Providencia rustigianii DSM 4541] gi|282566947|gb|EFB72482.1| hydroxymethylbilane synthase [Providencia rustigianii DSM 4541] Length = 314 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 105/265 (39%), Positives = 162/265 (61%), Gaps = 2/265 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A+ ++ L +H P + ++P+ TKGD I + L ++GGKGLF Sbjct: 7 VRIATRKSPLALWQAYFVKAKLEQLH--PNLQVELVPMVTKGDIILDTPLAKVGGKGLFV 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P + +GL + RED RD F+S+ ++ +L S Sbjct: 65 KELELALLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYANIDELPAGS 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL+ ++ I Sbjct: 125 IVGTSSLRRQCQLKELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLELDERI 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 K L E P+ GQGA+ IE +++ + ++L+ +NH++T V ERA L+G C+ Sbjct: 185 KTALEPELSLPAVGQGAVGIECRLDDQRTRDLLAKLNHDETSICVLAERAMNMRLEGGCQ 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270 I +A + + ++ +V A DG Sbjct: 245 VPIGSYAIWQDNKIWLRALVGAPDG 269 >gi|193067963|ref|ZP_03048928.1| porphobilinogen deaminase [Escherichia coli E110019] gi|192958583|gb|EDV89021.1| porphobilinogen deaminase [Escherichia coli E110019] Length = 318 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 11 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 69 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 129 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 189 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 248 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 249 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 299 >gi|187733255|ref|YP_001882498.1| porphobilinogen deaminase [Shigella boydii CDC 3083-94] gi|187430247|gb|ACD09521.1| porphobilinogen deaminase [Shigella boydii CDC 3083-94] Length = 320 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMTSH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301 >gi|238765355|ref|ZP_04626280.1| Porphobilinogen deaminase [Yersinia kristensenii ATCC 33638] gi|238696442|gb|EEP89234.1| Porphobilinogen deaminase [Yersinia kristensenii ATCC 33638] Length = 313 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 113/293 (38%), Positives = 163/293 (55%), Gaps = 2/293 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL + R+D RD F+S L D Sbjct: 59 KGLFVKELELAMLDGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSSNYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + HAI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDKGEYHAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH +T V ERA L Sbjct: 179 LETRIRYAMPAEESLPAVGQGAVGIECRLDDDYTRQLLAPLNHRETELRVCAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 +G C+ I +A G+TL+ +V A DG R G +A +G + A Sbjct: 239 EGGCQVPIGSYAELDGNTLWLRALVGAPDGSEIIRGERRGPAENAEQMGVELA 291 >gi|329297028|ref|ZP_08254364.1| porphobilinogen deaminase [Plautia stali symbiont] Length = 313 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 114/289 (39%), Positives = 159/289 (55%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K FRI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG Sbjct: 1 MLNKIFRIATRQSPLALWQAQYVQQRLMAAH--PGLQVELMPMVTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P GL + RED RD F+S+ S+ Sbjct: 59 KGLFVKELELAMLENRADMAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNHYSSIDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + RG + TRL+KL+ + AI+LA AG+KRL Sbjct: 119 LPQGAVVGTSSLRRQCQISARRPDLVIHSLRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L E P+ GQGA+ IE +++ L++ +NH DT V ERA L Sbjct: 179 LEDRIRQALPAEFSLPAVGQGAVGIECRLDDQPLITLLQALNHSDTAVCVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I FA + L+ G+V A DG R G R A +G Sbjct: 239 EGGCQVPIGSFAVLEDDQLWLRGLVGAPDGSQMVVGERRGPREQAEQMG 287 >gi|200388118|ref|ZP_03214730.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199605216|gb|EDZ03761.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 320 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 158/291 (54%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 13 LRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGGKGLFV 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL DL S Sbjct: 71 KELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGS 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL E I Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L+G C+ Sbjct: 191 RTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGCQ 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG + R G+ A +G A+ + Sbjct: 251 VPIGSYAEIINGEIWLRALVGAPDGSVIVRGERRGSPEQAEQMGISLAEEL 301 >gi|187776117|ref|ZP_02800653.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4196] gi|188025006|ref|ZP_02775407.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4113] gi|189010242|ref|ZP_02805709.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4076] gi|189401833|ref|ZP_02778707.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4401] gi|189403100|ref|ZP_02793091.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4486] gi|189404376|ref|ZP_02788935.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4501] gi|189404861|ref|ZP_02811648.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC869] gi|208806069|ref|ZP_03248406.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4206] gi|208812922|ref|ZP_03254251.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4045] gi|208819553|ref|ZP_03259873.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4042] gi|209396873|ref|YP_002273321.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4115] gi|217324566|ref|ZP_03440650.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. TW14588] gi|261225578|ref|ZP_05939859.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. FRIK2000] gi|261255624|ref|ZP_05948157.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. FRIK966] gi|187768841|gb|EDU32685.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4196] gi|188015439|gb|EDU53561.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4113] gi|189001539|gb|EDU70525.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4076] gi|189359021|gb|EDU77440.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4401] gi|189362764|gb|EDU81183.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4486] gi|189365984|gb|EDU84400.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4501] gi|189373238|gb|EDU91654.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC869] gi|208725870|gb|EDZ75471.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4206] gi|208734199|gb|EDZ82886.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4045] gi|208739676|gb|EDZ87358.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4042] gi|209158273|gb|ACI35706.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4115] gi|217320787|gb|EEC29211.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. TW14588] gi|320191103|gb|EFW65753.1| Porphobilinogen deaminase [Escherichia coli O157:H7 str. EC1212] gi|320666093|gb|EFX33107.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. LSU-61] gi|326344260|gb|EGD68020.1| Porphobilinogen deaminase [Escherichia coli O157:H7 str. 1125] gi|326347912|gb|EGD71626.1| Porphobilinogen deaminase [Escherichia coli O157:H7 str. 1044] Length = 318 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 11 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 69 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 129 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 189 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 248 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 249 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 299 >gi|147677307|ref|YP_001211522.1| porphobilinogen deaminase [Pelotomaculum thermopropionicum SI] gi|189028095|sp|A5D3L5|HEM3_PELTS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|146273404|dbj|BAF59153.1| porphobilinogen deaminase [Pelotomaculum thermopropionicum SI] Length = 312 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 112/294 (38%), Positives = 166/294 (56%), Gaps = 2/294 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +GTR S LA+ A L ++ P + I+ + T GDRI + L +IG KG Sbjct: 2 KREIAVGTRVSKLAMWQARWVVDRLKEL--CPGCSFRIVGIRTLGDRILDAALVKIGDKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E ++ GEID AVHS KD+PT+L +GL I A RE DV +S + L +L Sbjct: 60 LFTKELEAAMLRGEIDMAVHSMKDLPTELPEGLVIGAVCKREHPADVLVSRRGKKLDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL +R D+ +++ RG I TRL KL A +LAYAG+ R+ ++ Sbjct: 120 GGALVGTSSLRRCAQLLWYRDDLRMVNLRGNINTRLRKLEEENLDAAVLAYAGLFRMGRQ 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I +++ + P+ GQG+I +E ++ + ELVK I+H ++ +V ERAFL L+G Sbjct: 180 DAITQVIPFDICLPAVGQGSIGVEVRSDDGEVLELVKKIDHRESRLAVFAERAFLRRLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ + + L G+V DGK GN DA IG A+ + Sbjct: 240 GCQVPVGALGTVENDRLRLEGVVATPDGKQLVRSFVEGNGGDAAAIGLRLAEKL 293 >gi|126653692|ref|ZP_01725611.1| porphobilinogen deaminase [Bacillus sp. B14905] gi|126589729|gb|EAZ83864.1| porphobilinogen deaminase [Bacillus sp. B14905] Length = 310 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 117/301 (38%), Positives = 167/301 (55%), Gaps = 8/301 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + L P + + TKGD+I + L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQTNWFINELKAAG--APFEFEVKEIVTKGDQILDVQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ L EID AVHS KDMP L +GL I PRED RD FIS DL +V+ Sbjct: 64 IEQALYDKEIDFAVHSMKDMPAVLPEGLVIGCIPPREDARDAFISKGHVKFADLPAGAVV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A LL R D+ + RG ++TRL KL + AI+LA AG+KRL E V+ Sbjct: 124 GTSSLRRSAQLLTVRPDLEIKWIRGNVDTRLAKLETEEYDAIILAAAGLKRLGWSEDVVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E L++ED P+ QG++ IE ++ + + + + TW + ERAFLA +DG C+ Sbjct: 184 EFLSVEDCLPAVAQGSLGIECRGDDTELLAELAKLTDQLTWQEAHAERAFLAAMDGGCQV 243 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 IAG+A G + G+V A D + ++ + G+ DA IG + A ++ + F+ Sbjct: 244 PIAGYATSNGDEITLTGLVAAPDASVVYKETVVGS--DAQKIGEELAT---ILTKQGAFD 298 Query: 307 F 307 Sbjct: 299 L 299 >gi|238897905|ref|YP_002923584.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259647800|sp|C4K4E3|HEM3_HAMD5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|229465662|gb|ACQ67436.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 309 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 112/293 (38%), Positives = 160/293 (54%), Gaps = 2/293 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M R+ TR SPLAL A ++ L H P ++++P+ T+GD I L++ GG Sbjct: 1 MSNNMIRLATRQSPLALWQAHYVKTGLEFFH--PDLKVILLPMVTQGDNILGTALSKTGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ D AVHS KDMP +GL + A RED RD F+S + Sbjct: 59 KGLFVKELERAVLDNRADIAVHSIKDMPLYFPEGLGLVAVCEREDPRDAFLSLRYHDVAQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L + I V D RG + RL KL+ AI+LA AG+KRL Sbjct: 119 LPEGSVVGTSSLRRQCQLYKNYPGIVVRDLRGNVGARLKKLDQGDYDAIVLAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E + +IL E P+ GQGAI IE +++ + V +NH + ++CERA L L Sbjct: 179 LENRMTQILRPETSLPAAGQGAIGIECRLDDTVTLQRVATLNHRPSQLKISCERALLKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 +G C++ I +A + L+ V A DG++ + R GN A IG + A Sbjct: 239 EGGCQTPIGSYAEIENDELWLRAFVGAPDGQLIIDGERRGNFDSAEKIGFELA 291 >gi|331660148|ref|ZP_08361084.1| hydroxymethylbilane synthase [Escherichia coli TA206] gi|320185465|gb|EFW60234.1| Porphobilinogen deaminase [Shigella flexneri CDC 796-83] gi|331052716|gb|EGI24751.1| hydroxymethylbilane synthase [Escherichia coli TA206] gi|332084681|gb|EGI89869.1| porphobilinogen deaminase [Shigella boydii 5216-82] gi|332084931|gb|EGI90113.1| porphobilinogen deaminase [Shigella dysenteriae 155-74] Length = 313 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294 >gi|82546156|ref|YP_410103.1| porphobilinogen deaminase [Shigella boydii Sb227] gi|300904058|ref|ZP_07121938.1| porphobilinogen deaminase [Escherichia coli MS 84-1] gi|301303699|ref|ZP_07209820.1| porphobilinogen deaminase [Escherichia coli MS 124-1] gi|81247567|gb|ABB68275.1| porphobilinogen deaminase [Shigella boydii Sb227] gi|300403938|gb|EFJ87476.1| porphobilinogen deaminase [Escherichia coli MS 84-1] gi|300840999|gb|EFK68759.1| porphobilinogen deaminase [Escherichia coli MS 124-1] gi|315254168|gb|EFU34136.1| porphobilinogen deaminase [Escherichia coli MS 85-1] gi|315296783|gb|EFU56075.1| porphobilinogen deaminase [Escherichia coli MS 16-3] Length = 320 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301 >gi|332998254|gb|EGK17856.1| porphobilinogen deaminase [Shigella flexneri K-272] gi|333013794|gb|EGK33157.1| porphobilinogen deaminase [Shigella flexneri K-227] Length = 313 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294 >gi|157163278|ref|YP_001460596.1| porphobilinogen deaminase [Escherichia coli HS] gi|170022172|ref|YP_001727126.1| porphobilinogen deaminase [Escherichia coli ATCC 8739] gi|188494806|ref|ZP_03002076.1| porphobilinogen deaminase [Escherichia coli 53638] gi|254039017|ref|ZP_04873068.1| porphobilinogen deaminase [Escherichia sp. 1_1_43] gi|300950432|ref|ZP_07164354.1| porphobilinogen deaminase [Escherichia coli MS 116-1] gi|300955191|ref|ZP_07167588.1| porphobilinogen deaminase [Escherichia coli MS 175-1] gi|301646129|ref|ZP_07246029.1| porphobilinogen deaminase [Escherichia coli MS 146-1] gi|331644538|ref|ZP_08345658.1| hydroxymethylbilane synthase [Escherichia coli H736] gi|157068958|gb|ABV08213.1| porphobilinogen deaminase [Escherichia coli HS] gi|169757100|gb|ACA79799.1| porphobilinogen deaminase [Escherichia coli ATCC 8739] gi|188490005|gb|EDU65108.1| porphobilinogen deaminase [Escherichia coli 53638] gi|226838708|gb|EEH70736.1| porphobilinogen deaminase [Escherichia sp. 1_1_43] gi|260451352|gb|ACX41774.1| porphobilinogen deaminase [Escherichia coli DH1] gi|300317908|gb|EFJ67692.1| porphobilinogen deaminase [Escherichia coli MS 175-1] gi|300450239|gb|EFK13859.1| porphobilinogen deaminase [Escherichia coli MS 116-1] gi|301075655|gb|EFK90461.1| porphobilinogen deaminase [Escherichia coli MS 146-1] gi|315138381|dbj|BAJ45540.1| porphobilinogen deaminase [Escherichia coli DH1] gi|331036210|gb|EGI08445.1| hydroxymethylbilane synthase [Escherichia coli H736] Length = 320 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301 >gi|49176416|ref|YP_026260.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr. MG1655] gi|89110215|ref|AP_003995.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr. W3110] gi|170083288|ref|YP_001732608.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr. DH10B] gi|238902882|ref|YP_002928678.1| hydroxymethylbilane synthase [Escherichia coli BW2952] gi|256026151|ref|ZP_05440016.1| porphobilinogen deaminase [Escherichia sp. 4_1_40B] gi|312971913|ref|ZP_07786087.1| porphobilinogen deaminase [Escherichia coli 1827-70] gi|2506504|sp|P06983|HEM3_ECOLI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|229836108|sp|B1XAH2|HEM3_ECODH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|259647795|sp|C4ZZ69|HEM3_ECOBW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|4388845|pdb|2YPN|A Chain A, Hydroxymethylbilane Synthase gi|28373294|pdb|1GTK|A Chain A, Time-Resolved And Static-Ensemble Structural Chemistry Of Hydroxymethylbilane Synthase gi|41666|emb|CAA31132.1| unnamed protein product [Escherichia coli] gi|48994974|gb|AAT48218.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr. MG1655] gi|85676246|dbj|BAE77496.1| hydroxymethylbilane synthase [Escherichia coli str. K12 substr. W3110] gi|169891123|gb|ACB04830.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr. DH10B] gi|238861470|gb|ACR63468.1| hydroxymethylbilane synthase [Escherichia coli BW2952] gi|309704240|emb|CBJ03588.1| porphobilinogen deaminase [Escherichia coli ETEC H10407] gi|310334290|gb|EFQ00495.1| porphobilinogen deaminase [Escherichia coli 1827-70] gi|315618498|gb|EFU99084.1| porphobilinogen deaminase [Escherichia coli 3431] gi|323934193|gb|EGB30624.1| porphobilinogen deaminase [Escherichia coli E1520] gi|323938941|gb|EGB35160.1| porphobilinogen deaminase [Escherichia coli E482] gi|332345783|gb|AEE59117.1| porphobilinogen deaminase HemC [Escherichia coli UMNK88] Length = 313 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294 >gi|168801133|ref|ZP_02826140.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC508] gi|195938092|ref|ZP_03083474.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4024] gi|218707439|ref|YP_002414958.1| porphobilinogen deaminase [Escherichia coli UMN026] gi|254795801|ref|YP_003080638.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. TW14359] gi|293413246|ref|ZP_06655908.1| porphobilinogen deaminase [Escherichia coli B354] gi|298383172|ref|ZP_06992766.1| hydroxymethylbilane synthase [Escherichia coli FVEC1302] gi|331665450|ref|ZP_08366349.1| hydroxymethylbilane synthase [Escherichia coli TA143] gi|23821693|sp|Q8XAP3|HEM3_ECO57 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226740636|sp|B7NFA7|HEM3_ECOLU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189376679|gb|EDU95095.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC508] gi|218434536|emb|CAR15462.1| hydroxymethylbilane synthase [Escherichia coli UMN026] gi|254595201|gb|ACT74562.1| hydroxymethylbilane synthase [Escherichia coli O157:H7 str. TW14359] gi|284923908|emb|CBG37007.1| porphobilinogen deaminase [Escherichia coli 042] gi|291468194|gb|EFF10691.1| porphobilinogen deaminase [Escherichia coli B354] gi|298276408|gb|EFI17927.1| hydroxymethylbilane synthase [Escherichia coli FVEC1302] gi|320639287|gb|EFX08909.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. G5101] gi|320644672|gb|EFX13722.1| porphobilinogen deaminase [Escherichia coli O157:H- str. 493-89] gi|320649997|gb|EFX18500.1| porphobilinogen deaminase [Escherichia coli O157:H- str. H 2687] gi|320655343|gb|EFX23285.1| porphobilinogen deaminase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|323974386|gb|EGB69514.1| porphobilinogen deaminase [Escherichia coli TW10509] gi|331057348|gb|EGI29337.1| hydroxymethylbilane synthase [Escherichia coli TA143] Length = 313 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294 >gi|15804393|ref|NP_290433.1| porphobilinogen deaminase [Escherichia coli O157:H7 EDL933] gi|15833989|ref|NP_312762.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. Sakai] gi|300900647|ref|ZP_07118805.1| porphobilinogen deaminase [Escherichia coli MS 198-1] gi|301025752|ref|ZP_07189267.1| porphobilinogen deaminase [Escherichia coli MS 69-1] gi|331655487|ref|ZP_08356480.1| hydroxymethylbilane synthase [Escherichia coli M718] gi|331675273|ref|ZP_08376024.1| hydroxymethylbilane synthase [Escherichia coli TA280] gi|12518669|gb|AAG58997.1|AE005611_7 porphobilinogen deaminase = hydroxymethylbilane synthase [Escherichia coli O157:H7 str. EDL933] gi|13364211|dbj|BAB38158.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. Sakai] gi|209753308|gb|ACI74961.1| adenylate cyclase [Escherichia coli] gi|209753310|gb|ACI74962.1| adenylate cyclase [Escherichia coli] gi|209753312|gb|ACI74963.1| adenylate cyclase [Escherichia coli] gi|209753316|gb|ACI74965.1| adenylate cyclase [Escherichia coli] gi|300355863|gb|EFJ71733.1| porphobilinogen deaminase [Escherichia coli MS 198-1] gi|300395875|gb|EFJ79413.1| porphobilinogen deaminase [Escherichia coli MS 69-1] gi|320660969|gb|EFX28412.1| porphobilinogen deaminase [Escherichia coli O55:H7 str. USDA 5905] gi|331046808|gb|EGI18892.1| hydroxymethylbilane synthase [Escherichia coli M718] gi|331067559|gb|EGI38963.1| hydroxymethylbilane synthase [Escherichia coli TA280] Length = 320 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301 >gi|237727921|ref|ZP_04558402.1| porphobilinogen deaminase [Citrobacter sp. 30_2] gi|226910370|gb|EEH96288.1| porphobilinogen deaminase [Citrobacter sp. 30_2] Length = 318 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 11 LRIATRQSPLALWQAHYVKDALMANH--PGLIVELVPMVTRGDVILDTPLAKVGGKGLFV 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + GL + RED RD F+S+ SL +L S Sbjct: 69 KELEVALLEKRADIAVHSMKDVPVEFPDGLGLVTICEREDPRDAFVSNKYNSLDELPAGS 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L + R D+ + RG + TRL+KL+N AI+LA AG+KRL E + Sbjct: 129 IVGTSSLRRQCQLAKRRPDLVIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLGLESRV 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + Q L+ +NHE+T V ERA L+G C+ Sbjct: 189 RTALPPEVSLPAVGQGAVGIECRLDDMRTQALLAPLNHEETALRVKAERAMNTRLEGGCQ 248 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 249 VPIGSYAEIIDGEIWLRALVGAPDGSQMVCGERRGATQDAEQMGISLAEEL 299 >gi|152983553|ref|YP_001351322.1| porphobilinogen deaminase [Pseudomonas aeruginosa PA7] gi|167008817|sp|A6VE37|HEM3_PSEA7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|150958711|gb|ABR80736.1| porphobilinogen deaminase [Pseudomonas aeruginosa PA7] Length = 313 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 108/270 (40%), Positives = 156/270 (57%), Gaps = 2/270 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PDLTVTLLPMTSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++++D P+ GQGA+ IE + L+ ++H DT V ERA L Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADADLHALLAPLHHADTALRVTAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 +G C+ IA +A +G L+ G+V DG Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDG 268 >gi|58617102|ref|YP_196301.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Gardel] gi|58416714|emb|CAI27827.1| Porphobilinogen deaminase [Ehrlichia ruminantium str. Gardel] Length = 299 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 115/296 (38%), Positives = 171/296 (57%), Gaps = 9/296 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +GTR S LA+A A + + L + P N+ I+ + T GD +L+EIGG Sbjct: 1 MNSMNVYLGTRGSILAIAQAMKVKKLLYNYF--PDINVQIVHIVTSGDINDKISLSEIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L++G ID AVHS KD+P L I L R DVFIS QSL+ Sbjct: 59 KGLFLKELEEALLTGTIDLAVHSMKDVPAFYCDSLVIPCILKRSSPYDVFISSKYQSLRS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++VIGTSS+RRK L+R S + V+ RG ++TR+ KL + I+LA AG+ R+ Sbjct: 119 LPDNAVIGTSSIRRKVQLMRLLSSVQVVPIRGNVDTRILKLEAGQYDGIILAKAGLMRIN 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K VIKE+L+ + + GQGAI I+ N+ K +++K++N + ++ SV ER+F+ + Sbjct: 179 KTHVIKEVLDPQVMLSAVGQGAIGIQCRANDYKMIDMIKILNCKKSYISVAAERSFMKTV 238 Query: 241 DGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA----INIGRD 291 +GSC + +A A Y TLY ++ + +F + N CDA IN+G D Sbjct: 239 NGSCDTPLAALAKYVNSDTLYMSCMLSNEEKTVFSDCYF--NECDAEISGINMGND 292 >gi|27117223|emb|CAD48146.1| porphobilinogen deaminase [Bacillus megaterium] Length = 310 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 120/292 (41%), Positives = 169/292 (57%), Gaps = 8/292 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP-PHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +G+R S LAL +T+ + + K P I + TKGD+I N TL+++GGKGLF + Sbjct: 6 VGSRRSKLALT---QTKWVIEQLKKQGLPFEFEIKEMVTKGDQILNVTLSKVGGKGLFVK 62 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE+ ++ EID AVHS KDMP L +GL I RED RD IS + ++L +V Sbjct: 63 EIEQAMLDKEIDMAVHSMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELPSGAV 122 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-VI 185 IGTSSLRR A LL RSDI + RG I+TRL KL N AI+LA AG+ R+ K + Sbjct: 123 IGTSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNEDYDAIILAAAGLSRMGWSKDTV 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE N+ + L++ +NH++T +V ER FL E++G C+ Sbjct: 183 TQYLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEMEGGCQ 242 Query: 246 SAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 IAG+ G + +V + DGK ++ G D I IG +AA+ + Sbjct: 243 VPIAGYGRILDGGNIELTSLVASPDGKTIYKEHITGK--DPIAIGSEAAERL 292 >gi|302381524|ref|YP_003817347.1| porphobilinogen deaminase [Brevundimonas subvibrioides ATCC 15264] gi|302192152|gb|ADK99723.1| porphobilinogen deaminase [Brevundimonas subvibrioides ATCC 15264] Length = 315 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 104/265 (39%), Positives = 154/265 (58%), Gaps = 1/265 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LALA + + ++ ++P +V++ + T GD+I +R L E+GGK LFT Sbjct: 4 IRIGTRRSALALAQSGMMQRAIAAAMQLPIEEVVLVEIVTTGDQIQDRRLMEVGGKALFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G +D AVHS KD+P + GL I+A RED RD FIS L+ L Sbjct: 64 KEIEEALLDGRVDIAVHSMKDVPAEQPPGLTIAAIPEREDARDAFISRDFDELEHLPHGG 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT+SLRR+A L R D+ + RG I+TRL + AILLA +G+ RL + + Sbjct: 124 RLGTASLRRQAQALALRPDLQIEMLRGNIDTRLRRAAEGDFDAILLAASGLNRLGRSDAV 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L+++ F P+PGQGA+ ++T + V+ +NH T V ER + L+GSC+ Sbjct: 184 RGFLSVDAFLPAPGQGALALQTREGDTD-HAWVQAMNHGPTALCVAAERGAMVALEGSCR 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270 +A+ A+ G L +LA DG Sbjct: 243 TAVGAHAHIDGDRLTLTTEMLAPDG 267 >gi|268592915|ref|ZP_06127136.1| hydroxymethylbilane synthase [Providencia rettgeri DSM 1131] gi|291311707|gb|EFE52160.1| hydroxymethylbilane synthase [Providencia rettgeri DSM 1131] Length = 314 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 113/291 (38%), Positives = 165/291 (56%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L +H P + ++P+ TKGD I + L ++GGKGLF Sbjct: 7 VRIATRKSPLALWQAHFVKDKLEQLH--PGLLVELVPMVTKGDIILDTPLAKVGGKGLFV 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P + +GL + RED RD F+S+ +L+ L S Sbjct: 65 KELELALLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYDNLEALPEGS 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 125 IVGTSSLRRQCQLRELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLETRI 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 K L E P+ GQGA+ IE +N+ K +EL+ +N++ T V ERA L+G C+ Sbjct: 185 KTALAPEQCLPAVGQGAVGIECRLNDSKTRELLAKLNNDATSTCVLAERAMNMRLEGGCQ 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A + ++ +V A DG + R + +A G A+ + Sbjct: 245 VPIGSYAIWQDDKIWLRALVGAPDGSVIIRGERRVSPSEANQAGVSLAEEL 295 >gi|110807507|ref|YP_691027.1| porphobilinogen deaminase [Shigella flexneri 5 str. 8401] gi|110617055|gb|ABF05722.1| porphobilinogen deaminase [Shigella flexneri 5 str. 8401] gi|281603194|gb|ADA76178.1| Porphobilinogen deaminase [Shigella flexneri 2002017] Length = 320 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 251 VPIGSYAELIDGEIWLCALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301 >gi|238760184|ref|ZP_04621331.1| Porphobilinogen deaminase [Yersinia aldovae ATCC 35236] gi|238701620|gb|EEP94190.1| Porphobilinogen deaminase [Yersinia aldovae ATCC 35236] Length = 313 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 113/289 (39%), Positives = 158/289 (54%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P GL + R+D RD F+S L D Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIAFPDGLGLVTICERDDPRDAFVSSHFAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + HAI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLVIRDLRGNVGTRLAKLDKGEYHAIILAVAGLNRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH DT V ERA L Sbjct: 179 LETRIRYAMPAEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRDTELRVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I +A G TL+ +V A DG R G +A +G Sbjct: 239 EGGCQVPIGSYAELDGDTLWLRALVGAPDGSEIIRGERRGPVANAEQMG 287 >gi|169829410|ref|YP_001699568.1| porphobilinogen deaminase [Lysinibacillus sphaericus C3-41] gi|238058924|sp|B1HVD6|HEM3_LYSSC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|168993898|gb|ACA41438.1| Porphobilinogen deaminase [Lysinibacillus sphaericus C3-41] Length = 310 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 116/301 (38%), Positives = 168/301 (55%), Gaps = 8/301 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + L P + + TKGD+I + L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQTNWFINELKAAG--APFEFEVKEIVTKGDQILDVQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ L EID AVHS KDMP L +GL I PRED RD FIS +L +V+ Sbjct: 64 IEQALYEKEIDFAVHSMKDMPAVLPEGLVIGCIPPREDARDAFISKGHVKFSELPAGAVV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A LL R D+ + RG ++TRL KL + AI+LA AG+KRL E V+ Sbjct: 124 GTSSLRRSAQLLTVRPDLEIKWIRGNVDTRLAKLETEEYDAIILAAAGLKRLGWSEDVVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E L++ED P+ QG++ IE ++ + + + + + TW + ERAFLA +DG C+ Sbjct: 184 EFLSVEDCLPAVAQGSLGIECREDDTELLDELAKLTDQLTWQEAHAERAFLAAMDGGCQV 243 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 IAG+A G + G+V A D + ++ + G+ DA IG + A ++ + F+ Sbjct: 244 PIAGYATSNGEEITLTGLVAAPDASVVYKETVVGS--DAQKIGEELAT---ILTKQGAFD 298 Query: 307 F 307 Sbjct: 299 L 299 >gi|30064902|ref|NP_839073.1| porphobilinogen deaminase [Shigella flexneri 2a str. 2457T] gi|56480439|ref|NP_709607.2| porphobilinogen deaminase [Shigella flexneri 2a str. 301] gi|61213578|sp|Q83PH4|HEM3_SHIFL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|30043162|gb|AAP18884.1| porphobilinogen deaminase, hydroxymethylbilane synthase [Shigella flexneri 2a str. 2457T] gi|56383990|gb|AAN45314.2| porphobilinogen deaminase, hydroxymethylbilane synthase [Shigella flexneri 2a str. 301] gi|313647157|gb|EFS11612.1| porphobilinogen deaminase [Shigella flexneri 2a str. 2457T] gi|332751946|gb|EGJ82341.1| porphobilinogen deaminase [Shigella flexneri 2747-71] gi|332996995|gb|EGK16613.1| porphobilinogen deaminase [Shigella flexneri VA-6] gi|332997894|gb|EGK17501.1| porphobilinogen deaminase [Shigella flexneri K-218] gi|333019501|gb|EGK38782.1| porphobilinogen deaminase [Shigella flexneri K-304] Length = 313 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 VPIGSYAELIDGEIWLCALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294 >gi|293393888|ref|ZP_06638195.1| hydroxymethylbilane synthase [Serratia odorifera DSM 4582] gi|291423715|gb|EFE96937.1| hydroxymethylbilane synthase [Serratia odorifera DSM 4582] Length = 313 Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 118/305 (38%), Positives = 171/305 (56%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQQRLMASH--PDLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P + GL + R+D RD F+S+ SL Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPAGLGLVTICERDDPRDAFVSNRFASLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L + R D+ V D RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPQGSVVGTSSLRRQCQLRQRRPDLLVRDLRGNVGTRLAKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ ++ E+ P+ GQGA+ IE +++ + L+ +NHE T V ERA L Sbjct: 179 LEQRIRSPMSPEESLPAVGQGAVGIECRLDDAVTRALLAPLNHELTATRVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G TL+ +V A DG + R G A ++G + A+ + Sbjct: 239 EGGCQVPIGSYAELDGDTLWLRALVGAPDGSLMVRGERRGPAAQAEHMGIELAEELLAKG 298 Query: 301 NKNVF 305 +++ Sbjct: 299 ARDIL 303 >gi|293407432|ref|ZP_06651352.1| porphobilinogen deaminase [Escherichia coli FVEC1412] gi|291425543|gb|EFE98581.1| porphobilinogen deaminase [Escherichia coli FVEC1412] Length = 313 Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESHI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294 >gi|82779017|ref|YP_405366.1| porphobilinogen deaminase [Shigella dysenteriae Sd197] gi|81243165|gb|ABB63875.1| porphobilinogen deaminase [Shigella dysenteriae Sd197] Length = 320 Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDARTRELLVALNHHETALRVTAERAMNTRLEGGCQ 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301 >gi|114561627|ref|YP_749140.1| porphobilinogen deaminase [Shewanella frigidimarina NCIMB 400] gi|122300909|sp|Q088L3|HEM3_SHEFN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|114332920|gb|ABI70302.1| porphobilinogen deaminase [Shewanella frigidimarina NCIMB 400] Length = 309 Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 110/306 (35%), Positives = 171/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L +IGG Sbjct: 1 MSENIIRIATRKSPLAMWQAEFVKAELERIH--PGLTVELLPMSTKGDVILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P + +GL + RED RD F+S+ +S+ + Sbjct: 59 KGLFVKELEVAMLENRADIAVHSMKDLPVEFPEGLGLQVICEREDPRDAFVSNNYKSISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + D RG + TRL KL++ AI+LA AG+ RLK Sbjct: 119 LPQGAVVGTSSLRRQCQIRAARPDLVIKDLRGNVGTRLAKLDSGDYDAIILAAAGLIRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++ E+ P+ GQGA+ IE ++ + + L+ + H +T V ERA L Sbjct: 179 LNERIANFISAEESLPANGQGAVGIECRTDDARVKALLAPLEHLETRYRVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA G L G+V DG + +G++ DA+ +G A+ + Sbjct: 239 EGGCQVPIGAFAEINGDNLTLRGLVGNPDGSQIIIGTVSGSKTDAVALGESLAEDLLSRG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKTILD 304 >gi|320178095|gb|EFW53075.1| Porphobilinogen deaminase [Shigella boydii ATCC 9905] Length = 559 Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 111/284 (39%), Positives = 158/284 (55%), Gaps = 2/284 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 I +A ++ +V A DG R G DA +G Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMG 287 >gi|317046390|ref|YP_004114038.1| porphobilinogen deaminase [Pantoea sp. At-9b] gi|316948007|gb|ADU67482.1| porphobilinogen deaminase [Pantoea sp. At-9b] Length = 313 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 114/289 (39%), Positives = 159/289 (55%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K FRI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG Sbjct: 1 MLDKIFRIATRQSPLALWQAQYVQQRLMAAH--PGLQVELVPMVTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ S+ Sbjct: 59 KGLFVKELELAMLENRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNHYDSIDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPQGAVVGTSSLRRQCQLSARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + L++ +N DT V ERA L Sbjct: 179 LEDRIRFALPAEISLPAVGQGAVGIECRLDDAELITLLQALNDGDTAVCVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I FA +G L+ G+V + DG R G R A +G Sbjct: 239 EGGCQVPIGSFAVLEGDQLWLRGLVGSPDGSQMITGERRGPRDQAEQMG 287 >gi|159900065|ref|YP_001546312.1| porphobilinogen deaminase [Herpetosiphon aurantiacus ATCC 23779] gi|159893104|gb|ABX06184.1| porphobilinogen deaminase [Herpetosiphon aurantiacus ATCC 23779] Length = 300 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 163/289 (56%), Gaps = 3/289 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LAL R +L+ H P I + ++TKGD I +R L IG KGLF E Sbjct: 6 IGTRKSQLALVQTHAMRDALLAAH--PQLTIELEHITTKGDAILDRPLAAIGDKGLFVSE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE + +G++D AVHSAKD+P+ L + I+AY R D RDV + + L DL + + Sbjct: 64 IEDAMRNGKVDLAVHSAKDLPSILAPDMTIAAYPERADPRDVLVGAEGRRLADLVPGAKV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSS RR A L R D+++ID RG ++TRL KL+ + AI+LA AG++RL K + + Sbjct: 124 GTSSPRRAAQLRHLRPDLTIIDIRGNVDTRLRKLDEGQYDAIVLAAAGLQRLGLLKRVTQ 183 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + P+ QG + IE + + +L+KV++H ++ + E+AFLA + G C+ A Sbjct: 184 FFEPAEMTPAVSQGILGIEARAGDQRVADLLKVLDHAESRATAEAEKAFLATIGGGCQVA 243 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + FA + L+ G++ A DG++ G+ A +G AQ + Sbjct: 244 VGAFATYQIGQLHLIGMIGALDGRLVRG-ELTGSASTAQALGTSLAQQL 291 >gi|24375795|ref|NP_719838.1| porphobilinogen deaminase [Shewanella oneidensis MR-1] gi|39931562|sp|Q8E9H0|HEM3_SHEON RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|24350743|gb|AAN57282.1|AE015863_11 porphobilinogen deaminase [Shewanella oneidensis MR-1] Length = 310 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 111/306 (36%), Positives = 170/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ + D AVHS KD+P +GL + RED RD F+S+ +S+ + Sbjct: 59 KGLFVKELEVAMLEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNIYKSISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+ RLK Sbjct: 119 LPLGATVGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++ E+ P+ GQGA+ IE N+ + + L+ + H +T V ERA L Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA G + G+V DG E G + +A +G A+ + Sbjct: 239 EGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTEATQLGVALAEELLSKG 298 Query: 301 NKNVFN 306 K++ + Sbjct: 299 AKSILD 304 >gi|209693832|ref|YP_002261760.1| porphobilinogen deaminase [Aliivibrio salmonicida LFI1238] gi|226706282|sp|B6EPK1|HEM3_ALISL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|208007783|emb|CAQ77905.1| porphobilinogen deaminase HemC [Aliivibrio salmonicida LFI1238] Length = 311 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 109/305 (35%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++ P RI TR SPLAL A + +L H P + ++ + TKGD I + L +IGGK Sbjct: 3 QQLPVRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKIGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P + +GL + R D RD F+S+T ++ +L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVEFPEGLGLVTICERGDPRDAFVSNTYNNIDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GT SLRR+ L +R D+ + + RG + TRL KL++ AI+LA AG+ RL Sbjct: 121 PQGATVGTCSLRRQCQLKEYRPDLIIKELRGNVGTRLQKLDDGNYDAIILACAGLIRLGL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E IK + E P+ GQGA+ IET +N+ + + L+ +NH +T V CERA L+ Sbjct: 181 EDRIKSSIEPEQSLPAVGQGAVGIETRLNDDRIRALLAPLNHPETAHRVLCERAMNNRLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I ++ G ++ +V DG I G DA +G A+ + Sbjct: 241 GGCQVPIGSYSLIDGDQIWLRALVGEPDGSIMVRGETTGPVSDAEELGTKLAEQLLNDGA 300 Query: 302 KNVFN 306 K++ + Sbjct: 301 KDILD 305 >gi|117924047|ref|YP_864664.1| hydroxymethylbilane synthase [Magnetococcus sp. MC-1] gi|117607803|gb|ABK43258.1| hydroxymethylbilane synthase [Magnetococcus sp. MC-1] Length = 314 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 114/289 (39%), Positives = 167/289 (57%), Gaps = 4/289 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPL-STKGDRITNRTLTEIGGKGLF 64 RIGTR S LA+ A +S L H P IV + L TKGD+I + L ++GGKGLF Sbjct: 7 VRIGTRGSALAVWQAEWVKSQLQAHH---PGIIVELELIKTKGDKILDVPLAKVGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E+ ++ G +D AVHS KD+P + GL + L RED RD +S QSL +L Sbjct: 64 VKELEEAMLDGRVDLAVHSMKDVPAEFPDGLMLGPILKREDPRDALLSIHYQSLAELPQG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 ++IG+SSLRR++ + R D+ + RG + TR+ KL + AI+LA AG+KRL + Sbjct: 124 ALIGSSSLRRQSQIKAKRPDLRLDWLRGNVGTRIQKLVEGQFDAIILAAAGVKRLGLTEH 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + L E+ P+ GQGA+ IE V++ + L+ + H++T V ERAFLA+L+G C Sbjct: 184 VVQYLEPEEMLPAVGQGAVGIEHRVDDARIATLLAPLYHKETHSCVTAERAFLAKLEGGC 243 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 + IAG+A TL G+V +G + G R DA +G+ A Sbjct: 244 QVPIAGYATLHEDTLTLRGLVAEVEGGRVVQAQCQGPRADAYRMGQQLA 292 >gi|301029020|ref|ZP_07192174.1| porphobilinogen deaminase [Escherichia coli MS 196-1] gi|299878014|gb|EFI86225.1| porphobilinogen deaminase [Escherichia coli MS 196-1] Length = 320 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 160/291 (54%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S SL L S Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSDNYDSLDALPAGS 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301 >gi|238750675|ref|ZP_04612174.1| Porphobilinogen deaminase [Yersinia rohdei ATCC 43380] gi|238711065|gb|EEQ03284.1| Porphobilinogen deaminase [Yersinia rohdei ATCC 43380] Length = 313 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 113/289 (39%), Positives = 160/289 (55%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLNKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S L D Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSSHYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ + E+ P+ GQGA+ IE +++ ++L+ +NH +T V ERA L Sbjct: 179 LKSRIRYAMPAEESLPAVGQGAVGIECRLDDDFTRQLLVPLNHRETELRVCAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I +A +G TL+ +V A DG R G DA +G Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSEIIRGERRGPAEDAEQMG 287 >gi|58585034|ref|YP_198607.1| porphobilinogen deaminase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419350|gb|AAW71365.1| Porphobilinogen deaminase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 292 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 116/288 (40%), Positives = 167/288 (57%), Gaps = 8/288 (2%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 RIGTR S LA+A A E + L+D+ ++ II + T GD+ N L EIGGKGLF + Sbjct: 4 RIGTRGSSLAIAQALEAKQKLLDLF--SSLSVEIIKIKTSGDKYANANLAEIGGKGLFIK 61 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE +LI ID AVHS KD+P K L I L R D FIS+ +SLK L ++ Sbjct: 62 EIETELIKSNIDMAVHSLKDVPAFFSKDLTIPCILERLSPYDTFISNKYKSLKSLPQQAI 121 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 I TSS+RRK LL +R D++++ RG + TR L N I+LA AG+ RLKK+ +I Sbjct: 122 IATSSIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLKKDYLIT 178 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E+L+ + + GQGAICI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC + Sbjct: 179 EVLSPKTMLSAVGQGAICIQCRKNDIKIIDLLEKINNNKSFIRVKSERSFMKTVNGSCFT 238 Query: 247 AIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 +A A Y + L+ Y ++ +D K + R DA +G DA Sbjct: 239 PLAALAKYVSENVLHLYCML--ADKKNIYFTERTSFVEDAEKMGMDAG 284 >gi|113968732|ref|YP_732525.1| porphobilinogen deaminase [Shewanella sp. MR-4] gi|114049125|ref|YP_739675.1| porphobilinogen deaminase [Shewanella sp. MR-7] gi|117918843|ref|YP_868035.1| porphobilinogen deaminase [Shewanella sp. ANA-3] gi|123131000|sp|Q0HQI7|HEM3_SHESR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123325438|sp|Q0HN99|HEM3_SHESM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|158512312|sp|A0KS60|HEM3_SHESA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|113883416|gb|ABI37468.1| porphobilinogen deaminase [Shewanella sp. MR-4] gi|113890567|gb|ABI44618.1| porphobilinogen deaminase [Shewanella sp. MR-7] gi|117611175|gb|ABK46629.1| porphobilinogen deaminase [Shewanella sp. ANA-3] Length = 310 Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 112/306 (36%), Positives = 170/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L VH P + ++P+STKGD I + L ++GG Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERVH--PGIVVELLPMSTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ + D AVHS KD+P +GL + RED RD F+S+ +S+ + Sbjct: 59 KGLFVKELEVAMLEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+ RLK Sbjct: 119 LPLGATVGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++ E+ P+ GQGA+ IE N+ + + L+ + H +T V ERA L Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA G + G+V DG E G + +A +G A+ + Sbjct: 239 EGGCQVPIGAFAEIHGDEMTLRGLVGNPDGSEIIEGVITGPKTEATKLGVALAEELLSKG 298 Query: 301 NKNVFN 306 K++ + Sbjct: 299 AKSILD 304 >gi|206889552|ref|YP_002248559.1| porphobilinogen deaminase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741490|gb|ACI20547.1| porphobilinogen deaminase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 311 Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 114/299 (38%), Positives = 175/299 (58%), Gaps = 3/299 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LA+ A + L ++ P + I + T GD+I + L +IGGKGLF +E Sbjct: 10 IGSRGSKLAMWQANWVKDKLQTLY--PELKVEIEKIKTTGDKILDAPLAKIGGKGLFVKE 67 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ L+S +D AVHS KD+PT++ +GLQISA RED RD FIS L +L +V+ Sbjct: 68 IEEALLSKRVDLAVHSMKDVPTEIPEGLQISAICEREDPRDAFISKDGVLLNELPQEAVL 127 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR L R+D+ + RG ++TR+ KL + + AI+LA AG+KR+ E ++ + Sbjct: 128 GTSSLRRTVQLKALRNDLVIKPLRGNVDTRIRKLKDGEFQAIVLAMAGVKRMGVENLVTQ 187 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + + P+ GQGAI IET V++ EL+K +NHE+T + ERAFL+ + G C+ Sbjct: 188 AFSEDLMIPAIGQGAIGIETRVDDDFVNELIKPLNHEETAICILAERAFLSVMGGGCQVP 247 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A A ++L G++ +GK+ + R G+ A ++G + A + K + Sbjct: 248 LACHARIVNNSLKIVGMIGDPEGKMPVIKGFREGSLSQAQSLGVELANELLHRGGKEIL 306 >gi|225175616|ref|ZP_03729610.1| porphobilinogen deaminase [Dethiobacter alkaliphilus AHT 1] gi|225168945|gb|EEG77745.1| porphobilinogen deaminase [Dethiobacter alkaliphilus AHT 1] Length = 314 Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 114/294 (38%), Positives = 166/294 (56%), Gaps = 5/294 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHK-IPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK +G+R S LAL +T + ++ K P + + + T+GD+I + L++IG K Sbjct: 2 KKTIVVGSRDSELALT---QTHFVIGELQKHFPDVDFTVKHIKTEGDKILDVALSKIGDK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKD 120 GLF +EIE L+S EID AVHS KD+PT + GLQI+ RED RD +I+ ++ L D Sbjct: 59 GLFVKEIENALLSKEIDFAVHSMKDVPTAVPDGLQITTITEREDPRDCYIAKDGKTRLFD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 +VIGTSSLRR A LL RSD ++ RG + TR KL+ H I+LAYAG+ RL Sbjct: 119 TPQGAVIGTSSLRRSAQLLHQRSDFEIVPIRGNLNTRFRKLSEQDMHGIILAYAGVYRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I EI++ E P+ GQGA+ IET ++ +V +NH+ T ++ ERAFL +L Sbjct: 179 WADKITEIIDFEKSLPAVGQGALGIETRSDDDFTINIVSALNHDTTASAILAERAFLRQL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 +G C+ I + + L G+V DG G+ ++ +G+ AQ Sbjct: 239 EGGCQVPIGAYGRLEAEELVLDGVVAGLDGSTVLRDQVRGSADESDALGKKLAQ 292 >gi|110835183|ref|YP_694042.1| porphobilinogen deaminase [Alcanivorax borkumensis SK2] gi|123345297|sp|Q0VM28|HEM3_ALCBS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|110648294|emb|CAL17770.1| porphobilinogen deaminase [Alcanivorax borkumensis SK2] Length = 310 Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 110/296 (37%), Positives = 162/296 (54%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ RI TR SPLA+ A + L +H+ + ++ + T+GD+I + L +IGG Sbjct: 1 MSREILRIATRSSPLAIWQAEYVQQRLESLHE--GLRVELVRIKTQGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P +L G + RED RD F+S+T L Sbjct: 59 KGLFVKELEEAMMDGRADIAVHSMKDVPMELPPGFALPVICEREDPRDAFVSNTFDGLSS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+A + R D+ V RG ++TRL KL+ AI+LA AG+KRL+ Sbjct: 119 LPHGACVGTSSLRRQAQVKANRPDLVVNSLRGNVQTRLGKLDAGNFDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ + E+ P+ GQGA+ IE + EL+ ++ DTWD V ERA L Sbjct: 179 MHDRIRYEMPPEESLPAVGQGAVGIECREGDESTIELLSPLSDVDTWDRVVAERAMNRRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IAGFA + L+ G+V DG R +G D A+ + Sbjct: 239 EGGCQVPIAGFALLEDGQLWLRGLVAEEDGSRVLRAEGTAPRGQGAELGIDIAEQL 294 >gi|194334346|ref|YP_002016206.1| porphobilinogen deaminase [Prosthecochloris aestuarii DSM 271] gi|238058997|sp|B4S922|HEM3_PROA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|194312164|gb|ACF46559.1| porphobilinogen deaminase [Prosthecochloris aestuarii DSM 271] Length = 312 Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 113/278 (40%), Positives = 167/278 (60%), Gaps = 4/278 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ IGTR SPLAL A T++ L P +I + + T GD + + L++IG G Sbjct: 2 KQQLIIGTRSSPLALWQAEFTKAEL--SKNFPELDIQLKLIKTTGDVLLDSPLSKIGDMG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT++IEK L++ EID AVHS KD+PT+ +GL +SA+ RED RDV IS +LK L Sbjct: 60 LFTKDIEKHLLAKEIDLAVHSLKDVPTETPEGLILSAFTEREDTRDVIISKNGDNLKQLK 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ I TSSLRR + LL R D + D RG + TR + + + A++LAYAG+ RL Sbjct: 120 PNAKIATSSLRRTSQLLGIRPDFEMGDIRGNLNTRFKRFDESDFDAMILAYAGVHRLNFG 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EIL + P+ GQGA+ IET +++ + +++VKV+N++++ ERA L L G Sbjct: 180 DRISEILPHDVLLPAVGQGALGIETRIDDEQTRQIVKVMNNQNSEYCTKAERALLRHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSR 278 C+ I +A K TL+ V + DGK I +E+++ Sbjct: 240 GCQIPIGAYATYKNGTLHLSAFVGSVDGKRAIRNEITK 277 >gi|160877198|ref|YP_001556514.1| porphobilinogen deaminase [Shewanella baltica OS195] gi|189028155|sp|A9L5G0|HEM3_SHEB9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|160862720|gb|ABX51254.1| porphobilinogen deaminase [Shewanella baltica OS195] gi|315269402|gb|ADT96255.1| porphobilinogen deaminase [Shewanella baltica OS678] Length = 310 Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 111/306 (36%), Positives = 170/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +S+ + Sbjct: 59 KGLFVKELEVAMLDDLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+ + R D+ + D RG + TRL KL+N + AI+LA AG+ RLK Sbjct: 119 LPLGATVGTSSLRRQCQIRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++ E+ P+ GQGA+ IE +N+ + + L+ + H +T V ERA L Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRINDERVKALLAPLEHLETRYRVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA G + G+V DG E G + DA +G A+ + Sbjct: 239 EGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTDATQLGVALAEELLSKG 298 Query: 301 NKNVFN 306 K++ + Sbjct: 299 AKSILD 304 >gi|39998374|ref|NP_954325.1| porphobilinogen deaminase [Geobacter sulfurreducens PCA] gi|55976461|sp|Q747I1|HEM3_GEOSL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|39985320|gb|AAR36675.1| porphobilinogen deaminase [Geobacter sulfurreducens PCA] gi|298507314|gb|ADI86037.1| hydroxymethylbilane synthase [Geobacter sulfurreducens KN400] Length = 318 Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 110/284 (38%), Positives = 164/284 (57%), Gaps = 3/284 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A +S L + P + ++ + T GD+I + L ++GGKGLF Sbjct: 6 LRIGTRASQLALWQANWVKSELE--KRYPGMEVELVKIKTIGDKILDVPLAQVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD FIS+ + +L + Sbjct: 64 KEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLVCITEREDPRDAFISNGV-TFANLPQGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTS+LRR+A LL+ R D+ ++ RG +ETR+ KL +K A++LA AG+KRL V+ Sbjct: 123 KIGTSALRRQAQLLKVRPDLEMVIIRGNVETRIRKLTEDKLDAVILAAAGLKRLGFTDVV 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L ++ P+ GQGA+ +E +++ +E + NH DT +V ERA L +G C+ Sbjct: 183 TEYLPVDLSLPAIGQGALGLECRLDDQAVRETIDFFNHPDTAHAVRAERALLWRCEGGCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 IA G +L G + + DG + S +G D +G Sbjct: 243 VPIAAHGQVSGDSLTLTGFIASVDGTRSVKESISGPVTDCEKLG 286 >gi|291285218|ref|YP_003502036.1| Porphobilinogen deaminase [Escherichia coli O55:H7 str. CB9615] gi|209753314|gb|ACI74964.1| adenylate cyclase [Escherichia coli] gi|290765091|gb|ADD59052.1| Porphobilinogen deaminase [Escherichia coli O55:H7 str. CB9615] Length = 320 Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 160/291 (54%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + GL + RED RD F+S+ SL L S Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPHGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301 >gi|330813348|ref|YP_004357587.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. IMCC9063] gi|327486443|gb|AEA80848.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. IMCC9063] Length = 321 Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 111/296 (37%), Positives = 175/296 (59%), Gaps = 2/296 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVH-KIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ IG+R S L+LA + + L+ + + P I + + T GD+ L +GGK Sbjct: 4 KQKLIIGSRGSRLSLAQSEHFKDELLLANPDLRPDQIELKVIKTSGDKFKTENLASMGGK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +EIE++L+ IDCAVHS KD+PT + L+++A+L R+D RD FIS A+S + L Sbjct: 64 GLFVKEIEQELLENNIDCAVHSLKDVPTFGVPSLKLAAFLKRKDERDAFISPVAKSFETL 123 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 S +GTSS+RR A L + RSD++++ RG I+TR+ K+ +I+LAYAG+KRL Sbjct: 124 KPGSTVGTSSVRRIAQLKKLRSDLNIVSMRGNIDTRIEKVKEGIYDSIVLAYAGLKRLGF 183 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + EIL+ E P+ GQG + I+ N+ + +L+K +N ++T V+ ER+FL ++ Sbjct: 184 HTHVSEILDKEKMLPAAGQGVVTIQCRSNDGELIKLLKSVNDKETEIIVSAERSFLHRVN 243 Query: 242 GSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 G+C + +A A ++ +L+ DGK R G A++IG D A+ I Sbjct: 244 GACDTPVAVNAVLNDDGEVFIQAEILSLDGKKVFNAHRTGISEKAVSIGLDVAEEI 299 >gi|157834325|pdb|1YPN|A Chain A, Reduced Form Hydroxymethylbilane Synthase (K59q Mutant) Crystal Structure After 2 Hours In A Flow Cell Determined By Time-Resolved Laue Diffraction Length = 313 Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 110/284 (38%), Positives = 158/284 (55%), Gaps = 2/284 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG+GLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGQGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 I +A ++ +V A DG R G DA +G Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMG 287 >gi|220933221|ref|YP_002512120.1| Hydroxymethylbilane synthase [Thioalkalivibrio sp. HL-EbGR7] gi|254800261|sp|B8GSU8|HEM3_THISH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|219994531|gb|ACL71133.1| Hydroxymethylbilane synthase [Thioalkalivibrio sp. HL-EbGR7] Length = 316 Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 115/292 (39%), Positives = 164/292 (56%), Gaps = 3/292 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLA+ A + + H P + ++ ++T+GDRI + L ++GGKGLF Sbjct: 6 LRIATRKSPLAVWQAEHVAALVKARH--PGVRVELVGMTTQGDRILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P +L +GL + L RED RD F+S+T +SL +L + Sbjct: 64 KELETGLLEGRADIAVHSMKDVPMELPEGLCLPVILDREDPRDAFVSNTFKSLDELPRDA 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+ L ++D RG + TRL KL+ + AI+LA AG+KRL E I Sbjct: 124 RVGTSSLRRQCQLRHDHPHFQILDLRGNVNTRLAKLDAGEFDAIILAAAGLKRLGFEVRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + E P+ GQGAI IE N+P+ L+ ++ DT V ERA A L+G C+ Sbjct: 184 ASEITPEQSLPAIGQGAIGIECRENDPEVMALIGSLDDPDTHVRVAAERAMNARLNGGCQ 243 Query: 246 SAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 IAG+A TL G+V DG + +G R +A +GR A + Sbjct: 244 VPIAGYAELTDADTLRLRGLVGEPDGSLILRAELSGPRAEAEALGRAVADLL 295 >gi|320197614|gb|EFW72226.1| Porphobilinogen deaminase [Escherichia coli WV_060327] Length = 318 Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 11 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L L S Sbjct: 69 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDALPAGS 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 129 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 189 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQ 248 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 249 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 299 >gi|253775572|ref|YP_003038403.1| porphobilinogen deaminase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|300930031|ref|ZP_07145463.1| porphobilinogen deaminase [Escherichia coli MS 187-1] gi|253326616|gb|ACT31218.1| porphobilinogen deaminase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|300462064|gb|EFK25557.1| porphobilinogen deaminase [Escherichia coli MS 187-1] Length = 320 Score = 195 bits (495), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L L S Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDALPAGS 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 301 >gi|254163746|ref|YP_003046854.1| porphobilinogen deaminase [Escherichia coli B str. REL606] gi|242379335|emb|CAQ34146.1| hydroxymethylbilane synthase [Escherichia coli BL21(DE3)] gi|253975647|gb|ACT41318.1| porphobilinogen deaminase [Escherichia coli B str. REL606] gi|253979803|gb|ACT45473.1| porphobilinogen deaminase [Escherichia coli BL21(DE3)] gi|323959059|gb|EGB54728.1| porphobilinogen deaminase [Escherichia coli H489] gi|323969355|gb|EGB64654.1| porphobilinogen deaminase [Escherichia coli TA007] Length = 313 Score = 195 bits (495), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L L S Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDALPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294 >gi|104784255|ref|YP_610753.1| porphobilinogen deaminase [Pseudomonas entomophila L48] gi|123380753|sp|Q1I316|HEM3_PSEE4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|95113242|emb|CAK17970.1| porphobilinogen deaminase [Pseudomonas entomophila L48] Length = 313 Score = 195 bits (495), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 112/294 (38%), Positives = 163/294 (55%), Gaps = 2/294 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAH--PGLQVSLVPMVSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T +SL+ Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFKSLEA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLVRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADSEIHALLAPLHHIDTADRVVAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 +G C+ IA +A +G L+ G+V G R A +G A+ Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRASAEALGVQVAE 292 >gi|218701284|ref|YP_002408913.1| porphobilinogen deaminase [Escherichia coli IAI39] gi|226740634|sp|B7NTE0|HEM3_ECO7I RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|218371270|emb|CAR19104.1| hydroxymethylbilane synthase [Escherichia coli IAI39] Length = 313 Score = 195 bits (495), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L L S Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDALPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 294 >gi|120553424|ref|YP_957775.1| porphobilinogen deaminase [Marinobacter aquaeolei VT8] gi|166217776|sp|A1TXW9|HEM3_MARAV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|120323273|gb|ABM17588.1| hydroxymethylbilane synthase [Marinobacter aquaeolei VT8] Length = 313 Score = 195 bits (495), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 114/306 (37%), Positives = 172/306 (56%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K+ RI TR S LAL A ++ L +H ++ +I + T+GD+I + L +IGG Sbjct: 1 MSKRTLRIATRSSALALWQAEFIKAELERLHD--NVDVELIKIKTQGDKILDVPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P + +GL + A RED D F+S+ + + Sbjct: 59 KGLFVKELEEAMLDGRADLAVHSMKDVPMEFPEGLGLVAICEREDPTDAFVSNQYEHIDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT+SLRR+A L R D+ + RG + TRL KL+ + AI+LA +G+KRL Sbjct: 119 LPEGAVVGTASLRREAQLRANRPDLQIKVLRGNVNTRLAKLDAGEYDAIVLASSGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ L P+ GQGA+ IE V + + EL+ +NH DTWD V+ ERA L Sbjct: 179 FHDRIRYCLPDTFSLPAVGQGALGIECRVGDTELLELIDPLNHTDTWDRVSAERALNRRL 238 Query: 241 DGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ IA +A + +TL+ G+V A DG V R + +GR+ A+ + + Sbjct: 239 EGGCQVPIAAYALLEDDNTLWLRGLVGAVDGTQIFRVEGRAPRAEGERLGRELAEQLLSM 298 Query: 300 SNKNVF 305 V Sbjct: 299 GADKVL 304 >gi|15617181|ref|NP_240394.1| porphobilinogen deaminase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681931|ref|YP_002468317.1| porphobilinogen deaminase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682486|ref|YP_002468870.1| porphobilinogen deaminase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471641|ref|ZP_05635640.1| porphobilinogen deaminase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11386824|sp|P57651|HEM3_BUCAI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800236|sp|B8D8F3|HEM3_BUCA5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800237|sp|B8D8B0|HEM3_BUCAT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|25292183|pir||H84998 hydroxymethylbilane synthase (EC 4.3.1.8) [imported] - Buchnera sp. (strain APS) gi|10039246|dbj|BAB13280.1| porphobilinogen deaminase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219622219|gb|ACL30375.1| porphobilinogen deaminase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624774|gb|ACL30929.1| porphobilinogen deaminase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086313|gb|ADP66395.1| porphobilinogen deaminase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086887|gb|ADP66968.1| porphobilinogen deaminase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087477|gb|ADP67557.1| porphobilinogen deaminase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087959|gb|ADP68038.1| porphobilinogen deaminase [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 314 Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 110/306 (35%), Positives = 175/306 (57%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL + ++ ++ P NI ++P+ T GD I N++L++IGG Sbjct: 1 MYNKTLRIATRKSPLALKQTKYVQKKILSLY--PDLNIKLVPIVTHGDNILNKSLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ + D A+HS KD+P K+ K L + + R + D +S+ QS+ Sbjct: 59 KGLFIKELELALLENKADIAIHSMKDLPVKITKELCLVSICKRGNALDSLVSNNYQSINQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L+ +R D+ + RG IETR+ KL+ K AI+LA G+ RL+ Sbjct: 119 LPKGAIVGTSSLRRQCQLITYRPDLIISPLRGNIETRIAKLDQGKYDAIILATEGLNRLR 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I +I+ E PS GQGAI I++ +++ K + +NH +T+ +N ERAF +L Sbjct: 179 LKNRITQIIPAELSLPSCGQGAIGIQSRLHDKKVLFFLSRLNHINTFIEINAERAFCRKL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 + C+ I +A K + ++ G+V + +GKI + R G +G A + Sbjct: 239 ESGCQIPIGSYAILKKNKIWLRGLVGSPNGKIILKGERIGCYNTGEKMGYSLADELLKNG 298 Query: 301 NKNVFN 306 KN+ N Sbjct: 299 AKNILN 304 >gi|253699058|ref|YP_003020247.1| porphobilinogen deaminase [Geobacter sp. M21] gi|259647798|sp|C6DYY8|HEM3_GEOSM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|251773908|gb|ACT16489.1| porphobilinogen deaminase [Geobacter sp. M21] Length = 318 Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 108/272 (39%), Positives = 157/272 (57%), Gaps = 3/272 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A +S L + P + + + T GD+I + L ++GG Sbjct: 1 MALKELRIGTRASQLALWQANWVKSELE--KRYPDMTVTLTKIKTIGDKILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD IS+ + D Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISNNVK-FAD 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A LL+ R D+ ++ RG ++TR++KL A++LA AG+ RL Sbjct: 118 LPQGARIGTSALRRQAQLLKVRPDLEMVIIRGNVQTRMDKLKTEGLDAVILAAAGLNRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E+L + P+ GQGA+ IE +++N ++ + NH DT +V ERA L Sbjct: 178 FADQITELLPTDLSLPAIGQGALGIECNLSNQDVKDAISFFNHPDTSRAVRAERALLWRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272 +G C+ IA F G L G + + DGK+ Sbjct: 238 EGGCQVPIAAFGEVTGDELKLTGFIASVDGKV 269 >gi|194438640|ref|ZP_03070728.1| porphobilinogen deaminase [Escherichia coli 101-1] gi|194422444|gb|EDX38443.1| porphobilinogen deaminase [Escherichia coli 101-1] Length = 318 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 11 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L L S Sbjct: 69 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDALPAGS 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 129 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 189 RAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 248 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 249 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEEL 299 >gi|121997816|ref|YP_001002603.1| porphobilinogen deaminase [Halorhodospira halophila SL1] gi|229836112|sp|A1WVT9|HEM3_HALHL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|121589221|gb|ABM61801.1| hydroxymethylbilane synthase [Halorhodospira halophila SL1] Length = 310 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 109/290 (37%), Positives = 164/290 (56%), Gaps = 2/290 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LA+ A + L +H P + ++P+ST+GD I ++ L IGG Sbjct: 1 MAAESLRIATRRSQLAMWQAEHIAAELQRLH--PGLEVELVPMSTRGDEILDQPLARIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ GE D AVHS KD+P +L +G ++A R D RD F+S+ L + Sbjct: 59 KGLFMKELEDGMLRGEADLAVHSMKDIPWRLPEGFDLAAVSDRADPRDAFVSNHYSDLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRR+ ++ R D+ + RG ++TRL KL++ AI+LA +G+ RL+ Sbjct: 119 LPHGARVGTASLRRQCQIMDRRPDLQIEVLRGNVQTRLRKLDDGVYDAIILAASGLDRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I L E P+ GQGA+ IE + + +LV+ +NHE T +N ER A L Sbjct: 179 LTHRIAGRLTPEQSLPAVGQGALGIECREGDERVMKLVEGLNHEATRIRINAERGMNARL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 +GSC+ I G+A G ++ G+V A DG G +A N+GR Sbjct: 239 EGSCQVPIGGYAELDGDEVHLRGLVGAIDGSEVIRGEIRGPAAEAENLGR 288 >gi|184156604|ref|YP_001844943.1| porphobilinogen deaminase [Acinetobacter baumannii ACICU] gi|332874912|ref|ZP_08442763.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6014059] gi|183208198|gb|ACC55596.1| Porphobilinogen deaminase [Acinetobacter baumannii ACICU] gi|322506491|gb|ADX01945.1| hemC [Acinetobacter baumannii 1656-2] gi|323516370|gb|ADX90751.1| porphobilinogen deaminase [Acinetobacter baumannii TCDC-AB0715] gi|332736855|gb|EGJ67831.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6014059] Length = 309 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 108/293 (36%), Positives = 168/293 (57%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL Sbjct: 6 KTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 64 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL + Sbjct: 124 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G Sbjct: 184 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLTLIQPLLHPETDVCVRAERAFNAYLEGG 243 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ IAG+A + ++ G V + DG+ +A +G + A+ + Sbjct: 244 CQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNL 296 >gi|193076128|gb|ABO10737.2| porphobilinogen deaminase [Acinetobacter baumannii ATCC 17978] Length = 309 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 108/293 (36%), Positives = 168/293 (57%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL Sbjct: 6 KTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 64 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL + Sbjct: 124 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G Sbjct: 184 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGG 243 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ IAG+A + ++ G V + DG+ +A +G + A+ + Sbjct: 244 CQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNL 296 >gi|260556364|ref|ZP_05828583.1| porphobilinogen deaminase [Acinetobacter baumannii ATCC 19606] gi|260410419|gb|EEX03718.1| porphobilinogen deaminase [Acinetobacter baumannii ATCC 19606] Length = 314 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 108/293 (36%), Positives = 168/293 (57%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL Sbjct: 11 KTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 69 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL + Sbjct: 129 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G Sbjct: 189 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGG 248 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ IAG+A + ++ G V + DG+ +A +G + A+ + Sbjct: 249 CQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNL 301 >gi|293610070|ref|ZP_06692371.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827302|gb|EFF85666.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 314 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 109/293 (37%), Positives = 166/293 (56%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL Sbjct: 11 KTLKIATRQSPLALWQAEHIRARLEELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 69 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL+ + AI+LA AG+KRL + Sbjct: 129 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDEGQYDAIILASAGLKRLGLSE 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L + P+ GQGA+ +E + L++ + H +T V ERAF A L+G Sbjct: 189 RIRHCLTPDISLPAVGQGALGLECRAADQDVLALIQPLLHAETDVCVRAERAFNAYLEGG 248 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ IAG+A + ++ G V + DG+ +A +G + A+ + Sbjct: 249 CQVPIAGYATLQNGQIHIEGRVGSPDGQTLLRAELTDEANNAQQLGENLARNL 301 >gi|193065671|ref|ZP_03046736.1| porphobilinogen deaminase [Escherichia coli E22] gi|194429243|ref|ZP_03061771.1| porphobilinogen deaminase [Escherichia coli B171] gi|192926638|gb|EDV81267.1| porphobilinogen deaminase [Escherichia coli E22] gi|194412755|gb|EDX29049.1| porphobilinogen deaminase [Escherichia coli B171] gi|320198489|gb|EFW73090.1| Porphobilinogen deaminase [Escherichia coli EC4100B] Length = 318 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 11 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 69 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 129 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 189 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 248 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G +A +G A+ + Sbjct: 249 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEEL 299 >gi|323167552|gb|EFZ53258.1| porphobilinogen deaminase [Shigella sonnei 53G] Length = 313 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G +A +G A+ + Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAKQMGISLAEEL 294 >gi|237756363|ref|ZP_04584911.1| porphobilinogen deaminase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691477|gb|EEP60537.1| porphobilinogen deaminase [Sulfurihydrogenibium yellowstonense SS-5] Length = 310 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 106/294 (36%), Positives = 174/294 (59%), Gaps = 8/294 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A L ++H + + ++ ++T+GD+I + L +IGGKGLF Sbjct: 3 IRIGTRKSQLALWQANYIADRLREIHGV---EVELVKITTQGDKILDVPLAKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L+ EID AVHS KD+PT L +GL++ A RED RD F+S + + L ++ Sbjct: 60 KEIEDALLKNEIDIAVHSLKDVPTVLPEGLELIAITEREDPRDAFLSIKHEHIYQLPENA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSSLRRK+ +++ R D+ + D RG ++TR+ KL + AI+LAYAG+KRL + + Sbjct: 120 VIGTSSLRRKSQIMKIRKDLQIKDLRGNVDTRIRKLEEGQYDAIILAYAGLKRLGLDGKV 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 K I + ++ P+ QG + IE ++ + + L+K +NH +++ ER+FL L+G C+ Sbjct: 180 KYIFSPDEMIPAVCQGFLAIEGRSDDERIKNLIKPLNHYESYLRATAERSFLKTLEGGCQ 239 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFH-----EVSRNGNRCDAINIGRDAAQ 294 + + K ++ G + +G+ ++ E + + AI +G+ A+ Sbjct: 240 VPLGAYCEIKENSFIITGFIADLEGREYYQEKITEQIKENTQEQAIILGKTLAE 293 >gi|209921277|ref|YP_002295361.1| porphobilinogen deaminase [Escherichia coli SE11] gi|218556364|ref|YP_002389278.1| porphobilinogen deaminase [Escherichia coli IAI1] gi|218697519|ref|YP_002405186.1| porphobilinogen deaminase [Escherichia coli 55989] gi|256021454|ref|ZP_05435319.1| porphobilinogen deaminase [Shigella sp. D9] gi|260846422|ref|YP_003224200.1| hydroxymethylbilane synthase HemC [Escherichia coli O103:H2 str. 12009] gi|260857792|ref|YP_003231683.1| hydroxymethylbilane synthase HemC [Escherichia coli O26:H11 str. 11368] gi|260870527|ref|YP_003236929.1| hydroxymethylbilane synthase HemC [Escherichia coli O111:H- str. 11128] gi|293417268|ref|ZP_06659893.1| porphobilinogen deaminase [Escherichia coli B185] gi|293468119|ref|ZP_06664531.1| porphobilinogen deaminase [Escherichia coli B088] gi|331670648|ref|ZP_08371485.1| hydroxymethylbilane synthase [Escherichia coli TA271] gi|226706285|sp|B6I4E0|HEM3_ECOSE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226740635|sp|B7M603|HEM3_ECO8A RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800249|sp|B7L959|HEM3_ECO55 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|209914536|dbj|BAG79610.1| porphobilinogen deaminase [Escherichia coli SE11] gi|218354251|emb|CAV00923.1| hydroxymethylbilane synthase [Escherichia coli 55989] gi|218363133|emb|CAR00774.1| hydroxymethylbilane synthase [Escherichia coli IAI1] gi|257756441|dbj|BAI27943.1| hydroxymethylbilane synthase HemC [Escherichia coli O26:H11 str. 11368] gi|257761569|dbj|BAI33066.1| hydroxymethylbilane synthase HemC [Escherichia coli O103:H2 str. 12009] gi|257766883|dbj|BAI38378.1| hydroxymethylbilane synthase HemC [Escherichia coli O111:H- str. 11128] gi|291321497|gb|EFE60935.1| porphobilinogen deaminase [Escherichia coli B088] gi|291431036|gb|EFF04031.1| porphobilinogen deaminase [Escherichia coli B185] gi|323155206|gb|EFZ41390.1| porphobilinogen deaminase [Escherichia coli EPECa14] gi|323182576|gb|EFZ67980.1| porphobilinogen deaminase [Escherichia coli 1357] gi|323380839|gb|ADX53107.1| porphobilinogen deaminase [Escherichia coli KO11] gi|323943796|gb|EGB39891.1| porphobilinogen deaminase [Escherichia coli H120] gi|324115735|gb|EGC09670.1| porphobilinogen deaminase [Escherichia coli E1167] gi|331062121|gb|EGI34043.1| hydroxymethylbilane synthase [Escherichia coli TA271] Length = 313 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G +A +G A+ + Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEEL 294 >gi|74314316|ref|YP_312735.1| porphobilinogen deaminase [Shigella sonnei Ss046] gi|73857793|gb|AAZ90500.1| porphobilinogen deaminase [Shigella sonnei Ss046] Length = 320 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G +A +G A+ + Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAKQMGISLAEEL 301 >gi|157156845|ref|YP_001465286.1| porphobilinogen deaminase [Escherichia coli E24377A] gi|300818726|ref|ZP_07098933.1| porphobilinogen deaminase [Escherichia coli MS 107-1] gi|300823336|ref|ZP_07103467.1| porphobilinogen deaminase [Escherichia coli MS 119-7] gi|300921486|ref|ZP_07137834.1| porphobilinogen deaminase [Escherichia coli MS 115-1] gi|300923304|ref|ZP_07139352.1| porphobilinogen deaminase [Escherichia coli MS 182-1] gi|301328438|ref|ZP_07221519.1| porphobilinogen deaminase [Escherichia coli MS 78-1] gi|307313621|ref|ZP_07593241.1| porphobilinogen deaminase [Escherichia coli W] gi|331679912|ref|ZP_08380575.1| hydroxymethylbilane synthase [Escherichia coli H591] gi|332282690|ref|ZP_08395103.1| porphobilinogen deaminase [Shigella sp. D9] gi|157078875|gb|ABV18583.1| porphobilinogen deaminase [Escherichia coli E24377A] gi|300411603|gb|EFJ94913.1| porphobilinogen deaminase [Escherichia coli MS 115-1] gi|300420390|gb|EFK03701.1| porphobilinogen deaminase [Escherichia coli MS 182-1] gi|300524122|gb|EFK45191.1| porphobilinogen deaminase [Escherichia coli MS 119-7] gi|300528692|gb|EFK49754.1| porphobilinogen deaminase [Escherichia coli MS 107-1] gi|300845148|gb|EFK72908.1| porphobilinogen deaminase [Escherichia coli MS 78-1] gi|306906602|gb|EFN37114.1| porphobilinogen deaminase [Escherichia coli W] gi|315063097|gb|ADT77424.1| hydroxymethylbilane synthase [Escherichia coli W] gi|324016226|gb|EGB85445.1| porphobilinogen deaminase [Escherichia coli MS 117-3] gi|331072459|gb|EGI43791.1| hydroxymethylbilane synthase [Escherichia coli H591] gi|332105042|gb|EGJ08388.1| porphobilinogen deaminase [Shigella sp. D9] Length = 320 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G +A +G A+ + Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEEL 301 >gi|238918086|ref|YP_002931600.1| porphobilinogen deaminase, [Edwardsiella ictaluri 93-146] gi|238867654|gb|ACR67365.1| porphobilinogen deaminase, putative [Edwardsiella ictaluri 93-146] Length = 317 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 112/284 (39%), Positives = 154/284 (54%), Gaps = 2/284 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A R L+ + P I ++P+ T+GD + + L ++GGKGLF Sbjct: 12 LRIATRQSPLALWQAHYVRDQLL--AQWPQLTIELVPMVTRGDVLLDTPLAKVGGKGLFV 69 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P GL + RED RD F+S SL+ L S Sbjct: 70 KELELALLEGRADIAVHSMKDVPVAFPDGLGLVTICQREDPRDAFVSPRFASLEQLPPGS 129 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ L R D+ + D RG + TRL KL+ AI+LA AG+KRL+ E I Sbjct: 130 VVGTSSLRRQCQLRAARPDLQIRDLRGNVGTRLAKLDAGDYDAIILAAAGLKRLQLEDRI 189 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE + + + L+ +NH +T V ERA L+G C+ Sbjct: 190 RTPLTPEQSLPAVGQGAVGIECRLADDATRRLLAPLNHAETALRVCAERAMNTRLEGGCQ 249 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 I +A G L+ +V A DG + R G A +G Sbjct: 250 VPIGSYAEIDGDRLWLRALVGAPDGSLMICGERRGPLAQAEAMG 293 >gi|204930376|ref|ZP_03221353.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204320780|gb|EDZ05982.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 320 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 110/291 (37%), Positives = 157/291 (53%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 13 LRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGGKGLFV 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL DL S Sbjct: 71 KELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGS 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L D+ + RG + TRL KL+N AI+LA AG+KRL E I Sbjct: 131 IVGTSSLRRQCQLAERHPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L+G C+ Sbjct: 191 RTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGCQ 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG + R G+ A +G A+ + Sbjct: 251 VPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEEL 301 >gi|253991598|ref|YP_003042954.1| porphobilinogen deaminase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253783048|emb|CAQ86213.1| porphobilinogen deaminase [Photorhabdus asymbiotica] Length = 313 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 107/289 (37%), Positives = 159/289 (55%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A + L + P + ++P+ T+GD I + L ++GG Sbjct: 1 MSTKTIRIATRQSPLAMWQALYVQQKLQQFY--PDLEVQLVPMVTQGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S SL + Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPISFPEGLGLVTICERDDPRDAFVSAKYHSLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+++ D RG + TRL+KL+N AI+LA AG+KRL+ Sbjct: 119 LPTGSIVGTSSLRRQCQLRELRPDLTIRDLRGNVGTRLSKLDNGHYDAIILAVAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ L+ + P+ GQGA+ IE +++ + + L+ +NH DT V ER L Sbjct: 179 LHDRIRTPLSAKQLLPAVGQGAVGIECRLDDQQTRALLAPLNHYDTEICVLAERTMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I +A + ++ +V A DG + R DA G Sbjct: 239 EGGCQVPIGSYAIWQDGKIWLRALVGAPDGSVIIRGERTVLPKDACQAG 287 >gi|331005642|ref|ZP_08329011.1| Porphobilinogen deaminase [gamma proteobacterium IMCC1989] gi|330420567|gb|EGG94864.1| Porphobilinogen deaminase [gamma proteobacterium IMCC1989] Length = 324 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 114/296 (38%), Positives = 165/296 (55%), Gaps = 4/296 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR SPLAL A ++ L +H P + ++P++++GD I + L ++GGKG Sbjct: 13 KNTITIATRKSPLALWQAEYVKARLEALH--PEVTVELLPMTSRGDHILDVPLAKVGGKG 70 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L++GE D AVHS KD+P + +GL +S RED RD F+S S DL Sbjct: 71 LFVKELEHALLNGEADIAVHSMKDVPMEFPEGLGLSVICEREDPRDAFVSEKYASFADLP 130 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+ LL R D+ + RG + TRL KL+ + AI+LA AG+ RLK Sbjct: 131 QGAVVGTSSLRRQCQLLEQRPDLQITFLRGNVNTRLRKLDEGEYDAIILAAAGLMRLKMA 190 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E L E P+ GQGA+ IE ++ + + + +N T + V ERA L+G Sbjct: 191 DRITEYLTPELCLPAGGQGAVGIECRDDDEQVKTWLAPLNDPITHECVAAERAMNRRLEG 250 Query: 243 SCKSAIAGFAY--CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ IA +A G L+ G+V + DGKI E G A ++G A+ + Sbjct: 251 GCQVPIASYAIHSADGKQLWLRGLVGSPDGKIMLEDEVTGAPDQADDLGVKLAERL 306 >gi|170724850|ref|YP_001758876.1| porphobilinogen deaminase [Shewanella woodyi ATCC 51908] gi|238059003|sp|B1KQC6|HEM3_SHEWM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|169810197|gb|ACA84781.1| porphobilinogen deaminase [Shewanella woodyi ATCC 51908] Length = 309 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 111/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLAL A ++ L H P + ++P+STKGD I + L ++GG Sbjct: 1 MSQNVIRIATRKSPLALWQAEFVKAELEKFH--PDLTVELLPMSTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +S+ + Sbjct: 59 KGLFVKELEVAMLENRADIAVHSMKDVPVDFPEGLGLEIICEREDPRDAFVSNNYKSISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK Sbjct: 119 LPKGAVVGTSSLRRQCQIRAARPDLQIRDLRGNVGTRLGKLDAGTYDAIILAAAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I ++ E+ P+ GQGA+ IE ++ + + L+ + H +T V ERA L Sbjct: 179 LEERITSFISAEESLPANGQGAVGIECRTDDERVKALLAPLEHAETRFRVIAERAMNTHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A TL G+V DG ++ G + DA +G A+ + Sbjct: 239 EGGCQVPIGAYAEIVDDTLTLRGLVGNPDGTQIIASTKVGPKTDAKALGISLAEELLSKG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKTILD 304 >gi|283834568|ref|ZP_06354309.1| hydroxymethylbilane synthase [Citrobacter youngae ATCC 29220] gi|291069698|gb|EFE07807.1| hydroxymethylbilane synthase [Citrobacter youngae ATCC 29220] Length = 313 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDALMANH--PGLIVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + GL + RED RD F+S+ +L DL S Sbjct: 64 KELEVALLEKRADIAVHSMKDVPVEFPDGLGLVTICEREDPRDAFVSNKYNTLDDLPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L + R D+ + RG + TRL KL+N AI+LA AG+KRL E + Sbjct: 124 IVGTSSLRRQCQLAKRRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRV 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + + L+ +NHE+T V ERA L+G C+ Sbjct: 184 RTALPPEVSLPAVGQGAVGIECRLDDMRTRALLAPLNHEETALRVKAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 VPIGSYAELINGEIWLRALVGAPDGSQMVCGERRGAVQDAEQMGISLAEEL 294 >gi|323161134|gb|EFZ47052.1| porphobilinogen deaminase [Escherichia coli E128010] Length = 313 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 160/291 (54%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + EL+ +NH +T V ERA L+G C+ Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDTRTHELLAALNHHETALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G +A +G A+ + Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEEL 294 >gi|152978040|ref|YP_001343669.1| porphobilinogen deaminase [Actinobacillus succinogenes 130Z] gi|189042873|sp|A6VL87|HEM3_ACTSZ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|150839763|gb|ABR73734.1| porphobilinogen deaminase [Actinobacillus succinogenes 130Z] Length = 309 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 105/270 (38%), Positives = 160/270 (59%), Gaps = 2/270 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+++ +I TR SPLAL A + L +++ P + ++P+ TKGD I + L +IGG Sbjct: 1 MQQEILKIATRQSPLALWQANFVKDRLTEIY--PDLTVELVPMVTKGDVILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L++G+ D AVHS KD+P + GL +S RED RD F+S+ ++L D Sbjct: 59 KGLFVKELENALLNGDADIAVHSMKDVPMEFPAGLGLSVICKREDPRDAFVSNRYRTLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L + R D+++ RG + TRL+KL+ AI+LA AG+ RL Sbjct: 119 LPPGAIVGTSSLRRQCQLKKRRPDLNIRSLRGNVGTRLSKLDQGDYDAIILASAGLIRLA 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I + E P+ GQGA+ IE +N+ + Q+L+ + +T V ERA L Sbjct: 179 LPERIASFIETEISLPAAGQGAVGIECRINDQRVQKLLAPLADTETTACVLAERAMNNRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C+ I G+A G+ L+ +V A DG Sbjct: 239 QGGCQVPIGGYAVLNGNELHLRALVGALDG 268 >gi|311105076|ref|YP_003977929.1| porphobilinogen deaminase [Achromobacter xylosoxidans A8] gi|310759765|gb|ADP15214.1| porphobilinogen deaminase [Achromobacter xylosoxidans A8] Length = 315 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 113/299 (37%), Positives = 167/299 (55%), Gaps = 2/299 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A R L ++ P + ++ L+T+GD+I +RTL+++GGKGLF +E Sbjct: 9 IATRASRLALWQAEHVRDRLRTLY--PACAVELLTLTTRGDQILDRTLSKVGGKGLFVKE 66 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L+ G D AVHS KD+P L ++ A L R D RD F+S+T +L DL +V+ Sbjct: 67 LENALLDGRADLAVHSLKDVPVDLQAPFELCAVLDRADPRDAFVSNTHDTLADLPAGAVV 126 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR++ + ++ V RG ++TRL KL+ + AI+LA AG++RL I+ Sbjct: 127 GTSSLRRESQIRARYPELVVKPLRGNLDTRLGKLDKGEYDAIVLAAAGLERLGLGARIRS 186 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L ED P+ GQGA+ IE + + + + DT V ERA +L GSC+ Sbjct: 187 LLEPEDSLPAAGQGALGIEIRDDRDDMRAWLAPLVSADTTSCVVAERAVSRKLGGSCQVP 246 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 +A +A G TL +V + DG SR+G DA IG AAQ + +++ Sbjct: 247 LAAYAEIAGGTLSLRALVASPDGVRMVHASRSGPVADAQAIGEAAAQALLDAGAQDILR 305 >gi|163782608|ref|ZP_02177605.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1] gi|159882181|gb|EDP75688.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1] Length = 303 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 113/290 (38%), Positives = 164/290 (56%), Gaps = 5/290 (1%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 RIGTR S LAL A +S L K + ++ ++T GD+I + L +IGGKGLF + Sbjct: 4 RIGTRKSKLALWQANFVKSFL---EKKWGVEVELVKITTTGDKILDSPLAKIGGKGLFVK 60 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE+ L+ G ID AVHS KD+P + +GL + A RE+ DV +S L +L + Sbjct: 61 EIEQALMEGRIDLAVHSLKDVPMVIPEGLTLGAITEREEPHDVLLSRDGGKLLELREGAK 120 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSSLRR+ L R R D+ V RG ++TR+ KL AI+LAYAG+KR+ E + Sbjct: 121 VGTSSLRRQVQLKRLRRDLEVEVLRGNVDTRVRKLKEGMYDAIILAYAGVKRMGYEDEVT 180 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E+L+ F P+ GQG++ IE + + L++ +NH ++ CERAFL L+G C+ Sbjct: 181 EVLDY--FIPAVGQGSLAIEIREGDEETLRLIEPLNHPESRVRAECERAFLRRLEGGCQV 238 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I FA KG+TL G + +G F E G +A +G A+ + Sbjct: 239 PIGAFAQVKGNTLTVRGFISDLEGLKFIEGEEVGKPEEASELGERLAESL 288 >gi|300721444|ref|YP_003710719.1| hydroxymethylbilane synthase [Xenorhabdus nematophila ATCC 19061] gi|297627936|emb|CBJ88482.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Xenorhabdus nematophila ATCC 19061] Length = 313 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 114/293 (38%), Positives = 161/293 (54%), Gaps = 6/293 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MTMKTIRIATRQSPLAMWQAHYVQKQLQHFH--PELKVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + GL + R+D RD F+S SL D Sbjct: 59 KGLFVKELELALLEKRADIAVHSMKDVPVEFPNGLGLVTICERDDPRDAFVSVKYASLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L + R D+ + D RG + TRL+KL+N AI+LA AG+KRL Sbjct: 119 LPTGSVVGTSSLRRQCQLRQLRPDLVIRDLRGNVGTRLSKLDNGDYDAIILATAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ L E P+ GQGA+ IE +++ + +EL+ +NH T V ERA L Sbjct: 179 LEERIRMPLAPELLLPAVGQGAVGIECRLDDQQTRELLAPLNHARTEICVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 +G C+ I +A + ++ +V A DG VS G R + R A Sbjct: 239 EGGCQVPIGSYAIWQEDKIWLRALVGAPDGT----VSVRGERVVSPEEARQAG 287 >gi|295706769|ref|YP_003599844.1| porphobilinogen deaminase [Bacillus megaterium DSM 319] gi|294804428|gb|ADF41494.1| porphobilinogen deaminase [Bacillus megaterium DSM 319] Length = 310 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 118/292 (40%), Positives = 168/292 (57%), Gaps = 8/292 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP-PHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +G+R S LAL +T+ + + K P I + TKGD+I N TL+++GGKGLF + Sbjct: 6 VGSRRSKLALT---QTKWVIEQLKKQGLPFEFEIKEMVTKGDQILNVTLSKVGGKGLFVK 62 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE+ ++ EID AVHS KDMP L +GL I RED RD IS + ++L +V Sbjct: 63 EIEQAMLDEEIDMAVHSMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELPSGAV 122 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-VI 185 IGTSSLRR A LL RSDI + RG I+TRL KL N AI+LA AG+ R+ + + Sbjct: 123 IGTSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNKDYDAIILAAAGLSRMGWSRDTV 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE N+ + L++ +NH++T +V ER FL E++G C+ Sbjct: 183 TQYLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEMEGGCQ 242 Query: 246 SAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 IAG+ G + +V + DGK ++ G D + IG AA+ + Sbjct: 243 VPIAGYGRILDGGNIELTSLVASPDGKTIYKEQITGK--DPVAIGSAAAERL 292 >gi|290477117|ref|YP_003470030.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Xenorhabdus bovienii SS-2004] gi|289176463|emb|CBJ83272.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Xenorhabdus bovienii SS-2004] Length = 311 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 109/269 (40%), Positives = 154/269 (57%), Gaps = 2/269 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RI TR SPLA+ A + L H P + +IP+ T+GD I + L ++GGKGL Sbjct: 2 KIIRIATRQSPLAMWQAQYVQKQLEQFH--PELKVELIPMVTRGDVILDTPLAKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ D AVHS KD+P + GL + R D RD F+S SL +L + Sbjct: 60 FVKELELALLENRADIAVHSMKDVPVEFPDGLGLVTICERGDPRDAFVSVKYTSLDELPI 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S++GTSSLRR+ L + R D+ V D RG + TRL KL+N AI+LA AG+KRL E Sbjct: 120 GSIVGTSSLRRQCQLRQLRPDLVVRDLRGNVGTRLGKLDNGDYDAIILAAAGLKRLGLED 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L E P+ GQGA+ IE +++ + +EL+ +NH T V ERA L+G Sbjct: 180 RIRMPLEPELLLPAVGQGAVGIECRLDDKQTRELLAPLNHTGTEICVLAERAMNTHLEGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKI 272 C+ I +A +G+ ++ +V A DG I Sbjct: 240 CQVPIGSYAIWQGNNIWLRALVGAPDGSI 268 >gi|326388534|ref|ZP_08210128.1| porphobilinogen deaminase [Novosphingobium nitrogenifigens DSM 19370] gi|326206999|gb|EGD57822.1| porphobilinogen deaminase [Novosphingobium nitrogenifigens DSM 19370] Length = 309 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 111/266 (41%), Positives = 151/266 (56%), Gaps = 4/266 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR SPLA+A A ETR+ L H P + ++P+ GDRI +R L EIGGK L+T Sbjct: 1 MRLGTRQSPLAMAQAEETRARLCAAHGWPVDAVELVPVVASGDRIQDRPLAEIGGKALWT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ L G ID AVHS KD+ T + L I+A LPR D+RDV + A S+ D+ + Sbjct: 61 KELDAWLAEGTIDAAVHSMKDVETLRPETLTIAAVLPRADVRDVLVG--AASVADIPTGA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTS+ RR A +L R D++V+ FRG + TRL KL +A LLA AG+ RL E I Sbjct: 119 RVGTSAPRRAAQMLHARPDLTVVSFRGNVATRLGKLERGEADVTLLAAAGLVRL-GETGI 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ E + P+P QGAI IE L I+ T ++ ERA L L G+C Sbjct: 178 GTPLDAETWLPAPAQGAIGIECLAARADLLSLFAAIDDAPTHAAIRAERALLTGLGGTCH 237 Query: 246 SAIAGFAYCKGST-LYFYGIVLASDG 270 S IA +G T L+ + + DG Sbjct: 238 SPIAVLTRPEGDTELFLRAALFSPDG 263 >gi|294501421|ref|YP_003565121.1| porphobilinogen deaminase [Bacillus megaterium QM B1551] gi|294351358|gb|ADE71687.1| porphobilinogen deaminase [Bacillus megaterium QM B1551] Length = 310 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 118/292 (40%), Positives = 169/292 (57%), Gaps = 8/292 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP-PHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +G+R S LAL +T+ + + K P I + TKGD+I N TL+++GGKGLF + Sbjct: 6 VGSRRSKLALT---QTKWVIEQLKKQGLPFEFEIKEMVTKGDQILNVTLSKVGGKGLFVK 62 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE+ ++ EID AVHS KDMP L +GL I RED RD IS + ++L +V Sbjct: 63 EIEQAMLDKEIDMAVHSMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELPSGAV 122 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-VI 185 IGTSSLRR A LL RSDI + RG I+TRL KL N AI+LA AG+ R+ K + Sbjct: 123 IGTSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNEDYDAIILAAAGLSRMGWSKDTV 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE N+ + L++ +NH++T +V ER FL E++G C+ Sbjct: 183 TQYLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEMEGGCQ 242 Query: 246 SAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 IAG+ G + +V + DGK ++ G + + IG +AA+ + Sbjct: 243 VPIAGYGRILDGGNIELTSLVASPDGKTIYKEHITGK--NPVAIGSEAAERL 292 >gi|291288798|ref|YP_003505614.1| porphobilinogen deaminase [Denitrovibrio acetiphilus DSM 12809] gi|290885958|gb|ADD69658.1| porphobilinogen deaminase [Denitrovibrio acetiphilus DSM 12809] Length = 308 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 116/300 (38%), Positives = 168/300 (56%), Gaps = 5/300 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 I TR S LAL A+ TR L H + NI+ TKGD+I + L +IGGKGLF + Sbjct: 6 IATRGSNLALWQAYYTRDRLQKEHGVEVELNII----KTKGDKILDVPLAKIGGKGLFVK 61 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE+ LI G+ D AVHS KD+P ++ +GL++ A D F+S + +L +V Sbjct: 62 EIEQALIDGKADIAVHSMKDVPMEMPEGLELYASPEGASPYDCFVSVKYNEVVELPQGAV 121 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSSLRRK LL+ R D+ + D RG + TRL KL + I+LA AG+ RL+ VIK Sbjct: 122 VGTSSLRRKLQLLKMRPDLVIKDLRGNVNTRLAKLEAGEFDGIVLAKAGLVRLELGHVIK 181 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E + P+ QGA+ + N+ + +EL++ + T V+ ERAFL L+G C++ Sbjct: 182 ETFTADQMLPACCQGALGFQIRANDTRMKELLRFMKDPATETKVSMERAFLRRLEGGCQA 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 IAG + GS + GIV A DG+ F E G+ DA +G + A+ + K++ Sbjct: 242 PIAGHSVLTGSKICMKGIVAALDGRTFIEQFIEGHAEDAEKLGLELAERVLNAGAKDILE 301 >gi|217975048|ref|YP_002359799.1| porphobilinogen deaminase [Shewanella baltica OS223] gi|304412540|ref|ZP_07394146.1| porphobilinogen deaminase [Shewanella baltica OS183] gi|307307199|ref|ZP_07586937.1| porphobilinogen deaminase [Shewanella baltica BA175] gi|254800258|sp|B8E879|HEM3_SHEB2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|217500183|gb|ACK48376.1| porphobilinogen deaminase [Shewanella baltica OS223] gi|304349182|gb|EFM13594.1| porphobilinogen deaminase [Shewanella baltica OS183] gi|306910438|gb|EFN40869.1| porphobilinogen deaminase [Shewanella baltica BA175] Length = 310 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 110/306 (35%), Positives = 170/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +S+ + Sbjct: 59 KGLFVKELEVAMLDDLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+ + R D+ + D RG + TRL KL+N + AI+LA AG+ RLK Sbjct: 119 LPLGATVGTSSLRRQCQIRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++ E+ P+ GQGA+ IE +N+ + + L+ + H +T V ERA L Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRINDERVKALLAPLEHLETRYRVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA G + G+V DG E G + +A +G A+ + Sbjct: 239 EGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTEATQLGVALAEELLSKG 298 Query: 301 NKNVFN 306 K++ + Sbjct: 299 AKSILD 304 >gi|254418576|ref|ZP_05032300.1| porphobilinogen deaminase [Brevundimonas sp. BAL3] gi|196184753|gb|EDX79729.1| porphobilinogen deaminase [Brevundimonas sp. BAL3] Length = 317 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 111/270 (41%), Positives = 158/270 (58%), Gaps = 5/270 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNI-VIIPLS---TKGDRITNRTLTEIGG 60 P RIGTR S LALA + + ++ + I +PL T GDRI +R L E+GG Sbjct: 4 PLRIGTRRSKLALAQSGMMQRAIGRALGVAEAEIEAAVPLVEIVTTGDRIQDRRLMEMGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K LFT+EIE+ L+ ID A+HS KD+P + +GL I+A RED RD FIS S Sbjct: 64 KALFTKEIEEALLDRRIDIAIHSMKDVPAEQPEGLCIAAIPEREDARDAFISRDFDSFDQ 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRR+A L R D+ V RG I+TRL + AILLA +G+ RL Sbjct: 124 LPFGARLGTASLRRQAQALALRPDLKVEMLRGNIDTRLRRAAEGDFDAILLAVSGMTRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+E L+++ F P+PGQGA+ I+T ++ A V +NH +T +V ER + L Sbjct: 184 VTEHIREKLSLDAFLPAPGQGALAIQTRADDIDAP-WVAALNHPETAVAVAAERGAMTAL 242 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 +GSC++A+ +A +G TL +L+ DG Sbjct: 243 EGSCRTAVGAYALIEGDTLRLTTEMLSPDG 272 >gi|328952141|ref|YP_004369475.1| Porphobilinogen deaminase [Desulfobacca acetoxidans DSM 11109] gi|328452465|gb|AEB08294.1| Porphobilinogen deaminase [Desulfobacca acetoxidans DSM 11109] Length = 311 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 108/263 (41%), Positives = 152/263 (57%), Gaps = 2/263 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RIGTR S LALA A + + + P + + + T GD+I + L +IGGKG Sbjct: 2 KNHLRIGTRGSALALAQAAWVQQQIQ--GRYPQITVDLEIIKTTGDKIQDVALAKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+EIE ++SGE+D VHS KD+PT++ GL I RED RD FIS +SL ++ Sbjct: 60 LFTKEIEMAILSGEVDLGVHSMKDVPTEIPLGLVIGITTVREDPRDAFISRKYRSLAEIP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 L IGT SLRR+A LL R D+ ++ RG ++TRL KL AI+LA AG+ RL + Sbjct: 120 LGGRIGTGSLRRRAQLLHLRPDLEIVPLRGNVDTRLRKLTEADLDAIILAAAGLHRLGRA 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I IL P+ GQGA+ +E ++ EL++ ++ +T +V ERAFLA L+G Sbjct: 180 AEITAILPETQMLPAIGQGALGLEYRQDDAVTMELLEFLDDPETRVAVAAERAFLARLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIV 265 C+ IA K L+ G++ Sbjct: 240 GCQVPIAAMGTLKKGELFLDGLI 262 >gi|255320960|ref|ZP_05362133.1| porphobilinogen deaminase [Acinetobacter radioresistens SK82] gi|262379948|ref|ZP_06073103.1| porphobilinogen deaminase [Acinetobacter radioresistens SH164] gi|255301924|gb|EET81168.1| porphobilinogen deaminase [Acinetobacter radioresistens SK82] gi|262298142|gb|EEY86056.1| porphobilinogen deaminase [Acinetobacter radioresistens SH164] Length = 307 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 110/291 (37%), Positives = 165/291 (56%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGLF Sbjct: 5 LKIATRKSPLALWQAEHIRACLQELH--PGLTVELVTFVTQGDKILDTPLAKIGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P L GL + RED D F+S+ + + L + Sbjct: 63 KELEAALLDGRADLAVHSMKDVPMHLPTGLSLPVICEREDPCDAFVSNRFEGFEQLPKGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRRK +L+ R D++++D RG + TRL+KL+ + AI+LA AG+KRL + I Sbjct: 123 TVGTSSLRRKTQILKARPDLNILDLRGNVGTRLSKLDAGEYDAIILASAGLKRLGLSERI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 K L+ E P+ GQGA+ +E ++ +L+ + HE T V ERAF + L+G C+ Sbjct: 183 KHTLSPELSLPAVGQGALGLECRTDDQAILDLISPLQHEQTSICVRAERAFNSHLEGGCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 IA +A + L G V + DG I +G A +G + A+ + Sbjct: 243 VPIAAYATLENGQLQLEGRVGSVDGLILLSSQVSGQPEHAEQLGIELAENL 293 >gi|123440582|ref|YP_001004576.1| porphobilinogen deaminase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332159812|ref|YP_004296389.1| porphobilinogen deaminase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|158512667|sp|A1JI86|HEM3_YERE8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|122087543|emb|CAL10324.1| porphobilinogen deaminase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318607646|emb|CBY29144.1| porphobilinogen deaminase [Yersinia enterocolitica subsp. palearctica Y11] gi|325664042|gb|ADZ40686.1| porphobilinogen deaminase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862558|emb|CBX72712.1| porphobilinogen deaminase [Yersinia enterocolitica W22703] Length = 313 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 113/293 (38%), Positives = 162/293 (55%), Gaps = 2/293 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S L + Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSINYAHLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + HAI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDKGEYHAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH +T V ERA L Sbjct: 179 LETRIRYAMPAEESLPAVGQGAVGIECRLDDNFTRQLLAPLNHRETELRVCAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 +G C+ I +A G TL+ +V A DG R G +A +G + A Sbjct: 239 EGGCQVPIGSYAELDGDTLWLRALVGAPDGSEIIRGERRGPAENAEQMGVELA 291 >gi|191166073|ref|ZP_03027908.1| porphobilinogen deaminase [Escherichia coli B7A] gi|190903849|gb|EDV63563.1| porphobilinogen deaminase [Escherichia coli B7A] Length = 313 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 160/291 (54%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH T V ERA L+G C+ Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHKTALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G +A +G A+ + Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEEL 294 >gi|325272336|ref|ZP_08138739.1| porphobilinogen deaminase [Pseudomonas sp. TJI-51] gi|324102530|gb|EGB99973.1| porphobilinogen deaminase [Pseudomonas sp. TJI-51] Length = 313 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 111/296 (37%), Positives = 163/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAH--PELRVTLVPMVSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+ SL+ Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNHFASLEA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + L+ ++H DT D V ERA L Sbjct: 179 FEDRITATISVDDSLPAGGQGAVGIECRSADHAIHALLAPLHHHDTADRVVAERAMNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IA +A +G L+ G+V G R A +G + A+++ Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRATAEALGVEVAEHL 294 >gi|309796256|ref|ZP_07690666.1| porphobilinogen deaminase [Escherichia coli MS 145-7] gi|308120138|gb|EFO57400.1| porphobilinogen deaminase [Escherichia coli MS 145-7] Length = 320 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 160/291 (54%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 131 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH T V ERA L+G C+ Sbjct: 191 RAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHKTALRVTAERAMNTRLEGGCQ 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G +A +G A+ + Sbjct: 251 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEEL 301 >gi|126176187|ref|YP_001052336.1| porphobilinogen deaminase [Shewanella baltica OS155] gi|153002481|ref|YP_001368162.1| porphobilinogen deaminase [Shewanella baltica OS185] gi|166217785|sp|A3D9Q4|HEM3_SHEB5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166217786|sp|A6WTG0|HEM3_SHEB8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|125999392|gb|ABN63467.1| porphobilinogen deaminase [Shewanella baltica OS155] gi|151367099|gb|ABS10099.1| porphobilinogen deaminase [Shewanella baltica OS185] Length = 310 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 110/306 (35%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +S+ + Sbjct: 59 KGLFVKELEVAMLDDLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+ + R D+ + D RG + TRL KL+N + AI+LA AG+ RLK Sbjct: 119 LPLGATVGTSSLRRQCQIRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++ E+ P+ GQGA+ IE +N+ + + L+ + H +T V ERA L Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRINDERVKALLAPLEHLETRYRVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA G + G+V DG E G + +A +G A+ + Sbjct: 239 EGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTEATQLGVALAEELLSKG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKTILD 304 >gi|59710673|ref|YP_203449.1| porphobilinogen deaminase [Vibrio fischeri ES114] gi|197333951|ref|YP_002154835.1| porphobilinogen deaminase [Vibrio fischeri MJ11] gi|75431912|sp|Q5E8T5|HEM3_VIBF1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226706298|sp|B5FF97|HEM3_VIBFM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|59478774|gb|AAW84561.1| hydroxymethylbilane synthase [Vibrio fischeri ES114] gi|197315441|gb|ACH64888.1| porphobilinogen deaminase [Vibrio fischeri MJ11] Length = 311 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 106/295 (35%), Positives = 165/295 (55%), Gaps = 2/295 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++ P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QQLPVRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+T ++ +L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNTYNNIDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ L R D+ + + RG + TRL KL++ AI+LA AG+ RL Sbjct: 121 PQGAVVGTCSLRRQCQLKEARPDLIIKELRGNVGTRLQKLDDGNYDAIILACAGLIRLGL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E IK + E P+ GQGA+ IE +++ + + L++ +NH +T + V CERA L+ Sbjct: 181 EDRIKSAIEPEQSLPAVGQGAVGIEARLDDDRLRALLEPLNHPETANRVLCERAMNNRLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 G C+ I ++ G ++ +V DG + +G DA +G A + Sbjct: 241 GGCQVPIGSYSLIDGDQIWLRALVGEPDGSVMIRGEVSGPVSDAEALGTQLADQL 295 >gi|262040885|ref|ZP_06014111.1| hydroxymethylbilane synthase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041774|gb|EEW42819.1| hydroxymethylbilane synthase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 318 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 109/289 (37%), Positives = 163/289 (56%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +I TR SPLAL A ++ L H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLKVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + + L + R+D RD F+S+ S+ + Sbjct: 64 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPECLGLVTICERDDPRDAFVSNRYASIDE 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+++ RG + TRL+KL+N + AI+LA AG+KRL+ Sbjct: 124 LPAGSVVGTSSLRRQCQLAATRPDLAIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLQ 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L+ E P+ GQGA+ IE +++ + L+ +NH +T V ERA L Sbjct: 184 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTRGLLAPLNHTETAVRVRAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I +A K L+ +V A DG R G A +G Sbjct: 244 EGGCQVPIGSYAELKDGELWLRALVGAPDGSQLVRGERRGPAEQAEALG 292 >gi|157144433|ref|YP_001451752.1| porphobilinogen deaminase [Citrobacter koseri ATCC BAA-895] gi|157081638|gb|ABV11316.1| hypothetical protein CKO_00147 [Citrobacter koseri ATCC BAA-895] Length = 318 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 110/291 (37%), Positives = 161/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + +L+ H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 11 LRIATRQSPLALWQAHYVKDALIAQH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L +L S Sbjct: 69 KELEVALLEKRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNQYNNLDELPAGS 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+KRL I Sbjct: 129 IVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLGLTSRI 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + Q L+ +NHE+T V ERA L+G C+ Sbjct: 189 RTALPPEISLPAVGQGAVGIECRLDDARTQALLAPLNHEETALRVKAERAMNTRLEGGCQ 248 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG R G DA +G A+ + Sbjct: 249 VPIGSYAEIIDGEVWLRALVGAPDGSQMIRGERRGLPQDAAQMGISLAEEL 299 >gi|215484908|ref|YP_002327147.1| porphobilinogen deaminase [Acinetobacter baumannii AB307-0294] gi|301346814|ref|ZP_07227555.1| porphobilinogen deaminase [Acinetobacter baumannii AB056] gi|301512648|ref|ZP_07237885.1| porphobilinogen deaminase [Acinetobacter baumannii AB058] gi|301595532|ref|ZP_07240540.1| porphobilinogen deaminase [Acinetobacter baumannii AB059] gi|332851472|ref|ZP_08433469.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6013150] gi|332866846|ref|ZP_08437233.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6013113] gi|213987600|gb|ACJ57899.1| porphobilinogen deaminase [Acinetobacter baumannii AB307-0294] gi|332729925|gb|EGJ61256.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6013150] gi|332734374|gb|EGJ65495.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6013113] Length = 309 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 108/293 (36%), Positives = 167/293 (56%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L + H P + ++ T+GD+I + L +IGGKGL Sbjct: 6 KTLKIATRQSPLALWQAEHIRARLQERH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 64 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL + Sbjct: 124 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G Sbjct: 184 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGG 243 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ IAG+A + ++ G V + DG+ +A +G + A+ + Sbjct: 244 CQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNL 296 >gi|169797472|ref|YP_001715265.1| porphobilinogen deaminase [Acinetobacter baumannii AYE] gi|213155714|ref|YP_002317759.1| porphobilinogen deaminase [Acinetobacter baumannii AB0057] gi|169150399|emb|CAM88296.1| porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Acinetobacter baumannii AYE] gi|213054874|gb|ACJ39776.1| porphobilinogen deaminase [Acinetobacter baumannii AB0057] Length = 314 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 108/293 (36%), Positives = 167/293 (56%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L + H P + ++ T+GD+I + L +IGGKGL Sbjct: 11 KTLKIATRQSPLALWQAEHIRARLQERH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 69 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL + Sbjct: 129 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G Sbjct: 189 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGG 248 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ IAG+A + ++ G V + DG+ +A +G + A+ + Sbjct: 249 CQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNL 301 >gi|194469126|ref|ZP_03075110.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205358767|ref|ZP_02658924.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194455490|gb|EDX44329.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205332052|gb|EDZ18816.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 313 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 110/291 (37%), Positives = 157/291 (53%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL L S Sbjct: 64 KELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDVLPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L+G C+ Sbjct: 184 RTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG + R G+ A +G A+ + Sbjct: 244 VPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEEL 294 >gi|254455286|ref|ZP_05068715.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. HTCC7211] gi|207082288|gb|EDZ59714.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. HTCC7211] Length = 305 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 110/300 (36%), Positives = 177/300 (59%), Gaps = 4/300 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K IG+R S LAL +A + + ++ I +I+I ++TKGD++ + L+E+GGKGL Sbjct: 3 KKITIGSRGSKLALIYAQKAKDKIIQNTNIKDEDIIIKEITTKGDQVQDMRLSEVGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F+ IEK+L +ID AVH+ KDMP GL+ + +L R D R++ I+ + + L +L + Sbjct: 63 FSTNIEKELQDKKIDIAVHALKDMPAIETVGLRTNTFLKRNDPREILIAQSGKKLNELKI 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +S+IGTSS RR+ + + RSDI+ RG ++TR+ KLN+ AI+L+YAGIK L+ E Sbjct: 123 NSIIGTSSYRREFQIKKIRSDINCKLIRGNVDTRIKKLNDGLYDAIILSYAGIKSLEIED 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I EI +IE+ PS GQG I ++ N+ + ++ IN ++T + ER L L+G Sbjct: 183 KITEIFSIEEIIPSAGQGIIALQCRNNDIEIISVLDEINDKETSSMAHAERNVLKVLEGD 242 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C++AI A + + + + DGK F + S N DA +G++ + ++ SN Sbjct: 243 CETAIGTHAIIEEDKIILQAELFSLDGKQRFFEKKSSKIN--DARELGKELGEILKTKSN 300 >gi|238793582|ref|ZP_04637206.1| Porphobilinogen deaminase [Yersinia intermedia ATCC 29909] gi|238727172|gb|EEQ18702.1| Porphobilinogen deaminase [Yersinia intermedia ATCC 29909] Length = 313 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 112/289 (38%), Positives = 160/289 (55%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S + D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPVAFPEGLGLVTICERDDPRDAFVSPHFAHIDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ + E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L Sbjct: 179 LASRIRYAMPAEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRVTELRVCAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I +A +G+TL+ G+V A DG R G +A +G Sbjct: 239 EGGCQVPIGSYAELEGNTLWLRGLVGAPDGSEIIRGERRGPAENAEQMG 287 >gi|77461708|ref|YP_351215.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf0-1] gi|123602840|sp|Q3K4T0|HEM3_PSEPF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|77385711|gb|ABA77224.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf0-1] Length = 313 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 109/275 (39%), Positives = 160/275 (58%), Gaps = 3/275 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEAAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYSSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLTRRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSADTEIHALLAPLHHADTADRVTAERALNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIV-LASDGKIFH 274 +G C+ IA +A +G L+ G+V S GK+ + Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGEPSGGKLLN 273 >gi|167031229|ref|YP_001666460.1| porphobilinogen deaminase [Pseudomonas putida GB-1] gi|189028150|sp|B0KH05|HEM3_PSEPG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166857717|gb|ABY96124.1| porphobilinogen deaminase [Pseudomonas putida GB-1] Length = 313 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 111/294 (37%), Positives = 162/294 (55%), Gaps = 2/294 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHADTADRVVAERALNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 +G C+ IA +A +G L+ G+V G R A +G A+ Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRTAAETLGVQVAE 292 >gi|322421444|ref|YP_004200667.1| porphobilinogen deaminase [Geobacter sp. M18] gi|320127831|gb|ADW15391.1| porphobilinogen deaminase [Geobacter sp. M18] Length = 318 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 109/290 (37%), Positives = 164/290 (56%), Gaps = 5/290 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A +S L + P + + + T GD+I + L ++GG Sbjct: 1 MALKELRIGTRASQLALWQANWVKSELE--KRYPDMTVTLKKIKTIGDKILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD IS + D Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISRGVK-FAD 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A LL+ R D+ ++ RG ++TR++KL A++LA AG+ RL Sbjct: 118 LPQGARIGTSALRRQAQLLKVRPDLEMVIIRGNVQTRMDKLETEGLDAVILAAAGLNRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E+L + P+ GQGA+ IE ++N + ++ + NH DT +V ERA L Sbjct: 178 FADQITELLPTDLSLPAIGQGALGIECSLSNEEVKDAISFFNHPDTSRAVRAERALLWRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE--VSRNGNRCDAINI 288 +G C+ IA + G L G + + DGK+ + V+ + C+ + + Sbjct: 238 EGGCQVPIAAYGEVTGDQLKLTGFIASVDGKVSVKGVVTGPADECEKLGV 287 >gi|183600277|ref|ZP_02961770.1| hypothetical protein PROSTU_03837 [Providencia stuartii ATCC 25827] gi|188020068|gb|EDU58108.1| hypothetical protein PROSTU_03837 [Providencia stuartii ATCC 25827] Length = 314 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 106/265 (40%), Positives = 155/265 (58%), Gaps = 2/265 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A+ + L H P + ++P+ TKGD I + L ++GGKGLF Sbjct: 7 VRIATRKSPLALWQAYFVKEKLEQFH--PGLQVELVPMVTKGDIILDTPLAKVGGKGLFV 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 65 KELELALLEKRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQYDSLDALPAGS 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 125 VVGTSSLRRQCQLRELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLEARI 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + ++L++ +N ++T V ERA L+G C+ Sbjct: 185 RTALAPEQSLPAVGQGAVGIECRLDDERTRQLLEKLNDDNTSVCVLAERAMNMRLEGGCQ 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270 I +A + ++ +V A DG Sbjct: 245 VPIGSYAIWQDGQIWLRALVGAPDG 269 >gi|163797975|ref|ZP_02191917.1| Porphobilinogen deaminase [alpha proteobacterium BAL199] gi|159176769|gb|EDP61340.1| Porphobilinogen deaminase [alpha proteobacterium BAL199] Length = 321 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 111/303 (36%), Positives = 159/303 (52%), Gaps = 5/303 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R SPLAL E R L I + + T GD + +R L EIGGKGLF +E Sbjct: 17 LGSRGSPLALRQTHEVRDRLAAAWPELAGAIAVQEIRTTGDAVRDRPLAEIGGKGLFIKE 76 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ L++G+ID AVHS KDM T + + A LPRED RD ++S A + DL + I Sbjct: 77 IEQALMAGQIDAAVHSMKDMETTIAPASVLVAVLPREDPRDAWLSPIADRVDDLPSGAKI 136 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+S+RR A +L R D+ V+ FRG ++TRL KL + LA AG+ RL Sbjct: 137 GTASVRRAAQVLNRRPDLQVVLFRGNVDTRLRKLAEGEVAGTFLAAAGLSRLGMLDKATR 196 Query: 188 ILNIEDFPPSPGQGAICI-----ETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 IL +++ P+ QGAI + E + + + + +++ + V ERA LA LDG Sbjct: 197 ILEVDEMLPAVSQGAIGVQCRDGEASARDAEIRNWLSILDDRPSRLRVTAERAMLATLDG 256 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC++ IAG A G+ L G+V + DG+ H D +GR + I + Sbjct: 257 SCRTPIAGHATLGGARLTLSGMVFSLDGQSSHGAVDTSATDDPEALGRTVGEAILARGGR 316 Query: 303 NVF 305 N Sbjct: 317 NFL 319 >gi|148655885|ref|YP_001276090.1| porphobilinogen deaminase [Roseiflexus sp. RS-1] gi|166217784|sp|A5UU37|HEM3_ROSS1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|148567995|gb|ABQ90140.1| hydroxymethylbilane synthase [Roseiflexus sp. RS-1] Length = 303 Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 102/287 (35%), Positives = 161/287 (56%), Gaps = 3/287 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ IGTR S LAL + R +L H P + + ++T+GD I +R L IG KG Sbjct: 2 KQTLIIGTRASKLALVQTYMVRDALQSAH--PGLTVAVEHITTRGDIILDRPLNAIGDKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF EIE+ + +G ID AVHSAKD+P+ L + ++A R D RD ++ +L L Sbjct: 60 LFVVEIEEAMRAGRIDLAVHSAKDLPSVLPPDMTLAACPRRADPRDALVAQPGMTLAALP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR L R D++++D RG ++TRL KL + AI+LA AG+KRL + Sbjct: 120 SGARVGTSSLRRACQLRALRPDLTLVDLRGNVDTRLRKLREGQYDAIVLAAAGLKRLGLD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E++ + P+ GQG I +E ++ + L+ ++ + ++ ERAFLA + G Sbjct: 180 GAISELIEPDVLIPAVGQGVIGVEARADDEEVLRLLAPLDDQAARIAITAERAFLARIGG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 C+ + A+ +G L G++ A DG++ + R G+ D + +G Sbjct: 240 GCQVPVGALAHLEGDELLLRGMIGARDGRMVRGMQR-GSASDPVGLG 285 >gi|325690356|gb|EGD32360.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK115] Length = 306 Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 114/310 (36%), Positives = 172/310 (55%), Gaps = 16/310 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVEQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q+L DL Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLG-- 177 Query: 183 KVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + + +L+I+ P+ QGA+ +E + + ++L+ + E T V ERA L Sbjct: 178 WLDQSLLHIQPLETRLCLPAISQGALAVEYREEDEELRKLLATVQDEKTAAEVAVERAVL 237 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 A+++ C IA A KG ++ DG+ VS G + A Q +R Sbjct: 238 AQMNADCTFPIAALAQKKGQDYQLEAMLAKEDGQCVF-VSLQGQDGQEL-----AEQAVR 291 Query: 298 FISNKNVFNF 307 +++K Sbjct: 292 QLADKGAVGM 301 >gi|121535332|ref|ZP_01667145.1| porphobilinogen deaminase [Thermosinus carboxydivorans Nor1] gi|121306118|gb|EAX47047.1| porphobilinogen deaminase [Thermosinus carboxydivorans Nor1] Length = 317 Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 117/303 (38%), Positives = 167/303 (55%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K IGTR S LAL A L H P + I + T GD+I + L +IGGKG Sbjct: 2 KNKLVIGTRGSKLALWQANYIAHRLCQYH--PGLEVTIKHIVTTGDKILDVPLAKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT+EIE ++ GEID AVHS KDMPT+L GL ++A RE+ D IS +L L Sbjct: 60 VFTKEIELAMLRGEIDLAVHSLKDMPTELPPGLTLAAITEREEPFDALISPKYGTLDKLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR+A LL R D++V D RG ++TRL KL + AI+LA AG+KRL + Sbjct: 120 HGAKVGTSSLRRRAQLLNCRPDLTVCDLRGNVDTRLRKLETEELDAIVLAQAGLKRLGWD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + L + P+ GQGA+ +ET ++ + LV ++ EDT +V ER+FL EL+G Sbjct: 180 DRITQQLPPDICLPAVGQGALALETRSDDSEVLALVAFLHDEDTAAAVTAERSFLNELEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I + + L +L+ DG + G A ++GR AQ++ + Sbjct: 240 GCQVPIGVYGRVENGELVLDAAILSLDGAAALKDRICGAPAAAEDLGRKLAQHMYVTGGR 299 Query: 303 NVF 305 + Sbjct: 300 EIL 302 >gi|269137476|ref|YP_003294176.1| porphobilinogen deaminase [Edwardsiella tarda EIB202] gi|267983136|gb|ACY82965.1| porphobilinogen deaminase [Edwardsiella tarda EIB202] gi|304557549|gb|ADM40213.1| Porphobilinogen deaminase [Edwardsiella tarda FL6-60] Length = 317 Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 112/284 (39%), Positives = 152/284 (53%), Gaps = 2/284 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A R L+ P I ++P+ T+GD + + L ++GGKGLF Sbjct: 12 LRIATRQSPLALWQAHYVRDQLL--THWPQLTIELVPMVTRGDVLLDTPLAKVGGKGLFV 69 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P GL + RED RD F+S SL+ L S Sbjct: 70 KELELALLEGRADIAVHSMKDVPVAFPDGLGLVTICQREDPRDAFVSPRFASLEQLPPGS 129 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ L R D+ + D RG + TRL KL+ AI+LA AG+KRL+ + I Sbjct: 130 VVGTSSLRRQCQLRAARPDLQIRDLRGNVGTRLAKLDAGDYDAIILAAAGLKRLQLDDRI 189 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE + + + L+ +NH DT V ERA L+G C+ Sbjct: 190 RTPLTPEQSLPAVGQGAVGIECRLADDATRRLLAPLNHADTALRVCAERAMNTRLEGGCQ 249 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 I +A G L+ +V A DG R G A +G Sbjct: 250 VPIGSYAEIDGDQLWLRALVGAPDGSRIIRGERRGPLTQAEAMG 293 >gi|148204|gb|AAA67601.1| porphobilinogen deaminase [Escherichia coli str. K-12 substr. MG1655] Length = 320 Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 160/291 (54%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 13 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDXPLAKVGGKGLFV 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 71 KELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 131 IVGTSSLRRQCQLGERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 191 RAGLPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQ 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V DG R G DA +G A+ + Sbjct: 251 VPIGSYAELIDGEIWLRALVGRPDGSQIIRGERRGAPQDAEQMGISLAEEL 301 >gi|237801592|ref|ZP_04590053.1| porphobilinogen deaminase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024452|gb|EGI04508.1| porphobilinogen deaminase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 313 Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 110/296 (37%), Positives = 165/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A +S L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSTREIRIATRQSALALWQAEYVKSRLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLEDRADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFDSLQA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I +++ED P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FEDRITSAISVEDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IA +A +G ++ G+V G + + A +G + A+ + Sbjct: 239 NGGCQVPIACYAILEGDDVWLRGLVGDPSGSVLLHAEARAPQTSAQALGVEVAEAL 294 >gi|120600512|ref|YP_965086.1| porphobilinogen deaminase [Shewanella sp. W3-18-1] gi|146294670|ref|YP_001185094.1| porphobilinogen deaminase [Shewanella putrefaciens CN-32] gi|158512986|sp|A1RPD7|HEM3_SHESW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166217787|sp|A4YBG2|HEM3_SHEPC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|120560605|gb|ABM26532.1| porphobilinogen deaminase [Shewanella sp. W3-18-1] gi|145566360|gb|ABP77295.1| porphobilinogen deaminase [Shewanella putrefaciens CN-32] gi|319427906|gb|ADV55980.1| porphobilinogen deaminase [Shewanella putrefaciens 200] Length = 310 Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 110/306 (35%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ + D AVHS KD+P +GL + RED RD F+S+ +++ + Sbjct: 59 KGLFVKELEVAILEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNIYKTISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+ RLK Sbjct: 119 LPLGATVGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I ++ E P+ GQGA+ IE N+ + + L+ + H +T V ERA L Sbjct: 179 LSGRIASFISAEQSLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA G + G+V DG E G + +A +G A+ + Sbjct: 239 EGGCQVPIGAFAEINGDEMTLRGLVGNPDGSEIIEGIITGPKTEATQLGVALAEELLSKG 298 Query: 301 NKNVFN 306 K++ + Sbjct: 299 AKSILD 304 >gi|161505549|ref|YP_001572661.1| porphobilinogen deaminase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189028154|sp|A9MJ10|HEM3_SALAR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|160866896|gb|ABX23519.1| hypothetical protein SARI_03714 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 313 Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 110/291 (37%), Positives = 156/291 (53%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +I TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LKIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL DL S Sbjct: 64 KELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNQYHSLDDLPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLASRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGAI IE +++ + L+ +NH T V ERA L+G C+ Sbjct: 184 RTALPPEVSLPAVGQGAIGIECRLDDARTHALLAPLNHPQTALRVTAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A ++ +V A DG + R G+ A +G A+ + Sbjct: 244 VPIGSYAEIFNGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEEL 294 >gi|242237686|ref|YP_002985867.1| porphobilinogen deaminase [Dickeya dadantii Ech703] gi|242129743|gb|ACS84045.1| porphobilinogen deaminase [Dickeya dadantii Ech703] Length = 313 Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 106/284 (37%), Positives = 157/284 (55%), Gaps = 2/284 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L H P + ++P+ T+GD + + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVQQRLQACH--PGLRVELVPMVTRGDVLLDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + L + R+D RD F+S+ +L L + Sbjct: 64 KELELALLEDRADIAVHSMKDVPVEFPAQLGLVTICERDDPRDAFVSNRYANLDALPPGA 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+ RL E I Sbjct: 124 VVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLGKLDNGDYDAIILAVAGLNRLGLEGRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L+ E P+ GQGA+ +E +++ + + L+ +NH+DT V ERA L+G C+ Sbjct: 184 RAALSPEQSLPAVGQGAVGVECRLDDTRTRALLAPLNHDDTAARVLAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 I +A +G ++ +V + DG R G R DA +G Sbjct: 244 VPIGSYAELQGDAIWLRALVGSPDGSRIIRGERTGRRQDAEQLG 287 >gi|90406695|ref|ZP_01214888.1| porphobilinogen deaminase [Psychromonas sp. CNPT3] gi|90312148|gb|EAS40240.1| porphobilinogen deaminase [Psychromonas sp. CNPT3] Length = 311 Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 162/296 (54%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A +S L+ H P + ++ + TKGD+I + L ++GG Sbjct: 1 MSNKIIRIATRHSPLAMWQANFVKSELLKWH--PELQVELLAMKTKGDKILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL ++ RED RD F+S+ ++ Sbjct: 59 KGLFVKELEVAILEGRADIAVHSMKDVPVDFPEGLGLAVICEREDPRDAFVSNHFANIAA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R DI V D RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPQGSVVGTSSLRRQCQLRAQRPDIKVKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLD 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++E+ P+ GQGA+ IE +++ + L+K + H T V ERA L Sbjct: 179 MHDRIASYMSVEESLPAVGQGAVGIECRLDDMQTLALLKPLEHRITRLRVTAERAMNLAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 G C+ I + K TL+ G+V + DG G DA +G + AQ + Sbjct: 239 QGGCQVPIGSYCILKEDTLWLRGLVGSVDGTHIIRKEIRGKVADAEQMGLNLAQQL 294 >gi|254784450|ref|YP_003071878.1| hydroxymethylbilane synthase [Teredinibacter turnerae T7901] gi|237686105|gb|ACR13369.1| hydroxymethylbilane synthase [Teredinibacter turnerae T7901] Length = 324 Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 112/289 (38%), Positives = 170/289 (58%), Gaps = 6/289 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR S LAL A +S L H P + ++PL+++GD+I + L ++GGKG Sbjct: 15 KHTLRIATRKSALALWQAEFVKSELCRHH--PELAVELVPLTSRGDKILDVPLAKVGGKG 72 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E+ +I+GE D AVHS KD+P + +GL ++ RED RD +S+ +L + Sbjct: 73 LFVKELEQAIIAGEADIAVHSMKDVPMEFPQGLGLAVICEREDPRDALVSNKYSNLDAIP 132 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR++ LL R D+ V RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 133 AGAVIGTSSLRRQSQLLAMRPDLEVTFLRGNVNTRLAKLDAGEYDAIILASAGLKRLQMV 192 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E + E P+ GQGA+ IE ++ + L++ ++H T +V ERA +L+G Sbjct: 193 DRIAEFIAPEVMLPAGGQGAVGIECRTDDQETLALLQPLHHGVTEQAVLAERAMNRKLEG 252 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCDAINIG 289 C+ I GFA + + L+ G+V DG ++ +V G+ DA +G Sbjct: 253 GCQVPIGGFAIHQDNQLWVRGLVADPDGSEVLYDQVI--GDPADAETLG 299 >gi|300115116|ref|YP_003761691.1| porphobilinogen deaminase [Nitrosococcus watsonii C-113] gi|299541053|gb|ADJ29370.1| porphobilinogen deaminase [Nitrosococcus watsonii C-113] Length = 314 Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 113/268 (42%), Positives = 156/268 (58%), Gaps = 2/268 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR S LAL A ++L H P ++ ++ +ST+GD+I + L +IGGKG Sbjct: 8 KTCLRIATRKSLLALWQAEYVANTLR--HHYPDLSVELVRMSTQGDKILDTPLAKIGGKG 65 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E+ L SGE D AVHS KD+P L + L I+ R D RD F+S+ Q L L Sbjct: 66 LFIKELEQGLFSGEADIAVHSMKDVPVDLPENLHIAVICQRGDPRDAFVSNHWQDLDSLP 125 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR++ + R D V+D RG + TRL KL+NN+ I+LA AG+KRL+ Sbjct: 126 EGARLGTSSLRRQSQVRERRPDFQVLDLRGNVNTRLAKLDNNEFDGIILATAGLKRLELT 185 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I+E L E P+ GQGAI IE + +EL+KV+ H T ++ ERA A L G Sbjct: 186 HRIRESLAPEVSLPAIGQGAIGIECRKGDTATEELIKVLEHPPTRITLQAERALNARLAG 245 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270 C+ IAG+A + L +V DG Sbjct: 246 GCQVPIAGYAELEDERLRLRALVGQPDG 273 >gi|108761567|ref|YP_630875.1| porphobilinogen deaminase [Myxococcus xanthus DK 1622] gi|123374611|sp|Q1D8Z8|HEM3_MYXXD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|108465447|gb|ABF90632.1| porphobilinogen deaminase [Myxococcus xanthus DK 1622] Length = 314 Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 104/265 (39%), Positives = 151/265 (56%), Gaps = 2/265 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L H P + ++ ++T+GDR + L+ +GGKGLF Sbjct: 5 VRIATRQSPLALWQARHVGALLTSRH--PGLEVTLVEMTTEGDRFLSAPLSAVGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G D AVHS KDM + +GL ++A RED RDVF +L L + Sbjct: 63 KEIEQALLDGRADIAVHSLKDMTSVFPEGLILAAVPEREDPRDVFCGLGGLTLDTLPQGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR +L R D+ ++ RG ++TRL + LLAYAG+KRL E VI Sbjct: 123 RVGTSSLRRSCILRSRRPDVDIVSVRGNVQTRLARTREQGLAGALLAYAGLKRLGLEDVI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++L E P+ GQG + I+ ++ + + L+ + H T +V ERA LA+L+G C Sbjct: 183 TQVLPPEVSLPAVGQGVLAIQCRTDDARVRALLVPLEHATTRIAVTAERALLAKLEGGCT 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270 +AG+A G T++ G+V DG Sbjct: 243 VPLAGYATVSGDTVFLRGLVGRPDG 267 >gi|78044433|ref|YP_360051.1| porphobilinogen deaminase [Carboxydothermus hydrogenoformans Z-2901] gi|123756773|sp|Q3ACT3|HEM3_CARHZ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|77996548|gb|ABB15447.1| porphobilinogen deaminase [Carboxydothermus hydrogenoformans Z-2901] Length = 311 Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 114/294 (38%), Positives = 167/294 (56%), Gaps = 2/294 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK +G+R S LAL L +H P N I+ + TKGD+I + L +IG KG Sbjct: 2 KKEVIVGSRDSALALWQTNWVVERLSKIH--PEINFKIVTMKTKGDKILDVALAKIGDKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E L++ ID AVHS KD+PT L +GL+I A+ RE DVFIS +L Sbjct: 60 LFTKELEHALLNKTIDMAVHSMKDLPTVLPEGLKIGAFCEREYPGDVFISPKGFKFLELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IGTSSLRR A +L R D+ I RG + TR K+ I+LAYAG+KRL E Sbjct: 120 QGARIGTSSLRRIAQILAVRPDLQAIPLRGNLPTRFRKMEEMDLDGIILAYAGVKRLGYE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E+L+ + P+ GQG+I +E ++ +EL+K I+H T ++ ERAFL L+G Sbjct: 180 DKITEMLSFDLCLPAVGQGSIGVEIRADDTFIEELLKPIDHFATNRAIRAERAFLKRLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ I ++ K + L+ G+V + DGK+ + + G+ + +G A+ + Sbjct: 240 GCQIPIGAYSEVKENRLHLKGVVASLDGKLVIKGEKEGSIEEPEKVGISLAEEL 293 >gi|59727198|gb|AAW92125.1| hydroxymethylbilane synthase [Enterobacter asburiae] Length = 313 Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 158/291 (54%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L H + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKQRLEACHS--GLRVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 64 KELELALLENRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYDSLDALPKGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL E I Sbjct: 124 VVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH++T V ERA L+G C+ Sbjct: 184 RVALPPELSLPAVGQGAVGIECRLDDARTRELLAPLNHDETAIRVKAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A L+ +V A DG R G DA +G A+ + Sbjct: 244 VPIGSYAELTEGELWLRALVGAPDGSQMVRGERRGKAQDAEQLGVSLAEEL 294 >gi|283787518|ref|YP_003367383.1| porphobilinogen deaminase [Citrobacter rodentium ICC168] gi|282950972|emb|CBG90649.1| porphobilinogen deaminase [Citrobacter rodentium ICC168] Length = 313 Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 160/291 (54%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDALMANH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + GL + RED RD F+S+ SL L S Sbjct: 64 KELEVALLEKRADIAVHSMKDVPVEFPAGLGLVTICEREDPRDAFVSNNYPSLDALPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + Q L+ +N E T V ERA L+G C+ Sbjct: 184 RAALPPEVSLPAVGQGAVGIECRLDDRRTQALLAPLNDEITALRVKAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A L+ +V A DG + R G+ A +G A+ + Sbjct: 244 VPIGSYAEMIDGELWLRALVGAPDGSLMVRGERRGSPEQAEQMGISLAEEL 294 >gi|330993440|ref|ZP_08317375.1| Porphobilinogen deaminase [Gluconacetobacter sp. SXCC-1] gi|329759470|gb|EGG75979.1| Porphobilinogen deaminase [Gluconacetobacter sp. SXCC-1] Length = 360 Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 120/321 (37%), Positives = 168/321 (52%), Gaps = 25/321 (7%) Query: 5 PFRIGTRCSPLALAH--AFETRSS-----LMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57 P ++GTR SPLAL AF T + L D+ H I ST GD++ NR L E Sbjct: 41 PLKVGTRASPLALVQTRAFLTVLTRFCPVLRDMGAFQEHQI-----STTGDQVQNRKLAE 95 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI------ 111 IGGKGLF +EI + L+ G ID AVHS KD+ T L GL ++ L RED RDV I Sbjct: 96 IGGKGLFAKEIHEALLDGRIDFAVHSLKDLETTLPPGLVLACTLKREDARDVLILGPGCG 155 Query: 112 -SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAIL 170 A L +++G +S+RR+A +L R D+ RG ++TRL+KL + A L Sbjct: 156 EPDPADPYSVLPQGALVGCASVRRQAQMLHVRPDLKFGLLRGNVQTRLDKLAARQCDATL 215 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 LAYAG++RL E IL+ P+ GQG + + ++ + +EL+ I + Sbjct: 216 LAYAGLRRLGMEDRADVILDPTIMVPAAGQGIVGVTVRESDVELRELLSAIEDYEARAVA 275 Query: 231 NCERAFLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284 ERA LAELDGSC++ I G+A L+ G+V DG + S +G D Sbjct: 276 TAERALLAELDGSCRTPIGGYARLIPVVAGGAPELHLTGLVAREDGSFLLKRSISGAPAD 335 Query: 285 AINIGRDAAQYIRFISNKNVF 305 A +GRD + +R S ++F Sbjct: 336 AARLGRDLGRSLRADSPADIF 356 >gi|226951768|ref|ZP_03822232.1| porphobilinogen deaminase [Acinetobacter sp. ATCC 27244] gi|226837483|gb|EEH69866.1| porphobilinogen deaminase [Acinetobacter sp. ATCC 27244] Length = 305 Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 114/291 (39%), Positives = 162/291 (55%), Gaps = 2/291 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A RS L ++ P + ++ T+GD+I + L +IGGKGL Sbjct: 2 KTLKIATRQSPLALWQAEHIRSRLNTLY--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L GL ++ RED D F+S+ +DL Sbjct: 60 FVKELEAALLDGRADLAVHSMKDVPMHLPDGLTLAVICEREDPLDAFVSNQYARFEDLPQ 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK +L+ R D+ +ID RG + TRL+KL++ AI+LA AG+KRL Sbjct: 120 GAKVGTSSLRRKCQILQQRPDLEIIDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLAD 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L P+ GQGA+ +E ++ K L++ + HE+T V ERA A L+G Sbjct: 180 RIRHCLAPVLSLPAVGQGALGLECRADDEKLLALIQPLQHEETSICVRAERALNAYLEGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 C+ IAG+A L G V + DGK + G+ A +G AQ Sbjct: 240 CQVPIAGYATIVNHQLQIEGRVGSVDGKTLLKKQLIGSTDQAEQLGEQLAQ 290 >gi|288550563|ref|ZP_06391088.1| hydroxymethylbilane synthase [Enterobacter cancerogenus ATCC 35316] gi|288314627|gb|EFC53565.1| hydroxymethylbilane synthase [Enterobacter cancerogenus ATCC 35316] Length = 318 Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 110/291 (37%), Positives = 159/291 (54%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L H + ++P+ T+GD I + L ++GGKGLF Sbjct: 11 LRIATRQSPLALWQAHYVKQRLEACHS--GLRVELVPMVTRGDVILDTPLAKVGGKGLFV 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + R+D RD F+S+ SL + + S Sbjct: 69 KELELALLENRADIAVHSMKDVPVEFPQGLGLVTICERDDPRDAFVSNHYDSLDAMPVGS 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ L R D+ + RG + TRL KL+N + AI+LA AG+KRL E I Sbjct: 129 VVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLGKLDNGEYDAIILAVAGLKRLDLESRI 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + + L+ +NH+DT V ERA L+G C+ Sbjct: 189 RVALPPEFSLPAVGQGAVGIECRLDDDRTRALLAPLNHDDTAIRVKAERAMNTRLEGGCQ 248 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A L+ +V A DG R G DA +G A+ + Sbjct: 249 VPIGSYAELSNGELWLRALVGAPDGSQMVRGERRGKPQDAEALGVSLAEEL 299 >gi|155967344|gb|ABU41508.1| HemC [Heliophilum fasciatum] Length = 315 Score = 191 bits (486), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 104/287 (36%), Positives = 162/287 (56%), Gaps = 3/287 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P IGTR S LAL L + P I + TKGD+I + L +IG KGL Sbjct: 6 RPIVIGTRDSALALWQTHWVLEQLQ--ARFPEQRFEIKAIKTKGDKILDVALAKIGDKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E ++ GE+D AVHS KD+PT+L +GL + A RED RDV I TA++L +L Sbjct: 64 FTKELEVAMLEGEVDMAVHSLKDLPTQLPEGLTVGAMCIREDYRDVLIGRTARTLAELKP 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GT+SLRRK+ + + R D+ ++D RG ++TR+ K+ I+LA AG+ RL Sbjct: 124 GARVGTASLRRKSQIWKVRPDLELLDIRGNLQTRMRKMEEQDLDGIILAAAGVLRLGWAD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + ++ + P+ GQG++ IE + +V +NH+DT D + ERA + L+G Sbjct: 184 KITQYIDEDVCLPAVGQGSVGIEIRDGDEAIARVVGALNHKDTADCITAERALMRTLEGG 243 Query: 244 CKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 C+ I + +L +G+V + DG+ G+R +A ++G Sbjct: 244 CQVPIGALGKLGEDDSLTLHGVVASLDGREICRDQVTGHRSEAADLG 290 >gi|327469193|gb|EGF14665.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK330] Length = 306 Score = 191 bits (486), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 114/308 (37%), Positives = 169/308 (54%), Gaps = 12/308 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q+L DL Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KR L Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + + L P+ QGA+ +E + + +L+ + E T V ERA LA+ Sbjct: 180 DQSHLHIQPLETSLCLPAISQGALAVECREEDKELLQLLATVQDEKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA FA KG ++ DG+ VS G + A Q +R + Sbjct: 240 MNADCTFPIAAFAQKKGQDYQLEAMLAKEDGQCVF-VSLKGQDGQEL-----AEQAVRQL 293 Query: 300 SNKNVFNF 307 ++K Sbjct: 294 ADKGAVGM 301 >gi|148262442|ref|YP_001229148.1| porphobilinogen deaminase [Geobacter uraniireducens Rf4] gi|189028092|sp|A5GCW2|HEM3_GEOUR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|146395942|gb|ABQ24575.1| porphobilinogen deaminase [Geobacter uraniireducens Rf4] Length = 318 Score = 191 bits (486), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 112/290 (38%), Positives = 162/290 (55%), Gaps = 5/290 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A +S L + P + ++ + T GD+I + L ++GG Sbjct: 1 MALKTLRIGTRASQLALWQANWVKSELE--KRYPGLEVSLLKIKTIGDKILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ G+ID AVHS KD+PT+ +GL + RED RD IS + D Sbjct: 59 KGLFVKEIEEAMLRGDIDIAVHSMKDVPTEFPEGLGLHCITEREDPRDAVISRGIK-FAD 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A LL+ R D+ ++ RG +ETR+NKL A++LA AG+KRL Sbjct: 118 LPKGAKIGTSALRRQAQLLKIRPDMEMVIIRGNVETRINKLEAENLDAVILAAAGLKRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + E L + P+ GQGA+ IE ++N + + + NH T +V ERA L Sbjct: 178 FTDKVAEYLPTDLSIPAIGQGALGIECRLDNEEVKSAIDFFNHPATAYAVRAERALLWRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCDAINI 288 +G C+ IA F +G L G + + DGK + VS C+ + I Sbjct: 238 EGGCQVPIAAFGEVEGDQLKLTGFIASVDGKTSVKGSVSGPAEECEKLGI 287 >gi|156742007|ref|YP_001432136.1| porphobilinogen deaminase [Roseiflexus castenholzii DSM 13941] gi|189028097|sp|A7NKU8|HEM3_ROSCS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|156233335|gb|ABU58118.1| porphobilinogen deaminase [Roseiflexus castenholzii DSM 13941] Length = 303 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 104/294 (35%), Positives = 161/294 (54%), Gaps = 3/294 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + IGTR S LAL R +L H P + + ++T+GD I +R L IG KG Sbjct: 2 RNSLTIGTRASKLALVQTHMIRDALQAAH--PGLTVAVERITTRGDIILDRPLNAIGDKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF EIE+ + +G +D AVHSAKD+P+ L + ++ R D RD ++ +L L Sbjct: 60 LFVVEIEEAMRAGRVDLAVHSAKDLPSTLPPDMTLAVCPRRADPRDALVAQPGMTLASLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR L R D++++D RG ++TRL KL + AI+LA AG+KRL E Sbjct: 120 HGARVGTSSLRRACQLRALRPDLTLLDLRGNVDTRLRKLREGQYDAIVLAAAGLKRLGLE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +VI E+L + P+ GQG I +E + + L+ ++ ++ ERAFLA + G Sbjct: 180 EVITELLEPDVLIPAVGQGIIGVEARAGDDEVLRLLAPLDDPAARAAITAERAFLARIGG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ + A +G L YG++ A DG++ + R+G+ D +G A+ + Sbjct: 240 GCRVPVGALALLEGDELLLYGMIGALDGRMVRGM-RSGSASDPAGLGSALAEEL 292 >gi|239995985|ref|ZP_04716509.1| porphobilinogen deaminase [Alteromonas macleodii ATCC 27126] Length = 312 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 109/293 (37%), Positives = 167/293 (56%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RI TR S LAL A ++ L++ + P + ++P+ST+GD+I + L +IGGKGL Sbjct: 8 RTVRIATRKSALALWQAEYVKAKLLEHY--PSMTVELVPMSTQGDKILDTPLAKIGGKGL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++ G D AVHS KD+P + +G + A RE+ D F+S+ SL L Sbjct: 66 FIKELEIAMLEGRADIAVHSMKDVPVEFPEGFGLHAICERENPFDAFVSNNHDSLDALPQ 125 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR+ + ++R D+ + D RG + TRL KL+ + AI+LA AG+ RL+ E Sbjct: 126 GAVVGTSSLRRQCQIRKYRPDLIIKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLEMES 185 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L + P+ GQGA+ IE ++ + +L++ +NH DT V ERA L+G Sbjct: 186 RIRMPLPADISLPAVGQGAVGIECRNDDEELIKLLQALNHTDTNTRVTAERAMNERLEGG 245 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ I FA G L G+V DG S +R A +IG + A+ + Sbjct: 246 CQVPIGSFATLDGDVLTLTGMVGKPDGSELLFASATASREKAADIGVEVAESL 298 >gi|325696921|gb|EGD38808.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK160] Length = 306 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 113/308 (36%), Positives = 169/308 (54%), Gaps = 12/308 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q L DL Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQKLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KR L Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ + L P+ QGA+ +E + + ++L+ + + T V ERA LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDDKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA FA KG ++ DG+ VS G + A Q +R + Sbjct: 240 MNADCTFPIAAFAQKKGQAYQLEAMLAKEDGQCVF-VSLQGQDGQEL-----AEQAVRQL 293 Query: 300 SNKNVFNF 307 ++K Sbjct: 294 ADKGAVGM 301 >gi|292493894|ref|YP_003529333.1| porphobilinogen deaminase [Nitrosococcus halophilus Nc4] gi|291582489|gb|ADE16946.1| porphobilinogen deaminase [Nitrosococcus halophilus Nc4] Length = 310 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 112/268 (41%), Positives = 154/268 (57%), Gaps = 2/268 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR S LAL A +L H P ++ ++ +ST+GD+I + L ++GGKG Sbjct: 4 KTCLRIATRKSLLALWQAEYVADTLR--HHHPGLSVELVRMSTQGDKILDTPLAKVGGKG 61 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E+ L+SGE D AVHS KD+P L + L IS RED RD F+S+ Q L L Sbjct: 62 LFVKELEQGLLSGEADIAVHSMKDVPVVLPEDLHISVICEREDPRDAFVSNHWQQLDSLP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR++ + R D V+D RG + TRL KL+NN+ I+LA +G+KRL Sbjct: 122 EGARVGTSSLRRQSQVRERRPDFHVLDLRGNVNTRLAKLDNNEFDGIVLAASGLKRLGLT 181 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E+L E P+ GQGAI IE + +EL+KV+ H T ++ ERA L G Sbjct: 182 DRITELLAPEVSLPAIGQGAIGIECRKGDTATEELLKVLEHTPTRTTIRAERALNERLAG 241 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270 C+ IA +A G L +V DG Sbjct: 242 GCQVPIAAYAELDGERLRLRALVGQPDG 269 >gi|170719443|ref|YP_001747131.1| porphobilinogen deaminase [Pseudomonas putida W619] gi|229836111|sp|B1J1V2|HEM3_PSEPW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|169757446|gb|ACA70762.1| porphobilinogen deaminase [Pseudomonas putida W619] Length = 313 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 110/294 (37%), Positives = 161/294 (54%), Gaps = 2/294 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNRFSSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L Sbjct: 179 FEERITASISVDDSLPAGGQGAVGIECRSADSEIHALLAPLHHTDTADRVVAERALNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 +G C+ IA +A +G L+ G+V G R A +G A+ Sbjct: 239 NGGCQVPIACYAVLEGEQLWLRGLVGQPSGGTLLMADARAPRASAETLGVQVAE 292 >gi|197116806|ref|YP_002137233.1| porphobilinogen deaminase [Geobacter bemidjiensis Bem] gi|226706286|sp|B5EBG8|HEM3_GEOBB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|197086166|gb|ACH37437.1| hydroxymethylbilane synthase [Geobacter bemidjiensis Bem] Length = 318 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 107/272 (39%), Positives = 156/272 (57%), Gaps = 3/272 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A +S L + P + + + T GD+I + L ++GG Sbjct: 1 MALKELRIGTRASQLALWQANWVKSELE--KRYPDMTVTLTKIKTIGDKILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD IS+ + D Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISNGVK-FAD 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A LL+ R D+ ++ RG ++TR++KL A++LA AG+ RL Sbjct: 118 LPQGARIGTSALRRQAQLLKVRPDLEMVIIRGNVQTRMDKLKTEGLDAVILAAAGLNRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E+L + P+ GQGA+ IE +++N ++ + N DT +V ERA L Sbjct: 178 FADQITEMLPTDLSLPAIGQGALGIECNLSNQDVKDAISFFNSPDTSRAVRAERALLWRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272 +G C+ IA F G L G + + DGK+ Sbjct: 238 EGGCQVPIAAFGEVTGDQLKLTGFIASVDGKV 269 >gi|303230554|ref|ZP_07317308.1| hydroxymethylbilane synthase [Veillonella atypica ACS-049-V-Sch6] gi|302514795|gb|EFL56783.1| hydroxymethylbilane synthase [Veillonella atypica ACS-049-V-Sch6] Length = 312 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 107/301 (35%), Positives = 170/301 (56%), Gaps = 2/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL + +S L ++ P + ++ +TKGDRI N+ L E+GGKGLFT Sbjct: 5 IRIGTRKSALALWQSEYVKSELQRLY--PGVTVELVHFNTKGDRILNKPLAEVGGKGLFT 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E+E + +G+ID AVHS KDMPT+L GL + A RE D +S ++L L + Sbjct: 63 AELEAAMHAGDIDIAVHSLKDMPTELPDGLTLGAISKREVPFDALVSPKYKTLDQLPEGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSSLRR+A LL R D+ + RG ++TRL K+ ++LA AG+KRL + I Sbjct: 123 RIGTSSLRRQAQLLHRRPDLQIEVIRGNVQTRLGKIETEGLDGVVLAQAGLKRLGLDDRI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ ++ P+ GQGA+ IE ++ + E++ I+ E T +V ER+FL +L+G C+ Sbjct: 183 TQVFTADEMIPAVGQGALAIECRSDDTEMLEILSKIDDEPTRLAVEGERSFLNQLNGGCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + + + L ++ + DGK +E +G + +G++ A+ + K++ Sbjct: 243 VPMGVYGTVEKGQLNLKALIASLDGKTVYEGELSGPAKKGVMLGKNLAKALYEEGGKHIV 302 Query: 306 N 306 Sbjct: 303 E 303 >gi|119475318|ref|ZP_01615671.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2143] gi|119451521|gb|EAW32754.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2143] Length = 313 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 108/274 (39%), Positives = 164/274 (59%), Gaps = 5/274 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A ++ L H P ++ ++ ++T+GD++ + L +IGG Sbjct: 1 MPSNLVRIATRESPLALWQAEFIKAGLQAAH--PGLDVELLGMTTRGDKMLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL++S RED RD F+S+ +++ + Sbjct: 59 KGLFVKELETAMLEGRADIAVHSMKDVPMEFPEGLELSIICEREDPRDAFVSNHFKTVNE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L S +GTSSLRR+ L R D+++ID RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPLGSRVGTSSLRRQCQLRALRPDLNIIDLRGNVNTRLRKLDEGQYDAIILASAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I + + ++ P+ GQGA+ +E ++ + Q L+ +NH T V+ ERA L Sbjct: 179 MEQRIADPIAVDSSLPAGGQGAVGVEARSDDHRIQALLAPLNHRSTALRVSAERAMNLRL 238 Query: 241 DGSCKSAIAGFAYC--KGS-TLYFYGIVLASDGK 271 G C+ IA FA +GS L G+V + DGK Sbjct: 239 QGGCQVPIACFAELDIEGSGQLRLRGLVGSPDGK 272 >gi|53802806|ref|YP_115447.1| porphobilinogen deaminase [Methylococcus capsulatus str. Bath] gi|53756567|gb|AAU90858.1| porphobilinogen deaminase [Methylococcus capsulatus str. Bath] Length = 351 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A S L H P + ++ ++T+GD++ + L ++GGKGLF Sbjct: 47 LRIATRKSPLALWQAEYVASRLRAAH--PDLRVELVGMTTRGDKLLDAPLAKVGGKGLFV 104 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ G D AVHS KD+P + +GL ++A L RED RD +SH +S +L + Sbjct: 105 KELEQGLLEGRADIAVHSMKDVPVEFPEGLHLAAILEREDPRDALVSHRYRSFAELPADA 164 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSSLRR+ + S+ D RG + TRL KL+ + AI+LA AG+KRL ++ I Sbjct: 165 RIGTSSLRRQCQIKCRLPGCSLYDLRGNVNTRLAKLDAGEFDAIVLASAGLKRLGFQERI 224 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L E P+ GQGAI +E + + L+ ++H T V ERA LDG C+ Sbjct: 225 AETLTPEQCLPAIGQGAIGVECRSTDTRTNALLVPLHHPPTAWCVLAERAMNRRLDGGCQ 284 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 IAGFA +G TL G+V DG G+ +G+ A+++ Sbjct: 285 VPIAGFAQLEGDTLSLRGLVGNPDGSGIIRAEAVGHPSTFEALGKRVAEHL 335 >gi|296105312|ref|YP_003615458.1| hydroxymethylbilane synthase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059771|gb|ADF64509.1| hydroxymethylbilane synthase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 313 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 158/291 (54%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L H + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKQRLEACHS--GLRVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 64 KELELALLENRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQFDSLDALPKGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL E I Sbjct: 124 VVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH++T V ERA L+G C+ Sbjct: 184 RVALPPELSLPAVGQGAVGIECRLDDRRTRELLAPLNHDETAIRVKAERAMNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A L+ +V A DG R G DA +G A+ + Sbjct: 244 VPIGSYAELINGELWLRALVGAPDGSQMVRGERRGKPQDAEQLGISLAEEL 294 >gi|330827978|ref|YP_004390930.1| Porphobilinogen deaminase [Aeromonas veronii B565] gi|328803114|gb|AEB48313.1| Porphobilinogen deaminase [Aeromonas veronii B565] Length = 330 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 106/296 (35%), Positives = 163/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +I TR SPLAL A + L +H P + ++P+ST+GD+I + L ++GG Sbjct: 22 MAARTLKIATRKSPLALWQANFVKDRLEALH--PQLQVELVPMSTQGDKILDTPLAKVGG 79 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ +++ + Sbjct: 80 KGLFVKELETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFKAIAE 139 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 140 LPQGAVVGTSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLE 199 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I + E P+ GQGA+ IE +++ + L+ + H +T V ERA L Sbjct: 200 MAHRITAFIEPEQSLPANGQGAVGIECRLDDVELHALLAPLEHTETRARVLTERAMNRAL 259 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 G C+ I +A +G ++ G+V + DG G D +G AQ + Sbjct: 260 QGGCQVPIGAYALVEGEQIWLRGLVGSPDGTQVIRDEIRGPLADGEALGEQLAQRL 315 >gi|32033974|ref|ZP_00134230.1| COG0181: Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 314 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 111/294 (37%), Positives = 162/294 (55%), Gaps = 2/294 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR SPLAL A + L + P ++ ++ + TKGD I + L +IGGKG Sbjct: 7 KDTLRIATRQSPLALWQANFVKDELE--KRFPELSVELVTMVTKGDVILDTPLAKIGGKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L Sbjct: 65 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDELP 124 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 125 AGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMP 184 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ +++E P+ GQGA+ IET VN+ + + +NH T V ERA L G Sbjct: 185 ERIRSFISVEQSLPAAGQGAVGIETRVNDERVLNYLATLNHNPTACCVIAERAMNTRLQG 244 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ I GFA G+ + +V A DG S +R +A +G A+ + Sbjct: 245 GCQVPIGGFATLNGNEITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQL 298 >gi|294649011|ref|ZP_06726459.1| hydroxymethylbilane synthase [Acinetobacter haemolyticus ATCC 19194] gi|292825146|gb|EFF83901.1| hydroxymethylbilane synthase [Acinetobacter haemolyticus ATCC 19194] Length = 305 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 113/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A RS L ++ P + ++ T+GD+I + L +IGGKGL Sbjct: 2 KTLKIATRQSPLALWQAEHIRSRLNALY--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L GL ++ RED D F+S+ +DL Sbjct: 60 FVKELEAALLDGRADLAVHSMKDVPMHLPDGLTLAVICEREDPLDAFVSNQYARFEDLPQ 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK +L+ R D+ ++D RG + TRL+KL++ AI+LA AG+KRL Sbjct: 120 GAKVGTSSLRRKCQILQQRPDLEIVDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLAD 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L P+ GQGA+ +E ++ K L++ + HE+T V ERA A L+G Sbjct: 180 RIRHCLAPVLSLPAVGQGALGLECRADDEKLLALIQPLQHEETSICVRAERALNAYLEGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 C+ IAG+A L G V + DGK + G+ A +G AQ Sbjct: 240 CQVPIAGYATIVNHQLQIEGRVGSVDGKTLLKKQLIGSTDQAEQLGEQLAQ 290 >gi|262370151|ref|ZP_06063478.1| porphobilinogen deaminase [Acinetobacter johnsonii SH046] gi|262315190|gb|EEY96230.1| porphobilinogen deaminase [Acinetobacter johnsonii SH046] Length = 306 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 112/293 (38%), Positives = 166/293 (56%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L +H + ++ T+GD+I + L +IGGKGL Sbjct: 2 KTLKIATRQSPLALWQAEHIRARLEALHA--GLTVELVTFVTQGDKILDTPLAKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S++ S L Sbjct: 60 FVKELEAALLDGRADLAVHSMKDVPMALPEGLSLAVICEREDPLDAFVSNSYVSFDALPQ 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK +L+ R D+ +ID RG + TRL+KL+ + AI+LA AG+KRL + Sbjct: 120 GAKVGTSSLRRKCQILKQRPDLDIIDLRGNVGTRLSKLDAGQYDAIILASAGLKRLGLAE 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + E P+ GQGA+ +E N+ +L+ + H DT V ERAF A L+G Sbjct: 180 RICHTIRPELSLPAVGQGALGLECRANDQAVLDLIHPLLHIDTDTCVRAERAFNAYLEGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ IAG+A + + G V + DG+ + G+ +A ++G AQ + Sbjct: 240 CQVPIAGYATLADNRIQLEGRVGSVDGQTLLKAQVAGDAAEAEHLGVVLAQEL 292 >gi|126208484|ref|YP_001053709.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae L20] gi|126097276|gb|ABN74104.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 309 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 111/294 (37%), Positives = 162/294 (55%), Gaps = 2/294 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR SPLAL A + L + P ++ ++ + TKGD I + L +IGGKG Sbjct: 2 KDTLRIATRQSPLALWQANFVKDELE--KRFPELSVELVTMVTKGDVILDTPLAKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L Sbjct: 60 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 120 AGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMP 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ +++E P+ GQGA+ IET VN+ + + +NH T V ERA L G Sbjct: 180 ERIRSFISVEQSLPAAGQGAVGIETRVNDERVLNYLATLNHNPTACCVIAERAMNTRLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ I GFA G+ + +V A DG S +R +A +G A+ + Sbjct: 240 GCQVPIGGFATLNGNEITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQL 293 >gi|148284479|ref|YP_001248569.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Boryong] gi|167008815|sp|A5CDH4|HEM3_ORITB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|146739918|emb|CAM79909.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Boryong] Length = 298 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 109/291 (37%), Positives = 165/291 (56%), Gaps = 5/291 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+G+R S LAL A ++ + ++ + N +IIP+ T GD I N+ L +IGGKGLF Sbjct: 3 IRVGSRASRLALIQA---QAVVQKINDLLGLNAIIIPIKTTGDLIQNKNLYDIGGKGLFL 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ ID AVHS KD+P L GLQ++A L R D+ D+ +S A + DL L + Sbjct: 60 KEIEYALLNNTIDIAVHSLKDVPAYLPDGLQLAAVLERGDVGDMLVSKIANKITDLPLGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV- 184 ++GTSS+RR+ LL R D++++ FRG ++TR NK+ NN+ A +LA AG++RL + Sbjct: 120 IVGTSSVRRRIQLLMLRPDLNIVLFRGNVDTRWNKIINNEVDATVLAAAGLQRLNYDTSR 179 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + P+ GQGAI IE ++ L INH+ TW + ER +L L+ C Sbjct: 180 FCNIIPQSEMLPAIGQGAIAIEARKDDKLIMPLCAKINHQLTWQLIQVERGYLKTLNADC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLAS-DGKIFHEVSRNGNRCDAINIGRDAAQ 294 I G A G+ + +L + + F G +IG +AA+ Sbjct: 240 NVPIGGIASYIGNNSFEAKFMLGDYNMRYFFYSEVRGKLQHGYDIGVEAAK 290 >gi|94264595|ref|ZP_01288379.1| Porphobilinogen deaminase [delta proteobacterium MLMS-1] gi|93454949|gb|EAT05186.1| Porphobilinogen deaminase [delta proteobacterium MLMS-1] Length = 311 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 108/283 (38%), Positives = 161/283 (56%), Gaps = 2/283 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LALA A + + H P + ++ + TKGD+I + L ++GGKGLF Sbjct: 5 IRIGTRASMLALAQANWIKGRIEAQH--PQCRVELVKIITKGDKIVDVPLAKVGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ ++ GE+D AVHS KD+P +L +GL I RE+ D F+S+ Q+++ L + Sbjct: 63 KEIEEAMLRGEVDIAVHSMKDVPAELPQGLHIGIITQRENPFDAFVSNLYQNIEALPTGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRRK+ L R D+++ D RG ++TRL KL+ + I+LA AG+ RL Sbjct: 123 RVGTSSLRRKSQLAALRPDLTIEDLRGNLDTRLRKLDEGQYDGIILAAAGLNRLDLAHRA 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E P+ QGA+ IE + E++ ++H T +V ERA+L L+G C+ Sbjct: 183 TFYFQAEQMLPAVAQGAVGIELRRADADLLEMLSFMDHRATTLAVKAERAYLKRLEGGCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 +AGFA G L +V A DG +VS++G +A I Sbjct: 243 VPLAGFATLDGDRLQLDTLVAAIDGSRLLKVSKSGPAEEAEEI 285 >gi|148554852|ref|YP_001262434.1| porphobilinogen deaminase [Sphingomonas wittichii RW1] gi|148500042|gb|ABQ68296.1| porphobilinogen deaminase [Sphingomonas wittichii RW1] Length = 308 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 108/267 (40%), Positives = 151/267 (56%), Gaps = 3/267 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P R+GTR SPLAL A ++L H + I+ + T GDRI +R L E+GGK L Sbjct: 7 RPLRLGTRGSPLALTQARMVIAALRAAHGWDETAVEIVAIKTSGDRIQDRALAEVGGKAL 66 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +T+E++ L G ID AVHS KD+ T + I+A LPR D+RD I A SL L Sbjct: 67 WTKELDIALADGTIDFAVHSMKDVETIRPAAIVIAAMLPRADVRDRLIG--AASLAALPQ 124 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSS RR A + R R D+ ++ FRG ++TRL KL +A A LLA AG+ RL +++ Sbjct: 125 GARVGTSSPRRSAQVRRARPDVGIVLFRGNVDTRLGKLAAGEAEATLLAGAGLIRLGRDE 184 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + I IE+ P+P Q A+ IET + L+ I+ T SV+ ERA LA L Sbjct: 185 IGHPI-PIEEMLPAPAQAAVGIETLAERTDVRALLGAIDDAPTNASVSAERALLAALGAD 243 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG 270 C+S +A A G+ L ++ DG Sbjct: 244 CRSPVAALAVRSGAGLLLRAEIMTEDG 270 >gi|114797250|ref|YP_761901.1| porphobilinogen deaminase [Hyphomonas neptunium ATCC 15444] gi|123128354|sp|Q0BX92|HEM3_HYPNA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|114737424|gb|ABI75549.1| porphobilinogen deaminase [Hyphomonas neptunium ATCC 15444] Length = 321 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 115/309 (37%), Positives = 170/309 (55%), Gaps = 7/309 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K R+GTR SPLALA A + + ++ I+ +T GD++T L GGKGL Sbjct: 11 KRLRLGTRGSPLALAQAHQIADGIR-AASAGAYDCEIVAFTTTGDKLTTERLINSGGKGL 69 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT E++ L GE+D AVHS KD+P+ L G +A+ RED RD F+SH A+S++DL Sbjct: 70 FTRELDDALSRGELDLAVHSLKDVPSVLPPGQIFAAFPKREDPRDGFLSHGAKSIQDLPE 129 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GT+SLRR+A L R D+ V+ FRG + TR+ KL A A LA AG+ RL + Sbjct: 130 GATLGTASLRREAQALALRPDLKVVTFRGNVATRMRKLEEGLADATFLAMAGLTRLGLSE 189 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V I +ED P+ GQG I + T + + + E++ ++HE + + ERAFL +LDG Sbjct: 190 VATPI-PLEDMLPAAGQGIIGVVTRDDVDTELLEILGQLSHEPSRVAAIAERAFLEKLDG 248 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE----VSRNGNRCDAINIGRDAAQYIRF 298 SC++ IA + +G G VL+ G ++ + +GR AQ I F Sbjct: 249 SCRTPIAAHLFDRGDEWQLIGEVLSPGGTTRWRGDGVCRKDATDAQLVLLGRAVAQEIIF 308 Query: 299 ISNKNVFNF 307 + + + F Sbjct: 309 AAKEALPVF 317 >gi|262273217|ref|ZP_06051033.1| porphobilinogen deaminase [Grimontia hollisae CIP 101886] gi|262222795|gb|EEY74104.1| porphobilinogen deaminase [Grimontia hollisae CIP 101886] Length = 311 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 103/270 (38%), Positives = 156/270 (57%), Gaps = 2/270 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M P RI TR SPLAL A +++L H P + ++P+ TKGD I + L ++GG Sbjct: 1 MTSTPIRIATRQSPLALWQAEFVKAALEATH--PGLTVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P + +GL + RED RD F+S+ S+ + Sbjct: 59 KGLFVKELEQAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYTSISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+KRL Sbjct: 119 LPQGAIVGTSSLRRQCQLRAMRPDLVIKDLRGNVGTRLGKLDNGEYDAIILASAGLKRLN 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ + E+ P+ GQGA+ IE +++ + + L++ + +T V CERA L Sbjct: 179 LHDRIRNEIEPEEILPAVGQGAVGIECRLDDERVRALLEPLADANTTYRVLCERAMNNRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C+ I +A G ++ +V DG Sbjct: 239 MGGCQVPIGSYAEIHGDQIHLRALVGEPDG 268 >gi|254360510|ref|ZP_04976659.1| hydroxymethylbilane synthase [Mannheimia haemolytica PHL213] gi|261493197|ref|ZP_05989725.1| hydroxymethylbilane synthase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495982|ref|ZP_05992397.1| hydroxymethylbilane synthase [Mannheimia haemolytica serotype A2 str. OVINE] gi|153091050|gb|EDN73055.1| hydroxymethylbilane synthase [Mannheimia haemolytica PHL213] gi|261308358|gb|EEY09646.1| hydroxymethylbilane synthase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311145|gb|EEY12320.1| hydroxymethylbilane synthase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 311 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 111/287 (38%), Positives = 162/287 (56%), Gaps = 2/287 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR SPLAL A +S L + H P ++ ++ + TKGD I + L +IGGKG Sbjct: 2 KDILRIATRQSPLALWQANFVKSEL-EKH-FPQLSVELVTMVTKGDIILDTPLAKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ SL+DL Sbjct: 60 LFVKELELALLENRADIAVHSMKDVPMSFPEGLGLAVICEREDPRDAFVSNNYHSLEDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL + Sbjct: 120 KGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGLQ 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ +++E P+ GQGA+ IET N+ + + +NH T V ERA L G Sbjct: 180 ERIRSYISVEQSLPAAGQGAVGIETRANDERILNYIAKLNHSSTACCVMAERAMNTRLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 C+ I G+A +G L +V + DG S G++ +A +G Sbjct: 240 GCQVPIGGYATLEGDELTLNALVGSLDGSQIIRASAKGHKQEAEQLG 286 >gi|90581042|ref|ZP_01236842.1| porphobilinogen deaminase [Vibrio angustum S14] gi|90437738|gb|EAS62929.1| porphobilinogen deaminase [Vibrio angustum S14] Length = 310 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 102/270 (37%), Positives = 157/270 (58%), Gaps = 2/270 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +P RI TR SPLA+ A ++ L H P + ++P+ TKGD I + L ++GG Sbjct: 1 MSNQPIRIATRKSPLAMWQAEFVKAELEQAH--PGIIVELVPMITKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ ++ + Sbjct: 59 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNKYNNIDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ V D RG + TRL K++ + AI+LA AG+KRLK Sbjct: 119 LPQGAIVGTSSLRRQCQLRAQRPDLIVNDLRGNVNTRLRKMDEGQYDAIILACAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE +++ + ++L+ ++ + T V CERA L Sbjct: 179 MEDRIRSEIAPEVSLPAVGQGAVGIECRLDDTRVRQLLAALSDQATTTRVLCERAMNNYL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C+ I +A +G ++ +V DG Sbjct: 239 QGGCQVPIGSYAELEGDQIWLRALVGEPDG 268 >gi|161594062|ref|NP_899724.2| porphobilinogen deaminase [Chromobacterium violaceum ATCC 12472] gi|55976482|sp|Q7P207|HEM3_CHRVO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 309 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 112/290 (38%), Positives = 165/290 (56%), Gaps = 4/290 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 I +R S LA+ A ++ L ++ PH + I+ ++T+GD+I ++TL++IGGKGLF + Sbjct: 6 IASRESRLAMWQAEHIQARLQALY---PHLTVEILGMTTQGDQILDKTLSKIGGKGLFVK 62 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 E+E+ L+ G D AVHS KD+P L G ++A RED RD F+S+ Q L +L SV Sbjct: 63 ELEQALMDGRADLAVHSLKDVPMTLPDGFALAAVCEREDPRDAFVSNRYQHLSELPAGSV 122 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSSLRR+A L ++V RG ++TRL KL++ + AI+LA AG+KRL + I+ Sbjct: 123 VGTSSLRREAQLRARFPQLAVKPLRGNVQTRLKKLDDGEFDAIILAAAGLKRLGLAERIQ 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L + P+ GQGA+ IE + L+ +NH DT ERA EL GSC+ Sbjct: 183 GELAPSESLPAAGQGALGIEIRADRADLSALLAPLNHPDTRACTAAERALAKELGGSCQV 242 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + FA TL G+V DG + S +G A +GR A+ + Sbjct: 243 PLGAFATLADGTLTLGGLVAHPDGSVVLTASASGPADYADALGRAVAKKL 292 >gi|169634609|ref|YP_001708345.1| porphobilinogen deaminase [Acinetobacter baumannii SDF] gi|169153401|emb|CAP02532.1| porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Acinetobacter baumannii] Length = 314 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 107/293 (36%), Positives = 167/293 (56%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A + L ++H P + ++ T+GD+I + L +IGGKGL Sbjct: 11 KTLKIATRQSPLALWQAEHICARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 69 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL + Sbjct: 129 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G Sbjct: 189 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDICVRAERAFNAYLEGG 248 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ IAG+A + ++ G V + DG+ +A +G + A+ + Sbjct: 249 CQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNL 301 >gi|61213332|sp|Q602K3|HEM3_METCA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 322 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 162/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A S L H P + ++ ++T+GD++ + L ++GGKGLF Sbjct: 18 LRIATRKSPLALWQAEYVASRLRAAH--PDLRVELVGMTTRGDKLLDAPLAKVGGKGLFV 75 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ G D AVHS KD+P + +GL ++A L RED RD +SH +S +L + Sbjct: 76 KELEQGLLEGRADIAVHSMKDVPVEFPEGLHLAAILEREDPRDALVSHRYRSFAELPADA 135 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSSLRR+ + S+ D RG + TRL KL+ + AI+LA AG+KRL ++ I Sbjct: 136 RIGTSSLRRQCQIKCRLPGCSLYDLRGNVNTRLAKLDAGEFDAIVLASAGLKRLGFQERI 195 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L E P+ GQGAI +E + + L+ ++H T V ERA LDG C+ Sbjct: 196 AETLTPEQCLPAIGQGAIGVECRSTDTRTNALLVPLHHPPTAWCVLAERAMNRRLDGGCQ 255 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 IAGFA +G TL G+V DG G+ +G+ A+++ Sbjct: 256 VPIAGFAQLEGDTLSLRGLVGNPDGSGIIRAEAVGHPSTFEALGKRVAEHL 306 >gi|332363838|gb|EGJ41617.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK355] Length = 306 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 114/309 (36%), Positives = 170/309 (55%), Gaps = 14/309 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I + Q+L DL Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQSGQTLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KR L Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ + L P+ QGA+ +E + + + L+ + E T V ERA LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK-IFHEVSRNGNRCDAINIGRDAAQYIRF 298 ++ C IA FA G ++ DG+ IF VS G + A Q +R Sbjct: 240 MNADCTFPIAAFAQKNGQNYQLEAMLAKEDGQCIF--VSLQGQDGQEL-----AEQAVRQ 292 Query: 299 ISNKNVFNF 307 +++K Sbjct: 293 LADKGAVGM 301 >gi|13676388|dbj|BAB41183.1| porphobilinogen deaminase [Amaranthus tricolor] Length = 198 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 99/197 (50%), Positives = 133/197 (67%), Gaps = 1/197 (0%) Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116 +IGGKGLFT+EI++ L++ EID AVHS KD+PT L + + L RED+RD FIS TA Sbjct: 2 DIGGKGLFTKEIDEALLNNEIDIAVHSMKDVPTYLPDKIILPCNLEREDVRDAFISTTAS 61 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAG 175 SL DL SV+GT+SLRRK+ LL + V+D FRG ++TRL KLN A LLA AG Sbjct: 62 SLADLPAGSVVGTASLRRKSQLLHRYPSLEVLDNFRGNVQTRLRKLNEGLVQATLLALAG 121 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 +KRL + + +L+I+D P+ QGAI I ++ K + ++NHE+T +V CERA Sbjct: 122 LKRLNMTENVSSVLSIDDMLPAVAQGAIGIACLQDDDKMANYLALLNHEETQLAVACERA 181 Query: 236 FLAELDGSCKSAIAGFA 252 FL LDGSC++ IAG+A Sbjct: 182 FLETLDGSCRTPIAGYA 198 >gi|325576792|ref|ZP_08147407.1| hydroxymethylbilane synthase [Haemophilus parainfluenzae ATCC 33392] gi|325160998|gb|EGC73116.1| hydroxymethylbilane synthase [Haemophilus parainfluenzae ATCC 33392] Length = 310 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 104/267 (38%), Positives = 155/267 (58%), Gaps = 2/267 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A + L H P ++ ++P+ TKGD I + L +IGGKGL Sbjct: 5 KTLKIATRQSPLALWQANFVKDQLEKFH--PTLSVELVPMVTKGDVILDSPLAKIGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ D AVHS KD+P + +GL +S RED RD F+S+T +SL DL Sbjct: 63 FVKELENALLEKRADIAVHSMKDVPMEFPEGLGLSVICKREDPRDAFVSNTYRSLDDLPQ 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+ L + R D+ + RG + TRL+KL+N + AI+LA AG+ RL + Sbjct: 123 GAIVGTSSLRRQCQLKQLRPDLDIRSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGLAE 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + +E P+ GQGA+ IE V++ + + L+ ++ T V ERA L G Sbjct: 183 RIASFIEVEQSLPAAGQGAVGIECRVDDEEVKALLAPLSDATTTTCVLAERAMNTRLQGG 242 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG 270 C+ I G+A + ++ +V +DG Sbjct: 243 CQVPIGGYAIEQNGEIFLRALVGETDG 269 >gi|330812535|ref|YP_004356997.1| porphobilinogen deaminase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380643|gb|AEA71993.1| porphobilinogen deaminase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 313 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 112/294 (38%), Positives = 164/294 (55%), Gaps = 2/294 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MCPREIRIATRKSALALWQAEYVKARLEAAH--PGLIVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTFSSLEA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + L+ ++HEDT V ERA L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSADSDIHALLAPLHHEDTATRVFAERALNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 +G C+ IA +A +G ++ G+V +G R DA +G A+ Sbjct: 239 NGGCQVPIACYAVLEGEQVWLRGLVGDPNGGRLLSAEARAPRHDAEALGVRVAE 292 >gi|325693629|gb|EGD35548.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK150] Length = 306 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 113/308 (36%), Positives = 169/308 (54%), Gaps = 12/308 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q+L DL Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KR L Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ + L P+ QGA+ +E + + ++L+ + E T V ERA LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDEKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA FA G ++ DG+ VS G + A Q +R + Sbjct: 240 MNADCTFPIAAFAQKNGQDYQLEAMLAKEDGQCVF-VSFQGQDGQEL-----AEQAVRQL 293 Query: 300 SNKNVFNF 307 ++K Sbjct: 294 ADKGAVGM 301 >gi|157829875|pdb|1AH5|A Chain A, Reduced Form Selenomethionine-Labelled Hydroxymethylbilane Synthase Determined By Mad Length = 313 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 110/284 (38%), Positives = 155/284 (54%), Gaps = 2/284 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L H P + ++P T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLXASH--PGLVVELVPXVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L S Sbjct: 64 KELEVALLENRADIAVHSXKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL E I Sbjct: 124 IVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L+G C+ Sbjct: 184 RAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAXNTRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 I +A ++ +V A DG R G DA G Sbjct: 244 VPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQXG 287 >gi|324990199|gb|EGC22137.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK353] Length = 306 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 113/308 (36%), Positives = 169/308 (54%), Gaps = 12/308 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q+L DL Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KR L Sbjct: 120 KGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ + L P+ QGA+ +E + + + L+ + E T V ERA LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA FA G ++ DG+ VS G + A Q +R + Sbjct: 240 MNADCTFPIAAFAQKNGQNHQLEAMLAKEDGQCVF-VSLQGQDGQEL-----AEQAVRQL 293 Query: 300 SNKNVFNF 307 ++K Sbjct: 294 ADKGAVGM 301 >gi|315303323|ref|ZP_07873952.1| porphobilinogen deaminase [Listeria ivanovii FSL F6-596] gi|313628303|gb|EFR96807.1| porphobilinogen deaminase [Listeria ivanovii FSL F6-596] Length = 309 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 116/290 (40%), Positives = 166/290 (57%), Gaps = 9/290 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSGWVIARLKENY--PSIDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L G ID AVHS KD+P+ L +GL I A RE D F+ +T + KDL Sbjct: 60 LFVSEVEQALSDGLIDFAVHSMKDVPSSLKEGLTIGAIPKRESALDCFVFNTVATFKDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR A +LR R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 120 KGAVIGTSSLRRAAQILRKRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMG-- 177 Query: 183 KVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + L +ED P P+ GQGA+ IE ++ + +++ I+HE+T V ER FL Sbjct: 178 WLENTTLKLEDIPPELCLPAVGQGALAIECRESDQQICDMLASIHHEETGACVEAERIFL 237 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 +L+G C+ IAGFA T++F G+V SDG ++G + I Sbjct: 238 KKLNGGCEIPIAGFATKTDGTVHFKGLVGNSDGTTILSAEQSGKNPETIG 287 >gi|78224425|ref|YP_386172.1| porphobilinogen deaminase [Geobacter metallireducens GS-15] gi|123742774|sp|Q39QM7|HEM3_GEOMG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78195680|gb|ABB33447.1| Porphobilinogen deaminase [Geobacter metallireducens GS-15] Length = 318 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 109/290 (37%), Positives = 160/290 (55%), Gaps = 5/290 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A + L + P + ++ + T GD+I + L ++GG Sbjct: 1 MAPKQLRIGTRASQLALWQANWVKGELE--KRYPGMAVELVKIKTMGDKILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD IS + D Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISRGVK-FAD 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A +L+ R D+ ++ RG +ETR+ KL + A++LA AG+ RL Sbjct: 118 LPQGARIGTSALRRQAQILKVRPDLQMVVIRGNVETRIRKLTDENLDAVILAAAGLNRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + E L +E P+ GQGA+ IE +++ ++ + NH DT +V ERA L Sbjct: 178 FADQVSEYLPVELSLPAIGQGALGIECRLDDETIKDTIAFFNHPDTAHAVRAERALLWRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG--KIFHEVSRNGNRCDAINI 288 +G C+ IA G TL G V + DG + +S C+ + I Sbjct: 238 EGGCQVPIAAHGQVSGDTLTLTGFVASVDGTRSVKDTISGPVTECEKLGI 287 >gi|332363288|gb|EGJ41073.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK49] Length = 306 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 113/308 (36%), Positives = 169/308 (54%), Gaps = 12/308 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAITQTQQLVDQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q+L DL Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISRREDVRDCLIFRQAGQTLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KR L Sbjct: 120 KGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ + L P+ QGA+ +E + + + L+ + E T V ERA LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA FA G ++ DG+ VS G + A Q +R + Sbjct: 240 MNADCTFPIAAFAQKNGQDYQLEAMLAKEDGQCVF-VSLQGQDGQEL-----AEQAVRQL 293 Query: 300 SNKNVFNF 307 ++K Sbjct: 294 ADKGAVGM 301 >gi|496214|gb|AAA18907.1| porophorbilinogen deaminase [Pseudomonas aeruginosa] Length = 314 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 109/290 (37%), Positives = 160/290 (55%), Gaps = 3/290 (1%) Query: 1 MEKKPFRIGTRCSPLALAHA-FETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + RI TR S LAL A + + L H P + ++P++++GD++ + L +IG Sbjct: 1 MSSREIRIATRQSALALWQAEYVNSTGLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 GKGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLE 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L SV+GTS L R+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 QLPAGSVVGTSRLGRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGVIRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA Sbjct: 179 GFESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKR 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 L+G C+ IA +A +G L+ G+V DG DA +G Sbjct: 239 LNGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLADAEALG 288 >gi|332365713|gb|EGJ43471.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1059] Length = 306 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 113/308 (36%), Positives = 168/308 (54%), Gaps = 12/308 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKKLH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q+L DL Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISKREDVRDCLIFRQAGQTLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KR L Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ + L P+ QGA+ +E + + + L+ + E T V ERA LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLATVQDEKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA A KG ++ DG+ VS G + A Q +R + Sbjct: 240 MNADCTFPIAALAQKKGQDYQLEAMLAKEDGQCVF-VSLQGQDGQQL-----AEQAVRQL 293 Query: 300 SNKNVFNF 307 ++K Sbjct: 294 ADKGAVGM 301 >gi|213971710|ref|ZP_03399816.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato T1] gi|301386723|ref|ZP_07235141.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato Max13] gi|302062167|ref|ZP_07253708.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato K40] gi|302130377|ref|ZP_07256367.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213923528|gb|EEB57117.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato T1] Length = 313 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 107/296 (36%), Positives = 166/296 (56%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL Sbjct: 59 KGLFVKELETALLEDSADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + +AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYNAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IA +A +G ++ G+V G++ + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVQVAEAL 294 >gi|285019346|ref|YP_003377057.1| hydroxymethylbilane synthase [Xanthomonas albilineans GPE PC73] gi|283474564|emb|CBA17065.1| probable hydroxymethylbilane synthase protein [Xanthomonas albilineans] Length = 302 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 114/286 (39%), Positives = 165/286 (57%), Gaps = 4/286 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RI TR SPLAL + + L H P ++++P+ST+GD + +R+L IGGKGL Sbjct: 2 KILRIATRKSPLALWQSEYVAACLRRAH--PQLEVLLVPMSTRGDEVLDRSLAAIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++ G+ DCAVHS KD+P +L + +SA LPR D D IS+ +L L L Sbjct: 60 FLKELELAMLRGDADCAVHSLKDVPMELERPFVLSAILPRADSADALISNLYAALDALPL 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRR+A L R D+ ++D RG + TRL KL+N AI+LA AG++RL E+ Sbjct: 120 GARVGTSSLRRQAQLRARRPDLQLLDLRGNVNTRLAKLDNGDYDAIVLACAGLQRLGLER 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + L D+ P+P QGAI +E + A L V++ T V ERA L GS Sbjct: 180 RITQRLQAPDWLPAPAQGAIAVECRQDMAAACALFAVLDDVATRTCVEAERAMNRALHGS 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVL-ASDGKIFH-EVSRNGNRCDAIN 287 C +A FA +G L G+V +DG++ ++ R+ A+ Sbjct: 240 CHVPVAAFAQWRGEDLLLQGLVGDVADGRLVRAQIQRSAQDPQALG 285 >gi|28867368|ref|NP_789987.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato str. DC3000] gi|38257983|sp|Q88B91|HEM3_PSESM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|28850602|gb|AAO53682.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato str. DC3000] Length = 313 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 107/296 (36%), Positives = 166/296 (56%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + +AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYNAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IA +A +G ++ G+V G++ + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVQVAEAL 294 >gi|238018694|ref|ZP_04599120.1| hypothetical protein VEIDISOL_00538 [Veillonella dispar ATCC 17748] gi|237865165|gb|EEP66455.1| hypothetical protein VEIDISOL_00538 [Veillonella dispar ATCC 17748] Length = 319 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 108/301 (35%), Positives = 170/301 (56%), Gaps = 2/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + L ++ P + ++ +TKGDRI + L ++GGKGLFT Sbjct: 12 IRIGTRKSALALWQAEHISAELQRLY--PNITVELVHFNTKGDRILEKPLAQVGGKGLFT 69 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E+E+ + G+ID AVHS KDMPT+L +GL + A RE D +S ++L L + Sbjct: 70 AELEEAMHKGDIDIAVHSLKDMPTELPEGLTLGAISAREVPYDALVSPVYKTLDKLPEGA 129 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A LL R D+ V RG ++TRL+K+ K ++LA AG+KRL + I Sbjct: 130 CVGTSSLRRQAQLLHVRPDLKVEVIRGNVQTRLSKIETEKLDGVILAQAGLKRLGLDDQI 189 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ ++ P+ GQGA+ IE ++ + E++ IN E T +V ER+FL +L+G C+ Sbjct: 190 TQVFKADEMIPAVGQGALAIECRADDTEMLEMLAPINDEATRYAVEGERSFLRQLNGGCQ 249 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + L ++ + DGK +E +G A +G++ A+ + K++ Sbjct: 250 VPMGVHGTINKGQLILKAMIASLDGKTVYEGEISGPAKKAEILGKNLAKALYEEGGKHIV 309 Query: 306 N 306 + Sbjct: 310 D 310 >gi|262373963|ref|ZP_06067240.1| porphobilinogen deaminase [Acinetobacter junii SH205] gi|262310974|gb|EEY92061.1| porphobilinogen deaminase [Acinetobacter junii SH205] Length = 305 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 109/277 (39%), Positives = 161/277 (58%), Gaps = 2/277 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L +++ P + ++ T+GD+I + L +IGGKGL Sbjct: 2 KTLKIATRQSPLALWQAEHIRARLNELY--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ +L Sbjct: 60 FVKELEAALLDGRADLAVHSMKDVPMHLPEGLTLAVICEREDPLDAFVSNQYAHFDELPH 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK +L+ R D+ +ID RG + TRL+KL++ AI+LA AG+KRL + Sbjct: 120 GAKVGTSSLRRKCQILQQRPDLEIIDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLAE 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L P+ GQGA+ +E ++ + EL+ + HE T V ERAF A L+G Sbjct: 180 RIRHCLAPTLSLPAVGQGALGLECRADDQELLELISPLQHEVTSICVRAERAFNAYLEGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 C+ IAG+A + L+ G V + DGK + +G Sbjct: 240 CQVPIAGYATITQNQLHIEGRVGSVDGKTLLKEQLSG 276 >gi|146313619|ref|YP_001178693.1| porphobilinogen deaminase [Enterobacter sp. 638] gi|167008813|sp|A4WG12|HEM3_ENT38 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|145320495|gb|ABP62642.1| hydroxymethylbilane synthase [Enterobacter sp. 638] Length = 313 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 110/284 (38%), Positives = 156/284 (54%), Gaps = 2/284 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L H+ + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAQYVKQRLEACHQ--GLRVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL DL S Sbjct: 64 KELEIALLENRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNRYASLDDLPKGS 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL E I Sbjct: 124 VVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + E P+ GQGA+ IE +++ + + L+ +NH++T V ERA L+G C+ Sbjct: 184 RVAMPPELCLPAVGQGAVGIECRLDDDRTRALLSPLNHDETAIRVQAERAMNMRLEGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 I +A L+ +V A DG R G DA +G Sbjct: 244 VPIGSYAELINGELWLRALVGAPDGSQMVRGERRGLPQDAEMLG 287 >gi|89093768|ref|ZP_01166714.1| porphobilinogen deaminase [Oceanospirillum sp. MED92] gi|89081898|gb|EAR61124.1| porphobilinogen deaminase [Oceanospirillum sp. MED92] Length = 313 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 109/305 (35%), Positives = 177/305 (58%), Gaps = 4/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RI TR SPLAL A ++ L H P N+ ++ +++KGD+I + L ++GGKGL Sbjct: 3 RTIRIATRKSPLALWQAEYVKAELERHH--PGINVELLGMTSKGDKILDAPLAKVGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ +++GE D AVHS KD+P + +GL ++ PRE D F+S+T S+++L Sbjct: 61 FVKELEEAMLAGEADIAVHSMKDVPMEFPEGLGLAVICPREQPTDAFVSNTYNSIEELPE 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR+A + R D+ + RG + TRL KL++ + AI+LA AG+ RL+ + Sbjct: 121 GAVVGTSSLRREAQIREKRPDLQIKWLRGNVNTRLRKLDDGEYDAIILASAGLIRLEMPE 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ +++E P+ GQGA+ IE ++ + EL+K ++ ++T V+ ERA L+G Sbjct: 181 RIRSEISVEFSLPAGGQGAVGIECRTDDHELLELLKPLHDQETAWRVSAERAMNRRLEGG 240 Query: 244 CKSAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IA +A S LY G+V DG + G A +G A + Sbjct: 241 CQVPIACYATLNDDNSELYLRGLVAKPDGTLILRDEERGTPEQAEQLGITLADRLLAAGA 300 Query: 302 KNVFN 306 K++ + Sbjct: 301 KSILD 305 >gi|254522867|ref|ZP_05134922.1| porphobilinogen deaminase [Stenotrophomonas sp. SKA14] gi|219720458|gb|EED38983.1| porphobilinogen deaminase [Stenotrophomonas sp. SKA14] Length = 303 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 107/267 (40%), Positives = 152/267 (56%), Gaps = 3/267 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL + L H P ++ ++P+ST+GD + +R+L IGGKGLF Sbjct: 4 VRIATRKSPLALWQSEHVADRLRQAH--PGLHVELVPMSTRGDEVLDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ GE DCAVHS KD+P +L + A L R D D F+S+ SL+ L + + Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDAPFALPAMLTRHDPADGFVSNLYASLEALPIGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A L R D+ ++D RG + TRL KL+N AI+LA AG++RL + I Sbjct: 122 RVGTSSLRRQAQLRALRPDLELLDLRGNVNTRLAKLDNGGYDAIVLAVAGLERLGLGQRI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L + P+P QGA+ +E N + L ++ T V ERA L GSC Sbjct: 182 VARLQPPQWLPAPAQGAVAVECDGGNARLMALFAGLDDASTRACVEAERAMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGK 271 +A A +G L+ G+V ASDG+ Sbjct: 242 VPVAAIAQWQGDDLHLQGLVGSASDGR 268 >gi|189423573|ref|YP_001950750.1| porphobilinogen deaminase [Geobacter lovleyi SZ] gi|238058916|sp|B3E2H7|HEM3_GEOLS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189419832|gb|ACD94230.1| porphobilinogen deaminase [Geobacter lovleyi SZ] Length = 312 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 115/306 (37%), Positives = 172/306 (56%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A T+S L + P + ++ + T GD+I + L ++GG Sbjct: 1 MAPKRLRIGTRASQLALWQANWTKSELE--ARYPGIQVELVKIKTMGDKILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD FIS + + Sbjct: 59 KGLFVKEIEEAMLRGEIDLAVHSMKDVPTEFPEGLGLVVTTKREDPRDAFISDKV-TFSE 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A LL+ R D+ ++ RG +ETR+ KL + A++LA AG+ RL Sbjct: 118 LRQGARIGTSALRRQAQLLKARPDLEMVIIRGNVETRIRKLKEDNLDAVILAAAGLNRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V+ E+L+ + P+ GQGA+ +E +++ E + +NH DT +V ERA L Sbjct: 178 FTDVVTELLDTDFSIPAIGQGALGLECRLDDNATIEALAFLNHADTAAAVAAERALLKRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA G TL G + + DGK +G+ DA+ +G + A + Sbjct: 238 EGGCQVPIAAHGTVSGDTLTLVGFIASVDGKQTVRDRISGSTADAVKLGTELADRLLAAG 297 Query: 301 NKNVFN 306 K + Sbjct: 298 GKAILE 303 >gi|254447439|ref|ZP_05060905.1| porphobilinogen deaminase [gamma proteobacterium HTCC5015] gi|198262782|gb|EDY87061.1| porphobilinogen deaminase [gamma proteobacterium HTCC5015] Length = 313 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 115/293 (39%), Positives = 167/293 (56%), Gaps = 4/293 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RI TR SPLAL A E ++ + H P +I ++ ++TKGD+I + L +IGGKGL Sbjct: 2 KTLRIATRQSPLALWQA-EDVAAKLKAH-YPDLDIELVKMTTKGDKILDTPLAKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMP--TKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 F +E+E ++ G D AVHS KD+P ++ +GL +S L RED RD F+S+ SL +L Sbjct: 60 FIKELEVGMLEGRADIAVHSMKDVPVDSEFPEGLHLSVILEREDPRDAFVSNRYNSLDEL 119 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT+SLRR+ +L + RG + TRL KL++ + AI+LA AG+ RL Sbjct: 120 PEGAVVGTASLRRQCQVLGRYPHLKTAVLRGSVGTRLGKLDDGQFDAIVLASAGLMRLGL 179 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I L E P+ GQGA+ IE ++ + +L+ + DT + ERA A L Sbjct: 180 EERITAKLPPEISLPAIGQGAVGIECRKDDTELNKLLAPLADRDTTTRLKAERALNARLQ 239 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 G C+ IAG+A +G L G+V A DG + R G R A +IG A+ Sbjct: 240 GGCQVPIAGYAELEGDQLSMRGLVGAPDGSKLYTSERRGPRDQAADIGLAVAE 292 >gi|330876446|gb|EGH10595.1| porphobilinogen deaminase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 313 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 107/296 (36%), Positives = 165/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLEIRFLRGNVNTRLAKLDGGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IA +A +G ++ G+V G++ + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVQVAEAL 294 >gi|313496556|gb|ADR57922.1| HemC [Pseudomonas putida BIRD-1] Length = 313 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 105/265 (39%), Positives = 154/265 (58%), Gaps = 2/265 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H + ++P+ ++GD++ + L +IGG Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAHT--GLQVTLVPMVSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHVDTADRVMAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIV 265 +G C+ IA +A +G L+ G+V Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLV 263 >gi|289434836|ref|YP_003464708.1| hypothetical protein lse_1471 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171080|emb|CBH27622.1| hemC [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 309 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 116/297 (39%), Positives = 169/297 (56%), Gaps = 7/297 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSGWVIARLKENY--PEIDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L G ID AVHS KD+P+ + +GL I A RE D F+ +T +S DL Sbjct: 60 LFVSEVEQALSDGAIDFAVHSMKDVPSSIKEGLTIGAIPKRESALDCFVFNTVESFHDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179 +VIGTSSLRR A +LR R D + RG I+TRL KL++ AI+LA AG+ R L Sbjct: 120 TAAVIGTSSLRRAAQILRQRPDFVIKPIRGNIDTRLQKLHDENFDAIILAKAGLSRMGWL 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + E ++ E P+ GQGA+ IE N+ + +++ I+HE+T V ER FL + Sbjct: 180 ENTTLKLEDISPELCLPAVGQGALAIECRENDKQICDMLASIHHEETGICVEAERVFLKK 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L+G C+ IAGFA + F G+V +DG R G + + IG A+ + Sbjct: 240 LNGGCEIPIAGFATKTAGQIKFKGLVGNADGSTILSAERTGE--NPMTIGNQVAEAL 294 >gi|328945742|gb|EGG39893.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1087] Length = 306 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 112/308 (36%), Positives = 169/308 (54%), Gaps = 12/308 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q+L DL Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179 ++IGTSS+RR+ L R D++ RG I+TR+ KL + +I+LA AG+KR L Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDSIVLAMAGLKRLGWL 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ + L P+ QGA+ +E + + ++L+ + E T V ERA LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDKELRQLLATVQDEKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA A KG ++ DG+ VS G + A Q +R + Sbjct: 240 MNADCTFPIAALAQKKGQDYQLEAMLAKEDGQCVF-VSLQGQDGQEL-----AEQAVRQL 293 Query: 300 SNKNVFNF 307 ++K Sbjct: 294 ADKGAVGM 301 >gi|303229236|ref|ZP_07316032.1| hydroxymethylbilane synthase [Veillonella atypica ACS-134-V-Col7a] gi|302516091|gb|EFL58037.1| hydroxymethylbilane synthase [Veillonella atypica ACS-134-V-Col7a] Length = 312 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 106/301 (35%), Positives = 170/301 (56%), Gaps = 2/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL + +S L ++ P + ++ +TKGDRI ++ L E+GGKGLFT Sbjct: 5 IRIGTRKSALALWQSEYVKSELQRLY--PGITVELVHFNTKGDRILDKPLAEVGGKGLFT 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E+E + +G+ID AVHS KDMPT+L GL + A RE D +S ++L L + Sbjct: 63 AELEAAMHAGDIDIAVHSLKDMPTELPDGLTLGAISKREVPFDALVSPKYKTLDQLPEGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSSLRR+A LL R D+ + RG ++TRL K+ ++LA AG+KRL + I Sbjct: 123 RIGTSSLRRQAQLLHRRPDLQIEVIRGNVQTRLGKIETEGLDGVVLAQAGLKRLGLDDRI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ ++ P+ GQGA+ IE ++ + E++ I+ E T +V ER+FL +L+G C+ Sbjct: 183 TQVFTADEMIPAVGQGALAIECRSDDTEMLEILSKIDDEPTRLAVEGERSFLNQLNGGCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + + + L ++ + DGK +E +G + +G++ A+ + K++ Sbjct: 243 VPMGVYGTVEKGQLILKALIASLDGKTVYEGELSGPAKKGVMLGKNLAKALYEEGGKHIV 302 Query: 306 N 306 Sbjct: 303 E 303 >gi|324993558|gb|EGC25478.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK405] gi|324995130|gb|EGC27042.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK678] gi|327458927|gb|EGF05275.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1057] gi|327461831|gb|EGF08162.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1] Length = 306 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 112/308 (36%), Positives = 168/308 (54%), Gaps = 12/308 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKKLH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q+L DL Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KR L Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ + L P+ QGA+ +E + + ++L+ + E T V ER LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDEKTAAEVAVERVVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA FA G ++ DG+ VS G + A Q +R + Sbjct: 240 MNADCTFPIAAFAQKNGQDYQLEAMLAKEDGQCVF-VSLKGQDGQQL-----AEQAVRQL 293 Query: 300 SNKNVFNF 307 ++K Sbjct: 294 ADKGAVGM 301 >gi|90023307|ref|YP_529134.1| hydroxymethylbilane synthase [Saccharophagus degradans 2-40] gi|89952907|gb|ABD82922.1| hydroxymethylbilane synthase [Saccharophagus degradans 2-40] Length = 308 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 111/295 (37%), Positives = 174/295 (58%), Gaps = 6/295 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RI TR S LAL A + ++ L ++ P + + PL ++GD+I + L ++GGKGL Sbjct: 2 KKIRIATRKSELALWQANDVKAKLEALY--PSLEVELFPLVSRGDKILDVPLAKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L++ E D AVHS KD+P + +GL+++ L RED RD ++S ++L L Sbjct: 60 FVKELEHALLADEADIAVHSMKDVPMEFPEGLELAVILEREDPRDAWVSAGYENLDALPA 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 V+GTSSLRR++ +L R DI+V RG + TRL KL+ + AI+LA AG+KRLK Sbjct: 120 GGVVGTSSLRRQSQILARRPDITVKFLRGNVNTRLAKLDAGEYDAIILAAAGLKRLKFGD 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L+ E+ P+ GQGA+ IE + + +L++ ++H T + V ERA L+G Sbjct: 180 RIRSYLSPEESLPAGGQGAVGIECRSADSETLKLLQALHHTITAEQVLAERAMNRRLEGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCDAINIGRDAAQYI 296 C+ I FA + + L+ G+V DG I+ E++ G D +G + A+ + Sbjct: 240 CQVPIGCFAVHQNNQLWLRGLVADPDGSKVIYDEMT--GAAADGEKMGVELAEKL 292 >gi|194367302|ref|YP_002029912.1| porphobilinogen deaminase [Stenotrophomonas maltophilia R551-3] gi|238059002|sp|B4SJT8|HEM3_STRM5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|194350106|gb|ACF53229.1| porphobilinogen deaminase [Stenotrophomonas maltophilia R551-3] Length = 303 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 107/267 (40%), Positives = 153/267 (57%), Gaps = 3/267 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL + L H P ++ ++P+ST+GD + +R+L IGGKGLF Sbjct: 4 VRIATRKSPLALWQSEHVADRLRQAH--PGLHVELVPMSTRGDEVLDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ GE DCAVHS KD+P +L + + A L R D D F+S+ SL L + + Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDEPFALPAMLTRHDPADGFVSNLYASLDALPIGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A L R D+ ++D RG + TRL KL+N AI+LA AG++RL + I Sbjct: 122 RVGTSSLRRQAQLRALRPDLQLLDLRGNVNTRLAKLDNGGYDAIVLAVAGLERLGLGERI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L + P+P QGA+ +E +N + L ++ T V ERA L GSC Sbjct: 182 VARLQPPQWLPAPAQGAVAVECDGSNARLMALFAGLDDAATRACVEAERAMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGK 271 +A A +G L+ G+V ASDG+ Sbjct: 242 VPVAAIAQWQGQDLHLQGLVGSASDGR 268 >gi|242278118|ref|YP_002990247.1| porphobilinogen deaminase [Desulfovibrio salexigens DSM 2638] gi|259647794|sp|C6BYB7|HEM3_DESAD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|242121012|gb|ACS78708.1| porphobilinogen deaminase [Desulfovibrio salexigens DSM 2638] Length = 308 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 110/299 (36%), Positives = 165/299 (55%), Gaps = 2/299 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A L + + P + ++ + TKGD+I + L ++GGKGLF +E Sbjct: 6 IATRGSKLALWQANHISDLLREEY--PGIEVQLLKIKTKGDKILDVPLAKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ L+ G D AVHS KD+PT+L +GL++ PRE D +S SLKDL +V+ Sbjct: 64 IEEALLDGRADLAVHSMKDVPTELPEGLEVGIIPPREAETDTLLSVKYDSLKDLPAGAVV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR++ +L R D+ + RG ++TR+ KL N + AI++A AG+ RLK E Sbjct: 124 GTSSLRRQSQVLALRDDLKIESLRGNLDTRVGKLLNGEFDAIVVATAGLNRLKLSAPKSE 183 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 IL F P+ QGA+ IE + + + Q+++ ++ E T V ER FL LDG C+ Sbjct: 184 ILGPPTFLPAVAQGALGIEYRIEDTEIQDILAFLHDEMTARQVKAERGFLTGLDGGCQVP 243 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 IA ++ + + G V DG + + G DA +IG A+ + K + + Sbjct: 244 IAAWSQLESDQVKLTGFVADIDGSSPIRMEKTGPAEDAWDIGLALAEEVLAAGAKEILD 302 >gi|224370660|ref|YP_002604824.1| HemC [Desulfobacterium autotrophicum HRM2] gi|223693377|gb|ACN16660.1| HemC [Desulfobacterium autotrophicum HRM2] Length = 325 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 116/294 (39%), Positives = 160/294 (54%), Gaps = 2/294 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK +IGTR S LAL A + + D + P + I+ + T GD I +R L+ +GGKG Sbjct: 20 KKTIKIGTRGSKLALWQANHVKDRIED--QFPETEVEIMTIKTTGDMIVDRPLSMVGGKG 77 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIEK L+ ID AVHS KDMP +L GL I A RE+ DV IS+ SL DL Sbjct: 78 LFVKEIEKALLESTIDMAVHSMKDMPGELPPGLVIGAVPARENPFDVLISNNNLSLADLP 137 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IGTSSLRR + + R DI RG ++TRL KL + A LLA AG+ RL + Sbjct: 138 KGARIGTSSLRRASQIKHARPDIETASIRGNLDTRLKKLAAGEFDATLLAAAGLIRLGMK 197 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI + + P+ GQGA+CIE+ + ++ +NH +T V+ ERAFL LDG Sbjct: 198 TVITQYFDETIMIPAVGQGALCIESRQEDLDIAPVLAFLNHGETHTVVSGERAFLRRLDG 257 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 SC +A F + + G+V + DG+ + + G D G A+ + Sbjct: 258 SCHIPVACFGRLEDHRVILTGLVASEDGRTILKETVAGTPEDPQKAGIALAETL 311 >gi|148545465|ref|YP_001265567.1| porphobilinogen deaminase [Pseudomonas putida F1] gi|167008818|sp|A5VWX3|HEM3_PSEP1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|148509523|gb|ABQ76383.1| hydroxymethylbilane synthase [Pseudomonas putida F1] Length = 313 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 105/265 (39%), Positives = 154/265 (58%), Gaps = 2/265 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H + ++P+ ++GD++ + L +IGG Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAHT--GLQVTLVPMVSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLET 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHVDTADRVIAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIV 265 +G C+ IA +A +G L+ G+V Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLV 263 >gi|323353345|ref|ZP_08087878.1| hydroxymethylbilane synthase [Streptococcus sanguinis VMC66] gi|322121291|gb|EFX93054.1| hydroxymethylbilane synthase [Streptococcus sanguinis VMC66] Length = 306 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 114/309 (36%), Positives = 170/309 (55%), Gaps = 14/309 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKAIH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q+L +L Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLANLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KR L Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ + L P+ QGA+ +E + + + L+ + E T V ERA LA+ Sbjct: 180 DQSRLHIQTLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK-IFHEVSRNGNRCDAINIGRDAAQYIRF 298 ++ C IA FA G ++ DG+ IF VS G + A Q +R Sbjct: 240 MNADCTFPIAAFAQKNGQGYQLEAMLAKEDGQCIF--VSLQGQDGQEL-----AEQAVRQ 292 Query: 299 ISNKNVFNF 307 +++K Sbjct: 293 LADKGAVGM 301 >gi|165976435|ref|YP_001652028.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190150336|ref|YP_001968861.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303251057|ref|ZP_07337243.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253601|ref|ZP_07339739.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307245920|ref|ZP_07528003.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307248006|ref|ZP_07530035.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307252646|ref|ZP_07534539.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307257056|ref|ZP_07538831.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307259334|ref|ZP_07541061.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307261494|ref|ZP_07543163.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263677|ref|ZP_07545286.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|165876536|gb|ABY69584.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189915467|gb|ACE61719.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302647521|gb|EFL77739.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650067|gb|EFL80237.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306853139|gb|EFM85361.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306855404|gb|EFM87578.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306859891|gb|EFM91911.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306864427|gb|EFM96335.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306866570|gb|EFM98431.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306868777|gb|EFN00585.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870990|gb|EFN02725.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 314 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 110/294 (37%), Positives = 162/294 (55%), Gaps = 2/294 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR SPLAL A + L + P ++ ++ + TKGD I + L +IGGKG Sbjct: 7 KDTLRIATRQSPLALWQANFVKDELE--KRFPELSVELVTMVTKGDVILDTPLAKIGGKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L Sbjct: 65 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDELP 124 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 125 AGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMP 184 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ +++E P+ GQGA+ IET V++ + + +NH T V ERA L G Sbjct: 185 ERIRSFISVEQSLPAAGQGAVGIETRVDDERVLNYLATLNHNPTACCVIAERAMNTRLQG 244 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ I GFA G+ + +V A DG S +R +A +G A+ + Sbjct: 245 GCQVPIGGFATLNGNEITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQL 298 >gi|288553611|ref|YP_003425546.1| porphobilinogen deaminase [Bacillus pseudofirmus OF4] gi|288544771|gb|ADC48654.1| porphobilinogen deaminase [Bacillus pseudofirmus OF4] Length = 310 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 116/301 (38%), Positives = 173/301 (57%), Gaps = 6/301 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL + L K P+N + + TKGDRI + TL+++GGKGLF +E Sbjct: 6 IGSRRSNLALTQTDWVINQLK--KKEVPYNFEVKKIVTKGDRILDVTLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ L + EID AVHS KD+P+ + +G ++A RED RD FIS LKDL +++ Sbjct: 64 IEQALENKEIDIAVHSMKDVPSVMPEGFSLAAITEREDARDAFISLDHVKLKDLPSGAIV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A LL R D+ V RG +ETRL KL AI+LA AG+ RL E+++ Sbjct: 124 GTSSLRRSAQLLAERPDLEVKWIRGNVETRLRKLKEEDFSAIILAAAGLNRLGYSEELVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E L E P+ GQGA+ +E ++ + EL++ +N E T +V ER FL +++G C+ Sbjct: 184 EYLEPEMCVPAVGQGALGLECRSDDQEVIELIQKLNDEATALTVTAERTFLHKMEGGCQV 243 Query: 247 AIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IAG+A + + +V + DGK + + G D + +G + ++ + K + Sbjct: 244 PIAGYATMQEDGQVSLTALVGSPDGKTILKDTVVGQ--DPVKVGEEVSERLLEKGAKEIL 301 Query: 306 N 306 + Sbjct: 302 D 302 >gi|311693131|gb|ADP96004.1| porphobilinogen deaminase [marine bacterium HP15] Length = 313 Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 111/308 (36%), Positives = 172/308 (55%), Gaps = 7/308 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVI--IPLSTKGDRITNRTLTEI 58 M K+ RI TR S LAL A ++ L +H NI + + + T+GD+I + L +I Sbjct: 1 MSKRTLRIATRSSALALWQAEFIKAELERLHD----NITVELVKIKTQGDKILDVPLAKI 56 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLF +E+E+ ++ G D AVHS KD+P + +GL + A RED D F+S+ ++ Sbjct: 57 GGKGLFVKELEEAMLDGRADLAVHSMKDVPMEFPEGLGLVAICEREDPTDAFVSNHYDNV 116 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L +V+GT+SLRR+A L +R D+ + RG + TRL KL+ + AI+LA +G+KR Sbjct: 117 DALPHGAVVGTASLRREAQLRAYRPDLEIRVLRGNVNTRLAKLDAGEYEAIVLASSGLKR 176 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + I+ L P+ GQGA+ IE V++ +++ + H+DTWD V ERA Sbjct: 177 LGFHERIRYCLPDTLSLPAVGQGALGIECRVDDQDLLAMLEPLKHKDTWDRVTAERALNR 236 Query: 239 ELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L+G C+ IA +A + T++ G+V A DG V R + +GR+ A+ + Sbjct: 237 RLEGGCQVPIAAYALLEDDDTIWLRGLVGAVDGTQIFRVEGRAPRAEGERLGRELAEDLL 296 Query: 298 FISNKNVF 305 + V Sbjct: 297 ALGADKVL 304 >gi|307250258|ref|ZP_07532212.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857699|gb|EFM89801.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 314 Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 109/294 (37%), Positives = 163/294 (55%), Gaps = 2/294 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR SPLAL A + L + P ++ ++ + TKGD I + +L +IGGKG Sbjct: 7 KDTLRIATRQSPLALWQANFVKDELE--KRFPELSVELVTMVTKGDVILDTSLAKIGGKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L Sbjct: 65 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDELP 124 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 125 AGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMP 184 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ +++E P+ GQGA+ IET V++ + + +NH T V ERA L G Sbjct: 185 ERIRSFISVEQSLPAAGQGAVGIETRVDDERVLNYLATLNHNPTACCVIAERAMNTRLQG 244 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ I GF+ G+ + +V A DG S +R +A +G A+ + Sbjct: 245 GCQVPIGGFSTLNGNEITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQL 298 >gi|330965074|gb|EGH65334.1| porphobilinogen deaminase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 313 Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 107/296 (36%), Positives = 165/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLEIRFLRGNVNTRLAKLDGGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IA +A +G ++ G+V G++ + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVHVAEAL 294 >gi|26986930|ref|NP_742355.1| porphobilinogen deaminase [Pseudomonas putida KT2440] gi|38258017|sp|Q88RE5|HEM3_PSEPK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|24981540|gb|AAN65819.1|AE016210_7 porphobilinogen deaminase [Pseudomonas putida KT2440] Length = 313 Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 105/265 (39%), Positives = 154/265 (58%), Gaps = 2/265 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H + ++P+ ++GD++ + L +IGG Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAHT--GLQVTLVPMVSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHVDTADRVIAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIV 265 +G C+ IA +A +G L+ G+V Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLV 263 >gi|330985679|gb|EGH83782.1| porphobilinogen deaminase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 313 Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 107/296 (36%), Positives = 165/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL + Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ ++ AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDASEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IA +A +G ++ G+V G + + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGSVLLHAEARAPQTSAQALGVQVAEAL 294 >gi|299535618|ref|ZP_07048939.1| porphobilinogen deaminase [Lysinibacillus fusiformis ZC1] gi|298728818|gb|EFI69372.1| porphobilinogen deaminase [Lysinibacillus fusiformis ZC1] Length = 310 Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 116/301 (38%), Positives = 161/301 (53%), Gaps = 8/301 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + L P + + TKGD+I + L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQTNWFINELKAAGV--PFEFEVKEIVTKGDQILDVQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ L EID AVHS KDMP L GL I PRED RD FIS DL +V+ Sbjct: 64 IEQALYDKEIDFAVHSMKDMPAVLPDGLVIGCIPPREDARDAFISKGHVKFADLPAGAVV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A LL R DI + RG ++TRL KL + AI+LA AG+KRL + V+ Sbjct: 124 GTSSLRRSAQLLTVRPDIEIKWIRGNVDTRLAKLETEEYDAIILAAAGLKRLGWSDDVVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E L +E P+ QG++ IE ++ + + + TW + ERAFLA +DG C+ Sbjct: 184 EFLPVEQCLPAVAQGSLGIECRADDAELLAELGKLTDSFTWQEAHAERAFLAAMDGGCQV 243 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 IAG+A G + G+V A D + + + G DA IG + A ++ + F+ Sbjct: 244 PIAGYATSIGEEITLTGLVAAPDASVVFKETVVGT--DAQKIGEELAA---ILTEQGAFD 298 Query: 307 F 307 Sbjct: 299 L 299 >gi|269103733|ref|ZP_06156430.1| porphobilinogen deaminase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163631|gb|EEZ42127.1| porphobilinogen deaminase [Photobacterium damselae subsp. damselae CIP 102761] Length = 294 Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 100/262 (38%), Positives = 157/262 (59%), Gaps = 3/262 (1%) Query: 29 DVHKIPPHNIV-IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDM 87 ++ K P +V ++P+ TKGD I + L ++GGKGLF +E+E ++ G D AVHS KD+ Sbjct: 10 ELEKAHPGLVVELVPMVTKGDVILDTPLAKVGGKGLFVKELEVAMLEGRADIAVHSMKDV 69 Query: 88 PTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISV 147 P + +GL + RED RD F+S+ SL++L S++GTSSLRR+ L R D+ V Sbjct: 70 PVEFPQGLGLVTICEREDPRDAFVSNRYNSLEELPQGSIVGTSSLRRQCQLRSQRPDLIV 129 Query: 148 IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIET 207 D RG + TRL KL++ + AI+LA AG+KRLK + I+ + E P+ GQGA+ IE Sbjct: 130 KDLRGNVNTRLRKLDDGEYDAIILACAGLKRLKMDDRIRAAIAPETSLPAVGQGAVGIEC 189 Query: 208 HVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLA 267 +++ + ++L+ +NH++T V CERA L G C+ I +A +G ++ +V Sbjct: 190 RLDDTRVRDLLAALNHQETATRVLCERAMNNRLQGGCQVPIGSYAELQGDQIWLRALVGE 249 Query: 268 SDGK--IFHEVSRNGNRCDAIN 287 DG + E+S + N +A+ Sbjct: 250 PDGSQIVRGEISGSANDAEALG 271 >gi|291485230|dbj|BAI86305.1| porphobilinogen deaminase [Bacillus subtilis subsp. natto BEST195] Length = 314 Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 120/303 (39%), Positives = 169/303 (55%), Gaps = 13/303 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-IIPLSTKGDRITNRTLTEIGGKG 62 + ++G+R S LA+ T+ + + +I P + I + TKGDRI + TL+++GGKG Sbjct: 3 RTIKVGSRRSKLAMTQ---TKWVIQKLKEINPSFVFEIKEIVTKGDRIVDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L++ EID AVHS KDMP L +GL I RED RD IS L ++ Sbjct: 60 LFVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEMK 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-K 181 +VIGTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+ K Sbjct: 120 EGAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWK 179 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++ Sbjct: 180 QDVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAME 239 Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGN-------RCDAINIGRDAA 293 G C+ IAG++ G + G+V + DGKI + + GN RC A+ R A Sbjct: 240 GGCQVPIAGYSVLNGQDEIEMTGLVASPDGKIIFKETVTGNDPEEVGKRCAALMADRGAK 299 Query: 294 QYI 296 I Sbjct: 300 DLI 302 >gi|260888475|ref|ZP_05899738.1| hydroxymethylbilane synthase [Selenomonas sputigena ATCC 35185] gi|330838215|ref|YP_004412795.1| Porphobilinogen deaminase [Selenomonas sputigena ATCC 35185] gi|260861672|gb|EEX76172.1| hydroxymethylbilane synthase [Selenomonas sputigena ATCC 35185] gi|329745979|gb|AEB99335.1| Porphobilinogen deaminase [Selenomonas sputigena ATCC 35185] Length = 311 Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 116/306 (37%), Positives = 173/306 (56%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+K IGTR S LAL A + L + + P ++V ++TKGDR+ + L +IGG Sbjct: 1 MKKDTIVIGTRSSKLALWQADYVEAKLRE--RYPELHVVQKRMTTKGDRVLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ +++GEID AVHS KDMPT+L +GL ++A R D D +S Q+L + Sbjct: 59 KGLFTKELEQAMLAGEIDLAVHSLKDMPTELPEGLMLAAVTERFDPGDAVVSPRYQTLAN 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+A LL R D+ ++ RG + TRL KL AI+LA AG+KRL Sbjct: 119 LPQGAKVGTSSLRRRAQLLAKRPDLEIVSLRGNVNTRLKKLEEENFDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I EIL E P+ GQGA+ IE ++ L+ ++ T + ERAFLA + Sbjct: 179 FHDRITEILPREICLPAVGQGALAIEARADDEATLSLIAFLDDAATRAAARAERAFLARV 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ + +A L ++ + DG+ + + G+ DA IGR A+ + + Sbjct: 239 EGGCQVPVGVYAEAADEALEMEAVIASIDGERLYRKKKAGSALDAEKIGRALAEELLAMG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 GKEILQ 304 >gi|301155139|emb|CBW14603.1| hydroxymethylbilane synthase [Haemophilus parainfluenzae T3T1] Length = 310 Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 103/267 (38%), Positives = 156/267 (58%), Gaps = 2/267 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A + L H P ++ ++P+ TKGD I + L +IGGKGL Sbjct: 5 KTLKIATRQSPLALWQANFVKDQLEKFH--PTLSVELVPMVTKGDVILDSPLAKIGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ D AVHS KD+P + +GL +S RED RD F+S+T +SL +L Sbjct: 63 FVKELENALLEKRADIAVHSMKDVPMEFPEGLGLSVICKREDPRDAFVSNTYRSLDELPQ 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+ L + R D+ + RG + TRL+KL+N++ AI+LA AG+ RL + Sbjct: 123 GAIVGTSSLRRQCQLKQLRPDLDIRSLRGNVGTRLSKLDNSEYDAIILASAGLIRLGLAE 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + +E P+ GQGA+ IE V++ + + L+ ++ T V ERA L G Sbjct: 183 RIASFIEVEQSLPAAGQGAVGIECRVDDEEVKALLAPLSDATTTTCVLAERAMNTRLQGG 242 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG 270 C+ I G+A + ++ +V +DG Sbjct: 243 CQVPIGGYAIEQNGEIFLRALVGEADG 269 >gi|295399407|ref|ZP_06809389.1| porphobilinogen deaminase [Geobacillus thermoglucosidasius C56-YS93] gi|312110034|ref|YP_003988350.1| porphobilinogen deaminase [Geobacillus sp. Y4.1MC1] gi|294978873|gb|EFG54469.1| porphobilinogen deaminase [Geobacillus thermoglucosidasius C56-YS93] gi|311215135|gb|ADP73739.1| porphobilinogen deaminase [Geobacillus sp. Y4.1MC1] Length = 310 Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 115/291 (39%), Positives = 167/291 (57%), Gaps = 6/291 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL L + P + + TKGD+I + TL+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQTNWVIEQLRQLG--APFEFEVKEIVTKGDKILDVTLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE +++ EID AVHS KDMP L GL I PRED RDV IS ++ DL +V+ Sbjct: 64 IEHAMLNNEIDMAVHSMKDMPAVLPDGLIIGCVPPREDHRDVLISKNKETFADLPSGAVV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+ VI Sbjct: 124 GTSSLRRSAQLLAKRPDLTIKWIRGNIDTRLAKLQTEDYDAIVLAAAGLVRMGWASDVIT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E L + P+ GQGA+ +E ++ + +E ++ +N DT +V ERAFL +L+G C+ Sbjct: 184 EYLATDVCLPAVGQGALAVECRESDEELREWLQKLNDIDTERAVYAERAFLRQLEGGCQV 243 Query: 247 AIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 IAG+A+ + +V + DGK ++ + +G+ D N+G AA + Sbjct: 244 PIAGYAHVNNQNDIVLTALVASPDGKELYKETVSGS--DPENVGTTAADLL 292 >gi|310643595|ref|YP_003948353.1| phosphate abc transporter, atpase subunit [Paenibacillus polymyxa SC2] gi|309248545|gb|ADO58112.1| Phosphate ABC transporter, ATPase subunit [Paenibacillus polymyxa SC2] Length = 308 Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 110/277 (39%), Positives = 163/277 (58%), Gaps = 4/277 (1%) Query: 8 IGTRCSPLAL---AHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +G+R S LAL H E ++L H + VI + TKGDRI + TL+++GGKGLF Sbjct: 6 VGSRQSALALTQTGHVIEDLNALCAEHGLD-LQFVIKKILTKGDRILDVTLSKVGGKGLF 64 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE+ +++GEID AVHS KDMP++L +GL A RED RD I+ A+SL+DL Sbjct: 65 VKEIEQAMLAGEIDMAVHSMKDMPSELPEGLVNGAVPRREDPRDCLITLGAKSLEDLPSG 124 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR + + R D+ + RG I++RL KL AI+LA AG+ R+ + Sbjct: 125 AKVGTSSLRRASQIKSMRPDLQLEPVRGNIDSRLKKLETEGFDAIILAAAGLHRMGWKDR 184 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + E P+ GQGA+ IE ++ + L+++ NH+DT +V ER FL L+G C Sbjct: 185 ITSYIPEEACLPAVGQGALGIECRASDEELLALLRLYNHQDTSATVEAERTFLGVLNGGC 244 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281 + I A G + G+V + DG++ + + GN Sbjct: 245 QVPIGAHAVWAGQEISLTGMVGSPDGEVILKETLQGN 281 >gi|149199469|ref|ZP_01876504.1| Prolyl 4-hydroxylase, alpha subunit [Lentisphaera araneosa HTCC2155] gi|149137404|gb|EDM25822.1| Prolyl 4-hydroxylase, alpha subunit [Lentisphaera araneosa HTCC2155] Length = 307 Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 117/308 (37%), Positives = 174/308 (56%), Gaps = 12/308 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LAL A +S L++V P I + + T+GD+I + +L +IGGKGLF Sbjct: 3 LRIATRGSQLALWQAEHVKSRLLEVD--PSLEIELKIIKTQGDKILDVSLAKIGGKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ ++ E D AVHS KD+P +L +GL + A L RED RD F+S+ +SL +L + Sbjct: 61 KEIEQAMMDDEADLAVHSMKDVPAELPEGLILQAILEREDPRDAFVSNKYKSLDELPEGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR + L R + + RG + TRL KL+++K AI+LA AG+ RL+ I Sbjct: 121 VVGTSSLRRASQLYR-QYPVKTELLRGNVNTRLAKLDDDKYDAIILAAAGLIRLEFGDRI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L+ + F PSPGQGA+ IE ++ + L+ +NH +T V ER F + GSC+ Sbjct: 180 ADSLDPDKFIPSPGQGAVGIECREDDAELCALLNKLNHTETSIRVKVEREFNLAIGGSCQ 239 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN---------IGRDAAQYI 296 +A G + V + DGK ++ +G+ D I R AA+ I Sbjct: 240 VPAGCYATIDGDSFELRAFVASPDGKEYYREDMSGDLKDLPGKGTEIANKLIARGAAEII 299 Query: 297 RFISNKNV 304 + + K+V Sbjct: 300 KDLLGKDV 307 >gi|88813066|ref|ZP_01128308.1| porphobilinogen deaminase [Nitrococcus mobilis Nb-231] gi|88789699|gb|EAR20824.1| porphobilinogen deaminase [Nitrococcus mobilis Nb-231] Length = 309 Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 106/294 (36%), Positives = 163/294 (55%), Gaps = 2/294 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ RI TR SPLAL A + L + P + ++ ++T+GDRI + L IGG Sbjct: 1 MSRRRLRIATRKSPLALWQAEHVAAELR--RRYPELEVELVAMTTRGDRILDTPLARIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K LF +E+E+ + G D AVHS KD+P +L +G+ + L RED D F+++ Q L Sbjct: 59 KALFVKELERGIWEGRADIAVHSIKDVPAELPEGMHLPVVLEREDPCDAFVANLYQDLAA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + + +GT+SLRR+ L R D+ V RG ++TRL KL + K AI+LA AG++RL Sbjct: 119 LPIGARVGTASLRRECQLRAQRPDLRVGTLRGNVQTRLAKLESGKFDAIVLAAAGLRRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L E P+ GQGA+ IE ++ + EL+ + H ++ + ERA A L Sbjct: 179 LAERIRCTLTPEQSLPAVGQGALGIECRSDDREINELIAPLTHSPSYLRITAERAVNARL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 +GSC+ IA FA GS ++ +V + DG G +++G A+ Sbjct: 239 EGSCQVPIAAFAVLDGSNIWLRALVGSRDGSCVLRGEIRGPAGTGVSLGGQLAE 292 >gi|255658552|ref|ZP_05403961.1| hydroxymethylbilane synthase [Mitsuokella multacida DSM 20544] gi|260849356|gb|EEX69363.1| hydroxymethylbilane synthase [Mitsuokella multacida DSM 20544] Length = 315 Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 113/290 (38%), Positives = 166/290 (57%), Gaps = 3/290 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ IGTR S LAL A L + P + ++TKGD+I + L +IGG Sbjct: 1 MKNDTIVIGTRSSKLALWQADYVADCLR--KRYPELRVEKKLMTTKGDKILDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ +++G ID AVHS KDMPT++ +GL ISA R D D +S ++L++ Sbjct: 59 KGLFTKELEQDMLAGGIDIAVHSLKDMPTEVPEGLVISAITERFDPGDAVVSPKYRTLEN 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRRKA LL R D+ + D RG + TRL KL AI+LA AG+KRL Sbjct: 119 LPQGAKVGTSSLRRKAQLLHARPDLQISDLRGNVNTRLEKLEREHFDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E+L E P+ GQGA+ IET N+ + + L+ +N E T ERAFLA + Sbjct: 179 FADRITEVLPREMVLPAVGQGALAIETRENDREVRNLIAFLNDEATVACARAERAFLARV 238 Query: 241 DGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ + +A + L+ ++ + DG + + G+ +A ++G Sbjct: 239 EGGCQVPVGVYAVPEAEGRLHVEAVIASLDGARLYRDAAVGSAAEAESLG 288 >gi|94969590|ref|YP_591638.1| porphobilinogen deaminase [Candidatus Koribacter versatilis Ellin345] gi|123256362|sp|Q1INI6|HEM3_ACIBL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|94551640|gb|ABF41564.1| hydroxymethylbilane synthase [Candidatus Koribacter versatilis Ellin345] Length = 311 Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 103/291 (35%), Positives = 168/291 (57%), Gaps = 6/291 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LAL A + L + H + + + T GD+I + L ++G KG+FT Sbjct: 4 LRIGSRGSQLALWQANHISALLRERG----HEVELEIIKTTGDKILDVALAKVGTKGMFT 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L +G++D AVHS KD+PT+L +G +++A RE+ RDVF+S S+ L + Sbjct: 60 KEIEEALAAGKVDVAVHSLKDLPTELPQGFELAAVTKRENPRDVFLSVKYDSISGLPQGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A + R D+ + RG ++TR+ KL + AI+LA+AG+ RL K +++ Sbjct: 120 KVGTSSLRRQAQIKAIRPDLEIFPLRGNVDTRVRKLEQGEYDAIILAFAGLNRLGKTQLV 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 KEI++ + P+ GQGA+ IE + + + +E++ +N D + ERA L +L G C+ Sbjct: 180 KEIISEDVMCPAAGQGALGIEIRLGDTRMREILSFLNDYDARATTTAERALLNQLGGGCQ 239 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I FA K ++ I DG S++G D ++G + + + Sbjct: 240 VPIGAFAEVKDGQVHLTAICARPDGSEILRESKSG--ADPAHLGEEVGKTL 288 >gi|88861269|ref|ZP_01135901.1| porphobilinogen deaminase [Pseudoalteromonas tunicata D2] gi|88816750|gb|EAR26573.1| porphobilinogen deaminase [Pseudoalteromonas tunicata D2] Length = 312 Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 106/288 (36%), Positives = 165/288 (57%), Gaps = 2/288 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LAL A ++ L ++H P + ++P+ST+GD+I + L +IGGKGLF Sbjct: 8 LRIATRKSALALWQAEFVKAQL-EIHH-PGIQVELVPMSTQGDKILDTPLAKIGGKGLFV 65 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ ++ G D AVHS KD+P + +GL+++ RED RD F+S+ +++++L + Sbjct: 66 KELEQAMLEGRADIAVHSMKDVPVEFPEGLELNTICEREDPRDAFVSNRFKTIEELPQGA 125 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ + R D+ + D RG + TRL KL+ + AI+LA AG+ RL+ + I Sbjct: 126 VVGTSSLRRQCQIRALRPDLEIRDLRGNVNTRLAKLDEGQYDAIILAAAGLIRLEMPQRI 185 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + E P+ GQGA+ IE ++ ++L+ + H +T V ERA L+G C+ Sbjct: 186 ASFIEPEQSLPANGQGAVGIECRSDDITTKQLLAALEHTETRIRVLAERAMNRRLEGGCQ 245 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 I FA G + G+V A DG G DA +G + A Sbjct: 246 VPIGAFAQVSGEHITIRGLVGAIDGSEILRDQVQGLCADAEQLGVELA 293 >gi|190575960|ref|YP_001973805.1| porphobilinogen deaminase [Stenotrophomonas maltophilia K279a] gi|229846305|sp|B2FI06|HEM3_STRMK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|190013882|emb|CAQ47520.1| putative porphobilinogen deaminase [Stenotrophomonas maltophilia K279a] Length = 303 Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 107/267 (40%), Positives = 151/267 (56%), Gaps = 3/267 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL + L H P ++ ++P+ST+GD + +R+L IGGKGLF Sbjct: 4 VRIATRKSPLALWQSEHVADRLRQAH--PGLHVELVPMSTRGDEVLDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ GE DCAVHS KD+P +L + A L R D D F+S+ SL L + + Sbjct: 62 KELELAMLRGEADCAVHSLKDVPMELDPPFALPAMLTRHDPADGFVSNLYASLDALPIGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A L R D+ ++D RG + TRL KL+N AI+LA AG++RL + I Sbjct: 122 RVGTSSLRRQAQLRALRPDLELLDLRGNVNTRLAKLDNGGYDAIVLAVAGLERLGLGERI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L + P+P QGA+ +E N + L ++ T V ERA L GSC Sbjct: 182 VARLQPPQWLPAPAQGAVAVECDGGNARLMALFAPLDDAATRACVEAERAMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGK 271 +A A +G L+ G+V ASDG+ Sbjct: 242 VPVAAIAQWQGDDLHLQGLVGSASDGR 268 >gi|315634981|ref|ZP_07890262.1| hydroxymethylbilane synthase [Aggregatibacter segnis ATCC 33393] gi|315476243|gb|EFU66994.1| hydroxymethylbilane synthase [Aggregatibacter segnis ATCC 33393] Length = 346 Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 106/270 (39%), Positives = 157/270 (58%), Gaps = 2/270 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M KK +I TR SPLAL A ++ L ++ P +I ++ + TKGD I + L +IGG Sbjct: 39 MFKKTLKIATRQSPLALWQANFVKARLQQLY--PDLSIELVTMVTKGDVILDSPLAKIGG 96 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L++ E D AVHS KD+P + +GL +S RED RD F+S+T ++L + Sbjct: 97 KGLFVKELENALLNNEADIAVHSMKDVPMQFPEGLGLSVICKREDPRDAFVSNTYRTLAE 156 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+ RL Sbjct: 157 LPPGAIVGTSSLRRQCQLKALRPDLEIRSLRGNVGTRLSKLDNGDFDAIILASAGLIRLG 216 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I + +E P+ GQGA+ IE N+ + ++L+ + +T V ERA L Sbjct: 217 LADRITSFIEVEQSLPAAGQGAVGIECRTNDEQVKQLLAPLADVETTYCVLAERAMNNRL 276 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C+ I G+A + S L +V + DG Sbjct: 277 QGGCQVPIGGYAVLRESMLNLRALVGSVDG 306 >gi|269798482|ref|YP_003312382.1| porphobilinogen deaminase [Veillonella parvula DSM 2008] gi|282849932|ref|ZP_06259315.1| hydroxymethylbilane synthase [Veillonella parvula ATCC 17745] gi|269095111|gb|ACZ25102.1| porphobilinogen deaminase [Veillonella parvula DSM 2008] gi|282580369|gb|EFB85769.1| hydroxymethylbilane synthase [Veillonella parvula ATCC 17745] Length = 312 Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 107/301 (35%), Positives = 169/301 (56%), Gaps = 2/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + L ++ P + ++ +TKGDRI + L ++GGKGLFT Sbjct: 5 IRIGTRKSALALWQAEHISAELQRLY--PNITVELVHFNTKGDRILEKPLAQVGGKGLFT 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E+E+ + +G+ID AVHS KDMPT+L +GL + A RE D +S ++L L + Sbjct: 63 AELEEAMHAGDIDIAVHSLKDMPTELPEGLTLGAISAREVPYDALVSPVYKTLDKLPQGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A LL R D+ V RG ++TRL+K+ K ++LA AG+KRL E I Sbjct: 123 RVGTSSLRRQAQLLHVRPDLKVEVIRGNVQTRLSKIETEKLDGVILAQAGLKRLGLEDQI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ ++ P+ GQGA+ IE ++ + +++ IN E T +V ER+FL +L+G C+ Sbjct: 183 TQVFKADEMIPAVGQGALAIECRADDTEMLDMLDPINDEATRYAVEGERSFLRQLNGGCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + L ++ + DGK +E +G +G++ A+ + K + Sbjct: 243 VPMGVHGTINKGQLTLKAMIASLDGKTVYEGEISGPAKKGEILGKNLAKALYEEGGKRIV 302 Query: 306 N 306 + Sbjct: 303 D 303 >gi|332360583|gb|EGJ38393.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1056] Length = 306 Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 112/308 (36%), Positives = 168/308 (54%), Gaps = 12/308 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKAIH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q+L +L Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLANLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KR L Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ + L P+ QGA+ +E + + + L+ + E T V ERA LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLATVQDEKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA FA G ++ DG+ VS G + A Q +R + Sbjct: 240 MNADCTFPIAAFAQKNGQNYQLEAMLAKEDGQCVF-VSLQGQDGQQL-----AEQAVRQL 293 Query: 300 SNKNVFNF 307 ++K Sbjct: 294 ADKGAVGM 301 >gi|331018514|gb|EGH98570.1| porphobilinogen deaminase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 313 Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 106/296 (35%), Positives = 166/296 (56%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + +AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYNAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT + ER+ L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRLIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IA +A +G ++ G+V G++ + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVQVAEAL 294 >gi|326796191|ref|YP_004314011.1| porphobilinogen deaminase [Marinomonas mediterranea MMB-1] gi|326546955|gb|ADZ92175.1| Porphobilinogen deaminase [Marinomonas mediterranea MMB-1] Length = 308 Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 108/269 (40%), Positives = 157/269 (58%), Gaps = 2/269 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR S LAL A + L ++ P + ++ ++TKGD+I + L++IGGKG Sbjct: 2 KDKIVIATRESKLALWQANTVKKQLETLY--PNLTVELLGMTTKGDQILDSPLSKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ G D AVHS KD+P KGL ++ RED D F+S+ SL +L Sbjct: 60 LFVKELESALLDGRADIAVHSMKDVPMAFPKGLGLAVICEREDPSDAFVSNKYSSLDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SV+GTSSLRR + + R D+ + RG + TRL KL+NN+ AI+LA AG+ RL+ E Sbjct: 120 KGSVLGTSSLRRACQIQQHRPDLKIESLRGNVGTRLGKLDNNEYDAIILATAGLIRLELE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 IK L+ P+ GQGA+ IE N+ EL+ + H+DT+ V ERA L+G Sbjct: 180 DRIKSRLSDTYCLPAGGQGAMGIECRDNDKDILELLAPLQHQDTYYRVTAERAVNKRLNG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 C++ IA FA ++ G+V ++DG+ Sbjct: 240 GCQAPIACFATLSDGEIWLRGLVGSTDGQ 268 >gi|24211767|sp|Q9CK24|HEM3_PASMU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 309 Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 109/296 (36%), Positives = 164/296 (55%), Gaps = 3/296 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K RI TR SPLAL A ++ L +H + ++P+ TKGD I + L +IGG Sbjct: 2 MTRKSLRIATRQSPLALWQANYVKACLEKIHA--GLVVELVPMVTKGDVILDTPLAKIGG 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ GE D AVHS KD+P + GL +S RED RD F+S++ ++L + Sbjct: 60 KGLFVKELEQALLKGEADIAVHSMKDVPMQFPAGLMLSTICQREDPRDAFVSNSYRTLME 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L + R D+ + RG + TRL KL+N AI+LA AG+ RL Sbjct: 120 LPAGAVVGTSSLRRQCQLKQLRPDLHIHSLRGNVGTRLAKLDNGDYDAIILAAAGLIRLG 179 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +++ I ++++ P+ GQGA+ IE + + L+ + +T V ERA L Sbjct: 180 QQQRITSLIDVTQCLPAVGQGAVGIECR-QEAEIELLLAPLADPETTACVLAERAMNRHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 G C+ IAG+A + L+ +V DG DA +G A+ + Sbjct: 239 QGGCQVPIAGYAIIEEGQLFLRALVGEVDGSSILRAEGRSAVADAETLGIQVAEKL 294 >gi|212633296|ref|YP_002309821.1| porphobilinogen deaminase [Shewanella piezotolerans WP3] gi|212554780|gb|ACJ27234.1| Porphobilinogen deaminase [Shewanella piezotolerans WP3] Length = 294 Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 101/270 (37%), Positives = 153/270 (56%) Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96 + ++P+STKGD I + L ++GGKGLF +E+E ++ D AVHS KD+P +GL Sbjct: 19 TVELLPMSTKGDIILDTPLAKVGGKGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLG 78 Query: 97 ISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIET 156 + RED RD F+S+ S+ +L +V+GTSSLRR+ + R D+ + D RG + T Sbjct: 79 LEVICEREDPRDAFVSNNFSSINELPQGAVVGTSSLRRQCQIRAARPDLQIKDLRGNVGT 138 Query: 157 RLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE 216 RL KL+ AI+LA AG+KRLK E+ I ++ ED P+ GQGA+ IE ++ + + Sbjct: 139 RLAKLDAGNYDAIILAAAGLKRLKLEERITSFISAEDSLPANGQGAVGIECRTDDARVKA 198 Query: 217 LVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV 276 L+ + H +T V ERA L+G C+ I +A G TL G+V DG E Sbjct: 199 LLAPLEHLETRQRVIAERAMNTRLEGGCQVPIGAYAEIDGDTLSLRGLVGNPDGSQVIEA 258 Query: 277 SRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 + +GN+ DA +G A+ + K + + Sbjct: 259 ATSGNKNDAEQLGVALAEELLSKGAKTILD 288 >gi|15603677|ref|NP_246751.1| porphobilinogen deaminase [Pasteurella multocida subsp. multocida str. Pm70] gi|12722234|gb|AAK03896.1| Pbg [Pasteurella multocida subsp. multocida str. Pm70] Length = 312 Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 109/296 (36%), Positives = 164/296 (55%), Gaps = 3/296 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K RI TR SPLAL A ++ L +H + ++P+ TKGD I + L +IGG Sbjct: 5 MTRKSLRIATRQSPLALWQANYVKACLEKIHA--GLVVELVPMVTKGDVILDTPLAKIGG 62 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ GE D AVHS KD+P + GL +S RED RD F+S++ ++L + Sbjct: 63 KGLFVKELEQALLKGEADIAVHSMKDVPMQFPAGLMLSTICQREDPRDAFVSNSYRTLME 122 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L + R D+ + RG + TRL KL+N AI+LA AG+ RL Sbjct: 123 LPAGAVVGTSSLRRQCQLKQLRPDLHIHSLRGNVGTRLAKLDNGDYDAIILAAAGLIRLG 182 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +++ I ++++ P+ GQGA+ IE + + L+ + +T V ERA L Sbjct: 183 QQQRITSLIDVTQCLPAVGQGAVGIECR-QEAEIELLLAPLADPETTACVLAERAMNRHL 241 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 G C+ IAG+A + L+ +V DG DA +G A+ + Sbjct: 242 QGGCQVPIAGYAIIEEGQLFLRALVGEVDGSSILRAEGRSAVADAETLGIQVAEKL 297 >gi|317498182|ref|ZP_07956483.1| porphobilinogen deaminase [Lachnospiraceae bacterium 5_1_63FAA] gi|316894537|gb|EFV16718.1| porphobilinogen deaminase [Lachnospiraceae bacterium 5_1_63FAA] Length = 312 Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 114/303 (37%), Positives = 163/303 (53%), Gaps = 5/303 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 + IG+R S LAL + L + P H I + TKGD+I N+ L +IGGKGLF Sbjct: 3 YIIGSRGSRLALIQTKYVQEKLAKAY--PEHTFEIQIIKTKGDKIQNKPLDKIGGKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+K+ISGEI VHS KDMP+ KGL + RED RDV I TA+ L +L + Sbjct: 61 KEIEEKIISGEIHMGVHSMKDMPSTPAKGLVFTKVWKREDPRDVLILRTAKHLSELREGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VI T S RR LL+ R D+ +I+ RG ++TRL K+ + I+LA AG+KRL E VI Sbjct: 121 VIATGSKRRAFQLLKLRPDLQIINIRGNVDTRLRKMEEQQLDGIVLAAAGLKRLGMEDVI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L ED +P QGA+ +E + + Q+++ V E+T + V ER FL ++ GSC Sbjct: 181 TQYLAPEDMISAPAQGALALEVREDQKELQKMLDVFCDEETMNEVCAERNFLEQMGGSCH 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN-V 304 + Y + DG G C I + + A + I+ + +N + Sbjct: 241 TPAGARCQKTDQGYELYAMFGNEDGSKQAYTKVYGT-CPEI-LAQTAVKNIKKTAGRNRI 298 Query: 305 FNF 307 FN+ Sbjct: 299 FNW 301 >gi|313633107|gb|EFS00005.1| porphobilinogen deaminase [Listeria seeligeri FSL N1-067] Length = 309 Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 116/297 (39%), Positives = 168/297 (56%), Gaps = 7/297 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSGWVIARLKENY--PEIDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L G ID AVHS KD+P+ + +GL I A RE D F+ +T S DL Sbjct: 60 LFVSEVEQALSDGAIDFAVHSMKDVPSSIKEGLTIGAIPKRESALDCFVFNTVGSFHDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179 +VIGTSSLRR A +LR R D + RG I+TRL KL++ AI+LA AG+ R L Sbjct: 120 TAAVIGTSSLRRAAQILRQRPDFVIKPIRGNIDTRLQKLHDENFDAIILAKAGLSRMGWL 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + E ++ E P+ GQGA+ IE N+ + +++ I+HE+T V ER FL + Sbjct: 180 ENTTLKLEDISPELCLPAVGQGALAIECRENDKQICDMLASIHHEETGICVEAERVFLKK 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L+G C+ IAGFA + F G+V +DG R G + + IG A+ + Sbjct: 240 LNGGCEIPIAGFATKTAGQIKFKGLVGNADGSTILSAERTGE--NPMTIGNQVAEAL 294 >gi|257485539|ref|ZP_05639580.1| porphobilinogen deaminase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331011831|gb|EGH91887.1| porphobilinogen deaminase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 313 Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 107/296 (36%), Positives = 164/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL + Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IA +A +G ++ G+V G + + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPAGSVLLHAEARAPQTSAQALGVQVAEAL 294 >gi|66043333|ref|YP_233174.1| porphobilinogen deaminase [Pseudomonas syringae pv. syringae B728a] gi|289677629|ref|ZP_06498519.1| porphobilinogen deaminase [Pseudomonas syringae pv. syringae FF5] gi|302187597|ref|ZP_07264270.1| porphobilinogen deaminase [Pseudomonas syringae pv. syringae 642] gi|75504025|sp|Q500N6|HEM3_PSEU2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|63254040|gb|AAY35136.1| Porphobilinogen deaminase [Pseudomonas syringae pv. syringae B728a] gi|330901069|gb|EGH32488.1| porphobilinogen deaminase [Pseudomonas syringae pv. japonica str. M301072PT] gi|330952274|gb|EGH52534.1| porphobilinogen deaminase [Pseudomonas syringae Cit 7] gi|330970393|gb|EGH70459.1| porphobilinogen deaminase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 313 Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 107/296 (36%), Positives = 163/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IA +A +G ++ G+V G + + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGSVLLHADARAPQTSAQALGVQVAEAL 294 >gi|289625848|ref|ZP_06458802.1| porphobilinogen deaminase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646420|ref|ZP_06477763.1| porphobilinogen deaminase [Pseudomonas syringae pv. aesculi str. 2250] gi|298484668|ref|ZP_07002771.1| Porphobilinogen deaminase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160808|gb|EFI01826.1| Porphobilinogen deaminase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320326724|gb|EFW82769.1| porphobilinogen deaminase [Pseudomonas syringae pv. glycinea str. B076] gi|320331302|gb|EFW87245.1| porphobilinogen deaminase [Pseudomonas syringae pv. glycinea str. race 4] gi|330867941|gb|EGH02650.1| porphobilinogen deaminase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330881670|gb|EGH15819.1| porphobilinogen deaminase [Pseudomonas syringae pv. glycinea str. race 4] Length = 313 Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 107/296 (36%), Positives = 164/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL + Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IA +A +G ++ G+V G + + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPAGSVLLHAEARAPQTSAQALGVQVAEAL 294 >gi|254490211|ref|ZP_05103401.1| porphobilinogen deaminase [Methylophaga thiooxidans DMS010] gi|224464558|gb|EEF80817.1| porphobilinogen deaminase [Methylophaga thiooxydans DMS010] Length = 309 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 107/296 (36%), Positives = 164/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K+ RI TR SPLA+ A + SL+ +H P + ++ + T+GD I + L ++GG Sbjct: 1 MSKRTVRIATRNSPLAVWQAEFVKDSLLALH--PDLTVELVKMKTQGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P + +GL + RED D F+S+ Q++ D Sbjct: 59 KGLFVKELEQGMLDGRADIAVHSMKDVPVEFPEGLHLPVICKREDPHDAFVSNHYQTIDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+ R D+ V+ RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPHGARLGTSSLRRECQARTHRPDLEVLPLRGNVNTRLRKLDEGQFDAIILAMAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L E P+ GQGA+ IET +++ + L+ ++ T + ERA L Sbjct: 179 FDDRIRSALTPEQSLPAIGQGALGIETRIDDDEMNALIAPLHCPQTAIVLTAERALNRRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 G C+ IAG+A +G ++ G+V DG G DA +G A+ + Sbjct: 239 SGGCQVPIAGYAMLEGDEVWLRGLVGRPDGTNTLYADVRGAAKDADKLGVQIAETL 294 >gi|303247619|ref|ZP_07333890.1| porphobilinogen deaminase [Desulfovibrio fructosovorans JJ] gi|302491099|gb|EFL50993.1| porphobilinogen deaminase [Desulfovibrio fructosovorans JJ] Length = 310 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 109/300 (36%), Positives = 166/300 (55%), Gaps = 4/300 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A + L + H P + ++P+ TKGDRI + L ++GGKGLF +E Sbjct: 7 IATRGSKLALWQANHVAARLKEAH--PGLAVDLLPIKTKGDRILDVPLAKVGGKGLFVKE 64 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ L+ G D AVHS KD+P + GL + RED D+ +S L L + + Sbjct: 65 IEEALLDGRADLAVHSMKDVPAEQPAGLVVGITPKREDPCDMLLSVAYDGLDALPEGAKV 124 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRRKA L R D++++D RG ++TR+ KL + AI++A AG+ RL E Sbjct: 125 GTSSLRRKAQLTALRPDLAIVDLRGNLDTRVGKLTDGLFDAIVVARAGLNRLGLSAPKSE 184 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 L F P+ QGA+ IE ++ + ++ +H ++ D+V ERAFL L+G C+ Sbjct: 185 RLCPPRFLPAAAQGALGIEYRFDDRETAAMLAFFDHPESRDAVAAERAFLGRLEGGCQVP 244 Query: 248 IAGFAYCKGSTLYFYGIVLASD-GKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 IA A G+ + G+V D G+ F +V+ G R DA+ +G+ A + + + + + Sbjct: 245 IAAHAVIDGNLISIDGLVADPDTGRTFRDVA-TGKRDDAVELGKKLADSVLAMGARAILD 303 >gi|70733286|ref|YP_263060.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf-5] gi|123734674|sp|Q4K3X3|HEM3_PSEF5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|68347585|gb|AAY95191.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf-5] Length = 313 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 110/296 (37%), Positives = 165/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L + H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLQEAH--PGLVVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ + D AVHS KD+P +GL + RED RD F+S+T SL + Sbjct: 59 KGLFVKELETALLENQADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPEGSVVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++H DT V ERA L Sbjct: 179 FEDRISSSISVDDSLPAGGQGAVGIECRSADIEIHALLAPLHHADTASRVTAERALNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IA +A +G ++ G+V G + G R A +G A + Sbjct: 239 NGGCQVPIACYAVLEGEQIWLRGLVGEPSGGLLLSAEARGPRASAAELGVQVADAL 294 >gi|330976469|gb|EGH76521.1| porphobilinogen deaminase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 313 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 107/296 (36%), Positives = 163/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLIVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IA +A +G ++ G+V G + + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGSVLLHADARAPQTSAQALGVQVAEAL 294 >gi|322514003|ref|ZP_08067077.1| hydroxymethylbilane synthase [Actinobacillus ureae ATCC 25976] gi|322120153|gb|EFX92114.1| hydroxymethylbilane synthase [Actinobacillus ureae ATCC 25976] Length = 309 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 111/294 (37%), Positives = 159/294 (54%), Gaps = 2/294 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR SPLAL A + L + P + ++ + TKGD I + L +IGGKG Sbjct: 2 KDILRIATRQSPLALWQANFVKKELE--KRFPELQVELVTMVTKGDIILDTPLAKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L Sbjct: 60 LFVKELELALLEKRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 120 AGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYEAIILASAGLIRLGMP 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ + +E P+ GQGA+ IET VN+ + + +NH T V ERA L G Sbjct: 180 ERIRSFIAVEQSLPAAGQGAVGIETRVNDERVLNYLASLNHNPTACCVMAERAMNTRLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ I GFA G+ + +V A DG S + DA +G A+ + Sbjct: 240 GCQVPIGGFATLNGNEITLNALVGALDGSTIIRASGVADIEDAEQLGISVAEQL 293 >gi|194017264|ref|ZP_03055876.1| porphobilinogen deaminase [Bacillus pumilus ATCC 7061] gi|194011132|gb|EDW20702.1| porphobilinogen deaminase [Bacillus pumilus ATCC 7061] Length = 311 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 111/286 (38%), Positives = 172/286 (60%), Gaps = 4/286 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + ++G+R S LA+ L +++ P ++ I + TKGD+I + TL+++GGKGL Sbjct: 2 RTIKVGSRRSKLAITQTKWVIQKLSELN--PSYSFEIKEIVTKGDQILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ +++ +ID AVHS KDMP L +GL I RED+RD IS L +L Sbjct: 60 FVKEIEQAMLNHDIDMAVHSMKDMPAALPEGLVIGCIPEREDVRDALISKDHLRLHELPK 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR A LL+ R D+++ RG I+TRL KL N + AI+LA AG+ R+ K Sbjct: 120 GAIVGTSSLRRSAQLLQERPDLNIKWIRGNIDTRLEKLKNEEYDAIILAAAGLSRMGWSK 179 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L+ E P+ GQGA+ IE ++ + +L+ +E T +V ERAFL ++DG Sbjct: 180 EVVSEFLSPETCLPAVGQGALSIECRGDDEELLQLLAQFTNEYTKKTVLAERAFLKQMDG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 SC+ IAG+A + + G+V ++DG + +G+ +AI Sbjct: 240 SCQVPIAGYATINERDEIELTGLVASADGHTIIRETVSGSDPEAIG 285 >gi|210621716|ref|ZP_03292765.1| hypothetical protein CLOHIR_00710 [Clostridium hiranonis DSM 13275] gi|210154598|gb|EEA85604.1| hypothetical protein CLOHIR_00710 [Clostridium hiranonis DSM 13275] Length = 299 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 107/292 (36%), Positives = 164/292 (56%), Gaps = 3/292 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LAL L + K P + + TKGD+I + +L +IG KGLF Sbjct: 3 IRVGTRGSNLALIQTNWAIDRLKE--KFPEVEFEVKIIKTKGDKILHLSLDKIGDKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLALH 124 +EIE +L+ GEID AVHS KDMP ++++GL+ +A RED RDV I S +L + Sbjct: 61 KEIESQLLEGEIDLAVHSMKDMPAEVVEGLKFAAVPKREDPRDVIILREGLNSFDELPIG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGT S RRK LLR R D++++ RG IETR++K+ + I+LA +G+ R E+ Sbjct: 121 ATIGTGSKRRKYQLLRKRPDLNIVPIRGNIETRISKIESENLDGIVLAASGVIRADLEEK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L ++ P+P QGA+ +E N+ + ++++ I E + + ER++LA +DGSC Sbjct: 181 ITEFLPVDLMIPAPAQGALALEIRENDEELEKMIDAIKDEISQIQTDAERSYLAGIDGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + G L GI DG+ S G+R + +G + A+ + Sbjct: 241 HIPMGAYCEVDGEKLTLTGIFGDEDGEKITVASLEGDRDNPKELGSNLAKLV 292 >gi|34101365|gb|AAQ57734.1| porphobilinogen deaminase [Chromobacterium violaceum ATCC 12472] Length = 295 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 105/263 (39%), Positives = 152/263 (57%), Gaps = 1/263 (0%) Query: 35 PH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 PH + I+ ++T+GD+I ++TL++IGGKGLF +E+E+ L+ G D AVHS KD+P L Sbjct: 16 PHLTVEILGMTTQGDQILDKTLSKIGGKGLFVKELEQALMDGRADLAVHSLKDVPMTLPD 75 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 G ++A RED RD F+S+ Q L +L SV+GTSSLRR+A L ++V RG Sbjct: 76 GFALAAVCEREDPRDAFVSNRYQHLSELPAGSVVGTSSLRREAQLRARFPQLAVKPLRGN 135 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 ++TRL KL++ + AI+LA AG+KRL + I+ L + P+ GQGA+ IE + Sbjct: 136 VQTRLKKLDDGEFDAIILAAAGLKRLGLAERIQGELAPSESLPAAGQGALGIEIRADRAD 195 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 L+ +NH DT ERA EL GSC+ + FA TL G+V DG + Sbjct: 196 LSALLAPLNHPDTRACTAAERALAKELGGSCQVPLGAFATLADGTLTLGGLVAHPDGSVV 255 Query: 274 HEVSRNGNRCDAINIGRDAAQYI 296 S +G A +GR A+ + Sbjct: 256 LTASASGPADYADALGRAVAKKL 278 >gi|16079867|ref|NP_390693.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str. 168] gi|238054381|sp|P16616|HEM3_BACSU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|143037|gb|AAA22512.1| porphobilinogen deaminase [Bacillus subtilis] gi|2635280|emb|CAB14775.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus subtilis subsp. subtilis str. 168] Length = 314 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 118/302 (39%), Positives = 166/302 (54%), Gaps = 11/302 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGKGL Sbjct: 3 RTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFAFEIKEIVTKGDRIVDVTLSKVGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L++ EID AVHS KDMP L +GL I RED RD IS L ++ Sbjct: 61 FVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEMKK 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KE 182 +VIGTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+ K+ Sbjct: 121 GAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKQ 180 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++G Sbjct: 181 DVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAMEG 240 Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGN-------RCDAINIGRDAAQ 294 C+ IAG++ G + G+V + DGKI + + GN RC A+ + A Sbjct: 241 GCQVPIAGYSVLNGQDEIEMTGLVASPDGKIIFKETVTGNDPEEVGKRCAALMADKGAKD 300 Query: 295 YI 296 I Sbjct: 301 LI 302 >gi|71738146|ref|YP_272379.1| porphobilinogen deaminase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558699|gb|AAZ37910.1| porphobilinogen deaminase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 328 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 107/296 (36%), Positives = 164/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 16 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL + Sbjct: 74 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 133 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 134 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 193 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 194 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 253 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IA +A +G ++ G+V G + + A +G A+ + Sbjct: 254 NGGCQVPIACYAVLEGDDVWLRGLVGDPAGSVLLHAEARAPQTSAQALGVQVAEAL 309 >gi|157693217|ref|YP_001487679.1| porphobilinogen deaminase [Bacillus pumilus SAFR-032] gi|167008811|sp|A8FFV2|HEM3_BACP2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157681975|gb|ABV63119.1| hydroxymethylbilane synthase [Bacillus pumilus SAFR-032] Length = 311 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 111/286 (38%), Positives = 171/286 (59%), Gaps = 4/286 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + ++G+R S LA+ L +++ P ++ I + TKGD+I + TL+++GGKGL Sbjct: 2 RTIKVGSRRSKLAITQTKWVIQKLSELN--PSYSFEIKEIVTKGDQILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ +++ +ID AVHS KDMP L +GL I RED+RD IS L +L Sbjct: 60 FVKEIEQAMLNHDIDMAVHSMKDMPAALPEGLVIGCIPEREDVRDALISKDHLHLHELPK 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR A LL+ R D+++ RG I+TRL KL N + AI+LA AG+ R+ K Sbjct: 120 GAIVGTSSLRRSAQLLQERPDLNIKWIRGNIDTRLEKLKNEEYDAIILAAAGLSRMGWSK 179 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L+ E P+ GQGA+ IE ++ + +L+ +E T +V ERAFL ++DG Sbjct: 180 EVVSEFLSPETCLPAVGQGALSIECRGDDEELLQLLAQFTNEYTKKTVLAERAFLKQMDG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 SC+ IAG+A + + G+V ++DG + +G +AI Sbjct: 240 SCQVPIAGYATMNERDEIELTGLVASADGHTIIRETVSGTDPEAIG 285 >gi|330957337|gb|EGH57597.1| porphobilinogen deaminase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 313 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 108/296 (36%), Positives = 164/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLIVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPPGLGLFCICEREDPRDAFVSNTFDSLET 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FEDRITSSISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IA +A +G ++ G+V G + + A +G + A+ + Sbjct: 239 NGGCQVPIACYAVLEGDNVWLRGLVGDPSGSLLLHAEARAPQTAAQALGVEVAEAL 294 >gi|325294749|ref|YP_004281263.1| Porphobilinogen deaminase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065197|gb|ADY73204.1| Porphobilinogen deaminase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 311 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 111/305 (36%), Positives = 175/305 (57%), Gaps = 6/305 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL + + + K P + +I ++TKGD+I + L +IG KGLFT Sbjct: 3 IRIGTRKSKLALWQSEWVKEQIE--KKFPEVEVELIKITTKGDKILDVPLAKIGDKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE ++ GE+D AVHS KD+P+KL +GL++ A+ RED RD +S +L L + Sbjct: 61 KEIEDAMLKGEVDIAVHSLKDVPSKLPEGLKLIAFSDREDPRDALLSCGKYTLDTLPEGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRRKA L R D+ + D RG ++TR+ KL + AI+LA AG+KRL E I Sbjct: 121 VVGTSSLRRKAQLRILRPDLEIRDLRGNVDTRIRKLKEEQYDAIILAAAGVKRLGWENEI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDGSC 244 EIL+ + PS QG + IE ++P+ + +VK IN ++ + ERAFL ++G C Sbjct: 181 DEILSSDKMIPSVSQGILGIEGREDDPEIERIVKEAINSRESEIAATVERAFLRTVEGGC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDAAQYIRFISN 301 + + +A + ++ + +G+ +++ V + N +A +G A+ + Sbjct: 241 QVPLGCYAVVVENRVHVRAFISDLNGRFYYKEEGVFKVENLEEADMVGTGVAERLLSAGG 300 Query: 302 KNVFN 306 K + + Sbjct: 301 KKILD 305 >gi|71909286|ref|YP_286873.1| porphobilinogen deaminase [Dechloromonas aromatica RCB] gi|123733070|sp|Q479S8|HEM3_DECAR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|71848907|gb|AAZ48403.1| Porphobilinogen deaminase [Dechloromonas aromatica RCB] Length = 311 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 159/290 (54%), Gaps = 2/290 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R L ++ P +VI+ ++TKGD+I +R L EIGGKGLF +E Sbjct: 9 IASRESRLAMWQAVHVRDRLSSLN--PGAEVVILGMTTKGDQILDRPLAEIGGKGLFIKE 66 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E + G+ AVHS KD+P + +G ++A RE+ RD F+S+ L DL +++ Sbjct: 67 LEVAMQEGKAHLAVHSMKDVPMVMPEGFVLAAISARENPRDAFVSNKYNGLDDLPAGAIV 126 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+++L + + RG ++TRL KL+ + AI+LA AG+ RL E IK Sbjct: 127 GTSSLRRESILRAKYPQLVIKSLRGNLDTRLKKLDAGEYDAIILAAAGLIRLGMENRIKS 186 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L E P+PGQGA+ IE ++V +N +T V ERAF L GSC+ Sbjct: 187 VLTAEQSLPAPGQGALGIELIDGAADMADVVAPLNDPETAHCVKAERAFSRALGGSCQVP 246 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + G+A L+ G V +DG+ GN D +G A +R Sbjct: 247 LGGYAIIDNGQLWLRGFVATADGQEVVSAELRGNPADDEALGLQLAAELR 296 >gi|152997593|ref|YP_001342428.1| porphobilinogen deaminase [Marinomonas sp. MWYL1] gi|150838517|gb|ABR72493.1| porphobilinogen deaminase [Marinomonas sp. MWYL1] Length = 326 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 108/287 (37%), Positives = 165/287 (57%), Gaps = 2/287 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR S LAL A ++ L ++ P + ++ ++TKGD+I + L++IGGKG Sbjct: 19 KDKIVIATRESQLALWQANNIKAQLESLY--PDMKVELLGMTTKGDQILDSPLSKIGGKG 76 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L G D AVHS KD+P +GL ++ RED D F+S+ +SL L Sbjct: 77 LFVKELENALTEGLADIAVHSMKDVPMAFPEGLGLAVICEREDPHDAFVSNKVESLDQLP 136 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR L R D+ + D RG + TRL K+++ + AI+LA AG+ RL+ Sbjct: 137 SGAIVGTSSLRRSCQLRMKRPDLIIKDLRGNVNTRLKKMDDGEYDAIILATAGLVRLEML 196 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I++ + E P+ GQGA+ IE ++ + L+ + HE+T V ERA L+G Sbjct: 197 DRIRQRIPAETSLPAGGQGAMGIECRSDDIQTINLLAPLQHEETAIRVTAERAVNERLNG 256 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 C++ IA FA + TL+ G+V + DGK E G++ DA ++G Sbjct: 257 GCQAPIACFAILENDTLWLRGLVGSPDGKTMIEGEIRGHKDDAKSLG 303 >gi|221310755|ref|ZP_03592602.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str. 168] gi|221315080|ref|ZP_03596885.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319999|ref|ZP_03601293.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str. JH642] gi|221324281|ref|ZP_03605575.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str. SMY] Length = 313 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 118/302 (39%), Positives = 166/302 (54%), Gaps = 11/302 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGKGL Sbjct: 2 RTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFAFEIKEIVTKGDRIVDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L++ EID AVHS KDMP L +GL I RED RD IS L ++ Sbjct: 60 FVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEMKK 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KE 182 +VIGTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+ K+ Sbjct: 120 GAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKQ 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++G Sbjct: 180 DVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAMEG 239 Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGN-------RCDAINIGRDAAQ 294 C+ IAG++ G + G+V + DGKI + + GN RC A+ + A Sbjct: 240 GCQVPIAGYSVLNGQDEIEMTGLVASPDGKIIFKETVTGNDPEEVGKRCAALMADKGAKD 299 Query: 295 YI 296 I Sbjct: 300 LI 301 >gi|167463591|ref|ZP_02328680.1| porphobilinogen deaminase [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383221|ref|ZP_08057032.1| porphobilinogen deaminase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152490|gb|EFX45276.1| porphobilinogen deaminase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 314 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 113/288 (39%), Positives = 165/288 (57%), Gaps = 7/288 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIV--IIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LAL + L + + I + TKGDRI + TL+++GGKGLF Sbjct: 6 VGTRQSALALTQTGQVVDELRKRCREAGLQVEFEIRKIVTKGDRILDVTLSKVGGKGLFV 65 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ +++GEID AVHS KDMP +L +GL I A R+D RD ++ SL +L + Sbjct: 66 KEIEQAMLNGEIDLAVHSMKDMPFELPEGLVIGAIPERQDPRDCILTKGYVSLDELPQGA 125 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR + LL R D+++ RG I++RL KL + AI+LA AG+ R+ E+ I Sbjct: 126 LVGTSSLRRGSQLLHARPDLTIRSVRGNIDSRLRKLESEGFDAIVLASAGLHRMGWEERI 185 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L E P+ GQGA+CIE + +L+K+I H+DT +V ERAFL L+G C+ Sbjct: 186 SGYLPPEQCLPAVGQGALCIECRGGDAFVLDLLKLIQHDDTALAVRAERAFLGRLNGGCQ 245 Query: 246 SAIAGFAYC--KGST---LYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 + FA G T L +V + DG + +R G R + + + Sbjct: 246 VPLGAFASVDHSGGTEPLLTLTAMVGSPDGSKLLKETRQGTRPEELGL 293 >gi|145300736|ref|YP_001143577.1| porphobilinogen deaminase [Aeromonas salmonicida subsp. salmonicida A449] gi|142853508|gb|ABO91829.1| porphobilinogen deaminase [Aeromonas salmonicida subsp. salmonicida A449] Length = 315 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 107/297 (36%), Positives = 166/297 (55%), Gaps = 4/297 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +I TR SPLAL A + L ++ P + ++P+ST+GD+I + L ++GG Sbjct: 7 MAARTLKIATRKSPLALWQANFVKDRLEALY--PELQVELVPMSTQGDKILDTPLAKVGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ ++ Sbjct: 65 KGLFVKELETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFSQIEA 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 125 LPQGAVVGTSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLE 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I + E P+ GQGA+ IE +++ + L+ + H +T V ERA L Sbjct: 185 MAHRITAFIEPEQSLPANGQGAVGIECRLDDHELHTLLAPLEHAETRIRVLTERAMNRAL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNGNRCDAINIGRDAAQYI 296 G C+ I +A +G ++ G+V + DG ++ H+ R G D +G AQ + Sbjct: 245 QGGCQVPIGAYALVQGDEVWLRGLVGSPDGSQVIHDEIR-GPLADGEALGHTLAQRL 300 >gi|219871198|ref|YP_002475573.1| porphobilinogen deaminase [Haemophilus parasuis SH0165] gi|219691402|gb|ACL32625.1| porphobilinogen deaminase [Haemophilus parasuis SH0165] Length = 309 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 108/294 (36%), Positives = 164/294 (55%), Gaps = 2/294 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ RI TR SPLAL A + +L + P ++ ++ + TKGD I + L +IGGKG Sbjct: 2 KEILRIATRQSPLALWQANFVKDALE--QRFPQLSVELVTMVTKGDIILDTPLAKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ +L+ L Sbjct: 60 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNHYANLEALP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+ L+ + + RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 120 AGAVVGTSSLRRQCQLMAKYPHLQIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGLS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ + +E P+ GQGA+ IET +N+ + + +NH+ T V ERA + L G Sbjct: 180 ERIRTFIPVETSLPACGQGAVGIETRLNDERVLAYLAELNHQPTAYCVQAERAMNSRLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ I GFA G + +V + DG S GN +A +G + A+ + Sbjct: 240 GCQVPIGGFATLTGDEIELNALVGSLDGSTIVRASAKGNIKEAEKLGVEVAEAL 293 >gi|308174513|ref|YP_003921218.1| porphobilinogen deaminase [Bacillus amyloliquefaciens DSM 7] gi|307607377|emb|CBI43748.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus amyloliquefaciens DSM 7] gi|328554432|gb|AEB24924.1| porphobilinogen deaminase [Bacillus amyloliquefaciens TA208] gi|328912836|gb|AEB64432.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus amyloliquefaciens LL3] Length = 313 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 115/292 (39%), Positives = 163/292 (55%), Gaps = 11/292 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + ++G+R S LA+ + L +++ P +N I + TKGDRI + TL+++GGKGL Sbjct: 2 RTIKVGSRRSKLAMTQTKWVINKLKELN--PSYNFEIQEIVTKGDRILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+ EID AVHS KDMP L +GL I RED RD IS Q L D+ Sbjct: 60 FVKEIEQALLHQEIDMAVHSMKDMPAVLPEGLVIGCIPKREDPRDALISKGHQKLDDIKE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KE 182 +IGTSSLRR A +L R D+++ RG I+TRL KL AI+LA AG+ R+ K+ Sbjct: 120 GGIIGTSSLRRSAQILAERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L + P+ GQGA+ IE ++ + +L E T +V ERAFL ++G Sbjct: 180 DVVSEFLEPDRCLPAVGQGALAIECRESDEELLKLFAQFTDEYTKRTVAAERAFLHAMEG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIF-------HEVSRNGNRCDAI 286 C+ IAG+A + G+V + DGK H+ G RC A+ Sbjct: 240 GCQVPIAGYASVNDRDEVELVGLVASPDGKTIYKETAAGHDPEEIGKRCAAM 291 >gi|167767183|ref|ZP_02439236.1| hypothetical protein CLOSS21_01702 [Clostridium sp. SS2/1] gi|167711158|gb|EDS21737.1| hypothetical protein CLOSS21_01702 [Clostridium sp. SS2/1] gi|291559492|emb|CBL38292.1| porphobilinogen deaminase [butyrate-producing bacterium SSC/2] Length = 780 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 106/265 (40%), Positives = 147/265 (55%), Gaps = 2/265 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 + IG+R S LAL + L + P H I + TKGD+I N+ L +IGGKGLF Sbjct: 3 YIIGSRGSRLALIQTKYVQEKLAKAY--PEHTFEIQIIKTKGDKIQNKPLDKIGGKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+K+ISGEI VHS KDMP+ KGL + RED RDV I TA+ L +L + Sbjct: 61 KEIEEKIISGEIHMGVHSMKDMPSTPAKGLVFTKVWKREDPRDVLILRTAKHLSELREGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VI T S RR LL+ R D+ +I+ RG ++TRL K+ + I+LA AG+KRL E VI Sbjct: 121 VIATGSKRRAFQLLKLRPDLQIINIRGNVDTRLRKMEEQQLDGIVLAAAGLKRLGMEDVI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L ED +P QGA+ +E + + Q+++ V E+T + V ER FL ++ GSC Sbjct: 181 TQYLAPEDMISAPAQGALALEVREDQKELQKMLDVFCDEETMNEVCAERNFLEQMGGSCH 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270 + Y + DG Sbjct: 241 TPAGARCQKTDQGYELYAMFGNEDG 265 >gi|146305321|ref|YP_001185786.1| porphobilinogen deaminase [Pseudomonas mendocina ymp] gi|145573522|gb|ABP83054.1| hydroxymethylbilane synthase [Pseudomonas mendocina ymp] Length = 312 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 109/293 (37%), Positives = 161/293 (54%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGGKGL Sbjct: 3 REIRIATRKSALALWQAEYVKARLEQAH--PGLLVSLVPMVSRGDKLLDAPLAKIGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL L Sbjct: 61 FVKELETALLENEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTYDSLDALPA 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL + Sbjct: 121 GSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFQD 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ ++ ED P+ GQGA+ IE + + L+ ++H +T V ERA L+G Sbjct: 181 RIRSSISAEDSLPAGGQGAVGIECRSADAEIHALLAPLHHRETALRVTAERALNKRLNGG 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ IA +A + L+ G+V DG + DA +G A+ + Sbjct: 241 CQVPIACYALLENDQLWLRGLVGQPDGGLLLRAEHRAASSDAEALGVRVAEAL 293 >gi|167855158|ref|ZP_02477929.1| porphobilinogen deaminase [Haemophilus parasuis 29755] gi|167853703|gb|EDS24946.1| porphobilinogen deaminase [Haemophilus parasuis 29755] Length = 309 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 108/294 (36%), Positives = 164/294 (55%), Gaps = 2/294 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ RI TR SPLAL A + +L + P ++ ++ + TKGD I + L +IGGKG Sbjct: 2 KEILRIATRQSPLALWQANFVKDALE--QRFPQLSVELVTMVTKGDIILDTPLAKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ +L+ L Sbjct: 60 LFVKELELALLKNRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNHYANLEALP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+ L+ + + RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 120 AGAVVGTSSLRRQCQLMAKYPHLQIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGLS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ + +E P+ GQGA+ IET +N+ + + +NH+ T V ERA + L G Sbjct: 180 ERIRTFIPVETSLPACGQGAVGIETRLNDERVLAYLAELNHQPTAYCVQAERAMNSRLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ I GFA G + +V + DG S GN +A +G + A+ + Sbjct: 240 GCQVPIGGFATLTGDEIELNALVGSLDGSTIVRASAKGNIKEAEKLGVEVAEAL 293 >gi|89074445|ref|ZP_01160922.1| porphobilinogen deaminase [Photobacterium sp. SKA34] gi|89049733|gb|EAR55283.1| porphobilinogen deaminase [Photobacterium sp. SKA34] Length = 310 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 100/270 (37%), Positives = 157/270 (58%), Gaps = 2/270 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ + H P ++ ++P+ TKGD I + L ++GG Sbjct: 1 MSNQLIRIATRKSPLAMWQAEFVKAEIEQAH--PGISVELVPMITKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ ++ + Sbjct: 59 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNKYNNIDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ V D RG + TRL K++ + AI+LA AG+KRLK Sbjct: 119 LPQGAIVGTSSLRRQCQLRAQRPDLIVNDLRGNVNTRLRKMDEGQYDAIILACAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE +++ + ++L+ ++ + T V CERA L Sbjct: 179 MEDRIRSEIAPEVSLPAVGQGAVGIECRLDDTRVRQLLTALSDQATTTRVLCERAMNNHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C+ I +A +G ++ +V DG Sbjct: 239 QGGCQVPIGSYAELEGDQVWLRALVGEPDG 268 >gi|311069308|ref|YP_003974231.1| porphobilinogen deaminase [Bacillus atrophaeus 1942] gi|310869825|gb|ADP33300.1| porphobilinogen deaminase [Bacillus atrophaeus 1942] Length = 313 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 122/302 (40%), Positives = 168/302 (55%), Gaps = 11/302 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + ++G+R S LA+ L ++ P + I + TKGDRI + TL+++GGKGL Sbjct: 2 RTIKVGSRRSKLAMTQTKWVIKKLEEID--PSYTFEIKEIVTKGDRILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L++ +ID AVHS KDMP L +GL I RED RD IS Q L D+ Sbjct: 60 FVKEIEQALLNEDIDMAVHSMKDMPASLPEGLTIGCIPKREDPRDALISKRHQKLSDIKE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KE 182 VIGTSSLRR A LL R D+++ RG I+TRL+KL AI+LA AG+ R+ K+ Sbjct: 120 GGVIGTSSLRRSAQLLVERPDLTIKWIRGNIDTRLHKLETEDYDAIILAAAGLSRMGWKD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++G Sbjct: 180 DVVTEFLEPERCLPAVGQGALAIECRESDEELLRLFSQFTDEYTKRTVLAERAFLNAMEG 239 Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGK-IFHE-VSRN-----GNRCDAINIGRDAAQ 294 C+ IAG+A + G+V + DGK IF E V+ N G RC A+ + A Sbjct: 240 GCQVPIAGYATINDQDEVQLTGLVASPDGKTIFKEKVAGNDPEEIGKRCAALMSDKGAKA 299 Query: 295 YI 296 I Sbjct: 300 LI 301 >gi|42520403|ref|NP_966318.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410142|gb|AAS14252.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila melanogaster] Length = 292 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 114/291 (39%), Positives = 161/291 (55%), Gaps = 6/291 (2%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +IGTR S LA+A A E + L+D P +I I+ + T GD+ N L EIGGKGLF + Sbjct: 4 KIGTRGSKLAVAQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFIK 61 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE +L+ ID AVHS KDMP GL I L R D FISH SL+ L + Sbjct: 62 EIETELLENNIDMAVHSLKDMPAFFSGGLTIPCVLERLSSCDAFISHKHNSLESLPQQAT 121 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 I TSS+RRK LL R D++++ RG + TR L N I+LA AG+ RL+K +I Sbjct: 122 IATSSIRRKVQLLNVRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLIT 178 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E+L + + GQGA+CI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC + Sbjct: 179 EVLPPKVMLSAVGQGAVCIQCRRNDVKIIDLLEKINNNMSFIGVKSERSFMKTVNGSCFT 238 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +A A + +LAS GK + R DA +G DA ++ Sbjct: 239 PLAALAEYVSENMLHLRCMLAS-GKNIYFTERTSFIEDAEKMGMDAGLELK 288 >gi|99034622|ref|ZP_01314577.1| hypothetical protein Wendoof_01000608 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 302 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 114/291 (39%), Positives = 161/291 (55%), Gaps = 6/291 (2%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +IGTR S LA+A A E + L+D P +I I+ + T GD+ N L EIGGKGLF + Sbjct: 14 KIGTRGSKLAVAQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFIK 71 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE +L+ ID AVHS KDMP GL I L R D FISH SL+ L + Sbjct: 72 EIETELLENNIDMAVHSLKDMPAFFSGGLTIPCVLERLSSCDAFISHKHNSLESLPQQAT 131 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 I TSS+RRK LL R D++++ RG + TR L N I+LA AG+ RL+K +I Sbjct: 132 IATSSIRRKVQLLNVRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLIT 188 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E+L + + GQGA+CI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC + Sbjct: 189 EVLPPKVMLSAVGQGAVCIQCRRNDVKIIDLLEKINNNMSFIGVKSERSFMKTVNGSCFT 248 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +A A + +LAS GK + R DA +G DA ++ Sbjct: 249 PLAALAEYVSENMLHLRCMLAS-GKNIYFTERTSFIEDAEKMGMDAGLELK 298 >gi|327473567|gb|EGF18987.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK408] Length = 306 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 111/308 (36%), Positives = 167/308 (54%), Gaps = 12/308 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKKLH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q+L DL Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+ R L Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLNRLGWL 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ + L P+ QGA+ +E + + ++L+ + E T V ER LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDEKTAAEVAVERVVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA FA G ++ DG+ VS G + A Q +R + Sbjct: 240 MNADCTFPIAAFAQKNGQDYQLEAMLAKEDGQCVF-VSLKGQDGQQL-----AEQAVRQL 293 Query: 300 SNKNVFNF 307 ++K Sbjct: 294 ADKGAVGM 301 >gi|330501254|ref|YP_004378123.1| porphobilinogen deaminase [Pseudomonas mendocina NK-01] gi|328915540|gb|AEB56371.1| porphobilinogen deaminase [Pseudomonas mendocina NK-01] Length = 312 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 109/293 (37%), Positives = 159/293 (54%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGGKGL Sbjct: 3 REIRIATRKSALALWQAEYVKARLEQAH--PGLKVSLVPMVSRGDKLLDAPLAKIGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL L Sbjct: 61 FVKELETALLENEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTYDSLDALPA 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 121 GSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFAD 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ ++ ED P+ GQGA+ IE + L+ ++H +T V ERA L+G Sbjct: 181 RIRSSISAEDSLPAGGQGAVGIECRSADSDVHALLAPLHHRETALRVTAERALNKHLNGG 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ IA +A + L+ G+V DG + DA +G A+ + Sbjct: 241 CQVPIACYALLEDDQLWLRGLVGQPDGGLLLRAEERAASGDAEALGVRVAEAL 293 >gi|12655813|gb|AAK00605.1|AF221100_2 porphobilinogen deaminase [Selenomonas ruminantium subsp. ruminantium] Length = 313 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 113/307 (36%), Positives = 171/307 (55%), Gaps = 3/307 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+K IGTR S LAL A + L + + P + + ++TKGD+I + L +IGG Sbjct: 1 MKKDTIVIGTRSSKLALWQAEYVKGRLEEEY--PGLKVELKLMTTKGDKILDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E ++SG ID AVHS KDMPT+L +GL ++A R D D +S ++ Sbjct: 59 KGLFTKELEMDMLSGGIDLAVHSLKDMPTELPEGLTLAAITKRFDPGDAVVSPKFKTFAA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRRKA LL R D+++ D RG + TRL KL + AI+LA AG+KRL Sbjct: 119 LPCGAKVGTSSLRRKAQLLHARPDLNICDLRGNVNTRLAKLESENFDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I E+L + P+ GQGA+ IET ++ +E++ +N E T ERAFL + Sbjct: 179 FGERITEVLPRDMVLPAVGQGALAIETREDDADMREMLAFLNDEATVHCAKAERAFLGRV 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLAS-DGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ + +A + V+AS DG+ + +G +A +G A+ + Sbjct: 239 EGGCQVPVGVYAVPAANDEIQVEAVIASLDGQRLYRDKLSGKASEAEKLGVTLAEKLLAA 298 Query: 300 SNKNVFN 306 + + Sbjct: 299 GGQKILQ 305 >gi|52424331|ref|YP_087468.1| porphobilinogen deaminase [Mannheimia succiniciproducens MBEL55E] gi|61213369|sp|Q65VX7|HEM3_MANSM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|52306383|gb|AAU36883.1| HemC protein [Mannheimia succiniciproducens MBEL55E] Length = 310 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 105/268 (39%), Positives = 154/268 (57%), Gaps = 2/268 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +I TR SPLAL A + L ++ P + ++ + TKGD I + L +IGGKG Sbjct: 4 KNHLKIATRQSPLALWQANYVKDRLTALY--PDLQVELVTMVTKGDVILDTPLAKIGGKG 61 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L++ E D AVHS KD+P + +GL +S RED RD F+S+ +SL +L Sbjct: 62 LFVKELEHALLNHEADIAVHSMKDVPMEFPQGLGLSVICKREDPRDAFVSNKYRSLAELP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+ RL Sbjct: 122 QGAIVGTSSLRRQCQLKSLRPDLDIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRLGMA 181 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I + + P+ GQGA+ IE V++ Q L+ + H++T V ERA L G Sbjct: 182 ERIASFIETDISLPAAGQGAVGIECRVDDELVQSLLAPLAHQETTICVLAERAMNNRLQG 241 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270 C+ I GFA K ++ +V A+DG Sbjct: 242 GCQVPIGGFAQVKNGEVFLRALVGATDG 269 >gi|327489115|gb|EGF20910.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1058] Length = 306 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 111/308 (36%), Positives = 167/308 (54%), Gaps = 12/308 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKKLH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L +L Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFLQAGQTLANLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KR L Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ + L P+ QGA+ +E + + + L+ + E T V ERA LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA A KG ++ DG+ VS G + A Q +R + Sbjct: 240 MNADCTFPIAALAQKKGQDYQLEAMLAKEDGQCVF-VSLQGQDGQEL-----AEQAVRQL 293 Query: 300 SNKNVFNF 307 ++K Sbjct: 294 ADKGAVGM 301 >gi|309775730|ref|ZP_07670726.1| hydroxymethylbilane synthase [Erysipelotrichaceae bacterium 3_1_53] gi|308916493|gb|EFP62237.1| hydroxymethylbilane synthase [Erysipelotrichaceae bacterium 3_1_53] Length = 299 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 111/292 (38%), Positives = 156/292 (53%), Gaps = 2/292 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LALA E R L + + P H + +STKGDR + L ++ KG+F Sbjct: 3 IRMGTRGSALALAQCKEVRDRLQEAY--PQHTFELCVISTKGDRNQHVALDQMKDKGIFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE++L+ G ID AVHS KDMP+ L L + L RED RDV + TA +L+ L H+ Sbjct: 61 KEIEQQLLEGTIDLAVHSMKDMPSTLDARLCFTKTLLREDARDVLVLRTAPTLEQLPPHA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 I T S RR LLR R+D+ ++ RG IETRL KL + I+LA AG+KRLK + I Sbjct: 121 RIATGSKRRSYQLLRQRNDLEIVGIRGNIETRLRKLEEQQLDGIVLAAAGLKRLKLKPYI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L P+ QGA+ IE +LV + + V ERAFL EL+G C Sbjct: 181 TQTLKECIMVPAVAQGALAIEVCKEREDLIQLVNALCDPALDEEVCAERAFLQELNGGCH 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + + +T+ Y + DG ++ +G R A+ + AA +R Sbjct: 241 TPLGARCILHDTTVELYAVYGNEDGTRLKQLHVSGAREQAVELAIQAAAVLR 292 >gi|222151551|ref|YP_002560707.1| porphobilinogen deaminase homolog [Macrococcus caseolyticus JCSC5402] gi|254800255|sp|B9E743|HEM3_MACCJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|222120676|dbj|BAH18011.1| porphobilinogen deaminase homolog [Macrococcus caseolyticus JCSC5402] Length = 307 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 114/290 (39%), Positives = 169/290 (58%), Gaps = 5/290 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + L H P I I + TKGD+I N L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQSQQFIDQLKRKH--PNLEIEIKEIVTKGDQIVNVQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ L G ID A+HS KD+P+ L +GL + RED RD +I+ L +L S++ Sbjct: 64 IEQALYDGTIDFAIHSLKDVPSVLPEGLTLGCIPVREDARDAYIAKHHIPLHELKPGSIV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-VIK 186 GTSSLRR A LL + + RG I+TRL KL + AI+LA AG+ R+ +K ++ Sbjct: 124 GTSSLRRGAQLLDQYPHLEIKWIRGNIDTRLAKLRDEDYDAIILAAAGLNRMGWDKSIVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E LN E P+ GQGA+ IE ++ + L+K ++ E+T ER FL +DGSC+ Sbjct: 184 EYLNPELMLPAIGQGALGIECRSDDAEVLALLKSVHDEETELCTEAERTFLRLMDGSCQV 243 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 IAG A G ++ F G++++ DGK ++V+ +G + I IG A+ + Sbjct: 244 PIAGHATMVGESIEFTGLIMSPDGKEKYKVTHSGG--NPIEIGTQVAKAM 291 >gi|115378196|ref|ZP_01465368.1| porphobilinogen deaminase [Stigmatella aurantiaca DW4/3-1] gi|310820650|ref|YP_003953008.1| porphobilinogen deaminase [Stigmatella aurantiaca DW4/3-1] gi|115364784|gb|EAU63847.1| porphobilinogen deaminase [Stigmatella aurantiaca DW4/3-1] gi|309393722|gb|ADO71181.1| Porphobilinogen deaminase [Stigmatella aurantiaca DW4/3-1] Length = 314 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 103/265 (38%), Positives = 152/265 (57%), Gaps = 2/265 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L H P ++ ++ ++T+GDR + L+ +GGKGLF Sbjct: 5 VRIATRQSPLALWQARHVGALLTAQH--PGLSVSLVEMTTEGDRFLSAPLSSVGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G D AVHS KDM + L +GL ++A RED RD F S T +L L + Sbjct: 63 KEIEQALLDGRADIAVHSLKDMTSVLPEGLMLAAVPVREDPRDAFCSPTGLTLDRLPQGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR +L WR D+ ++ RG ++TRL K + +LA+AG+KRL E+ I Sbjct: 123 RVGTSSLRRSCILRSWRKDLEIVSLRGNVQTRLQKTRDLGLAGTVLAHAGLKRLGLEREI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L+ P+ GQG + I+ + + + L+ + T +V ERA LA+L+G CK Sbjct: 183 SEVLSPSVSLPAVGQGVLAIQCRTEDAEVRALLGPLEDAVTRVAVTAERALLAKLEGGCK 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270 +AG A + ++ G V DG Sbjct: 243 VPLAGHATVEQGRVHLRGFVGRPDG 267 >gi|239905446|ref|YP_002952185.1| porphobilinogen deaminase [Desulfovibrio magneticus RS-1] gi|239795310|dbj|BAH74299.1| porphobilinogen deaminase [Desulfovibrio magneticus RS-1] Length = 311 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 109/300 (36%), Positives = 164/300 (54%), Gaps = 4/300 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A L H P + ++P+ TKGD I + L ++GGKGLF +E Sbjct: 7 IATRGSKLALWQANHVADRLRQTH--PGLAVDLLPIKTKGDIILDVPLAKVGGKGLFVKE 64 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ L+ G D AVHS KD+P + GL + RED D +S SL L + + Sbjct: 65 IEEALLDGRADLAVHSMKDVPAEQPAGLVVGIVPEREDPCDRLLSVAYDSLAALPQGATV 124 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRRKA LL R D++++D RG ++TR+ KL + + AI++A AG+ RL+ Sbjct: 125 GTSSLRRKAQLLALRPDLAIVDLRGNLDTRVKKLLDGQFDAIIVAAAGLNRLELSAPKAV 184 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 L +F P+ QGA+ IE +++P+ ++ +H ++ D+V ER FL L+G C+ Sbjct: 185 RLGPPEFLPAAAQGALGIEYRLDDPETAAMLAFFDHPESHDAVAAERGFLGHLEGGCQVP 244 Query: 248 IAGFAYCKGSTLYFYGIVLASD-GKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 IA A G ++ G+V + G+ F E + +G R A +G A+ + K V + Sbjct: 245 IAAHAVIDGDMIHLEGLVADPETGQTFREAA-SGPRSQATALGVAVAEAVLARGAKAVLD 303 >gi|225630165|ref|YP_002726956.1| porphobilinogen deaminase [Wolbachia sp. wRi] gi|254800263|sp|C0R2M3|HEM3_WOLWR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|225592146|gb|ACN95165.1| porphobilinogen deaminase [Wolbachia sp. wRi] Length = 292 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 113/292 (38%), Positives = 164/292 (56%), Gaps = 8/292 (2%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +IGTR S LA+ A E + L+D P +I I+ + T GD+ N L EIGGKGLF + Sbjct: 4 KIGTRGSKLAVVQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFIK 61 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE +L+ ID AVHS KD+P GL I L R D FISH SL+ L + Sbjct: 62 EIEAELLENNIDMAVHSLKDVPAFFSWGLTIPCVLERLSPCDAFISHKHNSLESLPQQAT 121 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 I TS++RRK LL +R D++++ RG + TR L N I+LA AG+ RL+K +I Sbjct: 122 IATSAIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLIT 178 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E+L + + GQGAICI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC + Sbjct: 179 EVLPPKVMLSAVGQGAICIQCRRNDVKIIDLLEKINNNMSFIGVKSERSFMKTVNGSCFT 238 Query: 247 AIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +A A Y + LY ++ +DGK + R DA +G DA ++ Sbjct: 239 PLAALAEYVSENMLYLRCML--ADGKNIYFTERTSFIEDAEKMGMDAGLELK 288 >gi|319789486|ref|YP_004151119.1| porphobilinogen deaminase [Thermovibrio ammonificans HB-1] gi|317113988|gb|ADU96478.1| porphobilinogen deaminase [Thermovibrio ammonificans HB-1] Length = 311 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 111/305 (36%), Positives = 175/305 (57%), Gaps = 6/305 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL + ++ + K P + ++ ++TKGD+I + L +IG KGLFT Sbjct: 3 IRIGTRKSKLALWQSEWVKAQIE--KKFPDVEVELVKITTKGDKILDVPLAKIGDKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ ++ GE+D AVHS KD+P+KL KGL++ A+ RED RD +S +L+ L + Sbjct: 61 KEIEEAMLRGEVDIAVHSLKDVPSKLPKGLKLIAFSDREDPRDALLSCGRYTLETLPEGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRRKA L R D+ + D RG ++TR+ KL + AI+LA AG+KRL E+ I Sbjct: 121 VVGTSSLRRKAQLRILRPDLQIKDLRGNVDTRIRKLKEGQYDAIILAAAGVKRLGWEEEI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDGSC 244 EIL+ E PS QG + IE + + + +V+ +N ++ + ERAFL ++G C Sbjct: 181 DEILSPERMIPSVCQGILGIEGREGDSEVERIVREAVNSYESEVAATVERAFLRTVEGGC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDAAQYIRFISN 301 + + +A + + +G+ +H+ V R + +A +IG A+ + Sbjct: 241 QVPLGCYAVVNEDRILVRAFISDLNGRFYHKEEGVFRFKDLREADSIGVAVAERLLSAGG 300 Query: 302 KNVFN 306 K + Sbjct: 301 KTILE 305 >gi|146280919|ref|YP_001171072.1| porphobilinogen deaminase [Pseudomonas stutzeri A1501] gi|145569124|gb|ABP78230.1| porphobilinogen deaminase [Pseudomonas stutzeri A1501] Length = 314 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 107/293 (36%), Positives = 161/293 (54%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGGKGL Sbjct: 5 REIRIATRKSALALWQAEYVKARLEASH--PGLKVSLVPMVSRGDKLLDAPLAKIGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ E D AVHS KD+P + +GL + RED RD F+S+ SL L Sbjct: 63 FVKELETALLENEADIAVHSMKDVPMEFPEGLGLYCICEREDPRDAFVSNRFDSLDALPP 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL + Sbjct: 123 GSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFGE 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ + +++ P+ GQGA+ IE + + L+ +NH T V ERA L+G Sbjct: 183 RIRSSIGVDESLPAGGQGAVGIECRTGDSEVHALLACLNHAPTATRVVAERALNKRLNGG 242 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ IA +A +G L+ G+V DG + +A +G A+ + Sbjct: 243 CQVPIACYAVLEGEQLWLRGLVGQPDGTLLLRAEGRAPAAEAEALGVQVAEEL 295 >gi|121595211|ref|YP_987107.1| porphobilinogen deaminase [Acidovorax sp. JS42] gi|120607291|gb|ABM43031.1| porphobilinogen deaminase [Acidovorax sp. JS42] Length = 320 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 102/254 (40%), Positives = 148/254 (58%), Gaps = 4/254 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A +S L + H + ++ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 23 IATRESQLALWQAEHVQSLL----RARGHAVALLGMTTRGDQILDRTLSKVGGKGLFVKE 78 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P +L +G ++ + RED RD F+S SL +L +V+ Sbjct: 79 LEVALEEGRADIAVHSLKDVPMELPQGFALACVMEREDPRDAFVSPGYASLDELPHGAVV 138 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+ALL R D+ + RG ++TRL KL+ + AI+LA AG+KRL + I+ Sbjct: 139 GTSSLRRQALLQALRPDLQIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHERIRA 198 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + E P+ GQGA+ IE + +E + + HE TW +V ERA + GSC Sbjct: 199 VFTPEQMLPAAGQGALGIEIRGDRHDLREALAPLAHERTWLTVTAERAVSRAMGGSCSMP 258 Query: 248 IAGFAYCKGSTLYF 261 +A G TL Sbjct: 259 LAAHGQWDGDTLSL 272 >gi|315282478|ref|ZP_07870883.1| porphobilinogen deaminase [Listeria marthii FSL S4-120] gi|313613876|gb|EFR87615.1| porphobilinogen deaminase [Listeria marthii FSL S4-120] Length = 309 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 115/297 (38%), Positives = 170/297 (57%), Gaps = 11/297 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L Sbjct: 60 LFVSEVEQALSDKAIDFAVHSMKDVPSSLKEGLVIGAIPKRESPLDCFVFNQVSSLDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 120 KGAVIGTSSLRRAAQLLKHRPDFIIKPIRGNIDTRLQKLHAENFDAIILAKAGLSRMG-- 177 Query: 183 KVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + L +ED P P+ GQGA+ IE ++ + ++++ ++HE+T V ER FL Sbjct: 178 WLENTTLKLEDIPAELCLPAVGQGALAIECRESDQQIRDMLASVHHEETGVCVEAERVFL 237 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 +L+G C+ IAGFA G ++F G+V +DG + E + G + +IG A+ Sbjct: 238 KKLNGGCEIPIAGFAAKTGDVIHFKGLVGNADGSVILESEQTGT--NPSDIGNQVAE 292 >gi|327479188|gb|AEA82498.1| porphobilinogen deaminase [Pseudomonas stutzeri DSM 4166] Length = 312 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 107/293 (36%), Positives = 161/293 (54%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGGKGL Sbjct: 3 REIRIATRKSALALWQAEYVKARLEASH--PGLKVSLVPMVSRGDKLLDAPLAKIGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ E D AVHS KD+P + +GL + RED RD F+S+ SL L Sbjct: 61 FVKELETALLENEADIAVHSMKDVPMEFPEGLGLYCICEREDPRDAFVSNRFDSLDALPP 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL + Sbjct: 121 GSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFGE 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ + +++ P+ GQGA+ IE + + L+ +NH T V ERA L+G Sbjct: 181 RIRSSIGVDESLPAGGQGAVGIECRTGDSEVHALLACLNHAPTATRVVAERALNKRLNGG 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ IA +A +G L+ G+V DG + +A +G A+ + Sbjct: 241 CQVPIACYAVLEGEQLWLRGLVGQPDGTLLLRAEGRAPAAEAEALGVQVAEEL 293 >gi|293604316|ref|ZP_06686723.1| hydroxymethylbilane synthase [Achromobacter piechaudii ATCC 43553] gi|292817193|gb|EFF76267.1| hydroxymethylbilane synthase [Achromobacter piechaudii ATCC 43553] Length = 315 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 110/289 (38%), Positives = 160/289 (55%), Gaps = 2/289 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A R L ++ P + ++ L+T+GD+I +RTL+++GGKGLF +E Sbjct: 9 IATRASRLALWQAEHVRDRLRTLY--PACAVELLTLTTRGDQILDRTLSKVGGKGLFVKE 66 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L+ G D AVHS KD+P L ++ A L R D RD F+S+ L DL +V+ Sbjct: 67 LENALLDGRADLAVHSLKDVPVDLQAPFELCAILDRADPRDAFVSNRYAGLADLPAGAVV 126 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR++ + + V RG ++TRL KL+ + AI+LA AG++RL E I+ Sbjct: 127 GTSSLRRESQIRARFPTLVVKPLRGNLDTRLGKLDKGEYDAIVLAAAGLQRLGLESRIRS 186 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L+ D P+ GQGA+ IE + + + + T V ERA +L GSC+ Sbjct: 187 LLDPADSLPAAGQGALGIEIRNDRDDMRAWLAPLISAATTSCVQAERAVSRKLGGSCQVP 246 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +A FA G TL +V + DG R+G DA +G AAQ + Sbjct: 247 LAAFAEISGDTLSLRALVASPDGVRMVHTRRSGPVADAQALGEAAAQEL 295 >gi|198284968|ref|YP_002221289.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666388|ref|YP_002427653.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC 23270] gi|226740625|sp|B7JBH8|HEM3_ACIF2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226740626|sp|B5ERN6|HEM3_ACIF5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|198249489|gb|ACH85082.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518601|gb|ACK79187.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 306 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 106/277 (38%), Positives = 157/277 (56%), Gaps = 3/277 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLA+ A R++L+ +H P + II ++T GD + + L +GGKGLF Sbjct: 5 LRIGTRASPLAVWQAEHVRAALLRLH--PGMAVEIITMTTSGDVLLDAPLHALGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L +D AVHS KD+P GL+I A + RED+RD F+S+T L + Sbjct: 63 KEIEDALQQRRVDVAVHSMKDVPALQPDGLEIVAIMAREDVRDAFVSNTFLHPDALPEGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G+SSLRR+A LL + V D RG + TRL +L+ AI+LA AG+KRL I Sbjct: 123 RVGSSSLRRRAQLLERYPHLRVEDLRGNVATRLRRLDEGHYDAIILAAAGLKRLGLPDRI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +L+I+ P+ GQGAI IE ++ + +EL+ + DT + V ER+ L G C+ Sbjct: 183 THLLDIDRSLPAVGQGAIGIEARSDDRRTRELLAPLADADTQNCVLAERSMNQVLGGDCR 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNGN 281 +A A +G + G+V DG ++ H ++ + Sbjct: 243 LPVAALARWQGPQMLLRGLVATPDGRRVLHAEAKGSD 279 >gi|313893126|ref|ZP_07826703.1| hydroxymethylbilane synthase [Veillonella sp. oral taxon 158 str. F0412] gi|313442479|gb|EFR60894.1| hydroxymethylbilane synthase [Veillonella sp. oral taxon 158 str. F0412] Length = 305 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 104/275 (37%), Positives = 158/275 (57%), Gaps = 2/275 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + L ++ P + ++ +TKGDRI + L ++GGKGLFT Sbjct: 5 IRIGTRKSALALWQAEHISAELQRLY--PNITVELVHFNTKGDRILEKPLAQVGGKGLFT 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E+E+ + G+ID AVHS KDMPT+L +GL + A RE D +S ++L L + Sbjct: 63 AELEEAMHKGDIDIAVHSLKDMPTELPEGLTLGAISAREVPYDALVSPVYKTLDKLPQGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A LL R D+ V RG ++TRL+K+ K ++LA AG+KRL + I Sbjct: 123 RVGTSSLRRQAQLLHVRPDLKVEVIRGNVQTRLSKIETEKLDGVILAQAGLKRLGLDDQI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ ++ P+ GQGA+ IE ++ + E++ IN E T +V ER+FL +L+G C+ Sbjct: 183 TQVFKADEMIPAVGQGALAIECRADDTEMLEMLAPINDEATRYAVEGERSFLRQLNGGCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 + L ++ + DGK +E +G Sbjct: 243 VPMGVHGTIDKGQLTLKAMIASLDGKTVYEGEISG 277 >gi|95931480|ref|ZP_01314180.1| porphobilinogen deaminase [Desulfuromonas acetoxidans DSM 684] gi|95132465|gb|EAT14164.1| porphobilinogen deaminase [Desulfuromonas acetoxidans DSM 684] Length = 313 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 110/292 (37%), Positives = 171/292 (58%), Gaps = 8/292 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LAL A+ L D + I+ + T+GD++ + ++ +IG KG+FT Sbjct: 5 IKIGTRRSKLALWQAYYVEQLLQDAG----MDTEIVEIDTRGDQVLDVSIAKIGSKGVFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKDLALH 124 EE+E +L SG+ID AVHSAKDM ++L +G +I A+ RE + DV +S L D + Sbjct: 61 EELEDQLRSGDIDIAVHSAKDMQSELPEGFEIIAFTIREKVNDVVVSRDKSIRLGDTSRP 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IG+SS+RR+A+L + +++I+ RG ++TR+ K+++ + AILLAYAG+ R++ + Sbjct: 121 LTIGSSSVRRRAILKAYYPHLNIIEMRGNLQTRIGKMDDGQCDAILLAYAGVNRMEYNDL 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVN-NPKAQELV-KVINHEDTWDSVNCERAFLAELDG 242 I E L +E F P GQG++ IE+ +N + K +E + K +NH DT + ERAFL L G Sbjct: 181 IVETLPLEQFIPPVGQGSVAIESAINLDAKKRETIRKAVNHPDTEFRLLAERAFLKTLKG 240 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 C A +G L G +++ DG+ + G R DA +G A Sbjct: 241 GCSIPAFCMAELEGDDQLKVTGGMISLDGQTLIKNVLTGARSDAEQLGDQMA 292 >gi|332139557|ref|YP_004425295.1| porphobilinogen deaminase [Alteromonas macleodii str. 'Deep ecotype'] gi|327549579|gb|AEA96297.1| porphobilinogen deaminase [Alteromonas macleodii str. 'Deep ecotype'] Length = 312 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 106/293 (36%), Positives = 165/293 (56%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RI TR S LAL A ++ L++ + P + ++P+ST+GD+I + L +IGGKGL Sbjct: 8 RTVRIATRKSALALWQAEYVKAKLLEHY--PSMTVELVPMSTQGDKILDTPLAKIGGKGL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++ G D AVHS KD+P + +G + A RE+ D F+S+ SL L Sbjct: 66 FIKELEIAMLEGRADIAVHSMKDVPVEFPEGFGLHAICERENPFDAFVSNNHDSLDALPE 125 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+ + ++R D+ + D RG + TRL KL+ + AI+LA AG+ RLK + Sbjct: 126 GAIVGTSSLRRQCQIRKYRPDLIIKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLKMQS 185 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L + P+ GQGA+ IE ++ + L++ +NH DT V ERA L+G Sbjct: 186 RIRMALPADISLPAVGQGAVGIECRNDDEELIALLQALNHADTHTRVTAERAMNERLEGG 245 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ I FA L G+V DG S +R A ++G + A+ + Sbjct: 246 CQVPIGSFATLDNDVLTLTGMVGKPDGSELLFASATASREKAKDMGIEVAEAL 298 >gi|332284596|ref|YP_004416507.1| porphobilinogen deaminase [Pusillimonas sp. T7-7] gi|330428549|gb|AEC19883.1| porphobilinogen deaminase [Pusillimonas sp. T7-7] Length = 315 Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 110/291 (37%), Positives = 160/291 (54%), Gaps = 4/291 (1%) Query: 1 MEKKPFR--IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M + P + I TR S LAL A R L ++ P + ++ ++T+GD+I +R+L+++ Sbjct: 1 MSEAPAKLVIATRASRLALWQAEHVRDRLQTLY--PQCQVSLLTMTTRGDQILDRSLSKV 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLF +E+E L+ G D AVHS KD+P + +S L R+D RD F+S+ SL Sbjct: 59 GGKGLFVKELETALLDGRADLAVHSLKDVPVDMQSPFALSVILERDDPRDAFVSNDYSSL 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 DL SV+GTSSLRR+A + + + V RG ++TRL KL+ AI+LA AG++R Sbjct: 119 DDLPAGSVVGTSSLRREAQIRQRYPQLQVQPLRGNLDTRLGKLDRGDYAAIILASAGLRR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L E I+ LN E P+ GQGA+ IE + Q + ++ DT ERA Sbjct: 179 LGLEARIRSHLNPEQSLPAAGQGALGIEILESRSDMQTWLAPLSDPDTTACALAERAVSR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 L GSC+ +A FA G+TL G+V DG +G+ A +G Sbjct: 239 VLGGSCQVPLAAFAQRDGNTLMVRGLVAEPDGSRIIRAQVSGDVSQAEELG 289 >gi|226326699|ref|ZP_03802217.1| hypothetical protein PROPEN_00552 [Proteus penneri ATCC 35198] gi|225204920|gb|EEG87274.1| hypothetical protein PROPEN_00552 [Proteus penneri ATCC 35198] Length = 291 Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 104/271 (38%), Positives = 153/271 (56%), Gaps = 2/271 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A + L H P + ++P+ TKGD I + L ++GG Sbjct: 1 MSKSTIRIATRQSPLAMWQALYVKEQLQLTH--PGLVVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+ +L++ Sbjct: 59 KGLFVKELELALLESRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYNALEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL+KL+N AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLKAQRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ E P+ GQGA+ I +N+ + + L +NH T V +RA L Sbjct: 179 LNERIRTPLSAEQSLPAVGQGAVGIGRQLNDNETRHLFDALNHSPTAILVKIKRAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 +G C+ I +A + + F +V + DG+ Sbjct: 239 EGGCQVPIGTYAIWQDDKILFGALVGSPDGE 269 >gi|323699104|ref|ZP_08111016.1| porphobilinogen deaminase [Desulfovibrio sp. ND132] gi|323459036|gb|EGB14901.1| porphobilinogen deaminase [Desulfovibrio desulfuricans ND132] Length = 310 Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 112/303 (36%), Positives = 163/303 (53%), Gaps = 2/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL A + L H P ++ ++ + TKGD+I + L ++GGKGL Sbjct: 2 KKLTIATRGSALALWQANHIKDRLEAEH--PGLSVDLLKIKTKGDKILDVPLAKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+ G AVHS KD+PT+L GL++ RE+ D +S L L Sbjct: 60 FVKEIEEALLDGRAQLAVHSMKDVPTELPDGLEVGIIPEREEATDSLLSVKYDGLAGLPE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR++ L R D+ + RG ++TRLNKL N + AI+LA AG+KRL Sbjct: 120 GAVVGTSSLRRQSQLCALRPDLKIETLRGNLDTRLNKLLNGEYDAIVLATAGLKRLAMSA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +EIL+ +F P+ QGA+ IE + + ++L+ ++H T V ER FL LDG Sbjct: 180 PKQEILSPPEFLPAVAQGALGIEFRSADTEVRDLLAFLDHAPTKHQVLAERGFLTGLDGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IA ++ +G TL G V DG GN A ++G A + K Sbjct: 240 CQVPIAAWSVIEGETLRLTGYVAEVDGSTPIRRMVEGNVAHAWDLGMILAGQVLEAGGKA 299 Query: 304 VFN 306 + + Sbjct: 300 ILD 302 >gi|330890195|gb|EGH22856.1| porphobilinogen deaminase [Pseudomonas syringae pv. mori str. 301020] Length = 313 Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 106/296 (35%), Positives = 163/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL + Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HED V ER+ L Sbjct: 179 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDPAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IA +A +G ++ G+V G + + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPAGSVLLHAEARAPQTSAQALGVQVAEAL 294 >gi|206603978|gb|EDZ40458.1| Porphobilinogen deaminase [Leptospirillum sp. Group II '5-way CG'] Length = 314 Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 118/310 (38%), Positives = 169/310 (54%), Gaps = 7/310 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M P +IG+R S LAL A S + V I P +VI T GD I +R L+E+GG Sbjct: 1 MSLMPLKIGSRGSELALWQARHVASMIESVSGILPEIVVI---KTTGDIILDRQLSEVGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L+ EID AVHS KD+P L GL ++A L RED RDVF+S +K Sbjct: 58 KGLFVKEIEEALLRKEIDLAVHSMKDVPAFLPPGLTLAATLKREDPRDVFLSPHYPDIKS 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR A + +RSD+ I RG + TR+ K+ + AI+LA AG+ RL Sbjct: 118 LPHKARVGTSSLRRLAQIREFRSDLEFIPLRGNVGTRIRKMEDGVVEAIILAGAGLLRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++E ++ + P+ GQGA+ +E ++ L++ ++ E T SV ER L L Sbjct: 178 HANRVREWISPQVLLPAIGQGALGLEIRTDDETTGTLIRSLSDESTHLSVAAERGVLQSL 237 Query: 241 DGSCKSAIAGFA-YCKGSTLYFYGIVLASDG--KIFHEVSRNGNRCD-AINIGRDAAQYI 296 +G C+ IA +A + K TL G VL G +I +R+ D A +G D + Sbjct: 238 NGGCQVPIAAYAVWEKNRTLSLEGRVLDISGTRRIHARETRDIATIDEAYQMGMDLGNRL 297 Query: 297 RFISNKNVFN 306 + + N Sbjct: 298 LADGAEEILN 307 >gi|162139476|ref|YP_855002.2| porphobilinogen deaminase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 315 Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 105/296 (35%), Positives = 161/296 (54%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +I TR SPLAL A + L ++ P + ++P+ST+GD+I + L ++GG Sbjct: 7 MAARTLKIATRKSPLALWQANFVKDRLEALY--PELQVELVPMSTQGDKILDTPLAKVGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ + + Sbjct: 65 KGLFVKELETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFGQIDE 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 125 LPQGAVVGTSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLE 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I + E P+ GQGA+ IE +++ + L+ + H +T V ERA L Sbjct: 185 MAHRITAFIEPEQSLPANGQGAVGIECRLDDHELHALLAPLEHPETRIRVLTERAMNRAL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 G C+ I +A +G ++ G+V + DG G D +G AQ + Sbjct: 245 QGGCQVPIGAYALVQGEEVWLRGLVGSPDGSRVIRDEIRGPLADGEALGHTLAQRL 300 >gi|117559297|gb|ABK36245.1| porphobilinogen deaminase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 330 Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 105/296 (35%), Positives = 161/296 (54%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +I TR SPLAL A + L ++ P + ++P+ST+GD+I + L ++GG Sbjct: 22 MAARTLKIATRKSPLALWQANFVKDRLEALY--PELQVELVPMSTQGDKILDTPLAKVGG 79 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ + + Sbjct: 80 KGLFVKELETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFGQIDE 139 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 140 LPQGAVVGTSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLE 199 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I + E P+ GQGA+ IE +++ + L+ + H +T V ERA L Sbjct: 200 MAHRITAFIEPEQSLPANGQGAVGIECRLDDHELHALLAPLEHPETRIRVLTERAMNRAL 259 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 G C+ I +A +G ++ G+V + DG G D +G AQ + Sbjct: 260 QGGCQVPIGAYALVQGEEVWLRGLVGSPDGSRVIRDEIRGPLADGEALGHTLAQRL 315 >gi|83643194|ref|YP_431629.1| porphobilinogen deaminase [Hahella chejuensis KCTC 2396] gi|123753698|sp|Q2SQ70|HEM3_HAHCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|83631237|gb|ABC27204.1| porphobilinogen deaminase [Hahella chejuensis KCTC 2396] Length = 311 Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 106/270 (39%), Positives = 153/270 (56%), Gaps = 2/270 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K+ I TR S LAL A + L +H P + ++ L+TKGD I + L ++GG Sbjct: 1 MPKQHLVIATRQSALALWQAEHVKQRLEALH--PGLTVELLGLTTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + GL + A L RE D F+S+ SL + Sbjct: 59 KGLFVKELETAMLEGRADIAVHSMKDVPMEFPPGLGLGAILERETPMDAFVSNQYASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ ++ RG + TRL KL+ AI+LA +G+KRL Sbjct: 119 LPEGAVVGTSSLRRQCQLSERRPDLKILSLRGNVNTRLAKLDAGDFDAIILAASGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+E L E P+ GQGA+ IE +++P+A L+ + +T V+ ERA L Sbjct: 179 FSGRIREELTPEVSLPAVGQGALGIECRLDDPEAMALIAQLQDAETTARVSAERAMNHRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C+ IAG+A G + G+V + DG Sbjct: 239 QGGCQVPIAGYAEITGDQMRLRGLVGSPDG 268 >gi|167630035|ref|YP_001680534.1| porphobilinogen deaminase [Heliobacterium modesticaldum Ice1] gi|167592775|gb|ABZ84523.1| porphobilinogen deaminase [Heliobacterium modesticaldum Ice1] Length = 315 Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 104/287 (36%), Positives = 156/287 (54%), Gaps = 2/287 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++P IGTR S LAL L +++ P + + TKGD+I + L +IG KG Sbjct: 5 QRPVVIGTRDSALALWQTHWVLERLKELY--PEQAFEVKHIKTKGDKILDVALAKIGDKG 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E +++GEID AVHS KD+PT L +G I A RED RD+ IS L++L Sbjct: 63 LFTKELEVAMLNGEIDMAVHSMKDLPTLLPEGCAIGAICVREDCRDILISRNGGGLEELP 122 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GT+SLRRKA + + R D+ ++D RG ++TR+ K+ ++LA AG+KRL Sbjct: 123 RGAKVGTASLRRKAQIWKVRPDLELVDIRGNLQTRMRKMEEQNLDGLILAAAGVKRLGWA 182 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I E + ++ P+ GQG++ IE + LV +NH ++ V ERA L L+G Sbjct: 183 EKITEYIPVDMCLPAVGQGSVGIEIREGDEAIGRLVAALNHAESALCVRAERALLRTLEG 242 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 C+ I G L G+V + DG+ G+ D G Sbjct: 243 GCQVPIGSLGRLSGGKLIVDGVVASLDGRTICRDRVEGDPADPEEAG 289 >gi|114778663|ref|ZP_01453479.1| porphobilinogen deaminase [Mariprofundus ferrooxydans PV-1] gi|114551128|gb|EAU53689.1| porphobilinogen deaminase [Mariprofundus ferrooxydans PV-1] Length = 333 Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 113/284 (39%), Positives = 153/284 (53%), Gaps = 3/284 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L + P ++ + T+GD+I + L ++GGKGLFT Sbjct: 27 IRIATRRSPLALWQAEYIAAELEKMS--PDVTTELVKIVTRGDKILDVPLAKVGGKGLFT 84 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EI++ L G D AVHS KD+PT+L +G I A R D RD + T L L + Sbjct: 85 KEIDEALFDGRADVAVHSMKDVPTQLPEGTSIRALPERADPRDAAATITGGGLDTLPEGA 144 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSSLRR A L + RG I+TRL+K+ + AI+LA AGI+R+ E + Sbjct: 145 TIGTSSLRRVAQLQARFPTFKFVSVRGNIQTRLSKM-GQEVDAIILAAAGIRRMGMEDQM 203 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E ++ E P+ QG + I+T ++ LV +NH DT D ERAFLA L+G C+ Sbjct: 204 HEFIDTEMLLPAVAQGTLGIQTRNDDDVVNALVDRLNHADTVDRTRAERAFLARLEGGCQ 263 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 IA FA G L G+V + DGKI G R D +G Sbjct: 264 VPIAAFATLDGDQLTLKGLVGSVDGKIVIRREIVGLRRDGAAMG 307 >gi|325688053|gb|EGD30072.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK72] Length = 306 Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 112/309 (36%), Positives = 171/309 (55%), Gaps = 14/309 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I A Q+L +L Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCVLGAISQREDVRDCLIFRQAGQTLANLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--- 179 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 120 QGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWM 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ + L P+ QGA+ +E + + ++L+ + E T V+ ERA LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDEKTAAEVSVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK-IFHEVSRNGNRCDAINIGRDAAQYIRF 298 ++ C IA A ++ DG+ IF VS G + A Q +R Sbjct: 240 MNADCSFPIAALARKNDQDYQLEAMLAKEDGQCIF--VSLQGQDGQEL-----AEQAVRQ 292 Query: 299 ISNKNVFNF 307 +++K Sbjct: 293 LADKGAVGM 301 >gi|77359075|ref|YP_338650.1| porphobilinogen deaminase [Pseudoalteromonas haloplanktis TAC125] gi|76873986|emb|CAI85207.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Pseudoalteromonas haloplanktis TAC125] Length = 312 Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 106/291 (36%), Positives = 165/291 (56%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LAL A ++ L H P + ++P+ST+GD I + L +IGGKGLF Sbjct: 8 VRIATRKSALALWQAEFVKAQLEHYH--PGILVELVPMSTQGDIILDTPLAKIGGKGLFV 65 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ ++ G D AVHS KDMP + +GL + RED RD F+S+ ++ +L + Sbjct: 66 KELEQAMLEGLADMAVHSMKDMPVEFPEGLTLHTICEREDPRDAFVSNNFANIDELPQGA 125 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ + R D+ + D RG + TRL KL++ + AI+LA AG+ RL+ + I Sbjct: 126 IVGTSSLRRQCQIRASRPDLKIHDLRGNVNTRLAKLDSGQYDAIILAAAGLIRLEMKDRI 185 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + E P+ GQGA+ IE ++ + L+ + H +T VN ERA L+G C+ Sbjct: 186 RAYIEPEVSLPANGQGAVGIECRTDDEAIKALLAPLEHSETRIRVNAERAMNRHLEGGCQ 245 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A G ++ G+V A DG +G+ DA +G + A+ + Sbjct: 246 VPIGAYALVNGDQVHLRGLVGAIDGSEILRDEVSGHVNDAEKLGVELAKML 296 >gi|71083016|ref|YP_265735.1| hydroxymethylbilane synthase [Candidatus Pelagibacter ubique HTCC1062] gi|71062129|gb|AAZ21132.1| hydroxymethylbilane synthase [Candidatus Pelagibacter ubique HTCC1062] Length = 307 Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 104/304 (34%), Positives = 178/304 (58%), Gaps = 5/304 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHK-IPPHNIVIIPLSTKGDRITNRTLTEIG 59 M+ + IG+R S LAL +A + R ++ K ++I + TKGD++ ++ L+E+G Sbjct: 1 MKNRKIIIGSRGSKLALIYAEKAREKILKHSKDFGIEEVIIKEIVTKGDQVQDKRLSEVG 60 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF++ IE +L+ +ID AVH+ KDMP++ +GL +L R D R++ IS + LK Sbjct: 61 GKGLFSKTIEVELLEKKIDIAVHALKDMPSEETRGLLTDCFLERNDPREILISKDNKHLK 120 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DLA +S+IGTSS RR+ + + R D++ RG ++TR+ KL N AI+L+YAGI L Sbjct: 121 DLASNSIIGTSSYRREFQIKKIRDDLNCKLIRGNVDTRIRKLKENLYDAIILSYAGIDSL 180 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I + + + P GQG I ++ N+ EL+K ++H+ T S+ ER L Sbjct: 181 GLNQNISQTFSTSEIIPCAGQGVIALQCRDNDESLIELLKQVDHQSTHSSIKAERNVLKV 240 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDG--KIFHEVSRNGNRCDAINIGRDAAQYIR 297 L+G C++A+ FA +G+ + + + DG + + + S + N+ + + I + + ++ Sbjct: 241 LEGDCETAVGAFANIEGNKINLEVELFSLDGSKRFYLKSSESVNKAEELGI--EMGKTLK 298 Query: 298 FISN 301 +SN Sbjct: 299 KMSN 302 >gi|332534414|ref|ZP_08410254.1| porphobilinogen deaminase [Pseudoalteromonas haloplanktis ANT/505] gi|332036148|gb|EGI72623.1| porphobilinogen deaminase [Pseudoalteromonas haloplanktis ANT/505] Length = 312 Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 107/293 (36%), Positives = 163/293 (55%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RI TR S LAL A ++ L H + ++P+ST+GD I + L +IGGKGL Sbjct: 6 KLVRIATRKSALALWQAEFVKAELERFHA--DVRVELVPMSTQGDIILDTPLAKIGGKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ ++ G D AVHS KD+P + +GL + RED RD F+S+ +L L Sbjct: 64 FVKELEQAMLDGRADIAVHSMKDVPVEFPQGLALHTICEREDPRDAFVSNNFANLSALPQ 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+ + R D+ + D RG + TRL KL++ + AI+LA AG+ RL+ E Sbjct: 124 GAIVGTSSLRRQCQIKALRPDLDIRDLRGNVNTRLGKLDDGQYDAIILAAAGLIRLEMES 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + E P+ GQGA+ IE +++ + L+ + H T VN ER+ L+G Sbjct: 184 RIADYIEPEVSLPANGQGAVGIECRIDDEVTKALLAPLEHTQTRIRVNAERSMNRYLEGG 243 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ I +A G ++ G+V A DG G+ DA IG + A+ + Sbjct: 244 CQVPIGAYALVDGEQVHLRGLVGAVDGSEILRDEVTGHVNDAEKIGIELAKKL 296 >gi|321312347|ref|YP_004204634.1| porphobilinogen deaminase [Bacillus subtilis BSn5] gi|320018621|gb|ADV93607.1| porphobilinogen deaminase [Bacillus subtilis BSn5] Length = 313 Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 117/302 (38%), Positives = 165/302 (54%), Gaps = 11/302 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGKGL Sbjct: 2 RTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFAFEIKEIVTKGDRIVDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L++ EID AVHS KDMP L +GL I RED RD IS L ++ Sbjct: 60 FVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEMKE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KE 182 +VIGTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+ K+ Sbjct: 120 GAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKQ 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++G Sbjct: 180 DVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAMEG 239 Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGN-------RCDAINIGRDAAQ 294 C+ IAG++ G + +V + DGKI + + GN RC A+ + A Sbjct: 240 GCQVPIAGYSVLNGQDEIEMTALVASPDGKIIFKETVTGNDPEEVGKRCAALMADKGAKD 299 Query: 295 YI 296 I Sbjct: 300 LI 301 >gi|217964297|ref|YP_002349975.1| porphobilinogen deaminase [Listeria monocytogenes HCC23] gi|290893957|ref|ZP_06556933.1| porphobilinogen deaminase [Listeria monocytogenes FSL J2-071] gi|254800254|sp|B8DHJ2|HEM3_LISMH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|217333567|gb|ACK39361.1| porphobilinogen deaminase [Listeria monocytogenes HCC23] gi|290556495|gb|EFD90033.1| porphobilinogen deaminase [Listeria monocytogenes FSL J2-071] gi|307571137|emb|CAR84316.1| hemC [Listeria monocytogenes L99] Length = 309 Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 113/283 (39%), Positives = 163/283 (57%), Gaps = 9/283 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PAFDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + +L +L Sbjct: 60 LFVSEVEQALSDKTIDFAVHSMKDVPSSLKEGLVIGAIPKRESPLDCFVFNQVNALDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 120 HGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMG-- 177 Query: 183 KVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + L +ED P P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL Sbjct: 178 WLENTTLKLEDIPPELCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFL 237 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 +L+G C+ IAGFA ++F G+V +DG I E + G Sbjct: 238 KKLNGGCEIPIAGFATKANEAVHFKGLVGNADGSIILEAEQTG 280 >gi|157825828|ref|YP_001493548.1| porphobilinogen deaminase [Rickettsia akari str. Hartford] gi|166217781|sp|A8GNR5|HEM3_RICAH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157799786|gb|ABV75040.1| porphobilinogen deaminase [Rickettsia akari str. Hartford] Length = 301 Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 104/249 (41%), Positives = 149/249 (59%), Gaps = 5/249 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR SPLAL +T + + + P N I+P+ T GD I N+ L +IGGK LF Sbjct: 5 IRIGTRNSPLAL---IQTNLVIQQIKQFFPDINCAIVPIITSGDLIQNKPLYDIGGKALF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE+ L+ +ID AVHS KD+P ++ + L ISA L RED RDVF+ +S+K+L H Sbjct: 62 LKEIEQALLDKKIDLAVHSLKDVPGRIPEELVISAVLEREDPRDVFVCLNYKSIKELPQH 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-EK 183 SVIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAYAG+KRL Sbjct: 122 SVIGSSAVRRKAFIQKIRPDLKVTIFRGNVDSRIKKLMTGEVDATILAYAGLKRLGAFNP 181 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ P GQG I +E N+ E+ INH T + + ERAFL LD + Sbjct: 182 EYCHLIEYSHMLPCVGQGVIAVEIRQNDNSMLEICNQINHLPTCELIKPERAFLEYLDAN 241 Query: 244 CKSAIAGFA 252 C++ I ++ Sbjct: 242 CRTPIGTYS 250 >gi|303257759|ref|ZP_07343771.1| hydroxymethylbilane synthase [Burkholderiales bacterium 1_1_47] gi|331001196|ref|ZP_08324823.1| hydroxymethylbilane synthase [Parasutterella excrementihominis YIT 11859] gi|302859729|gb|EFL82808.1| hydroxymethylbilane synthase [Burkholderiales bacterium 1_1_47] gi|329569128|gb|EGG50920.1| hydroxymethylbilane synthase [Parasutterella excrementihominis YIT 11859] Length = 310 Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 106/259 (40%), Positives = 157/259 (60%), Gaps = 4/259 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR SPLAL A +S L + K P ++ ++ L+TKGD+I + TL++IGGKGLF +E Sbjct: 9 IATRESPLALWQAKYVQSCLKE--KFPELDVQLLGLTTKGDKILDVTLSKIGGKGLFVKE 66 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E ++ G+ AVHS KD+P LL+ ++A + RED RD +SH SL+++ SV+ Sbjct: 67 LEAAMLEGKAQIAVHSLKDVPMDLLEPFTLAAVMVREDPRDAVVSHKYASLEEMPAGSVV 126 Query: 128 GTSSLRRKALLLRWR-SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 GTSSLRR+ L++R R + V RG + TRL+KL+N + +++A AG+KRL I+ Sbjct: 127 GTSSLRRE-LMVRSRFPHLKVEMIRGNVGTRLSKLDNGQYDTLVMAVAGLKRLGLSDRIR 185 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 I+ E P+PGQGAI IE N+ Q+ V+ +N EDT ERA L GSC+ Sbjct: 186 SIIPPEVSLPAPGQGAIGIEAVGNDEMTQKYVEALNDEDTRLCTQAERAVSRALGGSCQV 245 Query: 247 AIAGFAYCKGSTLYFYGIV 265 +A +A ++ +V Sbjct: 246 PLAAYATIDDGQMFLRALV 264 >gi|119947244|ref|YP_944924.1| porphobilinogen deaminase [Psychromonas ingrahamii 37] gi|166217780|sp|A1T0R0|HEM3_PSYIN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|119865848|gb|ABM05325.1| porphobilinogen deaminase [Psychromonas ingrahamii 37] Length = 310 Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 107/297 (36%), Positives = 167/297 (56%), Gaps = 4/297 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-IIPLSTKGDRITNRTLTEIG 59 M + RI TR SPLA+ A +S L+ H P+ IV ++P+ TKGD I + L ++G Sbjct: 1 MTAQKIRIATRHSPLAMWQANFIKSELLKYH---PNLIVELLPMKTKGDIILDTPLAKVG 57 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E ++ G D AVHS KD+P +GL ++ RED D F+S+ + L Sbjct: 58 GKGLFVKELEVAILEGRADIAVHSIKDVPVDFPEGLGLTTICKREDPHDAFVSNHYKQLD 117 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +++GT SLRR+ +L R DI + + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 118 ELPEGAIVGTCSLRRQCQILALRPDIIIKNLRGNVNTRLRKLDEGEYDAIILAAAGLMRL 177 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + I ++ E P+ GQGA+ IE +++ + L+K + +T + ERA + Sbjct: 178 EMQHRITSLIAPEVSLPAVGQGAVGIECRLDDEQTITLLKPLEDPETRIRITAERAMNLK 237 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L G C+ I FA + L+ G+V + DGK G++ DA +G A+ + Sbjct: 238 LQGGCQVPIGSFAILENEQLFLRGLVGSVDGKQIIRKEITGHQNDAQQLGITLAEQL 294 >gi|190570895|ref|YP_001975253.1| porphobilinogen deaminase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019411|ref|ZP_03335217.1| porphobilinogen deaminase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357167|emb|CAQ54582.1| porphobilinogen deaminase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212994833|gb|EEB55475.1| porphobilinogen deaminase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 292 Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 113/288 (39%), Positives = 161/288 (55%), Gaps = 8/288 (2%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +IGTR S LAL A E + L++ P ++ II + T GD+ N TL EIGGKGLF Sbjct: 4 KIGTRGSDLALIQALEAKQRLLE--SFPNLSVEIIKIKTSGDKYANVTLAEIGGKGLFLR 61 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE +L+ ID AVHS KD+P K L I L R DVFISH +SLK L + Sbjct: 62 EIEAELLKNNIDMAVHSLKDVPAFFSKDLTIPCVLERLSPCDVFISHKYKSLKTLPQQAT 121 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 I TSS+RRK LL R D++V+ RG + TR L N ++LA AG+ RLKK +I Sbjct: 122 IATSSIRRKVQLLNLRPDLNVVPLRGNVTTR---LQNQNFDGMILAEAGLIRLKKYHLIT 178 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E+L + + GQG ICI+ N+ K +L++ IN+ ++ ER+F+ ++GSC + Sbjct: 179 EVLPPKVMLSAVGQGTICIQCRKNDIKVIDLLEKINNNMSFIRAKSERSFMKTVNGSCFT 238 Query: 247 AIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 +A A Y + L+ Y ++ + ++ + R DA +G DA Sbjct: 239 PLAALAEYVSENMLHLYCML--AGERVIYFTERTSFVEDAEKMGMDAG 284 >gi|332995105|gb|AEF05160.1| porphobilinogen deaminase [Alteromonas sp. SN2] Length = 311 Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 108/293 (36%), Positives = 165/293 (56%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RI TR S LAL A ++ L++ H + ++P+ST+GDRI + L +IGGKGL Sbjct: 7 RTIRIATRKSALALWQAEYVKAKLLEHHD--GIAVELVPMSTQGDRILDTPLAKIGGKGL 64 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++ G D AVHS KD+P + +G + A RE+ D F+S+ +L L Sbjct: 65 FIKELEVAMLEGRADIAVHSMKDLPVEFPEGFGLHAICERENPFDAFVSNHFDNLDALPE 124 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR+ + + R D+ + D RG + TRL KL+ + AI+LA AG+ RL E+ Sbjct: 125 GAVVGTSSLRRQCQIRKHRPDLKIKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLGMEE 184 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 IK L P+ GQGA+ IE ++ + L++ +NH +T V+ ERA L+G Sbjct: 185 RIKTGLPASVSLPAVGQGAVGIECRNDDAELIALLQALNHGETQTRVSAERAMNERLEGG 244 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ I FA G ++ G+V DG S G +A +IG + A+ + Sbjct: 245 CQVPIGSFATLDGDSITLTGMVGQPDGSTLLFASATGPTKNAKSIGVEVAEAL 297 >gi|251793296|ref|YP_003008024.1| porphobilinogen deaminase [Aggregatibacter aphrophilus NJ8700] gi|247534691|gb|ACS97937.1| porphobilinogen deaminase [Aggregatibacter aphrophilus NJ8700] Length = 308 Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 102/270 (37%), Positives = 154/270 (57%), Gaps = 2/270 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K +I TR SPLAL A + L ++ P + ++P+ TKGD I + L +IGG Sbjct: 1 MLEKTLKIATRQSPLALWQANYVKDCLQQLY--PDLIVELVPMVTKGDVILDSPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L++ E D AVHS KD+P + +GL ++ RED RD F+S++ ++ + Sbjct: 59 KGLFVKELENALLNKEADIAVHSMKDVPMQFPEGLGLAVICKREDPRDAFVSNSYRTFDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+ RL Sbjct: 119 LPQSAVVGTSSLRRQCQLKALRPDLDIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I + +E P+ GQGA+ IE ++ + ++L+ + +T V ERA L Sbjct: 179 LADRIASFIEVEQSLPAAGQGAVGIECRTDDVQVKQLLAPLADAETTCCVLAERAMNNHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C+ I G+A + LY +V DG Sbjct: 239 QGGCQVPIGGYAVLQQGQLYLRALVGNVDG 268 >gi|222111550|ref|YP_002553814.1| porphobilinogen deaminase [Acidovorax ebreus TPSY] gi|221730994|gb|ACM33814.1| porphobilinogen deaminase [Acidovorax ebreus TPSY] Length = 310 Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 101/254 (39%), Positives = 147/254 (57%), Gaps = 4/254 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A +S L + H + ++ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 13 IATRESQLALWQAEHVQSLL----RARGHAVALLGMTTRGDQILDRTLSKVGGKGLFVKE 68 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P +L +G ++ + RED RD F+S SL +L +V+ Sbjct: 69 LEVALEEGRADIAVHSLKDVPMELPQGFALACVMEREDPRDAFVSPGYASLDELPHGAVV 128 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL + I+ Sbjct: 129 GTSSLRRQVLLQALRPDLQIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHERIRA 188 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + E P+ GQGA+ IE + +E + + HE TW +V ERA + GSC Sbjct: 189 VFTPEQMLPAAGQGALGIEIRGDRHDLREALAPLAHERTWLTVTAERAVSRAMGGSCSMP 248 Query: 248 IAGFAYCKGSTLYF 261 +A G TL Sbjct: 249 LAAHGQWDGDTLSL 262 >gi|91762559|ref|ZP_01264524.1| hydroxymethylbilane synthase [Candidatus Pelagibacter ubique HTCC1002] gi|91718361|gb|EAS85011.1| hydroxymethylbilane synthase [Candidatus Pelagibacter ubique HTCC1002] Length = 307 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 99/271 (36%), Positives = 161/271 (59%), Gaps = 1/271 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHK-IPPHNIVIIPLSTKGDRITNRTLTEIG 59 M+ + IG+R S LAL +A + R ++ K ++I + TKGD++ ++ L+E+G Sbjct: 1 MKNRKIIIGSRGSKLALIYAEKAREKILKHSKDFGIEEVIIKEIVTKGDQVQDKRLSEVG 60 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF++ IE +L+ +ID AVH+ KDMP++ +GL +L R D R++ IS + LK Sbjct: 61 GKGLFSKTIEVELLEKKIDIAVHALKDMPSEETRGLLTDCFLERNDPREILISKDNKHLK 120 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DLA +S+IGTSS RR+ + + R D++ RG ++TR+ KL N AI+L+YAGI L Sbjct: 121 DLASNSIIGTSSYRREFQIKKIRDDLNCKLIRGNVDTRIRKLKENLYDAIILSYAGIDSL 180 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I + + + P GQG I ++ N+ EL+K ++H+ T S+ ER L Sbjct: 181 GLNQNISQTFSTSEIIPCAGQGVIALQCRDNDESLIELLKQVDHQSTHSSIKAERNVLKV 240 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 L+G C++A+ FA +G+ + + + DG Sbjct: 241 LEGDCETAVGAFANIEGNKINLEVELFSLDG 271 >gi|154686951|ref|YP_001422112.1| porphobilinogen deaminase [Bacillus amyloliquefaciens FZB42] gi|166201493|sp|A7Z7A5|HEM3_BACA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|154352802|gb|ABS74881.1| HemC [Bacillus amyloliquefaciens FZB42] Length = 313 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 114/292 (39%), Positives = 162/292 (55%), Gaps = 11/292 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + ++G+R S LA+ + L +++ P +N I + TKGDRI + TL+++GGKGL Sbjct: 2 RTIKVGSRRSKLAMTQTKWVINKLKELN--PSYNFEIREIVTKGDRILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+ EID AVHS KDMP L +GL I RED RD IS Q L + Sbjct: 60 FVKEIEQALLHQEIDMAVHSMKDMPAVLPEGLVIGCIPKREDPRDALISKGHQKLDGIKE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KE 182 +IGTSSLRR A +L R D+++ RG I+TRL KL AI+LA AG+ R+ K+ Sbjct: 120 GGIIGTSSLRRSAQILAERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L + P+ GQGA+ IE ++ + +L E T +V ERAFL ++G Sbjct: 180 DVVSEFLEPDRCLPAVGQGALAIECRESDEELLKLFAQFTDEYTQRTVAAERAFLHAMEG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIF-------HEVSRNGNRCDAI 286 C+ IAG+A + G+V + DGK H+ G RC A+ Sbjct: 240 GCQVPIAGYASVNDRDEVELVGLVASPDGKTIYKETAAGHDPEEIGKRCAAM 291 >gi|302038053|ref|YP_003798375.1| porphobilinogen deaminase [Candidatus Nitrospira defluvii] gi|300606117|emb|CBK42450.1| Porphobilinogen deaminase [Candidatus Nitrospira defluvii] Length = 310 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 112/289 (38%), Positives = 160/289 (55%), Gaps = 4/289 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +GTR S LA+ + ++ L ++ P I + + T GD+I + L +IGG Sbjct: 1 MNRSTLILGTRGSKLAVHQSQWVQARLQEL--APGLTISLQRIQTSGDKILDVPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE L+S EID AVHS KD+PT L +GL I PRED RD I+ L Sbjct: 59 KGLFVKEIEDALLSKEIDLAVHSMKDVPTALPEGLDILCVPPREDPRDALITRDGCRLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSSLRR+A LL +R D ++ RG ++TRL KL + AI+LA AG++RL Sbjct: 119 LKPGAKIGTSSLRRQAQLLHYRPDFTIEMLRGNLDTRLRKLREGQFDAIVLAAAGLRRLA 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I E L + P+ QGA+ IE ++ +EL+ H T +V ERA L L Sbjct: 179 WDAEITEYLPVHLSLPAIAQGALGIEARSDDTFVRELLSRFEHRPTRITVTAERALLHRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCDAIN 287 +G C+ IA A +G L G+V + DG+ I H++ + A+ Sbjct: 239 EGGCQVPIAAHAALEGDRLTVDGLVASVDGRRVIRHQIQGPASEAQALG 287 >gi|224476761|ref|YP_002634367.1| porphobilinogen deaminase [Staphylococcus carnosus subsp. carnosus TM300] gi|254800259|sp|B9DNE1|HEM3_STACT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|222421368|emb|CAL28182.1| porphobilinogen deaminase [Staphylococcus carnosus subsp. carnosus TM300] Length = 308 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 108/301 (35%), Positives = 176/301 (58%), Gaps = 6/301 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + L V P +I I + TKGDRI ++ L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQSRQFIERLKKVE--PDLDIEIKEIVTKGDRIVDKQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+++L EID A+HS KD+P++L GL + RE D FIS L DL S++ Sbjct: 64 IQQELFDHEIDMAIHSLKDVPSELPDGLTLGCIPDREIPLDAFISKNHVQLADLPDGSIV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L ++ + RG I+TRL+KL AI+LA AG++R+ + ++ Sbjct: 124 GTSSLRRGAQILAKYPNLEIKWIRGNIDTRLSKLETEDYDAIILAAAGLRRMGWSDDIVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E L+ E P+ GQGA+ IE ++ + +L+ +++++ + V ER FL E++GSC+ Sbjct: 184 EYLDPELLVPAIGQGALGIECRSDDTELLDLLSKVHNQEVAECVTAERTFLKEMNGSCQV 243 Query: 247 AIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 I G+A + L F G++++ DGK E + GN D + +G++ + ++ K + Sbjct: 244 PIGGYATIDDNGRLTFTGLIMSPDGKQRFEQTATGN--DPVELGKEVSDILKEQGAKEII 301 Query: 306 N 306 + Sbjct: 302 D 302 >gi|317129820|ref|YP_004096102.1| porphobilinogen deaminase [Bacillus cellulosilyticus DSM 2522] gi|315474768|gb|ADU31371.1| porphobilinogen deaminase [Bacillus cellulosilyticus DSM 2522] Length = 310 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 115/304 (37%), Positives = 168/304 (55%), Gaps = 12/304 (3%) Query: 8 IGTRCSPLALAHA---FETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +G+R S LA+ E SL ++ IV TKGD+I + TL+++GGKGLF Sbjct: 6 VGSRKSNLAMTQTKWVIEQLKSLGLNYEFEIKEIV-----TKGDKILDVTLSKVGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIEK + GEID AVHS KD+P ++ G+ + A R D RD FIS++ + L DL Sbjct: 61 VKEIEKAMYDGEIDIAVHSMKDLPAEIADGMAVGAIPKRVDPRDAFISNSGKGLMDLPAG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEK 183 S++GTSSLRR A +L R D+ + RG I+TRL K AI+LA AGI+R+ Sbjct: 121 SIVGTSSLRRSAQVLAKRPDLEIQWIRGNIDTRLRKCREENFDAIILAAAGIERVGWTSD 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ E L E P+ GQGA+ IE ++ + L+ IN DT +V ERAFL ++G Sbjct: 181 IVTEFLEPEVCLPAVGQGALGIECRADDKEVLALLAKINDSDTEKTVTAERAFLHTVEGG 240 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ +AG+A + + +V + DG+ S G D + IG++ AQ + K Sbjct: 241 CQVPVAGYATLQDNGEIALTALVGSPDGQQIFRESIAGT--DPVAIGKEVAQRMLKAGAK 298 Query: 303 NVFN 306 V + Sbjct: 299 KVLD 302 >gi|296132653|ref|YP_003639900.1| porphobilinogen deaminase [Thermincola sp. JR] gi|296031231|gb|ADG81999.1| porphobilinogen deaminase [Thermincola potens JR] Length = 310 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 106/283 (37%), Positives = 160/283 (56%), Gaps = 4/283 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +GTR S LA+ ++T + ++ K+ P + I+ + T+GD+I + L +IG KGLFT+ Sbjct: 7 VGTRDSALAM---WQTNWVVDNLRKLNPDYTFKIVSMKTQGDKILDVALAKIGDKGLFTK 63 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 E+E ++ EID AVHS KD+PT L +GL+I A R D RDV ++ LKD+ + Sbjct: 64 ELEFAMLRNEIDLAVHSMKDLPTVLPEGLKIGAICERHDPRDVLVARDGILLKDMPQGAR 123 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGTSSLRR A LL++R D+ +I RG + TR+ KL I+LA AGI+RL I Sbjct: 124 IGTSSLRRTAQLLKYRPDLQIISLRGNLNTRMAKLERENLDGIILAAAGIERLGWAYRIT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + + E P+ GQG+I IE + + +V +NH + ++ ERA L +L+G C+ Sbjct: 184 QRIPFEVCLPAVGQGSIGIEIREGDEEVSRIVDKLNHGPSAAAITAERAMLKKLEGGCQI 243 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 I +G L G+V + DGK G +A ++G Sbjct: 244 PIGALGRVEGDRLTLEGVVASLDGKELLRSRVEGPASEAASLG 286 >gi|23099523|ref|NP_692989.1| porphobilinogen deaminase [Oceanobacillus iheyensis HTE831] gi|39931547|sp|Q8CXC0|HEM3_OCEIH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|22777752|dbj|BAC14024.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Oceanobacillus iheyensis HTE831] Length = 309 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 116/302 (38%), Positives = 171/302 (56%), Gaps = 9/302 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHN-IVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +GTR S LAL T + + K N I + TKGD+I + TL+++GGKGLF + Sbjct: 6 VGTRKSNLALTQ---TEWVIDQLKKAGVKNEFEIKKIVTKGDQILDVTLSKVGGKGLFVK 62 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIEK + EID AVHS KDMP + +GL IS+ RED RD +++ L+DL ++ Sbjct: 63 EIEKAMFDKEIDLAVHSMKDMPAVIPEGLTISSIPEREDHRDAYLAKDNILLQDLPEGAI 122 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVI 185 +GTSSLRR A +L R D+++ RG IETR+ KL AI+LA +G+KR+ E++I Sbjct: 123 VGTSSLRRGAQILAERPDLTIKWIRGNIETRIRKLQEEDYDAIILAVSGLKRVGLSEELI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L E P+ GQGA+ IE+ ++ + +VK I+ T +V+ ER FL L+G C+ Sbjct: 183 TEYLEPEVCVPAVGQGALAIESREDDEELTNIVKKIHDAYTAKTVSAERTFLHLLEGGCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 I G+AY G + +V DG I E R + +G++AA+ + K + Sbjct: 243 VPIGGYAYLDGDEVVLTALVGDPDGTTILKETVRG---TEPTEVGKEAAELLISQGAKEI 299 Query: 305 FN 306 + Sbjct: 300 VD 301 >gi|304414148|ref|ZP_07395516.1| porphobilinogen deaminase [Candidatus Regiella insecticola LSR1] gi|304283362|gb|EFL91758.1| porphobilinogen deaminase [Candidatus Regiella insecticola LSR1] Length = 312 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 110/293 (37%), Positives = 157/293 (53%), Gaps = 2/293 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K RI TR SPLAL A R SL H P + ++P++T+GD + + L +IGG Sbjct: 1 MSEKVIRIATRQSPLALWQADYVRKSLESHH--PDLQVKLVPITTRGDTLLHTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ D AVHS KD+P GL + R D D F+S + LK Sbjct: 59 KGLFVKELEQALLENCADIAVHSIKDVPIHFPAGLGLVVICQRGDPHDAFVSKNYKHLKQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ + + + V D RG + TRLNKL+ AI+LA AG++RL Sbjct: 119 LPPGSIVGTSSLRRQCQIRKKYPHLIVRDLRGNVGTRLNKLDQGAYQAIILAVAGLQRLD 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ +++ E+ P+ GQGAI IE + + ++L+ +NH T + ERA L Sbjct: 179 LQSRIQHVMSPEESLPAAGQGAIGIECRLEDDVTRQLLAPLNHFPTERRICAERALNIRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 +G C+ I +A +G L V DG R G A IG D A Sbjct: 239 EGGCQVPIGSYAELEGDNLRLRAFVSTPDGSQMIYGERCGLAIQAEKIGLDLA 291 >gi|297568516|ref|YP_003689860.1| porphobilinogen deaminase [Desulfurivibrio alkaliphilus AHT2] gi|296924431|gb|ADH85241.1| porphobilinogen deaminase [Desulfurivibrio alkaliphilus AHT2] Length = 311 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 104/282 (36%), Positives = 161/282 (57%), Gaps = 2/282 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LALA + + + + P ++ ++ + TKGD+I + L ++GGKGL Sbjct: 3 KTIRIGTRASMLALAQSNWIKGRIE--AQYPGCSVELVKIVTKGDKIVDVPLAKVGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+ E+D AVHS KD+P +L +GL I RE D FI++ ++L ++ Sbjct: 61 FVKEIEEALLRREVDIAVHSMKDVPAELPEGLHIGIITEREKPFDAFITNNYKTLAEVPQ 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSSLRRKA L R R D+ + D RG ++TRL KL+ AI+LA AG+ RL Sbjct: 121 GATIGTSSLRRKAQLARLRPDLKIEDLRGNLDTRLRKLDEGVYDAIILAAAGLNRLDLFH 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ P+ QGA+ IE + +++ ++H +T +V+ ER++L L+G Sbjct: 181 RATFCFQPDEMLPAVAQGAVGIELRRADEDLLQMLSFMDHRETTLAVHAERSYLKRLEGG 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA 285 C+ +AGFA G TL G++ + DG + +G A Sbjct: 241 CQVPLAGFATLAGQTLTINGLIASVDGGKMVKAKHSGPAAQA 282 >gi|299822782|ref|ZP_07054668.1| hydroxymethylbilane synthase [Listeria grayi DSM 20601] gi|299816311|gb|EFI83549.1| hydroxymethylbilane synthase [Listeria grayi DSM 20601] Length = 311 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 116/297 (39%), Positives = 166/297 (55%), Gaps = 13/297 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHK-IPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K +G+R S LAL +T + ++ K P + I + TKGD+I + TL+++GGK Sbjct: 2 KSQIIVGSRRSKLAL---VQTNWVINELKKHYPTIDFRIEEMVTKGDKILDVTLSKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF E+E+ L+ ID AVHS KD+P + +GL I+A RE DVF+ DL Sbjct: 59 GLFVSEVEQALVDKHIDFAVHSMKDVPAVIEEGLTIAAIPERESANDVFVFKEVHDFGDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++IGTSSLRR + +L R D+ + RG I+TRL KL AI+LA AG+ R+ Sbjct: 119 PTQAIIGTSSLRRASQILAERPDLQIKFIRGNIDTRLRKLREEDFDAIILAQAGLSRMG- 177 Query: 182 EKVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 + + L I+ P P+ GQGA+ IE + +++++ I+H T + V ERAF Sbjct: 178 -WLEDDSLRIQTIPETICLPAVGQGALAIECREEDNDTKDILRSIHHAITANCVAAERAF 236 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 L L+G C+ IAG+A GS + F G+V DGK E R G DA IG +AA Sbjct: 237 LKTLNGGCEIPIAGYATQSGSKVSFKGLVGTPDGKTIWEAERVGE--DADQIGTEAA 291 >gi|126666605|ref|ZP_01737583.1| porphobilinogen deaminase [Marinobacter sp. ELB17] gi|126628993|gb|EAZ99612.1| porphobilinogen deaminase [Marinobacter sp. ELB17] Length = 313 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 107/295 (36%), Positives = 167/295 (56%), Gaps = 3/295 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L +H + ++ + T GD+I + L ++GG Sbjct: 1 MSARNLRIATRSSALALWQAEFIKAELERLHS--NVTVELVKIKTLGDKILDVPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P +GL + A R+D D FIS+ SL D Sbjct: 59 KGLFVKELEEAMLDGRADLAVHSMKDVPMAFPEGLGLVAICERDDPTDAFISNHFSSLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L++V+GTSSLRR++ L R D+ + RG + TRL KL+ AI+LA +G+KRL Sbjct: 119 LPLNAVVGTSSLRRESQLRANRPDLQIRVLRGNVNTRLAKLDAGNYDAIILASSGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + P+ GQGA+ IE +++ + + +++ +NH D+ D V ERA L Sbjct: 179 FEARIRNCMPDTLSLPAVGQGALGIECRLDDQELRAMLEPLNHTDSADRVKAERALNTRL 238 Query: 241 DGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 +G C+ IA +A + L+ G+V A DG + +R + +GR+ A+ Sbjct: 239 NGGCQVPIAAYALLEDNDMLWLRGLVGAVDGSLIFRAEGRVHRSEGERLGRELAE 293 >gi|254828209|ref|ZP_05232896.1| porphobilinogen deaminase [Listeria monocytogenes FSL N3-165] gi|258600598|gb|EEW13923.1| porphobilinogen deaminase [Listeria monocytogenes FSL N3-165] Length = 309 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 115/283 (40%), Positives = 162/283 (57%), Gaps = 9/283 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L ID AVHS KD+P+ L KGL I A RE D F+ + SL +L Sbjct: 60 LFVSEVEQALSDEAIDFAVHSMKDVPSSLKKGLIIGAIPKRESPLDCFVFNQVNSLDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 120 QGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMG-- 177 Query: 183 KVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + L +ED P P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL Sbjct: 178 WLENTTLKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFL 237 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 +L+G C+ IAGFA + F G+V +DG I E + G Sbjct: 238 KKLNGGCEIPIAGFATRANEFVQFKGLVGNADGSIILESEQVG 280 >gi|110636914|ref|YP_677121.1| hydroxymethylbilane synthase [Cytophaga hutchinsonii ATCC 33406] gi|123163848|sp|Q11XT5|HEM3_CYTH3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|110279595|gb|ABG57781.1| hydroxymethylbilane synthase [Cytophaga hutchinsonii ATCC 33406] Length = 312 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 108/276 (39%), Positives = 165/276 (59%), Gaps = 14/276 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LAL A E ++ + + P ++I T GD+I +++L++IG KGL Sbjct: 3 KTVRIGTRGSKLALWQA-EHVAACLQTKGLEPQIVII---DTTGDKILDQSLSKIGSKGL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH----TAQSLK 119 FTEE+E++L +G ID AVHSAKD+ T L G+ I A RE + DV +SH T ++ Sbjct: 59 FTEELEEQLHAGTIDIAVHSAKDLQTHLKGGMYILAITERELVNDVLVSHKPIDTLKNNP 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL +IGTSS RR+ALL ++ ++D RG ++TR+ K+ A+LLAYAG+ R+ Sbjct: 119 DL----IIGTSSTRRRALLRKFYPQAKMVDMRGNLQTRIRKMEEGACDAMLLAYAGMHRM 174 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIE--THVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + +IKE L++E+F P+ GQG + IE + ++ KA + V+N T +V+ ERAFL Sbjct: 175 GYDSLIKEKLSLEEFIPAAGQGTLAIEAASTLDKEKAAVIRAVLNDAATETAVSAERAFL 234 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 L+G C + A + + G +++ DG + Sbjct: 235 RTLEGGCSIPVFALAVERDTDYLLTGGIVSLDGTKY 270 >gi|91791755|ref|YP_561406.1| porphobilinogen deaminase [Shewanella denitrificans OS217] gi|91713757|gb|ABE53683.1| porphobilinogen deaminase [Shewanella denitrificans OS217] Length = 315 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 106/306 (34%), Positives = 166/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLAL A ++ L +H P ++ ++P++TKGD + + L ++GG Sbjct: 6 MSQHLIRIATRKSPLALWQAEFVKAELERIH--PGLSVELVPMTTKGDVLLDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +L + Sbjct: 64 KGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEIICEREDPRDAFVSNNFANLAE 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + D RG + TRL KL++ AI+LA AG+ RLK Sbjct: 124 LPKGAVVGTSSLRRQCQIRAMRPDLIIKDLRGNVGTRLAKLDSGDYDAIILAAAGLIRLK 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I ++ E+ P+ GQGA+ IE ++ + + L+ + H +T V ERA L Sbjct: 184 LISRIASYISPEESLPANGQGAVGIECRTDDARVKALLAPLEHLETRYRVIAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G L G+V DG G + +A +G A+ + Sbjct: 244 EGGCQVPIGAYAEIEGDELTLRGLVGNPDGSQIITGQVKGLKSEASQLGEQLAEILLAQG 303 Query: 301 NKNVFN 306 K + + Sbjct: 304 AKTILD 309 >gi|125717350|ref|YP_001034483.1| porphobilinogen deaminase [Streptococcus sanguinis SK36] gi|254800260|sp|A3CL78|HEM3_STRSV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|125497267|gb|ABN43933.1| Porphobilinogen deaminase, putative [Streptococcus sanguinis SK36] Length = 306 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 115/309 (37%), Positives = 169/309 (54%), Gaps = 14/309 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122 F +EIE+ L++GEI+ AVHS KDMP KL +G + A RED+RD I A Q+L DL Sbjct: 60 FVKEIERALLAGEINMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179 S+IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KR L Sbjct: 120 KGSLIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ + L P+ QGA+ +E + + L+ + E T V ERA LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELLSLLAAVQDEKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK-IFHEVSRNGNRCDAINIGRDAAQYIRF 298 ++ C IA FA G ++ DG+ IF VS G + A Q +R Sbjct: 240 MNADCTFPIAAFAQKNGQGYQLEAMLAKEDGQCIF--VSLQGQDGQQL-----AEQAVRQ 292 Query: 299 ISNKNVFNF 307 +++K Sbjct: 293 LADKGAVGM 301 >gi|226946767|ref|YP_002801840.1| porphobilinogen deaminase [Azotobacter vinelandii DJ] gi|226721694|gb|ACO80865.1| porphobilinogen deaminase [Azotobacter vinelandii DJ] Length = 314 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 105/270 (38%), Positives = 154/270 (57%), Gaps = 2/270 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGGKGL Sbjct: 5 REIRIATRKSALALWQAEYVKARLEQAH--PGLAVSLVPMVSRGDKLLDAPLAKIGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL +L Sbjct: 63 FVKELETALLENAADIAVHSMKDVPMEFPEGLGLYCICEREDPRDAFVSNAFASLDELPA 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S+IGTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL E Sbjct: 123 GSLIGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEG 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ + I D P+ GQGA+ IE + + Q L+ ++H T V ERA L+G Sbjct: 183 RIRSRIAIADSLPAGGQGAVGIECRSADREIQALLAPLDHAPTALRVGAERALNKRLNGG 242 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 C+ IA +A + L+ G+V DG++ Sbjct: 243 CQVPIACYAELEDGQLWLRGLVGQPDGRLL 272 >gi|87200799|ref|YP_498056.1| porphobilinogen deaminase [Novosphingobium aromaticivorans DSM 12444] gi|87136480|gb|ABD27222.1| porphobilinogen deaminase [Novosphingobium aromaticivorans DSM 12444] Length = 312 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 104/268 (38%), Positives = 154/268 (57%), Gaps = 3/268 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++P ++GTR SPLA+A A E R+ L H + ++P++ GD+I +R L +IGGK Sbjct: 7 QRPLKLGTRRSPLAMAQAEEARARLCAAHGWAESQVELVPVTASGDKIQDRPLADIGGKA 66 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 L+T+E++ L+SGEID AVHS KD+ T + I+A LPR D+RDV I A S+ + Sbjct: 67 LWTKELDAWLVSGEIDFAVHSMKDVETIRPENFAIAAVLPRADVRDVLIG--AASIHAIP 124 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTS+ RR A +L R D++V+ FRG + TRL KL +A LLA AG+ RL E Sbjct: 125 PGARVGTSAPRRAAQMLHARPDLTVVSFRGNVATRLAKLQAGEADVTLLAAAGLGRL-GE 183 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + L+ ++ P+P QGAI IE + + I+ + T ++ ERA L L G Sbjct: 184 TGVGHPLSEYEWLPAPAQGAIGIECLASRADLCAWLGAIDDKPTHHAIRAERALLLALGG 243 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270 +C S IA S+L + + DG Sbjct: 244 NCHSPIAVLTTHHESSLTLRAALFSPDG 271 >gi|153953354|ref|YP_001394119.1| porphobilinogen deaminase [Clostridium kluyveri DSM 555] gi|146346235|gb|EDK32771.1| HemC [Clostridium kluyveri DSM 555] Length = 305 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 115/291 (39%), Positives = 158/291 (54%), Gaps = 6/291 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 FRI TR S LAL L K+ ++I T+GDR + +L +IGGKG+F Sbjct: 18 FRIATRKSKLALVQTDYVIDLLALKFKMQCEKVLI---RTEGDRKLDVSLDKIGGKGVFV 74 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IEK LI AVHS KDMP +LL +I A RED+RDVFIS DL + Sbjct: 75 KDIEKALIEKRAQAAVHSMKDMPNELLDLFEIIAMPVREDVRDVFISPEGIKFLDLPKGA 134 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS+RR + R DI ++ RG IETR+ K+ K I+LA AG+KRL ++I Sbjct: 135 VIGTSSIRRAVQIKNLRHDIEIVPIRGNIETRVRKMKEEKLDGIVLAAAGVKRLGMSEII 194 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E N +F P+ GQGAI +E N+ A L K I++ED V ER+FL +L G C Sbjct: 195 TEYFNPFEFIPAVGQGAIGVEILKNSEYASTLGK-IDNEDIRMGVEAERSFLKKLQGDCH 253 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + ++ +G L GI + I +V G++ D I +G + I Sbjct: 254 TPVGAYSVIEGEILNITGIFQVGNKLIKKDVC--GDKWDYIALGESLGEKI 302 >gi|219853983|ref|YP_002471105.1| hypothetical protein CKR_0640 [Clostridium kluyveri NBRC 12016] gi|254800246|sp|B9DZL6|HEM3_CLOK1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|219567707|dbj|BAH05691.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 290 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 115/291 (39%), Positives = 158/291 (54%), Gaps = 6/291 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 FRI TR S LAL L K+ ++I T+GDR + +L +IGGKG+F Sbjct: 3 FRIATRKSKLALVQTDYVIDLLALKFKMQCEKVLI---RTEGDRKLDVSLDKIGGKGVFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IEK LI AVHS KDMP +LL +I A RED+RDVFIS DL + Sbjct: 60 KDIEKALIEKRAQAAVHSMKDMPNELLDLFEIIAMPVREDVRDVFISPEGIKFLDLPKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS+RR + R DI ++ RG IETR+ K+ K I+LA AG+KRL ++I Sbjct: 120 VIGTSSIRRAVQIKNLRHDIEIVPIRGNIETRVRKMKEEKLDGIVLAAAGVKRLGMSEII 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E N +F P+ GQGAI +E N+ A L K I++ED V ER+FL +L G C Sbjct: 180 TEYFNPFEFIPAVGQGAIGVEILKNSEYASTLGK-IDNEDIRMGVEAERSFLKKLQGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + ++ +G L GI + I +V G++ D I +G + I Sbjct: 239 TPVGAYSVIEGEILNITGIFQVGNKLIKKDVC--GDKWDYIALGESLGEKI 287 >gi|302342250|ref|YP_003806779.1| porphobilinogen deaminase [Desulfarculus baarsii DSM 2075] gi|301638863|gb|ADK84185.1| porphobilinogen deaminase [Desulfarculus baarsii DSM 2075] Length = 310 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 119/299 (39%), Positives = 157/299 (52%), Gaps = 4/299 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPL-STKGDRITNRTLTEIGGKGLFTE 66 I TR S LALA A R + + + P V + L TKGD+I + L ++GGKGLF + Sbjct: 6 IATRGSELALAQA---RWAARQLSALSPGLEVELQLFKTKGDKILDAPLAKVGGKGLFVK 62 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE L+ G AVHS KDMP +L GL I+A RED RDV IS L +L Sbjct: 63 EIEDALLDGRARVAVHSMKDMPAELPPGLCIAAVSRREDPRDVLISRDGLGLDELPATPR 122 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSSLRR+A LL R D V+ RG ++TRL KL AI+LA AG+ RL + Sbjct: 123 LGTSSLRRQAQLLARRPDAMVVSVRGNVQTRLRKLEELGLDAIVLAAAGLDRLGLSDPRR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L E P+ GQGA+ IE ++ EL + H+ T +V ERAFL L+G C+ Sbjct: 183 VDLAPELMLPAVGQGALAIEARADDAFCLELCARLAHQPTAVAVEAERAFLGRLEGGCQV 242 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IAG A G + F G+V + DGK G +A +G A+ I + + Sbjct: 243 PIAGHAVVDGDEIVFEGLVASLDGKRLIRRRAVGRADEAGPLGLAVAEEILADGGRQIL 301 >gi|329898164|ref|ZP_08272361.1| Porphobilinogen deaminase [gamma proteobacterium IMCC3088] gi|328920873|gb|EGG28310.1| Porphobilinogen deaminase [gamma proteobacterium IMCC3088] Length = 307 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 106/286 (37%), Positives = 159/286 (55%), Gaps = 2/286 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR SPLAL A + +L H P + ++ ++++GD++ + L +IGGKGLF +E Sbjct: 6 IATRESPLALWQAHYVKDALEMAH--PGLAVELLGMTSRGDQLLDSPLAKIGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L+ G D AVHS KD+P +GL + RE D F+S+T +S+ L +++ Sbjct: 64 LETALLEGRADIAVHSMKDVPMSFPEGLCLGPICEREAPNDAFVSNTYESIDALPKGAIV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+ L +R D+ V RG + TRL KL++ + AI+LA AG+ E I+ Sbjct: 124 GTSSLRRECQLRSYRPDLVVNFLRGNVNTRLAKLDDGQYDAIILAAAGLILFGFEDRIRS 183 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 L E P+ GQGA+ IE ++ ++L++V++H T V ERA L+G C+ Sbjct: 184 RLTPEQSLPAGGQGAVGIELRSDDEPTRDLIQVLHHPKTAAEVTAERALNQTLNGGCQVP 243 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 IA F +G TL+ G+V A DG G DA +G+ A Sbjct: 244 IAAFCVTEGDTLWLRGLVGAVDGSSILRAEARGKVEDAEVLGQQVA 289 >gi|224499785|ref|ZP_03668134.1| porphobilinogen deaminase [Listeria monocytogenes Finland 1988] Length = 309 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 114/283 (40%), Positives = 162/283 (57%), Gaps = 9/283 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L Sbjct: 60 LFVSEVEQALSDEAIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNQVNSLDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 120 QGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMG-- 177 Query: 183 KVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + L +ED P P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL Sbjct: 178 WLENTTLKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFL 237 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 +L+G C+ IAGFA + F G+V +DG I E + G Sbjct: 238 KKLNGGCEIPIAGFATRANEVVQFKGLVGNADGSIILESEQVG 280 >gi|215434281|gb|ACJ66828.1| porphobilinogen deaminase [uncultured bacterium pSY1435] Length = 310 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 105/300 (35%), Positives = 153/300 (51%), Gaps = 1/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LAL A R L+ + ++ ++T+GDRI +R L E+GGKGLF Sbjct: 7 LRLGTRASALALWQARHVRDRLL-ARWGAAIEVELVEITTEGDRIIDRPLNEVGGKGLFV 65 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 IE +L+ ID AVHS KD+P GL I R D RDV + +L L + Sbjct: 66 TGIEDRLLDRSIDFAVHSMKDLPGHTPDGLAIVCTPERADARDVLVGRAGSTLVRLPAGT 125 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR AL R I VI RG + TR+ K+ + +LLA AG++RL+ + + Sbjct: 126 RVGTSSLRRAALARRINPGIEVIAIRGNVPTRIAKIADGVCDVVLLAAAGLERLELAQHV 185 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ E F P+ QG + IE ++ + EL+ + H DT ER FLA L+G C+ Sbjct: 186 AEYLDPESFCPAACQGILAIEARADDRRVHELLAPLEHADTATLAAAERGFLARLEGGCQ 245 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A A L+ G+V+ G+ + G A +GR A+ + + + Sbjct: 246 VPMACHARLDAGVLHVRGLVVGIGGEPLFDAREQGEPSAAAQLGRTVAEQLLVLGAAEIL 305 >gi|320529107|ref|ZP_08030199.1| porphobilinogen deaminase [Selenomonas artemidis F0399] gi|320138737|gb|EFW30627.1| porphobilinogen deaminase [Selenomonas artemidis F0399] Length = 311 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 107/306 (34%), Positives = 166/306 (54%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M IGTR S LAL A L H P +V+ ++TKGD+I + L +IGG Sbjct: 1 MNSGTITIGTRASKLALWQAKFVAGELQKRH--PSVTVVLKEMTTKGDKILDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ +++G+ID AVHS KDMPT++ GL I A R D D F+S+ ++++ Sbjct: 59 KGLFTKELEQAMLAGDIDIAVHSLKDMPTEIPAGLIIGAITARLDPGDAFVSNQYAAIEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+A LL R D+ ++D RG + TRL KL+ + A++LA AG++RL Sbjct: 119 LPAGARVGTSSLRRRAQLLAVRPDLVLLDLRGNVNTRLEKLDAGEFDAVVLAAAGLRRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ +L P+ GQGA+ IE ++ + + + D + ERAFL + Sbjct: 179 LGDRIRSVLPRAMMLPAVGQGALAIECRADDAEICAAIGFMCDADMTAAAAAERAFLGRV 238 Query: 241 DGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ + +A G LY ++ + DG +G A IG A+ + + Sbjct: 239 EGGCQIPVGVYAEIGDGDMLYVDAMIASVDGMRVCRSRASGRPAQAAQIGVALAEELLDM 298 Query: 300 SNKNVF 305 + + Sbjct: 299 GGREIL 304 >gi|33593520|ref|NP_881164.1| porphobilinogen deaminase [Bordetella pertussis Tohama I] gi|39931430|sp|Q7VVU9|HEM3_BORPE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|33572876|emb|CAE42812.1| porphobilinogen deaminase [Bordetella pertussis Tohama I] gi|332382928|gb|AEE67775.1| porphobilinogen deaminase [Bordetella pertussis CS] Length = 314 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 109/287 (37%), Positives = 156/287 (54%), Gaps = 2/287 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A R L + P ++ ++ L+T+GD+I +RTL+++GGKGLF +E Sbjct: 9 IATRASRLALWQAEHVRDLLR--ARYPACSVELLTLTTRGDQILDRTLSKVGGKGLFVKE 66 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L+ G D AVHS KD+P L ++S L R D RD F+S+ SL DL + + Sbjct: 67 LETALLDGRADLAVHSLKDVPVDLHAPFELSCVLERADPRDAFVSNDYGSLADLPPGAAV 126 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR++ + + V RG ++TRL KL+N AI+LA AG++RL I+ Sbjct: 127 GTSSLRRESQIRARYPHLVVKPLRGNLDTRLGKLDNGDYAAIVLAAAGLERLGLAARIRA 186 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L +D P+ GQGA+ IE + ++ + T V ERA L GSC+ Sbjct: 187 LLEPDDSLPAAGQGALGIEILQGRADVRAMLAPLGDAATLACVTAERAVSRMLGGSCQVP 246 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 +A +A G L +V A DG+ R G R A IG AA+ Sbjct: 247 LAAYARIDGDELALRALVAAPDGRRIVRAERRGPRDQAQAIGESAAR 293 >gi|261405370|ref|YP_003241611.1| porphobilinogen deaminase [Paenibacillus sp. Y412MC10] gi|329928511|ref|ZP_08282379.1| hydroxymethylbilane synthase [Paenibacillus sp. HGF5] gi|261281833|gb|ACX63804.1| porphobilinogen deaminase [Paenibacillus sp. Y412MC10] gi|328937770|gb|EGG34178.1| hydroxymethylbilane synthase [Paenibacillus sp. HGF5] Length = 318 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 109/293 (37%), Positives = 164/293 (55%), Gaps = 12/293 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + L + K ++ + + TKGDRI + TL+++GGKGLF Sbjct: 6 VGSRQSALALTQTGQVIDDLKRLAKEHGLEYDFAVKKIVTKGDRILDVTLSKVGGKGLFV 65 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ +I GEID AVHS KDMP+ L +GL A R+D RD IS +L DL + Sbjct: 66 KEIEQAMIDGEIDMAVHSMKDMPSVLPEGLVSGAVPARKDPRDCLISKEGTTLDDLPQGA 125 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR + L +R D+ + RG I++R+ K+ + AI+LA AG++R+ E I Sbjct: 126 KVGTSSLRRSSQLKAYRPDLQIDWIRGNIDSRIRKMEEGEFQAIILATAGLQRMGWEDRI 185 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L +E P+ GQGA+ IE N+ + L+ + N E T +V ER FL+EL+G C+ Sbjct: 186 TSYLPVEVSLPAVGQGALGIECRENDEELLHLLSLYNDEVTARTVAAERKFLSELNGGCQ 245 Query: 246 SAIAGFAYCKG----------STLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 I +A K + + G+V + DG+I + S G +A+ + Sbjct: 246 VPIGAYAVMKNVEAGDSRGEQNVIQLTGMVGSPDGEIVLKESAEGTDPEALGV 298 >gi|317122098|ref|YP_004102101.1| porphobilinogen deaminase [Thermaerobacter marianensis DSM 12885] gi|315592078|gb|ADU51374.1| porphobilinogen deaminase [Thermaerobacter marianensis DSM 12885] Length = 335 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 110/317 (34%), Positives = 168/317 (52%), Gaps = 19/317 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A L H P + ++P++T GDR R L + G F Sbjct: 6 VRIGTRASALARIQAQWVARELQRHH--PGLQVELVPVTTHGDRHRARPLYTLDTPGAFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ--------- 116 +E+E+ L +G ID AVHSAKD+PT+L +GL+++A+ RED D + +Q Sbjct: 64 KELEEALRAGIIDLAVHSAKDVPTRLPEGLELAAFPQREDPGDALVLPRSQEGLGPNGRD 123 Query: 117 --------SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA 168 +L+ L + +GTSSLRR+A L R D+ V RG ++TRL +L+ A Sbjct: 124 AGRGAGMTALELLPPGARVGTSSLRRQAWLRARRPDLKVEPARGNLDTRLRRLDEGAWDA 183 Query: 169 ILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD 228 ++LA AG++RL I + P+PGQGA+ +E ++ + LV+V++ + Sbjct: 184 LVLAAAGLRRLGVGHRITAAIPPRALLPAPGQGALAVEIRASDDATRRLVQVLDRPEVAL 243 Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 +V ERAFLAEL G+C+ + +A +G L G+V A DG + E G D + Sbjct: 244 AVRAERAFLAELGGTCRIPLGAWARLEGPRLRLAGMVAAPDGDPWLEEEVEGPATDPEAV 303 Query: 289 GRDAAQYIRFISNKNVF 305 GR+ A+ +R ++V Sbjct: 304 GRELAERLRARGAESVL 320 >gi|315125211|ref|YP_004067214.1| porphobilinogen deaminase [Pseudoalteromonas sp. SM9913] gi|315013724|gb|ADT67062.1| porphobilinogen deaminase [Pseudoalteromonas sp. SM9913] Length = 312 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 105/293 (35%), Positives = 165/293 (56%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RI TR S LAL A ++ L H + ++P+ST+GD I + L +IGGKGL Sbjct: 6 KLVRIATRKSALALWQAEFVKAQLEHFHD--DVRVELVPMSTQGDIILDTPLAKIGGKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ ++ G D AVHS KD+P + L++ RED RD F+S+ ++ L Sbjct: 64 FVKELEQAMLDGRADIAVHSMKDVPVEFPDDLELHVICEREDPRDAFVSNNFANIDALPQ 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+ + R D+ + D RG + TRL KL++ + AI+LA AG+ RL+ + Sbjct: 124 GAIVGTSSLRRQCQIRALRPDLEIRDLRGNVNTRLAKLDSGQYDAIILAAAGLIRLEMGE 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I++ + E P+ GQGA+ IE +N+ + L+ + H +T VN ERA L+G Sbjct: 184 RIRDFIEPEVSLPANGQGAVGIECRINDEVTKALLAPLEHSETRIRVNAERAMNRHLEGG 243 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ I +A G ++ G+V A DG +G+ DA +G + A+ + Sbjct: 244 CQVPIGAYALVDGEQVHLRGLVGAIDGSEILRDEISGHVDDAEKLGVELAKKL 296 >gi|224826001|ref|ZP_03699104.1| porphobilinogen deaminase [Lutiella nitroferrum 2002] gi|224601638|gb|EEG07818.1| porphobilinogen deaminase [Lutiella nitroferrum 2002] Length = 311 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 165/289 (57%), Gaps = 2/289 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A ++ L ++ P + I+ ++T+GD+I ++TL++IGGKGLF +E Sbjct: 6 IASRESKLAMWQAEHIKARLEQLY--PQLAVEILGMTTQGDQILDKTLSKIGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L +G ++A RED RD F+S+T SL +L +V+ Sbjct: 64 LELALQEGRADLAVHSIKDVPMNLPEGFALAAICEREDPRDAFVSNTYASLSELPDGAVV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR++ L +++ RG ++TRL KL++ + AI+LA AG+KRL+ I+ Sbjct: 124 GTSSLRRESQLRARFPRLTIKPLRGNVQTRLRKLDDGEFDAIILAAAGLKRLELSARIRC 183 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 L + P+ GQGA+ IE + +L+ ++H DT V+ ERA L GSC+ Sbjct: 184 ELAPSESLPAVGQGALGIEIRADRADLMQLLAPLDHADTHACVSAERALSRVLGGSCQIP 243 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + GFA + G V DG + S + R A +GR AQ + Sbjct: 244 LGGFATLSDDVITLGGFVAHPDGSVMLTASASAPREYADALGRAVAQKL 292 >gi|15892629|ref|NP_360343.1| porphobilinogen deaminase [Rickettsia conorii str. Malish 7] gi|20138263|sp|Q92HR5|HEM3_RICCN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|15619798|gb|AAL03244.1| porphobilinogen deaminase [Rickettsia conorii str. Malish 7] Length = 351 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 111/294 (37%), Positives = 165/294 (56%), Gaps = 24/294 (8%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR SPLAL H T + + + P N I+P+ T GD I N+ L +IGGK LF Sbjct: 5 IRIGTRKSPLALIH---TNLVIQQIKQFFPDINCEIVPIITSGDLIQNKPLYDIGGKALF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L + Sbjct: 62 LKEIEQALLDKKIDLAVHSLKDVPGRMPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQN 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL Sbjct: 122 AVIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRL----- 176 Query: 185 IKEILNIE--------DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 E+ N E P GQG I +E ++ E+ INH T++ + ERAF Sbjct: 177 --EVFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAF 234 Query: 237 LAELDGSCKSAIAGFA-YCKGSTLYF----YGIVLASDGKIFHEVSRNGNRCDA 285 L LD +C++ IA ++ Y + + Y VL + + + NR DA Sbjct: 235 LEYLDANCRTPIAAYSQYLDANPRHLSKLAYREVLEGNTEALATAAYKSNRTDA 288 >gi|157803668|ref|YP_001492217.1| porphobilinogen deaminase [Rickettsia canadensis str. McKiel] gi|166217783|sp|A8EYJ9|HEM3_RICCK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157784931|gb|ABV73432.1| porphobilinogen deaminase [Rickettsia canadensis str. McKiel] Length = 301 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 100/249 (40%), Positives = 153/249 (61%), Gaps = 5/249 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK-IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR SPLAL +T + + + +P N I+P++T GD I N+ L +IGGK LF Sbjct: 5 IRIGTRKSPLAL---IQTNLVIQQIKQFVPDINYKIVPITTSGDLIQNKPLYDIGGKALF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L + Sbjct: 62 LKEIEQALLDKKIDLAVHSLKDVPGRIPEDLIIAAVLEREDPRDVFVCLKYKSIEELPQN 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-EK 183 ++IG+S++RRK + + RSD+ V FRG +++R+ KL N + A +LAYAG+KRL Sbjct: 122 AIIGSSAVRRKTFIEKIRSDLKVTVFRGNVDSRIKKLMNGEVDATILAYAGLKRLNAFNP 181 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ P GQG I +E ++ E INH T++ + ERAFL LD + Sbjct: 182 QYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLETCNQINHLTTFELIKPERAFLEYLDAN 241 Query: 244 CKSAIAGFA 252 C++ IA ++ Sbjct: 242 CRTPIAAYS 250 >gi|307720830|ref|YP_003891970.1| hydroxymethylbilane synthase [Sulfurimonas autotrophica DSM 16294] gi|306978923|gb|ADN08958.1| hydroxymethylbilane synthase [Sulfurimonas autotrophica DSM 16294] Length = 319 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 107/300 (35%), Positives = 174/300 (58%), Gaps = 6/300 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL A+ + + +V+ P +V+ + + GD++ ++ L IGGKG Sbjct: 2 KKLTIATRVSDLALWQAYHIKERV-EVN-YPEIEVVLNKIVSNGDKVLDKPLALIGGKGH 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E ++++G + AVHS KD+PT + GL++ A R+D DVF+SHT +L DL Sbjct: 60 FTKELEDEMLAGNAELAVHSLKDVPTYIPDGLELVAVTQRQDQSDVFLSHTYATLDDLPK 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GT+SLRR+ LL+ R D+ V D RG + TRL KL + AI+LA+ G+ RL K Sbjct: 120 GAVVGTTSLRRRMQLLQKRPDLKVKDLRGNVNTRLRKLKEGQYDAIILAWIGLNRLDLLK 179 Query: 184 VI--KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I + L+++ P GQ A+ IE +N K +E+ K +N EDT+ ER F++++ Sbjct: 180 DIPYTQKLSLDMMIPPMGQAALGIEIISDNEKVREIAKSLNDEDTFTCTQIERDFISKIG 239 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C + +A A G + F ++ DG + ++ ++ N+G++ AQ + I+N Sbjct: 240 AGCSAPVACNAVIDGDNVVFRTMIGFPDGTNIMQKKVVKSKNESENLGKELAQ--KMINN 297 >gi|67459209|ref|YP_246833.1| porphobilinogen deaminase [Rickettsia felis URRWXCal2] gi|75536359|sp|Q4ULA5|HEM3_RICFE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|67004742|gb|AAY61668.1| Porphobilinogen deaminase [Rickettsia felis URRWXCal2] Length = 301 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 102/249 (40%), Positives = 153/249 (61%), Gaps = 5/249 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR SPLAL +T + + + P N I+P+ T GD I N+ L +IGGK LF Sbjct: 5 IRIGTRKSPLAL---IQTNLVIQQIKQFFPDINCEIVPIITSGDLIQNKPLYDIGGKALF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L + Sbjct: 62 LKEIEQALLDKKIDLAVHSLKDVPGRIPEELVIAAILEREDPRDVFVCLNYKSIEELPQN 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-EK 183 +VIG+S++RRKA + + RSD+ V FRG I++R+ KL + A +LAYAG+KRL+ Sbjct: 122 AVIGSSAVRRKAFIQKIRSDLKVTVFRGNIDSRIKKLMTAEVDATILAYAGLKRLRAFNP 181 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ P GQG I +E ++ E+ INH T++ + ERAFL LD + Sbjct: 182 EYCHLIEYSQMLPCIGQGVIAVEIRQDDNAMLEICNQINHLPTFELIKPERAFLEYLDAN 241 Query: 244 CKSAIAGFA 252 C++ IA ++ Sbjct: 242 CRTPIAAYS 250 >gi|15615608|ref|NP_243912.1| porphobilinogen deaminase [Bacillus halodurans C-125] gi|11386834|sp|Q9K8G0|HEM3_BACHD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|10175668|dbj|BAB06765.1| porphobilinogen deaminase [Bacillus halodurans C-125] Length = 311 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 115/302 (38%), Positives = 168/302 (55%), Gaps = 8/302 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL S L + P + I + TKGD+I + TL+++GGKGLF +E Sbjct: 6 IGSRRSQLALTQTEWVISKLKEAG--APFDFEIKKIITKGDQILDVTLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ + + EID AVHS KD+P+ L +G + A R D RD IS+ +L +L S++ Sbjct: 64 IEQAMANKEIDIAVHSMKDVPSVLQEGFALGATTTRVDPRDALISNEGYTLAELPAGSIV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L R D+ V RG IETRL KL AI+LA AG++R+ +++ Sbjct: 124 GTSSLRRSAQILAKRPDLEVKWIRGNIETRLRKLKEEDFDAIILAAAGLERMGWSNEIVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E L+ + P+ GQGA+ IE ++ + E++K IN + T +V ER FL ++G C+ Sbjct: 184 EYLDPDLCVPAVGQGALGIECRADDDEVLEMLKTINDDTTAKTVLAERTFLHRMEGGCQV 243 Query: 247 AIAGFA-YCKGSTLYFYGIVLASDG-KIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 IAG+A + +V DG +IF E+ R D + +G AQ + K V Sbjct: 244 PIAGYATLTDEGEIELTALVGTPDGEQIFKEILRGK---DPVQLGETMAQALMDQGAKEV 300 Query: 305 FN 306 Sbjct: 301 LE 302 >gi|239827917|ref|YP_002950541.1| porphobilinogen deaminase [Geobacillus sp. WCH70] gi|259647799|sp|C5D5K7|HEM3_GEOSW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|239808210|gb|ACS25275.1| porphobilinogen deaminase [Geobacillus sp. WCH70] Length = 311 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 110/291 (37%), Positives = 168/291 (57%), Gaps = 6/291 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL L + P + + TKGD+I + TL+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQTNWVIERLRQLG--APFEFEVKEIVTKGDKIIDVTLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE +++GEID AVHS KDMP L GL I PRED DV IS ++ +L +++ Sbjct: 64 IEHAMLNGEIDMAVHSMKDMPAVLPDGLIIGCVPPREDHHDVLISKNKETFANLPSGAIV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-VIK 186 GTSSLRR A +L R D+ + RG I+TRL KL N AI+LA AG+ R+ + VI Sbjct: 124 GTSSLRRSAQILAKRPDLKIKWIRGNIDTRLAKLQNEDYDAIILAAAGLVRMGWARDVIT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E L+ + P+ GQGA+ +E N+ + +E ++ +N T +V ER FL +++G C+ Sbjct: 184 EYLSTDVCLPAVGQGALAVECRENDEELREWLQKLNDVHTERAVLAERVFLQQMEGGCQV 243 Query: 247 AIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 IAG+AY + +V + DGK ++ + +G+ + +G +AA+ + Sbjct: 244 PIAGYAYIDDREDIVLTALVASPDGKEIYKETVSGSNPE--EVGTNAAKML 292 >gi|308070414|ref|YP_003872019.1| Porphobilinogen deaminase [Paenibacillus polymyxa E681] gi|305859693|gb|ADM71481.1| Porphobilinogen deaminase [Paenibacillus polymyxa E681] Length = 308 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 109/282 (38%), Positives = 163/282 (57%), Gaps = 14/282 (4%) Query: 8 IGTRCSPLAL---AHAFETRSSL-----MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 +G+R S LAL H E ++L MD+ V+ + TKGDRI + TL+++G Sbjct: 6 VGSRQSALALTQTGHVIEDLNALCAEQGMDLQ------FVVKKILTKGDRILDVTLSKVG 59 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +EIE+ +++GEID AVHS KDMP++L +GL A RED RD I+ A+SL+ Sbjct: 60 GKGLFVKEIEQAMLAGEIDMAVHSMKDMPSELPEGLVNGAVPHREDPRDCLITLGAKSLE 119 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL + +GTSSLRR + + R D+ + RG I++RL KL AI+LA AG+ R+ Sbjct: 120 DLPQGAKVGTSSLRRASQIKSMRPDLQLEPVRGNIDSRLKKLETEGFDAIILAAAGLHRM 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 ++ I + D P+ GQGA+ IE ++ + L+++ N DT +V ER FL Sbjct: 180 GWKERITSYIPEADCLPAVGQGALGIECRASDEELLALLRLYNDRDTSATVAAERTFLGV 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281 L+G C+ I A G + G+V + DG++ + + GN Sbjct: 240 LNGGCQVPIGAHAVWAGQEISLTGMVGSPDGEVILKETLQGN 281 >gi|114321817|ref|YP_743500.1| hydroxymethylbilane synthase [Alkalilimnicola ehrlichii MLHE-1] gi|122310751|sp|Q0A577|HEM3_ALHEH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|114228211|gb|ABI58010.1| hydroxymethylbilane synthase [Alkalilimnicola ehrlichii MLHE-1] Length = 308 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 103/271 (38%), Positives = 154/271 (56%), Gaps = 2/271 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A + L H P + ++P+ T+GDRI ++ L+ IGG Sbjct: 1 MPQDKLRIATRRSPLAMWQAEHVAAELRRHH--PGLEVELVPMVTRGDRILDQALSRIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ + G D AVHS KD+P ++ G + L R + D F+S+ + L D Sbjct: 59 KGLFIKELEQGMEEGRADLAVHSMKDVPWRMPDGFALPVILERHEPTDAFVSNHYRRLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +GT+SLRR+ R D+ V RG + TRL KL+ + AI+LA +G+ RL Sbjct: 119 LPEGGHLGTASLRRQCQAKARRPDLRVSTLRGNVNTRLAKLDAGEFDAIILAASGLSRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I L E+ P+ GQGA+ IE + + QELV ++H T + ERA A L Sbjct: 179 FDERIARRLPPEESLPAVGQGALGIECLAEDRRVQELVAPLDHGPTHTLLKAERAMNARL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 GSC+ IAG+A +G ++ G+V + DG+ Sbjct: 239 QGSCQVPIAGYACYQGEEIWLRGLVGSPDGQ 269 >gi|260893122|ref|YP_003239219.1| porphobilinogen deaminase [Ammonifex degensii KC4] gi|260865263|gb|ACX52369.1| porphobilinogen deaminase [Ammonifex degensii KC4] Length = 308 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 108/270 (40%), Positives = 157/270 (58%), Gaps = 3/270 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ RIGTR S LALA + L + + P + I+ + T GD++ N L IGGKG Sbjct: 5 KRCLRIGTRGSDLALAQTEQVLQILRE--RWPHYTYEIVKIKTTGDKVRNLALPRIGGKG 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E L+ +ID AVHS KD+PT+L + L + A LPRE DV IS T L+DL Sbjct: 63 LFTKELEVALLEEKIDLAVHSLKDLPTELPEELCVGAVLPREHPGDVLISLTGAGLEDLP 122 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IGTSSLRR+A L R D++ + RG + TRL KL + A++LA+AG++RL+ + Sbjct: 123 EGARIGTSSLRRQAQLKAARPDLNFVPLRGNVPTRLRKLEKGECEAVVLAWAGLRRLRLD 182 Query: 183 KVIK-EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + +L + P+ QGAI +E + + +++V+V++ T V ERAFL L Sbjct: 183 LTGRMTLLPYQVCLPAVAQGAIGVEMRKEDRELRKMVEVLDDPTTRLEVTAERAFLRWLG 242 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 G C IA A G+ + G+V +GK Sbjct: 243 GGCHVPIAALARVAGAEILLEGLVADPEGK 272 >gi|218437216|ref|YP_002375545.1| porphobilinogen deaminase [Cyanothece sp. PCC 7424] gi|218169944|gb|ACK68677.1| porphobilinogen deaminase [Cyanothece sp. PCC 7424] Length = 320 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 111/297 (37%), Positives = 161/297 (54%), Gaps = 5/297 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + + L H P + +ST+GD+I + L +IG KGL Sbjct: 8 RTVRIGSRKSQLALVQTYWVQEQLQKHH--PDRQFEVETMSTQGDKILDVALAKIGDKGL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120 FT+E+E ++ G+ D AVHS KD+PTKL GL + R D D + H + ++ Sbjct: 66 FTKELEVSMLEGQTDLAVHSLKDLPTKLPDGLMLGCITERVDPADGLVVNEKHKDKQIET 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG+ RL Sbjct: 126 LPEGAVIGTSSLRRLAQLRYHFPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLTRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ + + GQGA+ IE +P+ EL+KV+ H+ T D ER+FL EL Sbjct: 186 MSDRIHQVIPSDISLHAVGQGALGIECRTEDPEILELLKVLEHQPTRDRCYAERSFLREL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +G C+ I G TL G+V + DGK + + G DA +G+D A +R Sbjct: 246 EGGCQVPIGVNTSVDGDTLTLTGMVASLDGKKLIKDTITGKTTDAEQLGKDLAIRVR 302 >gi|258514534|ref|YP_003190756.1| porphobilinogen deaminase [Desulfotomaculum acetoxidans DSM 771] gi|257778239|gb|ACV62133.1| porphobilinogen deaminase [Desulfotomaculum acetoxidans DSM 771] Length = 309 Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 106/264 (40%), Positives = 153/264 (57%), Gaps = 2/264 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LAL A L + + P ++ I + T GD I + L +IG KGLFT+E Sbjct: 6 VGTRDSQLALWQANWVVDRLRE--RNPGYSFRIQGIKTHGDNILDVALAKIGDKGLFTKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L+S EID AVHS KD+PT L GL + A RE DV +S L L +VI Sbjct: 64 LEVALLSDEIDLAVHSMKDLPTDLPGGLAVGAVCEREYPGDVLVSSQGYVLDKLPEGAVI 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR A LL +R D+ +++ RG + TRL K++ K ++LAYAGI+RL + I E Sbjct: 124 GTSSLRRTAQLLHYRQDLRIVNIRGNLNTRLRKMDEEKLDGVVLAYAGIQRLGLKDRITE 183 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + +E P+ GQG+I IE + + ++V+ I H + +V+ ER FL L+G C+ Sbjct: 184 RIPMEICLPAVGQGSIGIEIRHLDEEIMDIVETIEHRPSRIAVSAERNFLKRLEGGCQVP 243 Query: 248 IAGFAYCKGSTLYFYGIVLASDGK 271 I + G+ + F G++ + DGK Sbjct: 244 IGAYGLVIGNEIKFEGLIASLDGK 267 >gi|254508818|ref|ZP_05120929.1| porphobilinogen deaminase [Vibrio parahaemolyticus 16] gi|219548275|gb|EED25289.1| porphobilinogen deaminase [Vibrio parahaemolyticus 16] Length = 271 Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 95/247 (38%), Positives = 146/247 (59%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 + TKGD I + L ++GGKGLF +E+E ++ G D AVHS KD+P +GL + Sbjct: 1 MVTKGDIILDTPLAKVGGKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICE 60 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 RED RD F+S+T ++ +L +V+GT SLRR+ + +R D+ + + RG + TRL KL+ Sbjct: 61 REDPRDAFVSNTYNNIDELPHGAVVGTCSLRRQCQIKEYRPDLVIKELRGNVGTRLGKLD 120 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 + AI+LA AG+KRL+ E+ I+ + E P+ GQGA+ IE +++ + +L++ +N Sbjct: 121 AGEYDAIILAAAGLKRLELEERIRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLN 180 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 H+DT D V CERA L+G C+ I +A G ++ +V DG G R Sbjct: 181 HQDTADRVLCERAMNLTLEGGCQVPIGSYALLDGDEIWLRALVGEPDGSEIVRGEIKGAR 240 Query: 283 CDAINIG 289 DA N+G Sbjct: 241 ADAENLG 247 >gi|225677334|ref|ZP_03788309.1| porphobilinogen deaminase [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590620|gb|EEH11872.1| porphobilinogen deaminase [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 292 Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 110/291 (37%), Positives = 161/291 (55%), Gaps = 6/291 (2%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +IGTR S LA+A A E + L+D P +I I+ + T GD+ N L EIGGKGLF + Sbjct: 4 KIGTRGSKLAVAQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFIK 61 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE +L+ ID AVHS KD+P GL I L R D FISH SL+ L ++ Sbjct: 62 EIEAELLENNIDMAVHSLKDVPAFFSGGLTIPCVLERLSPCDAFISHKHNSLESLPQQAI 121 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 I TS++RRK LL +R D++++ RG + TR L N I+LA AG+ RL+K +I Sbjct: 122 IATSAIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLIT 178 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E+L + + GQGAICI+ N+ K +L++ IN+ ++ V ER+F+ ++ SC + Sbjct: 179 EVLPPKVMLSAVGQGAICIQCRRNDVKIIDLLEKINNNMSFIRVKSERSFMKTVNASCFT 238 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +A A + +LA + I+ R DA +G DA ++ Sbjct: 239 PLAALAEYVSENMLHLRCMLADEKNIYF-TERTSFIEDAEKMGMDAGLELK 288 >gi|16803596|ref|NP_465081.1| porphobilinogen deaminase [Listeria monocytogenes EGD-e] gi|47096721|ref|ZP_00234306.1| porphobilinogen deaminase [Listeria monocytogenes str. 1/2a F6854] gi|224501504|ref|ZP_03669811.1| porphobilinogen deaminase [Listeria monocytogenes FSL R2-561] gi|254831957|ref|ZP_05236612.1| porphobilinogen deaminase [Listeria monocytogenes 10403S] gi|254898277|ref|ZP_05258201.1| porphobilinogen deaminase [Listeria monocytogenes J0161] gi|254912230|ref|ZP_05262242.1| porphobilinogen deaminase [Listeria monocytogenes J2818] gi|254936558|ref|ZP_05268255.1| porphobilinogen deaminase [Listeria monocytogenes F6900] gi|284801947|ref|YP_003413812.1| porphobilinogen deaminase [Listeria monocytogenes 08-5578] gi|284995089|ref|YP_003416857.1| porphobilinogen deaminase [Listeria monocytogenes 08-5923] gi|23821694|sp|Q8Y6X5|HEM3_LISMO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|16410985|emb|CAC99634.1| hemC [Listeria monocytogenes EGD-e] gi|47014905|gb|EAL05853.1| porphobilinogen deaminase [Listeria monocytogenes str. 1/2a F6854] gi|258609152|gb|EEW21760.1| porphobilinogen deaminase [Listeria monocytogenes F6900] gi|284057509|gb|ADB68450.1| porphobilinogen deaminase [Listeria monocytogenes 08-5578] gi|284060556|gb|ADB71495.1| porphobilinogen deaminase [Listeria monocytogenes 08-5923] gi|293590205|gb|EFF98539.1| porphobilinogen deaminase [Listeria monocytogenes J2818] Length = 309 Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 114/283 (40%), Positives = 162/283 (57%), Gaps = 9/283 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L Sbjct: 60 LFVSEVEQALSDEAIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNQVNSLDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 120 QGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMG-- 177 Query: 183 KVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + L +ED P P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL Sbjct: 178 WLENTTLKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFL 237 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 +L+G C+ IAGFA + F G+V +DG I E + G Sbjct: 238 KKLNGGCEIPIAGFATRANEFVQFKGLVGNADGSIILESEQVG 280 >gi|116872985|ref|YP_849766.1| porphobilinogen deaminase [Listeria welshimeri serovar 6b str. SLCC5334] gi|123466350|sp|A0AJ05|HEM3_LISW6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|116741863|emb|CAK20987.1| porphobilinogen deaminase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 309 Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 119/312 (38%), Positives = 175/312 (56%), Gaps = 16/312 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKEQY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L + ID AVHS KD+P+ L +GL I A RE D F+ + SL DL Sbjct: 60 LFVSEVEQALSNSTIDFAVHSMKDVPSSLEEGLVIGAIPKRESPLDCFVFNQVSSLDDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL+ R D ++ RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 120 KGAIVGTSSLRRAAQLLKHRPDFNIRPIRGNIDTRLQKLHVENFDAIILAKAGLARMG-- 177 Query: 183 KVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + L +ED P+ GQGA+ IE ++ ++++ I+HE+T V ER FL Sbjct: 178 WLENTTLKLEDIAPEVCLPAVGQGALAIECRESDQLIRDMLATIHHEETGICVEAERVFL 237 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG-KIFH--EVSRN----GNRCDAINIGR 290 +L+G C+ IAGFA G ++F G+V +DG KI E+ N GN+ + + Sbjct: 238 KKLNGGCEIPIAGFATKIGEQIHFKGLVGNADGSKILESKEIGENPGQIGNKVAEVLLSE 297 Query: 291 DAAQYIRFISNK 302 A I + NK Sbjct: 298 GAETIIEELRNK 309 >gi|329114337|ref|ZP_08243099.1| Porphobilinogen deaminase [Acetobacter pomorum DM001] gi|326696413|gb|EGE48092.1| Porphobilinogen deaminase [Acetobacter pomorum DM001] Length = 406 Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 118/322 (36%), Positives = 169/322 (52%), Gaps = 25/322 (7%) Query: 5 PFRIGTRCSPLALAH--AFETRSS-----LMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57 P R+GTR SPLAL AF T + L D+ H I +T GD++ NR L E Sbjct: 88 PLRVGTRGSPLALVQTRAFLTTLTRFCPVLRDMGAFQEHQI-----NTTGDQVQNRRLAE 142 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI--SHTA 115 IGGKGLF +EI + L G ID AVHS KD+ T L GL ++ L RED RD I A Sbjct: 143 IGGKGLFAKEIHEALADGRIDFAVHSLKDLETTLPPGLVLACTLKREDARDALILSPGLA 202 Query: 116 QSLKD-----LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAIL 170 QS D L +++G +S+RR+A +L R D+ RG ++TRL+KL ++ A L Sbjct: 203 QSDPDDPYSALPEGALVGCASVRRQAQMLHVRPDLQFGLLRGNVQTRLDKLAAHQCQATL 262 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 LA AG+KRL + +L+ P+ GQG + + ++ + +EL+ I + Sbjct: 263 LALAGLKRLGMAERASIVLDPTVMVPAAGQGIVGVTVREDDVELRELLSAIEDYEARAVA 322 Query: 231 NCERAFLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284 ER+ LAELDGSC++ I G+A K L+ G+V DG + S G D Sbjct: 323 TAERSLLAELDGSCRTPIGGYAQLLPAEEGKDPKLHLTGLVAREDGSFLLKRSITGMPED 382 Query: 285 AINIGRDAAQYIRFISNKNVFN 306 A +G++ + +R S ++F Sbjct: 383 AARLGKELGESLRKDSPSDIFE 404 >gi|240949414|ref|ZP_04753755.1| porphobilinogen deaminase [Actinobacillus minor NM305] gi|240296163|gb|EER46819.1| porphobilinogen deaminase [Actinobacillus minor NM305] Length = 308 Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 105/268 (39%), Positives = 154/268 (57%), Gaps = 2/268 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR SPLAL A ++ L + H P I ++ + TKGD I + L +IGGKG Sbjct: 2 KDTLRIATRQSPLALWQANFVKAEL-EKH-FPELQIELVTMVTKGDIILDTPLAKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L Sbjct: 60 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNQYQNLDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+ L+ + + RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 120 KGAVVGTSSLRRQCQLMAAYPHLEIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMP 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ +++E P+ GQGA+ IET +++ + + +NH+ T V ERA A L G Sbjct: 180 ERIRSFISVEQSLPAAGQGAVGIETRLDDQRVLSYLAKLNHQPTAYRVIAERAMNAHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270 C+ I GFA + L +V + DG Sbjct: 240 GCQVPIGGFATLENDELTLNALVGSLDG 267 >gi|323464250|gb|ADX76403.1| porphobilinogen deaminase [Staphylococcus pseudintermedius ED99] Length = 309 Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 109/292 (37%), Positives = 173/292 (59%), Gaps = 6/292 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + L +V P +I I + TKGD+I +R L+++GGKGLF +E Sbjct: 6 VGSRRSQLALTQSQQFIDRLKEVD--PTLDIEIKEIVTKGDQIVDRQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+ +L S +ID A+HS KD+P++L +GL + RE+ D FIS L +L S+I Sbjct: 64 IQNELFSRDIDMAIHSLKDVPSELPEGLTLGCIPDRENPFDAFISKNHIPLDELPDGSII 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L ++ + RG I+TRL KL AI+LA AG+KR+ + ++ Sbjct: 124 GTSSLRRGAQILAKYPNLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDDIVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ + P+ GQGA+ IE ++ + L+ +++ED V ER FL E++GSC+ Sbjct: 184 TYLDEDLLVPAIGQGALGIECRADDDELLALLAKVHNEDVSACVTAERTFLKEMNGSCQV 243 Query: 247 AIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 I G+A K T + F G++++ DGK E + +G D I +G + ++ ++ Sbjct: 244 PIGGYATRKNDTEIQFTGLIMSPDGKQRFEYTFSGQ--DPIQVGSEVSRVLK 293 >gi|258511805|ref|YP_003185239.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478531|gb|ACV58850.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 305 Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 112/287 (39%), Positives = 160/287 (55%), Gaps = 6/287 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV--IIPLSTKGDRITNRTLTEIGGK 61 + R+ TR S LAL + ++D+ K H + ++P+ T+GD I +R L+E+GGK Sbjct: 2 RTLRVATRRSALALTQT----NHVVDLLKQVAHGVEFELVPIRTRGDEIVDRALSEVGGK 57 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +IE L +G+ D AVHS KD+P +L GL I A PRED RD IS T Q L DL Sbjct: 58 GLFVADIEDALATGQADLAVHSLKDVPFELRDGLTIGAVPPREDPRDALISRTGQGLFDL 117 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSSLRR+A L R R D+ V RG ++TRL +L + AI+LA +G+ RL Sbjct: 118 PPGARVGTSSLRRQAALRRLRPDLCVETLRGNVDTRLRRLEEGQFDAIVLAASGLHRLGL 177 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I E L ++ F P+ GQGA+ IE + + + I D +V ERAFL+ L+ Sbjct: 178 AERITEYLPVDRFVPAVGQGALAIECRAEDDEVMRHLAAIADPDATRAVEAERAFLSRLE 237 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 GSC+ I +A G L V G ++ R G+ A+ + Sbjct: 238 GSCQVPIGAYAEPVGHELRLIAFVADPSGIHHLQLERTGDEARALGV 284 >gi|296331638|ref|ZP_06874107.1| porphobilinogen deaminase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675403|ref|YP_003867075.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus subtilis subsp. spizizenii str. W23] gi|296151233|gb|EFG92113.1| porphobilinogen deaminase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413647|gb|ADM38766.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus subtilis subsp. spizizenii str. W23] Length = 313 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 115/302 (38%), Positives = 167/302 (55%), Gaps = 11/302 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGKGL Sbjct: 2 RTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFAFEIKEIVTKGDRIVDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L++ +ID AVHS KDMP L +GL I RED RD IS L ++ Sbjct: 60 FVKEIEQALLNEDIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNHVKLSEMKE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KE 182 +VIGTSSLRR A LL R DI++ RG I+TRL KL AI+LA AG+ R+ K+ Sbjct: 120 GAVIGTSSLRRSAQLLIERPDITIKWIRGNIDTRLKKLETEDYDAIILAAAGLSRMGWKQ 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L + P+ GQGA+ IE ++ + L E T +V ERA+L ++G Sbjct: 180 DVVTEFLEPDRCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAYLNAMEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN-------RCDAINIGRDAAQ 294 C+ IAG++ + + G+V + DGKI + + GN RC A+ + A + Sbjct: 240 GCQVPIAGYSVLNEQDEIELTGLVTSPDGKIIFKETVTGNDPEEVGKRCAALMADKGAKE 299 Query: 295 YI 296 I Sbjct: 300 LI 301 >gi|62259213|gb|AAX77846.1| unknown protein [synthetic construct] Length = 335 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 104/271 (38%), Positives = 157/271 (57%), Gaps = 3/271 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 +E K I +R S LAL ++ + IP I + T+GD I ++ L +IGG Sbjct: 25 LEMKQITIASRESKLALWQTNFVKNRIQLELNIPCE---ISTMKTQGDIILDQPLNKIGG 81 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K LF +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ D Sbjct: 82 KALFMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDD 141 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ Sbjct: 142 LPKGAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLE 201 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL Sbjct: 202 LVERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQEL 261 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 G C AI +A + + +V +SDGK Sbjct: 262 KGGCHVAIGAYAELDNNQITLMAMVASSDGK 292 >gi|33597222|ref|NP_884865.1| porphobilinogen deaminase [Bordetella parapertussis 12822] gi|33601068|ref|NP_888628.1| porphobilinogen deaminase [Bordetella bronchiseptica RB50] gi|39931443|sp|Q7W785|HEM3_BORPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|39931458|sp|Q7WKM1|HEM3_BORBR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|33573649|emb|CAE37934.1| porphobilinogen deaminase [Bordetella parapertussis] gi|33575503|emb|CAE32581.1| porphobilinogen deaminase [Bordetella bronchiseptica RB50] Length = 314 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 109/287 (37%), Positives = 155/287 (54%), Gaps = 2/287 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A R L + P ++ ++ L+T+GD+I +RTL+++GGKGLF +E Sbjct: 9 IATRASRLALWQAEHVRDLLR--ARYPACSVELLTLTTRGDQILDRTLSKVGGKGLFVKE 66 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L+ G D AVHS KD+P L ++S L R D RD F+S+ SL DL + + Sbjct: 67 LETALLDGRADLAVHSLKDVPVDLHAPFELSCVLERADPRDAFVSNDYGSLADLPPGAAV 126 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR++ + + V RG ++TRL KL+N AI+LA AG++RL I+ Sbjct: 127 GTSSLRRESQIRARYPHLVVKPLRGNLDTRLGKLDNGDYAAIVLAAAGLERLGLAARIRA 186 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L D P+ GQGA+ IE + ++ + T V ERA L GSC+ Sbjct: 187 LLEPADSLPAAGQGALGIEILQGRADVRAMLAPLGDAATLACVTAERAVSRMLGGSCQVP 246 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 +A +A G L +V A DG+ R G R A IG AA+ Sbjct: 247 LAAYARIDGDELALRALVAAPDGRRIVRAERRGPRDQAQAIGESAAR 293 >gi|283851270|ref|ZP_06368553.1| porphobilinogen deaminase [Desulfovibrio sp. FW1012B] gi|283573439|gb|EFC21416.1| porphobilinogen deaminase [Desulfovibrio sp. FW1012B] Length = 310 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 107/300 (35%), Positives = 163/300 (54%), Gaps = 4/300 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A + L + + P + ++P+ TKGD+I + L ++GGKGLF +E Sbjct: 7 IATRSSKLALWQANHVSARLRETY--PGLVVDLLPIKTKGDKILDVPLAKVGGKGLFVKE 64 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ L+ G D AVHS KD+P + +GL + RED D +S L + + Sbjct: 65 IEEALLDGRADLAVHSMKDVPAEQPQGLVVGIVPEREDPCDTLLSVAYAGFAALPAGARV 124 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRRKA L+ R D+S+ID RG ++TR+ KL + AI++A AG+ RL Sbjct: 125 GTSSLRRKAQLMALRPDLSIIDLRGNLDTRVGKLLDGLFDAIVVATAGLNRLGLTAPQAV 184 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 L +F P+ QGA+ +E ++P+ ++ +H ++ D+V ER FLA L+G C+ Sbjct: 185 RLGPPEFLPAAAQGALGLEYRTDDPETAAMLAFFDHPESRDAVAAERGFLARLEGGCQVP 244 Query: 248 IAGFAYCKGSTLYFYGIVLASD-GKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 IA A G L G+V + G+ F + G R +A +G+ A+ + + K V Sbjct: 245 IAAHATIDGDALALDGLVADPETGQTFRG-NVTGKRSEARALGQGLAESVLAMGAKAVLE 303 >gi|113868875|ref|YP_727364.1| porphobilinogen deaminase [Ralstonia eutropha H16] gi|113527651|emb|CAJ93996.1| porphobilinogen deaminase [Ralstonia eutropha H16] Length = 337 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 103/277 (37%), Positives = 160/277 (57%), Gaps = 2/277 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LAL A R++L + P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 23 IASRESRLALWQAEHVRAALQQYY--PACDVSILGMTTRGDQILDRTLSKVGGKGLFVKE 80 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E + G D AVHS KD+P +L +G ++A + RED RD +S SL ++ +V+ Sbjct: 81 LEFAMDEGRADLAVHSLKDVPMELPEGFALTAVMEREDPRDALVSSAYASLDEMPAGTVV 140 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A L + + RG ++TRL KL+ + AI+LA AG+KRL + I+ Sbjct: 141 GTSSLRREAALRSRYPQLVIKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGERIRA 200 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 ++ I+ P+ GQGA+ IE N P+ + + +NH+ T +V+ ERA L GSC+ Sbjct: 201 LIPIDVSLPAAGQGALGIEILANRPELAQWLAPLNHQPTALAVSAERAVSRMLGGSCQVP 260 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284 +A A +G L V DG + +G D Sbjct: 261 LAAHARWEGDQLKLDAFVALPDGTRAIRAAASGPAVD 297 >gi|16800659|ref|NP_470927.1| porphobilinogen deaminase [Listeria innocua Clip11262] gi|23821696|sp|Q92BF8|HEM3_LISIN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|16414078|emb|CAC96822.1| hemC [Listeria innocua Clip11262] gi|313618766|gb|EFR90670.1| porphobilinogen deaminase [Listeria innocua FSL S4-378] Length = 309 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 115/281 (40%), Positives = 161/281 (57%), Gaps = 5/281 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSNWVIKKLKENY--PEIDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L ID AVHS KD+P+ L GL I A RE D F+ + +L DL Sbjct: 60 LFVSEVEQALSDEVIDFAVHSMKDVPSSLKDGLVIGAIPKRESPLDCFVFNEVSTLDDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179 +VIGTSSLRR A LL+ R D V RG I+TRL KL+ AI+LA AG+ R L Sbjct: 120 KGAVIGTSSLRRAAQLLKHRPDFVVKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + E ++ E P+ GQGA+ IE + + +++ I+HE+T V ER FL + Sbjct: 180 ENTSLKLEDISPELCLPAVGQGALAIECRETDLQICDMLASIHHEETGICVEAERVFLKK 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 L+G C+ IAGFA G +++F G+V +DG I E R G Sbjct: 240 LNGGCEIPIAGFATKTGDSVHFKGLVGNADGSIILESERTG 280 >gi|257465324|ref|ZP_05629695.1| porphobilinogen deaminase [Actinobacillus minor 202] gi|257450984|gb|EEV25027.1| porphobilinogen deaminase [Actinobacillus minor 202] Length = 308 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 106/268 (39%), Positives = 153/268 (57%), Gaps = 2/268 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR SPLAL A ++ L + H P I ++ + TKGD I + L +IGGKG Sbjct: 2 KDILRIATRQSPLALWQANFVKAEL-EKH-FPELQIELVTMVTKGDIILDTPLAKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ QSL L Sbjct: 60 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNQYQSLDKLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+ L+ + + RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 120 KGAVVGTSSLRRQCQLMAAYPHLEIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMP 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ +++E P+ GQGA+ IET +++ + + +NH+ T V ERA A L G Sbjct: 180 ERIRSFISVEQSLPAAGQGAVGIETRLDDQRVLSYLAKLNHQPTAYRVIAERAMNAHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270 C+ I GFA + L +V + DG Sbjct: 240 GCQVPIGGFATLENDELTLNALVGSLDG 267 >gi|319651737|ref|ZP_08005863.1| porphobilinogen deaminase [Bacillus sp. 2_A_57_CT2] gi|317396556|gb|EFV77268.1| porphobilinogen deaminase [Bacillus sp. 2_A_57_CT2] Length = 311 Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 110/283 (38%), Positives = 161/283 (56%), Gaps = 4/283 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL S L + P + + TKGD+I + TL+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQTNWVISQLKSID--PSFEFEVKEIVTKGDKILDVTLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ ++ EID AVHS KDMP L GL I + RED RD IS L DL S++ Sbjct: 64 IEQAMLDEEIDMAVHSMKDMPAVLPAGLTIGSIPEREDHRDALISKGHIKLNDLREGSIV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A LL R D+ + RG I+TRL+KL + AI+LA AG+ R+ V+ Sbjct: 124 GTSSLRRGAQLLAQRPDLEIKWIRGNIDTRLSKLETEEYDAIILAAAGLSRMGWAADVVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E L E P+ GQGA+ IE ++ + + L+ +T +V ERAFL +++G C+ Sbjct: 184 EFLEPEVCVPAVGQGALSIECRESDKELRALLDKFTCSETNQTVRAERAFLHKMEGGCQV 243 Query: 247 AIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 IAGFA + + G+V + DGK+ ++ + G+ + + + Sbjct: 244 PIAGFATINETGEMELTGLVGSPDGKVIYKETLTGSDPEELGV 286 >gi|34581586|ref|ZP_00143066.1| porphobilinogen deaminase [Rickettsia sibirica 246] gi|28262971|gb|EAA26475.1| porphobilinogen deaminase [Rickettsia sibirica 246] Length = 351 Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 110/293 (37%), Positives = 164/293 (55%), Gaps = 24/293 (8%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLAL H T + + + P N I+P+ T GD I N+ L +IGGK LF Sbjct: 6 RIGTRKSPLALIH---TNLVIQQIKQFFPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++ Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRL------ 176 Query: 186 KEILNIE--------DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 E+ N E P GQG I +E ++ E+ INH T++ + ERAFL Sbjct: 177 -EVFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFL 235 Query: 238 AELDGSCKSAIAGFA-YCKGSTLYF----YGIVLASDGKIFHEVSRNGNRCDA 285 LD +C++ IA ++ Y + + Y V + + + NR DA Sbjct: 236 EYLDANCRTPIAAYSQYLDANPRHLSKLAYREVFEGNAEALATAAYKSNRTDA 288 >gi|74318586|ref|YP_316326.1| porphobilinogen deaminase [Thiobacillus denitrificans ATCC 25259] gi|123772872|sp|Q3SFT5|HEM3_THIDA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|74058081|gb|AAZ98521.1| porphobilinogen deaminase [Thiobacillus denitrificans ATCC 25259] Length = 306 Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 112/299 (37%), Positives = 160/299 (53%), Gaps = 2/299 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R L ++H P + I+ ++T+GD+I + TL++IGGKGLF +E Sbjct: 6 IASRESALAMWQAEHIRDRLRELH--PECKVNILGMTTRGDQILDVTLSKIGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L +GE D AVHS KD+P +L G +++ RED RD F+S+ L DL SV+ Sbjct: 64 LEVALAAGEADLAVHSMKDVPMELPPGFELAVIGEREDPRDAFVSNRYARLSDLPPGSVV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A L ++V RG + TRL KL+ + AILLA AG+KRL IK Sbjct: 124 GTSSLRREAQLRARYPHLTVKPLRGNVGTRLKKLDEGQFDAILLAAAGLKRLGLGARIKS 183 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L++E+ P+ GQGA+ IE N ++ +N T V ER L GSC+ Sbjct: 184 LLSVEESIPAAGQGALGIEIRSGNTAVAAMLAPLNDPVTAACVRAERQVSRVLGGSCQVP 243 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 + A K L G V DG F G+ D +G+ A + + V + Sbjct: 244 LGAHASYKDGRLLLEGFVAKPDGSRFLVDRAEGDASDPEAVGQALADKLLAQGARAVLD 302 >gi|317154529|ref|YP_004122577.1| porphobilinogen deaminase [Desulfovibrio aespoeensis Aspo-2] gi|316944780|gb|ADU63831.1| porphobilinogen deaminase [Desulfovibrio aespoeensis Aspo-2] Length = 310 Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 109/303 (35%), Positives = 161/303 (53%), Gaps = 2/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL A + L H P + ++ + TKGD+I + L ++GGKGL Sbjct: 2 KQLTIATRGSALALWQANHIKDRLEAEH--PGLTVHLLKIKTKGDKILDVPLAKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+ G AVHS KD+PT+L +GL++ RE D +S + L L Sbjct: 60 FVKEIEEALLDGRAQLAVHSMKDVPTELPEGLEVGVIPEREASTDSLLSVKYEGLAGLPR 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR++ L R D+ + RG ++TR+ KL + AI++A AG+ RL+ Sbjct: 120 GAVVGTSSLRRQSQLATLRPDLKIESLRGNLDTRVRKLLAGEFDAIVVATAGLNRLELTA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 EIL DF P+ QGA+ IE H N + +++ +NHE + V ER FL LDG Sbjct: 180 PKHEILGPPDFLPAVAQGALGIEYHSANAEVAAMLQFLNHEPSKRQVLAERGFLTGLDGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IA ++ G L G V DG ++ G +A +IG A+ + K Sbjct: 240 CQVPIAAWSVIDGERLRLTGFVADVDGSRPIRMTAEGPVDNAWDIGAALAEKVLAAGGKA 299 Query: 304 VFN 306 + + Sbjct: 300 ILD 302 >gi|225023639|ref|ZP_03712831.1| hypothetical protein EIKCOROL_00499 [Eikenella corrodens ATCC 23834] gi|224943521|gb|EEG24730.1| hypothetical protein EIKCOROL_00499 [Eikenella corrodens ATCC 23834] Length = 312 Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 109/289 (37%), Positives = 160/289 (55%), Gaps = 2/289 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A +S L ++ P + I+ L+T+GDRI ++TL++IGGKGLF +E Sbjct: 8 IASRESALAMWQAEHIQSRLRTLY--PGCEVSILGLTTQGDRILDKTLSKIGGKGLFVKE 65 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L G D AVHS KD+P L +G ++A RE D F+S+ Q L+DL +V+ Sbjct: 66 LEQALSDGRADLAVHSIKDVPMVLPEGFALAAICERESPFDAFVSNNYQRLEDLPAGAVV 125 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A L + V RG ++TRL KL+ AI+LA AG+KRL + I+ Sbjct: 126 GTSSLRREAQLRARFPQLQVAPLRGNVQTRLAKLDQGDYAAIILAEAGLKRLGLTQRIRH 185 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 L+ D P+ GQGA+ IE + + L+ +NH T V ERA L GSC+ Sbjct: 186 TLSPADSLPAAGQGALGIEIAAHRSELLPLLAPLNHAQTAACVTAERALARALGGSCQVP 245 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +A + + L +G+V DG + R A +GR A+ + Sbjct: 246 LAAYCTKQDGLLTLHGLVGHPDGSVILREEAQAPREYADALGRAVAKKL 294 >gi|102139876|gb|ABF70029.1| porphobilinogen deaminase, chloroplast (hydroxymethylbilane synthase) (pre-uroporphyrinogen synthase), putative [Musa acuminata] Length = 328 Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 111/301 (36%), Positives = 161/301 (53%), Gaps = 32/301 (10%) Query: 11 RCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 R S LALA A ETR L H + II + T GD I ++ L +IGGKGLFT+EI Sbjct: 54 RDSDLALAQARETRDKLKAAHSELAEEGAVEIIIIKTTGDMILDKPLADIGGKGLFTKEI 113 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128 + L+ G ID AVHS KD+PT L +G + LP Sbjct: 114 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLP-------------------------- 147 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188 +SLRR++ +L + V++ RG ++TRL KL N HA LLA AG+KRL + + I Sbjct: 148 -ASLRRQSQILCRYPSLKVVNLRGNVQTRLTKLKNGDVHATLLALAGLKRLNMVENVTSI 206 Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248 L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FL LDG+C++ I Sbjct: 207 LSMEEMLPAVAQGAIGIACRSNDNKMMEYLSSLNHEDTRSAVACEREFLTVLDGNCRTPI 266 Query: 249 AGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFISNKNVF 305 A +A+ K + F G++ + DG +E +R G D + +G+DA ++ + + Sbjct: 267 AAYAHRDKDGSCSFRGLLASPDGSKVYETTRIGPYSFDDMVEMGKDAGHELKAKAGPGFY 326 Query: 306 N 306 + Sbjct: 327 D 327 >gi|297537269|ref|YP_003673038.1| porphobilinogen deaminase [Methylotenera sp. 301] gi|297256616|gb|ADI28461.1| porphobilinogen deaminase [Methylotenera sp. 301] Length = 319 Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 113/290 (38%), Positives = 164/290 (56%), Gaps = 4/290 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-IIPLSTKGDRITNRTLTEIGGKGLFTE 66 I +R SPLA+ A +S L ++ P IV I+ ++T GD+I + L ++GGKGLF + Sbjct: 17 IASRESPLAMWQALHIQSRLQALY---PSTIVEILGMTTTGDQILDTPLAKVGGKGLFVK 73 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 E+E L G D AVHS KD+P L +G ++A RED RD F+S+ SL+DL S+ Sbjct: 74 ELETALEDGRADLAVHSMKDVPMNLPEGFMMAATGEREDPRDAFVSNDFNSLEDLPEGSI 133 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+ RL I+ Sbjct: 134 VGTSSLRRQSQLQARLPHLKIESLRGNLQTRLRKLDEGQYAAIILAAAGLIRLGLSARIR 193 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 +++ E P+ GQGA+ IE + N P ++ +NH DT V ERA L GSC Sbjct: 194 NVISPELSIPAVGQGALGIEINANRPDLLAVLAPLNHPDTQVCVEAERAMSRALAGSCTV 253 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + +A CKG + G V + DGK + NGNR A +G+ A + Sbjct: 254 PLGAYATCKGEEISITGFVASVDGKQMLIETANGNRNQADALGKALANQL 303 >gi|149921672|ref|ZP_01910121.1| porphobilinogen deaminase [Plesiocystis pacifica SIR-1] gi|149817516|gb|EDM76986.1| porphobilinogen deaminase [Plesiocystis pacifica SIR-1] Length = 322 Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 106/310 (34%), Positives = 161/310 (51%), Gaps = 4/310 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 + + R+GTR S LAL A R L+ + ++ + TKGDR+T+R L ++GG Sbjct: 6 LAARKLRLGTRGSALALWQANMIRDRLLAAWGAQGLEVELVRVVTKGDRVTDRPLNQVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ--SL 118 GLF + +E KL++GEID AVHS KDMP L +GL +++ R D RD F++ + +L Sbjct: 66 MGLFVKGLEDKLLAGEIDFAVHSMKDMPGTLPEGLTLASTPERADPRDAFLAAPGRDVTL 125 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L S +GTSSLRR AL R + ++ RG + TR+ K+ + A+LLA AG+ R Sbjct: 126 ATLPAGSRLGTSSLRRGALAKRINPGLEIVPIRGNVPTRMGKIAEGEVDAVLLAAAGLDR 185 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L K + I E L+ + F P+ QG + IE + L + + H T ER++LA Sbjct: 186 LGKGEAITERLDPDAFMPAACQGVLAIELRAADTDIAALFEPLGHGPTSIVAAAERSYLA 245 Query: 239 ELDGSCKSAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L G C+ +A A G + G+V+ DG + G DA +G A+ + Sbjct: 246 TLQGGCQVPLACHARLSEDGRRVRVEGLVVEPDGSTVYASEAEGPVADAAQLGAGVAREV 305 Query: 297 RFISNKNVFN 306 + V + Sbjct: 306 LAAGGQGVID 315 >gi|307546845|ref|YP_003899324.1| porphobilinogen deaminase [Halomonas elongata DSM 2581] gi|307218869|emb|CBV44139.1| porphobilinogen deaminase [Halomonas elongata DSM 2581] Length = 380 Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 106/269 (39%), Positives = 157/269 (58%), Gaps = 4/269 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RI TR S LA+ A R LM+VH P + ++ LST+GD+I + L ++GGKGL Sbjct: 72 QTLRIATRKSQLAMWQAEHVRDRLMEVH--PELTVELVALSTRGDQILDTPLAKVGGKGL 129 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ ++ G D AVHS KD+P + + L +S L + D F+S+ SL +L Sbjct: 130 FVKELEEAMLDGRADIAVHSMKDVPMQFPESLGLSVILAGAEPTDAFVSNQYASLDELPE 189 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSSLRR + R D+ V++ RG ++TRL KL+N + AILLA AG+KRL E+ Sbjct: 190 GARIGTSSLRRGLQMRERRPDLEVLNLRGNVQTRLGKLDNGEFDAILLATAGLKRLGLEE 249 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + L E P+ GQGA+ IE +++ + L+ ++ DT V ERA L+G Sbjct: 250 RITQELPPEICLPACGQGALGIECRMHDAELIGLLAPLDDPDTATRVRAERAMNTRLEGG 309 Query: 244 CKSAIAGFAYCK--GSTLYFYGIVLASDG 270 C+ IAG A + G TL+ +V +G Sbjct: 310 CQVPIAGHAVFENDGQTLWLRALVGNPEG 338 >gi|89255577|ref|YP_512938.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica LVS] gi|156501520|ref|YP_001427585.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010342|ref|ZP_02275273.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica FSC200] gi|187932192|ref|YP_001892177.1| porphobilinogen deaminase [Francisella tularensis subsp. mediasiatica FSC147] gi|254368575|ref|ZP_04984591.1| hydroxymethylbilane synthase [Francisella tularensis subsp. holarctica FSC022] gi|290954410|ref|ZP_06559031.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica URFT1] gi|295312152|ref|ZP_06802958.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica URFT1] gi|123401648|sp|Q2A5R3|HEM3_FRATH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166217773|sp|A7N9H6|HEM3_FRATF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238058914|sp|B2SE34|HEM3_FRATM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|89143408|emb|CAJ78581.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella tularensis subsp. holarctica LVS] gi|156252123|gb|ABU60629.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica FTNF002-00] gi|157121478|gb|EDO65669.1| hydroxymethylbilane synthase [Francisella tularensis subsp. holarctica FSC022] gi|187713101|gb|ACD31398.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella tularensis subsp. mediasiatica FSC147] Length = 300 Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 103/268 (38%), Positives = 155/268 (57%), Gaps = 3/268 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQSELNIPCE---ISTMKTQGDIILDQPLNKIGGKAL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 59 FMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ + Sbjct: 119 GAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELVE 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271 C AI +A + + +V +SDGK Sbjct: 239 CHVAIGAYAELDNNQITLMAMVASSDGK 266 >gi|238650859|ref|YP_002916714.1| porphobilinogen deaminase [Rickettsia peacockii str. Rustic] gi|259646264|sp|C4K265|HEM3_RICPU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238624957|gb|ACR47663.1| porphobilinogen deaminase [Rickettsia peacockii str. Rustic] Length = 351 Score = 181 bits (460), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 110/293 (37%), Positives = 164/293 (55%), Gaps = 24/293 (8%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLAL H T + + + P N I+P+ T GD I N+ L +IGGK LF Sbjct: 6 RIGTRKSPLALIH---TNLVIQQIKQFFPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++ Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRL------ 176 Query: 186 KEILNIE--------DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 E+ N E P GQG I +E ++ E+ INH T++ + ERAFL Sbjct: 177 -EVFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFL 235 Query: 238 AELDGSCKSAIAGFA-YCKGSTLYF----YGIVLASDGKIFHEVSRNGNRCDA 285 LD +C++ IA ++ Y + + Y V + + + NR DA Sbjct: 236 EYLDANCRTPIAAYSQYLDANPRHLSKLAYREVFEGNTEALATAAYKSNRTDA 288 >gi|297183175|gb|ADI19316.1| porphobilinogen deaminase [uncultured delta proteobacterium HF0500_03A04] Length = 315 Score = 181 bits (460), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 103/266 (38%), Positives = 148/266 (55%), Gaps = 2/266 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LAL A +S + H P + ++ + TKGDRI +R L+++GGKGLF Sbjct: 5 LRIATRGSRLALWQANWVKSQIEQNH--PGQTVELVIVQTKGDRIQDRPLSQVGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L D AVHS KD+ ++ +GL + RED RD ++ S +L + Sbjct: 63 KELEGSLFREAADLAVHSLKDVTGEVPEGLALPVVTAREDFRDALVAPRHGSFCELPSGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR A LL R D+ RG +ETRLNK+++ A LLA AG+KRL+ E I Sbjct: 123 VVGTSSLRRAAQLLHLRPDLETQPIRGNVETRLNKVDSGAFDATLLAVAGLKRLELELRI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+ E P+ GQG + +E ++P EL++ + + T ER L L+G+C+ Sbjct: 183 TEVFPPEMLLPALGQGVLGLEIRADDPATLELIQPLQDKTTALCCQAERRLLERLEGNCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK 271 +AG G L G +LA DG+ Sbjct: 243 VPLAGLCERCGERLLLRGQLLAPDGQ 268 >gi|194290490|ref|YP_002006397.1| porphobilinogen deaminase [Cupriavidus taiwanensis LMG 19424] gi|193224325|emb|CAQ70336.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Cupriavidus taiwanensis LMG 19424] Length = 336 Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 103/263 (39%), Positives = 152/263 (57%), Gaps = 2/263 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LAL A R++L + P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 23 IASRESRLALWQAEHVRAALQQYY--PACDVSILGMTTRGDQILDRTLSKVGGKGLFVKE 80 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E + G D AVHS KD+P +L G ++A + RED RD +S SL ++ +V+ Sbjct: 81 LEFAMDEGRADLAVHSLKDVPMELPPGFTLAAVMEREDPRDALVSSAYASLDEMPPGTVV 140 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A L + V RG ++TRL KL+ + AI+LA AG+KRL I+ Sbjct: 141 GTSSLRREAALRSRYPHLVVKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGDRIRA 200 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 ++ +E P+ GQGA+ IET P+ E + +NH+ T +V ERA L GSC+ Sbjct: 201 LIPLEASLPAAGQGALGIETLSTRPELAEWLAPLNHQPTALAVTAERAVSRRLGGSCQVP 260 Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270 +A A G L V DG Sbjct: 261 LAAHARWDGDQLRLEAFVALPDG 283 >gi|157828627|ref|YP_001494869.1| porphobilinogen deaminase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933343|ref|YP_001650132.1| porphobilinogen deaminase [Rickettsia rickettsii str. Iowa] gi|189028152|sp|B0BY00|HEM3_RICRO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189028153|sp|A8GSI6|HEM3_RICRS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157801108|gb|ABV76361.1| porphobilinogen deaminase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908430|gb|ABY72726.1| porphobilinogen deaminase [Rickettsia rickettsii str. Iowa] Length = 351 Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 110/293 (37%), Positives = 164/293 (55%), Gaps = 24/293 (8%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLAL H T + + + P N I+P+ T GD I N+ L +IGGK LF Sbjct: 6 RIGTRKSPLALIH---TNLVIQQIKQFFPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++ Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRL------ 176 Query: 186 KEILNIE--------DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 E+ N E P GQG I +E ++ E+ INH T++ + ERAFL Sbjct: 177 -EVFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFL 235 Query: 238 AELDGSCKSAIAGFA-YCKGSTLYF----YGIVLASDGKIFHEVSRNGNRCDA 285 LD +C++ IA ++ Y + + Y V + + + NR DA Sbjct: 236 EYLDANCRTPIAAYSQYLDANPRHLSKLAYREVFEGNTEALATAAYKSNRTDA 288 >gi|46907786|ref|YP_014175.1| porphobilinogen deaminase [Listeria monocytogenes serotype 4b str. F2365] gi|47093092|ref|ZP_00230869.1| porphobilinogen deaminase [Listeria monocytogenes str. 4b H7858] gi|226224157|ref|YP_002758264.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Listeria monocytogenes Clip81459] gi|254824385|ref|ZP_05229386.1| porphobilinogen deaminase [Listeria monocytogenes FSL J1-194] gi|254852180|ref|ZP_05241528.1| porphobilinogen deaminase [Listeria monocytogenes FSL R2-503] gi|254931496|ref|ZP_05264855.1| porphobilinogen deaminase [Listeria monocytogenes HPB2262] gi|254993453|ref|ZP_05275643.1| porphobilinogen deaminase [Listeria monocytogenes FSL J2-064] gi|300764778|ref|ZP_07074768.1| porphobilinogen deaminase [Listeria monocytogenes FSL N1-017] gi|55976452|sp|Q71ZB2|HEM3_LISMF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|259647801|sp|C1KVK3|HEM3_LISMC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|46881055|gb|AAT04352.1| porphobilinogen deaminase [Listeria monocytogenes serotype 4b str. F2365] gi|47018532|gb|EAL09288.1| porphobilinogen deaminase [Listeria monocytogenes str. 4b H7858] gi|225876619|emb|CAS05328.1| Putative porphobilinogen deaminase (hydroxymethylbilane synthase) [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605484|gb|EEW18092.1| porphobilinogen deaminase [Listeria monocytogenes FSL R2-503] gi|293583048|gb|EFF95080.1| porphobilinogen deaminase [Listeria monocytogenes HPB2262] gi|293593620|gb|EFG01381.1| porphobilinogen deaminase [Listeria monocytogenes FSL J1-194] gi|300514454|gb|EFK41511.1| porphobilinogen deaminase [Listeria monocytogenes FSL N1-017] gi|328465591|gb|EGF36820.1| porphobilinogen deaminase [Listeria monocytogenes 1816] gi|332311998|gb|EGJ25093.1| Porphobilinogen deaminase [Listeria monocytogenes str. Scott A] Length = 309 Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 112/276 (40%), Positives = 160/276 (57%), Gaps = 9/276 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L Sbjct: 60 LFVSEVEQALSDEVIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNRVNSLDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 120 QGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMG-- 177 Query: 183 KVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + L +ED P P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL Sbjct: 178 WLENTTLKLEDIPPELCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFL 237 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +L+G C+ IAGFA ++F G+V +DG I Sbjct: 238 KKLNGGCEIPIAGFATRANEVVHFKGLVGNADGSII 273 >gi|255521282|ref|ZP_05388519.1| porphobilinogen deaminase [Listeria monocytogenes FSL J1-175] Length = 309 Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 112/276 (40%), Positives = 160/276 (57%), Gaps = 9/276 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L Sbjct: 60 LFVSEVEQALSDEVIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNRVNSLDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 120 QGSVIGTSSLRRAAQLLKHRPDFVINPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179 Query: 183 KVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + L +ED P P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL Sbjct: 180 E--NTTLKLEDIPPELCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFL 237 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +L+G C+ IAGFA ++F G+V +DG I Sbjct: 238 KKLNGGCEIPIAGFATRANEVVHFKGLVGNADGSII 273 >gi|114568594|ref|YP_755274.1| porphobilinogen deaminase [Maricaulis maris MCS10] gi|114339056|gb|ABI64336.1| porphobilinogen deaminase [Maricaulis maris MCS10] Length = 321 Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 113/277 (40%), Positives = 161/277 (58%), Gaps = 15/277 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLM--------DVHKIPPHNIVIIPLSTKGDRITNRTL 55 +P I TR SPLAL A + ++ L D + P I+ L + GDRI +RTL Sbjct: 6 RPLAIATRRSPLALVQARDVQAKLAAQCGLSGEDAERCFP----ILGLVSTGDRIQDRTL 61 Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115 E GGKGLFT+EI++ + G AVHS KD+PT L G+ + A L RED RD+ I+ Sbjct: 62 IEAGGKGLFTKEIDEAQLDGRAAFAVHSMKDVPTVLPDGIVLGALLEREDPRDMLIARDG 121 Query: 116 QS-LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 ++ L DL IGT+SLRR+A LL R D+ V+ RG ++TRL KL + HA LA A Sbjct: 122 ETRLADLPEGVTIGTASLRRQAQLLHKRPDLHVVPLRGNVDTRLGKLADGGIHATFLARA 181 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G+ RL + + +++ L ++ P+ QGA+ + + +A V ++H DT +V ER Sbjct: 182 GLNRLGRAEALRDPLEADEMLPAAAQGAVGVAIRDGDEEAASYVAGLHHRDTELAVLAER 241 Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 AFL ELDGSC++ IA A+ ++ F G VL DG+ Sbjct: 242 AFLFELDGSCRTPIA--AHVNKVSMDFIGEVLTPDGQ 276 >gi|262163679|ref|ZP_06031420.1| porphobilinogen deaminase [Vibrio mimicus VM223] gi|262027895|gb|EEY46559.1| porphobilinogen deaminase [Vibrio mimicus VM223] Length = 271 Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 97/264 (36%), Positives = 146/264 (55%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 + T+GD I + L ++GGKGLF +E+E ++ G D AVHS KD+P +GL + Sbjct: 1 MVTRGDVILDTPLAKVGGKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICE 60 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 RED RD F+S+T + DL +V+GT SLRR+ L R D+ + + RG + TRL+KL+ Sbjct: 61 REDPRDAFVSNTYAKIDDLPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLD 120 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 + AI+LA AG+KRL+ E I+ + E P+ GQGA+ IE +++ + +EL+ +N Sbjct: 121 AGEYDAIILAAAGLKRLELESRIRSFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLN 180 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 H DT D V CERA L G C+ I +A G ++ +V DG G R Sbjct: 181 HTDTADRVRCERAMNLTLQGGCQVPIGSYALLDGDEIWLRALVGEPDGSQIVRGEIRGPR 240 Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306 +A +G A+ + K + Sbjct: 241 SEAEQLGITLAEQLLGQGAKEILE 264 >gi|254483263|ref|ZP_05096495.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2148] gi|214036486|gb|EEB77161.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2148] Length = 310 Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 109/290 (37%), Positives = 158/290 (54%), Gaps = 3/290 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A R +LM H P + ++ ++++GD++ + L ++GG Sbjct: 1 MPTRTLTIATRESPLALWQAEYVRDALMSAH--PRLEVNLLGMTSRGDQLLDVPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED D F+S+ +SL Sbjct: 59 KGLFVKELETALLDGSADIAVHSMKDVPMSFPEGLTLGVICEREDPTDAFVSNNFESLAQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ V RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRECQLRARRPDLQVKFLRGNVNTRLRKLDEGQYDAIILASAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I + ++++D P+ GQGA+ IE + EL++ ++H T V ERA L Sbjct: 179 FGERIADSISVDDSLPAGGQGAVGIELREGDGDVLELLQTVHHPLTAQRVIAERAMNQRL 238 Query: 241 DGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ IA FA Y L G+V DG + DA N+G Sbjct: 239 NGGCQVPIACFAEYLDNGHLRLRGLVGRPDGSEVLRAEAISSPEDAENLG 288 >gi|257059870|ref|YP_003137758.1| porphobilinogen deaminase [Cyanothece sp. PCC 8802] gi|256590036|gb|ACV00923.1| porphobilinogen deaminase [Cyanothece sp. PCC 8802] Length = 320 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 112/297 (37%), Positives = 160/297 (53%), Gaps = 5/297 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + + L H P H + +ST+GD+I + L +IG KGL Sbjct: 8 RSIRIGSRKSQLALVQTYWVQKELQRHH--PQHQFDVETMSTQGDKILDVALAKIGDKGL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120 FT+E+E + ++D AVHS KD+PT L GL + R D D + H + L Sbjct: 66 FTKELEVAMEQNQVDLAVHSLKDLPTNLPTGLILGCVTERVDPADALVVNQKHLDKQLDT 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG++RL Sbjct: 126 LPEGAVIGTSSLRRLAQLRHHFPHLTFKDVRGNVNTRLKKLDEGEYDAIILAVAGLQRLD 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ E + GQGA+ IE + + L+KV+ HE T D ERAFL EL Sbjct: 186 MSDRIHQVIPSEISLHAVGQGALGIECREGDEEVLALLKVLEHEPTRDRCYAERAFLREL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +G C+ I +G TL G+V + DG+ + + +G R A +GRD A +R Sbjct: 246 EGGCQVPIGVNTEIEGDTLTLTGMVASLDGQTLLKDTISGPRESAEQLGRDLANRLR 302 >gi|115314083|ref|YP_762806.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica OSU18] gi|122325870|sp|Q0BP15|HEM3_FRATO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|115128982|gb|ABI82169.1| hydroxymethylbilane synthase [Francisella tularensis subsp. holarctica OSU18] Length = 300 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 103/268 (38%), Positives = 155/268 (57%), Gaps = 3/268 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQSELNIPCE---ISTMKTQGDIILDQPLNKIGGKAL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 59 FMKELEVAILSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ + Sbjct: 119 GAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELVE 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271 C AI +A + + +V +SDGK Sbjct: 239 CHVAIGAYAELDNNQITLMAMVASSDGK 266 >gi|218246829|ref|YP_002372200.1| porphobilinogen deaminase [Cyanothece sp. PCC 8801] gi|218167307|gb|ACK66044.1| porphobilinogen deaminase [Cyanothece sp. PCC 8801] Length = 320 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 112/297 (37%), Positives = 160/297 (53%), Gaps = 5/297 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + + L H P H + +ST+GD+I + L +IG KGL Sbjct: 8 RSIRIGSRKSQLALVQTYWVQKELQRHH--PQHQFDVETMSTQGDKILDVALAKIGDKGL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120 FT+E+E + ++D AVHS KD+PT L GL + R D D + H + L Sbjct: 66 FTKELEVAMEQNQVDLAVHSLKDLPTNLPTGLILGCVTERVDPADALVVNKKHLDKQLDT 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG++RL Sbjct: 126 LPEGAVIGTSSLRRLAQLRHHFPHLTFKDVRGNVNTRLKKLDEGEYDAIILAVAGLQRLD 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ E + GQGA+ IE + + L+KV+ HE T D ERAFL EL Sbjct: 186 MSDRIHQVIPSEISLHAVGQGALGIECREGDEEVLALLKVLEHEPTRDRCYAERAFLREL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +G C+ I +G TL G+V + DG+ + + +G R A +GRD A +R Sbjct: 246 EGGCQVPIGVNTEIEGDTLTLTGMVASLDGQTLLKDTISGPRESAEQLGRDLANRLR 302 >gi|291279209|ref|YP_003496044.1| porphobilinogen deaminase [Deferribacter desulfuricans SSM1] gi|290753911|dbj|BAI80288.1| porphobilinogen deaminase [Deferribacter desulfuricans SSM1] Length = 305 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 109/300 (36%), Positives = 168/300 (56%), Gaps = 7/300 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LAL A +S + H I ++ + + T GD+I + L +IGGKGLF +E Sbjct: 6 IGTRGSKLALWQANHIKSLIESTHHI---DVELKIIKTTGDKILDTPLAKIGGKGLFVKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE++L++ +D AVHS KD+P +L GL++ + RE+ D F+S SL +L +VI Sbjct: 63 IEEELLNKNVDIAVHSMKDVPVELPDGLEVGVFPVREEPYDAFLSVKYNSLDELPDGAVI 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRRK L+R + + D RG ++TR+ KL + AI+LA AG+KRL + +K+ Sbjct: 123 GTSSLRRKIQLMRKYPHLVIKDLRGNVDTRIRKLTEGQYDAIILAKAGLKRLGLLEHVKQ 182 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 ++ P+ QG + IE ++ Q+++ +NHE+T ERAFL L+G C+ Sbjct: 183 TIDDTLMIPAVCQGTLGIEYREDDQDVQKVIGFLNHEETVFRTKAERAFLKRLEGGCQVP 242 Query: 248 IAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + A G L G + DG I+ E+ G++ DA+ +G A+ I K + Sbjct: 243 LGCIANLVGDRLILKGFLANLDGSKYIYEEIE--GDKTDAVKLGLKLAKNILGQGGKEII 300 >gi|313623622|gb|EFR93785.1| porphobilinogen deaminase [Listeria innocua FSL J1-023] Length = 309 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 115/281 (40%), Positives = 160/281 (56%), Gaps = 5/281 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSNWVIKKLKENY--PEIDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L ID AVHS KD+P+ L GL I A RE D F+ + +L DL Sbjct: 60 LFVSEVEQALSDEVIDFAVHSMKDVPSSLKDGLVIGAIPKRESPLDCFVFNEVSTLDDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179 +VIGTSSLRR A LL+ R D V RG I+TRL KL+ AI+LA AG+ R L Sbjct: 120 KGAVIGTSSLRRAAQLLKHRPDFVVKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + E ++ E P+ GQGA+ IE + + ++ I+HE+T V ER FL + Sbjct: 180 ENPSLKLEDISPELCLPAVGQGALAIECRETDLQICNMLASIHHEETGICVEAERVFLKK 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 L+G C+ IAGFA G +++F G+V +DG I E R G Sbjct: 240 LNGGCEIPIAGFATKTGDSVHFKGLVGNADGSIILESERTG 280 >gi|134302637|ref|YP_001122606.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis WY96-3418] gi|158513860|sp|A4IZY4|HEM3_FRATW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|134050414|gb|ABO47485.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis WY96-3418] Length = 300 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 103/268 (38%), Positives = 155/268 (57%), Gaps = 3/268 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L Sbjct: 2 KQITIASRESKLALWQTNFIKNRIQSELNIPCE---ISTMKTQGDIILDQPLNKIGGKAL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 59 FMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ + Sbjct: 119 GAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELVE 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271 C AI +A + + +V +SDGK Sbjct: 239 CHVAIGAYAELDNNQITLMAMVASSDGK 266 >gi|323189475|gb|EFZ74755.1| porphobilinogen deaminase [Escherichia coli RN587/1] Length = 286 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 100/263 (38%), Positives = 148/263 (56%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 5 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 64 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+T SL L S++GTSSLRR+ L R D+ + RG Sbjct: 65 GLGLVTICEREDPRDAFVSNTYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 125 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTR 184 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 185 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 244 Query: 274 HEVSRNGNRCDAINIGRDAAQYI 296 R G DA +G A+ + Sbjct: 245 IRGERRGAPQDAEQMGISLAEEL 267 >gi|319892715|ref|YP_004149590.1| Porphobilinogen deaminase [Staphylococcus pseudintermedius HKU10-03] gi|317162411|gb|ADV05954.1| Porphobilinogen deaminase [Staphylococcus pseudintermedius HKU10-03] Length = 309 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 108/292 (36%), Positives = 173/292 (59%), Gaps = 6/292 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + L +V P +I I + TKGD+I +R L+++GGKGLF +E Sbjct: 6 VGSRRSQLALTQSQQFIDRLKEVD--PTLDIEIKEIVTKGDQIVDRQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+ +L + +ID A+HS KD+P++L +GL + RE+ D FIS L +L S+I Sbjct: 64 IQNELFNRDIDMAIHSLKDVPSELPEGLTLGCIPDRENPFDAFISKNHIPLDELPDGSII 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L ++ + RG I+TRL KL AI+LA AG+KR+ + ++ Sbjct: 124 GTSSLRRGAQILAKYPNLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDDIVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ + P+ GQGA+ IE ++ + L+ +++ED V ER FL E++GSC+ Sbjct: 184 TYLDEDLLVPAIGQGALGIECRADDDELLALLAKVHNEDVSACVTAERTFLKEMNGSCQV 243 Query: 247 AIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 I G+A K T + F G++++ DGK E + +G D I +G + ++ ++ Sbjct: 244 PIGGYATRKNDTEIQFTGLIMSPDGKQRFEYTFSGQ--DPIQVGSEVSRVLK 293 >gi|149376990|ref|ZP_01894744.1| porphobilinogen deaminase [Marinobacter algicola DG893] gi|149358767|gb|EDM47237.1| porphobilinogen deaminase [Marinobacter algicola DG893] Length = 313 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 107/306 (34%), Positives = 168/306 (54%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K+ RI TR S LAL A +S L +H + ++ + T+GD+I + L +IGG Sbjct: 1 MSKRTLRIATRSSALALWQAEFIKSELERLHD--NVTVELVKIKTQGDKILDVPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ +++G D AVHS KD+P + +GL + A RED D F+S+ ++ Sbjct: 59 KGLFVKELEEAMLAGSADLAVHSMKDVPMEFPEGLGLVAICEREDPTDAFVSNDYDNVNA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT+SLRR+A L +R D+ + RG + TRL KL+ AI+LA +G+KRL Sbjct: 119 LPHGAVVGTASLRREAQLRAYRPDLEIRTLRGNVNTRLAKLDAGDYQAIVLASSGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ L P+ GQGA+ IE +++ + +++ ++H D+ D V ERA L Sbjct: 179 FHDRIRYCLPDSISLPAVGQGALGIECRLDDAELIAMLEPLDHRDSSDRVKAERALNRRL 238 Query: 241 DGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G C+ IA +A + L+ G+V A DG V R + +GR+ A+ + + Sbjct: 239 QGGCQVPIAAYALLEDNDMLWLRGLVGAVDGTQVFRVEGRAPRSEGERLGRELAEDLLAL 298 Query: 300 SNKNVF 305 V Sbjct: 299 GADKVL 304 >gi|296532729|ref|ZP_06895413.1| hydroxymethylbilane synthase [Roseomonas cervicalis ATCC 49957] gi|296266947|gb|EFH12888.1| hydroxymethylbilane synthase [Roseomonas cervicalis ATCC 49957] Length = 368 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 117/319 (36%), Positives = 166/319 (52%), Gaps = 26/319 (8%) Query: 5 PFRIGTRCSPLALAHAFETRSSL-MDVHKIP---------PHNIVIIPLSTKGDRITNRT 54 P R+GTR SPLAL ++TR+ L + +H P H I +T GDRI ++ Sbjct: 56 PLRVGTRGSPLAL---WQTRTFLELVLHFCPVLRNAKAFEEHVI-----ATSGDRIQDKR 107 Query: 55 LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI--- 111 L +IGGKGLF +EI + L+ G ID AVHS KD+ T+L G+ ++ L RED RD + Sbjct: 108 LADIGGKGLFAKEIHEALLDGRIDFAVHSLKDLETELPPGIVLACTLRREDARDTLVLGP 167 Query: 112 ----SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH 167 + A + + IGT+SLRR+A LL R D+ V RG + +RL KL + Sbjct: 168 GAADADPADPFSAIPAGARIGTASLRRQAQLLHARPDLKVEMIRGNVGSRLAKLAGGECD 227 Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227 LLA AG+KRL E +L+ E P+ GQG + + + + EL+ I Sbjct: 228 GTLLALAGLKRLGLESHASVVLDAEAMVPAAGQGIVGVTVRAADTELHELLSGIEDRTAR 287 Query: 228 DSVNCERAFLAELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286 ERA LA LDGSC++ I G A G L+ G+V DG + S +G +A Sbjct: 288 AVSRAERALLAALDGSCRTPIGGHARLLPGGELHLTGLVARPDGSFLLKRSLHGAAGEAE 347 Query: 287 NIGRDAAQYIRFISNKNVF 305 IGR+ + +R S ++F Sbjct: 348 RIGRELGESLRADSPADIF 366 >gi|332701796|ref|ZP_08421884.1| Porphobilinogen deaminase [Desulfovibrio africanus str. Walvis Bay] gi|332551945|gb|EGJ48989.1| Porphobilinogen deaminase [Desulfovibrio africanus str. Walvis Bay] Length = 316 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 107/299 (35%), Positives = 160/299 (53%), Gaps = 2/299 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A +S L++ H + ++ L T+GD+I + L ++GGKGLF +E Sbjct: 7 IATRGSMLALWQAEHVKSMLVERHS--GLEVELLMLKTQGDKILDVPLAKVGGKGLFVKE 64 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ L+ G D AVHS KD+PT+L +GL I RE+ D +S +L L +VI Sbjct: 65 IEEALLDGRADLAVHSMKDVPTELPEGLIIGVTPKREEPADALLSVRYDNLAALPEGAVI 124 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSS RR+A LL R D + RG + TRL KL + + AI+LA AG+ RL E Sbjct: 125 GTSSFRRQAQLLMRRPDFEIKMLRGNVNTRLRKLMDGEYDAIVLAMAGLNRLGLSAPKME 184 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L DF P+ QG + IE ++ + +++ ++H +T V ER FL L+G C+ Sbjct: 185 VLGPPDFLPAVSQGVLGIEYRRDDAELADMLAFMDHPETRVRVQAERGFLTALEGGCQVP 244 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 IAG+A +G + G+V DG+ R+ A +G A+ + + + Sbjct: 245 IAGYAEVRGDEVRLTGLVADLDGRRVIRRERSSPAGQAWELGETLAREVLDAGGREILE 303 >gi|85858418|ref|YP_460620.1| porphobilinogen deaminase [Syntrophus aciditrophicus SB] gi|123738772|sp|Q2LQU2|HEM3_SYNAS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|85721509|gb|ABC76452.1| porphobilinogen deaminase [Syntrophus aciditrophicus SB] Length = 306 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 159/291 (54%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LAL + + L + P ++ I+ + T GD + L +IGGKGLF Sbjct: 1 MKIGTRGSALALTQTRQIAARLQGQY--PEMHLEIVVIKTSGDIQKDVPLAKIGGKGLFI 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L++G +D AVHS KD+P +L +GLQI+A RED RDV IS + +L + Sbjct: 59 KEIEEALLAGTVDLAVHSMKDLPAELPEGLQIAAVPRREDPRDVLISGICREFDNLPAGA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGT SLRR L WR D+ ++ RG ++TR+ K+ +++A AGI+R+ + + Sbjct: 119 RIGTGSLRRSVQLRDWRPDLEIVPLRGNLDTRIRKVAQAALDGVVVAAAGIRRMGWAEKV 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + E P+ GQG +C+ET + + + + + T V ERAFL L G C Sbjct: 179 TQFIPTEKMLPAVGQGVLCLETREEDEDLKAGLAFLEDKRTRREVTAERAFLRRLGGGCT 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +A FA +G L G+V + + + G+ A+++G + A+ + Sbjct: 239 LPVAAFAEQRGDVLTIRGMVGSLNERTMIRQEIYGSVEQAVDLGTELAERL 289 >gi|257124843|ref|YP_003162957.1| porphobilinogen deaminase [Leptotrichia buccalis C-1013-b] gi|257048782|gb|ACV37966.1| porphobilinogen deaminase [Leptotrichia buccalis C-1013-b] Length = 322 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 118/315 (37%), Positives = 171/315 (54%), Gaps = 22/315 (6%) Query: 8 IGTRCSPLALAHAFETRSSLMDVH----------------KIPPHNIVIIPLSTKGDRIT 51 IGTR S LALA A + + L+ + K P I + + TKGD+ Sbjct: 8 IGTRGSILALAQAEKVKEMLIKKYDELRENENFCEIEGFDKKNPLEIELKVIVTKGDKDL 67 Query: 52 NRTLTEIGG---KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRD 108 R T+I G K LF +EIEK+++ +ID AVHS KDMP +GL + + RED RD Sbjct: 68 -RDFTKIKGTTQKDLFVKEIEKEMLENKIDLAVHSLKDMPQNTPEGLLNACFPMREDNRD 126 Query: 109 VFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA 168 V +S + LK+L +SVIGT S+RR+ LL R+D+ + RG I TRL KL++ + A Sbjct: 127 VLVSKNGKKLKELDENSVIGTGSIRREKELLNLRNDVKIKAIRGNIHTRLKKLDDGEYDA 186 Query: 169 ILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD 228 I+LA AG+KR+ E I E + + F P+PGQG +CI+ N+ K + L+K+IN ++ Sbjct: 187 IVLAAAGLKRVGLENRITEYFDKDSFMPAPGQGILCIQCRENDNKIRHLLKIINDDEVTI 246 Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 ER F DG C + I + +G+TL G+ + +IF EV GNR + Sbjct: 247 MCKAEREFSKIFDGGCHTPIGCSSVIEGNTLKLKGMFNDNGIRIFKEVE--GNRENPKET 304 Query: 289 GRDAAQYIRFISNKN 303 + A+ I+ KN Sbjct: 305 AQKLAEEIKKEEMKN 319 >gi|258541892|ref|YP_003187325.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-01] gi|256632970|dbj|BAH98945.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-01] gi|256636027|dbj|BAI01996.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-03] gi|256639082|dbj|BAI05044.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-07] gi|256642136|dbj|BAI08091.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-22] gi|256645191|dbj|BAI11139.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-26] gi|256648246|dbj|BAI14187.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-32] gi|256651299|dbj|BAI17233.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654290|dbj|BAI20217.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-12] Length = 357 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 118/322 (36%), Positives = 169/322 (52%), Gaps = 25/322 (7%) Query: 5 PFRIGTRCSPLALAH--AFETRSS-----LMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57 P R+GTR SPLAL AF T + L D+ H I +T GD++ NR L E Sbjct: 39 PLRVGTRGSPLALVQTRAFLTTLTRFCPVLRDMGAFQEHQI-----NTTGDQVQNRRLAE 93 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI--SHTA 115 IGGKGLF +EI + L G ID AVHS KD+ T L GL ++ L RED RD I A Sbjct: 94 IGGKGLFAKEIHEALADGRIDFAVHSLKDLETTLPPGLVLACTLKREDARDALILSPGLA 153 Query: 116 QSLKD-----LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAIL 170 QS D L ++IG +S+RR+A +L R D+ RG ++TRL+KL ++ A L Sbjct: 154 QSDPDDPYSALPEGALIGCASVRRQAQMLHVRPDLKFGLLRGNVQTRLDKLAAHQCQATL 213 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 LA AG+KRL + +L+ P+ GQG + + ++ + +EL+ I + Sbjct: 214 LALAGLKRLGMAERASIVLDPTVMVPAAGQGIVGVTVREDDIELRELLSAIEDYEARAVA 273 Query: 231 NCERAFLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284 ER+ LAELDGSC++ I G+A + L+ G+V DG + S G D Sbjct: 274 TAERSLLAELDGSCRTPIGGYAQLIPIVAGEDPKLHLTGLVAREDGSFLLKRSITGLPED 333 Query: 285 AINIGRDAAQYIRFISNKNVFN 306 A +G++ + +R S ++F Sbjct: 334 AARLGKELGESLRKDSPSDIFE 355 >gi|229586831|ref|YP_002845332.1| porphobilinogen deaminase [Rickettsia africae ESF-5] gi|259646263|sp|C3PNS9|HEM3_RICAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|228021881|gb|ACP53589.1| Porphobilinogen deaminase [Rickettsia africae ESF-5] Length = 351 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 103/255 (40%), Positives = 152/255 (59%), Gaps = 19/255 (7%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLAL H T + + + P N I+P+ T GD I N+ L +IGGK LF Sbjct: 6 RIGTRKSPLALIH---TNLVIQQIKQFFPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++ Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRL------ 176 Query: 186 KEILNIE--------DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 E+ N E P GQG I +E ++ E+ INH T++ + ERAFL Sbjct: 177 -EVFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFL 235 Query: 238 AELDGSCKSAIAGFA 252 LD +C++ IA ++ Sbjct: 236 EYLDANCRTPIAAYS 250 >gi|294670387|ref|ZP_06735269.1| hypothetical protein NEIELOOT_02105 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307851|gb|EFE49094.1| hypothetical protein NEIELOOT_02105 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 312 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 104/293 (35%), Positives = 166/293 (56%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL++IGGKGL Sbjct: 5 KKLVIASRESMLAMWQAEHIKGRLKALY--PDCEVEILGMTTRGDQILDRTLSKIGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ L G D AVHS KD+P +L +G ++A R D F+S+ L+++ Sbjct: 63 FIKELEQALQDGRADLAVHSIKDVPMELPEGFALAAIGERASPFDAFVSNQYARLEEMPE 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+A L +++ RG ++TRL+KL+N A++LA AG++RL + Sbjct: 123 GAIVGTSSLRREAQLRAKFPHLTIQPLRGNVQTRLSKLDNGDYDAVILAAAGLQRLGLDS 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+EIL+ D P+ GQGA+ IE ++++ +NHE+T V ERA L GS Sbjct: 183 RIREILSPADSLPAAGQGALGIEIAARRTDLADILRPLNHEETAACVTAERALARALGGS 242 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ +A + + L G+V DG + E S A +GR A+ + Sbjct: 243 CQVPLAAYCVMEDGLLTLNGLVGHPDGSVIIEASAQAPDAYANALGRAVAKRL 295 >gi|124514859|gb|EAY56370.1| Porphobilinogen deaminase [Leptospirillum rubarum] Length = 314 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 110/271 (40%), Positives = 152/271 (56%), Gaps = 4/271 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M P +IG+R S LAL A S + V + P +VI T GD I +R L+E+GG Sbjct: 1 MLPTPLKIGSRGSELALWQARHVASLIESVSGVLPEIVVI---KTTGDIILDRQLSEVGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L+ EID AVHS KD+P L GL ++A L RED RDVF+S +K Sbjct: 58 KGLFVKEIEEALLRKEIDLAVHSMKDVPAFLPPGLTLAATLTREDPRDVFLSPHYPDIKS 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR A + R+D+ I RG + TR+ K+ AI+LA AG+ RL Sbjct: 118 LPQKARVGTSSLRRLAQIREIRNDLEFIPLRGNVGTRIRKMEEGVVDAIILAGAGLLRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++E ++ P+ GQGA+ +E ++ LV+ ++ E T SV ER L L Sbjct: 178 HANRVREWISPRVLLPAIGQGALGLEIRTDDETTGTLVRSLSDESTHLSVAAERGVLQSL 237 Query: 241 DGSCKSAIAGFA-YCKGSTLYFYGIVLASDG 270 +G C+ IA +A + K TL G VL G Sbjct: 238 NGGCQVPIAAYAVWEKNRTLSLEGRVLDISG 268 >gi|268317443|ref|YP_003291162.1| porphobilinogen deaminase [Rhodothermus marinus DSM 4252] gi|262334977|gb|ACY48774.1| porphobilinogen deaminase [Rhodothermus marinus DSM 4252] Length = 312 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 106/299 (35%), Positives = 168/299 (56%), Gaps = 7/299 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +GTR S LAL A RS ++ + ++ + + T GD I + L +IG Sbjct: 1 MPEPTLILGTRGSALALRQATLIRS-FLEARGV---SVQVEIIRTTGDHIQDVPLAKIGA 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT--AQSL 118 KGLFT+E+++ L+ G ID AVHS KD+PT++ +GL ++A R DVF++H A L Sbjct: 57 KGLFTKELDQALLEGRIDLAVHSLKDLPTEMPEGLVVAAVPERAPPWDVFVAHPDFAGRL 116 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +DL +V+ TSSLRR+A L WRSD+ V+ RG ++TRL KL H ++LA AG++R Sbjct: 117 EDLPTGAVVATSSLRRQAQLRAWRSDLQVVPVRGNVDTRLRKLEAEGWHGLILAEAGLQR 176 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + +++ + E P+ GQGA+ + N + + L++ ++H T +V ERA L Sbjct: 177 LGLLERVRQRIAPEILLPAVGQGALGVVCAEANRRVRALLQALHHAPTAAAVRAERALLH 236 Query: 239 ELDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L G C+ +A A + TL G V++ DG+ E + G + +G A+ + Sbjct: 237 ALQGGCQVPVAALAAVEADGTLVLRGRVVSLDGRQLVEGVQRGAMAEPEAVGEALAETL 295 >gi|134094241|ref|YP_001099316.1| porphobilinogen deaminase [Herminiimonas arsenicoxydans] gi|133738144|emb|CAL61189.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Herminiimonas arsenicoxydans] Length = 317 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 108/277 (38%), Positives = 159/277 (57%), Gaps = 2/277 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LA+ A R L ++ P I I+ ++T+GD+I +RTL+++GGKGL Sbjct: 7 KKLVIASRESRLAMWQAEHVREKLALLY--PQCAIEILGMTTRGDQILDRTLSKVGGKGL 64 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E + D AVHS KD+P L +G ++A L RED RD F+S+ SL DL Sbjct: 65 FVKELEVAIAERRADLAVHSLKDVPMSLPEGFALAAVLEREDPRDAFVSNDYASLDDLPD 124 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+AL+ + + RG ++TRL KL+ + AI+LA AG+KRL + Sbjct: 125 GAIVGTSSLRRQALIAARYPKLVIRPLRGNLDTRLGKLDKGEYAAIILAAAGLKRLGMPQ 184 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ +L+ E P+PGQGA+ IE H + QE + +NHE T +V ER GS Sbjct: 185 RIRAVLDPEQSLPAPGQGAMGIEIHADRADLQEWLAPLNHEATAQAVTAERTVSRNFGGS 244 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 C+ +A FA + T+ ++ DGK NG Sbjct: 245 CQIPLAAFATIENGTMRLRAMIATPDGKRVARADLNG 281 >gi|158520980|ref|YP_001528850.1| porphobilinogen deaminase [Desulfococcus oleovorans Hxd3] gi|226740631|sp|A8ZWG5|HEM3_DESOH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|158509806|gb|ABW66773.1| porphobilinogen deaminase [Desulfococcus oleovorans Hxd3] Length = 310 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 108/294 (36%), Positives = 157/294 (53%), Gaps = 7/294 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LA+ L K I+P+ T+GD++ N + +IG KG+FT Sbjct: 3 IRIGSRKSSLAMWQTCYVEDKL----KQSGITTSILPIDTRGDQVLNVAIAKIGSKGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKDLALH 124 EE+E KL G+ID AVHSAKDMP+ L G ++ A+ RE+ DV +SH + D + Sbjct: 59 EELEAKLADGDIDIAVHSAKDMPSVLPDGFELIAFTDREEPADVLVSHKKDLDISDSSRP 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IGTSS+RR+ALL R+ + +D RG ++TR+ K+ AIL+AYAGI R+ + + Sbjct: 119 VTIGTSSVRRQALLGRFYPHVRTVDIRGNVQTRVLKMKEGLCDAILMAYAGIHRMGMDDL 178 Query: 185 IKEILNIEDFPPSPGQGAICIE--THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + + F P GQG I +E + + K + + INH + + ERAFL L+G Sbjct: 179 IVHTFSPDTFIPPVGQGCIAVEASSRLAAEKKEAIRACINHPASETCLLAERAFLKRLEG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C A G L G +++ DGK F +R G A IG D ++ Sbjct: 239 GCSIPAFALARLNGDRLTLSGGLMSLDGKKFIFNTRAGAGSQATAIGTDLGNHV 292 >gi|328676207|gb|AEB27077.1| Porphobilinogen deaminase [Francisella cf. novicida Fx1] Length = 300 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 102/268 (38%), Positives = 155/268 (57%), Gaps = 3/268 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQSELNIPCE---ISTMKTQGDIILDQPLNKIGGKAL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 59 FMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ + Sbjct: 119 GAVVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELVE 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271 C AI +A + + +V +SDGK Sbjct: 239 CHVAIGAYAELYNNQITLMAMVASSDGK 266 >gi|85374658|ref|YP_458720.1| porphobilinogen deaminase [Erythrobacter litoralis HTCC2594] gi|84787741|gb|ABC63923.1| porphobilinogen deaminase [Erythrobacter litoralis HTCC2594] Length = 292 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 102/254 (40%), Positives = 147/254 (57%), Gaps = 3/254 (1%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 +A A ETR+ L H + ++P+ GD+I +R L EIGGK L+T+E++ L G Sbjct: 1 MAQAVETRNRLCAAHGWDEEAVELVPVVASGDKIQDRPLAEIGGKALWTKELDAWLGEGR 60 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 ID AVHS KD+ T + L I+A LPRED RDV + A ++D+ + +GTS+ RR A Sbjct: 61 IDAAVHSMKDVETFRPEALHIAAILPREDKRDVLVG--AAGIEDIPKGAKVGTSAPRRAA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 +L R D+ V+ FRG + TRL KL +A LLA AG+KRL E I L ++++ P Sbjct: 119 QMLSLRPDVEVVTFRGNVATRLGKLEAGEADVTLLAAAGLKRL-GELDIGSPLELDEWLP 177 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + QGAI IE ++ A+ L+ I+H + + ERA LA L+G+C S IA A G Sbjct: 178 AAAQGAIGIECRADDAGARALLSPIDHAPSRAEIMAERALLAGLNGTCHSPIAVLAEAMG 237 Query: 257 STLYFYGIVLASDG 270 + L + + DG Sbjct: 238 NRLSIRATLYSPDG 251 >gi|56707415|ref|YP_169311.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis SCHU S4] gi|110669886|ref|YP_666443.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis FSC198] gi|224456493|ref|ZP_03664966.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis MA00-2987] gi|254370888|ref|ZP_04986893.1| hydroxymethylbilane synthase [Francisella tularensis subsp. tularensis FSC033] gi|254874253|ref|ZP_05246963.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis MA00-2987] gi|61213244|sp|Q5NI31|HEM3_FRATT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123169616|sp|Q14JI3|HEM3_FRAT1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|56603907|emb|CAG44892.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella tularensis subsp. tularensis SCHU S4] gi|110320219|emb|CAL08275.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella tularensis subsp. tularensis FSC198] gi|151569131|gb|EDN34785.1| hydroxymethylbilane synthase [Francisella tularensis subsp. tularensis FSC033] gi|254840252|gb|EET18688.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis MA00-2987] gi|282158558|gb|ADA77949.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella tularensis subsp. tularensis NE061598] Length = 300 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 103/268 (38%), Positives = 155/268 (57%), Gaps = 3/268 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQLELNIPCE---ISTMKTQGDIILDQPLNKIGGKAL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 59 FMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ + Sbjct: 119 GAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELVE 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271 C AI +A + + +V +SDGK Sbjct: 239 CHVAIGAYAELDNNQITLMAMVASSDGK 266 >gi|319763492|ref|YP_004127429.1| porphobilinogen deaminase [Alicycliphilus denitrificans BC] gi|317118053|gb|ADV00542.1| porphobilinogen deaminase [Alicycliphilus denitrificans BC] Length = 309 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 100/257 (38%), Positives = 146/257 (56%), Gaps = 4/257 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P I TR S LAL A E +L+ H++ ++ ++T+GD+I +RTL+++GGKGLF Sbjct: 9 PIVIATRESQLALWQA-EHVQALLAARG---HSVSLLGMTTRGDQILDRTLSKVGGKGLF 64 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G ++ + RED RD F+S SL +L Sbjct: 65 VKELEVALEEGRADIAVHSLKDVPMELPDGFALACVMEREDPRDAFVSPHHASLDELPQG 124 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL + Sbjct: 125 AVVGTSSLRRQVLLQALRPDLKIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHER 184 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + P+ GQGA+ IE ++ + + HE TW +V ERA + GSC Sbjct: 185 IRSVFEPGQMLPAAGQGALGIEIRSQRQDLRDALAPLAHERTWLTVTAERAVSRAMGGSC 244 Query: 245 KSAIAGFAYCKGSTLYF 261 +A G TL Sbjct: 245 SMPLAAHGVWSGDTLRL 261 >gi|154148130|ref|YP_001406461.1| porphobilinogen deaminase [Campylobacter hominis ATCC BAA-381] gi|166201500|sp|A7I1S0|HEM3_CAMHC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|153804139|gb|ABS51146.1| porphobilinogen deaminase [Campylobacter hominis ATCC BAA-381] Length = 308 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 115/297 (38%), Positives = 170/297 (57%), Gaps = 8/297 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LAL + ++ + + ++ + + + TKGD I + L +IGGKGLFT Sbjct: 4 LRIATRGSALALWQSKYIQNLIENNTEV---EVELQSMKTKGDVILDTPLAKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ ++ GE D AVHS KD+P KGL ++A RED+RD F+S S +L + Sbjct: 61 KELEESMLRGESDLAVHSLKDVPVVFPKGLILTAISEREDVRDSFVSEKFASFNELPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT+SLRRK LL R D+ +I RG I TRL KL N+ AI+LA AG+KRL + I Sbjct: 121 KVGTTSLRRKMQLLIKRPDLKIISLRGNINTRLRKLKENEFDAIILASAGLKRLNLMENI 180 Query: 186 KEIL--NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 K + ++++ P+ GQGA+ IE V+ + E++K IN+E++ + ER F+A+L+G Sbjct: 181 KYFVPFSLDEMIPAMGQGALGIEC-VDKSEVIEILKFINNENSVIATTIERDFVAKLNGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C+ I A G + IV DG F + R ++ D N G A FIS Sbjct: 240 CQVPIGVNAEISGDIIKVRAIVGLPDGSEFIKDKREISKADFKNFGTKLAD--EFIS 294 >gi|87117968|gb|ABD20291.1| HemC [Shigella boydii] Length = 272 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 103/270 (38%), Positives = 150/270 (55%), Gaps = 2/270 (0%) Query: 27 LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKD 86 LM H P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD Sbjct: 1 LMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKD 58 Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDIS 146 +P + +GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ Sbjct: 59 VPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLI 118 Query: 147 VIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206 + RG I TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE Sbjct: 119 IRSLRGNIGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIE 178 Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVL 266 +++ + +EL+ +NH +T V ERA L+G C+ I +A ++ +V Sbjct: 179 CRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVG 238 Query: 267 ASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 A DG R G DA +G A+ + Sbjct: 239 APDGSQIIRGERRGAPQDAEQMGISLAEEL 268 >gi|114308050|gb|ABI59293.1| hydroxymethylbilane synthase [Nitrosomonas eutropha C91] Length = 334 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 108/263 (41%), Positives = 154/263 (58%), Gaps = 2/263 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LAL A RS L++++ P +I I+ ++TKGD+I + +L++IGGKGLF +E Sbjct: 35 IASRESQLALWQANFIRSRLLELY--PQTDITILGMTTKGDQILDVSLSKIGGKGLFIKE 92 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P + G +++A RED RD F+S+ SL++L SV+ Sbjct: 93 LELALEDGRADIAVHSMKDVPMIVPSGFRLAAITEREDPRDAFVSNDFTSLEELPTGSVV 152 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL+ I Sbjct: 153 GTSSLRRESQLRARFPHLQVRPLRGNVQTRLRKLDEGEYSAIILAAAGLKRLELGYRISM 212 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 ++ E P+ GQGA+ IE N+P E +K ++H T V ERA L GSC+ Sbjct: 213 LIPPELSLPAVGQGALGIECRDNDPDMVEWMKPLHHATTAYCVEAERAMSRVLGGSCQVP 272 Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270 + GFA L G V DG Sbjct: 273 LGGFAEIFEGVLTLRGFVATPDG 295 >gi|87117964|gb|ABD20289.1| HemC [Shigella boydii] gi|87117966|gb|ABD20290.1| HemC [Shigella boydii] gi|87117982|gb|ABD20298.1| HemC [Shigella boydii] gi|87117986|gb|ABD20300.1| HemC [Shigella boydii] gi|87117990|gb|ABD20302.1| HemC [Shigella boydii] gi|87117994|gb|ABD20304.1| HemC [Shigella boydii] gi|87118012|gb|ABD20313.1| HemC [Shigella dysenteriae] Length = 272 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 102/270 (37%), Positives = 150/270 (55%), Gaps = 2/270 (0%) Query: 27 LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKD 86 LM H P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD Sbjct: 1 LMTSH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKD 58 Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDIS 146 +P + +GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ Sbjct: 59 VPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLI 118 Query: 147 VIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206 + RG + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE Sbjct: 119 IRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIE 178 Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVL 266 +++ + +EL+ +NH +T V ERA L+G C+ I +A ++ +V Sbjct: 179 CRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVG 238 Query: 267 ASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 A DG R G DA +G A+ + Sbjct: 239 APDGSQIIRGERRGAPQDAEQMGISLAEEL 268 >gi|269468208|gb|EEZ79901.1| porphobilinogen deaminase [uncultured SUP05 cluster bacterium] Length = 304 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 107/302 (35%), Positives = 169/302 (55%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A ++ L H P NI ++ ++T+GD+I N L++IGGKGL Sbjct: 3 KTLKIATRKSPLALWQAEHVKTRLETHH--PDLNIELVKMTTQGDQILNSPLSKIGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++ G D AVHS KDMP ++ +G + A L RE+ D F+S+ ++ DL Sbjct: 61 FIKELEVGMMEGVADIAVHSMKDMPYEIPQGFALGAILKRENPFDAFVSNHFDNIDDLPQ 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GT S+RR L R D+ ++D RG + TRL KL++ + AI+LA AG+ RL E Sbjct: 121 CAKVGTCSMRRIVQLKAIRPDLEILDLRGNVNTRLKKLDDGEYDAIILACAGLIRLGFED 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 IK+ ++ E P+ GQGA+ IE N+ + +L+ + +T V+ ERA +L+G Sbjct: 181 RIKQQISPEQSLPAVGQGAVGIEIRENDQEILDLITPLIDVETTHRVSAERAMNEKLEGG 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C IAGF+ + + G+V D + G+ A +G + A + + ++ Sbjct: 241 CSVPIAGFSTIDNNQMTLTGLVGNVDTGTILKQQVCGDVAKAEALGVELADKLLSLGARD 300 Query: 304 VF 305 V Sbjct: 301 VL 302 >gi|330824252|ref|YP_004387555.1| Porphobilinogen deaminase [Alicycliphilus denitrificans K601] gi|329309624|gb|AEB84039.1| Porphobilinogen deaminase [Alicycliphilus denitrificans K601] Length = 309 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 100/257 (38%), Positives = 146/257 (56%), Gaps = 4/257 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P I TR S LAL A E +L+ H++ ++ ++T+GD+I +RTL+++GGKGLF Sbjct: 9 PIVIATRESQLALWQA-EHVQALLAARG---HSVSLLGMTTRGDQILDRTLSKVGGKGLF 64 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G ++ + RED RD F+S SL +L Sbjct: 65 VKELEVALEEGRADIAVHSLKDVPMELPDGFALACIMEREDPRDAFVSPHHASLDELPQG 124 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL + Sbjct: 125 AVVGTSSLRRQVLLQALRPDLKIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHER 184 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + P+ GQGA+ IE ++ + + HE TW +V ERA + GSC Sbjct: 185 IRSVFEPGQMLPAAGQGALGIEIRSQRQDLRDALAPLAHERTWLTVTAERAVSRAMGGSC 244 Query: 245 KSAIAGFAYCKGSTLYF 261 +A G TL Sbjct: 245 SMPLAAHGVWSGDTLRL 261 >gi|155241760|gb|ABT18042.1| porphobilinogen deaminase [Heliobacillus mobilis] Length = 314 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 106/305 (34%), Positives = 162/305 (53%), Gaps = 3/305 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++P IGTR S LAL + L ++ P + + TKGD+I + L +IG KG Sbjct: 5 QRPVVIGTRDSALALWQTNWVMARLKEL--FPEQAFEVKAIKTKGDKILDVALAKIGDKG 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E ++ GEID AVHS KD+PT L +GL I A RED RD+ IS L L Sbjct: 63 LFTKELEVSMLEGEIDMAVHSLKDLPTVLPEGLTIGAMCVREDCRDILISRHG-GLDALP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GT+SLRRKA + + R D+ ++D RG ++TRL K+ ++LA AG+ RL Sbjct: 122 QGARVGTASLRRKAQIWQVRPDLELLDIRGNLQTRLRKMEEQNLDGLILAAAGVIRLGWA 181 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I + + ++ P+ GQG+I IE + + ++V +NH +T S+ ERA + L+G Sbjct: 182 EKISQYIPVDMCLPAVGQGSIGIEIREGDDEIAKIVGALNHYETSVSIRAERALMRTLEG 241 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I + L GIV + DGK G+ +G A+ + + Sbjct: 242 GCQVPIGSLGRLQEGRLVLDGIVASLDGKHVARGREEGDPSQPEEVGIRLAEQLLQQGAR 301 Query: 303 NVFNF 307 + N Sbjct: 302 EILNV 306 >gi|94501432|ref|ZP_01307951.1| porphobilinogen deaminase [Oceanobacter sp. RED65] gi|94426397|gb|EAT11386.1| porphobilinogen deaminase [Oceanobacter sp. RED65] Length = 310 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 106/289 (36%), Positives = 160/289 (55%), Gaps = 2/289 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +I TR S LAL A +S L H + ++ + T+GD+I + L +IGGKGLF Sbjct: 4 LKIATRSSKLALWQAEFVKSELEKFHS--DLQVELVKIKTQGDKILDTPLAKIGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E +++G+ D AVHS KD+P + +GL +S RE D F+S+ Q DL + Sbjct: 62 KELETAMLNGDADIAVHSMKDVPMEFPEGLGLSVICEREMPTDAFVSNHYQRFLDLPQGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+ +L R D+ V RG ++TRL KL+ + AI+LA AG+ RL+ E+ + Sbjct: 122 HVGTSSLRRQCQVLAARPDLKVSSLRGNVQTRLGKLDAGEFDAIILASAGLLRLELEERV 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E ++ E P+ GQGA+ IE +++ Q+L+ ++H DT V ERA L G C+ Sbjct: 182 AEHMSDEISLPAGGQGAVGIECRMDDEVTQKLLAPLHHSDTASRVYAERALNKRLQGGCQ 241 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 IA +A L+ G+V + DG G A +G AA+ Sbjct: 242 VPIACYATLNDGELHLRGLVGSEDGSRIIRTEIRGPESQAEQLGIQAAE 290 >gi|296046581|gb|ADG86432.1| hydroxymethylbilane synthase [Francisella novicida] Length = 317 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 108/298 (36%), Positives = 160/298 (53%), Gaps = 4/298 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M++ RI TR S LAL A ++ L H N+ ++P++TKGD I + L ++GG Sbjct: 1 MKQTTVRIATRKSALALWQAEYVKAQLEHFHD--GINVELVPMTTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + PRED RD F+S+T +SL D Sbjct: 59 KGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEVICPREDPRDAFVSNTIKSLSD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+ RL+ Sbjct: 119 LPQGSIVGTSSLRRQCQLKASRPDLDIRDLRGNVNTRLRKLDEGQYDAIILAAAGLIRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I + + E+ P+ GQGA+ IE ++ + L+ + T V ERA L Sbjct: 179 MSERIAQFIEPEEMLPANGQGAVGIECRNDDATIKALLAPLECATTRIRVLAERAMNRAL 238 Query: 241 DGSCKSAIA--GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 G C+ I G G ++ G+V + DG E G + +G AQ + Sbjct: 239 QGGCQVPIGSYGVISADGKNIHLRGLVGSVDGSEMIESEITGPVEEGEALGNKLAQEL 296 >gi|258645838|ref|ZP_05733307.1| hydroxymethylbilane synthase [Dialister invisus DSM 15470] gi|260403210|gb|EEW96757.1| hydroxymethylbilane synthase [Dialister invisus DSM 15470] Length = 307 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 167/289 (57%), Gaps = 2/289 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A + + D + P + ++P++TKGD+I +R+L EIGGKGLF +E Sbjct: 7 IATRESLLALWQAEHVKKRIEDTY--PEIQVELLPVTTKGDQILDRSLLEIGGKGLFIKE 64 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +EK L+ + D AVHS KDM + GL+++A RED RD F+S SL++L +V+ Sbjct: 65 LEKLLLEKKADIAVHSLKDMTAVIPDGLKLAAVTAREDPRDAFVSLEYGSLQELPEGAVV 124 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A LL D+ + RG ++TRL L+ A++LA AG+KRL ++ I+ Sbjct: 125 GTSSLRRQAQLLHLWPDLQIKTLRGNVQTRLRHLDEGNYDAVILAAAGLKRLGLQERIQS 184 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 ++ D P+ GQG + IET + + + E+++ I+ E + ERAFL ++ G CK Sbjct: 185 YISTCDSIPAAGQGVMAIETRIGDDETMEIIQFIHDEKVASCIMAERAFLEKVGGDCKVP 244 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +A + + + DGK ++ S NG DA +G A+ + Sbjct: 245 AGIYAVPFLGHIEAVAFIGSPDGKEMYKRSLNGQTQDAKQLGESLAEAL 293 >gi|319942681|ref|ZP_08016988.1| hydroxymethylbilane synthase [Sutterella wadsworthensis 3_1_45B] gi|319803764|gb|EFW00699.1| hydroxymethylbilane synthase [Sutterella wadsworthensis 3_1_45B] Length = 309 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 99/259 (38%), Positives = 154/259 (59%), Gaps = 4/259 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR SPLA+ A ++ L D + P + ++ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 9 IATRESPLAMWQALHVQALLRD--RYPGAEVELLGMTTRGDQILDRTLSKVGGKGLFVKE 66 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E ++ G D AVHS KD+P +L +G ++ A RED RD F+S SL D+ + + Sbjct: 67 LEAAMLEGRADLAVHSLKDVPMELPEGFELVAVSEREDPRDAFVSPKYASLDDMPAGARV 126 Query: 128 GTSSLRRKALLLRWR-SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 GT+SLRR+ L+LR R + V+ RG + TRL KL+ + A+++A AG+KRL I+ Sbjct: 127 GTASLRRE-LMLRMRYPHLEVLPVRGNVGTRLRKLDEGQFDALVMASAGLKRLGLGDRIR 185 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 +I+ E P+PGQGA+ IE + K + + IN +T ERA L GSC+ Sbjct: 186 QIIPAEVSLPAPGQGALGIEIRKGDEKMEAALGFINSPETRACCMAERAVSRALGGSCQV 245 Query: 247 AIAGFAYCKGSTLYFYGIV 265 +A +A + L+ +V Sbjct: 246 PLAAYAVVENGELWLRALV 264 >gi|87117974|gb|ABD20294.1| HemC [Shigella boydii] gi|87117976|gb|ABD20295.1| HemC [Shigella boydii] gi|87117978|gb|ABD20296.1| HemC [Shigella boydii] gi|87117980|gb|ABD20297.1| HemC [Shigella boydii] gi|87117984|gb|ABD20299.1| HemC [Shigella boydii] gi|87117988|gb|ABD20301.1| HemC [Shigella boydii] gi|87117992|gb|ABD20303.1| HemC [Shigella boydii] gi|87117996|gb|ABD20305.1| HemC [Shigella boydii] gi|87118006|gb|ABD20310.1| HemC [Shigella dysenteriae] gi|87118010|gb|ABD20312.1| HemC [Shigella dysenteriae] gi|87118016|gb|ABD20315.1| HemC [Shigella dysenteriae] gi|87118020|gb|ABD20317.1| HemC [Shigella dysenteriae] gi|87118036|gb|ABD20325.1| HemC [Shigella flexneri] gi|87118042|gb|ABD20328.1| HemC [Escherichia coli] gi|87118044|gb|ABD20329.1| HemC [Escherichia coli] Length = 272 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 102/270 (37%), Positives = 150/270 (55%), Gaps = 2/270 (0%) Query: 27 LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKD 86 LM H P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD Sbjct: 1 LMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKD 58 Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDIS 146 +P + +GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ Sbjct: 59 VPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLI 118 Query: 147 VIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206 + RG + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE Sbjct: 119 IRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIE 178 Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVL 266 +++ + +EL+ +NH +T V ERA L+G C+ I +A ++ +V Sbjct: 179 CRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVG 238 Query: 267 ASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 A DG R G DA +G A+ + Sbjct: 239 APDGSQIIRGERRGAPQDAEQMGISLAEEL 268 >gi|313637685|gb|EFS03063.1| porphobilinogen deaminase [Listeria seeligeri FSL S4-171] Length = 274 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 105/255 (41%), Positives = 149/255 (58%), Gaps = 5/255 (1%) Query: 45 TKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPRE 104 TKGDRI + TL+++GGKGLF E+E+ L G ID AVHS KD+P+ + +GL I A RE Sbjct: 7 TKGDRILDVTLSKVGGKGLFVSEVEQALSDGAIDFAVHSMKDVPSSIKEGLTIGAIPKRE 66 Query: 105 DIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN 164 D F+ +T +S DL +VIGTSSLRR A +LR R D + RG I+TRL KL++ Sbjct: 67 SALDCFVFNTVESFHDLPTAAVIGTSSLRRAAQILRQRPDFVIKPIRGNIDTRLQKLHDE 126 Query: 165 KAHAILLAYAGIKR---LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221 AI+LA AG+ R L+ + E ++ E P+ GQGA+ IE N+ + +++ I Sbjct: 127 NFDAIILAKAGLSRMGWLENTTLKLEDISPELCLPAVGQGALAIECRENDKQICDMLASI 186 Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281 +HE+T V ER FL +L+G C+ IAGFA + F G+V +DG G Sbjct: 187 HHEETGICVEAERVFLKKLNGGCEIPIAGFATKTAGQIKFKGLVGNADGSTILSAENIGE 246 Query: 282 RCDAINIGRDAAQYI 296 + + IG A+ + Sbjct: 247 --NPMTIGNQVAEAL 259 >gi|46199940|ref|YP_005607.1| porphobilinogen deaminase [Thermus thermophilus HB27] gi|55980314|ref|YP_143611.1| porphobilinogen deaminase [Thermus thermophilus HB8] gi|55976454|sp|Q72H57|HEM3_THET2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|81600541|sp|Q5SLE8|HEM3_THET8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|46197567|gb|AAS81980.1| porphobilinogen deaminase [Thermus thermophilus HB27] gi|55771727|dbj|BAD70168.1| porphobilinogen deaminase [Thermus thermophilus HB8] Length = 301 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 109/290 (37%), Positives = 160/290 (55%), Gaps = 8/290 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LALA L + P I + T+GD+ + I F +E Sbjct: 6 VGTRGSALALAQTRFVVERLKETW--PETEFKIRTIKTRGDQGASPREEAI-----FVKE 58 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I++ L+S EID AVHS KD+PT+ +GL+I++ R+D RDVF+ A+ LKDL +V+ Sbjct: 59 IQEALLSREIDIAVHSLKDLPTESPRGLKIASVPRRQDPRDVFLGKAAKRLKDLPPGAVV 118 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSS+RRKA +L R D+ V D RG ++TRL L N + I+LA AG+ RL I E Sbjct: 119 GTSSVRRKAQILALRPDLVVRDLRGNVDTRLAALGNGEYDGIVLAAAGLIRLDLRNRIDE 178 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 L+ + P+PGQGA+ +E + A+EL ++H ++ V ERAFL L C + Sbjct: 179 FLDPGEVLPAPGQGALALEVREGDDLAEELCYALHHPPSYHRVRAERAFLRGLGAGCLAP 238 Query: 248 IAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + A+ + TL G++L DGK F G+ +A +G D A+ + Sbjct: 239 VGALAHVEEDGTLRLEGVLLTPDGKSFIRAEIEGDVSEAEELGLDLARDV 288 >gi|162219161|ref|YP_747258.2| porphobilinogen deaminase [Nitrosomonas eutropha C91] Length = 308 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 108/263 (41%), Positives = 154/263 (58%), Gaps = 2/263 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LAL A RS L++++ P +I I+ ++TKGD+I + +L++IGGKGLF +E Sbjct: 9 IASRESQLALWQANFIRSRLLELY--PQTDITILGMTTKGDQILDVSLSKIGGKGLFIKE 66 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P + G +++A RED RD F+S+ SL++L SV+ Sbjct: 67 LELALEDGRADIAVHSMKDVPMIVPSGFRLAAITEREDPRDAFVSNDFTSLEELPTGSVV 126 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL+ I Sbjct: 127 GTSSLRRESQLRARFPHLQVRPLRGNVQTRLRKLDEGEYSAIILAAAGLKRLELGYRISM 186 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 ++ E P+ GQGA+ IE N+P E +K ++H T V ERA L GSC+ Sbjct: 187 LIPPELSLPAVGQGALGIECRDNDPDMVEWMKPLHHATTAYCVEAERAMSRVLGGSCQVP 246 Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270 + GFA L G V DG Sbjct: 247 LGGFAEIFEGVLTLRGFVATPDG 269 >gi|223044144|ref|ZP_03614183.1| porphobilinogen deaminase [Staphylococcus capitis SK14] gi|222442538|gb|EEE48644.1| porphobilinogen deaminase [Staphylococcus capitis SK14] Length = 309 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 105/292 (35%), Positives = 171/292 (58%), Gaps = 6/292 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + L V P +I I + TKGD+I ++ L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQSQQFIDKLKKVD--PDLDIEIKEIVTKGDQIVDKQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+ +L + EID A+HS KD+P+ + +GL + RE D +IS L +L S++ Sbjct: 64 IQNELFNKEIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHTPLSELTEGSIV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ + ++ Sbjct: 124 GTSSLRRGAQILSKYPHLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDDIVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ + P+ GQGA+ IE ++ + EL+K ++++D V ER FL+E+DGSC+ Sbjct: 184 TYLDKDVLLPAIGQGALGIECRSDDKELLELLKKVHNQDVAQCVTAERTFLSEMDGSCQV 243 Query: 247 AIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 I G+A G + F G+++ DGK +E + G D + +G++ ++ ++ Sbjct: 244 PIGGYATIDGDKQIEFTGLIMTPDGKERYEHTAKG--LDPVELGQEVSRVLK 293 >gi|87117998|gb|ABD20306.1| HemC [Shigella dysenteriae] gi|87118030|gb|ABD20322.1| HemC [Shigella flexneri] gi|87118032|gb|ABD20323.1| HemC [Shigella flexneri] Length = 272 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 102/270 (37%), Positives = 150/270 (55%), Gaps = 2/270 (0%) Query: 27 LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKD 86 LM H P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD Sbjct: 1 LMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKD 58 Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDIS 146 +P + +GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ Sbjct: 59 VPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLI 118 Query: 147 VIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206 + RG + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE Sbjct: 119 IRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIE 178 Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVL 266 +++ + +EL+ +NH +T V ERA L+G C+ I +A ++ +V Sbjct: 179 CRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVG 238 Query: 267 ASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 A DG R G DA +G A+ + Sbjct: 239 APDGSQIIRGERRGAPQDAEQMGISLAEEL 268 >gi|149928342|ref|ZP_01916583.1| porphobilinogen deaminase [Limnobacter sp. MED105] gi|149822927|gb|EDM82172.1| porphobilinogen deaminase [Limnobacter sp. MED105] Length = 310 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 105/280 (37%), Positives = 157/280 (56%), Gaps = 3/280 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R S LA+ A R L+ + + + I+ ++TKGD+I +R+L +IGGKGLF Sbjct: 3 IRIASRESRLAMWQAEHVRDLLLALPGV--SGVEIVGMTTKGDQILDRSLAKIGGKGLFI 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P + Q+ ++ RED D F+S+ SL DL + Sbjct: 61 KELEYALLEGRADLAVHSGKDIPMDVDPEFQLLGFMTREDPHDAFVSNDYASLADLPAGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+G+SSLRR+A +L + V RG ++TRL KL++ + AI+LA AG+KRL I Sbjct: 121 VVGSSSLRRQAQVLARYPHLKVEPLRGNLDTRLGKLDSGQYQAIVLAAAGLKRLGLHSRI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ D P+ GQGA+ +E + + ELVK + V+ ER+ L GSC+ Sbjct: 181 RNVIESTDMLPAVGQGALGLEIRAGDSQLAELVKPLIDPVCTALVSAERSVSKALGGSCQ 240 Query: 246 SAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCD 284 IAG+A T G+V + DGK E S + D Sbjct: 241 VPIAGYATLNDAQTFTLRGLVASPDGKAVIEKSAQASLQD 280 >gi|58699644|ref|ZP_00374329.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila ananassae] gi|58533839|gb|EAL58153.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila ananassae] Length = 267 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 104/256 (40%), Positives = 148/256 (57%), Gaps = 6/256 (2%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +IGTR S LA+ A E + L+D P +I I+ + T GD+ N L EIGGKGLF + Sbjct: 4 KIGTRGSKLAVVQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFIK 61 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE +L+ ID AVHS KD+P GL I L R D FISH SL+ L + Sbjct: 62 EIEAELLENNIDMAVHSLKDVPAFFSWGLTIPCVLERLSPCDAFISHKHNSLESLPQQAT 121 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 I TS++RRK LL +R D++++ RG + TR L N I+LA AG+ RL+K +I Sbjct: 122 IATSAIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLIT 178 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E+L + + GQGAICI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC + Sbjct: 179 EVLPPKVMLSAVGQGAICIQCRRNDVKIIDLLEKINNNMSFIGVKSERSFMKTVNGSCFT 238 Query: 247 AIAGFA-YCKGSTLYF 261 +A A Y + LY Sbjct: 239 PLAALAEYVSENMLYL 254 >gi|315645740|ref|ZP_07898864.1| porphobilinogen deaminase [Paenibacillus vortex V453] gi|315279218|gb|EFU42528.1| porphobilinogen deaminase [Paenibacillus vortex V453] Length = 318 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 107/293 (36%), Positives = 164/293 (55%), Gaps = 12/293 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + L + K ++ + + TKGDRI + TL+++GGKGLF Sbjct: 6 VGSRQSALALTQTGQVIDDLKRLAKEHGLDYDFTVKKIVTKGDRILDVTLSKVGGKGLFV 65 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ ++ GEID AVHS KDMP+ L +GL A R+D RD IS +L DL + Sbjct: 66 KEIEQAMLDGEIDMAVHSMKDMPSVLPEGLVSGAVPARKDPRDCLISKEGATLDDLPQGA 125 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR + L +R D+ + RG I++R+ K+ + AI+LA AG++R+ E I Sbjct: 126 KVGTSSLRRSSQLKAYRPDLQIDWIRGNIDSRIRKMEEGEFQAIVLATAGLQRMGWEDRI 185 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L +E P+ GQGA+ IE N+ + L+ + N E T +V ER FL+EL+G C+ Sbjct: 186 TSHLPVEISLPAVGQGALGIECRENDSELLHLLSLYNDEVTARTVAAERKFLSELNGGCQ 245 Query: 246 SAIAGFAYCKG----------STLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 I +A K + + G+V + DG+I + S G +++ + Sbjct: 246 VPIGAYAILKNVDTGDSRGEQNVIQLTGMVGSPDGEIILKESAEGTDPESLGV 298 >gi|226311390|ref|YP_002771284.1| porphobilinogen deaminase [Brevibacillus brevis NBRC 100599] gi|259647803|sp|C0ZAH1|HEM3_BREBN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226094338|dbj|BAH42780.1| porphobilinogen deaminase [Brevibacillus brevis NBRC 100599] Length = 309 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 107/284 (37%), Positives = 160/284 (56%), Gaps = 3/284 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +++GTR S LAL L P + + + TKGDRI + TL+++GGKGLF Sbjct: 4 WKVGTRRSKLALTQTNWVVDKLKGFA--PEADFELHEIVTKGDRILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L E D AVHS KDMP +L GL I A R D RDV +S ++L +L + Sbjct: 62 KEIEQSLFDKETDFAVHSLKDMPAELPDGLVIGAIPKRVDPRDVLLSKDGKTLDELPQGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR + +L +R DI + RG I+TR+ KL AI+LA AG++R+ E I Sbjct: 122 LVGTSSLRRSSQILAYRPDIQIESLRGNIDTRMRKLAEGNFDAIILAAAGLERVNFEGEI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L +E P+ GQGA+ IE ++ + L+K + T +V+ ER+FL +L G C+ Sbjct: 182 SQFLPVEISLPAVGQGALAIECRADDEETLALLKQFDDAPTRLAVSAERSFLHKLQGGCQ 241 Query: 246 SAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 I +A + + + G+V + DGK + + G A+ I Sbjct: 242 VPIGAYATVGENNEITLTGMVGSPDGKQMFKNTATGQDPLALGI 285 >gi|91205161|ref|YP_537516.1| porphobilinogen deaminase [Rickettsia bellii RML369-C] gi|157827501|ref|YP_001496565.1| porphobilinogen deaminase [Rickettsia bellii OSU 85-389] gi|122990935|sp|Q1RJN7|HEM3_RICBR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166217782|sp|A8GXC8|HEM3_RICB8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|91068705|gb|ABE04427.1| Porphobilinogen deaminase [Rickettsia bellii RML369-C] gi|157802805|gb|ABV79528.1| porphobilinogen deaminase [Rickettsia bellii OSU 85-389] Length = 300 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 105/252 (41%), Positives = 155/252 (61%), Gaps = 11/252 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH----NIVIIPLSTKGDRITNRTLTEIGGK 61 RIGTR S LAL T+++L+ + +I H N I+ ++T GD I N+ L +IGGK Sbjct: 5 IRIGTRKSKLAL-----TQTNLV-IEQIKQHFPNINCEIVEITTSGDLIQNKPLYDIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 LF +EIE+ L++ ++D AVHS KD+P + K L I A L RED RDVF+ T +S+++L Sbjct: 59 ALFLKEIEQALLNKKVDLAVHSLKDVPGIIPKDLSIEAVLEREDSRDVFVCLTHKSIEEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++VIGTSS+RRK + R R D+ +I FRG +++R+NKL N + A +LAYAG+KRL Sbjct: 119 PKNAVIGTSSVRRKLCVQRMRPDLEIIVFRGNVDSRINKLINKEVDATILAYAGLKRLNA 178 Query: 182 -EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ P GQG I IE ++ E+ K INH T++ + ERA L L Sbjct: 179 FNPEYCHLIEHSQMLPCIGQGVIAIEIRKDDHDMIEICKQINHLPTFELIKPERALLEYL 238 Query: 241 DGSCKSAIAGFA 252 D +C++ I ++ Sbjct: 239 DANCRTPIGAYS 250 >gi|118602764|ref|YP_903979.1| porphobilinogen deaminase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|226740639|sp|A1AX51|HEM3_RUTMC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|118567703|gb|ABL02508.1| porphobilinogen deaminase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 304 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 104/273 (38%), Positives = 156/273 (57%), Gaps = 3/273 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A + L H P ++++ ++TKGD+I N L++IGGKGL Sbjct: 3 KTLKIATRQSPLALWQAQNVKIRLEKHH--PDLTVILVEMTTKGDQILNSPLSKIGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++ G D AVHS KD+P ++ +G ++ A L RE+ D F+S+ S+ DL Sbjct: 61 FIKELEVSMMKGITDIAVHSMKDVPYEIPQGFKLGAILKRENPFDAFVSNDFSSIDDLPQ 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++ +GT S+RR L R D+ ++D RG + TRL KL+ I+LA AG+ RL E Sbjct: 121 NAKVGTCSIRRIVQLKAIRPDLKILDLRGNVNTRLKKLDKGGFDGIILACAGLIRLGFES 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 IK+ ++ + P+ GQG + IE N+ + +L+K + +T V+ ERA A L+G Sbjct: 181 RIKQQISDQQSLPAVGQGVVGIEIRENDTEILDLIKPLIDVETTYMVSAERAMNARLEGG 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASD-GKIFHE 275 C IAGFA + G+V D G I E Sbjct: 241 CSVPIAGFALIDNEQIMLTGLVGNVDTGVILKE 273 >gi|326574375|gb|EGE24318.1| porphobilinogen deaminase [Moraxella catarrhalis CO72] gi|326575506|gb|EGE25431.1| porphobilinogen deaminase [Moraxella catarrhalis 101P30B1] Length = 321 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 109/296 (36%), Positives = 163/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNRFEHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L Sbjct: 179 LHKRIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IAGFA + L G V + DGK + ++ I + AA+ + Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQL 294 >gi|218885688|ref|YP_002435009.1| porphobilinogen deaminase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226740632|sp|B8DKW2|HEM3_DESVM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|218756642|gb|ACL07541.1| porphobilinogen deaminase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 317 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 116/299 (38%), Positives = 160/299 (53%), Gaps = 8/299 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL A +S + H P ++ ++ L T+GD I + L ++GGKGL Sbjct: 2 KKLVIATRGSKLALWQAEHVKSCIEGQH--PGVSVELLVLKTRGDIILDVPLAKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+ G D AVHS KD+P +L +GL + RE+ D F+S SL L Sbjct: 60 FVKEIEEALLDGRADLAVHSMKDVPMELPEGLVLGIIPEREEPSDTFLSVHHDSLAALPH 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRR++ LL R D++V+ RG ++TRL KL+ + AI++A AG+KRL Sbjct: 120 GATVGTSSLRRQSQLLALRPDLNVVSLRGNVDTRLRKLSEGQFDAIIMATAGMKRLGLSA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 E+L F P+ GQGA+ IE + EL+ + H T V ER FLA L G Sbjct: 180 PRSEVLGPPAFLPAVGQGALGIEFRADRADLHELLAFMEHTPTRIRVEAERGFLAGLQGG 239 Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRD-AAQYI 296 C+ IAG A G T G+V G + NG + A IG D AAQ + Sbjct: 240 CQVPIAGHAVMTGDGTFALEGLVADLTGARVIRRTMNGVSAPDGAQARQIGLDLAAQLV 298 >gi|87117970|gb|ABD20292.1| HemC [Shigella boydii] gi|87118022|gb|ABD20318.1| HemC [Shigella flexneri] gi|87118024|gb|ABD20319.1| HemC [Shigella flexneri] gi|87118026|gb|ABD20320.1| HemC [Shigella flexneri] gi|87118028|gb|ABD20321.1| HemC [Shigella flexneri] gi|87118034|gb|ABD20324.1| HemC [Shigella flexneri] gi|87118038|gb|ABD20326.1| HemC [Shigella flexneri] gi|87118040|gb|ABD20327.1| HemC [Shigella flexneri] Length = 272 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 102/270 (37%), Positives = 150/270 (55%), Gaps = 2/270 (0%) Query: 27 LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKD 86 LM H P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD Sbjct: 1 LMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKD 58 Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDIS 146 +P + +GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ Sbjct: 59 VPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLI 118 Query: 147 VIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206 + RG + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE Sbjct: 119 IRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIE 178 Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVL 266 +++ + +EL+ +NH +T V ERA L+G C+ I +A ++ +V Sbjct: 179 CRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLCALVG 238 Query: 267 ASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 A DG R G DA +G A+ + Sbjct: 239 APDGSQIIRGERRGAPQDAEQMGISLAEEL 268 >gi|330720492|gb|EGG98789.1| Porphobilinogen deaminase [gamma proteobacterium IMCC2047] Length = 312 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 111/290 (38%), Positives = 157/290 (54%), Gaps = 3/290 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR S LAL A ++ L H+ + I + T+GD+I + L ++GG Sbjct: 1 MTNKLLRIATRGSQLALWQAEYVKARLEAAHENLQVELDI--MKTRGDKILDVPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL ++ RE D F+S+ S Sbjct: 59 KGLFVKELETALLEKRADIAVHSMKDVPMEFPEGLGLAVICEREQPTDAFVSNHFASFDS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R DI++ RG + TRL KL++ + AI+LA AG+ RL Sbjct: 119 LPQGAVVGTSSLRRQCHIRALRPDINIEFLRGNVNTRLAKLDDGQFDAIILASAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E L+IE P+ GQGA+ +E V++ L+ V++ EDT V ERA L Sbjct: 179 MGDRITEQLSIEQSLPAAGQGAVGVECRVDDKDTLALLSVLHDEDTSICVTAERAMNRHL 238 Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ IAGFA +G +Y G+V DG G DA IG Sbjct: 239 NGGCQVPIAGFAVLEEGGQVYLQGMVANPDGDEVLRAELRGPVADAEQIG 288 >gi|332089030|gb|EGI94141.1| porphobilinogen deaminase [Shigella boydii 3594-74] Length = 287 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 99/263 (37%), Positives = 147/263 (55%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 185 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245 Query: 274 HEVSRNGNRCDAINIGRDAAQYI 296 R G DA +G A+ + Sbjct: 246 IRGERRGAPQDAEQMGISLAEEL 268 >gi|87118008|gb|ABD20311.1| HemC [Shigella dysenteriae] gi|87118014|gb|ABD20314.1| HemC [Shigella dysenteriae] Length = 272 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 102/270 (37%), Positives = 149/270 (55%), Gaps = 2/270 (0%) Query: 27 LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKD 86 LM H P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD Sbjct: 1 LMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKD 58 Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDIS 146 +P + +GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ Sbjct: 59 VPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLI 118 Query: 147 VIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206 + RG + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE Sbjct: 119 IRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIE 178 Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVL 266 + + + +EL+ +NH +T V ERA L+G C+ I +A ++ +V Sbjct: 179 CRLGDARTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVG 238 Query: 267 ASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 A DG R G DA +G A+ + Sbjct: 239 APDGSQIIRGERRGAPQDAEQMGISLAEEL 268 >gi|326561756|gb|EGE12091.1| porphobilinogen deaminase [Moraxella catarrhalis 7169] Length = 321 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 109/296 (36%), Positives = 163/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNHFEHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L Sbjct: 179 LHKRIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IAGFA + L G V + DGK + ++ I + AA+ + Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQL 294 >gi|314933825|ref|ZP_07841190.1| hydroxymethylbilane synthase [Staphylococcus caprae C87] gi|313653975|gb|EFS17732.1| hydroxymethylbilane synthase [Staphylococcus caprae C87] Length = 309 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 105/292 (35%), Positives = 171/292 (58%), Gaps = 6/292 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + L V P +I I + TKGD+I ++ L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQSQQFIYKLKKVD--PDLDIEIKEIVTKGDQIVDKQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+ +L + EID A+HS KD+P+ + +GL + RE D +IS L +L S++ Sbjct: 64 IQNELFNKEIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHTPLSELTEGSIV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ + ++ Sbjct: 124 GTSSLRRGAQILSKYPHLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDDIVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ + P+ GQGA+ IE ++ + EL+K ++++D V ER FL+E+DGSC+ Sbjct: 184 TYLDKDVLLPAIGQGALGIECRSDDKELLELLKKVHNQDVAQCVTAERTFLSEMDGSCQV 243 Query: 247 AIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 I G+A G + F G+++ DGK +E + G D + +G++ ++ ++ Sbjct: 244 PIGGYATIDGDKQIEFTGLIMTPDGKERYEHTAKG--LDPVELGQEVSRVLK 293 >gi|225025796|ref|ZP_03714988.1| hypothetical protein EUBHAL_00021 [Eubacterium hallii DSM 3353] gi|224956880|gb|EEG38089.1| hypothetical protein EUBHAL_00021 [Eubacterium hallii DSM 3353] Length = 844 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 100/256 (39%), Positives = 154/256 (60%), Gaps = 7/256 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +IGTR S LAL + + P + I+ + TKGD+I +++LT GGKG Sbjct: 2 KNIIKIGTRKSKLALIQTDIVKDKIK--KAFPEIEVEIVKIDTKGDQILDKSLTSFGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT E+E +L+SG +D AVHSAKDMP +GL I A L R D+RD F++ T + L++L Sbjct: 60 VFTAELEAELLSGAVDIAVHSAKDMPMDFPEGLGIGAVLDRADVRDTFVTTTGKKLEELE 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--- 179 S++GTSSLRR+ L+ +++ RG ++TRL+KL + + I+LA AGI+RL Sbjct: 120 PGSIVGTSSLRRELLIKEINPYVTIKLLRGNVQTRLSKLRDGQYDGIILAAAGIERLGYE 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 K+E + + L+ + F P+ GQG + +E+ V + + E++ I+ E + ERAFL Sbjct: 180 KEEGLHYQYLDPDVFLPAAGQGILAVESRVEDAEMAEILAAIHSEKAECLLMAERAFLKT 239 Query: 240 LDGSCKSAIAGFAYCK 255 + GSC + A A C+ Sbjct: 240 IGGSCNAPAA--ALCR 253 >gi|291044525|ref|ZP_06570234.1| porphobilinogen deaminase [Neisseria gonorrhoeae DGI2] gi|293397661|ref|ZP_06641867.1| porphobilinogen deaminase [Neisseria gonorrhoeae F62] gi|291011419|gb|EFE03415.1| porphobilinogen deaminase [Neisseria gonorrhoeae DGI2] gi|291611607|gb|EFF40676.1| porphobilinogen deaminase [Neisseria gonorrhoeae F62] Length = 313 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 106/296 (35%), Positives = 167/296 (56%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 3 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 61 KGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 121 MPEGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 181 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 GSC+ +A + + L G+V DG I + A +GR A+ + Sbjct: 241 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKL 296 >gi|257453642|ref|ZP_05618932.1| porphobilinogen deaminase [Enhydrobacter aerosaccus SK60] gi|257449100|gb|EEV24053.1| porphobilinogen deaminase [Enhydrobacter aerosaccus SK60] Length = 319 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 103/268 (38%), Positives = 152/268 (56%), Gaps = 2/268 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR SPLAL A ++ L ++ P + ++P+ T+GD+I + L +IGGKGLF Sbjct: 7 LNIATRQSPLALWQAEHIQARLQALY--PSLTVNLVPMVTQGDKILDTPLAKIGGKGLFV 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L D AVHS KD+P L +GL + AY RE D FIS+ +SL L + Sbjct: 65 KELEQALYEKRADIAVHSLKDVPMVLPEGLTLGAYCEREQPTDAFISNHYESLDALPQGA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+ + ++R D+ +I RG + TRL+KL+ + AI+LA +G+ RL I Sbjct: 125 KLGTSSLRRQCQIQQYRPDLEIISLRGNVGTRLSKLDAGEYDAIILATSGLTRLGLTDRI 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L+ P+ GQGA+ IE ++ L+K +N E + V ERA L G C+ Sbjct: 185 RHELDTHISLPAVGQGALAIECRSDDADVLALLKPLNDEPSRLCVMAERAMNRHLQGGCQ 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIF 273 IAGFA + ++ G V + DGK Sbjct: 245 VPIAGFATIQDGQIHLQGRVGSVDGKTL 272 >gi|59800604|ref|YP_207316.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA 1090] gi|240013461|ref|ZP_04720374.1| porphobilinogen deaminase [Neisseria gonorrhoeae DGI18] gi|240117279|ref|ZP_04731341.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID1] gi|240120532|ref|ZP_04733494.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID24-1] gi|254493056|ref|ZP_05106227.1| porphobilinogen deaminase [Neisseria gonorrhoeae 1291] gi|260441191|ref|ZP_05795007.1| porphobilinogen deaminase [Neisseria gonorrhoeae DGI2] gi|268602974|ref|ZP_06137141.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID1] gi|59717499|gb|AAW88904.1| putative porphobilinogen deaminase [Neisseria gonorrhoeae FA 1090] gi|226512096|gb|EEH61441.1| porphobilinogen deaminase [Neisseria gonorrhoeae 1291] gi|268587105|gb|EEZ51781.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID1] Length = 311 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 106/296 (35%), Positives = 167/296 (56%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 GSC+ +A + + L G+V DG I + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKL 294 >gi|118496750|ref|YP_897800.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella tularensis subsp. novicida U112] gi|194324057|ref|ZP_03057832.1| porphobilinogen deaminase [Francisella tularensis subsp. novicida FTE] gi|208779979|ref|ZP_03247322.1| porphobilinogen deaminase [Francisella novicida FTG] gi|158512415|sp|A0Q481|HEM3_FRATN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|118422656|gb|ABK89046.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella novicida U112] gi|194321954|gb|EDX19437.1| porphobilinogen deaminase [Francisella tularensis subsp. novicida FTE] gi|208743983|gb|EDZ90284.1| porphobilinogen deaminase [Francisella novicida FTG] Length = 300 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 100/268 (37%), Positives = 155/268 (57%), Gaps = 3/268 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQSELNIPCE---ISTMKTQGDIILDQPLNKIGGKAL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E +++ + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 59 FMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ + Sbjct: 119 GAIVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELVE 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271 C AI +A + + +V +SDGK Sbjct: 239 CHVAIGAYAELDNNQITLMAMVASSDGK 266 >gi|304320177|ref|YP_003853820.1| porphobilinogen deaminase [Parvularcula bermudensis HTCC2503] gi|303299080|gb|ADM08679.1| porphobilinogen deaminase [Parvularcula bermudensis HTCC2503] Length = 324 Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 112/279 (40%), Positives = 155/279 (55%), Gaps = 12/279 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIP--------PHNIVIIPLSTKGDRITN 52 M KP RI +R SPLA+A A R L + I PH + T GDR+ N Sbjct: 1 MSFKPLRIASRRSPLAVAQALWVRDRLAEALGIDEVDRDAAFPHETFV----TTGDRMLN 56 Query: 53 RTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS 112 TL +IGGKGLFT+EIE L+ G+ D AVHS KDMP ++ GL ++A RED RD F++ Sbjct: 57 PTLADIGGKGLFTKEIEIALLDGQADIAVHSMKDMPAQMPPGLVLAAVPVREDPRDAFVT 116 Query: 113 HTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLA 172 + L + + IGTSS RR+A L R R D++++ RG + TRL KL +A LA Sbjct: 117 LDGRPLDQMPAGARIGTSSTRRRAQLARLRPDLALVPMRGNVGTRLQKLAAGEAEGTFLA 176 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 AG++RL V +E L+ P+ GQGA+C++ + + IN+ T + Sbjct: 177 EAGLRRLGMTDVKREALSPARMLPALGQGALCVQARSGDHETLSACAHINNRPTALAAAA 236 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 ERA ++ LDGSCK+ I G A G +L G +L DG+ Sbjct: 237 ERALISGLDGSCKTPIGGLARQTGDSLILEGQILTPDGR 275 >gi|317052496|ref|YP_004113612.1| porphobilinogen deaminase [Desulfurispirillum indicum S5] gi|316947580|gb|ADU67056.1| porphobilinogen deaminase [Desulfurispirillum indicum S5] Length = 308 Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 106/287 (36%), Positives = 161/287 (56%), Gaps = 11/287 (3%) Query: 8 IGTRCSPLALAHAFETRSSL---MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IGTR S LAL A ++ L D ++ I+ TKGD+I + L ++GGKGLF Sbjct: 5 IGTRASQLALWQAEHIKAELESRWDDVQVELKKII-----TKGDKILDSPLAKVGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE +LI G ID AVHS KD+PT+ +GL++ A RED RD FIS +S+ +L Sbjct: 60 VKEIENELIDGTIDIAVHSMKDVPTEFPEGLELFAITEREDPRDAFISRNGKSMAELGQQ 119 Query: 125 S--VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 IGTSSLRR+A LL +++ RG ++TRL ++ + I+LA AG+KRL+ E Sbjct: 120 KDVTIGTSSLRRQAQLLTLYPHWNIVSIRGNVQTRLKRMEERQMDGIILAAAGMKRLELE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++KE + E P+ GQGA+ +E + +E ++ + H T V ERA L ++G Sbjct: 180 HLVKEYIAPEVMIPAIGQGALGLEVRSADTALKERLEFLRHPVTTQCVLAERALLRTMEG 239 Query: 243 SCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 C+ I +A K +++ +V + DGK + GN + + + Sbjct: 240 GCQVPIGAYAVPKENGSVFLNALVASVDGKEVVKGQLEGNNPEELGV 286 >gi|30248604|ref|NP_840674.1| porphobilinogen deaminase [Nitrosomonas europaea ATCC 19718] gi|39931498|sp|Q82WS2|HEM3_NITEU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|30180199|emb|CAD84501.1| Porphobilinogen deaminase [Nitrosomonas europaea ATCC 19718] Length = 308 Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 112/290 (38%), Positives = 160/290 (55%), Gaps = 2/290 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LAL A R L++++ P +I I+ ++TKGD+I + +L++IGGKGLF +E Sbjct: 9 IASRESQLALWQANFIRGRLLELY--PQTDITILGMTTKGDQILDVSLSKIGGKGLFIKE 66 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P + G ++A RED RD F+S+ SL++L SV+ Sbjct: 67 LELALEDGRADIAVHSMKDVPMIVPSGFTLAAITEREDPRDAFVSNDFSSLEELPAGSVV 126 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL+ I Sbjct: 127 GTSSLRRESQLRARFPHLQVRPLRGNVQTRLRKLDEGEYSAIILAAAGLKRLELGYRISM 186 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L E P+ GQGA+ IE N+P E +K ++H T V ERA L GSC+ Sbjct: 187 LLPPELSLPAVGQGALGIECRDNDPDMVEWMKPLHHAATACCVEAERAMSRMLGGSCQVP 246 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + GFA L G V DG G +G+ AQ ++ Sbjct: 247 LGGFAEIFEDVLTLRGFVATPDGSRMIADKLCGKPESGEQVGQQLAQNLK 296 >gi|88797646|ref|ZP_01113235.1| porphobilinogen deaminase [Reinekea sp. MED297] gi|88779818|gb|EAR11004.1| porphobilinogen deaminase [Reinekea sp. MED297] Length = 313 Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 104/265 (39%), Positives = 157/265 (59%), Gaps = 2/265 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A ++ L H P + ++ +STKGD+I + L+++GGKGLF Sbjct: 5 VRIATRKSPLALWQAEFVKAELEKHH--PDLQVELVKISTKGDQILDVALSKVGGKGLFI 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E + +GE D AVHS KD+P ++ G +++ RE+ D F+S+ S+ DL + Sbjct: 63 KELEVAMEAGEADMAVHSMKDVPMEMPAGFELATICERENPFDAFVSNDFDSIDDLPQGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+A +L R D+ V RG + TRL KL++ + AI+LA AG+ RL + I Sbjct: 123 VLGTSSLRRQAQILAHRPDLDVRFLRGNVGTRLGKLDDGEYQAIVLACAGLIRLDLQARI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ + P+ GQGA+ IE + +E ++ ++HE+T V+ ERA L+G C+ Sbjct: 183 RQEIPGNLSLPAVGQGAVGIEIRAGDIALKERLQPLSHENTTLRVSAERAMNRVLNGGCE 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270 IAG+A L G V A DG Sbjct: 243 VPIAGYAVLDDQVLKLEGRVGAVDG 267 >gi|270158066|ref|ZP_06186723.1| porphobilinogen deaminase [Legionella longbeachae D-4968] gi|289163669|ref|YP_003453807.1| Porphobilinogen deaminase HemC [Legionella longbeachae NSW150] gi|269990091|gb|EEZ96345.1| porphobilinogen deaminase [Legionella longbeachae D-4968] gi|288856842|emb|CBJ10653.1| Porphobilinogen deaminase HemC [Legionella longbeachae NSW150] Length = 310 Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 112/312 (35%), Positives = 167/312 (53%), Gaps = 12/312 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLAL A R L++ K P NI ++P++T GD+ L +GG Sbjct: 1 MNSRIIRIATRQSPLALWQANYVRQLLLN--KWPKLNIELLPMTTSGDKFLKDKLLAVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ D AVHS+KDMP + GL ++A R++ D +SH SL+ Sbjct: 59 KGLFVKELEEALLDKRADFAVHSSKDMPAEFPHGLCLAAICKRDNPFDALVSHHYTSLQT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++IGT+SLRR++ LL +RSD+ V RG I TRL KL + AI+LA +G++R+ Sbjct: 119 LPERAIIGTASLRRQSQLLAYRSDLCVKPLRGNINTRLEKLRAGEYQAIILAASGLERMG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 VI E L E P+ GQGA+ IE ++ + LV +N + V+ ER A+L Sbjct: 179 FTHVITEQLPTEIMLPACGQGALAIECRTDDQETLALVAELNDPISSLCVHTERQVNAQL 238 Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGK---------IFHEVSRNGNRCDAINIGR 290 G+C +A F + + L +L DG F + + +RC I + Sbjct: 239 GGNCHIPLAVFCTPIEKNQLLLQAKILTIDGSQTIADTQMGSFAQATNMADRCSQSLIAQ 298 Query: 291 DAAQYIRFISNK 302 AA + +S + Sbjct: 299 GAANLLASVSPR 310 >gi|326562302|gb|EGE12628.1| porphobilinogen deaminase [Moraxella catarrhalis 103P14B1] gi|326563079|gb|EGE13352.1| porphobilinogen deaminase [Moraxella catarrhalis 12P80B1] gi|326571711|gb|EGE21724.1| porphobilinogen deaminase [Moraxella catarrhalis BC8] gi|326578075|gb|EGE27935.1| porphobilinogen deaminase [Moraxella catarrhalis O35E] Length = 321 Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 108/296 (36%), Positives = 163/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNHFEHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL Sbjct: 119 LPTGAILGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L Sbjct: 179 LHKRIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IAGFA + L G V + DGK + ++ I + AA+ + Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQL 294 >gi|172058146|ref|YP_001814606.1| porphobilinogen deaminase [Exiguobacterium sibiricum 255-15] gi|254800251|sp|B1YJV1|HEM3_EXIS2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|171990667|gb|ACB61589.1| porphobilinogen deaminase [Exiguobacterium sibiricum 255-15] Length = 308 Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 98/246 (39%), Positives = 146/246 (59%), Gaps = 3/246 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LA+ L P+ I + TKGDRI + TL+++GGKGLF +E Sbjct: 6 VGSRSSKLAMTQTKWVIEQLKQAGA--PYEFEIKNIITKGDRILDVTLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+++I +ID AVHS KD+P++L GL I A R D RD I+ T L L +++ Sbjct: 64 IEQQMIDEDIDFAVHSMKDLPSELPTGLIIGATPSRVDARDALITTTGGGLDSLPEGAIV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR + LL+ R D+ + RG I+TRL KL ILLA AG++R+ E ++ Sbjct: 124 GTSSLRRGSQLLKLRPDLKIESIRGNIDTRLEKLKTGPFDGILLAAAGLQRMGWSEDIVS 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E ++ +D P+ GQG + IE N+ + ++L+ +I+ + T ER+FLA ++GSC Sbjct: 184 EYISTDDMIPAVGQGILAIECRANDQEVRDLLNLIHDQMTEKVAFAERSFLAAIEGSCHV 243 Query: 247 AIAGFA 252 + GFA Sbjct: 244 PVGGFA 249 >gi|157964647|ref|YP_001499471.1| porphobilinogen deaminase [Rickettsia massiliae MTU5] gi|189028151|sp|A8F1Y8|HEM3_RICM5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157844423|gb|ABV84924.1| Porphobilinogen deaminase [Rickettsia massiliae MTU5] Length = 351 Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 99/248 (39%), Positives = 151/248 (60%), Gaps = 5/248 (2%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLAL H T + + + P N I+P+ T GD I N+ L +IGGK LF Sbjct: 6 RIGTRKSPLALIH---TNLVIQQIKQFFPDINCKIVPIITSGDLIQNKPLYDIGGKALFL 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++ Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-EKV 184 VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+ Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLEAFNPE 182 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ P GQG I +E ++ ++ INH T++ + ERAFL LD +C Sbjct: 183 YCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLKICNQINHLPTFELIKPERAFLEYLDANC 242 Query: 245 KSAIAGFA 252 ++ IA ++ Sbjct: 243 RTPIAAYS 250 >gi|268594132|ref|ZP_06128299.1| porphobilinogen deaminase [Neisseria gonorrhoeae 35/02] gi|268596184|ref|ZP_06130351.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA19] gi|268547521|gb|EEZ42939.1| porphobilinogen deaminase [Neisseria gonorrhoeae 35/02] gi|268549972|gb|EEZ44991.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA19] Length = 313 Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 106/296 (35%), Positives = 167/296 (56%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 3 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 61 KGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 121 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 181 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 GSC+ +A + + L G+V DG I + A +GR A+ + Sbjct: 241 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKL 296 >gi|71278494|ref|YP_266842.1| porphobilinogen deaminase [Colwellia psychrerythraea 34H] gi|123733846|sp|Q48AW8|HEM3_COLP3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|71144234|gb|AAZ24707.1| porphobilinogen deaminase [Colwellia psychrerythraea 34H] Length = 317 Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 108/298 (36%), Positives = 158/298 (53%), Gaps = 4/298 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR S LAL A ++ L H N+ ++P++TKGD I + L ++GG Sbjct: 1 MNNTTVRIATRKSALALWQAEYVKAQLEHFHD--GINVELVPMTTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + PRED RD F+S+T +SL D Sbjct: 59 KGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEVICPREDPRDAFVSNTIKSLSD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+ RL+ Sbjct: 119 LPQGSIVGTSSLRRQCQLKASRPDLDIRDLRGNVNTRLRKLDEGQYDAIILAAAGLIRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I + + E+ P+ GQGA+ IE ++ + L+ + T V ERA L Sbjct: 179 MSERIAQFIEPEEMLPANGQGAVGIECRNDDATIKALLAPLECATTRIRVLAERAMNRAL 238 Query: 241 DGSCKSAIA--GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 G C+ I G G ++ G+V + DG E G + +G AQ + Sbjct: 239 QGGCQVPIGSYGVISADGKNIHLRGLVGSVDGSEMIESEITGPVEEGEALGNKLAQEL 296 >gi|167626913|ref|YP_001677413.1| porphobilinogen deaminase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189028091|sp|B0TW04|HEM3_FRAP2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|167596914|gb|ABZ86912.1| Hydroxymethylbilane synthase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 300 Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 105/291 (36%), Positives = 166/291 (57%), Gaps = 5/291 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LAL + + I I + T+GD I ++ L +IGGK L Sbjct: 2 KQIVIASRESKLALWQTNYVKDRIQQELNIRCQ---INTMKTQGDIILDKPLNKIGGKAL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E +++ + D AVHS KD+P +L +G +S+++PRED RD F+S+ S+ DL Sbjct: 59 FMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLSSFMPREDPRDAFVSNKYSSIDDLPR 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ + Sbjct: 119 GAIVGTSSLRRKAQLLHYRYDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELNE 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +E P+ GQG + IE + + + ++ +N D++ ERAF EL G Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALDKSSEILQKLQKLNCSDSFCVATAERAFNQELKGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 C AI +A + + +V +SDGK + G+ D + +G+ AQ Sbjct: 239 CHVAIGAYAELHDNQITLTAMVASSDGKNILKRKLTGD--DPMRLGKLLAQ 287 >gi|326569020|gb|EGE19089.1| porphobilinogen deaminase [Moraxella catarrhalis BC1] Length = 321 Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 108/296 (36%), Positives = 163/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNHFEHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL Sbjct: 119 LPTGAILGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L Sbjct: 179 LHKRIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IAGFA + L G V + DGK + ++ I + AA+ + Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSRKLMGEIQLDEQAAEQL 294 >gi|229163420|ref|ZP_04291371.1| Porphobilinogen deaminase [Bacillus cereus R309803] gi|228619989|gb|EEK76864.1| Porphobilinogen deaminase [Bacillus cereus R309803] Length = 309 Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 115/293 (39%), Positives = 167/293 (56%), Gaps = 10/293 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS +S KDLA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGESFKDLAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + +V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWDGEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLSHMNDAVTERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + IAG+A + + +V + DG + + + G D + +G +AA + Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVLLKETVAGT--DPVEVGLEAADRL 292 >gi|194097777|ref|YP_002000818.1| porphobilinogen deaminase [Neisseria gonorrhoeae NCCP11945] gi|239998278|ref|ZP_04718202.1| porphobilinogen deaminase [Neisseria gonorrhoeae 35/02] gi|240015900|ref|ZP_04722440.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA6140] gi|240080040|ref|ZP_04724583.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA19] gi|240114994|ref|ZP_04729056.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID18] gi|240122831|ref|ZP_04735787.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID332] gi|240125027|ref|ZP_04737913.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-92-679] gi|240127540|ref|ZP_04740201.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-93-1035] gi|268600662|ref|ZP_06134829.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID18] gi|268681446|ref|ZP_06148308.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID332] gi|268683614|ref|ZP_06150476.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-92-679] gi|268685917|ref|ZP_06152779.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-93-1035] gi|193933067|gb|ACF28891.1| porphobilinogen deaminase [Neisseria gonorrhoeae NCCP11945] gi|268584793|gb|EEZ49469.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID18] gi|268621730|gb|EEZ54130.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID332] gi|268623898|gb|EEZ56298.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-92-679] gi|268626201|gb|EEZ58601.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-93-1035] gi|317163558|gb|ADV07099.1| porphobilinogen deaminase [Neisseria gonorrhoeae TCDC-NG08107] Length = 311 Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 106/296 (35%), Positives = 167/296 (56%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 GSC+ +A + + L G+V DG I + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKL 294 >gi|254366979|ref|ZP_04983015.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella tularensis subsp. holarctica 257] gi|134252805|gb|EBA51899.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella tularensis subsp. holarctica 257] Length = 300 Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 102/268 (38%), Positives = 154/268 (57%), Gaps = 3/268 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I + S LAL ++ + IP I + T+GD I ++ L +IGGK L Sbjct: 2 KQITIASGESKLALWQTNFVKNRIQSELNIPCE---ISTMKTQGDIILDQPLNKIGGKAL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 59 FMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ + Sbjct: 119 GAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELVE 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271 C AI +A + + +V +SDGK Sbjct: 239 CHVAIGAYAELDNNQITLMAMVASSDGK 266 >gi|332750972|gb|EGJ81377.1| porphobilinogen deaminase [Shigella flexneri 4343-70] gi|332751059|gb|EGJ81463.1| porphobilinogen deaminase [Shigella flexneri K-671] Length = 286 Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 99/263 (37%), Positives = 147/263 (55%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 5 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 64 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 65 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 125 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTR 184 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 185 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLCALVGAPDGSQI 244 Query: 274 HEVSRNGNRCDAINIGRDAAQYI 296 R G DA +G A+ + Sbjct: 245 IRGERRGAPQDAEQMGISLAEEL 267 >gi|254375261|ref|ZP_04990741.1| hydroxymethylbilane synthase [Francisella novicida GA99-3548] gi|151572979|gb|EDN38633.1| hydroxymethylbilane synthase [Francisella novicida GA99-3548] Length = 300 Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 100/268 (37%), Positives = 155/268 (57%), Gaps = 3/268 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQSELNIPCE---ISTMKTQGDIILDQPLNKIGGKAL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E +++ + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 59 FMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ + Sbjct: 119 GAIVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELVE 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271 C AI +A + + +V +SDGK Sbjct: 239 CHVAIGAYAELYNNQITLMAMVASSDGK 266 >gi|309784521|ref|ZP_07679159.1| porphobilinogen deaminase [Shigella dysenteriae 1617] gi|308927627|gb|EFP73096.1| porphobilinogen deaminase [Shigella dysenteriae 1617] Length = 286 Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 99/263 (37%), Positives = 147/263 (55%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 5 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 64 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 65 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 125 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 184 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 185 TRELLVALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 244 Query: 274 HEVSRNGNRCDAINIGRDAAQYI 296 R G DA +G A+ + Sbjct: 245 IRGERRGAPQDAEQMGISLAEEL 267 >gi|119469646|ref|ZP_01612515.1| porphobilinogen deaminase [Alteromonadales bacterium TW-7] gi|119446893|gb|EAW28164.1| porphobilinogen deaminase [Alteromonadales bacterium TW-7] Length = 312 Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 106/293 (36%), Positives = 161/293 (54%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RI TR S LAL A ++ L H + ++P+ST+GD I + L +IGGKGL Sbjct: 6 KLVRIATRKSALALWQAEFVKAQLEHFHD--DVRVELVPMSTQGDIILDTPLAKIGGKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ ++ G D AVHS KD+P + +GL + RED RD F+S+ +L +L Sbjct: 64 FVKELEQAMLDGRADIAVHSMKDVPVEFPEGLALHTICEREDPRDAFVSNHFANLNELPE 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR+ + R D+ + D RG + TRL KL+ + AI+LA AG+ RL+ + Sbjct: 124 GAVVGTSSLRRQCQIRALRPDLEIRDLRGNVNTRLAKLDAGQYDAIILAAAGLIRLEMGE 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + E P+ GQGA+ IE + + + L+ + H T VN ERA L+G Sbjct: 184 RIADYIEPEVSLPANGQGAVGIECRIEDEVTKALLAPLEHTHTRIRVNAERAMNRRLEGG 243 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ I +A ++ G+V A DG G+ DA +G + A+ + Sbjct: 244 CQVPIGAYALVDSEQVHLRGLVGAIDGSEILRDEVAGHINDAEKLGIELAEKL 296 >gi|332978074|gb|EGK14812.1| hydroxymethylbilane synthase [Desmospora sp. 8437] Length = 367 Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 105/290 (36%), Positives = 158/290 (54%), Gaps = 5/290 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPP-HNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +GTR S LA+ + D ++P + + + T+GD+I N TL+++GGKGLF + Sbjct: 64 VGTRRSQLAVTQTQWVMEQVRD--RLPQGWQMEMEKMVTRGDQILNVTLSKVGGKGLFVK 121 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE+ L+ G ID AVHS KDMP ++ +GL A RED RD +S + L DL ++ Sbjct: 122 EIEQALLDGRIDFAVHSMKDMPGEMPEGLIFGAVTRREDPRDCLLSRKGEGLDDLPENAC 181 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSSLRR+A LL +R D+ V RG + TR KL + + AI+LA AGI R+ + Sbjct: 182 VGTSSLRRQAQLLAYRPDLRVEPVRGNLNTRYQKLMDGQFDAIILAQAGIARMDWTDKVT 241 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 +++ E P+ GQGA+ ++ ++ + EL+ +N T +V ER FL +G C Sbjct: 242 QVVPEEVMLPAVGQGALAVQCRRDDQELLELLAEVNDPVTERAVTAERTFLQAFEGGCHL 301 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 IAG A G + G+V G G D + +GR A+ + Sbjct: 302 PIAGRATVDGERIRLRGLVAHPSGTPILREEAEG--ADPVELGRRLAREL 349 >gi|254372115|ref|ZP_04987608.1| hydroxymethylbilane synthase [Francisella tularensis subsp. novicida GA99-3549] gi|151569846|gb|EDN35500.1| hydroxymethylbilane synthase [Francisella novicida GA99-3549] Length = 300 Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 100/267 (37%), Positives = 154/267 (57%), Gaps = 3/267 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQSELNIPCE---ISTMKTQGDIILDQPLNKIGGKAL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 59 FMKELEIAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ + Sbjct: 119 GAIVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELVE 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG 270 C AI +A + + +V +SDG Sbjct: 239 CHVAIGAYAELYNNQITLMAMVASSDG 265 >gi|149186168|ref|ZP_01864482.1| porphobilinogen deaminase [Erythrobacter sp. SD-21] gi|148830199|gb|EDL48636.1| porphobilinogen deaminase [Erythrobacter sp. SD-21] Length = 292 Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 101/256 (39%), Positives = 144/256 (56%), Gaps = 3/256 (1%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 +A A ETR+ L H + ++P+ GD++ +R L +IGGK L+T E++ L G Sbjct: 1 MAQAHETRARLCAAHSWDEARVELVPVIASGDKVQDRPLADIGGKALWTRELDIWLAEGR 60 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 ID AVHS KD+ T G+ I+A LPRED DV + T SL+ + + +GTS+ RR A Sbjct: 61 IDAAVHSMKDVETIRPDGIAIAAILPREDKADVLLGAT--SLEAIPQGAKVGTSAPRRAA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 LL R D+ V+ RG + TR+ KL +A A LA AG+ RL EK + L ED+ P Sbjct: 119 QLLYARPDLEVVGIRGNVATRMAKLQAGEADATFLAAAGLVRL-GEKSVGVRLEPEDWLP 177 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 +P Q AI IE ++ +AQE++ I+H + + V ERA L L G+C S IA +G Sbjct: 178 APAQAAIGIECRASDERAQEVLAAIDHAHSREEVFAERALLEGLGGTCHSPIAALTRREG 237 Query: 257 STLYFYGIVLASDGKI 272 L + + DG I Sbjct: 238 DALRMTAAIYSPDGAI 253 >gi|87118000|gb|ABD20307.1| HemC [Shigella dysenteriae] gi|87118002|gb|ABD20308.1| HemC [Shigella dysenteriae] gi|87118004|gb|ABD20309.1| HemC [Shigella dysenteriae] Length = 272 Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 101/270 (37%), Positives = 150/270 (55%), Gaps = 2/270 (0%) Query: 27 LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKD 86 LM H P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD Sbjct: 1 LMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKD 58 Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDIS 146 +P + +GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ Sbjct: 59 VPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLI 118 Query: 147 VIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206 + RG + TRL+KL+N + AI+LA AG+KRL E I+ L + P+ GQGA+ IE Sbjct: 119 IRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPDISLPAVGQGAVGIE 178 Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVL 266 +++ + +EL+ +NH +T V ERA L+G C+ I +A ++ +V Sbjct: 179 CRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVG 238 Query: 267 ASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 A DG R G DA +G A+ + Sbjct: 239 APDGSQIIRGERRGAPQDAEQMGISLAEEL 268 >gi|313608617|gb|EFR84478.1| porphobilinogen deaminase [Listeria monocytogenes FSL F2-208] Length = 309 Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 111/281 (39%), Positives = 160/281 (56%), Gaps = 5/281 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PAFDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + +L +L Sbjct: 60 LFVSEVEQALSDKTIDFAVHSMKDVPSSLKEGLVIGAIPKRESPLDCFVFNQMNALDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR---L 179 SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R L Sbjct: 120 HGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL + Sbjct: 180 ENTTLKLXXXXPELCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKK 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 L+G C+ IAGFA ++F G+V +DG I E + G Sbjct: 240 LNGGCEIPIAGFATKANEAVHFKGLVGNADGSIILEAEQTG 280 >gi|240112249|ref|ZP_04726739.1| porphobilinogen deaminase [Neisseria gonorrhoeae MS11] gi|268598310|ref|ZP_06132477.1| porphobilinogen deaminase [Neisseria gonorrhoeae MS11] gi|268582441|gb|EEZ47117.1| porphobilinogen deaminase [Neisseria gonorrhoeae MS11] Length = 311 Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 106/296 (35%), Positives = 167/296 (56%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 GSC+ +A + + L G+V DG I + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKL 294 >gi|326560715|gb|EGE11083.1| porphobilinogen deaminase [Moraxella catarrhalis 46P47B1] Length = 321 Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 108/296 (36%), Positives = 163/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNRFEHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L Sbjct: 179 LHERIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IAGFA + L G V + DGK + ++ I + AA+ + Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQL 294 >gi|293402361|ref|ZP_06646498.1| hydroxymethylbilane synthase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304208|gb|EFE45460.1| hydroxymethylbilane synthase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 299 Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 97/250 (38%), Positives = 145/250 (58%), Gaps = 4/250 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 + IGTR S LALA + + R+ L + + P H+ + ++TKGD + L ++ KG+F Sbjct: 3 YIIGTRGSALALAQSEQVRTLLQNTY--PQHSFTLQIIATKGDLQQHVALDQMDAKGIFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L++G+I AVHS KDMPT+L KGL + L RED RDVFIS T + +L + Sbjct: 61 KEIEEALLAGKIHMAVHSLKDMPTQLPKGLCFTKTLLREDARDVFISRTKTAFHELGPQA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGT S RRK L++ R DISV+ RG ++TRL K+ + I+LA AG+KRL+ + + Sbjct: 121 KIGTGSKRRKVQLMKLRPDISVVGIRGNVDTRLRKMEEQQLDGIVLAAAGLKRLQVQGIS 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E P+ GQGA+ IE + ++ + + + ER FL +DG C Sbjct: 181 YEYFPYTSMIPACGQGALAIEVKEQDATLLTMINALANTHIDQEIQIERTFLQAIDGGCH 240 Query: 246 SAIAGFAYCK 255 + + A+CK Sbjct: 241 TPVG--AHCK 248 >gi|94311681|ref|YP_584891.1| porphobilinogen deaminase [Cupriavidus metallidurans CH34] gi|93355533|gb|ABF09622.1| hydroxymethylbilane synthase [Cupriavidus metallidurans CH34] Length = 334 Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 99/263 (37%), Positives = 155/263 (58%), Gaps = 2/263 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R++L + P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 24 IASRESRLAMWQAEHVRAALQQYY--PSCDVSILGMTTRGDQILDRTLSKVGGKGLFVKE 81 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E + G D AVHS KD+P +L +G ++A + RED RD +S SL+++ +V+ Sbjct: 82 LEVAMSEGRADLAVHSLKDVPMELPEGFTLTAVMEREDPRDALVSAQFASLEEMPAGTVV 141 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A L + + RG ++TRL KL+ + AI+LA AG+KRL I+ Sbjct: 142 GTSSLRREAALRSRFPHLVIKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGDRIRA 201 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 ++ E P+ GQGA+ IE + P+ E + +NH T +V+ ERA L GSC+ Sbjct: 202 LIAPESSLPAAGQGALGIEIRADRPELAEWLAPLNHLPTLLAVSAERAVSRRLGGSCQVP 261 Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270 +A A + ++L V DG Sbjct: 262 LAAHARWRDASLQLDAFVALPDG 284 >gi|56461658|ref|YP_156939.1| porphobilinogen deaminase [Idiomarina loihiensis L2TR] gi|61213262|sp|Q5QUS3|HEM3_IDILO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|56180668|gb|AAV83390.1| Porphobilinogen deaminase [Idiomarina loihiensis L2TR] Length = 313 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 104/292 (35%), Positives = 164/292 (56%), Gaps = 4/292 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LAL A + L ++H P ++ ++P+STKGD I + L +IGGKGLF Sbjct: 5 VRIATRKSKLALWQAEHIQQRLEELH--PGLSVELVPMSTKGDVILDTPLAKIGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ G D AVHS KD+P + GL++ RED RD F+S+ ++L +L + Sbjct: 63 KELEVAMLEGRADIAVHSMKDLPVEFPPGLELHTICEREDPRDAFVSNNYKNLNELPEGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GT SLRR+ + + + D RG ++TRL KL+ + AI+LA +G+ RL+ I Sbjct: 123 VVGTCSLRRRCQVKEQFPHLVIKDLRGNVQTRLRKLDEGEFDAIILAASGLIRLELGDRI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + +E P+ GQGA+ IE ++ + + L+ + ++T V ERA LDG C+ Sbjct: 183 TSFIPVEQSLPANGQGALGIECRSDDDEMKALLAPLQCQETRTRVLAERAMNRGLDGGCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASD-GKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A +G +Y G+V D GK+ + R G A +G + A+ + Sbjct: 243 VPIGAYAELEGDEVYLRGLVGEPDGGKVLRDEVR-GPASKAEELGSELAERL 293 >gi|229019689|ref|ZP_04176496.1| Porphobilinogen deaminase [Bacillus cereus AH1273] gi|229025928|ref|ZP_04182320.1| Porphobilinogen deaminase [Bacillus cereus AH1272] gi|228735374|gb|EEL85977.1| Porphobilinogen deaminase [Bacillus cereus AH1272] gi|228741596|gb|EEL91789.1| Porphobilinogen deaminase [Bacillus cereus AH1273] Length = 309 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 116/293 (39%), Positives = 167/293 (56%), Gaps = 10/293 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + +S KDLA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGESFKDLAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ ++V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWDDEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDAVTERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + IAG+A K + +V + DG + + + G D +G +AA + Sbjct: 242 QVPIAGYATLKEDDAIELTALVGSMDGSVLLKETVVGT--DPKQVGLEAADRL 292 >gi|73666979|ref|YP_302995.1| porphobilinogen deaminase [Ehrlichia canis str. Jake] gi|123773372|sp|Q3YSA8|HEM3_EHRCJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|72394120|gb|AAZ68397.1| Porphobilinogen deaminase [Ehrlichia canis str. Jake] Length = 298 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 103/257 (40%), Positives = 151/257 (58%), Gaps = 3/257 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LALA E ++L++ + P NI ++ + T GD + IGGKGLF Sbjct: 3 IRIGTRGSVLALAQTLEV-TNLLNRY-FPEINIQVVKIKTSGDINNKVPINTIGGKGLFI 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G++D AVHS KD+P GL I L R DVF+S QS+K L +++ Sbjct: 61 KEIEEALLIGKVDLAVHSVKDIPAFYCDGLIIPCVLKRSSPYDVFVSSKYQSIKSLPINA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS+RRK L R D+ VI RG I+TR+ K + + I+LA AG+ R+ K VI Sbjct: 121 TVGTSSIRRKVQLNYLRPDLQVIPVRGNIDTRILKSDIGEFDGIVLAEAGLIRINKCNVI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 KE+L+ + + GQGAIC++ ++ +KV+N ++ V ER+FL ++GSC Sbjct: 181 KEVLDSKIMLSAVGQGAICVQCRADDYNIINKIKVLNCHKSYVCVIAERSFLKTINGSCD 240 Query: 246 SAIAGFA-YCKGSTLYF 261 + +A A Y T+Y Sbjct: 241 TPLAALAQYVDSDTIYM 257 >gi|225075410|ref|ZP_03718609.1| hypothetical protein NEIFLAOT_00415 [Neisseria flavescens NRL30031/H210] gi|224953228|gb|EEG34437.1| hypothetical protein NEIFLAOT_00415 [Neisseria flavescens NRL30031/H210] Length = 325 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 104/294 (35%), Positives = 166/294 (56%), Gaps = 2/294 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 72 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 132 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 133 MPKGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 GSC+ +A + + L G+V DG + + A +GR A+ Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAK 306 >gi|254515499|ref|ZP_05127559.1| porphobilinogen deaminase [gamma proteobacterium NOR5-3] gi|219675221|gb|EED31587.1| porphobilinogen deaminase [gamma proteobacterium NOR5-3] Length = 308 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 101/282 (35%), Positives = 163/282 (57%), Gaps = 2/282 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR SPLAL A+ R +L+ +H P ++ ++ ++++GD+I + L ++GGKGLF +E Sbjct: 7 IATRESPLALWQAYFVRDTLLKMH--PGISVELLGMTSRGDQILDVPLAKVGGKGLFVKE 64 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L+ G AVHS KD+P + GL+++ RE+ D F+S+ ++L L +V+ Sbjct: 65 LETALLDGRAHIAVHSMKDVPMEFPDGLELAVICEREEPADAFVSNNYENLDALPPGAVV 124 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+ L R D++V RG + TRL KL+ + AI+LA AG+ RL+ + I+ Sbjct: 125 GTSSLRRECQLRANRPDLTVRFLRGNVNTRLRKLDEGEYDAIILACAGLIRLEMGERIRA 184 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + + + P+ GQGA+ IE ++ +EL+ ++H T + V ERA L G C+ Sbjct: 185 RIPVTESLPAGGQGAVGIEIRSDDSATRELLAPLHHGPTAERVLAERALNRRLQGGCEVP 244 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 IA +A +G L+ G+V DG G+R + +G Sbjct: 245 IAAYAVHEGDQLWLRGLVGRPDGSNTLRADARGSRDNPEALG 286 >gi|229169206|ref|ZP_04296920.1| Porphobilinogen deaminase [Bacillus cereus AH621] gi|228614272|gb|EEK71383.1| Porphobilinogen deaminase [Bacillus cereus AH621] Length = 309 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 118/293 (40%), Positives = 165/293 (56%), Gaps = 10/293 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S KDLA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPDGLMIGCTPKRVDPRDAFISKNGESFKDLAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + +V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWDGEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + IAG+A K + +V + DG + + GN D +G +AA + Sbjct: 242 QVPIAGYATLKENDAIELTALVGSMDGSVLLKEIVVGN--DPKQVGLEAADRL 292 >gi|218290821|ref|ZP_03494890.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius LAA1] gi|218239179|gb|EED06380.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius LAA1] Length = 305 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 110/285 (38%), Positives = 159/285 (55%), Gaps = 6/285 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNI--VIIPLSTKGDRITNRTLTEIGGKGL 63 R+ TR S LAL + ++D+ K H++ ++P+ T+GD I +R L+E+GGKGL Sbjct: 4 LRVATRRSALALTQT----NHVVDLLKRVIHDLKFELVPIRTRGDEIVDRALSEVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +IE L +G D AVHS KD+P +L GL I A RED RD IS T Q L DL Sbjct: 60 FVADIEDALATGRADLAVHSLKDVPFELRDGLTIGAVPRREDPRDALISRTGQGLFDLPP 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRR+A L R R D+ V RG ++TR+ +L + AI+LA +G+ RL + Sbjct: 120 GARVGTSSLRRQAALRRLRPDLRVDTLRGNVDTRIRRLEEGQFDAIVLAASGLHRLGLAE 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I E L ++ F P+ GQGA+ IE + + + I D +V ERAFL+ L+GS Sbjct: 180 KITEYLPVDRFVPAVGQGALAIECRAEDDEVLRYLGAIADPDATRAVEAERAFLSRLEGS 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 C+ I +A G L V G + ++ R G+ A+ + Sbjct: 240 CQVPIGAYAEPVGHELRLIAFVADPSGARYLQLERTGSDARALGV 284 >gi|296112247|ref|YP_003626185.1| porphobilinogen deaminase [Moraxella catarrhalis RH4] gi|295919941|gb|ADG60292.1| porphobilinogen deaminase [Moraxella catarrhalis RH4] Length = 321 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 108/296 (36%), Positives = 163/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNRFEHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L Sbjct: 179 LHERIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IAGFA + L G V + DGK + ++ I + AA+ + Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSRKLMGEIQLDEQAAEQL 294 >gi|161617053|ref|YP_001591018.1| hypothetical protein SPAB_04886 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161366417|gb|ABX70185.1| hypothetical protein SPAB_04886 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 286 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 98/263 (37%), Positives = 143/263 (54%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P Sbjct: 5 PGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVHSMKDVPVAFPD 64 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL DL S++GTSSLRR+ L R D+ + RG Sbjct: 65 GLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL KL+N AI+LA AG+KRL E I+ L + P+ GQGA+ IE +++ + Sbjct: 125 VGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTALPPDVSLPAVGQGAVGIECRLDDAR 184 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 Q L+ +NH T V ERA L+G C+ I +A ++ +V A DG + Sbjct: 185 TQALLAPLNHSQTALRVTAERAMNTRLEGGCQVPIGSYAEIINGEIWLRALVGAPDGSVM 244 Query: 274 HEVSRNGNRCDAINIGRDAAQYI 296 R G+ A +G A+ + Sbjct: 245 VRGERRGSPEQAEQMGISLAEEL 267 >gi|87118018|gb|ABD20316.1| HemC [Shigella dysenteriae] gi|87118046|gb|ABD20330.1| HemC [Escherichia coli] Length = 272 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 101/270 (37%), Positives = 150/270 (55%), Gaps = 2/270 (0%) Query: 27 LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKD 86 LM H P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD Sbjct: 1 LMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKD 58 Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDIS 146 +P + +GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ Sbjct: 59 VPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLI 118 Query: 147 VIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206 + RG + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE Sbjct: 119 IRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIE 178 Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVL 266 +++ + +EL+ +NH +T V ERA L+G C+ I +A ++ +V Sbjct: 179 CRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVG 238 Query: 267 ASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 A DG R G +A +G A+ + Sbjct: 239 APDGSQIIRGERRGAPQNAEQMGISLAEEL 268 >gi|221124344|ref|XP_002162635.1| PREDICTED: similar to hydroxymethylbilane synthase a [Hydra magnipapillata] Length = 450 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 98/256 (38%), Positives = 148/256 (57%), Gaps = 4/256 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LAL A ++ L + ++ ++ ++TKGD+I +R+L+++GGKGLF Sbjct: 151 FTIATRESRLALWQAEHVKALL----EQSGASVSLLGMTTKGDQILDRSLSKVGGKGLFV 206 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P +L G ++ + RED D ++S T S+ DL + Sbjct: 207 KELEVALEDGRADLAVHSLKDVPMELPDGFALACVMEREDPWDAWVSGTYASVMDLPKGA 266 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR ALL R D+ + RG ++TRL KL++ I+LA AG+KRL E I Sbjct: 267 VVGTSSLRRVALLRAIRPDLKIEPLRGNLDTRLRKLDDGLYDGIVLAAAGLKRLGLESRI 326 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + E P+ GQGA+ IE + ++ + H+ TW +V+ ERA + GSC Sbjct: 327 RAVFEPEQMLPAAGQGALGIEVRAGRQDVEAALQHLVHQPTWLAVSAERAVSRMMGGSCS 386 Query: 246 SAIAGFAYCKGSTLYF 261 +A +A G L+ Sbjct: 387 MPLAAYATISGDELHI 402 >gi|260220724|emb|CBA28572.1| Porphobilinogen deaminase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 312 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 98/256 (38%), Positives = 148/256 (57%), Gaps = 4/256 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LAL A ++ L + ++ ++ ++TKGD+I +R+L+++GGKGLF Sbjct: 13 FTIATRESRLALWQAEHVKALL----EQSGASVSLLGMTTKGDQILDRSLSKVGGKGLFV 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P +L G ++ + RED D ++S T S+ DL + Sbjct: 69 KELEVALEDGRADLAVHSLKDVPMELPDGFALACVMEREDPWDAWVSGTYASVMDLPKGA 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR ALL R D+ + RG ++TRL KL++ I+LA AG+KRL E I Sbjct: 129 VVGTSSLRRVALLRAIRPDLKIEPLRGNLDTRLRKLDDGLYDGIVLAAAGLKRLGLESRI 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + E P+ GQGA+ IE + ++ + H+ TW +V+ ERA + GSC Sbjct: 189 RAVFEPEQMLPAAGQGALGIEVRAGRQDVEAALQHLVHQPTWLAVSAERAVSRMMGGSCS 248 Query: 246 SAIAGFAYCKGSTLYF 261 +A +A G L+ Sbjct: 249 MPLAAYATISGDELHI 264 >gi|88705502|ref|ZP_01103212.1| Porphobilinogen deaminase [Congregibacter litoralis KT71] gi|88700015|gb|EAQ97124.1| Porphobilinogen deaminase [Congregibacter litoralis KT71] Length = 308 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 99/282 (35%), Positives = 163/282 (57%), Gaps = 2/282 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR SPLAL A+ R +L++ H P + ++ ++++GD+I + L ++GGKGLF +E Sbjct: 7 IATRESPLALWQAYFVRDTLLETH--PGITVELLGMTSRGDQILDVPLAKVGGKGLFVKE 64 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L+ G AVHS KD+P + +GL+++ RE+ D F+S+ ++L L +++ Sbjct: 65 LETALLDGRAHIAVHSMKDVPMEFPEGLELAVICEREEPADAFVSNRYENLDALPAGAIV 124 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+ L R D+ V RG + TRL KL+ + A++LA AG+ RL+ + I+ Sbjct: 125 GTSSLRRECQLRANRPDLEVRFLRGNVNTRLRKLDEGEYDAVILACAGLIRLEMGERIRA 184 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + + D P+ GQGA+ IE ++ ++L++ ++H T + V ERA L G C+ Sbjct: 185 RIPVTDSLPAGGQGAVGIEIRSDDSATRKLLEPLHHGPTAERVLAERALNRRLQGGCEVP 244 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 IA +A +G L+ G+V DG G+R + +G Sbjct: 245 IASYAVHEGDELWLRGLVGRPDGSHTLRADARGSREEPEALG 286 >gi|171319139|ref|ZP_02908260.1| porphobilinogen deaminase [Burkholderia ambifaria MEX-5] gi|171095659|gb|EDT40618.1| porphobilinogen deaminase [Burkholderia ambifaria MEX-5] Length = 328 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 109/304 (35%), Positives = 169/304 (55%), Gaps = 5/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 14 LTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFV 71 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L + Sbjct: 72 KELENALADGRADLAVHSLKDVPMALPDGFALTAIMEREDPRDAFVSNDYASLDALPAGA 131 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E I Sbjct: 132 VVGTSSLRREAMLRARYPHLDVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEARI 191 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++++ED PP+ GQGA+ IE + + ++ T +V ER L GSC+ Sbjct: 192 RTLIDVEDSPPAAGQGALGIEIAAHRTDVAAWLAPLHDPQTALAVEAERMVSRALGGSCE 251 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNK 302 +A A + LY G V +DG+ G DA+ +GR + + + Sbjct: 252 VPLAAHAVWRAGELYLTGRVSTTDGQRVLTAEECGAVMTVADALALGRAVSDELEAQGAR 311 Query: 303 NVFN 306 ++ N Sbjct: 312 DIVN 315 >gi|251798413|ref|YP_003013144.1| porphobilinogen deaminase [Paenibacillus sp. JDR-2] gi|247546039|gb|ACT03058.1| porphobilinogen deaminase [Paenibacillus sp. JDR-2] Length = 323 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 112/300 (37%), Positives = 160/300 (53%), Gaps = 14/300 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDV---HKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +GTR S LAL + L + H H I + TKGDRI + TL+++GGKGLF Sbjct: 13 VGTRQSALALTQTGQVIDELKRISEKHGFDYH-FEIRKIVTKGDRILDVTLSKVGGKGLF 71 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE+ L+ GEID AVHS KDMP +L +GL A R D RD I SL DL Sbjct: 72 VKEIEQALLDGEIDMAVHSMKDMPYELPEGLMNGATPRRVDPRDCLIMKQGSSLDDLPAG 131 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR + L R D+ + RG I++R+ KL A++LA AG+ R+ + Sbjct: 132 ARVGTSSLRRSSQLKNIRPDLKLDSIRGNIDSRIRKLETEGFDAVVLAAAGLSRMGWQDR 191 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + ++ P+ GQGA+ IE + +EL+ ++N +T SV ER+FL L+G C Sbjct: 192 ISAFIPVDLSIPAVGQGALGIECRTADAGVRELLNLLNDTETSLSVRAERSFLGALNGGC 251 Query: 245 KSAIAGFAYC--------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + I FA + L G+V + DG++ + R G D +GRD A + Sbjct: 252 QVPIGAFAVVHKKSEDSFDNAELELTGMVGSPDGEVMLKEIRKG--TDPEQLGRDVAAAL 309 >gi|294085042|ref|YP_003551802.1| porphobilinogen deaminase [Candidatus Puniceispirillum marinum IMCC1322] gi|292664617|gb|ADE39718.1| porphobilinogen deaminase [Candidatus Puniceispirillum marinum IMCC1322] Length = 347 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 113/298 (37%), Positives = 161/298 (54%), Gaps = 23/298 (7%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P + +R S LA+A A R +L P I P +TKGD I +R L E+GGKG+F Sbjct: 42 PLVLASRASTLAMAQAELVRVAL------KPVASRIEPFTTKGDLILDRPLVEVGGKGVF 95 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E+ L++GE D AVHS KDM + G I A LPRED RD + A L L Sbjct: 96 IKELERSLLAGESDAAVHSMKDMESDFAAGTMIGAVLPREDRRDALVGSYAD-LDALPDG 154 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +++GTSS+RR+ALLL R D+ + RG I R+ KLN AI+LA AG+KRLK + Sbjct: 155 AIVGTSSVRRRALLLHHRPDLRIKLLRGNINKRIAKLNQGDYDAIILAVAGLKRLKLS-L 213 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS------------VNC 232 L+ + P + QGA+ ++ + +P + K I + +D+ V Sbjct: 214 DYTPLDEKLMPTAAAQGALAVQ--LCDPSLAQGEKAIRQQAVFDAISPLACVNSTIEVTA 271 Query: 233 ERAFLAELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 ERA LA LDGSC + IA A + TL G+VL+SDG + ++ +A+ +G Sbjct: 272 ERAMLAHLDGSCHTPIAASARFVDDKTLRLDGMVLSSDGSAAFRRTMTASKDEAVALG 329 >gi|82751259|ref|YP_417000.1| porphobilinogen deaminase [Staphylococcus aureus RF122] gi|123727415|sp|Q2YTB9|HEM3_STAAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|82656790|emb|CAI81219.1| Porphobilinogen deaminase [Staphylococcus aureus RF122] Length = 308 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 106/292 (36%), Positives = 166/292 (56%), Gaps = 6/292 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L S+I Sbjct: 64 IQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPEGSII 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + ++ Sbjct: 124 GTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSDDIVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+I+ P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DGSC+ Sbjct: 184 SYLDIDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDGSCQV 243 Query: 247 AIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 IAG+A + F G+++ DGK E + NG D + +G+ + ++ Sbjct: 244 PIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKKVSNKLK 293 >gi|255037032|ref|YP_003087653.1| porphobilinogen deaminase [Dyadobacter fermentans DSM 18053] gi|254949788|gb|ACT94488.1| porphobilinogen deaminase [Dyadobacter fermentans DSM 18053] Length = 307 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 110/268 (41%), Positives = 157/268 (58%), Gaps = 8/268 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LAL A+ L IVII TKGD+I +R+L++IG KG+FT Sbjct: 3 IKIGTRGSKLALWQAYYVEELLQ--RGGVETEIVII--ETKGDKILDRSLSKIGSKGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH-TAQSLKDLALH 124 EE+E +L SG+ID AVHSAKD+ + L +I A+ RE DV +SH T SLK Sbjct: 59 EELEDQLRSGDIDIAVHSAKDLQSHLDDAFEIIAFTEREQANDVLVSHDTTLSLKSGESF 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V GTSS RR A+L + I +D RG ++TRL KL + A+LLA+AG+ R++ + Sbjct: 119 TV-GTSSTRRVAVLKHYYPHIKTVDMRGNLQTRLRKLEEGQCDALLLAFAGVHRMEYDDK 177 Query: 185 IKEILNIEDFPPSPGQGAICIETHV--NNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E L +++F P+ GQG++ IET V + K +L +++N+E T + ERAFL L G Sbjct: 178 IAEHLLLDEFTPAVGQGSVAIETAVALDPAKKSKLRELLNNEHTETCLLAERAFLKRLQG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270 C + G A + G +++ DG Sbjct: 238 GCSIPVFGMATLHEDEIRMTGGIISLDG 265 >gi|229013679|ref|ZP_04170808.1| Porphobilinogen deaminase [Bacillus mycoides DSM 2048] gi|229135309|ref|ZP_04264103.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST196] gi|228648132|gb|EEL04173.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST196] gi|228747601|gb|EEL97475.1| Porphobilinogen deaminase [Bacillus mycoides DSM 2048] Length = 309 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 118/293 (40%), Positives = 165/293 (56%), Gaps = 10/293 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S KDLA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPDGLTIGCTPKRVDPRDAFISKNGESFKDLAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + +V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWDGEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + IAG+A K + +V + DG + + GN D +G +AA + Sbjct: 242 QVPIAGYATLKENDAIELTALVGSMDGSVLLKEIVVGN--DPKQVGLEAADRL 292 >gi|326571836|gb|EGE21842.1| porphobilinogen deaminase [Moraxella catarrhalis BC7] Length = 321 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 107/296 (36%), Positives = 163/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNRFEHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + A++LA +G++RL Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAVILATSGLERLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L Sbjct: 179 LHERIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ IAGFA + L G V + DGK + ++ I + AA+ + Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQL 294 >gi|317486609|ref|ZP_07945428.1| porphobilinogen deaminase [Bilophila wadsworthia 3_1_6] gi|316922143|gb|EFV43410.1| porphobilinogen deaminase [Bilophila wadsworthia 3_1_6] Length = 308 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 118/291 (40%), Positives = 159/291 (54%), Gaps = 7/291 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK I TR S LAL A + SL VH P + + + TKGD I + L ++GG Sbjct: 1 MEK--LVIATRGSRLALWQANHVKDSLEAVH--PGLAVELNIIKTKGDIILDVPLAKVGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L+SG D AVHS KD+P +L +GL + RED D+F+S SL++ Sbjct: 57 KGLFVKEIEEALLSGAADIAVHSMKDVPMELPEGLILGIVPEREDPTDLFLSVDYDSLEN 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A +L R D+ V+ RG ++TRL KL + AI++A AG+KRL Sbjct: 117 LPAGAVVGTSSLRRQAQVLAQRPDLEVVSLRGNVDTRLRKLTEGQFAAIIMATAGMKRLG 176 Query: 181 KEKVIKEI-LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 V KE L F P+ GQGA+ IE + E++ + H T V ER LA Sbjct: 177 L-SVPKECPLAPPAFIPAVGQGALGIEFREDRKDLAEMLSFMEHRPTRICVEAERGLLAG 235 Query: 240 LDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 LDG C+ IAG A T G+V DG + G +A +G Sbjct: 236 LDGGCQVPIAGHAEMLDDGTFELEGLVGEVDGSVIIRRKVTGRADEARAVG 286 >gi|220904556|ref|YP_002479868.1| porphobilinogen deaminase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868855|gb|ACL49190.1| porphobilinogen deaminase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 310 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 115/305 (37%), Positives = 159/305 (52%), Gaps = 3/305 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + I TR S LAL A +S L + P I + + TKGD I + L ++GGKG Sbjct: 2 RNTLTIATRGSRLALWQAEHVKSCLQAIR--PGLEIRLNVIKTKGDIILDVPLAKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L++GE D AVHS KD+P +L +GL + PRED D +SH S+ L Sbjct: 60 LFVKEIEEALLNGEADLAVHSMKDVPMELPEGLILGCVPPREDPTDCLLSHKYDSVAALP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ +GTSSLRR++ LL R D+ + RG ++TRL KL AI+LA AG+KRL Sbjct: 120 PNACVGTSSLRRQSQLLAQRPDLRIESLRGNVDTRLRKLQEGMYDAIILASAGLKRLGLS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 L+ F P+ GQGA+ IE N+ + L+ + T V ER FLA L+G Sbjct: 180 APHMHALDPHTFLPAVGQGALGIECRENDYELFTLLAEMEDSATRVCVEAERGFLAGLEG 239 Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG A TL G+V DG S++G+ A G + A I Sbjct: 240 GCQVPIAGHARLLDDDTLRLEGLVAEVDGSRILRCSKDGHTSQARRWGLELAGEILEQGG 299 Query: 302 KNVFN 306 K + Sbjct: 300 KGILE 304 >gi|187478790|ref|YP_786814.1| porphobilinogen deaminase [Bordetella avium 197N] gi|115423376|emb|CAJ49910.1| porphobilinogen deaminase [Bordetella avium 197N] Length = 314 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 104/282 (36%), Positives = 156/282 (55%), Gaps = 2/282 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A R L D++ P + ++ L+T+GD+I +R+L+++GGKGLF +E Sbjct: 9 IATRASRLALWQAEHVRDRLRDLY--PACAVELLTLTTRGDQILDRSLSKVGGKGLFVKE 66 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L+ G D AVHS KD+P + +S L R D RD F+S SL L + +V+ Sbjct: 67 LEHALLDGRADLAVHSLKDVPVDIQAPFALSTVLERADPRDAFVSARYASLDALPVGAVV 126 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A + R D+ V RG ++TRL KL+ + A++LA AG++R+ I+ Sbjct: 127 GTSSLRREAQIRAARPDLVVRPLRGNLDTRLGKLDRGEYDAVVLAAAGLERIGYGDRIRA 186 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 L P+ GQGA+ IE + + + ++ T V+ ERA L GSC+ Sbjct: 187 RLAPAQSLPAAGQGALGIEIRDDRDDMRAWLAPLSDASTTACVSAERAVSRALGGSCQVP 246 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 I +A G TL +V + DG+ SR G +A ++G Sbjct: 247 IGAYAELHGQTLRIDALVASPDGRRILRASRLGPVAEADSLG 288 >gi|258545718|ref|ZP_05705952.1| hydroxymethylbilane synthase [Cardiobacterium hominis ATCC 15826] gi|258519035|gb|EEV87894.1| hydroxymethylbilane synthase [Cardiobacterium hominis ATCC 15826] Length = 310 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 109/285 (38%), Positives = 161/285 (56%), Gaps = 5/285 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-IIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR S LAL A E ++ + H PH V ++P++T+GD+I + L IGGKGLF Sbjct: 8 IRIATRESKLALWQA-EHVAARLRAHY--PHLAVRLVPMTTRGDQILDAPLARIGGKGLF 64 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E+ + GE D AVHS KD+ L +G +I+A LPRE+ D F+S+ SL +L Sbjct: 65 IKELEQAMARGEADIAVHSMKDVGVHLPEGFRIAAILPRENPHDAFVSNHYASLAELPPG 124 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT SLRR+ L R R D+ ++D RG ++TRL+KL+ AI+LA AG+ RL + Sbjct: 125 ARVGTCSLRRRMQLARLRPDLKLLDLRGNVQTRLDKLDRGDFDAIVLACAGLIRLGLQAR 184 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ L E P+ GQGAI IE H + L+ ++ DT V+ ER L+GSC Sbjct: 185 IRAELPPEQSLPAIGQGAIGIECHETS-AVYPLLAALDDADTALCVHTERIINTHLEGSC 243 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 + +A A G ++ + DG + + + R DA +G Sbjct: 244 QVPLAAHAALHGERIHLAARIGMPDGSRYLSAADDAPRRDAEALG 288 >gi|163856376|ref|YP_001630674.1| porphobilinogen deaminase [Bordetella petrii DSM 12804] gi|229836105|sp|A9IKF3|HEM3_BORPD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|163260104|emb|CAP42405.1| hemC [Bordetella petrii] Length = 313 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 102/263 (38%), Positives = 153/263 (58%), Gaps = 2/263 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A R L ++ P + ++ L+T+GD+I +RTL+++GGKGLF +E Sbjct: 9 IATRASRLALWQAEHVRDRLRALY--PACAVELLTLTTRGDQILDRTLSKVGGKGLFVKE 66 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L+ G D AVHS KD+P L ++ A L R D RD F+S+ +L DL +V+ Sbjct: 67 LETALLDGRADLAVHSLKDVPVDLQAPFELCAILERADPRDAFVSNQYTTLADLPAGAVV 126 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR++ + + +SV RG ++TRL+KL+ AI+LA AG++RL + I+ Sbjct: 127 GTSSLRRESQIRQRYPHLSVKPLRGNLDTRLSKLDRGDYAAIVLAAAGLQRLGMGERIRS 186 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L ED P+ GQGA+ IE + +E + + T V ERA L GSC+ Sbjct: 187 LLEPEDSLPAAGQGALGIEIRNDRNDLREWLAPLACSRTTACVVAERAVSRALGGSCQVP 246 Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270 +A +A G++L +V + DG Sbjct: 247 LAAYAELNGNSLALRALVASPDG 269 >gi|323173419|gb|EFZ59048.1| porphobilinogen deaminase [Escherichia coli LT-68] Length = 286 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 97/259 (37%), Positives = 146/259 (56%) Query: 38 IVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQI 97 + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +GL + Sbjct: 9 VELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGL 68 Query: 98 SAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETR 157 RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG + TR Sbjct: 69 VTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTR 128 Query: 158 LNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217 L+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + +EL Sbjct: 129 LSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTRTREL 188 Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277 + +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 189 LAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGE 248 Query: 278 RNGNRCDAINIGRDAAQYI 296 R G +A +G A+ + Sbjct: 249 RRGAPQNAEQMGISLAEEL 267 >gi|323489960|ref|ZP_08095181.1| porphobilinogen deaminase [Planococcus donghaensis MPA1U2] gi|323396256|gb|EGA89081.1| porphobilinogen deaminase [Planococcus donghaensis MPA1U2] Length = 309 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 117/291 (40%), Positives = 172/291 (59%), Gaps = 7/291 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + L P I + TKGDRI + L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQTNQFIDKLKAAGA--PFEFEIKEIVTKGDRIVDVMLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ L EID AVHS KDMP+ L +GL I RED RD +I++ L DL + +V+ Sbjct: 64 IEQALFDREIDFAVHSMKDMPSVLPEGLAIGCIPEREDPRDAYIANDHVKLLDLPVGAVV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR + LL R D+ + RG I+TRL KL + AI+LA AG+KR+ K+ ++ Sbjct: 124 GTSSLRRSSQLLLLRPDLDIQWIRGNIDTRLAKLKSGDFDAIILAAAGLKRMGWKDDLVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E L +++ P+ GQG++ IE + + + +NHEDT +VN ER FL ++DGSC+ Sbjct: 184 EFLEVDECLPAIGQGSLGIECREEDTELLSELAKLNHEDTALAVNAERKFLKDMDGSCQV 243 Query: 247 AIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNGNRCDAINIGRDAAQYI 296 IAG+A K + F G++ + + ++F E++ + D I GR A+ I Sbjct: 244 PIAGYATVKDGEVTFTGLISSPEADQVFKEMAIS---HDPIEAGRIVAEKI 291 >gi|295695321|ref|YP_003588559.1| porphobilinogen deaminase [Bacillus tusciae DSM 2912] gi|295410923|gb|ADG05415.1| porphobilinogen deaminase [Bacillus tusciae DSM 2912] Length = 310 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 105/289 (36%), Positives = 153/289 (52%), Gaps = 6/289 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK-IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIG+R S LA+ TR + K +P + ++P++T+GDR+ + L+ +GGKGLF Sbjct: 4 LRIGSRKSALAMTQ---TRWLIEQWQKRVPGLSAEVVPMTTRGDRVLDVPLSRVGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 EEIE+ L+ ID AVHS KD+P +L G + A RED RD I+ + DL Sbjct: 61 VEEIERALLEKRIDAAVHSLKDLPAQLAPGTVVGAVPRREDPRDAVITRDGRPFDDLPSG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR A L R+R D++ I RG ++TRL KL + A++LA AGI RL Sbjct: 121 ARVGTSSLRRVAQLRRYRPDLAFIPLRGNVDTRLRKLAAGEVDAVVLAAAGILRLGLGDR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ E P+ GQGA+ ++ + + ++ + +V ER LA L+G C Sbjct: 181 ITEYLSPEICLPAVGQGALAVQCREADEDTRRSLESVEDAAARKTVEAERTCLAALEGGC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 + I A + + +V DG V G D +GR AA Sbjct: 241 QVPIGALAEIRDGHIRLAAMVARPDGSELLRVVVQGE--DPAEVGRRAA 287 >gi|254519530|ref|ZP_05131586.1| porphobilinogen deaminase [Clostridium sp. 7_2_43FAA] gi|226913279|gb|EEH98480.1| porphobilinogen deaminase [Clostridium sp. 7_2_43FAA] Length = 290 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 105/289 (36%), Positives = 167/289 (57%), Gaps = 6/289 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LA A + + + + I ++++ T+GDR + TL +IGGKGLF +E Sbjct: 5 IATRKSKLAQVQADKVIELIKEKNNINAKKLLVV---TEGDRRLDVTLDKIGGKGLFVKE 61 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE L++ E AVHS KD+P +L + ++ A R+DIRDVF+S +DL ++I Sbjct: 62 IEYALLNKEAHAAVHSMKDVPFELSEDFELVAIPERDDIRDVFVSSNGIHFQDLKEGAII 121 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSS+RR A+L + R D++++ RG ++TRL+K+ I+LA AGIKRL E +I + Sbjct: 122 GTSSIRRAAMLKKLRGDLNIVPIRGNVQTRLDKMKKENMDGIILAAAGIKRLGLEDIITD 181 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + ++F P+ GQGA+ IE + N + +K +++++ +V ER+F+ +L+G C S Sbjct: 182 YFDPKEFLPAIGQGALGIEA-LKNGEYNNYLKKLDNKEVRIAVEAERSFMKKLNGGCHSV 240 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I ++ K LY G GKI + G + + I +G AQ I Sbjct: 241 IGVYSEIKNDDLYMIG-TFDVGGKIIKK-DILGKKSENIELGFKLAQKI 287 >gi|229062158|ref|ZP_04199482.1| Porphobilinogen deaminase [Bacillus cereus AH603] gi|228717141|gb|EEL68817.1| Porphobilinogen deaminase [Bacillus cereus AH603] Length = 309 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 118/293 (40%), Positives = 165/293 (56%), Gaps = 10/293 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDITLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S KDLA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPDGLTIGCTPKRVDPRDAFISKNGESFKDLAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + +V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWDGEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + IAG+A K + +V + DG + + GN D +G +AA + Sbjct: 242 QVPIAGYATLKENDEIELTALVGSMDGSVLLKEIVVGN--DPKQVGLEAADRL 292 >gi|229543656|ref|ZP_04432716.1| porphobilinogen deaminase [Bacillus coagulans 36D1] gi|229328076|gb|EEN93751.1| porphobilinogen deaminase [Bacillus coagulans 36D1] Length = 310 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 101/270 (37%), Positives = 156/270 (57%), Gaps = 5/270 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP-PHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +G+R S LAL +T+ + + ++ P I ++TKGD++ + TL+++GGKGLF + Sbjct: 6 VGSRRSKLALT---QTKWVVAKLEQLGLPFRFEIREITTKGDKVLDVTLSKVGGKGLFVK 62 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE +++ EID AVHS KD+P L GL I RED+RD IS L +V Sbjct: 63 EIEDAMLNHEIDMAVHSMKDVPAVLPDGLVIGCIPEREDVRDALISKNGTPFSSLKEGAV 122 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVI 185 +GTSSLRR A LL RSDI + RG I+TRL KL N AI+LA AG+KR+ + Sbjct: 123 VGTSSLRRGAQLLAVRSDIRIKSVRGNIDTRLEKLKNGDYDAIVLAAAGLKRMGWSADTV 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E + + P+ GQGA+ +E ++ + + ++ ++ +T ++V ER FL +++G C+ Sbjct: 183 TEFFDPDICLPAIGQGALAVECRADDGELLDALRKLDSAETAETVKAERVFLDKMEGGCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275 IAG A + +V + DGK ++ Sbjct: 243 VPIAGLAKKTAEGISLTALVASPDGKTVYK 272 >gi|319639194|ref|ZP_07993945.1| porphobilinogen deaminase [Neisseria mucosa C102] gi|317399378|gb|EFV80048.1| porphobilinogen deaminase [Neisseria mucosa C102] Length = 325 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 104/294 (35%), Positives = 166/294 (56%), Gaps = 2/294 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDRTLSKVGG 72 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 132 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 133 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 GSC+ +A + + L G+V DG + + A +GR A+ Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAK 306 >gi|251773212|gb|EES53764.1| porphobilinogen deaminase [Leptospirillum ferrodiazotrophum] Length = 321 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 160/296 (54%), Gaps = 4/296 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RIGTR S LAL A + + + +I T GD I + L+++GGK Sbjct: 6 DSSPIRIGTRGSELALWQARHVAAMIRHTAGLESELTII---KTTGDMILSVPLSQVGGK 62 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +EIE+ LI+G ID AVHS KD+P L +GL+I A L RED RD F+S+ S L Sbjct: 63 GLFVKEIEEALIAGTIDLAVHSMKDVPAFLPEGLEIGAILSREDPRDAFVSNAYSSFSSL 122 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSSLRR A L + R D+ RG + TRL KL+ N+ AI+LA AG+ RL Sbjct: 123 PPGARIGTSSLRRMAQLKKRRPDLRFESLRGNVGTRLRKLDENQIDAIILAAAGLIRLGF 182 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I+E L +E P+ GQGA+ +E + + + ++ ++ +T V ER L+ LD Sbjct: 183 SDRIREYLPVELSLPAVGQGALGLECRTGDHRIRTILARMHDPETTACVLAERGVLSALD 242 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 G C+ IA A + +L +G E +G +A +G +AAQ + Sbjct: 243 GGCQLPIAAHARTISPEQIELIARILDVEGTTLLEEHTSGPAKEAHRLGVEAAQKL 298 >gi|241667490|ref|ZP_04755068.1| porphobilinogen deaminase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876036|ref|ZP_05248746.1| porphobilinogen deaminase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842057|gb|EET20471.1| porphobilinogen deaminase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 300 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 99/268 (36%), Positives = 156/268 (58%), Gaps = 3/268 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LAL + + I I + T+GD I ++ L +IGGK L Sbjct: 2 KQIVIASRESKLALWQTNYVKDRIQQELNIRCQ---INTMKTQGDIILDKPLNKIGGKAL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E +++ + D AVHS KD+P +L +G +++++PRED RD F+S+ S+ DL Sbjct: 59 FMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLASFMPREDPRDAFVSNKYSSIDDLPR 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ + Sbjct: 119 GAIVGTSSLRRKAQLLHYRGDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELNE 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +E P+ GQG + IE + + + ++ +N D++ ERAF EL G Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALDKSSEILQKLQKLNCSDSFCVATAERAFNQELKGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271 C AI +A + + +V +SDGK Sbjct: 239 CHVAIGAYAELHDNQITLTAMVASSDGK 266 >gi|323177814|gb|EFZ63398.1| porphobilinogen deaminase [Escherichia coli 1180] Length = 279 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 97/259 (37%), Positives = 146/259 (56%) Query: 38 IVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQI 97 + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +GL + Sbjct: 2 VELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGL 61 Query: 98 SAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETR 157 RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG + TR Sbjct: 62 VTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTR 121 Query: 158 LNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217 L+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + +EL Sbjct: 122 LSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTRTREL 181 Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277 + +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 182 LAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGE 241 Query: 278 RNGNRCDAINIGRDAAQYI 296 R G +A +G A+ + Sbjct: 242 RRGAPQNAEQMGISLAEEL 260 >gi|24211755|sp|Q8YVU6|HEM3_ANASP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 323 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 112/309 (36%), Positives = 169/309 (54%), Gaps = 9/309 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++ RIG+R S LAL + R L + P N + +ST+GD+I + L +IG KG Sbjct: 9 RRTIRIGSRKSQLALVQTYWVREQLQN--SFPDINFEVHTMSTQGDKILDVALAKIGDKG 66 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD-- 120 LFT+E+E +I+ EID AVHS KD+PT L +GL ++A RE+ D + H ++ KD Sbjct: 67 LFTKELEVGMINEEIDFAVHSLKDLPTNLPEGLALAAITERENPADALVVH--ENFKDKQ 124 Query: 121 ---LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L +VIGTSSLRR A L ++ D RG + TRL KL+ + ++LA AG++ Sbjct: 125 IDTLPAGAVIGTSSLRRLAQLRNQFPHLTFKDVRGNLNTRLAKLDAGEYDGLILAAAGLQ 184 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL + +IL E + GQGA+ IE ++ + ++K I H +T D ER+FL Sbjct: 185 RLGMGDRVHQILPKEISLHAVGQGALGIECRADDAELITVLKAIEHPETRDRCLAERSFL 244 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L+G C+ I G+ L G+V + DG+ + + +GN DA IG A+ +R Sbjct: 245 RSLEGGCQVPIGVNTEINGNELILTGVVASVDGQNLVKDTVSGNASDAEAIGIRLAELLR 304 Query: 298 FISNKNVFN 306 + + N Sbjct: 305 EQGAQEILN 313 >gi|269213761|ref|ZP_05982800.2| hydroxymethylbilane synthase [Neisseria cinerea ATCC 14685] gi|269145303|gb|EEZ71721.1| hydroxymethylbilane synthase [Neisseria cinerea ATCC 14685] Length = 325 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 104/294 (35%), Positives = 166/294 (56%), Gaps = 2/294 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCKVEILGMTTRGDQILDRTLSKVGG 72 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 132 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 133 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 GSC+ +A + + L G+V DG + + A +GR A+ Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAK 306 >gi|284799715|ref|ZP_05984671.2| hydroxymethylbilane synthase [Neisseria subflava NJ9703] gi|284797316|gb|EFC52663.1| hydroxymethylbilane synthase [Neisseria subflava NJ9703] Length = 323 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 104/294 (35%), Positives = 166/294 (56%), Gaps = 2/294 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDRTLSKVGG 72 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFTLAAISERANPFDAFVSNQYARLEE 132 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 133 MPKGAVVGTSSLRREAQLRVRYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 GSC+ +A + + L G+V DG + + A +GR A+ Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAK 306 >gi|304407492|ref|ZP_07389144.1| porphobilinogen deaminase [Paenibacillus curdlanolyticus YK9] gi|304343443|gb|EFM09285.1| porphobilinogen deaminase [Paenibacillus curdlanolyticus YK9] Length = 325 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 110/300 (36%), Positives = 162/300 (54%), Gaps = 13/300 (4%) Query: 6 FRIGTRCSPLAL---AHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 R+GTR S LAL E L + H +P + + + TKGDRI + TL+++GGKG Sbjct: 12 IRVGTRQSALALTQTGQVIEQLKELSERHGLP-YTFETVKIVTKGDRILDVTLSKVGGKG 70 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L+ GEID AVHS KDMP +L +GL + R D RDV I+ L Sbjct: 71 LFVKEIEQALLDGEIDLAVHSMKDMPYELPEGLMNGSVPKRVDPRDVLITADGGGFDALP 130 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR + L R DI ++ RG I++RL KL + AI+LA AG+ R+ E Sbjct: 131 NGAKVGTSSLRRASQLKNRRPDIEIVSIRGNIDSRLKKLETEQFDAIVLAAAGMTRMGWE 190 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I L ++ P+ GQGA+ IE + + L+ ++N + +V ER+FL L+G Sbjct: 191 NRISSPLPVDICVPAVGQGALGIECREADSDVRYLLSLLNDPISELAVRAERSFLGALNG 250 Query: 243 SCKSAIA---------GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 C+ I G + +G+ + GIV + DG+I + G +A+ + AA Sbjct: 251 GCQIPIGAHATVAIPEGASNLEGALIELVGIVGSPDGEILLKEIGKGTDPEALGLSVAAA 310 >gi|302388903|ref|YP_003824724.1| hydroxymethylbilane synthase [Thermosediminibacter oceani DSM 16646] gi|302199531|gb|ADL07101.1| hydroxymethylbilane synthase [Thermosediminibacter oceani DSM 16646] Length = 299 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 103/285 (36%), Positives = 161/285 (56%), Gaps = 14/285 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+G+R S LAL L D + P ++ + T+GD++ + L++ GGKG+F Sbjct: 8 VRVGSRESRLALVQTEIVIRLLKD--RRPELEFEVVKIKTQGDKLLDVNLSDAGGKGVFV 65 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L++G ID AVHS KD+P +L +GL I+A RED RDV IS + L +L + Sbjct: 66 KEIEEALLAGSIDLAVHSMKDVPYELPEGLCIAAVTEREDPRDVLISRDKRRLLNLRPGA 125 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSSLRR L R D+ ++ RG + TR+ K+++ + ++LA AGIKRL E++I Sbjct: 126 RIGTSSLRRSVQLKALRPDLDIVPVRGNVPTRIRKMDDLELDGLVLAAAGIKRLGLEELI 185 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E E P+ GQGA+ +E ++ EL +++H+ T +V ER+F+ L GSC+ Sbjct: 186 AEYFPPEVIVPAVGQGALAVEARKDD-DILELAGLVSHKATEVAVRAERSFMRALGGSCR 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 + FA +G+ + G+ V +NG+ C G+ Sbjct: 245 VPLGAFARVEGTVVTLVGM-----------VEKNGSVCKGTMSGK 278 >gi|328474912|gb|EGF45712.1| porphobilinogen deaminase [Listeria monocytogenes 220] Length = 288 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 104/245 (42%), Positives = 145/245 (59%), Gaps = 7/245 (2%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + I + TKGDRI + TL+++GGKGLF E+E+ L ID AVHS KD+P+ L + Sbjct: 10 PEFDFEIKEIVTKGDRILDVTLSKVGGKGLFVSEVEQALSDEVIDFAVHSMKDVPSSLKE 69 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL I A RE D F+ + SL +L SVIGTSSLRR A LL+ R D + RG Sbjct: 70 GLIIGAIPKRESPLDCFVFNRVNSLDELPQGSVIGTSSLRRAAQLLKHRPDFVIKPIRGN 129 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFP-----PSPGQGAICIETH 208 I+TRL KL+ AI+LA AG+ R+ + L +ED P P+ GQGA+ IE Sbjct: 130 IDTRLQKLHAENFDAIILAKAGLARMG--WLENTTLKLEDIPPELCLPAVGQGALAIECR 187 Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS 268 ++ + ++++ I+HE+T V ER FL +L+G C+ IAGFA ++F G+V + Sbjct: 188 ESDQQIRDMLTSIHHEETGICVEAERVFLKKLNGGCEIPIAGFATRANEVVHFKGLVGNA 247 Query: 269 DGKIF 273 DG I Sbjct: 248 DGSII 252 >gi|85060344|ref|YP_456046.1| porphobilinogen deaminase [Sodalis glossinidius str. 'morsitans'] gi|84780864|dbj|BAE75641.1| porphobilinogen deaminase [Sodalis glossinidius str. 'morsitans'] Length = 320 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 102/271 (37%), Positives = 148/271 (54%), Gaps = 4/271 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIG 59 M+ RI TR SPLAL A R L+ H PH + ++PL T+GD + L ++G Sbjct: 8 MQDNLLRITTRQSPLALWQAGYVRDELLRHH---PHLQVELVPLVTRGDITLDTPLAKVG 64 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E L+ D AVHS KD+ GL + R+D RD F+S +L Sbjct: 65 GKGLFIKELELALLEHRADIAVHSMKDVTVSFPAGLGLCVLCERDDPRDAFVSPRYANLD 124 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +++GTSSLRR+ L R D+ V D RG + TRL KL+ A++LA AG+KRL Sbjct: 125 VLPPGAIVGTSSLRRQCQLRERRPDVIVHDLRGNVGTRLAKLDRGNFDAVILAVAGLKRL 184 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E I+ ++ D P+ GQGA+ IE +++ + L+ ++H +T V ERA A Sbjct: 185 GLEDRIRHAIDPADSLPAVGQGAVGIECRLDDARTLALLAPLHHRETSLRVGAERAMNAR 244 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 L G C+ I +A G ++ +V + DG Sbjct: 245 LQGGCQVPIGSYAVLDGEEIWLRALVGSPDG 275 >gi|284039864|ref|YP_003389794.1| porphobilinogen deaminase [Spirosoma linguale DSM 74] gi|283819157|gb|ADB40995.1| porphobilinogen deaminase [Spirosoma linguale DSM 74] Length = 309 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 113/301 (37%), Positives = 173/301 (57%), Gaps = 20/301 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+ A E +L++ + ++I TKGD + +R+L +IG KG+FT Sbjct: 3 IRIGTRSSRLAVWQA-EHIQALLEKGGLTSELVLI---ETKGDLVLDRSLAKIGSKGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E +L SG ID AVHSAKD+P+ L L I A+ RE DV +S K L+L Sbjct: 59 QELEDQLRSGTIDIAVHSAKDLPSNLPADLHIIAFTEREPANDVLVSRN----KSLSLQG 114 Query: 126 ----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 IGTSS RR A+L + ++ +D RG ++TR+ KL+ A+LLAYAG+ R+ Sbjct: 115 GESFRIGTSSTRRVAMLKHYCPQLATVDMRGNLQTRIRKLDEGHCDALLLAYAGVHRMGY 174 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPK---AQELVKVINHEDTWDSVNCERAFLA 238 + +I E L +++F P+ GQG+I IE + K A+ + ++INHE T + ERAFLA Sbjct: 175 DDLIVERLPLDEFTPAVGQGSIAIEVATDALKSDIAEAITRLINHEPTAACLRAERAFLA 234 Query: 239 ELDGSCKSAIAGFA---YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 L+G C +I FA + +T+ G +++ DG + +G+ ++ +G A+ Sbjct: 235 RLEGGC--SIPSFALAQWTDDTTVSLTGGLVSLDGSQLLRETFSGSAQESHLLGHSLAEA 292 Query: 296 I 296 I Sbjct: 293 I 293 >gi|297583719|ref|YP_003699499.1| porphobilinogen deaminase [Bacillus selenitireducens MLS10] gi|297142176|gb|ADH98933.1| porphobilinogen deaminase [Bacillus selenitireducens MLS10] Length = 312 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 110/306 (35%), Positives = 180/306 (58%), Gaps = 8/306 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIP-PHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LA+ +TR + ++ K+ P I ++T+GD I + TL+++GGKG Sbjct: 3 RTITLGSRRSNLAMT---QTRWVISELEKLGLPFQFEIKEITTRGDEILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ + +GEID AVHS KD+P+ +GL +++ R D RD IS++ ++L +L Sbjct: 60 LFVKEIEQAMHNGEIDMAVHSMKDVPSTRSEGLVLASVPKRYDPRDALISNSGKTLMELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-K 181 S++GTSSLRR + +L R D+ + RG I+TRL K AI+LA AG++R+ Sbjct: 120 AGSIVGTSSLRRGSQVLAKRPDLEIQWIRGNIDTRLRKCREENFDAIILAAAGLERVGWT 179 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E ++ E L+ + P+ GQGA+ +E ++ + +EL+ INHE T +V ERAFL ++ Sbjct: 180 EDIVTEFLDPDLCLPAVGQGALGLECREDDYELRELLAHINHEQTAITVAAERAFLRTVE 239 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A + + ++ +V ++DGK + S G D IG + A+ I Sbjct: 240 GGCQVPIGAYATLDEQNQIHLTALVASTDGKQVFKESIIGE--DPEYIGTEVAERILRQG 297 Query: 301 NKNVFN 306 K V + Sbjct: 298 AKGVLD 303 >gi|320449225|ref|YP_004201321.1| porphobilinogen deaminase [Thermus scotoductus SA-01] gi|320149394|gb|ADW20772.1| porphobilinogen deaminase [Thermus scotoductus SA-01] Length = 301 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 107/290 (36%), Positives = 156/290 (53%), Gaps = 8/290 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LALA L + P + + T+GD+ N + +F +E Sbjct: 6 VGTRGSALALAQTRFVVERLKE--SWPEAEFKVKTIKTRGDQGANPM-----EQAIFVKE 58 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +++ L+S EID AVHS KD+PT+ GL+I+A R+D RD F+ + L+DL +V+ Sbjct: 59 LQEALLSREIDIAVHSLKDLPTEEPPGLKIAAIPRRQDPRDAFLGKVYKRLEDLPEGAVV 118 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSS+RRKA +L R D+ V D RG ++TRL L N + I+LA AG+ RL I + Sbjct: 119 GTSSIRRKAQILAHRPDLVVKDLRGNVDTRLAALGNGEYDGIILAAAGLIRLDLRNRIDQ 178 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 L E P+PGQGA+ +E + A+EL ++H + D V ERAFL L C + Sbjct: 179 FLEPEVLLPAPGQGALALEVRQGDDLAEELCYALHHHPSHDRVRAERAFLKGLGAGCLAP 238 Query: 248 IAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + A + TL G+VL DGK F G+ +A +G + AQ + Sbjct: 239 VGALAQVAEDGTLLLEGMVLTPDGKSFIRAEIEGDASEAEELGLELAQDV 288 >gi|254804423|ref|YP_003082644.1| Porphobilinogen deaminase [Neisseria meningitidis alpha14] gi|254667964|emb|CBA04229.1| Porphobilinogen deaminase [Neisseria meningitidis alpha14] Length = 311 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 104/296 (35%), Positives = 167/296 (56%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 GSC+ +A + + L G+V DG + + + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLQADAQASAEYADALGRAVAKKL 294 >gi|241759313|ref|ZP_04757419.1| hydroxymethylbilane synthase [Neisseria flavescens SK114] gi|241320449|gb|EER56746.1| hydroxymethylbilane synthase [Neisseria flavescens SK114] Length = 325 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 103/294 (35%), Positives = 166/294 (56%), Gaps = 2/294 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDRTLSKVGG 72 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 132 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 133 MPKGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 GSC+ +A + + L G+V DG + + A +GR A+ Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAK 306 >gi|328675303|gb|AEB27978.1| Porphobilinogen deaminase [Francisella cf. novicida 3523] Length = 300 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 98/268 (36%), Positives = 157/268 (58%), Gaps = 3/268 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LAL + + IP I + T+GD I ++ L ++GGK L Sbjct: 2 KQITIASRESKLALWQTNFVKKYIQKELNIPCE---ITTMKTQGDIILDKPLNKVGGKAL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E + +G+ + AVHS KD+P +L +G +++++PRED RD F+S+ S+ DL Sbjct: 59 FMKELEIAMQNGKANIAVHSLKDVPYQLPQGFCLASFMPREDPRDAFVSNKYSSIDDLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRRKA LL +R D+ + D RG ++TRL+KL++ + AI+LA AG+ RL+ + Sbjct: 119 GAIVGTSSLRRKAQLLHYRDDLVIKDLRGNVQTRLSKLDSGEYDAIILASAGLIRLELNE 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +E P+ GQG + IE + + E ++ +N ++ ERAF EL G Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALDRDVELLEKLQKLNCSTSFRMATAERAFNQELKGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271 C AI +A + + +V +SDGK Sbjct: 239 CHVAIGAYAELNNNQITLTAMVASSDGK 266 >gi|17229370|ref|NP_485918.1| porphobilinogen deaminase [Nostoc sp. PCC 7120] gi|17130968|dbj|BAB73577.1| porphobilinogen deaminase [Nostoc sp. PCC 7120] Length = 336 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 112/309 (36%), Positives = 169/309 (54%), Gaps = 9/309 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++ RIG+R S LAL + R L + P N + +ST+GD+I + L +IG KG Sbjct: 22 RRTIRIGSRKSQLALVQTYWVREQLQN--SFPDINFEVHTMSTQGDKILDVALAKIGDKG 79 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD-- 120 LFT+E+E +I+ EID AVHS KD+PT L +GL ++A RE+ D + H ++ KD Sbjct: 80 LFTKELEVGMINEEIDFAVHSLKDLPTNLPEGLALAAITERENPADALVVH--ENFKDKQ 137 Query: 121 ---LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L +VIGTSSLRR A L ++ D RG + TRL KL+ + ++LA AG++ Sbjct: 138 IDTLPAGAVIGTSSLRRLAQLRNQFPHLTFKDVRGNLNTRLAKLDAGEYDGLILAAAGLQ 197 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL + +IL E + GQGA+ IE ++ + ++K I H +T D ER+FL Sbjct: 198 RLGMGDRVHQILPKEISLHAVGQGALGIECRADDAELITVLKAIEHPETRDRCLAERSFL 257 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L+G C+ I G+ L G+V + DG+ + + +GN DA IG A+ +R Sbjct: 258 RSLEGGCQVPIGVNTEINGNELILTGVVASVDGQNLVKDTVSGNASDAEAIGIRLAELLR 317 Query: 298 FISNKNVFN 306 + + N Sbjct: 318 EQGAQEILN 326 >gi|294507567|ref|YP_003571625.1| Porphobilinogen deaminase [Salinibacter ruber M8] gi|294343895|emb|CBH24673.1| Porphobilinogen deaminase [Salinibacter ruber M8] Length = 323 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 103/308 (33%), Positives = 171/308 (55%), Gaps = 13/308 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +GTR S LAL A RS L + H + + ++T+GD T+ ++EIG + +F Sbjct: 6 PLVLGTRGSELALRQANVVRSRL----EAAGHRVELETITTRGDEATDTPISEIGDEAVF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSLKDLA 122 T+E+++ L+ G +D AVHS KD+P+ + GL ++A RED RD F++H + L DL Sbjct: 62 TKELDRALLQGGVDLAVHSLKDIPSTVPSGLALAAIGEREDPRDAFVAHPSFDGHLHDLP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + + T+SLRR A LL WRSD+ V+ RG ++TRL KL+ + ++LA AG+ RL Sbjct: 122 EGATVATASLRRTAQLLTWRSDLEVVPVRGNVDTRLEKLSESDWTGMVLAVAGLVRLGLS 181 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELD 241 I++ ++ P+ GQGA+ I + ++L++ ++H + + N ERAFL ++ Sbjct: 182 LHIRDRIDPSLIVPAVGQGALGIACREDQDALRDLLRETLHHAPSGHAANAERAFLKKVG 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIRF 298 G C+ + +A+ TL + A DG E R+ RC D +GR+ A + Sbjct: 242 GGCQVPLGAWAHIDDGTLVLDACIAALDGS---EHYRDERRCAPEDGAAVGRELAADLLA 298 Query: 299 ISNKNVFN 306 + ++ + Sbjct: 299 MGGDHILD 306 >gi|182416929|ref|ZP_02948313.1| porphobilinogen deaminase [Clostridium butyricum 5521] gi|237667199|ref|ZP_04527183.1| hydroxymethylbilane synthase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379227|gb|EDT76728.1| porphobilinogen deaminase [Clostridium butyricum 5521] gi|237655547|gb|EEP53103.1| hydroxymethylbilane synthase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 292 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 160/289 (55%), Gaps = 6/289 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 + TR S LA SL + ++I+ T+GDR + +L +IGGKGLF ++ Sbjct: 6 LATRKSRLAQVQTEIVMDSLKNKINKESEKLLIV---TEGDRKLDVSLNKIGGKGLFVKD 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE L+ G D AVHS KD+P +L +I+A + REDIRDV IS S L + I Sbjct: 63 IECALLEGSADAAVHSMKDVPYELSNEFEITAIIEREDIRDVLISKDGISFSKLRYGAKI 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSS+RR A L RSDI V+ RG ++TRL K+ + I+LA AGI RLK + +I E Sbjct: 123 GTSSIRRAAQLKLLRSDIEVVPIRGNVQTRLAKMESENLDGIILAAAGIHRLKLDSIITE 182 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + ++F P+ QGAI IE V N + + K++++ + +V ER+F+ EL G C S Sbjct: 183 YFDPKEFIPAVSQGAIGIEC-VKNSENSKYFKMLDNSEARITVEAERSFMRELKGDCHSL 241 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I ++ G LY GI + + ++ G + + + +GR A+ I Sbjct: 242 IGAYSEVTGDELYMIGIYDLNGVIVRKDI--KGKKSNHLEVGRKLAEKI 288 >gi|15838228|ref|NP_298916.1| porphobilinogen deaminase [Xylella fastidiosa 9a5c] gi|11386846|sp|Q9PCX7|HEM3_XYLFA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|9106679|gb|AAF84436.1|AE003989_13 hydroxymethylbilane synthase [Xylella fastidiosa 9a5c] Length = 305 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 99/270 (36%), Positives = 154/270 (57%), Gaps = 3/270 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LA+ + + L + P ++V++P+ST+GD I +R+L IGGKGLF Sbjct: 4 LRIATRKSLLAMWQSEYVAARLRMLR--PDLDVVLVPMSTRGDEILDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ G+ DCAVHS KD+P L ++A L R+D D IS+ SL+ L + + Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 + TSSLRR+A L +R D+ + D RG + TRL KL+N AI+LA AG++RL E+ + Sbjct: 122 RVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNGDYDAIVLACAGLRRLGLEQRM 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L ++ P+PGQGAI +E+ + + L+ ++ T V ER L GSC Sbjct: 182 TARLAPPEWLPAPGQGAIAVESLTEDARIGTLLAGLDDLPTRQCVVAERTMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFH 274 + +A + + G+V +DG++ Sbjct: 242 VPVGAYASYEVGGMRLQGLVGCVADGRLVR 271 >gi|323701815|ref|ZP_08113485.1| porphobilinogen deaminase [Desulfotomaculum nigrificans DSM 574] gi|323533119|gb|EGB22988.1| porphobilinogen deaminase [Desulfotomaculum nigrificans DSM 574] Length = 309 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 105/305 (34%), Positives = 164/305 (53%), Gaps = 4/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGK 61 K+ ++G+R S LAL ++TR + + + PH + I+ + TKGD++ + L +IG K Sbjct: 2 KRKIKVGSRDSALAL---WQTRWVVAQLEQQNPHLSFEIVTMKTKGDKMLDVALAKIGDK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT+E+E +++ EID AVHS KDMPT L GL I A R++ D IS + L +L Sbjct: 59 GLFTKELELAMLNKEIDFAVHSLKDMPTALPAGLTIGAVCKRDNPGDALISKDGRKLAEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSSLRR A LL +R D + RG + TR+ K+ + + AI+LA AGI R+ Sbjct: 119 PQGARIGTSSLRRCAQLLNYRPDFRLEALRGNLNTRMKKMASQQLDAIILAAAGIYRMGW 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +I EI+ P+ GQGAI +E ++ + +L++ + H+ T + + ER+ L L+ Sbjct: 179 SDMIAEIIPFNVCLPAVGQGAIAVECREDDIEINQLLQGVEHQPTRVATDAERSLLRRLE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I + L IV DG+ G A +G + A + + Sbjct: 239 GGCQVPIGAYGEVIEDRLSLQAIVATLDGQRLIRAQGEGALNQAEELGIEVADKLLSMGG 298 Query: 302 KNVFN 306 K + Sbjct: 299 KEILQ 303 >gi|300087569|ref|YP_003758091.1| porphobilinogen deaminase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527302|gb|ADJ25770.1| porphobilinogen deaminase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 301 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 107/293 (36%), Positives = 154/293 (52%), Gaps = 3/293 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+G+R S LALA A ++ L P I+ +ST+GDR ++ E+ G G Sbjct: 2 RKIRLGSRSSRLALAQAEYLQARLR--AAFPEVEFDIVRISTQGDRNRLVSMGELPGVGF 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L +GE D AVHS KD+P +L ++A RED RDV IS + L L + Sbjct: 60 FVKEIESALAAGEADIAVHSLKDVPVELPPEFILAAVPEREDTRDVLISR-GRKLDQLPV 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+G+ SLRR + R D+ V RG IETR+ + + A++LA AG+ RL E Sbjct: 119 GAVVGSDSLRRSFQIRARRPDVEVRSIRGNIETRIKAVEEGRVDAVILAAAGLHRLGLET 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I E L + +F P PGQ A+ IE N+ ++E +NH T +V ER+FL L G Sbjct: 179 RIDEYLPLTEFLPPPGQAALGIEVRKNDDFSRETAGAVNHPPTCLAVTAERSFLRRLGGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C++ IA +G L G+V G+ S +G A +G A+ I Sbjct: 239 CRAPIAALGTVEGDVLTLRGMVADEAGRNIISRSLSGTASAAEAVGGALAEMI 291 >gi|237809861|ref|YP_002894301.1| porphobilinogen deaminase [Tolumonas auensis DSM 9187] gi|237502122|gb|ACQ94715.1| porphobilinogen deaminase [Tolumonas auensis DSM 9187] Length = 308 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 107/292 (36%), Positives = 161/292 (55%), Gaps = 3/292 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L ++H P + ++P+ST+GD+I + L +IGGKGLF Sbjct: 4 LRIATRKSPLALWQANFVKQQL-ELHH-PGLQVTLVPMSTQGDKILDTPLAKIGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ ++ D AVHS KD+P GL ++ R+D D F+S S+ +L + Sbjct: 62 KELEQAMLENRADIAVHSMKDVPVDFPDGLGLAVICERDDPYDAFVSSRFASVYELPEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ L R D+ + D RG + TRL KL+ AI+LA AG++RL K + I Sbjct: 122 VVGTSSLRRQCQLRAQRPDLVIRDLRGNVNTRLAKLDAGDYDAIILAAAGLRRLDKAERI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE + + + L+ + H T V ERA L G C+ Sbjct: 182 RSRLPPELSLPANGQGAVGIECRLGDTQTLALLASLEHATTRYCVMAERAMNRTLQGGCQ 241 Query: 246 SAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I FA + + L+ G+V + DGK +G + A +G+ A+ + Sbjct: 242 VPIGAFAEMQDNDHLWLRGLVGSVDGKQIIHGDISGPKEQAEELGKLLAEQL 293 >gi|313676857|ref|YP_004054853.1| hydroxymethylbilane synthase [Marivirga tractuosa DSM 4126] gi|312943555|gb|ADR22745.1| hydroxymethylbilane synthase [Marivirga tractuosa DSM 4126] Length = 311 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 103/269 (38%), Positives = 153/269 (56%), Gaps = 7/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A ++ + + H I + TKGD+I + +++IG KG+FT Sbjct: 3 IRIGTRGSKLALWQAEYVKTRI----EKAGHTAEIKIIQTKGDKILDVAISKIGSKGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKDLALH 124 EEIE +L G ID AVHSAKDM ++L +G + A+ RE + DV +SH + D Sbjct: 59 EEIEAQLEDGNIDIAVHSAKDMQSELPQGFDLIAFTEREKVNDVLVSHKDSIDINDKDNP 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 VIGTSS RR A L + I +D RG ++TR+ K+ AILLAYAG+ R++ + Sbjct: 119 IVIGTSSTRRIATLKHFYPHIKTVDIRGNLQTRIRKMEEGLCDAILLAYAGVHRMEYDDK 178 Query: 185 IKEILNIEDFPPSPGQGAICIETH--VNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 IK L+ ++F P+ GQG++ IE H + + K Q L +NH +T + ERA+L L G Sbjct: 179 IKLELSTQEFIPAVGQGSVAIEVHESIEDDKKQMLRFALNHRNTEYCLRAERAYLRHLQG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 C + G A +++ +++ DG+ Sbjct: 239 GCSIPVFGLATLNSNSIEMEAGIISLDGQ 267 >gi|189351191|ref|YP_001946819.1| porphobilinogen deaminase [Burkholderia multivorans ATCC 17616] gi|189335213|dbj|BAG44283.1| hydroxymethylbilane synthase [Burkholderia multivorans ATCC 17616] Length = 333 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 109/286 (38%), Positives = 163/286 (56%), Gaps = 5/286 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 21 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 78 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+ Sbjct: 79 LESALADGRADLAVHSLKDVPMMLPDGFALAAIMQREDPRDAFVSNDYASLDALPAGAVV 138 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E I+ Sbjct: 139 GTSSLRREAMLRARYPQLQVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEARIRA 198 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L++ED PP+ GQGA+ IE + ++ ++ T +V ER L GSC+ Sbjct: 199 LLDVEDSPPAAGQGALGIEIAAHRTDVAAWLEPLHDAQTALAVEAERMVSRALGGSCEVP 258 Query: 248 IAGFAYCKGSTLYFYGIVLASDGK---IFHEVSRNGNRCDAINIGR 290 +A A + LY G V DG E + DA+ +GR Sbjct: 259 LAAHAVWRAGELYLTGRVSTIDGTRVLTAEECASVVTVADALALGR 304 >gi|11386777|sp|O69110|HEM3_PAEMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|3172405|gb|AAC18587.1| porphobilinogen deaminase [Paenibacillus macerans] Length = 324 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 105/256 (41%), Positives = 155/256 (60%), Gaps = 6/256 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDV---HKIPPHNIVIIPLSTKGDRITNRTLTE 57 M K+ +GTR S LAL + L ++ H +P I + TKGDRI + TL++ Sbjct: 1 MTKRTIVVGTRQSQLALTQTEQVIGDLKELCRAHGLP-FEFEIKKIVTKGDRILDVTLSK 59 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQ 116 IGGKGLF +EIE+ ++ GEID AVHS KDMP+ L +GL I+ +P R+D RD IS + Sbjct: 60 IGGKGLFVKEIEQAMLDGEIDMAVHSMKDMPSVLPEGL-INGGVPLRKDPRDALISRSGL 118 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L +L + +GTS+LRR + LL +R D+ + RG I++RL KL AI+LA AG+ Sbjct: 119 HLHELPQGARVGTSTLRRSSQLLAYRPDLVLEPVRGNIDSRLRKLEEEGFDAIILAAAGL 178 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 +R+ E + L+ + P+ GQGA+ IE N+ + ++++ + N DT +V ER F Sbjct: 179 QRMGWENRVTAYLSADVCLPAVGQGALGIECRENDAELRDVLSLYNDPDTALTVAAERRF 238 Query: 237 LAELDGSCKSAIAGFA 252 LA L+G C+ IA +A Sbjct: 239 LAVLNGGCQVPIAAYA 254 >gi|229105103|ref|ZP_04235754.1| Porphobilinogen deaminase [Bacillus cereus Rock3-28] gi|228678284|gb|EEL32510.1| Porphobilinogen deaminase [Bacillus cereus Rock3-28] Length = 309 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 111/270 (41%), Positives = 156/270 (57%), Gaps = 8/270 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + +S KDLA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGESFKDLAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDNDLLQLLSHMNDAVTERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIF 273 + IAG+A K + +V + DG + Sbjct: 242 QVPIAGYATLTKDDAIELTALVGSMDGSVL 271 >gi|73540406|ref|YP_294926.1| porphobilinogen deaminase [Ralstonia eutropha JMP134] gi|72117819|gb|AAZ60082.1| hydroxymethylbilane synthase [Ralstonia eutropha JMP134] Length = 334 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 103/277 (37%), Positives = 153/277 (55%), Gaps = 2/277 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R++L + P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 23 IASRESRLAMWQAEYVRAALQQYY--PACDVSILGMTTRGDQILDRTLSKVGGKGLFVKE 80 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E + G D AVHS KD+P +L G ++A + RED RD +S T SL+++ +V+ Sbjct: 81 LEFAMAEGRADLAVHSLKDVPMELPDGFALTAVMEREDPRDALVSSTFASLEEMPAGTVV 140 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A L + + RG ++TRL KL+ + AI+LA AG+KRL I+ Sbjct: 141 GTSSLRREAALRARYPHLVIKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGDRIRA 200 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 ++ E P+ GQGA+ IE P + +NH+ T +V ERA L GSC+ Sbjct: 201 LIAPEASLPAAGQGALGIEILSTRPDVAAWLSPLNHQPTALAVTAERAVSRMLGGSCQVP 260 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284 +A A G L V DG S G D Sbjct: 261 LAAHARWVGDQLRLDAFVAMPDGSRQTRASAAGLVVD 297 >gi|325841152|ref|ZP_08167277.1| hydroxymethylbilane synthase [Turicibacter sp. HGF1] gi|325490009|gb|EGC92355.1| hydroxymethylbilane synthase [Turicibacter sp. HGF1] Length = 301 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 106/290 (36%), Positives = 157/290 (54%), Gaps = 3/290 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LAL L H + II TKGD I + +L +IG KGLF E Sbjct: 5 VGTRGSKLALTQTQWVIDQLRKYHPEVEFEVKII--KTKGDLIQHVSLDKIGDKGLFVRE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLALHSV 126 IE++L+ EID AVHS KDMP+KL KGL+ +A RED RDV I ++L+DL + Sbjct: 63 IEQQLLDKEIDIAVHSMKDMPSKLPKGLKFAAVPKREDPRDVLILKDGYKTLEDLPKGAK 122 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGT S RRK LL++R D+ ++ RG I+TR+ K+ + I+LA AGI R ++I Sbjct: 123 IGTGSKRRKYQLLKYRPDLDILSIRGNIDTRIRKIEDENLDGIVLAAAGILRAGMSEMIS 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++ P+P QGA+ I+ + + + L++ I +T V ERAFLA ++G C Sbjct: 183 SYIPVDIMVPAPAQGALAIQIREADLEIEALIESIKDVETEIRVAAERAFLAGVNGGCHI 242 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + +G L G+ + +G G I +G + AQ++ Sbjct: 243 PMGAYCELEGEKLKLTGLYGSENGNCLVRKCLEGGIESPIELGLEVAQFV 292 >gi|295095182|emb|CBK84272.1| hydroxymethylbilane synthase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 273 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 100/254 (39%), Positives = 140/254 (55%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 + T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +GL + Sbjct: 1 MVTRGDVILDTPLAKVGGKGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICE 60 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 RED RD F+S+ SL L SV+GTSSLRR+ L R D+ + RG + TRL KL+ Sbjct: 61 REDPRDAFVSNRYDSLDALPAGSVVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLGKLD 120 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 N AI+LA AG+KRL E+ I+ L E P+ GQGA+ IE + + + Q L+ +N Sbjct: 121 NGDYDAIILAVAGLKRLGLEERIRVALPPELSLPAVGQGAVGIECRLVDARTQALLAPLN 180 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 H+DT V ERA L+G C+ I +A L+ +V A DG R G Sbjct: 181 HDDTAVRVKAERAMNTRLEGGCQVPIGSYAELTDGELWLRALVGAPDGSQMVRGERRGKP 240 Query: 283 CDAINIGRDAAQYI 296 DA +G A+ + Sbjct: 241 QDAEALGVSLAEEL 254 >gi|320335860|ref|YP_004172571.1| Porphobilinogen deaminase [Deinococcus maricopensis DSM 21211] gi|319757149|gb|ADV68906.1| Porphobilinogen deaminase [Deinococcus maricopensis DSM 21211] Length = 313 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 111/294 (37%), Positives = 156/294 (53%), Gaps = 5/294 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITN--RTLTEIGGK 61 + +GTR S LALA + L + P I +STKGDR + TL + G K Sbjct: 6 RSITVGTRGSALALAQTRWVVARLK--EEWPDTEFRIQTISTKGDRDRSSLETLAQKGDK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKD 120 G + +EIE L+S ID AVHS KD+PT +GL+IS+ R + RD I + L D Sbjct: 64 GFWVKEIEDALLSSRIDIAVHSLKDLPTAQPEGLEISSIPKRVEARDALIGKEGMKRLVD 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSS+RRKA L +R D+ V D RG ++TRL L N+ AI+LA AG+ RL+ Sbjct: 124 LPQGARIGTSSVRRKAFLRAFRPDLDVKDLRGNVDTRLAALAGNEYDAIILAAAGLTRLE 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E+++ + P+PGQGA+ +ET ++ A E+ I+ T D ER FLA L Sbjct: 184 MRNRIDELVDPDILLPAPGQGALALETRSDDDLAVEVAYAIHDRATDDRTTAEREFLAGL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 C + + A KG L G V A DG + G+ + ++G A+ Sbjct: 244 GAGCMAPVGALATLKGGVLTLEGWVGALDGTQVIRATIEGDADECADLGAQLAE 297 >gi|309379620|emb|CBX21791.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 326 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 106/296 (35%), Positives = 166/296 (56%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 16 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 74 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNRYARLEE 133 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L +++ RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 134 MPESAVVGTSSLRREAQLRARYPHLAIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 193 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 194 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 253 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 GSC+ +A + + L G+V DG I + A +GR A+ + Sbjct: 254 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSIVLQADAQAPAEYADALGRAVAKKL 309 >gi|239946738|ref|ZP_04698491.1| porphobilinogen deaminase [Rickettsia endosymbiont of Ixodes scapularis] gi|239921014|gb|EER21038.1| porphobilinogen deaminase [Rickettsia endosymbiont of Ixodes scapularis] Length = 350 Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 98/248 (39%), Positives = 150/248 (60%), Gaps = 5/248 (2%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLAL +T + + + P N I+P+ T GD I N+ L +IGGK LF Sbjct: 6 RIGTRKSPLAL---IQTNLVIQQIKQFFPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ +ID AVHS KD+P ++ + L I+A L R+D RDVF+ +S+++L ++ Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEELVIAAVLERKDPRDVFVCLNYKSIEELPQNA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-EKV 184 VIG+S++RRKA + + R D+ FRG +++R+ KL + A +LAYAG+KRL Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKATVFRGNVDSRIKKLMTGEVDATILAYAGLKRLGAFNPE 182 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ P GQG I +E ++ E+ INH T++ + ERAFL LD +C Sbjct: 183 YCHLIEYSQMLPCIGQGVIAVEIRQDDNAMLEICNQINHIPTFELIKPERAFLEYLDANC 242 Query: 245 KSAIAGFA 252 ++ IA ++ Sbjct: 243 RTPIAAYS 250 >gi|94984201|ref|YP_603565.1| porphobilinogen deaminase [Deinococcus geothermalis DSM 11300] gi|123257361|sp|Q1J288|HEM3_DEIGD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|94554482|gb|ABF44396.1| porphobilinogen deaminase [Deinococcus geothermalis DSM 11300] Length = 309 Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 160/289 (55%), Gaps = 5/289 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGGKGLFT 65 +GTR S LALA + L + + P + I +STKGDR ++L + G KG + Sbjct: 6 VGTRGSALALAQTRWVVARLKE--EWPDTDFRIQTISTKGDRDRAALQSLAQKGDKGFWV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLALH 124 +EIE L++G ID AVHS KD+PT+ +GL+I++ R D RDV I + L+DL Sbjct: 64 KEIEDALLAGRIDIAVHSLKDLPTEQPEGLEIASIPKRVDARDVLIGKDGMKRLEDLPSG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSS+RRKA L +R D+ ++D RG I+TRL L AI+LA AG+ R + Sbjct: 124 ARVGTSSVRRKAFLRAYRPDLQILDLRGNIDTRLAALGTPDYDAIVLAAAGLIRTEMRHR 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E ++ + P+PGQGA+ +ET ++ + E+V I+ T D V ER FLA L C Sbjct: 184 IDEFIDPDLLLPAPGQGALALETRADDDLSIEVVYAIHDHATDDRVTAEREFLAGLGAGC 243 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 + + A K L G V A DG + +G+ + ++G + A Sbjct: 244 MAPVGAHATLKDGVLTLEGWVGALDGSQVIRATTSGDPAECADLGAELA 292 >gi|34557903|ref|NP_907718.1| porphobilinogen deaminase [Wolinella succinogenes DSM 1740] gi|55976472|sp|Q7M8L2|HEM3_WOLSU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|34483621|emb|CAE10618.1| PORPHOBILINOGEN DEAMINASE [Wolinella succinogenes] Length = 311 Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 106/288 (36%), Positives = 160/288 (55%), Gaps = 5/288 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LAL A ++ L H+ + I+ TKGD+I + L ++GGKGLFT+E Sbjct: 6 IGTRGSVLALWQAEYVKAELERAHEGLSVELKIV--KTKGDKILDVPLAKVGGKGLFTKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ ++ GEID AVHS KD+P +L++GL +SA RED+RD F+S SL+ L L + + Sbjct: 64 LEEMMLQGEIDLAVHSLKDVPVELIEGLTLSAITEREDVRDCFLSDKYASLETLPLGAKV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+SLRR + RSD+ RG ++TR+ +L AI+LA AG+ RL K + Sbjct: 124 GTTSLRRSMQIKSMRSDLDTESLRGNVQTRIKRLKEGDFDAIILATAGVNRLDLWKEVNY 183 Query: 188 ILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ I E P+ GQ A+ IE +A L +++ + ER F+ L+G C+ Sbjct: 184 VIPIDTEMMIPAMGQAALGIECK-EGSEAFRLTQILEDKKARIETTAEREFVRVLEGGCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 I AY +G TL+ V DG + + +A+ +GR+ A Sbjct: 243 VPIGANAYLEGETLHLKVAVGLPDGSEILMDRLSAPKGEAVRLGRELA 290 >gi|242373962|ref|ZP_04819536.1| hydroxymethylbilane synthase [Staphylococcus epidermidis M23864:W1] gi|242348316|gb|EES39918.1| hydroxymethylbilane synthase [Staphylococcus epidermidis M23864:W1] Length = 308 Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 101/292 (34%), Positives = 174/292 (59%), Gaps = 6/292 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + L ++ P +I I + TKGD+I ++ L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQSQQFIDELKEIE--PDLDIEIKEIVTKGDKIVDKQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+ +L + +ID A+HS KD+P+ + +GL + RE D +IS L +L S++ Sbjct: 64 IQNELFNKDIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHTPLSELPEGSIV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L + + RG I+TRLNKL AI+LA AG++R+ + ++ Sbjct: 124 GTSSLRRGAQILSKYPHLEIKWIRGNIDTRLNKLETEDYDAIILAAAGLRRMGWSDDIVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ + P+ GQGA+ IE ++ + +L+K +++ + V ER FL+E+DGSC+ Sbjct: 184 TYLDKDILLPAIGQGALGIECRSDDEELLDLLKKVHNHEVAQCVTAERTFLSEMDGSCQV 243 Query: 247 AIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 I G+A G S + F G+++ DGK +E + G+ + + +G++ ++ ++ Sbjct: 244 PIGGYATIDGNSQIEFTGLIMTPDGKERYEHTARGH--NPVELGQEVSRVLK 293 >gi|75910970|ref|YP_325266.1| porphobilinogen deaminase [Anabaena variabilis ATCC 29413] gi|75704695|gb|ABA24371.1| hydroxymethylbilane synthase [Anabaena variabilis ATCC 29413] Length = 336 Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 112/309 (36%), Positives = 167/309 (54%), Gaps = 9/309 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++ RIG+R S LAL + R L + P N + +ST+GD+I + L +IG KG Sbjct: 22 RRTIRIGSRKSQLALVQTYWVREQLQN--SFPDINFEVHTMSTQGDKILDVALAKIGDKG 79 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD-- 120 LFT+E+E +I+ EID AVHS KD+PT L +GL ++A RE+ D + H ++ KD Sbjct: 80 LFTKELEVGMINEEIDFAVHSLKDLPTNLPEGLALAAITERENPADALVVH--ENFKDKQ 137 Query: 121 ---LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L +VIGTSSLRR A L ++ D RG + TRL KL+ + ++LA AG++ Sbjct: 138 IDTLPAGAVIGTSSLRRLAQLRNQFPHLTFKDVRGNLNTRLAKLDAGEYDGLILAAAGLQ 197 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I ++L E + GQGA+ IE N+ + ++K I H T D ER+FL Sbjct: 198 RLGMGDRIHQVLPKEVSLHAVGQGALGIECRANDAELITILKAIEHPQTRDRCLAERSFL 257 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L+G C+ I G L G+V + DG+ + + +G+ DA IG A+ +R Sbjct: 258 RSLEGGCQVPIGVNTEINGDELILTGVVASVDGQNLVKDTVSGDASDAEAIGIRLAELLR 317 Query: 298 FISNKNVFN 306 + + N Sbjct: 318 EQGAQEILN 326 >gi|293374464|ref|ZP_06620786.1| hydroxymethylbilane synthase [Turicibacter sanguinis PC909] gi|292646843|gb|EFF64831.1| hydroxymethylbilane synthase [Turicibacter sanguinis PC909] Length = 301 Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 105/290 (36%), Positives = 157/290 (54%), Gaps = 3/290 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LAL L H P + + TKGD I + +L +IG KGLF E Sbjct: 5 VGTRGSKLALTQTQWVIDQLRKYH--PEVEFEVKIIKTKGDLIQHVSLDKIGDKGLFVRE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLALHSV 126 IE++L+ EID AVHS KDMP+KL KGL+ +A RED RDV I ++L+DL + Sbjct: 63 IEQQLLDKEIDIAVHSMKDMPSKLPKGLKFAAVPKREDPRDVLILKDGYKTLEDLPKGAK 122 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGT S RRK LL++R D+ ++ RG I+TR+ K+ + I+LA AGI R ++I Sbjct: 123 IGTGSKRRKYQLLKYRPDLDILSIRGNIDTRIRKIEDENLDGIVLAAAGILRAGMSEMIS 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++ P+P QGA+ I+ + + + L++ I +T V ERAFLA ++G C Sbjct: 183 SYIPVDIMVPAPAQGALAIQIREADLEIEALIESIKDVETEIRVAAERAFLAGVNGGCHI 242 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + +G L G+ + +G G I +G + AQ++ Sbjct: 243 PMGAYCELEGDKLKLTGLYGSENGNCLVRKCLEGGIESPIELGLEVAQFV 292 >gi|169831506|ref|YP_001717488.1| porphobilinogen deaminase [Candidatus Desulforudis audaxviator MP104C] gi|238058920|sp|B1I4L8|HEM3_DESAP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|169638350|gb|ACA59856.1| porphobilinogen deaminase [Candidatus Desulforudis audaxviator MP104C] Length = 309 Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 106/287 (36%), Positives = 157/287 (54%), Gaps = 4/287 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++ +GTR S LALA A L + P + V + T GD I L +IG KG Sbjct: 2 RREVVVGTRGSRLALAQADWVIDHLR--ARYPRVSFVRKEIRTTGDNILEVALAKIGDKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E+ L+ EID AVHS KD+PT L +GL I A RE DVFIS + L++L Sbjct: 60 LFTKELEQALLHREIDLAVHSMKDLPTGLPEGLVIGAVSVREYPGDVFISRGGERLEELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR A LL +R D+ VI RG ++TRL KL+ A++LA+AG+ RL Sbjct: 120 AGAVLGTSSLRRTAQLLAYRPDLQVIPVRGNVQTRLRKLDEGVVDALVLAWAGLFRLGLT 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + + + P+ GQGA+ IE ++ + E+++ I+H T +V ER L L+G Sbjct: 180 ERVTHRIPVAMCLPAVGQGALGIEARADDAEILEMLRTIDHAPTRAAVQAERTLLRRLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAIN 287 C+ + + L +V + DG +G +R +A+ Sbjct: 240 GCQVPVGALGRFRDGRLVLEAVVASLDGTELVRAQESGPADRPEALG 286 >gi|71899004|ref|ZP_00681170.1| Porphobilinogen deaminase [Xylella fastidiosa Ann-1] gi|71731250|gb|EAO33315.1| Porphobilinogen deaminase [Xylella fastidiosa Ann-1] Length = 305 Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 105/293 (35%), Positives = 164/293 (55%), Gaps = 6/293 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LA+ + + L + P ++V++P+ST+GD I +R+L IGGKGLF Sbjct: 4 LRIATRKSLLAMWQSEYVAARLRML--CPDLDVVLVPMSTRGDEILDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ G+ DCAVHS KD+P L ++A L R+D D IS+ SL+ L + + Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 + TSSLRR+A L +R D+ + D RG + TRL KL+N AI+LA AG++RL E+ + Sbjct: 122 RVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNGDYDAIVLACAGLRRLGLEQRM 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L ++ P+PGQGAI +E+ + + L+ ++ T V ER L GSC Sbjct: 182 TARLAPPEWLPAPGQGAIAVESLTEDARIATLLAGLDDLPTRQCVVAERTMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFH-EVSRNGNRCDAINIGRDAAQYI 296 + +A + + G+V +DG++ E+ + D +GR AQ + Sbjct: 242 VPVGAYASYEVGGMRLQGLVGCVADGRLVRAELCSAKDEGD--MLGRAVAQCL 292 >gi|134300009|ref|YP_001113505.1| porphobilinogen deaminase [Desulfotomaculum reducens MI-1] gi|189028090|sp|A4J6H7|HEM3_DESRM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|134052709|gb|ABO50680.1| hydroxymethylbilane synthase [Desulfotomaculum reducens MI-1] Length = 309 Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 108/305 (35%), Positives = 161/305 (52%), Gaps = 4/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGK 61 K +G+R S LAL ++TR + + K P I + TKGD++ + L +IG K Sbjct: 2 KHKITVGSRDSALAL---WQTRWVVEQLEKQNPDVTFEITTMKTKGDKMLDVALAKIGDK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT+E+E ++ EID AVHS KDMPT L +GL I A R++ D IS + L +L Sbjct: 59 GLFTKELEVAMLQKEIDFAVHSLKDMPTALPEGLIIGAVCKRDNPGDALISKDGRKLDEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSSLRR A LL +R D + RG + TR+ KL + + I+LA AGI R+ Sbjct: 119 PKGARIGTSSLRRCAQLLNYRPDFQLEALRGNLNTRMKKLVSEQLDGIILAAAGITRMGW 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E +I EI+ + P+ GQGAI +E ++P+ L+K I H +T + ER+ L L+ Sbjct: 179 EDMIAEIIPFQVCLPAVGQGAISVECREDDPEILNLLKGIEHTETKAATEAERSLLRYLE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I + K + L +V DG A+ +G + A+ + + Sbjct: 239 GGCQVPIGAHSEVKNNRLMLTAVVATLDGTKVIRAQGENEVNKAVELGIEVAEKLMAMGG 298 Query: 302 KNVFN 306 K + Sbjct: 299 KKILE 303 >gi|313668981|ref|YP_004049265.1| porphobilinogen deaminase [Neisseria lactamica ST-640] gi|313006443|emb|CBN87906.1| putative porphobilinogen deaminase [Neisseria lactamica 020-06] Length = 326 Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 106/296 (35%), Positives = 166/296 (56%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 16 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 74 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNRYARLEE 133 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L +++ RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 134 MPKGAVVGTSSLRREAQLRARYPHLAIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 193 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 194 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 253 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 GSC+ +A + + L G+V DG I + A +GR A+ + Sbjct: 254 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSIVLQADAQAPAEYADALGRAVAKKL 309 >gi|221211567|ref|ZP_03584546.1| porphobilinogen deaminase [Burkholderia multivorans CGD1] gi|221168928|gb|EEE01396.1| porphobilinogen deaminase [Burkholderia multivorans CGD1] Length = 333 Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 109/286 (38%), Positives = 163/286 (56%), Gaps = 5/286 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 21 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 78 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+ Sbjct: 79 LESALADGRADLAVHSLKDVPMMLPDGFALAAIMRREDPRDAFVSNDYASLDALPAGAVV 138 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E I+ Sbjct: 139 GTSSLRREAMLRARYPQLQVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEARIRA 198 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L++ED PP+ GQGA+ IE + ++ ++ T +V ER L GSC+ Sbjct: 199 LLDVEDSPPAAGQGALGIEIAAHRTDVAAWLEPLHDAQTALAVEAERMVSRALGGSCEVP 258 Query: 248 IAGFAYCKGSTLYFYGIVLASDGK---IFHEVSRNGNRCDAINIGR 290 +A A + LY G V DG E + DA+ +GR Sbjct: 259 LAAHAVWRAGELYLTGRVSTIDGTRVLTAEECASVVTVADALALGR 304 >gi|161524048|ref|YP_001579060.1| porphobilinogen deaminase [Burkholderia multivorans ATCC 17616] gi|160341477|gb|ABX14563.1| porphobilinogen deaminase [Burkholderia multivorans ATCC 17616] Length = 402 Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 109/286 (38%), Positives = 163/286 (56%), Gaps = 5/286 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 90 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 147 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+ Sbjct: 148 LESALADGRADLAVHSLKDVPMMLPDGFALAAIMQREDPRDAFVSNDYASLDALPAGAVV 207 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E I+ Sbjct: 208 GTSSLRREAMLRARYPQLQVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEARIRA 267 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L++ED PP+ GQGA+ IE + ++ ++ T +V ER L GSC+ Sbjct: 268 LLDVEDSPPAAGQGALGIEIAAHRTDVAAWLEPLHDAQTALAVEAERMVSRALGGSCEVP 327 Query: 248 IAGFAYCKGSTLYFYGIVLASDGK---IFHEVSRNGNRCDAINIGR 290 +A A + LY G V DG E + DA+ +GR Sbjct: 328 LAAHAVWRAGELYLTGRVSTIDGTRVLTAEECASVVTVADALALGR 373 >gi|226942049|ref|YP_002797123.1| porphobilinogen deaminase [Laribacter hongkongensis HLHK9] gi|254800253|sp|C1D679|HEM3_LARHH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226716976|gb|ACO76114.1| Hem3 [Laribacter hongkongensis HLHK9] Length = 308 Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 104/286 (36%), Positives = 157/286 (54%), Gaps = 4/286 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R SPLA+ A R+ L ++ P + I+ ++T+GDRI ++TL +IGGKGL Sbjct: 2 KQVVIASRESPLAMWQAEHIRARLQALY--PGLEVSILGITTQGDRILDKTLNKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E + G+ D AVHS KD+P L +G ++A RED RD F+S SL +L Sbjct: 60 FVKELELAMQEGQADLAVHSIKDVPMDLPEGFALAAICEREDPRDAFVSSRYASLSELPA 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GT+SLRR++ + + V RG ++TRL KL+ + AI+LA +G+KR+ + Sbjct: 120 GAVVGTASLRRESQIRARYPHLLVKPLRGNLQTRLRKLDEGQYDAIILAASGLKRMGLAE 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L+ D P+ GQGA+ IE + L+ +NH T+ V ERA L S Sbjct: 180 RIRMELSTADSLPAVGQGALGIEIRADRTDLMALLAPLNHPATYACVTAERAMGRALGAS 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG-KIFH-EVSRNGNRCDAIN 287 C+ + G+A L G V DG + H E + DA+ Sbjct: 240 CQIPVGGYAEQHEHMLVMRGFVATPDGTTLLHAEATAPAEYADALG 285 >gi|299533189|ref|ZP_07046573.1| porphobilinogen deaminase [Comamonas testosteroni S44] gi|298718719|gb|EFI59692.1| porphobilinogen deaminase [Comamonas testosteroni S44] Length = 314 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 100/273 (36%), Positives = 156/273 (57%), Gaps = 7/273 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LA+ A ++ L + H++ ++ ++TKGD+I +R L+++GGKGLF +E Sbjct: 13 IATRESQLAMWQAEHVQAIL----RGRGHSVDLLGMTTKGDQILDRALSKVGGKGLFVKE 68 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P +L +G ++ + RED RD F+S+ SL +L +V+ Sbjct: 69 LEVALEEGRADLAVHSLKDVPMELPEGFVLACVMTREDPRDAFVSNRYASLDELPQGAVV 128 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+ALL R D+ + RG + TRL KL+ + AI+LA AG+ RL+ + I+ Sbjct: 129 GTSSLRRQALLQALRPDLKIEALRGNVNTRLRKLDEGQYDAIVLAAAGLMRLEMSERIRA 188 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + P+ GQGA+ IE + + + + H TW +V ERA + GSC Sbjct: 189 KFDPAQMLPAAGQGALGIEVRADRQDIIDALAPLAHMPTWLTVTAERAVSRCMGGSCSMP 248 Query: 248 IAGFAYCKGSTLYF---YGIVLASDGKIFHEVS 277 +A + +G TL+ +G + S G + + S Sbjct: 249 LAAYGRFEGDTLHMDAAWGDMEGSKGLVRVQAS 281 >gi|221199353|ref|ZP_03572397.1| porphobilinogen deaminase [Burkholderia multivorans CGD2M] gi|221205745|ref|ZP_03578760.1| porphobilinogen deaminase [Burkholderia multivorans CGD2] gi|221174583|gb|EEE07015.1| porphobilinogen deaminase [Burkholderia multivorans CGD2] gi|221180638|gb|EEE13041.1| porphobilinogen deaminase [Burkholderia multivorans CGD2M] Length = 333 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 109/286 (38%), Positives = 163/286 (56%), Gaps = 5/286 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 21 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 78 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+ Sbjct: 79 LESALADGRADLAVHSLKDVPMMLPDGFALAAIMQREDPRDAFVSNDYASLDALPAGAVV 138 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E I+ Sbjct: 139 GTSSLRREAMLRARYPHLQVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEARIRA 198 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L++ED PP+ GQGA+ IE + ++ ++ T +V ER L GSC+ Sbjct: 199 LLDVEDSPPAAGQGALGIEIAAHRADVAAWLEPLHDAQTALAVEAERMVSRALGGSCEVP 258 Query: 248 IAGFAYCKGSTLYFYGIVLASDGK---IFHEVSRNGNRCDAINIGR 290 +A A + LY G V DG E + DA+ +GR Sbjct: 259 LAAHAVWRAGELYLTGRVSTIDGTRVLTAEECASVVTVADALALGR 304 >gi|258424087|ref|ZP_05686969.1| porphobilinogen deaminase [Staphylococcus aureus A9635] gi|257845708|gb|EEV69740.1| porphobilinogen deaminase [Staphylococcus aureus A9635] Length = 308 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 105/292 (35%), Positives = 166/292 (56%), Gaps = 6/292 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+ +L ID A+HS KD+P+ + +GL + RE D +IS T L +L S+I Sbjct: 64 IQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSELPEGSII 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + ++ Sbjct: 124 GTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSDDIVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DGSC+ Sbjct: 184 SYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDGSCQV 243 Query: 247 AIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 IAG+A + F G+++ DGK E + NG D + +G+ + ++ Sbjct: 244 PIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKKVSNKLK 293 >gi|264679667|ref|YP_003279574.1| porphobilinogen deaminase [Comamonas testosteroni CNB-2] gi|262210180|gb|ACY34278.1| porphobilinogen deaminase [Comamonas testosteroni CNB-2] Length = 314 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 100/273 (36%), Positives = 156/273 (57%), Gaps = 7/273 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LA+ A ++ L + H++ ++ ++TKGD+I +R L+++GGKGLF +E Sbjct: 13 IATRESQLAMWQAEHVQAIL----RGRGHSVDLLGMTTKGDQILDRALSKVGGKGLFVKE 68 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P +L +G ++ + RED RD F+S+ SL +L +V+ Sbjct: 69 LEVALEEGRADLAVHSLKDVPMELPEGFVLACVMTREDPRDAFVSNRYASLDELPQGAVV 128 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+ALL R D+ + RG + TRL KL+ + AI+LA AG+ RL+ + I+ Sbjct: 129 GTSSLRRQALLQALRPDLKIEALRGNVNTRLRKLDEGQYDAIVLAAAGLMRLEMSERIRA 188 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + P+ GQGA+ IE + + + + H TW +V ERA + GSC Sbjct: 189 RFDPAQMLPAAGQGALGIEVRADRQDIIDALAPLAHMPTWLTVTAERAVSRCMGGSCSMP 248 Query: 248 IAGFAYCKGSTLYF---YGIVLASDGKIFHEVS 277 +A + +G TL+ +G + S G + + S Sbjct: 249 LAAYGRFEGDTLHMDAAWGDMEGSKGLVRVQAS 281 >gi|121634334|ref|YP_974579.1| porphobilinogen deaminase [Neisseria meningitidis FAM18] gi|120866040|emb|CAM09778.1| putative porphobilinogen deaminase [Neisseria meningitidis FAM18] gi|325131787|gb|EGC54488.1| porphobilinogen deaminase [Neisseria meningitidis M6190] gi|325137677|gb|EGC60254.1| porphobilinogen deaminase [Neisseria meningitidis ES14902] Length = 311 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 104/296 (35%), Positives = 166/296 (56%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLQADAQAPAEYADALGRAVAKKL 294 >gi|163942212|ref|YP_001647096.1| porphobilinogen deaminase [Bacillus weihenstephanensis KBAB4] gi|229836104|sp|A9VIT8|HEM3_BACWK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|163864409|gb|ABY45468.1| porphobilinogen deaminase [Bacillus weihenstephanensis KBAB4] Length = 309 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 112/270 (41%), Positives = 155/270 (57%), Gaps = 8/270 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S KDLA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPDGLTIGCTPKRVDPRDAFISKNGESFKDLAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + +V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWDGEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFAYCK-GSTLYFYGIVLASDGKIF 273 + IAG+A K + +V + DG + Sbjct: 242 QVPIAGYATLKENDAIELTALVGSMDGSVL 271 >gi|228910299|ref|ZP_04074116.1| Porphobilinogen deaminase [Bacillus thuringiensis IBL 200] gi|228849359|gb|EEM94196.1| Porphobilinogen deaminase [Bacillus thuringiensis IBL 200] Length = 309 Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 113/285 (39%), Positives = 161/285 (56%), Gaps = 8/285 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLSHINDAITERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 + IAG+A K T+ +V + DG + + + G + + + Sbjct: 242 QVPIAGYATLKENDTIELTALVGSMDGSVLLKETVVGTNPEEVGL 286 >gi|171463846|ref|YP_001797959.1| porphobilinogen deaminase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193384|gb|ACB44345.1| porphobilinogen deaminase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 321 Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 95/264 (35%), Positives = 157/264 (59%), Gaps = 2/264 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A + L ++ P ++ I+ ++T+GD+I +R L+++GGKGLF +E Sbjct: 18 IASRESRLAMWQAEHVQDCLKKLY--PDCDVQILGMTTRGDQILDRALSKVGGKGLFVKE 75 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P + +G ++ + RED RD F+S+ SL+DL + +++ Sbjct: 76 LETALEDGRADLAVHSLKDVPMVMPEGFDLACVMAREDARDAFVSNDYASLEDLPIGAIV 135 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+++L + + RG ++TR+ KL+ + AI+LA AG+KRL E I+ Sbjct: 136 GTSSLRRESVLRAKFPHLVIQPLRGNLDTRMGKLDKGEYQAIILAAAGLKRLGLESRIRA 195 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 L + + P+ GQGA+ IET +P ++ + +N T +V+ ER +L GSC+ Sbjct: 196 FLPYDPYTPAAGQGALGIETLSKHPNIKQWLAPLNDLPTLFAVSAERMVSRQLGGSCEVP 255 Query: 248 IAGFAYCKGSTLYFYGIVLASDGK 271 +A A + + V ++DGK Sbjct: 256 LAAHAVRDQNQMQIRSFVASTDGK 279 >gi|85710451|ref|ZP_01041515.1| porphobilinogen deaminase [Erythrobacter sp. NAP1] gi|85687629|gb|EAQ27634.1| porphobilinogen deaminase [Erythrobacter sp. NAP1] Length = 292 Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 95/254 (37%), Positives = 140/254 (55%), Gaps = 3/254 (1%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 +A AFETR L H + ++P+ GD++ +R L EIGGK L+T+E++ L G+ Sbjct: 1 MAQAFETRERLCKAHGWAEGEVELVPVVASGDKVLDRPLAEIGGKALWTKELDAWLAEGK 60 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 ID AVHSAKD+ T + +A+LPR D RD + A S+ D+ + +GTS+ RR + Sbjct: 61 IDVAVHSAKDVETIRPDAFRFAAFLPRADRRDALVG--AASIADIPRGATVGTSAPRRAS 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 LL R D V+ FRG + TRL KL +A LA AG++RL + +V L D+ P Sbjct: 119 QLLNLRPDCKVVTFRGNVATRLGKLEAGEADVTFLAAAGLERLGQSEV-GAPLETGDWIP 177 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + QG I +E ++ +A EL+ I+H T + ERA LA+L G+C S +A Sbjct: 178 AAAQGVIALECRADDDEAGELLAAIDHAATRAELEAERALLAKLGGTCHSPVAVLCSGDA 237 Query: 257 STLYFYGIVLASDG 270 L + + DG Sbjct: 238 GELTMRAALFSPDG 251 >gi|196034473|ref|ZP_03101882.1| porphobilinogen deaminase [Bacillus cereus W] gi|228948178|ref|ZP_04110462.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|195993015|gb|EDX56974.1| porphobilinogen deaminase [Bacillus cereus W] gi|228811536|gb|EEM57873.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 309 Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 116/290 (40%), Positives = 164/290 (56%), Gaps = 10/290 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + +V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAYINDAVTERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 + IAG+A + + +V + DG I + + G D +G +AA Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSILLKETVVGT--DPEKVGLEAA 289 >gi|152992229|ref|YP_001357950.1| porphobilinogen deaminase [Sulfurovum sp. NBC37-1] gi|166217789|sp|A6Q7Y4|HEM3_SULNB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|151424090|dbj|BAF71593.1| porphobilinogen deaminase [Sulfurovum sp. NBC37-1] Length = 323 Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 98/249 (39%), Positives = 147/249 (59%), Gaps = 4/249 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK I TR S LAL A+ + + P + + +++KGD+I ++ L +GG Sbjct: 1 MEK--LVIATRASNLALWQAYHIKERIETA--FPEVRVELNEITSKGDKILDKPLALVGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG FT+E+E ++I+G AVHS KD+PT + +GL++ A R+D DVF+SHT +SL + Sbjct: 57 KGHFTKELEDEMIAGNAHLAVHSLKDVPTYIPEGLELCAITERQDQSDVFLSHTYKSLSE 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT+SLRR+ LL R D+ V D RG + TRL KL + AI+LAY G+ RL Sbjct: 117 LPEGAVVGTTSLRRRMQLLEKRPDLKVKDLRGNVNTRLRKLKEGQYDAIILAYIGLYRLD 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K I + ++ F P GQ A+ IE NN + +E+ +NHE T+ ER F++ + Sbjct: 177 LLKDIPYVEKLDFFIPPMGQAALGIEIVANNDRIREIAMTLNHEPTFICTKVERDFISVI 236 Query: 241 DGSCKSAIA 249 C + +A Sbjct: 237 GAGCSAPVA 245 >gi|326317960|ref|YP_004235632.1| porphobilinogen deaminase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374796|gb|ADX47065.1| porphobilinogen deaminase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 318 Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 100/260 (38%), Positives = 146/260 (56%), Gaps = 5/260 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P I TR S LAL A ++ L + H + ++ ++TKGD+I +RTL+++GGKGLF Sbjct: 17 PIVIATRESRLALWQAEHVQALL----RARGHAVELLGMTTKGDQILDRTLSKVGGKGLF 72 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G AVHS KD+P +L +G +++ + RED RD F+S L DL Sbjct: 73 VKELEVALEEGRAHVAVHSLKDVPMELPEGFELACVMEREDPRDAFVSPRHACLADLPQG 132 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL E Sbjct: 133 AVVGTSSLRRQVLLQALRPDLDIQPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGMEDR 192 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + ++ P+ GQGA+ +E + V + H+ TW V ERA L GSC Sbjct: 193 IRALFEPDEMLPAAGQGALGLEVRSERHDLLQAVAPLAHQATWLCVAAERAVSRALGGSC 252 Query: 245 KSAIAGFA-YCKGSTLYFYG 263 +A + TL G Sbjct: 253 SVPLAAHGRWTDAGTLRLDG 272 >gi|253575681|ref|ZP_04853017.1| porphobilinogen deaminase [Paenibacillus sp. oral taxon 786 str. D14] gi|251845019|gb|EES73031.1| porphobilinogen deaminase [Paenibacillus sp. oral taxon 786 str. D14] Length = 320 Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 119/313 (38%), Positives = 165/313 (52%), Gaps = 18/313 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDV---HKIPPHNIVIIPLSTKGDRITNRTLTE 57 M K+ +GTR S LAL + L + H +P + I + TKGDRI + TL++ Sbjct: 1 MTKRTIVVGTRQSQLALTQTGQVIDDLKAICREHHLP-FDFEIRKIVTKGDRILDVTLSK 59 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 +GGKGLF +EIE+ +++GEID AVHS KDMP+ L GL A R D RD IS +S Sbjct: 60 VGGKGLFVKEIEQAMLNGEIDLAVHSMKDMPSVLPDGLMNGAVPRRVDPRDALISRNGRS 119 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L +L + +GTSSLRR + L +R D + RG I++RL KL AI+LA AG+ Sbjct: 120 LDELPQGAKVGTSSLRRASQLRAYRPDFVLEPIRGNIDSRLRKLEEEGFDAIILAAAGLF 179 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ E I L E P+ GQGA+ IE ++ + + L+ + N DT +V ER FL Sbjct: 180 RMGWEHRITAFLPAEVCLPAVGQGALGIECREDDDEVRRLLSLYNDPDTAVTVAAERRFL 239 Query: 238 AELDGSCKSAIAGFAY------CKGST----LYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 L+G C+ I +A G T L G+V ++DG + S G D Sbjct: 240 GVLNGGCQVPIGAYATLLPEEGASGETGRPRLRLTGMVGSADGTTILKESAEGT--DPTE 297 Query: 288 IGRDAAQYIRFIS 300 +G A R IS Sbjct: 298 LGEQLAG--RLIS 308 >gi|87117972|gb|ABD20293.1| HemC [Shigella boydii] Length = 272 Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 99/259 (38%), Positives = 144/259 (55%), Gaps = 2/259 (0%) Query: 27 LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKD 86 LM H P + ++P+ T GD I + L ++ GKGLF +E++ L+ D AVHS KD Sbjct: 1 LMTSH--PGLVVELVPMVTPGDVILDTPLAKVCGKGLFVKELDVALLENRADIAVHSMKD 58 Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDIS 146 +P + +GL + RED RD F+S+T SL L S++GTSSLRR+ L R D+ Sbjct: 59 VPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDALPAGSIVGTSSLRRQCQLAERRPDLI 118 Query: 147 VIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206 + RG + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE Sbjct: 119 IRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEVSLPAVGQGAVGIE 178 Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVL 266 +N+ + + L+ +NH +T V ERA L+G C+ I +A ++ +V Sbjct: 179 CRLNDTRTRALLAALNHNETALRVTAERAMNTRLEGGCQVPIGSYAELVDGEIWLLALVG 238 Query: 267 ASDGKIFHEVSRNGNRCDA 285 A DG R G+ DA Sbjct: 239 APDGSQIIRGERRGSPQDA 257 >gi|149181766|ref|ZP_01860257.1| porphobilinogen deaminase [Bacillus sp. SG-1] gi|148850507|gb|EDL64666.1| porphobilinogen deaminase [Bacillus sp. SG-1] Length = 310 Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 109/291 (37%), Positives = 162/291 (55%), Gaps = 6/291 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL S L ++ + + TKGD+I + TL+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQTNWVISQLKELDS--SFEFEVKEIVTKGDQILDVTLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ ++ EID AVHS KDMP +L +GL I RED RD FIS L DL ++I Sbjct: 64 IEQAMLDKEIDMAVHSMKDMPAELPEGLCIGCIPEREDHRDAFISKDHVKLADLPAGAII 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L R D+ + RG I+TRL KL AI+LA AG+ R+ V+ Sbjct: 124 GTSSLRRGAQILAQRPDLEIKWIRGNIDTRLGKLETEDYDAIILAAAGLSRMGWTSNVVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E L+ E P+ GQGA+ IE ++ + L+ + +V ER FL +++G C+ Sbjct: 184 EFLDPEVCVPAVGQGALSIECREDDEELLGLLGKFASDQVTKTVTAERTFLHKMEGGCQV 243 Query: 247 AIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 IAG+A + + +V + DGK ++ + G+ D + +G +AA + Sbjct: 244 PIAGYAELLQEEDVKLTVLVASPDGKDIYKETVTGS--DPVQVGEEAAALL 292 >gi|296314908|ref|ZP_06864849.1| hydroxymethylbilane synthase [Neisseria polysaccharea ATCC 43768] gi|296838093|gb|EFH22031.1| hydroxymethylbilane synthase [Neisseria polysaccharea ATCC 43768] Length = 311 Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 105/296 (35%), Positives = 165/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCKVEILGMTTRGDRILDRTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNRYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L +++ RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPESAVVGTSSLRREAQLRARYPHLAIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILRADAQAPAGYADALGRAVAKKL 294 >gi|71275417|ref|ZP_00651703.1| Porphobilinogen deaminase [Xylella fastidiosa Dixon] gi|71898589|ref|ZP_00680760.1| Porphobilinogen deaminase [Xylella fastidiosa Ann-1] gi|170730394|ref|YP_001775827.1| porphobilinogen deaminase [Xylella fastidiosa M12] gi|238059006|sp|B0U2W8|HEM3_XYLFM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|71163717|gb|EAO13433.1| Porphobilinogen deaminase [Xylella fastidiosa Dixon] gi|71731713|gb|EAO33773.1| Porphobilinogen deaminase [Xylella fastidiosa Ann-1] gi|167965187|gb|ACA12197.1| Hydroxymethylbilane synthase [Xylella fastidiosa M12] Length = 305 Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 99/270 (36%), Positives = 153/270 (56%), Gaps = 3/270 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LA+ + + L + P ++V++P+ST+GD I +R+L IGGKGLF Sbjct: 4 LRIATRKSLLAMRQSEYVAARLRML--CPDLDVVLVPMSTRGDEILDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ G+ DCAVHS KD+P L ++A L R+D D IS+ SL+ L + + Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 + TSSLRR+A L +R D+ + D RG + TRL KL+N AI+LA AG++RL E+ + Sbjct: 122 RVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNGDYDAIVLACAGLRRLGLEQRM 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L ++ P+PGQGAI +E+ + + L+ ++ T V ER L GSC Sbjct: 182 TARLAPPEWLPAPGQGAIAVESLTEDARIGTLLAGLDDLPTRQCVVAERTMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFH 274 + +A + G+V +DG++ Sbjct: 242 VPVGAYASYGVGGMRLQGLVGCVADGRLVR 271 >gi|289550573|ref|YP_003471477.1| Porphobilinogen deaminase [Staphylococcus lugdunensis HKU09-01] gi|289180105|gb|ADC87350.1| Porphobilinogen deaminase [Staphylococcus lugdunensis HKU09-01] Length = 310 Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 103/276 (37%), Positives = 164/276 (59%), Gaps = 4/276 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + L +++ P I I + TKGD+I ++ L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQSKQFIDKLKEIN--PDLEIEIKEIVTKGDQILDKQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+ +L + EID A+HS KD+P+ L +GL + RE+ D +I+ L L S+I Sbjct: 64 IQHELFNKEIDFAIHSLKDVPSILPEGLTLGCIPDRENPFDAYIAKNHTPLDQLPDGSII 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L ++ + RG I+TRL+KL AI+LA AG+KR+ + ++ Sbjct: 124 GTSSLRRGAQILAKYPNLEIKWIRGNIDTRLHKLETENYDAIILAAAGLKRMGWSDDIVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ + P+ GQGA+ IE ++ + L+K ++++ D V ER FLA +DGSC+ Sbjct: 184 TYLDKDVLLPAIGQGALGIECRSDDVELLALLKQVHNQQVADCVTAERTFLAAMDGSCQV 243 Query: 247 AIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGN 281 I G+A K + F G+++ DGK +E + +GN Sbjct: 244 PIGGYAMNKPNGDIEFTGLIMTPDGKERYEHTESGN 279 >gi|15893393|ref|NP_346742.1| porphobilinogen deaminase [Clostridium acetobutylicum ATCC 824] gi|25453028|sp|Q97MU4|HEM3_CLOAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|15022921|gb|AAK78082.1|AE007522_6 Hydroxymrthylbilane syntase (porphobilinogen deaminase) [Clostridium acetobutylicum ATCC 824] gi|325507505|gb|ADZ19141.1| porphobilinogen deaminase [Clostridium acetobutylicum EA 2018] Length = 291 Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 163/289 (56%), Gaps = 6/289 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LA + L D + I ++ + T GD+I +++L +IGGKGLF ++ Sbjct: 5 IATRKSKLAQVQTELIINVLKDKYGISSEKLL---METLGDKILDKSLADIGGKGLFIKD 61 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ L+ + D AVHS KD+P ++ +I+A R D+RDVF+S KDL +VI Sbjct: 62 IERILLEDKADAAVHSMKDVPFEVPDMFEIAAVTLRVDVRDVFVSRDGTHFKDLKNGAVI 121 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSS RR A L R DI V+ RG ++TR+ K+ K I+LA AG+KRL E +I + Sbjct: 122 GTSSNRRAAQLKMLRDDIKVVPIRGNVQTRIRKMGEEKLDGIILAAAGLKRLNMENIITD 181 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 ++E+ P+ GQGA+ +E N K ++L + ++++++ V ER+F+ L+G C S Sbjct: 182 YFSVEEMIPAVGQGALGVEIKKEN-KNRDLFRKLDNKNSRMCVEAERSFMRTLNGDCHST 240 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A + G ++ +VS GN D +++G+ A+ I Sbjct: 241 IGAYAEIVNGQMNVLGFYEIDGRRVKKDVS--GNIEDYMSLGKTLAEKI 287 >gi|269215203|ref|ZP_05987933.2| hydroxymethylbilane synthase [Neisseria lactamica ATCC 23970] gi|269208048|gb|EEZ74503.1| hydroxymethylbilane synthase [Neisseria lactamica ATCC 23970] Length = 326 Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 105/296 (35%), Positives = 165/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 16 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 74 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNRYARLEE 133 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L +++ RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 134 MPESAVVGTSSLRREAQLRARYPHLAIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 193 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 194 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 253 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 254 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILRADAQAPAGYADALGRAVAKKL 309 >gi|28199044|ref|NP_779358.1| porphobilinogen deaminase [Xylella fastidiosa Temecula1] gi|182681767|ref|YP_001829927.1| porphobilinogen deaminase [Xylella fastidiosa M23] gi|32129567|sp|Q87CC9|HEM3_XYLFT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238059005|sp|B2I5K8|HEM3_XYLF2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|28057142|gb|AAO29007.1| hydroxymethylbilane synthase [Xylella fastidiosa Temecula1] gi|182631877|gb|ACB92653.1| porphobilinogen deaminase [Xylella fastidiosa M23] gi|307580196|gb|ADN64165.1| porphobilinogen deaminase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 305 Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 105/293 (35%), Positives = 164/293 (55%), Gaps = 6/293 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LA+ + + L + P ++V++P+ST+GD I +R+L IGGKGLF Sbjct: 4 LRIATRKSLLAMWQSEYVAARLRML--CPDLDVVLVPMSTRGDEILDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ G+ DCAVHS KD+P L ++A L R+D D IS+ SL+ L + + Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 + TSSLRR+A L +R D+ + D RG + TRL KL+N AI+LA AG++RL E+ + Sbjct: 122 RVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNGDYDAIVLACAGLRRLGLEQRM 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L ++ P+PGQGAI +E+ + + L+ ++ T V ER L GSC Sbjct: 182 TARLAPPEWLPAPGQGAIAVESLTEDARIGTLLAGLDDLPTRKCVIAERTMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGKIFH-EVSRNGNRCDAINIGRDAAQYI 296 + +A + + G+V +DG++ E+ + D +GR AQ + Sbjct: 242 VPVGAYASYEVGGMRLQGLVGCVADGRLVRAELCSAKDEGD--MLGRAVAQCL 292 >gi|15924660|ref|NP_372194.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Mu50] gi|15927249|ref|NP_374782.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus N315] gi|148268151|ref|YP_001247094.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus JH9] gi|150394218|ref|YP_001316893.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus JH1] gi|156979988|ref|YP_001442247.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Mu3] gi|253317186|ref|ZP_04840399.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006455|ref|ZP_05145056.2| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257794056|ref|ZP_05643035.1| porphobilinogen deaminase [Staphylococcus aureus A9781] gi|258415760|ref|ZP_05682031.1| porphobilinogen deaminase [Staphylococcus aureus A9763] gi|258422003|ref|ZP_05684923.1| porphobilinogen deaminase [Staphylococcus aureus A9719] gi|258438239|ref|ZP_05689523.1| porphobilinogen deaminase [Staphylococcus aureus A9299] gi|258443697|ref|ZP_05692036.1| porphobilinogen deaminase [Staphylococcus aureus A8115] gi|258444935|ref|ZP_05693255.1| porphobilinogen deaminase [Staphylococcus aureus A6300] gi|258447989|ref|ZP_05696121.1| porphobilinogen deaminase [Staphylococcus aureus A6224] gi|258454303|ref|ZP_05702272.1| porphobilinogen deaminase [Staphylococcus aureus A5937] gi|269203288|ref|YP_003282557.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus ED98] gi|282893166|ref|ZP_06301400.1| porphobilinogen deaminase [Staphylococcus aureus A8117] gi|282929344|ref|ZP_06336911.1| porphobilinogen deaminase [Staphylococcus aureus A10102] gi|295405981|ref|ZP_06815789.1| porphobilinogen deaminase [Staphylococcus aureus A8819] gi|296274902|ref|ZP_06857409.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MR1] gi|297245093|ref|ZP_06928970.1| porphobilinogen deaminase [Staphylococcus aureus A8796] gi|54037282|sp|P64341|HEM3_STAAN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|54041349|sp|P64340|HEM3_STAAM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166217788|sp|A7X391|HEM3_STAA1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189028098|sp|A6U2D8|HEM3_STAA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189028160|sp|A5ITJ5|HEM3_STAA9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|13701467|dbj|BAB42761.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus N315] gi|14247442|dbj|BAB57832.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Mu50] gi|147741220|gb|ABQ49518.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus JH9] gi|149946670|gb|ABR52606.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus JH1] gi|156722123|dbj|BAF78540.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Mu3] gi|257788028|gb|EEV26368.1| porphobilinogen deaminase [Staphylococcus aureus A9781] gi|257839353|gb|EEV63826.1| porphobilinogen deaminase [Staphylococcus aureus A9763] gi|257842047|gb|EEV66476.1| porphobilinogen deaminase [Staphylococcus aureus A9719] gi|257848283|gb|EEV72274.1| porphobilinogen deaminase [Staphylococcus aureus A9299] gi|257851103|gb|EEV75046.1| porphobilinogen deaminase [Staphylococcus aureus A8115] gi|257856143|gb|EEV79058.1| porphobilinogen deaminase [Staphylococcus aureus A6300] gi|257858750|gb|EEV81621.1| porphobilinogen deaminase [Staphylococcus aureus A6224] gi|257863533|gb|EEV86292.1| porphobilinogen deaminase [Staphylococcus aureus A5937] gi|262075578|gb|ACY11551.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus ED98] gi|282589076|gb|EFB94177.1| porphobilinogen deaminase [Staphylococcus aureus A10102] gi|282764484|gb|EFC04610.1| porphobilinogen deaminase [Staphylococcus aureus A8117] gi|285817354|gb|ADC37841.1| Porphobilinogen deaminase [Staphylococcus aureus 04-02981] gi|294968978|gb|EFG44999.1| porphobilinogen deaminase [Staphylococcus aureus A8819] gi|297178173|gb|EFH37421.1| porphobilinogen deaminase [Staphylococcus aureus A8796] gi|312830049|emb|CBX34891.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315130698|gb|EFT86684.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus CGS03] gi|329727593|gb|EGG64049.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus 21172] Length = 308 Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 105/292 (35%), Positives = 166/292 (56%), Gaps = 6/292 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + + L V P I I + TKGDRI ++ L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQSQQFINKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L S+I Sbjct: 64 IQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPEGSII 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + ++ Sbjct: 124 GTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSDDIVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DGSC+ Sbjct: 184 SYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDGSCQV 243 Query: 247 AIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 IAG+A + F G+++ DGK E + NG D + +G+ + ++ Sbjct: 244 PIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKTVSNKLK 293 >gi|83815900|ref|YP_445675.1| porphobilinogen deaminase [Salinibacter ruber DSM 13855] gi|83757294|gb|ABC45407.1| porphobilinogen deaminase [Salinibacter ruber DSM 13855] Length = 323 Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 103/308 (33%), Positives = 169/308 (54%), Gaps = 13/308 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +GTR S LAL A RS L + H + + ++T+GD T+ ++EIG + +F Sbjct: 6 PLVLGTRGSELALRQANVVRSRL----EAAGHRVELETITTRGDEATDTPISEIGDEAVF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSLKDLA 122 T+E+++ L+ G +D AVHS KD+P+ + GL ++A RED RD F++H + L DL Sbjct: 62 TKELDRALLQGGVDLAVHSLKDIPSTVPSGLALAAIGEREDPRDAFVAHPSFDGHLHDLP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + + T+SLRR A LL WRSD+ V+ RG ++TRL KL + ++LA AG+ RL Sbjct: 122 EGATVATASLRRTAQLLTWRSDLEVVPVRGNVDTRLEKLGESDWTGMVLAVAGLVRLGLS 181 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELD 241 I++ ++ P+ GQGA+ I + ++L++ ++H + + N ERAFL ++ Sbjct: 182 LHIRDRIDPSLIVPAVGQGALGIACREDQDALRDLLRETLHHAPSGHAANAERAFLKKVG 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIRF 298 G C+ + +A+ TL + A DG E R+ RC D +GR A + Sbjct: 242 GGCQVPLGAWAHIDDGTLVLDACIAALDGS---EHYRDERRCAPEDGAAVGRKLAADLLA 298 Query: 299 ISNKNVFN 306 + ++ + Sbjct: 299 MGGDHILD 306 >gi|57650542|ref|YP_186555.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus COL] gi|87160322|ref|YP_494312.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195475|ref|YP_500279.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221776|ref|YP_001332598.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus str. Newman] gi|161509889|ref|YP_001575548.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142579|ref|ZP_03567072.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253732321|ref|ZP_04866486.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253734545|ref|ZP_04868710.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus TCH130] gi|258451815|ref|ZP_05699837.1| porphobilinogen deaminase [Staphylococcus aureus A5948] gi|262048646|ref|ZP_06021529.1| porphobilinogen deaminase [Staphylococcus aureus D30] gi|262052244|ref|ZP_06024449.1| porphobilinogen deaminase [Staphylococcus aureus 930918-3] gi|282920211|ref|ZP_06327936.1| porphobilinogen deaminase [Staphylococcus aureus A9765] gi|284024719|ref|ZP_06379117.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 132] gi|294848692|ref|ZP_06789438.1| porphobilinogen deaminase [Staphylococcus aureus A9754] gi|304380738|ref|ZP_07363407.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|11386773|sp|O34090|HEM3_STAA8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|71152114|sp|Q5HFA2|HEM3_STAAC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123749605|sp|Q2FG66|HEM3_STAA3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|172048933|sp|A6QHK4|HEM3_STAAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189028161|sp|A8Z2J1|HEM3_STAAT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|2589181|gb|AAC45833.1| porphobilinogen deaminase [Staphylococcus aureus] gi|57284728|gb|AAW36822.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus COL] gi|87126296|gb|ABD20810.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203033|gb|ABD30843.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374576|dbj|BAF67836.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus str. Newman] gi|160368698|gb|ABX29669.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253723959|gb|EES92688.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253727486|gb|EES96215.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus TCH130] gi|257860527|gb|EEV83353.1| porphobilinogen deaminase [Staphylococcus aureus A5948] gi|259159845|gb|EEW44884.1| porphobilinogen deaminase [Staphylococcus aureus 930918-3] gi|259163293|gb|EEW47852.1| porphobilinogen deaminase [Staphylococcus aureus D30] gi|269941151|emb|CBI49538.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus TW20] gi|282594559|gb|EFB99544.1| porphobilinogen deaminase [Staphylococcus aureus A9765] gi|294824718|gb|EFG41141.1| porphobilinogen deaminase [Staphylococcus aureus A9754] gi|302751497|gb|ADL65674.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340737|gb|EFM06668.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315198635|gb|EFU28963.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus CGS01] gi|320140451|gb|EFW32305.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MRSA131] gi|320143989|gb|EFW35758.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MRSA177] gi|329314344|gb|AEB88757.1| Porphobilinogen deaminase [Staphylococcus aureus subsp. aureus T0131] gi|329728357|gb|EGG64794.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus 21189] gi|329733184|gb|EGG69521.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus 21193] Length = 308 Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 105/292 (35%), Positives = 165/292 (56%), Gaps = 6/292 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L S+I Sbjct: 64 IQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPEGSII 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + ++ Sbjct: 124 GTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSDDIVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DGSC+ Sbjct: 184 SYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDGSCQV 243 Query: 247 AIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 IAG+A + F G+++ DGK E + NG D + +G+ + ++ Sbjct: 244 PIAGYATISDQNEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKTVSNKLK 293 >gi|229098938|ref|ZP_04229873.1| Porphobilinogen deaminase [Bacillus cereus Rock3-29] gi|228684436|gb|EEL38379.1| Porphobilinogen deaminase [Bacillus cereus Rock3-29] Length = 309 Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 111/270 (41%), Positives = 155/270 (57%), Gaps = 8/270 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L+ EID AVHS KDMP L +GL I R D RD FIS + +S KDLA + Sbjct: 62 KEIEHALLMKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGESFKDLAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECRKDDNDLLQLLSHMNDAVTERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIF 273 + IAG+A K + +V + DG + Sbjct: 242 QVPIAGYATLTKDDAIELTALVGSMDGSVL 271 >gi|325129681|gb|EGC52495.1| porphobilinogen deaminase [Neisseria meningitidis OX99.30304] gi|325203630|gb|ADY99083.1| porphobilinogen deaminase [Neisseria meningitidis M01-240355] Length = 311 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 103/296 (34%), Positives = 166/296 (56%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKL 294 >gi|319779685|ref|YP_004130598.1| Porphobilinogen deaminase [Taylorella equigenitalis MCE9] gi|317109709|gb|ADU92455.1| Porphobilinogen deaminase [Taylorella equigenitalis MCE9] Length = 313 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 101/267 (37%), Positives = 157/267 (58%), Gaps = 2/267 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RI TR S LA+ A + L + P N+ + ++TKGD+I ++TL++IGGKGL Sbjct: 6 KNLRIATRESRLAVWQAEFVQKKLKSI--FPHLNVELHKMTTKGDQILDKTLSKIGGKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+SG D AVHS KD+P +L +I+ L RE+ D F+S+ ++ KDL Sbjct: 64 FIKELESSLLSGVTDLAVHSLKDVPVELNDEFEIACILERENPMDAFVSNEYKTFKDLPE 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR++ + + V RG ++TRL KL++ + AI+LA AG+KRL Sbjct: 124 GAIVGTSSLRRESQIRAKFPHLVVKPLRGNLDTRLKKLDDGQYSAIILAAAGLKRLNMMD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 IK ++I+D P+ GQGA+ IE + +E++ ++HE+T+ V+ ER L GS Sbjct: 184 RIKSFVSIDDSLPAVGQGALAIEILKDKFALKEMLSYLHHEETFKCVSAERIVSQYLGGS 243 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG 270 C+ +A A +V + DG Sbjct: 244 CQVPLAAHACVINDLFQVRALVASPDG 270 >gi|283470938|emb|CAQ50149.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus ST398] Length = 308 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 105/292 (35%), Positives = 165/292 (56%), Gaps = 6/292 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L S+I Sbjct: 64 IQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPEGSII 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + ++ Sbjct: 124 GTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSDDIVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DGSC+ Sbjct: 184 SYLDRDTLLPAIGQGALGIECRSDDDELLSLLSKVHNDEVAKCVTAERTFLAEMDGSCQV 243 Query: 247 AIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 IAG+A + F G+++ DGK E + NG D + +G+ + ++ Sbjct: 244 PIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKTVSNKLK 293 >gi|115352519|ref|YP_774358.1| porphobilinogen deaminase [Burkholderia ambifaria AMMD] gi|122322497|sp|Q0BCU9|HEM3_BURCM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|115282507|gb|ABI88024.1| porphobilinogen deaminase [Burkholderia ambifaria AMMD] Length = 328 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 109/304 (35%), Positives = 167/304 (54%), Gaps = 5/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 14 LTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFV 71 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L + Sbjct: 72 KELENALADGRADLAVHSLKDVPMALPDGFALTAIMEREDPRDAFVSNDYASLDALPAGA 131 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E I Sbjct: 132 VVGTSSLRREAMLRARYPHLDVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARI 191 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++++ED PP+ GQGA+ IE + + ++ T +V ER L GSC+ Sbjct: 192 RTLIDVEDSPPAAGQGALGIEIATHRTDVAAWLAPLHDPRTALAVEAERMVSRALGGSCE 251 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNK 302 +A A + LY G V +DG+ G DA+ +GR + + Sbjct: 252 VPLAAHAVWRAGELYLTGRVSTTDGQRVLTAEECGAVMTVADALALGRAVSDELEAQGAL 311 Query: 303 NVFN 306 ++ N Sbjct: 312 DIVN 315 >gi|152976881|ref|YP_001376398.1| porphobilinogen deaminase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189042874|sp|A7GTE5|HEM3_BACCN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|152025633|gb|ABS23403.1| porphobilinogen deaminase [Bacillus cytotoxicus NVH 391-98] Length = 309 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 113/291 (38%), Positives = 163/291 (56%), Gaps = 6/291 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL L + P+ + + TKGD I + TL+++GGKGLF +E Sbjct: 6 VGSRKSKLALTQTNWFIDQLQALG--LPYEFEVKEIVTKGDVILDVTLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE L++ EID AVHS KDMP L GL I R D RD FIS +S K+LA + + Sbjct: 64 IEHALLTKEIDMAVHSMKDMPAVLPAGLTIGCIPKRVDPRDAFISKNGKSFKELAKGATL 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-VIK 186 GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG+KR+ + VI Sbjct: 124 GTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLQEENYDAIILATAGLKRMGWDNDVIT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C+ Sbjct: 184 EHLDESLCVPAVGQGALAIECREDDKDLLQLLAHMNDAATERTVAAERVFLHKLEGGCQV 243 Query: 247 AIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 IAG+A + + + +V ++DG + + + G + +G +AA+ + Sbjct: 244 PIAGYATLQENGKIKLHALVGSTDGSVLLKETVVGTNPE--TVGLEAAERL 292 >gi|49483913|ref|YP_041137.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MRSA252] gi|257425786|ref|ZP_05602210.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 55/2053] gi|257428452|ref|ZP_05604850.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 65-1322] gi|257431086|ref|ZP_05607463.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 68-397] gi|257433769|ref|ZP_05610127.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus E1410] gi|257436685|ref|ZP_05612729.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus M876] gi|282904242|ref|ZP_06312130.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus C160] gi|282906067|ref|ZP_06313922.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Btn1260] gi|282908982|ref|ZP_06316800.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911298|ref|ZP_06319100.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus WBG10049] gi|282914467|ref|ZP_06322253.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus M899] gi|282919436|ref|ZP_06327171.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus C427] gi|282924813|ref|ZP_06332479.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus C101] gi|283958422|ref|ZP_06375873.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus A017934/97] gi|293503545|ref|ZP_06667392.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 58-424] gi|293510560|ref|ZP_06669265.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus M809] gi|293537102|ref|ZP_06671782.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus M1015] gi|295428242|ref|ZP_06820871.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590795|ref|ZP_06949433.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus MN8] gi|55976402|sp|Q6GG35|HEM3_STAAR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|49242042|emb|CAG40741.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MRSA252] gi|257271480|gb|EEV03626.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 55/2053] gi|257275293|gb|EEV06780.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 65-1322] gi|257278034|gb|EEV08682.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 68-397] gi|257281862|gb|EEV11999.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus E1410] gi|257284036|gb|EEV14159.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus M876] gi|282313179|gb|EFB43575.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus C101] gi|282317246|gb|EFB47620.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus C427] gi|282321648|gb|EFB51973.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus M899] gi|282324993|gb|EFB55303.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus WBG10049] gi|282327246|gb|EFB57541.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331359|gb|EFB60873.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Btn1260] gi|282595860|gb|EFC00824.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus C160] gi|283790571|gb|EFC29388.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus A017934/97] gi|290919947|gb|EFD97015.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus M1015] gi|291095211|gb|EFE25476.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 58-424] gi|291466451|gb|EFF08972.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus M809] gi|295127642|gb|EFG57279.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575681|gb|EFH94397.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus MN8] gi|298694941|gb|ADI98163.1| Porphobilinogen deaminase [Staphylococcus aureus subsp. aureus ED133] gi|312437871|gb|ADQ76942.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus TCH60] gi|315195573|gb|EFU25960.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus CGS00] Length = 308 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 105/292 (35%), Positives = 165/292 (56%), Gaps = 6/292 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L S+I Sbjct: 64 IQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPEGSII 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + ++ Sbjct: 124 GTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSDDIVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DGSC+ Sbjct: 184 SYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDGSCQV 243 Query: 247 AIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 IAG+A + F G+++ DGK E + NG D + +G+ + ++ Sbjct: 244 PIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKKVSNKLK 293 >gi|254247511|ref|ZP_04940832.1| Porphobilinogen deaminase [Burkholderia cenocepacia PC184] gi|124872287|gb|EAY64003.1| Porphobilinogen deaminase [Burkholderia cenocepacia PC184] Length = 334 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 109/288 (37%), Positives = 161/288 (55%), Gaps = 5/288 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 19 LTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFV 76 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L + Sbjct: 77 KELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAGA 136 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E I Sbjct: 137 VVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARI 196 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC+ Sbjct: 197 RALLDVEASPPAAGQGALGIEIAAHRDDVAAWLASLHDPQTALAVEAERMVSRALGGSCE 256 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGR 290 +A A + LY G V +DGK G DA+ +GR Sbjct: 257 VPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGR 304 >gi|255526355|ref|ZP_05393269.1| porphobilinogen deaminase [Clostridium carboxidivorans P7] gi|255509932|gb|EET86258.1| porphobilinogen deaminase [Clostridium carboxidivorans P7] Length = 290 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 159/291 (54%), Gaps = 6/291 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +I TR S LA L + H + +++ T GD+I + +L++IGGKGLF Sbjct: 3 LKIATRRSQLAQVQTETIMKILKENHNVEAEKLLV---ETTGDKILDVSLSKIGGKGLFI 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L+ + D AVHS KD+P + I + PRED+RD F+S K+L + Sbjct: 60 KEIEVALLEDKADAAVHSMKDVPFDVPDMFDIVSIPPREDVRDAFVSMNGVHFKELKKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A + R D+ ++ RG ++TR++K+ I+LA AG+KR+ E +I Sbjct: 120 KIGTSSNRRAAQVKLLRPDLEIVPIRGNVQTRISKIEKENLDGIILAAAGLKRMNMENII 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ + P+ GQGA+ IET N+ +++ K + E+T V ER+F+ L+G C Sbjct: 180 TDYFDVNEMVPAVGQGALGIETKKNSVN-EDIFKKMEDENTRICVEAERSFMRTLNGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 S I +A +T+ GI D I +++ GN+ D + +G A+ I Sbjct: 239 STIGAYAQINENTISIIGIFQVGDNLIKRDIA--GNKEDYMELGYKLAKKI 287 >gi|91789512|ref|YP_550464.1| porphobilinogen deaminase [Polaromonas sp. JS666] gi|91698737|gb|ABE45566.1| porphobilinogen deaminase [Polaromonas sp. JS666] Length = 334 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 108/300 (36%), Positives = 158/300 (52%), Gaps = 12/300 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A ++ L + ++ ++T+GD+I +R+L+++GGKGLF +E Sbjct: 18 IATRESRLALWQAEHVKALLESRLG---WQVELLGMTTQGDQILDRSLSKVGGKGLFVKE 74 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L G ++ L RED D F+S+ SL DL +V+ Sbjct: 75 LEVALSEGRADLAVHSLKDVPMDLPDGFALACVLEREDPHDAFVSNQFASLADLPQGAVV 134 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR LL R D+++ RG ++TRL KL+ HAI+LA AG+KRL + I+ Sbjct: 135 GTSSLRRLVLLKALRPDLNIEPLRGNLDTRLRKLDEGHYHAIVLAAAGLKRLGLQARIRG 194 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 I +D P+ GQGA+ IE + + + + H+ TW +V ER + GSC Sbjct: 195 IFAPDDMLPAAGQGALGIEVRADRHDLMQALGTLAHQPTWLAVTAERTVSRAMGGSCSMP 254 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307 +A AY +G S+G H + DA G+ A +R V +F Sbjct: 255 LA--AYTEGPAAE------GSEGMQLHATWGDPATADA-PAGQPLAPLVRVQKTAVVRSF 305 >gi|77967966|gb|ABB09346.1| Porphobilinogen deaminase [Burkholderia sp. 383] Length = 378 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 109/286 (38%), Positives = 162/286 (56%), Gaps = 5/286 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 65 IASRESRLAMWQAEHVRDALRKLY--PACDVNILGMTTRGDQILDRTLSKVGGKGLFVKE 122 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+ Sbjct: 123 LEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAGAVV 182 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E I+ Sbjct: 183 GTSSLRREAMLRSRYPHLEVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLETRIRA 242 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC+ Sbjct: 243 LLDVEASPPAAGQGALGIEIASHRSDVAAWLAPLHDPQTALAVEAERMVSRALGGSCEVP 302 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGR 290 +A A + LY G V +DGK G DA+ +GR Sbjct: 303 LAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGR 348 >gi|21283343|ref|NP_646431.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MW2] gi|49486497|ref|YP_043718.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MSSA476] gi|297207616|ref|ZP_06924051.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911698|ref|ZP_07129142.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus TCH70] gi|23821677|sp|Q8NW74|HEM3_STAAW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|55976400|sp|Q6G8Q5|HEM3_STAAS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|21204783|dbj|BAB95479.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MW2] gi|49244940|emb|CAG43401.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MSSA476] gi|296887633|gb|EFH26531.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300887119|gb|EFK82320.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus TCH70] gi|323440785|gb|EGA98494.1| porphobilinogen deaminase [Staphylococcus aureus O11] gi|323442940|gb|EGB00563.1| porphobilinogen deaminase [Staphylococcus aureus O46] Length = 308 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 105/292 (35%), Positives = 165/292 (56%), Gaps = 6/292 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L S+I Sbjct: 64 IQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPEGSII 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + ++ Sbjct: 124 GTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSDDIVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DGSC+ Sbjct: 184 SYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDGSCQV 243 Query: 247 AIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 IAG+A + F G+++ DGK E + NG D + +G+ + ++ Sbjct: 244 PIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKTVSNKLK 293 >gi|49478646|ref|YP_038514.1| porphobilinogen deaminase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|55976410|sp|Q6HD62|HEM3_BACHK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|49330202|gb|AAT60848.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 309 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 116/293 (39%), Positives = 165/293 (56%), Gaps = 10/293 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + IAG+A + + +V + DG I + + G D +G +AA + Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSILLKETVVGT--DPEKVGLEAADRL 292 >gi|296136292|ref|YP_003643534.1| porphobilinogen deaminase [Thiomonas intermedia K12] gi|294340528|emb|CAZ88912.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Thiomonas sp. 3As] gi|295796414|gb|ADG31204.1| porphobilinogen deaminase [Thiomonas intermedia K12] Length = 317 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 102/293 (34%), Positives = 159/293 (54%), Gaps = 5/293 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A R L ++ P ++ I ++T+GD+I +++L +IGGKGLF +E Sbjct: 13 IATRESRLALWQAEHVRDLLKGLY--PQCDVRIFGMTTQGDQILDKSLAKIGGKGLFVKE 70 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E + G D AVHS KD+P L G ++A + RED RD ++S +L DL +V+ Sbjct: 71 LEVAMEQGHADLAVHSLKDVPMVLPTGFALTAVMEREDPRDAWVSPHYANLADLPAGAVV 130 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR++ L + V RG ++TRL KL+ + ILLA AG+KRL + ++ Sbjct: 131 GTSSLRRESQLRARYPHLKVQALRGNLDTRLRKLDEGQYAGILLAAAGLKRLGLGERVRA 190 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 ++ ED P+ GQ A+ IE + P + + +NH T + ERA L GSC + Sbjct: 191 VIEPEDMLPAVGQAALGIEIRADRPDLAQALAALNHPPTALCTHAERAVSRGLGGSCTTP 250 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIR 297 + +A +G ++ ++ DG + G D A +G+ A+ +R Sbjct: 251 MGAYATLEGEAMHLRAVLGLPDGSQALHAQQRGRVTDLAQAEALGQQVARQLR 303 >gi|320101752|ref|YP_004177343.1| hydroxymethylbilane synthase [Isosphaera pallida ATCC 43644] gi|319749034|gb|ADV60794.1| hydroxymethylbilane synthase [Isosphaera pallida ATCC 43644] Length = 332 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 106/293 (36%), Positives = 154/293 (52%), Gaps = 3/293 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLA A + L D P + ++ + T GDR N L IGG GLFT Sbjct: 19 VRIGTRGSPLARWQAEWVAARLRDAW--PGLTVELVEIKTLGDRDRNSPLASIGGAGLFT 76 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EI++ L+ ++ AVHS KD+PT+ ++GL + A PRE+ RD I+ L+ L + Sbjct: 77 KEIQRALLDCRVEIAVHSLKDLPTQPVEGLILGAVPPREEPRDALIAPAHGLLEHLPAAA 136 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT SLRR+A LL R D+ V+ RG +ETRLN + A+LLA AG++RL + I Sbjct: 137 RVGTGSLRRRAQLLWMRPDLEVVGVRGNVETRLNHALEGRLDAVLLAVAGLRRLGLDSAI 196 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L DF P+ GQGA+ IE ++P L+ ++ + SV ERA LA+L+ C Sbjct: 197 TQTLGPPDFLPAVGQGALGIECRGDDPDTLALLAPLDDPASRASVLAERALLADLEAGCM 256 Query: 246 SAIAGFAYCKGSTLY-FYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + + + L VL G+ +G D +G A +R Sbjct: 257 VPLGAWGRSEADGLLALDAAVLDPAGRQRLAAHASGPANDPQTLGLAVAAELR 309 >gi|68171155|ref|ZP_00544563.1| Porphobilinogen deaminase [Ehrlichia chaffeensis str. Sapulpa] gi|88657743|ref|YP_507506.1| porphobilinogen deaminase [Ehrlichia chaffeensis str. Arkansas] gi|123722778|sp|Q2GGC7|HEM3_EHRCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|67999425|gb|EAM86066.1| Porphobilinogen deaminase [Ehrlichia chaffeensis str. Sapulpa] gi|88599200|gb|ABD44669.1| porphobilinogen deaminase [Ehrlichia chaffeensis str. Arkansas] Length = 298 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 111/290 (38%), Positives = 162/290 (55%), Gaps = 9/290 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+A E ++ L P ++ I+ + T GD L+ IGGK LF Sbjct: 3 IRIGTRGSILAIAQTLEIKNLLN--RYFPEISVQIVKIKTSGDINNQVPLSAIGGKSLFI 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G++D AVHS KD+P +GL I L R DVFIS + +K L L++ Sbjct: 61 KEIEEALLMGKVDLAVHSVKDIPAFYCEGLIIPCVLKRNSPYDVFISSKHKDIKSLPLNA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS+RRK L R D+ V+ RG I+TR+ K N + I+LA AG+ R+ + VI Sbjct: 121 TIGTSSVRRKVQLNYLRPDLQVVPVRGNIDTRILKANVGEFDGIVLAEAGLIRINRCDVI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 KEIL+ + + GQGAI I+ V++ +KV+N ++ V ER+FL ++GSC Sbjct: 181 KEILSPKIMLSAVGQGAIGIQCRVDDHSIINKIKVLNCHQSYVCVMAERSFLKTINGSCD 240 Query: 246 SAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA----INIGR 290 + +A A Y T++ ++ +F S N CDA IN+G+ Sbjct: 241 TPLAALAQYVNNDTIHMSCMLANEKNMVF--ASCCFNECDAEKSGINMGK 288 >gi|282916930|ref|ZP_06324688.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus D139] gi|283770735|ref|ZP_06343627.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus H19] gi|282319417|gb|EFB49769.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus D139] gi|283460882|gb|EFC07972.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus H19] Length = 308 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 105/292 (35%), Positives = 165/292 (56%), Gaps = 6/292 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L S+I Sbjct: 64 IQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPEGSII 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + ++ Sbjct: 124 GTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSDDIVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DGSC+ Sbjct: 184 SYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDGSCQV 243 Query: 247 AIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 IAG+A + F G+++ DGK E + NG D + +G+ + ++ Sbjct: 244 PIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKKVSNKLK 293 >gi|161702955|ref|YP_369990.2| porphobilinogen deaminase [Burkholderia sp. 383] Length = 334 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 109/288 (37%), Positives = 162/288 (56%), Gaps = 5/288 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 19 LTIASRESRLAMWQAEHVRDALRKLY--PACDVNILGMTTRGDQILDRTLSKVGGKGLFV 76 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L + Sbjct: 77 KELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAGA 136 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E I Sbjct: 137 VVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLETRI 196 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC+ Sbjct: 197 RALLDVEASPPAAGQGALGIEIASHRSDVAAWLAPLHDPQTALAVEAERMVSRALGGSCE 256 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGR 290 +A A + LY G V +DGK G DA+ +GR Sbjct: 257 VPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGR 304 >gi|332975659|gb|EGK12548.1| porphobilinogen deaminase [Psychrobacter sp. 1501(2011)] Length = 339 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 100/278 (35%), Positives = 158/278 (56%), Gaps = 13/278 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR SPLA+ A +S L ++ P + ++ + T+GD+I + L +IGGKGL Sbjct: 11 KTLNIATRKSPLAMWQAEHIKSRLESLY--PELEVNLVTMVTQGDKILDTPLAKIGGKGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ L G D AVHS KD+P +L +GL + Y RE D F+S+ L+DL Sbjct: 69 FVKELEQALYDGRADIAVHSLKDVPMQLPEGLILGTYCKRETPTDAFVSNNYDKLEDLPE 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GT+SLRR+ + +R D+ + RG ++TRL+KL+ + AI+LA +G+KR++ + Sbjct: 129 GAVVGTASLRRQCQIKAFRPDLQIKSLRGNVQTRLSKLDAGEYDAIILATSGLKRVELSE 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 IK+ ++I+ P+ GQGA+ IE ++ EL+K +N + ERA L+G Sbjct: 189 RIKQEIDIDISLPAVGQGALAIECRSDDEAVLELLKPLNDGQARIRLKAERALNRRLEGG 248 Query: 244 CKSAIAGFAYCKGS-----------TLYFYGIVLASDG 270 C+ IA +A + TL+ G V + DG Sbjct: 249 CQVPIAAYAVIEKDSEPSDQQIFQKTLWLRGRVGSEDG 286 >gi|170733765|ref|YP_001765712.1| porphobilinogen deaminase [Burkholderia cenocepacia MC0-3] gi|238058731|sp|B1JWR0|HEM3_BURCC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|169817007|gb|ACA91590.1| porphobilinogen deaminase [Burkholderia cenocepacia MC0-3] Length = 334 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 109/288 (37%), Positives = 161/288 (55%), Gaps = 5/288 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 19 LTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFV 76 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L + Sbjct: 77 KELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAGA 136 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E I Sbjct: 137 VVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARI 196 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC+ Sbjct: 197 RALLDVEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPQTALAVEAERMVSRALGGSCE 256 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGR 290 +A A + LY G V +DGK G DA+ +GR Sbjct: 257 VPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGR 304 >gi|134296607|ref|YP_001120342.1| porphobilinogen deaminase [Burkholderia vietnamiensis G4] gi|166201499|sp|A4JGV4|HEM3_BURVG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|134139764|gb|ABO55507.1| porphobilinogen deaminase [Burkholderia vietnamiensis G4] Length = 333 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 108/302 (35%), Positives = 169/302 (55%), Gaps = 5/302 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 21 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 78 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+ Sbjct: 79 LENALADGRADLAVHSLKDVPMALPDGFALAAIMAREDARDAFVSNDYASLDALPAGAVV 138 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L ++V+ RG ++TRL KL+ AI+LA AG+KRL E I+ Sbjct: 139 GTSSLRREAMLRARYPHLNVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARIRA 198 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 ++++ED P+ GQGA+ IE + + + ++ T +V ER L GSC+ Sbjct: 199 LIDVEDSLPAAGQGALGIEIAAHRSDVAQWLAPLHDPHTALAVEAERMVSRALGGSCEVP 258 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNKNV 304 +A A + LY G V +DG+ G DA+ +GR + + +++ Sbjct: 259 LAAHAVWRAGELYLTGRVSTTDGRRVLSAQACGAVMTAADALALGRAVSDELDAQGARDI 318 Query: 305 FN 306 N Sbjct: 319 VN 320 >gi|189184545|ref|YP_001938330.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Ikeda] gi|238054423|sp|B3CUP9|HEM3_ORITI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189181316|dbj|BAG41096.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Ikeda] Length = 298 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 101/253 (39%), Positives = 152/253 (60%), Gaps = 4/253 (1%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 R+G+R S LAL A ++ + ++ + N +IIP+ T GD I N+ L +IGGKGLF + Sbjct: 4 RVGSRASRLALIQA---QAVVQKINDLLGLNAIIIPIKTTGDLIQNKNLYDIGGKGLFLK 60 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE L++ ID AVHS KD+P L GLQ++A L R ++ D+ +S A + DL L + Sbjct: 61 EIEYALLNNTIDIAVHSLKDVPAYLPDGLQLAAVLERGNVGDMLVSKIANKITDLPLGAR 120 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-I 185 +GTSS+RR+ LLR R D++++ FRG ++TR NK+ NN+ A +LA AG++RL + Sbjct: 121 VGTSSVRRRIQLLRLRPDLNIVLFRGNVDTRWNKIFNNEVDATVLAAAGLQRLNYDTSRF 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 I++ ++ P+ GQG I IE ++ L INH+ TW + ER +L L+ C Sbjct: 181 CNIISQDEMLPAIGQGVIAIEARKDDKLIMPLCAKINHQLTWQLIQVERGYLKTLNADCN 240 Query: 246 SAIAGFAYCKGST 258 I G A G+ Sbjct: 241 VPIGGLANYIGNN 253 >gi|162218053|ref|YP_621689.2| porphobilinogen deaminase [Burkholderia cenocepacia AU 1054] Length = 334 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 109/288 (37%), Positives = 161/288 (55%), Gaps = 5/288 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 19 LTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFV 76 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L + Sbjct: 77 KELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAGA 136 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E I Sbjct: 137 VVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARI 196 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC+ Sbjct: 197 RALLDVEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPQTALAVEAERMVSRALGGSCE 256 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGR 290 +A A + LY G V +DGK G DA+ +GR Sbjct: 257 VPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGR 304 >gi|325141763|gb|EGC64215.1| porphobilinogen deaminase [Neisseria meningitidis 961-5945] gi|325197751|gb|ADY93207.1| porphobilinogen deaminase [Neisseria meningitidis G2136] Length = 311 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 104/296 (35%), Positives = 165/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKL 294 >gi|188585750|ref|YP_001917295.1| porphobilinogen deaminase [Natranaerobius thermophilus JW/NM-WN-LF] gi|229836110|sp|B2A1G7|HEM3_NATTJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|179350437|gb|ACB84707.1| porphobilinogen deaminase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 311 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 102/267 (38%), Positives = 154/267 (57%), Gaps = 3/267 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL L + P I I + TKGD++ N +L+++GGKGLF Sbjct: 3 LRIGTRRSQLALDQTNWVVEQLKTHY--PDIEIEIKKIETKGDQLLNVSLSKVGGKGLFL 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EI+ L+ GEID AVHS KD+PT+ + L+I A R D D IS+ ++ +L ++ Sbjct: 61 KEIQNALLQGEIDLAVHSMKDIPTETTEDLEICAITKRVDPLDALISNNDITIDELPENA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKV 184 IGTSSLRR + L +R+D+ +I RG I TR+NKL + A++LA AG+ R Sbjct: 121 KIGTSSLRRGSQLKAYRNDLQIIPIRGNINTRMNKLQELPELDAVVLAKAGLVRSGMTDS 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + ++ E P PGQGA+ +E +N +E + V++ ++ ++ ERAFL L GSC Sbjct: 181 ISQNISPEIIVPCPGQGALGLEIRHDNENLKEKLAVLDDSESRKAIGAERAFLNRLGGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGK 271 + +A + L+ G+V + DG+ Sbjct: 241 HVPVGAYAEIISNELHLTGVVASEDGQ 267 >gi|218899632|ref|YP_002448043.1| porphobilinogen deaminase [Bacillus cereus G9842] gi|228967567|ref|ZP_04128593.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar sotto str. T04001] gi|226740628|sp|B7IIX5|HEM3_BACC2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|218545857|gb|ACK98251.1| porphobilinogen deaminase [Bacillus cereus G9842] gi|228792146|gb|EEM39722.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar sotto str. T04001] Length = 309 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 112/285 (39%), Positives = 161/285 (56%), Gaps = 8/285 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDAITERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 + IAG+A K T+ +V + DG + + + G + + + Sbjct: 242 QVPIAGYATLKENDTIELTALVGSMDGSVLLKETVVGTNPEEVGL 286 >gi|88607872|ref|YP_505325.1| porphobilinogen deaminase [Anaplasma phagocytophilum HZ] gi|88598935|gb|ABD44405.1| porphobilinogen deaminase [Anaplasma phagocytophilum HZ] Length = 304 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 102/272 (37%), Positives = 156/272 (57%), Gaps = 4/272 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+ A ++++ + + II + T GD T+ L +IGGKGLF Sbjct: 7 IRIGTRGSLLAMQQARIVKTAIETNY--AELSTRIITIKTSGDMNTHVPLYDIGGKGLFI 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ ID AVHSAKD+P + L I LPR D F+S S+ L L++ Sbjct: 65 KEIEEALLDNIIDVAVHSAKDVPGIYSEDLDIPCILPRASALDAFLSSKYDSIASLPLNA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS+RRK LL R D+ +I RG +ETR++K+ + I+LA AG+ R+ K+ +I Sbjct: 125 KIGTSSVRRKVQLLTMRPDLEIIPMRGNVETRISKMQMGECDGIVLAEAGLYRVSKDNLI 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L E + GQGAIC++ + + E++K +N ++ +V+ ER+F+ +DGSC Sbjct: 185 SEVLQPEVMLGAVGQGAICVQCRRYDRRILEILKKLNCHKSYTTVSAERSFMRAVDGSCN 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK--IFHE 275 + +A A + +LA D + +F E Sbjct: 245 TPLAAMAKYIDMDILTMKCMLADDARNMVFTE 276 >gi|52141043|ref|YP_085787.1| porphobilinogen deaminase [Bacillus cereus E33L] gi|61213349|sp|Q633Y0|HEM3_BACCZ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|51974512|gb|AAU16062.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Bacillus cereus E33L] Length = 309 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 115/293 (39%), Positives = 165/293 (56%), Gaps = 10/293 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRL 292 >gi|317123819|ref|YP_004097931.1| hydroxymethylbilane synthase [Intrasporangium calvum DSM 43043] gi|315587907|gb|ADU47204.1| hydroxymethylbilane synthase [Intrasporangium calvum DSM 43043] Length = 316 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 101/295 (34%), Positives = 154/295 (52%), Gaps = 9/295 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + + D + H++ ++ ++T+GD ++ LT IGG G+F Sbjct: 4 LRLGTRRSALATTQS----GWVADQLRAAGHDVELVEITTEGD-VSGGLLTAIGGTGVFA 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 I K L G +D AVHS KD+PT GL ++A RED RDV ++ +L +L + S Sbjct: 59 AAIRKALTDGRVDVAVHSLKDLPTAPEPGLVVAAVPAREDSRDVLVARDGLTLGELPIGS 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GT S RR A L + + RG ++TRL +++ + A++LA AG+ RL + V+ Sbjct: 119 VVGTGSPRRTAQLAALGLGLEIRPIRGNVDTRLRLVSSGEVDAVILARAGLARLGRLDVV 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L+ P+PGQGA+ +E + P E V V+ DT S+ ERA LA L+ C Sbjct: 179 TEVLDPIQVLPAPGQGALAVECRADRPDVLEAVSVLEDADTRASITAERALLAALEAGCT 238 Query: 246 SAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A +G L DG+I S G D ++GR AQ + Sbjct: 239 APVGALAEVVDGEEGLELSLRAFAGTEDGRIDLRRSLTGRYDDPESLGRRLAQIL 293 >gi|325135871|gb|EGC58483.1| porphobilinogen deaminase [Neisseria meningitidis M0579] gi|325207582|gb|ADZ03034.1| porphobilinogen deaminase [Neisseria meningitidis NZ-05/33] Length = 311 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 103/296 (34%), Positives = 166/296 (56%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKL 294 >gi|307154737|ref|YP_003890121.1| porphobilinogen deaminase [Cyanothece sp. PCC 7822] gi|306984965|gb|ADN16846.1| porphobilinogen deaminase [Cyanothece sp. PCC 7822] Length = 320 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 111/297 (37%), Positives = 161/297 (54%), Gaps = 5/297 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + + L + P + +ST+GD+I + L +IG KGL Sbjct: 8 RTVRIGSRKSQLALVQTYWVQGELQKHY--PDRQFDVETMSTQGDKILDVALAKIGDKGL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120 FT+E+E +I +ID AVHS KD+PT L GL + R D D + H + L Sbjct: 66 FTKELEVGMIDHQIDLAVHSLKDLPTNLPSGLILGCVTERVDPADGLVVNEKHKDKQLDT 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSSLRR A L ++ D RG + TRL+KL+ + AI+LA AG+ RL Sbjct: 126 LPEGAVIGTSSLRRLAQLRHHFPHLTFKDVRGNVNTRLSKLDAGEYDAIILAVAGLTRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +I+ E + GQGA+ IE ++ + +L+KV+ H+ T D ERAFL EL Sbjct: 186 MSDRIHQIIPSEISLHAVGQGALGIECRADDVEVLDLLKVLEHQATRDRCYAERAFLREL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +G C+ I +G TL G+V + DG+ + S G DA +G++ A +R Sbjct: 246 EGGCQVPIGVNTSVEGDTLTLTGMVASLDGQKLIKDSITGKASDADQLGQELAIRMR 302 >gi|120610679|ref|YP_970357.1| porphobilinogen deaminase [Acidovorax citrulli AAC00-1] gi|120589143|gb|ABM32583.1| porphobilinogen deaminase [Acidovorax citrulli AAC00-1] Length = 318 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 100/260 (38%), Positives = 146/260 (56%), Gaps = 5/260 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P I TR S LAL A ++ L + H + ++ ++T+GDRI +RTL+++GGKGLF Sbjct: 17 PIVIATRESRLALWQAEHVQALL----RARGHAVELLGMTTQGDRILDRTLSKVGGKGLF 72 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G AVHS KD+P +L +G +++ + RED RD F+S L DL Sbjct: 73 VKELEVALEEGRAHVAVHSLKDVPMELPEGFELACVMEREDPRDAFVSPRHACLADLPQG 132 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL E Sbjct: 133 AVVGTSSLRRQVLLQALRPDLVIQPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGLEGR 192 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + ++ P+ GQGA+ +E + V + H+ TW V ERA L GSC Sbjct: 193 IRALFEPDEMLPAAGQGALGLEVRSERHDLLQAVAPLAHQATWLCVAAERAVSRALGGSC 252 Query: 245 KSAIAGFA-YCKGSTLYFYG 263 +A + TL G Sbjct: 253 SVPLAAHGRWTDAGTLRLDG 272 >gi|116690445|ref|YP_836068.1| porphobilinogen deaminase [Burkholderia cenocepacia HI2424] gi|105893551|gb|ABF76716.1| porphobilinogen deaminase [Burkholderia cenocepacia AU 1054] gi|116648534|gb|ABK09175.1| porphobilinogen deaminase [Burkholderia cenocepacia HI2424] Length = 403 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 109/286 (38%), Positives = 161/286 (56%), Gaps = 5/286 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 90 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 147 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+ Sbjct: 148 LEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAGAVV 207 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E I+ Sbjct: 208 GTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARIRA 267 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC+ Sbjct: 268 LLDVEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPQTALAVEAERMVSRALGGSCEVP 327 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGR 290 +A A + LY G V +DGK G DA+ +GR Sbjct: 328 LAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGR 373 >gi|304436298|ref|ZP_07396276.1| hydroxymethylbilane synthase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370703|gb|EFM24350.1| hydroxymethylbilane synthase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 311 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 99/252 (39%), Positives = 144/252 (57%), Gaps = 2/252 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M IGTR S LAL A ++ H P + + L+TKGDRI + L +IGG Sbjct: 1 MNSGTITIGTRASKLALWQANYVAEAIKKEH--PSCCVELRELTTKGDRILDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ ++ +D AVHS KDMPT++ GL I A R D D F+S +++D Sbjct: 59 KGLFTKELEQAMLDDAVDLAVHSLKDMPTEIPDGLVIGAITTRLDPGDAFVSAHYAAVED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + + +GTSSLRR+A LL R D+++ D RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPVGARVGTSSLRRRAQLLAVRPDLTICDLRGNVNTRLAKLDAGEFDAIVLAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ IL P+ GQGA+ IE + ++ + + ERAFL + Sbjct: 179 FERRIRTILPRSVMLPAVGQGALAIECRAGDAAILSAIEFLRDAGMTTAAQAERAFLRRV 238 Query: 241 DGSCKSAIAGFA 252 +G C+ + +A Sbjct: 239 EGGCQIPVGVYA 250 >gi|66773161|ref|NP_001019559.1| hydroxymethylbilane synthase, b [Danio rerio] gi|63101908|gb|AAH95373.1| Hydroxymethylbilane synthase, b [Danio rerio] Length = 360 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 111/270 (41%), Positives = 150/270 (55%), Gaps = 8/270 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-IIPLSTKGDRITNRTLTEIGGKGLF 64 R+GTR S LA +T S + + ++ P + I+ +ST GD+I + L++IG K LF Sbjct: 18 IRVGTRKSQLA---RIQTDSVVEKLKELYPDVLFEIVAMSTTGDKILDTALSKIGEKSLF 74 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T+E+E L E+D VHS KD+PT L G I A L RE+ D + H + L L Sbjct: 75 TKELENALEKNEVDLVVHSLKDLPTVLPAGFTIGAVLKRENPHDAVVLHPKNKGKRLDSL 134 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKRLK 180 + SVIGTSSLRR A L + + D RG + TRL KL+ NN AI+LA AG+KR+ Sbjct: 135 SNKSVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDENNDFSAIILAAAGLKRMG 194 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I +IL ED + GQGA+ +E + E+V V+N DT S ERAFL L Sbjct: 195 WENRISQILGPEDCMYAVGQGALAVEVRARDLDILEMVSVLNDSDTALSCIAERAFLKHL 254 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 +G C +A + K S LY G V + DG Sbjct: 255 EGGCSVPVAVHSEVKNSQLYLTGAVYSLDG 284 >gi|268679946|ref|YP_003304377.1| porphobilinogen deaminase [Sulfurospirillum deleyianum DSM 6946] gi|268617977|gb|ACZ12342.1| porphobilinogen deaminase [Sulfurospirillum deleyianum DSM 6946] Length = 314 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 108/296 (36%), Positives = 161/296 (54%), Gaps = 7/296 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIP-LSTKGDRITNRTLTEIGGKG 62 K I TR S LAL + ++ L H PH V + + TKGD+I + L +IGGKG Sbjct: 2 KKLIIATRGSKLALWQSEHVKAELEKAH---PHLAVELSIMMTKGDKILDTPLAKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E+ ++ GE AVHS KD+P + +GL++ RED+RD +S L+DL Sbjct: 59 LFTKELEEAMLRGEAHIAVHSLKDVPMEFPEGLKLGVITKREDVRDAMLSEKYGCLEDLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GT+SLRR+ LL+ R D + + RG + TR+ KL + AI+LA AGIKRL + Sbjct: 119 QGAVVGTTSLRRRMQLLKLRPDFVIKNLRGNVNTRIRKLKEGEFDAIILASAGIKRLGLQ 178 Query: 183 KVIKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + ++ I E P+ GQ A+ IE V+N + + LV V+ ED ER F+ L Sbjct: 179 EEVRYFTPISKEVMIPASGQAALGIEI-VDNAEVERLVSVLKDEDAMIETRVERDFVTLL 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C+ I A +L+ I+ DG +G R + +G+ AQ + Sbjct: 238 EGGCQVPIGVNAEVTQESLHVKAILGLPDGSQMMCEVMSGKREEFETLGKVLAQKV 293 >gi|206560969|ref|YP_002231734.1| porphobilinogen deaminase [Burkholderia cenocepacia J2315] gi|238058732|sp|B4E8C4|HEM3_BURCJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|198037011|emb|CAR52932.1| putative porphobilinogen deaminase protein [Burkholderia cenocepacia J2315] Length = 334 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 110/295 (37%), Positives = 164/295 (55%), Gaps = 6/295 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 21 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 78 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+ Sbjct: 79 LEAALADGRADLAVHSLKDVPMALPDGFALAAIMEREDPRDAFVSNDYASLDALPAGAVV 138 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E I+ Sbjct: 139 GTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARIRA 198 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC+ Sbjct: 199 LLDVEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPRTALAVEAERMVSRALGGSCEVP 258 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 +A A + LY G V +DGK C A+ DA R +S++ Sbjct: 259 LAAHAVWRAGELYLTGRVSTTDGKRVL----TAEECGAVMTVADALALGRAVSDE 309 >gi|238061239|ref|ZP_04605948.1| porphobilinogen deaminase [Micromonospora sp. ATCC 39149] gi|237883050|gb|EEP71878.1| porphobilinogen deaminase [Micromonospora sp. ATCC 39149] Length = 322 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 101/308 (32%), Positives = 163/308 (52%), Gaps = 11/308 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + + ++L + ++ + T GDR ++ + +G G+F Sbjct: 4 PLRLGTRGSALAIAQSGQVAAALTAATG---REVELVEVVTAGDR-SSAPVHRLG-VGVF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L++ ID AVHS KD+PT GL I+A PR+D RD ++ ++L +L Sbjct: 59 VSALRDALVARTIDLAVHSYKDLPTAAASGLHIAAVPPRQDPRDALVAKGGRTLAELPPG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLKKE 182 +V+GT +LRR A L + V RG ++TRL ++ A A++LA AG+ RL + Sbjct: 119 AVVGTGALRRIAQLHALGLQLEVTPIRGNVDTRLARVLGPDADLDAVVLARAGLARLGRT 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+P QGA+ +E ++P EL+ V++H + +V ERA LA L+ Sbjct: 179 DVITETLDPMLMLPAPAQGALAVECRADDPDLVELLAVLDHAPSRAAVTAERALLATLEA 238 Query: 243 SCKSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C + +A +A G +Y G V++SDG +SR G DA IG+ A + Sbjct: 239 GCSAPVAAYAELAEGDVGDEIYLRGAVISSDGTRDLRLSRTGTPADAAEIGKALAAELLE 298 Query: 299 ISNKNVFN 306 + ++ Sbjct: 299 LGADSILG 306 >gi|228475193|ref|ZP_04059919.1| hydroxymethylbilane synthase [Staphylococcus hominis SK119] gi|228270804|gb|EEK12206.1| hydroxymethylbilane synthase [Staphylococcus hominis SK119] Length = 310 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 104/292 (35%), Positives = 170/292 (58%), Gaps = 6/292 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + L + P I I + TKGDRI N+ L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQSKQFIDKLKAID--PSLEIEIKEIVTKGDRIVNQQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+ +L + +ID A+HS KD+P+ + +GL + RE D +I+ L++L +S++ Sbjct: 64 IQNELFNNDIDMAIHSLKDVPSIIPEGLTLGCIPDREIPFDAYIAKNHVPLEELPKNSIV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L + + RG I+TRLNKL AI+LA AG+KR+ + V+ Sbjct: 124 GTSSLRRGAQILSKYPHLKIKWIRGNIDTRLNKLETEDYDAIILAAAGLKRMGWSDDVVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ + P+ GQGA+ IE N+ + EL++ +++ + + V ER FLA +DGSC+ Sbjct: 184 TYLDKDTLLPAIGQGALGIECRSNDIELLELLQKVHNNEVANCVTAERTFLASMDGSCQV 243 Query: 247 AIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 I G+A + + F G+++ DGK +E + G D + +G ++ ++ Sbjct: 244 PIGGYANYNNNNEIEFTGLIMTPDGKERYEHTEVG--TDPVKLGNRVSEILK 293 >gi|89098939|ref|ZP_01171819.1| porphobilinogen deaminase [Bacillus sp. NRRL B-14911] gi|89086343|gb|EAR65464.1| porphobilinogen deaminase [Bacillus sp. NRRL B-14911] Length = 311 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 110/291 (37%), Positives = 159/291 (54%), Gaps = 6/291 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL L + + + TKGD+I + TL+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQTNWVMDQLKKIDD--SFEFEVKEIVTKGDQILDVTLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ ++ EID AVHS KDMP L +GL I + RED RD IS Q+L L +V+ Sbjct: 64 IEQAMLDEEIDMAVHSMKDMPAVLPEGLVIGSIPEREDHRDALISKGHQTLDQLKPGAVV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A LL R D+ + RG I+TRL KL + AI+LA AG+ R+ + Sbjct: 124 GTSSLRRGAQLLAKRPDLEIKWIRGNIDTRLAKLETEEYDAIILAAAGLSRMGWTTDTVS 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E L E P+ GQGA+ IE ++ + EL+ T +V ERAFL +++G C+ Sbjct: 184 EFLEPEVCLPAVGQGALSIECRESDKELLELLSKFTCGTTNQTVRAERAFLHKMEGGCQV 243 Query: 247 AIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 IAG+A + + G+V + DGK ++ G D + +G A+ + Sbjct: 244 PIAGYAVLNEKDEIELTGLVASPDGKTIYKEKVTG--ADPVEVGLRTAEKL 292 >gi|228923217|ref|ZP_04086507.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836423|gb|EEM81774.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 309 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 112/285 (39%), Positives = 160/285 (56%), Gaps = 8/285 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAITERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 + IAG+A K + +V + DG + + + G + + + Sbjct: 242 QVPIAGYATLTKNDAIELTALVGSMDGSVLLKETVVGTNPEEVGL 286 >gi|15604330|ref|NP_220846.1| porphobilinogen deaminase [Rickettsia prowazekii str. Madrid E] gi|11386862|sp|Q9ZD77|HEM3_RICPR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|3861022|emb|CAA14922.1| PORPHOBILINOGEN DEAMINASE (hemC) [Rickettsia prowazekii] gi|292572083|gb|ADE29998.1| Porphobilinogen deaminase [Rickettsia prowazekii Rp22] Length = 299 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 100/249 (40%), Positives = 149/249 (59%), Gaps = 5/249 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL +T + + +I P N I+P+ T GD I N+ L +IGGK LF Sbjct: 5 IRIGTRNSTLAL---IQTNLVIEQIKQIFPDINCEIVPIITSGDLIQNKPLYDIGGKALF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE+ L+ +ID AVHS KD+P K+ L I+A L RED RDV + QS++ L + Sbjct: 62 LKEIEQALLDKKIDLAVHSLKDIPGKIPVELVIAAVLEREDPRDVLVCLNYQSIETLPQN 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-EK 183 +VIG+S++RRKA + + R D+++ FRG +++R+ KL + AI+L+YAG+KRL + Sbjct: 122 AVIGSSAVRRKAFIKKIRPDLNIKVFRGNVDSRIKKLMTGEVDAIILSYAGLKRLNVFNQ 181 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ P GQG I +E ++ + INH T++ + ERAFL LD + Sbjct: 182 KYCHLIEYSKMLPCIGQGVIAVEIRKDDNAMFNICSQINHLPTFELIKPERAFLEYLDAN 241 Query: 244 CKSAIAGFA 252 C + IA +A Sbjct: 242 CSTPIAAYA 250 >gi|154174368|ref|YP_001408386.1| porphobilinogen deaminase [Campylobacter curvus 525.92] gi|259647805|sp|A7GYU4|HEM3_CAMC5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|112802609|gb|EAT99953.1| porphobilinogen deaminase [Campylobacter curvus 525.92] Length = 311 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 103/269 (38%), Positives = 147/269 (54%), Gaps = 5/269 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR S LAL + ++ LM H + ++ + TKGD I + L +IGGKGL Sbjct: 2 KILKIATRKSALALWQSEHIKARLMAQH--AGLQVELVGMKTKGDVILDTPLAKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E ++SG+ AVHS KD+P L GL ++A RED+RD IS DL Sbjct: 60 FTKELEDSMLSGQTHIAVHSLKDVPVAFLDGLVLAAICSREDVRDAMISQRYVKFDDLPQ 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GT+SLRRK LLR R D+++I RG ++TRL KL + AI+LA AGI RL Sbjct: 120 SAKVGTTSLRRKMQLLRMRPDLNIISLRGNVQTRLRKLKEGEFDAIILAMAGINRLNLAD 179 Query: 184 VIKEI--LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I +I P+ GQGA+ +E V++ + E +K +N E + ER F+ L+ Sbjct: 180 EVAHIYPFDIAQMTPAMGQGALGVEA-VDDAQILEKIKFLNDERSVIETRVERDFVTLLE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C+ I A + IV DG Sbjct: 239 GGCQVPIGINARLASEEIEINAIVGLPDG 267 >gi|118479630|ref|YP_896781.1| porphobilinogen deaminase [Bacillus thuringiensis str. Al Hakam] gi|196039380|ref|ZP_03106686.1| hydroxymethylbilane synthase [Bacillus cereus NVH0597-99] gi|196044836|ref|ZP_03112070.1| porphobilinogen deaminase [Bacillus cereus 03BB108] gi|225866445|ref|YP_002751823.1| porphobilinogen deaminase [Bacillus cereus 03BB102] gi|229186706|ref|ZP_04313864.1| Porphobilinogen deaminase [Bacillus cereus BGSC 6E1] gi|158512516|sp|A0RJ81|HEM3_BACAH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800233|sp|C1ETR0|HEM3_BACC3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|118418855|gb|ABK87274.1| hydroxymethylbilane synthase [Bacillus thuringiensis str. Al Hakam] gi|196024324|gb|EDX62997.1| porphobilinogen deaminase [Bacillus cereus 03BB108] gi|196030007|gb|EDX68608.1| hydroxymethylbilane synthase [Bacillus cereus NVH0597-99] gi|225787726|gb|ACO27943.1| hydroxymethylbilane synthase [Bacillus cereus 03BB102] gi|228596719|gb|EEK54381.1| Porphobilinogen deaminase [Bacillus cereus BGSC 6E1] Length = 309 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 115/293 (39%), Positives = 165/293 (56%), Gaps = 10/293 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + +V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRL 292 >gi|75759963|ref|ZP_00740032.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228902993|ref|ZP_04067133.1| Porphobilinogen deaminase [Bacillus thuringiensis IBL 4222] gi|74492560|gb|EAO55707.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228856669|gb|EEN01189.1| Porphobilinogen deaminase [Bacillus thuringiensis IBL 4222] Length = 309 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 112/285 (39%), Positives = 160/285 (56%), Gaps = 8/285 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDAITERTVAAERVFLHRLEGGC 241 Query: 245 KSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 + IAG+A K T+ +V + DG + + + G + + + Sbjct: 242 QVPIAGYATLKENDTIELTALVGSMDGSVLLKETVVGTNPEEVGL 286 >gi|118444575|ref|YP_878763.1| porphobilinogen deaminase [Clostridium novyi NT] gi|189028087|sp|A0Q2B1|HEM3_CLONN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|118135031|gb|ABK62075.1| porphobilinogen deaminase [Clostridium novyi NT] Length = 300 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 109/293 (37%), Positives = 161/293 (54%), Gaps = 6/293 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + K P + +STKGDRI + L +IG KGLF +E Sbjct: 5 VGSRGSKLALTQTNWVIDKIK--QKYPQIQFEVKIISTKGDRIQHIALDKIGDKGLFVKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLALHSV 126 IE++LISG+ID AVHS KDM T++ + L+ S RED RDV I + S+ +L +++ Sbjct: 63 IEEQLISGDIDMAVHSMKDMSTEMPEELKFSYVPKREDYRDVLILNKKYNSIDELPMNAK 122 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVI 185 IGT S RRK LL++R D++++ RG +ETR+NK+ H ++LA AGIKRL +EK+ Sbjct: 123 IGTGSKRRKYQLLQYRDDLNIVPIRGNVETRINKIEMENLHGVVLASAGIKRLNIQEKLD 182 Query: 186 KEI--LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I LN + PSP QG + +E + +E++K I +++ ERAFL ++G Sbjct: 183 YNIFYLNEDIMLPSPAQGILALEIRKDREDLEEILKSIEDKNSSIQAVAERAFLKGVNGG 242 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C I + G++ DG S G DA IG + A+ + Sbjct: 243 CHVPIGAICNINKDNVELTGLLGKEDGSKIIRKSLGGKIEDAEKIGYELAEIV 295 >gi|229093561|ref|ZP_04224662.1| Porphobilinogen deaminase [Bacillus cereus Rock3-42] gi|228689770|gb|EEL43576.1| Porphobilinogen deaminase [Bacillus cereus Rock3-42] Length = 309 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 116/293 (39%), Positives = 165/293 (56%), Gaps = 10/293 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + +V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + IAG+A + + +V + DG I + + G D +G +AA + Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSILLKETVVGT--DPEKVGLEAADRL 292 >gi|187778036|ref|ZP_02994509.1| hypothetical protein CLOSPO_01628 [Clostridium sporogenes ATCC 15579] gi|187774964|gb|EDU38766.1| hypothetical protein CLOSPO_01628 [Clostridium sporogenes ATCC 15579] Length = 295 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 105/284 (36%), Positives = 156/284 (54%), Gaps = 4/284 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LA SL H I ++I T GD+I +L +IGGKGLF Sbjct: 8 FVIATRRSKLAQVQTEIIIDSLNKKHDIECEKLLI---ETIGDKILEVSLDKIGGKGLFV 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL + Sbjct: 65 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLREGA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I Sbjct: 125 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C Sbjct: 185 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 S I +A K + ++ GI + I E++ ++ + + I Sbjct: 244 STIGAYASIKDNIMHIIGIFERKNKIIKKEITGTKDQYEKLGIA 287 >gi|284161707|ref|YP_003400330.1| porphobilinogen deaminase [Archaeoglobus profundus DSM 5631] gi|284011704|gb|ADB57657.1| porphobilinogen deaminase [Archaeoglobus profundus DSM 5631] Length = 292 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 109/293 (37%), Positives = 161/293 (54%), Gaps = 17/293 (5%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LALA S +++ K +++ I + + GD + ++ L E G G F Sbjct: 7 VGTRGSKLALAQT----SKVVERLKEEGYSVEIRIIKSTGDIMKDKPLYEFKGSGAFVRA 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L+ GEID AVHS KD+P+ +L+G+ +SA L R+ D FI+ +SL+++ ++VI Sbjct: 63 LEHALVRGEIDVAVHSYKDIPSNMLEGVTVSAVLERDSPYDAFIARNGESLEEIKPNAVI 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A L +RSD+ + RG ++TRL KL AI+LA AGI+RL V + Sbjct: 123 GTSSLRRRAQLKLYRSDLRFENLRGNVDTRLRKLREGLYDAIVLAEAGIQRLGL-NVKYQ 181 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 L IE F P QG I ++T V ++LVK +NHE+TW ER + L C Sbjct: 182 RLPIERFVPPANQGIIAVQTRVGE---EDLVKFMNHEETWIEAEVERIVMKTLGVGCAIP 238 Query: 248 IAGFAYCKGSTLYFYGIVLASDG---KIFHEVSRNGNRCDAINIGRDAAQYIR 297 +A C+G ++ DG K+ E+SR AI R+ A+ R Sbjct: 239 AGIYAECRGKVRLIVQVI--RDGREFKVIEELSRE----SAIEEAREIAENFR 285 >gi|161527999|ref|YP_001581825.1| porphobilinogen deaminase [Nitrosopumilus maritimus SCM1] gi|238054422|sp|A9A1A1|HEM3_NITMS RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|160339300|gb|ABX12387.1| porphobilinogen deaminase [Nitrosopumilus maritimus SCM1] Length = 311 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 106/292 (36%), Positives = 158/292 (54%), Gaps = 4/292 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 + +G R S L++A + L H P I ++TKGD +R L I KG+F Sbjct: 3 YIVGARGSQLSVAQTNLVIAELKKAH--PDTEYEIKTITTKGD-TDSRPLFTIDQKGIFE 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EI++ + E+D AVHS KD+P++L L ++ RE + DVFIS +L + S Sbjct: 60 KEIDRAVAQKEVDFAVHSLKDVPSELDDNLVLACIPKRETVNDVFISPDGSTLDSIKPGS 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSSLRR + R R D++V RG IETR+ K + AI+LA AGI RL + Sbjct: 120 VIGTSSLRRAVQVSRKRPDVTVKPIRGNIETRIKKASGENYDAIVLAKAGISRLGVDVKY 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ +DF PSPGQGAI I ++ K E++K I D+ + ERA +D C+ Sbjct: 180 TE-LSTDDFSPSPGQGAIAIVARADDSKTIEMLKKIEDPDSRLEIEAERALSDFVDSGCR 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + +A GS + + DGK F VS+ G++ + ++G+ A + +R Sbjct: 239 FPVGAYAKSNGSEMTLTVTAFSVDGKQFLHVSKTGDKNNPKSLGQSAGEELR 290 >gi|218905666|ref|YP_002453500.1| porphobilinogen deaminase [Bacillus cereus AH820] gi|228917102|ref|ZP_04080660.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929511|ref|ZP_04092530.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935783|ref|ZP_04098595.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229124004|ref|ZP_04253196.1| Porphobilinogen deaminase [Bacillus cereus 95/8201] gi|254724608|ref|ZP_05186391.1| porphobilinogen deaminase [Bacillus anthracis str. A1055] gi|226740627|sp|B7JQ57|HEM3_BACC0 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|218537761|gb|ACK90159.1| porphobilinogen deaminase [Bacillus cereus AH820] gi|228659306|gb|EEL14954.1| Porphobilinogen deaminase [Bacillus cereus 95/8201] gi|228823840|gb|EEM69660.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830090|gb|EEM75708.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842520|gb|EEM87610.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 309 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 115/293 (39%), Positives = 165/293 (56%), Gaps = 10/293 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + +V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 242 QVPIAGYATITENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRL 292 >gi|206969979|ref|ZP_03230933.1| porphobilinogen deaminase [Bacillus cereus AH1134] gi|229192675|ref|ZP_04319634.1| Porphobilinogen deaminase [Bacillus cereus ATCC 10876] gi|206735667|gb|EDZ52835.1| porphobilinogen deaminase [Bacillus cereus AH1134] gi|228590765|gb|EEK48625.1| Porphobilinogen deaminase [Bacillus cereus ATCC 10876] Length = 309 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 115/293 (39%), Positives = 164/293 (55%), Gaps = 10/293 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAITERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEEVGLEAADRL 292 >gi|332764355|gb|EGJ94590.1| porphobilinogen deaminase [Shigella flexneri 2930-71] Length = 273 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 97/254 (38%), Positives = 142/254 (55%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 + T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +GL + Sbjct: 1 MVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICE 60 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG + TRL+KL+ Sbjct: 61 REDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLD 120 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + +EL+ +N Sbjct: 121 NGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALN 180 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 H +T V ERA L+G C+ I +A ++ +V A DG R G Sbjct: 181 HHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLCALVGAPDGSQIIRGERRGAP 240 Query: 283 CDAINIGRDAAQYI 296 DA +G A+ + Sbjct: 241 QDAEQMGISLAEEL 254 >gi|312137417|ref|YP_004004754.1| hydroxymethylbilane synthase [Methanothermus fervidus DSM 2088] gi|311225136|gb|ADP77992.1| hydroxymethylbilane synthase [Methanothermus fervidus DSM 2088] Length = 289 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 105/287 (36%), Positives = 162/287 (56%), Gaps = 6/287 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR SPLAL + + L K+ + I + T GD+I + L +IG +G+FT+E Sbjct: 3 VGTRGSPLALKQTYYVVNQL---SKLVNEEVKIKIIKTTGDKIKDSQLHKIGQRGVFTKE 59 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+K +++ E+D AVHS KD+PT+L + L+I A R+ +V +S S +L+ ++ Sbjct: 60 IDKAVLNEEVDLAVHSLKDVPTELHEDLEIVAIPHRDSPNEVLVSK--YSWDELSEECIL 117 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRRKA + RG IETR+ K+ + + A ++A A +KRL EK IK+ Sbjct: 118 GTSSLRRKAFCRYHGKKFKIKPLRGNIETRIKKVEDGEYDATIMAEAALKRLNLEKYIKK 177 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +++ F PS GQGAI IET ++ K ++K +N + V ER L EL C+ Sbjct: 178 RFSVKYFTPSAGQGAIAIETR-SDSKYISVLKKLNDHRAFYEVTAERTVLKELGVGCQWP 236 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 I A KG L Y I+L+ GK+ ++ +G +A +G+ AA+ Sbjct: 237 IGVVARSKGKNLNLYAILLSKKGKLLSKIELDGKLHEATKLGKKAAK 283 >gi|229032118|ref|ZP_04188096.1| Porphobilinogen deaminase [Bacillus cereus AH1271] gi|228729208|gb|EEL80206.1| Porphobilinogen deaminase [Bacillus cereus AH1271] Length = 309 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 110/285 (38%), Positives = 161/285 (56%), Gaps = 8/285 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLQEEDYDAIILATAGLQRMGWDDEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDAVTERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 + IAG+A + + +V + DG + + + G + + + Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGTNSEEVGL 286 >gi|168182770|ref|ZP_02617434.1| hydroxymethylbilane synthase [Clostridium botulinum Bf] gi|237794217|ref|YP_002861769.1| porphobilinogen deaminase [Clostridium botulinum Ba4 str. 657] gi|259647792|sp|C3L2Z3|HEM3_CLOB6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|182673912|gb|EDT85873.1| hydroxymethylbilane synthase [Clostridium botulinum Bf] gi|229263906|gb|ACQ54939.1| hydroxymethylbilane synthase [Clostridium botulinum Ba4 str. 657] Length = 290 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 105/284 (36%), Positives = 156/284 (54%), Gaps = 4/284 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LA L H I ++I T GD+I +L +IGGKGLF Sbjct: 3 FIIATRRSKLAQVQTEIIIDLLNKKHDIECEKLLI---ETVGDKILEVSLDKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL + Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLREGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L RSD+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I Sbjct: 120 KIGTSSRRRAAQLKLLRSDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 S I +A K + ++ GI + I E++ ++ + + I Sbjct: 239 STIGAYASIKDNIMHIIGIFERKNKIIKKEITGTKDQYEKLGIA 282 >gi|261393090|emb|CAX50687.1| porphobilinogen deaminase (PBG; hydroxymethylbilane synthase; HMBS; pre-uroporphyrinogen synthase) [Neisseria meningitidis 8013] Length = 311 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 103/296 (34%), Positives = 165/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKL 294 >gi|304388235|ref|ZP_07370355.1| hydroxymethylbilane synthase [Neisseria meningitidis ATCC 13091] gi|304337762|gb|EFM03911.1| hydroxymethylbilane synthase [Neisseria meningitidis ATCC 13091] Length = 311 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 105/296 (35%), Positives = 164/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDRTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYTRLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKL 294 >gi|254414246|ref|ZP_05028013.1| porphobilinogen deaminase [Microcoleus chthonoplastes PCC 7420] gi|196178921|gb|EDX73918.1| porphobilinogen deaminase [Microcoleus chthonoplastes PCC 7420] Length = 321 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 110/307 (35%), Positives = 164/307 (53%), Gaps = 7/307 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHK-IPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIG+R S LAL + + L HK P + + +ST GD+I + L++IG KG Sbjct: 10 RTIRIGSRKSQLALVQTYWVQEQL---HKHYPDRDFEVQTMSTHGDKILDVALSKIGDKG 66 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119 LFT+E+E +++ EID AVHS KD+PT L +GL + RE+ D + H + L Sbjct: 67 LFTKELEVGMLNQEIDLAVHSLKDLPTALPEGLVLGCVTERENPADALVLHAKHQGKQLD 126 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +VIGTSSLRR A L + D RG + TRL KL+ + A++LA AG+KRL Sbjct: 127 TLPEGAVIGTSSLRRLAQLRYHFPHFTFKDIRGNLNTRLGKLDAGEFDALILAAAGLKRL 186 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I +++ E + GQGA+ IE ++P+ +++K I H T ERAFL E Sbjct: 187 DMSDRIHQVIPSEISLHAVGQGALGIECRGDDPEILDVLKAIEHSPTAQRCYAERAFLRE 246 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I KG+ L G+V DG + + G +A +G + AQ +R Sbjct: 247 LEGGCQVPIGVNTEIKGNNLILTGMVARLDGTSLIKDTVTGEATEAEALGVELAQLLRQQ 306 Query: 300 SNKNVFN 306 + + + Sbjct: 307 GAQEILD 313 >gi|314936225|ref|ZP_07843572.1| hydroxymethylbilane synthase [Staphylococcus hominis subsp. hominis C80] gi|313654844|gb|EFS18589.1| hydroxymethylbilane synthase [Staphylococcus hominis subsp. hominis C80] Length = 310 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 104/292 (35%), Positives = 170/292 (58%), Gaps = 6/292 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + L + P I I + TKGDRI N+ L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQSKQFIDKLKAID--PSLEIEIKEIVTKGDRIVNQQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+ +L + +ID A+HS KD+P+ + +GL + RE D +I+ L++L +S++ Sbjct: 64 IQNELFNNDIDMAIHSLKDVPSIIPEGLTLGCIPDREIPFDAYIAKNHVPLEELPKNSIV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L + + RG I+TRLNKL AI+LA AG+KR+ + V+ Sbjct: 124 GTSSLRRGAQILSKYPHLKIKWIRGNIDTRLNKLETEDYDAIILAAAGLKRMGWSDDVVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ + P+ GQGA+ IE N+ + EL++ +++ + + V ER FLA +DGSC+ Sbjct: 184 TYLDKDTLLPAIGQGALGIECRRNDIELLELLQKVHNNEVANCVTAERTFLAAMDGSCQV 243 Query: 247 AIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 I G+A + + F G+++ DGK +E + G D + +G ++ ++ Sbjct: 244 PIGGYANYNNNNEIEFTGLIMTPDGKERYEHTEVG--TDPVKLGNRVSEILK 293 >gi|229111935|ref|ZP_04241479.1| Porphobilinogen deaminase [Bacillus cereus Rock1-15] gi|228671499|gb|EEL26799.1| Porphobilinogen deaminase [Bacillus cereus Rock1-15] Length = 309 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 114/290 (39%), Positives = 165/290 (56%), Gaps = 10/290 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + +V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEEYDAIILATAGLQRMGWDNEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDTITERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 + IAG+A + + +V + DG + + + G + +G +AA Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGTNPE--EVGLEAA 289 >gi|167636181|ref|ZP_02394485.1| porphobilinogen deaminase [Bacillus anthracis str. A0442] gi|170688695|ref|ZP_02879900.1| porphobilinogen deaminase [Bacillus anthracis str. A0465] gi|254687046|ref|ZP_05150904.1| porphobilinogen deaminase [Bacillus anthracis str. CNEVA-9066] gi|254741606|ref|ZP_05199293.1| porphobilinogen deaminase [Bacillus anthracis str. Kruger B] gi|167528402|gb|EDR91170.1| porphobilinogen deaminase [Bacillus anthracis str. A0442] gi|170667381|gb|EDT18139.1| porphobilinogen deaminase [Bacillus anthracis str. A0465] Length = 309 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 115/290 (39%), Positives = 164/290 (56%), Gaps = 10/290 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASYKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + +V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 + IAG+A + + +V + DG + + + G D +G +AA Sbjct: 242 QVPIAGYATITENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAA 289 >gi|30264532|ref|NP_846909.1| porphobilinogen deaminase [Bacillus anthracis str. Ames] gi|47529995|ref|YP_021344.1| porphobilinogen deaminase [Bacillus anthracis str. 'Ames Ancestor'] gi|49187356|ref|YP_030608.1| porphobilinogen deaminase [Bacillus anthracis str. Sterne] gi|65321833|ref|ZP_00394792.1| COG0181: Porphobilinogen deaminase [Bacillus anthracis str. A2012] gi|165871949|ref|ZP_02216590.1| porphobilinogen deaminase [Bacillus anthracis str. A0488] gi|167640713|ref|ZP_02398973.1| porphobilinogen deaminase [Bacillus anthracis str. A0193] gi|170708352|ref|ZP_02898796.1| porphobilinogen deaminase [Bacillus anthracis str. A0389] gi|177653999|ref|ZP_02936040.1| porphobilinogen deaminase [Bacillus anthracis str. A0174] gi|190566915|ref|ZP_03019831.1| porphobilinogen deaminase [Bacillus anthracis Tsiankovskii-I] gi|227817244|ref|YP_002817253.1| porphobilinogen deaminase [Bacillus anthracis str. CDC 684] gi|229601857|ref|YP_002868748.1| hydroxymethylbilane synthase [Bacillus anthracis str. A0248] gi|254736568|ref|ZP_05194274.1| porphobilinogen deaminase [Bacillus anthracis str. Western North America USA6153] gi|254754796|ref|ZP_05206831.1| porphobilinogen deaminase [Bacillus anthracis str. Vollum] gi|254757628|ref|ZP_05209655.1| porphobilinogen deaminase [Bacillus anthracis str. Australia 94] gi|39931467|sp|Q81LC7|HEM3_BACAN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800231|sp|C3P9E9|HEM3_BACAA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800232|sp|C3L6Z5|HEM3_BACAC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|30259190|gb|AAP28395.1| hydroxymethylbilane synthase [Bacillus anthracis str. Ames] gi|47505143|gb|AAT33819.1| porphobilinogen deaminase [Bacillus anthracis str. 'Ames Ancestor'] gi|49181283|gb|AAT56659.1| porphobilinogen deaminase [Bacillus anthracis str. Sterne] gi|164712239|gb|EDR17775.1| porphobilinogen deaminase [Bacillus anthracis str. A0488] gi|167511285|gb|EDR86671.1| porphobilinogen deaminase [Bacillus anthracis str. A0193] gi|170126727|gb|EDS95610.1| porphobilinogen deaminase [Bacillus anthracis str. A0389] gi|172081054|gb|EDT66132.1| porphobilinogen deaminase [Bacillus anthracis str. A0174] gi|190561906|gb|EDV15875.1| porphobilinogen deaminase [Bacillus anthracis Tsiankovskii-I] gi|227006938|gb|ACP16681.1| hydroxymethylbilane synthase [Bacillus anthracis str. CDC 684] gi|229266265|gb|ACQ47902.1| hydroxymethylbilane synthase [Bacillus anthracis str. A0248] Length = 309 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 115/290 (39%), Positives = 164/290 (56%), Gaps = 10/290 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASYKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + +V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 + IAG+A + + +V + DG + + + G D +G +AA Sbjct: 242 QVPIAGYATITENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAA 289 >gi|229117967|ref|ZP_04247327.1| Porphobilinogen deaminase [Bacillus cereus Rock1-3] gi|228665416|gb|EEL20898.1| Porphobilinogen deaminase [Bacillus cereus Rock1-3] Length = 295 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 103/241 (42%), Positives = 142/241 (58%), Gaps = 2/241 (0%) Query: 35 PHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKG 94 P+ + + TKGD I + TL+++GGKGLF +EIE L+ EID AVHS KDMP L +G Sbjct: 17 PYEFEVKEIVTKGDVILDVTLSKVGGKGLFVKEIEHALLMKEIDMAVHSMKDMPAVLPEG 76 Query: 95 LQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKI 154 L I R D RD FIS + S KDLA +++GTSSLRR A LL R D+ V RG I Sbjct: 77 LMIGCTPKRVDPRDAFISKSGASFKDLAEGAILGTSSLRRSAQLLAARPDLQVKWIRGNI 136 Query: 155 ETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 +TRL KL AI+LA AG++R+ ++VI E L+ P+ GQGA+ IE ++ Sbjct: 137 DTRLRKLKEEDYDAIILATAGLQRMGWDDEVITEHLDETLCVPAVGQGALAIECRKDDND 196 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKI 272 +L+ +N T +V ER FL +L+G C+ IAG+A K + +V + DG + Sbjct: 197 LLQLLSHMNDAVTERTVAAERVFLHKLEGGCQVPIAGYATLTKDDAIELTALVGSMDGSV 256 Query: 273 F 273 Sbjct: 257 L 257 >gi|325202672|gb|ADY98126.1| porphobilinogen deaminase [Neisseria meningitidis M01-240149] Length = 311 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 103/296 (34%), Positives = 165/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPKGVVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKL 294 >gi|124005986|ref|ZP_01690823.1| porphobilinogen deaminase [Microscilla marina ATCC 23134] gi|123988393|gb|EAY28039.1| porphobilinogen deaminase [Microscilla marina ATCC 23134] Length = 308 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 106/294 (36%), Positives = 162/294 (55%), Gaps = 7/294 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + + D+ + ++ + TKGD+I N+ L++IG KG+FT Sbjct: 3 IRIGTRGSKLALWQA----NYVADLLQKGGATTELVMVETKGDKILNKALSKIGSKGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDLALH 124 EE+E+ L E+D AVHSAKD+ + L L++ A+ RE++ DV IS +T L Sbjct: 59 EELEEHLRQKEVDIAVHSAKDVQSTLPDDLELIAFSEREEVHDVLISFNTDARLDTFNSS 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +IGTSS RR A L + I D RG ++TR+ KL A++LAYAG+ R+ K Sbjct: 119 YIIGTSSTRRVAQLKHYYPKIRTADVRGNLQTRMKKLEKGNYDALILAYAGVHRMGFSKY 178 Query: 185 IKEILNIEDFPPSPGQGAICIET--HVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E L+ F P+ GQG + IE +NN K + + +N + T + ER+FL L+G Sbjct: 179 IVEDLSPNKFIPAVGQGCVAIEAAKDLNNDKVAMIRQCVNDKKTEQCLRAERSFLKTLEG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C + G A K + + G +++ +G+ + G D ++IG+ A+ I Sbjct: 239 GCSIPVFGLARIKKNQIELKGGIISLNGQDLVKQQAKGVLDDGVSIGKQLAERI 292 >gi|301630638|ref|XP_002944423.1| PREDICTED: porphobilinogen deaminase-like [Xenopus (Silurana) tropicalis] Length = 343 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 97/254 (38%), Positives = 144/254 (56%), Gaps = 4/254 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A ++ L H + ++ L+T+GD+I +R+L++IGGKGLF +E Sbjct: 47 IATRESRLALWQAAHVQALLAARG----HAVTLLGLTTQGDQILDRSLSKIGGKGLFVKE 102 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P +L G ++ + RED RD F+S SL L +V+ Sbjct: 103 LELALEQGRADIAVHSLKDVPMELPAGFALACVMEREDARDAFVSPRYASLDALPQGAVV 162 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+ LL R + + RG ++TRL KL+ + AI+LA AG+KRL + I+ Sbjct: 163 GTSSLRRQVLLQALRPGLRIEPLRGNLDTRLRKLDAGQYDAIVLAAAGLKRLGLGERIRS 222 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + + P+ GQGA+ IE + + + + H TW +V ERA + GSC Sbjct: 223 VFAPAEILPAAGQGALGIEVRSDRQDLIDALAPLAHRPTWLTVAAERAVSRAMGGSCSMP 282 Query: 248 IAGFAYCKGSTLYF 261 +A +G+TL+ Sbjct: 283 LAAHGQWQGNTLHL 296 >gi|255657374|ref|ZP_05402783.1| porphobilinogen deaminase [Clostridium difficile QCD-23m63] gi|296448968|ref|ZP_06890759.1| hydroxymethylbilane synthase [Clostridium difficile NAP08] gi|296879793|ref|ZP_06903766.1| hydroxymethylbilane synthase [Clostridium difficile NAP07] gi|296262194|gb|EFH08998.1| hydroxymethylbilane synthase [Clostridium difficile NAP08] gi|296429082|gb|EFH14956.1| hydroxymethylbilane synthase [Clostridium difficile NAP07] Length = 301 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 103/265 (38%), Positives = 150/265 (56%), Gaps = 3/265 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LAL + L K P + I + TKGD I N +L +IG KGLF +E Sbjct: 5 VGTRGSNLALIQTEWVINELK--KKYPEISFEIKIIKTKGDLIQNVSLDKIGDKGLFVKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLALHSV 126 IE++L+ G+ID AVHS KDMP+ L GL+ + RED RDV I ++L DL +V Sbjct: 63 IEQQLLYGKIDIAVHSMKDMPSYLADGLKFAHTPKREDPRDVLILREGYKNLDDLPRGAV 122 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGT S RRK LL+ R D++++ RG +ETR+ K+ + H I+LA +GI R + I Sbjct: 123 IGTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDKIS 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L ++ P+P QGA+ IE N+ K + +V + E+T + ER FL ++GSC Sbjct: 183 SYLPVDVVIPAPAQGALAIEIRSNDSKIEGIVNSLKDENTEIQILAERGFLDGVNGSCHI 242 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGK 271 +A + ++ G+ S+GK Sbjct: 243 PMAAYCEIIQDKIHLTGLYGDSEGK 267 >gi|153939780|ref|YP_001390273.1| porphobilinogen deaminase [Clostridium botulinum F str. Langeland] gi|166201504|sp|A7GBW3|HEM3_CLOBL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|152935676|gb|ABS41174.1| hydroxymethylbilane synthase [Clostridium botulinum F str. Langeland] gi|295318368|gb|ADF98745.1| hydroxymethylbilane synthase [Clostridium botulinum F str. 230613] Length = 290 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 105/284 (36%), Positives = 155/284 (54%), Gaps = 4/284 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LA L H I ++I T GD+I +L +IGGKGLF Sbjct: 3 FIIATRRSKLAQVQTEIIIDLLNKKHDIECEKLLI---ETVGDKILEVSLDKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL + Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPKREDVRDAFISLDNIKFKDLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ E +I Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLEHLI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 S I +A K + ++ GI + I E++ ++ + + I Sbjct: 239 STIGAYASIKDNIMHIIGIFERKNKIIKKEITGTKDQYEKLGIA 282 >gi|282901179|ref|ZP_06309108.1| Porphobilinogen deaminase [Cylindrospermopsis raciborskii CS-505] gi|281193879|gb|EFA68847.1| Porphobilinogen deaminase [Cylindrospermopsis raciborskii CS-505] Length = 322 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 111/295 (37%), Positives = 160/295 (54%), Gaps = 5/295 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LAL + + L + P + + +ST+GD+I + L +IG KGLFT Sbjct: 11 IRIGSRKSELALVQTYWVQEQLQKSY--PDIDFQVHTMSTQGDKILDVALAKIGDKGLFT 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122 +E+E +I+ EID AVHS KD+PT L +GL ++A RE+ D + +H Q+L L Sbjct: 69 KELELGMINQEIDFAVHSLKDLPTNLPEGLTLAAITERENPADAVVFHQNHLGQTLATLP 128 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SVIGTSSLRR A L + D RG + TR+ KL+ + A++LA AG++RL Sbjct: 129 PGSVIGTSSLRRLAQLRHKFPHFTFKDVRGNLNTRMTKLDAGEYDALILAVAGLERLNMH 188 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EIL + + GQGA+ IE N+ + ++K I H T D ER+FL L+G Sbjct: 189 HRIHEILPPDISLHAVGQGALGIECRENDLELITILKAIEHPQTRDRCLAERSFLRSLEG 248 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C+ I G TL GIV + +G+ + + G DA +G A +R Sbjct: 249 GCQVPIGVNTEIDGETLTLTGIVASVNGENLVKNTITGAATDAEKLGTQLANILR 303 >gi|212638453|ref|YP_002314973.1| porphobilinogen deaminase [Anoxybacillus flavithermus WK1] gi|212559933|gb|ACJ32988.1| Porphobilinogen deaminase (hydroxymethylbilane synthase) [Anoxybacillus flavithermus WK1] Length = 313 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 110/301 (36%), Positives = 162/301 (53%), Gaps = 10/301 (3%) Query: 1 MEKKPFR---IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57 ME+ R +G+R S LAL L + P + + TKGD+I + TL++ Sbjct: 1 MEESMMRKIIVGSRRSKLALTQTNWVIEQLKQLGA--PFEFEVKEIVTKGDQILHVTLSK 58 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 +GGKGLF +EIE+ ++ GEID AVHS KDMP L GL I RED RDV IS Sbjct: 59 VGGKGLFVKEIEQAMLDGEIDFAVHSMKDMPAVLPDGLVIGCVPKREDHRDVLISKGHIP 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 + L +++GTSSLRR A LL R D+ + RG I+TRL KL + AI+LA AG+ Sbjct: 119 FEQLPSGAIVGTSSLRRSAQLLAVRPDLQIQWIRGNIDTRLAKLQTDAYDAIILAAAGLH 178 Query: 178 RLKKEK-VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ K VI + L + P+ GQGA+ IE N+ + + + + T + ERAF Sbjct: 179 RMGWAKEVITQYLPTDICVPAVGQGALAIECRENDAELLHWLNKLTDKQTERATRAERAF 238 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNGNRCDAINIGRDAAQY 295 L ++G C+ +AG+AY + +V +G ++ EV + + +G +AA+ Sbjct: 239 LQHIEGGCQVPVAGYAYVDEDAIVLTALVATPNGTEVLKEVVKG---TEPEKVGTEAAKR 295 Query: 296 I 296 + Sbjct: 296 L 296 >gi|119503707|ref|ZP_01625789.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2080] gi|119460215|gb|EAW41308.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2080] Length = 302 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 105/289 (36%), Positives = 159/289 (55%), Gaps = 6/289 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR SPLAL A L ++ P + ++ ++++GD++ ++ L ++GGKGLF +E Sbjct: 6 IATRESPLALWQANYVADRLRALY--PELMVELLGMTSRGDQLLDKPLYKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L+ G D AVHS KD+P L GL + RED RD + +A L +L + Sbjct: 64 LETALLDGRADIAVHSMKDVPMALPPGLTLGVICEREDPRDALVGISA--LSELEQGARF 121 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR + R R D+ + RG + TRL KL+ + AI+LA AG+ RL E I Sbjct: 122 GTSSLRRACQIRRVRPDLEIGFLRGNVNTRLAKLDAGEFDAIILATAGLVRLGFESRIGA 181 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + E P+ GQGA+ IE ++ + EL+ +N DT + V ERA + LDG C Sbjct: 182 RIEPEVSLPAGGQGAVGIEYRSDDDRVAELLAPLNDADTAECVTAERAVVRVLDGGCDVP 241 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 IA +A +G+ L+ +V + DG+ E G +A +G++ AQ + Sbjct: 242 IASYAVKEGNELWLRALVGSVDGRSVLEAQSRG--ANAEELGQEVAQAL 288 >gi|47566654|ref|ZP_00237476.1| porphobilinogen deaminase [Bacillus cereus G9241] gi|228960740|ref|ZP_04122379.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228987716|ref|ZP_04147827.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229158082|ref|ZP_04286152.1| Porphobilinogen deaminase [Bacillus cereus ATCC 4342] gi|47556684|gb|EAL15016.1| porphobilinogen deaminase [Bacillus cereus G9241] gi|228625401|gb|EEK82158.1| Porphobilinogen deaminase [Bacillus cereus ATCC 4342] gi|228771990|gb|EEM20445.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228798956|gb|EEM45931.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 309 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 114/293 (38%), Positives = 165/293 (56%), Gaps = 10/293 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + +V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDGITEKTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRL 292 >gi|228941631|ref|ZP_04104178.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974560|ref|ZP_04135126.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981155|ref|ZP_04141455.1| Porphobilinogen deaminase [Bacillus thuringiensis Bt407] gi|228778355|gb|EEM26622.1| Porphobilinogen deaminase [Bacillus thuringiensis Bt407] gi|228784963|gb|EEM32976.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817843|gb|EEM63921.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942243|gb|AEA18139.1| porphobilinogen deaminase [Bacillus thuringiensis serovar chinensis CT-43] Length = 309 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 110/270 (40%), Positives = 154/270 (57%), Gaps = 8/270 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C Sbjct: 182 ITEHLDEALCVPAVGQGALAIECREDDKDLLQLLSHINDAITERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIF 273 + IAG+A + + +V + DG + Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVL 271 >gi|282895464|ref|ZP_06303601.1| Porphobilinogen deaminase [Raphidiopsis brookii D9] gi|281199497|gb|EFA74360.1| Porphobilinogen deaminase [Raphidiopsis brookii D9] Length = 322 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 110/297 (37%), Positives = 161/297 (54%), Gaps = 5/297 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + + L + P + + +ST+GD+I + L +IG KGL Sbjct: 9 RTIRIGSRKSELALVQTYWVQEQLQKSY--PDIDFQVHTMSTQGDKILDVALAKIGDKGL 66 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120 FT+E+E +I+ EID AVHS KD+PT L GL ++A RE+ D + +H Q+L Sbjct: 67 FTKELELGMINQEIDFAVHSLKDLPTNLPAGLTLAAITARENPADAVVFHQNHLGQTLDT 126 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SVIGTSSLRR A L S + D RG + TR+ KL+ + A++LA AG++RL Sbjct: 127 LPPGSVIGTSSLRRLAQLRHKFSHFTFKDVRGNLNTRMTKLDAGEYDALILAVAGLERLN 186 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +IL + + GQGA+ IE N+ + ++K I H T D ER+FL L Sbjct: 187 MHHRIHQILPPDISLHAVGQGALGIECRENDSELITILKAIEHPQTRDRCLAERSFLRSL 246 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +G C+ I G +L GIV + +G+ + + G DA +G A +R Sbjct: 247 EGGCQVPIGVNTEIDGESLTLTGIVASVNGENLVKNTITGAAADAEKLGTQLANILR 303 >gi|238756296|ref|ZP_04617611.1| Porphobilinogen deaminase [Yersinia ruckeri ATCC 29473] gi|238705502|gb|EEP97904.1| Porphobilinogen deaminase [Yersinia ruckeri ATCC 29473] Length = 315 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 107/289 (37%), Positives = 157/289 (54%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A + L H + ++P+ T+GD I + L ++GG Sbjct: 3 MSDKIIRIATRQSPLAMWQAHYVQQLLQTCHS--GLKVELVPMVTRGDIILDTPLAKVGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + R+D RD F+S+ Q + D Sbjct: 61 KGLFVKELELALLEDRADIAVHSMKDVPIAFPQGLGLVTICERDDPRDAFVSNNYQRMDD 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L + R D+ V D RG + TRL+KL+ AI+LA AG+ RL Sbjct: 121 LPAGSIVGTSSLRRQCQLRQRRPDLIVKDLRGNVGTRLSKLDQGDYDAIILAVAGLNRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ ++ E+ P+ GQGA+ IE +++ + L+ +NH T V ERA L Sbjct: 181 LKDRIRYAMSPEESLPAVGQGAVGIECRLDDNLTRALLAPLNHRPTELRVCAERAMNTRL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +G C+ I +A + TL+ +V A DG R G A +G Sbjct: 241 EGGCQVPIGSYAILEDDTLWLRALVGAPDGSQMICGERRGPATHAEQMG 289 >gi|229175146|ref|ZP_04302662.1| Porphobilinogen deaminase [Bacillus cereus MM3] gi|228608282|gb|EEK65588.1| Porphobilinogen deaminase [Bacillus cereus MM3] Length = 309 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 111/285 (38%), Positives = 161/285 (56%), Gaps = 8/285 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + +V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLQEEDYDAIILATAGLQRMGWDNEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDTVTERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 + IAG+A + + +V + DG I + + G + + + Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSILLKETVVGTNPEEVGL 286 >gi|224437777|ref|ZP_03658724.1| porphobilinogen deaminase [Helicobacter cinaedi CCUG 18818] gi|313144223|ref|ZP_07806416.1| porphobilinogen deaminase [Helicobacter cinaedi CCUG 18818] gi|313129254|gb|EFR46871.1| porphobilinogen deaminase [Helicobacter cinaedi CCUG 18818] Length = 323 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 110/297 (37%), Positives = 171/297 (57%), Gaps = 14/297 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LAL A ++ L D ++ +I T+GD+I + L +IGGKGLFT+E Sbjct: 11 IGTRGSALALWQAQYVKNRLKDECRLDSEFKII---KTQGDKILDVPLAKIGGKGLFTKE 67 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+KL+ EID AVHS KD+P ++L L ++A RED RD F+S +SL+ L+ + + Sbjct: 68 LEQKLLDKEIDLAVHSLKDVPVEILPLLDLAAITEREDCRDCFLSMKYESLESLSQGARV 127 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL-----KKE 182 GT+SLRR + +R+D+ + RG I+TRL KL N AI+LA AG+KRL K + Sbjct: 128 GTTSLRRSMQIKAFRADLDTLSLRGNIQTRLEKLKNGVFDAIILAQAGVKRLGIDVKKND 187 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I I+ ++ P+ GQGA+ IE ++P E + + H+ + V+ ER+F+ EL+G Sbjct: 188 MGICHIVPLDFMIPAMGQGALGIEMRKDSPYF-ETISRLTHKRSALCVSAERSFVRELEG 246 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK-IFHEVSRNG----NRCDAINIGRDAAQ 294 C+ I A + L +V +G+ I E + ++ A ++G++ AQ Sbjct: 247 GCQVPIGVQAMYENGILRLRAMVGLPNGQEILQESLEDSILEEDKAKAESLGKNLAQ 303 >gi|188589216|ref|YP_001922029.1| porphobilinogen deaminase [Clostridium botulinum E3 str. Alaska E43] gi|254800242|sp|B2UXC4|HEM3_CLOBA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|188499497|gb|ACD52633.1| porphobilinogen deaminase [Clostridium botulinum E3 str. Alaska E43] Length = 290 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 110/291 (37%), Positives = 162/291 (55%), Gaps = 10/291 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LA S L I ++I+ T+GDR + +L +IGGKGLF ++ Sbjct: 6 IATRKSKLAQVQTEIIMSELKSKFNIDSKKLLIV---TEGDRKLDVSLNKIGGKGLFVKD 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE L++ E AVHS KD+P ++ +I+A REDIRDVFIS+ S KD+ + + Sbjct: 63 IELALLNKEAHAAVHSMKDVPFEVSSEFEITAITGREDIRDVFISNGDISFKDIKKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSS+RR A L RSD+ ++ RG ++TRL K+ I+LA AG+KRL E +I + Sbjct: 123 GTSSIRRAAQLKLLRSDLEIVPIRGNVQTRLKKMEEQNLDGIVLAAAGLKRLGDENLITD 182 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + ++F P+ QGA+ IE + + +I+ E T +V ER+F+ EL G C S Sbjct: 183 YFDPKEFLPAVSQGALGIECLKDGDANKYFEALIDAEATL-TVEAERSFMKELQGDCHSL 241 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN--GNRCDAINIGRDAAQYI 296 I ++ +G LY GI GKI V ++ G + + I +G+ AQ I Sbjct: 242 IGAYSEIQGDDLYMIGIYDIG-GKI---VKKDILGCKTNNIELGKKLAQKI 288 >gi|186476930|ref|YP_001858400.1| porphobilinogen deaminase [Burkholderia phymatum STM815] gi|238058733|sp|B2JEN9|HEM3_BURP8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|184193389|gb|ACC71354.1| porphobilinogen deaminase [Burkholderia phymatum STM815] Length = 327 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 112/293 (38%), Positives = 167/293 (56%), Gaps = 7/293 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 I +R S LA+ A R +L HK+ P ++ I+ ++T+GD+I +RTL+++GGKGLF + Sbjct: 16 IASRESRLAMWQAEHVRCAL---HKLYPSCDVKILGMTTRGDQILDRTLSKVGGKGLFVK 72 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 E+E L G D AVHS KD+P +L +G +S + RED RD F+S+ SL L SV Sbjct: 73 ELENALADGRADLAVHSLKDVPMELPEGFVLSTIMEREDPRDAFVSNQYDSLAALPAGSV 132 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSSLRR+A+L ++ V RG ++TRL KL+ AI+LA AG+KRL + I+ Sbjct: 133 VGTSSLRREAMLRARYPELVVKPLRGNLDTRLGKLDRGDYAAIILAAAGLKRLGLGERIR 192 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 +L+ D P+ GQGA+ IE + ++HE T +V ER L GSC+ Sbjct: 193 SLLDPADSLPAAGQGALGIEIRAGRDDLAAWLAPLHHEHTAAAVEAERMVSRTLGGSCEV 252 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCD-AINIGRDAAQYI 296 +A +A L+ GIV DG+ + + S D A+ +GR+ A + Sbjct: 253 PLAAYATWHDGALHLRGIVATPDGERVLSAQASAPAATTDAALELGREVASQL 305 >gi|229048181|ref|ZP_04193750.1| Porphobilinogen deaminase [Bacillus cereus AH676] gi|228723168|gb|EEL74544.1| Porphobilinogen deaminase [Bacillus cereus AH676] Length = 309 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 110/270 (40%), Positives = 153/270 (56%), Gaps = 8/270 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-V 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNDV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C Sbjct: 182 ITEHLDDTLCVPAVGQGALAIECREDDKDLLQLLAYINDTITERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIF 273 + IAG+A + + +V + DG + Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVL 271 >gi|302333336|gb|ADL23529.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus JKD6159] Length = 308 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 104/292 (35%), Positives = 165/292 (56%), Gaps = 6/292 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L S+I Sbjct: 64 IQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPEGSII 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + ++ Sbjct: 124 GTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSDDIVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DGSC+ Sbjct: 184 SYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDGSCQV 243 Query: 247 AIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 IAG+A + F G+++ DGK E + NG + + +G+ + ++ Sbjct: 244 PIAGYATISDQKEIEFTGLIMTPDGKERFEYTLNGT--NPVELGKKVSNKLK 293 >gi|254467792|ref|ZP_05081198.1| porphobilinogen deaminase [beta proteobacterium KB13] gi|207086602|gb|EDZ63885.1| porphobilinogen deaminase [beta proteobacterium KB13] Length = 292 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 101/277 (36%), Positives = 149/277 (53%) Query: 31 HKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTK 90 K P + ++ T+GD I ++ L EIGGKGLF +E+E L++ + D AVHS KD+P Sbjct: 13 EKYPDTEVNVLSFKTQGDIILDQPLAEIGGKGLFIKELEHALLNDDADLAVHSMKDVPMD 72 Query: 91 LLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDF 150 L + +I A RE+ D FIS+ SL DL +VIGTSSLRR++L+ R D+ + Sbjct: 73 LPEPFEICAISERENPSDAFISNKYASLDDLPQDAVIGTSSLRRQSLIKHTRPDLIIESL 132 Query: 151 RGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVN 210 RG ++TRL KL++ AI+LA AG+ RL E IK L+++ + PS GQGA+ IE N Sbjct: 133 RGNLQTRLKKLDSGIYDAIILASAGLIRLNLENRIKSTLDVKQYIPSVGQGALGIEILKN 192 Query: 211 NPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 + +E + +N E T V ER L GSC + A K + L V + DG Sbjct: 193 KSEVKEFLDFLNDEQTQIQVEAERKISKTLAGSCTVPMGAHASIKNNLLTIQAFVSSPDG 252 Query: 271 KIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307 + G + +++ + AQ + KN+ Sbjct: 253 IKMIRATDTGPCSEHLSLANNVAQSLIDQGAKNILGL 289 >gi|228954747|ref|ZP_04116769.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229071973|ref|ZP_04205183.1| Porphobilinogen deaminase [Bacillus cereus F65185] gi|229081729|ref|ZP_04214222.1| Porphobilinogen deaminase [Bacillus cereus Rock4-2] gi|229180740|ref|ZP_04308078.1| Porphobilinogen deaminase [Bacillus cereus 172560W] gi|228602718|gb|EEK60201.1| Porphobilinogen deaminase [Bacillus cereus 172560W] gi|228701574|gb|EEL54067.1| Porphobilinogen deaminase [Bacillus cereus Rock4-2] gi|228711132|gb|EEL63097.1| Porphobilinogen deaminase [Bacillus cereus F65185] gi|228804945|gb|EEM51542.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 309 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 111/285 (38%), Positives = 160/285 (56%), Gaps = 8/285 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C Sbjct: 182 ITEHLDEALCVPAVGQGALAIECREDDKDLLQLLAHINDTITERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 + IAG+A + + +V + DG + + + G + + + Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGTNPEEVGL 286 >gi|89900504|ref|YP_522975.1| porphobilinogen deaminase [Rhodoferax ferrireducens T118] gi|122996949|sp|Q21XQ9|HEM3_RHOFD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|89345241|gb|ABD69444.1| porphobilinogen deaminase [Rhodoferax ferrireducens T118] Length = 315 Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 99/267 (37%), Positives = 144/267 (53%), Gaps = 4/267 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A + D+ H + ++ ++T GD+I +R L+++GGKGLF Sbjct: 4 LTIATRESRLALWQA----EYVQDLLTRRGHQVGLLGMTTLGDQILDRALSKVGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P +L G ++ + RED RD F+S+ +L L + Sbjct: 60 KELEVALEDGRADLAVHSLKDVPMELPDGFALACVMEREDPRDAFVSNQYANLASLPQGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR ALL R D+ + RG ++TRL KL++ AI+LA AG+KRL + I Sbjct: 120 VVGTSSLRRMALLRALRPDLKIEPLRGNLDTRLRKLDDGMYAAIVLAAAGLKRLGLSQRI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + D P+ GQGA+ IE + + + H TW +V+ ERA + GSC Sbjct: 180 RATFEPTDMLPAAGQGALGIEVRSQRQDVIDALAPLAHHTTWLAVSAERAVSRAMGGSCS 239 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKI 272 +A +A L DGK+ Sbjct: 240 MPLAAYATLAADILTIDAAWGDPDGKL 266 >gi|229147034|ref|ZP_04275394.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST24] gi|228636422|gb|EEK92892.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST24] Length = 309 Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 110/270 (40%), Positives = 155/270 (57%), Gaps = 8/270 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + +V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDTITERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIF 273 + IAG+A + + +V + DG + Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVL 271 >gi|302875078|ref|YP_003843711.1| porphobilinogen deaminase [Clostridium cellulovorans 743B] gi|307690298|ref|ZP_07632744.1| porphobilinogen deaminase [Clostridium cellulovorans 743B] gi|302577935|gb|ADL51947.1| porphobilinogen deaminase [Clostridium cellulovorans 743B] Length = 300 Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 107/279 (38%), Positives = 157/279 (56%), Gaps = 17/279 (6%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK RIGTR S LAL ++ H P N ++ +STKGD I +++L GGKG Sbjct: 2 KKIIRIGTRKSKLALMQTNIVIDAIKKKH--PEINCEVVEMSTKGDEILDKSLLSFGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDL 121 F E EK + SGEID AVHSAKDMP LL GL+I A RED RDV ++ + ++ D Sbjct: 60 AFVSEFEKAIKSGEIDLAVHSAKDMPMDLLTGLKIVAVTKREDPRDVLVTANNKDTINDF 119 Query: 122 -ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR-- 178 + +IGT+SLRRK + R +++ D RG ++ RL KL + + I+LA AG+KR Sbjct: 120 NKTNKLIGTTSLRRKLQIKRLLNNVDTKDLRGNVQRRLEKLISGEYDGIILAAAGLKRLG 179 Query: 179 -LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE----LVKVINHEDTWDSVNCE 233 L E++ L++EDF P+ GQG I +E +A+E L I++E+ S+ E Sbjct: 180 LLDDERINLNYLSVEDFIPAGGQGIIAVE-----GRAEEEFSFLKDSIHNEEAMYSLEVE 234 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272 R + +L+ C I +++ T+ F I+ +GK+ Sbjct: 235 RYVMKKLNAGCNEPIGAYSFIDKDTI-FLDIIYEHNGKV 272 >gi|292670850|ref|ZP_06604276.1| hydroxymethylbilane synthase [Selenomonas noxia ATCC 43541] gi|292647471|gb|EFF65443.1| hydroxymethylbilane synthase [Selenomonas noxia ATCC 43541] Length = 271 Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 91/226 (40%), Positives = 139/226 (61%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 ++TKGDRI + L +IGGKGLFT+E+E+ +++G+ID AVHS KDMPT++ KGL I A Sbjct: 1 MTTKGDRILDAPLAKIGGKGLFTKELEQAMLAGQIDIAVHSLKDMPTEIPKGLIIGAITK 60 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 R D D F+S S+++L + + +GTSSLRR+A LL R D+ ++D RG + TRL KL+ Sbjct: 61 RLDPGDAFVSVNYTSIEELPIGAKVGTSSLRRRAQLLAVRPDLQLLDLRGNVNTRLAKLD 120 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 AI+LA AG+KRL I+ IL+ P+ GQG + IE ++ + ++ ++ Sbjct: 121 AGDFDAIILAAAGLKRLGLGNRIRSILSQRMMLPAVGQGTLAIECRADDTRILSVIDFLH 180 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS 268 + + ERAFL ++G C+ + +A K L ++AS Sbjct: 181 DRNMSAAAMAERAFLCRVEGGCQIPVGVYADLKEDGLLHVDAMIAS 226 >gi|326792716|ref|YP_004310537.1| porphobilinogen deaminase [Clostridium lentocellum DSM 5427] gi|326543480|gb|ADZ85339.1| porphobilinogen deaminase [Clostridium lentocellum DSM 5427] Length = 301 Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 107/266 (40%), Positives = 152/266 (57%), Gaps = 5/266 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHK-IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 IGTR S LAL +T+ + ++ K P + + TKGD I ++ L +IG KG+FT+ Sbjct: 5 IGTRGSRLALT---QTKWVIDELEKHYPELACEMKIIKTKGDLIQDKPLDKIGDKGIFTK 61 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLALHS 125 EIE +L+ G ID AVHS KDMP++L GL+ + L RED RDV I S++DL + + Sbjct: 62 EIEAELLKGNIDMAVHSMKDMPSELPLGLRFTRTLKREDARDVLILKEGYASIEDLPIGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 I T S RRK LL +RSD++++ RG ++TRL KL K I+LA AG+ RL I Sbjct: 122 TIATGSKRRKYQLLAYRSDLNIVPIRGNVDTRLCKLEEEKLEGIVLAAAGLHRLGLADKI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L +E P+P QGA+ IE + KA +LVKV+ + V ERAF+ ++G C Sbjct: 182 TCYLPMEIMLPAPAQGALAIEIRQEDTKAYDLVKVLEDPVSSIQVEAERAFMDAINGGCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK 271 I + G+ L G++ GK Sbjct: 242 MPIGAYCEVIGTKLRMRGLLGDELGK 267 >gi|254292449|ref|YP_003058472.1| porphobilinogen deaminase [Hirschia baltica ATCC 49814] gi|254040980|gb|ACT57775.1| porphobilinogen deaminase [Hirschia baltica ATCC 49814] Length = 323 Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 109/278 (39%), Positives = 151/278 (54%), Gaps = 13/278 (4%) Query: 7 RIGTRCSPLALAHA--FETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IG R SPLA+ A F R + + + I I +T GD++ ++ L + GGKGLF Sbjct: 22 KIGARGSPLAVQQAEDFAARFKEIVGNTV---EIEIHTFTTSGDQLLDKRLQDAGGKGLF 78 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T E++ +SG ID VHS KD+PT L GLQ+ YLPRED RD ++KDL Sbjct: 79 TRELDIAQLSGRIDIVVHSLKDVPTVLPDGLQMGCYLPREDPRDALFGKVG-NIKDLPHG 137 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT+SLRR A L R D+ ++ FRG ++TRL KL +A A LLA AG+ RL Sbjct: 138 ATLGTASLRRSAQALALRPDLKIVMFRGNVQTRLRKLEEGQADATLLAAAGLNRLGMTDK 197 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS---VNCERAFLAELD 241 + E+ P+ GQG +C T + N + K D +S ERAFL LD Sbjct: 198 AAGFMPKEEMLPACGQGIVC--TTLTNNAEDWIFKACLQIDVLESRIAAIAERAFLKRLD 255 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG--KIFHEVS 277 GSC++ IAG + + G VLA DG + F ++S Sbjct: 256 GSCRTPIAGHLSFNETGVDMRGEVLADDGSKRWFSQMS 293 >gi|159903036|ref|YP_001550380.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9211] gi|238058998|sp|A9BEB6|HEM3_PROM4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|159888212|gb|ABX08426.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9211] Length = 316 Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 108/297 (36%), Positives = 162/297 (54%), Gaps = 9/297 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LA+ + L H P NI I ++T+GD+I + L +IG KGLFT Sbjct: 6 LRIATRRSKLAMVQTHWVKEQLEKAH--PGINISIEAMATQGDKILDVALAKIGDKGLFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH- 124 +E+E +++ G D AVHS KD+PT L +GL + RED D + + +SLKD LH Sbjct: 64 KELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVN--KSLKDKQLHE 121 Query: 125 ----SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 +++GTSSLRR A L + D RG + TRL KL+ ++LA AG+ RL Sbjct: 122 LPPGTILGTSSLRRLAQLRHHYPHLIFKDVRGNLITRLEKLDAGAYDCLILAAAGLTRLG 181 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + +++ E + GQGA+ IE N P+ E++K + HE+T ER+FL EL Sbjct: 182 FGDRVHQLIPCEISLHAVGQGALGIECVENKPEVLEIIKSLEHEETSQRCLSERSFLREL 241 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +G C+ I + G L G+V + DGK + S+ G++ + IG++ A ++ Sbjct: 242 EGGCQVPIGVNSQISGQDLILTGMVASLDGKKLIKDSKRGDKSNPELIGKELANELK 298 >gi|218767661|ref|YP_002342173.1| porphobilinogen deaminase [Neisseria meningitidis Z2491] gi|11386831|sp|Q9JVS4|HEM3_NEIMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|121051669|emb|CAM07972.1| putative porphobilinogen deaminase [Neisseria meningitidis Z2491] Length = 311 Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 104/296 (35%), Positives = 164/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKL 294 >gi|271962120|ref|YP_003336316.1| hydroxymethylbilane synthase [Streptosporangium roseum DSM 43021] gi|270505295|gb|ACZ83573.1| Hydroxymethylbilane synthase [Streptosporangium roseum DSM 43021] Length = 306 Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 102/293 (34%), Positives = 158/293 (53%), Gaps = 7/293 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S +A + + L ++ + ++ ++T GD +T LT++GG G+F Sbjct: 7 PLRLGTRRSLMATTQSGLVAARLTELTG---RAVELVGVTTFGD-VTKANLTQLGGTGVF 62 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + KLI GEID AVHS KD+PT + I+A PR+D RD +S TA+ L DL Sbjct: 63 VSALRDKLIDGEIDFAVHSLKDLPTTQDPRVVIAAIPPRDDPRDALVS-TAK-LADLPAG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S +GT S RR A L R D+ + RG +TR+ K+ + + ++LA AG+ RL +E Sbjct: 121 SKVGTGSPRRIAQLRVLRPDLEYVPIRGNADTRIGKVTSGELQGVVLAAAGLGRLGREAE 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I ++ +E+ P+PGQGA+ +E + E + V++ T +V ERA L L+ C Sbjct: 181 ISQVFEVEEMLPAPGQGALAVECRADRTDLIEFLSVLDDARTRAAVTAERAVLNALEAGC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD-AAQYI 296 + + ++ G L V+A DGK S G +++GRD AA+ I Sbjct: 241 AAPVGAYSADDGQNLILTAAVVAVDGKRAVRKSTAGTLSAPMDLGRDLAAEMI 293 >gi|15676445|ref|NP_273584.1| porphobilinogen deaminase [Neisseria meningitidis MC58] gi|11386833|sp|Q9K0P6|HEM3_NEIMB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|7225764|gb|AAF40968.1| porphobilinogen deaminase [Neisseria meningitidis MC58] gi|254671891|emb|CBA04160.1| Porphobilinogen deaminase [Neisseria meningitidis alpha275] gi|308388723|gb|ADO31043.1| putative porphobilinogen deaminase [Neisseria meningitidis alpha710] gi|316985397|gb|EFV64345.1| porphobilinogen deaminase [Neisseria meningitidis H44/76] gi|319409917|emb|CBY90242.1| porphobilinogen deaminase (PBG; hydroxymethylbilane synthase; HMBS; pre-uroporphyrinogen synthase) [Neisseria meningitidis WUE 2594] gi|325127627|gb|EGC50543.1| porphobilinogen deaminase [Neisseria meningitidis N1568] gi|325139808|gb|EGC62341.1| porphobilinogen deaminase [Neisseria meningitidis CU385] gi|325200773|gb|ADY96228.1| porphobilinogen deaminase [Neisseria meningitidis H44/76] Length = 311 Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 104/296 (35%), Positives = 164/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYTRLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKL 294 >gi|90416175|ref|ZP_01224107.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2207] gi|90331900|gb|EAS47114.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2207] Length = 326 Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 104/295 (35%), Positives = 161/295 (54%), Gaps = 4/295 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RI TR SPLAL A ++ L++ H P ++ ++ ++T+GD + + L ++GGKGL Sbjct: 18 QTIRIATRKSPLALWQAEFVKAKLLENH--PDLDVQLVAMTTRGDVLLDTPLAKVGGKGL 75 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++ D AVHS KD+P + GL ++ RED D F+S+ +L +L Sbjct: 76 FVKELEVAMLENRADIAVHSMKDVPMEFPPGLGLTVICEREDPLDAFVSNRYANLAELPP 135 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+GTSSLRR+ + D+ + D RG + TRL KL+ AI+LA AG+ RL E Sbjct: 136 GSVVGTSSLRRQCQIRAAFPDLQIKDLRGNVNTRLAKLDYGDYDAIILASAGLIRLGMEA 195 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I L E P+ GQGA+ IE +++ EL+K + H T V ERA L+G Sbjct: 196 RIASRLESELCLPAGGQGAVGIECRLDDQATIELLKPLEHSQTRIRVTAERALNRRLEGG 255 Query: 244 CKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ IA +A G +L G+V + DG + + + A +G + A+ + Sbjct: 256 CQVPIACYAELDEAGESLQLRGLVGSVDGSLILQDQLSAPVAQAEQLGIELAERL 310 >gi|170757497|ref|YP_001780553.1| porphobilinogen deaminase [Clostridium botulinum B1 str. Okra] gi|229836107|sp|B1IHD1|HEM3_CLOBK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|169122709|gb|ACA46545.1| porphobilinogen deaminase [Clostridium botulinum B1 str. Okra] Length = 290 Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 104/284 (36%), Positives = 155/284 (54%), Gaps = 4/284 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LA L H I ++I T GD+I +L +IGGKGLF Sbjct: 3 FVIATRRSKLAQVQTEIIIDLLNKKHDIECEKLLI---ETVGDKILEVSLDKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL + Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 S I +A K + ++ GI + I E++ ++ + + I Sbjct: 239 STIGAYASIKDNIMHIIGIFERKNKIIKKEITGTKDQYEKLGIA 282 >gi|324328367|gb|ADY23627.1| porphobilinogen deaminase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 309 Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 114/293 (38%), Positives = 164/293 (55%), Gaps = 10/293 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + +V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDGVTEKTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRL 292 >gi|289642295|ref|ZP_06474444.1| porphobilinogen deaminase [Frankia symbiont of Datisca glomerata] gi|289507930|gb|EFD28880.1| porphobilinogen deaminase [Frankia symbiont of Datisca glomerata] Length = 313 Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 104/304 (34%), Positives = 159/304 (52%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SP+ALA A R+ L ++ P I+P++T GDR T L+ +GGKG FT Sbjct: 9 IRIGTRSSPMALAQAERVRAELTALN--PDLTAEIVPITTSGDRWTG-PLSTLGGKGAFT 65 Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E+++ L++G D AVH KD+P + G +AYLPR+DIRD I ++L L Sbjct: 66 KEVDEALLAGRADLAVHCMKDVPGDRPVPAGTVFAAYLPRDDIRDALIHPGGRTLDQLPA 125 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTS++RR A L + + + RG TRL +L++ A A+LLA +G++R+ + Sbjct: 126 GTRVGTSAVRRIAQLAQSHPHLETVPIRGNANTRLARLDDGAADALLLAVSGLERIGQAG 185 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I EIL+ E P G G + ++ ++ +LV ++ D V ER L L G Sbjct: 186 RITEILSAETMCPPIGAGVLGLQCREDDTDTAQLVAGMDDIDARRQVTAERMLLHVLQGH 245 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG A+ + L V + DGK + G D +G A + + Sbjct: 246 CNSPIAGHAHTEPDGRLSLRAKVFSPDGKTVLDAHEWGPGTDPTTLGASVAVALLRQGAQ 305 Query: 303 NVFN 306 ++ N Sbjct: 306 DLLN 309 >gi|91200437|emb|CAJ73484.1| strongly similar to hydroxymethylbilane synthase (porphobilinogen deaminase) [Candidatus Kuenenia stuttgartiensis] Length = 319 Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 108/298 (36%), Positives = 163/298 (54%), Gaps = 4/298 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 KP +G+R S LAL S L ++ P I +ST GD+IT+ L+ +GG G+ Sbjct: 8 KPIIVGSRGSKLALTQTNWVISELKKLN--PGVEFEIKKISTSGDKITDVPLSRLGGVGV 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E LI +ID AVHSAKD+PT++ + L + A R D DV IS +L+ L Sbjct: 66 FTKELEVALIKEKIDLAVHSAKDIPTEVSEKLTLGAMPKRVDPSDVLISAKNVTLERLPG 125 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++ IGTSSLRRKA LL R D ++D RG ++TRL KL + I++A+AG+ R+ Sbjct: 126 NARIGTSSLRRKAQLLALRPDFEIVDLRGNLDTRLKKLEADDLDGIIVAHAGLIRIGYTG 185 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I EI+ E P+ GQG++ IE ++ + +++ ++ T +V ERA LA+L G Sbjct: 186 QISEIIPFEIMLPAVGQGSLGIEIRKDDERINKILSKMDDLHTRIAVEAERALLAKLQGG 245 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ I A ++ ++ DG+ S G A +G + AQ R + N Sbjct: 246 CQVPIGAHAKVLNDEVHLEAVICTLDGERTIRDSHKGPANQAAAVGNELAQ--RMLDN 301 >gi|329119508|ref|ZP_08248193.1| hydroxymethylbilane synthase [Neisseria bacilliformis ATCC BAA-1200] gi|327464441|gb|EGF10741.1| hydroxymethylbilane synthase [Neisseria bacilliformis ATCC BAA-1200] Length = 317 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 105/291 (36%), Positives = 162/291 (55%), Gaps = 2/291 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A ++ L ++ P +I I+ L+T+GD+I +RTL++IGGKGLF Sbjct: 7 LTIASRQSALAMWQAEHIKARLHALY--PACDIRILGLTTRGDQILDRTLSKIGGKGLFI 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L G D AVHS KD+P +L +G ++A R D F+S+ +L L + Sbjct: 65 KELEQALHDGRADLAVHSIKDVPMELPEGFLLAAIGERASPFDAFVSNRHNTLAALPAGA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+A + ++V RG ++TRL KL+N + AI+LA AG++RL I Sbjct: 125 VVGTSSLRREAQIRARHPHLTVKPLRGNVQTRLAKLDNGEYDAIILAAAGLQRLGLNGRI 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +EIL+ ++ P+ GQGA+ IE + L+ +NH +T V ER L GSC+ Sbjct: 185 REILSPDECLPAAGQGALGIEIAEHRSDLLPLLAPLNHAETAACVTAERTLAQALGGSCQ 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +A + L G+V DG + E + A +GR A+ + Sbjct: 245 IPLAAYCTSDEGLLTLRGLVGHPDGSVLIEAAAQAPAAYARTLGRAVAKRL 295 >gi|229918358|ref|YP_002887004.1| porphobilinogen deaminase [Exiguobacterium sp. AT1b] gi|259647797|sp|C4L4J6|HEM3_EXISA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|229469787|gb|ACQ71559.1| porphobilinogen deaminase [Exiguobacterium sp. AT1b] Length = 305 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 99/291 (34%), Positives = 170/291 (58%), Gaps = 7/291 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHN-IVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +G+R S LA+ +T+ + + + N I + TKGD+I + L+++GGKGLF + Sbjct: 6 VGSRRSQLAMT---QTKWVIEQLKQAGATNEFEIKEIVTKGDQIVDVQLSKVGGKGLFVK 62 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EI+++++ G+ID AVHS KD+P +L + L IS R D RDV I + + L S+ Sbjct: 63 EIQQQMLDGDIDFAVHSMKDVPAELPEELYISCMPKRVDARDVLICENGYTFETLPKGSI 122 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVI 185 +GTSSLRR A +L R D+ + RG I+TRL KL++ +AILLA AG++R+ ++V Sbjct: 123 VGTSSLRRGAQILAARPDLEIQWIRGNIDTRLKKLDSENYNAILLAKAGLERMGWTDRVD 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ + P+ GQG + IE+ ++ + ++++++ + T + ER FL ++GSC Sbjct: 183 FEALDPDVMVPAVGQGVLAIESRKDDAEVTTVLQLLHDDVTAKAATAERTFLKAIEGSCH 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + G+A G + G++ + DGK V++ D + +G+ A+ + Sbjct: 243 VPVGGYATVNGDDVTLTGLIASVDGKEVLRVTKTST--DGVALGQAVAEEL 291 >gi|332981813|ref|YP_004463254.1| porphobilinogen deaminase [Mahella australiensis 50-1 BON] gi|332699491|gb|AEE96432.1| porphobilinogen deaminase [Mahella australiensis 50-1 BON] Length = 292 Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 101/269 (37%), Positives = 149/269 (55%), Gaps = 3/269 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+G+R S LALA S+L ++ P + + T+GDR+ + + IG KG+F Sbjct: 4 IRVGSRGSRLALAQTDAVISALRSLY--PDIDFERQIVKTEGDRLQHIPVERIGDKGIFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE+ L+ G ID AVHS KD+P++L GL I A RED RD FIS ++++ L + Sbjct: 62 KDIEQALMDGHIDMAVHSMKDVPSQLPDGLMIGAMPWREDPRDAFISSDGRTIEQLGCRA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IG S RR A L I ++ RG I+TR+NK+N I+LA AG+KRL VI Sbjct: 122 RIGIGSARRSAQLKNCFPGIDIVAIRGNIDTRINKINEAGLDGIVLAVAGLKRLGVSDVI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +IL ++ P+ GQGA+ IE ++ KA +L+ +NH T +V+ ER F+A + G C Sbjct: 182 TQILPVDVCTPAAGQGALGIEIRKSDEKAADLLMPLNHAPTRAAVDAERMFMAMMGGDCN 241 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFH 274 + I + G + V DG I Sbjct: 242 TPIGVYGEVDGVDILLRAAV-EKDGCIMR 269 >gi|251778553|ref|ZP_04821473.1| hydroxymethylbilane synthase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082868|gb|EES48758.1| hydroxymethylbilane synthase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 290 Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 109/289 (37%), Positives = 160/289 (55%), Gaps = 6/289 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LA S L I ++I+ T+GDR + +L +IGGKGLF ++ Sbjct: 6 IATRKSKLAQVQTEIIMSELKSKFNIDSKKLLIV---TEGDRKLDVSLNKIGGKGLFVKD 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE L++ E AVHS KD+P ++ +I+A REDIRDVFIS+ S KD+ + + Sbjct: 63 IELALLNKEAHAAVHSMKDVPFEVSSEFEITAITGREDIRDVFISNGDISFKDIKKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSS+RR A L RSD+ ++ RG ++TRL K+ I+LA AG+KRL + +I + Sbjct: 123 GTSSIRRAAQLKLLRSDLEIVPIRGNVQTRLKKMEEQNLDGIVLAAAGLKRLGDKNLITD 182 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + ++F P+ QGA+ IE + + +I+ E T +V ER+F+ EL G C S Sbjct: 183 YFDPKEFLPAVSQGALGIECLKDGDANKYFEALIDAEATL-TVEAERSFMKELQGDCHSL 241 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I ++ KG LY GI GKI + G + + I +G+ AQ I Sbjct: 242 IGAYSEIKGDDLYMIGIYDIG-GKIVKK-DILGCKTNNIELGKKLAQKI 288 >gi|226948193|ref|YP_002803284.1| hydroxymethylbilane synthase [Clostridium botulinum A2 str. Kyoto] gi|254800244|sp|C1FVB9|HEM3_CLOBJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226840754|gb|ACO83420.1| hydroxymethylbilane synthase [Clostridium botulinum A2 str. Kyoto] Length = 290 Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 104/283 (36%), Positives = 155/283 (54%), Gaps = 4/283 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LA L H I ++I T GD+I +L +IGGKGLF Sbjct: 3 FVIATRRSKLAQVQTEIIIDLLNKKHDIECEKLLI---ETVGDKILEVSLDKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL + Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 S I +A K + ++ GI + I E++ ++ + + I Sbjct: 239 STIGAYASIKDNIMHIIGIFERKNKIIKKEITGTKDQYEKLGI 281 >gi|42783601|ref|NP_980848.1| porphobilinogen deaminase [Bacillus cereus ATCC 10987] gi|55976457|sp|Q72ZW2|HEM3_BACC1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|42739530|gb|AAS43456.1| porphobilinogen deaminase [Bacillus cereus ATCC 10987] Length = 309 Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 114/293 (38%), Positives = 164/293 (55%), Gaps = 10/293 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + +V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDGVTEKTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRL 292 >gi|228993205|ref|ZP_04153126.1| Porphobilinogen deaminase [Bacillus pseudomycoides DSM 12442] gi|228999254|ref|ZP_04158834.1| Porphobilinogen deaminase [Bacillus mycoides Rock3-17] gi|229006801|ref|ZP_04164434.1| Porphobilinogen deaminase [Bacillus mycoides Rock1-4] gi|228754423|gb|EEM03835.1| Porphobilinogen deaminase [Bacillus mycoides Rock1-4] gi|228760451|gb|EEM09417.1| Porphobilinogen deaminase [Bacillus mycoides Rock3-17] gi|228766531|gb|EEM15173.1| Porphobilinogen deaminase [Bacillus pseudomycoides DSM 12442] Length = 309 Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 110/270 (40%), Positives = 152/270 (56%), Gaps = 8/270 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L+ EID AVHS KDMP L GL I R D RD FIS +S +DLA + Sbjct: 62 KEIEHALLMKEIDMAVHSMKDMPAVLPDGLTIGCIPKRVDPRDAFISKNGESFEDLAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDDV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDADLLQLLSHMNDAVTERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFAYC-KGSTLYFYGIVLASDGKIF 273 + IAG+A K + +V + DG + Sbjct: 242 QVPIAGYATLQKNDEIELTALVGSMDGSVL 271 >gi|332798468|ref|YP_004459967.1| Porphobilinogen deaminase [Tepidanaerobacter sp. Re1] gi|332696203|gb|AEE90660.1| Porphobilinogen deaminase [Tepidanaerobacter sp. Re1] Length = 293 Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 102/263 (38%), Positives = 148/263 (56%), Gaps = 4/263 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK ++G+R S LAL S L + P + +I + T GD+ N + E+G KG Sbjct: 2 KKIVKVGSRQSQLALVQTELVISQLKE--HFPQWDFKLITVKTTGDKFLNSNMYELG-KG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 F +EIE+ L+SG ID AVHS KD+P +L +GL ISA RED RDVFIS + +L Sbjct: 59 AFVKEIEEALLSGAIDMAVHSLKDVPHELPEGLAISAITRREDPRDVFISADDRRFSELD 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IGTSS+RR L + R DI + RG I TR+ K+ I+LA AG+KRL E Sbjct: 119 TGAKIGTSSMRRMCELNKLRQDIECVPIRGNINTRIKKIKTCGLDGIVLAAAGVKRLGME 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +I + + ++ P+ GQGA+ +ET ++ + VK IN ++T + ERAF+ + G Sbjct: 179 NLITDYFSPDEIVPAVGQGALAVETRADDEMSL-FVKYINDDETTCATGAERAFMKVVGG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIV 265 SCK + +A L G++ Sbjct: 238 SCKQPMGAYAEIFDDALKLIGMI 260 >gi|116622285|ref|YP_824441.1| porphobilinogen deaminase [Candidatus Solibacter usitatus Ellin6076] gi|116225447|gb|ABJ84156.1| hydroxymethylbilane synthase [Candidatus Solibacter usitatus Ellin6076] Length = 297 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 116/283 (40%), Positives = 149/283 (52%), Gaps = 11/283 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LAL A + L H I + T GD+IT+ L ++G KGLFT+E Sbjct: 4 IASRGSQLALWQAHWVEAQLQAAG----HECRIEIIKTTGDKITDVPLAKVGTKGLFTKE 59 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ L+ G AVHS KD+PT+L +GL + A RED RD I T L +L L + + Sbjct: 60 IEEALLDGRAQLAVHSLKDLPTELPEGLVLGAVPKREDPRDAVIGKT---LAELPLGAKV 116 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR A L R R D+ V RG ++TRL KL+ + AILLA AG+KRL I E Sbjct: 117 GTSSLRRSAQLKRLRPDLVVESIRGNLDTRLRKLDEGQYDAILLAAAGMKRLGWGARIAE 176 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 IL + P+ GQGA+ IET L V+NH DT +V ER L L G C+ Sbjct: 177 ILPPDLMCPAVGQGALAIETRAGF----VLPAVLNHADTHTAVLAERGLLGALGGGCQVP 232 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 I A G + G+V A DG G +A IG+ Sbjct: 233 IGAHATVAGGRVRLLGLVAAPDGSEIVRAEAEGASGEAAEIGK 275 >gi|212703312|ref|ZP_03311440.1| hypothetical protein DESPIG_01355 [Desulfovibrio piger ATCC 29098] gi|212673272|gb|EEB33755.1| hypothetical protein DESPIG_01355 [Desulfovibrio piger ATCC 29098] Length = 311 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 109/305 (35%), Positives = 159/305 (52%), Gaps = 3/305 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K I TR S LAL A ++ L + P NI + + T+GD I + L+++GGKG Sbjct: 2 RKNLVIATRGSQLALWQAEHVKACLESLE--PGLNISLRVIKTRGDIILDVPLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L+ G D AVHS KD+P L +GL + RE D +S+ SL +L Sbjct: 60 LFVKEIEEALLDGSADLAVHSIKDVPMVLPEGLVLGCVPQREICVDCLLSNRYGSLDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR+A LL R D+ ++ RG ++TRL K+ + AI+LA AG+KRL Sbjct: 120 PGARVGTSSLRRQAQLLNLRPDLEILSLRGNVDTRLRKMKEGEYDAIVLASAGLKRLGLS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 F P+ GQGA+ IE ++ + EL+ + H T V ER FLA LDG Sbjct: 180 ADRMHHFEAASFVPAVGQGALGIECRGDDGEVLELLSRMEHRPTRICVEAERGFLAGLDG 239 Query: 243 SCKSAIAGFAYCKGSTLYFY-GIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG A + G+V DG + + G A G A+++ Sbjct: 240 GCQVPIAGHAEMLDDDRFILDGLVAEVDGSVILREQQEGTAATARETGFALARHLLDKGG 299 Query: 302 KNVFN 306 K++ + Sbjct: 300 KDILD 304 >gi|301055971|ref|YP_003794182.1| porphobilinogen deaminase [Bacillus anthracis CI] gi|300378140|gb|ADK07044.1| porphobilinogen deaminase [Bacillus cereus biovar anthracis str. CI] Length = 309 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 114/293 (38%), Positives = 164/293 (55%), Gaps = 10/293 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGVPFKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ ++V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVG--IDPKEVGLEAADRL 292 >gi|315658068|ref|ZP_07910940.1| hydroxymethylbilane synthase [Staphylococcus lugdunensis M23590] gi|315496397|gb|EFU84720.1| hydroxymethylbilane synthase [Staphylococcus lugdunensis M23590] Length = 310 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 106/306 (34%), Positives = 176/306 (57%), Gaps = 11/306 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + L +++ P I I + TKGD+I ++ L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQSKQFIDKLKEIN--PDLEIEIKEIVTKGDQILDKQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+ +L + EID A+HS KD+P+ L +GL + RE+ D +I+ L L S++ Sbjct: 64 IQHELFNKEIDFAIHSLKDVPSILPEGLTLGCIPDRENPFDAYIAKNHTPLDQLPDGSIV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L ++ + RG I+TRL+KL AI+LA AG+KR+ + ++ Sbjct: 124 GTSSLRRGAQILAKYPNLEIKWIRGNIDTRLHKLETENYDAIILAAAGLKRMGWSDDIVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ + P+ GQGA+ IE ++ + L+ ++++ D V ER FLA +DGSC+ Sbjct: 184 TYLDKDVLLPAIGQGALGIECRSDDVELLALLNQVHNQQVADCVTAERTFLAAMDGSCQV 243 Query: 247 AIAGFAYCK-GSTLYFYGIVLASDGKIFH---EVSRN----GNRCDAINIGRDAAQYIRF 298 I G+A K + F G+++ DGK + E+ N GN+ + I + A + IR Sbjct: 244 PIGGYATNKTNGDIEFTGLIMTPDGKERYEHTEIGNNPIELGNKVSDVLIEQGAYEIIRK 303 Query: 299 ISNKNV 304 ++++ + Sbjct: 304 LNDQQL 309 >gi|296268254|ref|YP_003650886.1| porphobilinogen deaminase [Thermobispora bispora DSM 43833] gi|296091041|gb|ADG86993.1| porphobilinogen deaminase [Thermobispora bispora DSM 43833] Length = 303 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 97/292 (33%), Positives = 154/292 (52%), Gaps = 6/292 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S +A + + L ++ ++T GD ++ LT++GG G+F Sbjct: 4 PLRLGTRKSLMATSQSRRVAERLAQATG---RRSELVGITTFGD-VSRAHLTQLGGTGVF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 E+ LI+GE+D AVHS KD+PTK + I+A PR+D RD F+ +L Sbjct: 60 VSELRNALIAGEVDFAVHSLKDLPTKGDDRIVIAAIPPRDDPRDAFVGRV--PFSELPPG 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT S RR A L R D+ + RG +TRL K+ + + I+LA AG+ R+ +E+ Sbjct: 118 ARVGTGSPRRIAQLRMLRPDLEYVPIRGNADTRLGKVTSGELDGIVLAAAGLGRIGREEA 177 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I ++ +E P+PGQGA+ +E + EL+ I+ T D+V ER+ LA L+ C Sbjct: 178 IAQVFEVEQVLPAPGQGALAVECRADRADLIELLSAIDDRATRDAVTAERSVLAALEAGC 237 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A G+ L V++ DG+ S +G A+ +GRD A + Sbjct: 238 AAPVGAHASGDGNVLSLTAAVVSVDGRRSVRKSVSGPASAAMELGRDLAAAM 289 >gi|27468263|ref|NP_764900.1| porphobilinogen deaminase [Staphylococcus epidermidis ATCC 12228] gi|57867145|ref|YP_188808.1| porphobilinogen deaminase [Staphylococcus epidermidis RP62A] gi|251811065|ref|ZP_04825538.1| hydroxymethylbilane synthase [Staphylococcus epidermidis BCM-HMP0060] gi|282875909|ref|ZP_06284776.1| hydroxymethylbilane synthase [Staphylococcus epidermidis SK135] gi|293366381|ref|ZP_06613060.1| hydroxymethylbilane synthase [Staphylococcus epidermidis M23864:W2(grey)] gi|38258087|sp|Q8CNY8|HEM3_STAES RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|71152115|sp|Q5HNN3|HEM3_STAEQ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|27315809|gb|AAO04944.1|AE016748_178 porphobilinogen deaminase [Staphylococcus epidermidis ATCC 12228] gi|57637803|gb|AAW54591.1| porphobilinogen deaminase [Staphylococcus epidermidis RP62A] gi|251805400|gb|EES58057.1| hydroxymethylbilane synthase [Staphylococcus epidermidis BCM-HMP0060] gi|281294934|gb|EFA87461.1| hydroxymethylbilane synthase [Staphylococcus epidermidis SK135] gi|291319506|gb|EFE59873.1| hydroxymethylbilane synthase [Staphylococcus epidermidis M23864:W2(grey)] gi|329733769|gb|EGG70095.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU045] gi|329737359|gb|EGG73613.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU028] Length = 308 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 102/294 (34%), Positives = 172/294 (58%), Gaps = 10/294 (3%) Query: 8 IGTRCSPLALAHA--FETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + F + +D P +I I + TKGD+I ++ L+++GGKGLF Sbjct: 6 VGSRRSKLALTQSQQFIDKLKFID----PSLDIEIKEIVTKGDKIVDKQLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EI+ +L + EID A+HS KD+P+ + GL + RE D +I+ L++L+ S Sbjct: 62 KEIQNELFNKEIDMAIHSLKDVPSMIPDGLTLGCIPDREIPFDAYIAKNHIPLQELSEGS 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 ++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ + + Sbjct: 122 IVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDNI 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + L+ + P+ GQGA+ IE ++ + +L+ +++ D V ER FL+E+DGSC Sbjct: 182 VTTYLDRDILLPAIGQGALGIECRSDDKELLDLLSKVHNHDVAQCVTAERTFLSEMDGSC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + I G+A + + + F G++++ DGK +E + G D + +G + +Q ++ Sbjct: 242 QVPIGGYATIAQDNQIEFTGLIMSPDGKERYEHTALGT--DPVKLGIEVSQVLK 293 >gi|255004322|ref|ZP_05279123.1| porphobilinogen deaminase [Anaplasma marginale str. Virginia] Length = 303 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 100/289 (34%), Positives = 159/289 (55%), Gaps = 2/289 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M R+GTR S LAL A E ++++ + P + + + T GD +R L +IGG Sbjct: 1 MHAPVVRLGTRGSTLALIQAEEVKAAI--AARFPEVRVDVTKIKTSGDVKVDRPLCDIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L++ +ID AVHSAKD+P + L + L R DVFIS +SL Sbjct: 59 KGLFIKEIEEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSS+RRK LL +R D+ + RG ++TR+ K+ + + I+LA AG+ R+ Sbjct: 119 LPAGAKIGTSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRIS 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E+L+ + + GQGAIC++ ++ ++ +N +++ +V ER+F+ + Sbjct: 179 ARAKITEVLHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAV 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +GSC + +A A S L +LA D + R DA ++G Sbjct: 239 NGSCHTPLAAMARYVDSGLMSMKCMLAHDSRTMVFAERTFPERDAESVG 287 >gi|222475216|ref|YP_002563632.1| porphobilinogen deaminase (hemC) [Anaplasma marginale str. Florida] gi|255003192|ref|ZP_05278156.1| porphobilinogen deaminase [Anaplasma marginale str. Puerto Rico] gi|269958734|ref|YP_003328521.1| porphobilinogen deaminase [Anaplasma centrale str. Israel] gi|222419353|gb|ACM49376.1| porphobilinogen deaminase (hemC) [Anaplasma marginale str. Florida] gi|269848563|gb|ACZ49207.1| porphobilinogen deaminase [Anaplasma centrale str. Israel] Length = 303 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 99/283 (34%), Positives = 157/283 (55%), Gaps = 2/283 (0%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 R+GTR S LAL A E ++++ P + + + T GD +R L +IGGKGLF + Sbjct: 7 RLGTRGSTLALIQAEEVKAAI--AAHFPEVRVDVTKIKTSGDVKVDRPLCDIGGKGLFIK 64 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE+ L++ +ID AVHSAKD+P + L + L R DVFIS +SL L + Sbjct: 65 EIEEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNSLPAGAK 124 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGTSS+RRK LL +R D+ + RG ++TR+ K+ + + I+LA AG+ R+ I Sbjct: 125 IGTSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRISARAKIT 184 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E+L+ + + GQGAIC++ ++ ++ +N +++ +V ER+F+ ++GSC + Sbjct: 185 EVLHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAVNGSCHT 244 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +A A S L +LA D + R DA ++G Sbjct: 245 PLAAMARYVDSGLMSMKCMLAHDSRTMVSAERTFPERDAESVG 287 >gi|30022552|ref|NP_834183.1| porphobilinogen deaminase [Bacillus cereus ATCC 14579] gi|218235229|ref|YP_002369271.1| porphobilinogen deaminase [Bacillus cereus B4264] gi|229129756|ref|ZP_04258723.1| Porphobilinogen deaminase [Bacillus cereus BDRD-Cer4] gi|229152666|ref|ZP_04280854.1| Porphobilinogen deaminase [Bacillus cereus m1550] gi|296504955|ref|YP_003666655.1| porphobilinogen deaminase [Bacillus thuringiensis BMB171] gi|39931461|sp|Q817R0|HEM3_BACCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226740629|sp|B7HE96|HEM3_BACC4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|29898110|gb|AAP11384.1| Porphobilinogen deaminase [Bacillus cereus ATCC 14579] gi|218163186|gb|ACK63178.1| hydroxymethylbilane synthase [Bacillus cereus B4264] gi|228630812|gb|EEK87453.1| Porphobilinogen deaminase [Bacillus cereus m1550] gi|228653672|gb|EEL09543.1| Porphobilinogen deaminase [Bacillus cereus BDRD-Cer4] gi|296326007|gb|ADH08935.1| porphobilinogen deaminase [Bacillus thuringiensis BMB171] Length = 309 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 110/270 (40%), Positives = 153/270 (56%), Gaps = 8/270 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-V 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNDV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G C Sbjct: 182 ITEHLDDTLCVPAVGQGALAIECREDDKDLLQLLAHINDTITERTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIF 273 + IAG+A + + +V + DG + Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVL 271 >gi|172039291|ref|YP_001805792.1| porphobilinogen deaminase [Cyanothece sp. ATCC 51142] gi|171700745|gb|ACB53726.1| porphobilinogen deaminase [Cyanothece sp. ATCC 51142] Length = 331 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 104/297 (35%), Positives = 161/297 (54%), Gaps = 5/297 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + + L + P + +ST+GD+I + L +IG KGL Sbjct: 20 RTIRIGSRKSQLALVQTYWIQEELQKHY--PDRQFDVETMSTQGDKILDVALAKIGDKGL 77 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120 FT+E+E ++ ++D AVHS KD+PT L +GL + R + D + +H + L Sbjct: 78 FTKELETAMLQNQVDFAVHSLKDLPTNLPEGLMLGCVTERVNPADALVVNETHQDKQLDT 137 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SVIGTSSLRR A L ++ D RG + TRL+KL+ + AI+LA AG++RL Sbjct: 138 LPEGSVIGTSSLRRLAQLRHHYPHLTFKDVRGNVNTRLSKLDAGEYDAIILAVAGLQRLD 197 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ + + GQGA+ IE +P+ +L+KV+ H +T D ERAFL +L Sbjct: 198 MSDRIHQVIPDDISLHAVGQGALGIECRSGDPEILDLLKVLEHTETRDRCYAERAFLRQL 257 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +G C+ I + + L G+V + DGK + + G A +G + A +R Sbjct: 258 EGGCQVPIGVNTKIENNILTLTGMVASLDGKTLIKDTIQGEAAQAEKLGEELALRLR 314 >gi|145588841|ref|YP_001155438.1| porphobilinogen deaminase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047247|gb|ABP33874.1| porphobilinogen deaminase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 325 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 97/264 (36%), Positives = 153/264 (57%), Gaps = 2/264 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R L ++ P ++ I+ ++T+GD+I +R L+++GGKGLF +E Sbjct: 22 IASRESRLAMWQAEHVRDCLKSLY--PQCDVQILGMTTRGDQILDRALSKVGGKGLFVKE 79 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G AVHS KD+P + +G ++ + RED RD F+S+ SL++L +V+ Sbjct: 80 LETALEDGRAHLAVHSLKDVPMVMPEGFDLACVMAREDARDAFVSNDYASLEELPKGAVV 139 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V RG ++TR+ KL+ + AI+LA AG+KRL E I+ Sbjct: 140 GTSSLRREAVLRAKFPHLEVHPLRGNLDTRMGKLDRGEYQAIILAAAGLKRLGLESRIRA 199 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 L + + P+ GQGA+ IET +P + + +N T +V+ ER +L GSC+ Sbjct: 200 YLPYDPYTPAAGQGALGIETLSKHPSIKHWLAPLNDLPTLLAVSAERMVSRQLGGSCEVP 259 Query: 248 IAGFAYCKGSTLYFYGIVLASDGK 271 +A A + + V + DGK Sbjct: 260 LAAHAVWDNNQMNIRSFVASVDGK 283 >gi|254251705|ref|ZP_04945023.1| Porphobilinogen deaminase [Burkholderia dolosa AUO158] gi|124894314|gb|EAY68194.1| Porphobilinogen deaminase [Burkholderia dolosa AUO158] Length = 333 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 109/298 (36%), Positives = 167/298 (56%), Gaps = 8/298 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 19 LTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFV 76 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L + Sbjct: 77 KELENALADGRADLAVHSLKDVPMALPDGFSLAAIMTREDPRDAFVSNDYASLDALPAGA 136 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+A+L ++V+ RG ++TRL KL+ AI+LA AG+KRL E I Sbjct: 137 VVGTSSLRREAMLRARYPHLNVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARI 196 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + +L ++D PP+ GQGA+ IE + + ++ T +V ER L GSC+ Sbjct: 197 RALLAVDDSPPAAGQGALGIEIASHRTDVAAWLAPLHDPQTALAVEAERMVSRALGGSCE 256 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 +A A + LY G V +DG ++ + C A+ DA R +S++ Sbjct: 257 VPLAAHAVWRAGELYLTGRVSTTDGTRVL-----TADACAAVISVADALALGRAVSDE 309 >gi|257465835|ref|ZP_05630146.1| porphobilinogen deaminase [Fusobacterium gonidiaformans ATCC 25563] gi|315916992|ref|ZP_07913232.1| porphobilinogen deaminase [Fusobacterium gonidiaformans ATCC 25563] gi|313690867|gb|EFS27702.1| porphobilinogen deaminase [Fusobacterium gonidiaformans ATCC 25563] Length = 299 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 108/298 (36%), Positives = 165/298 (55%), Gaps = 6/298 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL--TEI 58 M K+ +G+R S LALA + L H P + I + T+GD+ + ++ Sbjct: 1 MSKQQIILGSRGSILALAQTNWVKEQLEKYH--PELSFSIQIIETQGDKDLHSHFGNSQS 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 K FT+EIEK L+ GEID AVHS KD+P+ GL A RED+RDV IS + + L Sbjct: 59 SLKSFFTKEIEKSLLEGEIDIAVHSMKDVPSVSPAGLICGAIPIREDVRDVLISRSGKPL 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L ++IGTSSLRR + + R D+ + RG I TRL KL + AI+LA AG+KR Sbjct: 119 AELPQGAIIGTSSLRRIQNIKKIRPDLEIKALRGNIHTRLRKLEEEQYDAIILAAAGLKR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 +K E+ I E L+ FPP+P QGA+ I+ + + Q++++ I++E+ + ER F Sbjct: 179 VKLEEKITEYLDPTIFPPAPAQGALYIQCREKDTEVQKILQSIHNENLEKVLVVEREFSK 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 DG C + + ++ +G TL F+ + + + +V N ++ +I R AAQ I Sbjct: 239 IFDGGCHTPMGCYSNLQGDTLEFFAMYSHENKRYQTKVVENLSKGK--DIARMAAQEI 294 >gi|148378912|ref|YP_001253453.1| porphobilinogen deaminase [Clostridium botulinum A str. ATCC 3502] gi|153934281|ref|YP_001383295.1| porphobilinogen deaminase [Clostridium botulinum A str. ATCC 19397] gi|153936114|ref|YP_001386843.1| porphobilinogen deaminase [Clostridium botulinum A str. Hall] gi|166201502|sp|A7FSG8|HEM3_CLOB1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166201503|sp|A5I0B2|HEM3_CLOBH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|148288396|emb|CAL82473.1| porphobilinogen deaminase [Clostridium botulinum A str. ATCC 3502] gi|152930325|gb|ABS35825.1| porphobilinogen deaminase [Clostridium botulinum A str. ATCC 19397] gi|152932028|gb|ABS37527.1| hydroxymethylbilane synthase [Clostridium botulinum A str. Hall] Length = 290 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 103/283 (36%), Positives = 155/283 (54%), Gaps = 4/283 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LA L H I ++I T GD+I +L +IGGKGLF Sbjct: 3 FVIATRRSKLAQVQTEIIIDLLNKKHDIECEKLLI---ETVGDKILEVSLDKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL + Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L R D+ ++ RG ++TR+ K+ ++LA AG+KR+ + +I Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGVILAVAGLKRVNLDHLI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 S I +A K + ++ GI + I E++ ++ + + I Sbjct: 239 STIGAYASIKDNIMHIIGIFERKNKIIKKEITGTKDQYEKLGI 281 >gi|329724698|gb|EGG61204.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU144] Length = 308 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 102/294 (34%), Positives = 172/294 (58%), Gaps = 10/294 (3%) Query: 8 IGTRCSPLALAHA--FETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + F + +D P +I I + TKGD+I ++ L+++GGKGLF Sbjct: 6 VGSRRSKLALTQSQQFIDKLKFID----PSLDIEIKEIVTKGDKIVDKQLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EI+ +L + EID A+HS KD+P+ + GL + RE D +I+ L++L+ S Sbjct: 62 KEIQNELFNKEIDMAIHSLKDVPSMIPDGLTLGCIPDREIPFDAYIAKNHIPLQELSEGS 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 ++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ + + Sbjct: 122 IVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRIGWSDNI 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + L+ + P+ GQGA+ IE ++ + +L+ +++ D V ER FL+E+DGSC Sbjct: 182 VTTYLDRDILLPAIGQGALGIECRSDDKELLDLLSKVHNHDVAQCVTAERTFLSEMDGSC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + I G+A + + + F G++++ DGK +E + G D + +G + +Q ++ Sbjct: 242 QVPIGGYATIAQDNQIEFTGLIMSPDGKERYEHTALGT--DPVKLGIEVSQVLK 293 >gi|167585805|ref|ZP_02378193.1| porphobilinogen deaminase [Burkholderia ubonensis Bu] Length = 328 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 108/294 (36%), Positives = 163/294 (55%), Gaps = 5/294 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 14 LTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFV 71 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L + Sbjct: 72 KELENALADGRADLAVHSLKDVPMALPDGFSLAAIMTREDPRDAFVSNDYASLDALPAGA 131 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL + I Sbjct: 132 VVGTSSLRREAMLRARYPHLQVQPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLDARI 191 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ ++D PP+ GQGA+ IE + + ++ T +V ER L GSC+ Sbjct: 192 RALIGVDDSPPAAGQGALGIEIASHRADVAAWLAPLHDHATALAVEAERMVSRALGGSCE 251 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK---IFHEVSRNGNRCDAINIGRDAAQYI 296 +A A + LY G V +DGK E + DA+ +GR A + Sbjct: 252 VPLAAHAVWRAGELYLTGRVSTTDGKRVLTSEECASVMTVADALALGRAVADAL 305 >gi|170759533|ref|YP_001786306.1| porphobilinogen deaminase [Clostridium botulinum A3 str. Loch Maree] gi|238058921|sp|B1KY15|HEM3_CLOBM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|169406522|gb|ACA54933.1| hydroxymethylbilane synthase [Clostridium botulinum A3 str. Loch Maree] Length = 290 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 103/284 (36%), Positives = 155/284 (54%), Gaps = 4/284 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LA L H I ++I T GD+I +L +IGGKGLF Sbjct: 3 FIIATRRSKLAQVQTEIIIDLLNKKHDIECEKLLI---ETVGDKILEVSLDKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL + Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLREGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 S I +A K + ++ GI + + E++ ++ + + I Sbjct: 239 STIGAYASIKDNIMHIIGIFERKNKIVKKEITGTKDQYEKLGIA 282 >gi|254977043|ref|ZP_05273515.1| porphobilinogen deaminase [Clostridium difficile QCD-66c26] gi|255094370|ref|ZP_05323848.1| porphobilinogen deaminase [Clostridium difficile CIP 107932] gi|255316123|ref|ZP_05357706.1| porphobilinogen deaminase [Clostridium difficile QCD-76w55] gi|255518784|ref|ZP_05386460.1| porphobilinogen deaminase [Clostridium difficile QCD-97b34] gi|255651962|ref|ZP_05398864.1| porphobilinogen deaminase [Clostridium difficile QCD-37x79] gi|260684926|ref|YP_003216211.1| porphobilinogen deaminase [Clostridium difficile CD196] gi|260688584|ref|YP_003219718.1| porphobilinogen deaminase [Clostridium difficile R20291] gi|306521710|ref|ZP_07408057.1| porphobilinogen deaminase [Clostridium difficile QCD-32g58] gi|260211089|emb|CBA66474.1| porphobilinogen deaminase [Clostridium difficile CD196] gi|260214601|emb|CBE07178.1| porphobilinogen deaminase [Clostridium difficile R20291] Length = 301 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 102/265 (38%), Positives = 149/265 (56%), Gaps = 3/265 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LAL + L K P + I + TKGD I N +L +IG KGLF +E Sbjct: 5 VGTRGSTLALIQTEWVINELK--KKYPEISFEIKIIKTKGDLIQNVSLDKIGDKGLFVKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLALHSV 126 IE++L+ G+ID AVHS KDMP+ L GL+ + RED RDV I ++L DL +V Sbjct: 63 IEQQLLDGKIDIAVHSMKDMPSYLADGLKFAHTPKREDPRDVLILREGYKNLDDLPHGAV 122 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGT S RRK LL+ R D++++ RG +ETR+ K+ + H I+LA +GI R + I Sbjct: 123 IGTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDKIS 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L ++ P+P QGA+ IE N+ + +V + E+T + ER FL ++GSC Sbjct: 183 SYLPVDVVIPAPAQGALAIEIRSNDSTIEGIVNSLKDENTEIQILAERGFLDGVNGSCHI 242 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGK 271 +A + ++ G+ S+GK Sbjct: 243 PMAAYCEIIQDKIHLTGLYGDSEGK 267 >gi|206976024|ref|ZP_03236934.1| porphobilinogen deaminase [Bacillus cereus H3081.97] gi|217961956|ref|YP_002340526.1| porphobilinogen deaminase [Bacillus cereus AH187] gi|222097910|ref|YP_002531967.1| porphobilinogen deaminase [Bacillus cereus Q1] gi|229141205|ref|ZP_04269744.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST26] gi|229198593|ref|ZP_04325295.1| Porphobilinogen deaminase [Bacillus cereus m1293] gi|226740630|sp|B7HQM4|HEM3_BACC7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800234|sp|B9IZ39|HEM3_BACCQ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|206745776|gb|EDZ57173.1| porphobilinogen deaminase [Bacillus cereus H3081.97] gi|217066883|gb|ACJ81133.1| porphobilinogen deaminase [Bacillus cereus AH187] gi|221241968|gb|ACM14678.1| porphobilinogen deaminase [Bacillus cereus Q1] gi|228584875|gb|EEK42991.1| Porphobilinogen deaminase [Bacillus cereus m1293] gi|228642246|gb|EEK98538.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST26] Length = 309 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 114/293 (38%), Positives = 163/293 (55%), Gaps = 10/293 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 ++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + +V Sbjct: 122 ILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNEV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDGVTEKTVAAERVFLHKLEGGC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + IAG+A + + +V + DG + + G D +G +AA + Sbjct: 242 QVPIAGYATLTENDAIELTALVGSMDGSVLLKEKVVGT--DPEKVGLEAADRL 292 >gi|148244854|ref|YP_001219548.1| porphobilinogen deaminase [Candidatus Vesicomyosocius okutanii HA] gi|226740640|sp|A5CW34|HEM3_VESOH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|146326681|dbj|BAF61824.1| porphobilinogen deaminase [Candidatus Vesicomyosocius okutanii HA] Length = 304 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 104/302 (34%), Positives = 168/302 (55%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A +S L ++ P ++++ ++TKGD+I N +L++IGGKGL Sbjct: 3 KTLKIATRQSPLALWQAQHVKSRLEKIY--PNLTVILVKITTKGDQILNSSLSKIGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++ G D AVHS KD+P ++ + ++ A L E+ D F+S+ S+ DL Sbjct: 61 FIKELEISIMKGMSDIAVHSMKDVPYEIPQEFELGAILKCENPFDAFVSNHFSSIDDLPK 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++ +GT S+RR L R D+ +ID RG + TRL KL++ + AI+LA AG+ RL Sbjct: 121 NAKVGTCSMRRILQLKVIRPDLQIIDLRGNVNTRLKKLDDGEFDAIILACAGLIRLGFGN 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 IK+ + P+ GQGAI IE N+ + +L+K + +T + ERA +L+G Sbjct: 181 RIKQQIPENQNLPAVGQGAIGIEIRENDKEILDLIKPLIDIETSYRIIAERAMNTQLEGG 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C +AGFA + G+V D + + G+ A +G + A + + K+ Sbjct: 241 CSVPVAGFATINNKQITLTGLVGNIDTGVILKEKIFGHVSQAEILGIELANKLILLGAKD 300 Query: 304 VF 305 + Sbjct: 301 IL 302 >gi|319400986|gb|EFV89205.1| porphobilinogen deaminase [Staphylococcus epidermidis FRI909] Length = 308 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 102/294 (34%), Positives = 173/294 (58%), Gaps = 10/294 (3%) Query: 8 IGTRCSPLALAHA--FETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + F + +D P +I I + TKGD+I ++ L+++GGKGLF Sbjct: 6 VGSRRSKLALTQSQQFIDKLKFID----PSLDIEIKEIVTKGDKIVDKQLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EI+ +L + EID A+HS KD+P+ + GL + RE D +I+ L++L+ S Sbjct: 62 KEIQNELFNKEIDMAIHSLKDVPSIIPDGLTLGCIPDREIPFDAYIAKNHIPLEELSEGS 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 ++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ + + Sbjct: 122 IVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDNI 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + L+ + P+ GQGA+ IE ++ + +L+ +++ D V ER FL+E+DGSC Sbjct: 182 VTTYLDRDVLLPAIGQGALGIECRSDDKELLDLLTKVHNHDVAQCVTAERTFLSEMDGSC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + I G+A + + + F G++++ DGK +E + G+ D + +G + +Q ++ Sbjct: 242 QVPIGGYATIVQDNQIEFTGLIMSPDGKERYEHTTLGS--DPVQLGIEVSQVLK 293 >gi|319785862|ref|YP_004145337.1| porphobilinogen deaminase [Pseudoxanthomonas suwonensis 11-1] gi|317464374|gb|ADV26106.1| porphobilinogen deaminase [Pseudoxanthomonas suwonensis 11-1] Length = 301 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 105/267 (39%), Positives = 149/267 (55%), Gaps = 3/267 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL + + L H P +V++PLST+GD + +R+L IGGKGLF Sbjct: 4 LRIATRKSPLALWQSEHVAARLRAAH--PGLEVVLVPLSTRGDEVLDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E + GE DCAVHS KD+P +L G + A L R D D F+S+ L L + Sbjct: 62 KELEIAMERGEADCAVHSLKDVPMELEPGFVLPAVLERADPADAFVSNDFADLDALPQGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+A L R D+ + D RG + TRL KL+ + HAI+LA AG++RL + I Sbjct: 122 VVGTSSLRRQAQLRARRPDLQLRDLRGNVNTRLAKLDAGEYHAIILACAGLQRLGLDARI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L + P+P Q + E + + L+ ++ H T + ERA L GSC Sbjct: 182 RARLVPPQWLPAPAQAVVACECRAGDERTIGLLSLLEHAPTRAVIEAERALNRGLHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIV-LASDGK 271 +A +A TL +V A+DG+ Sbjct: 242 VPVAAYAELHDRTLRLQALVGSAADGR 268 >gi|261856741|ref|YP_003264024.1| porphobilinogen deaminase [Halothiobacillus neapolitanus c2] gi|261837210|gb|ACX96977.1| porphobilinogen deaminase [Halothiobacillus neapolitanus c2] Length = 319 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 101/286 (35%), Positives = 156/286 (54%), Gaps = 5/286 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLA+ L +H P + ++ ++TKGD++ + L +IGGKGLF Sbjct: 11 IRIATRESPLAMWQTEFVADELRRLH--PGLRVELVSMTTKGDQLLDSPLAKIGGKGLFV 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P + GL++ A L D RD F+S+ +SL L + Sbjct: 69 KELELALMDGRADIAVHSMKDVPMRFPDGLELIAILEGHDPRDAFVSNEYESLAALPAGA 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ + + + RG I++R+ KL+ AI+LA AG+KR+ + I Sbjct: 129 VVGTSSLRRETQIRSRYPQLEIKMLRGNIQSRMAKLDRGDYDAIILAAAGLKRMGYDARI 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L+ E+ PS GQGA+ IE ++ L+ + H T V ERAF L+G C+ Sbjct: 189 RAELSPEESLPSVGQGALGIEARSDDAAIHALIAPLIHAATTTRVLAERAFNTRLNGGCQ 248 Query: 246 SAIAGFAYCK-GSTLYFYGIVLASDGKIF--HEVSRNGNRCDAINI 288 I G+A + L+ G+V DG + E++ +A+ + Sbjct: 249 VPIGGYAMLQDDGNLWLRGMVGRPDGTLTLRDEITGAATEGEALGV 294 >gi|242242934|ref|ZP_04797379.1| hydroxymethylbilane synthase [Staphylococcus epidermidis W23144] gi|242233535|gb|EES35847.1| hydroxymethylbilane synthase [Staphylococcus epidermidis W23144] Length = 308 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 102/294 (34%), Positives = 173/294 (58%), Gaps = 10/294 (3%) Query: 8 IGTRCSPLALAHA--FETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + F + +D P +I I + TKGD+I ++ L+++GGKGLF Sbjct: 6 VGSRRSKLALTQSQQFIDKLKFID----PSLDIEIKEIVTKGDKIVDKQLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EI+ +L + EID A+HS KD+P+ + GL + RE D +I+ L++L+ S Sbjct: 62 KEIQNELFNKEIDMAIHSLKDVPSIIPDGLTLGCIPDREIPFDAYIAKNHIPLEELSEGS 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 ++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ + + Sbjct: 122 IVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDNI 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + L+ + P+ GQGA+ IE ++ + +L+ +++ D V ER FL+E+DGSC Sbjct: 182 VTTYLDRDVLLPAIGQGALGIECRSDDKELLDLLAKVHNHDVAQCVTAERTFLSEMDGSC 241 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + I G+A + + + F G++++ DGK +E + G+ D + +G + +Q ++ Sbjct: 242 QVPIGGYATIVQDNQIEFTGLIMSPDGKERYEHTTLGS--DPVQLGIEVSQVLK 293 >gi|296162267|ref|ZP_06845062.1| porphobilinogen deaminase [Burkholderia sp. Ch1-1] gi|295887534|gb|EFG67357.1| porphobilinogen deaminase [Burkholderia sp. Ch1-1] Length = 332 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 106/265 (40%), Positives = 155/265 (58%), Gaps = 4/265 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 I +R S LA+ A R +L HK+ P ++ I+ ++T+GD+I +RTL+++GGKGLF + Sbjct: 15 IASRESRLAMWQAEHVRCAL---HKLYPSCDVKILGMTTRGDQILDRTLSKVGGKGLFVK 71 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 E+E L G D AVHS KD+P L +G +S + RED RD +S+T SL L +V Sbjct: 72 ELEAALADGRADLAVHSLKDVPMALPEGFALSTIMEREDPRDALVSNTYDSLAALPEGAV 131 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL + I+ Sbjct: 132 VGTSSLRREAMLRMRYPHLEVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLGERIR 191 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 +L+ ED P+ GQGA+ IE + + ++HE T +V ER L GSC+ Sbjct: 192 ALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHEHTAAAVEAERMVSRALGGSCEV 251 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGK 271 +A +A L+ GIV DG+ Sbjct: 252 PLAAYATWHDGALHLRGIVATPDGQ 276 >gi|254424552|ref|ZP_05038270.1| porphobilinogen deaminase [Synechococcus sp. PCC 7335] gi|196192041|gb|EDX87005.1| porphobilinogen deaminase [Synechococcus sp. PCC 7335] Length = 319 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 107/306 (34%), Positives = 159/306 (51%), Gaps = 5/306 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL ++ L P + + T+GD+I + L++IG KGL Sbjct: 8 RTIRIGSRKSQLALVQTHWVQAELSKA--FPDITFEVSTMETQGDKILDVALSKIGDKGL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120 FT+E+E ++S +D AVHS KD+PT+L +GL + RED D + H + L Sbjct: 66 FTQELEDDMLSHRVDFAVHSLKDLPTQLPEGLMLGCVTEREDPADALVVHEKHKDKQLDT 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSSLRR A L D RG + TRL KL+ + AI+LA AG+ RL Sbjct: 126 LPEGAVIGTSSLRRLAQLRHHFPHFQFKDIRGNVNTRLRKLDEGEYDAIVLAAAGLNRLD 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I ++L E + GQGA+ IE + ++K + H T ERAFL EL Sbjct: 186 MSDRIHQLLPAEISLHAVGQGALGIECRSGDEDILTVIKALEHLPTAQRCYAERAFLREL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +G TL GIV + DG+ + + G DA ++G++ A+ +R Sbjct: 246 EGGCQVPIGVNTRIEGDTLTLVGIVASLDGQQLIKDTVQGAPADAESMGKELAERLREQG 305 Query: 301 NKNVFN 306 + + + Sbjct: 306 AQKILD 311 >gi|187933878|ref|YP_001887094.1| porphobilinogen deaminase [Clostridium botulinum B str. Eklund 17B] gi|254800243|sp|B2TPD7|HEM3_CLOBB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|187722031|gb|ACD23252.1| hydroxymethylbilane synthase [Clostridium botulinum B str. Eklund 17B] Length = 290 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 109/291 (37%), Positives = 161/291 (55%), Gaps = 10/291 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LA L I ++I+ T+GDR + +L +IGGKGLF ++ Sbjct: 6 IATRKSKLAQVQTEIIMGKLKSKFNIDSKKLLIV---TEGDRKLDVSLNKIGGKGLFVKD 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE L++ E AVHS KD+P ++ +I+A REDIRDVFIS+ S KD+ + + Sbjct: 63 IELALLNKEAHAAVHSMKDVPFEVSSEFEITAITGREDIRDVFISNGDISFKDIKKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSS+RR A L RSD+ ++ RG ++TRL K+ I+LA AG+KRL E +I + Sbjct: 123 GTSSIRRAAQLKLLRSDLEIVPIRGNVQTRLKKMEEQNLDGIVLAAAGLKRLGDENLITD 182 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + ++F P+ QGA+ IE + + +I+ E T +V ER+F+ EL G C S Sbjct: 183 YFDPKEFLPAVSQGALGIECLKDGDANKYFEALIDAEATL-TVEAERSFMKELQGDCHSL 241 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN--GNRCDAINIGRDAAQYI 296 I ++ +G LY GI GKI V ++ G + + I +G+ AQ I Sbjct: 242 IGAYSEIQGDDLYMIGIYDIG-GKI---VKKDILGCKTNNIELGKKLAQKI 288 >gi|126701044|ref|YP_001089941.1| porphobilinogen deaminase [Clostridium difficile 630] gi|122973521|sp|Q180R9|HEM3_CLOD6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|115252481|emb|CAJ70324.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Clostridium difficile] Length = 301 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 102/265 (38%), Positives = 149/265 (56%), Gaps = 3/265 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LAL + L K P + I + TKGD I N +L +IG KGLF +E Sbjct: 5 VGTRGSNLALIQTEWVINELK--KKYPEISFEIKIIKTKGDLIQNVSLDKIGDKGLFVKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLALHSV 126 IE++L+ G+ID AVHS KDMP+ L GL+ + RED RDV I ++L DL +V Sbjct: 63 IEQQLLDGKIDIAVHSMKDMPSYLANGLKFAHTPKREDPRDVLILREGYKNLDDLPHGAV 122 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGT S RRK LL+ R D++++ RG +ETR+ K+ + H I+LA +GI R + I Sbjct: 123 IGTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDKIS 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L ++ P+P QGA+ IE N+ + +V + E+T + ER FL ++GSC Sbjct: 183 SYLPVDVVIPAPAQGALAIEIRSNDSAIEGIVNSLKDENTEIQILAERGFLDGVNGSCHI 242 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGK 271 +A + ++ G+ S+GK Sbjct: 243 PMAAYCEIIQDKIHLTGLYGDSEGK 267 >gi|226228000|ref|YP_002762106.1| porphobilinogen deaminase [Gemmatimonas aurantiaca T-27] gi|226091191|dbj|BAH39636.1| porphobilinogen deaminase [Gemmatimonas aurantiaca T-27] Length = 309 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 104/251 (41%), Positives = 143/251 (56%), Gaps = 7/251 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M P RIGTR S LAL A + + L D +P ++ +T GDRI +R L+ IG Sbjct: 1 MMTVPVRIGTRSSELALRQARQVAAQL-DARGVPSE---LVEYTTLGDRILDRPLSAIGE 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117 KGLFT E+E L++G IDCAVHS KD+PT +G+ + A L RED RD + A S Sbjct: 57 KGLFTAELEADLLAGRIDCAVHSLKDLPTADPQGIIVVALLEREDPRDALVVRAGVDAHS 116 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L + +GTSSLRR+A L RSD+ V + RG + TRL KL+ + A LLA AG+ Sbjct: 117 LDTLPEGARVGTSSLRRRAQLQALRSDLEVCELRGNVGTRLRKLDEGQVDAALLAAAGLH 176 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I L+ ++ +PGQGAI ++ ++ + ++H T +V ERA L Sbjct: 177 RLGLADRIVAYLDAPEWLSAPGQGAIAVQGRADDEALLSTLSSLDHAPTRVAVTAERALL 236 Query: 238 AELDGSCKSAI 248 A L+G C+ I Sbjct: 237 AALEGGCQVPI 247 >gi|56416851|ref|YP_153925.1| porphobilinogen deaminase [Anaplasma marginale str. St. Maries] gi|56388083|gb|AAV86670.1| porphobilinogen deaminase [Anaplasma marginale str. St. Maries] Length = 303 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 99/283 (34%), Positives = 157/283 (55%), Gaps = 2/283 (0%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 R+GTR S LAL A E ++++ P + + + T GD +R L +IGGKGLF + Sbjct: 7 RLGTRGSTLALIQAEEVKAAI--AAHFPEVRVDVTKIKTSGDIKVDRPLCDIGGKGLFIK 64 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE+ L++ +ID AVHSAKD+P + L + L R DVFIS +SL L + Sbjct: 65 EIEEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNSLPAGAK 124 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGTSS+RRK LL +R D+ + RG ++TR+ K+ + + I+LA AG+ R+ I Sbjct: 125 IGTSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRISARAKIT 184 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E+L+ + + GQGAIC++ ++ ++ +N +++ +V ER+F+ ++GSC + Sbjct: 185 EVLHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAVNGSCHT 244 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +A A S L +LA D + R DA ++G Sbjct: 245 PLAAMARYVDSGLMSMKCMLAHDSRTMVSAERTFPERDAESVG 287 >gi|261364223|ref|ZP_05977106.1| hydroxymethylbilane synthase [Neisseria mucosa ATCC 25996] gi|288567837|gb|EFC89397.1| hydroxymethylbilane synthase [Neisseria mucosa ATCC 25996] Length = 311 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 102/296 (34%), Positives = 167/296 (56%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL++IGG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKTLY--PDCEVEILGMTTRGDQILDKTLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFIKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPKGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + +++K +NH+ T V ERA L Sbjct: 179 LDERIRLILSEADSLPAAGQGALGIEIAAHRTDLLDVLKPLNHDVTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEEDGLLTLRGLVGHPDGSVILQAHAQAPAAYAEALGRAVAKKL 294 >gi|255102624|ref|ZP_05331601.1| porphobilinogen deaminase [Clostridium difficile QCD-63q42] gi|255308450|ref|ZP_05352621.1| porphobilinogen deaminase [Clostridium difficile ATCC 43255] Length = 301 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 102/265 (38%), Positives = 149/265 (56%), Gaps = 3/265 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LAL + L K P + I + TKGD I N +L +IG KGLF +E Sbjct: 5 VGTRGSNLALIQTEWVINELK--KKYPEISFEIKIIKTKGDLIQNVSLDKIGDKGLFVKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLALHSV 126 IE++L+ G+ID AVHS KDMP+ L GL+ + RED RDV I ++L DL +V Sbjct: 63 IEQQLLDGKIDIAVHSMKDMPSYLADGLKFAHTPKREDPRDVLILREGYKNLDDLPHGAV 122 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGT S RRK LL+ R D++++ RG +ETR+ K+ + H I+LA +GI R + I Sbjct: 123 IGTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDKIS 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L ++ P+P QGA+ IE N+ + +V + E+T + ER FL ++GSC Sbjct: 183 SYLPVDVVIPAPAQGALAIEIRSNDSTIEGIVNSLKDENTEIQILAERGFLDGVNGSCHI 242 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGK 271 +A + ++ G+ S+GK Sbjct: 243 PMAAYCEIIQDKIHLTGLYGDSEGK 267 >gi|241762462|ref|ZP_04760539.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241372964|gb|EER62631.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 308 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 108/286 (37%), Positives = 154/286 (53%), Gaps = 5/286 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 PFR+G+R SPLAL A S+L H +VI+P+ T GD+ ++ L +IGGK L+ Sbjct: 4 PFRLGSRGSPLALIQARSVASALCAAHSWSEDAVVIVPIRTSGDKNRHQALADIGGKALW 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E++ L +G+ID AVHS KD+ T + I+A LPRED+ D I SL+ L Sbjct: 64 TKELDIALTTGQIDAAVHSMKDVETFRPSHISIAAMLPREDVHDRLIG--IPSLEVLPYS 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +GT+S RR A + R DI + RG I+TRL KL N + A LLA AG+ RL + V Sbjct: 122 GCVGTASPRRAAQIRCIRPDIEIKLLRGNIDTRLEKLANKQFDATLLAAAGLIRLGRNDV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++ P+ GQGAI IE ++ A E V +I+H T +V ER L L+ C Sbjct: 182 GYDV-PLDQMLPAAGQGAIGIEALADS-AAWEKVSIIDHYPTHLAVQSERQLLLRLNADC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-GNRCDAINIG 289 S IA FA + + +GK + + DA +G Sbjct: 240 HSPIAVFAEILEKNIRLRACLYTENGKFSASIDKEISQPSDAFEVG 285 >gi|215272308|ref|NP_001135813.1| hydroxymethylbilane synthase [Nasonia vitripennis] Length = 356 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 108/277 (38%), Positives = 154/277 (55%), Gaps = 7/277 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+ FR+G+R S LAL L D++ P I+ +STKGD+I N +L +IG K Sbjct: 5 EQNVFRVGSRKSELALIQTEYVIKCLKDLN--PDKEFKIVTMSTKGDKILNISLPKIGEK 62 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118 LFTEE+E L + +D VHS KD+PT L +GL + A L RED RD + + +A +L Sbjct: 63 SLFTEELENALENNRVDFLVHSLKDLPTTLREGLALGAILEREDPRDAVVMSKAFSAFTL 122 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGI 176 L SVIGTSSLRR A L R + V + RG + TR KL++ K AI+LA AG+ Sbjct: 123 DTLPPGSVIGTSSLRRSAYLARNMPHLKVENIRGNLNTRFKKLDDEKGAYAAIILAVAGL 182 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 KR+ E I + L+ E+ GQGA+ +E +P+ L++ +NH T ER+F Sbjct: 183 KRMGLENRISQYLDSEETLYCVGQGALAVECREVDPRVLSLLEPLNHFHTTLRCVAERSF 242 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 L L G C + + + + L G VL+ +GK+ Sbjct: 243 LKYLGGGCSAPVGVSSTLENKELKITGAVLSLNGKVL 279 >gi|254671436|emb|CBA08950.1| Porphobilinogen deaminase [Neisseria meningitidis alpha153] Length = 311 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 102/296 (34%), Positives = 165/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPKGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 179 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKL 294 >gi|153004241|ref|YP_001378566.1| porphobilinogen deaminase [Anaeromyxobacter sp. Fw109-5] gi|152027814|gb|ABS25582.1| porphobilinogen deaminase [Anaeromyxobacter sp. Fw109-5] Length = 313 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 104/284 (36%), Positives = 146/284 (51%), Gaps = 3/284 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLA A L K P + + L TKGDRI L E+GGKGLF Sbjct: 2 IRIATRRSPLAKWQANHVADLLR--AKEPGLEVRLHELVTKGDRILEVPLAEVGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ + + AVHS KD+P +L GL I A RED RD S ++L L + Sbjct: 60 KEIEDALLASDAEIAVHSMKDLPAELAPGLAIGAVPEREDPRDALCSPRYKTLAGLPRGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR A L R D+ + RG +ETRL K + A++LAYAG++RL + Sbjct: 120 KVGTSSLRRGAQLKALRPDLQLEMVRGNVETRLRK-ASEALDAVVLAYAGLRRLGLAEHA 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + E+ P+ QGA+ +E + + + H +T + ER FL ++G C+ Sbjct: 179 TYVFPAEEMLPAVAQGALALEARAADAPTMARLAALEHPETRVRIEAERGFLGRIEGGCQ 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 IAG A +G + +V + DG R+G DA +G Sbjct: 239 VPIAGHATVQGGRVSMRALVASLDGTRVIRGERSGPAADARQLG 282 >gi|269837831|ref|YP_003320059.1| porphobilinogen deaminase [Sphaerobacter thermophilus DSM 20745] gi|269787094|gb|ACZ39237.1| porphobilinogen deaminase [Sphaerobacter thermophilus DSM 20745] Length = 311 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 100/256 (39%), Positives = 147/256 (57%), Gaps = 2/256 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L + P ++ +ST GDR LT IGG+G+F Sbjct: 11 VRLGTRGSALAREQTRRVMAALAALR--PDLELIETIVSTAGDRDKRTPLTVIGGQGVFA 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E++ L++G +D AVHSAKD+PT+ + GL I A+ RED RDV +S +SL DL + Sbjct: 69 RELQTALLAGTVDVAVHSAKDLPTEPVPGLVIGAFFSREDARDVLVSRDGRSLADLPPGA 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS RR L R R D+ +D RG ++TRL K+ + A +LA AG+ R+ ++ I Sbjct: 129 RVGTSSRRRLVALRRLRPDLEAVDLRGNLDTRLRKVREGEVDAAILAAAGLLRMGWQEHI 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+++DF P+PGQGA+ IE ++P E++ +N + ER+FL L G C+ Sbjct: 189 TEFLSLDDFVPAPGQGALAIECRADDPAVNEMLAALNDPAAALAARTERSFLRALGGGCR 248 Query: 246 SAIAGFAYCKGSTLYF 261 S I A G T+ Sbjct: 249 SPIGAHATVSGDTVTL 264 >gi|121608027|ref|YP_995834.1| porphobilinogen deaminase [Verminephrobacter eiseniae EF01-2] gi|121552667|gb|ABM56816.1| porphobilinogen deaminase [Verminephrobacter eiseniae EF01-2] Length = 345 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 97/257 (37%), Positives = 145/257 (56%), Gaps = 4/257 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P I TR S LAL A ++ L + H++ ++ ++T+GD+I +R+L+++GGKGLF Sbjct: 8 PIVIATRASRLALWQAGHVQALL----QARGHSVQLLGMTTRGDQILDRSLSKVGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KDMP +L G ++ L RED RD ++S +L+ L Sbjct: 64 VKELEAALAEGRADIAVHSLKDMPMELPAGFALACVLEREDPRDAWVSPQYATLEALPPG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+ALL R D+ + RG ++TRL KL+ + AI+LA AG+KRL E Sbjct: 124 AVVGTSSLRRQALLQALRPDLRMEPLRGNLDTRLRKLDAGQYQAIVLAVAGLKRLGLEAR 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ P+ GQGA+ IE + + H+ +W +V ERA + GSC Sbjct: 184 IRAPFAPAALLPAAGQGALGIEVRSERQDLCAALAALAHQPSWLAVAAERAVSRAMGGSC 243 Query: 245 KSAIAGFAYCKGSTLYF 261 +A + G+ L Sbjct: 244 SMPLAAYGQFHGAVLQL 260 >gi|126658960|ref|ZP_01730102.1| porphobilinogen deaminase [Cyanothece sp. CCY0110] gi|126619758|gb|EAZ90485.1| porphobilinogen deaminase [Cyanothece sp. CCY0110] Length = 317 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 104/297 (35%), Positives = 160/297 (53%), Gaps = 5/297 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + + L + P + +ST+GD+I + L +IG KGL Sbjct: 6 RAIRIGSRKSQLALVQTYWIQEQLQKHY--PDRQFDVETMSTQGDKILDVALAKIGDKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120 FT+E+E ++ ++D AVHS KD+PT L GL + R + D + H + L Sbjct: 64 FTKELETAMLQNQVDFAVHSLKDLPTNLPDGLMLGCVTERVNPADALVVNEKHKDKQLDT 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SVIGTSSLRR A L ++ D RG + TRL+KL+ + AI+LA AG++RL Sbjct: 124 LPEGSVIGTSSLRRLAQLRHHYPHLTFKDVRGNVNTRLSKLDAGEYDAIILAVAGLQRLD 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ + + GQGA+ IE +P+ +L+K + H +T D ERAFL EL Sbjct: 184 MSDRIHQVIPDDISLHAVGQGALGIECRTGDPEILDLLKALEHPETRDRCYAERAFLREL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +G C+ I + + L G+V + DGK + + G + A +G++ A +R Sbjct: 244 EGGCQVPIGVNTKIENNFLTLTGMVASLDGKTLIKDTIEGEQDQAEKLGQELAMRLR 300 >gi|255066348|ref|ZP_05318203.1| hydroxymethylbilane synthase [Neisseria sicca ATCC 29256] gi|255049558|gb|EET45022.1| hydroxymethylbilane synthase [Neisseria sicca ATCC 29256] Length = 312 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 102/296 (34%), Positives = 166/296 (56%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL++IGG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKTLY--PDCEVEILGMTTRGDQILDKTLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L + ++A R + D F+S+ L++ Sbjct: 59 KGLFIKELEQALQDGRADLAVHSIKDVPMDLPEDFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + +++K +NH+ T V ERA L Sbjct: 179 LDERIRLILSEADSLPAAGQGALGIEIAAHRTDLLDVLKPLNHDVTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPATYADALGRAVAKKL 294 >gi|161869466|ref|YP_001598634.1| porphobilinogen deaminase [Neisseria meningitidis 053442] gi|161595019|gb|ABX72679.1| porphobilinogen deaminase [Neisseria meningitidis 053442] Length = 316 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 103/296 (34%), Positives = 163/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 6 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++ R + D F+S+ L++ Sbjct: 64 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALATIGERANPFDAFVSNQYTRLEE 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK Sbjct: 124 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 184 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 244 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKL 299 >gi|254995040|ref|ZP_05277230.1| porphobilinogen deaminase [Anaplasma marginale str. Mississippi] Length = 303 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 99/283 (34%), Positives = 157/283 (55%), Gaps = 2/283 (0%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 R+GTR S LAL A E ++++ P + + + T GD +R L +IGGKGLF + Sbjct: 7 RLGTRGSTLALIQAEEVKAAI--AAHFPEVRVDVTKIKTSGDVKVDRPLCDIGGKGLFIK 64 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE+ L++ +ID AVHSAKD+P + L + L R DVFIS +SL L + Sbjct: 65 EIEEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNSLPAGAK 124 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGTSS+RRK LL +R D+ + RG ++TR+ K+ + + I+LA AG+ R+ I Sbjct: 125 IGTSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRISARAKIT 184 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E+L+ + + GQGAIC++ ++ ++ +N +++ +V ER+F+ ++GSC + Sbjct: 185 EVLHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAVNGSCHT 244 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +A A S L +LA D + R DA ++G Sbjct: 245 PLAAMARYVDSGLMSMKCMLAHDSRTMVFAERTFPERDAESVG 287 >gi|167561971|ref|ZP_02354887.1| porphobilinogen deaminase [Burkholderia oklahomensis EO147] Length = 278 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 103/264 (39%), Positives = 156/264 (59%), Gaps = 2/264 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P +L +G ++A + RED RD F+S+ SL +L SV+ Sbjct: 74 LENALADGRADLAVHSLKDVPMELPEGFALAAVMSREDPRDAFVSNAYASLAELPAGSVV 133 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+ Sbjct: 134 GTSSLRREAMLRARYPQLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L+++D P+ GQGA+ IE + ++ T +V ERA L GSC+ Sbjct: 194 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDCATALAVEAERAVSRALGGSCEVP 253 Query: 248 IAGFAYCKGSTLYFYGIVLASDGK 271 +A A +G L+ G V +DG+ Sbjct: 254 LAAHAVWRGDELHLTGSVSTTDGR 277 >gi|312129517|ref|YP_003996857.1| hydroxymethylbilane synthase [Leadbetterella byssophila DSM 17132] gi|311906063|gb|ADQ16504.1| hydroxymethylbilane synthase [Leadbetterella byssophila DSM 17132] Length = 300 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 103/292 (35%), Positives = 164/292 (56%), Gaps = 11/292 (3%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 RIGTR S LA+ A +S L + I+ + TKGD++ + L++IG KG+FTE Sbjct: 4 RIGTRVSLLAMWQANYIKSRL----EAAGAETEIVGMETKGDKVLDVALSKIGSKGVFTE 59 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 E+E+KL++GEI AVHSAKDM + L + ++ A+ RE DV ++ A DL+ Sbjct: 60 ELEEKLLNGEIHIAVHSAKDMQSSLAEDFELIAFTEREYPGDVLVADRAL---DLSAPIT 116 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGTSS+RR A + I +++ RG ++TR+ K+ + + + LAYAG+ R++ +++I Sbjct: 117 IGTSSVRRIAFFKKHYPHIKLVNMRGNLQTRIQKMRSGQCDGLALAYAGVHRMEYDELIV 176 Query: 187 EILNIEDFPPSPGQGAICIETHVN-NPKAQELVK-VINHEDTWDSVNCERAFLAELDGSC 244 ++ F P GQG + +E N + + VK N E+T+ + ERAFL E++G C Sbjct: 177 HRFPLDQFIPPVGQGTVTVEIAKNLDENIKTFVKNTCNDENTYKCLQAERAFLKEMNGGC 236 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + G A +G + F G + +G EVS D I +G+ AA+ + Sbjct: 237 SIPVFGHATLEGEEILFKGGITNLEGT--EEVSMEFRGTDPILLGQHAAEQV 286 >gi|319943887|ref|ZP_08018168.1| hydroxymethylbilane synthase [Lautropia mirabilis ATCC 51599] gi|319743120|gb|EFV95526.1| hydroxymethylbilane synthase [Lautropia mirabilis ATCC 51599] Length = 315 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 103/280 (36%), Positives = 149/280 (53%), Gaps = 2/280 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RI TR S LAL A L H P + ++ ++T+GD+I +R L EIGGKGLF Sbjct: 9 PLRIATRESRLALWQANHVAELLRARH--PAAGVALLGMTTRGDQILDRPLAEIGGKGLF 66 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E L G + AVHS KD+P L +G ++A + R D RD F+S SL +L Sbjct: 67 TKELEVALFDGRAELAVHSLKDVPMDLPEGFDLAAVMTRADARDAFVSTRYASLDELPPD 126 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR A L + RG ++TRL KL+ + AI+LA AG+ RL Sbjct: 127 AVVGTSSLRRAAQLQARHPGFRIQPLRGNLDTRLGKLDAGQYDAIVLAAAGLTRLGLADR 186 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I++ L +++ P+PGQG + IE + ++ + +N + ERA +L G+C Sbjct: 187 IRQYLPLDEMLPAPGQGMLGIEIRADRDDVRQALAFLNDPEAARIAAAERAVSRQLGGNC 246 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284 K+ +A A S +LA D V+R G D Sbjct: 247 KTPLAAHARFTASGQMQLDALLADDDGRIARVTRVGKVAD 286 >gi|187923070|ref|YP_001894712.1| porphobilinogen deaminase [Burkholderia phytofirmans PsJN] gi|238058734|sp|B2T1D1|HEM3_BURPP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|187714264|gb|ACD15488.1| porphobilinogen deaminase [Burkholderia phytofirmans PsJN] Length = 342 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 104/265 (39%), Positives = 156/265 (58%), Gaps = 4/265 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 I +R S LA+ A R +L HK+ P ++ I+ ++T+GD+I +RTL+++GGKGLF + Sbjct: 15 IASRESRLAMWQAEHVRCAL---HKLYPSCDVKILGMTTRGDQILDRTLSKVGGKGLFVK 71 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 E+E L G D AVHS KD+P +L G +S + RED RD +S+ SL L +V Sbjct: 72 ELEAALADGRADLAVHSLKDVPMELPAGFALSTIMEREDPRDALVSNDYDSLAALPAGAV 131 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSSLRR+A+L + V RG ++TRL+KL+ AI+LA AG+KRL + I+ Sbjct: 132 VGTSSLRREAMLRMRYPHLEVRPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLGERIR 191 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 +L+ ED P+ GQGA+ IE + + ++H+ T +V ER L GSC+ Sbjct: 192 ALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHDHTAAAVEAERMVSRALGGSCEV 251 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGK 271 +A +A + L+ GIV DG+ Sbjct: 252 PLAAYATWRDGALHLRGIVATPDGQ 276 >gi|148654060|ref|YP_001281153.1| porphobilinogen deaminase [Psychrobacter sp. PRwf-1] gi|148573144|gb|ABQ95203.1| porphobilinogen deaminase [Psychrobacter sp. PRwf-1] Length = 339 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 105/296 (35%), Positives = 162/296 (54%), Gaps = 17/296 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR SPLA+ A ++ L ++ P + ++ + T+GD+I + L +IGGKGL Sbjct: 11 KTLNIATRKSPLAMWQAEHIKARLESLY--PDLEVNLVTMVTQGDKILDTPLAKIGGKGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ L G D AVHS KD+P L +GL + Y RE D F+S+T SL L Sbjct: 69 FVKELEQALYDGRADIAVHSLKDVPMVLPEGLILGTYCKRETPTDAFVSNTYDSLDALPQ 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GT+SLRR+ + R D+ + RG ++TRL+KL+ + AI+LA +G+KR++ Sbjct: 129 GAVVGTASLRRQCQIKAHRPDLIIKSLRGNVQTRLSKLDAGEYDAIILATSGLKRVELSD 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 IK+ ++I+ P+ GQGA+ IE ++ L+K +N + ERA L+G Sbjct: 189 RIKQEIDIDISLPAVGQGALAIECRSDDDAVLSLLKPLNDGQARIRLMAERALNRRLEGG 248 Query: 244 CKSAIAGFAYC-KGS----------TLYFYGIVLASDGKIFHEVSRN----GNRCD 284 C+ IA FA KG+ TL+ G V + DG + + GN+ D Sbjct: 249 CQVPIAAFAVIEKGAENDDTGSHNKTLWLRGRVGSEDGTTLLKADKRIALMGNQAD 304 >gi|220910316|ref|YP_002485627.1| porphobilinogen deaminase [Cyanothece sp. PCC 7425] gi|219866927|gb|ACL47266.1| porphobilinogen deaminase [Cyanothece sp. PCC 7425] Length = 322 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 107/297 (36%), Positives = 160/297 (53%), Gaps = 5/297 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + + L P + + +ST+GD+I + L +IG KGL Sbjct: 10 RTIRIGSRKSQLALVQTYWVQEQLQ--KHFPDRSFEVHTMSTQGDKILDVALAKIGDKGL 67 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120 FT+E+E+ ++S E D AVHS KD+PT L GL + RE+ D + + + L+ Sbjct: 68 FTKELEQGMLSQETDFAVHSLKDLPTHLPDGLILGCITERENPADALVMNEKYRDRPLET 127 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSSLRR A L + ++ D RG + TRL KL+ + A++LA AG++RL Sbjct: 128 LPEGAVIGTSSLRRLAQLRHYFPHLTFKDVRGNVNTRLAKLDAGEYDALVLAVAGLQRLG 187 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +IL E + GQGA+ IE ++P+ L+K + H+ T ERAFL EL Sbjct: 188 FSDRIHQILPPEISLHAVGQGALGIECRSDDPEVLSLIKALEHQPTAWRCLAERAFLREL 247 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +G C+ I +G L G+V + DG+ + G A +G + AQ +R Sbjct: 248 EGGCQVPIGVNTQLEGDQLTLTGLVASLDGQRLIKDQITGAATTAEQMGTELAQRLR 304 >gi|312793378|ref|YP_004026301.1| porphobilinogen deaminase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180518|gb|ADQ40688.1| porphobilinogen deaminase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 290 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 99/249 (39%), Positives = 139/249 (55%), Gaps = 3/249 (1%) Query: 41 IPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAY 100 +P+ TKGD ++L E G+F +EIE L+S EID AVHS KD+P ++ +I A Sbjct: 36 VPIKTKGDIDKTKSLKEFKSPGVFVKEIELALLSREIDLAVHSLKDLPCEMDSNFEIVAV 95 Query: 101 LPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK 160 + RED RDV +S L ++ IGTSSLRR+ L R DI VI+ RG IETRL+K Sbjct: 96 VEREDPRDVLVSKDGLGFYQLKSNAKIGTSSLRREVHLKNLREDIQVINIRGNIETRLSK 155 Query: 161 LNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220 + + I+LAYA +KRLK + + I +I + P PGQGAICIE ++P L K Sbjct: 156 IQSEGLDGIVLAYAALKRLKLDSYVSYIFDINEITPCPGQGAICIECLKDSPYKSILSK- 214 Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 IN D + ER L L G C S+I F + +Y + +L D + + S G Sbjct: 215 INDADAYIQTQFERLVLKFLGGGCHSSIGVFCKTDQNKIYAFASLLRGDKLV--KASIEG 272 Query: 281 NRCDAINIG 289 N+ D +++ Sbjct: 273 NKDDFLSLA 281 >gi|254283408|ref|ZP_04958376.1| porphobilinogen deaminase [gamma proteobacterium NOR51-B] gi|219679611|gb|EED35960.1| porphobilinogen deaminase [gamma proteobacterium NOR51-B] Length = 303 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 102/267 (38%), Positives = 149/267 (55%), Gaps = 5/267 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR SPLAL A L ++H P + ++ ++++GD++ +R L ++GGKGLF +E Sbjct: 6 IATRESPLALWQANHVADRLSELH--PELEVELLGMTSRGDQLLDRPLYKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L GL + RED D + L + + Sbjct: 64 LETALQDGSADIAVHSMKDVPMALPPGLTLGVICEREDPTDSLVG--VSGFDQLPQGARV 121 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR + LLR R D+ + RG + TRL KL+ + +AI+LA AG+KRL E I + Sbjct: 122 GTSSLRRGSQLLRHRPDLEIGFLRGNVNTRLAKLDAGEFNAIILASAGLKRLGFEDRIGQ 181 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +++ + P+ GQGA+ IE + + EL+K ++H T V ERA + LDG C Sbjct: 182 LIDPDLSLPAGGQGAVGIEYRDGDDRIAELLKPLHHVQTAACVLAERALVRRLDGGCDVP 241 Query: 248 IAGFAYCKG-STLYFYGIVLASDGKIF 273 IA FA G L+ G V +++GK Sbjct: 242 IASFALPDGDGGLWLRGRVGSTEGKTL 268 >gi|330684284|gb|EGG96022.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU121] Length = 298 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 99/270 (36%), Positives = 157/270 (58%), Gaps = 4/270 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + L V P +I I + TKGDRI ++ L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQSQQFIDKLKQVR--PELDIEIKEIVTKGDRIVDKQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+ +L +ID A+HS KD+P+ + +GL + RE D +IS L++L S+I Sbjct: 64 IQNELFEKQIDMAIHSLKDVPSVIPEGLTLGCIPDREVPFDAYISKNHTPLRELPEGSII 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L + + RG I+TRL KL AI+LA AG++R+ + ++ Sbjct: 124 GTSSLRRGAQILSKYPHLEIKWIRGNIDTRLQKLETEDYDAIILAAAGLRRMGWSDDIVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ + P+ GQGA+ IE ++ + +L++ ++++D V ER FLAE+DGSC+ Sbjct: 184 TYLDKDVLLPAIGQGALGIECRSDDKELLDLLQEVHNKDVEKCVTAERTFLAEMDGSCQV 243 Query: 247 AIAGFAYCKG-STLYFYGIVLASDGKIFHE 275 I G+A + F G+++ DG +E Sbjct: 244 PIGGYATINSQQQIEFTGLIMTPDGTERYE 273 >gi|81299776|ref|YP_399984.1| porphobilinogen deaminase [Synechococcus elongatus PCC 7942] gi|161621822|ref|YP_171285.2| porphobilinogen deaminase [Synechococcus elongatus PCC 6301] gi|123755408|sp|Q31PM2|HEM3_SYNE7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|81168657|gb|ABB56997.1| hydroxymethylbilane synthase [Synechococcus elongatus PCC 7942] Length = 320 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 103/271 (38%), Positives = 148/271 (54%), Gaps = 5/271 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P RIG+R S LAL + L ++ P + +ST+GD I + L +IG KGL Sbjct: 7 RPIRIGSRKSQLALVQTHWVQGELQRLY--PDRQFDVQTMSTQGDIILDVALAKIGDKGL 64 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKD 120 FT+E+E +++GE+D AVHS KD+PT+L +GL + RED D + H L+ Sbjct: 65 FTKELEVAMLAGEVDFAVHSLKDLPTRLPEGLILGCVTEREDPADALVVHDRFKDHQLET 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSSLRR A L + D RG + TRL KL+ + A++LA AG++RL Sbjct: 125 LPEGTVIGTSSLRRLAQLRHHYPHLQFKDVRGNLNTRLAKLDAGEYDALILAAAGLQRLS 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ + GQGA+ IE +P+ EL+K + HE T ERAFL EL Sbjct: 185 MADRIHQLIPAAVSLHAVGQGALGIECRAEDPEILELLKALEHEPTSQRCLAERAFLREL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 +G C+ I TL G+V + DG+ Sbjct: 245 EGGCQVPIGVNTAIADGTLTLTGMVASLDGQ 275 >gi|221065751|ref|ZP_03541856.1| porphobilinogen deaminase [Comamonas testosteroni KF-1] gi|220710774|gb|EED66142.1| porphobilinogen deaminase [Comamonas testosteroni KF-1] Length = 314 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 94/254 (37%), Positives = 145/254 (57%), Gaps = 4/254 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LA+ A ++ L + H++ ++ ++TKGD+I +R L+++GGKGLF +E Sbjct: 13 IATRESQLAMWQAEHVQAIL----RGRGHSVDLLGMTTKGDQILDRALSKVGGKGLFVKE 68 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P +L +G ++ + RED RD F+S+ SL +L +V+ Sbjct: 69 LEVALEEGRADLAVHSLKDVPMELPEGFVLACVMTREDPRDAFVSNRYASLDELPQGAVV 128 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+ALL R D+ + RG + TRL KL+ + AI+LA AG+ RL+ I+ Sbjct: 129 GTSSLRRQALLQALRPDLKIEALRGNVNTRLRKLDEGQYDAIVLAAAGLMRLEMSDRIRA 188 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + P+ GQGA+ IE + + + + H TW +V ERA + GSC Sbjct: 189 RFDPAQMLPAAGQGALGIEVRADRQDIIDALAPLAHMPTWLTVTAERAVSRCMGGSCSMP 248 Query: 248 IAGFAYCKGSTLYF 261 +A + + L+ Sbjct: 249 LAAYGRFESDILHM 262 >gi|85711585|ref|ZP_01042643.1| Porphobilinogen deaminase [Idiomarina baltica OS145] gi|85694737|gb|EAQ32677.1| Porphobilinogen deaminase [Idiomarina baltica OS145] Length = 310 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 102/287 (35%), Positives = 156/287 (54%), Gaps = 4/287 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RI TR S LA+ A ++ L ++ P I ++P+ST+GD I + L +IGGKGL Sbjct: 3 KTVRIATRKSKLAMWQAEHIQARLASLY--PELTIELVPMSTRGDIILDTPLAKIGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++ G D AVHS KD+P + GL++ ED RD F+S+ QSL +L Sbjct: 61 FVKELEAAMLEGRADLAVHSMKDLPVEFPPGLELHTICESEDPRDAFVSNHYQSLNELPE 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GT SLRR+ + + + D RG ++TRL KL+ + AI+LA +G+ RL+ + Sbjct: 121 GAVVGTCSLRRRCQVKERFPHLIINDLRGNVQTRLRKLDEGQFDAIILAASGLIRLELGE 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + +ED P+ GQG + IE ++ + + L++ + T V ERA L G Sbjct: 181 RITSFIPVEDSLPANGQGVLGIEVRSDDDEIKALLEPLQCPTTRFRVLAERAMNRRLQGG 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG--KIFHEVSRNGNRCDAINI 288 C+ I FA G L G+V DG I E+ + +A+ I Sbjct: 241 CQVPIGAFAVVDGDHLSLRGLVGDPDGVEVIREEIQGPVEQAEALGI 287 >gi|306819824|ref|ZP_07453478.1| hydroxymethylbilane synthase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304552071|gb|EFM40008.1| hydroxymethylbilane synthase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 301 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 107/301 (35%), Positives = 164/301 (54%), Gaps = 19/301 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDV--HKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M+ + RI R S LAL ++D+ K N I+ + T GD+ L+EI Sbjct: 1 MKMQTVRIAGRKSKLALVQT----QRVIDLLKQKYKDVNFEIVTVETLGDKNLKEKLSEI 56 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQS 117 G KGLFT EIE+ L++G +D AVHS KDMPT ++ L+I AY+ RE +DV + + +S Sbjct: 57 GTKGLFTFEIEQMLLNGSVDMAVHSLKDMPTDFIRDLKIGAYIKRESNKDVIVFNKDYKS 116 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 +KDL ++ IGTSSLRR+ + + D V + RG I TRL ++ + AI+LA + Sbjct: 117 VKDLPKNAKIGTSSLRREVQIKKLGKDFEVANIRGNIHTRLKRMKDENFDAIILAKVALT 176 Query: 178 RLKKEKVIKEILNIEDFP--PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 RL +++ L E+ P + GQG IC++ +N K +++++ +N +T V ER Sbjct: 177 RLN----LQDELVFEELPFVSAAGQGCICVQVKKDNKKIEKMLEFLNDAETQSCVMAERE 232 Query: 236 FLAELDGSCKSAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 FL + G C + + AYC+ G Y V + DGK + +S D N+G+ A Sbjct: 233 FLHTIGGGCHTPVG--AYCEKIGQIYRIYAFVSSLDGKKY--LSCEIKSKDTENLGKQTA 288 Query: 294 Q 294 Q Sbjct: 289 Q 289 >gi|149174132|ref|ZP_01852760.1| porphobilinogen deaminase [Planctomyces maris DSM 8797] gi|148847112|gb|EDL61447.1| porphobilinogen deaminase [Planctomyces maris DSM 8797] Length = 318 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 106/300 (35%), Positives = 161/300 (53%), Gaps = 7/300 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 EK+P RI TR S LAL A+ L P I I+ ++++GDR L+E GG Sbjct: 6 EKRPLRIATRASNLALWQAYYVSDLLKKQSSERP--IEIVHITSEGDRDLTSPLSEFGGL 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI----SHTAQS 117 G+FT E++K ++ G D AVHS KD+PT+ GLQ++ R + DV I S + Sbjct: 64 GVFTREVQKAVLDGRADLAVHSLKDLPTEQAPGLQLAGIPERGPLYDVLIFPQGSEAVEH 123 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 + DLA + IGT SLRR+A LL RSD+ +++ RG +ETRL KL+ + A+ LA AG+ Sbjct: 124 ITDLADDARIGTGSLRRRAQLLHQRSDLQMLEVRGNVETRLKKLDAGEYDALCLAEAGMV 183 Query: 178 RLK-KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 RL+ E+ +L + P+ GQGA+ IE ++ + L+ ++ T + ER+ Sbjct: 184 RLELLEQRASLLLQPPEVYPAVGQGALGIECRADDEETAALLAGLSDPPTQAATTAERSL 243 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 LA L C + I + L +VL++DG S G+ +A +IG A+ + Sbjct: 244 LAHLRAGCHAPIGSLSQTTVDQLTLEAVVLSADGVERICASVTGSLTEAADIGVKVAKAL 303 >gi|311745811|ref|ZP_07719596.1| hydroxymethylbilane synthase [Algoriphagus sp. PR1] gi|126576013|gb|EAZ80291.1| hydroxymethylbilane synthase [Algoriphagus sp. PR1] Length = 312 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 106/310 (34%), Positives = 169/310 (54%), Gaps = 15/310 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +IGTR S LAL A+ L V IVII TKGD+I + ++ +IG KG+ Sbjct: 3 KLIKIGTRGSKLALWQAYYVEELL--VKAGLKAEIVII--DTKGDQILDVSIAKIGSKGV 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E +L+ G ID AVHSAKDM + L +G +I A+ RE DV SH KD+ L Sbjct: 59 FTQELEDQLLDGRIDIAVHSAKDMQSNLPEGFEIIAFTERETENDVLASHK----KDIDL 114 Query: 124 HS-----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +GTSS RR A L + + ++ RG ++TR+ K+ A+LLAYAG+ R Sbjct: 115 SGASKPLTLGTSSTRRVATLKHFYPHVKTVEVRGNLQTRIRKMEEGLCDALLLAYAGVHR 174 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVN-NPKA-QELVKVINHEDTWDSVNCERAF 236 + +++I + L++ +F P+ GQG++ IE +P+ ++++ NH +T + ERA+ Sbjct: 175 MGYDEMIAQKLDLNEFTPAVGQGSVAIEVAEKLDPEVKKQIIDACNHTETSLKLRAERAY 234 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L L+G C + A +G + G +++ DG + +G+ D IG+ A+ + Sbjct: 235 LRVLEGGCSIPVFALATMEGEEIKLKGGIVSLDGSERISLLVSGSASDPEKIGKQLAKEV 294 Query: 297 RFISNKNVFN 306 K + + Sbjct: 295 FAAGGKVILD 304 >gi|224372609|ref|YP_002606981.1| porphobilinogen deaminase [Nautilia profundicola AmH] gi|223588468|gb|ACM92204.1| porphobilinogen deaminase [Nautilia profundicola AmH] Length = 291 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 102/248 (41%), Positives = 150/248 (60%), Gaps = 8/248 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A +S L + H I + ++T GD+I ++ L EIGGKGLF +E Sbjct: 5 IATRGSKLALWQAEWVKSKLEKLG----HEIDLKIVTTTGDKILDKPLAEIGGKGLFIKE 60 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALHSV 126 +E+ L+ G+ AVHS KD PT+ A +P RE + DVF+S ++L +L ++V Sbjct: 61 VEEALLKGDAQIAVHSLKDFPTQYETDHFTLAAIPVREAVEDVFLSENFETLAELPHNAV 120 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSS+RR L +R D+ + D RG ++TR+NKL + K AI+LA+AG+KRL K +K Sbjct: 121 VGTSSIRRAMQLKAFRDDLVITDLRGNVDTRINKLKDGKYDAIILAHAGVKRLGLLKSVK 180 Query: 187 --EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E+L+ + P+ GQGA+ IET +N+PK E VK +N T V ER F+ L+ C Sbjct: 181 YFEVLDTDIMIPAMGQGALGIET-INDPKVIEAVKPLNDFRTQICVTIERDFVDTLNLGC 239 Query: 245 KSAIAGFA 252 + + +A Sbjct: 240 HAPVGVYA 247 >gi|257069787|ref|YP_003156042.1| hydroxymethylbilane synthase [Brachybacterium faecium DSM 4810] gi|256560605|gb|ACU86452.1| hydroxymethylbilane synthase [Brachybacterium faecium DSM 4810] Length = 337 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 139/258 (53%), Gaps = 9/258 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR S LAL + ++L+D H + ++ +ST+GDR L +IGG Sbjct: 1 MTGASLRIGTRASDLALTQSGHVGAALVDGTG---HEVELVHVSTRGDRDRTSPLAQIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L+ G +D VHS KD+PT L+ + ++ Y PRED RD + +L Sbjct: 58 TGVFVTAVRQALLDGTVDVVVHSCKDLPTAPLEEITLACYPPREDPRDALCARDGLTLAQ 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKR 178 L S +GT S RR A LLR R D+ V RG +ETRL + +A A++LA +G++R Sbjct: 118 LPAGSRVGTGSPRRAAQLLRARPDLEVTGIRGNVETRLKRALGPEADLDAVVLAASGLRR 177 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETH----VNNPKAQELVKVINHEDTWDSVNCER 234 + +E VI E+L +E P+P QGA+ +E P E + ++ T +V ER Sbjct: 178 VGREAVISELLPVEVMLPAPAQGALAVEATTAALAQEPWFAERLTAVDDPATRAAVTAER 237 Query: 235 AFLAELDGSCKSAIAGFA 252 L L+ C + +A +A Sbjct: 238 MLLRTLEAGCSAPVAAYA 255 >gi|67924108|ref|ZP_00517554.1| Porphobilinogen deaminase [Crocosphaera watsonii WH 8501] gi|67854033|gb|EAM49346.1| Porphobilinogen deaminase [Crocosphaera watsonii WH 8501] Length = 318 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 104/297 (35%), Positives = 160/297 (53%), Gaps = 5/297 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + + L + P + +ST+GD+I + L +IG KGL Sbjct: 6 RAIRIGSRKSQLALVQTYWIQEQLQKHY--PDRQFDVETMSTQGDKILDVALAKIGDKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKD 120 FT+E+E ++ ++D AVHS KD+PT L +GL + R + D + H + L Sbjct: 64 FTKELETAMLQNQVDFAVHSLKDLPTNLPEGLMLGCVTERVNPADALVVHEKHRDKQLDT 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SVIGTSSLRR A L ++ D RG + TRL KL++ + AI+LA AG++RL Sbjct: 124 LPEGSVIGTSSLRRLAQLRHHYPHLTFKDVRGNVNTRLGKLDSGEYDAIILAVAGLQRLD 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ + + GQGA+ IE +P+ EL+KV+ +T D ERAFL +L Sbjct: 184 MSDRIHQVIPDDISLHAVGQGALGIECRTGDPEILELLKVLEDTETRDRCYAERAFLRQL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +G C+ I + + L G+V + DGK + + G A ++G+ A +R Sbjct: 244 EGGCQVPIGVNTKIENNVLTLIGMVASLDGKTLIKDTIEGEPSQAESLGQTLATRLR 300 >gi|229087029|ref|ZP_04219183.1| Porphobilinogen deaminase [Bacillus cereus Rock3-44] gi|228696292|gb|EEL49123.1| Porphobilinogen deaminase [Bacillus cereus Rock3-44] Length = 309 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 113/293 (38%), Positives = 163/293 (55%), Gaps = 10/293 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + +D K P+ + + TKGD I + TL+++GGKGLF Sbjct: 6 VGSRKSKLALTQT----NWFIDQLKALGLPYEFEVKEIVTKGDVILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S +LA + Sbjct: 62 KEIEHALLTKEIDMAVHSMKDMPAVLPDGLTIGCIPKRVDPRDAFISKNGESFAELAEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 +GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + V Sbjct: 122 TLGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDDV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQGA+ IE ++ +L+ IN T +V+ ER FL +L+G C Sbjct: 182 ITEHLDETLCVPAVGQGALAIECRGDDKDLLQLLSHINDGVTERTVSAERVFLHKLEGGC 241 Query: 245 KSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + IAG+A + + + +V + +G + + + G D +G +AA + Sbjct: 242 QVPIAGYATLQENNEIELTALVGSVEGSVLLKETVTG--MDPEQVGLEAADRL 292 >gi|168178318|ref|ZP_02612982.1| porphobilinogen deaminase [Clostridium botulinum NCTC 2916] gi|182670871|gb|EDT82845.1| porphobilinogen deaminase [Clostridium botulinum NCTC 2916] Length = 290 Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 103/284 (36%), Positives = 155/284 (54%), Gaps = 4/284 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LA L H I ++I T GD+I +L +IGGKGLF Sbjct: 3 FIIATRRSNLAQVQTEIIIDLLNKKHDIKCEKLLI---ETVGDKILEVSLDKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL + Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ GQGA+ IE +PK ++L K ++H ++ V ERAF+ ELDG C Sbjct: 180 TDYFDTKEMVPAIGQGALGIEIMEEHPK-KDLFKDLDHYNSKICVLAERAFMRELDGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 S I +A K + ++ GI + I E++ ++ + + I Sbjct: 239 STIGAYASIKDNIMHIIGIFERKNKIIKKEITGTKDQYEKLGIA 282 >gi|170703456|ref|ZP_02894225.1| porphobilinogen deaminase [Burkholderia ambifaria IOP40-10] gi|170131633|gb|EDT00192.1| porphobilinogen deaminase [Burkholderia ambifaria IOP40-10] Length = 304 Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 101/276 (36%), Positives = 155/276 (56%), Gaps = 3/276 (1%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P ++ I+ ++T+GD+I +RTL+++GGKGLF +E+E L G D AVHS KD+P L Sbjct: 16 PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELENALADGRADLAVHSLKDVPMALPD 75 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 G ++A + RED RD F+S+ SL L +V+GTSSLRR+A+L + V+ RG Sbjct: 76 GFALTAIMEREDPRDAFVSNDYASLDALPPGAVVGTSSLRREAMLRARYPHLDVLPLRGN 135 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 ++TRL+KL+ AI+LA AG+KRL E I+ ++++ED PP+ GQGA+ IE + Sbjct: 136 LDTRLSKLDRGDYAAIILAAAGLKRLGLEARIRTLIDVEDSPPAAGQGALGIEIAAHRTD 195 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 + ++ T +V ER L GSC+ +A A + LY G V +DG+ Sbjct: 196 VAAWLAPLHDPRTALAVEAERMVSRALGGSCEVPLAAHAVWRAGELYLTGRVSTTDGQRV 255 Query: 274 HEVSRNG---NRCDAINIGRDAAQYIRFISNKNVFN 306 G DA+ +GR + + ++ N Sbjct: 256 LTAEECGAVMTVADALALGRAVSDELEAQGALDIVN 291 >gi|298493147|ref|YP_003723324.1| porphobilinogen deaminase ['Nostoc azollae' 0708] gi|298235065|gb|ADI66201.1| porphobilinogen deaminase ['Nostoc azollae' 0708] Length = 322 Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 107/297 (36%), Positives = 159/297 (53%), Gaps = 5/297 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P RIG+R S LAL + + L P + +ST+GD+I + L +IG KGL Sbjct: 9 RPIRIGSRKSQLALVQTYWVQEQLQ--KSFPNITFEVHTMSTQGDKILDVALAKIGDKGL 66 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120 FT+E+E ++I+ EID AVHS KD+PT L +GL ++A RE+ D + H Q ++ Sbjct: 67 FTKELELRMINKEIDFAVHSLKDLPTNLPEGLTLAAITERENPADAVVLHKKHKDQQIET 126 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSSLRR A L + D RG + TR+ KL+ + A++LA AG++RL Sbjct: 127 LPAGAVIGTSSLRRLAQLRYKFPHFTFKDVRGNLITRIGKLDAGEYDALILAVAGLERLD 186 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +IL + + GQGA+ IE ++ + L+K I H T D ER+FL L Sbjct: 187 MSHRIDQILPPDISLHAVGQGALGIECRSDDTEVISLLKAIEHSQTRDRCLAERSFLRVL 246 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +G C+ I L G+V + DG+ + + G DA +G A+ +R Sbjct: 247 EGGCQVPIGVDTQINSKELTLKGLVASVDGQKLVKDTVTGTAADAEKLGAQLARILR 303 >gi|298527685|ref|ZP_07015089.1| porphobilinogen deaminase [Desulfonatronospira thiodismutans ASO3-1] gi|298511337|gb|EFI35239.1| porphobilinogen deaminase [Desulfonatronospira thiodismutans ASO3-1] Length = 313 Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 105/298 (35%), Positives = 160/298 (53%), Gaps = 2/298 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A S L + + + ++ + T GD+I + L ++GGKGLF +E Sbjct: 6 IATRGSKLALWQAEHISSRLRE--RYSGLEVELLKVKTTGDKILDVPLAKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ L+ G D AVHS KDMP +L +GL++ RE DV +S + + L + + Sbjct: 64 IEEALMDGRADIAVHSMKDMPAELPRGLKLGIIPERESRFDVLLSTSYPDISSLPTGATV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A +L R D+ + RG ++TRL KL AI++A AG+ RL Sbjct: 124 GTSSLRRQAQILHMRPDLEIQMLRGNLDTRLRKLKEGIYDAIIVAAAGMSRLNMHADYVT 183 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 L+ F P+ GQGA+ IE + + EL+ ++ T + CERAFLAEL+G C+ Sbjct: 184 ELSPPYFLPAVGQGALGIEYLQDRQELDELLGFMDDFSTRYCIECERAFLAELEGGCQVP 243 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IA + +G+ + G+V G+ S +G DA ++G D A+ + + + Sbjct: 244 IACYCRHEGNNIQATGLVCDLKGERMIRKSVSGKPKDARSLGVDMARQVLEAGGREIL 301 >gi|167042167|gb|ABZ06900.1| putative porphobilinogen deaminase, dipyromethane cofactor-binding domain protein [uncultured marine crenarchaeote HF4000_ANIW93H17] Length = 311 Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 106/292 (36%), Positives = 158/292 (54%), Gaps = 4/292 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F +GTR S L+LA S L K P I ++TKGD T R L I KG+F Sbjct: 3 FLVGTRGSNLSLAQTNWVISELQ--KKNPSSEFEIKTITTKGDTDT-RALFTIDQKGIFE 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EI+K + +ID AVHS KD+P+ + K L I+ RE DV I+ +LK + L + Sbjct: 60 KEIDKAVAEKQIDFAVHSLKDVPSDISKSLTIACVPKRESANDVLITKDGSNLKTIQLSA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR + R R D+ V RG IETR+NK+ + K AI+LA AGI RL + V Sbjct: 120 VVGTSSLRRAVQVSRIRPDVVVKPVRGNIETRINKVIDGKFDAIILAEAGISRLGLD-VK 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +L+ +DFPPSPGQGA+ I ++ K ++K I + + + ERA ++ C+ Sbjct: 179 HSVLSTKDFPPSPGQGALAIVCRADDDKTISMLKKIEDKKSRIEIEAERALSDYVESGCR 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + A L + DGKI ++ + G+ + N+G++ + ++ Sbjct: 239 FPVGALAIANSGMLKLTVSAYSVDGKISIKLEKTGDVDNPKNLGQELGKELK 290 >gi|300774730|ref|ZP_07084593.1| hydroxymethylbilane synthase [Chryseobacterium gleum ATCC 35910] gi|300506545|gb|EFK37680.1| hydroxymethylbilane synthase [Chryseobacterium gleum ATCC 35910] Length = 302 Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 107/297 (36%), Positives = 159/297 (53%), Gaps = 16/297 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LAL A E L + + + I+P+ + GD+ N+ L +G G+ Sbjct: 2 KSIRIGTRNSALALWQAREVARHLQNNNYLTE----IVPIVSSGDKNLNQPLYSLGITGV 57 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT +++ L++ EID AVHS KD+PT+L + +++ AYL R+ +D+ I +S ++ Sbjct: 58 FTRDLDIALLNDEIDIAVHSLKDVPTQLPQNIEMIAYLERDYPQDILIRK--ESSRNKEF 115 Query: 124 HSV-IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 H + + TSSLRR+A LR D RG I+TRL KL A +L+ AGIKR+K E Sbjct: 116 HELKLATSSLRRRAFWLRNYPTAEFSDIRGNIQTRLQKLEEGDFDATILSLAGIKRMKME 175 Query: 183 KVIKEILNIEDFP---PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 ++ E P +P QG I + H + P+ E+V+ INH++T V ER FL+ Sbjct: 176 ------IDYEMLPLMISAPSQGVISVAGHTDKPEINEIVRQINHQETQICVEIERNFLST 229 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L+G C + I FA G + F + + DGK V N A N G A+ + Sbjct: 230 LEGGCTAPIGAFAEIIGDQIRFKAALCSLDGKNCIAVDENFVYTPAENFGEKYAKVV 286 >gi|167569219|ref|ZP_02362093.1| porphobilinogen deaminase [Burkholderia oklahomensis C6786] Length = 280 Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 102/264 (38%), Positives = 156/264 (59%), Gaps = 2/264 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P +L +G ++A + RED RD F+S+ SL +L +V+ Sbjct: 74 LENALADGRADLAVHSLKDVPMELPEGFALAAVMSREDPRDAFVSNAYASLAELPAGAVV 133 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+ Sbjct: 134 GTSSLRREAMLRARYPQLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L+++D P+ GQGA+ IE + ++ T +V ERA L GSC+ Sbjct: 194 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDCATALAVEAERAVSRALGGSCEVP 253 Query: 248 IAGFAYCKGSTLYFYGIVLASDGK 271 +A A +G L+ G V +DG+ Sbjct: 254 LAAHAVWRGDELHLTGSVSTTDGR 277 >gi|325282435|ref|YP_004254976.1| Porphobilinogen deaminase [Deinococcus proteolyticus MRP] gi|324314244|gb|ADY25359.1| Porphobilinogen deaminase [Deinococcus proteolyticus MRP] Length = 310 Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 101/290 (34%), Positives = 157/290 (54%), Gaps = 5/290 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD--RITNRTLTEIGGKGLFT 65 +GTR S LAL+ L + P I ++TKGD R + +++ + G KG + Sbjct: 6 VGTRGSTLALSQTRWVVERLK--EQWPETEFRIQTITTKGDKNRASLQSMAKAGDKGFWI 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLALH 124 +EI+ L++ ID AVHS KD+PT+ +GL I++ R D RDV + +SL DL Sbjct: 64 KEIQDALLAKSIDIAVHSLKDLPTEQTEGLDIASIPKRADARDVLVGAEGFKSLADLPQG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGTSS+RR+A L +R D+ VI RG IETR+ + ++ A++LA AG+ R + Sbjct: 124 ARIGTSSVRRRAFLKAFRPDLQVIPVRGNIETRMAAVASDDYDAVILAGAGLIRTDQRHR 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E ++ + P+PGQGA+ +E ++ E+ IN T D + ER FLA L C Sbjct: 184 ADEFVSTDILLPAPGQGALALEVRADDDLIAEVAYAINDAVTDDRITAEREFLAGLGAGC 243 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 + + FA KG L G V A DG + + +G+ + ++G + A+ Sbjct: 244 LAPVGAFATVKGDLLTLEGWVGAVDGSEVIKATTSGDASECADLGAELAE 293 >gi|332968975|gb|EGK08019.1| hydroxymethylbilane synthase [Kingella kingae ATCC 23330] Length = 312 Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 107/305 (35%), Positives = 164/305 (53%), Gaps = 7/305 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LA+ A ++ L ++ P I I+ ++T+GD+I ++TL++IGGKGL Sbjct: 5 KKLTIASRESALAMWQARHIQAQLQALY--PDCQIDILGMTTQGDQILDKTLSKIGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L D AVHS KD+P L +G + A R + D F+S+ L+DL Sbjct: 63 FIKELETALQENRADLAVHSIKDVPMDLPEGFALVAIGERANPFDAFVSNQYARLEDLPQ 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+A L +++ RG ++TRL KL+N AI+LA AG++RL+ + Sbjct: 123 GAIVGTSSLRREAQLRARFPHLNIKPLRGNVQTRLAKLDNGDYDAIILAAAGLERLELHE 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ +L+ D P+ GQGA+ IE + + + +NH T V ERA L GS Sbjct: 183 RIRSVLSPADSLPAAGQGALGIEIAAHRADLVQTLLPLNHAKTAACVTAERALARALGGS 242 Query: 244 CKSAIAGFAYCKG---STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C+ +A AYC L +G+V DG + V A +GR A+ + Sbjct: 243 CQVPLA--AYCTADDNGVLTLHGLVAHPDGSVMLTVQAQAPAEYADALGRAVAKKLADDG 300 Query: 301 NKNVF 305 K+V Sbjct: 301 AKDVI 305 >gi|262038272|ref|ZP_06011662.1| hydroxymethylbilane synthase [Leptotrichia goodfellowii F0264] gi|261747739|gb|EEY35188.1| hydroxymethylbilane synthase [Leptotrichia goodfellowii F0264] Length = 316 Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 112/309 (36%), Positives = 164/309 (53%), Gaps = 22/309 (7%) Query: 8 IGTRCSPLALAHAFETRSSLM----------------DVHKIPPHNIVIIPLSTKGDRIT 51 IGTR S LALA A + + L+ D +K I + + T GD+ Sbjct: 8 IGTRGSILALAQAEKVKEMLIAKYDELRKKEDFKGISDFNKNESLTIELKIIVTTGDKDL 67 Query: 52 NRTLTEIGG---KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRD 108 R +I G K LF +EIEK+++ +ID AVHS KDMP + +GL + + RED RD Sbjct: 68 -RDFDKIKGTTQKELFVKEIEKEMLENKIDFAVHSLKDMPQQTPEGLLNACFPLREDNRD 126 Query: 109 VFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA 168 V +S + + L +L SVIGT S+RR+ LL R DI + RG I TRL KL+N + A Sbjct: 127 VIVSKSGKKLNELREKSVIGTGSIRRETELLNLRKDIIIKPIRGNIHTRLKKLDNGEYDA 186 Query: 169 ILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD 228 I+LA AG+KR I E E F P+PGQG +CI+ N+ + +EL+++IN ++ Sbjct: 187 IILAAAGLKRTGLSDRITEYFEDEVFMPAPGQGILCIQCRENDDRIRELLEIINDKEVGI 246 Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 ER F DG C + I + +G+TL G+ +IF E+ G++ + I Sbjct: 247 MCETEREFSRIFDGGCHTPIGCSSTIEGNTLKLKGVYNKDGKRIFSEIE--GDKNNPKEI 304 Query: 289 GRDAAQYIR 297 + A+ I+ Sbjct: 305 AQKLAKEIK 313 >gi|303326737|ref|ZP_07357179.1| hydroxymethylbilane synthase [Desulfovibrio sp. 3_1_syn3] gi|302862725|gb|EFL85657.1| hydroxymethylbilane synthase [Desulfovibrio sp. 3_1_syn3] Length = 310 Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 110/284 (38%), Positives = 151/284 (53%), Gaps = 3/284 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K I TR S LAL A +S L + P + + + TKGD I + L+++GGKG Sbjct: 2 RKHLVIATRGSRLALWQAEHVKSRLE--AQDPGLTVSLNVIKTKGDIILDVPLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L+ G D AVHS KD+P L +GL + RE D F+S L Sbjct: 60 LFVKEIEEALLDGRADLAVHSIKDVPMVLPEGLILGCVPQREACTDCFLSVHYADPDALP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR+A LL R D+ + RG ++TRL KL N + AI+LA AG+ RL Sbjct: 120 QKAHVGTSSLRRQAQLLSMRPDLRISSLRGNVDTRLRKLQNGEYDAIILASAGLNRLGLS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 L+ E F P+ GQGA+ IE +N L+ + + T V+ ER FLA L+G Sbjct: 180 APYMAPLDPERFLPAVGQGALGIECREDNYDLLVLLASLENRATRVCVDAERGFLAGLEG 239 Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA 285 C+ IAG A T+ G+V DG + +NGN DA Sbjct: 240 GCQVPIAGHARLVDEETVSLKGLVAEVDGSLILRGEKNGNAADA 283 >gi|172061376|ref|YP_001809028.1| porphobilinogen deaminase [Burkholderia ambifaria MC40-6] gi|171993893|gb|ACB64812.1| porphobilinogen deaminase [Burkholderia ambifaria MC40-6] Length = 304 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 101/276 (36%), Positives = 154/276 (55%), Gaps = 3/276 (1%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P ++ I+ ++T+GD+I +RTL+++GGKGLF +E+E L G D AVHS KD+P L Sbjct: 16 PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELENALADGRADLAVHSLKDVPMALPD 75 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 G ++A + RED RD F+S+ SL L +V+GTSSLRR+A+L + V+ RG Sbjct: 76 GFALTAIMEREDPRDAFVSNDYASLDALPAGAVVGTSSLRREAMLRARYPHLDVLPLRGN 135 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 ++TRL KL+ AI+LA AG+KRL E I+ ++++ED PP+ GQGA+ IE + Sbjct: 136 LDTRLAKLDRGDYAAIILAAAGLKRLGLEARIRTLIDVEDSPPAAGQGALGIEIAAHRTD 195 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 + ++ T +V ER L GSC+ +A A + LY G V +DG+ Sbjct: 196 VAAWLAPLHDPKTALAVEAERMVSRALGGSCEVPLAAHAVWRAGELYLTGRVSTTDGQRV 255 Query: 274 HEVSRNG---NRCDAINIGRDAAQYIRFISNKNVFN 306 G DA+ +GR + + ++ N Sbjct: 256 LTAEECGAVMTIADALALGRAVSDELEAQGALDIVN 291 >gi|83720099|ref|YP_441428.1| porphobilinogen deaminase [Burkholderia thailandensis E264] gi|257139896|ref|ZP_05588158.1| porphobilinogen deaminase [Burkholderia thailandensis E264] gi|123740194|sp|Q2T071|HEM3_BURTA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|83653924|gb|ABC37987.1| porphobilinogen deaminase, putative [Burkholderia thailandensis E264] Length = 329 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 103/263 (39%), Positives = 153/263 (58%), Gaps = 2/263 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P +L G ++A + RED RD F+S+ SL L +V+ Sbjct: 74 LESALADGRADLAVHSLKDVPMELPAGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+ Sbjct: 134 GTSSLRREAMLRARYPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L++ED P+ GQGA+ IE + ++ T +V ERA L GSC+ Sbjct: 194 LLDVEDSLPAAGQGALGIEIAAGRADVAAWLAPLHDHATALAVEAERAVSRALGGSCEVP 253 Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270 +A A +G L+ G V +DG Sbjct: 254 LAAHAVWRGDELHLTGSVSTTDG 276 >gi|218295973|ref|ZP_03496753.1| porphobilinogen deaminase [Thermus aquaticus Y51MC23] gi|218243711|gb|EED10239.1| porphobilinogen deaminase [Thermus aquaticus Y51MC23] Length = 303 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 107/295 (36%), Positives = 155/295 (52%), Gaps = 18/295 (6%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG-----KG 62 +GTR S LALA L + P + + T+GD GG + Sbjct: 6 VGTRGSALALAQTRWVVERLKE--SWPEAEFKVKTIRTRGD----------GGADPREQA 53 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F +E+++ L++ EID AVHS KD+PT+ KGL+I+A R+D RD F+ + L+DL Sbjct: 54 IFVKELQEALLAREIDIAVHSLKDLPTEEPKGLKIAAIPRRQDPRDAFLGKAFKRLEDLP 113 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSS+RRKA +L R D+ V D RG ++TRL L + AI+LA AG+ RL Sbjct: 114 PGAVVGTSSIRRKAQILAHRPDLVVKDLRGNVDTRLAALGGGEYDAIILAAAGLIRLDLR 173 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + L E P+PGQGA+ +E + A+EL ++H + D V ERAFL L Sbjct: 174 NRIDQFLEPEVMLPAPGQGALALEVRQGDDLAEELSYALHHHASHDRVRAERAFLRGLGA 233 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C + + A + TL G + A DGK F G +A +G + A+ I Sbjct: 234 GCLAPVGALAQVGEDGTLVLEGGIFAPDGKSFIRAEIEGEASEAEELGLELARDI 288 >gi|323525182|ref|YP_004227335.1| porphobilinogen deaminase [Burkholderia sp. CCGE1001] gi|323382184|gb|ADX54275.1| porphobilinogen deaminase [Burkholderia sp. CCGE1001] Length = 349 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 108/293 (36%), Positives = 164/293 (55%), Gaps = 7/293 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 I +R S LA+ A R +L HK+ P ++ I+ ++T+GD+I +RTL+++GGKGLF + Sbjct: 15 IASRESRLAMWQAEHVRCAL---HKLYPSCDVKILGMTTRGDQILDRTLSKVGGKGLFVK 71 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 E+E L G D AVHS KD+P +L G ++ + RED RD +S+ SL L +V Sbjct: 72 ELEAALADGRADLAVHSLKDVPMELPAGFALATIMEREDPRDALVSNDYDSLAALPAGAV 131 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL + I+ Sbjct: 132 VGTSSLRREAMLRMRYPHLEVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAERIR 191 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 +L+ ED P+ GQGA+ IE + + ++HE T +V ER L GSC+ Sbjct: 192 ALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHEHTAAAVEAERMVSRALGGSCEV 251 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYI 296 +A +A L+ G+V DG+ H + A+ +GR+ A + Sbjct: 252 PLAAYATWHDGALHLRGVVATPDGQRVLSAHASAPAPTTERAVALGREVASAL 304 >gi|284053907|ref|ZP_06384117.1| porphobilinogen deaminase [Arthrospira platensis str. Paraca] Length = 322 Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 105/299 (35%), Positives = 158/299 (52%), Gaps = 5/299 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + RI +R S LAL + + L + P + +ST+GD+I + L +IG K Sbjct: 8 QTRTIRIASRKSQLALVQTYWVQEELQ--KRFPDIKFEVHTMSTQGDKILDVALAKIGDK 65 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118 GLFT+E+E +++ + D AVHS KD+PT L +GL + RED D + +H + L Sbjct: 66 GLFTKELEVGMLNHDTDMAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVHENHRDKQL 125 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L +V+GTSSLRR A L + D RG + TRL KL+ + AI+LA AG+KR Sbjct: 126 DTLPPGAVVGTSSLRRLAQLRHNFPHLEFKDIRGNLNTRLQKLDEGQYDAIILAVAGLKR 185 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L I +++ E + GQGA+ IE + + E+VK + H T + ERAFL Sbjct: 186 LGMADRIHQVIPAEISLHAVGQGALGIECREGDTEILEVVKALEHTATAQRCHSERAFLR 245 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I +G L G+V + DGK + + G DA +G + A ++ Sbjct: 246 ELEGGCQVPIGVNTMVEGDRLTLTGMVASLDGKRLIKDTVTGQASDAEQLGIELANQLK 304 >gi|298369901|ref|ZP_06981217.1| hydroxymethylbilane synthase [Neisseria sp. oral taxon 014 str. F0314] gi|298281361|gb|EFI22850.1| hydroxymethylbilane synthase [Neisseria sp. oral taxon 014 str. F0314] Length = 311 Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 98/273 (35%), Positives = 159/273 (58%), Gaps = 2/273 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL++IGG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFIKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPKGTIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + +++K +NH+ T V ERA L Sbjct: 179 LDERIRLILSEADSLPAAGQGALGIEIASHRTDLLDVLKPLNHDITRACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 GSC+ +A + + L G+V DG + Sbjct: 239 GGSCQVPLAAYCTEEDGLLTLRGLVGHPDGSVI 271 >gi|325133945|gb|EGC56601.1| porphobilinogen deaminase [Neisseria meningitidis M13399] gi|325143900|gb|EGC66212.1| porphobilinogen deaminase [Neisseria meningitidis M01-240013] gi|325206609|gb|ADZ02062.1| porphobilinogen deaminase [Neisseria meningitidis M04-240196] Length = 311 Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 102/296 (34%), Positives = 164/296 (55%), Gaps = 2/296 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYTRLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ + P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 179 LDGRIRMILSESESLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKL 294 >gi|257452372|ref|ZP_05617671.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_5R] gi|317058915|ref|ZP_07923400.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_5R] gi|313684591|gb|EFS21426.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_5R] Length = 299 Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 107/298 (35%), Positives = 165/298 (55%), Gaps = 6/298 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL--TEI 58 M K+ +G+R S LALA + L H P + I + T+GD+ + ++ Sbjct: 1 MSKQQIILGSRGSILALAQTNWVKEQLEKYH--PELSFSIQIIETQGDKDLHSHFGNSQS 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 K FT+EIEK L+ GEID AVHS KD+P+ GL A RED+RDV IS + + L Sbjct: 59 SLKSFFTKEIEKSLLEGEIDIAVHSMKDVPSVSPAGLICGAIPIREDVRDVLISRSGKPL 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L ++IGTSSLRR + + R D+ + RG I TRL KL + AI+LA AG+KR Sbjct: 119 AELPQGAIIGTSSLRRIQNIKKIRPDLEIKALRGNIHTRLRKLEEEQYDAIILAAAGLKR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 +K E+ I E L+ FPP+P QGA+ I+ + + Q++++ I++++ + ER F Sbjct: 179 VKLEEKITEYLDPTVFPPAPAQGALYIQCREEDIEVQKILQSIHNKNLEKVLVVEREFSK 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 DG C + + ++ +G TL F+ + + + +V N ++ +I R AAQ I Sbjct: 239 IFDGGCHTPMGCYSNLQGDTLEFFAMYSHENKRYQTKVVENLSKGK--DIARMAAQKI 294 >gi|83282130|ref|XP_729634.1| porphobilinogen deaminase [Plasmodium yoelii yoelii str. 17XNL] gi|23488022|gb|EAA21199.1| porphobilinogen deaminase, putative [Plasmodium yoelii yoelii] Length = 583 Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 111/339 (32%), Positives = 181/339 (53%), Gaps = 49/339 (14%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVII--PLSTKGDRITNRTLTEIGGK 61 K IGTR SPLA+ + + + L+ K NI +I P+ T GD+I ++T+ GGK Sbjct: 71 KEIIIGTRNSPLAIKQSEKVKKKLLTYFKKINENINVILKPIKTTGDKILDKTVGSFGGK 130 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT+E++++LI +D VHS KD+PT L + +S +L R+ I D F+S ++L+D+ Sbjct: 131 GIFTKELDEELIKNNVDICVHSLKDIPTVLPDNIHLSCFLKRDTINDAFLSIKYKNLRDI 190 Query: 122 ALHS-----------VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAIL 170 L S I TSSLRR + + ++ + RG I TR+ KL NN +I+ Sbjct: 191 NLSSHVIDKEIDLPRTIATSSLRRTSQIRYKYKNLKLKFIRGNINTRIAKLFNNSFDSII 250 Query: 171 LAYAGIKRLKKEKVIKEIL--NIED--------------------------FPPSPGQGA 202 +A+ G++RL +K++++I+ NI+D P+ QG Sbjct: 251 IAFCGLERLVSKKILRQIMKNNIKDKSYIINYKNISIDLRHLNIQKLNTNIMCPALCQGI 310 Query: 203 ICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFY 262 I + ++ NNP+ +++K IN+E + N ERAFL ++DGSC I G+ + ++F Sbjct: 311 IGVTSNKNNPEISQILKNINNEKSQIMANIERAFLQKIDGSCTMPIGGYTKFSKNKIFFN 370 Query: 263 GIVLASDG----KIFHEVSRNGNRCDAINIGRDAAQYIR 297 I+ +G KI +V R+ N D I +AA+ I+ Sbjct: 371 AIINDINGLENYKI--KVVRHLNDLDG--IADEAAEKIK 405 >gi|170078218|ref|YP_001734856.1| porphobilinogen deaminase [Synechococcus sp. PCC 7002] gi|169885887|gb|ACA99600.1| porphobilinogen deaminase [Synechococcus sp. PCC 7002] Length = 321 Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 106/296 (35%), Positives = 160/296 (54%), Gaps = 6/296 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ RIG+R S LAL + R L + P + + T+GD++ + L++IG KG Sbjct: 8 KRTVRIGSRKSQLALVQTYWVRDELQKAY--PEITFEVQTMETQGDKVLDVALSKIGDKG 65 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119 LFT+E+E ++ GE D AVHS KD+PT L +GL + R D D + H + L+ Sbjct: 66 LFTQELEDGMLKGETDFAVHSLKDLPTNLPEGLMLGCVTERVDPADALVVNEKHRDKKLE 125 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L SVIGTSSLRR A L + D RG + TRL KL+ + AI+LA AG++RL Sbjct: 126 TLPSGSVIGTSSLRRLAQLRHHFPHLEFKDIRGNVNTRLAKLDRGEYDAIILAAAGLQRL 185 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLA 238 I +I++ + + GQGA+ IE + + L++ V+ H ++ D ER+FL Sbjct: 186 DFGDRIHQIISSDISLHAVGQGALGIECRDGDEEILGLLRPVLEHAESRDRCYAERSFLR 245 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 +L+G C+ I +G L G+V + DG+ +G+R DA +G + AQ Sbjct: 246 QLEGGCQVPIGVNTTIEGDRLTLVGMVASLDGQTLIRDEVSGSRADAEKLGIELAQ 301 >gi|241766973|ref|ZP_04764769.1| porphobilinogen deaminase [Acidovorax delafieldii 2AN] gi|241362537|gb|EER58429.1| porphobilinogen deaminase [Acidovorax delafieldii 2AN] Length = 244 Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 93/240 (38%), Positives = 141/240 (58%), Gaps = 4/240 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P I TR S LAL A ++ L + H + ++ ++T+GD+I +R+L+++GGKGLF Sbjct: 8 PLVIATRESRLALWQAEHVQALL----RARGHTVSLLGMTTQGDQILDRSLSKVGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G AVHS KD+P +L +G ++ + RED RD F+S SL+ L Sbjct: 64 VKELEVALEEGRAHIAVHSLKDVPMELPEGFALACVMEREDPRDAFVSPRYASLEALPQG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL ++ Sbjct: 124 AVVGTSSLRRQVLLQALRPDLRIEPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGLQER 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ P+ GQGA+ IE + E + + H++TW +V ERA + GSC Sbjct: 184 IRTEFATTAMLPAAGQGALGIEIRSDRQDLIEALAPLAHQETWLTVTAERAVSRAMGGSC 243 >gi|73662403|ref|YP_301184.1| porphobilinogen deaminase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123761533|sp|Q49YA2|HEM3_STAS1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|72494918|dbj|BAE18239.1| porphobilinogen deaminase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 308 Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 165/291 (56%), Gaps = 6/291 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + L + P I I + TKGD I ++ L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQSRQFIDKLKAID--PSLEIEIKEIVTKGDLIVDKQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+ +L + ID A+HS KD+P+ + GL + RE+ D +I+ L +L +S++ Sbjct: 64 IQNELFNHGIDMAIHSLKDVPSVIPDGLTLGCIPDRENPYDAYIAKNHVPLNELPDNSIV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L + + RG I+TRLNKL AI+LA AG+KR+ + ++ Sbjct: 124 GTSSLRRGAQILAKYPKLQIKWIRGNIDTRLNKLETEDYDAIILAAAGLKRMGWSDDIVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ E P+ GQGA+ IE ++ L+ ++++D D V ER FL ++GSC+ Sbjct: 184 SYLDKETLIPAIGQGALGIECRSDDETLLSLLSKVHNQDVADCVTAERTFLTRMNGSCQV 243 Query: 247 AIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I G+A + T+ F G++++ DGK ++ + G D + +G + + + Sbjct: 244 PIGGYATKEADGTIEFTGLIMSPDGKERYQHTVRGT--DPVALGEEVTKVL 292 >gi|313901219|ref|ZP_07834707.1| hydroxymethylbilane synthase [Clostridium sp. HGF2] gi|312954177|gb|EFR35857.1| hydroxymethylbilane synthase [Clostridium sp. HGF2] Length = 299 Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 107/277 (38%), Positives = 153/277 (55%), Gaps = 2/277 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LALA E ++ L + P H+ I ++TKGDRI + L ++ KG+F Sbjct: 3 IRMGTRGSALALAQCNEVKALLEKAY--PQHSFEICVITTKGDRIQHVALDQMKDKGIFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE++L+ ID AVHS KDMP+ L + L + L RED RDV + A SL+ L LH+ Sbjct: 61 KEIEQQLLEHTIDLAVHSMKDMPSVLDERLCFTETLLREDARDVLVLRNAASLESLPLHA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 I T S RR+ LLR R D+ ++ RG IETRL KL + + I+LA AG+KRL+ + I Sbjct: 121 RIATGSKRRRFQLLRQREDLEIVGIRGNIETRLKKLEDQQLDGIVLAAAGLKRLQLAQYI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L P+ QGAI IE H ELV + + + V ERAFL EL+G C Sbjct: 181 TQTLPEHIMVPAVAQGAIAIEVHKKRNDLVELVNALCTKRVDEEVCAERAFLQELNGGCH 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 + + + + + + DG ++ +G R Sbjct: 241 TPLGARCILHEADAELFAVYGSEDGTRLFDLHVSGPR 277 >gi|92115224|ref|YP_575152.1| hydroxymethylbilane synthase [Chromohalobacter salexigens DSM 3043] gi|91798314|gb|ABE60453.1| hydroxymethylbilane synthase [Chromohalobacter salexigens DSM 3043] Length = 311 Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 99/267 (37%), Positives = 149/267 (55%), Gaps = 4/267 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LAL A ++ L+ +H P + ++ ++T+GD+I + L ++GGKGLF Sbjct: 4 LRIATRQSRLALWQAEHVKARLLALH--PGLEVELVAMTTRGDKILDSPLAKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ G D AVHS KD+P +GL +S L D F+S+ SL L Sbjct: 62 KELEEALLDGRADIAVHSMKDVPMHFPEGLGLSVILESGAPTDAFVSNDYASLDALPEGV 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR + R D+ V++ RG ++TRL KL+ + AI+LA +G++RL+ I Sbjct: 122 RVGTSSLRRGLQVKEARPDLEVLNLRGNVQTRLGKLDGGEFEAIILATSGLQRLELGHRI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE ++ EL+ ++H T V ERA LDG C+ Sbjct: 182 TQELPPEVSLPACGQGALGIECRHDDESLLELLAPLDHPQTATRVRAERAMNTRLDGGCQ 241 Query: 246 SAIAGFAYCKGS--TLYFYGIVLASDG 270 I G+A + TL+ +V DG Sbjct: 242 VPIGGYAVLEDGDRTLWLRALVGDPDG 268 >gi|300866645|ref|ZP_07111332.1| porphobilinogen deaminase [Oscillatoria sp. PCC 6506] gi|300335354|emb|CBN56492.1| porphobilinogen deaminase [Oscillatoria sp. PCC 6506] Length = 323 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 107/297 (36%), Positives = 158/297 (53%), Gaps = 5/297 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + + L + P + +ST+GD+I + L +IG KGL Sbjct: 10 RTVRIGSRKSQLALVQTYWVQEQLQ--QRFPQCTFEVHTMSTQGDKILDVPLAKIGDKGL 67 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120 FT+E+E ++S E D AVHS KD+PT L +GL + RE+ D + +H + L+ Sbjct: 68 FTKELEVGMLSNETDFAVHSLKDLPTNLPEGLILGCVSERENPADALVVHANHQDKQLET 127 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSSLRR A L + D RG + TRL KL+ + AI+LA AG++RL Sbjct: 128 LPPGAVIGTSSLRRLAQLRHHFPHLEFKDIRGNLNTRLAKLDEGEYDAIILAVAGLQRLG 187 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + +I++ E + GQGA+ IE + EL+K + H +T ERAFL EL Sbjct: 188 MGDRVHQIISPEISLHAVGQGALGIECRAGDDDILELIKALEHTETAQRCYAERAFLREL 247 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +G C+ I +G L G+V + DG+ + + G A +G D A +R Sbjct: 248 EGGCQVPIGVNTKIEGDQLTLTGLVASLDGQRLIKDTVTGAAATAELLGIDLAHRLR 304 >gi|167618302|ref|ZP_02386933.1| porphobilinogen deaminase [Burkholderia thailandensis Bt4] Length = 278 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 103/263 (39%), Positives = 153/263 (58%), Gaps = 2/263 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P +L G ++A + RED RD F+S+ SL L +V+ Sbjct: 74 LESALADGRADLAVHSLKDVPMELPTGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+ Sbjct: 134 GTSSLRREAMLRARYPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L++ED P+ GQGA+ IE + ++ T +V ERA L GSC+ Sbjct: 194 LLDVEDSLPAAGQGALGIEIAAGRADVAAWLAPLHDHATALAVEAERAVSRALGGSCEVP 253 Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270 +A A +G L+ G V +DG Sbjct: 254 LAAHAVWRGDELHLTGSVSTTDG 276 >gi|319792195|ref|YP_004153835.1| porphobilinogen deaminase [Variovorax paradoxus EPS] gi|315594658|gb|ADU35724.1| porphobilinogen deaminase [Variovorax paradoxus EPS] Length = 308 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 95/248 (38%), Positives = 140/248 (56%), Gaps = 4/248 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A ++ L + H + ++ ++T+GD+I +++L+++GGKGLF +E Sbjct: 13 IATRESRLALWQAEHVQALLQERG----HTVSLLGMTTRGDQILDKSLSKVGGKGLFVKE 68 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E + G D AVHS KD+P L +G ++ L RED RD +S SL +L +V+ Sbjct: 69 LETAIEDGRADIAVHSLKDVPMDLPEGFVLACVLEREDPRDAMVSPRYASLDELPHGAVV 128 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL E I+ Sbjct: 129 GTSSLRRVVLLKARRPDVRIEPLRGNLDTRLRKLDEGQYDAIILAAAGLKRLGLEDRIRV 188 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +D P+ GQGA+ IE + EL+ + H W S ERA + GSC Sbjct: 189 AFEPDDMLPAAGQGALGIEVRADREDLIELLAPLAHRGDWLSTAAERAVSRAMGGSCSMP 248 Query: 248 IAGFAYCK 255 +A A + Sbjct: 249 LAAHARWQ 256 >gi|332531340|ref|ZP_08407248.1| porphobilinogen deaminase [Hylemonella gracilis ATCC 19624] gi|332039204|gb|EGI75622.1| porphobilinogen deaminase [Hylemonella gracilis ATCC 19624] Length = 323 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 105/269 (39%), Positives = 151/269 (56%), Gaps = 19/269 (7%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A + L + H + ++ ++T+GD+I +R L+++GGKGLF +E Sbjct: 7 IATRESRLALWQAEHVQGLL----RQQGHAVTLLGMTTQGDQILDRALSKVGGKGLFVKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P +L +G ++A L RED RD ++S L DL +++ Sbjct: 63 LEVALDEGRADLAVHSLKDVPMELPEGFVLAAVLEREDERDAWVSPHCAGLADLPSGAIV 122 Query: 128 GTSSLRRKALL---LR--WRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 GTSSLRR LL LR R D+ + RG ++TRL KL+ + HAI+LA AG+KRL Sbjct: 123 GTSSLRRVVLLREALRALGRDDVRIEPLRGNLDTRLRKLDEGQYHAIVLAAAGLKRLGLA 182 Query: 183 KVIKEILNIEDFPPSPGQGAICIE-THVNNPKAQELVKVIN---HEDTWDSVNCERAFLA 238 I++I E+ P+ GQGA+ IE H + L + ++ H+ TW V ERA Sbjct: 183 ARIRKIFTPEEMLPAAGQGALGIEIKHGATAQTAALEQALSNLAHQPTWLRVAAERAVSR 242 Query: 239 ELDGSCKSAIAGFA------YCKGSTLYF 261 + GSC +A A KG+TL Sbjct: 243 AMGGSCSMPLAAHAAFVSSPAPKGATLRL 271 >gi|119511003|ref|ZP_01630124.1| porphobilinogen deaminase [Nodularia spumigena CCY9414] gi|119464348|gb|EAW45264.1| porphobilinogen deaminase [Nodularia spumigena CCY9414] Length = 323 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 108/297 (36%), Positives = 158/297 (53%), Gaps = 5/297 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + R L P + + +ST+GD I + L +IG KGL Sbjct: 10 RTIRIGSRKSQLALVQTYWVRDQLQ--KSFPDISFEVHTMSTQGDNILDVALAKIGDKGL 67 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKD 120 FT+E+E +++ EID AVHS KD+PT L GL ++ RE+ D + H + ++ Sbjct: 68 FTKELEVGMLNQEIDFAVHSLKDLPTNLPSGLTLAVITERENPADALVVHDKYKDKQIET 127 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSSLRR A L + D RG + TRL KL++ + A++LA AG++RL Sbjct: 128 LPAGAVIGTSSLRRLAQLRNKFPHFTFKDVRGNLNTRLKKLDSGEYDALILAAAGLERLG 187 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +IL E + GQGA+ IE ++ + ++K I H +T D ERAFL L Sbjct: 188 MSDRIHQILPKEISLHAVGQGALGIECRADDKEIINILKAIEHSETRDRCLAERAFLRIL 247 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +G C+ I G L GIV + DG+ + + G DA +G + A +R Sbjct: 248 EGGCQVPIGVNTVIDGDNLTLTGIVASVDGQKLVKDTVTGAAKDAEKLGAELAALLR 304 >gi|167746868|ref|ZP_02418995.1| hypothetical protein ANACAC_01580 [Anaerostipes caccae DSM 14662] gi|167653828|gb|EDR97957.1| hypothetical protein ANACAC_01580 [Anaerostipes caccae DSM 14662] Length = 292 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 104/298 (34%), Positives = 161/298 (54%), Gaps = 8/298 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVH-KIPPHNIVIIPLSTKGDRITNRTLTEIG 59 ME K RIG+R S LA+A +TR + + P + ++ L T GD+I N+TL +IG Sbjct: 1 MEPKRLRIGSRESLLAVA---QTRLVIEQLKANYPELSFELVTLKTTGDKILNKTLDKIG 57 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+++ L+ G ID AVHS KD+P ++ L ++A R D RDV + ++ + Sbjct: 58 GKGLFVKELDQALLDGRIDMAVHSMKDLPMEISDDLPVAAVPKRGDPRDVLVLPSSGDFE 117 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 + VIG+SS RR + R + RG I TRL KL+ + ++++A AG+KR Sbjct: 118 EFG--QVIGSSSARRVLQVRRLFPEAEFQSIRGNIHTRLRKLDKGQYSSLIMAAAGLKRA 175 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 ++ I ++E+ P+ GQG +C++ V Q L I+ +T ER+F+ Sbjct: 176 GLKERISRYFSVEEMLPAAGQGTLCVQ--VRKDFDQSLFSCIHDRETELVTEAERSFVRA 233 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 LDG C S IA +A GS L G+ + ++S G DA +GR A+ I+ Sbjct: 234 LDGGCSSPIAAYAEITGSDLCLTGLYYNAADNTGRKMSITGKAQDAGGLGRRLAEQIQ 291 >gi|311031438|ref|ZP_07709528.1| porphobilinogen deaminase [Bacillus sp. m3-13] Length = 310 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 115/301 (38%), Positives = 167/301 (55%), Gaps = 6/301 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL L + P + + + TKGD+I + TL+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQTNWVIDQLKALG--APFDFEVKEIVTKGDQILDVTLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ ++ +ID AVHS KDMP L +GL I RED RD FIS DL S++ Sbjct: 64 IEQAMLDKDIDMAVHSMKDMPAVLPEGLTIGCIPFREDHRDAFISKDHVKFADLPSGSIV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-VIK 186 GTSSLRR A LL R D+ + RG I+TRL KL N AI+LA AG+ R+ K V+ Sbjct: 124 GTSSLRRGAQLLAKRPDLEIKWIRGNIDTRLAKLQNEDYDAIILAAAGLARMGWSKDVVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E L+ + P+ GQGA+ IE ++ E++K+ T +V ERAFL +++G C+ Sbjct: 184 EFLDEDLCLPAVGQGALSIECREDDADLLEVLKLFTDSVTEKAVIAERAFLHKMEGGCQV 243 Query: 247 AIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IAGFA + L +V A DG + ++ G D + +G +AA+ + K + Sbjct: 244 PIAGFASVGQDDNLTLTVLVGAPDGSVLYKERITGT--DPVKVGLEAAESLTAQGGKKII 301 Query: 306 N 306 + Sbjct: 302 D 302 >gi|122842|sp|P13446|HEM3_EUGGR RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase; Flags: Precursor gi|18412|emb|CAA33759.1| unnamed protein product [Euglena gracilis] Length = 480 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 105/275 (38%), Positives = 154/275 (56%), Gaps = 9/275 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K R+ TR SPLA+ A +S L + P + + P+ST+GD+I + L ++GGKGL Sbjct: 150 KTVRVATRKSPLAMWQAEFIQSELERLW--PGITVELQPMSTRGDKILDSPLAKVGGKGL 207 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120 F +E+E L+ D AVHS KD+P +L +GL + R D D + +SL+D Sbjct: 208 FVKELETALLENRSDIAVHSTKDVPMELPEGLVLGVICKRHDPCDAIVFPKGSNLKSLED 267 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+ LL R D+ ++ RG + TRL KL++ AI+LA AG+KRL Sbjct: 268 LPHGARVGTSSLRRQCQLLLKRPDLKFLELRGNVNTRLAKLDSGDYDAIILAAAGLKRLG 327 Query: 181 -KEKVIKEILNIED---FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 ++V+ NI D P+ GQGA+ IE N+P+ L++ ++H +V CERA Sbjct: 328 FSDRVLPGETNIIDPNVMCPAAGQGALSIELRTNDPEIAALLEPLHHIPDAVTVACERAM 387 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 L+G C+ I+GFA K L V + GK Sbjct: 388 NRRLNGGCQVPISGFAQLKDGQLRMEARVGSVTGK 422 >gi|150016167|ref|YP_001308421.1| porphobilinogen deaminase [Clostridium beijerinckii NCIMB 8052] gi|254800241|sp|A6LSY5|HEM3_CLOB8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|149902632|gb|ABR33465.1| porphobilinogen deaminase [Clostridium beijerinckii NCIMB 8052] Length = 291 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 107/291 (36%), Positives = 160/291 (54%), Gaps = 10/291 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LA SL D I ++I+ T+GDR + +L +IGGKGLF ++ Sbjct: 6 IATRKSKLAQTQTEIIMKSLKDKFNIDSEKMLIV---TEGDRKLDVSLAKIGGKGLFVKD 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE L+ D AVHS KD+P +L +I+A REDIRDV IS K+L ++I Sbjct: 63 IEIALLEKRADGAVHSMKDVPYELSHEFEIAAITEREDIRDVLISKDNIPFKELRKGAII 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSS+RR L R+D+ ++ RG ++TRL K+ I+LA AG+KRL +E +I E Sbjct: 123 GTSSIRRACQLKLMRNDLDIVPIRGNVQTRLEKMKEQNLDGIILASAGLKRLNEEDIITE 182 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + + F P+ QGA+ IE + A++ + + + +V ER+F+ L+G C S Sbjct: 183 YFDPKVFIPAVAQGALGIEC-LKTSSAKKYFEKMEDSNAKLTVEAERSFMRMLNGDCHSL 241 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN--GNRCDAINIGRDAAQYI 296 I ++ +G+ LY GI G+I V ++ G++ D I +GR A I Sbjct: 242 IGAYSEIQGNDLYMIGIYDIG-GRI---VKKDILGDKNDHIELGRKLANKI 288 >gi|325661929|ref|ZP_08150549.1| porphobilinogen deaminase [Lachnospiraceae bacterium 4_1_37FAA] gi|325471781|gb|EGC74999.1| porphobilinogen deaminase [Lachnospiraceae bacterium 4_1_37FAA] Length = 292 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 98/267 (36%), Positives = 148/267 (55%), Gaps = 7/267 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ R+G+R S LA+ + L +H P I ++ + T GD+I +R+L +IGGKG Sbjct: 2 KRKIRVGSRESKLAVVQSEMIIQELKKLH--PQLEIELVTMKTTGDKILDRSLDQIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+++ L+ GEID AVH KDMP + + L I AY RED RDV + A+ ++ Sbjct: 60 LFVKELDRALLDGEIDLAVHCLKDMPMETPEELPILAYSRREDPRDVLVP--AKGKENWN 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 VIG SS RR+ L + D V RG I+TRL KL++ + ++LA AG+KRL E Sbjct: 118 GQGVIGCSSFRRRIQLQKLYPDAEVRGIRGNIQTRLQKLDSGQYDVLVLAAAGLKRLGLE 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ + E+ P+ GQG + ++ + +ELVK + E+ ERAF+ LDG Sbjct: 178 ERIERYFSPEEILPAAGQGILVVQ---GREEMRELVKELQPEEMEVIAENERAFVRRLDG 234 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASD 269 C S +A + + L G+ D Sbjct: 235 GCSSPVAAYGRIQQDELVLTGLYYEED 261 >gi|295675858|ref|YP_003604382.1| porphobilinogen deaminase [Burkholderia sp. CCGE1002] gi|295435701|gb|ADG14871.1| porphobilinogen deaminase [Burkholderia sp. CCGE1002] Length = 332 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 104/265 (39%), Positives = 153/265 (57%), Gaps = 4/265 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 I +R S LA+ A R +L HK+ P ++ I+ ++T+GD+I +RTL+++GGKGLF + Sbjct: 15 IASRESRLAMWQAEHVRCAL---HKLYPSCDVKILGMTTRGDQILDRTLSKVGGKGLFVK 71 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 E+E L G D AVHS KD+P +L G +S + RED RD +S+ SL L +V Sbjct: 72 ELEAALADGRADLAVHSLKDVPMELPAGFALSTIMEREDPRDALVSNQYDSLAALPAGAV 131 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+ Sbjct: 132 VGTSSLRREAMLRMRYPHLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLADRIR 191 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 +L+ ED P+ GQGA+ IE + + ++H+ T +V ER L GSC+ Sbjct: 192 ALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHQHTAAAVEAERMVSRALGGSCEV 251 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGK 271 +A +A L+ GIV DG+ Sbjct: 252 PLAAYATWGDGALHLRGIVATPDGQ 276 >gi|329764682|ref|ZP_08256278.1| porphobilinogen deaminase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138828|gb|EGG43068.1| porphobilinogen deaminase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 308 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 102/290 (35%), Positives = 162/290 (55%), Gaps = 6/290 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 IG R S L+LA +T+ + ++ KI P + I + TKGD R L I KG+F + Sbjct: 2 IGARGSQLSLA---QTKLVISELKKITPDVDFEIKSIKTKGD-TDARPLFTIDQKGIFEK 57 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EI++ + GE+D AVHS KD+P++L++ L +++ RE + D+FIS +L + +V Sbjct: 58 EIDRAVADGEVDFAVHSLKDVPSQLVENLTLASIPKREMVNDIFISSDGTTLDSIKSGAV 117 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGTSSLRR + R RSD++V RG IETR+ K+ + I+LA AGI RL + V Sbjct: 118 IGTSSLRRAVQITRKRSDVTVRPIRGNIETRIKKVTDKIFDGIVLAQAGISRLGID-VQY 176 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+I+DF PSPGQGA+ I + + ++K I D+ + ER+ +D C+ Sbjct: 177 TPLSIQDFSPSPGQGALAIVSRKDESSTISMLKKIEDTDSRLEIEAERSLSDFVDSGCRF 236 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I +A G+ + + DGK V ++G++ D ++G+ + + Sbjct: 237 PIGAYAKSNGNQMTLSVSAFSVDGKKSLFVEKSGDKNDPFSLGKSVGEEL 286 >gi|119897284|ref|YP_932497.1| porphobilinogen deaminase [Azoarcus sp. BH72] gi|119669697|emb|CAL93610.1| hydroxymethylbilane synthase [Azoarcus sp. BH72] Length = 316 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 98/274 (35%), Positives = 148/274 (54%), Gaps = 2/274 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A ++ L ++ P + ++ ++T+GD+I +R L ++GGKGLF +E Sbjct: 17 IATRESRLALWQAEHVKARLEALY--PACTVELLGMTTRGDQILDRPLAKVGGKGLFVKE 74 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L+ G D AVHS KD+P ++ K + RE D F+S+ SL D+ +V+ Sbjct: 75 LETALLDGRADIAVHSMKDVPMEMGKAFALPCISAREVPLDAFVSNRYASLADMPPGTVV 134 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR++ L ++V RG ++TRL KL+ + AI+LA AG+ RL I+ Sbjct: 135 GTSSLRRESQLHAQYPFLAVTSLRGNLDTRLRKLDEGQYDAIILAAAGLTRLGLADRIRA 194 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 L E P+ GQGA+ IE + P+ + +N T V ERA L GSC+ Sbjct: 195 TLPAEVSLPAAGQGALGIECLSSRPEVAAWLAPLNDPATSACVRAERAVARALAGSCEVP 254 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281 + +A +G+ L+ G V DG R G+ Sbjct: 255 LGAYAELRGARLWLRGFVARPDGSEIVRAEREGD 288 >gi|168188066|ref|ZP_02622701.1| porphobilinogen deaminase [Clostridium botulinum C str. Eklund] gi|169294098|gb|EDS76231.1| porphobilinogen deaminase [Clostridium botulinum C str. Eklund] Length = 300 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 107/293 (36%), Positives = 159/293 (54%), Gaps = 6/293 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + + P + +STKGDRI + L +IG KGLF +E Sbjct: 5 VGSRGSKLALTQTNWIINEIKQNY--PQIQFEVKIISTKGDRIQHIALDKIGDKGLFVKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLALHSV 126 IE++LISGEID AVHS KDM T + + L+ S RED RDV I + S+ +L +++ Sbjct: 63 IEEQLISGEIDMAVHSMKDMSTDIPEELKFSYVPKREDYRDVLILNKKYNSIDELPMNAR 122 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVI 185 IGT S RR+ LL++R D++++ RG +ETR+NK+ H ++LA AGIKRL +EK+ Sbjct: 123 IGTGSKRRRYQLLQYRDDLNIVPIRGNVETRINKIETENLHGVVLAVAGIKRLNIEEKLD 182 Query: 186 KEI--LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I LN PSP QG + +E + ++++K I ++ ERAFL ++G Sbjct: 183 YNIFYLNENIMLPSPAQGILALEIKKHREDLEKILKSIEDRNSTIQAIAERAFLKGVNGG 242 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C I + G++ DG S G DA IG + A+ + Sbjct: 243 CHVPIGAICNINKDNIEVTGLLGKEDGSKIIRKSLGGKIEDAEKIGYELAEIV 295 >gi|51473654|ref|YP_067411.1| porphobilinogen deaminase [Rickettsia typhi str. Wilmington] gi|55976371|sp|Q68WR3|HEM3_RICTY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|51459966|gb|AAU03929.1| Porphobilinogen deaminase [Rickettsia typhi str. Wilmington] Length = 299 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 95/249 (38%), Positives = 146/249 (58%), Gaps = 5/249 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL +T + + + P N I+P+ T GD I N+ L +IGGK LF Sbjct: 5 IRIGTRNSTLAL---IQTNLVIAQIKQFFPDINCEIVPIITSGDLIQNKPLYDIGGKALF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE+ L+ +ID AVHS KD+P ++ L I+A L RED RDV + +S++ L + Sbjct: 62 LKEIEQALLDKKIDLAVHSLKDIPGRIPVDLVIAAVLEREDPRDVLVCLNYKSIETLPQN 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-EK 183 +VIG+S++RRKA + + R D+++ FRG +++R+ KL + A +L+YAG+KRL K Sbjct: 122 AVIGSSAVRRKAFIKKIRPDLNIKVFRGNVDSRIKKLMTGEVDATILSYAGLKRLNAFNK 181 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ P GQG I +E ++ + INH T++ + ERAFL LD + Sbjct: 182 KYCHLIEYSQILPCVGQGVIAVEIRKDDNAMFNICNQINHIPTFELIKPERAFLEHLDAN 241 Query: 244 CKSAIAGFA 252 C + I ++ Sbjct: 242 CSTPIGAYS 250 >gi|331085795|ref|ZP_08334878.1| porphobilinogen deaminase [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406718|gb|EGG86223.1| porphobilinogen deaminase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 292 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 98/267 (36%), Positives = 148/267 (55%), Gaps = 7/267 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ R+G+R S LA+ + L +H P I ++ + T GD+I +R+L +IGGKG Sbjct: 2 KRKIRVGSRESKLAVVQSEMIIQELKKLH--PQLEIELVTMKTTGDKILDRSLDQIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+++ L+ GEID AVH KDMP + + L I AY RED RDV + A+ ++ Sbjct: 60 LFVKELDRALLDGEIDLAVHCLKDMPMETPEELPILAYSRREDPRDVLVP--AKGKENWN 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 VIG SS RR+ L + D V RG I+TRL KL++ + ++LA AG+KRL E Sbjct: 118 GQGVIGCSSFRRRIQLQKLYPDAEVRGIRGNIQTRLQKLDSGQYDVLVLAAAGLKRLGLE 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ + E+ P+ GQG + ++ + +ELVK + E+ ERAF+ LDG Sbjct: 178 ERIERYFSPEEILPAAGQGILVVQ---GREEMRELVKKLQPEEMEVIAENERAFVRRLDG 234 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASD 269 C S +A + + L G+ D Sbjct: 235 GCSSPVAAYGRIEQDELVLTGLYYEED 261 >gi|322435837|ref|YP_004218049.1| porphobilinogen deaminase [Acidobacterium sp. MP5ACTX9] gi|321163564|gb|ADW69269.1| porphobilinogen deaminase [Acidobacterium sp. MP5ACTX9] Length = 318 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 100/307 (32%), Positives = 159/307 (51%), Gaps = 19/307 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE---IGGKG 62 RIG+R S LAL A + L H H + I + T GDR+ + GKG Sbjct: 4 IRIGSRGSQLALWQANHIAAELR-AHG---HQVEIEVIRTTGDRMQQPGFVPPPGLDGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F +EIE L+ G ID AVHS KD+PT + I+A PR D RD F+ +L L Sbjct: 60 IFIKEIEDALLDGRIDLAVHSYKDLPTTIDPRFTIAAVPPRADARDAFVCEPYWALHTLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 IGT+S RR+A LL R D++ ++ RG I+TRL KL A++LA AG+ R+ + Sbjct: 120 HAGRIGTTSPRRRAQLLALRPDLTFVELRGNIDTRLRKLEEGACDALVLACAGLDRIART 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETH-----------VNNPKAQELVKVINHEDTWDSVN 231 + + + ++++ P+PGQGA+ +ET +P + ++ + H +T + + Sbjct: 180 ESVHQRFDVDELTPAPGQGALALETRSPAHALDTEDPTRDPAIYKAIRALEHPETRFATD 239 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-AINIGR 290 ERAFLAE+ G C+ + Y VL+ DG+ + + + + + A +G+ Sbjct: 240 AERAFLAEMGGGCELPLGAHCLSTSGVYRLYAQVLSPDGEYMVQTTLDRHPEEPAAALGQ 299 Query: 291 DAAQYIR 297 AA+ ++ Sbjct: 300 RAAEILK 306 >gi|168703144|ref|ZP_02735421.1| porphobilinogen deaminase [Gemmata obscuriglobus UQM 2246] Length = 299 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 99/267 (37%), Positives = 145/267 (54%), Gaps = 2/267 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P ++GTR SPLAL A L V + P + ++ + T GDR L+ +GG G+F Sbjct: 4 PLKLGTRGSPLALWQANYIAELLRPV--VAPRPVELVLIETHGDRDQASALSAMGGFGVF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+ I+ L+ G D AVHS KD+PT L+++A PR D F+S + DL Sbjct: 62 TKAIQNALLDGRADVAVHSLKDLPTIPEPRLELAAVPPRGPTGDAFVSRKHKRFDDLHPG 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A +L R D+ ++D RG ++TRL KL++ AI+LA AG+ RL Sbjct: 122 ATVGTSSLRRRAQVLNRRPDLKLLDLRGNVDTRLRKLDDLGLDAIVLAEAGLARLGLADR 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I EIL+ P+ GQGAI +E ++ + + ++ + E T+ V ERA L L G C Sbjct: 182 ITEILDPSWMLPAVGQGAIGLECRSDDGETKLVLAQVRCESTFARVQAERAMLYALGGGC 241 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGK 271 I + L G VL+ DG+ Sbjct: 242 LVPIGATSKVLDGVLTVRGAVLSPDGR 268 >gi|87306341|ref|ZP_01088488.1| porphobilinogen deaminase [Blastopirellula marina DSM 3645] gi|87290520|gb|EAQ82407.1| porphobilinogen deaminase [Blastopirellula marina DSM 3645] Length = 308 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 107/304 (35%), Positives = 160/304 (52%), Gaps = 7/304 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A L V ++ II ++T+GD +T L IGG+G+FT Sbjct: 4 IRIGTRGSQLAQWQANWVADQLRAVGT----DVEIIHIATQGD-VTQGPLDLIGGRGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EI+ L+ ID AVHS KD+PT+ + GL+++A R DV I+ A + L S Sbjct: 59 TEIQAALLDNRIDVAVHSLKDLPTEAVVGLRLAAVPARGADGDVLITSKASDVLGLPQES 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +IGT S+RRKA LL R D + D RG ++TRL KL++ AI+LA AG++RL+ + I Sbjct: 119 IIGTGSMRRKAQLLHLRRDFQIRDIRGNLDTRLRKLDDGLYDAIILAEAGLRRLELIERI 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ P+ GQGA+ +E + ++ +NHED+ SV ER+ L L G C Sbjct: 179 RHVIPKAQMLPAVGQGALGLEIRERDSATAAMLAPLNHEDSHYSVLAERSMLRNLRGGCL 238 Query: 246 SAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 + + + L+ G+V++ DG S G A +IGR A + + Sbjct: 239 APVGAWGRIDPIKQLLFLDGVVVSGDGHHKVTASACGPPNRAEDIGRQVADQLAIQGAER 298 Query: 304 VFNF 307 + F Sbjct: 299 LIAF 302 >gi|226354974|ref|YP_002784714.1| porphobilinogen deaminase [Deinococcus deserti VCD115] gi|259647793|sp|C1CYD9|HEM3_DEIDV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226316964|gb|ACO44960.1| putative Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Deinococcus deserti VCD115] Length = 311 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 110/293 (37%), Positives = 155/293 (52%), Gaps = 11/293 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR----TLTEIGGKGL 63 +GTR S LALA + L + + P + I +STKGDR NR + + G KG Sbjct: 6 VGTRGSTLALAQTRWVVARLKE--EWPDTDFRIQTISTKGDR--NRESLEAMAQKGDKGF 61 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122 + +EIE L+ ID AVHS KD+PT+ +GL++++ R D RDV I + L DL Sbjct: 62 WVKEIEDALLQKRIDIAVHSLKDLPTEQPEGLEVASIPKRVDARDVLIGKEGMKRLADLP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSS+RRKA L +R D+ VID RG I+TRL L ++ AI+LA AG+ R + Sbjct: 122 QGARVGTSSVRRKAFLRAYRPDLQVIDLRGNIDTRLAALAGDEYDAIILAAAGLIRTEMR 181 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVN--NPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E + + P+PGQGA+ +ET N E+ I+ T D + ER FLA L Sbjct: 182 HRIDEFVEPDILLPAPGQGALALETRSGPENDLTIEVAYAIHDHGTDDRITAEREFLAGL 241 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 C + + A KG L G V A DG + G+ + +IG + A Sbjct: 242 GAGCMAPVGAHASIKGGVLTLEGWVGALDGSKVIRATSIGDPAECADIGAELA 294 >gi|124268186|ref|YP_001022190.1| hydroxymethylbilane synthase [Methylibium petroleiphilum PM1] gi|124260961|gb|ABM95955.1| hydroxymethylbilane synthase [Methylibium petroleiphilum PM1] Length = 317 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 96/256 (37%), Positives = 148/256 (57%), Gaps = 7/256 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + + I TR S LAL A R+ L+ + P + ++ ++T+GD+I +RTL+++GGKGL Sbjct: 6 QAWVIATRESRLALWQAEHVRA-LLGSRLVEP--VELLGMTTRGDQILDRTLSKVGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L +G+ AVHS KD+P L G ++A L RED RD ++S L L Sbjct: 63 FVKELETALEAGDAHLAVHSLKDVPMDLPAGFVLAAVLEREDPRDAWVSPRYADLAALPA 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR + L R D+ + RG ++TRL KL+ + AI+LA AG+KRL + Sbjct: 123 GAVVGTSSLRRLSQLRARRPDLRIEPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGLAE 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQ----ELVKVINHEDTWDSVNCERAFLAE 239 I+ + + P+ GQGA+ IE + P+ ++ + HE +W +V+ ERA Sbjct: 183 RIRSVFEADAMIPAAGQGALGIELRADAPERHPALWAALRALTHEPSWLAVHAERAVSRA 242 Query: 240 LDGSCKSAIAGFAYCK 255 L GSC +A A + Sbjct: 243 LGGSCSMPLAAHAQWQ 258 >gi|262199948|ref|YP_003271157.1| porphobilinogen deaminase [Haliangium ochraceum DSM 14365] gi|262083295|gb|ACY19264.1| porphobilinogen deaminase [Haliangium ochraceum DSM 14365] Length = 320 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 109/317 (34%), Positives = 166/317 (52%), Gaps = 13/317 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ I TR S LAL A R + V P + ++ + T+GD+I + L++IGG Sbjct: 1 MSERTIHISTRGSQLALWQAHHVRDEIRRVR--PAWQVELVIIKTQGDKILDVPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K LF +EIE+ L+ G D AVHS KD+P +L GL ++A RED D + + L + Sbjct: 59 KALFVKEIEQALLDGRADVAVHSMKDVPAELAPGLFMAATSRREDPYDALCTRDGRGLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LA + +GTSSLRR+ +L R D+ + RG + TRL KL++ A++LA AG+KRL Sbjct: 119 LAEGATLGTSSLRRQCQILARRPDLRIEMLRGNVPTRLGKLDDGSFDAVILAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNN-PKAQELVKVIN---HEDTWD-SVNCERA 235 + I + L+ P+ GQG + IET + P +ELV+ + H+ + V ERA Sbjct: 179 HGERISQRLDGGVCVPAVGQGVLGIETRQGDAPADRELVEALREALHDPAEERRVVAERA 238 Query: 236 FLAELDGSCKSAIAGFAYCKG------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +A L GSC++ +A A +G TL G+ DG G DA +G Sbjct: 239 MMAALGGSCQTPLAAHASYRGDSDPVAGTLVIEGLCGRPDGSEILRAQVEGRAEDAQALG 298 Query: 290 RDAAQYIRFISNKNVFN 306 A+ +R + + + Sbjct: 299 SSLAEELRGQGAQAIID 315 >gi|15807343|ref|NP_296073.1| porphobilinogen deaminase [Deinococcus radiodurans R1] gi|11386849|sp|Q9RRY0|HEM3_DEIRA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|6460165|gb|AAF11898.1|AE002066_2 porphobilinogen deaminase [Deinococcus radiodurans R1] Length = 309 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 109/291 (37%), Positives = 157/291 (53%), Gaps = 9/291 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR----TLTEIGGKGL 63 +GTR S LALA + L + + P + I +STKGDR NR L + G KG Sbjct: 6 VGTRGSTLALAQTRWVVARLKE--EWPETDFRIQTISTKGDR--NRESLEQLAQKGDKGF 61 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122 + +EIE+ L++ +ID AVHS KD+PT+ +GL+IS+ R D RD I + L +L Sbjct: 62 WVKEIEEALLAKKIDIAVHSLKDLPTEQPEGLEISSIPKRVDGRDALIGREGMKKLAELP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IGTSS+RRKA L +R D+ V D RG I+TRL L + + AI+LA AG+ R ++ Sbjct: 122 EGARIGTSSVRRKAFLRAYRPDLIVKDLRGNIDTRLAALGSGEYDAIILAAAGLIRTEQR 181 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E ++ + P+PGQGA+ +ET + E+ I+ T D + ER FLA L Sbjct: 182 HRIDEFVDPDILLPAPGQGALALETRTEDDLTIEVAYAIHDHATDDRITAEREFLAGLGA 241 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 C + + A K L G V A DG + G+ + +IG + A Sbjct: 242 GCMAPVGAHAVIKNGLLTLEGWVGALDGTQVIRATSQGDVAECADIGAELA 292 >gi|256828337|ref|YP_003157065.1| porphobilinogen deaminase [Desulfomicrobium baculatum DSM 4028] gi|256577513|gb|ACU88649.1| porphobilinogen deaminase [Desulfomicrobium baculatum DSM 4028] Length = 311 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 97/260 (37%), Positives = 145/260 (55%), Gaps = 2/260 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LAL A L + P + + + TKGD+I + L +IGGKGLF Sbjct: 4 IRIATRGSKLALWQAHHISGLLR--AQYPGMTVELNIIKTKGDKILDVPLAKIGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L++ E D AVHS KD+P +L +GL++ RE D F+S + L + Sbjct: 62 KEIEEALLADEADIAVHSMKDVPAQLPEGLKLGIIPEREQPTDSFLSVNYPDIASLPAGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+ L+ R D+ ++ RG ++TR+ KL + AI++A AG+ RL+ Sbjct: 122 RVGTSSLRRQTQLMGLRRDLCILSLRGNLDTRVGKLMAGEFDAIIVATAGMNRLELSAPH 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L F P+ QGA+ IE + P+ EL+ ++H + V ER+FL LDG C+ Sbjct: 182 MQELAPPMFYPAVAQGALGIEYRADRPQLDELLAFLDHAPSKICVEAERSFLFGLDGGCQ 241 Query: 246 SAIAGFAYCKGSTLYFYGIV 265 IAG+A G+ + G+V Sbjct: 242 VPIAGYATLSGTEITLTGLV 261 >gi|22299189|ref|NP_682436.1| porphobilinogen deaminase [Thermosynechococcus elongatus BP-1] gi|39931549|sp|Q8DIE4|HEM3_THEEB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|22295371|dbj|BAC09198.1| porphobilinogen deaminase [Thermosynechococcus elongatus BP-1] Length = 320 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 105/297 (35%), Positives = 157/297 (52%), Gaps = 5/297 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P RIG+R S LAL ++ L H+ ++ ++T+GD I + L +IG KGL Sbjct: 7 RPVRIGSRKSQLALVQTEWVQAQLQTHHR--DRAFEVVTMTTQGDNILDVALAKIGDKGL 64 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120 FT+E+E ++ GE D AVHS KD+PT+L GL ++A RED D + T ++ Sbjct: 65 FTKELELSMLRGETDLAVHSLKDLPTQLPDGLVLAAITEREDPADALVLGAKWTGHTIDT 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSSLRR A L + ++ D RG + TRL KL+ + A++LA AG++RL Sbjct: 125 LPEGTVIGTSSLRRLAQLRHYYPHLTFKDVRGNLNTRLAKLDAGEYDALILAVAGLRRLG 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I ++L + GQGA+ IE + LVK + H +T ERAFL +L Sbjct: 185 FGDRISQVLPATVSLYAVGQGALGIECRAEDADILALVKTLEHPETTARCLAERAFLRQL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +G C+ I + L G+V + DG+ + S G+ A +G A +R Sbjct: 245 EGGCQVPIGVHTVIENGQLTLTGLVASLDGQRLVKDSLTGDVATAEELGTRLALKLR 301 >gi|78777061|ref|YP_393376.1| hydroxymethylbilane synthase [Sulfurimonas denitrificans DSM 1251] gi|123727562|sp|Q30S90|HEM3_SULDN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78497601|gb|ABB44141.1| hydroxymethylbilane synthase [Sulfurimonas denitrificans DSM 1251] Length = 313 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 104/297 (35%), Positives = 169/297 (56%), Gaps = 7/297 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL + ++ L + + P + + + T GDRI ++ L++IGGKGL Sbjct: 2 KKLVIATRGSQLALWQSNHIKAILQEQN--PGLEVELNVIVTTGDRIQDKALSKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ ++ GE AVHS KD+PT + GL ++A RED RD +S ++ L Sbjct: 60 FLKELEEAMLQGEAQIAVHSLKDVPTVMPDGLILAAITEREDSRDALLSEKYANIDALPK 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++V+GTSSLRR+ + + R D+ + D RG ++TR+ KL + AI+LA AGI RL Sbjct: 120 NAVVGTSSLRRRMQIQKLRPDLIIKDLRGNVDTRIRKLKEGEFDAIILAAAGINRLSLLD 179 Query: 184 VIKEI--LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +K + +++E+ PS GQGA+ IE VN+ + +V + E + ER+F+ EL+ Sbjct: 180 AVKHVYPISLEEMVPSMGQGALGIEA-VNDAEVLRIVAGLEDEYSRIETTIERSFVDELE 238 Query: 242 GSCKSAIA-GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD-AAQYI 296 G C+ I + T+ ++ +G+ S+ ++ D NIGR+ AA++I Sbjct: 239 GGCQVPIGVNASVLDDGTISIRAVLGLPNGEEMLSDSKITSKKDYENIGREIAAEFI 295 >gi|51244454|ref|YP_064338.1| porphobilinogen deaminase [Desulfotalea psychrophila LSv54] gi|50875491|emb|CAG35331.1| probable porphobilinogen deaminase [Desulfotalea psychrophila LSv54] Length = 313 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 100/297 (33%), Positives = 159/297 (53%), Gaps = 7/297 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K IG+R S LA+ L + I + TKGD+I +R++ +IG KG Sbjct: 2 KNIINIGSRKSKLAMWQTNTIAGQL----EAAGMETRINSMETKGDKILDRSIVKIGSKG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKDL 121 +FTEE+E +L +G D AVHSAKDM ++L + ++ A+ RE + DV +S + L D Sbjct: 58 VFTEELEVQLATGITDIAVHSAKDMQSQLPEDFELIAFSQREKVNDVLVSDDKEIDLADP 117 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 IGTSS+RR+A+L ++ + ++ RG ++TR+ K+ N A++LAYAG+KR++ Sbjct: 118 TKKIRIGTSSVRRRAMLKQYYPHVQAVEMRGNLQTRIEKMRNGDCDALMLAYAGVKRMEN 177 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKV-INHEDTWDSVNCERAFLAE 239 + +I + F P GQG I IE N +P +E ++ +N D+ + ERA+L + Sbjct: 178 DDMIVMEFDTARFTPPVGQGCIAIEAATNLDPARREAIRTALNDADSESCLLAERAYLKK 237 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L+G C G A +G L + + DG NR +A +G + +YI Sbjct: 238 LEGGCSIPAFGLACLEGEELVMRAGLSSLDGTRILVKEVRANRSEAETLGNNLGEYI 294 >gi|167580196|ref|ZP_02373070.1| porphobilinogen deaminase [Burkholderia thailandensis TXDOH] Length = 286 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 102/263 (38%), Positives = 153/263 (58%), Gaps = 2/263 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P +L G ++A + RED RD F+S+ SL L +V+ Sbjct: 74 LESALADGRADLAVHSLKDVPMELPAGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+ Sbjct: 134 GTSSLRREAMLRARYPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L++ED P+ GQGA+ IE + ++ T +V ERA L G+C+ Sbjct: 194 LLDVEDSLPAAGQGALGIEIAAGRADVAAWLAPLHDHPTALAVEAERAVSRALGGNCEVP 253 Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270 +A A +G L+ G V +DG Sbjct: 254 LAAHAVWRGDELHLTGSVSTTDG 276 >gi|253995539|ref|YP_003047603.1| porphobilinogen deaminase [Methylotenera mobilis JLW8] gi|253982218|gb|ACT47076.1| porphobilinogen deaminase [Methylotenera mobilis JLW8] Length = 313 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 104/293 (35%), Positives = 161/293 (54%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LA+ A +S L ++ P + I+ ++T GD+I + L ++GGKGL Sbjct: 11 KKLVIASRESALAMWQARHIQSRLQALY--PETEVTILGMTTTGDQILDTPLAKVGGKGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L G D AVHS KD+P L +G ++A RED RD F+S+ +L+DL Sbjct: 69 FVKELEIALADGRADLAVHSMKDVPMNLPEGFILAATGEREDPRDAFVSNDYATLEDLPA 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +S++GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+ RL+ Sbjct: 129 NSIVGTSSLRRQSQLQARFPHLKIESLRGNLQTRLRKLDEGQYAAIILAAAGLIRLELGN 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I++ + E P+ GQGA+ IE + P + +NH DT V ER L GS Sbjct: 189 RIRQFIAPEHSIPAVGQGALGIEISADRPDLIATLAPLNHPDTQVCVEAERGMSRSLAGS 248 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C + +A C+ ++ G V + DGK + G+R +A +G+ A + Sbjct: 249 CTVPLGAYAVCEADSIRITGFVASVDGKQMLIETAVGSRANAEALGKTLASQL 301 >gi|118474504|ref|YP_891866.1| porphobilinogen deaminase [Campylobacter fetus subsp. fetus 82-40] gi|158512506|sp|A0RNT3|HEM3_CAMFF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|118413730|gb|ABK82150.1| porphobilinogen deaminase [Campylobacter fetus subsp. fetus 82-40] Length = 303 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 99/265 (37%), Positives = 149/265 (56%), Gaps = 6/265 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +I +R S LAL R L+ H++ II + TKGD I + L +IGGKGLFT Sbjct: 3 IKIASRNSALALWQTHHIRDLLI----AQGHSVEIITMKTKGDVILDTPLAKIGGKGLFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ G D AVHS KD+PT GL+++ RED+RD +S ++L +L + Sbjct: 59 KELENSMLEGSADIAVHSLKDVPTTFPDGLKLACVCSREDVRDAMLSMKYKNLDELPQGA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT+SLRRK +L R+D+ +I RG + +R+ KL N + AI+LA AGI RL K + Sbjct: 119 KVGTTSLRRKMQILAHRADLDIISLRGNVNSRIAKLKNGEFDAIILAMAGINRLNLSKEV 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 K I D P+ GQGA+ IE ++ + + ++ +N E + ER F+ L+G C+ Sbjct: 179 KFTSAI-DTIPAMGQGALGIEA-IDKKEILDAIEFLNDEKSVVETTIERDFVHTLNGGCQ 236 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270 + I A KG + I+ DG Sbjct: 237 APIGINAKLKGDKIEVEAILGLVDG 261 >gi|121605981|ref|YP_983310.1| porphobilinogen deaminase [Polaromonas naphthalenivorans CJ2] gi|120594950|gb|ABM38389.1| porphobilinogen deaminase [Polaromonas naphthalenivorans CJ2] Length = 331 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 93/244 (38%), Positives = 137/244 (56%), Gaps = 3/244 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LA+ A ++ L + ++ ++T GD+I +R+L+++GGKGLF +E Sbjct: 16 IATRESRLAMWQAEHVKALLESRLG---WQVELLGMTTLGDQILDRSLSKVGGKGLFVKE 72 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L +G ++ L RED D F+S+ SL +L +V+ Sbjct: 73 LEVALSEGRADLAVHSLKDVPMDLPEGFALACVLEREDPHDAFVSNDFASLAELPPGAVV 132 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR LL R D+++ RG ++TRL KL+ + AI+LA AG+KRL E I+ Sbjct: 133 GTSSLRRLVLLKALRPDLAIQPLRGNLDTRLRKLDEGQYQAIVLAAAGLKRLGLESRIRH 192 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 D P+ GQGA+ IE + + + H+ TW +V ER + GSC Sbjct: 193 TFAPTDMLPAAGQGALGIEVRADRADLIAALATLAHQPTWLAVTAERTVSRAMGGSCSMP 252 Query: 248 IAGF 251 +A F Sbjct: 253 LAAF 256 >gi|300856363|ref|YP_003781347.1| porphobilinogen deaminase [Clostridium ljungdahlii DSM 13528] gi|300436478|gb|ADK16245.1| porphobilinogen deaminase [Clostridium ljungdahlii DSM 13528] Length = 290 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 103/291 (35%), Positives = 154/291 (52%), Gaps = 6/291 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F+I TR S LA L + ++I T GD+ + L +IGGKGLF Sbjct: 3 FKIATRKSKLAQTQTEIVMDILQKDYNAKCEKVLI---ETMGDKRLDIALNKIGGKGLFL 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L+ E D AVHS KD+P + + +I+A + RED+RD F+S +L + Sbjct: 60 KEIELALLKDEADAAVHSMKDVPFDVPEDFEIAAIMQREDVRDAFVSKDKVPFDELPKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR L R DI + RG I+TR++K+ + I+LA AGIKR E+++ Sbjct: 120 KIGTSSNRRAEQLKILRPDIEIAPIRGNIQTRISKIESQNLDGIVLAAAGIKRSHLEELV 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E +ED P+ GQGA+ IET + K + ++ E+T V ER+F+ L+G C Sbjct: 180 TEYFKVEDMVPAIGQGALGIETK-KDSKNKSFFSKLDDENTRICVEAERSFMRTLNGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 S I +A T+ G+ + + I +V+ GN+ D + +G A+ I Sbjct: 239 STIGAYAKIDKDTINIMGMFMVGNKLIKKDVT--GNKEDYMVLGEKLAKMI 287 >gi|163814461|ref|ZP_02205850.1| hypothetical protein COPEUT_00612 [Coprococcus eutactus ATCC 27759] gi|158450096|gb|EDP27091.1| hypothetical protein COPEUT_00612 [Coprococcus eutactus ATCC 27759] Length = 350 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 99/271 (36%), Positives = 152/271 (56%), Gaps = 20/271 (7%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +KK ++GTR S LALA +L + + P + ++ +ST+GDR T+R L E GGK Sbjct: 38 QKKTVKVGTRGSKLALAQTELVIKALNE--RFPQIDFQMVTMSTRGDRDTSRALLEFGGK 95 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 +F EE E+ ++ G+ID AVHSAKDMP ++++GL IS LPR +DVFI + +S D Sbjct: 96 AVFVEEFEEAILKGDIDIAVHSAKDMPMEIMEGLTISGTLPRACPQDVFIYKSGRSF-DR 154 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL-- 179 V+GTSSLRR+ + + + RG + TR+ KL + + AI+LA AG++RL Sbjct: 155 NDSFVVGTSSLRRQYQIRDMYPNAVCKNLRGNVGTRIQKLEDGEYDAIILAAAGLERLGV 214 Query: 180 --------------KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED 225 K+++ L+ E P+ QG I IET + +A ++V+ IN + Sbjct: 215 IEDKGNDSTECFEVHKDELTFRYLSTESMLPAACQGIIAIETRTSG-EAYDMVRAINDTE 273 Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + + CERA L+ L+ C I ++ KG Sbjct: 274 AYTQLTCERAVLSRLNAGCHEPIGVYSELKG 304 >gi|53718657|ref|YP_107643.1| porphobilinogen deaminase [Burkholderia pseudomallei K96243] gi|53725180|ref|YP_102499.1| porphobilinogen deaminase [Burkholderia mallei ATCC 23344] gi|76808885|ref|YP_332640.1| porphobilinogen deaminase [Burkholderia pseudomallei 1710b] gi|121600693|ref|YP_993593.1| porphobilinogen deaminase [Burkholderia mallei SAVP1] gi|124386445|ref|YP_001028944.1| porphobilinogen deaminase [Burkholderia mallei NCTC 10229] gi|126449020|ref|YP_001081141.1| porphobilinogen deaminase [Burkholderia mallei NCTC 10247] gi|126455102|ref|YP_001065357.1| porphobilinogen deaminase [Burkholderia pseudomallei 1106a] gi|167003503|ref|ZP_02269289.1| hydroxymethylbilane synthase [Burkholderia mallei PRL-20] gi|167901767|ref|ZP_02488972.1| porphobilinogen deaminase [Burkholderia pseudomallei NCTC 13177] gi|217419743|ref|ZP_03451249.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 576] gi|226194325|ref|ZP_03789923.1| hydroxymethylbilane synthase [Burkholderia pseudomallei Pakistan 9] gi|237811340|ref|YP_002895791.1| hydroxymethylbilane synthase [Burkholderia pseudomallei MSHR346] gi|242316542|ref|ZP_04815558.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 1106b] gi|254178350|ref|ZP_04885005.1| porphobilinogen deaminase [Burkholderia mallei ATCC 10399] gi|254190785|ref|ZP_04897292.1| porphobilinogen deaminase [Burkholderia pseudomallei Pasteur 52237] gi|254199404|ref|ZP_04905770.1| porphobilinogen deaminase [Burkholderia mallei FMH] gi|254205719|ref|ZP_04912071.1| porphobilinogen deaminase [Burkholderia mallei JHU] gi|254260166|ref|ZP_04951220.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 1710a] gi|254298288|ref|ZP_04965740.1| porphobilinogen deaminase [Burkholderia pseudomallei 406e] gi|254357877|ref|ZP_04974150.1| porphobilinogen deaminase [Burkholderia mallei 2002721280] gi|61213345|sp|Q62LC0|HEM3_BURMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|61213357|sp|Q63W73|HEM3_BURPS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123599913|sp|Q3JUW3|HEM3_BURP1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|158513523|sp|A3NSN6|HEM3_BURP0 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166201495|sp|A3MLK5|HEM3_BURM7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166201496|sp|A2SAH5|HEM3_BURM9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166201497|sp|A1V5U0|HEM3_BURMS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|52209071|emb|CAH35011.1| putative porphobilinogen deaminase protein [Burkholderia pseudomallei K96243] gi|52428603|gb|AAU49196.1| porphobilinogen deaminase [Burkholderia mallei ATCC 23344] gi|76578338|gb|ABA47813.1| porphobilinogen deaminase [Burkholderia pseudomallei 1710b] gi|121229503|gb|ABM52021.1| porphobilinogen deaminase [Burkholderia mallei SAVP1] gi|124294465|gb|ABN03734.1| hydroxymethylbilane synthase [Burkholderia mallei NCTC 10229] gi|126228744|gb|ABN92284.1| porphobilinogen deaminase [Burkholderia pseudomallei 1106a] gi|126241890|gb|ABO04983.1| hydroxymethylbilane synthase [Burkholderia mallei NCTC 10247] gi|147749000|gb|EDK56074.1| porphobilinogen deaminase [Burkholderia mallei FMH] gi|147753162|gb|EDK60227.1| porphobilinogen deaminase [Burkholderia mallei JHU] gi|148027004|gb|EDK85025.1| porphobilinogen deaminase [Burkholderia mallei 2002721280] gi|157808153|gb|EDO85323.1| porphobilinogen deaminase [Burkholderia pseudomallei 406e] gi|157938460|gb|EDO94130.1| porphobilinogen deaminase [Burkholderia pseudomallei Pasteur 52237] gi|160699389|gb|EDP89359.1| porphobilinogen deaminase [Burkholderia mallei ATCC 10399] gi|217397047|gb|EEC37063.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 576] gi|225933410|gb|EEH29399.1| hydroxymethylbilane synthase [Burkholderia pseudomallei Pakistan 9] gi|237505195|gb|ACQ97513.1| hydroxymethylbilane synthase [Burkholderia pseudomallei MSHR346] gi|242139781|gb|EES26183.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 1106b] gi|243060977|gb|EES43163.1| hydroxymethylbilane synthase [Burkholderia mallei PRL-20] gi|254218855|gb|EET08239.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 1710a] Length = 329 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 101/263 (38%), Positives = 153/263 (58%), Gaps = 2/263 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+ Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+ Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC+ Sbjct: 194 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVP 253 Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270 +A A +G L+ G V +DG Sbjct: 254 LAAHAVWRGGELHLTGSVSTTDG 276 >gi|254196423|ref|ZP_04902847.1| porphobilinogen deaminase [Burkholderia pseudomallei S13] gi|169653166|gb|EDS85859.1| porphobilinogen deaminase [Burkholderia pseudomallei S13] Length = 329 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 101/263 (38%), Positives = 153/263 (58%), Gaps = 2/263 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+ Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+ Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC+ Sbjct: 194 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVP 253 Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270 +A A +G L+ G V +DG Sbjct: 254 LAAHAVWRGGELHLTGSVSTTDG 276 >gi|52842939|ref|YP_096738.1| porphobilinogen deaminase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52630050|gb|AAU28791.1| porphobilinogen deaminase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 321 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 107/288 (37%), Positives = 156/288 (54%), Gaps = 7/288 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A R L V + P +I ++P+ T GDR L GG Sbjct: 13 MSAKIIRIATRQSPLALWQANHVREML--VKQWPNLSIELLPMITSGDRFLKDKLLSAGG 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL Sbjct: 71 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLLLTAICKRDNPFDALISPQFKSLAA 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++IGTSSLRR++ LL + ++ + RG I TRL+KL + + AI+LA AG++R+ Sbjct: 131 LPKNAIIGTSSLRRQSQLLAYNPNLQIKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ + P+ QGA+CIE ++ + QELV +N + V+ ER A+L Sbjct: 191 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELVHGLNDPISALCVHTERRVNAKL 250 Query: 241 DGSCKSAIAGFAYC---KGSTLYFYGIVLASDGKIFHEVSRNGNRCDA 285 G+C A YC + L VL DG + + G +A Sbjct: 251 GGNCHIPFA--VYCTITEEKLLLLRAKVLNMDGSQMIDDEQQGKIAEA 296 >gi|118594154|ref|ZP_01551501.1| porphobilinogen deaminase [Methylophilales bacterium HTCC2181] gi|118439932|gb|EAV46559.1| porphobilinogen deaminase [Methylophilales bacterium HTCC2181] Length = 305 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 101/293 (34%), Positives = 158/293 (53%), Gaps = 2/293 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R SPLA+ A ++ L +++ P +I I T+GD I +++L IGGKGL Sbjct: 3 KKITIASRESPLAMWQAEHIKTQLNNLY--PYLSIYIKGFKTQGDIILDQSLATIGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ L+ E D AVHS KD+P + + Q+SA RED RD FIS +SL D+ Sbjct: 61 FIKELEQALLKKEADLAVHSMKDLPMDIYEDFQLSAITAREDPRDAFISLKYKSLDDMPD 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR++ + + + RG ++TRL+KL + AI+LA AG+ RL + Sbjct: 121 GAIVGTSSLRRQSQIKAKYPSLIIEPLRGNLQTRLSKLKKGQYGAIILAAAGLIRLDLQD 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I ++ P+ GQGA+ IE +N + L+K +N +DT V ER L GS Sbjct: 181 QITMYIDKNVSIPAVGQGALGIEILSSNTELDLLLKPLNDDDTSRCVLAERMVSRSLAGS 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C + A+ + + G V + +G+ G + D +G +Q + Sbjct: 241 CTVPLGAHAFINKNAMVINGFVASPNGEKIIHAEMKGVKADFYKLGESLSQLL 293 >gi|61213316|sp|Q5ZRY6|HEM3_LEGPH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 309 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 107/288 (37%), Positives = 156/288 (54%), Gaps = 7/288 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A R L V + P +I ++P+ T GDR L GG Sbjct: 1 MSAKIIRIATRQSPLALWQANHVREML--VKQWPNLSIELLPMITSGDRFLKDKLLSAGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL Sbjct: 59 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLLLTAICKRDNPFDALISPQFKSLAA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++IGTSSLRR++ LL + ++ + RG I TRL+KL + + AI+LA AG++R+ Sbjct: 119 LPKNAIIGTSSLRRQSQLLAYNPNLQIKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ + P+ QGA+CIE ++ + QELV +N + V+ ER A+L Sbjct: 179 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELVHGLNDPISALCVHTERRVNAKL 238 Query: 241 DGSCKSAIAGFAYC---KGSTLYFYGIVLASDGKIFHEVSRNGNRCDA 285 G+C A YC + L VL DG + + G +A Sbjct: 239 GGNCHIPFA--VYCTITEEKLLLLRAKVLNMDGSQMIDDEQQGKIAEA 284 >gi|254498735|ref|ZP_05111451.1| porphobilinogen deaminase HemC [Legionella drancourtii LLAP12] gi|254352063|gb|EET10882.1| porphobilinogen deaminase HemC [Legionella drancourtii LLAP12] Length = 309 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 102/297 (34%), Positives = 156/297 (52%), Gaps = 3/297 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A R L+ + P + ++P++T GD+ L +GG Sbjct: 1 MNSRIIHIATRQSPLALWQANHVRGLLLK--QWPMLQVELLPMTTSGDKFLKDKLLAVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ D AVHSAKDMP + GL ++A R++ DV +S L D Sbjct: 59 KGLFVKELEEALLDNRADIAVHSAKDMPAEFPAGLGLAAICKRDNPFDVLVSKHYAKLVD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR++ LL +R D+ + RG I TRL KL + + AI+LA AG++R+ Sbjct: 119 LPQQAIVGTGSLRRQSQLLAYRPDLCIKPLRGNINTRLAKLESGEYQAIILAAAGLERMG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E L+ + P+ QGA+ IE + + EL+ +N + V+ ER A L Sbjct: 179 FNHAISEQLSEQIMLPACAQGALAIECRTEDQEIHELLAGLNDPLSAVCVHTERQVNALL 238 Query: 241 DGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 G+C +A F A + L+ +L DG + + G A + + AQ + Sbjct: 239 GGNCHVPLAVFCAPTTSNQLFLQAKILNQDGSKIIQNQQTGALDKATVLAYNCAQSL 295 >gi|78357663|ref|YP_389112.1| porphobilinogen deaminase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123741224|sp|Q30Y29|HEM3_DESDG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78220068|gb|ABB39417.1| hydroxymethylbilane synthase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 316 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 103/295 (34%), Positives = 154/295 (52%), Gaps = 2/295 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL A + +M + + ++ L TKGD I + L ++GGKGL Sbjct: 2 KKIVIATRGSKLALWQAEHIKERIMQQYP-DSFEVELLVLKTKGDIILDVPLAKVGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+ G D AVHS KD+P +L +GL + A RE D +S L L Sbjct: 61 FVKEIEEALLDGRADIAVHSMKDVPMELPQGLTLGAIPEREVPTDSLLSARYDGLDALPQ 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR++ +L R D+ V RG ++TR+ KL + + AI++A +G+KRL + Sbjct: 121 GAVVGTSSLRRQSQILAMRPDLEVKWLRGNVQTRIRKLMDGEYDAIIMATSGLKRLGETA 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 L F P+ GQGA+ +E + E++ ++H + V ER FL L G Sbjct: 181 PFHSELGPPLFMPAVGQGALGLEYRSDRQDLAEMLAFLDHRPSRICVEAERGFLFGLQGG 240 Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C+ IAG+A G ++ G+V DG + G DA + G A ++ Sbjct: 241 CQVPIAGYAVMTGDNSFELTGLVAELDGTAVIRRTAAGTEADARDTGLTLAAQVK 295 >gi|254181386|ref|ZP_04887983.1| porphobilinogen deaminase [Burkholderia pseudomallei 1655] gi|184211924|gb|EDU08967.1| porphobilinogen deaminase [Burkholderia pseudomallei 1655] Length = 329 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 101/263 (38%), Positives = 153/263 (58%), Gaps = 2/263 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+ Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAALMSREDPRDAFVSNDYASLDALPAGAVV 133 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+ Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC+ Sbjct: 194 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVP 253 Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270 +A A +G L+ G V +DG Sbjct: 254 LAAHAVWRGGELHLTGSVSTTDG 276 >gi|291298238|ref|YP_003509516.1| porphobilinogen deaminase [Stackebrandtia nassauensis DSM 44728] gi|290567458|gb|ADD40423.1| porphobilinogen deaminase [Stackebrandtia nassauensis DSM 44728] Length = 307 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 106/295 (35%), Positives = 159/295 (53%), Gaps = 10/295 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SP+ALA A ++L + P + I+P +T GD+ L+++GGKG FT Sbjct: 5 VRIGTRSSPMALAQADRVSAALTALD--PDVAVEIVPFTTSGDKWMG-PLSQLGGKGAFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L+ G D VH KD+P L +G I+A+L R+D+RD + SL DL Sbjct: 62 KEVDAALVEGTCDLCVHCVKDIPGDRDLPEGTVIAAHLERDDVRDALVHPGGLSLSDLPD 121 Query: 124 HSVIGTSSLRRKA-LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S IGTSS RR A L L W +S + RG TRL KL+ A+LLA +G++RL Sbjct: 122 GSRIGTSSPRRAAQLALHWPR-LSPLPIRGNANTRLAKLDAGDFDALLLAVSGLERLALT 180 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EIL+++ P+ G G + ++ ++ ++LV ++ T ER+ L L+G Sbjct: 181 DRITEILDVDTMVPAIGSGTLALQCRTDDTPVRDLVARLDDPMTSWRTEAERSMLRALNG 240 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C S IAG+A + L +G V++ DG E +G DA +G A+ + Sbjct: 241 HCHSPIAGYAIQESEGVLSLHGRVMSLDGSTVLEARESG--ADATALGTSVAEAL 293 >gi|209516094|ref|ZP_03264954.1| porphobilinogen deaminase [Burkholderia sp. H160] gi|209503554|gb|EEA03550.1| porphobilinogen deaminase [Burkholderia sp. H160] Length = 332 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 103/265 (38%), Positives = 153/265 (57%), Gaps = 4/265 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 I +R S LA+ A R +L HK+ P + I+ ++T+GD+I +RTL+++GGKGLF + Sbjct: 15 IASRESRLAMWQAEHVRCAL---HKLYPSCEVKILGMTTRGDQILDRTLSKVGGKGLFVK 71 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 E+E L G D AVHS KD+P +L G +S + RED RD +S+ SL L +V Sbjct: 72 ELEAALADGRADLAVHSLKDVPMELPAGFVLSTIMEREDPRDALVSNQYDSLAALPAGAV 131 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSSLRR+A+L ++ V RG ++TR+ KL+ AI+LA AG+KRL I+ Sbjct: 132 VGTSSLRREAMLRMRYPNLDVRPLRGNLDTRVAKLDRGDYAAIILAAAGLKRLGLADRIR 191 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 +L+ ED P+ GQGA+ IE + + ++H+ T +V ER L GSC+ Sbjct: 192 ALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHQHTAAAVEAERMVSRALGGSCEV 251 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGK 271 +A +A L+ GIV DG+ Sbjct: 252 PLAAYATWGDGALHLRGIVATPDGQ 276 >gi|71064670|ref|YP_263397.1| hydroxymethylbilane synthase [Psychrobacter arcticus 273-4] gi|71037655|gb|AAZ17963.1| hydroxymethylbilane synthase [Psychrobacter arcticus 273-4] Length = 345 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 100/294 (34%), Positives = 157/294 (53%), Gaps = 23/294 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR SPLAL A R L+ ++ P I ++ + TKGD+I + L +IGGKGLF Sbjct: 12 LNIATRQSPLALWQAEHIRDRLLVLY--PEMTINLLKIVTKGDKILDTPLAKIGGKGLFV 69 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L + D AVHS KD+P L +GL + Y R D F+S+T S+ +L + Sbjct: 70 KELEQALYDKQADIAVHSLKDVPMDLPEGLTLGVYCKRASPTDAFVSNTYHSIDELPQGA 129 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GT+SLRR+ + +R+D+ + RG + TRL+KL+ + AI+LA +G++RL+ I Sbjct: 130 VVGTASLRRQCQIKAYRADLQIKTLRGNVGTRLSKLDAGEYDAIILATSGLQRLELNARI 189 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L+I+ P+ GQGA+ IE ++ + +L+ +N + + ERA L G C+ Sbjct: 190 RSELDIDICLPAVGQGALAIECRADDDEVLKLLAPLNDDKARIRLIAERALNRHLQGGCQ 249 Query: 246 SAIAGFAYCK---------------------GSTLYFYGIVLASDGKIFHEVSR 278 IA +A + G TL+ G V DG +V + Sbjct: 250 VPIAAYAVLQKADALAADNDDNGSVSNNNDAGDTLWLRGRVGQEDGSELLKVEK 303 >gi|313673928|ref|YP_004052039.1| hydroxymethylbilane synthase [Calditerrivibrio nitroreducens DSM 19672] gi|312940684|gb|ADR19876.1| hydroxymethylbilane synthase [Calditerrivibrio nitroreducens DSM 19672] Length = 308 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 108/306 (35%), Positives = 157/306 (51%), Gaps = 4/306 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK I TR S LAL A +S L ++ P + + + T+GD I + L +IGG Sbjct: 1 MEK--ITIATRGSKLALWQANHIKSLL--TNRYPEMLVELKIIKTQGDIILDVPLAKIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE LI E D AVHS KD+P +L L+I RE D F+S +L + Sbjct: 57 KGLFVKEIENALIENEADLAVHSMKDVPVELPDELEIYVNPHRESPFDAFLSVKYNNLDE 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRRK + R R DI + D RG ++TR+ KL AI+LA AG+ RL Sbjct: 117 LPRGAKLGTSSLRRKVQISRIRPDIEITDLRGNVDTRIRKLTEGTFDAIILARAGLNRLN 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + K + + PS QG + IE ++ + + ++K + E T ERAFL L Sbjct: 177 LLEWAKYTFDDSEIVPSVCQGTLGIEVRKDDDRIKNILKFMKDEKTEIVTRAERAFLRRL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C++ I G+ +G L G + + DG F + G+ +G A+ I Sbjct: 237 EGGCQAPIGGYCKIEGGKLKMIGFLSSLDGDEFLKYEEYGDMDKPEVLGESVAEKILING 296 Query: 301 NKNVFN 306 K + + Sbjct: 297 GKKILD 302 >gi|145592923|ref|YP_001157220.1| porphobilinogen deaminase [Salinispora tropica CNB-440] gi|145302260|gb|ABP52842.1| hydroxymethylbilane synthase [Salinispora tropica CNB-440] Length = 322 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 99/294 (33%), Positives = 156/294 (53%), Gaps = 11/294 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K P R+GTR S LA+A + + +L P + ++ + T GDR T + ++G G Sbjct: 2 KVPLRLGTRGSALAMAQSGQVAEALTAATGTP---VELVEVVTTGDRSTA-PVHQLG-VG 56 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F + L +G ID AVHS KD+PT GL ++A PR+D RD ++ ++L +L Sbjct: 57 VFVSALRDALAAGAIDFAVHSYKDLPTAAAPGLYVAAVPPRQDPRDALVATGGRTLAELP 116 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLK 180 + +GT +LRR A L + V RG + TRL ++ +A A++LA AG+ RL Sbjct: 117 PGARVGTGALRRIAQLHALGLQLEVQPIRGNVGTRLARVLGPEADLDAVVLARAGLARLD 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I E L+ P+P QGA+ +E ++ EL+ V++H + +V ERA LA L Sbjct: 177 RTDTITETLDPMLMLPAPAQGALAVECRSDDSALVELLAVLDHAPSRATVVAERALLATL 236 Query: 241 DGSCKSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 + C + +A +A G +Y G V++ DG +SR G DA+ IG+ Sbjct: 237 EAGCSAPVAAYAELAEGDVGEEIYLRGAVISPDGTRDLRLSRTGTPADAVEIGK 290 >gi|317402904|gb|EFV83446.1| HemC protein [Achromobacter xylosoxidans C54] Length = 314 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 100/282 (35%), Positives = 148/282 (52%), Gaps = 2/282 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A R L ++ P + ++ L+T+GD+I +RTL+++GGKGLF +E Sbjct: 9 IATRASRLALWQAEHVRDRLRTLY--PACAVELLTLTTRGDQILDRTLSKVGGKGLFVKE 66 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L+ G D AVH KDMP + ++ A L R D RD F+S+ +L DL +V+ Sbjct: 67 LETALLDGRADLAVHCLKDMPVDMQAPFELCAVLDRADPRDAFVSNRYATLADLPAGAVV 126 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR++ + + V RG ++TRL KL+ + AI+LA AG+ RL I Sbjct: 127 GTSSLRRESQIRARYPQLLVKPLRGNLDTRLGKLDRGEYDAIVLAAAGLNRLGLTDRISS 186 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L+ + P+ GQGA+ IE + + + +N ERA L GSC+ Sbjct: 187 LLDPAESLPAAGQGALTIEIRDDRDDMRAWLAPLNDAGATSISLAERAVSRRLGGSCQVP 246 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +A +A TL +V + DG +G A IG Sbjct: 247 LAAYAEIADDTLTLRALVASPDGTRMLRAHGSGPVAQAQAIG 288 >gi|302549045|ref|ZP_07301387.1| porphobilinogen deaminase [Streptomyces viridochromogenes DSM 40736] gi|302466663|gb|EFL29756.1| porphobilinogen deaminase [Streptomyces viridochromogenes DSM 40736] Length = 311 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 103/291 (35%), Positives = 147/291 (50%), Gaps = 6/291 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L H P ++P+ T GD+ L+++ GKG FT Sbjct: 7 IRIVSRDSPMALAQVERVRTELAAAH--PGVRTEVVPVKTTGDKWMG-DLSQVEGKGAFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +A+L R+DIRD I +L +L Sbjct: 64 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTVFAAFLERDDIRDALIHPDGLTLDELPA 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSS+RR A L + + FRG RL KL +A A+LLA AG++R+ ++ Sbjct: 124 GTRIGTSSVRRVAQLAATHPHLECVPFRGNANRRLAKLAAKEADALLLAVAGLERIGRQD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI EIL+ E P G G + ++ ++ + V + DT+ ER FL L G Sbjct: 184 VISEILSTETMMPPIGAGVLALQCREDDADLIDAVSGLGDPDTYRETMAERMFLHVLQGH 243 Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 C S IAGFA+ + L V DGK R D +G A Sbjct: 244 CNSPIAGFAHVDRSGELSLRACVFTPDGKTRLNAHEWAGRLDPATLGTSVA 294 >gi|134281147|ref|ZP_01767856.1| porphobilinogen deaminase [Burkholderia pseudomallei 305] gi|134247453|gb|EBA47538.1| porphobilinogen deaminase [Burkholderia pseudomallei 305] Length = 329 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 101/263 (38%), Positives = 153/263 (58%), Gaps = 2/263 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+ Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+ Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC+ Sbjct: 194 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVP 253 Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270 +A A +G L+ G V +DG Sbjct: 254 LAAHAVWRGGELHLTGSVSTTDG 276 >gi|189220198|ref|YP_001940838.1| Porphobilinogen deaminase [Methylacidiphilum infernorum V4] gi|189187056|gb|ACD84241.1| Porphobilinogen deaminase [Methylacidiphilum infernorum V4] Length = 298 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 108/284 (38%), Positives = 154/284 (54%), Gaps = 11/284 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 KP IG+R S LAL A SL + P +I I + T GD + + + +I +G+ Sbjct: 2 KPLIIGSRGSRLALIQAQLIVDSLKKEY--PLLDIQIRVIKTTGDHLEAQPIRDIDQRGI 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EIE KL+ GEID AVHS KD+ +L L I+A PRED RD +IS L Sbjct: 60 FTKEIENKLLEGEIDLAVHSLKDLQVELHPRLVIAAIPPREDPRDCWISLQHPHPSSLQA 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKKE 182 +++ T S RR LLR R D+ ++ RG +E+RL KL N+ +LA AGIKRL + Sbjct: 120 GAIVVTGSPRRANQLLRKRPDLRIVPVRGNVESRLRKLRENRQWQGTVLALAGIKRLGID 179 Query: 183 --KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 L+++ P+PGQGA+ ++ + + Q LVK +N T +V ER FL EL Sbjct: 180 ISSFFCTPLSMDWMLPAPGQGALALQARIEDKHTQSLVKHLNDFSTACAVTAERVFLHEL 239 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGI------VLASDGKIFHEVSR 278 G C++A+ A +GS L GI + +GK+ E+ R Sbjct: 240 GGGCRTAVGARAEVEGSRLVLEGIWWPQQAIEPKEGKVVGEIHR 283 >gi|94676875|ref|YP_588539.1| porphobilinogen deaminase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|123384158|sp|Q1LU25|HEM3_BAUCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|94220025|gb|ABF14184.1| porphobilinogen deaminase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 311 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 95/268 (35%), Positives = 149/268 (55%), Gaps = 2/268 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +I TR SPLA+ A R+ L+ + P I ++P+ T GD I ++ L + GGK LF Sbjct: 6 LKIATRQSPLAIWQANYVRNQLLSFY--PTLLIELVPIVTSGDLILDKPLMKAGGKRLFI 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ ++ D AVHS KD+ +G+ ++ RED RD FIS S+ L + Sbjct: 64 KELEQAMLERRADIAVHSMKDITISFPEGIGLAVLCAREDPRDAFISTHYASIDLLPTGA 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSS+RR+ L R D+ + D RG I TRL KL+ + A++LA AG+KRL I Sbjct: 124 VVGTSSMRRQCQLRERRPDLVMRDLRGNIGTRLEKLDKGEYDALILAAAGLKRLDLAHRI 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + I++ + P+ GQG I IE + + ++ ++H T V+ ERA A+L G C+ Sbjct: 184 RMIIDPTELLPAVGQGVIGIEYRLEDTHILSILAPLHHSATALRVSAERAMNAKLAGGCQ 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIF 273 I +A +G ++ +V + DG + Sbjct: 244 VPIGSYAEIEGDQIWLRALVGSPDGSLI 271 >gi|302391331|ref|YP_003827151.1| hydroxymethylbilane synthase [Acetohalobium arabaticum DSM 5501] gi|302203408|gb|ADL12086.1| hydroxymethylbilane synthase [Acetohalobium arabaticum DSM 5501] Length = 314 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 105/291 (36%), Positives = 163/291 (56%), Gaps = 4/291 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LA+ A E + ++ + + + + TKGD+I + L+++GGKGLF +E Sbjct: 8 IGTRSSDLAVGQA-EIVAEMLG-KAVSEYEFELEKIKTKGDKILDSPLSQVGGKGLFIKE 65 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L+ EID AVHS KDMP +L +GL + + R D RD +S+ ++L +L + I Sbjct: 66 LEVSLLEEEIDLAVHSMKDMPAELPEGLAVLGFPERVDSRDALVSNGDRNLDELPTGARI 125 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRLKKEKVI 185 GT SLRR + LL +R D+ V+ RG I TRL KL + + AI+LA AG+ R+ + I Sbjct: 126 GTGSLRRTSQLLNYRPDLEVVPIRGNINTRLEKLTAEELNLDAIVLAAAGLIRMGWKDKI 185 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ E P+ GQGA+ IE ++ + + L+ I+ + T + ER FL LDG C+ Sbjct: 186 TEYLDDEVMLPAAGQGALAIEAREDDEEIKTLINKIDDQRTRYILQAERGFLERLDGDCQ 245 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I A +G + G+V DG+ G+ +A +G + A+ + Sbjct: 246 VPIGALAEIEGEEITLEGMVATLDGQKHLRDQITGSVGEAEELGIELAEEL 296 >gi|239637532|ref|ZP_04678504.1| porphobilinogen deaminase [Staphylococcus warneri L37603] gi|239596750|gb|EEQ79275.1| porphobilinogen deaminase [Staphylococcus warneri L37603] Length = 308 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 101/270 (37%), Positives = 157/270 (58%), Gaps = 4/270 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + L V P +I I + TKGDRI ++ L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQSQQFIDKLKQVR--PDLDIEIKEIVTKGDRIVDKQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+ +L +ID A+HS KD+P+ + +GL + RE D +IS L++L S+I Sbjct: 64 IQNELFEKQIDMAIHSLKDVPSVIPEGLTLGCIPDREVPFDAYISKNHTPLRELPEGSII 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L + + RG I+TRL KL AI+LA AG++R+ + ++ Sbjct: 124 GTSSLRRGAQILSKYPHLEIKWIRGNIDTRLQKLETEDYDAIILAAAGLRRMGWSDDIVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ + P+ GQGA+ IE ++ + EL+K ++++D V ER FLAE+DGSC+ Sbjct: 184 TYLDKDILLPAIGQGALGIECRSDDEELLELLKEVHNKDVEKCVTAERTFLAEMDGSCQV 243 Query: 247 AIAGFAYCKG-STLYFYGIVLASDGKIFHE 275 I G+A + F G+++ DG +E Sbjct: 244 PIGGYATINSQQQIEFTGLIMTPDGTERYE 273 >gi|54295573|ref|YP_127988.1| porphobilinogen deaminase HemC [Legionella pneumophila str. Lens] gi|61213284|sp|Q5WT65|HEM3_LEGPL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|53755405|emb|CAH16901.1| Porphobilinogen deaminase HemC [Legionella pneumophila str. Lens] Length = 309 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 106/283 (37%), Positives = 154/283 (54%), Gaps = 7/283 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A R L V + P +I ++P+ T GDR L GG Sbjct: 1 MSAKIIRIATRQSPLALWQANHVREML--VKQWPNLSIELLPMITSGDRFLKDKLLSAGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL Sbjct: 59 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLSLAAICKRDNPFDALISPQFKSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++IGTSSLRR++ LL + ++ V RG I TRL+KL + + AI+LA AG++R+ Sbjct: 119 LPKNAIIGTSSLRRQSQLLAYNPNLQVKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ + P+ QGA+CIE ++ + QEL+ +N + V+ ER A+L Sbjct: 179 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELIYGLNDPISALCVHTERRVNAKL 238 Query: 241 DGSCKSAIAGFAYCKGST---LYFYGIVLASDGKIFHEVSRNG 280 G+C A YC + L VL DG + + G Sbjct: 239 GGNCHIPFA--VYCTITAENLLLLRAKVLNLDGSQMIDDEQQG 279 >gi|70726258|ref|YP_253172.1| porphobilinogen deaminase [Staphylococcus haemolyticus JCSC1435] gi|123748643|sp|Q4L709|HEM3_STAHJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|68446982|dbj|BAE04566.1| porphobilinogen deaminase [Staphylococcus haemolyticus JCSC1435] Length = 310 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 102/292 (34%), Positives = 167/292 (57%), Gaps = 6/292 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + L V P I I + TKGDRI N+ L+++GGKGLF +E Sbjct: 6 VGSRRSKLALTQSQQFIDKLKAVD--PTLEIEIKEIVTKGDRIVNKQLSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+++L EID A+HS KD+P+ + +GL + RE D +IS L +L S+I Sbjct: 64 IQQELFDKEIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHIPLNELPDGSII 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + ++ Sbjct: 124 GTSSLRRGAQILSKYPNLEIKWIRGNIDTRLKKLEIEDYDAIILAAAGLRRMGWSDDIVT 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ + P+ GQGA+ IE ++ + EL+ ++++ + V ER FL+ +DGSC+ Sbjct: 184 TYLDKDILLPAIGQGALGIECRSDDVELLELLSKVHNQAVANCVTAERTFLSAMDGSCQV 243 Query: 247 AIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 I G+A K + F G+++ DG +E + G + +++G ++ ++ Sbjct: 244 PIGGYATNKENGEIEFTGLIMTPDGTKRYEHTEVGK--NPVDLGEAVSRVLK 293 >gi|120602319|ref|YP_966719.1| porphobilinogen deaminase [Desulfovibrio vulgaris DP4] gi|158513905|sp|A1VCX6|HEM3_DESVV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|120562548|gb|ABM28292.1| hydroxymethylbilane synthase [Desulfovibrio vulgaris DP4] Length = 315 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 107/290 (36%), Positives = 157/290 (54%), Gaps = 2/290 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A E SL++ ++ + + TKGD I + L ++GGKGLF +E Sbjct: 6 IATRGSKLALWQA-EHIKSLIETEHAGKVDVSLKIIKTKGDIILDVPLAKVGGKGLFVKE 64 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ L+ G D AVHS KD+P +L +GL + RE+ D +S SL L + + Sbjct: 65 IEEALLDGSADLAVHSMKDVPMELPEGLFLGCIPEREEPSDTLLSVRYASLDALPHGARV 124 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR++ LL R D+ +I RG ++TRL KL + + AI++A AG+KRL E Sbjct: 125 GTSSLRRQSQLLALRPDLDIISLRGNVDTRLRKLMDGEFDAIVMATAGLKRLGLSAPHHE 184 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L F P+ GQGA+ IE + ++++ ++H T V ER FLA L+G C+ Sbjct: 185 VLAPPRFLPAVGQGALGIEFREDRADLRDMLAFLDHRPTRIRVEAERGFLAGLEGGCQVP 244 Query: 248 IAGFAYCKGSTLY-FYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 IAG A G + G+V G+ + G +A N G + A + Sbjct: 245 IAGHAVMTGDDDFRIEGLVADLKGERVIRRTLEGTGANARNRGLELASQV 294 >gi|170691941|ref|ZP_02883105.1| porphobilinogen deaminase [Burkholderia graminis C4D1M] gi|170143225|gb|EDT11389.1| porphobilinogen deaminase [Burkholderia graminis C4D1M] Length = 318 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 104/271 (38%), Positives = 157/271 (57%), Gaps = 4/271 (1%) Query: 30 VHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMP 88 +HK+ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E+E L G D AVHS KD+P Sbjct: 11 LHKLYPSCDVKILGMTTRGDQILDRTLSKVGGKGLFVKELEAALADGRADLAVHSLKDVP 70 Query: 89 TKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVI 148 +L G +S + RED RD +S+ SL L +V+GTSSLRR+A+L + V Sbjct: 71 MELPAGFALSTIMEREDPRDALVSNDYDSLAALPAGAVVGTSSLRREAMLRMRYPHLEVR 130 Query: 149 DFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH 208 RG ++TRL KL+ AI+LA AG+KRL E I+ +L+ ED P+ GQGA+ IE Sbjct: 131 PLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEGRIRALLDPEDSLPAAGQGALGIEIR 190 Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS 268 + + + ++HE T +V ER L GSC+ +A +A L+ GIV Sbjct: 191 SDRAELAAWLAPLHHEHTAAAVEAERMVSRVLGGSCEVPLAAYATWHDGALHLRGIVATP 250 Query: 269 DGK--IFHEVSRNGNRCD-AINIGRDAAQYI 296 DG+ + + S + AI +GR+ A + Sbjct: 251 DGQRVLSAQASAPAPTTERAIALGREVANAL 281 >gi|167910007|ref|ZP_02497098.1| porphobilinogen deaminase [Burkholderia pseudomallei 112] Length = 278 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 101/263 (38%), Positives = 153/263 (58%), Gaps = 2/263 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+ Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+ Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC+ Sbjct: 194 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVP 253 Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270 +A A +G L+ G V +DG Sbjct: 254 LAAHAVWRGGELHLTGSVSTTDG 276 >gi|254458597|ref|ZP_05072022.1| porphobilinogen deaminase [Campylobacterales bacterium GD 1] gi|207084905|gb|EDZ62192.1| porphobilinogen deaminase [Campylobacterales bacterium GD 1] Length = 319 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 99/296 (33%), Positives = 167/296 (56%), Gaps = 6/296 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A+ ++ + + P + + + + GD++ ++ L IGGKG FT+E Sbjct: 6 IATRVSDLALWQAYHIKARVEASY--PEITVELNKIVSNGDKVLDKPLALIGGKGHFTKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E ++++G D AVHS KD+PT + +GL++ A R+D DVF+SH +L+DL +V+ Sbjct: 64 LEDEMLAGNADIAVHSLKDVPTYIPEGLELVAVTQRQDQSDVFLSHKHATLEDLPQGAVV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK--KEKVI 185 GT+SLRR+ LL+ R D+ V D RG + TRL KL+ + AI+LA+ G+ RL K+ Sbjct: 124 GTTSLRRRMQLLQQRPDLKVKDLRGNVNTRLRKLSEGQYDAIILAWIGLHRLDLLKDVPF 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L+++ P GQ A+ IE N K +E+ + + +T+ ER F++++ C Sbjct: 184 TQKLSLDMMIPPMGQAALGIEIVCGNAKVREIAESLKDLNTFICTQIERDFISKIGAGCS 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 + +A A + + F ++ DG + N D+ N+G + A+ + I N Sbjct: 244 APVACNAVIDDNIITFRVMLGFPDGTNIMQEKVVINVEDSDNLGSELAK--KMIDN 297 >gi|294789041|ref|ZP_06754281.1| hydroxymethylbilane synthase [Simonsiella muelleri ATCC 29453] gi|294483143|gb|EFG30830.1| hydroxymethylbilane synthase [Simonsiella muelleri ATCC 29453] Length = 311 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 103/292 (35%), Positives = 160/292 (54%), Gaps = 7/292 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A ++ L ++ P ++ I+ ++T+GD+I ++TL++IGGKGLF +E Sbjct: 9 IASRESALAMWQAQHIQAQLQQLY--PQCDVSILGMTTQGDQILDKTLSKIGGKGLFVKE 66 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L +G + A R + D F+S+ L+DL +++ Sbjct: 67 LEVALQDGRADLAVHSIKDVPMVLPEGFALVAISERANPFDAFVSNHYTRLEDLPKGAIV 126 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A L +++ RG ++TRL KL+N AI+LA AG++RL+ I+ Sbjct: 127 GTSSLRREAQLRARFPHLTIQPLRGNVQTRLAKLDNGDYDAIILAAAGLERLELHNRIRH 186 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L+ D P+ GQGA+ IE + + +NH T V ERA L GSC+ Sbjct: 187 VLSPADSLPAAGQGALGIEIAAHRTDLIATLLPLNHAKTAACVTAERALARALGGSCQVP 246 Query: 248 IAGFAYCK---GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +A AYC L +G+V DG + + A +GR A+ + Sbjct: 247 LA--AYCTADDAGLLTLHGLVAHPDGSVVLNANAQAPAQYADALGRAVAKKL 296 >gi|209526164|ref|ZP_03274695.1| porphobilinogen deaminase [Arthrospira maxima CS-328] gi|209493420|gb|EDZ93744.1| porphobilinogen deaminase [Arthrospira maxima CS-328] Length = 322 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 104/299 (34%), Positives = 157/299 (52%), Gaps = 5/299 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + RI +R S LAL + + L + P + +ST+GD+I + L +IG K Sbjct: 8 QTRTIRIASRKSQLALVQTYWVQEELQK--RFPDIKFEVHTMSTQGDKILDVALAKIGDK 65 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118 GLFT+E+E +++ + D AVHS KD+PT L +GL + RED D + +H + L Sbjct: 66 GLFTKELEVGMLNHDTDMAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVHENHRDKQL 125 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L +V+GTSSLRR A L + D RG + TRL KL+ + AI+LA AG+KR Sbjct: 126 DTLPPGAVVGTSSLRRLAQLRHNFPHLEFKDIRGNLNTRLQKLDEGQYDAIILAVAGLKR 185 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L I +++ E + GQGA+ +E + + E+VK + H T + ERAFL Sbjct: 186 LGMADRIHQVIPAEISLHAVGQGALGLECREGDTEIFEVVKALEHTVTAQRCHSERAFLR 245 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I +G L G+V + DGK + + G DA +G A ++ Sbjct: 246 ELEGGCQVPIGVNTMVEGDRLTLTGMVASLDGKRLIKDTVTGQASDAEQLGIQLAHKLK 304 >gi|167918037|ref|ZP_02505128.1| porphobilinogen deaminase [Burkholderia pseudomallei BCC215] Length = 276 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 101/263 (38%), Positives = 153/263 (58%), Gaps = 2/263 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+ Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+ Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC+ Sbjct: 194 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVP 253 Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270 +A A +G L+ G V +DG Sbjct: 254 LAAHAVWRGGELHLTGSVSTTDG 276 >gi|317064836|ref|ZP_07929321.1| porphobilinogen deaminase [Fusobacterium ulcerans ATCC 49185] gi|313690512|gb|EFS27347.1| porphobilinogen deaminase [Fusobacterium ulcerans ATCC 49185] Length = 299 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 103/264 (39%), Positives = 145/264 (54%), Gaps = 4/264 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60 KK IG+R S LA+A + + L + P I + T GD ++N ++ Sbjct: 2 KKKIVIGSRGSILAMAQSEMIKKMLE--NNFPELEFEIKKIVTSGDTDLVSNWNNSDKSL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE +L++G ID AVHS KDMP +GL A RED RDV +S + ++L + Sbjct: 60 KSFFTKEIEVELLNGTIDLAVHSMKDMPVVSPEGLICGAVPDREDSRDVLVSKSGKTLME 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR L RSD+ + RG I TRLNKL N AILLA AG+KR+ Sbjct: 120 LPAGAIVGTSSLRRTMNLKNLRSDLEIKQLRGNIHTRLNKLKNEDYDAILLAAAGLKRVG 179 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 EK I E L+ E F P+P QG + I+ N+ + ++++K I++ED V ER F Sbjct: 180 LEKEITEYLDPEKFLPAPAQGVLHIQCRENDDEVKKILKSIHNEDIEKVVVIEREFSKIF 239 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGI 264 DG C + + G + GI Sbjct: 240 DGGCHTPMGCHCILDGDKITLTGI 263 >gi|254796754|ref|YP_003081590.1| porphobilinogen deaminase [Neorickettsia risticii str. Illinois] gi|254589999|gb|ACT69361.1| porphobilinogen deaminase [Neorickettsia risticii str. Illinois] Length = 286 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 104/288 (36%), Positives = 159/288 (55%), Gaps = 11/288 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++G RCS LALA A +L + I ++ + T GD +++ LTE+GGK LF Sbjct: 4 LKVGARCSTLALAQARLVERALAPYCE----RIDLVGVRTSGDILSDIPLTEVGGKALFL 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+KL++GEID AVHS KD+P L++ L R DVF+S ++ L + Sbjct: 60 KELEEKLLTGEIDIAVHSMKDVPAFYHDDLEVVPVLKRAIPNDVFVSFRYPNMLSLPSGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGT + RR +++ VI RG I TR+ K N I+LA+ G++RL K+I Sbjct: 120 VIGTCAPRR---VVQLNQRFRVIPLRGNIATRVEKAKN--LDGIILAFCGLERLGLCKMI 174 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+++ + P QGA+C+E + +EL+ I+ +T ERAFL E++G CK Sbjct: 175 SEVIHEDVMLPGVAQGALCVEFRKKDHFLRELILNISDRETIICTTAERAFLEEINGDCK 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 +A+ A K +TLYF G++ + + S G+ +A IGR AA Sbjct: 235 TALGALAVVKNNTLYFTGMLGKDNRPCYFRTS--GSCLNAKQIGRSAA 280 >gi|238563412|ref|ZP_00438929.2| hydroxymethylbilane synthase [Burkholderia mallei GB8 horse 4] gi|238520765|gb|EEP84222.1| hydroxymethylbilane synthase [Burkholderia mallei GB8 horse 4] Length = 393 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 101/263 (38%), Positives = 153/263 (58%), Gaps = 2/263 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 80 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 137 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+ Sbjct: 138 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 197 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+ Sbjct: 198 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 257 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC+ Sbjct: 258 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVP 317 Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270 +A A +G L+ G V +DG Sbjct: 318 LAAHAVWRGGELHLTGSVSTTDG 340 >gi|153206963|ref|ZP_01945781.1| porphobilinogen deaminase [Coxiella burnetii 'MSU Goat Q177'] gi|154707682|ref|YP_001425472.1| porphobilinogen deaminase [Coxiella burnetii Dugway 5J108-111] gi|165918283|ref|ZP_02218369.1| porphobilinogen deaminase [Coxiella burnetii RSA 334] gi|212219568|ref|YP_002306355.1| porphobilinogen deaminase [Coxiella burnetii CbuK_Q154] gi|189028088|sp|A9KDC4|HEM3_COXBN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226706283|sp|B6J6K0|HEM3_COXB1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|120577036|gb|EAX33660.1| porphobilinogen deaminase [Coxiella burnetii 'MSU Goat Q177'] gi|154356968|gb|ABS78430.1| porphobilinogen deaminase [Coxiella burnetii Dugway 5J108-111] gi|165918143|gb|EDR36747.1| porphobilinogen deaminase [Coxiella burnetii RSA 334] gi|212013830|gb|ACJ21210.1| porphobilinogen deaminase [Coxiella burnetii CbuK_Q154] Length = 307 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 107/297 (36%), Positives = 160/297 (53%), Gaps = 6/297 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIG 59 ++K+ I TR SPLAL A + + + H PH I+ +T+GDR+T L + G Sbjct: 2 IKKRSILIVTRKSPLALWQAEFVKQQIENSH---PHLACQILGCTTQGDRLTTEKLVDSG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GK LF ++++K L++ + D AVHS KDM L + A++ RED RDV I L Sbjct: 59 GKDLFVKDLQKALLNRDADIAVHSIKDMSACDGPELMVGAFIRREDPRDVLI--VKGELS 116 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L H+VIGTSS RR+ L +++ + + RG + TRL KL+ AI+LA AG+KRL Sbjct: 117 TLPPHAVIGTSSPRRQCQLKKFQPGCKIKEIRGNVGTRLAKLDAGHYEAIVLAAAGLKRL 176 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E I + +F P+ GQGAI +E ++ + Q L+K ++H +T V ERA + Sbjct: 177 GLENRIHYYFDPHEFIPAIGQGAIGVECRSDDHEMQTLLKSLDHRETRLCVTAERAVNEK 236 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L G C + IA A K L + ++ DG++ + GN +A IG A + Sbjct: 237 LGGDCFTPIAAHAIIKNDQLSLFAMLGKIDGRVIIRATEIGNSEEAQRIGFKVASQL 293 >gi|332706560|ref|ZP_08426621.1| hydroxymethylbilane synthase [Lyngbya majuscula 3L] gi|332354444|gb|EGJ33923.1| hydroxymethylbilane synthase [Lyngbya majuscula 3L] Length = 322 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 106/297 (35%), Positives = 158/297 (53%), Gaps = 5/297 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + + L P + +ST GD+I + L++IG KGL Sbjct: 10 RTIRIGSRKSQLALIQTYWVQEQLK--KHFPDREFEVQTMSTHGDKILDVALSKIGDKGL 67 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKD 120 FT+E+E ++ EID AVHS KD+PT+L +GL + RE+ D + H + ++ Sbjct: 68 FTKELELGMLRDEIDFAVHSLKDLPTRLPEGLVLGCVTERENPADALVMHQKHLDKQIET 127 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S+IGTSSLRR A L +S D RG + TRL KL+ A++LA AG+KRL Sbjct: 128 LPEGSIIGTSSLRRLAQLRYHFPHLSFKDVRGNLNTRLAKLDAGDYDALILAVAGLKRLD 187 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +IL E + GQGA+ IE ++ + EL+ I H T ER+ L L Sbjct: 188 MSDRIHQILPPEISLHAVGQGALGIECREDDQEVLELLNAIAHPPTAQRCYAERSLLRAL 247 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +G C+ I +G+TL IV + DG+ + + G + A N+G + A+ ++ Sbjct: 248 EGGCQVPIGVDTQLEGNTLTLTAIVASVDGQKLVKDTIQGEQSQAENLGLELAEQLK 304 >gi|328949818|ref|YP_004367153.1| Porphobilinogen deaminase [Marinithermus hydrothermalis DSM 14884] gi|328450142|gb|AEB11043.1| Porphobilinogen deaminase [Marinithermus hydrothermalis DSM 14884] Length = 305 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 107/301 (35%), Positives = 158/301 (52%), Gaps = 9/301 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LAL L + + P I + T+GDR T +I F +E Sbjct: 6 VGTRGSALALTQTRWVVERLKE--QWPEAEFKIKTIQTRGDRGAPPTDRDI-----FVKE 58 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLALHSV 126 +E+ L+ GEID AVHS KD+PT+ +GL I++ R D RDVFI + L+DL +V Sbjct: 59 LEEALLRGEIDIAVHSLKDLPTEQPEGLVIASIPKRVDPRDVFIGRNGIRRLEDLPEGAV 118 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSS+RRKA LL +R D+ V + RG ++TRL+ L + + I+LA AG+ RL I Sbjct: 119 VGTSSVRRKAQLLAYRPDLVVRELRGNVDTRLSALGSGEFDGIILAAAGLLRLDLRNRID 178 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 ++ + P+PGQGA+ +E + A EL I+H T D ER+FL L C + Sbjct: 179 AFIDPKIMLPAPGQGALALEVREGDDIADELAYSIHHHPTDDRTTAERSFLHHLGAGCLA 238 Query: 247 AIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + A+ + TL G+V+A DG G+ +A +G + A+ I K + Sbjct: 239 PVGALAHVEEDGTLRLEGVVVAPDGSSMIHGEIEGDAEEAWELGAELARDILEQGGKRIL 298 Query: 306 N 306 Sbjct: 299 E 299 >gi|157164515|ref|YP_001466695.1| porphobilinogen deaminase [Campylobacter concisus 13826] gi|259647804|sp|A7ZD37|HEM3_CAMC1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|112800491|gb|EAT97835.1| porphobilinogen deaminase [Campylobacter concisus 13826] Length = 309 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 106/300 (35%), Positives = 159/300 (53%), Gaps = 7/300 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR S LAL + ++ + HK +V+ + TKGD I + L +IGGKGL Sbjct: 2 KEIKIATRKSILALWQSEHIKARIEAQHK--GMKVVLEGMKTKGDVILDTPLAKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E ++ GE D AVHS KD+P +GL+++A RED RD IS DL Sbjct: 60 FTKELEDSMLKGETDIAVHSLKDVPVVFPEGLRLAAICSREDTRDAMISEKFAKFSDLPH 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GT+SLRRK LL R D+ +I RG ++TRL KL + AI+LA AGI RL + Sbjct: 120 GAKVGTTSLRRKMQLLIMRPDLEIISLRGNVQTRLRKLKEGEFDAIILAMAGINRLNIKA 179 Query: 184 VIKEI--LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I ++ P+ GQGA+ IE + + + +N E+ ER F++ L+ Sbjct: 180 EVAHIYTFGFDEMIPAMGQGALGIEAR-DEKQILDETSFLNDENAVIETTIERDFVSVLE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I A KG + IV DG + + S ++ ++G++ A +FI Sbjct: 239 GGCQVPIGISARLKGDEISIDAIVGLPDGSEYIKDSLKTSKDKFQSVGKELAH--KFIEK 296 >gi|46580299|ref|YP_011107.1| porphobilinogen deaminase [Desulfovibrio vulgaris str. Hildenborough] gi|55976453|sp|Q72AV0|HEM3_DESVH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|46449716|gb|AAS96366.1| porphobilinogen deaminase [Desulfovibrio vulgaris str. Hildenborough] gi|311233718|gb|ADP86572.1| porphobilinogen deaminase [Desulfovibrio vulgaris RCH1] Length = 315 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 107/290 (36%), Positives = 157/290 (54%), Gaps = 2/290 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A E SL++ ++ + + TKGD I + L ++GGKGLF +E Sbjct: 6 IATRGSKLALWQA-EHIKSLIETEHAGKVDVSLKIIKTKGDIILDVPLAKVGGKGLFVKE 64 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE+ L+ G D AVHS KD+P +L +GL + RE+ D +S SL L + + Sbjct: 65 IEEALLDGSADLAVHSMKDVPMELPEGLFLGCIPEREEPSDTLLSVRYASLDALPHGARV 124 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR++ LL R D+ +I RG ++TRL KL + + AI++A AG+KRL E Sbjct: 125 GTSSLRRQSQLLALRPDLDIISLRGNVDTRLRKLMDGEFDAIVMATAGLKRLGLAAPHHE 184 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L F P+ GQGA+ IE + ++++ ++H T V ER FLA L+G C+ Sbjct: 185 VLAPPRFLPAVGQGALGIEFREDRADLRDMLAFLDHRPTRIRVEAERGFLAGLEGGCQVP 244 Query: 248 IAGFAYCKGSTLY-FYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 IAG A G + G+V G+ + G +A N G + A + Sbjct: 245 IAGHAVMTGDDNFRIEGLVADLKGERVIRRTLEGTGANARNRGLELASQV 294 >gi|162147854|ref|YP_001602315.1| porphobilinogen deaminase [Gluconacetobacter diazotrophicus PAl 5] gi|209542474|ref|YP_002274703.1| porphobilinogen deaminase [Gluconacetobacter diazotrophicus PAl 5] gi|161786431|emb|CAP56013.1| Porphobilinogen deaminase [Gluconacetobacter diazotrophicus PAl 5] gi|209530151|gb|ACI50088.1| porphobilinogen deaminase [Gluconacetobacter diazotrophicus PAl 5] Length = 367 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 118/325 (36%), Positives = 167/325 (51%), Gaps = 29/325 (8%) Query: 5 PFRIGTRCSPLALAH--AFETRSS-----LMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57 P R+GTR SPLAL AF T + L D+ H I +T GD++ NR L E Sbjct: 46 PLRVGTRASPLALVQTRAFLTMLTRFCPVLRDMGAFQEHQI-----NTTGDQVQNRRLAE 100 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI------ 111 IGGKGLF +EI L G ID AVHS KD+ T L GL ++ L RED RD I Sbjct: 101 IGGKGLFAKEIHDALSDGRIDFAVHSLKDLETTLPPGLVLACTLRREDARDALILGPGAG 160 Query: 112 -----SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA 166 + A L ++++G +S+RR+A +L R D+ RG ++TRL+KL + Sbjct: 161 GRHDAADAADPYAALPRNALVGCASVRRQAQMLHVRPDLRFGLLRGNVQTRLDKLAARQC 220 Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226 A LLA AG++RL E +L+ E P+ GQG + + ++ + +EL+ I + Sbjct: 221 DATLLALAGLRRLGMEDRADIVLDPEIMVPAAGQGIVGVTVRESDVELRELLAAIEDYEA 280 Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNG 280 ERA LAELDGSC++ I G+A ++L G+V DG + G Sbjct: 281 RAVATAERALLAELDGSCRTPIGGYARLVPGLAGAEASLRLTGLVAREDGSFLLRRTVTG 340 Query: 281 NRCDAINIGRDAAQYIRFISNKNVF 305 R DA +GR+ + +R S +VF Sbjct: 341 LRADAEEMGRELGRSLRMDSPSDVF 365 >gi|29655352|ref|NP_821044.1| porphobilinogen deaminase [Coxiella burnetii RSA 493] gi|212213517|ref|YP_002304453.1| porphobilinogen deaminase [Coxiella burnetii CbuG_Q212] gi|39931503|sp|Q83A37|HEM3_COXBU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226706284|sp|B6J3T6|HEM3_COXB2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|29542624|gb|AAO91558.1| porphobilinogen deaminase [Coxiella burnetii RSA 493] gi|212011927|gb|ACJ19308.1| porphobilinogen deaminase [Coxiella burnetii CbuG_Q212] Length = 307 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 107/297 (36%), Positives = 160/297 (53%), Gaps = 6/297 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIG 59 ++K+ I TR SPLAL A + + + H PH I+ +T+GDR+T L + G Sbjct: 2 IKKRSILIVTRKSPLALWQAEFVKQQIENSH---PHLACQILGCTTQGDRLTTEKLVDSG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GK LF ++++K L++ + D AVHS KDM L + A++ RED RDV I L Sbjct: 59 GKDLFVKDLQKALLNRDADIAVHSIKDMSACDGPELMVGAFIRREDPRDVLI--VKGELS 116 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L H+VIGTSS RR+ L +++ + + RG + TRL KL+ AI+LA AG+KRL Sbjct: 117 TLPPHAVIGTSSPRRQCQLKKFQPGCKIKEIRGNVGTRLAKLDAGHYEAIVLAAAGLKRL 176 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E I + +F P+ GQGAI +E ++ + Q L+K ++H +T V ERA + Sbjct: 177 GLENRIHYYFDPHEFIPAIGQGAIGVECRSDDHEMQTLLKSLDHRETRLCVTAERAVNEK 236 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L G C + IA A K L + ++ DG++ + GN +A IG A + Sbjct: 237 LGGDCFTPIAAHAIIKNDQLSLFAMLGKIDGRVIIRATEIGNSEEAKRIGFKVASQL 293 >gi|148358525|ref|YP_001249732.1| porphobilinogen deaminase [Legionella pneumophila str. Corby] gi|148280298|gb|ABQ54386.1| porphobilinogen deaminase [Legionella pneumophila str. Corby] Length = 321 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 106/288 (36%), Positives = 156/288 (54%), Gaps = 7/288 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A R L V + P +I ++P+ T GDR L GG Sbjct: 13 MSAKIIRIATRQSPLALWQANHVRKML--VKQWPNLSIELLPMITSGDRFLKDKLLSAGG 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL Sbjct: 71 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLLLAAICKRDNPFDALISPQFKSLDA 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++IGTSSLRR++ LL + ++ + RG I TRL+KL + + AI+LA AG++R+ Sbjct: 131 LPKNAIIGTSSLRRQSQLLAYNPNLQIKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ + P+ QGA+CIE ++ + QEL+ +N + V+ ER A+L Sbjct: 191 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELIHGLNDPISALCVHTERRVNAKL 250 Query: 241 DGSCKSAIAGFAYC---KGSTLYFYGIVLASDGKIFHEVSRNGNRCDA 285 G+C A YC + L VL DG + + G +A Sbjct: 251 GGNCHIPFA--VYCTITEEKRLLLRAKVLNMDGSQMIDDEQQGKIAEA 296 >gi|126439305|ref|YP_001058121.1| porphobilinogen deaminase [Burkholderia pseudomallei 668] gi|166201498|sp|A3N700|HEM3_BURP6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|126218798|gb|ABN82304.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 668] Length = 329 Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 101/263 (38%), Positives = 153/263 (58%), Gaps = 2/263 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+ Sbjct: 74 LESALADGRADLAVHSLKDVPMVLPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+ Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC+ Sbjct: 194 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVP 253 Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270 +A A +G L+ G V +DG Sbjct: 254 LAAHAVWRGGELHLTGSVSTTDG 276 >gi|119484355|ref|ZP_01618972.1| Porphobilinogen deaminase [Lyngbya sp. PCC 8106] gi|119457829|gb|EAW38952.1| Porphobilinogen deaminase [Lyngbya sp. PCC 8106] Length = 321 Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 106/306 (34%), Positives = 161/306 (52%), Gaps = 5/306 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + ++ L P + +ST+GD+I + L +IG KGL Sbjct: 9 RTVRIGSRKSQLALVQTYWVQAELKK--HFPDIEFEVHTMSTQGDKILDVALAKIGDKGL 66 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120 FT+E+E +++ + D AVHS KD+PT L +GL + RE+ D + H + L+ Sbjct: 67 FTKELEVGMLNHDTDIAVHSLKDLPTNLPEGLMLGCVTERENPADALVVHERHKDKQLET 126 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSSLRR A L + D RG + TRL KL+ AI+LA AG+KRL Sbjct: 127 LPQGAVIGTSSLRRLAQLRHHFPHLEFKDIRGNLNTRLEKLDEGGYDAIILAVAGLKRLG 186 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I + ++ + + GQGA+ IE + E++KV+ H T + ERAFL EL Sbjct: 187 MGDRIHQTISPDVSLHAVGQGALGIECRDGDENILEILKVLEHTPTAQRCHAERAFLREL 246 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I + + + L G+V + DGK + +G +A +G D A +R Sbjct: 247 EGGCQVPIGVNSEVENNQLTLIGMVASLDGKRLIRDTVSGETTNAEQLGIDLAHRLREQG 306 Query: 301 NKNVFN 306 K + + Sbjct: 307 AKEILD 312 >gi|146329177|ref|YP_001209219.1| porphobilinogen deaminase [Dichelobacter nodosus VCS1703A] gi|158513296|sp|A5EW83|HEM3_DICNV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|146232647|gb|ABQ13625.1| porphobilinogen deaminase [Dichelobacter nodosus VCS1703A] Length = 305 Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 101/287 (35%), Positives = 151/287 (52%), Gaps = 12/287 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A L + P + ++P+ T+GD + + L++IGGK LF Sbjct: 4 LRIATRKSPLALWQAEHVAQQLKQHY--PELTVELVPIVTQGDILAHTPLSKIGGKNLFI 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E + D AVHS KD+ L +G ++A LPRE+ D +S+ L +L + Sbjct: 62 KELEIAMQQNAADIAVHSMKDVGVTLPEGFVLAAILPRENPFDALVSNHYAHLNELPNGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT SLRRK L +R D+ +ID RG + TRL KL++ A++LA AG+ RL++ I Sbjct: 122 RVGTCSLRRKMQLAHYRPDLKLIDIRGNVHTRLQKLDSGAFDALILACAGLIRLQQNARI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++IL E P+ GQGAI +E ++P ++ +NH +T V ER L G C+ Sbjct: 182 RQILPAEISLPAIGQGAIGVECRADSPFLAH-IQTLNHFETAVCVQTERVVNQRLQGDCQ 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK---------IFHEVSRNGNRC 283 IA FA G T+ + DG+ + + G RC Sbjct: 241 VPIAVFATLSGKTMTLQSRIGTIDGQRMLAHQEICALEDAEKAGARC 287 >gi|328871819|gb|EGG20189.1| porphobilinogen deaminase [Dictyostelium fasciculatum] Length = 318 Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 112/313 (35%), Positives = 164/313 (52%), Gaps = 9/313 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +KK IG+R S LAL L ++H +N + L T GDR+ N L++IG K Sbjct: 3 DKKTVYIGSRKSQLALVQTHHVIDRLKELHG-SKYNFELKTLDTVGDRVLNVALSKIGDK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ----- 116 GLFT+E+E +ISG+ID AVHS KD+PTK +GL + A RE+ D FI + ++ Sbjct: 62 GLFTKELEDLMISGDIDIAVHSLKDIPTKFPEGLGLGAITKRENCLDAFIVNASKHRPTC 121 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH-AILLAYAG 175 +L +L ++IG+SSLRR + L R + D RG + TR KL + + ++LA AG Sbjct: 122 TLAELPEGAIIGSSSLRRVSQLKRAYPHLQFKDIRGNLNTRFEKLEKSGEYDGMILAVAG 181 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 ++RL I EI+ + GQGA+ IE N+P L++ +N +DT ERA Sbjct: 182 LERLGWTDRITEIIQPTVSLYAVGQGALGIECRSNDPLIMSLLEPLNDKDTASCCIAERA 241 Query: 236 FLAELDGSCKSAIAGFAY--CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 L+EL+G C I + + + GIVL DG +S G +GR+ A Sbjct: 242 MLSELEGGCHVPIGVISSIDVERQLITLEGIVLNLDGSRAIRLSHTGPLASCHQVGRELA 301 Query: 294 QYIRFISNKNVFN 306 Q + K + N Sbjct: 302 QQLIEKGAKEILN 314 >gi|296115106|ref|ZP_06833747.1| porphobilinogen deaminase [Gluconacetobacter hansenii ATCC 23769] gi|295978207|gb|EFG84944.1| porphobilinogen deaminase [Gluconacetobacter hansenii ATCC 23769] Length = 358 Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 118/321 (36%), Positives = 166/321 (51%), Gaps = 25/321 (7%) Query: 5 PFRIGTRCSPLALAH--AFETRSS-----LMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57 P ++GTR SPLAL AF T + L D+ H I ST GD++ NR L E Sbjct: 41 PLKVGTRASPLALVQTRAFLTVLTRFCPVLRDMGAFQEHQI-----STTGDQVLNRKLAE 95 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 IGGKGLF +EI + L+ G ID AVHS KD+ T L GL ++ L RED RDV I Sbjct: 96 IGGKGLFAKEIHEALLDGRIDFAVHSLKDLETALPPGLVLACTLRREDARDVLILGPDCP 155 Query: 118 LKD-------LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAIL 170 D LA +++G +S+RR+A +L R D+ RG ++TRL+KL + A L Sbjct: 156 TPDPMDPYSALAPGALVGCASVRRQAQMLHVRPDLRFGLLRGNVQTRLDKLAARQCEATL 215 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 LA AG++RL E IL+ P+ GQG + + ++ + +EL+ I + Sbjct: 216 LALAGLRRLGMEDRADVILDPTVMVPAAGQGIVGVTVRESDVELRELLAAIEDYEARAVA 275 Query: 231 NCERAFLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284 ERA LAELDGSC++ I G+A L+ G+V DG + S +G D Sbjct: 276 TAERALLAELDGSCRTPIGGYARLIPVVAGGAPELHLTGLVAREDGSFLLKRSISGAPSD 335 Query: 285 AINIGRDAAQYIRFISNKNVF 305 A +G + +R S ++F Sbjct: 336 AARLGHALGRSLRADSPSDIF 356 >gi|119714759|ref|YP_921724.1| porphobilinogen deaminase [Nocardioides sp. JS614] gi|119535420|gb|ABL80037.1| hydroxymethylbilane synthase [Nocardioides sp. JS614] Length = 314 Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 92/291 (31%), Positives = 152/291 (52%), Gaps = 9/291 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK--G 62 P R+GTR S LA + L + + ++ +ST+GDR + GG G Sbjct: 4 PLRVGTRASVLATTQSGLVADQLREALG---REVELVTVSTEGDRTQAAGIPLQGGSATG 60 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F + L+ GE+D AVHS KD+PT +G+ ++A RED RDV ++ +L +L Sbjct: 61 VFVAALRDALLRGEVDVAVHSLKDLPTYPTEGITLAAVPVREDPRDVVVARDGLTLGELP 120 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + S +GT S RR A L + V+ RG ++TR+ K+ + + A++LA AG+ R+ + Sbjct: 121 VGSRVGTGSPRRVAQLHALGLGLEVVGIRGNVDTRIGKVRSGECDAVILARAGLARIGRL 180 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + E+L+ P+PGQGA+ +E ++P A ++ ++ +V ERA LA L+G Sbjct: 181 EAVTEVLDPLQMLPAPGQGALAVECRTDDPLAAQVAAALDDPRVRAAVTAERAVLATLEG 240 Query: 243 SCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 C + I A G L+ + L+ DG + S +G+ DA +G Sbjct: 241 GCSAPIGALAEIVEGEDGDELWVRSVALSPDGALSVRRSASGSPSDAAGVG 291 >gi|153813574|ref|ZP_01966242.1| hypothetical protein RUMOBE_03996 [Ruminococcus obeum ATCC 29174] gi|149830319|gb|EDM85411.1| hypothetical protein RUMOBE_03996 [Ruminococcus obeum ATCC 29174] Length = 312 Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 103/292 (35%), Positives = 158/292 (54%), Gaps = 10/292 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LA+ + R + + H P ++ I+ + T GD+I +RTL ++GGKGLF +E Sbjct: 12 IGSRESRLAVLQSEMVRDYIKEQH--PGLDVEILTMKTTGDKILDRTLDKVGGKGLFVKE 69 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLALHSV 126 ++K L+ G +VHS KDMP ++ + L + A+ RED RDV + A SL L Sbjct: 70 LDKALLEGRTMLSVHSLKDMPMEVPEDLPLLAFSRREDPRDVLVLPEGAASLDPL---KP 126 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +G SSLRR L D+ V RG ++TRL KL+ + ++LA AG+KRL EK I Sbjct: 127 LGCSSLRRTLQLQTIYPDMKVKSIRGNLQTRLRKLDAGEYAGLILAAAGLKRLGLEKRIH 186 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++ P+ GQG + ++ H E + ED W + ERAF+ LDG C S Sbjct: 187 RYFSADEILPAAGQGILAVQGHKG--LKYEYLSGYKDEDAWIAGTAERAFVRYLDGGCSS 244 Query: 247 AIAGFAYCKGSTLYFYGIVL-ASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +A F +G L+ G+ DG+ F + R G + +A +G A+ ++ Sbjct: 245 PVAAFGIVEGEELFLRGLYYREKDGRYFKDSIR-GPKTEAARLGMCLAEQMK 295 >gi|295839212|ref|ZP_06826145.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74] gi|197695664|gb|EDY42597.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74] Length = 314 Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 101/279 (36%), Positives = 155/279 (55%), Gaps = 14/279 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLALA E S L+ + P +I ++P++TK D+ L ++GGKGLF Sbjct: 1 MRIGTRSSPLALAQ-VEQVSGLLRKFE-PDLDIEVVPVTTKADKWQG-DLAQLGGKGLFV 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMP--TKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120 EI++ L G++D AVH KD+P + +GL +AYLPR+D+RDV + QSL Sbjct: 58 REIDQMLQRGQVDMAVHCMKDVPGDVPMPRGLIFAAYLPRDDVRDVLLVPEGSDVQSLAG 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-----HAILLAYAG 175 L + + TS++RRKA + R R D++V+ RG + +R++KL+ K A++LA AG Sbjct: 118 LPPGASVATSAVRRKAQINRVRPDLNVVRVRGLVGSRIDKLDGRKPMDHMLDAMVLARAG 177 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 ++RL +++ + + P+ G GA+ +E ++ L++ +N E T + ER Sbjct: 178 LERLDLMHRARQVFEVAEMLPAVGAGALGLECREDDDAVAYLLQQLNDEPTMTEITAERV 237 Query: 236 FLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIF 273 L L G C S IAG L G+V + DG F Sbjct: 238 MLHGLRGHCNSPIAGHCVTDPDGQLSLRGMVFSRDGSKF 276 >gi|160897675|ref|YP_001563257.1| porphobilinogen deaminase [Delftia acidovorans SPH-1] gi|160363259|gb|ABX34872.1| porphobilinogen deaminase [Delftia acidovorans SPH-1] Length = 312 Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 95/254 (37%), Positives = 140/254 (55%), Gaps = 4/254 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A ++ L + H + ++ ++TKGD+I +RTL+++GGKGLF +E Sbjct: 13 IATRESQLALWQAEHVQALL----RARGHEVELLGMTTKGDQILDRTLSKVGGKGLFVKE 68 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G AVHS KD+P +L +G ++ + RED RD F+S+ +L +L +V+ Sbjct: 69 LEVALEEGRAHIAVHSLKDVPMELPEGFVLACVMEREDPRDAFVSNRYATLAELPQGAVV 128 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+ALL R D+ + RG + TRL KL+ AI+LA AG+ RL I+ Sbjct: 129 GTSSLRRQALLQALRPDLKIEPLRGNVNTRLRKLDEGHYDAIVLAAAGLMRLGLADRIRA 188 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 P+ GQGA+ IE + + + + H+ TW +V ERA + GSC Sbjct: 189 RFEPTGMLPAAGQGALGIEVRADRQDLIDALAPLAHQTTWLTVTAERAVSRCMGGSCSMP 248 Query: 248 IAGFAYCKGSTLYF 261 +A G L Sbjct: 249 LAAHGTFDGRQLRL 262 >gi|116075276|ref|ZP_01472536.1| porphobilinogen deaminase [Synechococcus sp. RS9916] gi|116067473|gb|EAU73227.1| porphobilinogen deaminase [Synechococcus sp. RS9916] Length = 316 Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 109/300 (36%), Positives = 157/300 (52%), Gaps = 5/300 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALEQLRIASRRSQLAMVQTNWVKAELEKAH--PGLAISVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI--SHTAQ-S 117 KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + AQ Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALAVNAKNAQYK 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L SV+GTSSLRR A L + D RG + TRL KL++ + ++LA AG+ Sbjct: 119 LDTLPAGSVVGTSSLRRLAQLRHHYPHLEFKDVRGNVITRLEKLDSGEYDCLILAAAGLT 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +I+ E + GQGA+ IE +P+ EL+KV+ H T ER+FL Sbjct: 179 RLGFGDRIHQIIPSEISLHAVGQGALGIECVEGSPEVLELIKVLEHAPTAARCLAERSFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I G TL G+V + DGK +G DA IG+ A ++ Sbjct: 239 RELEGGCQVPIGVNTVIDGDTLTLTGMVASLDGKRLIRDQASGTTADAEAIGKQLADTLK 298 >gi|238926756|ref|ZP_04658516.1| hydroxymethylbilane synthase [Selenomonas flueggei ATCC 43531] gi|238885288|gb|EEQ48926.1| hydroxymethylbilane synthase [Selenomonas flueggei ATCC 43531] Length = 289 Score = 165 bits (417), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 87/210 (41%), Positives = 128/210 (60%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 L+TKGDRI + L +IGGKGLFT+E+E+ ++ +D AVHS KDMPT++ GL I A Sbjct: 19 LTTKGDRILDAPLAKIGGKGLFTKELEQAMLDDAVDLAVHSLKDMPTEVPDGLVIGAITT 78 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 R D D F+S +++DL + + +GTSSLRR+A LL R D+++ D RG + TRL KL+ Sbjct: 79 RLDPGDAFVSAHYAAVEDLPVGARVGTSSLRRRAQLLAVRPDLTICDLRGNVNTRLAKLD 138 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 + AI+LA AG+KRL E+ I+ IL P+ GQGA+ IE + ++ + Sbjct: 139 AGEFDAIVLAAAGLKRLGFERRIRTILPRSVMLPAVGQGALAIECRAGDAAILSAIEFLR 198 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFA 252 + ERAFL ++G C+ + +A Sbjct: 199 DAGMTTAAQAERAFLRRVEGGCQIPVGVYA 228 >gi|146296661|ref|YP_001180432.1| porphobilinogen deaminase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|254800238|sp|A4XK06|HEM3_CALS8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|145410237|gb|ABP67241.1| hydroxymethylbilane synthase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 290 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 102/294 (34%), Positives = 151/294 (51%), Gaps = 6/294 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIG R S L+ + I +P+ TKGD ++L + G+ Sbjct: 2 KKLRIGARDSKLSRIQVDIVARKIKQTLGIECE---FVPIKTKGDIDKTKSLKDFKSPGV 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L+S EID AVHS KD+P ++ +I A + RED RDV +S L Sbjct: 59 FVKEIELALLSREIDLAVHSLKDLPCEMDSNFEIVAVVEREDPRDVLVSKDGVGFYQLKP 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++ IGTSSLRR+ L R DI V++ RG IETRL+K+ + ++LAYA +KRL + Sbjct: 119 NAKIGTSSLRREVHLKNLRQDIQVVNIRGNIETRLSKIESEGLDGVVLAYAALKRLNLDS 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + I ++ + P PGQGAICIE ++P L K IN D + ER L L G Sbjct: 179 HVSYIFDVNEITPCPGQGAICIECLKDSPYKNILSK-INDADAYIQTQFERLVLKFLGGG 237 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C S+I F +Y + +L+ D I + S G++ D +++ + ++ Sbjct: 238 CHSSIGVFCKTDQDKIYAFASILSGDKLI--KASIEGDKDDFLSLANKLSNMLK 289 >gi|166367009|ref|YP_001659282.1| porphobilinogen deaminase [Microcystis aeruginosa NIES-843] gi|166089382|dbj|BAG04090.1| porphobilinogen deaminase [Microcystis aeruginosa NIES-843] Length = 319 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 105/297 (35%), Positives = 159/297 (53%), Gaps = 5/297 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + ++ L H P + +ST+GD+I + L +IG KGL Sbjct: 8 RSLRIGSRKSQLALVQTYWVQAELSKHH--PHRQFEVETMSTQGDKILDVALAKIGDKGL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS---LKD 120 FT+E+E ++ ID AVHS KD+PT L +GL + R + D + ++ L Sbjct: 66 FTKELEVGMLDRSIDLAVHSLKDLPTNLPEGLILGCVTERVNPADALVVNSQNQDYQLDT 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG++RL Sbjct: 126 LPEGAVVGTSSLRRLAQLRYHYPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLERLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + +++ E + GQGA+ IE +P+ E++KV+ H + D ERAFL EL Sbjct: 186 LGDRVHQVIPAEISLHAVGQGALGIECRDADPEVLEVLKVLEHAPSRDRCYAERAFLREL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +G C+ I + L G+V + DGK + S +G+ +GRD A +R Sbjct: 246 EGGCQVPIGVNTAIEDGILTLTGMVASLDGKRLIKDSVSGDPSHGEVLGRDLAHKVR 302 >gi|154505786|ref|ZP_02042524.1| hypothetical protein RUMGNA_03326 [Ruminococcus gnavus ATCC 29149] gi|153793804|gb|EDN76224.1| hypothetical protein RUMGNA_03326 [Ruminococcus gnavus ATCC 29149] Length = 295 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 107/292 (36%), Positives = 158/292 (54%), Gaps = 8/292 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RIG+R S LA+ E ++ H P + I+ + T GDRI +R+L +IGGKG Sbjct: 2 KTVIRIGSRESRLAVTQT-EIIKGQIEAH-FPHIRVEIVTMKTTGDRILDRSLEQIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+++ L G +D +VHS KDMP + + L I AY RED RDV I Q+ + Sbjct: 60 LFVKELDQALRKGRVDLSVHSLKDMPMDIPEDLPILAYSKREDPRDVLIFRQGQT--ESI 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +IGTSS RR+ L R D RG ++TRL KL A +LA AG+KRL + Sbjct: 118 SGGMIGTSSKRRRLQLERLYPDCHFQGIRGNVQTRLRKLEEEGFCATVLAAAGLKRLGMD 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + E+ P+ GQG + ++ + QEL++V+N + + ERAF+ L+G Sbjct: 178 SCIGRYFSCEEMIPAAGQGILAVQARAG--EYQELLEVLNDPRSEAAAKAERAFVKVLNG 235 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVL-ASDGKIFHEVSRNGNRCDAINIGRDAA 293 C S +A +A +GS + G+ SD F E + +GN+ +A +G A Sbjct: 236 GCTSPVAAYAEIRGSKCHITGLYWRESDENWFVEKT-SGNKKEAELLGETLA 286 >gi|257459674|ref|ZP_05624783.1| porphobilinogen deaminase [Campylobacter gracilis RM3268] gi|257443099|gb|EEV18233.1| porphobilinogen deaminase [Campylobacter gracilis RM3268] Length = 309 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 100/265 (37%), Positives = 145/265 (54%), Gaps = 7/265 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL + +SL++ I + + TKGD+I + L +IGGKGLFT+E Sbjct: 6 IATRGSVLALWQSKHI-ASLLNARGIQAQ---LKSMKTKGDKILDTPLAKIGGKGLFTKE 61 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ ++ GE AVHS KD+P + +GL ++A RED+RD IS +L + + Sbjct: 62 LEESMLRGESHIAVHSLKDVPVEFPQGLVLAAICAREDVRDAMISEKYSKFDELPRGAKV 121 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+SLRRK LL R D+ VI RG ++TRL KL + + AI+LA AGI RL +K Sbjct: 122 GTTSLRRKMQLLSMRPDLEVISLRGNVQTRLRKLKDGEFDAIILAMAGINRLNLRAEVKH 181 Query: 188 I--LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + I P+ GQGA+ IE V+ P+ ++ + E ER F+ L+G C+ Sbjct: 182 VAPFEISQMIPAMGQGALGIEA-VDEPQILRAIEFLKDERAIIETTVERDFVRVLEGGCQ 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270 I A +G ++ IV DG Sbjct: 241 VPIGINARLEGENIHISAIVGLPDG 265 >gi|167044207|gb|ABZ08888.1| putative Porphobilinogen deaminase, dipyromethane cofactor binding domain protein [uncultured marine microorganism HF4000_APKG5H11] Length = 322 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 98/287 (34%), Positives = 145/287 (50%), Gaps = 3/287 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++G+R S LAL + L P + + T+GD L +G G+F Sbjct: 18 IKVGSRGSTLALIQDHVVINRLK--ANSPALEFEVDTVRTRGDVDQTSRLAGMG-LGIFV 74 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E++L+ G++D AVHS KDMPT+L GL + A L RED RDV ++ L L + Sbjct: 75 KELEQELLDGKLDIAVHSLKDMPTQLADGLVLGAVLSREDPRDVLVNRYGCPLDGLPKGA 134 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L ++ + V+ RG +ETRL K +A +LA AG+ RL + I Sbjct: 135 KIGTSSPRRAAQLKQYAPQVEVVSIRGNVETRLRKAQGEEADGAILAAAGMIRLGLQDQI 194 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ F P PGQG + +E ++ + EL+ I+ DT ER FLA L G C Sbjct: 195 AEYLSATQFVPPPGQGILAVEARADDFRMLELLSAIDDADTRYEATAERGFLARLGGGCS 254 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292 + +A C G + + +DG+ G + D + + DA Sbjct: 255 IPVGAYARCNGDNIVMTIYMSTADGEKKFSAKIQGLKRDPLQLANDA 301 >gi|162449896|ref|YP_001612263.1| hydroxymethylbilane synthase [Sorangium cellulosum 'So ce 56'] gi|189028159|sp|A9FDP9|HEM3_SORC5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|161160478|emb|CAN91783.1| Hydroxymethylbilane synthase [Sorangium cellulosum 'So ce 56'] Length = 300 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 97/288 (33%), Positives = 156/288 (54%), Gaps = 6/288 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 + TR S LALA + SL +P ++ + + T GD+ +R+L +IGGKGLF +E Sbjct: 7 LATRRSALALAQSRAFARSLE--AAVPDLSLRELEVVTSGDKTQDRSLQDIGGKGLFIKE 64 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ D AVHS KD+P ++ L ++ RED RD ++ + L +L + + Sbjct: 65 LEEALLDRRADFAVHSIKDVPAEIAPALCLACIPAREDPRDALVTRSGALLAELPAGARV 124 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR L R D+ + RG ++TRL K+ + A++LA AG+KRL E E Sbjct: 125 GTSSLRRAVALREARPDLVIEPVRGNVDTRLRKVFDGVFDAVVLALAGLKRLGLEARATE 184 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L+ E P+ GQGA+ IE + ++++ + +T V+ ERA +A ++GSC++ Sbjct: 185 VLSPEVSLPAIGQGALGIECRTADDSVRDVLGTLADAETTICVSAERAVMAAVEGSCRTP 244 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN----GNRCDAINIGRD 291 +A +A G L+ ++ DG R GN +A +G D Sbjct: 245 VAAYAVRDGGALWLRALLAEPDGSRLRRAERRLSWPGNTREAERLGAD 292 >gi|54298727|ref|YP_125096.1| porphobilinogen deaminase [Legionella pneumophila str. Paris] gi|61213295|sp|Q5X1F2|HEM3_LEGPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|53752512|emb|CAH13944.1| Porphobilinogen deaminase HemC [Legionella pneumophila str. Paris] Length = 309 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 105/283 (37%), Positives = 154/283 (54%), Gaps = 7/283 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A R L V + P +I ++P+ T GDR L GG Sbjct: 1 MSAKIIRIATRQSPLALWQANHVREML--VKQWPNLSIELLPMITSGDRFLKDKLLSAGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL Sbjct: 59 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLSLAAICKRDNPFDALISPRFKSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++IGTSSLRR++ LL + ++ + RG I TRL+KL + + AI+LA AG++R+ Sbjct: 119 LPKNAIIGTSSLRRQSQLLAYNPNLQIKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ + P+ QGA+CIE ++ + QEL+ +N + V+ ER A+L Sbjct: 179 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELIHGLNDPISALCVHTERRVNAKL 238 Query: 241 DGSCKSAIAGFAYCKGST---LYFYGIVLASDGKIFHEVSRNG 280 G+C A YC + L VL DG + + G Sbjct: 239 GGNCHIPFA--VYCTITAEKLLLLRAKVLNLDGSQMIDDEQQG 279 >gi|159026408|emb|CAO88937.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 319 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 105/297 (35%), Positives = 159/297 (53%), Gaps = 5/297 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + ++ L H P + +ST+GD+I + L +IG KGL Sbjct: 8 RSLRIGSRKSQLALVQTYWVQAELSKHH--PHRQFEVETMSTQGDKILDVALAKIGDKGL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS---LKD 120 FT+E+E ++ ID AVHS KD+PT L +GL + R + D + ++ L Sbjct: 66 FTKELEVGMLDRSIDLAVHSLKDLPTNLPEGLILGCVTERVNPADALVVNSENQDYQLDT 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG++RL Sbjct: 126 LPEGAVVGTSSLRRLAQLRYHYPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLERLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + +++ E + GQGA+ IE +P+ E++KV+ H + D ERAFL EL Sbjct: 186 LGDRVHQVIPAEISLHAVGQGALGIECRDADPEVLEVLKVLEHAPSRDRCYAERAFLREL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +G C+ I + L G+V + DGK + S +G+ +GRD A +R Sbjct: 246 EGGCQVPIGVNTAIEDGILTLTGMVASLDGKRLIKDSVSGDPSHGEVLGRDLAHKVR 302 >gi|157736544|ref|YP_001489227.1| porphobilinogen deaminase [Arcobacter butzleri RM4018] gi|167008810|sp|A8ERI4|HEM3_ARCB4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157698398|gb|ABV66558.1| porphobilinogen deaminase [Arcobacter butzleri RM4018] Length = 312 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 110/297 (37%), Positives = 162/297 (54%), Gaps = 8/297 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK I TR S LAL + +S L++ + P I + TKGD+I + L +IGG Sbjct: 1 MEK--LVIATRRSQLALWQSEYVKSRLLEHY--PNMQIELQEFVTKGDKILDVPLAKIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E ++ G AVHS KD+PT+ GL ++A R D RD F+S+ SL++ Sbjct: 57 KGLFTKELEVAMLEGSAHLAVHSLKDVPTQFEDGLMLAAVTKRFDPRDAFLSNKYTSLEE 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT+SLRR+ L R DI + D RG I TR+ KLN + AI+LA GI++L Sbjct: 117 LPKGAIVGTTSLRRRMALKILRPDIELKDLRGNINTRIAKLNAGEYDAIILAATGIQKLG 176 Query: 181 KEKVIKEI--LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 E +K ++ + PS GQ + IET N+PK E++KV+N + ER+F+ Sbjct: 177 IENEVKYFSPISTDIMIPSMGQATLGIET-TNDPKVLEILKVLNDNNAHIESTVERSFVD 235 Query: 239 ELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 L G C+ I A +++ IV DG + + D IG++ AQ Sbjct: 236 TLQGGCQVPIGVKATILDENSIRVQAIVGMPDGSEYISEDITADIEDYETIGQNLAQ 292 >gi|329903547|ref|ZP_08273542.1| Porphobilinogen deaminase [Oxalobacteraceae bacterium IMCC9480] gi|327548285|gb|EGF32978.1| Porphobilinogen deaminase [Oxalobacteraceae bacterium IMCC9480] Length = 280 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 96/255 (37%), Positives = 143/255 (56%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 ++T+GD+I +RTL+++GGKGLF +E+E + G D AVHS KD+P +L G ++A+L Sbjct: 1 MTTRGDQILDRTLSKVGGKGLFVKELEVAIAEGRADLAVHSLKDVPMELPDGFMLAAFLE 60 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 RED RD F+S+ SL+ L +V+GTSSLRR+AL+ + + RG ++TRL KL+ Sbjct: 61 REDPRDAFVSNEYASLEALPAGAVVGTSSLRRQALIAARFPHLVIRPLRGNLDTRLGKLD 120 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 + AI+LA AG+KRL + I+ L E P+PGQGA+ IE L+ ++ Sbjct: 121 RGEYAAIILAAAGLKRLGVPERIRMALEPEHSLPAPGQGAMAIEIKAGRTDLAALLAPLD 180 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 H T +V ER GSC+ +A FA G L+ +V DG G Sbjct: 181 HLATARAVQAERTLSRAFGGSCQIPLAAFAVVDGDQLHLRAMVATPDGVRVASAEARGPA 240 Query: 283 CDAINIGRDAAQYIR 297 + +G+ A +R Sbjct: 241 DNPEAVGQQVADALR 255 >gi|168214449|ref|ZP_02640074.1| porphobilinogen deaminase [Clostridium perfringens CPE str. F4969] gi|170714079|gb|EDT26261.1| porphobilinogen deaminase [Clostridium perfringens CPE str. F4969] Length = 291 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 160/289 (55%), Gaps = 6/289 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LA + L + + ++++ T+GDR + +L +IGGKGLF +E Sbjct: 5 IATRKSKLAQVQTEKVMELLKEKENVDSKKLLVM---TEGDRRLDVSLNKIGGKGLFVKE 61 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L + I Sbjct: 62 IELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGARI 121 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSS+RR L +R D+ ++ RG I+TR+ K+ I+LA AG+KRL E+VI + Sbjct: 122 GTSSIRRAEQLKLFRDDLEIVPIRGNIQTRIKKITEENLDGIILAAAGLKRLGMEEVISD 181 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + + F P+ GQGA+ IE + + + K ++ ++ +V ER+F+ L+G C S Sbjct: 182 YFDPKVFLPAIGQGALGIEC-LKGGEFNDYFKALDSKEVRTTVEAERSFMKVLNGGCHSL 240 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I ++ K + LY G ++ + ++ GN+ D I +G+ A+ I Sbjct: 241 IGAYSEVKDNDLYMIGTFTVNNRIVKKDIL--GNKEDNILLGKKLAEKI 287 >gi|253680789|ref|ZP_04861592.1| hydroxymethylbilane synthase [Clostridium botulinum D str. 1873] gi|253562638|gb|EES92084.1| hydroxymethylbilane synthase [Clostridium botulinum D str. 1873] Length = 300 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 110/294 (37%), Positives = 160/294 (54%), Gaps = 8/294 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + P N I +STKGDRI + L +IGGKGLF +E Sbjct: 5 VGSRGSKLALTQTNWVIDKIKQNN--PQLNFEIKIISTKGDRIQHMLLDKIGGKGLFVQE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFI-SHTAQSLKDLALHS 125 IE++LISG+ID AVHS KDM T + + L+ S Y+P RED RDV I + +S+ +L + Sbjct: 63 IEEQLISGQIDLAVHSMKDMSTDIPEELKFS-YVPIREDYRDVLILNKKYKSIDELPKGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 IGT S RRK LL +R+D+ V+ RG ++TR+ K+ I+LA AGIKRL E K+ Sbjct: 122 KIGTGSKRRKYQLLDYRTDLKVVPIRGNVDTRIKKIETENLDGIVLASAGIKRLGLEDKI 181 Query: 185 IKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I +E PSP QG + +E + ++K I H+ + ERAFL ++G Sbjct: 182 DYNIFYLEKDIMLPSPAQGILALEIKRGRKDLENILKSIEHKASTIQAEAERAFLKGVNG 241 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C I +T+ G++ DG + G+ +A +G + A+ I Sbjct: 242 GCHVPIGALCNINKNTIEVTGLLGKEDGSKIIRKTLVGSIDEAEYVGYELAKII 295 >gi|161831110|ref|YP_001595911.1| porphobilinogen deaminase [Coxiella burnetii RSA 331] gi|189028089|sp|A9N910|HEM3_COXBR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|161762977|gb|ABX78619.1| porphobilinogen deaminase [Coxiella burnetii RSA 331] Length = 307 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 106/297 (35%), Positives = 159/297 (53%), Gaps = 6/297 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIG 59 ++K+ I TR SPLAL A + + + H PH I+ +T+GDR+T L + G Sbjct: 2 IKKRSILIVTRKSPLALWQAEFVKQQIENSH---PHLACQILGCTTQGDRLTTEKLVDSG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GK LF ++++K L++ + D AVHS KDM L + A++ RED RDV I L Sbjct: 59 GKDLFVKDLQKALLNRDADIAVHSIKDMSACDGPELMVGAFIRREDPRDVLI--VKGELS 116 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L H+VIGTSS RR+ L +++ + + RG + TRL KL+ AI+LA AG+KRL Sbjct: 117 TLPPHAVIGTSSPRRQCQLKKFQPGCKIKEIRGNVGTRLAKLDAGHYEAIVLAAAGLKRL 176 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E I + +F P+ GQGAI +E ++ + Q L+K ++H +T V ERA + Sbjct: 177 GLENRIHYYFDPHEFIPAIGQGAIGVECRSDDHEMQTLLKSLDHRETRLCVTAERAVNEK 236 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L G C + IA A K + ++ DG++ + GN +A IG A + Sbjct: 237 LGGDCFTPIAAHAIIKNDQFSLFAMLGKIDGRVIIRATEIGNSEEAKRIGFKVASQL 293 >gi|149194367|ref|ZP_01871464.1| Porphobilinogen deaminase [Caminibacter mediatlanticus TB-2] gi|149135542|gb|EDM24021.1| Porphobilinogen deaminase [Caminibacter mediatlanticus TB-2] Length = 295 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 101/247 (40%), Positives = 148/247 (59%), Gaps = 12/247 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A + L ++ H + + ++T GD+I ++ L IGGKGLF +E Sbjct: 5 IATRGSKLALWQAEWVKKRLENLG----HEVDLKIVTTTGDKILDKPLASIGGKGLFIKE 60 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKG-LQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 +E+ L+ GE AVHS KD PT+ K ++A RE + DVF+S T ++L +L ++V Sbjct: 61 VEEALLRGEAQIAVHSLKDFPTEYNKEHFTLAAVPKREAVEDVFLSETFETLAELPHNAV 120 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSS+RR L +R D+ + D RG ++TR+NKL + AI+LAYAG+KRL K +K Sbjct: 121 VGTSSIRRAMQLKAFREDLVISDLRGNVDTRINKLKKGEYDAIILAYAGVKRLNLIKEVK 180 Query: 187 --EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD--SVNCERAFLAELDG 242 EIL+ + P+ GQGA+ IET + + K E VK +N D W V ER F+ EL+ Sbjct: 181 YFEILDTDIMIPAMGQGALGIET-IKDEKVIEAVKPLN--DLWTKIEVTIERDFIDELNL 237 Query: 243 SCKSAIA 249 C + + Sbjct: 238 GCHAPVG 244 >gi|164687765|ref|ZP_02211793.1| hypothetical protein CLOBAR_01407 [Clostridium bartlettii DSM 16795] gi|164603539|gb|EDQ97004.1| hypothetical protein CLOBAR_01407 [Clostridium bartlettii DSM 16795] Length = 298 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 101/290 (34%), Positives = 153/290 (52%), Gaps = 3/290 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LAL L + + II TKGD I + L +IG KGLF +E Sbjct: 5 VGTRGSNLALVQTNWVVDQLKKENPGVEFEVKII--KTKGDLIKDLPLDKIGDKGLFVKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLALHSV 126 IEK L+ GEID AVHS KDMP+ L +GL+ + RED RD I +SL DL + Sbjct: 63 IEKSLLDGEIDMAVHSMKDMPSYLPEGLKFAHSPKREDPRDALIFKEGYKSLDDLPQGAR 122 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGT S RRK LL+ R D+ ++ RG IETR+ K+ K ++LA +G++R + I Sbjct: 123 IGTGSKRRKYQLLKHRPDLEIVPIRGNIETRIKKIETEKLDGVVLAASGLRRAGLDDKID 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + + P+P QG + +E ++ + ++++ I + T ++ ER FL ++GSC Sbjct: 183 YYIPTDIMLPAPAQGILALEIREDDKETEKIIDSIKDDITKIQIDAERGFLIGVNGSCHI 242 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + +G + G+ +GK S+ G DA IG + A+ + Sbjct: 243 PMGAYCEIEGEKITLTGLYGDGEGKKIVVQSQVGTLADAPKIGYELAKSV 292 >gi|257092424|ref|YP_003166065.1| porphobilinogen deaminase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044948|gb|ACV34136.1| porphobilinogen deaminase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 315 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 99/270 (36%), Positives = 146/270 (54%), Gaps = 4/270 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A L +++ P + I+ ++T+GD+I +R L IGGKGLF +E Sbjct: 13 IASRESRLAMWQAQHVSGRLTELY--PQTAVDILGMTTRGDQILDRPLAAIGGKGLFIKE 70 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E + G D AVHS KD+P ++ +G ++A RE+ D F+S+ L +L ++V+ Sbjct: 71 LEVAMQQGRADLAVHSMKDLPMEMPEGFALAAISVRENPCDAFVSNRFGGLAELPANAVV 130 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + + RG ++TRL KL+ AI+LA AG+ RL IK Sbjct: 131 GTSSLRREAMLRAGYPQLEIRSLRGNLDTRLRKLDAGDYDAIILAAAGLIRLGLTDRIKA 190 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L E P+PGQG + IE LV +N T V ERAF L GSC+ Sbjct: 191 VLTPEQSLPAPGQGVLGIEVLSARVDLLTLVAPLNDVATAHCVRAERAFSRALGGSCQIP 250 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277 +A A L+ G + DG+ H +S Sbjct: 251 LAAHAVLDSGALWLRGWIATPDGR--HSLS 278 >gi|209147746|gb|ACI32904.1| Porphobilinogen deaminase [Salmo salar] Length = 359 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 107/269 (39%), Positives = 143/269 (53%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA L ++ P +I I+ ++T GD+I + L++IG K LFT Sbjct: 19 IRIGTRNSQLARIQTDSVAEKLKGLY--PDVHIEIVGMTTTGDKILDTALSKIGEKSLFT 76 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A L RE+ D + H +SL L Sbjct: 77 KELETALERNEVDLVVHSLKDLPTTLPPGFTIGAVLKRENPHDAVVLHPQNMGKSLDTLP 136 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181 SVIGTSSLRR A L + + D RG + TRL KL+ AI+LA AG++R+ Sbjct: 137 DKSVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDEKGDFSAIILAAAGLRRMGW 196 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E + +IL ED + GQGAI IE + E+V V++ +T ERAFL L+ Sbjct: 197 ESRVSQILGPEDCMYAVGQGAIAIEVRAKDKDILEMVSVLHDPNTVLRCIAERAFLRRLE 256 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K S LY G V + DG Sbjct: 257 GGCSVPVAVHTEVKDSQLYLTGAVYSLDG 285 >gi|256827644|ref|YP_003151603.1| porphobilinogen deaminase [Cryptobacterium curtum DSM 15641] gi|256583787|gb|ACU94921.1| porphobilinogen deaminase [Cryptobacterium curtum DSM 15641] Length = 313 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 95/253 (37%), Positives = 142/253 (56%), Gaps = 3/253 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K IGTR S LAL A + R+ + P + + + TKGD+I + L++IG Sbjct: 1 MTDKTITIGTRGSKLALWQAEKVRALIQ--ATFPEVHCAVKVIRTKGDKILDVALSKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLK 119 KGLFT+E+E+ L+ GE+D VHS KDMPT L KGL I+ R DV + S +L Sbjct: 59 KGLFTKELERCLLEGEVDVCVHSMKDMPTVLPKGLFIAGVTERAYPNDVIVASAKGLTLS 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL + + T SLRR A L R R D++ + RG I+TR+ ++ + A +LA AG+ RL Sbjct: 119 DLPAGARVATGSLRRVAQLARLRPDVTACEIRGNIDTRIGRVLAGEFDAAILAAAGLYRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E+ I ++ E+ P+ GQGAI +E ++ + L I+H+ T +V ER + Sbjct: 179 GLEEQISSLIPTEEMIPAVGQGAIALEARADDREVAHLCTAISHQPTLRAVEAERYIMRA 238 Query: 240 LDGSCKSAIAGFA 252 L+G C+ + +A Sbjct: 239 LEGGCQVPMGAYA 251 >gi|93004929|ref|YP_579366.1| porphobilinogen deaminase [Psychrobacter cryohalolentis K5] gi|92392607|gb|ABE73882.1| hydroxymethylbilane synthase [Psychrobacter cryohalolentis K5] Length = 345 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 92/250 (36%), Positives = 145/250 (58%), Gaps = 2/250 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR SPLAL A R+ L+ ++ P I ++ + TKGD+I + L +IGGKGLF Sbjct: 12 LNIATRQSPLALWQAEHIRNRLLALY--PEMTINLLKIVTKGDKILDTPLAKIGGKGLFV 69 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L + D AVHS KD+P L +GL + Y R D F+S+T S+ +L + Sbjct: 70 KELEQALYDKQADIAVHSLKDVPMDLPEGLTLGVYCKRASPTDAFVSNTYHSIAELPQGA 129 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GT+SLRR+ + +R D+ + RG + TRL+KL+ + AI+LA +G+KR++ + I Sbjct: 130 VVGTASLRRQCQIKAYRPDLQIKTLRGNVGTRLSKLDAGEYDAIILATSGLKRIELDARI 189 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L+I P+ GQGA+ IE ++ +L+ +N + + ERA L G C+ Sbjct: 190 RSELDINICLPAVGQGALAIECREDDADVLKLLAPLNDDKARIRLIAERALNRHLQGGCQ 249 Query: 246 SAIAGFAYCK 255 IA +A + Sbjct: 250 VPIAAYAVLQ 259 >gi|325981153|ref|YP_004293555.1| porphobilinogen deaminase [Nitrosomonas sp. AL212] gi|325530672|gb|ADZ25393.1| porphobilinogen deaminase [Nitrosomonas sp. AL212] Length = 318 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 107/289 (37%), Positives = 163/289 (56%), Gaps = 2/289 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A + L +++ P I I+ ++T+GD+I +++L++IGGKGLF +E Sbjct: 13 IASRESLLAMWQAKFIQKCLSELY--PQTEISILGMTTRGDQILDQSLSKIGGKGLFIKE 70 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L G D AVHS KDMP + +G +++A RED RD F+S+ SL L S++ Sbjct: 71 LEQALEDGRADIAVHSMKDMPMNVPEGFKLAAITEREDPRDAFVSNHHASLDVLPAGSIV 130 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR++ L + V RG ++TRL KL+ ++ AI+LA AG+KRL+ I Sbjct: 131 GTSSLRRESQLRAHFPLLQVQPLRGNVQTRLRKLDEDQYAAIILAAAGLKRLELSNRITA 190 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +LN E P+ GQGA+ IE + +L++ ++H+ T V ER+ L GSC+ Sbjct: 191 LLNPEQSLPAVGQGALGIECRADRMDLIQLMQPLHHQATAYCVEAERSMSRVLGGSCQVP 250 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + FA L G V DGK + G I +G+ AQ + Sbjct: 251 LGAFAEIDNDKLRLRGFVAQPDGKRIVSGALEGKPETGIAMGQQLAQKL 299 >gi|315635705|ref|ZP_07890968.1| hydroxymethylbilane synthase [Arcobacter butzleri JV22] gi|315480002|gb|EFU70672.1| hydroxymethylbilane synthase [Arcobacter butzleri JV22] Length = 312 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 110/297 (37%), Positives = 162/297 (54%), Gaps = 8/297 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK I TR S LAL + ++ L++ + P I + TKGD+I + L +IGG Sbjct: 1 MEK--LVIATRRSQLALWQSEYVKARLLEHY--PNMQIELQEFVTKGDKILDVPLAKIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E ++ G AVHS KD+PT+ GL ++A R D RD F+S+ SL++ Sbjct: 57 KGLFTKELEVAMLEGSAHLAVHSLKDVPTQFEDGLMLAAVTKRFDPRDAFLSNKYTSLEE 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT+SLRR+ L R DI + D RG I TR+ KLN + AI+LA GI++L Sbjct: 117 LPKGAVVGTTSLRRRMALKILRPDIELKDLRGNINTRIAKLNAGEYDAIILAATGIQKLG 176 Query: 181 KEKVIKEI--LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 E +K ++ + PS GQ + IET N+PK E++KV+N + ER+F+ Sbjct: 177 IENEVKYFSPISTDVMIPSMGQATLGIET-TNDPKVLEILKVLNDNNAHIESTIERSFVD 235 Query: 239 ELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 L G C+ I A +++ IV DG + + D IG++ AQ Sbjct: 236 TLQGGCQVPIGVKATILDENSIRVQAIVGMPDGSEYISEDITADIEDYETIGQNLAQ 292 >gi|296534852|ref|ZP_06897187.1| hydroxymethylbilane synthase [Roseomonas cervicalis ATCC 49957] gi|296264818|gb|EFH11108.1| hydroxymethylbilane synthase [Roseomonas cervicalis ATCC 49957] Length = 304 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 114/309 (36%), Positives = 155/309 (50%), Gaps = 14/309 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R G+R SPLAL R + M + + + +PLST GD R L E+GGKGLF Sbjct: 1 PLRAGSRASPLAL------RQTAMVLAALGETPCLTVPLSTSGDAEPRRRLAELGGKGLF 54 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-------SHTAQS 117 +EI + L+ G ID AVHS KD+ T+L GL I+A LPRED RD + A Sbjct: 55 AKEIHEALLDGRIDFAVHSLKDLETELPPGLVIAACLPREDARDALLLAPACPPEERALP 114 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L + + IGT+S RR A L R D+ RG ++TRL++L A LLA AG+K Sbjct: 115 LGFLPVGARIGTASARRAAQLRHLRPDLRFGLLRGNVQTRLHRLEQGDFAATLLAMAGLK 174 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL IL+ E+ P+ GQG I I N +E + I+H T + ERA L Sbjct: 175 RLDLAARASRILSPEEMLPAAGQGVIAITARAGNEALREKLAGIDHAATRLAAAAERALL 234 Query: 238 AELDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 A L+GSC++ + A L+ G+V DG +G +A IG + Sbjct: 235 AALEGSCRTPVGAHATLDAEGRLHLTGLVAREDGTFLLRRRLSGPASEAARIGATLGAEL 294 Query: 297 RFISNKNVF 305 R S ++ Sbjct: 295 RADSPADLL 303 >gi|161486849|ref|NP_781392.2| porphobilinogen deaminase [Clostridium tetani E88] Length = 290 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 104/268 (38%), Positives = 148/268 (55%), Gaps = 11/268 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVI---IPLSTKGDRITNRTLTEIGGKGLF 64 + TR S LA +T++ L+ + KI N V + + T GD+I +RTL +IGGKGLF Sbjct: 5 VATRRSILA-----QTQTDLV-IKKIEEDNEVKCEKLLIQTLGDKILDRTLDKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIEK L+ G+ AVHS KD+P ++ I A RED+RD F+S +L Sbjct: 59 IKEIEKALLDGKAHMAVHSMKDVPYEVPSMFYIGAIPRREDVRDAFVSRDGTKFMELPSG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S IGTSS RR + + R D+ V+ RG ++TRL K+ +LA AG+KRL E+V Sbjct: 119 SKIGTSSRRRSSQIKILRPDVEVVPIRGNVQTRLRKIEEMNLAGTILAVAGLKRLNMEEV 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + + E+ P+ GQGA+ IE + +K I+HE+T V ER+F+ L G C Sbjct: 179 ITDYFSPEEMVPAIGQGALGIEIK-KYEDVIDYIKGIDHEETRICVEGERSFMEALKGDC 237 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKI 272 S I A + +Y GI +GKI Sbjct: 238 HSTIGAHAIVENDLMYMTGI-FEVNGKI 264 >gi|182626954|ref|ZP_02954686.1| porphobilinogen deaminase [Clostridium perfringens D str. JGS1721] gi|177907690|gb|EDT70308.1| porphobilinogen deaminase [Clostridium perfringens D str. JGS1721] Length = 291 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 98/289 (33%), Positives = 160/289 (55%), Gaps = 6/289 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LA + L + + ++++ T+GDR + +L +IGGKGLF +E Sbjct: 5 IATRKSKLAQVQTEKVMELLKEKENVDSKKLLVM---TEGDRRLDVSLNKIGGKGLFVKE 61 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L + I Sbjct: 62 IELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGARI 121 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI + Sbjct: 122 GTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVISD 181 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + + F P+ GQGA+ IE + + + K ++ ++ +V+ ER+F+ L+G C S Sbjct: 182 YFDPKVFLPAIGQGALGIEC-LKGGEFNDYFKALDSKEVRTTVDAERSFMKVLNGGCHSL 240 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I ++ K + LY G ++ + ++ GN+ D I +G+ A+ I Sbjct: 241 IGAYSEVKDNDLYMIGTFTVNNRIVKKDIL--GNKEDNILLGKKLAEKI 287 >gi|56476047|ref|YP_157636.1| porphobilinogen deaminase [Aromatoleum aromaticum EbN1] gi|56312090|emb|CAI06735.1| Porphobilinogen deaminase [Aromatoleum aromaticum EbN1] Length = 314 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 101/298 (33%), Positives = 153/298 (51%), Gaps = 2/298 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A ++ L ++ P + ++ ++T+GD+I +R L ++GGKGLF +E Sbjct: 15 IATRESRLALWQAEHVKARLEALY--PGCRVELLGMTTRGDQILDRPLAKVGGKGLFVKE 72 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L+ D AVHS KD+P +L + + RE D F+S SL D+ +V+ Sbjct: 73 LEAALLEERADIAVHSMKDVPMQLAEPFALPCISAREVPLDAFVSPRYASLADMPPGTVV 132 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR++ L ++V RG ++TRL KL+ + AI+LA AG++RL I+ Sbjct: 133 GTSSLRRESQLHAQFPFLAVTSLRGNLDTRLRKLDEGQYDAIILAAAGLRRLGLADRIRA 192 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 L E P+ GQGA+ IE + +N DT V ERA L GSC+ Sbjct: 193 ELPSEVSLPAAGQGALGIECLAKRTDIAAWLAPLNDADTSACVRAERAVARALAGSCEVP 252 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + +A + L+ G V DG R G+ DA +G A +R +++ Sbjct: 253 LGAYAEIRAGRLWLRGFVALPDGSRMVRAEREGDAADAEGLGLALADDLRAQGAEDIL 310 >gi|257470630|ref|ZP_05634720.1| porphobilinogen deaminase [Fusobacterium ulcerans ATCC 49185] Length = 306 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 101/259 (38%), Positives = 143/259 (55%), Gaps = 4/259 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGGKGLFT 65 IG+R S LA+A + + L + P I + T GD ++N ++ K FT Sbjct: 14 IGSRGSILAMAQSEMIKKMLE--NNFPELEFEIKKIVTSGDTDLVSNWNNSDKSLKSFFT 71 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE +L++G ID AVHS KDMP +GL A RED RDV +S + ++L +L + Sbjct: 72 KEIEVELLNGTIDLAVHSMKDMPVVSPEGLICGAVPDREDSRDVLVSKSGKTLMELPAGA 131 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR L RSD+ + RG I TRLNKL N AILLA AG+KR+ EK I Sbjct: 132 IVGTSSLRRTMNLKNLRSDLEIKQLRGNIHTRLNKLKNEDYDAILLAAAGLKRVGLEKEI 191 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ E F P+P QG + I+ N+ + ++++K I++ED V ER F DG C Sbjct: 192 TEYLDPEKFLPAPAQGVLHIQCRENDDEVKKILKSIHNEDIEKVVVIEREFSKIFDGGCH 251 Query: 246 SAIAGFAYCKGSTLYFYGI 264 + + G + GI Sbjct: 252 TPMGCHCILDGDKITLTGI 270 >gi|238916686|ref|YP_002930203.1| hydroxymethylbilane synthase [Eubacterium eligens ATCC 27750] gi|259647796|sp|C4Z552|HEM3_EUBE2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238872046|gb|ACR71756.1| hydroxymethylbilane synthase [Eubacterium eligens ATCC 27750] Length = 295 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 95/251 (37%), Positives = 137/251 (54%), Gaps = 6/251 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +RIGTR S LAL + + + + + P ++ + T GD++T++ L IG KG F Sbjct: 3 YRIGTRGSKLALVQSEYVKRRMEEAY--PEDTFELVIIKTTGDKVTDKPLAAIGTKGFFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+SG ID AVHS KDMP + GL + RED RDV I TA S +L + Sbjct: 61 KEIEEALLSGSIDMAVHSMKDMPAECAAGLTFAKAWKREDCRDVLILKTAGSFSELPSGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGIKRLKKEK 183 VIGT SLRR L R DI RG ++TR+NKL ++ I+LA AG+ RL + Sbjct: 121 VIGTGSLRRACQLAMLRPDIQFTAIRGNVDTRINKLMDDSYGLDGIVLAAAGLNRLGRSS 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I E L+ E P+P QG + IET N + + + ++ +++ ER FL G Sbjct: 181 EITEYLDPEVVIPAPAQGVLAIETAEVNTELLDKINALSDDNSDREAVAERTFLRLTGGG 240 Query: 244 CKSAIAGFAYC 254 C + + A+C Sbjct: 241 CHAPVG--AHC 249 >gi|284006594|emb|CBA71855.1| porphobilinogen deaminase [Arsenophonus nasoniae] Length = 297 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 97/273 (35%), Positives = 141/273 (51%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P I +IP+ST+GD + + L +IGGKGLF +E+E L+ D AVHS KD+P Sbjct: 16 PTLTIELIPMSTQGDILLDTPLAKIGGKGLFVKELENALLENRADIAVHSIKDIPATFPN 75 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 L + A R D RD F+S+ SL L S+IGTSSLRR+ L + + D RG Sbjct: 76 NLGLMAICQRGDPRDAFVSNQYDSLDALPAGSIIGTSSLRRQCQLRHTYPHLVIQDLRGN 135 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + I+LA AG+KRL E I+ L E P+ GQGAI IE +++ Sbjct: 136 VGTRLSKLDNGQYDGIILAVAGLKRLNLETRIRMPLPPEHSLPAVGQGAIGIECRLDDHH 195 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 Q + ++H DT + ER L G C+ I +A + ++ +V DG Sbjct: 196 TQHFLAPLHHHDTAICIQAERTVNNRLQGGCQVPIGSYAIWQNKQIWLRALVGTPDGSQI 255 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 R+ DA + + A+ + K + N Sbjct: 256 IRGERSFKPEDAQQMSIELAEELLNNGAKQILN 288 >gi|291612739|ref|YP_003522896.1| porphobilinogen deaminase [Sideroxydans lithotrophicus ES-1] gi|291582851|gb|ADE10509.1| porphobilinogen deaminase [Sideroxydans lithotrophicus ES-1] Length = 314 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 101/263 (38%), Positives = 154/263 (58%), Gaps = 2/263 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R L ++ P ++ I+ ++T+GD+I + TL++IGGKGLF +E Sbjct: 14 IASRESALAMWQAEHIRDRLRALY--PQTSVSILGMTTQGDQILDVTLSKIGGKGLFVKE 71 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L +G D AVHS KD+P L +G ++ RED RD F+S+ +L L SV+ Sbjct: 72 LETALENGSADIAVHSLKDVPMNLPEGFALACIGEREDPRDAFVSNRFDNLAALPAGSVV 131 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+KRL + I+ Sbjct: 132 GTSSLRRESQLRARFPHLKIEPLRGNVQTRLRKLDEGQYAAIILAAAGLKRLGLGERIRA 191 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +++ ++ P+ GQGA+ IET + P + ++ ++H DT V ERA L GSC+ Sbjct: 192 VISSDESLPAVGQGALGIETRADRPDLKAVLAPLHHADTAACVLAERAMSRALAGSCQVP 251 Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270 + GFA + L G V DG Sbjct: 252 LGGFAEVQNGKLRMRGFVATPDG 274 >gi|269128634|ref|YP_003302004.1| porphobilinogen deaminase [Thermomonospora curvata DSM 43183] gi|268313592|gb|ACY99966.1| porphobilinogen deaminase [Thermomonospora curvata DSM 43183] Length = 311 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 161/298 (54%), Gaps = 13/298 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S +A ++R ++ ++ H + ++ ++T+GD I+ L ++GG G+F Sbjct: 4 LRLGTRKSLMA---TTQSRRVGDELTRLTGHAVELVGVTTEGD-ISRAHLAQMGGTGVFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + KLISGE+D AVHS KD+PT +G+ ++A R+D RD L DL + Sbjct: 60 SALRDKLISGEVDFAVHSLKDLPTAPAEGITLAAVYRRDDPRDALCGPL--KLADLPRGA 117 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT S RR A L R D+ ++ RG +TRL K+ + + A++LAYAG+ R+ + + Sbjct: 118 RVGTGSPRRVAQLRALRGDLEIVPIRGNADTRLRKVADGELDAVVLAYAGLGRIGRRDAV 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+ + D P+PGQGA+ +E + EL+ ++H T +V ER LA L+ C Sbjct: 178 VEVFDPADMLPAPGQGALALECRSDRLDLIELLATVDHAPTRAAVTAERTVLAVLEAGCS 237 Query: 246 SAIAGFAYCKGS------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD-AAQYI 296 + + +A + S +L+ V DG +S +G+ A IGR+ AAQ + Sbjct: 238 APVGAYATVEDSAEEEQPSLHLSACVAGIDGARQVRLSGSGHPERAEEIGRELAAQLL 295 >gi|311895732|dbj|BAJ28140.1| putative porphobilinogen deaminase [Kitasatospora setae KM-6054] Length = 323 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 108/307 (35%), Positives = 169/307 (55%), Gaps = 17/307 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIGTR SPLALA ++L + +P +P++T+ D + L ++GGKGL Sbjct: 9 RTLRIGTRSSPLALAQTDMVVAALRE--HVPDLVAETVPVTTEAD-LWQGDLAQLGGKGL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMP--TKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118 +T++I+ L +G +D AVH KD+P L +GL +AY+ R D+RDV + ++L Sbjct: 66 YTKQIDAMLQAGAVDMAVHCVKDVPGDVPLPRGLVFAAYMERPDVRDVLLFPEGSGYRTL 125 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-----AHAILLAY 173 DL +VI +S++RRKA +LR R D+ V+ RG + +RL KL+ K A ++LA Sbjct: 126 ADLPPGAVILSSAVRRKAQILRARPDLEVVRVRGAVGSRLEKLDGAKQIDVHADGMVLAA 185 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG+ RL E+ +L++++ P+ G G + +E +P L++ INH T V E Sbjct: 186 AGLARLGIERP-GYVLSMDEMLPAVGAGVLGLECRQGDPATAALLEKINHPRTQREVTAE 244 Query: 234 RAFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIF-HEVSRNGNRCDAINIG-R 290 R L L G C S IAG+ + L G+V +G F + + N +R D +G R Sbjct: 245 RVLLHNLRGHCNSPIAGYCTTEPDGQLSLRGMVFDREGSKFANAMLWNEHRQDPATLGAR 304 Query: 291 DAAQYIR 297 AA+ +R Sbjct: 305 VAAELLR 311 >gi|91773206|ref|YP_565898.1| porphobilinogen deaminase [Methanococcoides burtonii DSM 6242] gi|121684353|sp|Q12WM8|HEM3_METBU RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|91712221|gb|ABE52148.1| porphobilinogen deaminase [Methanococcoides burtonii DSM 6242] Length = 309 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 157/289 (54%), Gaps = 12/289 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LA+A A L + N++ T GD T+R L E+ G G+F E Sbjct: 3 LGTRGSALAIAQADLVTKMLEEKGHELTRNVI----KTSGDVFTDRPLHEVAGVGVFVRE 58 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 ++ ++I GE+D AVHS KD+PT L I+A L R+ DV ++ +L +L ++I Sbjct: 59 LDDRMIEGEVDIAVHSMKDLPTVRPPELAIAAVLKRDSPYDVLLTADGSTLDELPDGAII 118 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+S+RR+A LLR+R D++V D RG I TR+ KL + ILLA AG++R+ + ++ Sbjct: 119 GTTSMRRRAQLLRYRPDLNVEDLRGNINTRIQKLKAGQYDGILLAEAGLQRMGWDMDVQR 178 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 L E F PS QG I + T ++ +A+ V+NHE + ER + +++G C Sbjct: 179 -LPAEAFCPSANQGTIVVVTRADD-EAERACSVLNHERSRMETEVERLLITDVEGGCIVP 236 Query: 248 IAGFAYC--KGSTLYFYGIVLASDG----KIFHEVSRNGNRCDAINIGR 290 I FA G ++ VLA DG +I ++ R A++IGR Sbjct: 237 IGSFAQMNEDGDEIHVLVEVLAVDGTREIRIEDDIPVKNYREHALSIGR 285 >gi|16330297|ref|NP_441025.1| porphobilinogen deaminase [Synechocystis sp. PCC 6803] gi|2495177|sp|P73660|HEM3_SYNY3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|1652786|dbj|BAA17705.1| porphobilinogen deaminase [Synechocystis sp. PCC 6803] Length = 320 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 103/295 (34%), Positives = 156/295 (52%), Gaps = 5/295 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LAL + + L P + + T+GD+I + L +IG KGLFT Sbjct: 10 VRIGSRKSQLALVQTYWVQEELQ--KHFPDRQFDVETMETQGDKILDVALAKIGDKGLFT 67 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122 +E+E ++ D AVHS KD+PT L GL + R + D + H + L L Sbjct: 68 QELEDGMLGKRTDLAVHSLKDLPTNLPAGLMLGCVTKRVNPADALVLNAKHQGKDLASLP 127 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR A L ++ D RG + TRL KL++N+ AI+LA AG++RL Sbjct: 128 EGAVIGTSSLRRLAQLRYHFPHLTFKDVRGNVNTRLAKLDSNEYDAIILAAAGLERLDMA 187 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I +++ E + GQGA+ IE + + L+KV+ E++ D ERAFL +L+G Sbjct: 188 NRIDQLIPPEISLHAVGQGALGIECREGDQEILSLLKVLEDENSRDRCLAERAFLRQLEG 247 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C+ I + G L G+V + DG+ + + + R +A +G+D A +R Sbjct: 248 GCQVPIGVNTHLDGDNLTLTGMVASLDGQRLIKDTLSAPRKEAEKLGQDLALKLR 302 >gi|239814381|ref|YP_002943291.1| porphobilinogen deaminase [Variovorax paradoxus S110] gi|239800958|gb|ACS18025.1| porphobilinogen deaminase [Variovorax paradoxus S110] Length = 308 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 93/248 (37%), Positives = 139/248 (56%), Gaps = 4/248 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A ++ L + H + ++ ++T+GD+I +++L+++GGKGLF +E Sbjct: 13 IATRESRLALWQAEHVQALLQERG----HAVSLLGMTTRGDQILDKSLSKVGGKGLFVKE 68 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L +G ++ L RED RD +S SL +L +V+ Sbjct: 69 LELALEEGRADIAVHSLKDVPMDLPEGFVLACVLEREDPRDALVSPRHASLDELPQGAVV 128 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR LL R D+ + RG ++TRL KL+ AI+LA AG+KRL E I+ Sbjct: 129 GTSSLRRVVLLRALRPDLRIEPLRGNLDTRLRKLDQGHYDAIVLAAAGLKRLGLEHRIRV 188 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + + P+ GQGA+ IE + L+ ++H W + ERA + GSC Sbjct: 189 AFDPDTMLPAAGQGALGIEVRADRTDLIALLAALSHSRDWLATAAERAVSRSMGGSCSMP 248 Query: 248 IAGFAYCK 255 +A A + Sbjct: 249 LAAHARWQ 256 >gi|302870086|ref|YP_003838723.1| porphobilinogen deaminase [Micromonospora aurantiaca ATCC 27029] gi|315503637|ref|YP_004082524.1| porphobilinogen deaminase [Micromonospora sp. L5] gi|302572945|gb|ADL49147.1| porphobilinogen deaminase [Micromonospora aurantiaca ATCC 27029] gi|315410256|gb|ADU08373.1| porphobilinogen deaminase [Micromonospora sp. L5] Length = 328 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 97/314 (30%), Positives = 157/314 (50%), Gaps = 17/314 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + +L P + ++ + T GDR T + G G+F Sbjct: 4 PLRLGTRGSALAMAQSGHVAEALTAATGRP---VELVEVVTAGDRSTAPV--QRLGVGVF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L +GEID AVHS KD+PT GL ++A PR+D RD ++ ++L +L Sbjct: 59 VSALRDALTAGEIDFAVHSYKDLPTAAAPGLHVAAVPPRQDPRDALVATNGRTLAELPPG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLKKE 182 + +GT +LRR A L + V RG ++TRL ++ A A++LA AG+ R+ + Sbjct: 119 ARVGTGALRRIAQLHALGMQLEVSPIRGNVDTRLGRVLGPDADLDAVVLARAGLNRIGRA 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+P QGA+ +E ++ EL+ +++H + ++ ERA LA L+ Sbjct: 179 DVITETLDPMLMLPAPAQGALAVECRADDQDVIELLALLDHAPSRAAITAERALLATLEA 238 Query: 243 SCKSAIAGFAYCK----------GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292 C + +A +A +Y G V++ DG +SR G DA IG+ Sbjct: 239 GCSAPVAAYAVLAEGEPTDEGDVNQEIYLRGAVISPDGTRDLRLSRTGTPADAAEIGKAL 298 Query: 293 AQYIRFISNKNVFN 306 A + + ++ Sbjct: 299 AAELLELGADSILG 312 >gi|320006816|gb|ADW01666.1| porphobilinogen deaminase [Streptomyces flavogriseus ATCC 33331] Length = 311 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 145/291 (49%), Gaps = 6/291 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT Sbjct: 7 IRIVSRDSPMALAQVERVRAGLAALH--PDTVTEVVPVRTTGDKWLG-DLSKVEGKGAFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +A+L R+DIRD + +L+ L Sbjct: 64 KEVDAALLAGEADLAVHCVKDIPADRPLPAGTTFAAFLERDDIRDALVHPDGLTLEQLPE 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSS+RR A L + + FRG RL KL +A A+LLA AG+ R+ + Sbjct: 124 GTRIGTSSVRRTAQLASSHPHLDCVPFRGNANRRLAKLAAGEADALLLAVAGLHRIGRPD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI +IL E P G G + ++ ++ E V +NH T+ + ER FL L G Sbjct: 184 VISDILAPETMCPPIGAGVLALQCREDDTATIEAVGALNHPGTYREITAERMFLHVLQGH 243 Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 C S IAG+A + L V DGK D +G A Sbjct: 244 CNSPIAGYATAHRNGDLSLRACVFTPDGKTVLNAHEWAGPLDPATLGTSVA 294 >gi|78185247|ref|YP_377682.1| porphobilinogen deaminase [Synechococcus sp. CC9902] gi|123770934|sp|Q3AWQ4|HEM3_SYNS9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78169541|gb|ABB26638.1| hydroxymethylbilane synthase [Synechococcus sp. CC9902] Length = 317 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 105/308 (34%), Positives = 155/308 (50%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLTITVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---S 117 KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + H + Sbjct: 59 KGLFTKELEAQMLVGRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVLHAKNKHLN 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L +V+GTSSLRR A L + D RG + TRL KL++ ++LA AG+ Sbjct: 119 LATLPEGAVVGTSSLRRLAQLRHHYPHLEFKDVRGNVITRLEKLDSGAYDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I + + + + GQGA+ IE N P E++KV+ H T ERAFL Sbjct: 179 RLGFADRIDQSIPGDISLHAVGQGALGIECVENQPDVMEIIKVLEHGPTSQRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I +G L G+V + DGK +G D +IG + A ++ Sbjct: 239 RELEGGCQVPIGVNTRFEGDQLILTGMVASLDGKRLIREQASGPSTDPESIGLELAATLK 298 Query: 298 FISNKNVF 305 + + Sbjct: 299 GLGAGEIL 306 >gi|113478006|ref|YP_724067.1| porphobilinogen deaminase [Trichodesmium erythraeum IMS101] gi|110169054|gb|ABG53594.1| hydroxymethylbilane synthase [Trichodesmium erythraeum IMS101] Length = 320 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 110/297 (37%), Positives = 153/297 (51%), Gaps = 9/297 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LAL + + L P + +ST+GD+I + L +IG KGLFT Sbjct: 10 IRIGSRKSQLALIQTYWVQEKLE--KNFPNITFEVHKMSTQGDKILDVALAKIGDKGLFT 67 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ E D AVHS KD+PT L +GL + RE+ D + H + LKD L + Sbjct: 68 KELELGMLQNETDLAVHSLKDLPTNLPEGLILGCVTERENPADALVLH--EKLKDKQLET 125 Query: 126 -----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 VIGTSSLRR A L + D RG + TRL KL+ + A++LA+AG+ RL Sbjct: 126 LPEGAVIGTSSLRRLAQLRYHFPHLEFKDVRGNLNTRLAKLDAGEYDALILAFAGLHRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +I+ E + GQGA+ IE + L+K + H T ERAFL EL Sbjct: 186 MSDRIHQIIPPEISLHAVGQGALGIECRAGDNNILNLLKSLEHTATAQRCYAERAFLREL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +G C+ I +G L G+V + DGK + G DA IG + AQ +R Sbjct: 246 EGGCQVPIGVNTQIEGEQLTLTGLVASLDGKKLVKDIVTGATADAEQIGIELAQKLR 302 >gi|255322661|ref|ZP_05363805.1| porphobilinogen deaminase [Campylobacter showae RM3277] gi|255300222|gb|EET79495.1| porphobilinogen deaminase [Campylobacter showae RM3277] Length = 311 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 98/272 (36%), Positives = 146/272 (53%), Gaps = 7/272 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK +I TR S LA+ + R ++ + P + + + TKGD I + L +IGG Sbjct: 1 MEK--LKIATRKSVLAMWQSEHIRDKIL--SRYPQIAVELTGMKTKGDVILDTPLAKIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E ++SGE AVHS KD+P +GL ++A RED+RD +S +D Sbjct: 57 KGLFTKELEDSMLSGETHIAVHSLKDVPVVFPEGLVLAAICSREDVRDAMLSEKYAKFED 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRRK LL R D+ +I RG ++TRL KL + AI+LA AG+ RL Sbjct: 117 LPEGARVGTTSLRRKMQLLAMRPDLEIISLRGNVQTRLRKLKEGEFDAIILAMAGVNRLN 176 Query: 181 KEKVIKEIL--NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + I+ ++ P+ GQGA+ IE + + L++ + E ER F+A Sbjct: 177 LRSEVAHIVPFELDQMVPAMGQGALGIEAR-EDSEILNLIEFLKDEKAVIETTVERDFVA 235 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 L+G C+ I A G + +V DG Sbjct: 236 MLEGGCQVPIGVNANLNGDKIEIRAVVGLPDG 267 >gi|238028332|ref|YP_002912563.1| Porphobilinogen deaminase [Burkholderia glumae BGR1] gi|237877526|gb|ACR29859.1| Porphobilinogen deaminase [Burkholderia glumae BGR1] Length = 322 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 100/258 (38%), Positives = 149/258 (57%), Gaps = 2/258 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL +L S++ Sbjct: 74 LETALADGRADLAVHSLKDVPMSLPEGFALTAVMRREDPRDAFVSNDYASLDELPTGSIV 133 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L DI V RG ++TRL KL+ AI+LA AG+KRL + I+ Sbjct: 134 GTSSLRREAMLRARYLDIDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLDARIRS 193 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 ++ +E PP+ GQGA+ IE + + ++ T + ER L GSC+ Sbjct: 194 LIEVEASPPAAGQGALGIEIAAARAELARWLAPLHDPATALACEAERMVSRALGGSCEVP 253 Query: 248 IAGFAYCKGSTLYFYGIV 265 +A A G L G V Sbjct: 254 LAAHAVWDGDVLQLTGRV 271 >gi|78778881|ref|YP_396993.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9312] gi|123741491|sp|Q31C38|HEM3_PROM9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78712380|gb|ABB49557.1| hydroxymethylbilane synthase [Prochlorococcus marinus str. MIT 9312] Length = 316 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 102/296 (34%), Positives = 159/296 (53%), Gaps = 5/296 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +I +R S LA+ + L IP + I ++T+GD+I + L +IG KGLFT Sbjct: 6 LKIASRRSKLAMVQTLWVKDQLE--KNIPNLEVSIEAMATQGDKILDVALAKIGDKGLFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122 +E+E +++ G+ D AVHS KD+PT L GL++ RED D + + L+ L Sbjct: 64 KELEAQMLVGQADIAVHSLKDLPTNLPSGLKLGCITKREDPADALVVSKKNDCYKLETLP 123 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S++GTSSLRR A L ++ D RG + TR+ KL+ + I+LA AG+KRL E Sbjct: 124 AGSIVGTSSLRRLAQLRNKYPHLNFKDIRGNVITRIEKLDAGEFDCIILAAAGLKRLGFE 183 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I +I+ E + GQGA+ IE ++ K E++ V+ + T ERAFL EL+G Sbjct: 184 SRIHQIIPNEISLHAVGQGALGIECKSDDKKVLEIISVLEDKPTSQRCLAERAFLRELEG 243 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C+ I + + LY G+V + DG+ + GN D +G++ A+ ++ Sbjct: 244 GCQVPIGVNSSIQNEQLYLTGMVASLDGERLIKDQYIGNIDDPEQVGKELAKKLKL 299 >gi|110800724|ref|YP_696126.1| porphobilinogen deaminase [Clostridium perfringens ATCC 13124] gi|169347253|ref|ZP_02866192.1| porphobilinogen deaminase [Clostridium perfringens C str. JGS1495] gi|123344731|sp|Q0TQG4|HEM3_CLOP1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|4239996|dbj|BAA74781.1| hydroxymethylbilane synthase [Clostridium perfringens] gi|110675371|gb|ABG84358.1| porphobilinogen deaminase [Clostridium perfringens ATCC 13124] gi|169296649|gb|EDS78780.1| porphobilinogen deaminase [Clostridium perfringens C str. JGS1495] Length = 291 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 98/289 (33%), Positives = 159/289 (55%), Gaps = 6/289 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LA + L + + ++++ T+GDR + +L +IGGKGLF +E Sbjct: 5 IATRKSKLAQVQTEKVMELLKEKENVDSKKLLVM---TEGDRRLDVSLNKIGGKGLFVKE 61 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L + I Sbjct: 62 IELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGARI 121 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI + Sbjct: 122 GTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVISD 181 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + + F P+ GQGA+ IE + + + K ++ ++ +V ER+F+ L+G C S Sbjct: 182 YFDPKVFLPAIGQGALGIEC-LKGGEFNDYFKALDSKEVRTTVEAERSFMKVLNGGCHSL 240 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I ++ K + LY G ++ + ++ GN+ D I +G+ A+ I Sbjct: 241 IGAYSEVKDNDLYMIGTFTVNNRIVKKDIL--GNKEDNILLGKKLAEKI 287 >gi|223040967|ref|ZP_03611228.1| porphobilinogen deaminase [Campylobacter rectus RM3267] gi|222877764|gb|EEF12884.1| porphobilinogen deaminase [Campylobacter rectus RM3267] Length = 309 Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 98/272 (36%), Positives = 146/272 (53%), Gaps = 7/272 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK +I TR S LA+ + R ++ + P + + + TKGD I + L +IGG Sbjct: 1 MEK--LKIATRKSVLAMWQSEHIRDKIL--SRYPELAVELTGMKTKGDVILDTPLAKIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E ++SGE AVHS KD+P +GL ++A RED+RD +S +D Sbjct: 57 KGLFTKELEDSMLSGETHIAVHSLKDVPVVFPEGLVLAAICSREDVRDAMLSEKYAKFED 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRRK LL R D+ +I RG ++TRL KL + AI+LA AG+ RL Sbjct: 117 LPEGARVGTTSLRRKMQLLAMRPDLEIISLRGNVQTRLRKLKEGEFDAIILAMAGVNRLN 176 Query: 181 KEKVIKEIL--NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + I+ ++ P+ GQGA+ IE + + L++ + E ER F+A Sbjct: 177 LRSEVAHIVPFELDQMIPAMGQGALGIEAR-EDAEILNLIEFLKDEKAVIETTVERDFVA 235 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 L+G C+ I A G + +V DG Sbjct: 236 MLEGGCQVPIGVNANLNGDKIEIRAVVGLPDG 267 >gi|17547076|ref|NP_520478.1| porphobilinogen deaminase [Ralstonia solanacearum GMI1000] gi|24211753|sp|Q8XWW3|HEM3_RALSO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|17429377|emb|CAD16064.1| probable porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase) (hmbs) (pre-uroporphyrinogen synthase) protein [Ralstonia solanacearum GMI1000] Length = 334 Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 102/265 (38%), Positives = 154/265 (58%), Gaps = 3/265 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF +E Sbjct: 24 IASRESRLAMWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLFVKE 81 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P +L G +SA L RED RD F+S+ L L +V+ Sbjct: 82 LEVALAEGRADLAVHSLKDVPMELPPGFVLSAILEREDPRDAFVSNDYADLAALPAGAVV 141 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A L + + RG ++TRL+KL+ AI+LA AG+KRL + I+ Sbjct: 142 GTSSLRREASLRARFPHLVIQPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLSERIRA 201 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 ++ E P+ GQGA+ IE+ V+ Q + ++H T +V ERA +L GSC+ Sbjct: 202 VIAPETSLPAAGQGALGIESRVDRHDVQAWLAPLHHAPTALAVTAERAVSRQLGGSCQVP 261 Query: 248 IAGFA-YCKGSTLYFYGIVLASDGK 271 +A FA + L V + DG+ Sbjct: 262 LAAFAQWTDAGALRLRAFVASPDGR 286 >gi|171057453|ref|YP_001789802.1| porphobilinogen deaminase [Leptothrix cholodnii SP-6] gi|170774898|gb|ACB33037.1| porphobilinogen deaminase [Leptothrix cholodnii SP-6] Length = 322 Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 94/258 (36%), Positives = 143/258 (55%), Gaps = 3/258 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P I TR S LAL A R L H + ++ ++T+GD+I +R L+++GGKGL Sbjct: 12 QPCIIATRESRLALWQAEHVRDLLQRRHGA---VVELLGMTTRGDQILDRALSKVGGKGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L AVHS KD+P +L +G ++A L RED RD ++S+ + L Sbjct: 69 FVKELEVALEEDRAQLAVHSLKDVPMELPEGFVLAAVLEREDPRDAWVSNHYDDVASLPQ 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRR L R D+ + RG ++TRL KL+ I+LA AG+KRL + Sbjct: 129 GARVGTSSLRRIVQLKAVRPDLEIHALRGNLDTRLRKLDEGLYDGIVLAAAGLKRLGLAQ 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ +++ P+ GQGA+ IE + +E + + TW +V+ ERA L GS Sbjct: 189 RIRSVIDPAVMLPAAGQGALGIEVRADASALREALAAMTDAPTWLAVHAERAVSRALGGS 248 Query: 244 CKSAIAGFAYCKGSTLYF 261 C +A FA +G+ L+ Sbjct: 249 CSMPLAAFAQWQGAQLHL 266 >gi|168206340|ref|ZP_02632345.1| porphobilinogen deaminase [Clostridium perfringens E str. JGS1987] gi|170662220|gb|EDT14903.1| porphobilinogen deaminase [Clostridium perfringens E str. JGS1987] Length = 291 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 98/289 (33%), Positives = 159/289 (55%), Gaps = 6/289 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LA + L + + ++++ T+GDR + +L +IGGKGLF +E Sbjct: 5 IATRKSKLAQVQTEKVMELLKEKENVDSKKLLVM---TEGDRRLDVSLNKIGGKGLFVKE 61 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L + I Sbjct: 62 IELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGARI 121 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI + Sbjct: 122 GTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVISD 181 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + + F P+ GQGA+ IE + + + K ++ ++ +V ER+F+ L+G C S Sbjct: 182 YFDPKVFLPAIGQGALGIEC-LKGGEFNKYFKALDSKEVRTTVEAERSFMKVLNGGCHSL 240 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I ++ K + LY G ++ + ++ GN+ D I +G+ A+ I Sbjct: 241 IGAYSEVKDNDLYMIGTFTVNNRIVKKDIL--GNKEDNILLGKKLAEKI 287 >gi|297197348|ref|ZP_06914745.1| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083] gi|297146690|gb|EDY58887.2| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083] Length = 314 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 147/291 (50%), Gaps = 6/291 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA RS L ++ P ++P+ T GD+ L+++ GKG FT Sbjct: 10 IRIVSRDSPMALAQVERVRSELTALY--PGVRTEVVPVRTTGDKWMG-DLSKVEGKGAFT 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +A+L R+DIRD I +L +L Sbjct: 67 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTTFAAFLKRDDIRDALIHPGGLTLDELPE 126 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSS+RR A L + + FRG RL KL +A A+LLA AG++R+ ++ Sbjct: 127 GTRVGTSSVRRVAQLAATHPHLECVPFRGNANRRLAKLEAGEADALLLAVAGLERIGRQD 186 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI E+L+ E P G G + ++ + + + V + DT+ ER FL L G Sbjct: 187 VISEVLSPETMMPPIGAGILGLQCREGDTELIDAVSALGDPDTYREATAERMFLHVLQGH 246 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 C S IAG+A G L V DGK R D +G A Sbjct: 247 CNSPIAGYARVDHGDELSLRACVFTPDGKTRLNAHEWAGRLDPATLGTSVA 297 >gi|167754990|ref|ZP_02427117.1| hypothetical protein CLORAM_00494 [Clostridium ramosum DSM 1402] gi|237735283|ref|ZP_04565764.1| porphobilinogen deaminase [Mollicutes bacterium D7] gi|167705040|gb|EDS19619.1| hypothetical protein CLORAM_00494 [Clostridium ramosum DSM 1402] gi|229381028|gb|EEO31119.1| porphobilinogen deaminase [Coprobacillus sp. D7] Length = 297 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 99/281 (35%), Positives = 149/281 (53%), Gaps = 9/281 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL L + P + I + T GD++ + L +I KG+F +E Sbjct: 5 VGSRGSSLALKQTEYVIEKLQRAY--PENEYEIKVIHTIGDKMQHIALDKINDKGVFVKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IEK+L+ ID AVHS KDMP+ GL + L D RD + SL L H+ I Sbjct: 63 IEKELLEHTIDLAVHSLKDMPSDNPAGLVYAKTLAPSDYRDCLVLKNCSSLARLPQHATI 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 T S RRK LL+ R D+ ++D RG + TRL K+ N + ++LA AG+KRL E +I E Sbjct: 123 ATGSKRRKYQLLKLRPDLKIVDIRGNVNTRLQKMANQEIDGLVLASAGLKRLGLEDLISE 182 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH---EDTWDSVNCERAFLAELDGSC 244 L+ P+ GQG + I+ ++ EL+ +IN+ E T + ER FL ++GSC Sbjct: 183 YLDETKMIPACGQGILAIQVRQDS----ELLTMINNISDEITTTRMELERLFLKTVNGSC 238 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA 285 + G+A G ++FYG++ DG + + + + DA Sbjct: 239 HIPVGGYAKIIGDQVHFYGLLGNEDGTVLKNIDKKFSLKDA 279 >gi|309389759|gb|ADO77639.1| porphobilinogen deaminase [Halanaerobium praevalens DSM 2228] Length = 310 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 103/278 (37%), Positives = 155/278 (55%), Gaps = 4/278 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK + IGTR S LAL ++ L K P I +ST GDR ++ +EI +G Sbjct: 2 KKEYIIGTRNSSLALKQCEILKAKLSS--KFPELEFKIKEISTTGDRERDKKFSEINVEG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F EIE L++ EID AVHS KD+PTKL L+++A + R + DV ++ L +LA Sbjct: 60 IFIREIEYALLAEEIDLAVHSFKDLPTKLPAELEVAAVVDRANRYDV-LAGAENKLAELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GT SLRRK+ LL +R D+ ++ RG IETRL K+ + ++LA AG++RL + Sbjct: 119 KGARLGTGSLRRKSQLLAYRPDLEIVPIRGNIETRLKKIKTHNLDGVILAAAGLERLGYK 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I E L E P+ QGA+ +E + K +E++K I E V E +FLAE++ Sbjct: 179 EQITEYLAPEICLPAARQGAVAVEIRKEDSKLKEILKTIETEKNNLEVWTEHSFLAEMEA 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRN 279 C + +A A + TL V DG +I +V++ Sbjct: 239 GCHAPVAAEAIIENKTLTLTAAVGEIDGSRIIKKVAKT 276 >gi|110801892|ref|YP_698741.1| porphobilinogen deaminase [Clostridium perfringens SM101] gi|123047375|sp|Q0ST16|HEM3_CLOPS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|110682393|gb|ABG85763.1| hydroxymethylbilane synthase [Clostridium perfringens SM101] Length = 291 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 98/289 (33%), Positives = 159/289 (55%), Gaps = 6/289 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LA + L + ++++ T+GDR + +L +IGGKGLF +E Sbjct: 5 IATRKSKLAQVQTEKVMELLKKKENVDSKKLLVM---TEGDRRLDVSLNKIGGKGLFVKE 61 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L + I Sbjct: 62 IELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGARI 121 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI + Sbjct: 122 GTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVISD 181 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + + F P+ GQGA+ IE + + + + K ++ ++ +V ER+F+ L+G C S Sbjct: 182 YFDPKVFLPAIGQGALGIEC-LKDGEFNDYFKALDSKEVRTTVEAERSFMKVLNGGCHSL 240 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I ++ K + LY G ++ + ++ GN+ D I +G+ A+ I Sbjct: 241 IGAYSEVKDNDLYMIGTFTVNNRIVKKDIL--GNKEDNILLGKKLAEKI 287 >gi|224419071|ref|ZP_03657077.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491] gi|253828009|ref|ZP_04870894.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491] gi|313142581|ref|ZP_07804774.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491] gi|253511415|gb|EES90074.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491] gi|313131612|gb|EFR49229.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491] Length = 314 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 104/297 (35%), Positives = 163/297 (54%), Gaps = 13/297 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LAL A + SL + P + + + TKGD+I + L +IGGKGLFT+E Sbjct: 6 IGTRGSVLALWQANFVKDSLE--KQYPNLQVELKIVKTKGDKILDVPLAKIGGKGLFTKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ ++ GEID AVHS KD+P + ++GL ++A RED+RD F+S ++L++L + + Sbjct: 64 LEELMLKGEIDVAVHSLKDVPVEFVEGLGLAAITKREDVRDSFLSFKYKNLQELPQGAKV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+SLRR + R D+ + RG ++TRL +L AI+LA AG+ RL E + Sbjct: 124 GTTSLRRVMQINTLRKDLDCMSLRGNVQTRLKRLKEGDFDAIILAQAGVNRLGIEGEVDC 183 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 I ++ P+ GQ A+ IE V++ A+ L++ +N + ER F+ L+G C+ Sbjct: 184 IAPLDFMIPAMGQAALGIECRVDSEVAK-LLEFLNDTKASFETSAEREFVKTLEGGCQVP 242 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC------DAINIGRD-AAQYIR 297 I A + L I+ DG + ++ C D GRD A ++I+ Sbjct: 243 IGINATLEKDNLTIRAILGIPDG---SRILKDAKVCAVSSLEDCKKAGRDFALEFIK 296 >gi|282865792|ref|ZP_06274842.1| porphobilinogen deaminase [Streptomyces sp. ACTE] gi|282559436|gb|EFB64988.1| porphobilinogen deaminase [Streptomyces sp. ACTE] Length = 311 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 99/291 (34%), Positives = 145/291 (49%), Gaps = 6/291 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L + P ++P+ T GD L+++ GKG FT Sbjct: 7 IRIVSRDSPMALAQVERVRNEL--AARYPALRTEVVPVRTTGDTWLG-DLSQVEGKGAFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +A+L R+DIRD + +L +L Sbjct: 64 KEVDAALLAGEADLAVHCVKDIPADRPLPAGTTFAAFLERDDIRDALVHPDGLTLDELPP 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S IGTSS+RR A L ++ + FRG RL KL + A+LLA +G++R+ + Sbjct: 124 GSRIGTSSVRRTAQLAASHPELRCVPFRGNANRRLAKLAAGEVDALLLAVSGLRRIGRPD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI +IL E P G G + ++ ++ + V +NH T+ + ER FL L G Sbjct: 184 VISDILGPETMIPPIGAGVLALQCRQDDTATIDAVAALNHPATYREITAERMFLHVLQGH 243 Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 C S IAG+A + L G V DGK D +G A Sbjct: 244 CNSPIAGYATSHRNGDLSLRGCVFTPDGKTVLNAHEWAGPLDPATLGTSVA 294 >gi|218677853|ref|ZP_03525750.1| porphobilinogen deaminase [Rhizobium etli CIAT 894] Length = 123 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 79/121 (65%), Positives = 92/121 (76%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A E R LM H +P I+ L+TKGDRIT+R+L+EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEEMFEIVVLTTKGDRITDRSLSEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E+KL +GE+D AVHSAKDMPT L GL +SAYLPREDIRD + TA L D Sbjct: 61 KGLFTEELEQKLAAGELDFAVHSAKDMPTNLPDGLHLSAYLPREDIRDAVVGRTAPKLID 120 Query: 121 L 121 L Sbjct: 121 L 121 >gi|237736083|ref|ZP_04566564.1| porphobilinogen deaminase [Fusobacterium mortiferum ATCC 9817] gi|229421794|gb|EEO36841.1| porphobilinogen deaminase [Fusobacterium mortiferum ATCC 9817] Length = 299 Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 100/264 (37%), Positives = 144/264 (54%), Gaps = 4/264 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60 KK IG+R S LALA + + L P + I + T GD+ ++N ++ Sbjct: 2 KKKIVIGSRGSILALAQSEIVKQQLE--KNFPEYEFEIKKIVTSGDKDLVSNWNNSDKSL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE +L++ ID AVHS KDMP+ +GL A RED RDV IS ++L + Sbjct: 60 KSFFTKEIEVELLNETIDLAVHSMKDMPSISPEGLICGAIPDREDQRDVLISKNGKTLME 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR + R D+ + RG I TRLNKL AILLA AG+KR+ Sbjct: 120 LPKGAIVGTSSLRRTMNIKSLRPDLQIKQLRGNIHTRLNKLKTEDYDAILLAAAGLKRVG 179 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I E L+ + F P+P QG + I+ N+ + + ++K I+ ED V ER F Sbjct: 180 LENEITEYLDPKIFLPAPAQGVLHIQCRENDEEIKNILKTIHKEDIKKIVVIEREFSKIF 239 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGI 264 DG C + + ++ G + FYG+ Sbjct: 240 DGGCHTPMGCYSEVNGDKITFYGV 263 >gi|312622563|ref|YP_004024176.1| porphobilinogen deaminase [Caldicellulosiruptor kronotskyensis 2002] gi|312203030|gb|ADQ46357.1| porphobilinogen deaminase [Caldicellulosiruptor kronotskyensis 2002] Length = 290 Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 148/294 (50%), Gaps = 6/294 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIG R S L+ + I +P+ TKGD ++L + G+ Sbjct: 2 KKLRIGARDSKLSRIQVDIVARKIKQTLGIECE---FVPIKTKGDIDKTKSLKDFKSPGV 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L S EID AVHS KD+P ++ I A + RED RDV +S L Sbjct: 59 FVKEIELALFSREIDLAVHSLKDLPCEMDSNFDIVAVVEREDSRDVLVSKDGVGFYQLKP 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++ IGTSSLRR+ L R DI V++ RG IETRL+K+ + ++LAYA +KRL + Sbjct: 119 NAKIGTSSLRREVHLKNLREDIQVVNIRGNIETRLSKIESEGLDGVVLAYAALKRLNLDS 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + I ++ + P PGQGAICIE ++P L K IN D + ER L L G Sbjct: 179 RVSYIFDVNEITPCPGQGAICIECLKDSPYKNILNK-INDTDAYIQTQFERLVLKFLGGG 237 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C S+I F +Y + +L D + + S G++ D +++ + ++ Sbjct: 238 CHSSIGVFCKTDQDKIYAFASLLRGDKLV--KASIEGDKADFLSLANKLSNMLK 289 >gi|217070488|gb|ACJ83604.1| unknown [Medicago truncatula] Length = 214 Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 95/210 (45%), Positives = 126/210 (60%), Gaps = 4/210 (1%) Query: 85 KDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSD 144 KD+PT L + + LPRED+RD FIS +A SL DL SVIGT+SLRRK+ +L Sbjct: 2 KDVPTYLPEKTILPCNLPREDVRDAFISLSAASLADLPAGSVIGTASLRRKSQILHRYPS 61 Query: 145 ISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAI 203 +SV D FRG ++TRL KL+ A LLA AG KRL + + L+I+D P+ QGAI Sbjct: 62 LSVQDNFRGNVQTRLRKLSEGVVKATLLALAGPKRLNMTENVTSTLSIDDMLPAVAQGAI 121 Query: 204 CIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY-CKGSTLYFY 262 I N+ K E + +NHE+T +++CERAFL LDGSC++ IAG+A K F Sbjct: 122 GIACRSNDDKMAEYLASLNHEETRLAISCERAFLTTLDGSCRTPIAGYASRDKDGNCLFR 181 Query: 263 GIVLASDGKIFHEVSRNGNRC--DAINIGR 290 G+V + DG E SR G D + +GR Sbjct: 182 GLVASPDGTRVLETSRIGPYAYEDMMKMGR 211 >gi|159041687|ref|YP_001540939.1| porphobilinogen deaminase [Caldivirga maquilingensis IC-167] gi|189042877|sp|A8MDU3|HEM3_CALMQ RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157920522|gb|ABW01949.1| porphobilinogen deaminase [Caldivirga maquilingensis IC-167] Length = 305 Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 106/296 (35%), Positives = 159/296 (53%), Gaps = 17/296 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S L+L +++ +K ++I+ T GD ++ L EIG KG+F Sbjct: 3 IRIATRGSALSLKQTKIVMDRILEFNKDVEFKLIIV--KTTGDVDLSKPLYEIGVKGIFE 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E+ + ++ GE D AVHS KDMP ++ L + PR++ RD +S ++ L L+S Sbjct: 61 REVNQAVLRGEADVAVHSLKDMPAQISNDLTLVMTPPRDNPRDALVSLRQYTVDTLPLNS 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ LL R D++V RG ++TR+ KLNN + A+++A AG++RL + Sbjct: 121 IVGTSSLRRRGFLLSLRRDVTVKPIRGNVDTRIRKLNNGEYDALIMAAAGLERLSINANV 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI---NHEDTWDSVNCERAFLAELDG 242 EI + E PP+PGQG I + V +L+KV+ + E+T+ ERAFL+ + Sbjct: 181 SEI-SPELMPPAPGQGIIGV---VARRDRDDLIKVLRRSSDEETFKEAAAERAFLSRIGA 236 Query: 243 SCKSAIAGFAYCKGSTLYF-YGIVLASDGKIFHEVSRNGNRCDAIN---IGRDAAQ 294 C + G A F YG+V DG E N R DA N GR AA+ Sbjct: 237 GCHVPLGGLALLDDGYFDFTYGVV-DPDG---VEKFINSTRIDARNPEEAGRVAAE 288 >gi|91782420|ref|YP_557626.1| porphobilinogen deaminase [Burkholderia xenovorans LB400] gi|91686374|gb|ABE29574.1| Porphobilinogen deaminase [Burkholderia xenovorans LB400] Length = 285 Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 94/229 (41%), Positives = 137/229 (59%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 ++T+GD+I +RTL+++GGKGLF +E+E L G D AVHS KD+P L +G +S + Sbjct: 1 MTTRGDQILDRTLSKVGGKGLFVKELEAALADGRADLAVHSLKDVPMALPEGFALSTIME 60 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 RED RD +S+T SL L +V+GTSSLRR+A+L + V RG ++TRL KL+ Sbjct: 61 REDPRDALVSNTYDSLAALPEGAVVGTSSLRREAMLRMRYPHLEVRPLRGNLDTRLAKLD 120 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 AI+LA AG+KRL + I+ +L+ ED P+ GQGA+ IE + + + ++ Sbjct: 121 RGDYAAIILAAAGLKRLGLGERIRALLDPEDSLPAAGQGALGIEIRADRAELAAWLAPLH 180 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 HE T +V ER L GSC+ +A +A L+ GIV DG+ Sbjct: 181 HEHTAAAVEAERMVSRALGGSCEVPLAAYATWHDGALHLRGIVATPDGQ 229 >gi|295109819|emb|CBL23772.1| hydroxymethylbilane synthase [Ruminococcus obeum A2-162] Length = 308 Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 97/291 (33%), Positives = 160/291 (54%), Gaps = 8/291 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LA+ + R + H P ++ I+ + T GD+I +RTL ++GGKGLF +E Sbjct: 12 IGSRESRLAVLQSEMVRDYIKTQH--PELDVEILTMKTTGDKILDRTLDKVGGKGLFVKE 69 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 ++K L+ G +VHS KDMP ++ L + A+ RED RDV + + + +L L + Sbjct: 70 LDKALLEGRTMLSVHSLKDMPMEVPGELPLLAFSKREDPRDVLV--LPEGVSELDLTKPL 127 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 G SSLRR L ++ V RG ++TRL KL+N + ++LA AG+KRL E I Sbjct: 128 GCSSLRRTLQLKELYPEMEVKSIRGNLQTRLRKLDNGEYSGLILAAAGLKRLGLENRICR 187 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + ++ P+ GQG + ++ + + ++ E W + + ERAF+ L+G C S Sbjct: 188 YFSEDEILPAAGQGILAVQGRQD--LTYDYLEGYRDEKAWFAGSAERAFVKYLNGGCSSP 245 Query: 248 IAGFAYCKGSTLYFYGIVLAS-DGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +A + +G L+ G+ DG+ F + R G + +A +GRD A+ ++ Sbjct: 246 VAAYGVVEGDELFLRGLYYRECDGRYFKDSIR-GPKSEAEKLGRDLAKRMQ 295 >gi|152980451|ref|YP_001352832.1| hydroxymethylbilane synthase [Janthinobacterium sp. Marseille] gi|151280528|gb|ABR88938.1| hydroxymethylbilane synthase [Janthinobacterium sp. Marseille] Length = 317 Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 104/294 (35%), Positives = 158/294 (53%), Gaps = 2/294 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LA+ A R L ++ P +I I+ ++T+GD+I +RTL+++GGKGL Sbjct: 7 KKLVIASRESRLAMWQAEHVREKLAILY--PQCSIEILGMTTRGDQILDRTLSKVGGKGL 64 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E + D AVHS KD+ L G +++A L RED RD F+S+ +L+ L Sbjct: 65 FVKELEVAIAEQRADLAVHSLKDVAMTLPDGFELAAVLEREDPRDAFVSNEFDTLEALPA 124 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+AL+ + + RG ++ RL KL+N + AI+LA AG+KRL Sbjct: 125 GAIVGTSSLRRQALIAARYPQLVIRPLRGNLDRRLGKLDNGEYAAIILAAAGLKRLGLTA 184 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L E P+PGQGA+ IE +E + +NH +T +V ER GS Sbjct: 185 RIRSYLPPEQSLPAPGQGAMAIEILSERADLKEWLAPLNHTETALAVTAERTVSRNFGGS 244 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C+ +A FA G + I+ DG +G +GR A ++ Sbjct: 245 CQIPLAAFATIDGVNMRLRAIIATPDGSKMASADLSGAANAPEALGRQIADALQ 298 >gi|325262509|ref|ZP_08129246.1| hydroxymethylbilane synthase [Clostridium sp. D5] gi|324032341|gb|EGB93619.1| hydroxymethylbilane synthase [Clostridium sp. D5] Length = 293 Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 100/294 (34%), Positives = 153/294 (52%), Gaps = 10/294 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LA+ A + + H P + ++ + T GD+I +++L IGGKGLF Sbjct: 5 IRIGSRESRLAVIQAEIVKELIQKNH--PDIQVELVTMKTTGDKILDKSLELIGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++K L+ G ID +VHS KDMP ++ K L I+AY RED RD I ++ + Sbjct: 63 KELDKALLEGSIDISVHSLKDMPMEIPKELPIAAYSKREDPRDALICRPGCC--EIPVDG 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS RR L + + + RG ++TRL KL +LA AG+ RL E VI Sbjct: 121 VIGTSSRRRSLQLKKLYPECTFRQIRGNVQTRLRKLEEEGYDGTILAAAGLSRLNMEHVI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQE--LVKVINHEDTWDSVNCERAFLAELDGS 243 I + E+ P+ GQG + ++ K ++ + + ++ + ER F+A LDG Sbjct: 181 GRIFSTEEMIPAAGQGILAVQGR----KGEDHFFLDCVENKKSRAEALAEREFVAVLDGG 236 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C S +A A G+ L G+ + + +R GN DA +G A+ +R Sbjct: 237 CTSPVAAHAEVNGNELKLTGLYYREEDDTYWTETRIGNTADARQLGAALAEEMR 290 >gi|56552799|ref|YP_163638.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis ZM4] gi|260753474|ref|YP_003226367.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|56544373|gb|AAV90527.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis ZM4] gi|258552837|gb|ACV75783.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 308 Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 109/286 (38%), Positives = 155/286 (54%), Gaps = 5/286 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 PFR+G+R SPLAL A S+L H +VI+P+ T GD+ ++ L +IGGK L+ Sbjct: 4 PFRLGSRGSPLALIQARSVASALCAAHSWSEDAVVIVPIRTSGDKNRHQALADIGGKALW 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E++ L +G+ID AVHS KD+ T + I+A LPRED+ D I SL+ L Sbjct: 64 TKELDIALTTGQIDAAVHSMKDVETFRPSHISIAAMLPREDVHDRLIG--IPSLEVLPYS 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +GT+S RR A + R R DI + RG I+TRL KL N + A LLA AG+ RL + V Sbjct: 122 GCVGTASPRRAAQIRRIRPDIEIKLLRGNIDTRLEKLANKQFDATLLAAAGLIRLGRNDV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++ P+ GQGAI IE ++ A E V +I+H T +V ER L L+ C Sbjct: 182 GYDV-PLDQMLPAAGQGAIGIEALADS-AAWEKVSIIDHYPTHLAVQSERQLLLRLNADC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-GNRCDAINIG 289 S IA FA + + +GK + + DA +G Sbjct: 240 HSPIAVFAEILEKNIRLRACLYTENGKFSASIDKEISQPSDAFEVG 285 >gi|253582657|ref|ZP_04859878.1| uroporphyrinogen III synthase/methyltransferase [Fusobacterium varium ATCC 27725] gi|251835527|gb|EES64067.1| uroporphyrinogen III synthase/methyltransferase [Fusobacterium varium ATCC 27725] Length = 306 Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 109/297 (36%), Positives = 154/297 (51%), Gaps = 6/297 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60 K+ IGTR S LA+A + + L + P I + T GD ++N ++ Sbjct: 9 KRKIVIGTRGSILAMAQSEMIKKMLEN--NFPELEFEIKKIVTSGDTDLVSNWNNSDKSL 66 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE +L++G ID AVHS KDMP +GL A RED RDV IS + ++L + Sbjct: 67 KSFFTKEIEVELLNGTIDLAVHSMKDMPVVSPEGLICGAVPDREDSRDVLISKSGKTLME 126 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSSLRR L RSD+ + RG I TRLNKL AILLA AG+KR+ Sbjct: 127 LPKGAVIGTSSLRRTMNLKNLRSDLKIKQLRGNIHTRLNKLKTENYDAILLAAAGLKRVG 186 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I E L+ E F P+P QG + I+ N+ + +E++K I+++D V ER F Sbjct: 187 LENEITEYLDPEKFLPAPAQGVLHIQCRENDEEIKEILKSIHNKDMEKIVVIEREFSKIF 246 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 DG C + + G + G+ G+ + S + I I + A I+ Sbjct: 247 DGGCHTPMGCHCILNGDKITLTGVYFK--GETGYSASITEDAALGIKIAQKLADIIK 301 >gi|18310417|ref|NP_562351.1| porphobilinogen deaminase [Clostridium perfringens str. 13] gi|168216823|ref|ZP_02642448.1| porphobilinogen deaminase [Clostridium perfringens NCTC 8239] gi|25453024|sp|Q8XKG4|HEM3_CLOPE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|18145097|dbj|BAB81141.1| hydroxymethylbilane synthase [Clostridium perfringens str. 13] gi|182381001|gb|EDT78480.1| porphobilinogen deaminase [Clostridium perfringens NCTC 8239] Length = 291 Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 98/289 (33%), Positives = 158/289 (54%), Gaps = 6/289 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LA + L + ++++ T+GDR + +L +IGGKGLF +E Sbjct: 5 IATRKSKLAQVQTEKVMELLKGKENVDSKKLLVM---TEGDRRLDVSLNKIGGKGLFVKE 61 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L + I Sbjct: 62 IELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGARI 121 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI + Sbjct: 122 GTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVISD 181 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + + F P+ GQGA+ IE + + + K ++ ++ +V ER+F+ L+G C S Sbjct: 182 YFDPKVFLPAIGQGALGIEC-LKGGEFNDYFKALDSKEVRTTVEAERSFMKVLNGGCHSL 240 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I ++ K + LY G ++ + ++ GN+ D I +G+ A+ I Sbjct: 241 IGAYSEVKDNDLYMIGTFTVNNRIVKKDIL--GNKEDNILLGKKLAEKI 287 >gi|88608800|ref|YP_506274.1| putative porphobilinogen deaminase [Neorickettsia sennetsu str. Miyayama] gi|88600969|gb|ABD46437.1| putative porphobilinogen deaminase [Neorickettsia sennetsu str. Miyayama] Length = 286 Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 159/290 (54%), Gaps = 15/290 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGGKGL 63 ++GTRCSPLAL A +L P+ ++ + T GD +++ LTE+GGK L Sbjct: 4 LKVGTRCSPLALIQARLVERAL------APYCARTDLVEVKTSGDIVSDVPLTEVGGKAL 57 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+KL++GEID AVHS KD+P L++ L R DVF+S ++ L Sbjct: 58 FLKELEEKLLTGEIDIAVHSMKDVPAFYHDDLEVVPVLKRAIPNDVFVSFRYPNMLSLPN 117 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +VIGT + RR +++ VI RG I TR+ K N I+LA+ ++RL + Sbjct: 118 GAVIGTCAPRR---VVQLNQRFRVIPLRGNIATRIEKAKN--LDGIILAFCALERLGLRR 172 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +I E+++ P QGA+C+E + +EL+ I+ +T ERAFL E++G Sbjct: 173 MISEVIHENVMLPGVAQGALCVEFRKKDRFLRELILNISDRETIICTAAERAFLEEINGD 232 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 CK+A+ A K + LYF G+ LA D + + +G+ +A +GR AA Sbjct: 233 CKTALGALAIVKNNILYFTGM-LAKDNRPRY-FRTSGSCLNAKQVGRRAA 280 >gi|186683929|ref|YP_001867125.1| porphobilinogen deaminase [Nostoc punctiforme PCC 73102] gi|186466381|gb|ACC82182.1| porphobilinogen deaminase [Nostoc punctiforme PCC 73102] Length = 336 Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 105/297 (35%), Positives = 158/297 (53%), Gaps = 5/297 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + + L P + +ST+GD+I + L +IG KGL Sbjct: 23 RTIRIGSRKSQLALVQTYWVQEQLQ--KSFPDITFEVHTMSTQGDKILDVALAKIGDKGL 80 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120 FT+E+E +++ EID AVHS KD+PT L +GL ++A RE+ D + H + + Sbjct: 81 FTKELEVGMLNQEIDFAVHSLKDLPTNLPEGLTLAAITERENPADALVVHEKHKDKQIDT 140 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSSLRR A L + D RG + TRL KL+ + A++LA AG++RL Sbjct: 141 LPEGAVIGTSSLRRLAQLRHHFPHFTFKDVRGNLITRLAKLDAGEYDALILAAAGLERLG 200 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + +I+ E + GQGA+ IE ++ + L+K I H T D ER+FL L Sbjct: 201 MSDRVHQIIPKEISLHAVGQGALGIECRADDSELLTLLKAIEHPATRDRCLAERSFLRSL 260 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +G C+ I G L GIV + DG+ + + G +A +G + A+ +R Sbjct: 261 EGGCQVPIGVNTEISGENLTLTGIVASIDGQKLVKDTVTGIANNAEALGTELAELLR 317 >gi|238022038|ref|ZP_04602464.1| hypothetical protein GCWU000324_01943 [Kingella oralis ATCC 51147] gi|237866652|gb|EEP67694.1| hypothetical protein GCWU000324_01943 [Kingella oralis ATCC 51147] Length = 316 Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 7/273 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + I +R S LA+ A ++ L ++ P I II ++T+GD+I ++TL++IGGKGL Sbjct: 8 QTLTIASRESALAMWQARHIQAQLQSLY--PQCQIHIIGMTTQGDQILDKTLSKIGGKGL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L D AVHS KD+P L +G ++A R + D F+S+ L++L Sbjct: 66 FIKELETALQENRADLAVHSIKDVPMDLPQGFTLAAIGERANPFDAFVSNRYTRLEELPH 125 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+A L +++ RG ++TRL KL+N AI+LA AG++RL+ + Sbjct: 126 GAIVGTSSLRREAQLRARFPHLTIRPLRGNVQTRLAKLDNGDYDAIILAAAGLERLELHE 185 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ +L D P+ GQGA+ IE + +++ +NH T V ERA L GS Sbjct: 186 RIRAVLPPADSLPAAGQGALGIEIAAHRTDLIDVLLPLNHAKTAACVTAERALARALGGS 245 Query: 244 CKSAIAGFAYCKG---STLYFYGIVLASDGKIF 273 C+ +A AYC L G+V DG + Sbjct: 246 CQVPLA--AYCTADDHGLLTLSGLVGHPDGSVI 276 >gi|223648136|gb|ACN10826.1| Porphobilinogen deaminase [Salmo salar] Length = 359 Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 104/269 (38%), Positives = 144/269 (53%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA L ++ P ++ I+ ++T GD+I + L++IG K LFT Sbjct: 19 IRIGTRKSQLARIQTDSVAEKLKGLY--PDVHLEIVGMTTTGDKILDTALSKIGEKSLFT 76 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A L RE+ D + H +SL L Sbjct: 77 KELETALEKNEVDLVVHSLKDLPTTLPPGFTIGAVLKRENPHDAVVLHPKNMGKSLDTLP 136 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181 SVIGTSSLRR A L + + D RG + TRL KL+ + AI+LA AG++R+ Sbjct: 137 DKSVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDEKDDFSAIILAAAGLRRMGW 196 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + +IL ED + GQGA+ IE + E+V V++ +T ERAFL L+ Sbjct: 197 DSRVSQILGPEDCMYAVGQGALAIEVRARDEDILEMVSVLHDPNTVLRCIAERAFLRRLE 256 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K S LY G V + DG Sbjct: 257 GGCSVPVAVHTEVKDSQLYLTGAVYSLDG 285 >gi|297172436|gb|ADI23410.1| porphobilinogen deaminase [uncultured gamma proteobacterium HF0770_28K04] Length = 311 Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 104/294 (35%), Positives = 155/294 (52%), Gaps = 4/294 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F +GTR S L+LA S L + P I ++T GD T R L I KG+F Sbjct: 3 FLVGTRGSKLSLAQTNWVISELQKQN--PGSEFEIKTITTNGDTDT-RALFTIDQKGIFE 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EI+K + +ID AVHS KD+P+ + K L I+ RE DV I+ +LK + L++ Sbjct: 60 KEIDKAVAEKQIDFAVHSLKDVPSDISKSLTIACVPKRESANDVLITKDGFNLKTIPLNA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR + R R D+ V RG IETR+NK+ + K AI+LA AGI RL + V Sbjct: 120 VVGTSSLRRAVQVSRIRPDVVVKPVRGNIETRINKVIDGKFDAIILAEAGISRLGLD-VK 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +L+ +DFPPSPGQGA+ I ++ K ++K I + + + ERA ++ C+ Sbjct: 179 HSVLSTKDFPPSPGQGALAIVCRADDDKTISMLKKIEDKKSRIEIESERALSDYVESGCR 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + A L + DGK + + G+ N+G+ + ++ I Sbjct: 239 FPVGALAIANSGMLKLTVTAYSVDGKKSITIEKTGDIDKPRNLGQGVGEELQKI 292 >gi|313682001|ref|YP_004059739.1| porphobilinogen deaminase [Sulfuricurvum kujiense DSM 16994] gi|313154861|gb|ADR33539.1| porphobilinogen deaminase [Sulfuricurvum kujiense DSM 16994] Length = 313 Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 96/248 (38%), Positives = 141/248 (56%), Gaps = 5/248 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL + +S + + II T GD+I + L +IGGKGL Sbjct: 2 KKLTIATRGSKLALWQSNHIKSVIESQFSDVEVELKII--ITSGDKILDVPLAKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ ++ GE AVHS KD+PT + +GL +SA RED+RD +S +K L Sbjct: 60 FLKEIEESMLRGEAQMAVHSLKDVPTVMPQGLLLSAITVREDVRDAMLSEKYPDIKSLPQ 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR+ L++ R D+ + D RG ++TR+ KL + AI+LA AGI RL Sbjct: 120 GAVVGTSSLRRRMQLVQQRPDLVIKDLRGNVDTRIRKLKEGEFDAIILAAAGINRLGFSN 179 Query: 184 VIKEI--LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +++ + +++ P+ GQGA+ IET VN P E+ K + E++ ER F+ L Sbjct: 180 LVQYFYPIALDEMLPAMGQGALGIET-VNEPWVLEIAKFLEDENSRIETTIERGFVDTLQ 238 Query: 242 GSCKSAIA 249 G C+ I Sbjct: 239 GGCQVPIG 246 >gi|310826391|ref|YP_003958748.1| uroporphyrinogen III synthase/methyltransferase [Eubacterium limosum KIST612] gi|308738125|gb|ADO35785.1| uroporphyrinogen III synthase/methyltransferase [Eubacterium limosum KIST612] Length = 804 Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 102/295 (34%), Positives = 160/295 (54%), Gaps = 8/295 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +G+R S LA+ +T L ++ K P + + + TKGD+I ++ L +IG KG+FT+ Sbjct: 5 VGSRGSKLAVV---QTNWLLEELRKANPEVDFELKIIKTKGDKIQHKALDKIGDKGIFTK 61 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDLALHS 125 E+E L+SGEID AVHS KDMP+ L GL +S RED RDV ++ H ++++L ++ Sbjct: 62 ELEDALLSGEIDMAVHSMKDMPSALPDGLTLSVPPMREDPRDVLLTPHKISAIQELPENA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 VIGT S RR L R D V+ RG I+TR+ K+ I+LA AG+KR+ E Sbjct: 122 VIGTGSKRRIYQLKNIRKDFEVVGIRGNIDTRIRKMKEQGLDGIILAAAGLKRIGVYESG 181 Query: 185 IKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 L ++ F +P QG + +E +N + L++ +++ T + ER FL L+G Sbjct: 182 DYTCLPLDPCQFVSAPAQGILAVEIREDNETVKALMESVSNPVTKAQMTAERQFLISLNG 241 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 SC I + +G L YG+ DG I ++ G + +G A+ ++ Sbjct: 242 SCHIPIGAYCNVEGEKLTLYGLFGNEDGTILYKGQTEGAMGEEAKMGDRLAKELK 296 >gi|58040313|ref|YP_192277.1| porphobilinogen deaminase [Gluconobacter oxydans 621H] gi|58002727|gb|AAW61621.1| Porphobilinogen deaminase [Gluconobacter oxydans 621H] Length = 357 Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 112/318 (35%), Positives = 164/318 (51%), Gaps = 19/318 (5%) Query: 3 KKPFRIGTRCSPLALAHA--FETRSS-----LMDVHKIPPHNIVIIPLSTKGDRITNRTL 55 K P R+G+R SPLAL F TR + L D+ + I ST+GDR + L Sbjct: 40 KLPLRVGSRASPLALVQTRNFLTRLTRFCPVLRDMGAFQEYQI-----STEGDRNLVQRL 94 Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115 EIGGKGLF +EI + L +G ID AVHS KD+ T L GL ++ L RED RD I Sbjct: 95 AEIGGKGLFAKEIHEALAAGRIDFAVHSLKDLETNLPPGLVLACTLKREDARDALILRDR 154 Query: 116 QSLKD-------LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA 168 D L ++IG +S+RR+A +L R D+ RG ++TRL+KL A Sbjct: 155 DVKVDPQRPYDCLPEGALIGCASVRRQAQMLHVRPDLRFCLLRGNVQTRLDKLRAGACEA 214 Query: 169 ILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD 228 LLA AG++RL E + +L + P+ GQG + + ++ + +EL+ I + Sbjct: 215 TLLALAGLRRLGMEDRVDVVLEPDQMLPASGQGIVGVTVRESDLELRELLSAIEDPEARA 274 Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 ERA LAELDGSC++ I G+A + L G++ + DG G +A + Sbjct: 275 VSTAERALLAELDGSCRTPIGGYARIENGVLKLSGMIASEDGTFLLRREIEGAPLEAARL 334 Query: 289 GRDAAQYIRFISNKNVFN 306 G + A +R + ++F+ Sbjct: 335 GTELADELRRDTPAHIFD 352 >gi|312127739|ref|YP_003992613.1| porphobilinogen deaminase [Caldicellulosiruptor hydrothermalis 108] gi|311777758|gb|ADQ07244.1| porphobilinogen deaminase [Caldicellulosiruptor hydrothermalis 108] Length = 290 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 91/249 (36%), Positives = 138/249 (55%), Gaps = 3/249 (1%) Query: 41 IPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAY 100 +P+ TKGD ++L + G+F +EIE+ L++ EID AVHS KD+P ++ +I A Sbjct: 36 VPIKTKGDIDKTKSLKDFKSPGVFVKEIERALLTREIDLAVHSLKDLPCEIDSNFEIVAV 95 Query: 101 LPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK 160 + RED RDV +S L ++ IGTSSLRR+ L R DI V++ RG IETRL+K Sbjct: 96 VEREDPRDVLVSKDGVGFYQLKPNAKIGTSSLRREVHLKNLREDIQVVNIRGNIETRLSK 155 Query: 161 LNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220 + + +++AYA +KRL + + I +I + P PGQGAICIE ++P L K Sbjct: 156 IESEGLDGVIVAYAALKRLNLDSYVSYIFDINEITPCPGQGAICIECLKDSPYKSILSK- 214 Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 IN + + ER L L G C S+I F +Y + +L D + + S G Sbjct: 215 INDVNAYIQTQFERLVLKFLGGGCHSSIGVFCKTDQDKIYAFASLLRGDKLV--KASIEG 272 Query: 281 NRCDAINIG 289 ++ D +++ Sbjct: 273 DKADFLSLA 281 >gi|225872374|ref|YP_002753829.1| hydroxymethylbilane synthase [Acidobacterium capsulatum ATCC 51196] gi|225793745|gb|ACO33835.1| hydroxymethylbilane synthase [Acidobacterium capsulatum ATCC 51196] Length = 312 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 98/247 (39%), Positives = 139/247 (56%), Gaps = 8/247 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL----TEIGGK 61 RIG+R S LAL A + L + H + I + T GD + + T TE+GGK Sbjct: 2 MRIGSRGSQLALWQANHIAARLRTLG----HEVTIEIIRTTGDALQHVTFAKVSTELGGK 57 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT+EIE+ L G ID AVHS KD+PT L ++A R D RD +S SL L Sbjct: 58 GIFTKEIEEALREGRIDLAVHSLKDLPTDLDPAFTLAAIPERVDPRDALLSARYTSLASL 117 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSS RR+A LL RSD+ +FRG ++TR+ K+ +A AI+LA AG++RL Sbjct: 118 PHGACVGTSSERRRAQLLVHRSDLRFQEFRGNVDTRIRKMVEGQADAIILASAGLERLGL 177 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + +E L E P+ GQGA+ IET ++ + ++ ++H T +V ER LA L Sbjct: 178 TEYRRECLAPEILCPAAGQGALAIETRADDAETLAILASLDHSATRYAVTAERTALASLG 237 Query: 242 GSCKSAI 248 G C+ I Sbjct: 238 GGCQVPI 244 >gi|291277466|ref|YP_003517238.1| porphobilinogen deaminase [Helicobacter mustelae 12198] gi|290964660|emb|CBG40515.1| porphobilinogen deaminase [Helicobacter mustelae 12198] Length = 315 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 108/297 (36%), Positives = 160/297 (53%), Gaps = 9/297 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LAL A L I ++ T+GDR+ + L +IGGKGLFT+E Sbjct: 10 IGTRGSALALWQAEYIAMRLKKELGIESRLQIV---KTQGDRMLDVPLAKIGGKGLFTKE 66 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +EK L+ +ID AVHS KD+P + ++GL ++ RED+RD F+S S+ DL + + Sbjct: 67 LEKLLLQEKIDIAVHSLKDVPVEFVEGLDLACITKREDVRDCFLSVRYASILDLPPGARV 126 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--KKEKV- 184 GT+SLRR L R D+ RG ++TRL +L + + AI+LA AG+ RL ++KV Sbjct: 127 GTTSLRRSMQLKILRKDLDTQSLRGNVQTRLKRLFDGEFDAIILAQAGLNRLGIDQQKVP 186 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + E+ P+ GQGA+ IE + L++ +N E T N ER F+ LDG C Sbjct: 187 FLKPFSTEELIPAMGQGALGIEAREGD-GIFSLLQGLNDEATAICTNAERTFIRVLDGGC 245 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 + I A C + I+ DG S +G+ D+I + + A+ RF+S Sbjct: 246 QVPIGVHAQCNNQDFVIHAILGLPDGSKVLRDSISGSTKDSILLAENLAE--RFLSQ 300 >gi|148642941|ref|YP_001273454.1| porphobilinogen deaminase [Methanobrevibacter smithii ATCC 35061] gi|222445181|ref|ZP_03607696.1| hypothetical protein METSMIALI_00802 [Methanobrevibacter smithii DSM 2375] gi|261350258|ref|ZP_05975675.1| hydroxymethylbilane synthase [Methanobrevibacter smithii DSM 2374] gi|148551958|gb|ABQ87086.1| porphobilinogen deaminase [Methanobrevibacter smithii ATCC 35061] gi|222434746|gb|EEE41911.1| hypothetical protein METSMIALI_00802 [Methanobrevibacter smithii DSM 2375] gi|288861043|gb|EFC93341.1| hydroxymethylbilane synthase [Methanobrevibacter smithii DSM 2374] Length = 289 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 103/285 (36%), Positives = 157/285 (55%), Gaps = 6/285 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LALA +T D+ I NI + + TKGD+ITN L + KGLFT Sbjct: 1 MNVGTRGSQLALA---QTNQVCKDLASITNENIDVNIIKTKGDKITNSQLYNMDAKGLFT 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++K L+ EID AVHS KD+PT+L + L+I+A R +V IS+ ++ +L +S Sbjct: 58 KELDKALLEEEIDFAVHSFKDLPTELDEELEIAAVPKRVAPNEVLISN--KNWDELGPNS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A + RG IETR++K+N + A L+A AG+ RL + I Sbjct: 116 KLGTSSLRREAFCNYHNKCFELKPIRGNIETRISKVNGSDLDATLMAQAGLIRLNLTQHI 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 K + ++ P+ GQGA+ I T ++ K +E++ +N + V E+ L EL C+ Sbjct: 176 KTVFPLDYITPAAGQGALAIITRKDSDK-KEIISKLNDYQSRQEVFAEKQVLEELGVGCQ 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 I A K Y I+L +G++ E + G+ DA+ G+ Sbjct: 235 WPIGAIAQMKDKQFCIYSILLTKEGEVLKEHTEKGSIRDAVQFGK 279 >gi|307728969|ref|YP_003906193.1| porphobilinogen deaminase [Burkholderia sp. CCGE1003] gi|307583504|gb|ADN56902.1| porphobilinogen deaminase [Burkholderia sp. CCGE1003] Length = 307 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 95/243 (39%), Positives = 142/243 (58%), Gaps = 1/243 (0%) Query: 30 VHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMP 88 +HK+ P + I+ ++T+GD+I +RTL+++GGKGLF +E+E L G D AVHS KD+P Sbjct: 11 LHKLYPSCEVKILGMTTRGDQILDRTLSKVGGKGLFVKELEAALADGRADLAVHSLKDVP 70 Query: 89 TKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVI 148 +L G +S + RED RD +S+ SL L +V+GTSSLRR+A+L + V Sbjct: 71 MELPPGFALSTIMEREDPRDALVSNHYDSLAALPAGAVVGTSSLRREAMLRMRYPHLEVR 130 Query: 149 DFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH 208 RG ++TRL KL+ AI+LA AG+KRL I+ +L+ +D P+ GQGA+ IE Sbjct: 131 PLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLGDRIRALLDPQDSLPAAGQGALGIEIR 190 Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS 268 + + ++HE T +V ER L GSC+ +A +A L+ G+V Sbjct: 191 ADRADLAAWLTPLHHEHTAAAVEAERMVSRALGGSCEVPLAAYAEWHDGALHLRGVVATP 250 Query: 269 DGK 271 DG+ Sbjct: 251 DGR 253 >gi|253997747|ref|YP_003049810.1| porphobilinogen deaminase [Methylovorus sp. SIP3-4] gi|253984426|gb|ACT49283.1| porphobilinogen deaminase [Methylovorus sp. SIP3-4] Length = 320 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 154/289 (53%), Gaps = 2/289 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A ++ L ++ P + I+ ++T GD+I + L IGGKGLF +E Sbjct: 15 IASRESALAMWQARHIQARLQALY--PSTQVEILGMTTTGDQILDSPLARIGGKGLFVKE 72 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L G D AVHS KD+P L +G ++A RED RD F+S+ SL+ L S++ Sbjct: 73 LEQALADGRADLAVHSMKDVPMHLPEGFAMAAIGEREDPRDAFVSNDYPSLEALPAGSIV 132 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+ RL I + Sbjct: 133 GTSSLRRQSQLQARFPHLVIESLRGNLQTRLRKLDEGQYAAIILAAAGLIRLGLGNRIAQ 192 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + ED P+ GQGA+ IE + ++ +NH DT V ER L GSC Sbjct: 193 TIAPEDSIPAVGQGALGIEINAARTDLLTVLAPLNHADTAACVEAERGMSRALAGSCTVP 252 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + +A +G + +G V + DGK GN +G+ AQ + Sbjct: 253 LGAYATKQGENITIHGFVASVDGKQMLRAEATGNAAQPELLGQQLAQSL 301 >gi|300312229|ref|YP_003776321.1| porphobilinogen deaminase [Herbaspirillum seropedicae SmR1] gi|300075014|gb|ADJ64413.1| porphobilinogen deaminase protein [Herbaspirillum seropedicae SmR1] Length = 318 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 94/263 (35%), Positives = 144/263 (54%), Gaps = 2/263 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R L ++ P +I I+ +T+GD+I +R L+++GGKGLF +E Sbjct: 11 IVSRESRLAMWQAEYVRDRLAALY--PQCSISILGTTTRGDQILDRALSKVGGKGLFVKE 68 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E + G D AVH KDMP L +G +++A L RED RD F+S+ +L +L +V+ Sbjct: 69 LEVAMAEGRADLAVHCLKDMPMDLPEGFELAAILEREDPRDAFVSNDYAALDELPDGAVV 128 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A++ + V RG ++TRL KL+ AI+LA AG+ RL + I+ Sbjct: 129 GTSSLRRQAMIAARYPQLVVKPLRGNLDTRLAKLDRGDYAAIILAVAGLNRLGLKARIRS 188 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 L+ PSPGQG + IE + L+ ++ E ER+ SC+ Sbjct: 189 FLDPAQSLPSPGQGTLAIEIPEGREDIKRLLAPLHDEPAAVVSAAERSVSRIFGASCQIP 248 Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270 +A +A G L+ ++ DG Sbjct: 249 LAAYATLDGQRLHLRAMIATPDG 271 >gi|330817976|ref|YP_004361681.1| Porphobilinogen deaminase [Burkholderia gladioli BSR3] gi|327370369|gb|AEA61725.1| Porphobilinogen deaminase [Burkholderia gladioli BSR3] Length = 323 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 101/263 (38%), Positives = 148/263 (56%), Gaps = 2/263 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LAL A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 16 IASRESRLALWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L +G +S + RED RD F+S+ SL DL +++ Sbjct: 74 LENALADGRADLAVHSLKDVPMSLPEGFVLSTVMSREDPRDAFVSNDYASLDDLPTGAIV 133 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L D V RG ++TRL KL+ AI+LA AG+KRL I+ Sbjct: 134 GTSSLRREAMLRAHYLDFDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLGDRIRA 193 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 ++++E PP+ GQGA+ IE + + ++ T + ER L GSC Sbjct: 194 LIDVETSPPAAGQGALGIEIAASRTDVARWLAPLHDSATALAAEAERMVSRALGGSCSVP 253 Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270 +A A G L G V + G Sbjct: 254 LAAHAIWHGERLELTGRVSNTSG 276 >gi|299066045|emb|CBJ37226.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Ralstonia solanacearum CMR15] Length = 334 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 102/264 (38%), Positives = 152/264 (57%), Gaps = 3/264 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF +E Sbjct: 24 IASRESRLAMWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLFVKE 81 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P +L G +SA L RED RD F+S+ L L +V+ Sbjct: 82 LEVALAEGRADLAVHSLKDVPMELPPGFALSAILEREDPRDAFVSNDYADLAALPAGAVV 141 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A L + + RG ++TRL+KL+ AI+LA AG+KRL I+ Sbjct: 142 GTSSLRREASLRARFPHLVIQPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLSARIRA 201 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 ++ E P+ GQGA+ IE+ V+ Q + ++H T +V ERA +L GSC+ Sbjct: 202 VIAPETSLPAAGQGALGIESRVDRHDVQAWLAPLHHVPTTLAVTAERAVSRQLGGSCQVP 261 Query: 248 IAGFA-YCKGSTLYFYGIVLASDG 270 +A FA + L V + DG Sbjct: 262 LAAFAQWTDAGALRLRAFVASPDG 285 >gi|282165595|ref|YP_003357980.1| probable porphobilinogen deaminase [Methanocella paludicola SANAE] gi|282157909|dbj|BAI62997.1| probable porphobilinogen deaminase [Methanocella paludicola SANAE] Length = 303 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 101/266 (37%), Positives = 144/266 (54%), Gaps = 6/266 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA+A A + L+ + +I T GD T+ L + G G F Sbjct: 1 MRVGTRGSRLAMAQARKV-CGLLSERGVEASPAII---KTSGDVHTSEPLHAMKGVGAFV 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EI+ +L++GE+D AVHS KD+PTK +GL +A L RE DV ++ + L +L + Sbjct: 57 REIDDRLLAGEVDIAVHSLKDVPTKRPEGLATAAVLKRESALDVAVTREGKKLSELEEGA 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSS RR AL+ + + + RG ++TRL KL + AILLA AG+ RL + +I Sbjct: 117 VVGTSSTRRAALIKKHYPHLRTNNIRGNVDTRLRKLGEGEYDAILLAEAGLIRLGMD-II 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 KE L+ DF PS QG I I P+ + V +N DTW ERA + LDG C Sbjct: 176 KERLDPYDFVPSANQGVIAIVARPGTPEF-DAVSALNDHDTWLETGVERAIASALDGGCV 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK 271 + + +A +G L VL+ DG+ Sbjct: 235 APMGAYARLEGDGLDVVCEVLSLDGR 260 >gi|82703803|ref|YP_413369.1| porphobilinogen deaminase [Nitrosospira multiformis ATCC 25196] gi|82411868|gb|ABB75977.1| hydroxymethylbilane synthase [Nitrosospira multiformis ATCC 25196] Length = 321 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 110/290 (37%), Positives = 159/290 (54%), Gaps = 2/290 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A R L +++ P I ++T+GD+I + TL++IGGKGLF +E Sbjct: 12 IATRESALALWQANFIRDRLAELY--PQMEFQISGMTTRGDQILDVTLSKIGGKGLFIKE 69 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L G D AVHS KD+P + G ++A RED RD F+S+ L L SV+ Sbjct: 70 LEQALEDGRADIAVHSMKDVPMDMPAGFALAAITEREDPRDAFVSNKYARLDALPPGSVV 129 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL + I Sbjct: 130 GTSSLRRESQLRARFPHLQVQPLRGNVQTRLRKLDEGQFAAIILAAAGLKRLGLAERITA 189 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L+ + P+ GQGA+ IE + +L++ ++H T V ERA L GSC+ Sbjct: 190 LLSPDLSLPAVGQGALGIECRADRSDLIKLMEPLHHIPTARCVEAERAMSRALGGSCEVP 249 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + GFA G L G V + DG NG+ D +IG A+ ++ Sbjct: 250 LGGFAEIDGHVLRLRGFVASQDGIRMVSDELNGSPDDCASIGAQLAKNLK 299 >gi|152990765|ref|YP_001356487.1| porphobilinogen deaminase [Nitratiruptor sp. SB155-2] gi|166217777|sp|A6Q3S1|HEM3_NITSB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|151422626|dbj|BAF70130.1| porphobilinogen deaminase [Nitratiruptor sp. SB155-2] Length = 310 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 96/244 (39%), Positives = 141/244 (57%), Gaps = 9/244 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL + ++ L + + + TKGD+I + L IGGKGLFT+E Sbjct: 5 IATRGSKLALWQSNHIKAQLESFG----YEVELKIFKTKGDKILDTPLALIGGKGLFTKE 60 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E ++ GE D AVHS KD+PT+L +GL + A RE D +S ++L DL ++V+ Sbjct: 61 LEDAMLRGEADLAVHSLKDVPTELPEGLVLGAITKREMTNDSLLSEQYETLADLPPNAVV 120 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+SLRR+ LL R DI + D RG ++TR+NKL N + AI+LAYAG+KRL + ++ Sbjct: 121 GTTSLRRRMQLLHLRPDICIKDLRGNVDTRINKLKNGEFDAIILAYAGLKRLGILESVRY 180 Query: 188 ILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + I++ P+ GQ A+ IE P ++VK +N E + ER F+ L G C+ Sbjct: 181 VHPIDENTMIPAMGQAALGIECR---PDVVDVVKKLNDEKSAIETFIERDFIDRLQGGCQ 237 Query: 246 SAIA 249 I Sbjct: 238 VPIG 241 >gi|269119644|ref|YP_003307821.1| porphobilinogen deaminase [Sebaldella termitidis ATCC 33386] gi|268613522|gb|ACZ07890.1| porphobilinogen deaminase [Sebaldella termitidis ATCC 33386] Length = 297 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 105/301 (34%), Positives = 158/301 (52%), Gaps = 15/301 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG----KGL 63 +GTR S LA+A A + L + KIP + I + T GDR ++T T GG K + Sbjct: 6 MGTRGSVLAVAQAETVKKML--IEKIPGLTVEIKKIVTSGDR--DQT-TNWGGDSSLKSM 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE++L+ G ID AVHS KDMP +GL + + RED RDV +S ++ Sbjct: 61 FVKEIERELLEGTIDFAVHSMKDMPQISPEGLINACFPIREDNRDVLVSKNNTVFSEMPS 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SVIGTSSLRRK+ + ++ + RG I TRL KL++ + I+LA AG+ R E Sbjct: 121 GSVIGTSSLRRKSAVTELYPEMEIKPIRGNIHTRLGKLDSGEYDGIILAAAGLIRTGLES 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I E ++ E PP+P QG +C++ NN + E++K I+ +T ER F DG Sbjct: 181 RISEYIDPEKMPPAPAQGILCVQCRENNMEILEILKEIDDRETRIICEAEREFSRIFDGG 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C + + FA K ++ G+ + + F E +I ++AAQ + I + Sbjct: 241 CHTPMGCFAVIKEEEIFLKGMFCSGEKMYFGEAG------GSIEKPKEAAQKLAEIIRRQ 294 Query: 304 V 304 + Sbjct: 295 I 295 >gi|242309899|ref|ZP_04809054.1| porphobilinogen deaminase [Helicobacter pullorum MIT 98-5489] gi|239523196|gb|EEQ63062.1| porphobilinogen deaminase [Helicobacter pullorum MIT 98-5489] Length = 314 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 97/267 (36%), Positives = 152/267 (56%), Gaps = 3/267 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K IGTR S LAL A + +L + + + I+ TKGD+I + L +IGGKGL Sbjct: 2 KKIIIGTRGSVLALWQANFVKRALEEQYSNLEVELKIV--KTKGDKILDVPLAKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E+ ++ GEID AVHS KD+P + ++ L ++A RED+RD F+S +SL++L Sbjct: 60 FTKELEELMLKGEIDIAVHSLKDVPVEFVENLGLAAITKREDVRDSFLSFKYKSLEELPS 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GT+SLRR + R D+ I RG ++TRL +L AI+LA AG+ RL E Sbjct: 120 GAKVGTTSLRRVMQIHTLRKDLDCISLRGNVQTRLKRLKEGDFDAIILAQAGVNRLGIEN 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I I+ ++ P+ GQ A+ IE +++ K E++ +N + + ER F+ L+G Sbjct: 180 EIPYIIPLDFMIPAMGQAALGIECRMDS-KVVEMLDFLNDKKACFETSAEREFVRTLEGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG 270 C+ I A + + L ++ DG Sbjct: 239 CQVPIGVNANLENNLLSIKAVLGIPDG 265 >gi|281203457|gb|EFA77657.1| porphobilinogen deaminase [Polysphondylium pallidum PN500] Length = 324 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 107/271 (39%), Positives = 146/271 (53%), Gaps = 11/271 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LA+ SL ++H P I + T GDR+ N L++IG KGLFT+E Sbjct: 12 IGSRKSQLAMVQTESVMKSLQELH--PNLKFEIKTMDTVGDRVLNVALSKIGDKGLFTKE 69 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS-- 125 +E ++SG ID AVHS KD+PTK +GL + A RE+ D FI+H KD L S Sbjct: 70 LEDLMLSGHIDIAVHSLKDLPTKFPEGLSLGAITKRENCFDAFIAHPKYG-KDARLSSMP 128 Query: 126 ---VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH-AILLAYAGIKRLKK 181 VIG+SSLRR + L R + D RG + TR NKL + + ++LA AG++RL Sbjct: 129 EGAVIGSSSLRRVSQLKRAYPQLQFKDIRGNLNTRFNKLETSGEYDGMILAVAGLERLGW 188 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E+L E + GQGA+ IE ++ Q L+ +NH +T ERA L EL+ Sbjct: 189 TDRITEVLQPEVSLYAVGQGALGIECRSDDEFVQSLLAPLNHYETAQCCAAERAMLRELE 248 Query: 242 GSCKSAIAGFAYCK--GSTLYFYGIVLASDG 270 G C I + S L G+VL+ DG Sbjct: 249 GGCHVPIGVNTTLEQNNSILSIEGVVLSLDG 279 >gi|197121772|ref|YP_002133723.1| porphobilinogen deaminase [Anaeromyxobacter sp. K] gi|220916566|ref|YP_002491870.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-1] gi|196171621|gb|ACG72594.1| porphobilinogen deaminase [Anaeromyxobacter sp. K] gi|219954420|gb|ACL64804.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-1] Length = 314 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 148/291 (50%), Gaps = 3/291 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLA A L D + P + + L T+GD+I L ++GGKGLF Sbjct: 2 IRIATRRSPLAKWQANHVSQLLRD--REPGLEVRLHELVTRGDKILEVPLADVGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ + + AVHS KD+P L GL ++A RED RD S ++L L + Sbjct: 60 KEIEDALLNRDAEVAVHSMKDLPAVLAPGLVLAAVPQREDPRDALCSPRWKTLAALPKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR A L R D+ + RG +ETRL K + A++LAYAG++RL + Sbjct: 120 RVGTSSLRRSAQLKALRPDLQMEMVRGNVETRLRKASEG-LDAVVLAYAGLRRLGLAEHA 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + E+ P+ QGA+ +E ++ + + DT + ER FLA ++G C+ Sbjct: 179 TYVFPPEEMLPAVAQGALALEARADDAPTLARLAALEDPDTRVRIEAERGFLARIEGGCQ 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 IAG A G + +V + DG R G +A +G A + Sbjct: 239 VPIAGHATLAGGKVTIRALVASLDGARVIRGERTGAYAEARAMGESLADEL 289 >gi|330470294|ref|YP_004408037.1| porphobilinogen deaminase [Verrucosispora maris AB-18-032] gi|328813265|gb|AEB47437.1| porphobilinogen deaminase [Verrucosispora maris AB-18-032] Length = 336 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 107/317 (33%), Positives = 163/317 (51%), Gaps = 20/317 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + +L P + +I T GDR ++ + +G G+F Sbjct: 9 PLRLGTRGSKLAMAQSGHVAEALTARTGRPVELVEVI---TAGDR-SSAPVHRLG-VGVF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L++ EID AVHS KD+PT + GL I+A PRED RD ++ ++L +LA Sbjct: 64 VSALRDALVAREIDFAVHSYKDLPTAMPAGLHIAAVPPREDPRDALVARDGRTLAELAPG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLKKE 182 + IGT +LRR A L +SV RG I+TRL ++ A AI+LA AG+ R+ + Sbjct: 124 ASIGTGALRRIAQLHALGMQLSVSPIRGNIDTRLARVLGPDADLDAIVLARAGLARIGRL 183 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+P QGA+ +E V++P+ EL+ ++H + +V ERA LA L+ Sbjct: 184 DVITETLDPMLMLPAPAQGALAVECRVDDPEMVELLGTLDHAASRATVTAERAMLATLEA 243 Query: 243 SCKSAIA-------GFAYCKG------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 C + +A G G +Y G V++ DG +SR G DA IG Sbjct: 244 GCSAPVAAYAVVAEGEPTGSGVEGDVVQEIYLRGAVISPDGSRDIRLSRTGTLADAAEIG 303 Query: 290 RDAAQYIRFISNKNVFN 306 + A + + ++ Sbjct: 304 KALATELLDLGADSILG 320 >gi|217969858|ref|YP_002355092.1| porphobilinogen deaminase [Thauera sp. MZ1T] gi|217507185|gb|ACK54196.1| porphobilinogen deaminase [Thauera sp. MZ1T] Length = 310 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 99/290 (34%), Positives = 150/290 (51%), Gaps = 2/290 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A ++ L +H P + ++ ++T+GD+I +R L ++GGKGLF +E Sbjct: 11 IATRESRLALWQAEHIKARLEALH--PGCRVELLGMTTRGDQILDRPLAKVGGKGLFVKE 68 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L+ G D AVHS KD+P + + RE D F+S +SL D+ +V+ Sbjct: 69 LETALLDGRADIAVHSMKDVPMVMEPEFALPCITAREVPLDAFVSSRYESLADMPPGAVV 128 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR++ + + V RG ++TRL KL+ + AI+LA AG+ RL + I+ Sbjct: 129 GTSSLRRESQIHAQYPFLGVTSLRGNLDTRLRKLDEGQYDAIILAAAGLTRLGLGERIRS 188 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 ++ E P+ GQGA+ IE ++ + DT V ERA L GSC+ Sbjct: 189 VMPAEVSLPAAGQGALGIECLSARADVIGWLQPLVDADTTACVLAERAVARALAGSCEVP 248 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + +A + L+ G V DG R G +A +GR A +R Sbjct: 249 LGAYAVMREGRLWLRGFVARPDGSTIVRAEREGAPAEAEALGRALADDLR 298 >gi|258404816|ref|YP_003197558.1| porphobilinogen deaminase [Desulfohalobium retbaense DSM 5692] gi|257797043|gb|ACV67980.1| porphobilinogen deaminase [Desulfohalobium retbaense DSM 5692] Length = 311 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 94/249 (37%), Positives = 139/249 (55%), Gaps = 2/249 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + I TR S LAL A + L + + P + + + T+GD+I + L +IGGK L Sbjct: 2 RSLTIATRGSKLALWQANHIKGRLEE--RYPGIEVHLEVIKTQGDKILDVPLAKIGGKAL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ ++ G D AVHS KD+P +L +GL + RED D +S +L+++ Sbjct: 60 FVKEIEEAMLDGRADLAVHSMKDVPAELPEGLTLGVIPQREDYTDCLLSQHYTTLEEIPE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSSLRRK LLR R D+ + D RG ++TR+ KL AI++A AG++RL+ Sbjct: 120 GATIGTSSLRRKTQLLRLRPDLVIQDLRGNLDTRIRKLEEGMFDAIVVASAGLRRLQTGA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 L F P+ GQGA+ IE + +E++ ++H T V ERAFL L+G Sbjct: 180 RYMTELAPPQFLPAVGQGALGIEYPEDRKDLEEMLGFLDHPPTRFCVLTERAFLHRLEGG 239 Query: 244 CKSAIAGFA 252 C+ I G A Sbjct: 240 CQVPIGGHA 248 >gi|237752686|ref|ZP_04583166.1| porphobilinogen deaminase [Helicobacter winghamensis ATCC BAA-430] gi|229376175|gb|EEO26266.1| porphobilinogen deaminase [Helicobacter winghamensis ATCC BAA-430] Length = 310 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 100/267 (37%), Positives = 151/267 (56%), Gaps = 4/267 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + IGTR S LAL A ++ L + + P + + + TKGD+I + L +IGGKGL Sbjct: 2 QKLTIGTRGSVLALWQANHIKNLLEE--RYPKLEVELKIVKTKGDKILDVPLAKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E L+ G+ID AVHS KD+P + +GL ++A RED+RD F+S ++L DL Sbjct: 60 FTKELEVLLLEGDIDLAVHSLKDVPVEFTQGLGLAAITKREDVRDSFLSFKYKNLGDLPK 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GT+SLRR + R D+ RG ++TRL +L N + AI+LA AG+ RL+ K Sbjct: 120 GAKVGTTSLRRVMQINALRGDLDCQSLRGNVQTRLQRLENEEFDAIILAQAGVNRLEL-K 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I I ++ P+ GQ A+ IE + EL+ +N ++ +CERAF+ L+G Sbjct: 179 GIPYITPLDFMVPAMGQAALGIECK-KDSNYVELLSFLNDKNAVFETHCERAFVRVLNGG 237 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG 270 C+ I A +L I+ DG Sbjct: 238 CQVPIGINARYNEGSLEVRAILGLPDG 264 >gi|315925350|ref|ZP_07921561.1| hydroxymethylbilane synthase [Pseudoramibacter alactolyticus ATCC 23263] gi|315621251|gb|EFV01221.1| hydroxymethylbilane synthase [Pseudoramibacter alactolyticus ATCC 23263] Length = 309 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 106/298 (35%), Positives = 149/298 (50%), Gaps = 6/298 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +G+R S LA+ L H + II +TKGDR ++ L IG KGL Sbjct: 2 KKIVVGSRGSKLAVTQTNWLIERLAAAHPDIAFELKII--TTKGDRNQHQALDAIGDKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDLA 122 FT E+E +L+SGEI AVHS KDMP+ L +GL ++ RED DV ++ H A SL DL Sbjct: 60 FTAELEAELLSGEIQMAVHSMKDMPSALPEGLCLTVPPMREDPADVLVTPHGAASLDDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIG+ S RR L R D+ + RG I+TR+ KL + I+LA AG++RL Sbjct: 120 EGAVIGSGSKRRVFQLKALRPDLQTVGIRGNIDTRIRKLFDEHLDGIVLAAAGMRRLNVY 179 Query: 183 KVIKE---ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 L F P+P QG + +E +N + + L+ I+ E + ER+FL Sbjct: 180 DAADYHLVPLLPPAFVPAPAQGILAVEIREDNAEVKALMAAISDETARVQMAAERSFLTA 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 LDG C I + G + YG+ G + S G DA +G A+ +R Sbjct: 240 LDGDCHLPIGAYCEAAGDAITLYGLYGDEAGTRLVKGSAAGRAADAERLGAQLAEQLR 297 >gi|289423443|ref|ZP_06425247.1| hydroxymethylbilane synthase [Peptostreptococcus anaerobius 653-L] gi|289156201|gb|EFD04862.1| hydroxymethylbilane synthase [Peptostreptococcus anaerobius 653-L] Length = 307 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 108/298 (36%), Positives = 158/298 (53%), Gaps = 13/298 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIV--IIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LA+ ++D K NI I +STKGDRI +++L +IG KG+FT Sbjct: 5 VGTRGSKLAVTQT----KIVVDAIKSNFENIDVDIKIISTKGDRILDKSLDKIGDKGIFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE++LI GEID A+HS KDMP++L +GL ++ + RED RD+ I ++ D + Sbjct: 61 QEIERQLIEGEIDFAIHSLKDMPSELGEGLVLTKTIQREDPRDLLILNSKFKKIDDPIKW 120 Query: 126 V-------IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 + IGT S RR A LL ++ + RG I+TRL K+ AI+LA AG+ R Sbjct: 121 LKENDGMRIGTGSKRRSAQLLNINPNLKIDLIRGNIDTRLEKMEKESYDAIVLAAAGVNR 180 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 LK + + +L+ P+ GQGA+ IE N + + + I+ + V ER +LA Sbjct: 181 LKMDWINSYVLDEGSMIPAVGQGALAIEIKEGNQELVNIFEAISDDIANVCVEAERTYLA 240 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 ++G C + A L GI + D K+ S G DA IGR+ A I Sbjct: 241 TINGGCHMPVGALAQVNEGKLCLKGIYGSEDCKLIISSSLEGPLEDAQRIGRELADKI 298 >gi|113952874|ref|YP_731239.1| porphobilinogen deaminase [Synechococcus sp. CC9311] gi|122945597|sp|Q0I8I3|HEM3_SYNS3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|113880225|gb|ABI45183.1| porphobilinogen deaminase [Synechococcus sp. CC9311] Length = 316 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 103/300 (34%), Positives = 157/300 (52%), Gaps = 5/300 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALEHLRIASRRSQLAMVQTNWVKAELEKAH--PGLAISVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---S 117 KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + ++ + Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNSKNAEYT 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L S++GTSSLRR A L + D RG + TRL KL++ ++LA AG+ Sbjct: 119 LETLPEGSIVGTSSLRRLAQLRYHYPHLQFKDVRGNVITRLEKLDSGNYDCLILAAAGLS 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I + + + GQGA+ IE + P+ EL++V+NH T ERAFL Sbjct: 179 RLGFGDRIHQSIPGNISLHAVGQGALGIECVCDRPEVMELIQVLNHAPTSARCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L+G C+ I +G T+ G+V + DGK + G D +GRD A ++ Sbjct: 239 RVLEGGCQVPIGVNTQIEGDTIQLTGMVASLDGKRLIRDEQAGPLADPEAVGRDLAHKLK 298 >gi|331270186|ref|YP_004396678.1| porphobilinogen deaminase [Clostridium botulinum BKT015925] gi|329126736|gb|AEB76681.1| porphobilinogen deaminase [Clostridium botulinum BKT015925] Length = 300 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 108/294 (36%), Positives = 158/294 (53%), Gaps = 8/294 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + + H P N I +STKGDRI + L +IGGKGLF +E Sbjct: 5 VGSRGSKLALTQTNWVIDKIKENH--PQVNFEIKIISTKGDRIQHMPLDKIGGKGLFVQE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFI-SHTAQSLKDLALHS 125 IE++LI+G+ID AVHS KDM T + + L+ S Y+P RED RDV I + +S+ +L + Sbjct: 63 IEEQLINGQIDLAVHSMKDMSTDIPEELKFS-YVPVREDYRDVLILNKKYKSIDELPKGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 IGT S RRK LL +R+D+ ++ RG ++TR+ K+ I+LA AGIKRL E K+ Sbjct: 122 KIGTGSKRRKYQLLDYRNDLKIVPIRGNVDTRIKKIETENLDGIVLASAGIKRLGLEDKI 181 Query: 185 IKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I +E PSP QG + +E + ++K I E + ERAFL ++G Sbjct: 182 DYNIFYLEKDIMLPSPAQGILALEIKRGRKDLENILKSIEDEISTIQAEAERAFLKGVNG 241 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C I T+ G++ D + G+ +A IG + A+ + Sbjct: 242 GCHVPIGALCSINKDTVEVTGLLGKEDASKIVRKTLVGSIDEAEYIGYELAKIV 295 >gi|170783140|ref|YP_001711474.1| porphobilinogen deaminase [Clavibacter michiganensis subsp. sepedonicus] gi|169157710|emb|CAQ02912.1| porphobilinogen deaminase [Clavibacter michiganensis subsp. sepedonicus] Length = 328 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 92/283 (32%), Positives = 150/283 (53%), Gaps = 12/283 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LALA +TR+ ++ + ++P++T GD + +L+ +GG G+F Sbjct: 14 LRIGTRGSALALA---QTRAIAAEITGASGLEVELVPVTTHGD-TSRESLSSLGGTGVFA 69 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + L+ GE D VHS KD+PT GL +++ RED RDV + +L L + Sbjct: 70 SALRESLLRGECDLVVHSLKDLPTAPYAGLTVASVPVREDPRDVLCARDGLTLATLPRGA 129 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT S RR+A +L R D+ V+D RG I+TRL+++ A++LA AG++R+ + Sbjct: 130 RVGTGSPRRRAQILAERPDLDVVDIRGNIDTRLSRVTAGDLDAVVLAAAGLERIDRIGAA 189 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQEL----VKVINHEDTWDSVNCERAFLAELD 241 E L ++ +P +PGQGA+ +E + + + V+ ++ T +V ER LA L+ Sbjct: 190 TEHLELDRWPTAPGQGALALEIRTEDAETHSVVGRAVEAVDDPFTHAAVLAERGVLAALE 249 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG----KIFHEVSRNG 280 C + I +A + L +V DG HE+ G Sbjct: 250 AGCAAPIGAWATVTSARLALTAVVYRPDGTQRMAASHELDTAG 292 >gi|148271775|ref|YP_001221336.1| porphobilinogen deaminase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829705|emb|CAN00621.1| hemC [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 328 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 92/283 (32%), Positives = 150/283 (53%), Gaps = 12/283 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LALA +TR+ ++ + ++P++T GD + +L+ +GG G+F Sbjct: 14 LRIGTRGSALALA---QTRAIAAEITGASGLEVELVPVTTHGD-TSRESLSSLGGTGVFA 69 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + L+ GE D VHS KD+PT GL +++ RED RDV + +L L + Sbjct: 70 SALRESLLRGECDLVVHSLKDLPTAPYAGLTVASVPVREDPRDVLCARDGLTLATLPRGA 129 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT S RR+A +L R D+ V+D RG I+TRL+++ A++LA AG++R+ + Sbjct: 130 RVGTGSPRRRAQILAERPDLDVVDIRGNIDTRLSRVTAGDLDAVVLAAAGLERIGRIDAA 189 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQEL----VKVINHEDTWDSVNCERAFLAELD 241 E L ++ +P +PGQGA+ +E + + + V+ ++ T +V ER LA L+ Sbjct: 190 TEHLELDRWPTAPGQGALALEIRTEDAETHSVVGRAVEAVDDPFTHAAVLAERGVLAALE 249 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG----KIFHEVSRNG 280 C + I +A + L +V DG HE+ G Sbjct: 250 AGCAAPIGAWATVTSARLALTAVVYRPDGTQRMAASHELDTAG 292 >gi|242015312|ref|XP_002428308.1| Porphobilinogen deaminase, putative [Pediculus humanus corporis] gi|212512893|gb|EEB15570.1| Porphobilinogen deaminase, putative [Pediculus humanus corporis] Length = 356 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 103/270 (38%), Positives = 150/270 (55%), Gaps = 6/270 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++G+R S LAL+ + L + P I+ + T GD+I ++ L +IG K LFT Sbjct: 7 LKVGSRKSQLALSQTQIIVNQLKE--NFPDLKFDIVTMLTTGDKILDKPLPKIGEKSLFT 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD---LA 122 +E+E L E+D VHS KD+PT L L I A L RED RD + + + K+ L Sbjct: 65 KELEAALEKNEVDFVVHSLKDLPTSLPPNLTIGAILKREDPRDALVVNKNLNFKNVSSLP 124 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181 SVIGTSSLRR A L R ++ V + RG + TRL KL+ +K I+LA AG+KRLK Sbjct: 125 ESSVIGTSSLRRCAQLCRNYPNLKVENIRGNLNTRLKKLDEGDKYTGIVLAAAGLKRLKY 184 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I +IL + + GQGA+ +E + NN K ++++V+N T V ER+FL L Sbjct: 185 DDRITQILEPNEMLYAVGQGALAVECNKNNEKVLDILEVLNDHSTILRVIAERSFLKTLG 244 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 G C + +A + LY G V + +G+ Sbjct: 245 GGCSAPVAVSTKLEEKELYLTGAVWSLNGE 274 >gi|126348046|emb|CAJ89766.1| putative porphobilinogen deaminase [Streptomyces ambofaciens ATCC 23877] Length = 311 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 145/291 (49%), Gaps = 6/291 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT Sbjct: 7 IRIVSRDSPMALAQVERVRAGLAALH--PGVRTEVVPVKTTGDKWLG-DLSQVEGKGAFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L+S E D AVH KD+P L G +A+L R+D+RD I +L +L Sbjct: 64 KEVDAALLSDEADLAVHCVKDVPADRPLPAGTVFAAFLERDDVRDALIHPDGLTLDELPA 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSS+RR A L + + FRG RL KL +A A+LLA AG++R+ + Sbjct: 124 GTRVGTSSVRRVAQLAATHPHLRCVPFRGNANRRLAKLAAGEADALLLAVAGLERIGRRD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI E+L+ E P G G + ++ + E V + H T + ER FL L G Sbjct: 184 VISEVLSPETMMPPIGAGILALQCREGDTDLIEAVSGLGHPATHREASAERMFLHVLQGH 243 Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 C S IAG+A +G L V DGK R D +G A Sbjct: 244 CNSPIAGYARVDRGGELSLRACVFTPDGKTRLNAHEWAGRLDPATLGTSVA 294 >gi|48477321|ref|YP_023027.1| porphobilinogen deaminase [Picrophilus torridus DSM 9790] gi|55976421|sp|Q6L2G8|HEM3_PICTO RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|48429969|gb|AAT42834.1| porphobilinogen deaminase [Picrophilus torridus DSM 9790] Length = 282 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 99/259 (38%), Positives = 146/259 (56%), Gaps = 8/259 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+ A + L D I + ++KGD + L IGG G+F Sbjct: 3 IRIGTRSSKLAMIQAMMVKDRL-DSLGIETE---VKGFTSKGDINLDSPLYSIGGTGVFV 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +++ + ++ EID AVHSAKD+P+ + L+ISA L R+D RDV IS SL DL S Sbjct: 59 DDLNRMILKNEIDIAVHSAKDIPSFIDDSLEISAVLKRDDPRDVLISQ--HSLNDLEASS 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSSLRR L R+DI + D RG I+TRL KL+N I++A A R++ + Sbjct: 117 VIGTSSLRRIKELKTLRNDILIKDLRGNIDTRLKKLDNGDYDGIIMAKAAYDRMRINRR- 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ILN +DF P+P QG I I + + + +++K IN ++T++ + ER L+ L+ C Sbjct: 176 HFILNYDDFVPAPNQGIIAIISK-KDSEINDVLKKINDDETYNDMKAERLILSGLNLGCS 234 Query: 246 SAIAGFAYCKGSTLYFYGI 264 + +A+ + FY + Sbjct: 235 KPVGIYAHKNRIFMRFYSL 253 >gi|222529189|ref|YP_002573071.1| porphobilinogen deaminase [Caldicellulosiruptor bescii DSM 6725] gi|222456036|gb|ACM60298.1| porphobilinogen deaminase [Caldicellulosiruptor bescii DSM 6725] Length = 290 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 100/294 (34%), Positives = 149/294 (50%), Gaps = 6/294 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIG R S L+ + I +P+ TKGD ++L + G+ Sbjct: 2 KKLRIGARDSKLSRIQVDIVARKIKQTLGIECE---FVPIKTKGDIDKTKSLKDFQSPGV 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L+S EID AVHS KD+P ++ I A + RED RDV +S L Sbjct: 59 FVKEIELALLSREIDLAVHSLKDLPCEMDSNFDIVAVVEREDPRDVLVSKDGVGFYQLKP 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++ IGTSSLRR+ L R DI V++ RG IETRL+K+ + ++LAYA +KRL + Sbjct: 119 NAKIGTSSLRREVHLKNLREDIQVVNIRGNIETRLSKIESEGLDGVVLAYAALKRLNLDS 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + + +I + P PGQGAICIE ++P L K IN + + ER L L G Sbjct: 179 HVSYVFDINEITPCPGQGAICIECLEDSPYKSILSK-INDVNAYIQTQFERLVLKLLGGG 237 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C S+I F +Y + +L D + + S G++ D +++ + ++ Sbjct: 238 CHSSIGVFCKTDQDKIYAFASLLRGDKLV--KASIEGDKADFLSLANKLSNMLK 289 >gi|116072875|ref|ZP_01470140.1| porphobilinogen deaminase [Synechococcus sp. BL107] gi|116064401|gb|EAU70162.1| porphobilinogen deaminase [Synechococcus sp. BL107] Length = 317 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 104/308 (33%), Positives = 155/308 (50%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLTITVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---S 117 KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + H + Sbjct: 59 KGLFTKELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVLHAKNKHLN 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L +V+GTSSLRR A L + D RG + TRL KL++ ++LA AG+ Sbjct: 119 LATLPEGAVVGTSSLRRLAQLRHHYPHLEFKDVRGNVITRLEKLDSGAYDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I + + + + GQGA+ IE N P+ +++KV+ H T ERAFL Sbjct: 179 RLGFADRIDQSIPGDISLHAVGQGALGIECVENKPEVMDIIKVLEHGPTSQRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I +G L G+V + DGK +G D +IG A ++ Sbjct: 239 RELEGGCQVPIGVNTRFEGDQLILTGMVASLDGKRLIREKASGPSTDPESIGLALATTLK 298 Query: 298 FISNKNVF 305 + + Sbjct: 299 GLGAGEIL 306 >gi|294637953|ref|ZP_06716220.1| hydroxymethylbilane synthase [Edwardsiella tarda ATCC 23685] gi|291088885|gb|EFE21446.1| hydroxymethylbilane synthase [Edwardsiella tarda ATCC 23685] Length = 230 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 89/209 (42%), Positives = 122/209 (58%), Gaps = 2/209 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++ RI TR SPLAL A R L+ P I ++P+ T+GD + + L ++GGKG Sbjct: 19 QQTLRIATRQSPLALWQAHYVRDQLLT--HWPQLTIELVPMVTRGDVLLDTPLAKVGGKG 76 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ G D AVHS KD+P GL + PRED RD F+S SL L Sbjct: 77 LFVKELELALLEGRADIAVHSMKDVPVAFPDGLGLVTICPREDPRDAFVSPHFASLDQLP 136 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+ E Sbjct: 137 PGSIVGTSSLRRQCQLRAARPDLQIRDLRGNVGTRLAKLDAGEYDAIILAAAGLKRLQLE 196 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNN 211 I+ L E P+ GQGA+ IE + + Sbjct: 197 ARIRTPLTAEQSLPAVGQGAVGIECRLAD 225 >gi|91774391|ref|YP_544147.1| porphobilinogen deaminase [Methylobacillus flagellatus KT] gi|123253776|sp|Q1GXA1|HEM3_METFK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|91708378|gb|ABE48306.1| hydroxymethylbilane synthase [Methylobacillus flagellatus KT] Length = 310 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 103/277 (37%), Positives = 151/277 (54%), Gaps = 2/277 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LA+ A + L ++ P + I+ ++T GD+I + L IGGKGL Sbjct: 5 KTLVIASRESALAMWQAQYIQGRLQTLY--PETEVTILGMTTTGDQILDSPLARIGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ L G D AVHS KD+P L G ++A R+D RD F+S+ +L L Sbjct: 63 FVKELEQALADGRADLAVHSMKDVPMHLPPGFALAAISERDDPRDAFVSNDYPNLASLPA 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S++GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL Sbjct: 123 GSIVGTSSLRRQSQLQARFPGLKVESLRGNLQTRLRKLDEGQYAAIILAAAGLKRLGLAS 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+E ++ ++ P+ GQGA+ IE + +++ +NH +T V ER L GS Sbjct: 183 RIRESIDPDNSIPAVGQGALGIEINAERLDLLKVLAPLNHPETAACVEAERGMSRALAGS 242 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 C+ + FA G TL G V + DGK F S G Sbjct: 243 CQVPLGAFAQQHGDTLQMTGFVASIDGKEFLRESVQG 279 >gi|304317047|ref|YP_003852192.1| porphobilinogen deaminase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778549|gb|ADL69108.1| porphobilinogen deaminase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 297 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 98/254 (38%), Positives = 147/254 (57%), Gaps = 6/254 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKG 62 K R+GTR S LAL +T + ++ K P+ I+ +STKGD + N L+EIGGKG Sbjct: 2 KKIRVGTRSSELALT---QTLIVINEIKKYKPNIEFEIVKISTKGDSVLNAPLSEIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE LI+ EID AVHS KDMP ++ L++ + RED RDVFIS + + + DL Sbjct: 59 LFVKEIEDALINNEIDMAVHSMKDMPYEVPNDLKLLSVYRREDPRDVFISRSEKFI-DLK 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ IGTSSLRR L R DI ++ RG I TR+ K++ I+LA +GIKRL E Sbjct: 118 NNARIGTSSLRRSVQLKNLRPDIEIVPIRGNIATRIKKMHELNLDGIVLAASGIKRLGLE 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +IK+ ++ P+P QG + +E + + E+ ++ T+ + ER + + Sbjct: 178 DMIKDYFPVDLIVPAPCQGILAVEIRRDFEEEFFEIYPMLLDAKTFFESSAERKIMKKFG 237 Query: 242 GSCKSAIAGFAYCK 255 G+CK + ++ K Sbjct: 238 GNCKIPLGIYSEYK 251 >gi|187929644|ref|YP_001900131.1| porphobilinogen deaminase [Ralstonia pickettii 12J] gi|309781590|ref|ZP_07676324.1| hydroxymethylbilane synthase [Ralstonia sp. 5_7_47FAA] gi|187726534|gb|ACD27699.1| porphobilinogen deaminase [Ralstonia pickettii 12J] gi|308919565|gb|EFP65228.1| hydroxymethylbilane synthase [Ralstonia sp. 5_7_47FAA] Length = 338 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 104/264 (39%), Positives = 151/264 (57%), Gaps = 3/264 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LAL A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF +E Sbjct: 28 IASRESRLALWQAEHVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLFVKE 85 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P +L +G +SA L RED RD FIS+ L L +V+ Sbjct: 86 LEVALAEGRADLAVHSLKDVPMELPEGFALSAILEREDPRDAFISNDYADLASLPAGAVV 145 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A L + + RG ++TRL KL+ AI+LA AG+KRL I+ Sbjct: 146 GTSSLRREASLRARFPHLVIQPLRGNLDTRLGKLDRGDYAAIILAAAGLKRLGLVDRIRS 205 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + E+ P+ GQGA+ IE + + + ++ E T +V ERA L GSC+ Sbjct: 206 TIAPEESLPAAGQGALGIEIRADRADVRACLAPLHDEPTALAVTAERAVSRILGGSCQVP 265 Query: 248 IAGFA-YCKGSTLYFYGIVLASDG 270 +A FA + G TL V + DG Sbjct: 266 LASFAQWSDGGTLRLRAFVASQDG 289 >gi|159036094|ref|YP_001535347.1| porphobilinogen deaminase [Salinispora arenicola CNS-205] gi|157914929|gb|ABV96356.1| porphobilinogen deaminase [Salinispora arenicola CNS-205] Length = 322 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 151/292 (51%), Gaps = 11/292 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + + +L P + ++ + T GDR + G G+F Sbjct: 4 PLRLGTRGSALAMAQSGQVAQALTAATGNP---VELVEVVTAGDR--SAAPVHRLGVGVF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L + ID AVHS KD+PT GL ++A PR+D RD ++ ++L +L Sbjct: 59 VSALRDALTARTIDFAVHSFKDLPTAAAPGLHVAAVPPRQDPRDALVARAGRTLAELPPG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLKKE 182 + +GT +LRR A L + V RG + TRL ++ +A A++LA AG+ RL + Sbjct: 119 ARVGTGALRRIAQLHALGLQLDVQPIRGNVGTRLARVLGPEADLDAVVLARAGLARLDRT 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E L+ P+P QGA+ +E ++ EL+ V++H + +V ERA LA L+ Sbjct: 179 DTITETLDPMLMLPAPAQGALAVECRSDDSDLVELLAVLDHAPSRATVVAERALLATLEA 238 Query: 243 SCKSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 C + +A +A G +Y G V++ DG +SR G DA+ IG+ Sbjct: 239 GCSAPVAAYAELAEGDVGEEIYLRGAVISPDGTRDLRLSRTGTPADAVEIGK 290 >gi|313680762|ref|YP_004058501.1| hydroxymethylbilane synthase [Oceanithermus profundus DSM 14977] gi|313153477|gb|ADR37328.1| hydroxymethylbilane synthase [Oceanithermus profundus DSM 14977] Length = 303 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 105/300 (35%), Positives = 153/300 (51%), Gaps = 10/300 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHK-IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +GTR S LAL +TR ++ + + P I + TKGDR + I F Sbjct: 6 VGTRGSLLALT---QTRWAVERLKENWPETEFKIKTIQTKGDRGADPREQNI-----FVG 57 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDLALHS 125 E+E+ L GEID AVHS KD+PT +GL I+ R D RDVFI ++ + DL + Sbjct: 58 ELEEALRRGEIDIAVHSLKDLPTTQPEGLVIAGVPRRVDPRDVFIGRNSVARMADLPKGA 117 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS+RR+A LL WR D+ ++ RG +++RL +L + I+LA AG+ RL+ I Sbjct: 118 RIGTSSVRRRAQLLAWRDDLEIVPLRGNVDSRLKRLVSEDLDGIILAAAGLLRLEMRNRI 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E ++ E P+PGQGA+ +E + A EL +NH T V ER FL L C Sbjct: 178 GEFVDPEILLPAPGQGALALEVREGDDMADELAYSLNHAPTRARVLAERGFLHGLGAGCL 237 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + + A + L VL+ DGK G+ +A +G + A+ + + V Sbjct: 238 APVGALAQIEDDVLVLDAGVLSLDGKTLIRGEIEGDPEEAWELGLELARDVLEAGGREVL 297 >gi|158337071|ref|YP_001518246.1| porphobilinogen deaminase [Acaryochloris marina MBIC11017] gi|158307312|gb|ABW28929.1| porphobilinogen deaminase [Acaryochloris marina MBIC11017] Length = 314 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 104/295 (35%), Positives = 148/295 (50%), Gaps = 5/295 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LAL + L P + + +ST+GD I + L +IG KGLFT Sbjct: 2 IRIGSRKSQLALVQTHWVQGELQK--HFPEYEFEVCTMSTQGDNILDVALAKIGDKGLFT 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDLA 122 +E+E ++ E D AVHS KD+PT L +GL + R D D + H A L L Sbjct: 60 KELEVSMLRKETDLAVHSLKDLPTNLPEGLCLGVVTERVDPADALVVHENFKAYQLDTLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR A L + D RG + TRL KL+ + I+LA AG++RL Sbjct: 120 EGAVIGTSSLRRLAQLRYNYPHLEFKDIRGNLNTRLQKLDEGEYDGIILAVAGLQRLGFG 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I +++ + GQGA+ IE + + +K + HE + ER+FL EL+G Sbjct: 180 DRIHQVIPANISLHAVGQGALGIECREGDEEIMAFIKALEHEPSAHRCTAERSFLHELEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C+ I K L G+V + DGK + + +G A +G D AQ +R Sbjct: 240 GCQVPIGVNTSLKEGQLTLVGMVASLDGKRLIKDTVSGPIASATQLGIDLAQKVR 294 >gi|86158914|ref|YP_465699.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-C] gi|85775425|gb|ABC82262.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-C] Length = 314 Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 99/291 (34%), Positives = 150/291 (51%), Gaps = 3/291 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLA A L D + P + + L T+GD+I L ++GGKGLF Sbjct: 2 IRIATRRSPLAKWQANHVSQLLRD--REPGLEVRLHELVTRGDKILEVPLADVGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ + + AVHS KD+P L GL +++ RED RD S ++L L + Sbjct: 60 KEIEDALLNRDAEVAVHSMKDLPAVLAPGLVLASVPQREDPRDALCSPRWKTLAALPKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR A L R D+ + RG +ETRL K + A++LAYAG++RL + Sbjct: 120 RVGTSSLRRSAQLKALRPDLQMEVVRGNVETRLRKASEG-LDAVVLAYAGLRRLGLAEHA 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + E+ P+ QGA+ +E ++ + + + +T + ER FLA ++G C+ Sbjct: 179 TYVFPPEEMLPAVAQGALALEARADDAPTLKRLAALEDPETRVRIEAERGFLARIEGGCQ 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 IAG A G + +V + DG R G +A +G A+ + Sbjct: 239 VPIAGHATLAGGKITIRALVASLDGTRVIRGERTGAYAEARALGESLAEEL 289 >gi|283955967|ref|ZP_06373457.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 1336] gi|283792627|gb|EFC31406.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 1336] Length = 307 Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 96/266 (36%), Positives = 148/266 (55%), Gaps = 6/266 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL + L + H+I +++ TKGD + + L +IGGKGLFT+E Sbjct: 5 IATRKSQLALWQSEHVAQILKNTHQI---EVLLEGFKTKGDVLLDSPLAKIGGKGLFTKE 61 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L + I Sbjct: 62 LEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKGAKI 121 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+SLRRK +L R D+ +I RG + +R+ KL NN+ AI+LA AGIKRL +K + Sbjct: 122 GTTSLRRKMQILLLRPDLEIISLRGNVNSRIEKLKNNEFDAIILAMAGIKRLNLDKQVNF 181 Query: 188 ILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ P+ QGA+ IE+ +N+ K EL+K +N E+ + ER F+A L+G C+ Sbjct: 182 VYGFSKDELIPAASQGALGIES-INDEKILELLKCLNDENALIETSIEREFIATLEGGCQ 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK 271 I A G + ++ DG+ Sbjct: 241 VPIGINAELLGDEICVRAVLGLPDGR 266 >gi|325266571|ref|ZP_08133248.1| hydroxymethylbilane synthase [Kingella denitrificans ATCC 33394] gi|324982014|gb|EGC17649.1| hydroxymethylbilane synthase [Kingella denitrificans ATCC 33394] Length = 313 Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 157/294 (53%), Gaps = 7/294 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A ++ L ++ P + I+ ++T+GD+I ++TL++IGGKGLF Sbjct: 7 LTIASRESALAMWQAEHIQAKLQALY--PSCTVDILGMTTQGDQILDKTLSKIGGKGLFI 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L D AVHS KD+P L +G + A R + D +S+ + L++L + Sbjct: 65 KELETALQENRADLAVHSLKDVPMDLPEGFVLVAVGERANPFDALVSNRFERLEELPEGA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+A L + V RG ++TRL KL+N AI+LA AG++RL+ I Sbjct: 125 VVGTSSLRREAQLRARFPHLQVKPLRGNVQTRLAKLDNGDYDAIILAAAGLERLQLHGRI 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + +L D P+ GQGA+ IE + +++ +NH T V ERA L GSC+ Sbjct: 185 RNLLPPSDSLPAAGQGALGIEIAAHRTDLVDILLPLNHAQTAACVTAERALARALGGSCQ 244 Query: 246 SAIAGFAYCKG---STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + AYC L +G+V DG + + A +GR A+ + Sbjct: 245 VPLG--AYCTADEYGLLTLHGLVAHPDGSVVMTANAQAPAPYADALGRAVAKKL 296 >gi|37522781|ref|NP_926158.1| porphobilinogen deaminase [Gloeobacter violaceus PCC 7421] gi|55976479|sp|Q7NGF7|HEM3_GLOVI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|35213783|dbj|BAC91153.1| porphobilinogen deaminase [Gloeobacter violaceus PCC 7421] Length = 328 Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 108/304 (35%), Positives = 155/304 (50%), Gaps = 7/304 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL R L H P I+ + T+GD+I + L +IG KGLFT+E Sbjct: 7 IGSRDSQLALVQTHWVRDELQRAH--PDIRFEIVEMKTQGDKILDVALAKIGDKGLFTKE 64 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLALH 124 +E ++ D AVHS KD+PT L GL + A RED D I A L DL Sbjct: 65 LESAMLEKRTDLAVHSLKDLPTALPPGLILGAITEREDPSDAVIVRRGLEAAGLADLPEG 124 Query: 125 SVIGTSSLRRKALLL-RWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR A L + + D RG + TRL KL+ + AI+LA AG++RL + Sbjct: 125 AVVGTSSLRRLAQLKHHYGERLRFQDIRGNLNTRLRKLDEGRYDAIVLAVAGMRRLGWSE 184 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I E+L+ + + GQGA+ IE + + +L+ V+NH T ERA L L+G Sbjct: 185 RISEVLSPDISLHAVGQGALGIECREADGEILDLLTVLNHPPTARRCRAERAMLRALEGG 244 Query: 244 CKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I + S L GIV + DG+ R+G +GR A+ ++ + Sbjct: 245 CQVPIGVYTELDDSGRLTLQGIVASLDGRNMARACRSGPGDAPEALGRAVAEDLKAAGAQ 304 Query: 303 NVFN 306 + + Sbjct: 305 AILD 308 >gi|254525987|ref|ZP_05138039.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9202] gi|221537411|gb|EEE39864.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9202] Length = 318 Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 103/296 (34%), Positives = 157/296 (53%), Gaps = 5/296 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +I +R S LA+ + L IP ++ I ++T+GD+I + L +IG KGLFT Sbjct: 6 LKIASRRSKLAMVQTLWVKDQLE--RNIPNLDVSIEAMATQGDKILDVALAKIGDKGLFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122 +E+E +++ G D AVHS KD+PT L GL++ RED D + + L+ L Sbjct: 64 KELEAQMLVGHADIAVHSLKDLPTNLPTGLKLGCITKREDPADALVVSKKNDCYKLETLP 123 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S++GTSSLRR A L + D RG + TR+ KL+ + I+LA AG+KRL E Sbjct: 124 EGSIVGTSSLRRLAQLRNKYPHLVFKDIRGNVITRIEKLDAGEFDCIILAAAGLKRLGFE 183 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I +I+ E + GQGA+ IE ++ K E++ V+ + T ERAFL EL+G Sbjct: 184 SRIHQIIPSEISLHAVGQGALGIECKSDDKKVLEIINVLEDKPTSQRCLAERAFLRELEG 243 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C+ I + LY G+V + DGK + GN + +G + A+ ++F Sbjct: 244 GCQVPIGVNSNIDNGQLYLTGMVASLDGKKLIKDQVIGNINNPELVGIELAKRLKF 299 >gi|317969656|ref|ZP_07971046.1| porphobilinogen deaminase [Synechococcus sp. CB0205] Length = 317 Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 105/300 (35%), Positives = 152/300 (50%), Gaps = 5/300 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ R L H I I ++T+GD+I + L +IG Sbjct: 1 MAGSQLRIASRRSQLAMVQTHWVRDELAKAH--AGLEITIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + H K Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVHEKHKDKT 118 Query: 121 LAL---HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 LA +V+GTSSLRR A L ++ D RG + TRL KL++ + ++LA AG+ Sbjct: 119 LATLPEGAVVGTSSLRRLAQLRHHYPHLTFKDVRGNVITRLEKLDSGEFDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I E+++ + GQGA+ IE + K E +KV+ H T ERAFL Sbjct: 179 RLGLSDRIHELIDPSISLHAVGQGALGIECRDGDAKVLEQIKVLEHVPTARRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I +G L G+V + DGK G++ + +G D A ++ Sbjct: 239 RELEGGCQVPIGVNTRFEGDELVLTGMVASLDGKRLIRDQVQGDQTNPEALGIDLAHKLK 298 >gi|157414826|ref|YP_001482082.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 81116] gi|172047086|sp|A8FKW8|HEM3_CAMJ8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157385790|gb|ABV52105.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 81116] gi|307747464|gb|ADN90734.1| Porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni M1] gi|315931740|gb|EFV10695.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 327] Length = 307 Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 97/265 (36%), Positives = 146/265 (55%), Gaps = 6/265 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL + L + H+I +++ TKGD + + L +IGGKGLFT+E Sbjct: 5 IATRKSQLALWQSEHVAQILKNTHQI---EVLLEGFKTKGDVLLDSPLAKIGGKGLFTKE 61 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L + I Sbjct: 62 LEESMLRKEAHLAVHSLKDVPSFFPRGLVLAAVSKREQSNDAMLSQNYKDFLSLPKGAKI 121 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+SLRRK LL R D+ +I RG + +R+ KL NN AI+LA AGIKRL +K + Sbjct: 122 GTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQVNF 181 Query: 188 ILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ P+ QGA+ IE+ +N+ K EL+K +N E+ + ER F+A L+G C+ Sbjct: 182 VYEFSKDELIPAASQGALGIES-INDEKILELLKCLNDENALIETSIEREFIATLEGGCQ 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270 I A G + ++ DG Sbjct: 241 VPIGINAELLGDEICVRAVLGLPDG 265 >gi|148238945|ref|YP_001224332.1| porphobilinogen deaminase [Synechococcus sp. WH 7803] gi|147847484|emb|CAK23035.1| Porphobilinogen deaminase [Synechococcus sp. WH 7803] Length = 319 Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 103/300 (34%), Positives = 158/300 (52%), Gaps = 5/300 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 3 MALEHLRIASRRSQLAMVQTNWVKAELEKAH--PGLAISVEAMATQGDKILDVALAKIGD 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117 KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + ++ + Sbjct: 61 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNSKNAEHT 120 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L SV+GTSSLRR A L + D RG + TRL KL+ + ++LA AG+ Sbjct: 121 LETLPEGSVVGTSSLRRLAQLRHHFPHLQFKDVRGNVITRLEKLDAGQYDCLILAAAGLS 180 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +I+ + GQGA+ IE + P+ ++++V+ H T ERAFL Sbjct: 181 RLGFGDRIHQIIPGHISLHAVGQGALGIECVCDRPEVLKIIQVLEHAPTAGRCLAERAFL 240 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + G+ L G+V + DG+ R G+ D IGR A ++ Sbjct: 241 RELEGGCQVPIGVNSRIDGTELILTGMVASLDGQRLIRDERRGSLTDPEAIGRALAADLK 300 >gi|86148990|ref|ZP_01067222.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni CF93-6] gi|86153229|ref|ZP_01071433.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni HB93-13] gi|88597145|ref|ZP_01100381.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 84-25] gi|218562197|ref|YP_002343976.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|12643831|sp|Q9PHW9|HEM3_CAMJE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|85840348|gb|EAQ57605.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni CF93-6] gi|85842955|gb|EAQ60166.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni HB93-13] gi|88190834|gb|EAQ94807.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 84-25] gi|112359903|emb|CAL34691.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315927042|gb|EFV06397.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315928698|gb|EFV07978.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 305] Length = 307 Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 97/265 (36%), Positives = 146/265 (55%), Gaps = 6/265 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL + L + H+I +++ TKGD + + L +IGGKGLFT+E Sbjct: 5 IATRKSQLALWQSEHVAQILKNTHQI---EVLLEGFKTKGDVLLDSPLAKIGGKGLFTKE 61 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L + I Sbjct: 62 LEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKGAKI 121 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+SLRRK LL R D+ +I RG + +R+ KL NN AI+LA AGIKRL +K + Sbjct: 122 GTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQVNF 181 Query: 188 ILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ P+ QGA+ IE+ +N+ K EL+K +N E+ + ER F+A L+G C+ Sbjct: 182 VYEFSKDELIPAASQGALGIES-INDEKILELLKCLNDENALIETSIEREFIATLEGGCQ 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270 I A G + ++ DG Sbjct: 241 VPIGINAELLGDEICVRAVLGLPDG 265 >gi|313199811|ref|YP_004038469.1| porphobilinogen deaminase [Methylovorus sp. MP688] gi|312439127|gb|ADQ83233.1| porphobilinogen deaminase [Methylovorus sp. MP688] Length = 320 Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 153/289 (52%), Gaps = 2/289 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A ++ L ++ P + I+ ++T GD+I + L IGGKGLF +E Sbjct: 15 IASRESALAMWQARHIQARLQALY--PSTQVEILGMTTTGDQILDSPLARIGGKGLFVKE 72 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L G D AVHS KD+P L +G ++A RED RD F+S+ SL+ L S++ Sbjct: 73 LEQALADGRADLAVHSMKDVPMHLPEGFAMAAIGEREDPRDAFVSNDYPSLEALPAGSIV 132 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+ RL I + Sbjct: 133 GTSSLRRQSQLQARFPHLVIESLRGNLQTRLRKLDEGQYAAIILAAAGLIRLGLGNRIAQ 192 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + ED P+ GQGA+ IE + ++ +NH DT V ER L GSC Sbjct: 193 TIAPEDSIPAVGQGALGIEINAARTDLLTVLAPLNHADTAACVEAERGMSRALAGSCTVP 252 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + +A G + +G V + DGK GN +G+ AQ + Sbjct: 253 LGAYATKLGENITIHGFVASVDGKQMLRAEATGNAAKPELLGQQLAQSL 301 >gi|260435886|ref|ZP_05789856.1| porphobilinogen deaminase [Synechococcus sp. WH 8109] gi|260413760|gb|EEX07056.1| porphobilinogen deaminase [Synechococcus sp. WH 8109] Length = 317 Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 106/292 (36%), Positives = 149/292 (51%), Gaps = 5/292 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLKITVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117 KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + +T A Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNTKNHAYK 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L SV+GTSSLRR A L + D RG + TRL KL+N ++LA AG+ Sbjct: 119 LDTLPEGSVVGTSSLRRLAQLRHHYPHLIFKDVRGNVITRLEKLDNGDYDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +++ + + GQGA+ IE P+ E +KV+ H T ERAFL Sbjct: 179 RLGFGDRIHQLIPGDISLHAVGQGALGIECVEGKPEVLEAIKVLEHTPTSQRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 EL+G C+ I +G L G+V + DGK +G DA IG Sbjct: 239 RELEGGCQVPIGVNTRFEGDQLILTGMVASLDGKRLIRDQASGAASDAEAIG 290 >gi|300690776|ref|YP_003751771.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Ralstonia solanacearum PSI07] gi|299077836|emb|CBJ50474.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Ralstonia solanacearum PSI07] Length = 334 Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 100/265 (37%), Positives = 150/265 (56%), Gaps = 3/265 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF +E Sbjct: 24 IASRESRLAMWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLFVKE 81 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P +L G + L RED RD F+S+ L L +V+ Sbjct: 82 LEVALAEGRADLAVHSLKDVPMELPAGFALPTILEREDPRDAFVSNHYADLAALPAGAVV 141 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A L + + RG ++TRL+KL+ AI+LA AG+KRL + I+ Sbjct: 142 GTSSLRREASLRARFPHLVIQPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLSERIRA 201 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 ++ E P+ GQGA+ IE + P Q + ++H T +V ERA L GSC+ Sbjct: 202 VIAPEASLPAAGQGALGIEIRADRPDVQAWLAPLHHAPTALAVTAERAVSRRLGGSCQVP 261 Query: 248 IAGFA-YCKGSTLYFYGIVLASDGK 271 +A FA + L V + DG+ Sbjct: 262 LAAFAQWTDDGALRLRAFVASQDGR 286 >gi|57238255|ref|YP_178664.1| porphobilinogen deaminase [Campylobacter jejuni RM1221] gi|121612975|ref|YP_001000245.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 81-176] gi|148925915|ref|ZP_01809602.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni CG8486] gi|167005201|ref|ZP_02270959.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 81-176] gi|205355401|ref|ZP_03222172.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni CG8421] gi|81557551|sp|Q5HVM1|HEM3_CAMJR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|158513884|sp|A1VYQ4|HEM3_CAMJJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|57167059|gb|AAW35838.1| porphobilinogen deaminase [Campylobacter jejuni RM1221] gi|87250005|gb|EAQ72963.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 81-176] gi|145844901|gb|EDK22005.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni CG8486] gi|205346635|gb|EDZ33267.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni CG8421] gi|284925807|gb|ADC28159.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni IA3902] gi|315057963|gb|ADT72292.1| Porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni S3] Length = 307 Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 97/265 (36%), Positives = 146/265 (55%), Gaps = 6/265 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL + L + H+I +++ TKGD + + L +IGGKGLFT+E Sbjct: 5 IATRKSQLALWQSEHVAQILKNTHQI---EVLLEGFKTKGDVLLDSPLAKIGGKGLFTKE 61 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L + I Sbjct: 62 LEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKGAKI 121 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+SLRRK LL R D+ +I RG + +R+ KL NN AI+LA AGIKRL +K + Sbjct: 122 GTTSLRRKMQLLLLRPDLDIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQVNF 181 Query: 188 ILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ P+ QGA+ IE+ +N+ K EL+K +N E+ + ER F+A L+G C+ Sbjct: 182 VYEFSKDELIPAASQGALGIES-INDEKILELLKCLNDENALIETSIEREFIATLEGGCQ 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270 I A G + ++ DG Sbjct: 241 VPIGINAELLGDEICVRAVLGLPDG 265 >gi|294496111|ref|YP_003542604.1| hydroxymethylbilane synthase [Methanohalophilus mahii DSM 5219] gi|292667110|gb|ADE36959.1| hydroxymethylbilane synthase [Methanohalophilus mahii DSM 5219] Length = 308 Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 96/266 (36%), Positives = 153/266 (57%), Gaps = 8/266 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LALA A +T L+D P +I T GD T+R L E+ G G F E Sbjct: 3 IGTRGSDLALAQA-KTVEGLLDSRGFPTTRKII---KTSGDTFTDRPLHEVEGVGAFVRE 58 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 ++ +++SGEID AVHS KD+PT+ L I+A + R+ D+ +++ +L +L +++ Sbjct: 59 LDDRMLSGEIDIAVHSMKDLPTERPAELSIAAVIERDSPHDLLLTNDGSTLDELPEGAIV 118 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+S+RR+A LR+R D+ V D RG I TRL KL + AI+LA AG++R+ + + Sbjct: 119 GTTSMRRRAQFLRYRPDLDVQDLRGNINTRLKKLESGMYDAIILAEAGLQRMGWD-IECH 177 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 L+ ++F PS QG I + T + +A+ L I+H ++ + ER + +++G C Sbjct: 178 RLDGDNFCPSANQGTIAVVT-LAGGEAELLCSQIDHTESRIATEVERLVIRDVEGGCIVP 236 Query: 248 IAGFA--YCKGSTLYFYGIVLASDGK 271 + FA G+ ++ +L+ DGK Sbjct: 237 VGSFAEFVDNGNKIHIRAEILSLDGK 262 >gi|120437548|ref|YP_863234.1| porphobilinogen deaminase [Gramella forsetii KT0803] gi|117579698|emb|CAL68167.1| porphobilinogen deaminase [Gramella forsetii KT0803] Length = 305 Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 95/293 (32%), Positives = 162/293 (55%), Gaps = 8/293 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LAL A + +L H ++P+ + GD ++ L E+G G+ Sbjct: 3 KVIRIGTRDSELALWQAKTVQKALEST----GHQTELVPVKSTGDLNLDQPLYEMGITGI 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ ++ +I+G++D AVHS KD+PT L KG+ +A + R + +D+ I + L++ Sbjct: 59 FTKTLDVAMINGDVDIAVHSMKDVPTALPKGIVEAAIMKRANSKDLLIHKGVEFLEN--E 116 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 I T SLRRKA L + V+D RG + TR+ KLN+N + + A AG++R++ + Sbjct: 117 EGTIATGSLRRKAQWLHKYPNHKVVDLRGNVNTRMQKLNDNNWNGAIFAAAGLERIEIKP 176 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + +++ P+P QGA+ I + + + V+NH+++ V+ ER FL L+G Sbjct: 177 --ENFIDLNWMIPAPAQGAMLIVAMEEDEYCRRALSVLNHKESELCVHVEREFLKTLEGG 234 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C + I A + ++F+G + + DGK EV R+ + ++G++ AQ I Sbjct: 235 CTAPIGALAKILNNHVHFHGALFSLDGKKKMEVERSLPVAEIEDMGKECAQEI 287 >gi|284929513|ref|YP_003422035.1| hydroxymethylbilane synthase [cyanobacterium UCYN-A] gi|284809957|gb|ADB95654.1| hydroxymethylbilane synthase [cyanobacterium UCYN-A] Length = 318 Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 105/295 (35%), Positives = 157/295 (53%), Gaps = 5/295 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LAL + + L + P + I +ST+GD I + L +IG KGLFT Sbjct: 8 IRIGSRKSQLALVQTYWIQEQLQKHY--PNYEFQIETMSTQGDNILDVALAKIGDKGLFT 65 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122 +E+E ++ ID AVHS KD+PT L +GL + RE+ D + + L L Sbjct: 66 KELEVAMLQNRIDFAVHSLKDLPTNLPEGLMLGCITERENPADALVVNEKYKNNKLDTLP 125 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S+IGTSSLRR A L + D RG + TRL KL+ + AI+LA AG+KRL + Sbjct: 126 EGSIIGTSSLRRLAQLRHHYPYLIFKDVRGNVNTRLAKLDAGEYDAIILAAAGLKRLNMD 185 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I +I+ + + GQGA+ IE + + EL++V+ H +T ER+FL L+G Sbjct: 186 NRIHQIIPEDISLHAVGQGALGIECRAADSRILELLEVLKHSETHYRCMGERSFLRALEG 245 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C+ I + + L GIV + DGK + + +G+ A N+G + + +R Sbjct: 246 GCQVPIGVTTKIECNILTLTGIVASLDGKTMLKNTVSGHMEQAENLGYELSVCLR 300 >gi|297543913|ref|YP_003676215.1| porphobilinogen deaminase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841688|gb|ADH60204.1| porphobilinogen deaminase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 299 Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 92/252 (36%), Positives = 138/252 (54%), Gaps = 5/252 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK ++GTR S LAL T+ + ++ K I+ ++T+GD + ++ ++EIGGK Sbjct: 2 KKVIKVGTRSSELALVQ---TQMVINEIKKFRQDFEFEIVKITTQGDALIDKPVSEIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F +EIE L+ GEID AVHS KDMP ++ KGL++ A L RED +DVF+S DL Sbjct: 59 GVFVKEIESALLKGEIDMAVHSMKDMPYEIPKGLKLMAVLKREDPKDVFVSRDGTQFMDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSSLRR+ L + DI ++ RG + TRL K+ I+L+ AG+ RL Sbjct: 119 KEGAKIGTSSLRRQVQLKALKPDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E +I E + P+P QG + +E + + QE I T+ + ER L Sbjct: 179 ESIITEYFPPDVVVPAPCQGILAVEIAESFDNIFQEFYPYIVDRRTFFEASVERELLKVF 238 Query: 241 DGSCKSAIAGFA 252 +C+ +A Sbjct: 239 GVNCRQPFGAYA 250 >gi|302543510|ref|ZP_07295852.1| hydroxymethylbilane synthase [Streptomyces hygroscopicus ATCC 53653] gi|302461128|gb|EFL24221.1| hydroxymethylbilane synthase [Streptomyces himastatinicus ATCC 53653] Length = 322 Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 97/305 (31%), Positives = 162/305 (53%), Gaps = 17/305 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + ++ ++ P + ++ ++T GD ++ L +IGG G+F Sbjct: 8 PLRLGTRRSALAMAQSGLIADAVRELTGRP---VELVEITTYGD-VSREQLAQIGGTGVF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L+SGEID AVHS KD+PT +GL ++A RED RD I+ + + L Sbjct: 64 VSALREALLSGEIDFAVHSLKDLPTAEPEGLTLAAIPRREDPRDALIARDGLTFEQLPPG 123 Query: 125 SVIGTSSLRRKALLLRW-RS---DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + IGT S RR A L W RS D+ + RG + TR+ + + + A++LA AG+ RL Sbjct: 124 ARIGTGSPRRAAQLNAWARSVGLDVETVPIRGNVGTRIGYVRSGELDAVVLAAAGLSRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + EIL+ + P+PGQGA+ +E ++ + L+ ++ T +V ER+ LA L Sbjct: 184 RIGEATEILDADHVLPAPGQGALAVECAADDAELTALLAGLDDPHTRAAVTAERSLLAAL 243 Query: 241 DGSCKSAIAGFAYCKG-----STLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRD 291 + C + + A G + + G+V +DG ++S G + A ++GR+ Sbjct: 244 EAGCSAPVGALADLLGDGQVVTEMRLRGVVGTTDGTTLVQLSTTGPVPASPDQAADLGRE 303 Query: 292 AAQYI 296 A + Sbjct: 304 LAAEM 308 >gi|296282337|ref|ZP_06860335.1| porphobilinogen deaminase [Citromicrobium bathyomarinum JL354] Length = 292 Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 91/254 (35%), Positives = 136/254 (53%), Gaps = 3/254 (1%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 +A A ETR+ L H + ++P+ GD++ +R L ++GGK L+T E++ L G Sbjct: 1 MAQAHETRARLCAAHGWDESAVELVPVVAGGDKVQDRPLADVGGKALWTRELDAWLDEGR 60 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 ID AVHS KD+ T + + ++A LPR D RDV + A SL+ + + +GTS+ RR A Sbjct: 61 IDAAVHSLKDVETIRPEWITLAAILPRADRRDVLLG--ASSLRSIPQGATLGTSAPRRAA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 + R DI + FRG + TR+ KL +A LLA AG++RL +E V L +E + P Sbjct: 119 QMKNLRPDIETVLFRGNVATRMAKLQAGEADVTLLAAAGLERLGQESV-GTPLPLETWLP 177 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 +P QGAI IE + + + +N T V ERA L L GSC S + Sbjct: 178 APSQGAIGIECRTEDSVTRGHLDALNDAPTRREVEAERALLEALGGSCHSPVGVLVENAD 237 Query: 257 STLYFYGIVLASDG 270 L+ + ++DG Sbjct: 238 EGLHMRAALFSADG 251 >gi|269796870|ref|YP_003316325.1| hydroxymethylbilane synthase [Sanguibacter keddieii DSM 10542] gi|269099055|gb|ACZ23491.1| hydroxymethylbilane synthase [Sanguibacter keddieii DSM 10542] Length = 312 Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 96/278 (34%), Positives = 146/278 (52%), Gaps = 12/278 (4%) Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M P RIGTR S LAL +T + D+ ++ + I+P++T GD +T +L+++G Sbjct: 1 MTGHPALRIGTRSSLLALT---QTGTVADDLRRLTGRPVEIVPVTTDGDVLTG-SLSQMG 56 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G G+F + L+ D AVHS KD+PT + GLQ + R+D RD S L Sbjct: 57 GTGVFVTALRAALLDDRCDVAVHSLKDLPTAGVLGLQHVTPV-RQDPRDALCSRAGHRLA 115 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177 DL + +GT S RR A L R D+ V+D RG I+TRL +++ A++LA AG+ Sbjct: 116 DLPHGARVGTGSPRRAAQLRLVRPDLDVVDIRGNIDTRLGRVHPETGDLDAVVLAAAGLN 175 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVN----NPKAQELVKVINHEDTWDSVNCE 233 R+ +E I E++++ D P+PGQGA+ +ET + +P ++ T SV E Sbjct: 176 RIGREHAITELISVTDMAPAPGQGALAVETRSSLLEEDPVVARAFDQLDDPATSLSVLAE 235 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 RA LA L+ C + + A L + +V DG Sbjct: 236 RALLARLEAGCAAPVGTHATVSDGLLTLHAVVARPDGS 273 >gi|258651772|ref|YP_003200928.1| porphobilinogen deaminase [Nakamurella multipartita DSM 44233] gi|258554997|gb|ACV77939.1| porphobilinogen deaminase [Nakamurella multipartita DSM 44233] Length = 305 Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 90/283 (31%), Positives = 145/283 (51%), Gaps = 7/283 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMD-VHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + R+GTR S LALA + + D V ++ + ++ + T+GD + L IG Sbjct: 1 MSSRVLRVGTRGSALALAQS----GMIADRVARLAGATVELVRIRTEGD-VNTGPLATIG 55 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G G+F + + L+ G D VHS KD+PT +G+ ++A RE D + L Sbjct: 56 GTGVFVTGVREALLDGRADIVVHSYKDLPTAPTEGITVAAVPERESPFDALCARDGLRLD 115 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL S +GT S RR A LL R D++V+ RG ++TRL +++ A++LA AG+ RL Sbjct: 116 DLPRGSTVGTGSPRRAAQLLARRPDLAVVPIRGNVDTRLRQVSEGHLDAVVLAAAGLNRL 175 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLA 238 + I ++L+ + P+P QGA+ +E + E + ++ T +V ER L Sbjct: 176 GRADAITDVLDADRMLPAPAQGALAVECRSGADTWFTEATRTLDDAPTRAAVVAERVLLR 235 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281 +L+ C + + FA +G L +V+A DG V R G+ Sbjct: 236 DLEAGCSAPVGAFAQVQGDALTLRAVVVAVDGSSEFRVHRAGS 278 >gi|61653263|gb|AAX48216.1| porphobilinogen deaminase [uncultured proteobacterium DelRiverFos06H03] Length = 314 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 96/257 (37%), Positives = 138/257 (53%), Gaps = 4/257 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A + L + H + ++ ++T GD+I ++ L++IGGKGLF +E Sbjct: 7 IATRESRLALWQANHVKELL----ECQGHQVELLGMTTLGDQILDQPLSQIGGKGLFIKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G AVHS KD+P L +G +++ L RED RD ++S +SL L +V+ Sbjct: 63 LEVALADGSAHLAVHSLKDVPMDLPEGFELACILEREDPRDAWVSPRFESLDSLPPGAVV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR LL R D+ + RG ++TRL KL+ + I+LA AG+KRL + I+ Sbjct: 123 GTSSLRRTVLLKALRPDLKIEPLRGNLDTRLRKLDEGQYAGIVLASAGLKRLGLKDRIRY 182 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + P+ GQGAI IE P L+ +NH T V ER + GSC Sbjct: 183 SFPLNTMTPAAGQGAIGIEICDKRPDLAHLLSNLNHLPTAVQVYAERGVSRTMGGSCSMP 242 Query: 248 IAGFAYCKGSTLYFYGI 264 +A A + L + I Sbjct: 243 LAAHATLETGLLSIHAI 259 >gi|33866317|ref|NP_897876.1| porphobilinogen deaminase [Synechococcus sp. WH 8102] gi|39931373|sp|Q7U5C2|HEM3_SYNPX RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|33639292|emb|CAE08300.1| Porphobilinogen deaminase [Synechococcus sp. WH 8102] Length = 317 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 103/300 (34%), Positives = 157/300 (52%), Gaps = 5/300 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLTITVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS--- 117 KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + + + Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNAKNANHK 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L +V+GTSSLRR A L +S D RG + TRL KL++ ++LA AG++ Sbjct: 119 LDTLPEGAVVGTSSLRRLAQLRHHYPHLSFKDVRGNVITRLEKLDSGDYDCLILAAAGLE 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +I+ + + GQGA+ IE + P+ E++KV+ H T ERAFL Sbjct: 179 RLGFGNRIHQIIPGDISLHAVGQGALGIECVEDKPEVLEIIKVLEHTTTSRRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + L G+V + DGK +G+ D +IG + A ++ Sbjct: 239 RELEGGCQVPIGVNSQINNEELTLTGMVASLDGKRLIRDEASGSAADPESIGIELAGKLK 298 >gi|322379565|ref|ZP_08053902.1| porphobilinogen deaminase [Helicobacter suis HS1] gi|322380567|ref|ZP_08054732.1| porphobilinogen deaminase [Helicobacter suis HS5] gi|321147006|gb|EFX41741.1| porphobilinogen deaminase [Helicobacter suis HS5] gi|321147959|gb|EFX42522.1| porphobilinogen deaminase [Helicobacter suis HS1] Length = 302 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 98/267 (36%), Positives = 148/267 (55%), Gaps = 5/267 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 KP IG+R S LAL A ++ L + + VI + TKGD+I + L +IGGKGL Sbjct: 2 KPLIIGSRGSALALWQARYIQTQLESLGLLS----VIEVVKTKGDKILDVPLAKIGGKGL 57 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E+ L+S +ID AVHS KD+P + ++ L ++ R D RD F+S + + KDL Sbjct: 58 FTKELEELLLSKDIDLAVHSLKDVPVEFVEPLDLACVSVRADARDCFLSFKSPNFKDLPK 117 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GT+SLRR L R R D+ + RG ++TRL +L + AI+LA AG++RL+ + Sbjct: 118 GAKVGTTSLRRSMQLKRKRPDLDTLSLRGNVQTRLKRLEAGEFDAIVLACAGVERLQIKV 177 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + IE+ P GQGA+ +E ++P + +N + ER F+ +L G Sbjct: 178 PYQIPFEIEEMIPCMGQGALGVEMCTSHPLFNTIAG-LNDSTSAFLCGVERLFVKKLGGG 236 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG 270 C+ I A KG L +V DG Sbjct: 237 CQVPIGVHASLKGDHLEICAVVGLVDG 263 >gi|283798144|ref|ZP_06347297.1| hydroxymethylbilane synthase [Clostridium sp. M62/1] gi|291074124|gb|EFE11488.1| hydroxymethylbilane synthase [Clostridium sp. M62/1] gi|295091711|emb|CBK77818.1| hydroxymethylbilane synthase [Clostridium cf. saccharolyticum K10] Length = 298 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 94/261 (36%), Positives = 140/261 (53%), Gaps = 6/261 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K R+G+R S LA+ A ++ P + ++ + T GDRI N++L +IGGKGL Sbjct: 3 KKVRVGSRDSLLAVRQAELVMEAVRKAS--PETELTLVTMKTTGDRILNQSLDKIGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E++ L+ G D +VHS KDMP ++ + L I AY PRED RDV + + L +L Sbjct: 61 FVKELDLALMEGRSDLSVHSLKDMPMEIPEELPILAYSPREDNRDVLVLR--EGLSELPA 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 H VIGT S RRK R D RG I TRL KL++ + A++LA AG+ R+ + Sbjct: 119 HPVIGTGSARRKIQAARIYPDAEFKGIRGNIHTRLRKLDSGEYDALILAAAGMIRMGLQD 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I ++E+ P GQG + ++ ++ + + IN + ER+F+ LDG Sbjct: 179 RISRYFSVEEIIPPAGQGIMAVQGRKDD--SYPFLIKINSPKSQAMAEAERSFVKTLDGG 236 Query: 244 CKSAIAGFAYCKGSTLYFYGI 264 C S IA A +G L G+ Sbjct: 237 CSSPIAACALIEGDRLKLRGL 257 >gi|327403451|ref|YP_004344289.1| Porphobilinogen deaminase [Fluviicola taffensis DSM 16823] gi|327318959|gb|AEA43451.1| Porphobilinogen deaminase [Fluviicola taffensis DSM 16823] Length = 304 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 98/255 (38%), Positives = 145/255 (56%), Gaps = 12/255 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LAL A + L + + I ++TKGD+I + + ++ GKG FT Sbjct: 4 IRIGSRGSDLALWQANHVKKQLEALGA----EVGITIITTKGDQIQDLSFDKLEGKGFFT 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD----L 121 +EIE+ L+ ID AVHS KD+ T +GL I+A RE+ DV + H KD L Sbjct: 60 KEIEQALLDNSIDLAVHSHKDLETNTPEGLIIAAVSERENPADVLLIHPNAFDKDEFWSL 119 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSS RRK+ ++ +RSDI + D RG + TRL KL + AILLA AG+ RL+ Sbjct: 120 KKGAVVGTSSARRKSQVIAFRSDIEIKDLRGNVPTRLQKLIDGGYDAILLAKAGLDRLQL 179 Query: 182 E-KVIKE-ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + K + E +L+ E+F P+P QG + ++ N+ + ++ +NHED + ER L Sbjct: 180 DLKGMHEVVLDPEEFIPAPAQGVLALQIRENDNELYNFMQAMNHEDIQSQIALERNLLNR 239 Query: 240 LDGSCKSAIAGFAYC 254 L G C+ + AYC Sbjct: 240 LQGGCQLPLG--AYC 252 >gi|315023924|gb|EFT36926.1| Porphobilinogen deaminase [Riemerella anatipestifer RA-YM] gi|325335710|gb|ADZ11984.1| Porphobilinogen deaminase [Riemerella anatipestifer RA-GD] Length = 306 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 100/297 (33%), Positives = 158/297 (53%), Gaps = 16/297 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 + K +IGTR SPLAL A E ++L + + I+P+ + GD+ + L +G Sbjct: 3 LMKNTIKIGTRNSPLALWQAKEVAAALEQKN----YATEIVPIVSSGDKNLTQPLYSLGI 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT++++ L++ +ID AVHS KD+PT+L + + + AYL R+ +DV + + + KD Sbjct: 59 TGVFTKDLDIALLNKQIDIAVHSLKDVPTQLPQNIALIAYLERDYPQDVLVRSS--NAKD 116 Query: 121 LALHSV-IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L + I TSSLRR+A L+ + D RG ++TRL KL + A A L + AG+KR+ Sbjct: 117 KSLEELTIATSSLRRRAFWLKQFPNTKFSDIRGNVQTRLQKLEDGIADATLFSLAGLKRM 176 Query: 180 KKEKVIKEILNIEDFP---PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 + + E P +P QG + + H +N + E+VK INH T V ER F Sbjct: 177 ALD------IPYEHLPFMISAPSQGVVTVAGHTDNTEINEIVKTINHHQTQVCVEIERQF 230 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 L L+G C + I FA + F G + + +GK E++ N G + A Sbjct: 231 LNRLEGGCTAPIGAFAEFNEEEIKFQGRLCSLNGKECLELNETFAWKQGRNFGNELA 287 >gi|54310580|ref|YP_131600.1| putative porphobilinogen deaminase [Photobacterium profundum SS9] gi|46915023|emb|CAG21798.1| putative porphobilinogen deaminase [Photobacterium profundum SS9] Length = 234 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 85/202 (42%), Positives = 122/202 (60%), Gaps = 2/202 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M KP RI TR SPLA+ A ++ L H P + ++P+ TKGD I + L ++GG Sbjct: 32 MTDKPIRIATRKSPLAMWQAEFVQAELEKAH--PSLVVELVPMVTKGDIILDTPLAKVGG 89 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+T S+ + Sbjct: 90 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNTYNSIAE 149 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+ RL+ Sbjct: 150 LPAGSIVGTSSLRRQCQLRAQRPDLIINDLRGNVNTRLRKLDEGQYDAIILACAGLMRLE 209 Query: 181 KEKVIKEILNIEDFPPSPGQGA 202 I+ + E+ P+ GQGA Sbjct: 210 MHDRIRSAIEPEESLPAVGQGA 231 >gi|327290907|ref|XP_003230163.1| PREDICTED: porphobilinogen deaminase-like, partial [Anolis carolinensis] Length = 351 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 102/274 (37%), Positives = 144/274 (52%), Gaps = 6/274 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 ++ + R+GTR S LA L H P + II ++T GD+I + L++IG Sbjct: 7 LKNQTIRVGTRKSQLARIQTDSVVEMLQKHH--PQLHFEIIGMTTTGDKILDTALSKIGE 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117 K LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++ Sbjct: 65 KSLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPHDAVVFHPKHVGKT 124 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGI 176 L L SVIGTSSLRR A L R + D RG + TRL KL+ + AI+LA AG+ Sbjct: 125 LSSLPDKSVIGTSSLRRAAQLKRAFPQLQFKDIRGNLNTRLKKLDEKDDFSAIVLATAGL 184 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 +R+ E I +IL + + GQGA+ +E + + E+V V++ +T ERAF Sbjct: 185 RRMGWEDRIGQILTPMECLYAVGQGALAVEVRARDQEILEMVSVLHDGETVLRCIAERAF 244 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 + L+G C +A K S LY G V + DG Sbjct: 245 MKHLEGGCSVPVAVSTTLKDSQLYLTGAVYSLDG 278 >gi|326804046|ref|YP_004321864.1| hydroxymethylbilane synthase [Aerococcus urinae ACS-120-V-Col10a] gi|326650262|gb|AEA00445.1| hydroxymethylbilane synthase [Aerococcus urinae ACS-120-V-Col10a] Length = 332 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 93/289 (32%), Positives = 155/289 (53%), Gaps = 26/289 (8%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +RIGTR S LA+ + E +L V+ P ++ LSTKGD+ + L++IGGKG+F Sbjct: 4 YRIGTRSSRLAMQQSLEVVRALEAVY--PQDEFQLVKLSTKGDKDKSSPLSKIGGKGVFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 IE+ L G++D VHS KD+P++L +G ++A R+D DV ++ DL + Sbjct: 62 RWIEQALAQGKVDFIVHSLKDVPSELAQGTVLAAIPKRQDPGDVILTAKGMDWHDLPNGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK----- 180 +GT SLRR A L R D+ ++ RG I++RL+KL A++LA AG+KRL+ Sbjct: 122 RVGTGSLRRLAQLHALRPDLEIVHVRGNIDSRLDKLARGDFQALVLATAGLKRLQLLDYP 181 Query: 181 -------KEKVIKE--ILN----------IEDFPPSPGQGAICIETHVNNPKAQELVKVI 221 +++V E ILN +++ P+ GQGA+ ++ ++ + +E+++ + Sbjct: 182 FDSQRFNQKEVNSEAHILNNYELQAHAFSLDEMIPAVGQGALAVQCLNDDQQTREVLQAV 241 Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 + +T +V CER L L C + + KG + ++ DG Sbjct: 242 DDPETHQAVACERVVLKALGADCNYPVGAYGQIKGQEINLTAMIGRQDG 290 >gi|148544908|ref|YP_001272278.1| porphobilinogen deaminase [Lactobacillus reuteri DSM 20016] gi|184154245|ref|YP_001842586.1| porphobilinogen deaminase [Lactobacillus reuteri JCM 1112] gi|227364048|ref|ZP_03848148.1| hydroxymethylbilane synthase [Lactobacillus reuteri MM2-3] gi|325683253|ref|ZP_08162769.1| hydroxymethylbilane synthase [Lactobacillus reuteri MM4-1A] gi|167008814|sp|A5VM67|HEM3_LACRD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|229836109|sp|B2G9H4|HEM3_LACRJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|60172703|gb|AAX14537.1| HemC [Lactobacillus reuteri] gi|148531942|gb|ABQ83941.1| hydroxymethylbilane synthase [Lactobacillus reuteri DSM 20016] gi|183225589|dbj|BAG26106.1| porphobilinogen deaminase HemC [Lactobacillus reuteri JCM 1112] gi|227070970|gb|EEI09293.1| hydroxymethylbilane synthase [Lactobacillus reuteri MM2-3] gi|324977603|gb|EGC14554.1| hydroxymethylbilane synthase [Lactobacillus reuteri MM4-1A] Length = 305 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 98/266 (36%), Positives = 150/266 (56%), Gaps = 4/266 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LA+A +SL + P I + T+GDR + +L +IGGKG+F +E Sbjct: 7 VGSRKSKLAMAQTELVIASLEKI--FPDIKFEIKNVITEGDRNRHVSLAKIGGKGVFVKE 64 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH-TAQSLKDLALHSV 126 IE +L G ID AVHS KD+ L + L + A+ R D +S SL DL + Sbjct: 65 IEDELKDGTIDFAVHSLKDVMPILPEELVLGAFPKRVSPYDCLVSRKNLSSLNDLPKGAR 124 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGT+SLRR+ LL R D+ +I RG I+TRL K++ I+LA AG+ RL + Sbjct: 125 IGTNSLRRQGQLLSIRPDLKIIPIRGNIDTRLRKIDTEALDGIILAEAGLTRLNIDLSSY 184 Query: 187 EILNIEDF-PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +L+++++ P+ GQG + IE N+ + ++++ IN E++ V ER F+ EL GSC Sbjct: 185 HVLDLQNYIMPAVGQGCLAIECRKNDTRIRKMLDQINDEESAYCVQVEREFMRELGGSCN 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK 271 I G AY K + F G++ + +G+ Sbjct: 245 FPIGGHAYAKNGQILFDGLIASPNGE 270 >gi|313206850|ref|YP_004046027.1| porphobilinogen deaminase [Riemerella anatipestifer DSM 15868] gi|312446166|gb|ADQ82521.1| porphobilinogen deaminase [Riemerella anatipestifer DSM 15868] Length = 303 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 100/295 (33%), Positives = 157/295 (53%), Gaps = 16/295 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +IGTR SPLAL A E ++L + + I+P+ + GD+ + L +G G Sbjct: 2 KNTIKIGTRNSPLALWQAKEVAAALEQKN----YATEIVPIVSSGDKNLTQPLYSLGITG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT++++ L++ +ID AVHS KD+PT+L + + + AYL R+ +DV + + + KD + Sbjct: 58 VFTKDLDIALLNKQIDIAVHSLKDVPTQLPQNIALIAYLERDYPQDVLVRSS--NAKDKS 115 Query: 123 LHSV-IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 L + I TSSLRR+A L+ + D RG ++TRL KL + A A L + AG+KR+ Sbjct: 116 LEELTIATSSLRRRAFWLKQFPNTKFSDIRGNVQTRLQKLEDGIADATLFSLAGLKRMAL 175 Query: 182 EKVIKEILNIEDFP---PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + E P +P QG + + H +N + E+VK INH T V ER FL Sbjct: 176 D------IPYEHLPFMISAPSQGVVTVAGHTDNTEINEIVKTINHHQTQVCVEIERQFLN 229 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 L+G C + I FA + F G + + +GK E++ N G + A Sbjct: 230 RLEGGCTAPIGAFAEFNEEEIKFQGRLCSLNGKECLELNETFAWKQGRNFGNELA 284 >gi|257463595|ref|ZP_05627986.1| porphobilinogen deaminase [Fusobacterium sp. D12] gi|317061149|ref|ZP_07925634.1| porphobilinogen deaminase [Fusobacterium sp. D12] gi|313686825|gb|EFS23660.1| porphobilinogen deaminase [Fusobacterium sp. D12] Length = 301 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 96/266 (36%), Positives = 144/266 (54%), Gaps = 4/266 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL--TEI 58 M K +G+R S LALA + L P I + T+GD+ +E+ Sbjct: 1 MLKHHIILGSRGSILALAQTNWVKKQLQ--RHYPQLTFSIQVIETQGDKDLTSHFGNSEL 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 K FT+EIEK L+ GEID AVHS KD+P+ GL A RED+RDV +S + ++L Sbjct: 59 SLKSFFTKEIEKSLLDGEIDIAVHSMKDVPSSSPVGLICGAIPVREDVRDVLVSTSGKTL 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 DL S++GTSSLRR + + R D+ + RG I TRL KL AI+LA AG+KR Sbjct: 119 ADLPKGSILGTSSLRRIQNIKQLRPDLEIKALRGNIHTRLKKLEEGHYDAIVLAAAGLKR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E+ I E LN F P+P QGA+ I+ + + + +++ I+ E+ + ER F Sbjct: 179 VGLEEKITEYLNPTVFSPAPAQGALYIQCREKDEETRNILQSIHDENLAKILEIEREFSR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGI 264 DG C + + ++ +G ++F+ + Sbjct: 239 IFDGGCHTPMGCYSKVEGKKIFFHAM 264 >gi|84494981|ref|ZP_00994100.1| porphobilinogen deaminase [Janibacter sp. HTCC2649] gi|84384474|gb|EAQ00354.1| porphobilinogen deaminase [Janibacter sp. HTCC2649] Length = 329 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 93/295 (31%), Positives = 151/295 (51%), Gaps = 8/295 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L + H++ ++ ++T GDR L +GG G+F Sbjct: 3 LRLGTRRSALATTQSGWVADQLRALG----HDVELVEITTDGDRDRTTPLATMGGTGVFV 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + L +G +D AVHS KD+PT L ++A PRED RD ++ +L +L S Sbjct: 59 SALRDALRAGTVDLAVHSLKDLPTTPEDDLAVAAIPPREDPRDALVARDGLTLGELPSGS 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT S RR+A L + + + RG ++TRL ++ + A++LA AG+ RL + V+ Sbjct: 119 TVGTGSPRRRAQLEALGLGLDIRELRGNVDTRLGRVTSGDLDAVVLAQAGLARLGRTSVV 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+++ P+PGQGA+ +E ++ ++ V ++ DT V+ ERA L+EL+ C Sbjct: 179 TEVIDPIQMLPAPGQGALAVEVRADDAATRDAVAALDDADTRACVDAERAVLSELEVGCS 238 Query: 246 SAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A G L +V + DG S G+ DA IGR A+ + Sbjct: 239 APVGALAEIVLGDDGDELSLRAVVASPDGTGDIRRSATGSPTDADGIGRRLARLL 293 >gi|290955334|ref|YP_003486516.1| porphobilinogen deaminase [Streptomyces scabiei 87.22] gi|260644860|emb|CBG67946.1| porphobilinogen deaminase [Streptomyces scabiei 87.22] Length = 296 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 96/282 (34%), Positives = 140/282 (49%), Gaps = 6/282 (2%) Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74 +ALA R+ L +H P ++P+ T GD+ L+++ GKG FT+E++ L++ Sbjct: 1 MALAQVERVRAELAVLH--PALRTEVVPVKTTGDKWMG-DLSQVEGKGAFTKEVDAALVA 57 Query: 75 GEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSL 132 GE D AVH KD+P L G +A+L R+DIRD + ++L +L + IGTSS+ Sbjct: 58 GEADLAVHCVKDIPADRPLPAGTMFAAFLKRDDIRDALVDPAGRTLDELPAGTRIGTSSV 117 Query: 133 RRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192 RR A L + + FRG RL KL +A A+LLA +G++R+ + VI E L++E Sbjct: 118 RRTAQLAASHPHLECVPFRGNANRRLEKLAAGEADALLLAVSGLERIGRADVISEFLSVE 177 Query: 193 DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252 P G G + ++ + + V + DT ER FL L G C S IAGFA Sbjct: 178 TMMPPIGAGVLALQCREGDALTIDTVSGLGDPDTHRETLAERMFLHVLQGHCNSPIAGFA 237 Query: 253 YC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 +G L V DGK R D +G A Sbjct: 238 RTDRGGELSLRASVFTPDGKTVLNAHEWAGRLDPATLGTSVA 279 >gi|326391319|ref|ZP_08212859.1| porphobilinogen deaminase [Thermoanaerobacter ethanolicus JW 200] gi|325992648|gb|EGD51100.1| porphobilinogen deaminase [Thermoanaerobacter ethanolicus JW 200] Length = 299 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 92/252 (36%), Positives = 137/252 (54%), Gaps = 5/252 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK ++GTR S LAL T + ++ K I+ ++T+GD + ++ ++EIGGK Sbjct: 2 KKVIKVGTRSSELALKQ---TAMVINEIKKFRQDFEFEIVKITTQGDALIDKPVSEIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F +EIE L+ GEID AVHS KDMP ++ KGL++ A L RED +DVF+S DL Sbjct: 59 GVFVKEIESALLKGEIDMAVHSMKDMPYEIPKGLKLMAVLKREDPKDVFVSRDGTQFMDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSSLRR+ L + DI ++ RG + TRL K+ I+L+ AG+ RL Sbjct: 119 KEGAKIGTSSLRRQVQLKALKPDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E +I E + P+P QG + +E + + QE I T+ + ER L Sbjct: 179 ENIITEYFPPDVVVPAPCQGILSVEIAESFDNIFQEFYPYIVDRKTFFEASVERELLKAF 238 Query: 241 DGSCKSAIAGFA 252 +C+ +A Sbjct: 239 GVNCRQPFGAYA 250 >gi|86151766|ref|ZP_01069980.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 260.94] gi|315124067|ref|YP_004066071.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841395|gb|EAQ58643.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 260.94] gi|315017789|gb|ADT65882.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 307 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 96/265 (36%), Positives = 146/265 (55%), Gaps = 6/265 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL + L + H+I +++ TKGD + + L +IGGKGLFT+E Sbjct: 5 IATRKSQLALWQSEHVAQILKNTHQI---EVLLEGFKTKGDVLLDSPLAKIGGKGLFTKE 61 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L + I Sbjct: 62 LEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKGAKI 121 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+SLRRK LL R D+ +I RG + +R+ KL NN AI+LA AGIKRL +K + Sbjct: 122 GTTSLRRKMQLLLLRPDLDIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQVNF 181 Query: 188 ILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ P+ QGA+ IE+ +N+ K EL++ +N E+ + ER F+A L+G C+ Sbjct: 182 VYEFSKDELIPAASQGALGIES-INDEKILELLECLNDENALIETSIEREFIATLEGGCQ 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270 I A G + ++ DG Sbjct: 241 VPIGINAELLGDEICVRAVLGLPDG 265 >gi|78212229|ref|YP_381008.1| porphobilinogen deaminase [Synechococcus sp. CC9605] gi|123729770|sp|Q3ALS9|HEM3_SYNSC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78196688|gb|ABB34453.1| porphobilinogen deaminase [Synechococcus sp. CC9605] Length = 317 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 105/293 (35%), Positives = 151/293 (51%), Gaps = 7/293 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLKITVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117 KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + + A Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNAKNQAYK 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L SV+GTSSLRR A L + D RG + TRL KL++ ++LA AG+ Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRHHYPHLIFKDVRGNVITRLEKLDSGDYDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +++ E + GQGA+ IE P+ E +KV+ H T ERAFL Sbjct: 179 RLGFSDRIHQLIPGEISLHAVGQGALGIECVEGKPEVLEAIKVLEHTPTSQRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCDAINI 288 EL+G C+ I +G L G+V + DGK I + S + +AI I Sbjct: 239 RELEGGCQVPIGVNTRFEGDQLILTGMVASLDGKRLIRDQTSGEASEAEAIGI 291 >gi|88807654|ref|ZP_01123166.1| porphobilinogen deaminase [Synechococcus sp. WH 7805] gi|88788868|gb|EAR20023.1| porphobilinogen deaminase [Synechococcus sp. WH 7805] Length = 317 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 103/300 (34%), Positives = 156/300 (52%), Gaps = 5/300 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALEHLRIASRRSQLAMVQTNWVKAELESAH--PGMAISVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117 KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + ++ + Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNSKNADHT 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L SV+GTSSLRR A L + D RG + TRL KL+ + ++LA AG+ Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRHHFPHLQFKDVRGNVITRLEKLDAGQYDCLILAAAGLS 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +I+ + GQGA+ IE + P+ ++++V+ H T ERAFL Sbjct: 179 RLGFGDRIHQIIPGHISLHAVGQGALGIECVCDRPEVLKIIQVLEHAPTAGRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + G L G+V + DG R G+ D IGR A ++ Sbjct: 239 RELEGGCQVPIGVNSRIDGQELILTGMVASLDGLRLIRDERRGSLTDPEAIGRALAADLK 298 >gi|167038985|ref|YP_001661970.1| porphobilinogen deaminase [Thermoanaerobacter sp. X514] gi|300913424|ref|ZP_07130741.1| porphobilinogen deaminase [Thermoanaerobacter sp. X561] gi|307723560|ref|YP_003903311.1| porphobilinogen deaminase [Thermoanaerobacter sp. X513] gi|166853225|gb|ABY91634.1| porphobilinogen deaminase [Thermoanaerobacter sp. X514] gi|300890109|gb|EFK85254.1| porphobilinogen deaminase [Thermoanaerobacter sp. X561] gi|307580621|gb|ADN54020.1| porphobilinogen deaminase [Thermoanaerobacter sp. X513] Length = 299 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 92/252 (36%), Positives = 137/252 (54%), Gaps = 5/252 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK ++GTR S LAL T + ++ K I+ ++T+GD + ++ ++EIGGK Sbjct: 2 KKVIKVGTRSSELALKQ---TAMVINEIKKFRQDFEFEIVKITTQGDALIDKPVSEIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F +EIE L+ GEID AVHS KDMP ++ KGL++ A L RED +DVF+S DL Sbjct: 59 GVFVKEIESALLKGEIDMAVHSMKDMPYEIPKGLKLMAVLKREDPKDVFVSGDGTQFMDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSSLRR+ L + DI ++ RG + TRL K+ I+L+ AG+ RL Sbjct: 119 KEGAKIGTSSLRRQVQLKALKPDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E +I E + P+P QG + +E + + QE I T+ + ER L Sbjct: 179 ENIITEYFPPDVVVPAPCQGILAVEIAESFDNIFQEFYPYIVDRKTFFEASVERELLKAF 238 Query: 241 DGSCKSAIAGFA 252 +C+ +A Sbjct: 239 GVNCRQPFGAYA 250 >gi|300703401|ref|YP_003745003.1| hydroxymethylbilane synthase [Ralstonia solanacearum CFBP2957] gi|299071064|emb|CBJ42373.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Ralstonia solanacearum CFBP2957] Length = 334 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 100/265 (37%), Positives = 150/265 (56%), Gaps = 3/265 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF +E Sbjct: 24 IASRESRLAMWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLFVKE 81 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P +L G + A L RED RD F+S+ L L +V+ Sbjct: 82 LEVALAEGRADLAVHSLKDVPMELPPGFALPAILEREDPRDAFVSNQYADLAALPAGAVV 141 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A L + + RG ++TRL KL+ AI+LA AG+KRL + I+ Sbjct: 142 GTSSLRREASLRARFPHLVIQPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLSERIRA 201 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 ++ + P+ GQGA+ IET + Q + ++H T +V ERA L GSC+ Sbjct: 202 VIASDVSLPAAGQGALGIETRADRTDVQAWLAPLHHLPTALAVTAERAVSRRLGGSCQVP 261 Query: 248 IAGFA-YCKGSTLYFYGIVLASDGK 271 +A FA + L V + DG+ Sbjct: 262 LAAFAHWTDAGALRLRAFVASQDGR 286 >gi|318041172|ref|ZP_07973128.1| porphobilinogen deaminase [Synechococcus sp. CB0101] Length = 317 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 106/300 (35%), Positives = 151/300 (50%), Gaps = 5/300 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ R L H+ I I ++T+GD+I + L +IG Sbjct: 1 MAASQLRIASRRSQLAMVQTHWVRDELAKAHE--GLEITIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + H K Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVHEKHKDKT 118 Query: 121 LAL---HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 LA SV+GTSSLRR A L ++ D RG + TRL KL++ + ++LA AG+ Sbjct: 119 LATLPEGSVVGTSSLRRLAQLRHHFPHLTFKDVRGNVITRLEKLDSGEFDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I E+++ + GQGA+ IE + E +KV+ H T ERAFL Sbjct: 179 RLGLGDRIHELIDPSISLHAVGQGALGIECREGDTAVLEQIKVLEHLPTARRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I +G L G+V + DG+ G++ D IG A +R Sbjct: 239 RELEGGCQVPIGVNTRFEGDELVLTGMVASLDGQRLIRDEARGDQKDPEAIGIALAHALR 298 >gi|295094641|emb|CBK83732.1| porphobilinogen deaminase [Coprococcus sp. ART55/1] Length = 350 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 93/274 (33%), Positives = 149/274 (54%), Gaps = 20/274 (7%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +KK ++GTR S LALA +L + + P + ++ +ST+GDR T+R L E GGK Sbjct: 38 QKKTVKVGTRSSKLALAQTELVIKALNE--RFPQVDFQMVTMSTRGDRDTSRALLEFGGK 95 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 +F EE E+ + G+ID AVHSAKDMP ++++GL IS LPR +D+ I + + + D Sbjct: 96 AVFVEEFEEAIFKGDIDIAVHSAKDMPMEIMEGLTISGTLPRACPQDILIYKSGR-IFDR 154 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL-- 179 V+GTSSLRR+ + + + RG + TR+ KL + + AI+LA AG++RL Sbjct: 155 NDSFVVGTSSLRRQYQIRDMYRNAECKNLRGNVGTRIQKLEDGEYDAIILAAAGLERLGV 214 Query: 180 --------------KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED 225 K+++ ++ E P+ QG I IET + + ++V+ IN + Sbjct: 215 IEDKGNDSTECFEVHKDELTFRYISTESMLPAACQGIIAIETRTSG-EVYDMVRAINDTE 273 Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTL 259 + + CERA L+ L+ C I ++ G + Sbjct: 274 AYTQLTCERAVLSRLNAGCHEPIGVYSELHGDHM 307 >gi|198415361|ref|XP_002126885.1| PREDICTED: similar to hydroxymethylbilane synthase, b [Ciona intestinalis] Length = 359 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 101/269 (37%), Positives = 149/269 (55%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA+ + L ++K + I+ ++T GD+I +++L++ G K LFT Sbjct: 7 LRVGTRKSELAMVQTNWVVNQLKSLNK--SLEVEIVQMATIGDKILDKSLSKTGEKSLFT 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E LI+ ++D V+S KDMP+ L L ISA RED RD I H + L+DL Sbjct: 65 KELEDALIANQVDLVVNSLKDMPSTLPPNLTISAVSRREDPRDAVIMHPDNVGKRLEDLP 124 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181 S++GTSSLRR A L + D+ RG + TRL KL++ + AI+LA AG+KR+ Sbjct: 125 PGSIVGTSSLRRVAQLKKLFPDLKFKSIRGNLNTRLRKLDDASNFSAIILAVAGVKRMGW 184 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I L ++ + GQGA+ IET ++ K+ +LV ++ +DT ERAFL L Sbjct: 185 NARISYTLTTDECLYAIGQGALGIETRADDMKSIKLVSQLHDKDTVIRTVAERAFLKTLG 244 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C A ++ LY G V DG Sbjct: 245 GGCSVPQAVHSWIIEDELYMRGAVFNLDG 273 >gi|86604967|ref|YP_473730.1| porphobilinogen deaminase [Synechococcus sp. JA-3-3Ab] gi|86553509|gb|ABC98467.1| porphobilinogen deaminase [Synechococcus sp. JA-3-3Ab] Length = 310 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 102/295 (34%), Positives = 155/295 (52%), Gaps = 5/295 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R S LALA + L H P + + LST+GD I + L +IG KGLFT Sbjct: 1 MRIASRKSELALAQTYWVMGQLQAHH--PGLPLELHTLSTQGDIILDVALAKIGDKGLFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDLA 122 +E+E L++G D AVHS KD+PT+L +GL + A RED D + L L Sbjct: 59 KELEVSLLNGSSDLAVHSLKDLPTRLPEGLVLGAITQREDPLDALVLREELRGYQLATLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR A L + + RG + TRL KL+ + ++LA AG+KRL +E Sbjct: 119 AGTVIGTSSLRRLAQLRHAFPHLQFKNVRGNLNTRLAKLDRGEYDGLILAVAGLKRLGQE 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I E+L+ + GQG++ IE + + EL++ + + ERAFL L+G Sbjct: 179 QRIHEVLDPSVSLYAVGQGSLGIECRQGDERILELIRPLADAEATARCLAERAFLRALEG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C+ I + +G L+ G+V +G+ ++ G+ D +G A+ ++ Sbjct: 239 GCQVPIGVHSQVQGEELHLTGMVADLEGRQLIRDTQTGSTADPEAVGMALAEKLK 293 >gi|327400408|ref|YP_004341247.1| Porphobilinogen deaminase [Archaeoglobus veneficus SNP6] gi|327315916|gb|AEA46532.1| Porphobilinogen deaminase [Archaeoglobus veneficus SNP6] Length = 296 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 104/264 (39%), Positives = 148/264 (56%), Gaps = 11/264 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LALA + + L K + + I + T GD + +R L E G G F Sbjct: 7 VGTRGSKLALAQTEKVIAHL----KAEGYEVEIRIIKTPGDIMKDRPLHEFKGMGAFVRV 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I++ L+ G+ID AVHS KD+P+K+ G+ I+A L RE D F++ ++ +L +SV+ Sbjct: 63 IDEALVDGDIDIAVHSYKDVPSKI-NGV-IAAVLERESPCDAFVTREGLTIDELESYSVV 120 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GTSSLRR+A + R+R D+ + + RG ++TRL KL + AILLA AG+ RL EKV Sbjct: 121 GTSSLRRRAQIKRYRPDLKIENLRGNVDTRLRKLREKQYDAILLAEAGLIRLGLNEKVRY 180 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + LN E F PS QG I +ET ++LV +NH+ T ERA L EL C Sbjct: 181 QSLNPEIFVPSANQGIIAVETRKGE---EDLVSFMNHKRTAVEAEVERAVLKELGVGCAV 237 Query: 247 AIAGFAYCKGSTLYFYGIVLASDG 270 + +A G + Y VL+ DG Sbjct: 238 PVGIYAKFDGK-IRLYCEVLSHDG 260 >gi|153952621|ref|YP_001398427.1| porphobilinogen deaminase [Campylobacter jejuni subsp. doylei 269.97] gi|166201501|sp|A7H4J7|HEM3_CAMJD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|152940067|gb|ABS44808.1| porphobilinogen deaminase [Campylobacter jejuni subsp. doylei 269.97] Length = 307 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/265 (36%), Positives = 146/265 (55%), Gaps = 6/265 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL + L + H+I +++ TKGD + + L +IGGKGLFT+E Sbjct: 5 IATRKSQLALWQSEHVAQILKNTHQI---EVLLEGFKTKGDVLLDSPLAKIGGKGLFTKE 61 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L + I Sbjct: 62 LEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSTDAMLSQNYKDFLSLPKGAKI 121 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+SLRRK LL R D+ +I RG + +R+ KL NN+ AI+LA AGIKRL +K + Sbjct: 122 GTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNNEFDAIILAMAGIKRLNLDKQVNF 181 Query: 188 ILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ P+ QGA+ IE+ + + K EL+K +N E+ + ER F+A L+G C+ Sbjct: 182 VYEFSKDELIPAASQGALGIES-IKDEKILELLKCLNDENALIETSIEREFIATLEGGCQ 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270 I A G + ++ DG Sbjct: 241 VPIGINAELLGDEICVRAVLGLPDG 265 >gi|56685543|dbj|BAD78765.1| hydroxymethylbilane synthase [Synechococcus elongatus PCC 6301] Length = 300 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 93/241 (38%), Positives = 133/241 (55%), Gaps = 3/241 (1%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + +ST+GD I + L +IG KGLFT+E+E +++GE+D AVHS KD+PT+L + Sbjct: 15 PDRQFDVQTMSTQGDIILDVALAKIGDKGLFTKELEVAMLAGEVDFAVHSLKDLPTRLPE 74 Query: 94 GLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDF 150 GL + RED D + H L+ L +VIGTSSLRR A L + D Sbjct: 75 GLILGCVTEREDPADALVVHDRFKDHQLETLPEGTVIGTSSLRRLAQLRHHYPHLQFKDV 134 Query: 151 RGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVN 210 RG + TRL KL+ + A++LA AG++RL I +++ + GQGA+ IE Sbjct: 135 RGNLNTRLAKLDAGEYDALILAAAGLQRLSMADRIHQLIPAAVSLHAVGQGALGIECRAE 194 Query: 211 NPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 +P+ EL+K + HE T ERAFL EL+G C+ I TL G+V + DG Sbjct: 195 DPEILELLKALEHEPTSQRCLAERAFLRELEGGCQVPIGVNTAIADGTLTLTGMVASLDG 254 Query: 271 K 271 + Sbjct: 255 Q 255 >gi|332527780|ref|ZP_08403819.1| porphobilinogen deaminase [Rubrivivax benzoatilyticus JA2] gi|332112176|gb|EGJ12152.1| porphobilinogen deaminase [Rubrivivax benzoatilyticus JA2] Length = 309 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 94/252 (37%), Positives = 138/252 (54%), Gaps = 3/252 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A R L + + ++ ++TKGD+I +R L+++GGKGLF +E Sbjct: 7 IATRESRLALWQAEHVRDVLTARFGL---AVELLGMTTKGDQILDRALSKVGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G AVHS KD+P L G ++A RED RD ++S+ ++L L + + Sbjct: 64 LETALEEGRAHLAVHSLKDVPMDLPPGFALAAIWEREDPRDAWVSNQYENLDALPQGACV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR LL R D+ + RG ++TRL KL+ AI+LA AG+KRL I+ Sbjct: 124 GTSSLRRVVQLLARRPDLKIEPLRGNLDTRLRKLDEGGYDAIVLAAAGLKRLGLGARIRS 183 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + + P+ GQGA+ IE ++ + +EL+ H T+ + + ERA L GSC Sbjct: 184 LFDTSVMIPAAGQGALGIEIREDDTRLKELLAQTLHLPTFLACHAERAVSRSLGGSCSMP 243 Query: 248 IAGFAYCKGSTL 259 +A F L Sbjct: 244 LAAFGQWNDGVL 255 >gi|307332259|ref|ZP_07611338.1| porphobilinogen deaminase [Streptomyces violaceusniger Tu 4113] gi|306882087|gb|EFN13194.1| porphobilinogen deaminase [Streptomyces violaceusniger Tu 4113] Length = 319 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 97/304 (31%), Positives = 150/304 (49%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L + P ++P++T GDR L+++GGKG FT Sbjct: 15 IRIVSRSSPMALAQVERVRAELAALR--PGIRTEVVPVTTSGDRWMG-DLSKLGGKGAFT 71 Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +AYL R+DIRD I +L ++ Sbjct: 72 KEVDAALLAGEADLAVHCIKDVPADRPLPAGTVFAAYLKRDDIRDAVIHPEGLTLDEMPA 131 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSS+RR A L ++ + RG RL KL + A++LA +G++R+ + Sbjct: 132 GTRIGTSSVRRVAQLAITHPELECVPMRGNANRRLEKLEAGECDALMLAVSGLERIGRTD 191 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I EIL ++ P G G + ++ ++ + E V + D W + ER L L G Sbjct: 192 RISEILPVDTMCPPIGAGVLGLQCREDDTETIEAVAGLGDADVWKEITAERMLLHVLQGH 251 Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG+A + L V + DGK + D +G A + + Sbjct: 252 CNSPIAGYAKAERDGRLSLRARVFSPDGKRVLDAHEWAGPLDPATLGTSVAVALLRQGAR 311 Query: 303 NVFN 306 V + Sbjct: 312 EVID 315 >gi|297156263|gb|ADI05975.1| porphobilinogen deaminase [Streptomyces bingchenggensis BCW-1] Length = 315 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 98/304 (32%), Positives = 147/304 (48%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L + P ++P++T GDR L+ +GGKG FT Sbjct: 11 IRIVSRSSPMALAQVERVRAELAALR--PGIRTEVVPVTTSGDRWMG-DLSALGGKGAFT 67 Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +AYL R+DIRD + +L L Sbjct: 68 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTVFAAYLKRDDIRDAVVHPGGLTLDQLPE 127 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSS+RR A L + + RG RL KL+ + A+LLA +G++R+ + Sbjct: 128 GARIGTSSVRRIAQLAVSHPHLECVPMRGNANRRLEKLDAGECDALLLAVSGLERIGRTD 187 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I EIL +E P G G + ++ ++ + V + D W + ER L L G Sbjct: 188 RISEILPVETMCPPIGAGVLALQCREDDTATIDAVSGLGDADAWKEITAERMLLHVLQGH 247 Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG+A + L V + DGK + D +G A + + Sbjct: 248 CNSPIAGYARAERDGRLSLRARVFSPDGKTVLDAHEWAGPLDPATLGTSVAVALLRQGAR 307 Query: 303 NVFN 306 V + Sbjct: 308 EVID 311 >gi|332186913|ref|ZP_08388654.1| porphobilinogen deaminase [Sphingomonas sp. S17] gi|332012923|gb|EGI54987.1| porphobilinogen deaminase [Sphingomonas sp. S17] Length = 210 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 84/193 (43%), Positives = 121/193 (62%), Gaps = 4/193 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 FR+GTR SPLAL A R++L D I I+P+ T GDR+ +R L EIGGK L+T Sbjct: 4 FRLGTRGSPLALTQAHMVRAALADAQGWDEDAIEIVPIKTTGDRVQDRALAEIGGKALWT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+++ L+ GEID +VHS KD+ T L I+A LPR D+RD I A+++ +L + Sbjct: 64 KELDRALLDGEIDASVHSMKDVETIRPDWLHIAAMLPRADVRDRLIG--AETIAELRPGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSS RR+A LL R D+++ RG ++TRL KL + + A LLA AG+ RL +E + Sbjct: 122 VVGTSSPRRRAQLLSHRPDLTITLLRGNVDTRLAKLASGEMDATLLAAAGLDRLGRE--V 179 Query: 186 KEILNIEDFPPSP 198 + + P+P Sbjct: 180 GHAVPTDQMLPAP 192 >gi|302879710|ref|YP_003848274.1| porphobilinogen deaminase [Gallionella capsiferriformans ES-2] gi|302582499|gb|ADL56510.1| porphobilinogen deaminase [Gallionella capsiferriformans ES-2] Length = 317 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 100/264 (37%), Positives = 152/264 (57%), Gaps = 2/264 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R L ++ P ++ I+ ++T+GD+I + +L++IGGKGLF +E Sbjct: 17 IASRESALAMWQAEHIRDRLRALY--PQTDVSILGMTTQGDQILDVSLSKIGGKGLFVKE 74 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L +G ++A RED D F+S+ ++L L SV+ Sbjct: 75 LETALEDGRADFAVHSLKDVPMVLPEGFVLAAIGEREDPHDAFVSNNYENLAALPAGSVV 134 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR++ L + + RG ++TRL KL+ AI+LA AG+KRL I+ Sbjct: 135 GTSSLRRESQLRARFPHLVIEPLRGNVQTRLRKLDEGLYAAIILAAAGLKRLGLATRIRA 194 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +++ ED P+ GQGA+ IE + ++ ++H DT V ERA L+GSC+ Sbjct: 195 VISSEDSLPAVGQGALGIECRADRLDVIAALQPLHHPDTAACVFAERAMSRALNGSCQVP 254 Query: 248 IAGFAYCKGSTLYFYGIVLASDGK 271 + GFA + L G V + DG+ Sbjct: 255 LGGFAEVQNGQLRMRGFVASPDGQ 278 >gi|157412912|ref|YP_001483778.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9215] gi|167008816|sp|A8G3L1|HEM3_PROM2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157387487|gb|ABV50192.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9215] Length = 318 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 98/269 (36%), Positives = 145/269 (53%), Gaps = 5/269 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +I +R S LA+ + L IP ++ I ++T+GD+I + L +IG KGLFT Sbjct: 6 LKIASRRSKLAMVQTLWVKDQLE--RNIPNLDVSIEAMATQGDKILDVALAKIGDKGLFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122 +E+E +++ G D AVHS KD+PT L GL++ RED D + + L+ L Sbjct: 64 KELEAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVSKKNDYYKLETLP 123 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S++GTSSLRR A L + D RG + TR+ KL+ + I+LA AG+KRL E Sbjct: 124 EGSIVGTSSLRRLAQLRNKYPHLVFKDIRGNVITRIEKLDAGEFDCIILAAAGLKRLGFE 183 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I +I+ E + GQGA+ IE ++ K E++ V+ + T ERAFL EL+G Sbjct: 184 SRIHQIIPSEISLHAVGQGALGIECKSDDKKVLEIINVLEDKPTSQRCLAERAFLRELEG 243 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 C+ I + LY G+V + DGK Sbjct: 244 GCQVPIGVNSNIDNGQLYLTGMVASLDGK 272 >gi|20089471|ref|NP_615546.1| porphobilinogen deaminase [Methanosarcina acetivorans C2A] gi|23821686|sp|Q8TT56|HEM3_METAC RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|19914376|gb|AAM04026.1| hydroxymethylbilane synthase [Methanosarcina acetivorans C2A] Length = 317 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 101/267 (37%), Positives = 150/267 (56%), Gaps = 9/267 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI-GGKGLFTE 66 IGTR S LALA E + L+ + +I II T GDR T+R L + GG G F Sbjct: 3 IGTRGSQLALAQT-ENVARLLKERGVE-TSIKII--KTSGDRFTDRPLHAVSGGVGAFVR 58 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 E++ +++GEID AVHS KDMPT +GL A L R+ D+ +++ +L +L ++ Sbjct: 59 ELDDVMLAGEIDIAVHSMKDMPTIRPEGLPTVAVLKRDTPFDILLTYDGTTLDELPEQAI 118 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGTSSLRR A + R+R D+ + RG I+TRL KL + ILLA AG++R+ E + Sbjct: 119 IGTSSLRRTAQIRRYRPDLITQELRGNIDTRLRKLKEGQYDGILLAKAGLERMGWE-IDG 177 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 EIL+ + F PSP QG + + T +P+ + V ++H ++ ER ++EL G C + Sbjct: 178 EILSPDFFCPSPNQGTVAVVTRA-DPEIEAAVSGLDHTESRIVTEIERILISELGGGCTT 236 Query: 247 AIAGFAYCKG--STLYFYGIVLASDGK 271 I +A ++ VL+ DGK Sbjct: 237 PIGSYAELTSDKQEIHIRAEVLSLDGK 263 >gi|213583404|ref|ZP_03365230.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 206 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 118/202 (58%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P Sbjct: 5 PGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVHSMKDVPVAFPD 64 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL DL S++GTSSLRR+ L R D+ + RG Sbjct: 65 GLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL KL+N AI+LA AG+KRL E I+ L + P+ GQGA+ IE +++ + Sbjct: 125 VGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTALPPDVSLPAVGQGAVGIECRLDDAR 184 Query: 214 AQELVKVINHEDTWDSVNCERA 235 Q L+ +NH T V ERA Sbjct: 185 TQALLAPLNHSQTALRVTAERA 206 >gi|32267226|ref|NP_861258.1| porphobilinogen deaminase [Helicobacter hepaticus ATCC 51449] gi|39931411|sp|Q7VFE9|HEM3_HELHP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|32263279|gb|AAP78324.1| porphobilinogen deaminase [Helicobacter hepaticus ATCC 51449] Length = 321 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 100/282 (35%), Positives = 157/282 (55%), Gaps = 6/282 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A +S L + +I T+GD+I + L +IGGKGLFT+E Sbjct: 13 IGSRGSILALWQAEYIKSCLKAQCGLQSRIQII---KTRGDKILDVPLAKIGGKGLFTKE 69 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+S +ID AVHS KD+P + + L ++A RE D F+S +L L + + Sbjct: 70 LEEMLLSKDIDLAVHSLKDVPVEFVPELDLAAITQRESANDCFLSVNYPNLNALPQGAKV 129 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKVIK 186 GT+SLRR + ++RSD+ + RG ++TRL KL+N AI+LA AG+ RLK + ++ Sbjct: 130 GTTSLRRSMQIKKYRSDLDTLSLRGNVQTRLEKLHNGAFDAIILAQAGVNRLKINTQDVR 189 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 I+ ++ P+ GQGA+ IE + + + V+N + + V+ ERAF+ L+G C+ Sbjct: 190 YIVPLDFMIPAMGQGALGIEMR-KDSIFFDRIAVLNDKQSALCVSAERAFVRTLEGGCQV 248 Query: 247 AIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNGNRCDAIN 287 I +A + L IV DG ++ + + D IN Sbjct: 249 PIGVYAQFSNNKLTLQAIVGLPDGSEVLQDSVEDSINIDDIN 290 >gi|126695860|ref|YP_001090746.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9301] gi|158513419|sp|A3PBM0|HEM3_PROM0 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|126542903|gb|ABO17145.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9301] Length = 316 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 101/295 (34%), Positives = 156/295 (52%), Gaps = 5/295 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +I +R S LA+ + L IP + I ++T+GD+I + L +IG KGLFT Sbjct: 6 LKIASRRSKLAMVQTLWVKDQLE--RNIPNLEVSIEAMATQGDKILDVALAKIGDKGLFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122 +E+E +++ G D AVHS KD+PT L GL++ RED D + + L+ L Sbjct: 64 KELEAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVNKKNDCYKLETLP 123 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S++GTSSLRR A L + D RG + TR+ KL+ + I+LA AG+KRL E Sbjct: 124 EGSIVGTSSLRRLAQLRNKYPHLIFKDIRGNVITRIEKLDAGEFDCIILAAAGLKRLGFE 183 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I +I+ E + GQGA+ IE ++ K E++ ++ + T ERAFL EL+G Sbjct: 184 SRIHQIIPSEISLHAVGQGALGIECKSDDKKVLEIINILEDKPTSQRCLAERAFLRELEG 243 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C+ I + + L G+V + DG+ + GN D IG++ A+ ++ Sbjct: 244 GCQVPIGVNSNIQNEKLCLTGMVASLDGERLIKDQHIGNINDPEEIGKELAKKLK 298 >gi|124022436|ref|YP_001016743.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9303] gi|158512753|sp|A2C7L8|HEM3_PROM3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123962722|gb|ABM77478.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9303] Length = 317 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 101/297 (34%), Positives = 158/297 (53%), Gaps = 9/297 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R S LA+ ++ L H P +I + ++T+GD+I + L +IG KGLFT Sbjct: 6 LRIASRRSQLAMVQTNWVQAELEQAH--PGLSISVEAMATQGDKILDVALAKIGDKGLFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122 +E+E +++ G D AVHS KD+PT L +GL + RED D + + L L Sbjct: 64 KELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVNQKNAEHQLDTLP 123 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A L + D RG + TRL KL+ ++LA AG+ RL Sbjct: 124 EGAIVGTSSLRRLAQLRHHYPHLVFKDVRGNVITRLEKLDAGNYDCLILAAAGLTRLGFG 183 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I +++ E + GQGA+ IE +P+ E++K + H+ T ERA L EL+G Sbjct: 184 DRIHQLIPSEISLHAVGQGALGIECVEGHPEVLEVIKALEHKPTAQRCLAERALLRELEG 243 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIR 297 C+ I + + + L G+V + DGK + G +RC+A IG++ A+ ++ Sbjct: 244 GCQVPIGVNSRIEANELLLTGMVASLDGKRLIRDQQRGPIDRCEA--IGKELAETLK 298 >gi|329848284|ref|ZP_08263312.1| porphobilinogen deaminase [Asticcacaulis biprosthecum C19] gi|328843347|gb|EGF92916.1| porphobilinogen deaminase [Asticcacaulis biprosthecum C19] Length = 311 Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 103/273 (37%), Positives = 153/273 (56%), Gaps = 13/273 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLM-----DVHK---IPPHNIVIIPLSTKGDRITNRTLTE 57 +IGTR S LAL + ++ DV + + P ++ +T+GDRI +R L E Sbjct: 4 LKIGTRGSKLALTQCGWVQRRIVAALGEDVARADEVAPLTVI----TTQGDRIQDRRLIE 59 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 GGK LFT+EIE L+ G+ID AVHS KDMP + GL + A RED RD F+S ++ Sbjct: 60 AGGKALFTKEIEDALLRGDIDVAVHSLKDMPAADVPGLSLCAIPVREDPRDAFLSPNYET 119 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L DL + +GT+S+RR+A L R D+ VI RG ++TRL KL A+LLA AG+ Sbjct: 120 LADLPQGARLGTASMRRQAQALAQRPDLQVIMTRGNVDTRLAKLQAGACDALLLAAAGLN 179 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I+ ++ + F +PGQGA+ I+ + A + KV + T+ + ER L Sbjct: 180 RLGLSHHIRSHIDPDLFASAPGQGALAIQCRTEDLGAGWMAKV-HDVTTFLRIQAERGAL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 L+ SC++A+ +A + L + L++DG Sbjct: 239 EALEASCRTAVGAYATLENDQLALFVEALSADG 271 >gi|302541659|ref|ZP_07294001.1| hydroxymethylbilane synthase [Streptomyces hygroscopicus ATCC 53653] gi|302459277|gb|EFL22370.1| hydroxymethylbilane synthase [Streptomyces himastatinicus ATCC 53653] Length = 311 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 97/304 (31%), Positives = 147/304 (48%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L + P ++P++T GDR L+++GGKG FT Sbjct: 7 IRIVSRSSPMALAQVERVRTELAALR--PGIRTEVVPVTTSGDRWMG-DLSKLGGKGAFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +AYL R+DIRD I +L + Sbjct: 64 KEVDAALLAGEADLAVHCIKDVPADRPLPAGTVFAAYLKRDDIRDAVIHPEGLTLDQMPE 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSS+RR A L + + RG RL K+ A++LA +G++R+ + Sbjct: 124 GTRIGTSSVRRVAQLAVTHPHVECVPMRGNANRRLEKMAAGDCDALMLAVSGLERIDRTD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI EIL +E P G G + ++ ++ E V + + W + ER L L G Sbjct: 184 VISEILPVETMCPPIGAGVLGLQCREDDTTTIEAVAGLGDTEVWKEITAERMLLHVLQGH 243 Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG+A + L V + DGK + D +G A + + Sbjct: 244 CNSPIAGYAKAERDGRLSLRARVFSPDGKTVLDAHEWAGPLDPATLGTSVAVALLRQGAR 303 Query: 303 NVFN 306 V + Sbjct: 304 EVID 307 >gi|284034243|ref|YP_003384174.1| porphobilinogen deaminase [Kribbella flavida DSM 17836] gi|283813536|gb|ADB35375.1| porphobilinogen deaminase [Kribbella flavida DSM 17836] Length = 294 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 95/289 (32%), Positives = 147/289 (50%), Gaps = 10/289 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++GTR S LA A A +L ++ H + ++P+ T GD + L +IGG G+F Sbjct: 2 IKLGTRRSALATAQAALVADALRNLG----HEVDLVPIVTTGD-VNRAPLEQIGGTGVFV 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + L++GEID AVHS KD+PT + GL + A RED RDV ++ +L +L + Sbjct: 57 SALRDALLAGEIDIAVHSLKDLPTAPVDGLTLGAIPVREDPRDVLVARDGLTLGELQTGA 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GT S RR A L + + RG ++TR+ + + K A++LA AG+ RL + I Sbjct: 117 LVGTGSPRRVAQLEALGLGLELTGIRGNVDTRIAMVADGKVDAVVLARAGLARLGRLAEI 176 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ P+PGQGA+ IE ++ + ++ T +V ER LA L+ C Sbjct: 177 TETLDPIQMLPAPGQGALGIECRSDDTAVLAALAPLDDPGTRAAVTAERQLLATLEAGCT 236 Query: 246 SAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 + + A G L+ G L DG +S NG+ D +GR Sbjct: 237 APVGALAEVVDGEDGPELWLRG-ALGEDGGGVRRLSANGSVDDPAAVGR 284 >gi|123210215|emb|CAM15095.1| hydroxymethylbilane synthase [Danio rerio] Length = 358 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 102/269 (37%), Positives = 143/269 (53%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA +L ++ P ++ I+ +ST GD+I + L++IG K LFT Sbjct: 19 IRMGTRKSQLARIQTDSVAGTLKQLY--PDVHLEIVAMSTIGDKILDTALSKIGEKSLFT 76 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A L RE+ D + H +L L Sbjct: 77 KELENALERNEVDIVVHSLKDLPTSLPPGFTIGAILERENPHDAVVLHPKNAGLTLDSLP 136 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI-KRLKK 181 SVIGTSSLRR A L + + + RG + TRL KL+ +A ++ A KR+ Sbjct: 137 EKSVIGTSSLRRAAQLKKRFPQLEFENIRGNLNTRLKKLDEKDDYAAIILAAAGLKRMGW 196 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I ++L ED + GQGA+ +E + E+V V++H DT ERAFL +L+ Sbjct: 197 ESRISQVLGPEDCMYAVGQGALAVEVRAQDKDILEMVSVLHHPDTVLRCISERAFLKQLE 256 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A KGS LY G V + DG Sbjct: 257 GGCSVPVAVHTEVKGSMLYLTGAVYSLDG 285 >gi|219848200|ref|YP_002462633.1| porphobilinogen deaminase [Chloroflexus aggregans DSM 9485] gi|219542459|gb|ACL24197.1| porphobilinogen deaminase [Chloroflexus aggregans DSM 9485] Length = 324 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 93/260 (35%), Positives = 143/260 (55%), Gaps = 14/260 (5%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 ++T GDR+ + L+ +G KGLF +E+E+ L++G++D VHSAKDMPT GL +SA+ Sbjct: 39 ITTTGDRVLDVALSAVGDKGLFVKELEQALLAGDVDLCVHSAKDMPTATPPGLMLSAFPV 98 Query: 103 REDIRDVFISHTAQSLKDLAL---HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159 RED RDV + A DLA + IGTSSLRR + L R D+ + D RG ++TRL Sbjct: 99 REDPRDVLVVRHADVGTDLATLPTGARIGTSSLRRASQLRYHRPDLHLNDVRGNVDTRLR 158 Query: 160 KLNNNKAHAILLAYAGIKRL---------KKEKVIKEILNIEDFPPSPGQGAICIETHVN 210 KL +++ A++LA AG++RL + L+ P+ QG + +ET + Sbjct: 159 KLASDQYDALILAAAGLRRLGLWDGTPGASIGAALVYPLDPSVMLPAVAQGILAVETRTD 218 Query: 211 NPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 + LV ++ + ERAFL L+G C+ +A A + L+F G+V A DG Sbjct: 219 DETTNRLVAALDDSAARTAALAERAFLRRLEGGCQIPVAAHAVLTEAGLHFRGMVGALDG 278 Query: 271 K--IFHEVSRNGNRCDAINI 288 +F E + + +A+ I Sbjct: 279 STLVFAEQVGDPAQPEAVGI 298 >gi|41056087|ref|NP_957448.1| hydroxymethylbilane synthase a [Danio rerio] gi|31419559|gb|AAH53268.1| Hydroxymethylbilane synthase a [Danio rerio] Length = 358 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 102/269 (37%), Positives = 142/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA +L ++ P + I+ +ST GD+I + L++IG K LFT Sbjct: 19 IRMGTRKSQLARIQTDSVAGTLKQLY--PDVRLEIVAMSTIGDKILDTALSKIGEKSLFT 76 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A L RE+ D + H +L L Sbjct: 77 KELENALERNEVDIVVHSLKDLPTSLPPGFTIGAILERENPHDAVVLHPKNAGLTLDSLP 136 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI-KRLKK 181 SVIGTSSLRR A L + + + RG + TRL KL+ +A ++ A KR+ Sbjct: 137 EKSVIGTSSLRRAAQLKKRFPQLEFENIRGNLNTRLKKLDEKDDYAAIILAAAGLKRMGW 196 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I ++L ED + GQGA+ +E + E+V V++H DT ERAFL +L+ Sbjct: 197 ESRISQVLGPEDCMYAVGQGALAVEVRAQDKDILEMVSVLHHPDTVLRCISERAFLKQLE 256 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A KGS LY G V + DG Sbjct: 257 GGCSVPVAVHTEVKGSMLYLTGAVYSLDG 285 >gi|291542328|emb|CBL15438.1| porphobilinogen deaminase [Ruminococcus bromii L2-63] Length = 286 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 95/250 (38%), Positives = 140/250 (56%), Gaps = 9/250 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LALA +L ++ P I + +ST GD+ ++ LT +GGKG+F Sbjct: 3 IKIGTRKSRLALAQTEMLIKTLK--NRFPNVKIETVYISTTGDKTLDKPLTALGGKGVFI 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+SGE D AVHSAKD+PTK+ GL+ISA LPR DVF++ KD Sbjct: 61 KELEMSLLSGETDVAVHSAKDLPTKIADGLEISAVLPRGSYGDVFVTRNNFETKD---GF 117 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL---KKE 182 VIGT SLRRK + + D RG ++TRL KL N + A++LA AG++RL E Sbjct: 118 VIGTGSLRRKLFAEKIYPNAKFKDIRGNVDTRLKKLLNGEYDALVLAKAGLERLDLCNGE 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + ++F P+P QG + IE+ N + +++ I+ ++T S ER L L+ Sbjct: 178 DYTVTPFDADEFLPAPCQGIVAIESR-KNSEVSKMLAEISDKNTMLSFETERQVLHSLNA 236 Query: 243 SCKSAIAGFA 252 C + + + Sbjct: 237 DCSTPVGAIS 246 >gi|311744366|ref|ZP_07718168.1| hydroxymethylbilane synthase [Aeromicrobium marinum DSM 15272] gi|311312332|gb|EFQ82247.1| hydroxymethylbilane synthase [Aeromicrobium marinum DSM 15272] Length = 311 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 91/296 (30%), Positives = 154/296 (52%), Gaps = 9/296 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + + +V + ++ +ST+GDR T L E+GG+G+F Sbjct: 8 LRLGTRASVLARTQSGHVADRITEVSG---RAVELVTISTEGDRSTG-PLAEMGGQGVFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + +G +D AVHS KD+PT L ++A PRED+RDV ++ +L +L + Sbjct: 64 AALREAVAAGHVDLAVHSLKDLPTAPDPRLALAAVPPREDVRDVVVARDGLTLGELPQGA 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGT S RR+A + + ++ RG ++TR+ K+ + + A++LA AG+ RL + Sbjct: 124 RIGTGSPRREAQINALGLGVEIVPIRGNVDTRIGKVASGEVDAVVLARAGLLRLGRADEA 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L+ P+PGQGA+ +E + + L+ ++ DT +V ER+ LA L+ C Sbjct: 184 TEVLDPIQVLPAPGQGALAVECRAGDDELIGLLAALDDADTRAAVTAERSLLAALEAGCS 243 Query: 246 SAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG-RDAAQYI 296 + + A G L+ +V G +S G +A +G R AA+ + Sbjct: 244 APVGALAEVAWGDDGDELWIRAVVADPSGSPTIRLSATGLPAEAAAVGERLAAEML 299 >gi|73668987|ref|YP_305002.1| porphobilinogen deaminase [Methanosarcina barkeri str. Fusaro] gi|121731279|sp|Q46CH0|HEM3_METBF RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|72396149|gb|AAZ70422.1| hydroxymethylbilane synthase [Methanosarcina barkeri str. Fusaro] Length = 316 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 103/267 (38%), Positives = 147/267 (55%), Gaps = 9/267 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG-GKGLFTE 66 IGTR S LALA A ET + L+ + +I T GDR T+R L + G G F Sbjct: 3 IGTRGSQLALAQA-ETVARLLKAKGVETSLKII---KTSGDRFTDRPLHAVSSGVGAFVR 58 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 E+++ ++ G+ID AVHS KDMPT L A L R+ D+ +++ L +L+ S+ Sbjct: 59 ELDEVMLEGKIDIAVHSMKDMPTIRPPTLPTVAVLKRDTPFDLLLTYDGTPLDELSEQSI 118 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGTSSLRR A + R+R D+ D RG I+TRL KL K ILLA AG++R+ E + Sbjct: 119 IGTSSLRRAAQIKRYRPDLVTQDLRGNIDTRLRKLKEGKYDGILLAKAGLERMGWE-LEG 177 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 EIL+ + F PSP QG I + T +A+ V ++H D+ + ER ++EL G C + Sbjct: 178 EILSPDFFCPSPNQGTIAVVTRAET-EAEAAVSRLDHTDSRIATEIERILISELGGGCTT 236 Query: 247 AIAGFAYCKGS--TLYFYGIVLASDGK 271 I +A L+ VL+ DG+ Sbjct: 237 PIGSYAEIMPDRKKLHVRAEVLSLDGE 263 >gi|33863541|ref|NP_895101.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9313] gi|39931399|sp|Q7V697|HEM3_PROMM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|33640990|emb|CAE21448.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9313] Length = 317 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 101/297 (34%), Positives = 157/297 (52%), Gaps = 9/297 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R S LA+ ++ L H P +I + ++T+GD+I + L +IG KGLFT Sbjct: 6 LRIASRRSQLAMVQTNWVQAELEQAH--PGLSISVEAMATQGDKILDVALAKIGDKGLFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122 +E+E +++ G D AVHS KD+PT L +GL + RED D + + L L Sbjct: 64 KELEAQMLVGRADIAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVNQKNAEHQLDTLP 123 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A L + D RG + TRL KL+ ++LA AG+ RL Sbjct: 124 EGAIVGTSSLRRLAQLRHHYPHLVFKDVRGNVITRLEKLDAGNYDCLILAAAGLTRLGFG 183 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I +++ E + GQGA+ IE +P+ E +K + H+ T ERA L EL+G Sbjct: 184 DRIHQLIPSEISLHAVGQGALGIECVEGHPEVLEAIKALEHKPTAQRCLAERALLRELEG 243 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIR 297 C+ I + + + L G+V + DGK + G +RC+A IG++ A+ ++ Sbjct: 244 GCQVPIGVNSRIEANELLLTGMVASLDGKRLIRDQQRGPIDRCEA--IGKELAETLK 298 >gi|184200499|ref|YP_001854706.1| porphobilinogen deaminase [Kocuria rhizophila DC2201] gi|183580729|dbj|BAG29200.1| porphobilinogen deaminase [Kocuria rhizophila DC2201] Length = 314 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 100/307 (32%), Positives = 159/307 (51%), Gaps = 14/307 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M F +GTR S LA+ + ++ I H +V + T+GD +T L+++GG Sbjct: 1 MSGAVFTVGTRGSQLAMTQSRWAAEAVSRAGGID-HELVTV--RTEGDVLTG-PLSQMGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + +++ G +D AVHS KD+PT ++GL+I A RED RD + +L + Sbjct: 57 TGVFATALRSQVLDGRVDLAVHSLKDLPTAPVEGLRIVALPEREDPRDALCARDGLTLAE 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL---NNNKAHAILLAYAGIK 177 L + +GT S RR A L R D+ ++D RG + TRLN++ + A++LA +G+K Sbjct: 117 LPEGAAVGTGSPRRVAQLRALRPDLRIVDIRGNVGTRLNRVAPADPGDLDAVVLAASGLK 176 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK---VINHEDTWDSVNCER 234 RL E I E L+ P+PGQGA+ +E + L++ ++H T +V ER Sbjct: 177 RLGLEGRITEYLDPHVMLPAPGQGALALEVSARLDPSGALMRGLEAVDHLPTRLAVTAER 236 Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 A LA+L+ C + + FA G L +V DG EV R A ++ +A Sbjct: 237 AVLAQLEAGCAAPVGTFARVAGDVLELDVVVANPDGS---EVMRRSESVPAPSV-EEAEA 292 Query: 295 YIRFISN 301 + R I++ Sbjct: 293 FGRRIAD 299 >gi|315453028|ref|YP_004073298.1| porphobilinogen deaminase [Helicobacter felis ATCC 49179] gi|315132080|emb|CBY82708.1| porphobilinogen deaminase [Helicobacter felis ATCC 49179] Length = 305 Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 98/266 (36%), Positives = 145/266 (54%), Gaps = 5/266 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L + IV TKGD+I + L +IGGKGLFT+E Sbjct: 7 IGSRGSALALWQARHVQELLKPLGLESEIKIV----KTKGDKILDVPLAKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L+ G+ID AVHS KD+P L +GL ++ R + +D F+S+ +L+ L ++ I Sbjct: 63 LEVLLLGGKIDLAVHSLKDVPVDLQEGLVLACVSARANPQDCFLSYKYPNLQALPPNARI 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+SLRR L R+D + RG ++ RL +L AI+LA AG++RL E + Sbjct: 123 GTTSLRRAMQLKALRTDTDPLSLRGNVQRRLERLQRGDFEAIILACAGVERLGLELPYRV 182 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 L++E+ PS GQGA+ IE N+P ++ +N ++ ER F+ L G C+ Sbjct: 183 PLSLEEMIPSMGQGALGIEMRANHPLLDQITS-LNDPNSALCCGLERDFVRALGGGCQVP 241 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIF 273 + A +G + IV DGK F Sbjct: 242 LGVHARLQGEHIEMRAIVGLVDGKTF 267 >gi|123968087|ref|YP_001008945.1| porphobilinogen deaminase [Prochlorococcus marinus str. AS9601] gi|158513952|sp|A2BPX7|HEM3_PROMS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123198197|gb|ABM69838.1| Porphobilinogen deaminase [Prochlorococcus marinus str. AS9601] Length = 316 Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 99/295 (33%), Positives = 157/295 (53%), Gaps = 5/295 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +I +R S LA+ + L IP + I ++T+GD+I + L +IG KGLFT Sbjct: 6 LKIASRRSKLAMVQTLWVKDQLE--KNIPNLEVSIEAMATQGDKILDVALAKIGDKGLFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122 +E+E +++ G D AVHS KD+PT L GL++ RED D + + L++L Sbjct: 64 KELEAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVNKKNDCYKLENLP 123 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S++GTSSLRR A L + D RG + TR+ KL+ + I+LA AG+KRL E Sbjct: 124 EGSIVGTSSLRRLAQLRNKYPHLVFKDIRGNVITRIEKLDAGEFDCIILAAAGLKRLGFE 183 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I +I+ E + GQGA+ IE ++ K E++ ++ + T ERAFL EL+G Sbjct: 184 SRIHQIIPSEVSLHAVGQGALGIECKSDDKKVLEIISILEDKPTCQRCLAERAFLRELEG 243 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C+ I + + L G+V + DG+ + G+ D +G++ A+ ++ Sbjct: 244 GCQVPIGVNSKIQNEQLCLTGMVASLDGERLIKDQYIGDINDPEEVGKELAKKLK 298 >gi|146298706|ref|YP_001193297.1| porphobilinogen deaminase [Flavobacterium johnsoniae UW101] gi|146153124|gb|ABQ03978.1| porphobilinogen deaminase [Flavobacterium johnsoniae UW101] Length = 307 Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 101/300 (33%), Positives = 159/300 (53%), Gaps = 15/300 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K RIGTR S LAL A L D+ + I+ + ++GD I ++ L E+G Sbjct: 1 MAEKTIRIGTRDSELALWQAHNVEKKLNDLG----YKTSIVAVKSQGDIILDKPLYELGI 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ +I+G+ID AVHS KD+PT L KG+ A LPR ++ D+ + H D Sbjct: 57 TGIFTKTLDIAMINGDIDIAVHSMKDVPTALPKGIVQGAVLPRANVLDILV-HKGNP--D 113 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR-- 178 S I T SLRR+A + +V+D RG + TR+ KL +N + A AG++R Sbjct: 114 FTNPSTIATGSLRRQAQWFNKYPNHTVVDLRGNVNTRMQKLQDNNWDGAVFAAAGLERIN 173 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 LK E I N++ P+P QGA+ + N+ + + +N +T + ER FL Sbjct: 174 LKPENYI----NLDWMIPAPAQGAMLVVGMENDNYTLDALSQLNDIETEICTHIERQFLR 229 Query: 239 ELDGSCKSAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L+G C + I TL+F G++L+ DGK E+++ + + +G ++AQ I Sbjct: 230 TLEGGCTAPIGALVTYNEDEDTLHFQGVLLSIDGKQKLEINKTVDISEWKKLGFNSAQEI 289 >gi|148241995|ref|YP_001227152.1| porphobilinogen deaminase [Synechococcus sp. RCC307] gi|158513324|sp|A5GSE0|HEM3_SYNR3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|147850305|emb|CAK27799.1| Porphobilinogen deaminase [Synechococcus sp. RCC307] Length = 317 Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 105/302 (34%), Positives = 152/302 (50%), Gaps = 9/302 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ R L + H P I I ++T+GD+I + L +IG Sbjct: 1 MTASSLRIASRRSQLAMVQTEWVRDELANAH--PGLEISIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + H KD Sbjct: 59 KGLFTKELEAQMLVNRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVMHAKN--KD 116 Query: 121 LALHS-----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 L L + V+GTSSLRR A L ++ D RG + TRL KL++ + ++LA AG Sbjct: 117 LTLATLPEGAVVGTSSLRRLAQLRYHYPHLTFKDVRGNVITRLEKLDSGQFDCLILAAAG 176 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + RL I E+++ + GQGA+ IE + E +KV+ H T ERA Sbjct: 177 LGRLGLGDRIHELIDPSISLHAVGQGALGIECRDGDAAVLEQIKVLEHRPTSLRCLAERA 236 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 FL L+G C+ I +G L G+V + DGK + A ++G A+ Sbjct: 237 FLRTLEGGCQVPIGVNTRFEGDELVLTGMVASLDGKQLIRDELRAPQDQAEDLGNRLAEL 296 Query: 296 IR 297 +R Sbjct: 297 LR 298 >gi|126326558|ref|XP_001370512.1| PREDICTED: similar to Porphobilinogen deaminase (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) (PBG-D) [Monodelphis domestica] Length = 344 Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 102/269 (37%), Positives = 142/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L D++ P II +ST GD+I + L++IG K LFT Sbjct: 4 IRVGTRKSQLARIQTDSVVAMLKDIY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L I A RE D I H T Q+L L Sbjct: 62 KELEYALEKNEVDLVVHSLKDLPTVLPPAFTIGAVCKRESPYDAVIFHPKYTGQTLGTLP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181 SVIGTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 122 ERSVIGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILAAAGLQRMGW 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + ++L E+ + GQGA+ +E + + +LV+V++ +T ERAFL L+ Sbjct: 182 QSRVGQLLYPEECLYAVGQGALGVEVRAKDQEVLDLVQVLHDPETLLRCIAERAFLRHLE 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 242 GGCSVPVAVDTTLKDGQLYLTGGVWSLDG 270 >gi|222823771|ref|YP_002575345.1| porphobilinogen deaminase [Campylobacter lari RM2100] gi|254800239|sp|B9KGA9|HEM3_CAMLR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|222538993|gb|ACM64094.1| porphobilinogen deaminase [Campylobacter lari RM2100] Length = 308 Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 91/244 (37%), Positives = 145/244 (59%), Gaps = 5/244 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL + ++ L H I + TKGD + + L +IGGKGLFT+E Sbjct: 5 IATRKSQLALWQSEYIKNKLSQTH--SDLEISLEGFKTKGDVLLDSPLAKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ ++ G+ AVHS KD+P+ KGL ++A RE++ D F+S +SL L + + Sbjct: 63 LEESMLRGDSHLAVHSLKDVPSFFPKGLVLAAISKREEVNDAFLSEYYESLNALPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+SLRR+ LL R D+++I RG I +RL KL + AI+LA+AGIKRL EK IK Sbjct: 123 GTTSLRRRMQLLALRPDLNIISLRGNINSRLEKLKAKEFDAIILAFAGIKRLGLEKQIKF 182 Query: 188 I--LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + +++ P+ QGA+ IE+ +++ + + ++ +N ++ + + ER F+ L+G C+ Sbjct: 183 VKKFELDEMIPAASQGALGIES-IDDKQILKYLECLNDKNAFVETHIERDFIKTLEGGCQ 241 Query: 246 SAIA 249 I Sbjct: 242 VPIG 245 >gi|148259148|ref|YP_001233275.1| porphobilinogen deaminase [Acidiphilium cryptum JF-5] gi|146400829|gb|ABQ29356.1| porphobilinogen deaminase [Acidiphilium cryptum JF-5] Length = 333 Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 108/312 (34%), Positives = 157/312 (50%), Gaps = 11/312 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHK---IPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 P R+GTR SPLAL ++L ++ P +ST GDR+T+R L EIGGK Sbjct: 20 PLRVGTRGSPLALRQTDMFLAALREICPALGFAPDAFAPEIISTTGDRVTDRPLAEIGGK 79 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-------SHT 114 GLF +EI + L+ G ID AVHS KD+ T L G+ ++ + RED RD I + Sbjct: 80 GLFAKEIHEALLDGRIDFAVHSLKDLETALPDGIILACTMKREDARDALILADGLGPVND 139 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 L + +GTSS+RR+A LL R D+ + RG + TRL+ A LLA A Sbjct: 140 GDIWSSLPKGARVGTSSVRRQAQLLHARPDLQIGLLRGNVRTRLDAARIGTFDATLLALA 199 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G++RL E+ + ++ E P+ QG + I + + EL+ I + + ER Sbjct: 200 GLRRLGFEEEVAAAIDPEAMVPAACQGIVGITVRAADSRLAELLAAIENHEAKAVSKAER 259 Query: 235 AFLAELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 A LA LDGSC++ I G A L+ G+ DG + S N DA+ +G + Sbjct: 260 ALLAALDGSCRTPIGGHARLLPDGNLHLTGLTARPDGSFLLKRSEVANAADAVRLGAELG 319 Query: 294 QYIRFISNKNVF 305 +R S ++F Sbjct: 320 ASLRRDSPADIF 331 >gi|284992946|ref|YP_003411500.1| porphobilinogen deaminase [Geodermatophilus obscurus DSM 43160] gi|284066191|gb|ADB77129.1| porphobilinogen deaminase [Geodermatophilus obscurus DSM 43160] Length = 312 Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 91/295 (30%), Positives = 151/295 (51%), Gaps = 8/295 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + ++ +P + ++ +ST+GDR ++ + ++GG G+F Sbjct: 9 LRLGTRASQLATTQSQAVADAITAASGVP---VELVHISTEGDR-SSVAIAQLGGTGVFV 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 I + L+ G +D AVHS KD+PT GL I+A PRED RD ++ +L +L + Sbjct: 65 TAIRQALLEGTVDVAVHSYKDLPTLPEPGLTIAAVPPREDPRDALVARDGLTLGELPAGA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT + RR A L + V+ RG ++TR+ ++ A++LA AG+ RL + + Sbjct: 125 RVGTGAPRRVAQLRALGLGLEVVPIRGNVDTRMARVVPGDLDAVVLARAGLSRLGRLSAV 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ P+P QGA+ +E N+ + ++L+ ++ T V ER LA L+ C Sbjct: 185 TETLDPLQVLPAPAQGALAVECRGNDERTRQLLAALDDAATRACVVAERTTLAALEAGCS 244 Query: 246 SAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + +A +A G L+ V A DG S G +A +GR+ A + Sbjct: 245 APVAAYAEVAEGEDGPELFLRASVTALDGSDGVRGSITGPPPEAERLGRELAAEL 299 >gi|237751827|ref|ZP_04582307.1| porphobilinogen deaminase [Helicobacter bilis ATCC 43879] gi|229373193|gb|EEO23584.1| porphobilinogen deaminase [Helicobacter bilis ATCC 43879] Length = 328 Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 101/260 (38%), Positives = 145/260 (55%), Gaps = 17/260 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 +++KP +GTR S LAL A + L + +V+ + TKGD+I + L +IGG Sbjct: 10 VQEKPLVLGTRGSLLALWQANHIKEKLESLG----FQVVLKTIKTKGDKILDAPLAKIGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E +L+SG ID AVHS KD+P + L + + RED RD F+S + Sbjct: 66 KGLFTKELENELLSGGIDFAVHSLKDVPIAIPPELMLVSITQREDARDCFVSEKYADIAS 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRR L R R D+ RG ++TRL KL + AI+LA AG+ RL Sbjct: 126 LPQGAKVGTTSLRRSMQLKRIRQDLDTQSLRGNVQTRLEKLRKGEFDAIILASAGLNRLD 185 Query: 181 KEKVIKEI--LNIEDFPPSPGQGAICIETHVNNPKA------QELVKVINH-EDTWDSVN 231 + I I L I F P+ GQG++ IE +PK Q ++KV+ D+ ++ Sbjct: 186 LKDDIGFISHLQINQFIPAMGQGSLGIECR--DPKYSPDFRDQAIMKVLESLHDSKSALC 243 Query: 232 C--ERAFLAELDGSCKSAIA 249 C ERAF+ L G C+S I Sbjct: 244 CNIERAFIQLLGGGCQSPIG 263 >gi|223939088|ref|ZP_03630972.1| porphobilinogen deaminase [bacterium Ellin514] gi|223892248|gb|EEF58725.1| porphobilinogen deaminase [bacterium Ellin514] Length = 332 Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 102/294 (34%), Positives = 150/294 (51%), Gaps = 38/294 (12%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG---G 60 KP I TR S LALA A S P +I + + T GD++ +L + G Sbjct: 7 KPIFIATRGSALALAQANAVLSQCRSA--FPKLDIELKIIKTTGDKLQKASLAKEGESLP 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---- 116 KGLFT+E+E L++G+ D AVHS KD+PT+L GL + A R D+RDV + A+ Sbjct: 65 KGLFTKELEVALLNGDADIAVHSLKDLPTELPTGLILGAVSKRADVRDVLVYRDAEYLRS 124 Query: 117 --------------SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 ++KD + + TSS RRKA LL R D++V++ RG + TRL KL Sbjct: 125 QPGKSNRRGFTPKLAIKDFPPGATVATSSTRRKAQLLAQRGDLNVVEIRGNVATRLEKLA 184 Query: 163 NN-KAHAILLAYAGIKRLK--------------KEKVIKEILNIEDFPPSPGQGAICIET 207 N + A +LA AG++RL E ++ IL+ + P GQ A+ +E Sbjct: 185 NQPELDATVLAAAGLERLNFKITAEGKLAGEGIPEGLLATILDFDVMLPCVGQAALGMEI 244 Query: 208 HVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYF 261 N+ + QE+ +NH +T V ER+FL+ + G C+S +A +A G L Sbjct: 245 RENDARIQEICDRLNHPETHACVLAERSFLSGMGGGCQSPVAAYAEIAGDQLQM 298 >gi|87123876|ref|ZP_01079726.1| Porphobilinogen deaminase [Synechococcus sp. RS9917] gi|86168445|gb|EAQ69702.1| Porphobilinogen deaminase [Synechococcus sp. RS9917] Length = 317 Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 103/293 (35%), Positives = 149/293 (50%), Gaps = 5/293 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALEHLRIASRRSQLAMVQTNWVKAELEQAH--PGLPISVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS--- 117 KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + + + Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNAKNADHK 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L +V+GTSSLRR A L + D RG + TRL KL+ ++LA AG+ Sbjct: 119 LETLPEGAVVGTSSLRRLAQLRHHYPHLEFKDVRGNVITRLEKLDAGDYDCLILAAAGLT 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +I+ + GQGA+ IE P EL+KV+ H T ERAFL Sbjct: 179 RLGFADRIHQIIPSHISLHAVGQGALGIECVEGQPDVLELIKVLEHSPTASRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 EL+G C+ I + + L G+V + DGK R G A IG+ Sbjct: 239 RELEGGCQVPIGVNTRIEANELVLTGMVASLDGKRLIRDERRGTVDKAEAIGQ 291 >gi|225389494|ref|ZP_03759218.1| hypothetical protein CLOSTASPAR_03242 [Clostridium asparagiforme DSM 15981] gi|225044437|gb|EEG54683.1| hypothetical protein CLOSTASPAR_03242 [Clostridium asparagiforme DSM 15981] Length = 301 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 102/300 (34%), Positives = 154/300 (51%), Gaps = 15/300 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+ +SL + P + + T GD+I N+ L E GGKG+F Sbjct: 5 IRIGTRNSRLAMIQTEMVAASLREAA--PGIQVSLEARMTTGDKILNKPLQEFGGKGVFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E E+ ++ G +D AVHSAKDMP +L +GL I RED RDV ++ + + Sbjct: 63 SEFEEGILEGRLDLAVHSAKDMPMELAEGLSIVGVPMREDPRDVLVTAAGRPVPKTG-EI 121 Query: 126 VIGTSSLRRKALL------LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR- 178 VIGTSS RRK + L + + RG ++TRL KL + H I+LA AG+KR Sbjct: 122 VIGTSSPRRKLQIELLGTNLWPGGSVRCENLRGNVQTRLGKLESGMYHGIILAAAGLKRL 181 Query: 179 --LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 L+ + + L E F P+ GQG + +E +A ++ I+H +TW +N ER Sbjct: 182 GLLEDPRYNFQFLECESFVPAGGQGILAVEGRAEG-RAAGILSGISHRETWLCLNLERQV 240 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L LD C I ++ + L +GI +G+++ ++ G +A + R AA+ + Sbjct: 241 LKLLDAGCHEPIGVYSRLEDGLLEVFGIS-GRNGRVY-KIHLKGQPEEAGELARRAAEGL 298 >gi|21225618|ref|NP_631397.1| porphobilinogen deaminase [Streptomyces coelicolor A3(2)] gi|289767234|ref|ZP_06526612.1| porphobilinogen deaminase [Streptomyces lividans TK24] gi|11386841|sp|Q9KY00|HEM32_STRCO RecName: Full=Porphobilinogen deaminase 2; Short=PBG 2; AltName: Full=Hydroxymethylbilane synthase 2; Short=HMBS 2; AltName: Full=Pre-uroporphyrinogen synthase 2 gi|8246838|emb|CAB92889.1| porphobilinogen deaminase [Streptomyces coelicolor A3(2)] gi|289697433|gb|EFD64862.1| porphobilinogen deaminase [Streptomyces lividans TK24] Length = 313 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 98/291 (33%), Positives = 143/291 (49%), Gaps = 6/291 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT Sbjct: 9 IRIVSRDSPMALAQVERVRAELAALH--PGVRTEVVPVRTTGDKWLG-DLSQVEGKGAFT 65 Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L+SGE D AVH KD+P L G +A+L R+D+RD + +L +L Sbjct: 66 KEVDAALLSGEADLAVHCVKDVPADRPLPAGTVFAAFLKRDDVRDALVHPDGLTLDELPD 125 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSS+RR A L + + FRG RL KL +A A+LLA +G++R+ + Sbjct: 126 GTRVGTSSVRRVAQLAATHPHLRCVPFRGNANRRLAKLAAGEADALLLAVSGLERIGRTD 185 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI E+L+ E P G G + ++ + E V + T ER FL L G Sbjct: 186 VISEVLSTETMMPPIGAGILALQCREGDRALIEAVSALGDPRTHREATAERMFLHVLQGH 245 Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 C S IAG A + L V DGK+ R D +G A Sbjct: 246 CNSPIAGHAQVDRSGELSLRACVFTPDGKVRLNAHEWAGRLDPATLGTSVA 296 >gi|33239945|ref|NP_874887.1| porphobilinogen deaminase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|39931408|sp|Q7VD89|HEM3_PROMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|33237471|gb|AAP99539.1| Porphobilinogen deaminase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 315 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 102/300 (34%), Positives = 157/300 (52%), Gaps = 5/300 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ + L P +I I ++T+GD+I + L +IG Sbjct: 1 MALDQVRIASRRSQLAMVQTNWVKEELEKA--CPSIDISIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117 KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + + Sbjct: 59 KGLFTKELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCITKREDPADALVVNKKYKNYQ 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L DL SV+GTSSLRR A L + D RG + TRL KL++ + ++LA AG+ Sbjct: 119 LNDLPEGSVVGTSSLRRLAQLRHHYPGLIFKDVRGNVITRLEKLDSGEYDCLILAAAGLT 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +++ E + GQGA+ IE + + +++KV+ H+++ ERAFL Sbjct: 179 RLGFGNRIHQLIPSEISLHAVGQGALGIECVKDKEEILQIIKVLEHKESSLRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + +G L G+V + DGK ++ G+ IG + A ++ Sbjct: 239 KELEGGCQVPIGVNSKIQGQELILTGMVASLDGKQLIRDTKTGSSMHPETIGIELANTLK 298 >gi|221134062|ref|ZP_03560367.1| porphobilinogen deaminase [Glaciecola sp. HTCC2999] Length = 328 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 95/247 (38%), Positives = 142/247 (57%), Gaps = 5/247 (2%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P ++ ++P+STKGDRI + L ++GGKGLF +E+E + G D AVHS KD+P + + Sbjct: 16 PDMSVNLVPMSTKGDRILDTPLAKVGGKGLFIKELEVAMQEGRADIAVHSMKDVPVEFPE 75 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 G + A PRE+ D F+S+T + L +V+GTSSLRR+A L R D+++ D RG Sbjct: 76 GFGLHAICPRENPFDAFVSNTYDDIDSLPKGAVVGTSSLRRQAQLRARRPDLTIKDLRGN 135 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL KL+ + AI+LA AG+ RLK I+ ++ P+ GQGA+ IE +N Sbjct: 136 VNTRLAKLDAGEYDAIILACAGLIRLKMHDRIRSEIDPLTSLPAVGQGAVGIECRDDNLA 195 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLAS 268 ++++ + +T V ERA A+L G C+ I FA + S LY G+V Sbjct: 196 LIDVLQCLACPETTIRVMAERAMNAKLQGGCQVPIGSFATLETSQDGYRELYLKGLVATV 255 Query: 269 DGKIFHE 275 DG + E Sbjct: 256 DGSVLLE 262 >gi|325286453|ref|YP_004262243.1| porphobilinogen deaminase [Cellulophaga lytica DSM 7489] gi|324321907|gb|ADY29372.1| porphobilinogen deaminase [Cellulophaga lytica DSM 7489] Length = 525 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 103/294 (35%), Positives = 152/294 (51%), Gaps = 8/294 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LAL A +S L + I+ + + GD ++ L E+G G+ Sbjct: 3 KIIRIGTRDSELALYQANRVKSELETLG----FKTKIVAVKSAGDLELDKPLYELGITGI 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT ++ ++ GEID AVHS KD+PT L KG+ +A L R +++D + + A Sbjct: 59 FTRTLDIAMLKGEIDIAVHSLKDVPTVLPKGIVQAAVLERGNVKDTLVYKNNEEFLG-AR 117 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKKE 182 VI TSSLRRKA L V D RG + TRL KL +++ + + A AGI RL Sbjct: 118 DGVIATSSLRRKAQWLNRYPTHKVEDIRGNVNTRLQKLEDSETWNGAIFAAAGIGRLNLR 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +E +N++ P+PGQGAI + + + + + INH +T ER FL L+G Sbjct: 178 P--EEAVNLDWMIPAPGQGAIMVTAKEDEEEILAICEEINHRETEICTTIERTFLNRLEG 235 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C + I AY K + F ++L+ DG EV R D N+ +AA+++ Sbjct: 236 GCTAPIGALAYIKSEQVIFRAVLLSPDGTKKIEVDRLVKLGDHNNLAIEAAEHV 289 >gi|124025263|ref|YP_001014379.1| porphobilinogen deaminase [Prochlorococcus marinus str. NATL1A] gi|158512743|sp|A2C0V4|HEM3_PROM1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123960331|gb|ABM75114.1| Porphobilinogen deaminase [Prochlorococcus marinus str. NATL1A] Length = 315 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 103/300 (34%), Positives = 153/300 (51%), Gaps = 5/300 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ R L H P I I ++T+GD+I + L +IG Sbjct: 1 MTLDQLRIASRRSQLAMVQTNWVRDELQRAH--PDLAITIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117 KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + + Sbjct: 59 KGLFTKELEAQMLLGHAEIAVHSLKDLPTNLPEGLILGCITEREDPSDALVVNEKNQIHK 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L SV+GTSSLRR A L + D RG + TRL KL++ + ++LA AG++ Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRYHYPHLVFKDVRGNVITRLEKLDSGEYDCLILAAAGLQ 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +++ + + GQGA+ IE K +++K + HE T ER+FL Sbjct: 179 RLGFANRIHQLIPTDISLHAVGQGALGIECVSGQQKVLDILKTLEHESTSKRCLAERSFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + L G+V + DGK + G+ A IG D A ++ Sbjct: 239 RELEGGCQVPIGVRTEINNNELILEGMVASLDGKRLIRDIKKGSVSSAEEIGIDLANELK 298 >gi|241663752|ref|YP_002982112.1| porphobilinogen deaminase [Ralstonia pickettii 12D] gi|240865779|gb|ACS63440.1| porphobilinogen deaminase [Ralstonia pickettii 12D] Length = 338 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 100/264 (37%), Positives = 150/264 (56%), Gaps = 3/264 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LAL A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF +E Sbjct: 28 IASRESRLALWQAEHVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLFVKE 85 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P +L +G +S L RED RD F+S+ L L +V+ Sbjct: 86 LEVALAEGRADLAVHSLKDVPMQLPEGFALSTILEREDPRDAFVSNDYADLASLPAGAVV 145 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A L + + RG ++TRL KL+ AI+LA AG++RL I+ Sbjct: 146 GTSSLRREASLRARFPHLVIQPLRGNLDTRLGKLDRGDYAAIILAAAGLRRLGLADRIRS 205 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + E+ P+ GQGA+ IE + + + + ++ T +V ERA L GSC+ Sbjct: 206 TIAPEESLPAAGQGALGIEIRADREEVRACLAPLHDAPTALAVTAERAVSRILGGSCQVP 265 Query: 248 IAGFAYCKGS-TLYFYGIVLASDG 270 +A FA G+ TL V + DG Sbjct: 266 LAAFAQWSGAGTLRLRAFVASQDG 289 >gi|33520023|ref|NP_878855.1| porphobilinogen deaminase [Candidatus Blochmannia floridanus] gi|39931423|sp|Q7VRM4|HEM3_BLOFL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|33504369|emb|CAD83262.1| porphobilinogen deaminase [Candidatus Blochmannia floridanus] Length = 311 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 99/275 (36%), Positives = 144/275 (52%), Gaps = 5/275 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGD-RITNRTLTEI 58 M+ K RI TR SPLA+ A + L H PH +IP+ T GD + + T Sbjct: 1 MQAKILRIATRKSPLAICQACYVCNKLKHYH---PHIQTELIPIITTGDTSLHTVSKTNK 57 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 KG F +E+E LI D AVHS KD+ L K L I R D RD F+S ++ Sbjct: 58 IKKGAFIKELEYALIEHRADIAVHSMKDVTVLLPKELIIPVLCKRHDPRDAFVSIQYPNI 117 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L S+IGTSSLRR+ + RSD+ + D RG I TR+ KL+ + +AI+LA AG+ R Sbjct: 118 HSLPTGSIIGTSSLRRQCQIRAQRSDLILHDLRGNINTRIKKLHQGQYNAIILAVAGLTR 177 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 LK K I+ ++ + P+ GQG I IE +N+ L+ + H++T + ERA Sbjct: 178 LKLTKYIQTYIDPSELLPAMGQGVIAIECRINDINTISLLSPLYHKETSLCIKSERAVTT 237 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 L+ C+ IA +A + + ++ ++ DG I Sbjct: 238 YLESYCRLPIASYAEIQNNQIWLRALIGLPDGSII 272 >gi|256783360|ref|ZP_05521791.1| porphobilinogen deaminase [Streptomyces lividans TK24] Length = 311 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 98/291 (33%), Positives = 143/291 (49%), Gaps = 6/291 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT Sbjct: 7 IRIVSRDSPMALAQVERVRAELAALH--PGVRTEVVPVRTTGDKWLG-DLSQVEGKGAFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L+SGE D AVH KD+P L G +A+L R+D+RD + +L +L Sbjct: 64 KEVDAALLSGEADLAVHCVKDVPADRPLPAGTVFAAFLKRDDVRDALVHPDGLTLDELPD 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSS+RR A L + + FRG RL KL +A A+LLA +G++R+ + Sbjct: 124 GTRVGTSSVRRVAQLAATHPHLRCVPFRGNANRRLAKLAAGEADALLLAVSGLERIGRTD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI E+L+ E P G G + ++ + E V + T ER FL L G Sbjct: 184 VISEVLSTETMMPPIGAGILALQCREGDRALIEAVSALGDPRTHREATAERMFLHVLQGH 243 Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 C S IAG A + L V DGK+ R D +G A Sbjct: 244 CNSPIAGHAQVDRSGELSLRACVFTPDGKVRLNAHEWAGRLDPATLGTSVA 294 >gi|302556915|ref|ZP_07309257.1| porphobilinogen deaminase [Streptomyces griseoflavus Tu4000] gi|302474533|gb|EFL37626.1| porphobilinogen deaminase [Streptomyces griseoflavus Tu4000] Length = 311 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 98/291 (33%), Positives = 143/291 (49%), Gaps = 6/291 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L P ++P+ T GD+ L+ + GKG FT Sbjct: 7 IRIVSRDSPMALAQVERVRAELAAAR--PGVRTEVVPVKTTGDKWLG-DLSAVEGKGAFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++G D AVH KD+P L G +A+L R+D+RD + +L +LA Sbjct: 64 KEVDAALLAGRADVAVHCVKDVPADRPLPAGTVFAAFLKRDDVRDALVHPDGLTLDELAP 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSS+RR A L ++ + RG R+ KL +A A+LLA +G++R+ + Sbjct: 124 GTRIGTSSVRRVAQLAVSHPHLTCVPLRGNANLRMEKLAAGEADALLLAVSGLERIGRAD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI E+L+ E P G G + ++ + E V + H DT ER FL L G Sbjct: 184 VISEVLSPEAMMPPIGAGILALQCREGDTALIEAVSALGHPDTHREATAERMFLHVLQGH 243 Query: 244 CKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 C S IAG+A S L V +DGK R D +G A Sbjct: 244 CNSPIAGYAQVDLSGELSLRACVFTADGKTRLNAHEWAGRLDPATLGTSVA 294 >gi|256397425|ref|YP_003118989.1| porphobilinogen deaminase [Catenulispora acidiphila DSM 44928] gi|256363651|gb|ACU77148.1| porphobilinogen deaminase [Catenulispora acidiphila DSM 44928] Length = 317 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 90/295 (30%), Positives = 153/295 (51%), Gaps = 7/295 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++ R+GTR S LALA + +L + ++ ++T GD + L+ IGG G Sbjct: 16 ERALRLGTRASTLALAQSGMVAEALTAATG---RAVELVHVTTYGD-TSREALSVIGGTG 71 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F + + + +G++D AVHS KD+PT +GL ++A R + D ++ L DL Sbjct: 72 VFVNALREAIYAGDVDFAVHSLKDLPTAAPEGLHLAAITERAAVNDALVARDGLKLADLP 131 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GT + RR ALL R D+ ++ RG ++TR+N + + A+++A AG++RL + Sbjct: 132 AGAKVGTGAARRMALLKMIRPDLEIVPIRGNVDTRVNHVRSGDLDAVVVALAGLQRLGRA 191 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + E+ + PSPGQGA+ +E +P+ EL+ V++ T +V ER LA L+ Sbjct: 192 EEATEVFGPDVILPSPGQGALAVEC--KDPELAELLAVLDSPLTRAAVVAERTMLAVLEA 249 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C + + G A + L G+V G +S G + +GR AQ + Sbjct: 250 GCSAPVGGHAIALDDNVLSLTGVVATVSGSRGLRLSHAGAVSEPEALGRRVAQAL 304 >gi|103488353|ref|YP_617914.1| porphobilinogen deaminase [Sphingopyxis alaskensis RB2256] gi|123379466|sp|Q1GP41|HEM3_SPHAL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|98978430|gb|ABF54581.1| porphobilinogen deaminase [Sphingopyxis alaskensis RB2256] Length = 315 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 106/274 (38%), Positives = 147/274 (53%), Gaps = 10/274 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR SPLA+A A ++L+ H + + I+P++ GDRI +R L E+GGK L+ Sbjct: 10 PLRIGTRASPLAMAQAHMAAAALIAAHGLAMAALEIVPMTATGDRIQDRALAEVGGKALW 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T E++ L +G ID AVHS KD+ T + A L R D RD + AQ + +L Sbjct: 70 TRELDAALDAGTIDVAVHSLKDVETLRDARFFLGAMLERADPRDRLVVREGIAAQKISEL 129 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSS RR A + R R D+ + RG + TRL KL +A A LLA AG++RL Sbjct: 130 PHGARLGTSSPRRAAQVRRLRPDLDTVLLRGNVATRLAKLAAGEADATLLAAAGLERLGM 189 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I + E P+ QGAI IE ++ L+ I+H T +V ERA LA L Sbjct: 190 HD-IGAVQGTELLLPAASQGAIGIECRADDAATIALLAAIDHAPTHRAVAAERALLAVLG 248 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275 G C+S +A +A + VL D +IF E Sbjct: 249 GDCRSPVAAYAEWQADG------VLRLDAEIFSE 276 >gi|312141093|ref|YP_004008429.1| hydroxymethylbilane synthase hemc [Rhodococcus equi 103S] gi|325674097|ref|ZP_08153787.1| hydroxymethylbilane synthase [Rhodococcus equi ATCC 33707] gi|311890432|emb|CBH49750.1| hydroxymethylbilane synthase HemC [Rhodococcus equi 103S] gi|325555362|gb|EGD25034.1| hydroxymethylbilane synthase [Rhodococcus equi ATCC 33707] Length = 334 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 150/290 (51%), Gaps = 16/290 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + RIGTR S LA A R +L+ P +VII TKGD +T + IG Sbjct: 18 DSRTLRIGTRGSLLATTQAGHVRDALIAAGH--PAELVII--KTKGD-VTAGPVQRIG-V 71 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F E+ + L++GE+D AVHS KD+PT L I+A RED RD ++ L +L Sbjct: 72 GVFVAELREALVAGEVDVAVHSYKDLPTAQPDDLTIAAVPTREDPRDALVARDGLVLGEL 131 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 S IGTS+ RR+A L + + RG I+TRL K+ + + AI++A AG+ R+ + Sbjct: 132 PPGSRIGTSAPRRRAQLRAMGLGLEIEPLRGNIDTRLGKVASGELDAIVIARAGLSRIGR 191 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I E L P+P QGA+ +E +NP ++ ++ T +V ERA LAEL+ Sbjct: 192 TERITETLEPVQMLPAPSQGALAVECRSDNPDLIAILGELDDHATRAAVVAERALLAELE 251 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 C + + A S L DG++F E+S G C A G D Sbjct: 252 AGCTAPVGAIAEVVES--------LDDDGRVFEELSIRG--CAAAIDGSD 291 >gi|87302648|ref|ZP_01085465.1| porphobilinogen deaminase [Synechococcus sp. WH 5701] gi|87282992|gb|EAQ74949.1| porphobilinogen deaminase [Synechococcus sp. WH 5701] Length = 317 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 105/300 (35%), Positives = 147/300 (49%), Gaps = 5/300 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ R L H P I I ++T+GD+I + L +IG Sbjct: 1 MAGTTLRIASRRSQLAMVQTHWVRDELTRAH--PDLEISIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---S 117 KGLFT+E+E +++ D AVHS KD+PT L GL + RED D + H S Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPDGLMLGCITEREDPADALVLHERHRGCS 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L SV+GTSSLRR A L D RG + TRL KL++ ++LA AG+ Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRHHFPHFQFKDVRGNVITRLEKLDSGDYDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +++ + GQGA+ IE + E +KV+ H T ERAFL Sbjct: 179 RLGLGHRIDALIDPSISLHAVGQGALGIECRHGDSAVLEQIKVLEHLPTARRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +L+G C+ I + +G L G+V + DG G + D +G AQ +R Sbjct: 239 RQLEGGCQVPIGVNSRFEGEELVLTGMVASLDGLRLIRDEARGPQQDPEAVGTSLAQLLR 298 >gi|150024157|ref|YP_001294983.1| hydroxymethylbilane synthase [Flavobacterium psychrophilum JIP02/86] gi|149770698|emb|CAL42162.1| Hydroxymethylbilane synthase [Flavobacterium psychrophilum JIP02/86] Length = 308 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 160/300 (53%), Gaps = 14/300 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M KK +IGTR S LAL A L D+ H II + ++GD I ++ L E+G Sbjct: 1 MAKKTIKIGTRDSELALWQAHHVEKMLNDL----GHKTKIIAVKSQGDIILDKPLYELGI 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ +++G+ID AVHS KD+PT L +G+ +A L R + +D+ + + +L Sbjct: 57 TGIFTKTLDIAMVNGDIDIAVHSMKDVPTALPQGIVQAAVLERANEKDILVYNN--NLDF 114 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR-- 178 L + I T SLRR+A L + V+D RG + TR+ KL +N + + A AG++R Sbjct: 115 LNTQATIATGSLRRQAQWLHKYPNHKVVDLRGNVNTRMQKLQDNNWNGAVFAAAGLERIN 174 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 +K E I N++ P+P QGA+ + N+ + + +NH +T + ER FL Sbjct: 175 IKPENYI----NLDWMIPAPAQGAMMVVAMGNDTYCLDALAELNHIETEITTYIERQFLR 230 Query: 239 ELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L+G C + I +A K T++F G++ + DG E+ + + +G A Q I Sbjct: 231 TLEGGCTAPIGAYARFNEKDETIHFQGVLFSLDGSQKIEIKKIVEIQEWKQLGYHAGQEI 290 >gi|255280051|ref|ZP_05344606.1| hydroxymethylbilane synthase [Bryantella formatexigens DSM 14469] gi|255269142|gb|EET62347.1| hydroxymethylbilane synthase [Bryantella formatexigens DSM 14469] Length = 309 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 93/294 (31%), Positives = 153/294 (52%), Gaps = 6/294 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ IG+R S LA+ + + ++ + P + I+ + T GD+I +RTL ++GGKG Sbjct: 2 KRTIIIGSRESRLAVIQSEIVKQAIE--QENPQLAVSILTMKTTGDKILDRTLDKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+++ L+ D +VHS KD+P ++ K L + A+ RED+RDV + D + Sbjct: 60 LFVKELDRALLEKRSDLSVHSLKDVPMEVPKELPLLAFSAREDVRDVLVLPEGAVEPDFS 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 G S RR + ++ RG + TRL KL+ + A++LA AG+KRL E Sbjct: 120 --KPFGCSGRRRALQIKELYPHVTCHPVRGNVLTRLRKLDEGEYGALILAAAGLKRLGLE 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + E+ P+ GQG + ++ + +K + ++ D+ CERAF+ LDG Sbjct: 178 GRISRYFSTEEMVPAAGQGILAVQGRCGEDHS--YLKAFSDDEARDAALCERAFVRALDG 235 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C S +A +A +GS + G+ D + G R DA IG + A+Y+ Sbjct: 236 GCSSPVAAYARTEGSRILLTGLYYEEDTGRWCRGCLGGARTDAERIGAELAEYL 289 >gi|332519549|ref|ZP_08396016.1| porphobilinogen deaminase [Lacinutrix algicola 5H-3-7-4] gi|332045397|gb|EGI81590.1| porphobilinogen deaminase [Lacinutrix algicola 5H-3-7-4] Length = 527 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 105/296 (35%), Positives = 159/296 (53%), Gaps = 12/296 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LAL A +S L + H V++P+ + GD + ++ L E+G G+ Sbjct: 3 KTIRIGTRDSELALYQANAVKSQLEHL----GHKTVLVPVKSTGDIVLDKPLYELGITGI 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT ++ +++G+ID AVHS KD+PT L KG+ +A L R ++RD + T + A Sbjct: 59 FTRTLDIAMLNGDIDIAVHSLKDVPTLLPKGIVQAAVLKRGNVRDTLVYKTTEEFLG-AR 117 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNKAHAILLAYAGIKR--LK 180 +VI TSSLRRKA L ++ D RG + TRL KL N ++ +A + A AGI R L+ Sbjct: 118 EAVIATSSLRRKAQWLNRYPTHTIEDIRGNVNTRLEKLKNTSRFNAAIFAAAGIGRLGLR 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E + N+E P+P QGAI + + + + ++ INHE+T ER FL +L Sbjct: 178 PETAV----NLEWMIPAPAQGAIMVTALEEDEETRAILAEINHEETQICTQIEREFLNKL 233 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +G C + I Y K + F G++L+ +G V R + +I A Y+ Sbjct: 234 EGGCTAPIGALCYIKDEEVNFEGVLLSPNGTKKITVQRVKKLGEHTDIATWCADYV 289 >gi|298674197|ref|YP_003725947.1| porphobilinogen deaminase [Methanohalobium evestigatum Z-7303] gi|298287185|gb|ADI73151.1| porphobilinogen deaminase [Methanohalobium evestigatum Z-7303] Length = 308 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 96/267 (35%), Positives = 143/267 (53%), Gaps = 7/267 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LAL L K N + + T GD T+R L E+GG G F E Sbjct: 5 IGTRGSSLALTQTRRVSQML----KEEGVNTFLKIIKTSGDSFTDRPLHELGGVGAFVRE 60 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I+++++SGE+D AVHS KD+PT+ + L SA L R+ D ++ +L +L +VI Sbjct: 61 IDERMLSGELDIAVHSMKDLPTERPEELPTSAVLKRDSPFDALLTRDGSTLDELPEGAVI 120 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+SLRRK+ +LR+R D V RG I+TRL KL + I+LA AG++R+ + + + Sbjct: 121 GTTSLRRKSQVLRYRPDFDVQSLRGNIDTRLKKLESGIYDGIILAEAGLRRMGWDIPVHQ 180 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 L+ + F PS QGAI + + +++ +V INH T ER + + G C Sbjct: 181 -LDTDHFCPSANQGAIAVVAKSGD-ESENVVSRINHPQTKIETEIERILIGNVGGGCIVP 238 Query: 248 IAGFA-YCKGSTLYFYGIVLASDGKIF 273 I +A + ++ VLA DG + Sbjct: 239 IGAYAEFVNDEKIHIRSEVLALDGSHY 265 >gi|257054363|ref|YP_003132195.1| porphobilinogen deaminase [Saccharomonospora viridis DSM 43017] gi|256584235|gb|ACU95368.1| hydroxymethylbilane synthase [Saccharomonospora viridis DSM 43017] Length = 316 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 96/295 (32%), Positives = 156/295 (52%), Gaps = 17/295 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIGTR S LA++ L + + + ++P+ST GDR ++ + EIG G+ Sbjct: 7 RTLRIGTRASNLAMSQTRTIAKMLEEAGQ----KVELVPVSTPGDR-SSAPIAEIG-VGV 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT + + L++ E+D AVHS KD+PT G+ ++A RED RDV IS +L +L Sbjct: 61 FTSALREALLANEVDVAVHSYKDLPTAPQPGIVLAAVSKREDPRDVLISRDGLTLGELPP 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GT S RR L + ++ RG I+TR+ K+ + + AI+LA AG+ R+ K Sbjct: 121 GAKVGTGSPRRMTQLRALGLGLEIVPIRGNIDTRIAKVTSGELDAIVLAKAGLTRVGKLD 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDG 242 +I E+++ P+P QGA+ +ET V++ + L++ +++HE T +V ERA LA L Sbjct: 181 LITEVIDPMQILPAPAQGALAVETRVDDVDTEHLLRSIVDHEATRVAVAAERAVLATLQA 240 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C + + A L S+G + +S G A D+ Q +R Sbjct: 241 GCSAPVGALAEVVED--------LDSEGAVVERLSLRGVAATATE--GDSVQILR 285 >gi|326402301|ref|YP_004282382.1| porphobilinogen deaminase [Acidiphilium multivorum AIU301] gi|325049162|dbj|BAJ79500.1| porphobilinogen deaminase [Acidiphilium multivorum AIU301] Length = 335 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 108/312 (34%), Positives = 156/312 (50%), Gaps = 11/312 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHK---IPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 P R+GTR SPLAL ++L ++ P +ST GDR+T+R L EIGGK Sbjct: 22 PLRVGTRGSPLALRQTDMFLAALREICPALGFAPDAFAPEIISTTGDRVTDRPLAEIGGK 81 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-------SHT 114 GLF +EI + L+ G ID AVHS KD+ T L G+ ++ + RED RD I + Sbjct: 82 GLFAKEIHEALLDGRIDFAVHSLKDLETALPDGIILACTMKREDARDALILADGLGPVND 141 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 L + +GTSS+RR+A LL R D+ + RG + TRL+ A LLA A Sbjct: 142 GDIWSSLPKGARVGTSSVRRQAQLLHARPDLQIGLLRGNVRTRLDAARIGTFDATLLALA 201 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G++RL E+ + ++ E P+ QG + I + + EL+ I + + ER Sbjct: 202 GLRRLGFEEEVAAAIDPEAMVPAACQGIVGITVRAADSRLAELLAAIENHEAKAVSKAER 261 Query: 235 AFLAELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 A LA LDGSC++ I G A L+ G+ DG + S N DA +G + Sbjct: 262 ALLAALDGSCRTPIGGHARLLPDGNLHLTGLTARPDGSFLLKRSEVANAADAARLGAELG 321 Query: 294 QYIRFISNKNVF 305 +R S ++F Sbjct: 322 ASLRRDSPADIF 333 >gi|29827579|ref|NP_822213.1| porphobilinogen deaminase [Streptomyces avermitilis MA-4680] gi|39931490|sp|Q82P95|HEM32_STRAW RecName: Full=Porphobilinogen deaminase 2; Short=PBG 2; AltName: Full=Hydroxymethylbilane synthase 2; Short=HMBS 2; AltName: Full=Pre-uroporphyrinogen synthase 2 gi|29604679|dbj|BAC68748.1| putative porphobilinogen deaminase [Streptomyces avermitilis MA-4680] Length = 314 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 98/291 (33%), Positives = 142/291 (48%), Gaps = 6/291 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L +H P ++ + T GD+ L+++ GKG FT Sbjct: 10 IRIVSRDSPMALAQVARVRAELAALH--PRTRTEVVAVKTTGDKWMG-DLSKVDGKGAFT 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +A+L R+DIRD + +L +L Sbjct: 67 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTMFAAFLKRDDIRDALVHPGGLTLDELPP 126 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSS+RR A L + + FRG RL KL +A A+LLA +G++R+ +E Sbjct: 127 GTRIGTSSVRRVAQLAAAYPHLECVPFRGNANRRLEKLAAGEADALLLAVSGLERIGRED 186 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI E+L E P G G + ++ + E + + T ER FL L G Sbjct: 187 VITEVLEPETMMPPIGAGILALQCREGDTGLIETISELGDPGTHREATAERMFLHVLQGH 246 Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 C S IAG+A + L V DGK R D +G A Sbjct: 247 CNSPIAGYARTERNGELSLRASVFTLDGKTVLNAHEWAGRLDPATLGTSVA 297 >gi|255534181|ref|YP_003094552.1| Porphobilinogen deaminase [Flavobacteriaceae bacterium 3519-10] gi|255340377|gb|ACU06490.1| Porphobilinogen deaminase [Flavobacteriaceae bacterium 3519-10] Length = 311 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 95/273 (34%), Positives = 150/273 (54%), Gaps = 17/273 (6%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +IGTR SPLAL A E L + + H I P+ +KGD+ ++ L +G G+ Sbjct: 10 RSIKIGTRNSPLALWQAREVARHLQNNN----HTTDITPIISKGDKNLSQPLYTLGITGI 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT++++ L++ E+D AVHS KD+PT+L + ++I A L R+ +DV + + L L Sbjct: 66 FTKDLDIALLNNEVDIAVHSLKDIPTQLPENVEIIAVLQRDYPQDVLVRK--KDAATLEL 123 Query: 124 HSV-IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 H + I TSSLRR+A L+ D RG ++TRL KL N A + + A I+R+ Sbjct: 124 HQLKIATSSLRRRAFWLKEFPGTEFSDIRGNVQTRLTKLEENDFDATMFSLAAIERMGLS 183 Query: 183 KVIKEILNIEDFP---PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 ++ E P P+P QG + + N+P+ +EL K INH +T ++ ER+FL+ Sbjct: 184 ------VDYEHLPLMIPAPAQGVVAVCARSNDPEIKELFKEINHRETRICIDIERSFLST 237 Query: 240 LDGSCKSAIAGFAYCKG-STLYFYGIVLASDGK 271 L+G C + I FA + F G + + DG+ Sbjct: 238 LEGGCTAPIGAFAEINDLGEVRFTGRICSLDGQ 270 >gi|125975012|ref|YP_001038922.1| hydroxymethylbilane synthase [Clostridium thermocellum ATCC 27405] gi|256005102|ref|ZP_05430072.1| porphobilinogen deaminase [Clostridium thermocellum DSM 2360] gi|281418570|ref|ZP_06249589.1| porphobilinogen deaminase [Clostridium thermocellum JW20] gi|167008812|sp|A3DIF0|HEM3_CLOTH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|125715237|gb|ABN53729.1| hydroxymethylbilane synthase [Clostridium thermocellum ATCC 27405] gi|255990953|gb|EEU01065.1| porphobilinogen deaminase [Clostridium thermocellum DSM 2360] gi|281407654|gb|EFB37913.1| porphobilinogen deaminase [Clostridium thermocellum JW20] gi|316939173|gb|ADU73207.1| porphobilinogen deaminase [Clostridium thermocellum DSM 1313] Length = 292 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 91/277 (32%), Positives = 154/277 (55%), Gaps = 7/277 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+G+R S LA+ A S+ + P I ++ + T GD+I ++T+ +IGGKGLF Sbjct: 3 IRVGSRESKLAVRQAQIVIDSIKKYN--PDIEIELVTMKTTGDKILDKTIDKIGGKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+++ L+ G++D VHS KDMP + L I A RED RDV + ++ ++ + Sbjct: 61 KELDRALLDGKVDITVHSFKDMPMDIDDRLPIVAVSKREDPRDVLVLPKGKN--EIDFNG 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IG SS RRK + + +V RG + TRL KL+ + AI LAYAG+KRL E+ I Sbjct: 119 PIGCSSSRRKIQIEKIYPGCTVEPIRGNVLTRLEKLDKGEYSAIALAYAGLKRLGLEERI 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ QG I ++ + + ++ + +D+WD ER+F+ L+G C Sbjct: 179 WRVFSTDEIVPAACQGIIAVQARKDFDAS--ILANFHDKDSWDVSVAERSFIKALNGGCS 236 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 S A + +G + G + +GKI+ ++++ G+R Sbjct: 237 SPSAAYGVIQGEKIVLTGFYVDKNGKIY-KMTKTGDR 272 >gi|307266129|ref|ZP_07547673.1| porphobilinogen deaminase [Thermoanaerobacter wiegelii Rt8.B1] gi|306918819|gb|EFN49049.1| porphobilinogen deaminase [Thermoanaerobacter wiegelii Rt8.B1] Length = 299 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 90/252 (35%), Positives = 137/252 (54%), Gaps = 5/252 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK ++G+R S LAL T+ + ++ K I+ ++T+GD + ++ ++EIGGK Sbjct: 2 KKVIKVGSRSSELALVQ---TQMVINEIKKFRQDFEFEIVKITTQGDALIDKPISEIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F +EIE L+ GEID AVHS KDMP ++ + L++ A L RED +DVF+S DL Sbjct: 59 GVFVKEIESALLKGEIDMAVHSMKDMPYEIPEKLKLMAVLKREDPKDVFVSRNGTKFIDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSSLRR+ L R DI ++ RG + TRL K+ I+L+ AG+ RL Sbjct: 119 KKGAKIGTSSLRRQVQLKALRPDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E +I E + P+P QG + +E + + QE I T+ + ER L Sbjct: 179 ESIITEYFPPDVVVPAPCQGILAVEIAESFDNIFQEFYPYIVDRRTFFEASVERELLKVF 238 Query: 241 DGSCKSAIAGFA 252 +C+ +A Sbjct: 239 GVNCRQPFGAYA 250 >gi|289577611|ref|YP_003476238.1| porphobilinogen deaminase [Thermoanaerobacter italicus Ab9] gi|289527324|gb|ADD01676.1| porphobilinogen deaminase [Thermoanaerobacter italicus Ab9] Length = 299 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 93/252 (36%), Positives = 137/252 (54%), Gaps = 5/252 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK ++G+R S LAL T+ + ++ K I+ ++T+GD + ++ ++EIGGK Sbjct: 2 KKVIKVGSRSSELALVQ---TQMVINEIKKFRQDFEFEIVKITTQGDALIDKPISEIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F +EIE L+ GEID AVHS KDMP + +GL++ L RED RDVFIS +L Sbjct: 59 GVFVKEIESALLKGEIDMAVHSLKDMPYETPEGLKLIPVLKREDPRDVFISKDGTQFMNL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSSLRR+ L RSD+ I RG I+TRL K+ I+L+ AG+ RL Sbjct: 119 KEGAKIGTSSLRRQVQLKDLRSDMQTIPIRGNIKTRLRKIEELNLDGIVLSAAGLHRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E +I E + P+P QG + +E + + QE I T+ + ER L Sbjct: 179 ESIITEYFPPDVVVPAPCQGILAVEIAESFDNIFQEFYSYIVDRRTFFEASIERELLKVF 238 Query: 241 DGSCKSAIAGFA 252 +C+ +A Sbjct: 239 GVNCRQPFGAYA 250 >gi|224083036|ref|XP_002187797.1| PREDICTED: hydroxymethylbilane synthase [Taeniopygia guttata] Length = 371 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 100/274 (36%), Positives = 145/274 (52%), Gaps = 6/274 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 ++ + R+GTR S LA + L +++ P + I+ +ST GD+I + L++IG Sbjct: 26 VDGRAIRVGTRRSQLARIQTDSVVTMLRELY--PDLHFEIVAMSTTGDKILDTALSKIGE 83 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K LFT+E+E L E+D VHS KD+PT L I A RE+ D + H K Sbjct: 84 KSLFTKELENALERNEVDLVVHSLKDLPTSLPPDFTIGAVCKRENPLDAVVFHPKNCGKT 143 Query: 121 LAL---HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGI 176 L+L SVIGTSSLRR A L + + D RG + TRL KL+ + AI+LA AG+ Sbjct: 144 LSLLPEKSVIGTSSLRRAAQLKKKFPHLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGL 203 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 KR+ E I ++L+ ED + GQGA+ +E + + +V ++ DT ERAF Sbjct: 204 KRMGWENRIGQLLSPEDCLYAVGQGALAVEVRAKDQEILNMVSALHDADTVLCCIAERAF 263 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 + L+G C +A K LY G V + DG Sbjct: 264 MKRLEGGCSVPVAVNTLLKDGQLYLTGAVYSLDG 297 >gi|225548234|ref|ZP_03769519.1| hypothetical protein RUMHYD_00213 [Blautia hydrogenotrophica DSM 10507] gi|225040673|gb|EEG50919.1| hypothetical protein RUMHYD_00213 [Blautia hydrogenotrophica DSM 10507] Length = 291 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 98/292 (33%), Positives = 150/292 (51%), Gaps = 8/292 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LA+ + ++ L + + II + T GD I +RTL +IGGKGLF Sbjct: 4 IRIGSRESKLAVIQSELVQNYL----RAQGLDAQIITMKTTGDIILDRTLDQIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+++ L+ G D +VHS KD+P ++ + L + AY RED RDV I Q K+L L Sbjct: 60 KELDRALLDGRSDLSVHSLKDLPMEVAQDLPVVAYSKREDPRDVLI--LPQGEKELDLSK 117 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IG+SSLRR L + + RG + TRL KL++ + A++LA AG+KRL + I Sbjct: 118 PIGSSSLRRCIQLKKLFPEAECKSVRGNVLTRLEKLDSGQYSALVLAAAGVKRLGLQGRI 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +E+ P+ GQG + ++ + + N ERAF+ LDG C Sbjct: 178 SRYFTVEEMLPAAGQGILAVQGKAGQDYS--YLGAYNDRQAQAEALAERAFVRWLDGGCS 235 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 S +A A C+G L G+ +H+ G A +G + A+ ++ Sbjct: 236 SPVAAHAVCQGERLQMTGLYYHDLTGQWHKEQIAGETSQAKMLGVELAKRMK 287 >gi|313205044|ref|YP_004043701.1| porphobilinogen deaminase [Paludibacter propionicigenes WB4] gi|312444360|gb|ADQ80716.1| porphobilinogen deaminase [Paludibacter propionicigenes WB4] Length = 306 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 100/297 (33%), Positives = 159/297 (53%), Gaps = 10/297 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K F + TR S LA +T L+ V K P I+ +ST GD +T++ LT GG G+ Sbjct: 3 KKFVVATRPSLLAYTQTQQT-VDLLRV-KNPDCEFEIVKISTHGDTVTDKPLTAFGGTGV 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L G+ A+HS KD+P+ +GL ++A+ R+D RD+ ++ S+ DL Sbjct: 61 FVKELENALYEGKAHFAIHSLKDVPSIQPEGLVLAAFPTRQDPRDLLLTRGGVSVADLPS 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 VIGT S RR + + + I+ D RG I+TRL KL + + AI+LA AG+KRL KE Sbjct: 121 PCVIGTGSPRRMVQVAKLKEQITFADLRGNIDTRLKKLEDGQYDAIVLAAAGLKRLGKEI 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + + P+ GQGAI IE ++ + ++K IN T ++ ER+++ + G Sbjct: 181 AESAYMPTDVCLPAIGQGAIAIECRADDAETIAMLKSINDAATETAIVAERSYMKTIGGG 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLAS--DGKI--FHEVSRNGNRCDAINIGRDAAQYI 296 CK + +A + + + ++L + G+I HE S DA +G+ + I Sbjct: 241 CKFPLGAYATVESDEVNLH-VMLGNHHTGQIIRMHETS---TVADAEKLGQKLGEAI 293 >gi|283954165|ref|ZP_06371690.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 414] gi|283794444|gb|EFC33188.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 414] Length = 307 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 95/265 (35%), Positives = 145/265 (54%), Gaps = 6/265 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL + L H+I +++ TKGD + + L +IGGKGLFT+E Sbjct: 5 IATRKSQLALWQSEYIAQILKKTHQI---EVLLEGFKTKGDVLLDSPLAKIGGKGLFTKE 61 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L + + Sbjct: 62 LEESILRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSKNYKDFLSLPKGARV 121 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+SLRRK LL R D+ +I RG + +R+ KL N + AI+LA AGIKRL +K + Sbjct: 122 GTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNGEFDAIILAMAGIKRLSLDKQVNF 181 Query: 188 ILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ P+ QGA+ IE+ +N+ K EL+K +N E+ + ER F+A L+G C+ Sbjct: 182 VYEFSKDELIPAASQGALGIES-INDEKILELLKCLNDENALIETSIEREFIATLEGGCQ 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270 I A G + ++ DG Sbjct: 241 VPIGINAELLGDEICVRAVLGLPDG 265 >gi|114329088|ref|YP_746245.1| porphobilinogen deaminase [Granulibacter bethesdensis CGDNIH1] gi|114317262|gb|ABI63322.1| porphobilinogen deaminase [Granulibacter bethesdensis CGDNIH1] Length = 344 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 112/320 (35%), Positives = 159/320 (49%), Gaps = 20/320 (6%) Query: 1 MEKKPFRIGTRCSPLALAH--AFETR-----SSLMDVHKIPPHNIVIIPLSTKGDRITNR 53 M P R+GTR SPLAL AF R L D+ H I +T GDR+ +R Sbjct: 28 MHGLPLRVGTRASPLALVQTRAFLARLRSFCPILRDMEVFEEHQI-----NTTGDRVQDR 82 Query: 54 TLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-- 111 L EIGGKGLF +EI + L ID AVHS KD+ T+L G+ ++ L RED RD I Sbjct: 83 RLAEIGGKGLFAKEIHEALADRRIDFAVHSLKDLETQLPPGIVLACTLKREDARDAIILP 142 Query: 112 -----SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA 166 L +++GTSS+RR+A L R D+ RG ++TRL KL + Sbjct: 143 PGFTPPPPGDPFSVLQQGALVGTSSVRRQAQLAHARPDLRFATIRGNVQTRLAKLARGEC 202 Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226 A LLA AG++RL E+ +L+ E P+ QG + + ++ ++L+ I + Sbjct: 203 DASLLALAGLRRLDMEQAASVVLDTEIMVPAACQGIVGVTVREDDYALRDLLAGIEDREA 262 Query: 227 WDSVNCERAFLAELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA 285 ERA L LDGSC++ I G A G L+ G+V A DG + G +A Sbjct: 263 KAVSTAERALLNLLDGSCRTPIGGHARILSGGVLHLTGLVAAEDGSFLLRRTLQGAVSEA 322 Query: 286 INIGRDAAQYIRFISNKNVF 305 +G + + +R S ++F Sbjct: 323 EALGAELGRSLRADSPPDIF 342 >gi|311896763|dbj|BAJ29171.1| putative porphobilinogen deaminase [Kitasatospora setae KM-6054] Length = 318 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 95/285 (33%), Positives = 151/285 (52%), Gaps = 15/285 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + + V I + ++ ++T GD ++ +L IGG G+F Sbjct: 3 PLRLGTRRSALAMAQSGMVAEA---VAGITGRRVELVEITTYGD-VSRESLARIGGTGVF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L+ G ID AVHS KD+PT GL ++A RED RD ++ +L +L Sbjct: 59 VSALRDALLEGRIDLAVHSLKDLPTAAPAGLLLAAVPEREDARDALVARDGLTLAELVGK 118 Query: 125 SV-----IGTSSLRRKALLLRWR----SDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 S +GT S RR A L W +++ + RG ++TR+ + + + A++LA AG Sbjct: 119 STGRAVRVGTGSPRRMAQLNAWARARGAELETVAIRGNVDTRIGFVASGELDAVVLATAG 178 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + RL + I E L+ E P+PGQGA+ +E +P ++ ++H T +V ERA Sbjct: 179 LNRLGRAAEITEHLDTELMLPAPGQGALAVE--CVDPTLAAVLARLDHRPTRAAVVAERA 236 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 LA L+ C + +A A G+ L G+V ++DG ++S NG Sbjct: 237 LLATLEAGCSAPVAALATWAGTELRLDGVVGSTDGTELIKMSANG 281 >gi|145220672|ref|YP_001131350.1| porphobilinogen deaminase [Mycobacterium gilvum PYR-GCK] gi|315442377|ref|YP_004075256.1| hydroxymethylbilane synthase [Mycobacterium sp. Spyr1] gi|189028094|sp|A4T340|HEM3_MYCGI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|145213158|gb|ABP42562.1| hydroxymethylbilane synthase [Mycobacterium gilvum PYR-GCK] gi|315260680|gb|ADT97421.1| hydroxymethylbilane synthase [Mycobacterium sp. Spyr1] Length = 312 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 92/275 (33%), Positives = 144/275 (52%), Gaps = 13/275 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H+ ++ +ST+GDR + + +IG G+FT Sbjct: 2 IRIGTRGSLLATTQAGTIRDALIAAG----HDAELVIISTEGDRRADEPIADIG-VGVFT 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + +D AVHS KD+PT + I+A RED RD ++ L +L S Sbjct: 57 AALREAIADNVVDAAVHSYKDLPTAVDPRFMIAATPVREDARDALVARDGMVLGELPAGS 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS RR A L + + RG ++TRLN++++ + AI++A AG+ R+ + +V+ Sbjct: 117 VIGTSSPRRVAQLKALGLGLEIRPLRGNLDTRLNRVSSGELDAIVVAKAGLSRIGRLEVV 176 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ IE + +L+ ++ DT +V ER LAEL+ C Sbjct: 177 TETLEPVQMLPAPAQGALAIECRAGDTALAQLLAELDDADTRAAVTAERTLLAELEAGCS 236 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 + + A S + DG++F E+S G Sbjct: 237 APVGAIAEVVES--------IDEDGRVFEELSLRG 263 >gi|291525403|emb|CBK90990.1| porphobilinogen deaminase [Eubacterium rectale DSM 17629] Length = 338 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 99/277 (35%), Positives = 139/277 (50%), Gaps = 32/277 (11%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 + IGTR S LAL L + P + + + T GD + L +IG KG+F Sbjct: 3 YLIGTRGSKLALVQTDYVIDKLKRAY--PDDDFKAVIIKTTGDLEQKKALDKIGSKGIFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE +L+SG+I AVHS KDMP + GL + RED RDV + A SL +L + Sbjct: 61 KEIEDELLSGKIHMAVHSMKDMPDEPAAGLTFAKAWKREDPRDVLVLKNAASLDELPHGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL---------------NNN------ 164 VIGT S RRK LL+ R D+ V+ RG I+TRL KL NNN Sbjct: 121 VIGTGSKRRKYQLLKLRPDLKVVGIRGNIDTRLRKLYDGEIIYEEVADNTVNNNEIANEK 180 Query: 165 -------KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217 + I+LA AGIKR+ ++ I + + +D P+P QG + +E +N K Sbjct: 181 QNKYNEYRLDGIVLAAAGIKRIGRDSEITQYFSEDDMIPAPAQGTLALELRADNAKLMAK 240 Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254 + ++ E T ER FL ++ G+C +A AYC Sbjct: 241 LDALSDEKTNLCAGIEREFLKQIGGNCHLPVA--AYC 275 >gi|238923292|ref|YP_002936807.1| porphobilinogen deaminase [Eubacterium rectale ATCC 33656] gi|238874966|gb|ACR74673.1| porphobilinogen deaminase [Eubacterium rectale ATCC 33656] Length = 338 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 99/277 (35%), Positives = 139/277 (50%), Gaps = 32/277 (11%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 + IGTR S LAL L + P + + + T GD + L +IG KG+F Sbjct: 3 YLIGTRGSKLALVQTDYVIDKLKRAY--PDDDFKAVIIKTTGDLEQKKALDKIGSKGIFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE +L+SG+I AVHS KDMP + GL + RED RDV + A SL +L + Sbjct: 61 KEIEDELLSGKIHMAVHSMKDMPDEPAAGLTFAKAWKREDPRDVLVLKNAASLDELPHGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL---------------NNN------ 164 VIGT S RRK LL+ R D+ V+ RG I+TRL KL NNN Sbjct: 121 VIGTGSKRRKYQLLKLRPDLKVVGIRGNIDTRLRKLYDGEIIYEEVADNTVNNNEIANEK 180 Query: 165 -------KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217 + I+LA AGIKR+ ++ I + + +D P+P QG + +E +N K Sbjct: 181 KNKYSEYRLDGIVLAAAGIKRIGRDSEITQYFSEDDMIPAPAQGTLALELRADNAKLMAK 240 Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254 + ++ E T ER FL ++ G+C +A AYC Sbjct: 241 LDALSDEKTNLCAGIEREFLKQIGGNCHLPVA--AYC 275 >gi|225010397|ref|ZP_03700869.1| porphobilinogen deaminase [Flavobacteria bacterium MS024-3C] gi|225005876|gb|EEG43826.1| porphobilinogen deaminase [Flavobacteria bacterium MS024-3C] Length = 303 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 103/293 (35%), Positives = 149/293 (50%), Gaps = 9/293 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LA+ A +T S + H I ++P+ + GD ++ L E+G G+ Sbjct: 3 KTLRIGTRDSALAMWQA-KTVQSQLAAHGIASE---LVPVKSLGDLKLDQPLYELGVTGV 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ ++ L++GEID AVHS KD+PT L KGL +A L R DV + H + L Sbjct: 59 FTKTLDLALLAGEIDLAVHSYKDVPTVLAKGLSTAAVLKRASTADVLV-HKSPDFTTSGL 117 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 I TSSLRRKA L + ++D RG ++TRL KL NN + A AG+ RL + Sbjct: 118 Q--IATSSLRRKAQWLAKYPEHQLVDIRGNVQTRLEKLANNSWGGAIFAAAGLARL--DL 173 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + + + ++ P+P QGA+ + + E + V+N T ER FL EL+G Sbjct: 174 LPENAMRLDWMVPAPAQGAMVVVAQSAHTVLLEELSVLNDSQTALCTQIEREFLNELEGG 233 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C + I L+F G++ + DGK E + A GR AQ I Sbjct: 234 CTAPIGALCTTTQDQLHFIGVLHSLDGKQHIETNTFVPLDQAPGYGRKMAQKI 286 >gi|149278622|ref|ZP_01884758.1| porphobilinogen deaminase [Pedobacter sp. BAL39] gi|149230617|gb|EDM36000.1| porphobilinogen deaminase [Pedobacter sp. BAL39] Length = 526 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 95/255 (37%), Positives = 143/255 (56%), Gaps = 14/255 (5%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LAL A + L ++ I+ T+GD+I N L ++ GKG FT+E Sbjct: 6 IGTRGSDLALWQANFIKDRLAEIGAEAELKII----KTQGDKILNLRLDKLEGKGFFTKE 61 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-----SHTAQSLKDLA 122 +E++L+ G ID AVHS KD+PT GL I+A RED ++ + Q L L Sbjct: 62 LEEELLGGTIDIAVHSHKDLPTTHPAGLTIAAVTEREDPSELLLILKDCVDIKQKLS-LK 120 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSS RRKA LL RSD+++ D RG + TR+ KL + AI+LA AG+ RL + Sbjct: 121 TGAMVGTSSNRRKAQLLALRSDLNIEDLRGNVPTRIQKLRDENYDAIVLAKAGVNRLNID 180 Query: 183 --KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + E+++ + P+P QGA+ ++ N+ + L++ +NH+DT D + ER L Sbjct: 181 LSEFHVEVIDPTEIVPAPAQGALAVQIRENDTELFALLQQLNHQDTIDEIAVERKVLNLF 240 Query: 241 DGSCKSAIAGFAYCK 255 +G C + YCK Sbjct: 241 EGGCHMPLG--CYCK 253 >gi|319946908|ref|ZP_08021142.1| hydroxymethylbilane synthase [Streptococcus australis ATCC 700641] gi|319746956|gb|EFV99215.1| hydroxymethylbilane synthase [Streptococcus australis ATCC 700641] Length = 307 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 87/254 (34%), Positives = 142/254 (55%), Gaps = 7/254 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + ++GTR S LA+ L + H P ++P T+GDR+ + +L IGGKG+ Sbjct: 2 RSIKVGTRKSQLAMTQTKMMVDRLKECH--PDVEFELVPYKTQGDRLVHVSLQTIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLA 122 F +EIE+ L++ +ID A+HS KD+P+ L+ G I A RED+RD I +L L Sbjct: 60 FVKEIEQALLNRDIDIAIHSLKDVPSILVDGCTIGAIPEREDVRDCLIYREEGMTLATLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--- 179 +V+GTSS+RR+ L R+D+ RG I++R+ KL + AI+LA AG+KR+ Sbjct: 120 QGAVVGTSSIRRQVQLQSLRNDLQFKPLRGNIDSRIRKLQEGECDAIVLAAAGLKRIGYL 179 Query: 180 -KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + E LN +F P+ QGA+ IE ++ + E++ I+ ++ + + ER FL+ Sbjct: 180 DQSPSLNIEFLNPHEFIPAVSQGALAIECREDDEEVLEILASIHDKEVENCIQLERCFLS 239 Query: 239 ELDGSCKSAIAGFA 252 ++ C + A Sbjct: 240 LMNADCTFPVGAHA 253 >gi|296327549|ref|ZP_06870095.1| hydroxymethylbilane synthase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296155375|gb|EFG96146.1| hydroxymethylbilane synthase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 298 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 107/276 (38%), Positives = 142/276 (51%), Gaps = 6/276 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60 KK IG+R S LALA A + L + P + I + T GD+ +N ++I Sbjct: 2 KKNIIIGSRGSILALAQANLVKDRLQGNY--PNLSFEIKEIVTSGDKDLKSNWENSDISL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE+KL+ GEID AVHS KDMP KGL A RED RDV +S L Sbjct: 60 KSFFTKEIEQKLLDGEIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 LPQGAKVGTSSLRRAMNLKAVRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRTG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E LN E FPP+P QG + I+ N+ + ++ +K I++E V ER F Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKKFLKSIHNETVAKIVEIEREFSKIF 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV 276 DG C + + ++ G + F V + +GK V Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTA-VYSDEGKQIRAV 273 >gi|328786215|ref|XP_624261.3| PREDICTED: porphobilinogen deaminase-like [Apis mellifera] Length = 357 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 108/273 (39%), Positives = 151/273 (55%), Gaps = 7/273 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+G+R S LAL L + H P II +STKGD+I +++L +IG K LFT Sbjct: 10 IRVGSRKSELALKQTKYVIECLKEYH--PTKEFQIITMSTKGDKILDKSLPKIGEKSLFT 67 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122 EE+E L SG +D VHS KD+PT L +G+ + A L RED RD + + ++L L Sbjct: 68 EELELALESGRVDFVVHSLKDLPTSLPEGMALGAILKREDPRDAVVMSKKYKNKTLSTLP 127 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLK 180 SVIGTSSLRR A L R + V + RG + TRL KL+ N AI+LA AG+KR+ Sbjct: 128 EGSVIGTSSLRRSAQLARNMPHLKVENIRGNLNTRLRKLDDENGPFAAIILAAAGLKRMN 187 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++L E+ + GQGA+ +E + K L++ + +T CER+FL L Sbjct: 188 WENRISQLLEPEEALYAVGQGALGVECRETDWKILSLLEPLYDVETTLRCVCERSFLKTL 247 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 G C + +A + K L G V + DG+ F Sbjct: 248 GGGCSAPVAVSSTLKNKILTVTGAVWSLDGQKF 280 >gi|322695309|gb|EFY87119.1| porphobilinogen deaminase [Metarhizium acridum CQMa 102] Length = 327 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 103/281 (36%), Positives = 147/281 (52%), Gaps = 12/281 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +GTR SPLA+A A +SL V P + I ++T GDR N L GG Sbjct: 1 MAPSTITVGTRKSPLAMAQAELVVASLQSV--FPSSSFPIHGMTTTGDRDQNTALYNFGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----- 115 KGL+T ++E+KL++ E+D VHS KDMPT L + A RED RDV + A Sbjct: 59 KGLWTTQLEEKLVARELDIVVHSLKDMPTTLPSDCTLGAVTKREDPRDVLVLKKALRDAN 118 Query: 116 --QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLA 172 ++L DL SVIGTSS+RR A L R + D RG I+TRL KL+ + + AI+LA Sbjct: 119 GYKTLADLPDGSVIGTSSIRRIAQLARRYPALRFKDVRGNIQTRLKKLDEDPELSAIVLA 178 Query: 173 YAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 AG+ R+ + I + L++++ + GQGA+ +E + + +K I H DT + Sbjct: 179 AAGLLRMDLGEHISQYLDVDNGGILHAVGQGALGVECRAGDEQVLRALKEIEHRDTLLAC 238 Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 ER+ + EL+G C I L V++ GK Sbjct: 239 LAERSLMRELEGGCSVPIGVETKWADGKLRLRATVVSVTGK 279 >gi|147920614|ref|YP_685587.1| porphobilinogen deaminase [uncultured methanogenic archaeon RC-I] gi|121683115|sp|Q0W5T2|HEM3_UNCMA RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|110620983|emb|CAJ36261.1| porphobilinogen deaminase [uncultured methanogenic archaeon RC-I] Length = 303 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 103/266 (38%), Positives = 138/266 (51%), Gaps = 6/266 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LALA A + R L K I + T GD + L + G G F Sbjct: 1 MRIGTRGSKLALAQAEKVRRLL----KEQGVEATITVIKTSGDVQKDSPLYMMKGYGAFV 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EI+ L+ E+D AVHS KD+PT + L +A L RE DV + A+ L DL + Sbjct: 57 REIDDLLLKNEVDLAVHSLKDIPTVRPENLVTAAVLKRESALDVAVIRNAERLADLPEGA 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSS RR A++ R + D RG ++TRL KL + + AILLA AG+ RL + + Sbjct: 117 VVGTSSTRRAAMIYRHYPGLVTKDIRGNVDTRLRKLRDGEYDAILLAEAGLIRLGLDLKV 176 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ +F P+ QG I I P+A E+VK +N E TW ER A LDG C Sbjct: 177 -ERLDPYNFVPAANQGVIAIVARQGTPEA-EVVKELNDETTWIETRVERIIAAGLDGGCV 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK 271 + +A G + G VL+ DG+ Sbjct: 235 VPMGVYATRVGDEIDVIGEVLSLDGR 260 >gi|109108912|ref|XP_001101850.1| PREDICTED: porphobilinogen deaminase isoform 7 [Macaca mulatta] Length = 361 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 100/269 (37%), Positives = 143/269 (53%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L ++ P II +ST GD+I + L++IG K LFT Sbjct: 21 IRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 79 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 138 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181 SV+GTSSLRR A L R S + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 139 EKSVVGTSSLRRAAQLQRKFSHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 198 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 199 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 258 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 259 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 287 >gi|109108922|ref|XP_001101575.1| PREDICTED: porphobilinogen deaminase isoform 4 [Macaca mulatta] gi|109108924|ref|XP_001101668.1| PREDICTED: porphobilinogen deaminase isoform 5 [Macaca mulatta] Length = 344 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 100/269 (37%), Positives = 143/269 (53%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L ++ P II +ST GD+I + L++IG K LFT Sbjct: 4 IRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 62 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181 SV+GTSSLRR A L R S + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 122 EKSVVGTSSLRRAAQLQRKFSHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 182 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 242 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 270 >gi|298207313|ref|YP_003715492.1| porphobilinogen deaminase [Croceibacter atlanticus HTCC2559] gi|83849949|gb|EAP87817.1| porphobilinogen deaminase [Croceibacter atlanticus HTCC2559] Length = 305 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 95/291 (32%), Positives = 153/291 (52%), Gaps = 11/291 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LAL A ++ L ++ + V++P+ + GD I ++ L E+G G+ Sbjct: 3 KVIRIGTRDSELALWQANTVKAQLENLG----YKTVLVPVKSTGDLILDQPLYELGITGI 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ ++ +++G++D AVHS KD+PT L KG+ A L R +D+ + + L L Sbjct: 59 FTKTLDVAMVNGDVDIAVHSMKDVPTALPKGIMQGAVLKRAATKDILVH---KGLDFLEA 115 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 I T SLRRKA L + V+D RG + TRL KL +N + + A AG+ R+ Sbjct: 116 EGTIATGSLRRKAQWLNKYPNHKVVDLRGNVNTRLQKLEDNSWNGAIFAKAGLTRI---N 172 Query: 184 VIKE-ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E + ++ P+P QGA+ I + +E V +N + ER FL L+G Sbjct: 173 VLPEHFIELDWMLPAPAQGAMVIAVMEQDVFCKEAVSKLNDHFSEICTTIEREFLKTLEG 232 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 C + I A + ++F G + + DGK E+ + + + N+GR+ A Sbjct: 233 GCTAPIGALAVIEDKDIWFRGCLFSLDGKQKLEIEKRVSLKENRNLGRNCA 283 >gi|91084135|ref|XP_967479.1| PREDICTED: similar to porphobilinogen deaminase [Tribolium castaneum] gi|270006650|gb|EFA03098.1| hypothetical protein TcasGA2_TC013007 [Tribolium castaneum] Length = 460 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 118/318 (37%), Positives = 164/318 (51%), Gaps = 20/318 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E + R+G+R S LAL S L +H P + I+ +ST GD++ + L +IG K Sbjct: 3 EIEKIRVGSRKSELALIQTRHVISLLKKIH--PGKDFEIVTMSTLGDKVLDIPLPKIGEK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118 LFT+E+E L +G +D VHS KD+PT L G+ I A L RED RD + H L Sbjct: 61 SLFTKELEAALSTGCVDFVVHSLKDLPTVLPPGMAIGAVLTREDPRDALVLQKDHDKYLL 120 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177 + L SVIGTSSLRR A L R + V RG + TRL KL+ K AI+LA AG+ Sbjct: 121 ETLPEGSVIGTSSLRRGAQLARKYPHLKVESIRGNLNTRLKKLDELGKYQAIILASAGLI 180 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ I +IL+ ++ + GQGA+ +E ++ K EL+K + T V ER+FL Sbjct: 181 RMGWTSRISKILDSDELLYAVGQGALAVECRESDEKTIELLKPLYDVQTALRVISERSFL 240 Query: 238 AELDGSCKSAIA---GFAYCKGS--TLYFYGIVLASDGK--IFH----EVS-RNGNRCDA 285 L G C + +A + K + TL G V + DGK I E+ +N RC A Sbjct: 241 KTLGGGCSAPVAVSSDLSRLKDNKHTLKLKGAVWSLDGKEEIIETGECEIDIKNTQRCTA 300 Query: 286 --INIGRDAAQYIRFISN 301 N + +R I N Sbjct: 301 CPFNTSNQSTSCVRDIEN 318 >gi|21221749|ref|NP_627528.1| porphobilinogen deaminase [Streptomyces coelicolor A3(2)] gi|289770973|ref|ZP_06530351.1| porphobilinogen deaminase [Streptomyces lividans TK24] gi|11386858|sp|Q9WX16|HEM31_STRCO RecName: Full=Porphobilinogen deaminase 1; Short=PBG 1; AltName: Full=Hydroxymethylbilane synthase 1; Short=HMBS 1; AltName: Full=Pre-uroporphyrinogen synthase 1 gi|5123663|emb|CAB45352.1| putative porphobilinogen deaminase [Streptomyces coelicolor A3(2)] gi|289701172|gb|EFD68601.1| porphobilinogen deaminase [Streptomyces lividans TK24] Length = 319 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 91/290 (31%), Positives = 155/290 (53%), Gaps = 15/290 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIG 59 M +K R+GTR S LA+A + + ++ V P + ++ ++T GD T+R L +IG Sbjct: 1 MTEKALRLGTRRSKLAMAQSGQVADAVSQVTGRP---VELVEITTYGD--TSREHLAQIG 55 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G G+F + L+ GE+D AVHS KD+PT +GL ++A RED RDV ++ A+ L Sbjct: 56 GTGVFVAALRDALLRGEVDFAVHSLKDLPTAQHEGLVVAAIPEREDPRDVVVARDARKLT 115 Query: 120 DLALHSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 DL + +GT + RR A L + +I + RG ++TR+ + + + A++LA AG Sbjct: 116 DLPRGARVGTGAPRRMAQLNAYARTHGMEIETVPIRGNVDTRIGYVRSGELDAVVLAAAG 175 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + R+ + + + L+++ P+PGQGA+ +E +N + ++ T +V ER+ Sbjct: 176 LNRVGRIDEVTDFLSVDTVLPAPGQGALAVECAADNASLIAALAELDDPFTRAAVTAERS 235 Query: 236 FLAELDGSCKSAIAGFA--YCKGST---LYFYGIVLASDGKIFHEVSRNG 280 LA L+ C + + A G T + G+V +DG ++S G Sbjct: 236 LLAALEAGCSAPVGALADLLADGQTVKEMRLRGVVGTTDGSTLVQLSTTG 285 >gi|19703980|ref|NP_603542.1| porphobilinogen deaminase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|25453023|sp|Q8RFP5|HEM3_FUSNN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|19714161|gb|AAL94841.1| Porphobilinogen deaminase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 298 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 103/266 (38%), Positives = 138/266 (51%), Gaps = 5/266 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60 KK IG+R S LALA A + L + P + I + T GD+ +N ++I Sbjct: 2 KKNIIIGSRGSILALAQANLVKDRLQGNY--PNLSFEIKEIVTSGDKDLKSNWENSDISL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE++L+ GEID AVHS KDMP K L A RED RDV +S L Sbjct: 60 KSFFTKEIEQELLDGEIDIAVHSMKDMPAVSAKSLICGAIPDREDPRDVLVSKNGL-LVT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 LPQGAKVGTSSLRRAMNLKTVRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRTG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E LN E FPP+P QG + I+ N+ + +E++K I++E V ER F Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKEILKSIHNEAIAKIVEIEREFSKIF 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVL 266 DG C + + ++ G + F + L Sbjct: 239 DGGCHTPMGCYSQVNGDKIKFTAVYL 264 >gi|72383664|ref|YP_293019.1| porphobilinogen deaminase [Prochlorococcus marinus str. NATL2A] gi|123773715|sp|Q46GS7|HEM3_PROMT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|72003514|gb|AAZ59316.1| hydroxymethylbilane synthase [Prochlorococcus marinus str. NATL2A] Length = 315 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 103/300 (34%), Positives = 152/300 (50%), Gaps = 5/300 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ R L H P I I ++T+GD+I + L +IG Sbjct: 1 MTLDQLRIASRRSQLAMVQTNWVRDELQREH--PDLVITIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117 KGLFT+E+E +++ G + AVHS KD+PT L GL + RED D + + Sbjct: 59 KGLFTKELEAQMLLGHAEIAVHSLKDLPTNLPDGLILGCITKREDPSDALVVNEKNQIHK 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L SV+GTSSLRR A L + D RG + TRL KL++ + ++LA AG++ Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRYHYPHLVFKDVRGNVITRLEKLDSGEYDCLILAAAGLQ 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +++ + + GQGA+ IE K +++K + HE T ER+FL Sbjct: 179 RLGFANRIHQLIPTDISLHAVGQGALGIECVSGQQKVLDILKTLEHESTSKRCLAERSFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + L G+V + DGK + G+ A IG D A ++ Sbjct: 239 RELEGGCQVPIGVRTEINNNELILEGMVASLDGKRLIRDIKKGSVSSAEEIGIDLANELK 298 >gi|322389389|ref|ZP_08062943.1| hydroxymethylbilane synthase [Streptococcus parasanguinis ATCC 903] gi|321143877|gb|EFX39301.1| hydroxymethylbilane synthase [Streptococcus parasanguinis ATCC 903] Length = 307 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 87/259 (33%), Positives = 146/259 (56%), Gaps = 8/259 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + ++GTR S LA+ L + H P + ++P T+GDR+ + +L IGGKG+ Sbjct: 2 RSIKVGTRKSQLAMTQTKMVVERLKECH--PEVDFELVPYKTQGDRLVHVSLQTIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLA 122 F +EIE+ L++ +ID A+HS KD+P+ L+ G I A RED+RD I +L L Sbjct: 60 FVKEIEQALLNKDIDIAIHSLKDVPSILVDGCTIGAIPEREDVRDCLIFREEGMTLATLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--- 179 +V+GTSS+RR+ L R+D+ RG I++R+ KL + AI+LA AG+KR+ Sbjct: 120 QGAVVGTSSIRRQVQLQSLRNDLQFKPLRGNIDSRIRKLQEGECDAIVLAAAGLKRIGYL 179 Query: 180 -KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + E L+ + F P+ QGA+ +E ++ + E++ I+ ++ + + ER+FL+ Sbjct: 180 DQSPSLNLEFLDPQTFIPAVSQGALAVECREDDEEVLEILASIHDKEVENCIQLERSFLS 239 Query: 239 ELDGSCKSAIAGFA-YCKG 256 ++ C + A Y G Sbjct: 240 LMNADCTFPVGAHAQYIDG 258 >gi|158317872|ref|YP_001510380.1| porphobilinogen deaminase [Frankia sp. EAN1pec] gi|158113277|gb|ABW15474.1| porphobilinogen deaminase [Frankia sp. EAN1pec] Length = 354 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 90/274 (32%), Positives = 148/274 (54%), Gaps = 24/274 (8%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 + ++P R+GTR S LA A + + +L P + ++P+ T GD+ + +++IGG Sbjct: 15 LARRPLRLGTRRSALARAQSEKVAETLRTRLSRP---VELVPIVTAGDQ-SQVAISQIGG 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + L++GEID AVHS KD+PT GL ++A R D RDV +S + + L + Sbjct: 71 TGVFVSALRDALLAGEIDLAVHSLKDLPTATPDGLVLAAVPRRADTRDVLVSPSGRRLSE 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT S RR A LL V+ RG ++TR+ K + + A++LA+AG+ RL Sbjct: 131 LGPGARVGTGSPRRAAQLLALGHGFEVVPIRGNVDTRIKKAIDGEVDAVVLAHAGLDRLD 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAI---CIETHVN--------NPKA--------QELVK-V 220 + + EI++ E P+PGQGA+ C+ T P+A EL++ V Sbjct: 191 RLDAVTEIISPEVMLPAPGQGALAIECVRTPAGGGPAHDQTGPEAGRGFDEGLAELLRFV 250 Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254 ++ + +V ERAFLA ++ C + + A+ Sbjct: 251 LDDATSSVAVRAERAFLAGIEAGCTAPVGALAHV 284 >gi|313901685|ref|ZP_07835116.1| porphobilinogen deaminase [Thermaerobacter subterraneus DSM 13965] gi|313468036|gb|EFR63519.1| porphobilinogen deaminase [Thermaerobacter subterraneus DSM 13965] Length = 362 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 104/312 (33%), Positives = 159/312 (50%), Gaps = 23/312 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A L H P + ++P++T GDR +R L + G F Sbjct: 6 LRIGTRASALARIQAQWVARQLETHH--PGLRVELVPVTTLGDRNRSRPLYALSSPGAFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-------------- 111 +E+E+ L+ G ID AVHSAKD+PT+L +GL+++A+ RED D + Sbjct: 64 KELEEALLEGRIDLAVHSAKDVPTRLPEGLELAAFPQREDPADALVIPRPATGRLSVRGP 123 Query: 112 -------SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN 164 S L L + +GTSSLRR+A L R D++V RG ++TRL +L+ Sbjct: 124 GGEEPPGSEARDLLAALPPGARVGTSSLRRQAWLRARRPDLAVEPARGNLDTRLRRLDEG 183 Query: 165 KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224 A+LLA AG++RL I ++ + P+PGQGA+ +E + + V+V++ Sbjct: 184 HWDALLLAAAGLRRLGFAGRISALVPPLELLPAPGQGALAVEIRAGDEAVRRRVQVLDRP 243 Query: 225 DTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284 + +V ERAFLAEL G+C+ + +A +G + G+V G + G+ D Sbjct: 244 EVSRAVRAERAFLAELGGTCRVPLGAWARVQGGRIVIDGMVAGPAGSPWLSGRGEGSLSD 303 Query: 285 AINIGRDAAQYI 296 GR A+ + Sbjct: 304 PEGTGRRLAEQL 315 >gi|296274257|ref|YP_003656888.1| porphobilinogen deaminase [Arcobacter nitrofigilis DSM 7299] gi|296098431|gb|ADG94381.1| porphobilinogen deaminase [Arcobacter nitrofigilis DSM 7299] Length = 312 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 94/248 (37%), Positives = 144/248 (58%), Gaps = 5/248 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL + ++ L+ + P I + STK D+I + L +IGGKGL Sbjct: 2 KKIVIATRKSKLALWQSEYIKAELLKHY--PDMVIELKTFSTKADKILDVPLAKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E L + E D AVHS KD+P + +G ++A R D RD F+S S+ DL Sbjct: 60 FTKELEIALENKEADIAVHSLKDVPVEFEEGFVLAALTKRFDPRDAFLSEKYASITDLPN 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++IGT+SLRR+ L R DI + D RG I TR+ KL + AI+LA G+++L+ E Sbjct: 120 GAIIGTTSLRRRMELKLLRPDIELKDLRGNINTRIAKLKAGEYDAIILAATGVQKLQIED 179 Query: 184 VIKEI--LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +K ++I++ PS GQ + IET ++NP+ E++ V++ ++ ER+F+ L+ Sbjct: 180 EVKYFTPISIDEMIPSMGQATLGIET-LDNPELVEILSVLHDKNAEIESTIERSFVHTLE 238 Query: 242 GSCKSAIA 249 G C+ I Sbjct: 239 GGCQVPIG 246 >gi|158287571|ref|XP_564464.3| AGAP011080-PA [Anopheles gambiae str. PEST] gi|157019715|gb|EAL41625.3| AGAP011080-PA [Anopheles gambiae str. PEST] Length = 599 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 104/284 (36%), Positives = 154/284 (54%), Gaps = 19/284 (6%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVII-PLSTKGDRITNRTLTEIGGKG 62 K R+G+R S LAL +T+ + + K+ P + I ++T GDR+ N++L +IG K Sbjct: 12 KTIRVGSRKSELALT---QTKHVISLLQKLNPDVVYEIHTMTTVGDRVLNKSLPKIGEKS 68 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119 LFT+++E L +G +D VHS KD+PT L G+ I A L RED RD + H +L Sbjct: 69 LFTKDLEDALRTGGVDFVVHSLKDLPTSLPLGMAIGAVLEREDPRDALVLNERHRGCTLA 128 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177 L S++GTSSLRR A L R+ S ++V D RG + TRL KL+ +K I+LA AG+ Sbjct: 129 TLPRGSIVGTSSLRRSAQLARYYSHLAVCDIRGNLNTRLAKLDAEASKFAGIILAQAGLV 188 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ K I +I+ + + GQGA+ +E N+ ++ + H +T + ER+FL Sbjct: 189 RMGWNKRIDQIIEPHEILYAVGQGALAVECRSNDEYILGMLGKLCHLETQCRILTERSFL 248 Query: 238 AELDGSCKSAIAGFAYCK----------GSTLYFYGIVLASDGK 271 L G C + +A K GS L G V + DGK Sbjct: 249 KTLGGGCSAPVAVRTDLKRRWRADDAEDGSPLVVEGAVWSLDGK 292 >gi|260654411|ref|ZP_05859901.1| hydroxymethylbilane synthase [Jonquetella anthropi E3_33 E1] gi|260631044|gb|EEX49238.1| hydroxymethylbilane synthase [Jonquetella anthropi E3_33 E1] Length = 714 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 87/271 (32%), Positives = 143/271 (52%), Gaps = 8/271 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P R+ +R S LA+A ++R +H+ ++ IIP T+GD + +R L GGKGL Sbjct: 424 RPLRLASRESELAMA---QSRLVAERLHEATGFDVEIIPFRTRGDAVADRRLESAGGKGL 480 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ ++SG+ D AVHS KDMP+ GL +A + R+ D + + + + Sbjct: 481 FVKELERAILSGQADLAVHSLKDMPSSCPDGLAFAALMDRQTAFDCLVLRPGLTGRPVR- 539 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 IGTSS RR A SD + RG + TRL+KL+ + A++LA AG++RL ++ Sbjct: 540 ---IGTSSARRIAQGRALFSDAQFVPLRGNLRTRLSKLDGGEFDALILAEAGLRRLGLQE 596 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + + + + PS GQG + ++ + P +LV ++ ERAF+ L+G Sbjct: 597 RVSRVFSADQMIPSAGQGTLAVQCPFDGP-VFDLVSQLDEPAVRTCCLAERAFIDRLNGG 655 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFH 274 C + +A G T+ G+ + DGK Sbjct: 656 CTAPHGAYARVDGETIEMIGLYVRPDGKTLS 686 >gi|86609244|ref|YP_478006.1| porphobilinogen deaminase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557786|gb|ABD02743.1| porphobilinogen deaminase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 310 Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 103/297 (34%), Positives = 153/297 (51%), Gaps = 9/297 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R S LAL L + H P + + LST+GD I + L +IG KGLFT Sbjct: 1 MRIASRKSELALVQTQWVMGQLQEHH--PGLPLELNTLSTQGDIILDVALAKIGDKGLFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH- 124 +E+E L++G D AVHS KD+PT+L +GL + A RED D + + +D L Sbjct: 59 KELEVSLLNGSSDLAVHSLKDLPTRLPEGLVLGAITRREDPLDALV--VGEKFRDYRLAT 116 Query: 125 ----SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 +VIGTSSLRR A L + D RG + TRL KL + ++LA AG+KRL Sbjct: 117 LPEGTVIGTSSLRRLAQLRHAFPHLHFKDVRGNLNTRLAKLERGEYDGLILAVAGLKRLG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K I E+L+ + GQG++ IE + + EL++ + + ERAFL L Sbjct: 177 KADRIHEVLDPGVSLYAVGQGSLGIECRQGDERILELIRPLADAEATARCLAERAFLRAL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +G C+ I + +G L+ G+V DG+ ++ G+ D +G A+ ++ Sbjct: 237 EGGCQVPIGVHSQVQGEALHLTGMVADLDGRRLIRDTQTGSTADPEAVGMALAEKLK 293 >gi|109108914|ref|XP_001101764.1| PREDICTED: porphobilinogen deaminase isoform 6 [Macaca mulatta] Length = 391 Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 100/269 (37%), Positives = 143/269 (53%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L ++ P II +ST GD+I + L++IG K LFT Sbjct: 51 IRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 108 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 109 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 168 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181 SV+GTSSLRR A L R S + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 169 EKSVVGTSSLRRAAQLQRKFSHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 228 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 229 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 288 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 289 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 317 >gi|330804637|ref|XP_003290299.1| porphobilinogen deaminase [Dictyostelium purpureum] gi|325079586|gb|EGC33179.1| porphobilinogen deaminase [Dictyostelium purpureum] Length = 319 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 162/300 (54%), Gaps = 10/300 (3%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+ IG+R S LA+ R L +++ P + I + T GD++ + +L++IG K Sbjct: 3 ERNTVYIGSRKSQLAMLQTEWVRDRLQELN--PNIKVEIKTMDTTGDKVLDVSLSKIGDK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ----- 116 GLFT+E+E +++G +D AVHS KD+PT+L GL++ A R D FI++ + Sbjct: 61 GLFTKELEDMMLNGSVDLAVHSLKDIPTRLPDGLKLGAITKRYSTSDAFIANVKKHGKDC 120 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYA 174 L DL ++IG+SSLRR A L + + D RG + TR NKL+ +++ ++LA A Sbjct: 121 KLSDLPNGALIGSSSLRRVAQLKKSYPHLQFKDIRGNLNTRFNKLDAVDSEYDGMILAVA 180 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G++R+ I +++ E + GQGA+ IE N+P +++++ +NH ++ ER Sbjct: 181 GLERMNLTDRISQVIPDEISLYAVGQGALGIECKENDPFIEKILEPLNHSESMMRCKAER 240 Query: 235 AFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 + L EL+G C I + + L GIVL DG + E G +G+D A Sbjct: 241 SMLRELEGGCHVPIGVVTKINQNNILEIKGIVLNLDGSKYIESYIEGPVEQYEQLGKDIA 300 >gi|326336014|ref|ZP_08202190.1| hydroxymethylbilane synthase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691811|gb|EGD33774.1| hydroxymethylbilane synthase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 308 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 109/319 (34%), Positives = 159/319 (49%), Gaps = 35/319 (10%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK RIGTR S LAL A + +S L++ P ++P+ ++GD + L +G G Sbjct: 2 KKTLRIGTRDSELALWQARKVQS-LLEALGYP---TTLVPVKSQGDLTLDIPLYTMGITG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV--------FISHT 114 +FT+ ++ ++ G ID AVHS KD+PT L KG+ A L R +++DV F+SHT Sbjct: 58 VFTKVLDVAMLQGVIDIAVHSMKDVPTTLPKGIIKGAILKRANVQDVLVYKENLDFLSHT 117 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 H+ I T SLRRKA LR V + RG I TRL KL+ + + A A Sbjct: 118 ---------HATIATGSLRRKAQWLRRFPTHLVENLRGNINTRLEKLHKSPWQGAIFAAA 168 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 ++RL K++V ++ P+P QGAI + + + +E + +IN + T N ER Sbjct: 169 ALERLDKKEV--NAFPLDWMTPAPAQGAIMVVSKAEDTYTKEALALINDQPTDIETNIER 226 Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI------ 288 FL L+G C + I A G T+ F G + + DGK EV + + D N Sbjct: 227 RFLKRLEGGCTAPIGAKATLDGKTISFVGNLFSLDGKHAIEVKKTISLDDIENFPEACAD 286 Query: 289 ------GRDAAQYIRFISN 301 G D Q IR + N Sbjct: 287 EILLKGGADLMQEIRKVMN 305 >gi|291546286|emb|CBL19394.1| hydroxymethylbilane synthase [Ruminococcus sp. SR1/5] Length = 257 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 89/255 (34%), Positives = 139/255 (54%), Gaps = 4/255 (1%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 + T GD I +RTL ++GGKGLF +E++K LI G +VHS KDMP ++ + L + A+ Sbjct: 1 MKTTGDIILDRTLDKVGGKGLFVKELDKALIDGRSILSVHSLKDMPMEVPEELPLLAFSK 60 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 RED RDV + S +L +G SSLRR L + D+ V RG ++TRL KL+ Sbjct: 61 REDPRDVLVLPEGAS--ELDKSKPLGCSSLRRTLQLKKLYPDMDVRSIRGNLQTRLRKLD 118 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 + A++LA AG+KRL I ++ P+ GQG + ++ +A + ++ Sbjct: 119 EGQYSALILAAAGLKRLGLGSRINRYFTADEIIPAAGQGILAVQGR--KGEAYDFLEGYC 176 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 +D W + + ERAF+ LDG C S +A A G +Y G+ + + GN+ Sbjct: 177 DKDAWTAGSAERAFVKLLDGGCSSPVAAHAEILGDEIYLRGLYYNEKDGSYVTGTLRGNK 236 Query: 283 CDAINIGRDAAQYIR 297 DA ++GR+ A+ +R Sbjct: 237 ADAESLGRELAETLR 251 >gi|296138401|ref|YP_003645644.1| porphobilinogen deaminase [Tsukamurella paurometabola DSM 20162] gi|296026535|gb|ADG77305.1| porphobilinogen deaminase [Tsukamurella paurometabola DSM 20162] Length = 318 Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 95/276 (34%), Positives = 145/276 (52%), Gaps = 14/276 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA A R +L+ P +VI+ +T GD +++ + +IG G+F Sbjct: 14 PLRIGTRGSLLATTQAGTVRDALIAAGH--PAELVIV--TTPGD-LSSDPVEKIG-VGVF 67 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T + L +GE+D AVHS KD+PT L ++A PRED RD ++ L +L Sbjct: 68 TSALRDALANGEVDVAVHSYKDLPTAPDDRLVLAAVPPREDSRDALVARDGMVLGELPAG 127 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SV+GTSS RR L + + RG +++RL K+ + + AI++A AG+KR+ + Sbjct: 128 SVVGTSSPRRATQLTALGLGLEIRPLRGNLDSRLRKVADGELDAIVVALAGLKRIGRHDE 187 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E L+ P+P QGA+ +E + Q ++ ++ T +V ERA LAEL+ C Sbjct: 188 VTEALDPVQMLPAPAQGALAVECRRGDADLQSVLSELDDHWTRAAVTAERALLAELEAGC 247 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 + + A S L DG+IF E+S G Sbjct: 248 TAPVGAIAEVVES--------LDDDGRIFEELSLRG 275 >gi|194477303|ref|YP_002049482.1| porphobilinogen deaminase [Paulinella chromatophora] gi|171192310|gb|ACB43272.1| porphobilinogen deaminase [Paulinella chromatophora] Length = 313 Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 99/269 (36%), Positives = 141/269 (52%), Gaps = 5/269 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R S LA+ R L H P I I ++T+GD+I + L +IG KGLFT Sbjct: 6 LRIASRRSQLAMVQTHWVRDQLAQAH--PSLEITIETMATQGDKILDVALAKIGDKGLFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122 +E+E +++ D AVHS KD+PT L GL + RED D + + + L L Sbjct: 64 KELEAQMLVNRADIAVHSLKDLPTNLPDGLVLGCVTEREDPADALVINKKYQDRLLDTLP 123 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S++GTSSLRR A L + D RG + TRL KL++ + ++LA AG++RL Sbjct: 124 NGSIVGTSSLRRLAQLRHHFPHLVFKDIRGNVITRLEKLDSGEFDCLILAAAGLQRLGLG 183 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EI++ + GQGA+ IE + + +KV+ H T ERAFL EL+G Sbjct: 184 SRIHEIIDSSISLHAVGQGALGIECRDGDLDILKQIKVLEHAPTNYRCLAERAFLRELEG 243 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 C+ I KG+ L G+V + DGK Sbjct: 244 GCQVPIGVNTRIKGNQLILTGMVASLDGK 272 >gi|118101810|ref|XP_417846.2| PREDICTED: similar to Hydroxymethylbilane synthase [Gallus gallus] Length = 358 Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 99/271 (36%), Positives = 140/271 (51%), Gaps = 6/271 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA L + + P I+ +ST GD+I + L++IG K L Sbjct: 16 RAIRVGTRRSQLARIQTDSVVEMLREFY--PDLCFEIVAMSTTGDKILDTALSKIGEKSL 73 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 74 FTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAICKRENPLDAVVFHPKNCGKTLSV 133 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRL 179 L SVIGTSSLRR A L + + D RG + TRL KL+ + AI+LA AG+KR+ Sbjct: 134 LPEKSVIGTSSLRRAAQLKKKFPQLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRM 193 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E I ++L+ ED + GQGA+ +E + + +V + +T ERAF+ Sbjct: 194 GWENRIGQLLSPEDCLYAVGQGALAVEVRAKDQETLNMVSALQDGETVLCCIAERAFMKR 253 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 L+G C +A K LY G V + DG Sbjct: 254 LEGGCSVPVAVNTMLKDGQLYLTGAVYSLDG 284 >gi|21227846|ref|NP_633768.1| porphobilinogen deaminase [Methanosarcina mazei Go1] gi|23821683|sp|Q8PW57|HEM3_METMA RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|20906258|gb|AAM31440.1| Porphobilinogen deaminase [Methanosarcina mazei Go1] Length = 316 Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 100/267 (37%), Positives = 147/267 (55%), Gaps = 9/267 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI-GGKGLFTE 66 IGTR S LALA E + L+ K +I II T GDR T+R L + GG G F Sbjct: 3 IGTRGSQLALAQT-ENVARLLK-EKGVETSIKII--KTSGDRFTDRPLHAVSGGVGAFVR 58 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 E++ +++GEID AVHS KDMPT K + A L R+ D+ +++ L +L S+ Sbjct: 59 ELDDVMLAGEIDIAVHSMKDMPTIRPKAIPTVAVLKRDTPFDILLTYDGTPLDELPEQSI 118 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGTSSLRR A + R+R DI + RG I+TRL KL + I+LA AG++R+ E + Sbjct: 119 IGTSSLRRTAQIRRYRPDIITQNLRGNIDTRLRKLREGQYDGIMLAKAGLERMGWE-IEG 177 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 EI + + F PSP QG + + T +A+ V +++H ++ ER +AEL G C + Sbjct: 178 EIFSPDFFCPSPNQGTVAVVTR-EGTEAEAAVSMLDHTESRIVTEIERILIAELGGGCTT 236 Query: 247 AIAGFAYCKG--STLYFYGIVLASDGK 271 + +A ++ VL+ DG+ Sbjct: 237 PVGSYAEITPDRQEIHVRAEVLSLDGR 263 >gi|123965794|ref|YP_001010875.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9515] gi|158512730|sp|A2BVF7|HEM3_PROM5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123200160|gb|ABM71768.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9515] Length = 316 Score = 152 bits (383), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 102/303 (33%), Positives = 161/303 (53%), Gaps = 9/303 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +I +R S LA+ + L IP + I ++T+GD+I + L +IG Sbjct: 1 MTKLKLKIASRRSKLAMVQTLWVKEQLE--KNIPNLEVSIESMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---S 117 KGLFT+E+E +++ G+ D AVHS KD+PT L GL++ RED D + + Sbjct: 59 KGLFTKELEAQMLIGKADIAVHSLKDLPTNLPDGLKLGCITKREDPSDALVVNKKNEIYQ 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L S++GTSSLRR A L ++ D RG + TR+ KL++ + I+LA AG+K Sbjct: 119 LESLPAGSIVGTSSLRRLAQLRYKFPYLNFKDIRGNVITRIEKLDSGEFDCIILAAAGLK 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC--ERA 235 RL E I +I+ E + GQGA+ IE + + +++ V+ ED S C ER+ Sbjct: 179 RLGFESRIHQIIPNEISLHAVGQGALGIECKSEDKEVLKIISVL--EDKASSQKCLAERS 236 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 FL EL+G C+ I + + + G+V + DGK + +GN +G+ A+ Sbjct: 237 FLRELEGGCQVPIGVNSSIQNDEICLKGMVASIDGKKLIKDESSGNVKYPEEVGKKLAEK 296 Query: 296 IRF 298 ++ Sbjct: 297 LKL 299 >gi|68068433|ref|XP_676126.1| porphobilinogen deaminase [Plasmodium berghei strain ANKA] gi|56495675|emb|CAH94424.1| porphobilinogen deaminase, putative [Plasmodium berghei] Length = 383 Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 109/352 (30%), Positives = 176/352 (50%), Gaps = 62/352 (17%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVII--PLSTKGDRITNRTLTEIGGK 61 K IGTR SPLA+ + + + L+ K NI +I P+ T GD+I ++T+ GGK Sbjct: 16 KEIIIGTRNSPLAIKQSEKVKKKLLTYFKKINENINVILKPIKTTGDKILDKTVGSFGGK 75 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL--- 118 G+FT+E++++LI +D VHS KD+PT L + +S +L R+ I D F+S +SL Sbjct: 76 GIFTKELDEELIKNNVDICVHSLKDIPTVLPDNIHLSCFLKRDTINDAFLSIKYKSLRDI 135 Query: 119 ---------------------KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETR 157 KD+ L I TSSLRR + + ++ + RG I TR Sbjct: 136 NKELSQKNITNNISSSSHVIDKDIDLPRTIATSSLRRTSQIRYKYKNLKLKFIRGNINTR 195 Query: 158 LNKLNNNKAHAILLAYAGIKRLKKEKVIKEIL--NIEDFP-------------------- 195 + KL N +I++A+ G++RL +KV+ +I+ NI+ P Sbjct: 196 IAKLFNETFDSIIIAFCGLERLISKKVLGQIMKNNIKSKPYIINYKDISIDLSRLNIQKL 255 Query: 196 ------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 P+ QG I + ++ NN + +++K IN+E + + ER FL ++DGSC I Sbjct: 256 NTNIMCPALCQGIIAVTSNKNNSEISQILKNINNEKSQIMGSIERTFLHKIDGSCTMPIG 315 Query: 250 GFAYCKGSTLYFYGIVLASDG----KIFHEVSRNGNRCDAINIGRDAAQYIR 297 G+ + ++F I+ +G KI +V R+ N D I +AA+ I+ Sbjct: 316 GYTKFSKNKIFFNAIINDINGLENYKI--KVVRHLNNLDG--IADEAAEKIK 363 >gi|307331356|ref|ZP_07610476.1| porphobilinogen deaminase [Streptomyces violaceusniger Tu 4113] gi|306882979|gb|EFN14045.1| porphobilinogen deaminase [Streptomyces violaceusniger Tu 4113] Length = 329 Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 99/303 (32%), Positives = 158/303 (52%), Gaps = 19/303 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIGGKGL 63 P R+GTR S LA+A + + +V P + ++ ++T GD T+R L +IGG G+ Sbjct: 15 PLRLGTRRSALAMAQSGLVADLVREVTGRP---VELVEITTYGD--TSREHLAQIGGTGV 69 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F + + L+SGEID AVHS KD+PT GL+++A RED RD I+ + L Sbjct: 70 FVSALREALLSGEIDLAVHSLKDLPTAEPDGLRLAAIPRREDPRDALIARDGLTFAQLPP 129 Query: 124 HSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 S IGT S RR A L W DI + RG ++TR+ + + + A++LA AG+ RL Sbjct: 130 GSRIGTGSPRRAAQLNAWARAFGLDIETVPIRGNVDTRIGYVRSGRLDAVVLAAAGLIRL 189 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E+L++ P+PGQGA+ +E ++ + I+ T +V ER+ LA Sbjct: 190 GRIGEATELLDVGHVLPAPGQGALAVECAASSVALTARLAEIDDPYTRVAVTAERSLLAA 249 Query: 240 LDGSCKSAIAGFA--YCKG---STLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGR 290 L+ C + + A G + + G+V +DG ++S G + +A ++GR Sbjct: 250 LEAGCSAPVGALADLLADGQAVTEMRLRGVVGTTDGTTLVQLSTTGPVPASPSEAGDLGR 309 Query: 291 DAA 293 + A Sbjct: 310 ELA 312 >gi|291523525|emb|CBK81818.1| porphobilinogen deaminase [Coprococcus catus GD/7] Length = 799 Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 97/277 (35%), Positives = 142/277 (51%), Gaps = 20/277 (7%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P I I TKGDR +++L+ G KG FT+E+E ++ G ID AVHSAKD+P +L + Sbjct: 16 PSIEIEIAGFETKGDRHLDKSLSAFGSKGAFTKELEGAMLDGRIDLAVHSAKDLPVELPE 75 Query: 94 GLQISAYLPREDIRDVFISHTAQS--LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFR 151 GL + A L R D RDV++S + +++ +V+GT SLRR + + + + D R Sbjct: 76 GLTVGAVLKRGDSRDVWVSLRREFSIIEECKEKTVVGTGSLRRALQIQQICPGVDIRDIR 135 Query: 152 GKIETRLNKLNNNKAHAILLAYAGIKRL---------------KKEKVIKEILNIEDFPP 196 G + TRL KL++ I+LA AG+KRL +++ EIL+ E F P Sbjct: 136 GNVPTRLKKLSDGMYDGIILAAAGLKRLGYLSEDCETEGSFEAEEQTFFYEILSKEQFLP 195 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + GQG I +ET + ++ ++ I+ EDTW ER+FL + G C A A G Sbjct: 196 AAGQGIIALETRQKD--CEDCMQAIHDEDTWQMFLTERSFLRAIGGGCNEAAAVDVRMDG 253 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 + A DG E + G RC I R A Sbjct: 254 QKVSVRA-RYAGDGLHMKEKTVTGTRCGNIEEDRKLA 289 >gi|254388880|ref|ZP_05004112.1| porphobilinogen deaminase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|254393333|ref|ZP_05008481.1| porphobilinogen deaminase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294813175|ref|ZP_06771818.1| Porphobilinogen deaminase 1 [Streptomyces clavuligerus ATCC 27064] gi|326441528|ref|ZP_08216262.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064] gi|197702599|gb|EDY48411.1| porphobilinogen deaminase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|197706968|gb|EDY52780.1| porphobilinogen deaminase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294325774|gb|EFG07417.1| Porphobilinogen deaminase 1 [Streptomyces clavuligerus ATCC 27064] Length = 319 Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 92/309 (29%), Positives = 159/309 (51%), Gaps = 17/309 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ R+GTR S LA+A + + +V ++ + ++ ++T GD I+ L +IGG Sbjct: 1 MTERALRLGTRRSMLAMAQSGQV---AQEVRRLTGRPVELVEITTYGD-ISREQLAQIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L+ GE+D AVHS KD+PT L ++A RED RDV ++ + Sbjct: 57 TGVFVAALREALLRGEVDFAVHSLKDLPTGQPDELALAAIPRREDPRDVLVARDGLTFDR 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSD----ISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + +GT S RR A L + I + RG I+TR+ + + K A++LA AG+ Sbjct: 117 LPDGARVGTGSPRRMAQLNAYARAHGLRIETVPIRGNIDTRIGYVRSGKLDAVVLAAAGL 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ + + ++L+++ P+PGQGA+ IE + + ++ T +V ER+ Sbjct: 177 NRIGRADEVTDVLSVDSVLPAPGQGALAIECAAADADLAATLGALDDPHTRVAVTAERSL 236 Query: 237 LAELDGSCKSAIAGFAYCKG-----STLYFYGIVLASDGKIFHEVSRNG----NRCDAIN 287 LA L+ C + + A G + + G+V +DG ++S G + DAI Sbjct: 237 LAALEAGCSAPVGALADLLGDEEVVTEMRLRGVVGTTDGSTLVQLSTTGPVPTSHGDAIA 296 Query: 288 IGRDAAQYI 296 +GR+ A + Sbjct: 297 LGRELASEM 305 >gi|193638791|ref|XP_001948145.1| PREDICTED: porphobilinogen deaminase-like isoform 1 [Acyrthosiphon pisum] gi|328705509|ref|XP_003242834.1| PREDICTED: porphobilinogen deaminase-like isoform 2 [Acyrthosiphon pisum] Length = 377 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 93/260 (35%), Positives = 144/260 (55%), Gaps = 14/260 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++K R+G+R S LAL S L ++H P I+ ++T GDR+ ++ L +IG K Sbjct: 5 DRKTIRVGSRKSELALIQTKFVISQLKELH--PEIEFEIVSMTTMGDRVLDKPLPKIGEK 62 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 LFT+++E L+SG +D VHS KD+PT + G I A L R+D RD + L Sbjct: 63 SLFTKDLEVALLSGTVDFIVHSLKDLPTVMEIGTTIGAILKRDDPRDALVLRDDCKEYQL 122 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA---------HAI 169 L S IGTSSLRR A L R ++ V D RG + TRL KL+++++ I Sbjct: 123 DSLPSKSFIGTSSLRRTAQLKRKFPNLQVSDVRGNLNTRLKKLDSSQSTGDNTNTNYSGI 182 Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 +LA AGI+R+ EK + +I++ + + GQGA+ +E + + E+++ ++H +T Sbjct: 183 ILALAGIQRMGWEKRVSQIIDSDVMLYAVGQGALAVECRLGDDYILEMLEPLHHYETVLQ 242 Query: 230 VNCERAFLAELDGSCKSAIA 249 V ER FL L G C + + Sbjct: 243 VVAERGFLTRLGGGCSAPVG 262 >gi|254390668|ref|ZP_05005882.1| porphobilinogen deaminase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294812261|ref|ZP_06770904.1| Porphobilinogen deaminase 2 [Streptomyces clavuligerus ATCC 27064] gi|326440901|ref|ZP_08215635.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064] gi|197704369|gb|EDY50181.1| porphobilinogen deaminase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294324860|gb|EFG06503.1| Porphobilinogen deaminase 2 [Streptomyces clavuligerus ATCC 27064] Length = 311 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 95/274 (34%), Positives = 139/274 (50%), Gaps = 6/274 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 +E + RI +R SP+ALA R+ L P ++P++T GDR L +GG Sbjct: 2 VETEVMRIVSRSSPMALAQVERVRAELAVAR--PGVRTEVVPVTTSGDRWMG-DLAALGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSL 118 KG FT+E++ L++GE D AVH KD+P L G +A+L R+DIRD + +L Sbjct: 59 KGAFTKEVDAALLAGEADLAVHCMKDVPADRPLPAGTTFAAFLRRDDIRDALVHPGGLTL 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L + IGTSS+RR A L + + RG RL KL A A+LLA +G++R Sbjct: 119 DELPDGTRIGTSSVRRIAQLASSHPQLECVPMRGNANRRLEKLAAGDADALLLAVSGLER 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + VI E+L+ + P G G + ++ + + + V + T V ER L Sbjct: 179 IGRTDVISEVLSADVMCPPIGAGVLALQCREEDEETIDAVSGLGDPATHREVTAERMLLH 238 Query: 239 ELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGK 271 L G C S IAG+A +G L V DGK Sbjct: 239 VLQGHCNSPIAGYARAERGGELSLRAKVFTPDGK 272 >gi|207723608|ref|YP_002254006.1| porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase) (hmbs) (pre-uroporphyrinogen synthase) protein [Ralstonia solanacearum MolK2] gi|207742664|ref|YP_002259056.1| porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase) (hmbs) (pre-uroporphyrinogen synthase) protein [Ralstonia solanacearum IPO1609] gi|206588811|emb|CAQ35773.1| porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase) (hmbs) (pre-uroporphyrinogen synthase) protein [Ralstonia solanacearum MolK2] gi|206594058|emb|CAQ60985.1| porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase) (hmbs) (pre-uroporphyrinogen synthase) protein [Ralstonia solanacearum IPO1609] Length = 302 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 92/239 (38%), Positives = 137/239 (57%), Gaps = 1/239 (0%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P ++ I+ ++T+GD+I +R+L ++GGKGLF +E+E L G D AVHS KD+P +L Sbjct: 16 PACDVSILGMTTRGDQILDRSLAKVGGKGLFVKELEVALAEGRADLAVHSLKDVPMELPP 75 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 G + A L RED RD F+S+ L L +V+GTSSLRR+A L + + RG Sbjct: 76 GFALPAILEREDPRDAFVSNQYADLAALPAGAVVGTSSLRREASLRARFPHLVIQPLRGN 135 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 ++TRL KL+ AI+LA AG+KRL + I+ ++ + P+ GQGA+ IET + Sbjct: 136 LDTRLAKLDRGDYAAIILAAAGLKRLGLSERIRAVIASDVSLPAAGQGALGIETRADRTD 195 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGK 271 Q + ++H T +V ERA L GSC+ +A FA + L V + DG+ Sbjct: 196 VQAWLAPLHHLPTALAVTAERAVSRRLGGSCQVPLAAFAHWTDAGALRLRAFVASQDGR 254 >gi|257791816|ref|YP_003182422.1| porphobilinogen deaminase [Eggerthella lenta DSM 2243] gi|257475713|gb|ACV56033.1| porphobilinogen deaminase [Eggerthella lenta DSM 2243] Length = 327 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 153/307 (49%), Gaps = 10/307 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A L P ++ + + TKGDRI L++IG KGLFT Sbjct: 4 MRIGTRGSKLALWQAHHVADLLRAAS--PGMDVSVEVVKTKGDRILGVALSKIGDKGLFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L G +D VHS KD+PT L +GL ++ L R D RDV ++ + + L S Sbjct: 62 KELEQALFDGRVDVCVHSMKDVPTALPEGLALAGCLIRADARDVLVAASGTTFAGLPAGS 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT +LRR + L R D+ ++ RG ++TR+ K+ + A++LA AGI+R+ + Sbjct: 122 RVGTGALRRLSQLRAVRDDLDYVEVRGNLDTRIAKVRDGALDAVVLAAAGIERMGWSAEV 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E +++ P+ GQGAI +E ++ + + T V ER + LDG C+ Sbjct: 182 AEAFSVDTVVPAVGQGAIGLEVRADDERTARACAQVRCAATDACVAAERHVMRALDGGCQ 241 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG-----KIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 I +A + L V + DG S+ N DA+ A + R ++ Sbjct: 242 VPIGAYARYEEGLLVLDAFVGSLDGSHVLRSRLSAASQPPNDTDAVEA---AVREARALA 298 Query: 301 NKNVFNF 307 + V F Sbjct: 299 QRAVEEF 305 >gi|317507248|ref|ZP_07964994.1| porphobilinogen deaminase [Segniliparus rugosus ATCC BAA-974] gi|316254442|gb|EFV13766.1| porphobilinogen deaminase [Segniliparus rugosus ATCC BAA-974] Length = 309 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 99/305 (32%), Positives = 154/305 (50%), Gaps = 10/305 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA A R ++ + + +VI+ +T GDR++ + EIG G+FT Sbjct: 2 IRVGTRGSLLATTQAATVRDAIRALGE--QAELVIV--NTIGDRVSG-PIVEIG-VGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + L++ EID AVHS KD+PT + A R D RDV +S + L DL S Sbjct: 56 SALRDALLADEIDVAVHSLKDLPTAQDPRFSLVAVPERADPRDVLVSRSGSRLADLPPGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT + RR A L R+D+ + RG +++R+ K+ + AI++A AG+ RL +E+ Sbjct: 116 AVGTGAPRRSAQLRLARADLEIQPIRGNLDSRMRKVATAECDAIVVARAGLLRLGREQEA 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKA-QELVKVINHEDTWDSVNCERAFLAELDGSC 244 EIL+ P+PGQGA+ +E P + E++ ++HE + + ERA LAEL C Sbjct: 176 TEILDPAVMLPAPGQGALAVECRSEAPVSLTEVLGRLDHEHSRVTSAAERAVLAELSAGC 235 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + A TL V A DG +++ N A +GR A+ +R + Sbjct: 236 SGPVGALARIDAQTLRVEAAVCALDGSRQIREAQSAQLLNESHAAALGRRVAESLRSMGA 295 Query: 302 KNVFN 306 + Sbjct: 296 MELVG 300 >gi|261749160|ref|YP_003256845.1| porphobilinogen deaminase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497252|gb|ACX83702.1| porphobilinogen deaminase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 310 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 101/277 (36%), Positives = 144/277 (51%), Gaps = 21/277 (7%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR SPLA++ A E + L H++ + + + ++GD I N L + G+ Sbjct: 3 KIIRIGTRNSPLAISQAIEVQKVL---HRLGYCSHLFF-IKSEGDLIQNIPLYKFKKVGI 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH-TAQSLKDLA 122 FT + L+SG+ID AVHS KD+PT L + + +SAYL R D+ I ++ L + Sbjct: 59 FTRNLTDVLLSGKIDMAVHSLKDVPTSLPEKIVLSAYLKRGSFSDLLIYQGSSNFLLNSK 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +VI T SLRR+A +++D RG I TRL KL NN + A G++RL Sbjct: 119 IEAVIATGSLRRRAFWKNRYPHHTIVDLRGNINTRLKKLYNNSWKGAIFAKVGLERLG-- 176 Query: 183 KVIKEILN-IEDFP--------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 +LN +E F PSPGQG I + T +N L K ++ +T S N E Sbjct: 177 -----LLNDLEGFNFKVLDWMIPSPGQGIIVVSTRKDNEWIHYLTKELDDRNTRLSANIE 231 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 R FL L G C + I A K +YF GI+ + DG Sbjct: 232 RQFLKTLGGGCVTPIGAHAIIKNKIIYFTGILFSLDG 268 >gi|309790863|ref|ZP_07685407.1| porphobilinogen deaminase [Oscillochloris trichoides DG6] gi|308227150|gb|EFO80834.1| porphobilinogen deaminase [Oscillochloris trichoides DG6] Length = 353 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 152/309 (49%), Gaps = 29/309 (9%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LA+ + ++ H + +I STKGDRI + L+ +G KGLF +E Sbjct: 23 LGTRGSKLAVTQSGMMADAMRAAHAGLEVEMQLI--STKGDRILDVALSAVGDKGLFVKE 80 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---------SL 118 +E+ L+ ++D VHS KD+P+ + GL ++A+ PR D RD + + S+ Sbjct: 81 LEQALLDNQVDFCVHSCKDLPSVVPDGLTLAAFPPRADARDALVVMESAVGDLDLSNFSM 140 Query: 119 KDLAL---HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 +D L +V+GTSSLRR + R D+ + D RG ++TRL KL + + AI+LA AG Sbjct: 141 QDSPLLRQGAVVGTSSLRRACQIRAIRPDLDLRDVRGNVDTRLRKLADGQFEAIILASAG 200 Query: 176 IKRLK---------------KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220 + RL + + + P+ QG + IE + L+ Sbjct: 201 LDRLGFTDATIDGPRHFEAVDARFVALPIPTTQMLPAVSQGILAIECRAADADTISLLGA 260 Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 ++H + + ERAFLA L+G C+ IA FA +G L G+V + DG G Sbjct: 261 LDHAPSRAAALAERAFLARLEGGCQVPIAAFAVVEGENLRLRGMVGSLDGTTQVRGELVG 320 Query: 281 NRCDAINIG 289 + D IG Sbjct: 321 SLADPAAIG 329 >gi|319760696|ref|YP_004124634.1| porphobilinogen deaminase [Candidatus Blochmannia vafer str. BVAF] gi|318039410|gb|ADV33960.1| porphobilinogen deaminase [Candidatus Blochmannia vafer str. BVAF] Length = 310 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 96/270 (35%), Positives = 139/270 (51%), Gaps = 2/270 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR S LA+ + + L H P I ++P+ T GD+ N T Sbjct: 1 MNTKFLRIATRKSRLAICQSEYVCNELKRFH--PNIKIKLVPIVTTGDKFFNSTTKIKIK 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG F +E+E LI D AVHS KDM L L + R D RD F+S ++ Sbjct: 59 KGAFIKELEYALIENRADIAVHSMKDMTASLPNELILPILCKRIDPRDAFVSIKYSNIDM 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S+IGTSSLRR+ + RSD+++ + RG I+TR+ KL+ K AI+LA AG+ RL Sbjct: 119 LPSGSIIGTSSLRRQCQIQARRSDLTLHNLRGNIDTRIKKLHQGKYDAIILAVAGLNRLH 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + IK +N +D P+ GQGAI IE + L+ + H++T + ERA L Sbjct: 179 LTQYIKTYINPKDLLPAMGQGAIAIECRKKDIDTLSLLSPLYHQETSLRIQSERAVTTYL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 +G C+ IA ++ ++ ++ DG Sbjct: 239 EGYCQFPIASYSEIHNHQIWLRALIGLPDG 268 >gi|297690415|ref|XP_002822614.1| PREDICTED: porphobilinogen deaminase-like isoform 2 [Pongo abelii] gi|297690417|ref|XP_002822615.1| PREDICTED: porphobilinogen deaminase-like isoform 3 [Pongo abelii] gi|297690419|ref|XP_002822616.1| PREDICTED: porphobilinogen deaminase-like isoform 4 [Pongo abelii] Length = 344 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 99/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L ++ P II +ST GD+I + L++IG K LFT Sbjct: 4 IRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 62 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFAGKTLETLP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181 SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 122 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 182 HNGVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 242 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 270 >gi|308184042|ref|YP_003928175.1| porphobilinogen deaminase [Helicobacter pylori SJM180] gi|308059962|gb|ADO01858.1| porphobilinogen deaminase [Helicobacter pylori SJM180] Length = 306 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 152/289 (52%), Gaps = 7/289 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK IG+R S LAL A + L I ++ TKGD+I + L +IGG Sbjct: 1 MEK--LVIGSRGSELALWQANYIKERLKKECLIESEIQIV---KTKGDKILDTPLNKIGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L Sbjct: 56 KGLFTKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMS 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG++RL Sbjct: 116 LPKGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLQRLN 175 Query: 181 KEKV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ ++E+ PS GQGA+ +E N+ L K +N E++ + ER F+ Sbjct: 176 VQGAKYRKAFSVEEMIPSMGQGALGVEMLKNHKHFATLQK-LNDEESAFCCHLEREFIKG 234 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 L+G C+ I A G + ++ +GK + G++ A ++ Sbjct: 235 LNGGCQIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDL 283 >gi|297690413|ref|XP_002822613.1| PREDICTED: porphobilinogen deaminase-like isoform 1 [Pongo abelii] Length = 361 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 99/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L ++ P II +ST GD+I + L++IG K LFT Sbjct: 21 IRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 79 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFAGKTLETLP 138 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181 SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 198 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 199 HNGVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 258 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 259 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 287 >gi|195490377|ref|XP_002093114.1| GE21148 [Drosophila yakuba] gi|194179215|gb|EDW92826.1| GE21148 [Drosophila yakuba] Length = 653 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 101/286 (35%), Positives = 153/286 (53%), Gaps = 18/286 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGG 60 ++K R+G+R S LAL +T+ + + K+ P I +ST GDR+ N +L +IG Sbjct: 4 QEKVIRVGSRKSELAL---IQTKHVIGRLQKLYPKQKFEIHTMSTFGDRVLNVSLPKIGE 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117 K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + + + Sbjct: 61 KSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHT 120 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAG 175 + L SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA AG Sbjct: 121 IASLPQGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQAG 180 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+ Sbjct: 181 LVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERS 240 Query: 236 FLAELDGSCKSAIAGFAYCKGST---------LYFYGIVLASDGKI 272 FL L G C + +A ++ KG L G V + DG I Sbjct: 241 FLKTLGGGCSAPVAVWSTLKGEPLNGNSQEVGLSLTGAVWSLDGAI 286 >gi|332208884|ref|XP_003253541.1| PREDICTED: porphobilinogen deaminase, partial [Nomascus leucogenys] Length = 332 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 99/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L ++ P II +ST GD+I + L++IG K LFT Sbjct: 21 IRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 79 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 138 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181 SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 139 EKSVVGTSSLRRAAQLQRKFRHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 198 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 199 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 258 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 259 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 287 >gi|322712674|gb|EFZ04247.1| porphobilinogen deaminase [Metarhizium anisopliae ARSEF 23] Length = 327 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 102/281 (36%), Positives = 147/281 (52%), Gaps = 12/281 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +GTR SPLA+A A +SL + P + I ++T GDR N L GG Sbjct: 1 MAPSTITVGTRKSPLAMAQAELVVASLQSI--FPSSSFPIHGMTTTGDRDQNTALYNFGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----- 115 KGL+T ++E+KL++ E+D VHS KDMPT L + A RED RDV + A Sbjct: 59 KGLWTTQLEEKLVARELDIVVHSLKDMPTTLPSDCTLGAVTKREDPRDVLVLKKALRDAN 118 Query: 116 --QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLA 172 ++L DL SVIGTSS+RR A L R + D RG I+TRL KL+ + + AI+LA Sbjct: 119 GYKTLADLPDGSVIGTSSIRRIAQLARRYPALRFKDVRGNIQTRLKKLDEDPELSAIVLA 178 Query: 173 YAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 AG+ R+ + I + L++++ + GQGA+ +E + +K I H+DT + Sbjct: 179 AAGLLRMDLGEHISQYLDVDNGGILHAVGQGALGVECRAGDEHVLRALKEIEHKDTLLAC 238 Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 ER+ + EL+G C I L V++ GK Sbjct: 239 LAERSLMRELEGGCSVPIGVETRWVDGKLRLRATVVSVTGK 279 >gi|297190129|ref|ZP_06907527.1| porphobilinogen deaminase 2 [Streptomyces pristinaespiralis ATCC 25486] gi|197721156|gb|EDY65064.1| porphobilinogen deaminase 2 [Streptomyces pristinaespiralis ATCC 25486] Length = 311 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 97/291 (33%), Positives = 143/291 (49%), Gaps = 6/291 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L +H P ++P+ T GD+ L+ + GKG FT Sbjct: 7 IRIVSRDSPMALAQVERVRAELAALH--PGIRTEVVPVKTTGDKWMG-DLSLVEGKGAFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPT--KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +A+L R+D+RD I +L +L Sbjct: 64 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTVFAAFLERDDVRDALIHPGGLTLDELPE 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSS+RR A L + + RG RL KL A A+LLA +G++R+ + Sbjct: 124 GARIGTSSVRRIAQLAVSHPHLECVPMRGNANRRLEKLAAGDADALLLAVSGLERIGRTD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI + L+ + P G G + ++ + + V + H T V ER FL L G Sbjct: 184 VITQTLSTDVMCPPIGAGVLALQCREGDSALIDTVSDLGHPGTHREVTAERMFLHVLQGH 243 Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 C S IAG+A + L V + DGK+ R D +G A Sbjct: 244 CNSPIAGYARSERNGELSLRAKVFSPDGKVILNAHEWAGRLDPATLGTSVA 294 >gi|86141058|ref|ZP_01059617.1| porphobilinogen deaminase [Leeuwenhoekiella blandensis MED217] gi|85833000|gb|EAQ51449.1| porphobilinogen deaminase [Leeuwenhoekiella blandensis MED217] Length = 305 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 89/267 (33%), Positives = 140/267 (52%), Gaps = 6/267 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LAL A + L ++ + +I + + GD I ++ L E+G G+ Sbjct: 3 KTIRIGTRDSELALWQAHTVQDQLENLG----YKTELISVKSTGDLILDKPLYELGITGI 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ ++ +I+G++D AVHS KD+PT+L G+ A LPR D+F+ ++ D Sbjct: 59 FTKTLDVAMINGDVDIAVHSMKDVPTQLPNGIVQGAVLPRAATEDIFVFKKDKNATDFTK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 I T SLRRKA L V+D RG + TRL K+ +N + A AG++R+ + Sbjct: 119 SVTIATGSLRRKAQWLNKYPKHQVVDLRGNVNTRLQKVADNDWAGAVFAKAGLERINLKP 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 E+L+ P+P QGA+ I N+ +E +N D + ER FL +L+G Sbjct: 179 ENHEVLDW--MIPAPAQGAMVIAVMDNDAFCKEACAKLNDADAALTTKVEREFLRKLEGG 236 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG 270 C + I A + ++F+G + + DG Sbjct: 237 CTAPIGAIAKIEDDHIHFHGALFSLDG 263 >gi|228472965|ref|ZP_04057722.1| hydroxymethylbilane synthase [Capnocytophaga gingivalis ATCC 33624] gi|228275547|gb|EEK14324.1| hydroxymethylbilane synthase [Capnocytophaga gingivalis ATCC 33624] Length = 315 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 96/277 (34%), Positives = 146/277 (52%), Gaps = 7/277 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK RIGTR S LAL A + ++ L + + ++P+ ++GD + L E+G G Sbjct: 9 KKTLRIGTRDSELALWQAKKVQTLLENFG----YTTSLVPVKSQGDLSLDIPLYEMGITG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT+ ++ ++ G ID AVHS KD+PT L KG+ A L R +++DV + Sbjct: 65 VFTKVLDVAMLQGSIDIAVHSMKDVPTSLPKGIVKGAVLTRANVQDVLVYKDGLDFLSQE 124 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + I T SLRRKA LR V + RG I TRL+KL+ + H + A A ++RL ++ Sbjct: 125 -QATIATGSLRRKAQWLRRYPTHQVENLRGNIATRLHKLHEHSWHGAIFAAAALERLAQD 183 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + L++E P+P QGAI ++P E + +IN ER FL L+G Sbjct: 184 HLQR--LSLEWMTPAPAQGAILAVAMDSDPYTLEALSLINDPKADTETQIERRFLKRLEG 241 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 C + I A +G TL F G + + DGK EV ++ Sbjct: 242 GCTAPIGAKATLEGDTLSFVGNLFSLDGKQAVEVRKS 278 >gi|20130425|ref|NP_612103.1| lethal (3) 02640 [Drosophila melanogaster] gi|7292071|gb|AAF47484.1| lethal (3) 02640 [Drosophila melanogaster] gi|77403925|gb|ABA81841.1| GH16723p [Drosophila melanogaster] gi|211938543|gb|ACJ13168.1| FI03834p [Drosophila melanogaster] gi|220951602|gb|ACL88344.1| l(3)02640-PA [synthetic construct] Length = 652 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 101/286 (35%), Positives = 153/286 (53%), Gaps = 18/286 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGG 60 ++K R+G+R S LAL +T+ + + K+ P I +ST GDR+ N +L +IG Sbjct: 4 QEKVIRVGSRKSELAL---IQTKHVIGRLQKLYPKQKFEIHTMSTFGDRVLNVSLPKIGE 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117 K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + + + Sbjct: 61 KSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHT 120 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAG 175 + L SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA AG Sbjct: 121 IASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQAG 180 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+ Sbjct: 181 LVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERS 240 Query: 236 FLAELDGSCKSAIAGFAYCKGST---------LYFYGIVLASDGKI 272 FL L G C + +A ++ KG L G V + DG I Sbjct: 241 FLKTLGGGCSAPVAVWSNLKGEPLNGNSQEVGLSLTGAVWSLDGAI 286 >gi|291528492|emb|CBK94078.1| porphobilinogen deaminase [Eubacterium rectale M104/1] Length = 338 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 98/277 (35%), Positives = 138/277 (49%), Gaps = 32/277 (11%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 + IGTR S LAL L + P + + + T GD + L +IG KG+F Sbjct: 3 YLIGTRGSKLALVQTDYVIDKLKRAY--PDDDFKAVIIKTTGDLEQKKALDKIGSKGIFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE +L+SG+I AVHS KDMP + GL + RED RDV + A SL +L + Sbjct: 61 KEIEDELLSGKIHMAVHSMKDMPDEPAAGLTFAKAWKREDPRDVLVLKNAASLDELPHGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL---------------NNN------ 164 VIGT S RRK LL+ R D+ V+ RG I+TRL KL NNN Sbjct: 121 VIGTGSKRRKYQLLKLRPDLKVVGIRGNIDTRLRKLYDGEIIYEEIADNTVNNNEIANEK 180 Query: 165 -------KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217 + I+LA AGIKR+ ++ I + + +D P+P QG + +E +N + Sbjct: 181 QNKYNEYRLDGIVLAAAGIKRIGRDSEITQYFSEDDMIPAPAQGTLALELRADNAELMAK 240 Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254 + ++ E T ER FL + G+C +A AYC Sbjct: 241 LDALSDEKTNLCAGIEREFLKRIGGNCHLPVA--AYC 275 >gi|332016383|gb|EGI57296.1| Porphobilinogen deaminase [Acromyrmex echinatior] Length = 358 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 103/273 (37%), Positives = 154/273 (56%), Gaps = 7/273 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+G+R S LAL L ++H P I+ ++TKGD+I +++L +IG K LFT Sbjct: 10 IRVGSRKSELALIQTKHVIQCLKEIH--PKKEFEIVTMNTKGDKILDKSLPKIGEKSLFT 67 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLA 122 EE+E L +G +D VHS KD+PT L G+ + A L RED RD + ++L L Sbjct: 68 EELELALENGSVDFVVHSLKDLPTILPVGMALGAILKREDPRDAVVMSKKFKDKTLSTLP 127 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLK 180 SVIGTSSLRR A LLR + + + RG + TRL KLN N AI+LA AG+KR+ Sbjct: 128 KDSVIGTSSLRRSAQLLRNMPHLKIENIRGNLNTRLKKLNDENGPYAAIILAAAGLKRMG 187 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++L +E+ + GQGA+ +E ++ K + +++ + + + CER+FL L Sbjct: 188 WEDKISQLLELEEALYAVGQGALGVECRESDWKIRSILEPLFDLEATLTCVCERSFLKTL 247 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 G C + +A + K + L G V + DG+ Sbjct: 248 GGGCSAPVAVSSSLKKNELTITGAVWSLDGQTL 280 >gi|88854547|ref|ZP_01129214.1| porphobilinogen deaminase [marine actinobacterium PHSC20C1] gi|88816355|gb|EAR26210.1| porphobilinogen deaminase [marine actinobacterium PHSC20C1] Length = 290 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 94/257 (36%), Positives = 139/257 (54%), Gaps = 4/257 (1%) Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99 IIP+ST+GDR T +L+ IGG+G+F + L++GE D VHS KD+PT + GL I+A Sbjct: 21 IIPISTQGDRSTE-SLSTIGGQGVFANALRDALLAGECDVVVHSLKDLPTAEVPGLTIAA 79 Query: 100 YLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159 R D RDV + +L+ L + +GT S RR+A L D+ V+D RG I++RL+ Sbjct: 80 VPKRADERDVVCARDGLTLETLPAGARVGTGSPRRQAQLRSLYPDLEVVDLRGNIDSRLD 139 Query: 160 KLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219 K+ + A++LA AG+ R + + E L I +P +PGQGA+ IET K L Sbjct: 140 KVTDGHLDAVILAAAGLARAGRSDAVTEHLGIAGWPTAPGQGALAIETRTGEEK---LAA 196 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 V++H+ + + ER LA LD C + + A L+ V A DG + S Sbjct: 197 VLDHKPSRTKTDAERYVLAFLDAGCSAPLGAHAVIDDGLLFLDARVYALDGSRYLTSSHA 256 Query: 280 GNRCDAINIGRDAAQYI 296 D + R+AAQ + Sbjct: 257 LYVNDVEDPAREAAQRV 273 >gi|332877010|ref|ZP_08444763.1| hydroxymethylbilane synthase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332685118|gb|EGJ57962.1| hydroxymethylbilane synthase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 290 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 96/268 (35%), Positives = 146/268 (54%), Gaps = 7/268 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 KP RIGTR S LAL A ET +++ P I+ + ++GD L E+G G+ Sbjct: 2 KPIRIGTRDSQLALWQA-ETVQYQLELLGYPTE---IVGIKSEGDLELTTPLYEMGVTGI 57 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ ++ L+ GEID AVHS KD+PT L G+ + A L R + D+ + S D + Sbjct: 58 FTKALDIALLKGEIDIAVHSMKDVPTLLPDGIAVGAVLERGNPHDILVYKGDVSDLDSRV 117 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + I TSSLRRKA L ++ + RG + TRL KL +N + A AG++R+ +K Sbjct: 118 -ATIATSSLRRKAQWLHRYPHHTIENLRGNVNTRLQKLADNPWDGAIFAAAGLERI--DK 174 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + ++ L ++ P+P QGAI + H +N Q ++ I+ T+ ERAFL L+G Sbjct: 175 LPEDYLVLDWMLPAPAQGAIMVLAHEDNVDLQGILLKIHDGKTYIETQVERAFLRALEGG 234 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGK 271 C + I +A G ++F G + + DGK Sbjct: 235 CTAPIGAYAEFDGEQVHFKGGLWSEDGK 262 >gi|195336557|ref|XP_002034902.1| GM14404 [Drosophila sechellia] gi|194127995|gb|EDW50038.1| GM14404 [Drosophila sechellia] Length = 651 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 101/286 (35%), Positives = 153/286 (53%), Gaps = 18/286 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGG 60 ++K R+G+R S LAL +T+ + + K+ P I +ST GDR+ N +L +IG Sbjct: 4 QEKVIRVGSRKSELAL---IQTKHVIGRLQKLYPKQKFEIHTMSTFGDRVLNVSLPKIGE 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117 K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + + + Sbjct: 61 KSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHT 120 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAG 175 + L SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA AG Sbjct: 121 IASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQAG 180 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+ Sbjct: 181 LLRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERS 240 Query: 236 FLAELDGSCKSAIAGFAYCKGST---------LYFYGIVLASDGKI 272 FL L G C + +A ++ KG L G V + DG I Sbjct: 241 FLKTLGGGCSAPVAVWSNLKGEPLNQNSQELGLSLTGAVWSLDGAI 286 >gi|195586907|ref|XP_002083209.1| GD13613 [Drosophila simulans] gi|194195218|gb|EDX08794.1| GD13613 [Drosophila simulans] Length = 651 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 101/286 (35%), Positives = 153/286 (53%), Gaps = 18/286 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGG 60 ++K R+G+R S LAL +T+ + + K+ P I +ST GDR+ N +L +IG Sbjct: 4 QEKVIRVGSRKSELAL---IQTKHVIGRLQKLYPKQKFEIHTMSTFGDRVLNVSLPKIGE 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117 K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + + + Sbjct: 61 KSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHT 120 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAG 175 + L SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA AG Sbjct: 121 IASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQAG 180 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+ Sbjct: 181 LVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERS 240 Query: 236 FLAELDGSCKSAIAGFAYCKGST---------LYFYGIVLASDGKI 272 FL L G C + +A ++ KG L G V + DG I Sbjct: 241 FLKTLGGGCSAPVAVWSNLKGEPLNGNSQEVGLSLTGAVWSLDGAI 286 >gi|89889812|ref|ZP_01201323.1| porphobilinogen deaminase [Flavobacteria bacterium BBFL7] gi|89518085|gb|EAS20741.1| porphobilinogen deaminase [Flavobacteria bacterium BBFL7] Length = 317 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 97/271 (35%), Positives = 148/271 (54%), Gaps = 13/271 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+ A +S L + + P+ ++GD + L E+G G+FT Sbjct: 5 IRIGTRDSQLAMWQATTVQSQLNAL----GFQTELAPVKSQGDLNLDEPLYEMGITGIFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + ++ L+ G+ID AVHS KD+PT+L KG+ +A L R +D+ + ++ + D A+ Sbjct: 61 KTLDVALVKGDIDIAVHSLKDVPTQLPKGMVQAAVLERASQKDILVYKSSFN-PDEAM-- 117 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKKEKV 184 I T SLRRKA L + V+D RG + TRL+KL++NK +A + A AG+ R+ Sbjct: 118 TIATGSLRRKAQWLNMYAQHHVVDLRGNVNTRLSKLHSNKDWNAAIFAKAGLDRIGLLSQ 177 Query: 185 IK-----EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 ++ E +++ F P+P QGAI I +N E V +NH T V+ ER FL E Sbjct: 178 LRGNYGFEYSDLDSFVPAPAQGAIMIAAMGHNTAVLEAVSQLNHAQTQRCVDIERRFLRE 237 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 L+G C + I A + + F G +L+ DG Sbjct: 238 LEGGCTAPIGAIAQVHDNKIDFTGCLLSIDG 268 >gi|307611613|emb|CBX01297.1| porphobilinogen deaminase HemC [Legionella pneumophila 130b] Length = 284 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 92/256 (35%), Positives = 141/256 (55%), Gaps = 5/256 (1%) Query: 28 MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDM 87 M V + P +I ++P+ T GDR L GGKGLF +E+E+ L+ D AVHS KDM Sbjct: 1 MLVKQWPNLSIELLPMITSGDRFLKDKLLSAGGKGLFVKELEEALLDKRADLAVHSTKDM 60 Query: 88 PTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISV 147 P +L GL ++A R++ D IS +SL L +++IGTSSLRR++ LL + ++ + Sbjct: 61 PAQLPDGLSLAAICKRDNPFDALISPQFKSLDALPKNAIIGTSSLRRQSQLLAYNPNLQI 120 Query: 148 IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIET 207 RG I TRL+KL + + AI+LA AG++R+ I +++ + P+ QGA+CIE Sbjct: 121 KTLRGNIHTRLSKLESGEYQAIILAAAGLERMGLTHHITQLIPDDIMLPTCAQGALCIEC 180 Query: 208 HVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST---LYFYGI 264 ++ + QEL+ +N + V+ ER A+L G+C A YC + L Sbjct: 181 RTDDLEIQELIHSLNDPISALCVHTERRVNAKLGGNCHIPFA--VYCTITAENLLLLRAK 238 Query: 265 VLASDGKIFHEVSRNG 280 VL DG + + G Sbjct: 239 VLNLDGSQMIDDEQQG 254 >gi|282865645|ref|ZP_06274696.1| porphobilinogen deaminase [Streptomyces sp. ACTE] gi|282559689|gb|EFB65240.1| porphobilinogen deaminase [Streptomyces sp. ACTE] Length = 328 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 97/306 (31%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 KP R+GTR S LA+A + + V ++ + ++ ++T GD ++ L +IGG G+ Sbjct: 13 KPLRLGTRRSKLAMAQSGMVADA---VREVTGRAVELVEITTYGD-VSREHLAQIGGTGV 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F + + L GE+D AVHS KD+PT +GL ++A RED RDV ++ + L Sbjct: 69 FVAALREALARGEVDFAVHSLKDLPTTQPEGLVLAAVPVREDPRDVLVARDGLTFAQLPS 128 Query: 124 HSVIGTSSLRRKALLLRW-RS---DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 + IGT S RR A L + RS D+ + RG ++TR+N + + A++LA AG+ RL Sbjct: 129 GARIGTGSPRRMAQLNAYARSHGLDMETVAIRGNVDTRINFVRTGELDAVVLAAAGLSRL 188 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + + L+ + P+PGQGA+ IE ++ + + ++ T +V ERA LA Sbjct: 189 GRTGEVTDFLSTDTVLPAPGQGALAIECAEDSTELAAALAELDDPHTRVAVTAERALLAA 248 Query: 240 LDGSCKSAIAGFA--YCKG---STLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGR 290 L+ C + + A G + L G+V ++DG ++S G + DA GR Sbjct: 249 LEAGCSAPVGALADLLADGQIVNELRLRGVVGSTDGTSLVQLSITGSVPTSHDDAAAFGR 308 Query: 291 DAAQYI 296 + A + Sbjct: 309 ELASEM 314 >gi|326329564|ref|ZP_08195886.1| hydroxymethylbilane synthase [Nocardioidaceae bacterium Broad-1] gi|325952560|gb|EGD44578.1| hydroxymethylbilane synthase [Nocardioidaceae bacterium Broad-1] Length = 336 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 95/302 (31%), Positives = 163/302 (53%), Gaps = 14/302 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLM-DVHKIPPHNIVIIPLSTKGDRI--TNRTLTEIGG 60 + R+GTR S LA+ T+S+L+ ++ + H + ++ + + GDR +N LT Sbjct: 2 RTLRLGTRRSQLAV-----TQSTLVAEMLRAQGHIVELVEIVSDGDRTQASNTPLTSANS 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + L + EID AVHS KD+PT +G+++ A LPRED RDV ++ +L + Sbjct: 57 TGVFVSALRDALHAKEIDLAVHSLKDLPTYPEEGIELVAILPREDPRDVIVARDGLTLGE 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S +GT S RR A + + + RG ++TR+ K+ + + A++LA AG+ R+ Sbjct: 117 LPPGSRVGTGSPRRVAQIKALGLGLELAGIRGNVDTRIGKVRSGEFDAVVLARAGLARID 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKA--QELVKVINHEDTWDSVNCERAFLA 238 + + E+L+ P+PGQGA+ +E + A ++++ ++ T +V ERA LA Sbjct: 177 RLDEVTEVLDPIQVLPAPGQGALAVECREGDADADVRKILTSLDDAPTRAAVEAERAVLA 236 Query: 239 ELDGSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 L+G C + I A +G L+ + L+ DG + +S +G DA +GR A+ Sbjct: 237 TLEGGCAAPIGTLADVVEGEEGPELWVRAVALSLDGSLSVRLSASGPLDDAAGVGRRLAE 296 Query: 295 YI 296 + Sbjct: 297 EM 298 >gi|296216375|ref|XP_002754553.1| PREDICTED: porphobilinogen deaminase [Callithrix jacchus] Length = 361 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 98/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L ++ P II +ST GD+I + L++IG K LFT Sbjct: 21 IRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 79 KELEHALERNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 138 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181 SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 198 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + +IL+ E+ + GQGA+ +E + ++V V++ +T ERAFL L+ Sbjct: 199 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDMVGVLHDPETLLRCIAERAFLRHLE 258 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 259 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 287 >gi|262067556|ref|ZP_06027168.1| hydroxymethylbilane synthase [Fusobacterium periodonticum ATCC 33693] gi|291378731|gb|EFE86249.1| hydroxymethylbilane synthase [Fusobacterium periodonticum ATCC 33693] Length = 302 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 104/271 (38%), Positives = 144/271 (53%), Gaps = 6/271 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60 KK +G+R S LALA A +++L + P + I + T GD+ +N +++ Sbjct: 2 KKNIIMGSRGSILALAQANLVKNNLEANY--PELSFEIKEIVTSGDKDLKSNWENSDVSL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAVSPKGLICGAIPDREDPRDVLVSKNG-FLVT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 LPKGAKIGTSSLRRAMNLKAVRPDFEIKHLRGNIHTRLKKLEIEDYDAIVLAAAGLKRTG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E LN E FPP+P QG + I+ N+ + +E++K I++E V ER F Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKEILKSIHNEAVAKIVEIEREFSKIF 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 DG C + + ++ G + F V + +GK Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTA-VYSDEGK 268 >gi|260494552|ref|ZP_05814682.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_33] gi|260197714|gb|EEW95231.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_33] Length = 302 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 101/264 (38%), Positives = 137/264 (51%), Gaps = 5/264 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60 KK IG+R S LALA A + L + P I + T GD+ +N +++ Sbjct: 2 KKNIIIGSRGSILALAQADFIKDKLQINY--PNLTFTIKEIVTSGDKDLKSNWENSDVSL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE+ L+ G+ID AVHS KDMP KGL A RED RDV +S L Sbjct: 60 KSFFTKEIEQGLLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDARDVLVSKNG-FLVT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 LPQGAKIGTSSLRRAMNLKAIRPDFEIKHLRGNIHTRLKKLEIEDYDAIVLAAAGLKRTG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E L+ E FPP+P QG + I+ N+ + +E++K I++E+ V ER F Sbjct: 179 MTDKITEYLSGEVFPPAPAQGVLYIQCRENDKEIKEILKTIHNENVAKIVEIEREFSKIF 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGI 264 DG C + + ++ G + F + Sbjct: 239 DGGCHTPMGCYSQVNGDKIKFTAV 262 >gi|20149500|ref|NP_000181.2| porphobilinogen deaminase isoform 1 [Homo sapiens] gi|1170217|sp|P08397|HEM3_HUMAN RecName: Full=Porphobilinogen deaminase; Short=PBG-D; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|12653497|gb|AAH00520.1| Hydroxymethylbilane synthase [Homo sapiens] gi|14198180|gb|AAH08149.1| Hydroxymethylbilane synthase [Homo sapiens] gi|17939638|gb|AAH19323.1| Hydroxymethylbilane synthase [Homo sapiens] gi|119587851|gb|EAW67447.1| hydroxymethylbilane synthase, isoform CRA_a [Homo sapiens] gi|158261573|dbj|BAF82964.1| unnamed protein product [Homo sapiens] gi|312152370|gb|ADQ32697.1| hydroxymethylbilane synthase [synthetic construct] Length = 361 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 99/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L + P II +ST GD+I + L++IG K LFT Sbjct: 21 IRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 79 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 138 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181 SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 198 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 199 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 258 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 259 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 287 >gi|208435725|pdb|3ECR|A Chain A, Structure Of Human Porphobilinogen Deaminase gi|208435726|pdb|3ECR|B Chain B, Structure Of Human Porphobilinogen Deaminase Length = 364 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 99/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L + P II +ST GD+I + L++IG K LFT Sbjct: 24 IRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 81 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 82 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 141 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181 SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 142 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 201 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 202 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 261 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 262 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 290 >gi|312375045|gb|EFR22490.1| hypothetical protein AND_15185 [Anopheles darlingi] Length = 638 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 94/253 (37%), Positives = 144/253 (56%), Gaps = 9/253 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVII-PLSTKGDRITNRTLTEIGGK 61 KK R+G+R S LAL +T+ + + K+ P + I ++T GDR+ N++L +IG K Sbjct: 10 KKTIRVGSRKSELALT---QTKHVIARLQKLNPDVVYEIHTMTTVGDRVLNKSLPKIGEK 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118 LFT+++E L +G +D VHS KD+PT L G+ I A L RED RD + H +L Sbjct: 67 SLFTKDLEDALRTGGVDFVVHSLKDLPTALPVGMAIGAVLEREDPRDALVLNERHRGSTL 126 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176 L S+IGTSSLRR A L R+ ++V D RG + TRL KL+ + K I+LA AG+ Sbjct: 127 ASLPRGSLIGTSSLRRSAQLARYYRHLNVCDIRGNLNTRLAKLDADASKFAGIILAQAGL 186 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ + I +++ + + GQGA+ +E N+ ++ + H +T + ER+F Sbjct: 187 VRMGWNERIDQVIEPSEILYAVGQGALAVECRSNDEYILGMLAKLCHLETQCRILTERSF 246 Query: 237 LAELDGSCKSAIA 249 L L G C + +A Sbjct: 247 LRTLGGGCSAPVA 259 >gi|297563292|ref|YP_003682266.1| porphobilinogen deaminase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847740|gb|ADH69760.1| porphobilinogen deaminase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 335 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 98/304 (32%), Positives = 152/304 (50%), Gaps = 19/304 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPL---STKGDRITNRTLTEIGGK 61 P R+GTR S +A T S M I +I L ++ GD +T LT++GG Sbjct: 20 PARLGTRRSTMA------TSQSRMVADAITARTGRVIELELITSFGD-VTKAHLTQLGGT 72 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F + +L +G +D AVHS KD+PT +GL ++A R+D RD + DL Sbjct: 73 GVFVNALRDELHAGTVDFAVHSLKDLPTTPAEGLVLAAIPERDDPRDALCARDGLKFADL 132 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGT S RR A L R D+ + RG ETRL K+ + + A++LAYAG+ R+ + Sbjct: 133 PAGARIGTGSPRRVAQLAALRPDLVYVPIRGNAETRLGKVASGELDAVVLAYAGLGRVGR 192 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ-ELVKVINHEDTWDSVNCERAFLAEL 240 + + E+ E P+PGQGA+ +E V + ++H T V ER L+EL Sbjct: 193 TEDVTEVFEPEQMLPAPGQGALAVECSVERLDGDLAYLASVDHPATRAEVVAERTVLSEL 252 Query: 241 DGSCKSAIAGFAYCKGST--LYFYGIVLASDG------KIFHEVSRNGNRCDAINIGRDA 292 + C + + +A T L V+A+DG + +++ G+ A +GRD Sbjct: 253 EAGCAAPVGAYAQYDAETGRLRLRAAVVATDGAEAVRRERAADLASPGDLAAATALGRDL 312 Query: 293 AQYI 296 A+ + Sbjct: 313 ARQM 316 >gi|254303623|ref|ZP_04970981.1| hydroxymethylbilane synthase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323815|gb|EDK89065.1| hydroxymethylbilane synthase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 301 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 105/271 (38%), Positives = 140/271 (51%), Gaps = 6/271 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60 KK IG+R S LALA A + L P I + T GD+ +N ++I Sbjct: 2 KKNIIIGSRGSILALAQANLVKEKLE--LNYPNLTFEIKEIVTSGDKDLKSNWENSDISL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 LPQGAKVGTSSLRRAMNLKAVRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRTG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E LN E FPP+P QG + I+ N+ + +E++K I++E V ER F Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKEILKSIHNEAIAKIVEIEREFSKIF 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 DG C + + ++ G + F V + +GK Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTA-VYSDEGK 268 >gi|35307|emb|CAA27801.1| unnamed protein product [Homo sapiens] Length = 344 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 99/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L + P II +ST GD+I + L++IG K LFT Sbjct: 4 IRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 62 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181 SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 122 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 182 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 242 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 270 >gi|294782423|ref|ZP_06747749.1| hydroxymethylbilane synthase [Fusobacterium sp. 1_1_41FAA] gi|294481064|gb|EFG28839.1| hydroxymethylbilane synthase [Fusobacterium sp. 1_1_41FAA] Length = 301 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 106/271 (39%), Positives = 140/271 (51%), Gaps = 6/271 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60 KK IGTR S LALA A ++SL + P I + T GD+ +N + Sbjct: 2 KKNIIIGTRGSILALAQANLVKTSLEANY--PDLTFEIKEIVTSGDKDLKSNWENSNASL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV IS L Sbjct: 60 KSFFTKEIEQELLDGQIDIAVHSMKDMPAVSPKGLICGAIPDREDARDVLISKNG-FLVT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 LPQGAKIGTSSLRRVMNLKAIRPDFEIKHLRGNIHTRLKKLETEDYDAIILAAAGLKRTG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E L+ E FPP+P QG + I+ N+ + + ++K I++E+ V ER F Sbjct: 179 MADKITEYLSGEAFPPAPAQGVLYIQCRENDEEIKGILKSIHNENIAKIVEIEREFSKIF 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 DG C + + ++ + F G + DGK Sbjct: 239 DGGCHTPMGCYSQVDEDKIKFIG-AYSHDGK 268 >gi|66933009|ref|NP_001019553.1| porphobilinogen deaminase isoform 2 [Homo sapiens] Length = 344 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 99/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L + P II +ST GD+I + L++IG K LFT Sbjct: 4 IRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 62 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181 SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 122 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 182 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 242 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 270 >gi|332668763|ref|YP_004451770.1| porphobilinogen deaminase [Cellulomonas fimi ATCC 484] gi|332337800|gb|AEE44383.1| porphobilinogen deaminase [Cellulomonas fimi ATCC 484] Length = 326 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 93/277 (33%), Positives = 140/277 (50%), Gaps = 16/277 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL +L + I + + T GDR+T +L +GG G+F Sbjct: 5 VRIGTRASTLALTQTGHVADALAAHGGL---AIETVRVRTDGDRLTG-SLASLGGAGVFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + L+ G D AVHS KD+PT GL ++A PRED RD + +L DL + Sbjct: 61 TALRDALLDGRCDVAVHSLKDLPTADAPGLVLAAVPPREDPRDALCARDGLTLADLPRGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-----HAILLAYAGIKRLK 180 +GT S RR A LL R D+ V+D RG ++TRL ++ + A++LA AG+ R+ Sbjct: 121 RVGTGSPRRAAQLLAARPDLDVVDIRGNVDTRLGRVAGSPTGPGDLDAVVLARAGLARIG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETH---VNNPKAQEL---VKVINHEDTWDSVNCER 234 + + + E+ + P+PGQGA+ +ET + A L + ++ T +V ER Sbjct: 181 RLEAVTELFGPDVMLPAPGQGALAVETRAAGLTTDLAGPLHAALAALDDRPTRLAVLAER 240 Query: 235 AFLAELDGSCKSAIAGFAYCKG-STLYFYGIVLASDG 270 A LA L+ C + + A TL +V+ +DG Sbjct: 241 ALLARLEAGCAAPVGTLATLDADGTLTLDAVVVRTDG 277 >gi|148222555|ref|NP_001089699.1| hydroxymethylbilane synthase [Xenopus laevis] gi|76780331|gb|AAI06358.1| MGC130905 protein [Xenopus laevis] Length = 351 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 100/273 (36%), Positives = 142/273 (52%), Gaps = 8/273 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSL-MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K R+GTR S LA +T S + M + + I+ +ST GD+I + L++IG K Sbjct: 8 KHVIRVGTRKSQLA---RIQTDSVVEMLSKRFSSTHFEIVAMSTTGDKILDTALSKIGEK 64 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H +L Sbjct: 65 SLFTKELENALEKNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPYDAVVFHPKRFGNTL 124 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIK 177 L SVIGTSSLRR A L + + D RG + TRL KL+ + AI+LA AG++ Sbjct: 125 STLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRLRKLDEQEDFSAIILAAAGLR 184 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ E I +IL ++ + GQGA+ +E + +V + +T ERAF+ Sbjct: 185 RMGWENRIGQILTSDECLYAVGQGALAVEVRAKDQDILSMVSALQDPETVLRCVAERAFM 244 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 +L+G C +A K S LY G V + DG Sbjct: 245 KKLEGGCSVPVAVSTVVKDSQLYLTGAVYSLDG 277 >gi|254431329|ref|ZP_05045032.1| porphobilinogen deaminase [Cyanobium sp. PCC 7001] gi|197625782|gb|EDY38341.1| porphobilinogen deaminase [Cyanobium sp. PCC 7001] Length = 321 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 106/304 (34%), Positives = 150/304 (49%), Gaps = 9/304 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ R L H I I ++T+GD+I + L +IG Sbjct: 1 MAGSTLRIASRRSQLAMVQTHWVRDELAKAHD--DLTITIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + H K Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVHAKHRDKT 118 Query: 121 LAL---HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 LA SV+GTSSLRR A L ++ D RG + TRL KL++ + ++LA AG+ Sbjct: 119 LATLPEGSVVGTSSLRRLAQLRHHFPHLTFKDVRGNVITRLEKLDSGEFDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I E+++ + GQGA+ IE + E +KV+ H T ERAFL Sbjct: 179 RLGLGDRIHELIDPSISLHAVGQGALGIECREGDEPVLEQIKVLEHLPTARRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGS----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 EL+G C+ I G+ L G+V + DG+ G + D IG A Sbjct: 239 RELEGGCQVPIGVNTRFDGAGESGELVLTGMVASLDGQRLIRDEARGPQDDPEAIGIALA 298 Query: 294 QYIR 297 + +R Sbjct: 299 RSLR 302 >gi|237744690|ref|ZP_04575171.1| porphobilinogen deaminase [Fusobacterium sp. 7_1] gi|229431919|gb|EEO42131.1| porphobilinogen deaminase [Fusobacterium sp. 7_1] Length = 302 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 105/276 (38%), Positives = 143/276 (51%), Gaps = 6/276 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60 KK IG+R S LALA A + L + P I + T GD+ +N +++ Sbjct: 2 KKNIIIGSRGSILALAQANLIKDKLQINY--PNLTFTIKEIVTSGDKDLKSNWENSDVSL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 LPQGAKIGTSSLRRVMNLKAIRPDFEIKHLRGNIHTRLKKLEIEDYDAIVLAAAGLKRTG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E L+ E FPP+P QG + I+ N+ + +E++K I++E+ V ER F Sbjct: 179 MTDKITEYLSGEVFPPAPAQGVLYIQCRENDEEIKEILKSIHNENIAKIVEIEREFSKIF 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV 276 DG C + + ++ G + F V + +GK V Sbjct: 239 DGGCHTPMGCYSQVNGDKIKFTA-VYSDEGKQIRAV 273 >gi|296108387|ref|YP_003620088.1| hydroxymethylbilane synthase [Legionella pneumophila 2300/99 Alcoy] gi|295650289|gb|ADG26136.1| hydroxymethylbilane synthase [Legionella pneumophila 2300/99 Alcoy] Length = 284 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 93/261 (35%), Positives = 143/261 (54%), Gaps = 5/261 (1%) Query: 28 MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDM 87 M V + P +I ++P+ T GDR L GGKGLF +E+E+ L+ D AVHS KDM Sbjct: 1 MLVKQWPNLSIELLPMITSGDRFLKDKLLSAGGKGLFVKELEEALLDKRADLAVHSTKDM 60 Query: 88 PTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISV 147 P +L GL ++A R++ D IS +SL L +++IGTSSLRR++ LL + ++ + Sbjct: 61 PAQLPDGLLLAAICKRDNPFDALISPQFKSLDALPKNAIIGTSSLRRQSQLLAYNPNLQI 120 Query: 148 IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIET 207 RG I TRL+KL + + AI+LA AG++R+ I +++ + P+ QGA+CIE Sbjct: 121 KTLRGNIHTRLSKLESGEYQAIILAAAGLERMGLAHHITQLIPDDIMLPTCAQGALCIEC 180 Query: 208 HVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC---KGSTLYFYGI 264 ++ + QEL+ +N + V+ ER A+L G+C A YC + L Sbjct: 181 RTDDLEIQELIHGLNDPISALCVHTERRVNAKLGGNCHIPFA--VYCTITEEKRLLLRAK 238 Query: 265 VLASDGKIFHEVSRNGNRCDA 285 VL DG + + G +A Sbjct: 239 VLNMDGSQMIDDEQQGKIAEA 259 >gi|171914695|ref|ZP_02930165.1| Hydroxymethylbilane synthase [Verrucomicrobium spinosum DSM 4136] Length = 318 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 101/270 (37%), Positives = 142/270 (52%), Gaps = 18/270 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG-----G 60 R+GTR S LAL A ++L H P + ++T GD+ + +E Sbjct: 9 LRLGTRGSELALRQAEMVEAALHAAH--PYLRVERKVIATTGDKRPDLRFSEFTEGDRLD 66 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG+FT+E+E L SGEID AVHS KD+PT L + I+ LPR I DV IS +L Sbjct: 67 KGIFTKELEIALASGEIDIAVHSLKDVPTVLDEKFFIAGVLPRAPIEDVLISREGYTLAT 126 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNKAHAILLAYAGIKRL 179 L + +GTSS+RR L + ++ RG + TR+ KL + AILLA AG++RL Sbjct: 127 LPAGAKVGTSSVRRIRQLQWLNPGVECVEIRGNVPTRIRKLFAPSDLDAILLARAGLERL 186 Query: 180 K---KEKVIKE-------ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 E V+ + IL+ E+F P+ GQGAI IE V++ E +K INHE+T+ Sbjct: 187 SLLDGEHVVVDGQPLHAVILDCEEFLPAAGQGAIGIEARVDDAHTLEFLKAINHEETYAR 246 Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTL 259 V ER FL L C++ I + + L Sbjct: 247 VTAEREFLHILKAGCQTPIGAHTFLENGVL 276 >gi|54020779|ref|NP_001005635.1| hydroxymethylbilane synthase [Xenopus (Silurana) tropicalis] gi|49250823|gb|AAH74624.1| hydroxymethylbilane synthase [Xenopus (Silurana) tropicalis] Length = 351 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 100/273 (36%), Positives = 142/273 (52%), Gaps = 8/273 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSL-MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K R+GTR S LA +T S + M + P + I+ +ST GD+I + L++IG K Sbjct: 8 KHVIRVGTRKSQLA---RIQTDSVVEMLSKRFPSTHFDIVAMSTTGDKILDTALSKIGEK 64 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H +L Sbjct: 65 SLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPYDAVVFHPKRYGNTL 124 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIK 177 L SVIGTSSLRR A L + + D RG + TR+ KL+ + AI+LA AG++ Sbjct: 125 STLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRMKKLDEKEDFSAIILAAAGLR 184 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + I +IL ++ + GQGA+ IE + +V + +T ERAF+ Sbjct: 185 RMGWKNRIGQILTSDECLYAVGQGALAIEVRAKDQDILSMVSALQDPETVLRCIAERAFM 244 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 L+G C +A K S LY G V + DG Sbjct: 245 KRLEGGCSVPVAVNTVVKDSQLYLTGAVYSLDG 277 >gi|308177931|ref|YP_003917337.1| hydroxymethylbilane synthase [Arthrobacter arilaitensis Re117] gi|307745394|emb|CBT76366.1| hydroxymethylbilane synthase [Arthrobacter arilaitensis Re117] Length = 324 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 102/318 (32%), Positives = 147/318 (46%), Gaps = 31/318 (9%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + FR+GTR S LA L + + +++ T+GD +T +L +GG G Sbjct: 2 SESFRVGTRGSALATTQTGWAAQKLAGISGLDVETVLV---KTEGDVVTG-SLATLGGTG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F + + L+ D AVHS KD+PT +GL ++A RED+RD S + L L Sbjct: 58 VFAAALRQHLLDAGCDLAVHSLKDLPTAQPEGLVLAAIPAREDVRDALCSRDSLGLDQLP 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL---------------NNNKAH 167 + IGT S RR A LL +RSD ++D RG + TRL ++ Sbjct: 118 HGAKIGTGSPRRAAQLLAYRSDFEIVDIRGNVPTRLGRVKGVGKTLDDGSVGRSTQGDLD 177 Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED-- 225 A++LA AG++RL E I E L+ P+PGQGA+ +ET Q L ++ D Sbjct: 178 AVILAAAGMRRLGLEDHITEYLDPSIMLPAPGQGALALETRSAGSGHQALDAALSQFDDA 237 Query: 226 -TWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR-- 282 T V ERA L+ L+ C + I A+ G L + DG E R R Sbjct: 238 HTRMQVEAERALLSTLEAGCAAPIGALAHIDGDDLVLEAVACNPDGS---ETMRRSARIA 294 Query: 283 CD----AINIGRDAAQYI 296 C A +GR AQ + Sbjct: 295 CSTTDAAQQLGRSLAQSM 312 >gi|120401860|ref|YP_951689.1| porphobilinogen deaminase [Mycobacterium vanbaalenii PYR-1] gi|158513128|sp|A1T3D3|HEM3_MYCVP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|119954678|gb|ABM11683.1| hydroxymethylbilane synthase [Mycobacterium vanbaalenii PYR-1] Length = 312 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 89/275 (32%), Positives = 142/275 (51%), Gaps = 13/275 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H+ ++ +ST+GD+ + + EIG G+FT Sbjct: 2 IRIGTRGSLLATTQAGTVRDALIAAG----HDAELVIVSTEGDQRADAPIAEIG-VGVFT 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + G +D AVHS KD+PT I+A RED RD ++ L +L S Sbjct: 57 AALREAIADGLVDAAVHSYKDLPTAPDPRFMIAATPVREDARDALVARDGLVLGELPAGS 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS RR A L + + RG ++TRLN++++ + AI++A AG+ R+ + + Sbjct: 117 VIGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGELDAIVVARAGLARIGRLDAV 176 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ +E + +++ ++ DT ++ ER LAEL+ C Sbjct: 177 TEALEPVQMLPAPAQGALAVECRAGDTALAQVLSQLDDADTRAAITAERTLLAELEAGCS 236 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 + + A S + DG++F E+S G Sbjct: 237 APVGAIAEVVES--------IDEDGRVFEELSLRG 263 >gi|288932129|ref|YP_003436189.1| porphobilinogen deaminase [Ferroglobus placidus DSM 10642] gi|288894377|gb|ADC65914.1| porphobilinogen deaminase [Ferroglobus placidus DSM 10642] Length = 292 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 102/294 (34%), Positives = 154/294 (52%), Gaps = 13/294 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LALA A + + L + + + + T GD + ++ L E G G F Sbjct: 7 IGSRGSKLALAQAEKVKKLLEE----RDFEVEVKVIKTHGDIMKDKPLHEFKGMGAFVRA 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I++ L GEID AVHS KD+P++ ++G I+A L RE D FIS +++ + S I Sbjct: 63 IDEALKRGEIDLAVHSYKDVPSQRVEGTVIAAVLERESACDAFISREGLKFEEMPVASKI 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK- 186 GTSSLRR+A + + R D+ V + RG ++TRL KL I++A AG+ RL +K I+ Sbjct: 123 GTSSLRRRAFVKKLRKDLEVENLRGNLDTRLRKLREGFYDGIIVAEAGLIRLGLDKEIEY 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E LN E F PS QG I + + N EL +NHE T + ERA L EL C Sbjct: 183 ERLNPEVFVPSANQGVIAVASRENEA---ELFSFLNHEKTRLETDVERAVLRELGIGCAI 239 Query: 247 AIAGFAYCKGSTLYFYGIVLASDG----KIFHEVSRNGNRCDAINIGRDAAQYI 296 +A +G I L+ +G ++ ++S+ +A+ I ++ +I Sbjct: 240 PAGIYAKAEGKVRLIVEI-LSEEGEKSVRVDEKLSKENAVEEAVEIAKNLKSFI 292 >gi|9971935|gb|AAG10497.1|AF279106_59 predicted porphobilinogen deaminase [uncultured marine gamma proteobacterium EBAC31A08] Length = 303 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 100/272 (36%), Positives = 146/272 (53%), Gaps = 6/272 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LA+ A L+ KI + ++P++++GD+ T++ L EIGGKGLF Sbjct: 3 IRIATRQSELAMYQAKFVADELL--AKINNIKVELVPMTSEGDQ-TDKPLHEIGGKGLFI 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E L + E D AVHS KD+P KL +I + RE D+ +S +S + A +S Sbjct: 60 STLESSLEADEADIAVHSLKDVPAKLDPKFKIISVFSRESPEDLLLSKDGKSFSEFARNS 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTS RRKA + R DI I RG I TR+ KLN+ +++A A IKRL ++ Sbjct: 120 TIGTSGPRRKAQINNLRPDIKTIPVRGNIATRIKKLNDGLFDGLVVAKAAIKRLGLKQNS 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E +IE+ PS QG I IE + EL++ I + ER+F+A ++G+C Sbjct: 180 YE-FSIEEMLPSASQGYIAIECLSDKKDIIELLENIGDPKELILASAERSFVAAMEGTCL 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG--KIFHE 275 S IA K + G +L+ +G KI+ E Sbjct: 239 SPIAILCEDKNGQIKISGKILSYEGNEKIYKE 270 >gi|34762659|ref|ZP_00143651.1| Porphobilinogen deaminase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887680|gb|EAA24757.1| Porphobilinogen deaminase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 302 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 101/266 (37%), Positives = 138/266 (51%), Gaps = 5/266 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60 KK IG+R S LALA A + L + P I + T GD+ +N ++I Sbjct: 2 KKNIIIGSRGSILALAQANLIKDKLQINY--PNLTFTIKEIVTSGDKDLKSNWENSDISL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDARDVLVSKNG-FLVT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 LPQGAKVGTSSLRRAMNLKAIRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRTG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E LN E FPP+P QG + I+ N+ + ++++K I+++ V ER F Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKKILKSIHNKAVAKIVEIEREFSKIF 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVL 266 DG C + + ++ G + F + L Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTAVYL 264 >gi|163784391|ref|ZP_02179282.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1] gi|159880338|gb|EDP73951.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1] Length = 185 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 83/185 (44%), Positives = 115/185 (62%), Gaps = 2/185 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A L P + +I ++TKGD+I + L ++GGKGLF Sbjct: 3 IRIGTRKSKLALWQANFVAEQLK--KHFPELEVELIKITTKGDKILDVPLAKVGGKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ ++ EID AVHS KD+PT +GL + A RED RD F+S SLK+L + Sbjct: 61 KEIEEAMLRNEIDIAVHSLKDVPTYFPEGLGLVAITKREDPRDAFLSVKYSSLKELPEGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRRK L R D+ + D RG ++TR+ KL + A++LAYAG+KRL E + Sbjct: 121 VVGTSSLRRKVQLKINRPDLQIKDLRGNVDTRIRKLEEGQYDAVILAYAGLKRLGLEDKV 180 Query: 186 KEILN 190 K++ + Sbjct: 181 KQVFS 185 >gi|227508197|ref|ZP_03938246.1| porphobilinogen deaminase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227192426|gb|EEI72493.1| porphobilinogen deaminase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 303 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 101/279 (36%), Positives = 143/279 (51%), Gaps = 4/279 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K F +GTR S LA+ +L + + P + ++T+GDR +L +IGGKG Sbjct: 2 KPEFVVGTRQSKLAMRQTNLVVDALKE--RFPKIIFKVEKITTQGDRNRKDSLRKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKDL 121 +F +EIE++L ID AVHS KD+ L K L I R+ D IS S + L Sbjct: 60 IFVKEIEQRLTDKRIDFAVHSLKDVMPSLPKNLIIGGVPKRDSPFDCLISTKPFSDIDQL 119 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSS RR+ R D+ ++ RG +++R+ KL + I+LA AG+ RL Sbjct: 120 PKGARIGTSSSRRQGQFSHLRPDVEIVSIRGNVDSRIQKLQRDHLDGIILAEAGLNRLGV 179 Query: 182 EKVIKEILNIE-DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + L+++ D P+ GQGAI IE ++ L+K I DT SV ER FL L Sbjct: 180 DLTGLYRLSLKNDLLPAAGQGAIGIECRADDHDTLALLKQIEDADTRQSVTIERDFLRRL 239 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 GSC I FA + F G+V + DGKIF S+ Sbjct: 240 GGSCNFPIGAFASQTSMGVRFDGLVASIDGKIFFSKSKT 278 >gi|73955044|ref|XP_546491.2| PREDICTED: similar to Porphobilinogen deaminase (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) (PBG-D) [Canis familiaris] Length = 361 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 98/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L ++ P I+ +ST GD+I + L++IG K LFT Sbjct: 21 IRVGTRKSQLARIQTDSVVAMLKALY--PGLQFEIVAMSTTGDKILDTALSKIGEKSLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 79 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLETLP 138 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181 SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDELQEFSAIILAAAGLQRMGW 198 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 199 QHRVGQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIAERAFLRHLE 258 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 259 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 287 >gi|15678894|ref|NP_276011.1| porphobilinogen deaminase [Methanothermobacter thermautotrophicus str. Delta H] gi|11386772|sp|O26960|HEM3_METTH RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|2621967|gb|AAB85372.1| porphobilinogen deaminase [Methanothermobacter thermautotrophicus str. Delta H] Length = 289 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 84/250 (33%), Positives = 138/250 (55%), Gaps = 3/250 (1%) Query: 47 GDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI 106 GDRI + L + +GLFT E++ +++ E+D AVHS KD+P+ L L I+A PRE Sbjct: 39 GDRIRDSQLYSMDSRGLFTRELDMAVLNEEVDLAVHSLKDVPSDLDPDLAIAAVPPRESP 98 Query: 107 RDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA 166 +V +S +DL S +GTSSLRR+A + + + RG I+TR+ K+ + + Sbjct: 99 AEVLVSRL--DWEDLPQGSKLGTSSLRREAFCNHHQKNFKMEPLRGNIDTRIRKVMDGEV 156 Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226 HA ++A AG+KRL E+ IK +E F P+ GQGA+ + T ++ + + I H + Sbjct: 157 HATIMAEAGLKRLGLEEHIKRRFPVEYFTPAAGQGALAVITRADSELISSIGR-ITHHPS 215 Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286 V E+ L EL C+ + G+ L Y ++L +G++ +V+ G +A Sbjct: 216 LQEVTAEKTLLRELGAGCQCPLGVIGRATGNQLTLYAVLLTREGEMLRKVTVRGPLAEAE 275 Query: 287 NIGRDAAQYI 296 +IG+ AA+ + Sbjct: 276 DIGKKAAKEM 285 >gi|320010120|gb|ADW04970.1| porphobilinogen deaminase [Streptomyces flavogriseus ATCC 33331] Length = 328 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 96/302 (31%), Positives = 159/302 (52%), Gaps = 17/302 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + + V ++ + ++ ++T GD I+ L +IGG G+F Sbjct: 14 PLRLGTRRSKLAMAQSGMVADA---VREVTGRAVELVEITTYGD-ISREHLAQIGGTGVF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L+SGE+D AVHS KD+PT +GL ++A PRED RD ++ + L Sbjct: 70 VAALREALLSGEVDFAVHSLKDLPTTQPEGLVLAAVPPREDPRDALVARDGLTFGQLPAG 129 Query: 125 SVIGTSSLRRKALLLRW-RS---DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + IGT S RR A L + RS DI + RG ++TR+ + + + A++LA AG+ RL Sbjct: 130 ARIGTGSPRRMAQLNAYARSHGLDIETVAIRGNVDTRIGFVRSGELDAVVLAAAGLSRLG 189 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + + L ++ P+PGQGA+ +E ++ + ++ T +V ERA L L Sbjct: 190 RTDEVTDFLPVDTVLPAPGQGALAVECAESSADLAAALAELDDPYTRIAVTAERALLNAL 249 Query: 241 DGSCKSAIAGFA--YCKGST---LYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRD 291 + C + + A +G L G+V ++DG ++S G + DA +GR+ Sbjct: 250 EAGCSAPVGALADLLAEGQVVNELRLRGVVGSTDGTSLVQLSITGPVPTSHDDAAALGRE 309 Query: 292 AA 293 A Sbjct: 310 LA 311 >gi|33861052|ref|NP_892613.1| porphobilinogen deaminase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|39931394|sp|Q7V2I1|HEM3_PROMP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|33639784|emb|CAE18954.1| Porphobilinogen deaminase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 316 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 101/303 (33%), Positives = 158/303 (52%), Gaps = 9/303 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +I +R S LA+ + L IP + I ++T+GD+I + L +IG Sbjct: 1 MTKFKLKIASRRSKLAMVQTLWVKEQLE--KNIPDLEVSIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---S 117 KGLFT+E+E +++ G D AVHS KD+PT L GL + RED D + + Sbjct: 59 KGLFTKELEAQMLVGHADIAVHSLKDLPTNLPDGLTLGCITKREDPSDALVVNKKNKIYQ 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L S++GTSSLRR A L + D RG + TR+ KL++ + I+LA AG+K Sbjct: 119 LESLPPGSIVGTSSLRRLAQLRYKFPHLDFKDIRGNVITRIEKLDSGEFDCIILAAAGLK 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC--ERA 235 RL E + +I+ E + GQGA+ IE ++ + +++ V+ ED S C ER+ Sbjct: 179 RLGFESRVHQIIPNEISLHAVGQGALGIECKSDDKEVLKIISVL--EDKVSSQRCLAERS 236 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 FL EL+G C+ I + + + G+V + DGK + GN +G+ A+ Sbjct: 237 FLRELEGGCQVPIGVNSSIQNDEIALIGMVASIDGKRLIKNESIGNIKYPEEVGKKLAEK 296 Query: 296 IRF 298 ++ Sbjct: 297 LKL 299 >gi|303239240|ref|ZP_07325769.1| porphobilinogen deaminase [Acetivibrio cellulolyticus CD2] gi|302593285|gb|EFL63004.1| porphobilinogen deaminase [Acetivibrio cellulolyticus CD2] Length = 293 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 99/296 (33%), Positives = 155/296 (52%), Gaps = 13/296 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNI--VIIPLSTKGDRITNRTLTEIGGK 61 K R+G+R S LA+ + +MD K NI +I + T GD+I + TL +IGGK Sbjct: 2 KTIRVGSRDSKLAIIQS----QMVMDAIKSYDSNIKTELITMKTTGDKILDVTLDKIGGK 57 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+++ LI+GE+D VHS KDMP ++ + L + A RED RDV I Q+ D Sbjct: 58 GLFVKELDEALINGEVDITVHSYKDMPMQIDEDLPVVALSTREDERDVLILPKGQTFSD- 116 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +G SS RR + L+ ++ RG + TRL KL++ + AI+LA AGIKRL Sbjct: 117 ---KPVGCSSERR-TMQLKELGFENIKPLRGNVITRLKKLDDGEYSAIVLAAAGIKRLGL 172 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I +++ P+ QG I ++ + ++ + + ERAF+ L+ Sbjct: 173 EERISRYFTVDEIMPAACQGIIAVQARKGEDTS--YLRCFHSYASQVISEAERAFITALN 230 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 G C S +A +AY L G+ + + KI S++G A +G + A ++ Sbjct: 231 GGCSSPVAAYAYLDKDILVLNGLYVDKENKIAVRGSQHGTPAQAAVLGEELANRLK 286 >gi|292385|gb|AAA60030.1| hydroxymethylbilane synthase [Homo sapiens] Length = 344 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 98/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L + P II +ST GD+I + L++IG K LFT Sbjct: 4 IRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 62 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181 SV+GTSSLRR A L R + RG + TRL K++ + AI+LA AG++R+ Sbjct: 122 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKMDEQQEFSAIILATAGLQRMGW 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 182 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 242 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 270 >gi|208434184|ref|YP_002265850.1| porphobilinogen deaminase [Helicobacter pylori G27] gi|226706288|sp|B5ZA04|HEM3_HELPG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|208432113|gb|ACI26984.1| porphobilinogen deaminase [Helicobacter pylori G27] Length = 306 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 99/285 (34%), Positives = 151/285 (52%), Gaps = 5/285 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L I I + TKGD+I + L +IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANHIKERLKKECFIESE---IQIVKTKGDKILDTPLNKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L + + Sbjct: 63 LEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL+ + + Sbjct: 123 GTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++E+ PS GQGA+ +E N+ L K +N E++ + ER F+ L+G C+ Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFATLQK-LNDEESAFCCHLEREFVKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 I A G + ++ +GK + G++ A ++ +D Sbjct: 242 PIGVHASLMGDRVKIQAVLGLPNGKEVITKEKRGDKTKAFDLVQD 286 >gi|292386|gb|AAA60029.1| hydroxymethylbilane synthase [Homo sapiens] Length = 361 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 98/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L + P II +ST GD+I + L++IG K LFT Sbjct: 21 IRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 79 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 138 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181 SV+GTSSLRR A L R + RG + TRL K++ + AI+LA AG++R+ Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKMDEQQEFSAIILATAGLQRMGW 198 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 199 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 258 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 259 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 287 >gi|297201478|ref|ZP_06918875.1| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083] gi|197716811|gb|EDY60845.1| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083] Length = 319 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 23/309 (7%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K R+GTR S LALA + ++ V P + ++ ++T GD ++ L +IGG Sbjct: 1 MSTKALRLGTRRSKLALAQSGRVAEAVSQVTGRP---VELVEITTYGD-VSKEALAQIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L+ GE+D AVHS KD+PT L ++A RED RDV ++ A D Sbjct: 57 TGVFVTALREALLKGEVDFAVHSLKDLPTGQPDELVLAALPEREDPRDVIVARDALKFTD 116 Query: 121 LALHSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + IGT S RR A L + DI + RG I+TR+ + + + A++LA AG+ Sbjct: 117 LPPGARIGTGSPRRTAQLNAYARAHGLDIETVAIRGNIDTRMRFVRDGELDAVVLAAAGL 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED---TWDSVNCE 233 +R+ + + + L+++ P+PGQGA+ IE +N +L+ + D T +V E Sbjct: 177 QRIGRIDEVTDFLSVDTVLPAPGQGALAIECTADN---ADLIAALGELDDPFTRVAVTAE 233 Query: 234 RAFLAELDGSCKSAIAGFA--YCKGS---TLYFYGIVLASDGKIFHEVSRNGNRCD---- 284 R+ LA L+ C + + A G + G+V +DG ++S G + Sbjct: 234 RSLLAALEAGCSAPVGALADLLADGQIVKEMRLRGVVGTTDGSRMVQLSTTGPVPETYDQ 293 Query: 285 AINIGRDAA 293 A+ +GR+ A Sbjct: 294 AMALGRELA 302 >gi|295317401|ref|NP_001171280.1| porphobilinogen deaminase isoform 2a [Felis catus] gi|289191083|gb|ADC93654.1| hydroxymethylbilane synthase erythroid form 2a [Felis catus] gi|289191085|gb|ADC93655.1| hydroxymethylbilane synthase erythroid form 2b [Felis catus] Length = 344 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 98/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L ++ P I+ +ST GD+I + L++IG K LFT Sbjct: 4 IRVGTRKSQLARIQTDSVVAVLKALY--PGLQFEIVAMSTTGDKILDTALSKIGEKSLFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 62 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLETLP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181 SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 122 EKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDEFQEFSAIILAAAGLQRMGW 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 182 QHRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 242 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 270 >gi|288561002|ref|YP_003424488.1| porphobilinogen deaminase HemC [Methanobrevibacter ruminantium M1] gi|288543712|gb|ADC47596.1| porphobilinogen deaminase HemC [Methanobrevibacter ruminantium M1] Length = 289 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 97/293 (33%), Positives = 157/293 (53%), Gaps = 10/293 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LAL R L ++ +I TKGD+ITN L + KGLFT E Sbjct: 3 VGTRGSKLALVQTDYIRQCLYNITGEEVEKNII---KTKGDKITNSQLYNMDSKGLFTRE 59 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 ++ L+ E+D AVHS KD+PT+L + L+I A RE +V IS+ + S +L S + Sbjct: 60 LDNALLDEEVDFAVHSLKDVPTELNEDLEIVAVPIRESPNEVLISNYSWS--ELEEGSTL 117 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A D + RG +ETR+ K+ + + A ++A AG+ RL +K IK Sbjct: 118 GTSSLRREAFCKHHNKDFELKPIRGNVETRIEKVMDGQVDATIMAEAGLNRLGLQKYIKA 177 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + P+ GQGA+ + T + + +E ++ +NH + V E+ L E+ C+ Sbjct: 178 KFPTDYIMPAAGQGALAVMTR-KDSEHKETIRKLNHYFSHQEVLAEKTILEEIGVGCQWP 236 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA----INIGRDAAQYI 296 I + K + L I+L +G+I ++ + +G+ +A + IG++ ++I Sbjct: 237 IGAISGIKNNQLELKSILLDKNGEILYQKTLSGSIREAKEMGVQIGKEMIEFI 289 >gi|144479|gb|AAA23113.1| porphobilinogen deaminase [Prosthecochloris vibrioformis] Length = 279 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 92/239 (38%), Positives = 130/239 (54%), Gaps = 9/239 (3%) Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPT----KLL 92 NI + + T GD + + L++IG GLFT++IEK L++GEID AVHS KD+PT L Sbjct: 2 NISLKLVKTTGDVLLDSPLSKIGDMGLFTKDIEKHLLAGEIDLAVHSLKDVPTVRRKAWL 61 Query: 93 KGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRG 152 S PR R F Q + + + + TSSLRR + LL R D+ ++D RG Sbjct: 62 SPRSPSVKTPR---RHHF--QVRQGVDGPSAEAKMATSSLRRMSQLLSLRPDLEIMDIRG 116 Query: 153 KIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNP 212 + TR K + A++LAYAG+ RL+ I EIL E P+ GQGA+ IET ++ Sbjct: 117 NLNTRFKKFDEGDFDAMMLAYAGVYRLEFSDRITEILPHETMLPAVGQGALGIETRTDDA 176 Query: 213 KAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 + +E+V+V+N ++T ERA L L G C+ I F TL V + DGK Sbjct: 177 ETREIVRVLNDDNTEMCCRAERALLRHLQGGCQIPIGSFGSYIDGTLKLLAFVGSVDGK 235 >gi|237742175|ref|ZP_04572656.1| porphobilinogen deaminase [Fusobacterium sp. 4_1_13] gi|229429823|gb|EEO40035.1| porphobilinogen deaminase [Fusobacterium sp. 4_1_13] Length = 302 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 102/272 (37%), Positives = 140/272 (51%), Gaps = 5/272 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60 KK IG+R S LALA A + L + P I + T GD+ +N ++I Sbjct: 2 KKNIIIGSRGSILALAQANLIKDKLQINY--PNLTFTIKEIVTSGDKDLKSNWENSDISL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 LPQGAKVGTSSLRRAMNLKTVRPDFEIKHLRGNIHTRLKKLETENYDAIVLAAAGLKRTG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E LN E FPP+P QG + I+ N+ + ++++K I+++ V ER F Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKKILKSIHNKAVAKIVEIEREFSKIF 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272 DG C + + ++ G + F + L +I Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTAVYLDEGKQI 270 >gi|256845448|ref|ZP_05550906.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_36A2] gi|256719007|gb|EEU32562.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_36A2] Length = 302 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 101/266 (37%), Positives = 138/266 (51%), Gaps = 5/266 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60 KK IG+R S LALA A + L + P I + T GD+ +N ++I Sbjct: 2 KKNIIIGSRGSILALAQANLIKDKLQINY--PNLTFTIKEIVTSGDKDLKSNWENSDISL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 LPQGAKVGTSSLRRAMNLKTVRPDFEIKHLRGNIHTRLKKLETENYDAIVLAAAGLKRTG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E LN E FPP+P QG + I+ N+ + ++++K I+++ V ER F Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKKILKSIHNKAVAKIVEIEREFSKIF 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVL 266 DG C + + ++ G + F + L Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTAVYL 264 >gi|225012137|ref|ZP_03702574.1| porphobilinogen deaminase [Flavobacteria bacterium MS024-2A] gi|225003692|gb|EEG41665.1| porphobilinogen deaminase [Flavobacteria bacterium MS024-2A] Length = 300 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 97/266 (36%), Positives = 144/266 (54%), Gaps = 8/266 (3%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 RIGTR S LAL A E ++ +++ P ++ + + GD+ N+ L +G +G+FT+ Sbjct: 3 RIGTRKSKLALWQANEVKA-ILESEGYP---CCLVHIESNGDQDLNQPLYAMGIQGVFTK 58 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 ++ L++ +ID AVHS KD+PT L KG+ I A L R + DV + + A + Sbjct: 59 TLDTALLNEKIDIAVHSLKDVPTLLPKGINIKAVLSRGNPMDVLVYNPA--FMGWETEAS 116 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGT SLRRKA LR V + RG ++ R+ KLNN+ + A AG+ RL + Sbjct: 117 IGTGSLRRKAQWLRKNPKHQVENLRGNLQKRIEKLNNSNWSGAIFAQAGLDRLNLLQDNY 176 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E+L E P+P QG I I + N + ++ IN +T ER+FL L+G C + Sbjct: 177 EVL--EWMIPAPSQGIIGIASLEKNKELNAVLDKINCAETSLCAQIERSFLNTLEGGCTA 234 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKI 272 I AYC +TLYF G + + DG I Sbjct: 235 PIGAHAYCIENTLYFKGGLFSLDGTI 260 >gi|166033239|ref|ZP_02236068.1| hypothetical protein DORFOR_02964 [Dorea formicigenerans ATCC 27755] gi|166027596|gb|EDR46353.1| hypothetical protein DORFOR_02964 [Dorea formicigenerans ATCC 27755] Length = 310 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 95/266 (35%), Positives = 140/266 (52%), Gaps = 2/266 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +R+GTR S LALA + L ++VII T GD L +IG KG+F Sbjct: 3 YRVGTRGSKLALAQTKQVIEKLKSAFPEDEFDVVII--KTTGDMDQKSRLDQIGSKGIFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE++L+ +I AVHS KDMP GL + RED RDV I A S+ DL + Sbjct: 61 KEIEEELLEEKIHLAVHSMKDMPDTTADGLIFAKAWKREDPRDVLILREAVSVDDLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGT S RRK LL+ R D++++ RG ++TR+ K+ + I+LA AGI RL +E+ I Sbjct: 121 VIGTGSKRRKYQLLKIRPDLNIVGIRGNVDTRIRKMQEEEMDGIVLAVAGINRLGREQEI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L + P+P QG + +E +N + + ++ ++T V ER FL ++ GSC Sbjct: 181 TCYLEPDQMIPAPAQGTLALEVKADNIQLIRKLNRLSDQETDICVKAERQFLKQIGGSCH 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK 271 + + + L + DGK Sbjct: 241 LPVGAYCKIQDEKLVLRAMFGTEDGK 266 >gi|35309|emb|CAA28499.1| unnamed protein product [Homo sapiens] Length = 361 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 99/269 (36%), Positives = 140/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L + P II +ST GD+I + L++IG K LFT Sbjct: 21 IRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 79 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 138 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181 SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 198 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + +IL+ E + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 199 HNRVGQILHPEKCMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 258 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 259 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 287 >gi|194864825|ref|XP_001971126.1| GG14785 [Drosophila erecta] gi|190652909|gb|EDV50152.1| GG14785 [Drosophila erecta] Length = 650 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 100/282 (35%), Positives = 150/282 (53%), Gaps = 18/282 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+G+R S LAL +T+ + + K+ P I +ST GDR+ N +L +IG K LF Sbjct: 8 IRVGSRKSELAL---IQTKHVIGRLQKLYPKQKFEIHTMSTFGDRVLNVSLPKIGEKSLF 64 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDL 121 T ++E L +G +D VHS KD+PT L G+ I A L RED RD + + ++ L Sbjct: 65 TRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRDNFKGHTIASL 124 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRL 179 SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA AG+ R+ Sbjct: 125 PKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQAGLVRM 184 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I ++L D + GQGA+ +E N+ + +++ + +T + ER+FL Sbjct: 185 GWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERSFLKT 244 Query: 240 LDGSCKSAIAGFAYCKGST---------LYFYGIVLASDGKI 272 L G C + +A ++ KG L G V + DG I Sbjct: 245 LGGGCSAPVAVWSNLKGEPLNGNSQEVGLSLTGAVWSLDGAI 286 >gi|262341328|ref|YP_003284183.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272665|gb|ACY40573.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 309 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 105/290 (36%), Positives = 149/290 (51%), Gaps = 13/290 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK RIGTR SPLA+ A + L+ H + + ++GD I N + + G Sbjct: 2 KKIIRIGTRNSPLAVFQA-QKVQKLLKKEGYFSH---LFKIKSEGDLIQNVPIHALKHVG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDL 121 +FT+++ ++SGEID AVHS KD+P L +G+ +SA+L RE D + ++ L D Sbjct: 58 VFTKKLTNIMLSGEIDMAVHSLKDVPINLPEGIILSAFLKRESFFDSLVYKGSSDFLYDP 117 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +H+VI T S+RR A +ID RG I TRL KL N+ L A G++RL Sbjct: 118 KIHAVIATGSIRRSAFWKNRYPHHGLIDLRGNINTRLKKLQNSSWKGALFAQVGLERLGI 177 Query: 182 EKVIKEILN---IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 K LN ++ PSPGQG I + T L+K ++ +T S N ER FL Sbjct: 178 LNNFK-CLNCKILDWMIPSPGQGIIVVSTLEKKDSINSLIKKLDDIETRLSANIERQFLK 236 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--SRNGNRCDAI 286 L G C S I A K +YF G++L+ DG H++ +R G D I Sbjct: 237 TLGGGCISPIGAHAKIKNKIIYFTGMLLSLDG--MHKIKKTRIGTNYDLI 284 >gi|291412990|ref|XP_002722769.1| PREDICTED: hydroxymethylbilane synthase [Oryctolagus cuniculus] Length = 365 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 98/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L ++ P II +ST GD+I + L++IG K LFT Sbjct: 25 IRVGTRKSQLARIQTDSVVATLKTLY--PGLRFEIIAMSTTGDKILDTALSKIGEKSLFT 82 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G + A RE+ D + H ++L L Sbjct: 83 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTVGAICKRENPCDAVVFHPKFVGKTLATLP 142 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181 SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 143 ERSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDEQQEFSAIILAVAGLQRMGW 202 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 203 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLKHLE 262 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 263 GGCSVPVAVHTAMKDGQLYMTGGVWSLDG 291 >gi|71892349|ref|YP_278083.1| porphobilinogen deaminase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|123747812|sp|Q491Z6|HEM3_BLOPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|71796455|gb|AAZ41206.1| porphobilinogen deaminase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 300 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 94/270 (34%), Positives = 139/270 (51%), Gaps = 2/270 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ K +I TR S LA+ A + L H P +I ++P+ T GD+ N Sbjct: 1 MKNKILKIATRKSQLAICQAQYVHNELKHYH--PTLSIELMPIVTTGDKFLNIDAKNKIK 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG F +E+E LI+ D AVHS KD+ L L + R D RD F+S ++ Sbjct: 59 KGAFIKELEHALINFRADIAVHSMKDITVPLPDELTLPVLCKRNDPRDAFVSLKYPNIDT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + SVIGTSSLRR+ + R D+ V + RG I+TRL KL + AI+LA AG++RL+ Sbjct: 119 LPIGSVIGTSSLRRQCQIRAHRPDLVVSNLRGNIDTRLKKLQYGQYDAIVLAVAGLQRLQ 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ ++ D P+ GQG I IE N+ L+ + H++T V ERA L Sbjct: 179 LHEYIRVHIDPSDLLPAMGQGVIAIECRSNDADILSLLSPLYHQETSFRVRAERAVTTYL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 + C IA +A + ++ ++ DG Sbjct: 239 ESYCHLPIASYAEIEEDQIWLRALIGLPDG 268 >gi|301788448|ref|XP_002929638.1| PREDICTED: porphobilinogen deaminase-like isoform 1 [Ailuropoda melanoleuca] Length = 361 Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 98/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L + P I+ +ST GD+I + L++IG K LFT Sbjct: 21 IRVGTRKSQLARIQTDSVVAMLKAFY--PGLQFEIVAMSTTGDKILDTALSKIGEKSLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 79 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLETLP 138 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181 SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQRMGW 198 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 199 QHRVGQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIAERAFLRHLE 258 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 259 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 287 >gi|295317399|ref|NP_001171279.1| porphobilinogen deaminase isoform 1a [Felis catus] gi|289191079|gb|ADC93652.1| hydroxymethylbilane synthase housekeeping form 1a [Felis catus] Length = 361 Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 98/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L ++ P I+ +ST GD+I + L++IG K LFT Sbjct: 21 IRVGTRKSQLARIQTDSVVAVLKALY--PGLQFEIVAMSTTGDKILDTALSKIGEKSLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 79 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLETLP 138 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181 SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDEFQEFSAIILAAAGLQRMGW 198 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 199 QHRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 258 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 259 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 287 >gi|124027712|ref|YP_001013032.1| porphobilinogen deaminase [Hyperthermus butylicus DSM 5456] gi|158513943|sp|A2BL26|HEM3_HYPBU RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123978406|gb|ABM80687.1| Porphobilinogen deaminase [Hyperthermus butylicus DSM 5456] Length = 303 Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 97/304 (31%), Positives = 159/304 (52%), Gaps = 13/304 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+ TR S L++A ++ V + +VI+ T+GD ++ T IGGKGLF Sbjct: 3 LRVATRGSKLSIAQTMIALEAIKRVEPSLEYELVIV--KTRGDIHQDKPFTAIGGKGLFE 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSLKDLAL 123 +E+ ++ G D AVHS KD+P+ + GL ++ PR+ DV + +++ DL Sbjct: 61 KEVNLAVLEGRADIAVHSLKDVPSAISPGLVLAMTPPRDPPYDVLVVRGGKEKTIWDLPS 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 +++GTSS RR A+L R D+ RG ++TRL KL + AI+LA AG+KRL + Sbjct: 121 GAIVGTSSARRVAMLKHVRRDLVFKVLRGNVDTRLRKLEQGQYDAIVLAEAGLKRLGVDI 180 Query: 183 ---KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 ++ +IL PP+PGQG I + T + +++ + + ERAFLA Sbjct: 181 EYWRIPPDIL-----PPAPGQGIIGVYTLSSRSDILPILEKASDQKAMAEARAERAFLAY 235 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G C + + +A +G+TLYF+ + + DG EV G+ +G +AA +R + Sbjct: 236 AGGGCHTPLGAYAELRGNTLYFHAALASPDGSRRVEVRVEGDPDKPTQVGLEAAFELRRL 295 Query: 300 SNKN 303 + + Sbjct: 296 AARE 299 >gi|301788450|ref|XP_002929639.1| PREDICTED: porphobilinogen deaminase-like isoform 2 [Ailuropoda melanoleuca] Length = 344 Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 98/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L + P I+ +ST GD+I + L++IG K LFT Sbjct: 4 IRVGTRKSQLARIQTDSVVAMLKAFY--PGLQFEIVAMSTTGDKILDTALSKIGEKSLFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 62 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLETLP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181 SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 122 EKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQRMGW 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 182 QHRVGQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIAERAFLRHLE 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 242 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 270 >gi|157125875|ref|XP_001654431.1| porphobilinogen deaminase [Aedes aegypti] gi|108873496|gb|EAT37721.1| porphobilinogen deaminase [Aedes aegypti] Length = 534 Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 101/278 (36%), Positives = 150/278 (53%), Gaps = 15/278 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+G+R S LAL +T+ + + K+ P I ++T GDR+ N++L +IG K LF Sbjct: 10 IRVGSRKSELAL---IQTKHVIACLQKLNPDVQYEIHTMTTVGDRVLNKSLPKIGEKSLF 66 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDL 121 T+++E L +G +D VHS KD+PT L G+ I A L RED RD + + ++L L Sbjct: 67 TKDLEDALRNGGVDFVVHSLKDLPTSLPIGMAIGAVLEREDPRDALVLNEKFRGKTLSTL 126 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRL 179 SVIGTSSLRR A L R + V D RG + TRL KL+ +K I+LA AG+ R+ Sbjct: 127 PKGSVIGTSSLRRSAQLARLHPHLVVCDIRGNLNTRLAKLDAEGSKFAGIVLAQAGLVRM 186 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 EK I +++ + + GQGA+ +E N+ ++ + H +T + ER+FL Sbjct: 187 GWEKRIDQVIEPSEILYAVGQGALAVECRSNDEYILNMLSKLCHLETQCKILVERSFLKT 246 Query: 240 LDGSCKSAIAGFAY------CKGSTLYFYGIVLASDGK 271 L G C + +A K + L G V + DGK Sbjct: 247 LGGGCSAPVAVCTSLKRKHDSKSNYLNIQGAVWSLDGK 284 >gi|305665660|ref|YP_003861947.1| porphobilinogen deaminase [Maribacter sp. HTCC2170] gi|88710417|gb|EAR02649.1| porphobilinogen deaminase [Maribacter sp. HTCC2170] Length = 529 Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 98/294 (33%), Positives = 149/294 (50%), Gaps = 8/294 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LAL A ++ L + H ++P+ + GD + ++ L E+G G+ Sbjct: 3 KIIRIGTRDSELALWQANAVKNQLEAL----GHQTTLVPVKSTGDIVLDKPLYELGVTGI 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ ++ +++G+ID AVHS KD+PT L KG+ +A L R + D+ + + Sbjct: 59 FTKTLDVAMLNGDIDIAVHSMKDVPTALPKGIVQAAVLKRANYLDILAYNDNEEFLG-GR 117 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++I T SLRRKA L +V+D RG I +R+ KLN+N + + A AG+ R+ E Sbjct: 118 DAIIATGSLRRKAQWLNRYPTHTVVDLRGNINSRMQKLNDNDWNGAIFAAAGLDRIGLEH 177 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + + + P+P QGAI + N+ E +NHE T ER FL L+G Sbjct: 178 --ENTIGLTWMVPAPAQGAIMVVALENDEYVLEACAQMNHEATEICTGLEREFLRILEGG 235 Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C + I AY K + G++L+ DGK E N+ RD A I Sbjct: 236 CTAPIGALAYINKEEEVKLKGVLLSLDGKKRLEAEFAEPLGKHQNMARDCANSI 289 >gi|220913234|ref|YP_002488543.1| porphobilinogen deaminase [Arthrobacter chlorophenolicus A6] gi|219860112|gb|ACL40454.1| porphobilinogen deaminase [Arthrobacter chlorophenolicus A6] Length = 332 Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 99/292 (33%), Positives = 152/292 (52%), Gaps = 30/292 (10%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL +T L V P + ++ + T GD +T L+++GG G+F Sbjct: 3 VRIGTRASKLALTQTQQTADQLAAVGGFP---VELVHIRTDGDVLTG-PLSQMGGTGVFV 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + L+ E D AVHS KD+PT GL ++A R D+RDV + L DL + Sbjct: 59 AALRDALLRNECDVAVHSLKDLPTGAAVGLSLAATPKRVDVRDVLCARDGLKLADLPAGA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK---LNNNKAH-----------AILL 171 +GT S RR A L R+D+ ++D RG ++TRL + L N + A++L Sbjct: 119 KVGTGSPRRAAQLRAARADLEIVDIRGNVDTRLGRVPGLPGNATNEVVPGKSCDLDAVVL 178 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH-VNNPK-------AQEL----VK 219 A AG++R+ + + E L + P+ GQG++ IE+ + P+ +QE+ + Sbjct: 179 AAAGLERISRLDAVSEYLEPDVMLPAAGQGSLAIESRTADAPRKPGSTEGSQEVLAQALA 238 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 ++ DT +V ERA LA L+ C + + +AY KGS L+ +V A DGK Sbjct: 239 ALDDPDTRLAVTAERALLARLEAGCAAPVGAYAYRKGSMLHLEAVVCAVDGK 290 >gi|326930594|ref|XP_003211431.1| PREDICTED: vacuolar protein sorting-associated protein 11 homolog, partial [Meleagris gallopavo] Length = 1060 Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 92/235 (39%), Positives = 129/235 (54%), Gaps = 4/235 (1%) Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99 I+ +ST GD+I + L++IG K LFT+E+E L E+D VHS KD+PT L G I A Sbjct: 752 IVAMSTTGDKILDTALSKIGEKSLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGA 811 Query: 100 YLPREDIRDVFISHTAQSLKDLAL---HSVIGTSSLRRKALLLRWRSDISVIDFRGKIET 156 RE+ D + H K L+L SVIGTSSLRR A L + + D RG + T Sbjct: 812 ICKRENPLDAVVFHPKNCGKTLSLLPEKSVIGTSSLRRAAQLKKKFPQLEFRDIRGNLNT 871 Query: 157 RLNKLNNNKA-HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215 RL KL+ + AI+LA AG+KR+ E I ++L+ ED + GQGA+ +E + + Sbjct: 872 RLKKLDEKEDFSAIILAAAGLKRMGWENRIGQLLSPEDCLYAVGQGALAVEVRAKDQETL 931 Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 +V V++ +T ERAF+ L+G C +A K LY G V + DG Sbjct: 932 NMVSVLHDGETVLCCIAERAFMKHLEGGCSVPVAVNTMLKDGQLYLTGAVYSLDG 986 >gi|323358316|ref|YP_004224712.1| porphobilinogen deaminase [Microbacterium testaceum StLB037] gi|323274687|dbj|BAJ74832.1| porphobilinogen deaminase [Microbacterium testaceum StLB037] Length = 372 Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 86/269 (31%), Positives = 143/269 (53%), Gaps = 7/269 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LALA + ++ + ++P+ ++GD + +L+++GG+G+F Sbjct: 4 PLRLGTRRSALALAQSQMVADAVAAASG---REVELVPIVSEGD-VNRASLSQLGGRGVF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L +G D VHS KD+PT +GL I+A PRED RDV I+ L L Sbjct: 60 ANGLREALAAGRCDFLVHSLKDLPTAQPEGLVIAATPPREDARDVVITRDGTPLHALEAG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-- 182 + +GT S RR A LR + + D RG +++RL ++ + + A++LA AG+ RL E Sbjct: 120 ARVGTGSPRRIAQALRHNPRLDIRDIRGNVDSRLARVRDGELDAVILAAAGLSRLGGELG 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + E L + ++P +PGQG++ +ET + + + ++ E T ++ ER L+ LD Sbjct: 180 GLQSEPLGLAEWPTAPGQGSLAVETRTDIDADILAALSALDDEVTRAAITAERTVLSVLD 239 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 C + + A L +V A DG Sbjct: 240 AGCHAPVGTHASIVDGDLRLRAVVYALDG 268 >gi|302559228|ref|ZP_07311570.1| porphobilinogen deaminase [Streptomyces griseoflavus Tu4000] gi|302476846|gb|EFL39939.1| porphobilinogen deaminase [Streptomyces griseoflavus Tu4000] Length = 319 Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 96/306 (31%), Positives = 158/306 (51%), Gaps = 17/306 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K R+GTR S LA+A + + ++ V P + ++ ++T GD ++ L +IGG Sbjct: 1 MTEKALRLGTRRSKLAMAQSGQVAEAVSQVTGRP---VELVEITTYGD-VSREHLAQIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L GE+D AVHS KD+PT L ++A RED RDV ++ A L D Sbjct: 57 TGVFVAALREALARGEVDFAVHSLKDLPTTQPDELVVAAIPVREDPRDVVVARDALKLTD 116 Query: 121 LALHSVIGTSSLRRKALLLRW-RS---DISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + IGT S RR A L + RS D + RG ++TR+ + A++LA AG+ Sbjct: 117 LPRGARIGTGSPRRMAQLNAYARSHGMDFETVPIRGNVDTRIGYVTKGDLDAVVLAAAGL 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ + + + + L+++ P+PGQGA+ IE +N + ++ T +V ER+ Sbjct: 177 NRVGRSEDVTDFLSVDTVLPAPGQGALAIECTADNAALIAELAELDDPLTRAAVTAERSL 236 Query: 237 LAELDGSCKSAIAGFA--YCKGS---TLYFYGIVLASDGKIFHEVSRNGNRCD----AIN 287 LA L+ C + + A G + G+V +DG ++S G + A+ Sbjct: 237 LAALEAGCSAPVGALADLLADGQIVKEMRLRGVVGTTDGSTLVQLSTTGPVPETHEAAMA 296 Query: 288 IGRDAA 293 +GR+ A Sbjct: 297 LGRELA 302 >gi|195440018|ref|XP_002067856.1| GK12668 [Drosophila willistoni] gi|194163941|gb|EDW78842.1| GK12668 [Drosophila willistoni] Length = 629 Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 102/287 (35%), Positives = 152/287 (52%), Gaps = 18/287 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIG 59 ++ K R+G+R S LAL +T+ + + K+ P I +ST GDR+ N +L +IG Sbjct: 3 IQDKVIRVGSRKSELAL---IQTKHVIGRLQKLYPKQKFEIHTMSTFGDRVLNISLPKIG 59 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQ 116 K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + + Sbjct: 60 EKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGH 119 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYA 174 S+ L SVIGTSSLRR A + R + V D RG + TRL KL+ ++K I+LA A Sbjct: 120 SIATLPKGSVIGTSSLRRTAQIRRQYPHLVVCDIRGNLNTRLAKLDAADSKFAGIILAQA 179 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G+ R+ I ++L D + GQGA+ +E N+ ++++ + +T + ER Sbjct: 180 GLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDGPVLDMLQKLLCLNTTCRILAER 239 Query: 235 AFLAELDGSCKSAIAGFAYCKGST---------LYFYGIVLASDGKI 272 +FL L G C + +A ++ KG L G V + DG I Sbjct: 240 SFLKTLGGGCSAPVAVWSNLKGEPMTANSQDVGLSLTGAVWSLDGAI 286 >gi|239929697|ref|ZP_04686650.1| porphobilinogen deaminase [Streptomyces ghanaensis ATCC 14672] gi|291438017|ref|ZP_06577407.1| porphobilinogen deaminase 1 [Streptomyces ghanaensis ATCC 14672] gi|291340912|gb|EFE67868.1| porphobilinogen deaminase 1 [Streptomyces ghanaensis ATCC 14672] Length = 319 Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 90/290 (31%), Positives = 150/290 (51%), Gaps = 15/290 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIG 59 M +K R+GTR S LA+A + + ++ V P + ++P++T GD T+R L +IG Sbjct: 1 MTEKALRLGTRRSKLAMAQSGQVAEAVRQVTGRP---VELVPITTYGD--TSREHLAQIG 55 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G G+F + + L GE+D AVHS KD+PT L ++A RED RDV + Sbjct: 56 GTGVFVAALREALARGEVDFAVHSLKDIPTTQPDELVVAAIPVREDPRDVMVGRDVPKFT 115 Query: 120 DLALHSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 DL + IGT S RR A L + +I + RG ++TR+ + + + A++LA AG Sbjct: 116 DLPRGARIGTGSPRRMAQLNAYARAHGMEIETVPIRGNVDTRIGYVRSGELDAVVLAAAG 175 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + R+ + + + + L+++ P+PGQGA+ +E +N + ++ T +V ER+ Sbjct: 176 MNRVGRSEEVTDFLSVDTVLPAPGQGALAVECTADNAPLIAALAELDDPLTRAAVTAERS 235 Query: 236 FLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNG 280 LA L+ C + + A G + G+V +DG ++S G Sbjct: 236 LLAALEAGCSAPVGALADLLGDGQTVKEMRLRGVVGTTDGTKLVQLSTTG 285 >gi|224510663|pdb|3EQ1|A Chain A, The Crystal Structure Of Human Porphobilinogen Deaminase At 2.8a Resolution gi|224510664|pdb|3EQ1|B Chain B, The Crystal Structure Of Human Porphobilinogen Deaminase At 2.8a Resolution Length = 361 Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 98/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L + P II +ST GD+I + L++IG K LFT Sbjct: 21 IRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 79 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 138 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181 SV+GTSSLRR A L R + +G + TRL KL+ + AI+LA AG++R+ Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFRSIQGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 198 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 199 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 258 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 259 GGCSVPVAVHTAMKDGQLYLTGGVWSLDG 287 >gi|213964237|ref|ZP_03392470.1| porphobilinogen deaminase [Capnocytophaga sputigena Capno] gi|213953127|gb|EEB64476.1| porphobilinogen deaminase [Capnocytophaga sputigena Capno] Length = 293 Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 96/269 (35%), Positives = 147/269 (54%), Gaps = 8/269 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LAL A + L + ++ I+ + GD ++ L E+G G+ Sbjct: 2 KTIRIGTRDSELALWQAKTVQHQLEAL----GYSTEIVSTKSHGDIELSKPLYEMGVIGI 57 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ ++ L++GEID AVHS KD+PT L G+ + A L R + DV + S D+ + Sbjct: 58 FTKALDIALLNGEIDIAVHSMKDVPTALPDGIVVGAVLKRGNPHDVLVYKGDLSFLDVEI 117 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + I TSSLRRKA L ++ + RG + TRL KL +N + + A AG++R+ K Sbjct: 118 -ATIATSSLRRKAQWLHRYPHHNIENLRGNVNTRLQKLADNPWNGAIFAAAGLERIN--K 174 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + + L ++ P+P QGAI + H +N Q ++ I+ +T+ + ERAFL L+G Sbjct: 175 LPENHLRLDWMFPAPAQGAIMVTLHEDNVPLQGVLLRIHDGNTYVATQVERAFLRALEGG 234 Query: 244 CKSAIAGFAYCKGST-LYFYGIVLASDGK 271 C + I FA G +YF G + + DGK Sbjct: 235 CTAPIGAFAQYDGQQKVYFKGGLWSEDGK 263 >gi|291452105|ref|ZP_06591495.1| porphobilinogen deaminase 1 [Streptomyces albus J1074] gi|291355054|gb|EFE81956.1| porphobilinogen deaminase 1 [Streptomyces albus J1074] Length = 323 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 94/295 (31%), Positives = 155/295 (52%), Gaps = 21/295 (7%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIG 59 M +K R+GTR S LA+A + + + VH++ + ++ ++T GD T+R L +IG Sbjct: 1 MTEKALRLGTRRSKLAMAQSGQVADA---VHQLTGRPVELVEITTYGD--TSREHLAQIG 55 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G G+F + + L+ GE+D AVHS KD+PT L ++A PRED RDV I+ + Sbjct: 56 GTGVFVAALREALVRGEVDFAVHSLKDLPTAQPDELVLAAVPPREDPRDVLIARDGLRFE 115 Query: 120 DLALHSVIGTSSLRRKALLLRW----RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 +L + +GT S RR A L + R + + RG I+TR+ + + + A++LA AG Sbjct: 116 ELPEGARVGTGSPRRMAQLNAYARGHRMAVETVPIRGNIDTRIGFVRSGELDAVVLAAAG 175 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNN-----PKAQELVKVINHEDTWDSV 230 + R+ + + E L+++ P+PGQGA+ IE + P A L + ++ T +V Sbjct: 176 LHRVGRSDEVTEYLSVDTILPAPGQGALAIECAAGHEADGLPLAAVLAE-LDDPATRAAV 234 Query: 231 NCERAFLAELDGSCKSAIAGFA--YCKGST---LYFYGIVLASDGKIFHEVSRNG 280 ER+ LA L+ C + + A G + G+V + DG ++S G Sbjct: 235 TAERSLLAALEAGCSAPVGALADLLADGQVVKEMRLRGVVGSPDGSALVQLSTTG 289 >gi|307244624|ref|ZP_07526728.1| hydroxymethylbilane synthase [Peptostreptococcus stomatis DSM 17678] gi|306492005|gb|EFM64054.1| hydroxymethylbilane synthase [Peptostreptococcus stomatis DSM 17678] Length = 310 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 103/303 (33%), Positives = 149/303 (49%), Gaps = 20/303 (6%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LALA S ++D K P I + TKGD+I +++L +IG KGLF E Sbjct: 5 VGTRGSALALAQTDSIISLVLD--KFPDLEIEKKIIKTKGDKILDKSLDKIGDKGLFVSE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV- 126 IE++L+ G ID AVHS KDMPTK+ GL+++ R+D RDV + + L+ + Sbjct: 63 IERELLEGTIDFAVHSLKDMPTKISPGLKLAQTPERQDPRDVLVINPKHQLRPEDIMDWL 122 Query: 127 -------IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 IGT S RR + L R I + RG I TRL KL + AI+LA AGI RL Sbjct: 123 RSSQGLKIGTGSKRRTSQLKRINESIQPMMIRGNIGTRLEKLVSQDLDAIVLAAAGINRL 182 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + + E+ P+ GQGA+ IE N+ + + + + ER FL Sbjct: 183 GMDGLNLYHFSYEEMIPACGQGALAIEVRSNDENTDRIFDFLADDQACMEIEAERTFLEV 242 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASD------GKIFHEVSRNGNRCDAINIGRDAA 293 ++G C + G+ G+ D G++ E S G A +G+D A Sbjct: 243 INGGCHVPVGATVKKVGNKWVLMGMYGREDCSSIVYGQLDFEPSLGG----AKKVGQDLA 298 Query: 294 QYI 296 Y+ Sbjct: 299 SYL 301 >gi|194748513|ref|XP_001956689.1| GF24457 [Drosophila ananassae] gi|190623971|gb|EDV39495.1| GF24457 [Drosophila ananassae] Length = 648 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 105/289 (36%), Positives = 152/289 (52%), Gaps = 24/289 (8%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGG 60 ++K R+G+R S LAL +T+ + + K+ P I +ST GDR+ N +L +IG Sbjct: 4 QEKVIRVGSRKSELAL---IQTKHVIGRLQKLYPKQKFEIHTMSTFGDRVLNVSLPKIGE 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV------FISHT 114 K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD F HT Sbjct: 61 KSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHT 120 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLA 172 SL + SVIGTSSLRR A + R + V D RG + TRL KL+ ++K I+LA Sbjct: 121 IASLPN---GSVIGTSSLRRTAQIRRQYPHLVVCDIRGNLNTRLAKLDAADSKFAGIILA 177 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 AG+ R+ I ++L D + GQGA+ +E N+ +++ + +T + Sbjct: 178 QAGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDEPVLAMLQKLMCLNTTCRILA 237 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGST---------LYFYGIVLASDGKI 272 ER+FL L G C + +A ++ KG L G V + DG I Sbjct: 238 ERSFLKTLGGGCSAPVAVWSNLKGEPLNGNTQEVGLSLTGAVWSLDGAI 286 >gi|57167590|ref|ZP_00366730.1| porphobilinogen deaminase [Campylobacter coli RM2228] gi|57020712|gb|EAL57376.1| porphobilinogen deaminase [Campylobacter coli RM2228] Length = 308 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 88/248 (35%), Positives = 137/248 (55%), Gaps = 6/248 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL + L + H+I +++ TKGD + + L +IGGKGL Sbjct: 2 KELVIATRKSQLALWQSEHVAQILKNTHQI---EVLLEGFKTKGDVLLDSPLAKIGGKGL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L Sbjct: 59 FTKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGT+SLRRK LL R D+ +I RG + +R+ KL N AI+LA AGIKRL +K Sbjct: 119 GAKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNGDFDAIILAMAGIKRLDLDK 178 Query: 184 VIKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + ++ P+ QGA+ IE+ +++ + E +K +N ++ ER F++ L+ Sbjct: 179 QVNFVYTFSKDELIPAASQGALGIES-IDDEQILEFLKCLNDDNALIETTIEREFISTLE 237 Query: 242 GSCKSAIA 249 G C+ I Sbjct: 238 GGCQVPIG 245 >gi|13277999|gb|AAH03861.1| Hydroxymethylbilane synthase [Mus musculus] Length = 361 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 98/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT Sbjct: 21 IRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKSLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 79 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLETLP 138 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181 S +GTSSLRR A L R ++ RG + TRL KL+ + AI+LA AG++R+ Sbjct: 139 EKSAVGTSSLRRVAQLQRKFPNLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRMGW 198 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 199 QNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRHLE 258 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 259 GGCSVPVAVHTVMKDGQLYLTGGVWSLDG 287 >gi|330945628|gb|EGH47118.1| porphobilinogen deaminase [Pseudomonas syringae pv. pisi str. 1704B] Length = 201 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 82/202 (40%), Positives = 119/202 (58%), Gaps = 2/202 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGA 202 E I ++++D P+ G G Sbjct: 179 FEDRITSAISVDDSLPAGGPGG 200 >gi|302896420|ref|XP_003047090.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256728018|gb|EEU41377.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 334 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 94/257 (36%), Positives = 137/257 (53%), Gaps = 12/257 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +GTR SPLALA +L + P H I ++T GDR N L GGKG Sbjct: 7 KNVINVGTRKSPLALAQTNIVVDALK--AQFPDHEFPIHGMTTTGDRDQNTALYNFGGKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-------SHTA 115 L+T ++E++L++ E+D VHS KDMPT L +G + RED RD + H Sbjct: 65 LWTSQLEERLVNKELDLVVHSLKDMPTSLPEGCVLGCVTSREDPRDTLVIKKSLQEKHGW 124 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYA 174 ++L DL S+IGTSS+RR A L+R + D RG I+TRL KL ++ + I+LA A Sbjct: 125 KTLADLPAGSIIGTSSVRRIAQLVRRYPTLKFKDHRGNIQTRLQKLEDDPELTGIILAAA 184 Query: 175 GIKRLKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 G++R+ I + L + + GQGA+ +E ++ K + +K I +E T + Sbjct: 185 GLQRMDLGHHISQFLESDTGGILHAVGQGALGVECRADDEKVLKFLKTIENEQTMLACEA 244 Query: 233 ERAFLAELDGSCKSAIA 249 ERA + L+G C I Sbjct: 245 ERAVMRALEGGCSVPIG 261 >gi|156937477|ref|YP_001435273.1| porphobilinogen deaminase [Ignicoccus hospitalis KIN4/I] gi|166217774|sp|A8AAB4|HEM3_IGNH4 RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|156566461|gb|ABU81866.1| hydroxymethylbilane synthase [Ignicoccus hospitalis KIN4/I] Length = 304 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 106/295 (35%), Positives = 151/295 (51%), Gaps = 11/295 (3%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI---GGKGL 63 +I R S L+L S L+ P +I + T GD+ N E+ G GL Sbjct: 4 KIAARGSKLSLKQVSMFTSYLLKF--FPDLEYEVITVKTTGDK-ANAPFEELAKRGLTGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKDLA 122 F +E+ K ++ G+ D AVHS KD+PT+L L+I+A+LPR+ DV IS + DL Sbjct: 61 FEKEVNKAVLEGKADVAVHSLKDLPTELDPRLEIAAFLPRDPPYDVLISRAGNYDIFDLP 120 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SV+GTSS RRKAL+ R D+ V D RG ++TRL KL + AI+LA AG+ RL Sbjct: 121 KGSVVGTSSARRKALIKNLRPDLVVKDLRGNVDTRLEKLRRGEYDAIVLAEAGVSRLGL- 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V L+ FPPSPGQG I T + +L+K I+ + ER L E G Sbjct: 180 NVDYVRLDWRLFPPSPGQGIIVAVTR-KGSEISDLLKSISDVKSEKLATAERTVLKEFGG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C A+ A+ +GS + VL+ G+ +V G + +G AA+ ++ Sbjct: 239 GCFVALGAIAFEEGSLIRLRATVLSPSGRERVDVELIGKGPE--EVGMRAAERLK 291 >gi|119871570|ref|YP_929577.1| porphobilinogen deaminase [Pyrobaculum islandicum DSM 4184] gi|158512988|sp|A1RQK2|HEM3_PYRIL RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|119672978|gb|ABL87234.1| hydroxymethylbilane synthase [Pyrobaculum islandicum DSM 4184] Length = 301 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 153/306 (50%), Gaps = 21/306 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+ TR S L+L E + + V P I+ + T GD I ++ L +IG KG+F Sbjct: 3 IRVATRGSKLSLIQTEELLAQIKAVE--PDVQFEIVVVKTTGDLIQDKPLFQIGVKGIFE 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+ ++ GE D AVHS KD+P++L GL ++ + R DV IS +L+ L + Sbjct: 61 KEVNLAVLRGEADMAVHSLKDLPSELTPGLVLAGFSKRAPPHDVLISRGGYTLETLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSS+RR L R D+ V RG ++TR+ K+ + + A ++A AG++RL Sbjct: 121 VVGTSSVRRAEFLKAVRPDVEVKPLRGNVDTRVGKVLSGQYDAAVMAAAGLQRLYGSSPP 180 Query: 186 KEI--LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I L +E+ PP PGQG + + +L+K + + ERAFLA + Sbjct: 181 VSIVPLRVEEVPPPPGQGIVVAVVKEEDSWLIDLLKKASDKTAAIEATAERAFLAGVGAG 240 Query: 244 CKSAIAGFAYC--KGSTLYFYGIVLASDG-----KIFHEVSRNGNRCDAINIGRDAAQYI 296 C AI G A +GS + G A+ G K+F E D + +G+ AAQ I Sbjct: 241 CHVAIGGVAKLTPQGSLEFTAG--YAAGGAKYVVKVFGE--------DPVEVGKRAAQLI 290 Query: 297 RFISNK 302 + K Sbjct: 291 AEVRQK 296 >gi|122844|sp|P22907|HEM3_MOUSE RecName: Full=Porphobilinogen deaminase; Short=PBG-D; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 361 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT Sbjct: 21 IRVGTRKSQLARIQTETVVAMLKALY--PGIQFEIIAMSTTGDKIVDTALSKIGEKSLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A R++ D + H ++L+ L Sbjct: 79 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRQNPCDAVVFHPKFIGKTLETLP 138 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181 S +GTSSLRR A L R ++ RG + TRL KL+ + AI+LA AG++R+ Sbjct: 139 EKSAVGTSSLRRVAQLQRKFPNLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRMGW 198 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 199 QNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRHLE 258 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 259 GGCSVPVAVHTVIKDGQLYLTGGVWSLDG 287 >gi|46130844|ref|XP_389153.1| hypothetical protein FG08977.1 [Gibberella zeae PH-1] Length = 335 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 94/252 (37%), Positives = 135/252 (53%), Gaps = 12/252 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR SPLALA +L + P H+ I ++T GDR N L GGKGL+T + Sbjct: 13 VGTRKSPLALAQTQIVVDALK--QRFPDHDFPIHSMTTTGDRDQNTALYNFGGKGLWTSQ 70 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-------SHTAQSLKD 120 +E++L++ E+D VHS KDMPT L +G + RED RD + H ++L D Sbjct: 71 LEERLVNRELDIVVHSLKDMPTVLPEGCVLGCVTSREDPRDTLVIKKELQDKHGWKTLAD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179 L S+IGTSS+RR A L+R + D RG I+TRL KL + I+LA AG++R+ Sbjct: 131 LPAGSIIGTSSVRRIAQLVRRYPTLKFKDHRGNIQTRLRKLEEDPDLTGIILAAAGLQRM 190 Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 I + L E+ + GQGA+ +E ++ K +K I +E T + ERA + Sbjct: 191 DLGHHITQFLESENGGILYAVGQGALGVECRGDDEKVLGFLKTIENEQTALACEAERALM 250 Query: 238 AELDGSCKSAIA 249 L+G C I Sbjct: 251 RALEGGCSVPIG 262 >gi|294785256|ref|ZP_06750544.1| hydroxymethylbilane synthase [Fusobacterium sp. 3_1_27] gi|294486970|gb|EFG34332.1| hydroxymethylbilane synthase [Fusobacterium sp. 3_1_27] Length = 302 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 100/266 (37%), Positives = 138/266 (51%), Gaps = 5/266 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60 KK IG+R S LALA A + L + P I + T GD+ +N ++I Sbjct: 2 KKNIIIGSRGSILALAQANLIKDKLQINY--PNLTFTIKEIVTSGDKDLKSNWENSDISL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 LPQGAKVGTSSLRRAMNLKTVRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRTG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E L+ E FPP+P QG + I+ N+ + ++++K I+++ V ER F Sbjct: 179 MTDKITEYLSGEVFPPAPAQGVLYIQCRENDEEIKKILKSIHNKAVAKIVEIEREFSKIF 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVL 266 DG C + + ++ G + F + L Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTAVYL 264 >gi|15644865|ref|NP_207035.1| porphobilinogen deaminase [Helicobacter pylori 26695] gi|2495174|sp|P56140|HEM3_HELPY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|2313328|gb|AAD07304.1| porphobilinogen deaminase (hemC) [Helicobacter pylori 26695] Length = 306 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/282 (34%), Positives = 147/282 (52%), Gaps = 5/282 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANHIKERLKKECLIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L + + Sbjct: 63 LEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL+ + + Sbjct: 123 GTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++E+ PS GQGA+ +E N+ L K +N E + ER F+ L+G C+ Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFATLQK-LNDEKSAFCCRLEREFIKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 I A G + ++ +GK + G++ A ++ Sbjct: 242 PIGVHASLMGDRVKIQAVLGLPNGKEVITKEKQGDKTKAFDL 283 >gi|387507|gb|AAA39891.1| porphobilinogen deaminase (erythroid sp.) [Mus musculus] Length = 344 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT Sbjct: 4 IRVGTRKSQLARIQTETVVAMLKALY--PGIQFEIIAMSTTGDKIVDTALSKIGEKSLFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A R++ D + H ++L+ L Sbjct: 62 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRQNPCDAVVFHPKFIGKTLETLP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181 S +GTSSLRR A L R ++ RG + TRL KL+ + AI+LA AG++R+ Sbjct: 122 EKSAVGTSSLRRVAQLQRKFPNLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRMGW 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 182 QNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRHLE 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 242 GGCSVPVAVHTVIKDGQLYLTGGVWSLDG 270 >gi|332291690|ref|YP_004430299.1| porphobilinogen deaminase [Krokinobacter diaphorus 4H-3-7-5] gi|332169776|gb|AEE19031.1| porphobilinogen deaminase [Krokinobacter diaphorus 4H-3-7-5] Length = 304 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 96/291 (32%), Positives = 146/291 (50%), Gaps = 11/291 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LAL A +S L + + ++P+ + GD I ++ L E+G G+ Sbjct: 3 KTIRIGTRDSELALWQAKTVQSQL----EANGYKTELVPVKSTGDLILDKPLYELGITGI 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ ++ +++G +D AVHS KD+PT L G+ +A LPR + D+ + A K Sbjct: 59 FTKTLDVAMLNGIVDIAVHSMKDVPTALPIGIVQAAVLPRAETEDILVHKGAPDYKQ--- 115 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 I T SLRR+A L + D RG + TRL KL + + A AG+KR+ Sbjct: 116 ACTIATGSLRRQAQWLNRYPNHKTTDIRGNVNTRLQKLEESDWTGAIFAKAGLKRI---N 172 Query: 184 VIKEILNIEDFP-PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E + D+ P+P QGA+ I + E +NH+ T ER FL L+G Sbjct: 173 VLPENYEVLDWMIPAPAQGAMLIVAMEEDQFCLEACATLNHKPTALCTYIEREFLKTLEG 232 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 C + I A G + F G++ + DG EV + ++ +A+ G D A Sbjct: 233 GCTAPIGALAEEIGDDIRFRGVLFSLDGATKIEVEQVVSKANAVGFGTDCA 283 >gi|57242140|ref|ZP_00370080.1| porphobilinogen deaminase [Campylobacter upsaliensis RM3195] gi|57017332|gb|EAL54113.1| porphobilinogen deaminase [Campylobacter upsaliensis RM3195] Length = 308 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 96/269 (35%), Positives = 143/269 (53%), Gaps = 6/269 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR SPLAL + L H I H + STKGD + + L +IGGKGL Sbjct: 2 KKLIIATRKSPLALWQSEFVADILRKTHGIEVH---LEGFSTKGDILLDSPLAKIGGKGL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E ++ + AVHS KD+P+ L +GL ++A RED D +S + L L Sbjct: 59 FTKELENAMLENKAHLAVHSLKDVPSFLPQGLVLAALSVREDDTDALLSELYKDLNALPQ 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++ +GT+SLRRK LL R D+ +I+ RG + +RL +L + AI+LA AG+KRL E Sbjct: 119 NAKVGTTSLRRKMQLLSLRPDLHIINLRGNVNSRLKRLKGGEFDAIILASAGVKRLGLES 178 Query: 184 VIKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +K I ++ P+ QG + I++ N + L++ +N E + ER F+ L+ Sbjct: 179 EVKFIYRFSKDELVPAATQGILGIQSPDKN-EILTLLQCLNDEKSLIESTVERDFIRTLE 237 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C+ I A G + I+ DG Sbjct: 238 GGCQVPIGINAELMGEQITVRSILGLPDG 266 >gi|297180020|gb|ADI16245.1| porphobilinogen deaminase [uncultured bacterium HF0010_16H03] Length = 301 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 95/274 (34%), Positives = 149/274 (54%), Gaps = 7/274 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDV-HKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL A + + + KI + +IP+S++GD +T++ L ++GGKGLF Sbjct: 3 IRIATRKSPLALFQAEYVANQIKQLDQKI---KVELIPMSSEGD-LTDKPLHQVGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + +E L++ D AVHS KD+P L K +I + R D+ ++ S K + Sbjct: 59 IKTLESALLNDSADIAVHSLKDVPANLEKNFKIISVCKRAAASDILLTKKGTSFKSMPEG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S+IGTSS RRKA + R D+S I RG I TR+NKL+ N +++A A ++RL Sbjct: 119 SIIGTSSPRRKAQIKILRPDLSTISVRGNIATRINKLHKNHFDGLIIAKAAMERLNLPFK 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + ++ P+ QG I IE +N +++ IN E ER+F+A+L+GSC Sbjct: 179 NTYEFSYQEMLPAATQGFIGIECIASNKDLIKMLGSINSEKDMILAEAERSFVAQLNGSC 238 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG--KIFHEV 276 S IA + + + + L+ +G +IF E+ Sbjct: 239 LSPIAIYCREESNQILISAKALSQNGDKQIFKEI 272 >gi|387506|gb|AAA39890.1| porphobilinogen deaminase (housekeeping) [Mus musculus] Length = 400 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT Sbjct: 60 IRVGTRKSQLARIQTETVVAMLKALY--PGIQFEIIAMSTTGDKIVDTALSKIGEKSLFT 117 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A R++ D + H ++L+ L Sbjct: 118 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRQNPCDAVVFHPKFIGKTLETLP 177 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181 S +GTSSLRR A L R ++ RG + TRL KL+ + AI+LA AG++R+ Sbjct: 178 EKSAVGTSSLRRVAQLQRKFPNLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRMGW 237 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 238 QNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRHLE 297 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 298 GGCSVPVAVHTVIKDGQLYLTGGVWSLDG 326 >gi|312964492|gb|ADR30032.1| porphobilinogen deaminase [Ovis aries] Length = 350 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/269 (36%), Positives = 143/269 (53%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L ++ P II +ST GD+I + L++IG K LFT Sbjct: 10 IRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 67 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE D + H ++L+ L Sbjct: 68 KELEHALERNEVDLVVHSLKDLPTVLPPGFTIGAVCKRESPYDAVVFHPKFVGKTLETLP 127 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181 SV+GTSSLRR A L R + + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 128 EKSVVGTSSLRRAAQLQRKFPHLEFRNIRGNLNTRLRKLDELQEFSAIILAAAGLQRMGW 187 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ER+FL L+ Sbjct: 188 QNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERSFLRHLE 247 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + +G Sbjct: 248 GGCSVPVAVHTAIKDGQLYLTGGVWSLNG 276 >gi|149041454|gb|EDL95295.1| hydroxymethylbilane synthase, isoform CRA_a [Rattus norvegicus] Length = 345 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT Sbjct: 5 IRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKSLFT 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 63 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLETLP 122 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181 S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 123 EKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAVAGLQRMGW 182 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 183 QNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 242 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 243 GGCSVPVAVHTVMKDGQLYLTGGVWSLDG 271 >gi|256826210|ref|YP_003150170.1| hydroxymethylbilane synthase [Kytococcus sedentarius DSM 20547] gi|256689603|gb|ACV07405.1| hydroxymethylbilane synthase [Kytococcus sedentarius DSM 20547] Length = 358 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 83/265 (31%), Positives = 140/265 (52%), Gaps = 5/265 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + + + D + H + ++ ++T+GD + L+ IGG G+F Sbjct: 16 VRLGTRRSDLATTQS----THVADALRARGHEVELVLVTTEGD-VNRAPLSRIGGTGVFV 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + L++GEID AVHS KD+P + L I+A RED RD ++ +L+ L + Sbjct: 71 SALRDALLAGEIDIAVHSLKDLPVAQPQELVIAAVPEREDPRDALVARDGLTLETLPAGA 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT S RR+A L R D+ V+D RG + RL + + A++LA AG++RL + + Sbjct: 131 RVGTGSPRREAQLRVARPDLEVVDLRGNVPRRLATVAEGELDAVVLAGAGLRRLGLTEHV 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L + P+PGQGA+ +E ++ ++ +++ ++H T + ERA L L+ C Sbjct: 191 TQWLEPQVMVPAPGQGALAVECRSDDAESIAMLEPLDHLPTRTATTAERAVLGTLEAGCS 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270 + I A G+ + DG Sbjct: 251 APIGALARHDGARVDLMTFAGPRDG 275 >gi|91218004|ref|ZP_01254956.1| porphobilinogen deaminase [Psychroflexus torquis ATCC 700755] gi|91183862|gb|EAS70253.1| porphobilinogen deaminase [Psychroflexus torquis ATCC 700755] Length = 302 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/278 (34%), Positives = 148/278 (53%), Gaps = 16/278 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K IGTR S LA+ A + ++ L + ++ ++ P+ + GD ++ L E+G G+ Sbjct: 3 KTISIGTRDSELAMWQAHKVKTLLEN----QGYSTILKPVKSTGDLNLDQPLYEMGITGI 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ ++ L+ GEID AVHS KD+PT L KG+ A LPR + D+ + + L L Sbjct: 59 FTKTLDVALVKGEIDIAVHSMKDVPTALPKGVVQGAVLPRANTSDILLH---KGLSFLEN 115 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR--LKK 181 I T SLRRKA LR V + RG + TRL KL N+ + + A AG++R LK Sbjct: 116 KGTIATGSLRRKAQWLRKYPQHKVENLRGNVNTRLQKLQNHDWNGAIFAAAGLERINLKP 175 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I+ ++ P+P QGA+ + T +N ++ ++ +NH DT +V ER FL L+ Sbjct: 176 DNHIE----LDWMIPAPAQGAMLVVTMEHNTVCRKALEKLNHTDTALAVRVEREFLKTLE 231 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGK---IFHEV 276 G C + I A K + F + + DGK HEV Sbjct: 232 GGCTAPIGALATIKDREINFRAGLFSLDGKQTFTIHEV 269 >gi|159110463|ref|NP_001103721.1| porphobilinogen deaminase isoform 2 [Mus musculus] gi|74138074|dbj|BAE25434.1| unnamed protein product [Mus musculus] Length = 344 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT Sbjct: 4 IRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKSLFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 62 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLETLP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181 S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 122 EKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRMGW 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 182 QNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRHLE 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 242 GGCSVPVAVHTVMKDGQLYLTGGVWSLDG 270 >gi|116671313|ref|YP_832246.1| porphobilinogen deaminase [Arthrobacter sp. FB24] gi|116611422|gb|ABK04146.1| hydroxymethylbilane synthase [Arthrobacter sp. FB24] Length = 332 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/293 (33%), Positives = 146/293 (49%), Gaps = 32/293 (10%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL +T L + P + ++ + T GD +T +L+++GG G+F Sbjct: 3 VRIGTRASKLALTQTQQTADQLAAIGGFP---VELVHIRTDGDVLTG-SLSQMGGTGVFV 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + L+ + D AVHS KD+PT GL ++A R D+RDV + L DL + Sbjct: 59 AALREALLRDDCDVAVHSLKDLPTGAAPGLNLAATPKRVDVRDVLCARDGFKLADLPQGA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-----NNNKA---------HAILL 171 +GT S RR A L R D+ V+D RG ++TRL ++ N A A++L Sbjct: 119 RVGTGSPRRAAQLRAARPDLDVVDIRGNVDTRLGRVPGLPGNTTDAVVLGKSCDLDAVVL 178 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV-------------NNPKAQELV 218 A AG++R+ + + E L + P+ GQG++ IE P AQ L Sbjct: 179 AAAGLERIGRLDTVSEYLETDVMLPAAGQGSLAIECRTADAPRRTGSTEGSQGPLAQALA 238 Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 ++ DT +V ERA LA L+ C + + +A+ KGS LY V A DG Sbjct: 239 -ALDDTDTRLAVTAERALLARLEAGCAAPVGAYAFRKGSMLYLEAAVCAVDGS 290 >gi|74181545|dbj|BAE30038.1| unnamed protein product [Mus musculus] Length = 360 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT Sbjct: 21 IRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKSLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 79 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLETLP 138 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181 S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 139 EKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRMGW 198 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 199 QNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRHLE 258 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 259 GGCSVPVAVHTVMKDGQLYLTGGVWSLDG 287 >gi|159110431|ref|NP_038579.2| porphobilinogen deaminase isoform 1 [Mus musculus] gi|74177773|dbj|BAE38979.1| unnamed protein product [Mus musculus] gi|74198532|dbj|BAE39746.1| unnamed protein product [Mus musculus] Length = 361 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT Sbjct: 21 IRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKSLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 79 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLETLP 138 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181 S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 139 EKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRMGW 198 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 199 QNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRHLE 258 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 259 GGCSVPVAVHTVMKDGQLYLTGGVWSLDG 287 >gi|317008888|gb|ADU79468.1| porphobilinogen deaminase [Helicobacter pylori India7] Length = 306 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/282 (34%), Positives = 149/282 (52%), Gaps = 5/282 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANHIQERLKKECLIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L + + Sbjct: 63 LEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL+ + + Sbjct: 123 GTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++E+ PS GQGA+ +E N+ L K +N E++ + ER F+ L+G C+ Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFITLQK-LNDEESAFCCHLEREFIKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 I A G + ++ +GK + G++ A ++ Sbjct: 242 PIGVHASLMGDRVKIQAVLGLPNGKEVITKEKRGDKTKAFDL 283 >gi|78214363|ref|NP_037300.2| porphobilinogen deaminase [Rattus norvegicus] gi|56789892|gb|AAH88162.1| Hydroxymethylbilane synthase [Rattus norvegicus] Length = 361 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT Sbjct: 21 IRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKSLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 79 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLETLP 138 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181 S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 139 EKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAVAGLQRMGW 198 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 199 QNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 258 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 259 GGCSVPVAVHTVMKDGQLYLTGGVWSLDG 287 >gi|2506505|sp|P19356|HEM3_RAT RecName: Full=Porphobilinogen deaminase; Short=PBG-D; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|1911164|emb|CAA72734.1| hemC [Rattus sp.] Length = 361 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT Sbjct: 21 IRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKSLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 79 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLETLP 138 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRLKK 181 S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 139 EKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDEQLEFSAIILAVAGLQRMGW 198 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 199 QNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 258 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 259 GGCSVPVAVHTVMKDGQLYLTGGVWSLDG 287 >gi|148234672|ref|NP_001090881.1| porphobilinogen deaminase [Sus scrofa] gi|112980813|gb|ABI29188.1| hydroxymethylbilane synthase [Sus scrofa] Length = 361 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L ++ P II +ST GD+I + L++IG K LFT Sbjct: 21 IRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE D + H ++L+ L Sbjct: 79 KELEHALERNEVDLVVHSLKDLPTVLPPGFTIGAVCKRECPYDAVVFHPKFVGKTLETLP 138 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181 SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQRMGW 198 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+ Sbjct: 199 QNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE 258 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + +G Sbjct: 259 GGCSVPVAVHTAMKDGQLYLTGGVWSLNG 287 >gi|114051169|ref|NP_001039672.1| porphobilinogen deaminase [Bos taurus] gi|109892198|sp|Q2KIN5|HEM3_BOVIN RecName: Full=Porphobilinogen deaminase; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS gi|86438293|gb|AAI12574.1| Hydroxymethylbilane synthase [Bos taurus] gi|296480113|gb|DAA22228.1| porphobilinogen deaminase [Bos taurus] Length = 361 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/269 (36%), Positives = 142/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L ++ P II +ST GD+I + L++IG K LFT Sbjct: 21 IRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE D + H ++L+ L Sbjct: 79 KELEHALERNEVDLVVHSLKDLPTVLPPGFTIGAVCKRESPYDAVVFHPKFVGKTLETLP 138 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKK 181 SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILATAGLQRMGW 198 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ER+FL L+ Sbjct: 199 QNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERSFLRHLE 258 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + +G Sbjct: 259 GGCSVPVAVHTAIKDGQLYLTGGVWSLNG 287 >gi|325960061|ref|YP_004291527.1| porphobilinogen deaminase [Methanobacterium sp. AL-21] gi|325331493|gb|ADZ10555.1| Porphobilinogen deaminase [Methanobacterium sp. AL-21] Length = 290 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 92/291 (31%), Positives = 155/291 (53%), Gaps = 6/291 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++GTR S LA ++T++ + ++ + I + + + GD+I N L I KG+FT Sbjct: 1 MKVGTRGSSLA---TYQTKTIINELSIVTDEKIDVEIIKSTGDKIQNSQLYNIDAKGIFT 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E++ ++ G +D AVHS KD+PT+L L+I A RE +V +S +L + Sbjct: 58 RELDDAVLDGTVDFAVHSLKDLPTELEGDLEIVAVPERESPNEVLVSKLG--WDELPKGA 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS+RR+A + ++ RG I+TR+ K+ + + A ++A AG+ RL + I Sbjct: 116 TVGTSSIRREAFCNHHDKEFNIKPIRGNIDTRIKKVFSGEYDATIMAEAGLNRLGLTEYI 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 K+ +IE F P+ GQGAI + ++ +L K INH ++ V E+ L E+ C+ Sbjct: 176 KQRFSIEYFTPAAGQGAIAVVARSDSDVKDDLQK-INHLKSFQEVTAEKRVLLEMGVGCQ 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 S + A + L ++L +GKI V G+ A N+G AA+ + Sbjct: 235 SPLGVSARINENKLKLCAVLLTQEGKIVSRVMVEGSADKASNLGLKAAKLM 285 >gi|328768210|gb|EGF78257.1| hypothetical protein BATDEDRAFT_17445 [Batrachochytrium dendrobatidis JAM81] Length = 342 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 96/247 (38%), Positives = 132/247 (53%), Gaps = 7/247 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K F IGTR S LA+ ++ L + P I ++T GD++ + L++IG K Sbjct: 17 KTNFTIGTRESQLAMIQTTHVQALLK--QQYPQLTFDINGMTTTGDQVQDVALSKIGTKS 74 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119 LFT+E+E L +D VHS KD+PT+L G+ + A L RE DV I H+ L Sbjct: 75 LFTKELEMALDDHSVDFVVHSLKDLPTQLPSGMMVGAILEREQPNDVVIMSLKHSFTGLA 134 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177 L S+IGTSS+RR A L R ++ D RG + TRL KL++ + AILLAYAGI Sbjct: 135 QLPAGSIIGTSSVRRSAQLKRRFPNLVFQDIRGNLNTRLKKLDDPASPFAAILLAYAGIH 194 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ I EIL + GQGAI IE N+ + L+ +NH T ER+F+ Sbjct: 195 RMGWTDRITEILPTVTILHAVGQGAIGIECRENDTCVRSLLAPLNHTPTRIRCTAERSFM 254 Query: 238 AELDGSC 244 L+G C Sbjct: 255 RSLEGGC 261 >gi|237740509|ref|ZP_04570990.1| porphobilinogen deaminase [Fusobacterium sp. 2_1_31] gi|229422526|gb|EEO37573.1| porphobilinogen deaminase [Fusobacterium sp. 2_1_31] Length = 301 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 104/271 (38%), Positives = 139/271 (51%), Gaps = 6/271 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR--ITNRTLTEIGG 60 K+ IG+R S LALA A ++SL + P I + T GD+ +N + Sbjct: 2 KRHVVIGSRGSILALAQASLVKNSLEANY--PDLTFEIKEIVTSGDKDLKSNWENSNASL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV IS L Sbjct: 60 KSFFTKEIEQELLDGQIDIAVHSMKDMPAVSPKGLICGAIPDREDARDVLISKNG-FLVT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 LPQGAKIGTSSLRRVMNLKAIRPDFEIKHLRGNIHTRLKKLETEDYDAIILAAAGLKRTG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E L+ E FPP+P QG + I+ N+ + + ++K I++ED V ER F Sbjct: 179 MADKITEYLSGEAFPPAPAQGVLYIQCRENDEEIKGILKSIHNEDIAKIVEIEREFSKIF 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 DG C + + ++ + F + DGK Sbjct: 239 DGGCHTPMGCYSQVDEDKIKFIA-AYSHDGK 268 >gi|117927446|ref|YP_871997.1| hydroxymethylbilane synthase [Acidothermus cellulolyticus 11B] gi|254800230|sp|A0LRF1|HEM3_ACIC1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|117647909|gb|ABK52011.1| hydroxymethylbilane synthase [Acidothermus cellulolyticus 11B] Length = 331 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 92/302 (30%), Positives = 145/302 (48%), Gaps = 9/302 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA A E +L + + I+ + + GDR + L E G G+F Sbjct: 10 LRLGTRRSTLARAQTEEIAGAL----RAAGCRVEIVGIQSTGDRHADVPLHEFAGSGVFV 65 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E+ L+ GE+D VHS KD+PT + L I+A R D RD ++ L +L + Sbjct: 66 AELRAALLRGEVDVVVHSMKDLPTAEIPELAIAAIPRRADPRDALVTGAGCRLAELPTGA 125 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GT S RR A L R D+ + RG ++TRL KL+ A+++A AG+ RL + + Sbjct: 126 IVGTGSPRRAAQLRLLRPDLEIRPIRGNLDTRLGKLHAGGYAALIVAAAGLARLHRSEEA 185 Query: 186 KEILNIEDFPPSPGQGAICIETH----VNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E + P+PGQGA+ +E + + ++ ++ T +V ERA LA + Sbjct: 186 AEFFDPTVMLPAPGQGALAVECRRADIADGGRLAGILAGLDDPATRAAVTAERALLAAVG 245 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD-AAQYIRFIS 300 C + + TL +V+ G S G DA ++GR AA IR + Sbjct: 246 AGCSAPVGALGVVTADTLQLDAVVVDPSGTTAFRRSLTGTPDDASDLGRRLAADLIRAGA 305 Query: 301 NK 302 ++ Sbjct: 306 DQ 307 >gi|108804800|ref|YP_644737.1| porphobilinogen deaminase [Rubrobacter xylanophilus DSM 9941] gi|123069014|sp|Q1AUK3|HEM3_RUBXD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|108766043|gb|ABG04925.1| porphobilinogen deaminase [Rubrobacter xylanophilus DSM 9941] Length = 305 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 86/266 (32%), Positives = 144/266 (54%), Gaps = 5/266 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR SPLALA A + L + + + + T DR + L+ I + +FT + Sbjct: 7 LGTRGSPLALAQAEACAAGL----RAAGFAVELRRIRTTSDRRPDDPLSVIDQRDVFTRQ 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +++ L++GE+D AVHS KD+PT++ +G+ ++A R D D +S + L + + Sbjct: 63 LDEALLAGEVDLAVHSMKDVPTEVPEGIVLAAVAGRADPSDALVSEGGWGVDGLPEGARV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 TSSLRR+A LL R D+ V++ RG ++TR+ K+ A A++LA AG+ RL E V Sbjct: 123 ATSSLRRRAQLLHRRPDLRVVEIRGNVDTRIRKMRAGAAEAVVLARAGLVRLGLE-VPHA 181 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 ++ + P+ GQGA+ + +P+ +E+ + +N V ERA L L+G C+ Sbjct: 182 VIPHDVLLPAVGQGALAVAVRRGDPRLEEIRRALNDPAAEREVAAERALLRALEGGCRVP 241 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIF 273 + A G + G+V++ DG Sbjct: 242 VGARAVAGGRGVLLRGVVVSPDGAAL 267 >gi|297192867|ref|ZP_06910265.1| porphobilinogen deaminase domain-containing protein [Streptomyces pristinaespiralis ATCC 25486] gi|297151527|gb|EFH31219.1| porphobilinogen deaminase domain-containing protein [Streptomyces pristinaespiralis ATCC 25486] Length = 319 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 92/309 (29%), Positives = 158/309 (51%), Gaps = 17/309 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ R+GTR S LA+A + + + V ++ + ++ ++T GD ++ L +IGG Sbjct: 1 MTERALRLGTRRSKLAMAQSGQVAEA---VRRLSGRAVELVEITTYGD-VSREHLAQIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L GE+D AVHS KD+PT L ++A RED RDV I+ S + Sbjct: 57 TGVFVAALREALARGEVDFAVHSLKDLPTTQPDELALAAVPKREDPRDVLIARDGLSFER 116 Query: 121 LALHSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + IGT S RR A L + I + RG ++TR+ + N + A++LA AG+ Sbjct: 117 LPNGARIGTGSPRRMAQLNAYARTHGLTIETVPIRGNVDTRIGFVRNGELDAVVLAAAGL 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ + + + L+++ P+PGQGA+ IE ++ + ++ T +V ER+ Sbjct: 177 NRIGRTDEVTDFLSVDFVLPAPGQGALAIECSASDADLVATLAGLDDPHTRVAVTAERSL 236 Query: 237 LAELDGSCKSAIAGFAYCKG-----STLYFYGIVLASDGKIFHEVSRNG----NRCDAIN 287 LA L+ C + + A G + + G+V +DG ++S G + DA Sbjct: 237 LAALEAGCSAPVGALADLLGDGQEFTEMRLRGVVGTTDGSSLVQLSTTGPVPTSHDDAAA 296 Query: 288 IGRDAAQYI 296 +GR+ A + Sbjct: 297 LGRELADEM 305 >gi|255533333|ref|YP_003093705.1| porphobilinogen deaminase [Pedobacter heparinus DSM 2366] gi|255346317|gb|ACU05643.1| porphobilinogen deaminase [Pedobacter heparinus DSM 2366] Length = 526 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 96/257 (37%), Positives = 141/257 (54%), Gaps = 18/257 (7%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LAL A + L + I+ T+GD+I N L ++ GKG FT+E Sbjct: 6 IGTRGSDLALWQANFIKDKLAAIGVEAELKII----KTQGDKILNLRLDKLEGKGFFTKE 61 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPRED-------IRDVFISHTAQSLKD 120 +E++L+ G ID AVHS KD+PT GL I+A RED ++D + SLK Sbjct: 62 LEEELLGGTIDIAVHSHKDLPTVHPAGLTIAAVTEREDPSELLLILKDCVSINHKLSLKK 121 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 A+ +GTSS RRKA LL R D+++ D RG + TR+ KL + AILLA AG+ RL Sbjct: 122 GAM---VGTSSNRRKAQLLALRPDLNIEDLRGNVPTRIQKLRDEDYDAILLARAGVNRLN 178 Query: 181 KE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + E+++ + P+P QGA+ I+ N + ++++ INH +T + + ER L Sbjct: 179 IDLSEFHVEVVDTTELVPAPAQGALAIQIRENENELFDILQQINHSETAEEIAIERKVLN 238 Query: 239 ELDGSCKSAIAGFAYCK 255 +G C + YCK Sbjct: 239 LFEGGCHMPLG--CYCK 253 >gi|307826350|ref|ZP_07656554.1| porphobilinogen deaminase [Methylobacter tundripaludum SV96] gi|307732591|gb|EFO03464.1| porphobilinogen deaminase [Methylobacter tundripaludum SV96] Length = 321 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 83/209 (39%), Positives = 125/209 (59%), Gaps = 2/209 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 + +K RI TR SPLAL A L P ++ ++T+GD+I + L +IGG Sbjct: 6 LTEKIIRIATRRSPLALWQAEHVAERLE--RTFPGCRTELVKMTTQGDKILDAPLAKIGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P + +GL ++A L RED D F+S+ +L D Sbjct: 64 KGLFVKELEQGMLEGLADIAVHSMKDVPVEFPEGLHLAAILIREDPTDAFVSNHYATLHD 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++ IGTSSLRR+ + + ++ RG + TRL+KL++ + AI+LA AG+KRL Sbjct: 124 LPANARIGTSSLRRQCQIKELYPEAEILSLRGNVNTRLSKLDSGEYDAIILASAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHV 209 + I + L+ P+ GQGAI IE + Sbjct: 184 MAERITQCLDTSVSLPAIGQGAIGIECRI 212 >gi|119963156|ref|YP_948463.1| porphobilinogen deaminase [Arthrobacter aurescens TC1] gi|119950015|gb|ABM08926.1| porphobilinogen deaminase [Arthrobacter aurescens TC1] Length = 332 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 96/291 (32%), Positives = 145/291 (49%), Gaps = 30/291 (10%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL +T L V P + ++ + T+GD + +L+++GG G+F Sbjct: 3 VRIGTRASKLALTQTQQTADQLAAVGGFP---VELVHIKTEGD-VKTGSLSQMGGTGVFV 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + L++ D AVHS KD+PT GL I+A R D+RDV + +L L + Sbjct: 59 AALRDALLADACDVAVHSLKDLPTGAALGLSIAATPKRVDVRDVLCARDGMTLAQLPGGA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK---LNNNKA-----------HAILL 171 +GT S RR A L R DI V+D RG ++TRL + L N A++L Sbjct: 119 KVGTGSPRRAAQLRAARPDIEVLDIRGNVDTRLGRVPGLPGNTTDEVVQGKSCDLDAVVL 178 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKA------------QELVK 219 A AG++R+ + + E + P+PGQGA+ IE + + + + Sbjct: 179 AAAGLERMDRLDTVSEFFESDVMLPAPGQGALAIECRTEDAPSVAGSAEGADGVLAQALA 238 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 +N DT +V ERA LA L+ C + + +A+ KGS L+ +V A DG Sbjct: 239 ALNDHDTRLAVTAERAVLARLEAGCAAPVGAYAFRKGSMLHLEAVVCAVDG 289 >gi|319953182|ref|YP_004164449.1| porphobilinogen deaminase [Cellulophaga algicola DSM 14237] gi|319421842|gb|ADV48951.1| porphobilinogen deaminase [Cellulophaga algicola DSM 14237] Length = 524 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 91/269 (33%), Positives = 144/269 (53%), Gaps = 9/269 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LAL A + L K + V++P+ + GD + ++ L E+G G+ Sbjct: 3 KIIRIGTRDSELALWQARTVQKQL----KEQGYQSVLVPVKSMGDLVLDKPLHELGITGV 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF-ISHTAQSLKDLA 122 FT+ ++ ++ GEID AVHS KD+PT L KG+ +A L R + D+ H + L Sbjct: 59 FTKTLDIAMLKGEIDIAVHSMKDVPTVLPKGIVQAAVLKRGNYMDILAFKHNEEFLSQ-- 116 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VI T SLRRKA L V+D RG ++TR +KL +N + + A AG++R+ E Sbjct: 117 KEAVIATGSLRRKAQWLNRYPTHEVVDLRGNVQTRADKLEDNDWNGAIFAAAGLERVGLE 176 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + + P+P QGA+ + ++ ++ +NH++T ER FL L+G Sbjct: 177 --FENTIGLTWMVPAPAQGAVVVVALEDDEFSKTACAELNHKETEICTTLERKFLNLLEG 234 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 C + I A K + + G++L+ DGK Sbjct: 235 GCTAPIGALAIIKDTNVSLKGVLLSVDGK 263 >gi|183980868|ref|YP_001849159.1| porphobilinogen deaminase HemC [Mycobacterium marinum M] gi|238054421|sp|B2HRJ2|HEM3_MYCMM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|183174194|gb|ACC39304.1| porphobilinogen deaminase HemC [Mycobacterium marinum M] Length = 314 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 91/275 (33%), Positives = 140/275 (50%), Gaps = 14/275 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H ++ +ST GDR + E G G+FT Sbjct: 2 IRIGTRGSLLATTQAATVRDALIANG----HAAELVTISTLGDR--SSAPIETLGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + G +D AVHS KD+PT I+A PR+D RD ++ L +L + S Sbjct: 56 TALREAIEDGRVDAAVHSHKDLPTAQDPRFTIAAIPPRQDPRDAVVARDGLVLGELPVGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLN+++N AI++A AG+ RL + + Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSNGDLDAIVVARAGLARLGRLDDV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ IE + + ++ ++ DT +V ERA LAEL+ C Sbjct: 176 TETLEPVQMLPAPAQGALAIECRAGDSRLATVLAELDDADTRAAVTAERALLAELEAGCS 235 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 + + A S + +G++F E+S G Sbjct: 236 APVGAIAEVVES--------IDEEGRVFEELSLRG 262 >gi|260905127|ref|ZP_05913449.1| glutamyl-tRNA reductase [Brevibacterium linens BL2] Length = 825 Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 90/282 (31%), Positives = 143/282 (50%), Gaps = 17/282 (6%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + + L + + I+ + T+GD + LT GG G+ Sbjct: 477 RTIRLGTRRSKLARSQSTAIAHQLA---ALTGWRVEIVEVVTEGD-VNMSPLTGFGGTGV 532 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F + + L G+ID AVHS KD+PT G+Q++A PR D DV I S +L Sbjct: 533 FVSAVRQALHQGKIDIAVHSLKDLPTTPEAGIQMAAIPPRVDPADVLIGRDGLSFAELPA 592 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+GT S RR L R DI V RG ++TR+ + + + A++LA AG++R+ + Sbjct: 593 GSVVGTGSPRRAVQLRAARPDIEVRGVRGNVDTRIAHVRDGRLDAVVLAAAGVRRIGRLA 652 Query: 184 VIKEILNIEDFPPSPGQGAICIETH-VNNP------------KAQELVKVINHEDTWDSV 230 + L+ + P+PGQGA+ +ET ++P + + +K ++ E T +V Sbjct: 653 EATDSLDFDTMLPAPGQGALAVETRGADSPFALDNEVMEADAEVRTQLKRLHDETTDLAV 712 Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272 CERA L+ + C + I A +GS ++ DGK+ Sbjct: 713 TCERAILSRAEAGCSAPIGALATIQGSDFVVDAVMADDDGKL 754 >gi|198462481|ref|XP_001352446.2| GA21587 [Drosophila pseudoobscura pseudoobscura] gi|198150842|gb|EAL29942.2| GA21587 [Drosophila pseudoobscura pseudoobscura] Length = 630 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 99/286 (34%), Positives = 152/286 (53%), Gaps = 18/286 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGG 60 ++K R+G+R S LAL +T+ + + K+ P I +ST GDR+ N +L +IG Sbjct: 4 QEKVIRVGSRKSELAL---IQTKHVIGRLQKLYPKQRFEIHTMSTFGDRVLNVSLPKIGE 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117 K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + + + Sbjct: 61 KSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFQGHT 120 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAG 175 + L SVIGTSSLRR A + R + V D RG + TRL KL+ +++ I+LA AG Sbjct: 121 IASLPQGSVIGTSSLRRTAQIRRLYPHLIVCDIRGNLNTRLAKLDAADSRFAGIILAQAG 180 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+ Sbjct: 181 LVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDVQVLAMLQKLMCLNTTCRILAERS 240 Query: 236 FLAELDGSCKSAIAGFAYCKGST---------LYFYGIVLASDGKI 272 FL L G C + +A ++ +G L G V + DG I Sbjct: 241 FLKTLGGGCSAPVAVWSNLQGEPLNANSQDVGLSLTGAVWSLDGAI 286 >gi|307636930|gb|ADN79380.1| porphobilinogen deaminase [Helicobacter pylori 908] gi|325997118|gb|ADZ49326.1| Porphobilinogen deaminase [Helicobacter pylori 2017] Length = 306 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 97/285 (34%), Positives = 151/285 (52%), Gaps = 5/285 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L + I + TKGD+I + L++IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANHIKERLKKECSMESE---IRIVKTKGDKILDTPLSKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L + + Sbjct: 63 LEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL + + Sbjct: 123 GTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++++ PS GQGA+ +E N+ L K +N E++ + ER F+ L+G C+ Sbjct: 183 KAFSVKEMIPSMGQGALGVEMLKNHKHFITLQK-LNDEESAFCCHLEREFIKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 I A G + ++ +GK + G++ A ++ R+ Sbjct: 242 PIGVHANLMGDEVKIQAVLGLPNGKEVITKEKQGDKNKAFDLVRE 286 >gi|315638143|ref|ZP_07893325.1| hydroxymethylbilane synthase [Campylobacter upsaliensis JV21] gi|315481679|gb|EFU72301.1| hydroxymethylbilane synthase [Campylobacter upsaliensis JV21] Length = 308 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 95/269 (35%), Positives = 144/269 (53%), Gaps = 6/269 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR SPLAL + L H I + + STKGD + + L +IGGKGL Sbjct: 2 KKLIIATRKSPLALWQSEFVADILRKTHHI---EVDLEGFSTKGDILLDSPLAKIGGKGL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E ++ + AVHS KD+P+ L +GL ++A RED D +S + L L Sbjct: 59 FTKELENAMLENKAHLAVHSLKDVPSFLPQGLVLAALSVREDDTDALLSELYKDLNALPQ 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++ +GT+SLRRK LL R D+ +I+ RG + +RL +L + + AI+LA AG+KRL E Sbjct: 119 NAKVGTTSLRRKMQLLSLRPDLHIINLRGNVNSRLKRLKDGEFDAIILASAGVKRLGLES 178 Query: 184 VIKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +K I ++ P+ QG + I++ N + L++ +N E + ER F+ L+ Sbjct: 179 EVKFIYRFSKDELVPAATQGILGIQSP-NKSEILTLLQCLNDEKSLIESTVERDFIRTLE 237 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C+ I A G + I+ DG Sbjct: 238 GGCQVPIGINAELIGEQITVRSILGLPDG 266 >gi|296394051|ref|YP_003658935.1| porphobilinogen deaminase [Segniliparus rotundus DSM 44985] gi|296181198|gb|ADG98104.1| porphobilinogen deaminase [Segniliparus rotundus DSM 44985] Length = 308 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 158/311 (50%), Gaps = 16/311 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA A R ++ + + +VI+ +T GD+ ++ +TEIG G+FT Sbjct: 2 IRVGTRGSLLATTQAATVRDAIRSLGE--SAELVIV--ATVGDK-SSGPITEIG-VGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + LI+GEID AVHS KD+PT + A R D DV +S + L +L S Sbjct: 56 SALRDALIAGEIDIAVHSLKDLPTAQDPRFSLVAVPERADPSDVLVSRSGLPLAELPPGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT + RR A L R+D+ + RG ++TR+ K+ + AI++A AG+ RL +E+ Sbjct: 116 TVGTGAPRRAAQLRLARADLEIQPIRGNLDTRMRKVATAECDAIVVARAGLLRLGREQEA 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKA-QELVKVINHEDTWDSVNCERAFLAELDGSC 244 E+L+ P+PGQGA+ +E + P + E + ++HE + + ERA LAEL C Sbjct: 176 TEVLHPAVMLPAPGQGALAVECRSDAPASLTETLAKLDHEHSRAASAAERAVLAELSAGC 235 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG----KIFHEVSRNGNRC-----DAINIGRDAAQY 295 + A G TL V+A DG + E S G A+ +GR A+ Sbjct: 236 SGPVGALARMTGQTLRVEASVIAIDGSRSVRAHAETSVLGTELLSQEQHAVALGRRVAES 295 Query: 296 IRFISNKNVFN 306 +R + + Sbjct: 296 LRSMGAMELIG 306 >gi|210134437|ref|YP_002300876.1| porphobilinogen deaminase [Helicobacter pylori P12] gi|226706287|sp|B6JKG8|HEM3_HELP2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|210132405|gb|ACJ07396.1| porphobilinogen deaminase [Helicobacter pylori P12] Length = 306 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 97/282 (34%), Positives = 147/282 (52%), Gaps = 5/282 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANHIKERLKKECLIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L + + Sbjct: 63 LEELLLKGTIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + + Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++++ PS GQGA+ +E N+ L K +N E + ER F+ L+G C+ Sbjct: 183 KAFSVKEMIPSMGQGALGVEMLKNHKHFATLQK-LNDEKSAFCCRLEREFIKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 I A G + ++ +GK + G++ A ++ Sbjct: 242 PIGVHASLMGDRVKIQAVLGLPNGKEVITKEKRGDKTKAFDL 283 >gi|302553238|ref|ZP_07305580.1| porphobilinogen deaminase [Streptomyces viridochromogenes DSM 40736] gi|302470856|gb|EFL33949.1| porphobilinogen deaminase [Streptomyces viridochromogenes DSM 40736] Length = 330 Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 89/279 (31%), Positives = 146/279 (52%), Gaps = 20/279 (7%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+ R+GTR S LA+A + + + V ++ + ++ ++T GD ++ L +IGG Sbjct: 13 EQGALRLGTRRSKLAMAQSGQVAEA---VRRVTGRPVELVEITTYGD-VSREQLAQIGGT 68 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F + L+ GE+D AVHS KD+PT L ++A RED RDV ++ A DL Sbjct: 69 GVFVTALRDALLKGEVDFAVHSLKDLPTTQPDELVVAAVPVREDPRDVIVARDALKFTDL 128 Query: 122 ALHSVIGTSSLRRKALLLRW-RS---DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 + IGT S RR A L + RS DIS + RG ++TR+ + + + A++LA AG+ Sbjct: 129 PSGARIGTGSPRRMAQLNAYARSHSLDISTVPIRGNVDTRIGYVRSGELDAVVLAAAGLN 188 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + + + L+++ P+PGQGA+ IE N + ++ T +V ER+ L Sbjct: 189 RIGRGDEVTDFLSVDTVLPAPGQGALAIECAAGNADLVAALAELDDPFTRVAVTAERSLL 248 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV 276 A L+ C + + A L +DG+I E+ Sbjct: 249 AALEAGCSAPVGALAD------------LLADGQIVKEM 275 >gi|261884538|ref|ZP_06008577.1| porphobilinogen deaminase [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 174 Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 75/170 (44%), Positives = 110/170 (64%), Gaps = 1/170 (0%) Query: 36 HNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGL 95 H++ IIP+ TKGD I + L +IGGKGLF++E+E ++ G D AVHS KD+PT GL Sbjct: 6 HSVEIIPMKTKGDVILDTPLAKIGGKGLFSKELETSMLEGSADIAVHSLKDVPTTFPDGL 65 Query: 96 QISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIE 155 +++ RED+RD +S ++L +L + +GT+SLRRK +L R+D+ +I RG + Sbjct: 66 KLACVCSREDVRDAMLSMKYKNLDELPQGAKVGTTSLRRKMQILAHRADLDIISLRGNVN 125 Query: 156 TRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICI 205 +R+ KL N + AI+LA AGI RL + K K L+I P+ GQGA+ I Sbjct: 126 SRIAKLKNGEFDAIILAMAGINRLNRSKDDKATLSINTI-PAMGQGALGI 174 >gi|257076597|ref|ZP_05570958.1| porphobilinogen deaminase [Ferroplasma acidarmanus fer1] Length = 285 Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 96/268 (35%), Positives = 143/268 (53%), Gaps = 23/268 (8%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P IGTR S LAL A +S+ D + + + I ++ GD N L + G+F Sbjct: 2 PVTIGTRNSKLALIQA----NSVKDALESRGYEVNIKSYTSAGDSNKNIPLYRMSSTGVF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ ++++ GEID AVHSAKD+P+ + KGL+I+A R+D RDV IS T L+++ Sbjct: 58 VDELNERVLKGEIDLAVHSAKDIPSNIQKGLEITAVTGRDDFRDVLISRTP--LEEMTAG 115 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SVIGTSS+RR + +I+V D RG I+TR++K K I++A A KR+K + + Sbjct: 116 SVIGTSSMRRIRQAMTVNPEITVSDIRGNIDTRISKYTEKKYTGIIIAMAAYKRMKLD-I 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 IL+ E F P+P QG I I N+P A + IN +T+ + ER L+ C Sbjct: 175 EHFILSEEQFLPAPNQGIIAIVGKSNSP-ASIISGEINDRETYRDMKNERFIATSLNLGC 233 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKI 272 + +L+ DGKI Sbjct: 234 SMPVG---------------ILSKDGKI 246 >gi|15607651|ref|NP_215024.1| porphobilinogen deaminase [Mycobacterium tuberculosis H37Rv] gi|31791692|ref|NP_854185.1| porphobilinogen deaminase [Mycobacterium bovis AF2122/97] gi|121636428|ref|YP_976651.1| porphobilinogen deaminase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660279|ref|YP_001281802.1| porphobilinogen deaminase [Mycobacterium tuberculosis H37Ra] gi|148821712|ref|YP_001286466.1| porphobilinogen deaminase [Mycobacterium tuberculosis F11] gi|167970665|ref|ZP_02552942.1| porphobilinogen deaminase [Mycobacterium tuberculosis H37Ra] gi|215402275|ref|ZP_03414456.1| porphobilinogen deaminase [Mycobacterium tuberculosis 02_1987] gi|215410034|ref|ZP_03418842.1| porphobilinogen deaminase [Mycobacterium tuberculosis 94_M4241A] gi|215425741|ref|ZP_03423660.1| porphobilinogen deaminase [Mycobacterium tuberculosis T92] gi|215429335|ref|ZP_03427254.1| porphobilinogen deaminase [Mycobacterium tuberculosis EAS054] gi|215444616|ref|ZP_03431368.1| porphobilinogen deaminase [Mycobacterium tuberculosis T85] gi|218752147|ref|ZP_03530943.1| porphobilinogen deaminase [Mycobacterium tuberculosis GM 1503] gi|219556337|ref|ZP_03535413.1| porphobilinogen deaminase [Mycobacterium tuberculosis T17] gi|224988900|ref|YP_002643587.1| porphobilinogen deaminase [Mycobacterium bovis BCG str. Tokyo 172] gi|254230857|ref|ZP_04924184.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis C] gi|254549461|ref|ZP_05139908.1| porphobilinogen deaminase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185382|ref|ZP_05762856.1| porphobilinogen deaminase [Mycobacterium tuberculosis CPHL_A] gi|260199512|ref|ZP_05767003.1| porphobilinogen deaminase [Mycobacterium tuberculosis T46] gi|260203666|ref|ZP_05771157.1| porphobilinogen deaminase [Mycobacterium tuberculosis K85] gi|289441896|ref|ZP_06431640.1| porphobilinogen deaminase [Mycobacterium tuberculosis T46] gi|289446056|ref|ZP_06435800.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis CPHL_A] gi|289552764|ref|ZP_06441974.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN 605] gi|289568434|ref|ZP_06448661.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis T17] gi|289573100|ref|ZP_06453327.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis K85] gi|289744220|ref|ZP_06503598.1| porphobilinogen deaminase [Mycobacterium tuberculosis 02_1987] gi|289749005|ref|ZP_06508383.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis T92] gi|289752545|ref|ZP_06511923.1| porphobilinogen deaminase [Mycobacterium tuberculosis EAS054] gi|289756587|ref|ZP_06515965.1| porphobilinogen deaminase [Mycobacterium tuberculosis T85] gi|289760632|ref|ZP_06520010.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis GM 1503] gi|294996019|ref|ZP_06801710.1| porphobilinogen deaminase [Mycobacterium tuberculosis 210] gi|297632998|ref|ZP_06950778.1| porphobilinogen deaminase [Mycobacterium tuberculosis KZN 4207] gi|297729974|ref|ZP_06959092.1| porphobilinogen deaminase [Mycobacterium tuberculosis KZN R506] gi|298523991|ref|ZP_07011400.1| porphobilinogen deaminase [Mycobacterium tuberculosis 94_M4241A] gi|313657302|ref|ZP_07814182.1| porphobilinogen deaminase [Mycobacterium tuberculosis KZN V2475] gi|54037281|sp|P64337|HEM3_MYCBO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|54041348|sp|P64336|HEM3_MYCTU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|158512923|sp|A1KFY6|HEM3_MYCBP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|158513358|sp|A5TZP0|HEM3_MYCTA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800256|sp|C1AKJ0|HEM3_MYCBT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|3261607|emb|CAB00957.1| PROBABLE PORPHOBILINOGEN DEAMINASE HEMC (PBG) (HYDROXYMETHYLBILANE SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN SYNTHASE) [Mycobacterium tuberculosis H37Rv] gi|31617278|emb|CAD93385.1| PROBABLE PORPHOBILINOGEN DEAMINASE HEMC (PBG) (HYDROXYMETHYLBILANE SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN SYNTHASE) [Mycobacterium bovis AF2122/97] gi|121492075|emb|CAL70538.1| Probable porphobilinogen deaminase hemC [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599916|gb|EAY58926.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis C] gi|148504431|gb|ABQ72240.1| porphobilinogen deaminase [Mycobacterium tuberculosis H37Ra] gi|148720239|gb|ABR04864.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis F11] gi|224772013|dbj|BAH24819.1| porphobilinogen deaminase [Mycobacterium bovis BCG str. Tokyo 172] gi|289414815|gb|EFD12055.1| porphobilinogen deaminase [Mycobacterium tuberculosis T46] gi|289419014|gb|EFD16215.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis CPHL_A] gi|289437396|gb|EFD19889.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN 605] gi|289537531|gb|EFD42109.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis K85] gi|289542188|gb|EFD45836.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis T17] gi|289684748|gb|EFD52236.1| porphobilinogen deaminase [Mycobacterium tuberculosis 02_1987] gi|289689592|gb|EFD57021.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis T92] gi|289693132|gb|EFD60561.1| porphobilinogen deaminase [Mycobacterium tuberculosis EAS054] gi|289708138|gb|EFD72154.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis GM 1503] gi|289712151|gb|EFD76163.1| porphobilinogen deaminase [Mycobacterium tuberculosis T85] gi|298493785|gb|EFI29079.1| porphobilinogen deaminase [Mycobacterium tuberculosis 94_M4241A] gi|326902339|gb|EGE49272.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis W-148] gi|328457228|gb|AEB02651.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN 4207] Length = 309 Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 89/277 (32%), Positives = 144/277 (51%), Gaps = 18/277 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG--GKGL 63 RIGTR S LA A R +L+ H+ ++ +ST+GDR ++ I G G+ Sbjct: 2 IRIGTRGSLLATTQAATVRDALI----AGGHSAELVTISTEGDR----SMAPIASLGVGV 53 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT + + + +G +D AVHS KD+PT ++A PR D RD ++ +L +L + Sbjct: 54 FTTALREAMEAGLVDAAVHSYKDLPTAADPRFTVAAIPPRNDPRDAVVARDGLTLGELPV 113 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S++GTSS RR A L + + RG ++TRLNK+++ AI++A AG+ RL + Sbjct: 114 GSLVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNKVSSGDLDAIVVARAGLARLGRLD 173 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + E L P+P QGA+ +E + + ++ ++ DT +V ERA LA+L+ Sbjct: 174 DVTETLEPVQMLPAPAQGALAVECRAGDSRLVAVLAELDDADTRAAVTAERALLADLEAG 233 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 C + + A S + DG++F E+S G Sbjct: 234 CSAPVGAIAEVVES--------IDEDGRVFEELSLRG 262 >gi|153814114|ref|ZP_01966782.1| hypothetical protein RUMTOR_00323 [Ruminococcus torques ATCC 27756] gi|317499921|ref|ZP_07958157.1| porphobilinogen deaminase [Lachnospiraceae bacterium 8_1_57FAA] gi|331087856|ref|ZP_08336781.1| porphobilinogen deaminase [Lachnospiraceae bacterium 3_1_46FAA] gi|145848510|gb|EDK25428.1| hypothetical protein RUMTOR_00323 [Ruminococcus torques ATCC 27756] gi|316898638|gb|EFV20673.1| porphobilinogen deaminase [Lachnospiraceae bacterium 8_1_57FAA] gi|330409551|gb|EGG88992.1| porphobilinogen deaminase [Lachnospiraceae bacterium 3_1_46FAA] Length = 307 Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 93/266 (34%), Positives = 138/266 (51%), Gaps = 9/266 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LA+ A + + + + II + T GD+I +R+L +GGKGLF Sbjct: 5 IRIGSRESRLAVKQAEIIKDQIRRCDQTIL--VEIITMKTTGDKILDRSLESVGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+++ L G ID AVHS KDMP + I AY RED RDV I + + + S Sbjct: 63 KELDQALADGRIDLAVHSLKDMPMEESSEFPILAYSRREDPRDVLIYKSEKKEQGTEEGS 122 Query: 126 -------VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 VIGTSS RR + + + RG I+TRL+KLN + A +LA AG+KR Sbjct: 123 ILTKTGAVIGTSSKRRMIQIQKLYPNAVFQGIRGNIQTRLSKLNKEEYDAAVLAAAGVKR 182 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L E VI ++++ P+ GQG + ++ K + ++ + + ER+F+ Sbjct: 183 LNMEAVIGRYFSVDEVIPAAGQGILAVQGRKEFLKDTVWRQYVDDKKSRVQALAERSFIR 242 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGI 264 LDG C S A +A KG+ L G+ Sbjct: 243 VLDGGCTSPSAAYAKVKGNELELTGL 268 >gi|15839903|ref|NP_334940.1| porphobilinogen deaminase [Mycobacterium tuberculosis CDC1551] gi|253797442|ref|YP_003030443.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN 1435] gi|254363472|ref|ZP_04979518.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis str. Haarlem] gi|308231570|ref|ZP_07412948.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu001] gi|308369414|ref|ZP_07417699.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu002] gi|308370431|ref|ZP_07421471.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu003] gi|308371690|ref|ZP_07425840.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu004] gi|308372913|ref|ZP_07430371.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu005] gi|308374024|ref|ZP_07434556.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu006] gi|308375179|ref|ZP_07442991.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu007] gi|308376421|ref|ZP_07438780.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu008] gi|308377443|ref|ZP_07479182.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu009] gi|308378656|ref|ZP_07483377.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu010] gi|308379797|ref|ZP_07487609.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu011] gi|308395586|ref|ZP_07492111.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu012] gi|13880040|gb|AAK44754.1| porphobilinogen deaminase [Mycobacterium tuberculosis CDC1551] gi|134148986|gb|EBA41031.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis str. Haarlem] gi|253318945|gb|ACT23548.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN 1435] gi|308216828|gb|EFO76227.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu001] gi|308327689|gb|EFP16540.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu002] gi|308332040|gb|EFP20891.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu003] gi|308335827|gb|EFP24678.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu004] gi|308339432|gb|EFP28283.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu005] gi|308343307|gb|EFP32158.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu006] gi|308347203|gb|EFP36054.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu007] gi|308351144|gb|EFP39995.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu008] gi|308355775|gb|EFP44626.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu009] gi|308359835|gb|EFP48686.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu010] gi|308363637|gb|EFP52488.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu011] gi|308367292|gb|EFP56143.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu012] gi|323721187|gb|EGB30249.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis CDC1551A] Length = 312 Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 89/277 (32%), Positives = 144/277 (51%), Gaps = 18/277 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG--GKGL 63 RIGTR S LA A R +L+ H+ ++ +ST+GDR ++ I G G+ Sbjct: 5 IRIGTRGSLLATTQAATVRDALI----AGGHSAELVTISTEGDR----SMAPIASLGVGV 56 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT + + + +G +D AVHS KD+PT ++A PR D RD ++ +L +L + Sbjct: 57 FTTALREAMEAGLVDAAVHSYKDLPTAADPRFTVAAIPPRNDPRDAVVARDGLTLGELPV 116 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S++GTSS RR A L + + RG ++TRLNK+++ AI++A AG+ RL + Sbjct: 117 GSLVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNKVSSGDLDAIVVARAGLARLGRLD 176 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + E L P+P QGA+ +E + + ++ ++ DT +V ERA LA+L+ Sbjct: 177 DVTETLEPVQMLPAPAQGALAVECRAGDSRLVAVLAELDDADTRAAVTAERALLADLEAG 236 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 C + + A S + DG++F E+S G Sbjct: 237 CSAPVGAIAEVVES--------IDEDGRVFEELSLRG 265 >gi|312200104|ref|YP_004020165.1| porphobilinogen deaminase [Frankia sp. EuI1c] gi|311231440|gb|ADP84295.1| porphobilinogen deaminase [Frankia sp. EuI1c] Length = 380 Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 96/301 (31%), Positives = 150/301 (49%), Gaps = 43/301 (14%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIGGKGLF 64 R+GTR S LALA + L I + ++ + T+GDR NR ++++G G++ Sbjct: 40 LRLGTRRSALALAQSGMVADELRTRLGI---EVDLVHVVTEGDR--NRAEISQLGSTGVW 94 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L+SGE+D AVHS KD+PT +G+ ++A PRED+RDV +S T ++L L Sbjct: 95 VSALREALLSGEVDLAVHSLKDLPTAPPEGITLAAIPPREDVRDVLVSPTGRTLAQLGPG 154 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGT + RR A L + V+ RG ++TR+ K + + A++LA AG+ RL + Sbjct: 155 ARIGTGAPRRAAQLRALGLGLDVVPIRGNVDTRIKKAIDGEVDAVVLARAGLARLDRLDA 214 Query: 185 IKEILNIEDFPPSPGQGAICIE-----------THVNNPKAQELVK-------------- 219 I E+L E P+PGQGA+ IE V P+ Q V Sbjct: 215 ITELLEPEVMLPAPGQGALAIECVATTLAPLTLLTVGTPEDQGAVTGMSCPVAPGSGVEI 274 Query: 220 --------VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 V++ + +V ERAFLA ++ C + + A L G AS+G+ Sbjct: 275 PLERLLRFVLDDAPSSVAVRAERAFLAAIEAGCTAPVGALAQV----LPARGQAPASEGE 330 Query: 272 I 272 + Sbjct: 331 V 331 >gi|167900391|ref|ZP_02487792.1| porphobilinogen deaminase [Burkholderia pseudomallei 7894] Length = 245 Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 89/229 (38%), Positives = 136/229 (59%), Gaps = 2/229 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+ Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+ Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 +L+++D P+ GQGA+ IE + ++ + +V ERA Sbjct: 194 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAV 242 >gi|84490120|ref|YP_448352.1| porphobilinogen deaminase [Methanosphaera stadtmanae DSM 3091] gi|84373439|gb|ABC57709.1| HemC [Methanosphaera stadtmanae DSM 3091] Length = 290 Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 93/290 (32%), Positives = 154/290 (53%), Gaps = 6/290 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LA +L ++ +I T GD+I N L I KG+FT+E Sbjct: 3 VGTRGSKLATTQTKTVVKALEEITGEEIETKII---KTTGDKIKNSQLYNIDAKGIFTKE 59 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 ++ LI G ID AVHS KD+P++L L I+A RE I +V IS+ S +L ++ + Sbjct: 60 LDTALIDGSIDFAVHSFKDLPSELNDQLTITAIPQREAINEVLISN--YSWDELPENATL 117 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSS+RR+A I RG I+TR+ K+ + A ++A AGI RL ++ IKE Sbjct: 118 GTSSVRREAFCKLHGKKIQTKPIRGNIDTRIRKVEEGEYDATIMALAGINRLGLQEHIKE 177 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + + + P GQGA+ + TH + + +++ +NHED+ E+A L + C+ Sbjct: 178 VFDEQYITPPAGQGALAVMTH-KDSEYNDVISKLNHEDSRIEAMTEKAILETIGVGCQWP 236 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 I + G+ + + +L+ +GK+ +V++ ++ +AIN + +R Sbjct: 237 IGIVSKVDGNNINIHCKLLSPEGKLLADVNKTTDKNNAINTAKVIGTKLR 286 >gi|305433096|ref|ZP_07402252.1| hydroxymethylbilane synthase [Campylobacter coli JV20] gi|304443797|gb|EFM36454.1| hydroxymethylbilane synthase [Campylobacter coli JV20] Length = 308 Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 97/293 (33%), Positives = 148/293 (50%), Gaps = 6/293 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL + L H I + + TKGD + + L +IGGKGL Sbjct: 2 KELVIATRKSQLALWQSEFIADFLNKTHGIA---VRLEGFKTKGDVLLDSPLAKIGGKGL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L Sbjct: 59 FTKELEESMLRNEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGT+SLRRK LL R D+ +I RG + +R+ KL N AI+LA AGIKRL +K Sbjct: 119 GAKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNGDFDAIILAMAGIKRLDLDK 178 Query: 184 VIKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + ++ P+ QGA+ IE+ +++ K + +K +N ++ ER F++ L+ Sbjct: 179 QVNFVYTFSKDELIPAASQGALGIES-IDDEKFLKFLKCLNDDNALIETTIEREFISTLE 237 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 G C+ I A G + I+ DG + R + D G A+ Sbjct: 238 GGCQVPIGINAELLGDEICVRAILGLPDGSEILKEKRMIKKSDFKGFGESLAK 290 >gi|163754811|ref|ZP_02161933.1| porphobilinogen deaminase (hemC) [Kordia algicida OT-1] gi|161325752|gb|EDP97079.1| porphobilinogen deaminase (hemC) [Kordia algicida OT-1] Length = 526 Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 92/268 (34%), Positives = 143/268 (53%), Gaps = 8/268 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LAL A + L + H ++P+ GD + ++ L E+G G+ Sbjct: 3 KRIRIGTRDSELALWQAKVVQEQL----EFLGHKTELVPVKATGDLVLDKPLYELGITGI 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT ++ +++ +ID AVHS KD+PT L KG+ +A L R ++RD + + Sbjct: 59 FTRTLDIAMLNNDIDIAVHSLKDVPTILPKGIVQAAVLKRGNVRDTLVFKNNEEFLS-QR 117 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKRLKKE 182 ++VI T SLRRKA L ++ D RG + TRL KL + + + + A AG+ R+ Sbjct: 118 NAVIATGSLRRKAQWLHRYPTHTIEDLRGNVNTRLQKLADTEHWNGAIFAAAGLGRIGLR 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +E +N+E P+P QGAI I + + + + INHE+T + ER FL L+G Sbjct: 178 P--EESVNLEWMIPAPAQGAIMITALEADEEIRAICAEINHEETEICTSIERKFLNLLEG 235 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270 C + I AY K + G++L++DG Sbjct: 236 GCTAPIGAIAYIKDEVVTLEGVLLSTDG 263 >gi|167737626|ref|ZP_02410400.1| porphobilinogen deaminase [Burkholderia pseudomallei 14] Length = 246 Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 89/229 (38%), Positives = 136/229 (59%), Gaps = 2/229 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+ Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+ Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 +L+++D P+ GQGA+ IE + ++ + +V ERA Sbjct: 194 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAV 242 >gi|195014661|ref|XP_001984055.1| GH15218 [Drosophila grimshawi] gi|193897537|gb|EDV96403.1| GH15218 [Drosophila grimshawi] Length = 612 Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 94/259 (36%), Positives = 144/259 (55%), Gaps = 9/259 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K R+G+R S LAL +T+ + + K+ P I +ST GDR+ N +L +IG K Sbjct: 8 KVIRVGSRKSELAL---IQTKHVIGRLQKLYPKQKFEIHTMSTFGDRVLNVSLPKIGEKS 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119 LFT ++E L +G +D VHS KD+PT L G+ + A L RED RD + + ++ Sbjct: 65 LFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAVGAVLEREDARDALVLRENLKGHTIA 124 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177 +L SVIGTSSLRR A + R D+ V D RG + TRL KL+ ++K I+LA AG+ Sbjct: 125 NLPKGSVIGTSSLRRTAQIRRQYPDLIVCDIRGNLNTRLAKLDAKDSKFAGIILAQAGLV 184 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+FL Sbjct: 185 RMGWMARISQVLEPTDLLYAVGQGALAVECRANDNQVLGMLQKLMCLNTTCRILAERSFL 244 Query: 238 AELDGSCKSAIAGFAYCKG 256 L G C + +A ++ G Sbjct: 245 KTLGGGCSAPVAVWSNLNG 263 >gi|217073904|gb|ACJ85312.1| unknown [Medicago truncatula] Length = 243 Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 85/183 (46%), Positives = 117/183 (63%), Gaps = 4/183 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR L+ H I I+ + T GD+I ++ L +IGGKGL Sbjct: 62 IRIGTRGSPLALAQAHETRDKLIASHTELAEEGAIQIVIIKTTGDKILSQPLADIGGKGL 121 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A SL DL Sbjct: 122 FTKEIDEALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSAASLADLPA 181 Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SVIGT+SLRRK+ +L +SV D FRG ++T L + + + L+ + +RL Sbjct: 182 GSVIGTASLRRKSQILHRYPSLSVQDNFRGNVQTSL-ETSGGGCQSYLIGSSWTERLNMT 240 Query: 183 KVI 185 +++ Sbjct: 241 EML 243 >gi|154496817|ref|ZP_02035513.1| hypothetical protein BACCAP_01110 [Bacteroides capillosus ATCC 29799] gi|150274069|gb|EDN01169.1| hypothetical protein BACCAP_01110 [Bacteroides capillosus ATCC 29799] Length = 287 Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 94/264 (35%), Positives = 140/264 (53%), Gaps = 16/264 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSL-MDVHKI--PPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 RIG+R S LA+ T+S L M+ + P + ++ + T GD+I +RTL ++GGKG Sbjct: 3 LRIGSRESVLAV-----TQSELVMEAIRAFDPSIELELVTMKTTGDKILDRTLDKVGGKG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E++ L+ G +D VHS KD+P + L ++ + RED RD + ++ D + Sbjct: 58 LFVRELDAALLEGRVDITVHSCKDLPMETDPRLPLAGFSKREDPRDALVLPAGKTELDPS 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 L IG +S RR L D+ V RG ++TRL KL+ + A++LA AG+KRL E Sbjct: 118 LP--IGCASRRRAIQLAALYPDMEVAPVRGNVQTRLRKLDEGQYSALVLASAGLKRLGLE 175 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHV--NNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E+ P+ GQG + ++T N P L V + E T ++ ERAF+ L Sbjct: 176 GRIARYFTAEEMIPAAGQGILAVQTRAGENYPC---LAAVTDREGTICAL-AERAFVRML 231 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGI 264 DG C S +A G TL G+ Sbjct: 232 DGGCSSPVAAHGVVDGDTLILTGM 255 >gi|50954011|ref|YP_061299.1| porphobilinogen deaminase [Leifsonia xyli subsp. xyli str. CTCB07] gi|55976376|sp|Q6AHF1|HEM3_LEIXX RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|50950493|gb|AAT88194.1| porphobilinogen deaminase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 329 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 86/270 (31%), Positives = 137/270 (50%), Gaps = 10/270 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR SPLA+A +T++ V + +I ++ ++T GD + +L+E+GG G+F Sbjct: 15 LRVGTRGSPLAVA---QTQAVSAAVARATGFDIELVTVTTHGD-TSRESLSELGGTGVFA 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + L +GE D VHS KD+PT GL + A R D RD + +L + Sbjct: 71 TALRDALRNGECDLVVHSLKDLPTAPAPGLVLGAVPKRADARDTLCARDGLRFGELPEGA 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT S RR A L R + ++D RG ++TRL++++ A++LA AG+ RL + Sbjct: 131 SVGTGSPRRAAQLRAQRPGLDIVDIRGNVDTRLSRVSAGDLDAVVLAAAGLGRLGRLDAA 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNN-----PKAQELVKVINHEDTWDSVNCERAFLAEL 240 + ++ P +PGQGA+ +E + P A+ L V +H T + ERA LA L Sbjct: 191 TDFFSLSTMPTAPGQGALALEVREGDERGRGPIARALAAV-DHATTCAATTAERAVLAGL 249 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 + C + + A L+ V DG Sbjct: 250 EAGCAAPVGATAMIDDGLLFLTATVYRPDG 279 >gi|226361138|ref|YP_002778916.1| porphobilinogen deaminase [Rhodococcus opacus B4] gi|226239623|dbj|BAH49971.1| porphobilinogen deaminase [Rhodococcus opacus B4] Length = 321 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 94/288 (32%), Positives = 148/288 (51%), Gaps = 16/288 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIGTR S LA A R +L+ H+ ++ + TKGD+ + ++ +IG G+ Sbjct: 7 RTLRIGTRGSELATTQAGTVRDALISAG----HDAELVIIKTKGDQ-SMESVEKIG-VGV 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT E+ + L G +D AVHS KD+PT + I+A PRED RD ++ L +L Sbjct: 61 FTAELREALADGRVDVAVHSYKDLPTARDERFTIAAIPPREDPRDALVARDGLVLGELPP 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S +GTS+ RR + L + ++ RG ++ RL K+ + + A++LA AG+ R+ + Sbjct: 121 GSKVGTSAPRRTSQLRALGLGLDILPLRGNLQRRLGKVESGELDAVVLARAGLARIGRLD 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +I E L P+P QGA+ +E N ++ ++ ++ +V ERA LAEL+ Sbjct: 181 LITESLEPVQMLPAPAQGALAVECLSANTALVAILSELDDPNSRAAVTAERALLAELEAG 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 C + + A S L DG+IF E+S G C A G D Sbjct: 241 CTAPVGAIAEVVES--------LDDDGRIFDELSVRG--CAAAIDGSD 278 >gi|124805668|ref|XP_001350505.1| porphobilinogen deaminase [Plasmodium falciparum 3D7] gi|23496628|gb|AAN36185.1| porphobilinogen deaminase [Plasmodium falciparum 3D7] gi|70780284|gb|AAZ08393.1| porphobilinogen deaminase [Plasmodium falciparum] Length = 435 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 106/358 (29%), Positives = 173/358 (48%), Gaps = 59/358 (16%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVII--PLSTKGDRITN-RTLTEIGGKGLF 64 IGTR SPLAL + + R +M K NI + + T GD I + +++ GGKG+F Sbjct: 64 IGTRDSPLALKQSEKVRKKIMSYFKKMNKNINVTFKYIKTTGDNILDSKSVGLYGGKGIF 123 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA-- 122 T+E++++LI+G +D VHS KD+P L +++S +L R+ I D F+S +S+ D+ Sbjct: 124 TKELDEQLINGNVDLCVHSLKDVPILLPNNIELSCFLKRDTINDAFLSIKYKSINDMNTV 183 Query: 123 --------LHSV--------------IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK 160 +H + IGTSSLRR++ + +I V + RG I TR+ K Sbjct: 184 KSVSKTEDIHHINKKDSDHNNDTLCTIGTSSLRRRSQIKNRYKNIYVNNIRGNINTRIEK 243 Query: 161 LNNNKAHAILLAYAGIKRLKKEKVIKEIL---------------------------NIED 193 L N + A+++A GI+RL K+ +K +L NI+ Sbjct: 244 LYNGEVDALIIAMCGIERLIKKANLKHLLKNKEQKNICQPFLLKCNNKKCIDLCHVNIQK 303 Query: 194 FP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248 P+ GQG I + +H N L+K IN++ + ER+FL +DG+C I Sbjct: 304 LNKNLIYPALGQGIIAVTSHKKNYFISSLLKNINNKKSEMMAQIERSFLYHIDGNCMMPI 363 Query: 249 AGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 G+ + +Y + I+ G ++V++ + IG +AA ++ I FN Sbjct: 364 GGYTNMRNEDIYLHVIINDIHGYNKYQVTQKDTLYNYKEIGPNAAIKMKEIIGTEQFN 421 >gi|54027143|ref|YP_121385.1| porphobilinogen deaminase [Nocardia farcinica IFM 10152] gi|61213309|sp|Q5YP70|HEM3_NOCFA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|54018651|dbj|BAD60021.1| putative porphobilinogen deaminase [Nocardia farcinica IFM 10152] Length = 346 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 90/276 (32%), Positives = 143/276 (51%), Gaps = 14/276 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA+ A R +L+ + P +V++ T GD +++ + +IG G+F Sbjct: 9 PLRIGTRGSLLAMTQAGTVRDALIAAGR--PAELVVV--KTPGD-MSSDPVQKIG-VGVF 62 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T + +L +G ID AVHS KD+PT I+A PRED RD ++ L +L Sbjct: 63 TSALRDELAAGTIDLAVHSYKDLPTAPDPRFVIAAIPPREDPRDALVARDGLVLGELPAG 122 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTS+ RR A L + ++ RG +++RL ++ + + A+++A AG+ R+ + V Sbjct: 123 AKVGTSAPRRVAQLRALGLGLDIVPLRGNLDSRLARVTDGELDAVVVARAGLSRIGRTAV 182 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L P+P QGA+ +E + E + ++ T +V ERA LAEL+ C Sbjct: 183 ITEALEPVQMLPAPAQGALAVECRSEDAALIEALAELDDAATRAAVVAERALLAELEAGC 242 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 + + A S L DG+I E+S G Sbjct: 243 TAPVGALAEVVES--------LDDDGRIVEELSLRG 270 >gi|72163131|ref|YP_290788.1| porphobilinogen deaminase [Thermobifida fusca YX] gi|123747085|sp|Q47LA7|HEM3_THEFY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|71916863|gb|AAZ56765.1| hydroxymethylbilane synthase [Thermobifida fusca YX] Length = 320 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 85/273 (31%), Positives = 143/273 (52%), Gaps = 6/273 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M P R+GTR S +A + L +P + ++ +++ GD IT LT++GG Sbjct: 1 MSTTPARLGTRRSTMATNQSRRVAEILTARTGVP---VELVLITSFGD-ITRAHLTQLGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + L++GE++ AVHS KD+PT +G+ ++A R+D RD + D Sbjct: 57 TGVFVSALRDALLAGEVEFAVHSLKDLPTAPTEGIVLAAVTERDDPRDALCARDGLKFAD 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT S RR A L R D+ + RG ETRL K+ + + A++LAYAG+ R+ Sbjct: 117 LPPGATVGTGSPRRVAQLAALRPDLRYVPIRGNAETRLGKVASGELDAVVLAYAGLHRVG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNN-PKAQELVKVINHEDTWDSVNCERAFLAE 239 + + ++ +++ P+PGQGA+ +E + + ++H T +V ER LAE Sbjct: 177 RLDDVTDVFDVDQVLPAPGQGALAVECRTADFTGPLRYLTAVDHLPTRAAVTAERVILAE 236 Query: 240 LDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGK 271 L+ C + + +A + L V+A+DG Sbjct: 237 LEAGCAAPVGAYAEFVAEDRLRLRAAVVATDGS 269 >gi|288920172|ref|ZP_06414488.1| porphobilinogen deaminase [Frankia sp. EUN1f] gi|288348422|gb|EFC82683.1| porphobilinogen deaminase [Frankia sp. EUN1f] Length = 395 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 78/206 (37%), Positives = 120/206 (58%), Gaps = 4/206 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 + ++P R+GTR S LALA + +L + ++P+ T GDR + +++IGG Sbjct: 19 LTRRPLRLGTRRSALALAQSGHVAEALRARLGC---QVELVPIVTDGDR-SQGAISQIGG 74 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L+SGEID AVHS KD+PT GL ++A PR D RDV +S + + L Sbjct: 75 TGVFVSALREALLSGEIDLAVHSLKDLPTATPDGLVLAAVPPRVDTRDVLVSPSGRGLVK 134 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++ IGT + RR A L V+ RG ++TR+ K + + A++LA+AG+ RL Sbjct: 135 LGPNARIGTGAPRRAAQLRAMGLGFDVVPIRGNVDTRIKKAIDGEVDAVILAHAGLARLD 194 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIE 206 + + EI+ E P+PGQGA+ IE Sbjct: 195 RLDAVTEIIPSEVILPAPGQGALAIE 220 >gi|163839970|ref|YP_001624375.1| porphobilinogen deaminase [Renibacterium salmoninarum ATCC 33209] gi|162953446|gb|ABY22961.1| porphobilinogen deaminase [Renibacterium salmoninarum ATCC 33209] Length = 290 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 89/252 (35%), Positives = 145/252 (57%), Gaps = 5/252 (1%) Query: 23 TRSSLM--DVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCA 80 T+S L+ + I + ++ + T GD +T L+++GG G+F + + +++G +D A Sbjct: 4 TQSQLIADQLSAIGGFEVELVQIRTDGDVLTG-PLSQMGGTGVFVTALREAVLNGSVDFA 62 Query: 81 VHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLR 140 VHS KD+PT G++I+A R ++RD S + +SL +LA + +GT S RR A L Sbjct: 63 VHSLKDLPTAAAPGMKIAAIPARAEVRDALCSRSNRSLAELATGAKVGTGSPRRAAQLRA 122 Query: 141 WRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQ 200 R+DI VID RG ++TRL +L N+ A++LA AG+ R+ + I E+ + P+PGQ Sbjct: 123 ARADIEVIDIRGNVDTRLARLENDL-DAVVLAAAGLGRIGRSAAISELFDDAVMLPAPGQ 181 Query: 201 GAICIETHVNNP-KAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTL 259 GA+ +ET ++ P + + I+ D+ +V ERA LA L+ C + + FA KGS L Sbjct: 182 GALAVETALDVPTELAAALAAIDDADSRLAVTAERALLARLEAGCSAPVGAFAQRKGSML 241 Query: 260 YFYGIVLASDGK 271 + + DG Sbjct: 242 RLEACICSLDGS 253 >gi|302521073|ref|ZP_07273415.1| porphobilinogen deaminase [Streptomyces sp. SPB78] gi|318061890|ref|ZP_07980611.1| porphobilinogen deaminase [Streptomyces sp. SA3_actG] gi|318078097|ref|ZP_07985429.1| porphobilinogen deaminase [Streptomyces sp. SA3_actF] gi|302429968|gb|EFL01784.1| porphobilinogen deaminase [Streptomyces sp. SPB78] Length = 323 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 95/297 (31%), Positives = 154/297 (51%), Gaps = 23/297 (7%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIG 59 M KP R+GTR S LA+A + ++ + P + ++ ++T GD T+R L IG Sbjct: 1 MTDKPLRLGTRRSKLAMAQSGLVADAVREATGRP---VELVEITTYGD--TSREHLARIG 55 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G G+F + L+ G++D AVHS KD+PT +GL ++A RED RD I+ +L+ Sbjct: 56 GTGVFVTALRDALLRGDVDFAVHSLKDLPTAQPEGLALAAVPRREDPRDALIARDGLTLE 115 Query: 120 DLALHSVIGTSSLRRKALL-LRWRS---DISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 L + IGT S RR A L R+ DI + RG ++TR+N + + + A++LA AG Sbjct: 116 RLPRGARIGTGSPRRMAQLNAHARAHGLDIETVPIRGNVDTRINFVRDGELDAVVLAAAG 175 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + RL + + L + P+PGQGA+ +E P A+ L + ++ T +V ERA Sbjct: 176 LNRLGRGGEVTAYLASDTVLPAPGQGALAVECP-PGPLAEALAR-LDDPRTRAAVTAERA 233 Query: 236 FLAELDGSCKSAIAGFAYCKGST-----------LYFYGIVLASDGKIFHEVSRNGN 281 LA L+ C + + A G+ + G+V ++DG +++ G+ Sbjct: 234 LLATLEAGCSAPVGALADFTGAPQDQAAQRQTTEMRLRGVVGSTDGSELVQLTTTGH 290 >gi|195127549|ref|XP_002008231.1| GI11928 [Drosophila mojavensis] gi|193919840|gb|EDW18707.1| GI11928 [Drosophila mojavensis] Length = 632 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/264 (36%), Positives = 144/264 (54%), Gaps = 15/264 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGG 60 ++K R+G+R S LAL +T+ + + K+ P I +ST GDR+ N +L +IG Sbjct: 6 KEKVIRVGSRKSELAL---IQTKHVVGRLQKLYPKQKFEIHTMSTFGDRVLNVSLPKIGE 62 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI------SHT 114 K LFT ++E L +G +D VHS KD+PT L G+ + A L RED RD + HT Sbjct: 63 KSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAVGAVLEREDARDALVLREHLKGHT 122 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLA 172 SL SVIGTSSLRR A + R + V D RG + TRL KL+ ++K I+LA Sbjct: 123 IASLPK---GSVIGTSSLRRTAQIRRQYPHLIVCDIRGNLNTRLAKLDAKDSKFSGIILA 179 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 AG+ R+ I ++L D + GQGA+ +E N+ +++ + +T + Sbjct: 180 QAGLVRMGWMNRISQVLEPTDLLYAVGQGALAVECRANDAHVLGMLQRLMCLNTTCRILA 239 Query: 233 ERAFLAELDGSCKSAIAGFAYCKG 256 ER+FL L G C + +A ++ KG Sbjct: 240 ERSFLKTLGGGCSAPVAVWSKLKG 263 >gi|298252253|ref|ZP_06976056.1| porphobilinogen deaminase [Ktedonobacter racemifer DSM 44963] gi|297546845|gb|EFH80713.1| porphobilinogen deaminase [Ktedonobacter racemifer DSM 44963] Length = 334 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/280 (34%), Positives = 146/280 (52%), Gaps = 16/280 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHK-IPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K IGTR S LA+ +T+ + +H+ P I I + T GDR+T+ L+ IGG G Sbjct: 5 KRITIGTRASKLAM---IQTQWIIERIHQQWPGLEIAIEQIRTTGDRVTSVPLSRIGGDG 61 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS----HTAQ-- 116 +F EIE L ID AVHS KD+PT +GL + PRED+RDV +S H + Sbjct: 62 VFVTEIESALQERRIDIAVHSLKDLPTAQPEGLCVLTPGPREDVRDVLVSKGDLHISARG 121 Query: 117 SLKDLALHSV--IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 +L+ + IGT SLRR A + D ++ RG ++TRL KL + AI+LA A Sbjct: 122 TLEGITPGRAPRIGTCSLRRTAQIRHLCPDAEILSLRGNVDTRLRKLEAGEYDAIILAAA 181 Query: 175 GIKRLKKEKVIKEILN---IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 G+ RL + ++ L+ + P+PGQGA+ +E + P +EL+ + + + + Sbjct: 182 GLHRLDLQGTLEGKLSYFPVAQMLPAPGQGALGLEIR-DEPAFRELLAPLQDRNVQAATS 240 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 ER F+ L C +A A+ L G+V + DG+ Sbjct: 241 AERMFMRRLGAGCYLPVAAHAHIIDERLVLRGLVTSLDGQ 280 >gi|227545398|ref|ZP_03975447.1| porphobilinogen deaminase [Lactobacillus reuteri CF48-3A] gi|300908522|ref|ZP_07125985.1| hydroxymethylbilane synthase [Lactobacillus reuteri SD2112] gi|112944692|gb|ABI26362.1| porphobilinogen deaminase [Lactobacillus reuteri] gi|227184680|gb|EEI64751.1| porphobilinogen deaminase [Lactobacillus reuteri CF48-3A] gi|300893929|gb|EFK87287.1| hydroxymethylbilane synthase [Lactobacillus reuteri SD2112] Length = 305 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/278 (34%), Positives = 151/278 (54%), Gaps = 5/278 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LA+A +SL ++ P I + T+GDR +L +IGGKG+F +E Sbjct: 7 VGSRKSKLAMAQTKLVIASLKEL--FPTTQFEIKNVITEGDRNQQASLAKIGGKGVFVKE 64 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLALHSV 126 IE++L + ID AVHS KD+ L L + A+ R D +S SL L + Sbjct: 65 IEEELKNCTIDFAVHSLKDVMPVLPDELTLGAFPKRVSPFDCLVSRQEFTSLDALPHGAR 124 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGT+SLRR+ LL R D+ +I RG I+TRL K++ ++LA AG+ RL + Sbjct: 125 IGTNSLRRQGQLLNVRPDLKIIPIRGNIDTRLKKIDTENLAGVVLAEAGLDRLSIDLSSY 184 Query: 187 EILNIED-FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+++D P+ GQG + IE + + ++++ IN + ++ ER F+ EL GSC Sbjct: 185 HQLSLKDIIVPAVGQGCLAIECRKADERVRKMLDQINDPQSAKCIHIEREFMRELGGSCN 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK-IFHEVSRNGNR 282 I G AY + + F G++ + +G+ + EV+ N+ Sbjct: 245 FPIGGHAYLQDQQIVFDGLIASPNGEHLIKEVAVPANK 282 >gi|291563543|emb|CBL42359.1| porphobilinogen deaminase [butyrate-producing bacterium SS3/4] Length = 827 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 93/264 (35%), Positives = 139/264 (52%), Gaps = 9/264 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 ++++ RIGTR S LAL ++ P ++PL TKGD+I +L GG Sbjct: 4 IKRRTIRIGTRKSRLALVQTKMVAEAIE--ASCPEAKCELVPLMTKGDKILKTSLVAFGG 61 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG F EE E+ L++G+ID AVHSAKDMP L GL I A L RED RDVF++ ++ + Sbjct: 62 KGAFVEEFEQSLLNGDIDLAVHSAKDMPMDLSDGLCIGAVLKREDPRDVFVTVKGRTPER 121 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL- 179 +IGT S RR+ ++ D+ RG ++TRL KL + I+LA AG+ RL Sbjct: 122 SP--RIIGTGSPRRQVQIME-HGDMECRLLRGNVDTRLEKLYQGEYDGIILAAAGLNRLG 178 Query: 180 --KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + E L E F P+ GQG I +E + +++K +N ++ ++ ER L Sbjct: 179 LFNDPRFSFEFLEPEMFLPAGGQGIIAVEAK-KGSEVLKILKKLNDKEAERALFAERKVL 237 Query: 238 AELDGSCKSAIAGFAYCKGSTLYF 261 L C +A+ +A + T + Sbjct: 238 RLLGAGCTAAVGVYAKEENGTFWM 261 >gi|257063872|ref|YP_003143544.1| porphobilinogen deaminase [Slackia heliotrinireducens DSM 20476] gi|256791525|gb|ACV22195.1| porphobilinogen deaminase [Slackia heliotrinireducens DSM 20476] Length = 318 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 96/268 (35%), Positives = 132/268 (49%), Gaps = 5/268 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F IGTR S LAL ++M P + I +T GD L EIG KGLFT Sbjct: 5 FVIGTRGSKLALWQTETVGRAIM--RAFPEIEVEIRVRNTTGDINLASPLAEIGDKGLFT 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 E+E L+ GE+D VHS KD+ T+ +G ++ LPR D RDV + A SL ++ Sbjct: 63 RELETDLLLGEVDMCVHSLKDLETEQPEGCVVAGVLPRADARDVLVCGPRIQAASLAEVP 122 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S IGT S RR A L ++ RG ++TR+ K + +LA AG+KR+ E Sbjct: 123 EGSRIGTGSRRRVAQLKANFPNMVPEGIRGNVDTRVAKAEGDDYEGAILAAAGMKRMGYE 182 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I L IED P+PGQGAI +E N +A ++ + +N T + ER L L+G Sbjct: 183 DHIAAYLPIEDMIPAPGQGAIAMEVLKKNERAYQIARALNDPVTKACTDAERFVLFSLEG 242 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270 C + I + F VL+ G Sbjct: 243 GCSAPIGAHCRLEDGKYIFDACVLSLGG 270 >gi|119713318|gb|ABL97382.1| porphobilinogen deaminase [uncultured marine bacterium EB80_02D08] Length = 300 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 96/268 (35%), Positives = 139/268 (51%), Gaps = 12/268 (4%) Query: 7 RIGTRCSPLALAHAF----ETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +I TR S LA+ A E + S+ DV + +IP++++GD+ TN+ L EIGGKG Sbjct: 4 KIATRQSELAMYQANFVANEIKKSIKDVE------VELIPMTSEGDQ-TNKPLHEIGGKG 56 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E L S ++D AVHS KD+P +L +I RE D+ +S +S D Sbjct: 57 LFISTLESALESNKVDIAVHSLKDVPARLDPKFKIINVFKRESPSDLLLSKDGKSFSDFL 116 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ IGTS RRKA + R DI I RG I TR+NKLN +++A A I RL + Sbjct: 117 ENATIGTSGPRRKAQINYLRPDIKTIPVRGNIATRINKLNEGYFDGLVVAKAAINRLGLQ 176 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + E +I++ P+ QG I E +N + E ++ I N ER+F+A +DG Sbjct: 177 QNSYE-FSIDEMLPAASQGHIATECLSSNKEIIETLESIGDSKELILANAERSFVASMDG 235 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270 C S IA + G VL+ G Sbjct: 236 GCLSPIAILCQNFNDEIKVIGKVLSYKG 263 >gi|118619687|ref|YP_908019.1| porphobilinogen deaminase [Mycobacterium ulcerans Agy99] gi|158512390|sp|A0PW29|HEM3_MYCUA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|118571797|gb|ABL06548.1| porphobilinogen deaminase HemC [Mycobacterium ulcerans Agy99] Length = 314 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 90/275 (32%), Positives = 139/275 (50%), Gaps = 14/275 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H ++ +ST GDR + E G G+FT Sbjct: 2 IRIGTRGSLLATTQAAIVRDALIANG----HAAELVTISTLGDR--SSAPIETLGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + G +D AVHS KD+PT I+A PR+D RD ++ L +L + S Sbjct: 56 TALREAIEDGRVDAAVHSHKDLPTAQDPRFTIAAIPPRQDPRDAVVARDGLVLGELPVGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A + + RG ++TRLN+++N AI++A AG+ RL + + Sbjct: 116 LVGTSSPRRAAQFRALGLGLEIRPLRGNLDTRLNRVSNGDLDAIVVARAGLARLGRLDDV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ IE + + ++ ++ DT +V ERA LAEL+ C Sbjct: 176 TETLEPVQMLPAPAQGALAIECRAGDSRLATVLAELDDADTRAAVTAERALLAELEAGCS 235 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 + + A S + +G++F E+S G Sbjct: 236 APVGAIAEVVES--------IDEEGRVFEELSLRG 262 >gi|256833700|ref|YP_003162427.1| porphobilinogen deaminase [Jonesia denitrificans DSM 20603] gi|256687231|gb|ACV10124.1| porphobilinogen deaminase [Jonesia denitrificans DSM 20603] Length = 344 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 89/261 (34%), Positives = 141/261 (54%), Gaps = 20/261 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA A + T + + + + + + T GD +T +L +GG G+F Sbjct: 4 LRLGTRASALATAQSRATAALIAQATGV---TVDLTHIRTDGDVLTG-SLATMGGAGVFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124 I + L++G+ID AVHS KD+PT +G I +P RE+ +D S +SL L Sbjct: 60 TAIRQALLAGDIDIAVHSLKDLPTTPHEGTTI--IVPERENPQDALCSRHGESLAHLPHG 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL---NNNKAH------AILLAYAG 175 +++GT S RR A LL R D+ ++D RG ++TRL ++ +K H A++LA AG Sbjct: 118 ALVGTGSPRRAAQLLVARPDLRIVDIRGNVDTRLARVGLSTADKPHIRNDLDAVVLAAAG 177 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVN----NPKAQELVKVINHEDTWDSVN 231 ++RL + VI E+L P+PGQGA+ IE + +P ++ ++H+ T +V Sbjct: 178 LRRLGRAHVISELLPPTSMLPAPGQGALAIEVRHDMADHHPSILAGIRTLHHQPTAYAVA 237 Query: 232 CERAFLAELDGSCKSAIAGFA 252 ERA L L+ C + + A Sbjct: 238 AERAVLRHLEAGCAAPVGALA 258 >gi|195376491|ref|XP_002047030.1| GJ12153 [Drosophila virilis] gi|194154188|gb|EDW69372.1| GJ12153 [Drosophila virilis] Length = 618 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 94/261 (36%), Positives = 143/261 (54%), Gaps = 9/261 (3%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGG 60 ++K R+G+R S LAL +T+ + + K+ P I +ST GDR+ N +L +IG Sbjct: 6 KEKVIRVGSRKSELAL---IQTKHVIGRLQKLYPKQKFEIHTMSTFGDRVLNVSLPKIGE 62 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117 K LFT ++E L +G +D VHS KD+PT L G+ + A L RED RD + + + Sbjct: 63 KSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAVGAVLEREDARDALVLRENLKGHT 122 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAG 175 + L SVIGTSSLRR A + R + V D RG + TRL KL+ +K I+LA AG Sbjct: 123 IATLPKGSVIGTSSLRRTAQIRRQYPHLIVCDIRGNLNTRLAKLDAKESKFAGIILAQAG 182 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + R+ I ++L D + GQGA+ +E N+ +++ + +T + ER+ Sbjct: 183 LVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDAHVLTMLQKLMCLNTTCRILAERS 242 Query: 236 FLAELDGSCKSAIAGFAYCKG 256 FL L G C + +A ++ KG Sbjct: 243 FLKTLGGGCSAPVAVWSNLKG 263 >gi|312888384|ref|ZP_07747960.1| porphobilinogen deaminase [Mucilaginibacter paludis DSM 18603] gi|311299218|gb|EFQ76311.1| porphobilinogen deaminase [Mucilaginibacter paludis DSM 18603] Length = 526 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 93/260 (35%), Positives = 142/260 (54%), Gaps = 24/260 (9%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LAL A ++ L + I+ T+GDRI N + ++ GKG FT+E Sbjct: 8 IGTRGSELALWQANFVKNKLAENGIQADLKII----KTQGDRILNLSFDKLEGKGFFTKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPRED-------IRDVFISHTAQSLKD 120 +E++L++G ID AVHS KD+PT+ GL I+A RED ++D H S+K Sbjct: 64 LEEELLAGTIDLAVHSHKDLPTENPPGLTIAAVSEREDPAELLLVLKDCVDVHQKLSVK- 122 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 ++GTSS RRKA LL R D+ + + RG + TR+NKL N AI++A AG+ RL Sbjct: 123 --YGGIVGTSSNRRKAQLLAVRPDLEIDELRGNVPTRINKLRNEDYDAIMIAKAGVVRLG 180 Query: 181 KEKVIKEILNIEDFPPS-----PGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + + E ++E+ PP+ P QG + I+ + + E ++++NH D + + ER+ Sbjct: 181 LD--MSE-FHVEEIPPTELIPAPAQGVLAIQVREADTELFEALQILNHPDVAEELAVERS 237 Query: 236 FLAELDGSCKSAIAGFAYCK 255 L G C + YC+ Sbjct: 238 LLKLFGGGCHLPLG--CYCR 255 >gi|126433281|ref|YP_001068972.1| porphobilinogen deaminase [Mycobacterium sp. JLS] gi|126233081|gb|ABN96481.1| hydroxymethylbilane synthase [Mycobacterium sp. JLS] Length = 314 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 91/276 (32%), Positives = 137/276 (49%), Gaps = 14/276 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA A R +L+ H ++ +ST+GDR + +IG G+F Sbjct: 7 PIRIGTRASLLATTQAGTIRDALIGRG----HAAELVLISTEGDR-NQGPIADIG-VGVF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T + + + G +D AVHS KD+PT + I A RED RD ++ L +L Sbjct: 61 TAALREAIHDGRVDAAVHSYKDLPTAADERFTIPAIPRREDPRDALVARDGLVLGELPAG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S +GTSS RR A L + + RG ++TRLN++ N + I++A AG+ R+ + Sbjct: 121 STVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVGNGELDGIVVARAGLARIGRLGD 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E L P+P QGA+ +E + L+ ++ DT +V ER LAEL+ C Sbjct: 181 VTETLEPVQMLPAPAQGALAVECRAGDTGLIALLAELDDADTRAAVTAERVLLAELEAGC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 + + A S + DG++F EVS G Sbjct: 241 SAPVGAIAEVVES--------IDEDGRVFEEVSLRG 268 >gi|167814759|ref|ZP_02446439.1| porphobilinogen deaminase [Burkholderia pseudomallei 91] Length = 240 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 88/227 (38%), Positives = 135/227 (59%), Gaps = 2/227 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+ Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+ Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 +L+++D P+ GQGA+ IE + ++ + +V ER Sbjct: 194 LLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAER 240 >gi|304315023|ref|YP_003850170.1| porphobilinogen deaminase [Methanothermobacter marburgensis str. Marburg] gi|302588482|gb|ADL58857.1| porphobilinogen deaminase [Methanothermobacter marburgensis str. Marburg] Length = 289 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 96/286 (33%), Positives = 148/286 (51%), Gaps = 6/286 (2%) Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 GTR S LAL +T + + +I I + TKGDRI + L + +GLFT E+ Sbjct: 4 GTRGSRLAL---VQTDHVIDMLSEICGERIERRIIKTKGDRIKDSQLYSMDSRGLFTREL 60 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128 + ++ E+D AVHS KD+P+ L L I+A PRE +V +S +L + +G Sbjct: 61 DIAVLEEEVDFAVHSLKDVPSDLDPELVIAAVPPRESPNEVLVSRF--DWDELPPAAKLG 118 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188 TSSLRR+A + + + RG I+TR+ K+ + HA ++A AG+KRL E IK+ Sbjct: 119 TSSLRREAFCNHHQKNFKMEPLRGNIDTRIRKVMEGEVHATIMAEAGLKRLGLENYIKKR 178 Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248 +E F P+ GQGA+ + T ++ + K I H + V E+ L EL C+ + Sbjct: 179 FTLEYFTPAAGQGALAVITRRDSELMVSIEK-ITHYPSHQEVTAEKTLLRELGAGCQCPL 237 Query: 249 AGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 A + Y ++L DG+I V+ G+ A IG+ AA+ Sbjct: 238 GVIARASDGKINLYAVLLTRDGEILKRVNVKGSVDKAEEIGKKAAK 283 >gi|256820282|ref|YP_003141561.1| porphobilinogen deaminase [Capnocytophaga ochracea DSM 7271] gi|256581865|gb|ACU93000.1| porphobilinogen deaminase [Capnocytophaga ochracea DSM 7271] Length = 288 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 93/266 (34%), Positives = 144/266 (54%), Gaps = 7/266 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A ++ L K + I+ + GD ++ L E+G G+FT Sbjct: 4 IRIGTRDSELALWQAKTVQNQL----KTLGYPTEIVSTKSHGDIELSKPLYEMGVTGIFT 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + ++ L++GEID AVHS KD+PT L +G+ + A L R + DV + S + + + Sbjct: 60 KALDIALLNGEIDIAVHSMKDVPTALPEGIAVGAVLKRGNPHDVLVYKGDLSFLEAEI-A 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 I TSSLRRKA L ++ RG + TRL KL +N + + A AG++R+ K+ Sbjct: 119 TIATSSLRRKAQWLHRYPHHNIESLRGNVNTRLQKLTDNPWNGAIFAAAGLERIN--KLP 176 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ L ++ P+P QGAI + +N Q+ + ++ + T+ + ER FL L+G C Sbjct: 177 EKHLVLDWMLPAPAQGAIVVVVREDNVALQKKLLPLHDDYTYIATQLERDFLRALEGGCT 236 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK 271 + I FA K LYF G + + DGK Sbjct: 237 APIGAFAEFKDDKLYFKGGLWSEDGK 262 >gi|108797657|ref|YP_637854.1| porphobilinogen deaminase [Mycobacterium sp. MCS] gi|119866744|ref|YP_936696.1| porphobilinogen deaminase [Mycobacterium sp. KMS] gi|108768076|gb|ABG06798.1| hydroxymethylbilane synthase [Mycobacterium sp. MCS] gi|119692833|gb|ABL89906.1| hydroxymethylbilane synthase [Mycobacterium sp. KMS] Length = 314 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 91/276 (32%), Positives = 137/276 (49%), Gaps = 14/276 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA A R +L+ H ++ +ST+GDR + +IG G+F Sbjct: 7 PIRIGTRASLLATTQAGTIRDALIARG----HAAELVLISTEGDR-NQGPIADIG-VGVF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T + + + G +D AVHS KD+PT + I A RED RD ++ L +L Sbjct: 61 TAALREAIHDGRVDAAVHSYKDLPTAADERFTIPAIPRREDPRDALVARDGLVLGELPAG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S +GTSS RR A L + + RG ++TRLN++ N + I++A AG+ R+ + Sbjct: 121 STVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVGNGELDGIVVARAGLARIGRLGD 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E L P+P QGA+ +E + L+ ++ DT +V ER LAEL+ C Sbjct: 181 VTETLEPVQMLPAPAQGALAVECRAGDTGLIALLAELDDADTRAAVTAERVLLAELEAGC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 + + A S + DG++F EVS G Sbjct: 241 SAPVGAIAEVVES--------IDEDGRVFEEVSLRG 268 >gi|319956650|ref|YP_004167913.1| hydroxymethylbilane synthase [Nitratifractor salsuginis DSM 16511] gi|319419054|gb|ADV46164.1| hydroxymethylbilane synthase [Nitratifractor salsuginis DSM 16511] Length = 317 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 89/242 (36%), Positives = 140/242 (57%), Gaps = 2/242 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A+ + + P + ++ ++++GD+I +R L +GGKG FT+E Sbjct: 6 IVTRASQLALWQAYHIKDRIEKAR--PELEVELMEITSRGDKILDRPLALVGGKGHFTKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E ++++G AVHS KD+PT + +GL+++A R+D DVF+SH SL+ L +V+ Sbjct: 64 LEDEMLAGRAQMAVHSLKDVPTFIPEGLELAAITERQDQSDVFLSHRFSSLEALPEGAVV 123 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+SLRR+ LL+ R D+ V D RG + TRL KL + AI+LAY G+ RL K I Sbjct: 124 GTTSLRRRMQLLQRRPDLIVKDLRGNVNTRLRKLAEGQYDAIILAYIGLARLDLLKEIPH 183 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + +E P GQ A+ IE + + + L ++ +T ER F+A + C + Sbjct: 184 VQKLEWMIPPMGQAALGIEILSGDEELRHLAMELDDPETHLCTEIEREFVAAVGAGCSAP 243 Query: 248 IA 249 +A Sbjct: 244 VA 245 >gi|256380712|ref|YP_003104372.1| porphobilinogen deaminase [Actinosynnema mirum DSM 43827] gi|255925015|gb|ACU40526.1| porphobilinogen deaminase [Actinosynnema mirum DSM 43827] Length = 313 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 156/308 (50%), Gaps = 17/308 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIGTR S LALA +L + + I+ +ST GDR ++ + EIG G+ Sbjct: 3 RTLRIGTRGSALALAQTGTVAEAL----RAAGAQVEIVTVSTPGDR-SHAPIAEIG-IGV 56 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT + L GE+D AVHS KD+PT L ++A RED RD ++ +L +L Sbjct: 57 FTSALRDALAHGEVDVAVHSYKDLPTAPDTRLSLAAIPQREDPRDALVARDGLTLGELPP 116 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S +GT S RR L + ++ RG I++R+ ++ + + A++LA AGI RL + + Sbjct: 117 GSKVGTGSPRRATQLAALGLGLEILPIRGNIDSRMARVFDGELDAVVLARAGISRLGRVE 176 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDG 242 I E+L+ P+P QGA+ IE V++ + L++ ++ + +V ERA LA L+ Sbjct: 177 NITEVLDPIQMLPAPAQGALAIECRVDDVDTEHLLRSTLDDSASRAAVTAERAMLAALEA 236 Query: 243 SCKSAIAGFAYC------KGSTLY---FYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 C + + A +G+ + G+V A DG + S G+ A +GR A Sbjct: 237 GCSAPVGALADVVEDLDDEGAAVLRISLRGVVAAEDGDLLR-ASATGDLTAAEELGRALA 295 Query: 294 QYIRFISN 301 + +S Sbjct: 296 AELLDLSG 303 >gi|291615715|ref|YP_003518457.1| HemC [Pantoea ananatis LMG 20103] gi|291150745|gb|ADD75329.1| HemC [Pantoea ananatis LMG 20103] Length = 244 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 80/218 (36%), Positives = 120/218 (55%) Query: 72 LISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSS 131 ++ D AVHS KD+P +GL + R+D RD F+S+ S+ +L +VIGTSS Sbjct: 1 MLENRADLAVHSMKDVPVAFPEGLGLVTICQRDDPRDAFVSNHYASIDELPQGAVIGTSS 60 Query: 132 LRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNI 191 LRR+ + R D+ + RG + TRL+KL+ + AI+LA AG+ RL I++ L Sbjct: 61 LRRQCQISARRPDLVIRSLRGNVGTRLSKLDAGEYDAIILAAAGLNRLGLADRIRQPLPA 120 Query: 192 EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGF 251 + P+ GQGA+ IE +++ L++ +NH+DT V ERA L+G C+ I F Sbjct: 121 DISLPAVGQGAVGIECRLDDSTLIALLQALNHDDTAVCVKAERAMNTRLEGGCQVPIGSF 180 Query: 252 AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 A +G L+ G+V A DG + R G R A +G Sbjct: 181 AVLEGDELWLRGLVGAPDGSVMVSGERRGPRDQAEQMG 218 >gi|329936060|ref|ZP_08285860.1| porphobilinogen deaminase [Streptomyces griseoaurantiacus M045] gi|329304538|gb|EGG48416.1| porphobilinogen deaminase [Streptomyces griseoaurantiacus M045] Length = 323 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/311 (31%), Positives = 158/311 (50%), Gaps = 23/311 (7%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIG 59 M ++ R+GTR S LA+A + + ++ +V P + ++ ++T GD T+R L +IG Sbjct: 1 MTEQALRLGTRRSKLAMAQSGQVADAVGEVTGRP---VELVEITTYGD--TSREHLAQIG 55 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G G+F + + L+ GE+D AVHS KD+PT + L ++A RED RDV I+ + Sbjct: 56 GTGVFVAALREALLRGEVDLAVHSLKDLPTTQPEELTLAAVPLREDPRDVLIARDGLAFA 115 Query: 120 DLALHSVIGTSSLRRKALLLRWRSD----ISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 DL + +GT S RR A L + D I + RG I+TR+ + + A++LA AG Sbjct: 116 DLPEGARVGTGSPRRMAQLNAYARDHGTRIETVPIRGNIDTRIGYVRKGELDAVVLAAAG 175 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV-NNPKAQELVKVINHED---TWDSVN 231 + R+ + + + L+++ P+PGQGA+ +E NP L + D T +V Sbjct: 176 LNRIGRTSEVTDFLSVDTVLPAPGQGALAVECRTAGNPADAALAAALAQLDDPFTRAAVT 235 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNG----NR 282 ERA LA L+ C + + A + G+V +DG ++S G Sbjct: 236 AERALLAALEAGCSAPVGALADLLNDGQIDKEMRLRGVVGTTDGSTLVQLSTTGPVPETH 295 Query: 283 CDAINIGRDAA 293 A+ +GR+ A Sbjct: 296 DQAMALGRELA 306 >gi|290958356|ref|YP_003489538.1| hydroxymethylbilane synthase [Streptomyces scabiei 87.22] gi|260647882|emb|CBG70987.1| putative hydroxymethylbilane synthase [Streptomyces scabiei 87.22] Length = 322 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 87/303 (28%), Positives = 155/303 (51%), Gaps = 17/303 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA++ + + + V ++ + ++ ++T GD ++ L +IGG G+ Sbjct: 7 RALRLGTRRSTLAMSQSRQVADA---VRRLTGRPVELVEITTYGD-VSREQLAQIGGTGV 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F + + L+ GE+D AVHS KD+PT L ++A R D RDV ++ + + L Sbjct: 63 FVAALREALLRGEVDFAVHSLKDLPTTYPDELTLAAVPVRADARDVLVARDGLTFEQLPA 122 Query: 124 HSVIGTSSLRRKALLLRWRSD----ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 + +GT S RR A L + I + RG ++TR+ + + A++LA AG+ R+ Sbjct: 123 GARVGTGSSRRMAQLNAYARGHGLTIETVPIRGNVDTRIGYVRKGELDAVVLAAAGLSRI 182 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + + L+++ P+PGQGA+ IE + + + ++ DT +V ER+ LA Sbjct: 183 GRIDEVTDFLSVDTVLPAPGQGALAIECAAADAELIAALAGLDDPDTRAAVTAERSLLAA 242 Query: 240 LDGSCKSAIAGFA--YCKGST---LYFYGIVLASDGKIFHEVSRNG----NRCDAINIGR 290 L+ C + + FA G T + G+V +DG ++S G A+ +GR Sbjct: 243 LEAGCSAPVGAFADLLADGQTVKEMRLRGVVGTTDGSTLVQLSTTGPVPETYDQAMALGR 302 Query: 291 DAA 293 + A Sbjct: 303 ELA 305 >gi|19849545|gb|AAL12221.1| porphobilinogen deaminase [Triticum aestivum] Length = 198 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 77/155 (49%), Positives = 104/155 (67%), Gaps = 2/155 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A +TR L H + I II + T GD I ++ L +IGGKGL Sbjct: 43 IRIGTRGSPLALAQARQTRDELKAAHTELAEDGAIEIIIIKTTGDMILDKPLADIGGKGL 102 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G ID AVHS KD+PT L +G+ + LPRED+RD FI TA++L +L Sbjct: 103 FTKEIDDALLEGSIDIAVHSMKDVPTYLPEGMILPCNLPREDVRDAFICLTAKTLGELPA 162 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRL 158 SVIG++SLRR++ +L + V++FRG ++TRL Sbjct: 163 GSVIGSASLRRQSQILYKYPSLKVVNFRGNVQTRL 197 >gi|317010518|gb|ADU84265.1| porphobilinogen deaminase [Helicobacter pylori SouthAfrica7] Length = 306 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 95/282 (33%), Positives = 147/282 (52%), Gaps = 5/282 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L I ++ T GD+I + L +IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANYIKERLKKECFIESEIQIV---KTTGDKILDAPLNKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L + + Sbjct: 63 LEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITQRADVRDTFLSAQFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR L R D+ RG ++TRL KL + AI+LA AG++RL + + Sbjct: 123 GTTSLRRSMQLKCKRKDLDTESLRGNVQTRLKKLECGEFDAIVLAEAGLRRLNIQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++E+ PS GQGA+ +E ++ L K +N E + + ER F+ L+G C+ Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKSHKHFSTLQK-LNDEKSAFCCHLEREFIKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 + A G + I+ +G+ + G++ A ++ Sbjct: 242 PVGVHASLMGEKVKIQAILGLPNGEEVITKEKQGDKNKAFDL 283 >gi|167844775|ref|ZP_02470283.1| porphobilinogen deaminase [Burkholderia pseudomallei B7210] Length = 222 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 85/199 (42%), Positives = 127/199 (63%), Gaps = 2/199 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+ Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+ Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193 Query: 188 ILNIEDFPPSPGQGAICIE 206 +L+++D P+ GQGA+ IE Sbjct: 194 LLDVDDSLPAAGQGALGIE 212 >gi|269215656|ref|ZP_06159510.1| hydroxymethylbilane synthase [Slackia exigua ATCC 700122] gi|269131143|gb|EEZ62218.1| hydroxymethylbilane synthase [Slackia exigua ATCC 700122] Length = 318 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 92/273 (33%), Positives = 135/273 (49%), Gaps = 5/273 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LAL A + ++ P + I + T GDR L EIG KGLFT++ Sbjct: 8 IGTRGSALALWQAHAVKRAIEASR--PDVSCEIRVIKTTGDRNLATPLAEIGDKGLFTKD 65 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLALH 124 +E L++GE+D VHS KD+PT+L G I+A L R D RDV + A+ L D+ Sbjct: 66 LEAALVAGEVDICVHSMKDVPTELANGCGITAMLERADARDVIVCGPRIQAECLADVPAG 125 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S +GT SLRR A + S I RG ++TR+ K + +LA AG+ R+ Sbjct: 126 SRLGTGSLRRVAQIRAGFSGIVPTPIRGNVDTRIAKACGEEYEGAVLAAAGVTRMGLADR 185 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + + + P+ GQGA+ IE + + + EL I+ T V ER L L+G C Sbjct: 186 IAAYIPVSEIVPAVGQGAVGIEARLGDERVCELCARIDDAATRVCVEAERIVLCALEGGC 245 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277 + + + + +V + DG V+ Sbjct: 246 QVPMGAYMRFDSGDIAADAVVASVDGSRVARVA 278 >gi|310780153|ref|YP_003968485.1| hydroxymethylbilane synthase [Ilyobacter polytropus DSM 2926] gi|309749476|gb|ADO84137.1| hydroxymethylbilane synthase [Ilyobacter polytropus DSM 2926] Length = 303 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 105/299 (35%), Positives = 152/299 (50%), Gaps = 6/299 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD--RITNRTLTEI 58 M+K IGTR S LA+A + RS L + K P I + T GD TN ++ Sbjct: 2 MKKNKVVIGTRGSLLAVAQSKHVRSMLKE--KYPEIEFEIKEIVTTGDVDLRTNWNNSDT 59 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 K LFT+EIEK+L+ G I AVHS KDMP + GL + RED RDV +S + L Sbjct: 60 SLKSLFTKEIEKELLDGTIHLAVHSMKDMPAESPAGLICGSIPEREDYRDVVVSKSNLKL 119 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L SV+GTSSLRR + R D+ + RG I TRL KL AI+LA AG+KR Sbjct: 120 SELPEGSVVGTSSLRRTMAVKEMRPDLVIEPIRGNIHTRLRKLKEENFDAIVLAAAGLKR 179 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E I + L + P+P QGA+CI+ ++ +E++ I ++ + V ER F Sbjct: 180 VGLENEITQYLETHEMMPAPAQGALCIQCKEDDLFIREILSSITEKEVEEVVEIEREFSR 239 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 DG C + + A G + G+ + + ++ G R + ++ + A IR Sbjct: 240 IFDGGCHTPMGCSAEIIGDEICLKGMYCHEE--VVYKGEVTGKREEGKSLAQKLAGIIR 296 >gi|325995520|gb|ADZ50925.1| Porphobilinogen deaminase [Helicobacter pylori 2018] Length = 306 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 96/285 (33%), Positives = 150/285 (52%), Gaps = 5/285 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L + I + TKGD+I + L++IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANHIKERLKKECSMESE---IRIVKTKGDKILDTPLSKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ G ID AVHS KD+P KGL ++ R D+RD +S L L + + Sbjct: 63 LEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTVLSVKFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL + + Sbjct: 123 GTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++++ PS GQGA+ +E N+ L K +N E++ + ER F+ L+G C+ Sbjct: 183 KAFSVKEMIPSMGQGALGVEMLKNHKHFITLQK-LNDEESAFCCHLEREFIKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 I A G + ++ +GK + G++ A ++ R+ Sbjct: 242 PIGVHANLMGDEVKIQAVLGLPNGKEVITKEKQGDKNKAFDLVRE 286 >gi|126662834|ref|ZP_01733833.1| hypothetical protein FBBAL38_05745 [Flavobacteria bacterium BAL38] gi|126626213|gb|EAZ96902.1| hypothetical protein FBBAL38_05745 [Flavobacteria bacterium BAL38] Length = 305 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 94/295 (31%), Positives = 152/295 (51%), Gaps = 12/295 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LAL A + L D+ + II + ++GD I ++ L E+G G+ Sbjct: 3 KIIRIGTRDSELALWQAHTVQKKLNDLG----YKTEIIAVKSQGDIILDKPLYELGITGI 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ ++ +++G++D AVHS KD+PT L G+ +A L R + D+ + +L L Sbjct: 59 FTKTLDIGMLNGQVDIAVHSMKDVPTALPIGIVQAAVLERANTLDILVHKG--NLDFLTS 116 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR--LKK 181 I T SLRR+A L + V+D RG + TR+ KLN ++ + + A AG++R +K Sbjct: 117 SGTIATGSLRRQAQWLNKYPNHKVVDLRGNVNTRMQKLNESEWNGAVFAAAGLERINIKP 176 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I +++ P+P QGA+ + + E + +N +T ER FL L+ Sbjct: 177 ENYI----DLDWMTPAPAQGAMVVVAMEKDTYCTEALAKLNDRETEICTFIERQFLKTLE 232 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 G C + I A + F G++ + +GK H + ++ N N G D A+ I Sbjct: 233 GGCSAPIGALAKFTTENIEFEGVLFSLNGKEKHIIKKSCNFDSYKNFGADCAKEI 287 >gi|167823214|ref|ZP_02454685.1| porphobilinogen deaminase [Burkholderia pseudomallei 9] Length = 233 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 85/199 (42%), Positives = 127/199 (63%), Gaps = 2/199 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+ Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL I+ Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRA 193 Query: 188 ILNIEDFPPSPGQGAICIE 206 +L+++D P+ GQGA+ IE Sbjct: 194 LLDVDDSLPAAGQGALGIE 212 >gi|15611292|ref|NP_222943.1| porphobilinogen deaminase [Helicobacter pylori J99] gi|11133270|sp|Q9ZMJ7|HEM3_HELPJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|4154748|gb|AAD05809.1| PORPHOBILINOGEN DEAMINASE [Helicobacter pylori J99] Length = 306 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 98/289 (33%), Positives = 151/289 (52%), Gaps = 7/289 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK IG+R S LAL A + L + I + T GD+I + L +IGG Sbjct: 1 MEK--LVIGSRGSELALWQANHIKERLKKECSMESE---IRIVKTTGDKILDAPLNKIGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L Sbjct: 56 KGLFTKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMS 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL Sbjct: 116 LPKGAKVGTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLN 175 Query: 181 KEKV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ ++++ PS GQGA+ +E N+ L K +N+E++ + ER F+ Sbjct: 176 VQGAKYRKAFSVKEMIPSMGQGALGVEMLKNHKHFITLQK-LNNEESAFCCHLEREFIKG 234 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 L+G C+ I A G + ++ +GK + G++ A ++ Sbjct: 235 LNGGCQIPIGVHANLMGDEVKIRAVLGLPNGKEVIAKEKQGDKTKAFDL 283 >gi|254382514|ref|ZP_04997873.1| porphobilinogen deaminase 1 [Streptomyces sp. Mg1] gi|194341418|gb|EDX22384.1| porphobilinogen deaminase 1 [Streptomyces sp. Mg1] Length = 322 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 92/308 (29%), Positives = 156/308 (50%), Gaps = 21/308 (6%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P R+GTR S LA++ + + V I + ++ ++T GD ++ L +IGG G+ Sbjct: 7 QPLRLGTRRSKLAMSQSGHVADA---VRAITGRPVELVEITTYGD-VSREHLAQIGGTGV 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F + L+ GEID AVHS KD+PT L I+A PRED RD ++ + + L Sbjct: 63 FVTALRDALLRGEIDFAVHSLKDLPTTQPDDLVIAAMPPREDPRDALVARDGLTFEQLPD 122 Query: 124 HSVIGTSSLRRKALL------LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 + +GT S RR A L L R I + RG ++TR+ + N + A++LA AG+ Sbjct: 123 GARVGTGSPRRMAQLNHAARALGKR--IETVAIRGNVDTRIGFVRNGELDAVVLAAAGLN 180 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + + L+++ P+PGQGA+ +E ++ + + ++ T +V ER+ L Sbjct: 181 RIGRSDEATDFLSVDSVLPAPGQGALAVECLASDAELIAALAELDDPHTRAAVTAERSLL 240 Query: 238 AELDGSCKSAIAGFA--YCKG---STLYFYGIVLASDGKIFHEVSRNG----NRCDAINI 288 A L+ C + + A G + + G+V DG ++S G + DA+ + Sbjct: 241 AALEAGCSAPVGALADLLADGQIVNEMRLRGVVGTLDGTTLVQLSTTGPVPQSYDDAMAL 300 Query: 289 GRDAAQYI 296 GR+ A + Sbjct: 301 GRELADEM 308 >gi|209155902|gb|ACI34183.1| Porphobilinogen deaminase [Salmo salar] Length = 358 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 103/269 (38%), Positives = 142/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA L ++ P ++ I+ +ST GD+I + L++IG K LFT Sbjct: 20 IRMGTRKSQLARIQTDYVAEKLKTLY--PDVHLEIVAMSTIGDKILDTALSKIGEKSLFT 77 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS---LKDLA 122 +E+E L E+D VHS KD+PT L G I A L RE D + H S L L Sbjct: 78 KELENALERNEVDLVVHSLKDLPTTLPNGFTIGAVLQRESPHDAVVLHPKNSGLTLDTLP 137 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH-AILLAYAGIKRLKK 181 SVIGTSSLRR A L + + D RG + TRL KL+ + + AI+LA AG+KR+ Sbjct: 138 DGSVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDEKEDYAAIILAAAGLKRMGW 197 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E + ++L ED + GQGA+ +E + E+V ++H +T ERAFL L+ Sbjct: 198 EARVSQVLGPEDCMYAVGQGALAVEVRARDCDILEMVSTLHHSETVLRCIAERAFLRRLE 257 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K S L G V + DG Sbjct: 258 GGCSVPVAVNTEVKDSVLSLTGAVYSLDG 286 >gi|313835649|gb|EFS73363.1| porphobilinogen deaminase [Propionibacterium acnes HL037PA2] gi|314928321|gb|EFS92152.1| porphobilinogen deaminase [Propionibacterium acnes HL044PA1] gi|314970250|gb|EFT14348.1| porphobilinogen deaminase [Propionibacterium acnes HL037PA3] Length = 337 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 91/267 (34%), Positives = 131/267 (49%), Gaps = 26/267 (9%) Query: 6 FRIGTRCSPLALAH----AFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 R+GTR S LA A RS +DV + ++T+GD T +L +GG Sbjct: 7 IRLGTRASTLATTQSEMVAGMLRSEGLDVD--------LTTITTRGDTSTT-SLAAMGGI 57 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F I L+ G+ D AVHS KD+PT GL I A RED RD ++ +L DL Sbjct: 58 GVFASAIRAALLGGDADIAVHSFKDLPTGRPLGLTIGAVPHREDPRDALVARDGLTLNDL 117 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------NNNKAHAILL 171 + +GT S RR A LL R D+++ID RG ++TRL ++ A++L Sbjct: 118 PQGASVGTGSPRRAAQLLAVRPDLTIIDIRGNVDTRLGRVKGLGHYAQGSGTEDLDAVVL 177 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV---INHEDTWD 228 A +G+ RL V+ E LN P+P QGA+ +E + + +L K I+ T Sbjct: 178 AASGLARLGHSDVVTEFLNPSVMLPAPAQGALAVECRAADSRHGKLAKALAKIDDRPTRL 237 Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCK 255 + ERA L+ L+ C + I A K Sbjct: 238 AATAERAVLSHLEAGCAAPIGALAQLK 264 >gi|297627045|ref|YP_003688808.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922810|emb|CBL57388.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 310 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 83/261 (31%), Positives = 137/261 (52%), Gaps = 5/261 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +++ +IGTR S LA + + T + + V +P +++ T GD ++ L+ Sbjct: 11 DRRVLKIGTRGSRLARSQSAMTAALIEQVTGLPTELVIV---HTDGDDLSI-PLSAPPRP 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G F + L+ GE+D AVHS KD+P + GL + A R D +S A L +L Sbjct: 67 GAFVARLRDVLLDGEVDIAVHSFKDLPFAPMPGLSVVAVPQRAAALDALVSRDALGLDEL 126 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 S +GTSS RR + LLR+R D+ ++ RG ++TR+ K+ + A +LA AG++RL Sbjct: 127 PAGSKVGTSSPRRASALLRYRDDLEIVPIRGNVDTRIRKVREGRVDAAVLAAAGLERLGL 186 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E+++ + P+P QGA+ +E ++P A + + IN DT V ER L + Sbjct: 187 HDEITELIDPKVIVPAPAQGALAVEMRTDDPLAATVAQ-INDHDTRIQVAAERQVLTGVQ 245 Query: 242 GSCKSAIAGFAYCKGSTLYFY 262 +C +AI + +G +L Sbjct: 246 ATCTTAIGAHSVLQGYSLTLM 266 >gi|328908097|gb|EGG27856.1| hydroxymethylbilane synthase [Propionibacterium sp. P08] Length = 334 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 91/267 (34%), Positives = 131/267 (49%), Gaps = 26/267 (9%) Query: 6 FRIGTRCSPLALAH----AFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 R+GTR S LA A RS +DV + ++T+GD T +L +GG Sbjct: 4 IRLGTRASTLATTQSEMVAGMLRSEGLDVD--------LTTITTRGDTSTT-SLAAMGGI 54 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F I L+ G+ D AVHS KD+PT GL I A RED RD ++ +L DL Sbjct: 55 GVFASAIRAALLGGDADIAVHSFKDLPTGRPLGLTIGAVPHREDPRDALVARDGLTLNDL 114 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------NNNKAHAILL 171 + +GT S RR A LL R D+++ID RG ++TRL ++ A++L Sbjct: 115 PQGASVGTGSPRRAAQLLAVRPDLTIIDIRGNVDTRLGRVKGLGHYAQGSGTEDLDAVVL 174 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV---INHEDTWD 228 A +G+ RL V+ E LN P+P QGA+ +E + + +L K I+ T Sbjct: 175 AASGLARLGHSDVVTEFLNPSVMLPAPAQGALAVECRAADSRHGKLAKALAKIDDRPTRL 234 Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCK 255 + ERA L+ L+ C + I A K Sbjct: 235 AATAERAVLSHLEAGCAAPIGALAQLK 261 >gi|301102795|ref|XP_002900484.1| porphobilinogen deaminase [Phytophthora infestans T30-4] gi|262101747|gb|EEY59799.1| porphobilinogen deaminase [Phytophthora infestans T30-4] Length = 361 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 102/310 (32%), Positives = 160/310 (51%), Gaps = 14/310 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG--- 59 K+ + +R S LA+A + L + + P V+ T GD++ +R L+++G Sbjct: 13 KRTIFVSSRKSQLAMAQTNTVIAMLEE--RFPDLQFVVGQEDTVGDQVLDRHLSDLGTTT 70 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---- 115 GLFT+ +E+ L++ AVHS KDMPT L GL ++A RE D + H Sbjct: 71 ASGLFTKSLEEALLAKAASFAVHSLKDMPTTLPDGLVLAAITKRESPEDAAVIHPKHKEK 130 Query: 116 --QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH-AILLA 172 ++L++L SVIGTSSLRR+ALL + RG I+TRL KL+ + + AI++A Sbjct: 131 GIKTLQELPEGSVIGTSSLRREALLRSQFPTFEIKTVRGNIQTRLAKLDEHDDYDAIIVA 190 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 G +R + I EIL ++ F GQG+I +E ++ + E++K I E + Sbjct: 191 ACGFRRGELGDRIDEILPMDTFGYGVGQGSIGVECRADDEETIEMLKTITDEKSAQLCKA 250 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292 ER+ L L+G C+ A+ A TL VL+ DGK + +G R +G+ Sbjct: 251 ERSLLYHLEGGCQIAMGVSATLDEDTLTLNATVLSRDGKESVHETISGPRTQCEELGKQL 310 Query: 293 AQYIRFISNK 302 A+ RF +N+ Sbjct: 311 AE--RFWNNE 318 >gi|726352|gb|AAC44323.1| porphobilinogen deaminase [Yersinia pestis] Length = 184 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 82/179 (45%), Positives = 105/179 (58%), Gaps = 2/179 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRL 177 >gi|253787595|dbj|BAH84857.1| putative porphobilinogen deaminase [Cucumis sativus] Length = 188 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 86/186 (46%), Positives = 119/186 (63%), Gaps = 1/186 (0%) Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EI+ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A S +L S+ Sbjct: 1 EIDDALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSAGSFAELPAGSI 60 Query: 127 IGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGT+SLRRK+ LL + V++ FRG ++TRL KLN A LLA AG++RL + + Sbjct: 61 IGTASLRRKSQLLNRYPSLKVLENFRGNVQTRLRKLNEGVVQATLLALAGLRRLNMTENV 120 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 IL+I++ P+ QGAI I ++ + +NHE+T +V CERAFL LDGSC+ Sbjct: 121 TSILSIDEMLPAVAQGAIGIACRSDDDIMANYLASLNHEETRLAVVCERAFLETLDGSCR 180 Query: 246 SAIAGF 251 + IAG Sbjct: 181 TPIAGI 186 >gi|109947886|ref|YP_665114.1| porphobilinogen deaminase [Helicobacter acinonychis str. Sheeba] gi|123066146|sp|Q17W61|HEM3_HELAH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|109715107|emb|CAK00115.1| hemC [Helicobacter acinonychis str. Sheeba] Length = 306 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 95/281 (33%), Positives = 147/281 (52%), Gaps = 5/281 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L I ++ T GD+I + L +IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANYIKERLKKECFIESEIQIV---KTTGDKILDAPLNKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L + + Sbjct: 63 LEELLLKGTIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSTKFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR L R D+ RG ++TRL KL + + AI+LA AG+ RL + + Sbjct: 123 GTTSLRRSMQLKCKRKDLDTESLRGNVQTRLKKLESGEFDAIILAEAGLCRLNIQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++E+ PS GQGA+ +E ++ L K +N E++ + ER F+ L+G C+ Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKSHKHFTALQK-LNDEESAFCCHLEREFIKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 + A G + I+ +G+ + G++ A + Sbjct: 242 PVGVHASLMGEKVKIQAILGLPNGEEVIAKEKQGDKNKAFD 282 >gi|460692|dbj|BAA05861.1| porphobilinogen deaminase [Clostridium josui] Length = 295 Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 94/294 (31%), Positives = 155/294 (52%), Gaps = 9/294 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIG+R S LA+ + S++ P + +I + T GD+I ++TL +I GKGL Sbjct: 6 KKIRIGSRDSKLAIIQSELIMSAIRKYD--PDIELELITMKTTGDKILDKTLDKIEGKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E++ L + E+D VHS KDMP + L + A RED RD FI Q+ ++ Sbjct: 64 FVKELDNALYNNEVDITVHSYKDMPLEENPELPVVALSKREDPRDAFI--LPQNGEN--- 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 IG+SSLRR+ L RG ++TRL KL++ + AI+LA AGIKRL E Sbjct: 119 GEPIGSSSLRRQLQLKELFPGCKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLES 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I ++++ P+ QG I ++ V + + +K+ + E++ ER F+ E++G Sbjct: 179 RIGRYFSVDEILPAASQGIIAVQGRVG--ENFDFLKLFHSEESLCISLAERTFVREMNGG 236 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C + IA +A +GS + G+ + +GNR + + +G + + ++ Sbjct: 237 CSTPIAAYATIQGSEIILKGLYCNETTGELRKECVSGNRNNPVELGYELVKKMK 290 >gi|288574447|ref|ZP_06392804.1| porphobilinogen deaminase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570188|gb|EFC91745.1| porphobilinogen deaminase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 454 Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 105/292 (35%), Positives = 147/292 (50%), Gaps = 14/292 (4%) Query: 10 TRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIE 69 +R S LA A E +L +P + I +ST GD + L+ GG G F + +E Sbjct: 160 SRKSALARAQTMEAARALAK-KGLP---VEIKTMSTCGDEKQDCHLSAFGGNGAFVKCLE 215 Query: 70 KKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGT 129 + ++ G+ D A+HS KD+P+ L GL++ A LPR DV +S+ L+ L +V+GT Sbjct: 216 EAIMEGKGDGAIHSLKDVPSVLPDGLELVAVLPRASTSDVIVSNHKGGLEGLPAGAVVGT 275 Query: 130 SSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEIL 189 SSLRRKA L R D+ RG + TRL KL + A AI+LA AG+ RL + E Sbjct: 276 SSLRRKAQLAITRPDLDYTLIRGNVNTRLAKLQSGDADAIVLAKAGLDRL---GISPEGA 332 Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 F P+P QG I +E + A+E + INH TW ER L L C A Sbjct: 333 TTLPFLPAPCQGIIAVEARSGSRLAEEF-RAINHRPTWLMALAERELLESLQVGCHVPFA 391 Query: 250 GFAYCKGSTLYFYGIVLASDGK-IFHEVS---RNGNRCDAINIGRDAAQYIR 297 + G L L+ DG+ I E S R+ + DA ++GRD A I+ Sbjct: 392 ALSEWVGGELRLRAQTLSYDGRHIDFEGSLAVRSDD--DARDLGRDVALSIK 441 >gi|167761211|ref|ZP_02433338.1| hypothetical protein CLOSCI_03616 [Clostridium scindens ATCC 35704] gi|167660877|gb|EDS05007.1| hypothetical protein CLOSCI_03616 [Clostridium scindens ATCC 35704] Length = 803 Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 93/286 (32%), Positives = 146/286 (51%), Gaps = 6/286 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LA+ + + H P + ++ + T GD+ + TL +IGGKGLF +E Sbjct: 7 VGSRESRLAIIQTEKVMEHIRRSH--PKIELEMMTMETTGDKRLDVTLDQIGGKGLFVKE 64 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 ++K L+ G ID AVHS KDMP K + I Y PRED+RDV + + +++ +I Sbjct: 65 LDKALLDGRIDLAVHSLKDMPMDESKVIPIVRYSPREDVRDVLV--LPKGVEEWDGRGII 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 G SS RR+ R + RG + TRL KL+ + A++LA AG+KRL E I Sbjct: 123 GCSSFRRRIQAKRLFKEAEFRSVRGNVITRLEKLDRGEYDALILAAAGLKRLGLEYRISR 182 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + ++ P+ GQG + ++ ++ L ED + + ERAF+ LDG C S Sbjct: 183 YFSTDEILPAAGQGTMAVQGRIDM-NYDFLEGYGKKEDAYIA-KGERAFVRYLDGGCSSP 240 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 +A + L G+ + + S++G +A IGR+ A Sbjct: 241 VAAYGEVIDGQLLMKGLYYMEETGNYAIGSKSGPVEEAEKIGRELA 286 >gi|111019045|ref|YP_702017.1| porphobilinogen deaminase [Rhodococcus jostii RHA1] gi|110818575|gb|ABG93859.1| hydroxymethylbilane synthase [Rhodococcus jostii RHA1] Length = 321 Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 93/288 (32%), Positives = 147/288 (51%), Gaps = 16/288 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIGTR S LA A R +L+ H+ ++ + TKGD+ + ++ +IG G+ Sbjct: 7 RTLRIGTRGSELATTQAGTVRDALISAG----HDAELVIIKTKGDQ-SMESVEKIG-VGV 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT E+ + L G +D AVHS KD+PT + I+A PRED RD ++ L +L Sbjct: 61 FTAELREALADGRVDVAVHSYKDLPTAPDERFTIAAIPPREDPRDALVARDGLVLGELPA 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S +GTS+ RR + L + + RG ++ RL K+ + + A++LA AG+ R+ + Sbjct: 121 GSKVGTSAPRRTSQLRALGLGLDIRPLRGNLQRRLGKVESGELDAVVLARAGLARIGRLD 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +I E + P+P QGA+ +E N ++ ++ ++ +V ERA LAEL+ Sbjct: 181 LITESIEPVQMLPAPAQGALAVECLSANTALVAILSELDDPNSRAAVTAERALLAELEAG 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 C + + A S L DG+IF E+S G C A G D Sbjct: 241 CTAPVGAIAEVVES--------LDDDGRIFDELSVRG--CAAAIDGSD 278 >gi|25453441|sp|Q59293|HEM3_CLOJO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 291 Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 94/294 (31%), Positives = 155/294 (52%), Gaps = 9/294 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIG+R S LA+ + S++ P + +I + T GD+I ++TL +I GKGL Sbjct: 2 KKIRIGSRDSKLAIIQSELIMSAIRKYD--PDIELELITMKTTGDKILDKTLDKIEGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E++ L + E+D VHS KDMP + L + A RED RD FI Q+ ++ Sbjct: 60 FVKELDNALYNNEVDITVHSYKDMPLEENPELPVVALSKREDPRDAFI--LPQNGEN--- 114 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 IG+SSLRR+ L RG ++TRL KL++ + AI+LA AGIKRL E Sbjct: 115 GEPIGSSSLRRQLQLKELFPGCKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLES 174 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I ++++ P+ QG I ++ V + + +K+ + E++ ER F+ E++G Sbjct: 175 RIGRYFSVDEILPAASQGIIAVQGRVG--ENFDFLKLFHSEESLCISLAERTFVREMNGG 232 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C + IA +A +GS + G+ + +GNR + + +G + + ++ Sbjct: 233 CSTPIAAYATIQGSEIILKGLYCNETTGELRKECVSGNRNNPVELGYELVKKMK 286 >gi|256371068|ref|YP_003108892.1| porphobilinogen deaminase [Acidimicrobium ferrooxidans DSM 10331] gi|256007652|gb|ACU53219.1| porphobilinogen deaminase [Acidimicrobium ferrooxidans DSM 10331] Length = 291 Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 100/307 (32%), Positives = 149/307 (48%), Gaps = 26/307 (8%) Query: 5 PFRIGTRCSPLALAHAFET-----RSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 P RI TR S LA A R L++VH T GDR +L EIG Sbjct: 3 PVRIATRRSALARWQASLVGERLGRYELVEVH-------------TAGDRDQASSLAEIG 49 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G+G+F +E++ ++ GE D AVHSAKD+PT L ++A L R D RD + L+ Sbjct: 50 GQGVFVKEVQAAVVRGEADIAVHSAKDLPTA-AGPLLLAAVLERADARDAIVGA---RLE 105 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +LA+ + +GTS+ RR A L R D+ V+ RG I TRL ++ + AI++A A ++RL Sbjct: 106 ELAIGARVGTSAPRRAAQLRLLRPDLEVVSIRGNIATRLGRV--GELDAIVMAVAALERL 163 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E+ L E P GQGAI +E + E ++ ++ + + + ERA LA Sbjct: 164 GLEEPPWWPLPEEVLCPQAGQGAIAVECAPDADGLIERLRSLDDDRSRREIEAERAVLAA 223 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 C + A+ GS+L + + DG EV R G D +G A+ +R + Sbjct: 224 FGTGCALPLGARAHADGSSLRLRAVAVDPDGTRQLEVEREG--VDPATLGATVAEVLRRL 281 Query: 300 SNKNVFN 306 + Sbjct: 282 GADALVG 288 >gi|269791662|ref|YP_003316566.1| porphobilinogen deaminase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099297|gb|ACZ18284.1| porphobilinogen deaminase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 307 Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 94/265 (35%), Positives = 137/265 (51%), Gaps = 9/265 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F + TR SPLA+A A + + + H++ ++ +ST GDR R L GG G F Sbjct: 4 FDLLTRSSPLAMAQARMWKDRIESLG----HSVRLLDVSTHGDRDRRRHLACFGGFGAFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + +E +L+SG+ AVHS KD+P+ GL I+ L R DV ++ SL++L + Sbjct: 60 KALEDRLLSGQGHGAVHSLKDVPSVQPDGLVIAGVLERGPRGDVLVTREGLSLEELPSGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS+RR A + R D++V RG + +RL KL H I+LA AG++RL + Sbjct: 120 VIGTSSIRRAAQVRMLRGDLNVECCRGNVHSRLRKLEQGLFHGIVLARAGLERLGIRAPM 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+ F SPGQGA+ +E + L + H TW V ER+FL C Sbjct: 180 AEL----PFITSPGQGAVALEAR-EGSELHLLGARLTHRSTWLEVLAERSFLKAFGMGCS 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270 + +A A TL VL+ +G Sbjct: 235 APVAASAVMDRDTLTLKVQVLSPNG 259 >gi|158518657|sp|Q8TXC8|HEM3_METKA RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 298 Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 87/297 (29%), Positives = 157/297 (52%), Gaps = 10/297 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV--IIPLSTKGDRITNRTLTEIGGKGL 63 R+ TR S LA+ +TR + + + P ++ I+ ++GD + +R L ++G KG+ Sbjct: 5 IRVATRSSRLAI---IQTREVIELLERESPRDVEVEIVKTKSRGDVVRDRPLHKLGEKGV 61 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+++ ++ G+ D AVHSAKD+P+ + + ++A PR D R+ +S LK+L Sbjct: 62 FVKEVDRLVLEGKADIAVHSAKDVPSVVDYPVDVAAVPPRRDPRECLVSRHG-GLKELPR 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSS RR+A +L R D+ V RG ++TR++K+ + A +LA G+ RL Sbjct: 121 GATVGTSSPRRRAQILLERPDLKVEPMRGNVDTRVSKVRRREYDAAVLAKVGLDRLGMTS 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + E+ + E+F P GQGA+ I ++ + + L++V++ E + V E+A + EL Sbjct: 181 EVSEVYDPEEFVPPAGQGALMITCRKDDDRVKRLLEVVDDEKSRVEVETEKAVVRELGVG 240 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 C + + G + + DG H + G+ D + R+A R + Sbjct: 241 CSEPVGVHVRARDGDHVRLVLGLFEEDGSCGHVLKMRGSPEDVV---REAVSQAREV 294 >gi|217031453|ref|ZP_03436958.1| hypothetical protein HPB128_21g11 [Helicobacter pylori B128] gi|298736817|ref|YP_003729347.1| hydroxymethylbilane synthase [Helicobacter pylori B8] gi|216946653|gb|EEC25249.1| hypothetical protein HPB128_21g11 [Helicobacter pylori B128] gi|298356011|emb|CBI66883.1| hydroxymethylbilane synthase [Helicobacter pylori B8] Length = 306 Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 96/282 (34%), Positives = 146/282 (51%), Gaps = 5/282 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L I I + T GD+I + L +IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANHIKERLKKECFIESE---IQIVKTTGDKILDAPLNKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ G ID AVHS KD+P KGL ++ R D RD F+S L L + + Sbjct: 63 LEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADARDTFLSVKFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL + + Sbjct: 123 GTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++E+ PS GQGA+ +E N+ L K +N E++ + ER F+ L+G C+ Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFITLQK-LNDEESAFCCHLEREFIKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 + A G + ++ +GK + G++ A ++ Sbjct: 242 PVGVHANLMGDEVKIQAVLGLPNGKEVITKEKQGDKNKAFDL 283 >gi|309810452|ref|ZP_07704278.1| hydroxymethylbilane synthase [Dermacoccus sp. Ellin185] gi|308435584|gb|EFP59390.1| hydroxymethylbilane synthase [Dermacoccus sp. Ellin185] Length = 327 Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 79/251 (31%), Positives = 130/251 (51%), Gaps = 5/251 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P R+GTR S LA+ + L H H + I+ ++T+GD + +L ++GG Sbjct: 7 DAAPIRLGTRRSHLAMTQSTWVAEQLR-AHG---HAVEIVEITTEGD-VNRASLAQMGGT 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F I + L+ E+D AVHS KD+P GL I+ RED RD ++ +L +L Sbjct: 62 GVFAAAIRRALLEDEVDMAVHSLKDLPVAPEPGLVIAGIPVREDPRDALVARDGLTLGEL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT S RR A L + D RG I+TR+ + + + ++LA AG+ R+++ Sbjct: 122 PAGAVVGTGSPRRAAQLQALGLGFEIRDIRGNIDTRMGYVTSGELDGVILARAGLARVER 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E ++ P+PGQGA+ +E + + + ++ DT +V ERA L L+ Sbjct: 182 TGAISETIDPLQMLPAPGQGALGLECREGDARVIAALAELDDADTRAAVTAERAVLGALE 241 Query: 242 GSCKSAIAGFA 252 C + + A Sbjct: 242 AGCAAPVGALA 252 >gi|20094183|ref|NP_614030.1| porphobilinogen deaminase [Methanopyrus kandleri AV19] gi|19887202|gb|AAM01960.1| Porphobilinogen deaminase [Methanopyrus kandleri AV19] Length = 305 Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 87/297 (29%), Positives = 157/297 (52%), Gaps = 10/297 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV--IIPLSTKGDRITNRTLTEIGGKGL 63 R+ TR S LA+ +TR + + + P ++ I+ ++GD + +R L ++G KG+ Sbjct: 12 IRVATRSSRLAI---IQTREVIELLERESPRDVEVEIVKTKSRGDVVRDRPLHKLGEKGV 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+++ ++ G+ D AVHSAKD+P+ + + ++A PR D R+ +S LK+L Sbjct: 69 FVKEVDRLVLEGKADIAVHSAKDVPSVVDYPVDVAAVPPRRDPRECLVSRHG-GLKELPR 127 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSS RR+A +L R D+ V RG ++TR++K+ + A +LA G+ RL Sbjct: 128 GATVGTSSPRRRAQILLERPDLKVEPMRGNVDTRVSKVRRREYDAAVLAKVGLDRLGMTS 187 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + E+ + E+F P GQGA+ I ++ + + L++V++ E + V E+A + EL Sbjct: 188 EVSEVYDPEEFVPPAGQGALMITCRKDDDRVKRLLEVVDDEKSRVEVETEKAVVRELGVG 247 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 C + + G + + DG H + G+ D + R+A R + Sbjct: 248 CSEPVGVHVRARDGDHVRLVLGLFEEDGSCGHVLKMRGSPEDVV---REAVSQAREV 301 >gi|218513448|ref|ZP_03510288.1| porphobilinogen deaminase [Rhizobium etli 8C-3] Length = 137 Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 62/134 (46%), Positives = 93/134 (69%) Query: 156 TRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215 TRL KL + A LLA AG+KRL K +V+ +IL+ + FPP+P QGAICIE+ + + + Sbjct: 1 TRLRKLEEGQVDATLLALAGLKRLGKVEVLTDILDPDTFPPAPAQGAICIESRIGDSRID 60 Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275 +L+ +N T+D+V+CERAFLA LDGSC++ I G+A C+G + F G+++ DG+ H Sbjct: 61 DLLAAVNDAATFDTVSCERAFLAALDGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHA 120 Query: 276 VSRNGNRCDAINIG 289 V+ +G+R DA +G Sbjct: 121 VTTDGHRRDAAALG 134 >gi|32474491|ref|NP_867485.1| porphobilinogen deaminase [Rhodopirellula baltica SH 1] gi|39931387|sp|Q7UPN0|HEM3_RHOBA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|32445029|emb|CAD75031.1| porphobilinogen deaminase [Rhodopirellula baltica SH 1] Length = 337 Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 99/281 (35%), Positives = 148/281 (52%), Gaps = 20/281 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLA+ A E + L+ H I+PL +KGD R + GLFT Sbjct: 12 LRIATRESPLAMWQA-EHVAKLLKKHGF---QTEIVPLVSKGD-TDMRPIDGTRQVGLFT 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---------SHT-A 115 + I++ L+ E D AVHS KD+PT+ ++A PRE + D + S T A Sbjct: 67 KRIQQALVDDEADVAVHSLKDLPTEPDSRFVLAAVPPRESVLDALVFADNSPHLESQTGA 126 Query: 116 QSLKD-LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 +S D L + +GT S RR A L + R D+ V+ RG ++TRL KLN + AI+LA+A Sbjct: 127 ESPLDYLPQGARVGTGSTRRLAQLKQLRPDLEVLPIRGNVQTRLAKLNAGEFDAIVLAHA 186 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 GI RL+ + + +++ P+PGQGA+ IE ++ A + + +N + ER Sbjct: 187 GILRLEMTDLPHRLFPLDEMIPAPGQGALGIEVRSDDAGAMDAIANLNDAAARLAATAER 246 Query: 235 AFLAELDGSCKSAIAGFAYCK----GSTLYFYGIVLASDGK 271 L+EL G C + IA A + G+ L IV+++DG+ Sbjct: 247 KVLSELHGGCLAPIACHAKLETSNHGTELCLRAIVMSADGE 287 >gi|221126431|ref|XP_002156062.1| PREDICTED: similar to hydroxymethylbilane synthase, partial [Hydra magnipapillata] Length = 418 Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 96/276 (34%), Positives = 145/276 (52%), Gaps = 6/276 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 EK +G+R S LA+ ++L K +I + T GD+I + L +IG K Sbjct: 27 EKTSVVVGSRKSQLAVIQTKSIVAAL--CQKEKDVECIIETMDTLGDKILHIALPKIGEK 84 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118 LFT+++E L +D VHS KD+PT L +G+ IS R+D RD I H + L Sbjct: 85 SLFTKDLELALSEKRVDFLVHSLKDLPTTLPQGMAISTIYKRDDPRDCIIFHPKHNGKKL 144 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH-AILLAYAGIK 177 DL +S+IGTSSLRR A L R + ++ RG + TRL KL + AI+LA AG+ Sbjct: 145 ADLPENSIIGTSSLRRVAQLKRKYNKLTFQSVRGNLNTRLQKLEEESLYDAIVLAKAGVD 204 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + I +IL+ ++ + GQGAI +E ++ ++ + +T + ER F+ Sbjct: 205 RMGWTEKIGQILSEDECLYAIGQGAITVEVRNDDKYTISILAQLTDMETLLACVAERCFM 264 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 L+G C + IA + G+ GIVL +DG F Sbjct: 265 RTLNGGCSTPIACHSQFSGNNYSLRGIVLNADGSRF 300 >gi|56856|emb|CAA29984.1| unnamed protein product [Rattus norvegicus] Length = 344 Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 96/269 (35%), Positives = 139/269 (51%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT Sbjct: 4 IRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKSLFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + ++L+ L Sbjct: 62 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFEGKFIGKTLETLP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRLKK 181 S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 122 EKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDEQLEFSAIILAVAGLQRMGW 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ER FL L+ Sbjct: 182 QNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERDFLRHLE 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K LY G V + DG Sbjct: 242 GGCSVPVAVHTVMKDGQLYLTGGVWSLDG 270 >gi|253579011|ref|ZP_04856282.1| porphobilinogen deaminase [Ruminococcus sp. 5_1_39B_FAA] gi|251849954|gb|EES77913.1| porphobilinogen deaminase [Ruminococcus sp. 5_1_39BFAA] Length = 317 Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 86/263 (32%), Positives = 142/263 (53%), Gaps = 12/263 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHN----IVIIPLSTKGDRITNRTLTEIGGKGL 63 IG+R S LA+ + +S + ++ + I+ + T GD I +RTL ++GGKGL Sbjct: 22 IGSRESKLAVLQSEMVKSYIEQKNREENAGSEITVNILTMKTTGDIILDRTLDKVGGKGL 81 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+++ L+ G+ + +VHS KDMP ++ K L + A+ RED RDV + + + +L Sbjct: 82 FVKELDRALLDGKSNLSVHSLKDMPMEVPKELPLLAFSKREDPRDVLV--LPEGVAELDP 139 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +G SSLRR L + ++ V RG ++TRL KL+ + ++LA AG+KRL E Sbjct: 140 DKPLGCSSLRRTLQLKKLYPEMEVKSIRGNLQTRLRKLDEGEYSGLILAAAGLKRLGLEN 199 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH--EDTWDSVNCERAFLAELD 241 I ++ PS GQG + ++ K ++ + + D W + ERA++ LD Sbjct: 200 RISRYFTPDEMIPSAGQGILAVQGR----KGEDYGYLDGYCDRDAWLAGTAERAYVKYLD 255 Query: 242 GSCKSAIAGFAYCKGSTLYFYGI 264 G C S +A FA G ++ G+ Sbjct: 256 GGCSSPVAAFAEVDGDEIFIRGL 278 >gi|38233015|ref|NP_938782.1| porphobilinogen deaminase [Corynebacterium diphtheriae NCTC 13129] gi|55976429|sp|Q6NJK0|HEM3_CORDI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|38199274|emb|CAE48905.1| Porphobilinogen deaminase [Corynebacterium diphtheriae] Length = 294 Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 86/267 (32%), Positives = 136/267 (50%), Gaps = 11/267 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LA + R L P+ ++ ++T GD N E G G+FT Sbjct: 3 LKIGTRGSLLATTQSGHVRDDLR------PYEAELVIVTTHGD--VNMAPVERIGVGVFT 54 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124 + + ++L +G D AVHS KD+PT+L + +P R D RD I+ SL DL Sbjct: 55 QALREELHTGGCDIAVHSFKDLPTELDPRFHL--VVPKRADFRDCLIARDGLSLADLPAG 112 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 ++IGT + RR + + R D+ + RG I+TR+ K+ + + A++LAYAG+ R+ + Sbjct: 113 ALIGTGAPRRISQIKALRPDVECVPLRGNIDTRMGKVTSGELDAVVLAYAGLTRVGRGDE 172 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ + +DF P+P QGA+ +E ++ A+E + I E ER L L+ C Sbjct: 173 ATQVFDPQDFLPAPAQGALAVECRADDAYAREAIDSICDEQAQVCAVTERVVLNRLEAGC 232 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGK 271 + +A A TL V+A DG Sbjct: 233 TAPVAAHATLNDGTLTLTAAVIALDGS 259 >gi|169762720|ref|XP_001727260.1| porphobilinogen deaminase [Aspergillus oryzae RIB40] gi|83770288|dbj|BAE60421.1| unnamed protein product [Aspergillus oryzae] Length = 330 Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 95/276 (34%), Positives = 145/276 (52%), Gaps = 10/276 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + P RIGTR S LA+ A R+ L + P + I L T GDR L G K Sbjct: 8 QPPLRIGTRRSNLAMVQAEGIRNCLQKIA--PDRSFEIEALRTLGDRDQLTALYNFGAKS 65 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 L+T E+E+KL +GE+D VH KDMPT L +++A PR+D RD I SLK Sbjct: 66 LWTTELEEKLNAGELDVIVHCLKDMPTSLPDSCELAAIPPRDDPRDALIVKAGLPYTSLK 125 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIK 177 L +V+GTSS+RR A L R + + RG +ETRL K++N+ + ++++ AG++ Sbjct: 126 SLPEGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDNSDSEYTCMVMSAAGLE 185 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R+ E I + L +D + GQGA+ +E + K QEL+ + + + + ER+ Sbjct: 186 RVGLEHRISQYLGSKDGGILHAVGQGALGLEIRKGDRKMQELLGQLADQQSTLACLAERS 245 Query: 236 FLAELDGSCKSAIA-GFAYCKGSTLYFYGIVLASDG 270 + L+G C + I + L + IV++ DG Sbjct: 246 LMRTLEGGCSAPIGVETEWISAGALSIHAIVVSLDG 281 >gi|119490987|ref|XP_001263154.1| porphobilinogen deaminase Hem3, putative [Neosartorya fischeri NRRL 181] gi|119411314|gb|EAW21257.1| porphobilinogen deaminase Hem3, putative [Neosartorya fischeri NRRL 181] Length = 331 Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 97/276 (35%), Positives = 144/276 (52%), Gaps = 10/276 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + P RIGTR S LA+A A R SL + +P + I L T GDR L G K Sbjct: 9 QPPLRIGTRRSNLAMAQAEGIRDSLQKI--VPDRSYEIEALRTLGDRDQLTALYSFGAKS 66 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 L+T E+E+KL SGE+D VH KDMPTKL +++A PR+D RD I SLK Sbjct: 67 LWTTELEEKLTSGELDVIVHCLKDMPTKLPDTCELAAIPPRDDPRDALIVKAGLPYTSLK 126 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIK 177 L +V+GTSS+RR A L R + + RG +ETRL K+++ + ++++ AG++ Sbjct: 127 SLPEGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPDSEYTCMVMSAAGLE 186 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R+ + I + L D + GQGA+ +E + K QEL+ + + + + ER+ Sbjct: 187 RVGLKHRISQYLGSRDGGILHAVGQGALGLEIRKGDRKMQELLGQLADQKSTLACLAERS 246 Query: 236 FLAELDGSCKSAIA-GFAYCKGSTLYFYGIVLASDG 270 + L+G C I + L IV++ DG Sbjct: 247 LMRTLEGGCSVPIGVETEWMPSGDLRMNAIVVSLDG 282 >gi|134103372|ref|YP_001109033.1| porphobilinogen deaminase [Saccharopolyspora erythraea NRRL 2338] gi|291004409|ref|ZP_06562382.1| porphobilinogen deaminase [Saccharopolyspora erythraea NRRL 2338] gi|133915995|emb|CAM06108.1| porphobilinogen deaminase [Saccharopolyspora erythraea NRRL 2338] Length = 315 Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 155/307 (50%), Gaps = 20/307 (6%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LA+A S + + + + ++ +ST GDR + + EIG G+ Sbjct: 3 KTLRIGTRGSALAMAQT----SWVAEALEKAGYRTELVTVSTPGDR-SMAPIAEIG-VGV 56 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT + L GE+D AVHS KD+PT L ++A RED RD ++ +L +L Sbjct: 57 FTSALRDALADGEVDVAVHSYKDLPTAPDPRLSLAAVPVREDPRDALVARDGLTLGELPP 116 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+GT S RR L + V D RG ++TR+ K+ + + A++LA AG+ R+ + Sbjct: 117 GSVVGTGSPRRAGQLKALGLGLEVRDIRGNVDTRMRKVTDGELDAVVLARAGLARVGRLA 176 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDG 242 I E L+ P+P QGA+ +E V++ + L++ V++ + + +V ERA LA L+ Sbjct: 177 GITETLDPLQMLPAPAQGALAVECRVDDVDTEHLLQSVLDDQASRVAVAAERAMLAALEA 236 Query: 243 SCKSAIAGFAYC---------KGSTLYFYGIVLASD--GKI-FHEVSRNGNRCDAINIGR 290 C + + A L+ G+V D G++ S G A +GR Sbjct: 237 GCSAPVGALAEVVEDLDADGRVAQRLFVRGVVAVDDASGRVDLLRASVTGETTAAEQLGR 296 Query: 291 D-AAQYI 296 + AAQ + Sbjct: 297 ELAAQLL 303 >gi|296168169|ref|ZP_06850190.1| hydroxymethylbilane synthase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896847|gb|EFG76476.1| hydroxymethylbilane synthase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 317 Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 97/276 (35%), Positives = 141/276 (51%), Gaps = 17/276 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLM-DVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA A R +L+ + H P +VII +T GDR + E G G F Sbjct: 5 IRIGTRGSLLATTQAGVVRDALIANGH---PAELVII--TTAGDR--SSAPIETLGVGAF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T + + + G +D AVHS KD+PT I+A PR D RDV ++ L +L Sbjct: 58 TTALREAINDGRVDAAVHSHKDLPTADDPRFTIAAIPPRNDPRDVVVARDGLVLGELPPG 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + Sbjct: 118 SLVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDD 177 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E L P+P QGA+ +E + A L + ++ DT SV ERA LAEL+ C Sbjct: 178 VTETLEPVQMLPAPAQGALAVECRAGDGLAAVLAE-LDDADTRASVTAERALLAELEAGC 236 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 + + A S L +G++F E+S G Sbjct: 237 SAPVGAIAEVVES--------LDEEGRVFEELSLRG 264 >gi|226305131|ref|YP_002765089.1| porphobilinogen deaminase [Rhodococcus erythropolis PR4] gi|226184246|dbj|BAH32350.1| porphobilinogen deaminase [Rhodococcus erythropolis PR4] Length = 324 Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 102/290 (35%), Positives = 148/290 (51%), Gaps = 22/290 (7%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA A R +L+ P +VII TKGD+ T+ + +IG G+F Sbjct: 11 PLRIGTRGSLLATTQAGTVRDALIAAGH--PAELVII--KTKGDQSTD-PVQKIG-VGVF 64 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T E+ + L+ +D AVHS KD+PT I+A PRED RD ++ L +L Sbjct: 65 TAELREALLDNRVDVAVHSYKDLPTAQDPRFVIAAIPPREDPRDALVARDGLVLGELPAG 124 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S +GTS+ RR + L + ++ RG ++ RL K+ + + A++LA AG+ R+ + Sbjct: 125 SKVGTSAPRRVSQLKALGLGLDIVPLRGNLQRRLGKVESGELDAVILARAGLSRIGLLDL 184 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI-NHED--TWDSVNCERAFLAELD 241 I E + P+P QGA+ +E N EL ++ H+D T +V ERA LAEL+ Sbjct: 185 ITENIEPVQMLPAPAQGALAVECLSAN---VELAAILAEHDDAGTRAAVTAERALLAELE 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 C + + A S L DG+IF E+S G C A G D Sbjct: 242 AGCTAPVGAIAEIVES--------LDDDGRIFDELSVRG--CAAAIDGSD 281 >gi|307187698|gb|EFN72670.1| Porphobilinogen deaminase [Camponotus floridanus] Length = 357 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 103/273 (37%), Positives = 151/273 (55%), Gaps = 7/273 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+G+R S LAL SL ++H P I+ ++TKGD+I +++L +IG K LFT Sbjct: 10 IRVGSRKSELALIQTKHVIQSLKELH--PKKEFEIVTMNTKGDKILDKSLPKIGEKSLFT 67 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH- 124 EE+E L + ID VHS KDMPT L G+ + A L RED RD + K L+ Sbjct: 68 EELEIALENDRIDFVVHSLKDMPTTLPAGMALGAILKREDPRDAVVMSKKFKSKKLSSLP 127 Query: 125 --SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLK 180 S+IGTSSLRR A L R + + + RG + TRL KL+ N AI+LA AG+KR+ Sbjct: 128 KGSIIGTSSLRRSAQLSRNMPHLKIQNIRGNLNTRLKKLDDENGSYAAIILAAAGLKRMG 187 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++L E+ + GQGA+ +E ++ + + L++ + +T CER+FL L Sbjct: 188 WEDRISQLLEPEEALYAIGQGALGVECRESDWEIRSLLEPLFDVETTLRCVCERSFLKTL 247 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 G C + +A + K + L G V + DG+ Sbjct: 248 GGGCSAPVAVSSCLKKNELTITGAVWSLDGQTL 280 >gi|72004296|ref|XP_781025.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115932051|ref|XP_001188143.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 324 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 6/248 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+G+R S LA+ L VH P I+ + T GD I ++ L IG LFT Sbjct: 8 VRVGSRKSELAMIQTNHVVEMLQKVH--PETEFKIVTMETIGDHIQDKPLASIGESNLFT 65 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+EK L E+D VHS KDMP++L + I A RED D + H T S++ + Sbjct: 66 KELEKALALDEVDMLVHSLKDMPSRLPSNMAIGAICEREDPHDALVLHKKLTGISIETMK 125 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH-AILLAYAGIKRLKK 181 SV+GTSS+RR A L R + D RG + TRL KL+ + + ++LA AG+ R+ Sbjct: 126 EGSVLGTSSVRRVAQLKRKFPHLVFKDVRGNLNTRLRKLDEGQVYDGLVLAVAGMMRMGW 185 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I +IL + S QGA+ IE N + EL++ +NH T ER L L+ Sbjct: 186 EHRISQILKPDICKYSVSQGALGIEIKTKNRRMHELLRQLNHVPTLIRCIAERGLLKTLE 245 Query: 242 GSCKSAIA 249 G C + +A Sbjct: 246 GGCSAPVA 253 >gi|317180043|dbj|BAJ57829.1| porphobilinogen deaminase [Helicobacter pylori F32] Length = 306 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/282 (35%), Positives = 152/282 (53%), Gaps = 5/282 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANHIKERLKKECSIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + + Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + + Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++E+ PS GQGA+ +E N+ L K +N E++ + ERAF+ L+G C+ Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFATLQK-LNDEESAFCCHLERAFIKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 I A G + ++ +GK + G++ A+++ Sbjct: 242 PIGVHASLMGDRVKIRAVLGLPNGKEVITKEKQGDKTKALDL 283 >gi|115387533|ref|XP_001211272.1| porphobilinogen deaminase [Aspergillus terreus NIH2624] gi|114195356|gb|EAU37056.1| porphobilinogen deaminase [Aspergillus terreus NIH2624] Length = 342 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 104/291 (35%), Positives = 154/291 (52%), Gaps = 14/291 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K F IGTR S LAL +++L P ++ I T GD+ T L + K Sbjct: 17 KTTFTIGTRKSKLALLQTDLVQAALQKAW--PQYSFRIHSRETAGDQNTTIALRDFTTKN 74 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLK 119 L+T+E+E LI+G++D VHS KD+PT L + L RED RDV + + +SL Sbjct: 75 LWTQELEDLLIAGDVDLIVHSLKDVPTLLPPSCTLGPMLKREDTRDVLVVKKGLSYKSLD 134 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177 DL SV+GTSS+RR A L R + +ID RG I TRL KL+ I+LA AG+ Sbjct: 135 DLPAGSVVGTSSIRRTAQLARRYPHLKIIDVRGNIGTRLAKLDAEDGPFTCIILAAAGLL 194 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 RL + I + L+ ++ + GQGA+ IE ++P E++K I ++T + ER+ Sbjct: 195 RLGLQDRITQYLDSKNGGMLYAVGQGALGIEIRKDDPLMHEMLKNIGDDETTFASLAERS 254 Query: 236 FLAELDGSCKSAI---AGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGN 281 L L+G C + + + + GS+ L IV++ DGK EV +G+ Sbjct: 255 LLRTLEGGCSAPLGVESEWIPSSGSSRKLRMRSIVVSVDGKESAEVEVDGD 305 >gi|313215076|emb|CBY42810.1| unnamed protein product [Oikopleura dioica] Length = 368 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 98/281 (34%), Positives = 150/281 (53%), Gaps = 20/281 (7%) Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 G+R S LA+ +S L + P I I + TKGD++ + L++IG K LFT+E+ Sbjct: 6 GSRKSELAMLQTNFVKSLLKKAN--PKLEIEIEGIVTKGDKVLDVALSKIGEKSLFTKEL 63 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI------SHTAQSLKDLA 122 E L G++ VHS KDMPT L +G+ +S L RE D + +SL L Sbjct: 64 EVALQEGKVQFLVHSLKDMPTTLPEGMVLSTILERESPEDAVVIRKDLADKGIKSLDQLE 123 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------NKAHAILLAYAGI 176 ++IG+SSLRRKA L R + + RG + TRL KL+N + A++LA AG+ Sbjct: 124 KTALIGSSSLRRKAQLKRKYPEFRIESVRGNLNTRLKKLDNVEKSYETEYSALILARAGL 183 Query: 177 KRLKKEKV-----IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 +R+ ++ + E L+ + + GQGA+ IET + K EL+ ++HE+T V Sbjct: 184 ERMARQNETFVGRLSETLDTKTCLYAVGQGALAIETMATDEKTIELLSSLSHEETTLRVV 243 Query: 232 CERAFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGK 271 ER+F+ L+G C + +A + K + L G V + DGK Sbjct: 244 AERSFMKALNGGCSAPVAVESKIKDDNILALTGGVFSLDGK 284 >gi|225706856|gb|ACO09274.1| Porphobilinogen deaminase [Osmerus mordax] Length = 357 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 102/269 (37%), Positives = 142/269 (52%), Gaps = 6/269 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA L ++ P ++ I+ +ST GD+I + L++IG K LFT Sbjct: 19 IRMGTRKSQLARIQTDYVAEKLKTLY--PDVHLEIVAMSTIGDKILDTALSKIGEKSLFT 76 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A L RE+ D + H +L L Sbjct: 77 KELENALERNEVDLVVHSLKDLPTTLPTGFTIGAVLQRENPHDAVVLHPKNAGLTLDALP 136 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH-AILLAYAGIKRLKK 181 SVIGTSSLRR A L + + D RG + TRL KL+ + + AI+LA AG+KR+ Sbjct: 137 SESVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDEKEDYAAIILAAAGLKRMGW 196 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E + +IL +D + GQGA+ IE + E+V ++H +T ERAFL L+ Sbjct: 197 EGRVSQILGPDDCMYAVGQGALAIEVRARDRDILEMVSTLHHPETVLRCIAERAFLKHLE 256 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 G C +A K L G V + DG Sbjct: 257 GGCSVPVAVHTELKDLMLSMTGAVFSLDG 285 >gi|310658305|ref|YP_003936026.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Clostridium sticklandii DSM 519] gi|308825083|emb|CBH21121.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Clostridium sticklandii] Length = 304 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 92/297 (30%), Positives = 156/297 (52%), Gaps = 12/297 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +G+R S LAL +T+ + ++ K+ P+ + I + TKGD+I + L ++ KG+F + Sbjct: 5 VGSRGSQLALT---QTKLIVNELSKLNPNVDFEIKVIKTKGDKIQDIPLDKMNDKGIFVK 61 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS- 125 EIE++LIS EID AVHS KDMPTK+ + L RED RD I L+DL++ Sbjct: 62 EIEEQLISYEIDMAVHSMKDMPTKMDERLVFPVIPKREDSRDALILKNNLKLEDLSMLET 121 Query: 126 -VIGTSSLRRKALLLRWRSDISVIDF---RGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +IGT S RR ++++ +F RG I+TR+NKL+ I+LA +G+KR+ + Sbjct: 122 MIIGTGSKRRS---YQFKASYPKAEFEPIRGNIDTRINKLHTQNLDGIILAASGLKRISR 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I + + P+P QG + ++T N+ + ++ + + ERA+L E++ Sbjct: 179 ENEISHYFDEKTMIPAPCQGILALQTRTNDYQVIAVLSKVEDRCSRIQYIAERAYLEEIE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 G C + + + G + Y + G + G +A +GR A+ ++ Sbjct: 239 GGCHAPVGAYCEINGDKITIYAVYGDEQGNKLIRDNITGATDNADELGRTLAKKMKL 295 >gi|284047314|ref|YP_003397654.1| porphobilinogen deaminase [Conexibacter woesei DSM 14684] gi|283951535|gb|ADB54279.1| porphobilinogen deaminase [Conexibacter woesei DSM 14684] Length = 314 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 85/202 (42%), Positives = 117/202 (57%), Gaps = 13/202 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A S L D + +IP++T GDR R L G K + Sbjct: 4 LRIGTRASALALVQAEHVASLLRDGGA----QVEVIPITTSGDR--GRLL---GDKSRWV 54 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L++ E+D AVHSAKD+P +L G ++ R D RD A SL+ L + Sbjct: 55 KELEAALLADEVDVAVHSAKDVPAELPDGFVLAGVPARADARDALCG--AASLEQLPDGA 112 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR A L R D+ V+ RG ++TRL KL + +A AI+LA AG++RL + I Sbjct: 113 VVGTSSLRRAAELRALRPDLGVVALRGNVDTRLRKLADGQAAAIVLAVAGLERLDRGAAI 172 Query: 186 KEILNIEDFPPSPGQGAICIET 207 +L+ P+PGQGA+ +ET Sbjct: 173 GAVLD--QLVPAPGQGALALET 192 >gi|240171918|ref|ZP_04750577.1| porphobilinogen deaminase [Mycobacterium kansasii ATCC 12478] Length = 317 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 89/275 (32%), Positives = 138/275 (50%), Gaps = 14/275 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H ++ +ST GDR + E G G+FT Sbjct: 2 IRIGTRGSLLATTQAATVRDALIANG----HPAELVTISTAGDR--SSAPIETLGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + G +D AVHS KD+PT I+A PR D RD ++ L +L S Sbjct: 56 TALREAIEDGRVDAAVHSHKDLPTAEDPRFTIAAIPPRNDPRDAVVARDGLVLGELPAGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + + Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDDV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ +E + + ++ ++ DT +V ERA LAEL+ C Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAADHRLAAVLAELDDADTRAAVTAERALLAELEAGCS 235 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 + + A S + +G++F E+S G Sbjct: 236 APVGAIAEVVES--------IDEEGRVFEELSLRG 262 >gi|11498841|ref|NP_070070.1| porphobilinogen deaminase [Archaeoglobus fulgidus DSM 4304] gi|6225498|sp|O29026|HEM3_ARCFU RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|2649337|gb|AAB90000.1| porphobilinogen deaminase (hemC) [Archaeoglobus fulgidus DSM 4304] Length = 289 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 93/294 (31%), Positives = 151/294 (51%), Gaps = 17/294 (5%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LALA + L + +++ I + T GD + ++ L E G G F Sbjct: 5 VGTRGSKLALAQTNKVAERLKERYEVE-----IRIVKTAGDIMKDKPLYEFKGMGAFVRA 59 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 ++ L G++D AVHS KD+P++ ++G ++A + R+ DV IS +L++L +V+ Sbjct: 60 LDTALAEGKVDVAVHSFKDVPSQRVEGTVVAAVIERDSPCDVLISRDGSTLEELDEGAVV 119 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A L R R D+ + RG ++TRL KL AI++A AG+KRL ++ ++ Sbjct: 120 GTSSLRRRAQLSRLRGDLRFENLRGNLDTRLRKLREGNYDAIVVAEAGLKRLGLDREVE- 178 Query: 188 ILNIEDFPPS-----PGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + FPP QG I I T ++LV +N E TW ERA + EL Sbjct: 179 ---YQPFPPEVIVPPANQGIIAIATRKGE---EDLVAFLNDEKTWLEAMVERAVIKELGV 232 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C + +A + I+ ++ ++S++ +A IG+D + I Sbjct: 233 GCAVPVGVYAEAQSRVRLICEILDKKYLRVEEKLSKDTAVEEAAEIGKDLRKEI 286 >gi|195170703|ref|XP_002026151.1| GL16182 [Drosophila persimilis] gi|194111031|gb|EDW33074.1| GL16182 [Drosophila persimilis] Length = 630 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 98/288 (34%), Positives = 147/288 (51%), Gaps = 22/288 (7%) Query: 2 EKKPFRIGTRCSPLAL---AHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 ++K R+G+R S LAL H L + H +ST GDR+ N +L +I Sbjct: 4 QEKVIRVGSRKSELALIQTKHVIGPTPELYLKQRFEIHT-----MSTFGDRVLNVSLPKI 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTA 115 G K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + + Sbjct: 59 GEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFQG 118 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAY 173 ++ L SVIGTSSLRR A + R + V D RG + TRL KL+ +++ I+LA Sbjct: 119 HTIASLPQGSVIGTSSLRRTAQIRRLYPHLIVCDIRGNLNTRLAKLDAADSRFAGIILAQ 178 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG+ R+ I ++L D + GQGA+ +E N+ + +++ + +T + E Sbjct: 179 AGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDVQVLAMLQKLMCLNTTCRILAE 238 Query: 234 RAFLAELDGSCKSAIAGFAYCKGST---------LYFYGIVLASDGKI 272 R+FL L G C + +A ++ +G L G V + DG I Sbjct: 239 RSFLKTLGGGCSAPVAVWSNLQGEPLNANSQDVGLSLTGAVWSLDGAI 286 >gi|296423212|ref|XP_002841149.1| hypothetical protein [Tuber melanosporum Mel28] gi|295637383|emb|CAZ85340.1| unnamed protein product [Tuber melanosporum] Length = 349 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 94/280 (33%), Positives = 147/280 (52%), Gaps = 8/280 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K RIG+R S LAL R SL ++ P N II ++T GD + L G K Sbjct: 28 RKNIRIGSRKSKLALVQTHLVRDSLQAIY--PDTNFEIIAMTTTGDNNQTKPLHNFGAKA 85 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 L+T+E+E L+ +++ VHS KDMPT+L G +I A L RED RD + T +SL+ Sbjct: 86 LWTQELEVLLLEDKLEMIVHSLKDMPTQLPHGCKIGAILEREDPRDALVMKTGSSYKSLE 145 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIK 177 DL SV+GTSS+RR A + + ++ D RG + TRL KL++ + ++LA AG+ Sbjct: 146 DLPEGSVVGTSSVRRSAQIKKRYPHLNFEDVRGNVGTRLAKLDDPASSYTCLILAAAGLI 205 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL + I L+ + GQGA+ +E + ++++V+ H++T ER+ + Sbjct: 206 RLDLGERITGYLSSPCLLHAVGQGALGVEIRDGDEDTAKMLRVLGHKETTLHCLAERSLM 265 Query: 238 AELDGSCKSAIA-GFAYCKGSTLYFYGIVLASDGKIFHEV 276 L+G C I + +V++ DG+ F V Sbjct: 266 RTLEGGCSVPIGVETETATNGQMLMRAVVVSLDGQNFVNV 305 >gi|86131003|ref|ZP_01049602.1| Porphobilinogen deaminase [Dokdonia donghaensis MED134] gi|85818414|gb|EAQ39574.1| Porphobilinogen deaminase [Dokdonia donghaensis MED134] Length = 304 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 94/291 (32%), Positives = 145/291 (49%), Gaps = 11/291 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LAL A + L D H + ++P+ + GD I ++ L E+G G+ Sbjct: 3 KTIRIGTRDSELALWQAKTVQKQLED-HG---YTTELVPVKSTGDLILDKPLYELGITGI 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ ++ +++G +D AVHS KD+PT L G+ +A LPR + D+ + A K Sbjct: 59 FTKTLDVAMLNGTVDIAVHSMKDVPTALPIGIVQAAVLPRAETEDILVHKGAPDYKQ--- 115 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 I T SLRR+A L + D RG + TRL KL + + A AG+KR+ Sbjct: 116 ACTIATGSLRRQAQWLNRYPNHKTTDIRGNVNTRLQKLEESDWTGAIFAKAGLKRI---N 172 Query: 184 VIKEILNIEDFP-PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E + D+ P+P QGA+ + + ++E +N T + ER FL L+G Sbjct: 173 VLPENYEVLDWMIPAPAQGAMLVVAMEEDAFSKEACAKLNDRTTALCTHIEREFLRTLEG 232 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 C + I A + F G++ + DG EV + + +A+ G D A Sbjct: 233 GCTAPIGALAQEIDGAIRFKGVLFSLDGATKIEVEQVVSTENALGFGTDCA 283 >gi|296123437|ref|YP_003631215.1| porphobilinogen deaminase [Planctomyces limnophilus DSM 3776] gi|296015777|gb|ADG69016.1| porphobilinogen deaminase [Planctomyces limnophilus DSM 3776] Length = 318 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 93/271 (34%), Positives = 138/271 (50%), Gaps = 7/271 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LAL A SL + P + ++ ++T GDR+ L + GG+G+FT Sbjct: 4 LRIATRASQLALWQANFVADSLRSLD--PELTVELVHVTTTGDRVQGEPLRQFGGQGVFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS----LKDL 121 E++ L+ G D AVHS KD+PT GL+++A R + D + T S L L Sbjct: 62 REVQAALLEGRADIAVHSLKDLPTVPTAGLELAAVPARAPVADALLLPTGHSGPASLAML 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGT S RR+A LLR R D+ + RG ++TR+ KL+ + ++LA AG+ RL Sbjct: 122 PRGARIGTGSPRRQAQLLRIRPDLVCSEVRGNLDTRIRKLDAGEYEGLILAVAGLSRLGW 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I IL P+ GQGA+ +E + V + T +V+ ERA L L+ Sbjct: 182 SDRISLILAPPTMFPAAGQGALGLECRHGDEATIRWVSQLEDRQTRLAVDAERAVLRTLE 241 Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGK 271 C + + +A K TL+ I++A DG Sbjct: 242 AGCHAPVGTWASWKSPETLHLEAILIAPDGS 272 >gi|327398182|ref|YP_004339051.1| porphobilinogen deaminase [Hippea maritima DSM 10411] gi|327180811|gb|AEA32992.1| porphobilinogen deaminase [Hippea maritima DSM 10411] Length = 299 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 91/268 (33%), Positives = 147/268 (54%), Gaps = 16/268 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K +IGTR S LAL A + L D I+P+ T GD+ T++ L ++GGKG Sbjct: 5 RKQLKIGTRGSKLALWQAEFAKKRLED----KGFECEIVPIKTSGDK-TDKPLYQLGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIEK L+ ID AVHS KDM + + R+ D+F+S L ++ Sbjct: 60 LFIKEIEKALLDKTIDIAVHSLKDMSVFEDERFDFIVF-ERDYWEDIFVSFEGNFL-EIK 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ +GTSSLRR+A LL++R D +D RG ++TRL KL + + AI+++ +G+KRL Sbjct: 118 KNARVGTSSLRRRAELLQYRDDFEFVDLRGNLDTRLKKLRDGEVDAIVVSKSGLKRL--- 174 Query: 183 KVIKE--ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + E + ++ P+ GQG I +E +++ + ++ +K + E T ++ ERAF+ + Sbjct: 175 GLYDEAYMYDLRFATPAAGQGVIAVE-FLSDFEFRDELKQLEDEKTRICIDSERAFVRQF 233 Query: 241 DGSCKSAIAGFAYCKGSTLYF---YGIV 265 + SC I A + + YG V Sbjct: 234 NASCNYPIGALARFEQDEFFMQITYGFV 261 >gi|118472022|ref|YP_885356.1| porphobilinogen deaminase [Mycobacterium smegmatis str. MC2 155] gi|118173309|gb|ABK74205.1| porphobilinogen deaminase [Mycobacterium smegmatis str. MC2 155] Length = 318 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 96/286 (33%), Positives = 143/286 (50%), Gaps = 16/286 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA A R +L+ P +VII ST+GDR + +IG G+FT Sbjct: 9 IRLGTRGSLLATTQAGTVRDALLAAGH--PCELVII--STEGDR-NQGPIADIG-IGVFT 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + G +D AVHS KD+PT + I A RED RD ++ L +L S Sbjct: 63 AALREAIHDGRVDMAVHSYKDLPTASDERFCIPAIPRREDPRDALVARDGLVLGELPTGS 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS RR A L + + RG ++TRLN++ + + I++A AG+ R+ + V+ Sbjct: 123 VIGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVTSGELDGIVVARAGLARIGRLNVV 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ +E + + ++ ++ DT +V ER LAEL+ C Sbjct: 183 TETLEPVQMLPAPAQGALAVECRAGDTELIAILSELDDADTRAAVTAERVLLAELEAGCS 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 + + A S + DG +F E+S G C A G D Sbjct: 243 APVGAIAEVVES--------IDEDGNVFEELSLRG--CAATLDGSD 278 >gi|313227065|emb|CBY22212.1| unnamed protein product [Oikopleura dioica] Length = 382 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 98/281 (34%), Positives = 150/281 (53%), Gaps = 20/281 (7%) Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 G+R S LA+ +S L + P I I + TKGD++ + L++IG K LFT+E+ Sbjct: 6 GSRKSELAMLQTNFVKSLLKKAN--PKLEIEIEGIVTKGDKVLDVALSKIGEKSLFTKEL 63 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI------SHTAQSLKDLA 122 E L G++ VHS KDMPT L +G+ +S L RE D + +SL L Sbjct: 64 EIALQEGKVQFLVHSLKDMPTTLPEGMVLSTILERESPEDAVVIRKDLADKGIKSLDQLE 123 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------NKAHAILLAYAGI 176 ++IG+SSLRRKA L R + + RG + TRL KL+N + A++LA AG+ Sbjct: 124 KTALIGSSSLRRKAQLKRKYPEFRIESVRGNLNTRLKKLDNVEKSYETEYSALILARAGL 183 Query: 177 KRLKKEKV-----IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 +R+ ++ + E L+ + + GQGA+ IET + K EL+ ++HE+T V Sbjct: 184 ERMARQNETFVGRLSETLDTKTCLYAVGQGALAIETMATDEKTIELLSSLSHEETTLRVV 243 Query: 232 CERAFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGK 271 ER+F+ L+G C + +A + K + L G V + DGK Sbjct: 244 AERSFMKALNGGCSAPVAVESKIKDDNILALTGGVFSLDGK 284 >gi|331003909|ref|ZP_08327398.1| porphobilinogen deaminase [Lachnospiraceae oral taxon 107 str. F0167] gi|330411929|gb|EGG91329.1| porphobilinogen deaminase [Lachnospiraceae oral taxon 107 str. F0167] Length = 311 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 99/269 (36%), Positives = 144/269 (53%), Gaps = 24/269 (8%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RIGTR S LALA + +++ + P I IP+ST GD+ + +L EIGGKG Sbjct: 4 KNIIRIGTRKSALALAQSKLVGDAIL--NSFPHIKIEYIPMSTAGDKRLDISLQEIGGKG 61 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV------FISHTAQ 116 LFT+E+E+ LI+G ID AVHSAKD+P + L++ L R + D+ F+ T Sbjct: 62 LFTKELEEALINGNIDLAVHSAKDLPLEFDHRLKLMPVLKRAPVNDILAVKKDFLKET-- 119 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 +K L IGTSS RR+ LL DI +I RG + TR+ K+ +N ++LA AGI Sbjct: 120 DIKTLPEGFRIGTSSKRREKQLLFLNKDIKIIPVRGNVITRIEKIFSNDVDGVILAAAGI 179 Query: 177 KRLK-KEKVIKE---------ILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224 +RLK +K E I+NI +D P+P QG +C E N + + +++ I Sbjct: 180 ERLKANDKYAAEFKDILDKISIINIREKDILPAPAQGILCAEYA--NDEMETILEKIQDG 237 Query: 225 DTWDSVNCERAFLAELDGSCKSAIAGFAY 253 + ER +LA L C ++ + Y Sbjct: 238 ECNTLFFAERKYLAVLQADCHTSAGIYIY 266 >gi|217077158|ref|YP_002334874.1| porphobilinogen deaminase [Thermosipho africanus TCF52B] gi|217037011|gb|ACJ75533.1| porphobilinogen deaminase [Thermosipho africanus TCF52B] Length = 280 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 98/250 (39%), Positives = 137/250 (54%), Gaps = 10/250 (4%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 ++GTR S LAL L K+ + +IP+ TKGD I + + EIGGKG+F Sbjct: 4 KVGTRGSKLALIQTNMVVERLK--SKLSNVSFEVIPIKTKGD-IVKKPVGEIGGKGVFVS 60 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 +IEK L++GEID A+HS KDMP+K+ GL +++ L RED RDVF+ L L + Sbjct: 61 DIEKLLLNGEIDIAIHSMKDMPSKIPDGLYLTSVLKREDARDVFVGKKDFFL--LESGAK 118 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGTSS RR L R DI ++ RG ++TRL ++ + I+LA AG+KRL EK I Sbjct: 119 IGTSSKRRMLQLSILRPDIEIVPIRGNVDTRLKRI--GELDGIVLAAAGLKRLGLEKKIT 176 Query: 187 EILNIEDFPPSPGQGAICIE-THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +IE P+P QG + +E T P +++ I DT ER L+ C Sbjct: 177 NYFSIEQVVPAPCQGILALEFTSKFLPLFEKVKDEIVDPDTEFVSKIERKVLSISGFDCN 236 Query: 246 SAIAGFAYCK 255 + GF YC+ Sbjct: 237 TPF-GF-YCE 244 >gi|289811310|ref|ZP_06541939.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 235 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 78/209 (37%), Positives = 111/209 (53%) Query: 81 VHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLR 140 +HS KD+P GL + RED RD F+S+ SL DL S++GTSSLRR+ L Sbjct: 1 MHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAE 60 Query: 141 WRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQ 200 R D+ + RG + TRL KL+N AI+LA AG+KRL E I+ L + P+ GQ Sbjct: 61 RRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTALPPDVSLPAVGQ 120 Query: 201 GAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY 260 GA+ IE +++ + Q L+ +NH T V ERA L+G C+ I +A ++ Sbjct: 121 GAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGCQVPIGSYAEIINGEIW 180 Query: 261 FYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +V A DG + R G+ A +G Sbjct: 181 LRALVGAPDGSVMVRGERRGSPEQAEQMG 209 >gi|260061130|ref|YP_003194210.1| porphobilinogen deaminase [Robiginitalea biformata HTCC2501] gi|88785262|gb|EAR16431.1| porphobilinogen deaminase [Robiginitalea biformata HTCC2501] Length = 315 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 95/296 (32%), Positives = 145/296 (48%), Gaps = 13/296 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIGTR S LAL A R L + H ++P+ + GD + ++ L E+G G+ Sbjct: 3 RALRIGTRDSELALWQAQTVRDRL----EAAGHRAELVPVKSTGDLVLDKPLYELGITGI 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ ++ L+ +ID AVHS KD+PT L +G+ +A L R RDV + + L L Sbjct: 59 FTKTLDVALLREDIDLAVHSMKDVPTALPEGICQAAVLERASARDVLVH---KGLGFLDG 115 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 I T SLRRKA L V RG + TRL L N + A AG++R+ Sbjct: 116 PGTIATGSLRRKAQWLNRYPAHQVTGLRGNVNTRLKLLRENSWDGAIFAQAGLERIGLLP 175 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 E L+ P+P QGA+ + ++ A+E + ++HE + V ER FL L+G Sbjct: 176 DNAEPLDW--MLPAPAQGAMLVVARTSDTAAREAARPLHHEQSALEVAVEREFLRTLEGG 233 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG----RDAAQY 295 C + I + L+ G + + DGK V+R+ +A G +DA ++ Sbjct: 234 CSAPIGARVHAADGQLHLEGGLFSLDGKKAFRVTRHTGSLEAGGTGDARFQDAGEF 289 >gi|261417417|ref|YP_003251100.1| porphobilinogen deaminase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373873|gb|ACX76618.1| porphobilinogen deaminase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 351 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 87/277 (31%), Positives = 140/277 (50%), Gaps = 28/277 (10%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-----------NIVIIPLSTKGDR 49 M RI TR S LALA +++ + + + ++ ++T+GDR Sbjct: 1 MSDLKLRIATRKSALALAQTTMAADAIVAANSVIGNAADSNNARDSLTYELVSMTTEGDR 60 Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109 +++L GGKG+F +E+E L+ G D A+HS KDMP ++L +++A L RED RD Sbjct: 61 RLDKSLASFGGKGVFIKELEIALLEGRADIAIHSLKDMPAEVLPQFKLAAVLKREDPRDA 120 Query: 110 FISHTAQS---LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA 166 F+S + DL + +GT S+RR L R D+ + RG I+TR+ KL + Sbjct: 121 FLSRGGSAGIRFMDLPAGARVGTGSIRRVVQLKALRPDLEYVPIRGNIQTRIGKL--AEL 178 Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE---------- 216 ++LA AG+KR+ + E + E P+ GQG + IET +N+ QE Sbjct: 179 DGVVLAAAGLKRMGLADQVTEYFSTEQMLPASGQGILAIET-LNDATVQESRVTGRADLA 237 Query: 217 -LVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252 ++ +N T+ + E A+L L+ C+ +A FA Sbjct: 238 QILARVNDVATYCIASAEMAYLKALNAGCQFPVASFA 274 >gi|302325361|gb|ADL24562.1| hydroxymethylbilane synthase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 351 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 87/277 (31%), Positives = 140/277 (50%), Gaps = 28/277 (10%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-----------NIVIIPLSTKGDR 49 M RI TR S LALA +++ + + + ++ ++T+GDR Sbjct: 1 MSDLKLRIATRKSALALAQTTMVADAIVAANSVIGNAADSNNARDSLTYELVSMTTEGDR 60 Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109 +++L GGKG+F +E+E L+ G D A+HS KDMP ++L +++A L RED RD Sbjct: 61 RLDKSLASFGGKGVFIKELEIALLEGRADIAIHSLKDMPAEVLPQFKLAAVLKREDPRDA 120 Query: 110 FISHTAQS---LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA 166 F+S + DL + +GT S+RR L R D+ + RG I+TR+ KL + Sbjct: 121 FLSRGGSAGIRFMDLPAGARVGTGSIRRVVQLKALRPDLEYVPIRGNIQTRIGKL--AEL 178 Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE---------- 216 ++LA AG+KR+ + E + E P+ GQG + IET +N+ QE Sbjct: 179 DGVVLAAAGLKRMGLADQVTEYFSTEQMLPASGQGILAIET-LNDATVQESRVTGRADLA 237 Query: 217 -LVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252 ++ +N T+ + E A+L L+ C+ +A FA Sbjct: 238 QILARVNDVATYCIASAEMAYLKALNAGCQFPVASFA 274 >gi|86133880|ref|ZP_01052462.1| Porphobilinogen deaminase [Polaribacter sp. MED152] gi|85820743|gb|EAQ41890.1| Porphobilinogen deaminase [Polaribacter sp. MED152] Length = 530 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 97/297 (32%), Positives = 151/297 (50%), Gaps = 10/297 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K RIGTR S LAL A + R L ++ + I+P+ + GD I ++ L E+G G Sbjct: 2 QKTIRIGTRESQLALWQANKVRKQLEELG----YETEIVPIKSTGDIILDKPLYELGITG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT+ ++ L++ +ID AVHS KD+PT L +G+ A L R + D+ + + Sbjct: 58 IFTKNLDIALLNEDIDIAVHSLKDVPTALPEGIMQGAVLKRANYSDLLVLKDTEEFFGQP 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181 +I T SLRRKA+ L V D RG + TRL+KL N++ + + A AG++RL Sbjct: 118 -GGIIATGSLRRKAMWLNRYPTHKVEDLRGNVNTRLSKLENSETWNGAIFAAAGLERLGL 176 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + K + + P+P QGAI + + + + +NH +T V ER FL L+ Sbjct: 177 RE--KGAIPLTWMIPAPAQGAIMLACLEKDQFVIDACEQLNHYETKVCVGIEREFLRLLE 234 Query: 242 GSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 G C + I AY K + F GI+L DG V++ + +D A Y+ Sbjct: 235 GGCTAPIGALAYVDEKTQEINFKGILLKRDGSKKITVTKTAKLGSHRYLAKDCADYV 291 >gi|229490699|ref|ZP_04384537.1| porphobilinogen deaminase [Rhodococcus erythropolis SK121] gi|229322519|gb|EEN88302.1| porphobilinogen deaminase [Rhodococcus erythropolis SK121] Length = 324 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 101/290 (34%), Positives = 147/290 (50%), Gaps = 22/290 (7%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA A R +L+ P +VII TKGD+ T+ + +IG G+F Sbjct: 11 PLRIGTRGSLLATTQAGTVRDALIAAGH--PAELVII--KTKGDQSTD-PVQKIG-VGVF 64 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T E+ + L+ +D AVHS KD+PT I+A PRED RD ++ L +L Sbjct: 65 TAELREALVDNRVDVAVHSYKDLPTAQDPRFVIAAIPPREDPRDALVARDGLVLGELPAG 124 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S +GTS+ RR + L + ++ RG ++ RL K+ + + A++LA AG+ R+ + Sbjct: 125 SKVGTSAPRRVSQLKALGLGLDIVPLRGNLQRRLGKVESGELDAVILARAGLSRIGLLDL 184 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI-NHED--TWDSVNCERAFLAELD 241 I E + P+P QGA+ +E N EL ++ H+D T +V ERA LA L+ Sbjct: 185 ITENIEPVQMLPAPAQGALAVECLSAN---AELAAILAEHDDAGTRAAVTAERALLAGLE 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 C + + A S L DG+IF E+S G C A G D Sbjct: 242 AGCTAPVGAIAEIVES--------LDDDGRIFDELSVRG--CAAAIDGSD 281 >gi|255949632|ref|XP_002565583.1| Pc22g16690 [Penicillium chrysogenum Wisconsin 54-1255] gi|211592600|emb|CAP98957.1| Pc22g16690 [Penicillium chrysogenum Wisconsin 54-1255] Length = 330 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 95/274 (34%), Positives = 147/274 (53%), Gaps = 10/274 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA+ A R SL + P + I L T GDR L + G K L+ Sbjct: 10 PLRIGTRRSNLAVVQAEGIRDSLKRIA--PERSYEIETLRTLGDRDQLTALYDFGAKSLW 67 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDL 121 T E+E+KL+SGE+D VH KDMPT L +++A PR+D RD I ++ S+K+L Sbjct: 68 TTELEEKLVSGELDVIVHCLKDMPTTLPDTCELAAIPPRDDPRDALIVKSSLPYTSIKEL 127 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRL 179 +V+GTSS+RR A L R + + RG +ETRL KL+N + ++++ AG++R+ Sbjct: 128 PKGAVVGTSSVRRSAQLRRLYPYLRFANIRGNVETRLAKLDNPASEYTCMVMSAAGLERV 187 Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 ++ I + L +D + GQGA+ +E + K QEL+ + + + ER+ + Sbjct: 188 GRKFRINQYLCSKDGGIFHAVGQGALGLEIRKGDTKTQELLDQLADRKSTLACLAERSLM 247 Query: 238 AELDGSCKSAIA-GFAYCKGSTLYFYGIVLASDG 270 L+G C I + + L +V++ DG Sbjct: 248 RTLEGGCSVPIGVETEWIRSDVLKITALVVSLDG 281 >gi|205374358|ref|ZP_03227156.1| porphobilinogen deaminase [Bacillus coahuilensis m4-4] Length = 252 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 102/250 (40%), Positives = 140/250 (56%), Gaps = 9/250 (3%) Query: 8 IGTRCSPLALAHA---FETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +G+R S LAL E L IV TKGD I + TL+++GGKGLF Sbjct: 6 VGSRRSTLALTQTNWVIEQLKQLGGNFTFEVKEIV-----TKGDVILDVTLSKVGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE+ ++ EID AVHS KDMP++L GL + PRED RD IS LKDL Sbjct: 61 VKEIEQAMMDKEIDMAVHSMKDMPSELPSGLTLGCVPPREDRRDALISKNHVKLKDLPKG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183 +VIGTSSLRR A LL R D+ + RG I+TRL KL+ + AI+LA AG+ R+ K Sbjct: 121 AVIGTSSLRRGAQLLAVRPDLDIKWIRGNIDTRLAKLDGEEYDAIILAAAGLARMGWAKD 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V+ E L+ + P+ GQGA+ IE ++ + +L+ N ++T + ER FL +++G Sbjct: 181 VVTEFLSEDICVPAIGQGALGIECREDDEELLDLLSKFNDKETERTTKAERTFLHKMEGG 240 Query: 244 CKSAIAGFAY 253 S Y Sbjct: 241 VPSPNCRICY 250 >gi|194212756|ref|XP_001501130.2| PREDICTED: similar to hydroxymethylbilane synthase [Equus caballus] Length = 348 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 97/271 (35%), Positives = 137/271 (50%), Gaps = 19/271 (7%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K R+GTR S LA + L ++ P II +ST GD+I + L++IG K L Sbjct: 19 KVIRVGTRKSQLARIQTDSVVAMLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLET 136 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLDISPXRGNLNTRLRKLDELQEFSAIILAAAGLQRM 196 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 197 GWQNRM-------------GQGALGVEVRAKDQDILDLVGVLHDPETLLCCLAERAFLRH 243 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 L+G C +A K LY G V + DG Sbjct: 244 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDG 274 >gi|320168193|gb|EFW45092.1| porphobilinogen deaminase [Capsaspora owczarzaki ATCC 30864] Length = 333 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 100/277 (36%), Positives = 141/277 (50%), Gaps = 10/277 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIG 59 M + R+G+R S LAL +T S + + I + +ST GD + +R L++IG Sbjct: 1 MSGRVVRVGSRKSELAL---IQTNSVIARLKAIYSDCTFELTTMSTTGDNVLDRALSKIG 57 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQ 116 K LFT+E+E L E+D VHS KD+PT L G+ I A R+ D I Sbjct: 58 EKSLFTKELEVALAQNEVDLVVHSLKDLPTTLPPGMTIGAICKRDSPYDAVILRAKFAGL 117 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA-ILLAYAG 175 +L L SVIGTSSLRR A L R + D RG + TRL KL++ + +A ++LA AG Sbjct: 118 TLATLPEGSVIGTSSLRRIAQLRRAFPHLVFRDVRGNLNTRLRKLDDAETYAGLILAEAG 177 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + R+ + + EIL E + GQGA+ IE N+ EL+K + DT ERA Sbjct: 178 LDRMGWQGRVSEILKPEVTLYAVGQGALAIECRENDTATLELLKPLQDNDTTLRCTAERA 237 Query: 236 FLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDG 270 F+ L+G C + S+ L G V + DG Sbjct: 238 FMRSLEGGCSVPLGVHTEFDASSGQLRLRGGVFSLDG 274 >gi|297564830|ref|YP_003683802.1| porphobilinogen deaminase [Meiothermus silvanus DSM 9946] gi|296849279|gb|ADH62294.1| porphobilinogen deaminase [Meiothermus silvanus DSM 9946] Length = 294 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 94/300 (31%), Positives = 152/300 (50%), Gaps = 17/300 (5%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LALA +TR + + + P + TK ITNR+ G Sbjct: 6 IGTRGSLLALA---QTRWVVERLKENWPE----VEFRTK--TITNRSEDPAAG------- 49 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 ++ L EID A+H+ +D+P GL ++A R D R+ F+ +A+ L+DL +V+ Sbjct: 50 LQDALRKREIDIALHALRDLPPAQADGLHLTAVTRRVDPREAFVGRSAKRLEDLPDGAVV 109 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 G SLRRKA LL +R D+ V + +G ++ +L L + AI++ + RL I + Sbjct: 110 GAPSLRRKAQLLAYRPDLVVRETKGDVDDQLEALGTGEYDAIIMPAGSLLRLDLRNRIDQ 169 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 ++ E P+PGQGA+ +E + + A+EL +NH + D V ERAF+A L ++ Sbjct: 170 FVDPEILLPAPGQGALGLEVRLGDDYAEELAYSLNHRPSSDRVCAERAFVAALGVGLEAP 229 Query: 248 IAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 +A A+ + TL G V + DG+ G+ +A+ +G + AQ + K + Sbjct: 230 VAALAFVEDDGTLRLEGGVFSPDGREMIRGEIEGDASEAVELGSELAQDLLAEGGKEILE 289 >gi|283457696|ref|YP_003362282.1| porphobilinogen deaminase [Rothia mucilaginosa DY-18] gi|283133697|dbj|BAI64462.1| porphobilinogen deaminase [Rothia mucilaginosa DY-18] Length = 454 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 100/337 (29%), Positives = 155/337 (45%), Gaps = 70/337 (20%) Query: 1 MEKKPFRIGTRCSPLALAH---AFETRSSLMDVHKIPPH---------NIVIIPLSTKGD 48 M + +GTR S LAL A ET +SL H+ H + + + T+GD Sbjct: 78 MSHHEYILGTRGSALALTQSRIAAETVTSLYTEHQA--HHGAADAEVVDFTLRTVKTEGD 135 Query: 49 RITNRTLTEIGGKGLFTEEIEKKLISGE-------IDCAVHSAKDMPTKLLKGLQISAYL 101 +T L +GG G+F + ++L+ GE +D AVHS KD+P+ GL I+A L Sbjct: 136 VLTG-PLATLGGTGVFAAALRQRLLDGENASEENRVDMAVHSLKDLPSAPCPGLVIAATL 194 Query: 102 PREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 RED RD ++ +L L S +GT S RR A L R D+ ++D RG + TR+ ++ Sbjct: 195 KREDPRDALVARDGLTLDTLPEGSRVGTGSPRRAAQLRALRPDLEIVDIRGNVGTRIGRV 254 Query: 162 NNNKAH------------------------------AILLAYAGIKRLKKEKVIKEILNI 191 + H A++LA +G+KRL KE++I E L+ Sbjct: 255 KGLEEHAGKQVVLRQNTETSERADHGVGTERSGDCDAVVLAVSGLKRLGKEELITEYLDP 314 Query: 192 EDFPPSPGQGAICIETH-----------VNNPKAQELVKVI-------NHEDTWDSVNCE 233 P+PGQGA+ +E + +P+ V+ + NH +T +V+ E Sbjct: 315 TRMLPAPGQGALALEVRESEFENPDPAVLADPEVARPVRALGRALLAANHHETRLAVSAE 374 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 RA L L+ C + I +A+ L +V + DG Sbjct: 375 RALLRRLEAGCAAPIGAYAHVVEGDLVLSVVVASPDG 411 >gi|313905566|ref|ZP_07838929.1| porphobilinogen deaminase [Eubacterium cellulosolvens 6] gi|313469629|gb|EFR64968.1| porphobilinogen deaminase [Eubacterium cellulosolvens 6] Length = 299 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 150/299 (50%), Gaps = 9/299 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 ME IGTR S LAL L + K P ++ ++ ++T GDRI +R L +IGG Sbjct: 1 MENNRIIIGTRESRLALVQTGMVADFLRE--KYPERSVELLKMTTTGDRILDRRLDQIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+++ L +GE D VHS KD+P +L + L + RED RDV + + D Sbjct: 59 KGLFVKELDRALAAGECDLCVHSMKDLPMELPEELPLLGCSRREDPRDVLVLPAGRKEPD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 +L IGTSS RR + + D RG ++TRL KL+ ++LA AG+KR+ Sbjct: 119 PSLP--IGTSSRRRILQVQKLYPDAKFESVRGNLQTRLKKLDEGLYGGLILAAAGLKRMG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I + E+ P+ GQG + I+ + +L I+ T + ERAF+ L Sbjct: 177 LENRISRYFSTEEVIPAAGQGVLAIQGRADTYDF-DLDGFIDP-GTMLATLAERAFVRRL 234 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYI 296 +G C +A + G +L G+ + ++ R+ + +A +GR A+ + Sbjct: 235 NGGCSLPVAAYGEFDGESLALRGLYYDEEKRVSRTEERSAIVRTKEEAEALGRGLAEQL 293 >gi|154150777|ref|YP_001404395.1| porphobilinogen deaminase [Candidatus Methanoregula boonei 6A8] gi|153999329|gb|ABS55752.1| porphobilinogen deaminase [Methanoregula boonei 6A8] Length = 294 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 94/268 (35%), Positives = 146/268 (54%), Gaps = 19/268 (7%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIP--LSTKGDRITNRTLTEIGGKG 62 P RIGTR S LALA + + + KI I + +ST+GD +T L EIG +G Sbjct: 2 PVRIGTRGSRLALAQ------TAIVIKKIEALGIEVEQKIISTQGDEVTGVPLHEIGKQG 55 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F ++ +++ EIDCAVHS KD+P G+ SA L R+ D +++ T ++ Sbjct: 56 VFVRALDDAILNNEIDCAVHSMKDIPAIRPSGVFTSAILKRDSPAD-YLAFTGP----VS 110 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 V+GTSS RR+A LLR + + D RG ++TR+ K++ + +A++LA AG+ RL Sbjct: 111 AVKVVGTSSTRRRAQLLRHDPGLDIRDLRGNVDTRIRKMSEGQYNAVVLAEAGLSRLGI- 169 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ E L E F PSP QG I + + +P E++ ++H T V ERA + ++ Sbjct: 170 RIPGERLPPEKFVPSPNQGTIAVVSRA-DPSIMEVLSSLDHPATRKDVAIERAVMEQVGA 228 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270 C + + YCK +L VL+ DG Sbjct: 229 GCFTPMG--IYCKDGSLIAE--VLSLDG 252 >gi|16081675|ref|NP_394046.1| porphobilinogen deaminase [Thermoplasma acidophilum DSM 1728] gi|13627133|sp|Q9HKM5|HEM3_THEAC RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|10639740|emb|CAC11712.1| porphobilinogen deaminase related protein [Thermoplasma acidophilum] Length = 295 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 91/272 (33%), Positives = 138/272 (50%), Gaps = 22/272 (8%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+ A S++ + + + I+ ++GD L IG G+F Sbjct: 4 IRIGTRPSRLAVRQAEIVASAI----RHAGYEVEIVKYRSEGDSDLKSPLYSIGKTGVFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E + ++SG+ID AVHSAKD+P ++ + L+ISA +PR D +S L L S Sbjct: 60 ERLNSLILSGDIDAAVHSAKDIPYEIDRRLRISAVMPRGRFEDALVSENP--LSKLPPGS 117 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSSLRR+ +L R D+ V + RG ++TR+ K+ + I++A A I RL+ Sbjct: 118 VIGTSSLRRRYQILYQRKDVKVSNIRGNVDTRIEKMRSEGMAGIVMALAAIDRLE----- 172 Query: 186 KEILNI-------EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 LN+ E F P+P QG I + + + KA E++ IN DT+D + ER+ Sbjct: 173 ---LNLRYWPFDPEKFVPAPNQGIIAVVSE-DGSKASEVLSSINDADTYDDMMAERSITQ 228 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 L C + + + G + A DG Sbjct: 229 GLKLGCSTPVGILSRHTGKGMRILAQFFAMDG 260 >gi|315586235|gb|ADU40616.1| hydroxymethylbilane synthase [Helicobacter pylori 35A] Length = 306 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 101/282 (35%), Positives = 151/282 (53%), Gaps = 5/282 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L I I + TKGD+I + L +IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANHIKERLKKECFIESE---IQIVKTKGDKILDTPLNKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + + Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + + Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++E+ PS GQGA+ +E N+ L K +N E++ + ER F+ L+G C+ Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFATLQK-LNDEESAFCCHLEREFIKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 I A G + ++ +GK R G++ A+++ Sbjct: 242 PIGVHASLMGDRVKIQAVLGLPNGKEVIAKERQGDKTKALDL 283 >gi|41410101|ref|NP_962937.1| porphobilinogen deaminase [Mycobacterium avium subsp. paratuberculosis K-10] gi|254777076|ref|ZP_05218592.1| porphobilinogen deaminase [Mycobacterium avium subsp. avium ATCC 25291] gi|55976459|sp|Q73SS0|HEM3_MYCPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|41398934|gb|AAS06553.1| HemC [Mycobacterium avium subsp. paratuberculosis K-10] Length = 315 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 91/275 (33%), Positives = 138/275 (50%), Gaps = 14/275 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L + + P +V I +T GDR + E G G+FT Sbjct: 2 IRIGTRGSLLATTQAGGVRDAL--IARGHPAELVTI--TTAGDRSSGPI--ESLGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + G +D AVHS KD+PT ++A R D RD ++ L +L S Sbjct: 56 TALREAIEEGRVDAAVHSHKDLPTADDPRFAVAAIPARNDPRDAVVARDGLVLAELPPGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + + Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLGDV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ +E + + ++ ++ DT SV ERA LAEL+ C Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAGDSRLAAVLAELDDADTRASVTAERALLAELEAGCS 235 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 + + A S + DG+IF E+S G Sbjct: 236 APVGAIAEVVES--------IDEDGRIFEELSLRG 262 >gi|297379462|gb|ADI34349.1| porphobilinogen deaminase [Helicobacter pylori v225d] Length = 306 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 100/282 (35%), Positives = 151/282 (53%), Gaps = 5/282 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANHIKERLKKECSIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + + Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + + Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++E+ PS GQGA+ +E N+ L K +N E++ + ERAF+ L+G C+ Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFATLQK-LNDEESAFCCHLERAFVKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 I A G + ++ +GK + G++ A ++ Sbjct: 242 PIGVHASLMGDRVKIQAVLGLPNGKEAIAKEKQGDKTKAFDL 283 >gi|269926448|ref|YP_003323071.1| porphobilinogen deaminase [Thermobaculum terrenum ATCC BAA-798] gi|269790108|gb|ACZ42249.1| porphobilinogen deaminase [Thermobaculum terrenum ATCC BAA-798] Length = 300 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 84/267 (31%), Positives = 140/267 (52%), Gaps = 4/267 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LAL + L ++ P + + DR + ++ IG G+ Sbjct: 2 KVIKVGTRGSKLALWQTQWVINRLRSLY--PGFQFEPVVIKVTSDRSPDAPISAIGQVGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT++IE+ L++G+I AVHS KD+PT G I+A+ RED RD + Q + DL Sbjct: 60 FTKDIEQALLAGDIHLAVHSLKDLPTLSTPGTVIAAFTEREDPRDCILWPKGQPMPDLN- 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +S +GTSS+RR AL+ + + +V++ RG ++TR+ K+ +L+AYA +KR+ Sbjct: 119 NSRVGTSSVRRSALVRSYWPNANVVNLRGNVDTRVRKMLEGNYDVVLMAYAAVKRMDLPV 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 K L ++ + PS GQG I ++ ++ + ++ IN + + ER+ + L G Sbjct: 179 EFKP-LPLDSWVPSAGQGIIAVQAREDDQQIIGMLNAINFFPSKVAYLAERSLMRALGGG 237 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDG 270 C + +A L G+V A DG Sbjct: 238 CSMPVGAYAELHDGELSLIGMVAAPDG 264 >gi|118467030|ref|YP_883768.1| porphobilinogen deaminase [Mycobacterium avium 104] gi|158512461|sp|A0QLI0|HEM3_MYCA1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|118168317|gb|ABK69214.1| porphobilinogen deaminase [Mycobacterium avium 104] Length = 315 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 91/275 (33%), Positives = 138/275 (50%), Gaps = 14/275 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L + + P +V I +T GDR + E G G+FT Sbjct: 2 IRIGTRGSLLATTQAGGVRDAL--IARGHPAELVTI--TTAGDRSSGPI--ESLGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + G +D AVHS KD+PT ++A R D RD ++ L +L S Sbjct: 56 TALREAIEEGRVDAAVHSHKDLPTADDPRFAVAAIPARNDPRDAVVARDGLVLGELPPGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + + Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLGDV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ +E + + ++ ++ DT SV ERA LAEL+ C Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAGDSRLAAVLAELDDADTRASVTAERALLAELEAGCS 235 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 + + A S + DG+IF E+S G Sbjct: 236 APVGAIAEVVES--------IDEDGRIFEELSLRG 262 >gi|307195489|gb|EFN77375.1| Porphobilinogen deaminase [Harpegnathos saltator] Length = 313 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 91/234 (38%), Positives = 136/234 (58%), Gaps = 5/234 (2%) Query: 45 TKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPRE 104 TKGD+I +++L +IG K LFTEE+E+ L G +D VHS KD+PT L G+ + A L RE Sbjct: 3 TKGDKILDKSLPKIGEKSLFTEELEQALGEGSLDFVVHSLKDLPTILPAGMALGALLKRE 62 Query: 105 DIRDVFI---SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 D RD + ++L L SVIGTSSLRR A L R + V + RG + TRL KL Sbjct: 63 DPRDAVVMSKKFKEKTLSTLPKGSVIGTSSLRRTAQLARNLPHLKVENIRGNLNTRLKKL 122 Query: 162 NNNKA--HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219 ++ K+ AI+LA AG+KR+ + I +I+ E+ + GQGA+ +E ++ + + L++ Sbjct: 123 DDEKSAYAAIVLAAAGLKRIGWKDRISQIMEPEEALYAVGQGALGVECRESDWETRSLLE 182 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 + +T CER+FL L G C + +A + +G L G V + DG+ Sbjct: 183 PLYDMETTLKCVCERSFLKTLGGGCSAPVAVASSLEGEELKITGAVWSLDGQTL 236 >gi|261837684|gb|ACX97450.1| porphobilinogen deaminase [Helicobacter pylori 51] Length = 306 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 101/282 (35%), Positives = 151/282 (53%), Gaps = 5/282 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L I I + TKGD+I + L +IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANHIKERLKKECLIESE---IQIVKTKGDKILDTPLNKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + + Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + + Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++E+ PS GQGA+ +E N+ L K +N E++ + ERAF+ L+G C+ Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFATLQK-LNDEESAFCCHLERAFIKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 I A G + ++ +GK + G++ A ++ Sbjct: 242 PIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDL 283 >gi|302523839|ref|ZP_07276181.1| porphobilinogen deaminase [Streptomyces sp. AA4] gi|302432734|gb|EFL04550.1| porphobilinogen deaminase [Streptomyces sp. AA4] Length = 315 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 83/248 (33%), Positives = 134/248 (54%), Gaps = 7/248 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LALA + D + + I+ ++T GD +++ +++IG G+FT Sbjct: 5 IRIGTRGSKLALAQT----GIVADTIRATGAEVEIVTVTTPGD-LSSAPISQIG-VGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + L+ EID AVHS KD+PT GL ++A PRED RD I+ +L +L + Sbjct: 59 SALREALLRNEIDVAVHSYKDLPTAPEAGLVLAAVPPREDPRDALIARDGLTLGELPPGA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT + RR A L + ++ RG I+TR+ K+ + + A++LA AG+ R+ + I Sbjct: 119 KVGTGAARRMAQLRALGLGLEIVPIRGNIDTRMRKVTDGELDAVVLARAGLARVGRVDEI 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELV-KVINHEDTWDSVNCERAFLAELDGSC 244 E L+ P+P QGA+ +E + + L+ ++ E T +V ERA LA L+ C Sbjct: 179 TETLDPIQMLPAPAQGALALECRAADVDIEHLLASAVDDETTRVAVTAERALLAALEAGC 238 Query: 245 KSAIAGFA 252 + + A Sbjct: 239 SAPVGALA 246 >gi|305679995|ref|ZP_07402805.1| hydroxymethylbilane synthase [Corynebacterium matruchotii ATCC 14266] gi|305660615|gb|EFM50112.1| hydroxymethylbilane synthase [Corynebacterium matruchotii ATCC 14266] Length = 298 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 90/291 (30%), Positives = 146/291 (50%), Gaps = 10/291 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LA A R +L H P ++ +T GD N E G G+FT+ Sbjct: 4 IGTRGSLLATTQAGHVRDALTS-HGYPSELRIV---TTTGD--VNLAPVERIGVGVFTQA 57 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALHSV 126 + L++GE D AVHS KD+PT + + + +P RE+ RD I+ +L +L +V Sbjct: 58 LRDSLLAGECDIAVHSFKDLPTAVDERFHL--VVPHRENARDCLIARNNLTLAELPTGAV 115 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GT + RR A L R DI + RG I+TR+ K+++ + A++LAYAG+ R+ + Sbjct: 116 VGTGAPRRIAQLKALRPDIHTVPLRGNIDTRMAKVHDGELDAVVLAYAGLSRVHRADEAT 175 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E+ + +F P+P QGA+ +E ++ + I + + ER LA L+ C + Sbjct: 176 EVFDPLEFLPAPAQGALAVECRADDADTIAAITTIADPKAYACAHTERVVLARLEAGCTA 235 Query: 247 AIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +A +A + + + V+A DG + G A N+G A+ + Sbjct: 236 PVAAYATVAADNIMTLHAAVIAVDGSATLRATAAGPIDTAENLGMTVARAL 286 >gi|294630701|ref|ZP_06709261.1| porphobilinogen deaminase [Streptomyces sp. e14] gi|292834034|gb|EFF92383.1| porphobilinogen deaminase [Streptomyces sp. e14] Length = 326 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 92/314 (29%), Positives = 154/314 (49%), Gaps = 31/314 (9%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIGGKGLF 64 R+GTR S LA+A + + ++ V P + ++ ++T GD T+R L +IGG G+F Sbjct: 1 MRLGTRRSKLAMAQSGQVADAVSQVTGRP---VELVEITTYGD--TSREHLAQIGGTGVF 55 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L GE+D AVHS KD+PT L ++A RED RDV ++ A DL Sbjct: 56 VAALREALARGEVDFAVHSLKDLPTAQPAELVLAAIPEREDPRDVLVARDALKFADLPRG 115 Query: 125 SVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +GT S RR A L + DI + RG ++TR+ ++ + A++LA AG+ R+ Sbjct: 116 ARVGTGSPRRMAQLNAYARAHGLDIETVPIRGNVDTRIGFVHGGELDAVVLAAAGLNRIG 175 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + + L+++ P+PGQGA+ IE + + ++ T +V ER+ LA L Sbjct: 176 RGDEVTDFLSVDTVLPAPGQGALAIECAADRADLVAALAELDDPHTRAAVTAERSLLAAL 235 Query: 241 DGSCKSAIAGFAYCKGST-----------------LYFYGIVLASDGKIFHEVSRNG--- 280 + C + + A + + G+V +DG ++S G Sbjct: 236 EAGCSAPVGALADLPPLSAPLERAEPQADRQIVKEMRLRGVVGTTDGSTLVQLSTTGPVP 295 Query: 281 -NRCDAINIGRDAA 293 DA+ +GR+ A Sbjct: 296 RTHDDAMALGRELA 309 >gi|308063099|gb|ADO04986.1| porphobilinogen deaminase [Helicobacter pylori Sat464] Length = 306 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 101/282 (35%), Positives = 152/282 (53%), Gaps = 5/282 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L I I + TKGD+I + L +IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANHIKERLKKECLIESE---IQIVKTKGDKILDTPLNKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + + Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + + Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++E+ PS GQGA+ +E N+ L K +N E++ + ERAF+ L+G C+ Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFATLQK-LNDEESAFCCHLERAFVKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 I A G + ++ +GK + G++ A+++ Sbjct: 242 PIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKNKALDL 283 >gi|302535112|ref|ZP_07287454.1| porphobilinogen deaminase [Streptomyces sp. C] gi|302444007|gb|EFL15823.1| porphobilinogen deaminase [Streptomyces sp. C] Length = 322 Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 88/306 (28%), Positives = 157/306 (51%), Gaps = 17/306 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P R+GTR S LA++ + + V I + ++ ++T GD ++ L +IGG G+ Sbjct: 7 QPLRLGTRRSKLAMSQSGHVAEA---VRAITGRPVELVEITTYGD-VSRENLAQIGGTGV 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F + L+ GE+D AVHS KD+PT L I+A RED RD ++ + + L Sbjct: 63 FVTALRDALVRGEVDFAVHSLKDLPTAQPDELVIAAMPKREDPRDALVARDGLTFEQLPD 122 Query: 124 HSVIGTSSLRRKALLLRW-RS---DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 + +GT S RR A L + RS + + RG ++TR+ + + + A++LA AG+ R+ Sbjct: 123 GARVGTGSPRRMAQLNAYARSLGKSVETVAIRGNVDTRIGFVRSGELDAVVLAAAGLNRI 182 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++L++++ P+PGQGA+ +E ++ + ++ T +V ERA LA Sbjct: 183 GRADEATDLLSVDNVLPAPGQGALAVECLASDADLISALGRLDDPHTRAAVTAERALLAA 242 Query: 240 LDGSCKSAIAGFA--YCKG---STLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGR 290 L+ C + + A G + + G+V DG ++S G + +A+ +GR Sbjct: 243 LEAGCSAPVGALADLLADGQIVNEMRLRGVVGTLDGSTLVQLSTTGPVPQSYDEAMALGR 302 Query: 291 DAAQYI 296 + A + Sbjct: 303 ELADEM 308 >gi|188527044|ref|YP_001909731.1| porphobilinogen deaminase [Helicobacter pylori Shi470] gi|238058919|sp|B2US69|HEM3_HELPS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|188143284|gb|ACD47701.1| porphobilinogen deaminase [Helicobacter pylori Shi470] Length = 306 Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 100/282 (35%), Positives = 151/282 (53%), Gaps = 5/282 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANHIKERLKKECSIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + + Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + + Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++E+ PS GQGA+ +E ++ L K +N E++ + ERAF+ L+G C+ Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKSHKHFATLQK-LNDEESAFCCHLERAFVKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 I A G + ++ +GK R G++ A ++ Sbjct: 242 PIGVHASLMGDRVKIRAVLGLPNGKEVIAKERQGDKTKAFDL 283 >gi|315223357|ref|ZP_07865216.1| hydroxymethylbilane synthase [Capnocytophaga ochracea F0287] gi|314946688|gb|EFS98677.1| hydroxymethylbilane synthase [Capnocytophaga ochracea F0287] Length = 288 Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 92/266 (34%), Positives = 142/266 (53%), Gaps = 7/266 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A ++ L K + I+ + GD ++ L E+G G+FT Sbjct: 4 IRIGTRDSELALWQAKTVQNQL----KTLGYATEIVSTKSHGDIELSKPLYEMGVTGIFT 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + ++ L++ EID AVHS KD+PT L +G+ + A L R + DV + S + + + Sbjct: 60 KALDIALLNSEIDIAVHSMKDVPTALPEGIVVGAVLKRGNPHDVLVYKGDLSFLEAEIVT 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 I TSSLRRKA L ++ RG + TRL KL +N + + A AG++R+ K+ Sbjct: 120 -IATSSLRRKAQWLHRYPHHNIESLRGNVNTRLQKLTDNPWNGAIFAAAGLERIN--KLP 176 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ L ++ P+P QGAI + N Q+ + ++ + T+ + ER FL L+G C Sbjct: 177 EKHLVLDWMLPAPAQGAIVVVVREANVALQKKLLPLHDDYTYIATQLERDFLRALEGGCT 236 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGK 271 + I FA K LYF G + + DGK Sbjct: 237 APIGAFAEFKDDKLYFKGGLWSEDGK 262 >gi|149369456|ref|ZP_01889308.1| porphobilinogen deaminase [unidentified eubacterium SCB49] gi|149356883|gb|EDM45438.1| porphobilinogen deaminase [unidentified eubacterium SCB49] Length = 313 Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 148/300 (49%), Gaps = 20/300 (6%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LAL A + L + + ++P+ + GD + ++ L E+G G+ Sbjct: 3 KVIRIGTRDSELALWQANTVKRQLESLG----YKTELLPVKSTGDLVLDKPLYEMGITGI 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ ++ +++G +D AVHS KD+PT L KG+ +A L R DV ++ S D Sbjct: 59 FTKTLDVAMLNGTVDIAVHSMKDVPTALPKGIIQTAVLERAMTEDVLVT---TSEIDYTK 115 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 I T SLRRKA L +V+D RG ++TRL KL +N + A AG+ RL E Sbjct: 116 PCTIATGSLRRKAQWLNRYPHHTVVDLRGNVQTRLQKLKDNPWDGAIFAKAGLDRL--EY 173 Query: 184 VIKEILNIEDFP----------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 + + DF P+P QGA+ I T N+ + V +N+ E Sbjct: 174 LNNTEITSPDFSGTFENLSWMLPAPAQGAMVIVTLQNDDFTTKAVSKLNNTAADICTQIE 233 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 R FL +L+G C + I A + F G + + DGK EV + ++ + N G DAA Sbjct: 234 RDFLRKLEGGCTAPIGALAQVVEENIQFTGCLFSLDGKTKIEVEKTIDKNNN-NGGVDAA 292 >gi|317177053|dbj|BAJ54842.1| porphobilinogen deaminase [Helicobacter pylori F16] Length = 306 Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 98/282 (34%), Positives = 151/282 (53%), Gaps = 5/282 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L + ++ TKGD+I + L +IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANHIKERLKKECSMESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + + Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + + Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++E+ PS GQGA+ +E N+ L K +N E++ + ER F+ L+G C+ Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFATLQK-LNDEESAFCCHLEREFVKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 I A G + ++ +GK + G++ A+++ Sbjct: 242 PIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKALDL 283 >gi|289705146|ref|ZP_06501550.1| hydroxymethylbilane synthase [Micrococcus luteus SK58] gi|289558174|gb|EFD51461.1| hydroxymethylbilane synthase [Micrococcus luteus SK58] Length = 377 Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 91/285 (31%), Positives = 139/285 (48%), Gaps = 47/285 (16%) Query: 5 PFRIGTRCSPLA------LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 P RIGTR S LA +A A RS L H +V+I T+GD +T +L + Sbjct: 3 PLRIGTRGSALATTQTTHVAEALTERSGLA-------HELVVI--RTEGD-VTTGSLASL 52 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GG G+F + ++ G +D AVHS KD+P + L+I+A R D+RD + +L Sbjct: 53 GGTGVFASALRAAVLDGAVDAAVHSLKDLPAAQPETLEIAAVPARADLRDALCARDGLTL 112 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH----------- 167 L + +GT S RR A L R D+ ++D RG ++TRL ++ + H Sbjct: 113 ATLPEGARVGTGSPRRVAQLKALRPDLELVDIRGNVQTRLARVPGLEQHDDHAPAAAGSP 172 Query: 168 -----AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVN----------NP 212 A++LA AG+ RL + VI E ++ E P+PGQGA+ +E +P Sbjct: 173 RGDLDAVILACAGLDRLGLDHVITERIDPEVMVPAPGQGALAVEIRAEDESFLGRALLDP 232 Query: 213 KA-----QELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252 +A +++++ DT +V ERA L L+ C + I A Sbjct: 233 QAPVGRLHAALELVDDRDTHVAVTAERALLRRLEAGCAAPIGAVA 277 >gi|182437949|ref|YP_001825668.1| porphobilinogen deaminase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326778585|ref|ZP_08237850.1| Porphobilinogen deaminase [Streptomyces cf. griseus XylebKG-1] gi|178466465|dbj|BAG20985.1| putative porphobilinogen deaminase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326658918|gb|EGE43764.1| Porphobilinogen deaminase [Streptomyces cf. griseus XylebKG-1] Length = 328 Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 97/303 (32%), Positives = 154/303 (50%), Gaps = 19/303 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIGGKGL 63 P R+GTR S LA+A + + V ++ + ++ ++T GD T+R L +IGG G+ Sbjct: 14 PLRLGTRRSKLAMAQSGLVAEA---VREVTGRAVELVEITTYGD--TSREHLAQIGGTGV 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F + + L+ GE+D AVHS KD+PT L ++A RED RD I+ + L Sbjct: 69 FVAALREALVRGEVDFAVHSLKDLPTFQPDDLVLAAVPQREDPRDALIARDGLTFGQLPE 128 Query: 124 HSVIGTSSLRRKALLLRW-RSD---ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 + +GT S RR A L + RS I + RG ++TR+ + + + A++LA AG+ RL Sbjct: 129 GARVGTGSPRRMAQLNAYARSHGLRIETVPIRGNVDTRIGFVRDGELDAVVLAAAGLSRL 188 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + E L ++ P+PGQGA+ IE ++ + ++ T +V ERA LA Sbjct: 189 GRSGEVTEFLPVDTVLPAPGQGALAIECAASSADLAAALAELDDPYTRAAVTAERALLAA 248 Query: 240 LDGSCKSAIAGFA--YCKGST---LYFYGIVLASDGKIFHEVSRNG----NRCDAINIGR 290 L+ C + + A G L G+V +DG ++S G + DA IGR Sbjct: 249 LEAGCSAPVGALADLLVDGQVVNELRLRGVVGTTDGSSLVQLSTTGPVPTSHDDAAAIGR 308 Query: 291 DAA 293 + A Sbjct: 309 ELA 311 >gi|312878897|ref|ZP_07738697.1| porphobilinogen deaminase [Aminomonas paucivorans DSM 12260] gi|310782188|gb|EFQ22586.1| porphobilinogen deaminase [Aminomonas paucivorans DSM 12260] Length = 301 Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 92/261 (35%), Positives = 135/261 (51%), Gaps = 8/261 (3%) Query: 10 TRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIE 69 TR SPLA +TR MD + + +ST GDR L GG G F + +E Sbjct: 5 TRGSPLA---RIQTRG-WMDALESLGAETTLQAVSTHGDRDRTTPLPCFGGFGAFVKALE 60 Query: 70 KKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGT 129 +KL++GE D AVHS KD+P +GL ++ LPR + D+ ++ SL+ L + +G+ Sbjct: 61 EKLLAGEGDGAVHSLKDVPVAQPEGLVLAGVLPRGPVGDLLVTREGLSLETLPPGARVGS 120 Query: 130 SSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEIL 189 SSLRR A LR R D+ + RG ++TRL KL + A++LA AG++RL + + + Sbjct: 121 SSLRRTAQGLRVRKDLRFLCCRGNVQTRLRKLEAGELDALILAEAGVRRLGLD--LPGAV 178 Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 + F +PGQGA+ +E + + L + NH TW V ER L C + +A Sbjct: 179 RL-PFLSTPGQGAVALEARAGS-VLESLARQTNHLPTWLEVCGERQVLGAFGKGCSAPVA 236 Query: 250 GFAYCKGSTLYFYGIVLASDG 270 +G L VLA DG Sbjct: 237 VQGRYEGGVLTLEAEVLALDG 257 >gi|88802327|ref|ZP_01117854.1| porphobilinogen deaminase HemC [Polaribacter irgensii 23-P] gi|88781185|gb|EAR12363.1| porphobilinogen deaminase HemC [Polaribacter irgensii 23-P] Length = 531 Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 97/297 (32%), Positives = 149/297 (50%), Gaps = 10/297 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K RIGTR S LAL A + R L + + V++P+ + GD + L E+G G Sbjct: 2 QKIIRIGTRDSQLALWQANKVRKELAGLG----YESVLVPIKSSGDINLDTPLYEMGITG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT+ ++ L+ G+ID AVHS KD+PT L KG+ +A L R + DV + + + Sbjct: 58 IFTKSLDIALLEGKIDIAVHSLKDVPTALPKGIVQAAVLKRGNYNDVLVLNGTEEFFG-E 116 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181 +I T SLRRKA+ L V RG ++TRL KL +K + + A AG++RL Sbjct: 117 EQGLIATGSLRRKAMWLDRYPTHKVAPLRGNVQTRLEKLETSKTWNGAVFAAAGLERLGI 176 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 ++ +++ P+P QGAI I + + + INH +T V ER FL L+ Sbjct: 177 TP--EDTVDLPWMLPAPAQGAIMIAALEKDDFTLDACEQINHHETSVCVGVEREFLRLLE 234 Query: 242 GSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 G C + I AY T + F ++L DG V++ + +D A Y+ Sbjct: 235 GGCTAPIGALAYVDARTDEVNFKAVLLKKDGSKKIRVAKTAKFGSHKFLAKDCADYV 291 >gi|326201521|ref|ZP_08191392.1| porphobilinogen deaminase [Clostridium papyrosolvens DSM 2782] gi|325988121|gb|EGD48946.1| porphobilinogen deaminase [Clostridium papyrosolvens DSM 2782] Length = 297 Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 85/261 (32%), Positives = 143/261 (54%), Gaps = 7/261 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIG+R S LA+ + +++ + P + +I + T GD+I ++TL +IGGKGL Sbjct: 6 KKIRIGSRDSKLAIIQSEMVMAAIREFD--PDIELELITMKTTGDKILDKTLDKIGGKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E++ L + E+D VHS KDMP + L + A RED RD F+ ++ ++ Sbjct: 64 FVKELDYALYNNEVDITVHSYKDMPLEDNPELPVVAVSKREDPRDAFVLPQGENTEN--- 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IG+SS RR+ L + RG ++TRL KL++ + AI+LA AGIKRL E Sbjct: 121 NEPIGSSSQRRQLQLKALFPNHKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLES 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I ++++ P+ QG I ++ + + +K+ + E++ + ER F+ E++G Sbjct: 181 RISRYFSVDEILPAASQGIIAVQGRAG--ENFDFLKLFHSEESLCISHAERTFVREMNGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGI 264 C + IA +A S + G+ Sbjct: 239 CSTPIAAYATIVESEIILKGL 259 >gi|317181546|dbj|BAJ59330.1| porphobilinogen deaminase [Helicobacter pylori F57] Length = 306 Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 100/286 (34%), Positives = 153/286 (53%), Gaps = 5/286 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K IG+R S LAL A + L I ++ TKGD+I + L +IGGKGL Sbjct: 2 KKLVIGSRGSELALWQANHIKERLKKECLIESEIQIV---KTKGDKILDAPLNKIGGKGL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L Sbjct: 59 FTKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 119 GAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQG 178 Query: 184 V-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ ++E+ PS GQGA+ +E ++ L K +N E++ + ERAF+ L+G Sbjct: 179 AKYRKAFSVEEMIPSMGQGALGVEMLKSHKHFATLQK-LNDEESAFCCHLERAFVKGLNG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 C+ I A G + ++ +GK + G++ A+++ Sbjct: 238 GCQIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKALDL 283 >gi|255326986|ref|ZP_05368062.1| hydroxymethylbilane synthase [Rothia mucilaginosa ATCC 25296] gi|255296203|gb|EET75544.1| hydroxymethylbilane synthase [Rothia mucilaginosa ATCC 25296] Length = 377 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 99/337 (29%), Positives = 155/337 (45%), Gaps = 70/337 (20%) Query: 1 MEKKPFRIGTRCSPLALAH---AFETRSSLMDVHKIPPHNIVIIP---------LSTKGD 48 M + +GTR S LAL A ET +SL H+ H+ P + T+GD Sbjct: 1 MSHHEYTLGTRGSALALTQSRIAAETVTSLYTEHQA--HHGAENPEAVSFELRTVKTEGD 58 Query: 49 RITNRTLTEIGGKGLFTEEIEKKLISGE-------IDCAVHSAKDMPTKLLKGLQISAYL 101 +T L +GG G+F + ++L+ GE +D AVHS KD+P+ GL ++A L Sbjct: 59 VLTG-PLATLGGTGVFAAALRQRLLDGENASEENRVDMAVHSLKDLPSAPCPGLVVAATL 117 Query: 102 PREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 RED RD ++ ++ L S +GT S RR A L R D+ ++D RG + TR+ ++ Sbjct: 118 KREDPRDALVARDGLTVDTLPEGSRVGTGSPRRAAQLRALRPDLEIVDVRGNVGTRIGRV 177 Query: 162 NNNKAH------------------------------AILLAYAGIKRLKKEKVIKEILNI 191 + H A++LA +G+KRL KE++I E L+ Sbjct: 178 KGLEEHAGKQVVLRQNAETSERADHGVGTERSGDCDAVVLAVSGLKRLGKEELITEYLDP 237 Query: 192 EDFPPSPGQGAICIETH-----------VNNPKAQELVKVI-------NHEDTWDSVNCE 233 P+PGQGA+ +E + +P+ V+ + NH +T +V+ E Sbjct: 238 TRMLPAPGQGALALEVRESEFENPDSAVLADPEVARPVRALGRALLAANHHETRLAVSAE 297 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 RA L L+ C + I +A+ L +V + DG Sbjct: 298 RALLRRLEAGCAAPIGAYAHVVEGDLVLNVVVASPDG 334 >gi|256787075|ref|ZP_05525506.1| porphobilinogen deaminase [Streptomyces lividans TK24] Length = 303 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 80/261 (30%), Positives = 139/261 (53%), Gaps = 12/261 (4%) Query: 30 VHKIPPHNIVIIPLSTKGDRITNRT-LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMP 88 V ++ + ++ ++T GD T+R L +IGG G+F + L+ GE+D AVHS KD+P Sbjct: 11 VSQVTGRPVELVEITTYGD--TSREHLAQIGGTGVFVAALRDALLRGEVDFAVHSLKDLP 68 Query: 89 TKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS----D 144 T +GL ++A RED RDV ++ A+ L DL + +GT + RR A L + + Sbjct: 69 TAQHEGLVVAAIPEREDPRDVVVARDARKLTDLPRGARVGTGAPRRMAQLNAYARTHGME 128 Query: 145 ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAIC 204 I + RG ++TR+ + + + A++LA AG+ R+ + + + L+++ P+PGQGA+ Sbjct: 129 IETVPIRGNVDTRIGYVRSGELDAVVLAAAGLNRVGRIDEVTDFLSVDTVLPAPGQGALA 188 Query: 205 IETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA--YCKGST---L 259 +E +N + ++ T +V ER+ LA L+ C + + A G T + Sbjct: 189 VECAADNASLIAALAELDDPFTRAAVTAERSLLAALEAGCSAPVGALADLLADGQTVKEM 248 Query: 260 YFYGIVLASDGKIFHEVSRNG 280 G+V +DG ++S G Sbjct: 249 RLRGVVGTTDGSTLVQLSTTG 269 >gi|217033471|ref|ZP_03438901.1| hypothetical protein HP9810_1g85 [Helicobacter pylori 98-10] gi|216944176|gb|EEC23604.1| hypothetical protein HP9810_1g85 [Helicobacter pylori 98-10] Length = 306 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 99/282 (35%), Positives = 151/282 (53%), Gaps = 5/282 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANHIKERLKKECFIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + + Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + + Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++E+ PS GQGA+ +E N+ L K +N E++ + ER F+ L+G C+ Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFTTLQK-LNDEESAFCCHLEREFIKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 I A G + ++ +GK + G++ A+++ Sbjct: 242 PIGVHASLMGDRVKIRAVLGLPNGKEVITKEKQGDKTKALDL 283 >gi|295131995|ref|YP_003582671.1| porphobilinogen deaminase [Zunongwangia profunda SM-A87] gi|294980010|gb|ADF50475.1| porphobilinogen deaminase [Zunongwangia profunda SM-A87] Length = 304 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 88/276 (31%), Positives = 145/276 (52%), Gaps = 10/276 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LAL A +S+L + H ++P+ + GD + L E+G G+ Sbjct: 3 KVIRIGTRDSELALWQAKTVQSALEKL----GHQTELVPVKSTGDLNLDVPLYEMGITGI 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ ++ +++G++D AVHS KD+PT L KG+ +A L R + +D+ I H D Sbjct: 59 FTKTLDIAMLTGKVDIAVHSMKDVPTALPKGIVEAAVLKRANTKDILI-HKGTDFLD--A 115 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 I T SLRRK+ L V+D RG + TR+ KL ++ + + A AG++R++ + Sbjct: 116 QGTIATGSLRRKSQWLHRYPTHEVVDLRGNVNTRMQKLEDSNWNGAIFAAAGLERIEIKP 175 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + ++++ P+P QGA+ + + + + +NH T V+ ER FL L+G Sbjct: 176 --ENFIDLDWMIPAPAQGAMLVVALEKDEFTRTAIGALNHYQTDLEVHVEREFLRTLEGG 233 Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSR 278 C + I A + L+F G + + DG EV + Sbjct: 234 CTAPIGALAKIDNDNILHFKGALFSLDGSQKIEVEK 269 >gi|325102976|ref|YP_004272630.1| porphobilinogen deaminase [Pedobacter saltans DSM 12145] gi|324971824|gb|ADY50808.1| porphobilinogen deaminase [Pedobacter saltans DSM 12145] Length = 532 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 90/258 (34%), Positives = 143/258 (55%), Gaps = 14/258 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F+IGTR S LAL A S L + + I + T+GD I N L ++ GKG FT Sbjct: 5 FKIGTRGSDLALWQANHVASKLNEAG----YQTEIKIIKTQGDNILNLRLDKLEGKGFFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF--ISHTAQSLKDLAL 123 +E+E+ L++G+ID AVHS KD+PT+ GL ISA RED +V + + K L++ Sbjct: 61 KELEEHLLAGDIDLAVHSHKDLPTENPPGLFISAVSEREDPSEVLLILKDCVDTSKKLSV 120 Query: 124 --HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK- 180 + ++GTSS RR++ + R D+ D RG + TR+ KL + AI+LA AG+ RL Sbjct: 121 KHNGLVGTSSNRRQSQISSVRPDLEFEDLRGNVNTRIQKLRDENYDAIVLAKAGVSRLNL 180 Query: 181 --KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFL 237 E I+ I + + P+P QG + ++ + + ++K VI++++ + ++ ER L Sbjct: 181 DLSEFYIETIEPVAEMIPAPAQGVLAVQIREGDSELDAVLKEVIHNQEVANCISVERKVL 240 Query: 238 AELDGSCKSAIAGFAYCK 255 +G C + +YCK Sbjct: 241 NLFNGGCHMPLG--SYCK 256 >gi|160937983|ref|ZP_02085340.1| hypothetical protein CLOBOL_02876 [Clostridium bolteae ATCC BAA-613] gi|158438977|gb|EDP16732.1| hypothetical protein CLOBOL_02876 [Clostridium bolteae ATCC BAA-613] Length = 302 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 95/269 (35%), Positives = 136/269 (50%), Gaps = 14/269 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL L V P + I+ T GDRI ++ L E GGKG+F Sbjct: 5 IRIGTRKSALALIQTQLVADELRQV--CPGIQVEIVTKDTLGDRILDKPLQEFGGKGVFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E E+ + G ID AVHSAKD+P +L +GL I+A RED RDV ++ ++ ++ Sbjct: 63 SEFEQAIQEGVIDLAVHSAKDLPMELAQGLTIAAVSGREDPRDVLVTMRGHRIRPESVVR 122 Query: 126 VIGTSSLRR--KALLL---RW--RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 IGTSS RR +A L+ W + RG + TRL KL I+LA AG+KR Sbjct: 123 -IGTSSPRRQLQARLMCKTLWPEAAGAECSTLRGNVHTRLRKLEEENFDGIILAAAGLKR 181 Query: 179 ---LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 L+++ L E+F P+ GQG + +E A L + ++H ++ ER+ Sbjct: 182 LGLLEQDTYEYTFLAPEEFIPAGGQGLMAVEAKAGT-AAHSLAQAMDHAQGRLCLDLERS 240 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGI 264 L +LD C I ++ + L +GI Sbjct: 241 VLKQLDAGCHEPIGIYSVLQNGQLEVWGI 269 >gi|160879516|ref|YP_001558484.1| porphobilinogen deaminase [Clostridium phytofermentans ISDg] gi|160428182|gb|ABX41745.1| porphobilinogen deaminase [Clostridium phytofermentans ISDg] Length = 295 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 95/292 (32%), Positives = 145/292 (49%), Gaps = 6/292 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LA+ + S+ H +I + T GD I +++L +IGGKGLF Sbjct: 4 IRIGSRESELAVRQSRILIDSIKQYHN--EIETELITMKTTGDIILDKSLDKIGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ LI G D +VHS KDMP + + L I A+ RED RD + + D L Sbjct: 62 KELDLALIEGRSDLSVHSLKDMPMETPEELPILAFSKREDPRDALVLPLGCTEIDPVLP- 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IG SS RR L + + RG + TRL KL+ + A++LA AG+KRL E I Sbjct: 121 -IGCSSQRRMLQLKKIYPGANYKGIRGNVLTRLEKLDRGEYGALVLAAAGLKRLGLESRI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 I E+ P+ GQG + ++ ++ E +K ++E+ CERAF+ L+G C Sbjct: 180 SRIFTTEEIIPAAGQGILAVQGRAG--ESYEFLKQFHNEEATFQAVCERAFVKTLNGGCS 237 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 S +A +A + + G+ + + G + DA +G A +R Sbjct: 238 SPVAAYAKVEDEMITVTGLYFDEITGDYITGNLTGKKEDAEQLGEMLANKLR 289 >gi|28572887|ref|NP_789667.1| porphobilinogen deaminase [Tropheryma whipplei TW08/27] gi|28411020|emb|CAD67405.1| porphobilinogen deaminase [Tropheryma whipplei TW08/27] Length = 321 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 93/280 (33%), Positives = 142/280 (50%), Gaps = 20/280 (7%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA A + + ++ DV + ++I S + G F Sbjct: 3 PLRIGTRSSLLATAQTAQVQKTMRDVFLLDTQQVLIQTGSVRR------------RDGSF 50 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L+ GE D AVHS KD+P +G I+A LPRED DV + +L L Sbjct: 51 VAALRTALLEGECDLAVHSLKDIPIAPHEGTLITAVLPREDPCDVLCARKDLTLTTLPSG 110 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT+S RR+A +L +R D+ V+ RG I+ RL L+ AI+L+ AG+KR+ +E Sbjct: 111 AKVGTASARRRAQILNFRPDLDVVSLRGNIDKRLIHLDT--LDAIVLSAAGLKRIDREDA 168 Query: 185 IKEILNIEDFPPSPGQGAICIET---HVNNPKAQELVKV-INHEDTWDSVNCERAFLAEL 240 I E +I D+P + GQG++ IE +++P+ + V +++ + ER L+ L Sbjct: 169 ITESFDIHDWPTAAGQGSLAIEVCRAQLDDPQNRVAVTYRLDNPMARVTTTAERGVLSLL 228 Query: 241 DGSCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSR 278 C S IA A + +L + V + DGKIF E R Sbjct: 229 QADCFSPIAVHAVYTANDKSLRLHAKVFSRDGKIFCESIR 268 >gi|302387415|ref|YP_003823237.1| porphobilinogen deaminase [Clostridium saccharolyticum WM1] gi|302198043|gb|ADL05614.1| porphobilinogen deaminase [Clostridium saccharolyticum WM1] Length = 300 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 97/273 (35%), Positives = 142/273 (52%), Gaps = 13/273 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ K RIGTR S LA+A A +L +V+ T+GDRI ++ L E GG Sbjct: 1 MKSKTIRIGTRRSALAVAQANIMAEALERTGTGLSAELVLKL--TEGDRILDKPLLEFGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG+F E E+ L+ GEID AVHSAKD+P +L +GL I A L RED RDV ++ + L Sbjct: 59 KGVFVTEFEQALLRGEIDFAVHSAKDLPMELEEGLGIVAVLEREDPRDVLVTPASGILSG 118 Query: 121 LALHSVIGTSSLRRKALL-----LRW-RSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 +IGTSSLRRK + W + + + RG + TRL+KL I+LA A Sbjct: 119 -KREIIIGTSSLRRKIQIEEIGKTMWPEALVRCENLRGNVLTRLSKLMEGSYDGIILAAA 177 Query: 175 GIKRL---KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 G+KRL + + + + F P+ GQG + +E +++ + +VK + E+ + Sbjct: 178 GLKRLGLWEDSRYHYHCFDCDTFIPAGGQGILAVEGRLDSG-LEAVVKSLEDEEARLCLT 236 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFYGI 264 ER L L+ C I ++ K + GI Sbjct: 237 MERKILKLLNAGCHEPIGVYSRLKNGEIEILGI 269 >gi|239918007|ref|YP_002957565.1| hydroxymethylbilane synthase [Micrococcus luteus NCTC 2665] gi|259646260|sp|C5CB88|HEM3_MICLC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|239839214|gb|ACS31011.1| hydroxymethylbilane synthase [Micrococcus luteus NCTC 2665] Length = 377 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 91/286 (31%), Positives = 139/286 (48%), Gaps = 47/286 (16%) Query: 4 KPFRIGTRCSPLA------LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57 P RIGTR S LA +A A RS L H +V+I T+GD +T +L Sbjct: 2 SPLRIGTRGSALATTQTSHVAEALTARSGLA-------HELVVI--RTEGD-VTTGSLAS 51 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 +GG G+F + ++ G +D AVHS KD+P + L+I+A R D+RD + + Sbjct: 52 LGGTGVFASALRAAVLDGVVDAAVHSLKDLPAAQPETLEIAAVPARADLRDALCARDGLT 111 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH---------- 167 L L + +GT S RR A L R D+ ++D RG ++TRL ++ + H Sbjct: 112 LATLPEGARVGTGSPRRVAQLKALRPDLELVDIRGNVQTRLARVPGLEQHDDHAPAAVGS 171 Query: 168 ------AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVN----------N 211 A++LA AG+ RL + VI E ++ E P+PGQGA+ +E + Sbjct: 172 PRGDLDAVILACAGLDRLGLDHVITERIDPEVMVPAPGQGALAMEIRAEDESFLGRALLD 231 Query: 212 PKA-----QELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252 P+A +++++ DT +V ERA L L+ C + I A Sbjct: 232 PEAPVGRLHAALELVDDRDTHVAVTAERALLRRLEAGCAAPIGAVA 277 >gi|154508275|ref|ZP_02043917.1| hypothetical protein ACTODO_00771 [Actinomyces odontolyticus ATCC 17982] gi|153797909|gb|EDN80329.1| hypothetical protein ACTODO_00771 [Actinomyces odontolyticus ATCC 17982] Length = 344 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 95/315 (30%), Positives = 155/315 (49%), Gaps = 33/315 (10%) Query: 1 MEKKPFRIGTRCSPLALAHAF-------ETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR 53 M + F +GTR S LALA + E + L + ++ N+ ++ T GD ++ Sbjct: 1 MTTRTFVLGTRGSRLALAQSTTVARAIEEAGARLGEEVRV---NLEVV--RTHGD-VSAA 54 Query: 54 TLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH 113 L +GG G+F ++ L+ GE D AVHS KD+PT GL+I+A RED RD + Sbjct: 55 PLAALGGVGVFAAQLRLALLGGECDLAVHSFKDLPTAPTPGLRIAAVPQREDPRDALCAA 114 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL------------ 161 +L L +++GT S RR A +L R D+ V D RG + TRL+++ Sbjct: 115 DGATLASLPEGALVGTGSPRRAAQVLAARPDLFVCDLRGNVPTRLSRVRGLDLGADAGTA 174 Query: 162 -----NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH-VNNPKAQ 215 + A++LA AG++R+ + ++L+ P+ QGA+ IET ++P + Sbjct: 175 PSALGTGERLDAVVLALAGLRRIGLDAHATDVLDPAIMMPAASQGALAIETRDEDDPLLR 234 Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIF 273 L+ +NH T + + ERA L+ L C + + FA S L V++ DG+ Sbjct: 235 ALLGTLNHRPTALAASAERAVLSALGAGCAAPVGAFARVDEASSVLLLDARVMSVDGRER 294 Query: 274 HEVSRNGNRCDAINI 288 E S + D++ + Sbjct: 295 VEASGSLALTDSVGL 309 >gi|262201010|ref|YP_003272218.1| porphobilinogen deaminase [Gordonia bronchialis DSM 43247] gi|262084357|gb|ACY20325.1| porphobilinogen deaminase [Gordonia bronchialis DSM 43247] Length = 313 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 93/273 (34%), Positives = 140/273 (51%), Gaps = 14/273 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA A +L + P +VII T GD + + EIG G+F Sbjct: 8 PIRIGTRGSLLATTQAQTIADALTEAGH--PAELVII--RTAGDD-SAAPVAEIG-VGVF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T I L + E+D AVHS KD+PT GL I+A PRED RD +S L +L Sbjct: 62 TTAIRIALHNREVDVAVHSYKDLPTADEPGLYIAAVPPREDPRDALVSRDNMVLGELPPG 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S IGTS+ RR A L + + RG +++RL K+ + + A+++A AG+ R+ + Sbjct: 122 STIGTSAPRRVAQLRALGLGLEIRPLRGNLDSRLGKVASGELDAVVVARAGLVRIGRADE 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E + P+P QGA+ +E ++ + ++ ++ E T +++ ERA LA L+ C Sbjct: 182 VTESFDPVVLLPAPAQGALAVECRSDDAQLVRILAELDDESTRAAIDAERAVLAALEAGC 241 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277 + I A S + DG+IF E+S Sbjct: 242 TAPIGAIAEVVES--------IDDDGRIFAELS 266 >gi|169779115|ref|XP_001824022.1| porphobilinogen deaminase [Aspergillus oryzae RIB40] gi|83772761|dbj|BAE62889.1| unnamed protein product [Aspergillus oryzae] Length = 342 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 104/301 (34%), Positives = 154/301 (51%), Gaps = 15/301 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K F +GTR S LAL+ S+L V+ P + I T GD T E K Sbjct: 17 RKTFTVGTRKSKLALSQTDLVVSALKKVY--PNYEFKIHSQETAGDLNTTIAFREFTTKN 74 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 L+TEE+E+ L++G +D VHS KD+PT L + + RED RDV + SL Sbjct: 75 LWTEELEEHLMAGNVDFIVHSLKDVPTTLPPACTLGPMMEREDSRDVLVIKQGLPNMSLS 134 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177 DL SV+GTSS+RR A L + VID RG I TRL KL+ ++ I+LA AG+ Sbjct: 135 DLPAGSVVGTSSIRRTAQLALKYPHLKVIDVRGNIGTRLAKLDAEDSPYTCIILAAAGLL 194 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 RL + I + L+ ++ + GQGA+ IE ++ ++++ I H +T + ER+ Sbjct: 195 RLGLDDRISQYLDSKNGGMLYAVGQGALGIEIRKDDQVMRDMLNNIGHNETTFASTAERS 254 Query: 236 FLAELDGSCKSAIA-GFAYCKGS----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 L L+G C + + + K S L IV++ DGK EV +G+ D++ Sbjct: 255 LLRTLEGGCSAPLGVETEWIKSSDGSKKLRMRSIVVSVDGKESAEVEIDGS-VDSVQAAE 313 Query: 291 D 291 D Sbjct: 314 D 314 >gi|220928704|ref|YP_002505613.1| porphobilinogen deaminase [Clostridium cellulolyticum H10] gi|254800245|sp|B8I0Q8|HEM3_CLOCE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|219999032|gb|ACL75633.1| porphobilinogen deaminase [Clostridium cellulolyticum H10] Length = 293 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 85/261 (32%), Positives = 141/261 (54%), Gaps = 7/261 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIG+R S LA+ + +++ + P + +I + T GD+I ++TL +IGGKGL Sbjct: 2 KKIRIGSRDSKLAIIQSEMVMAAIREFD--PDIELELITMKTTGDKILDKTLDKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E++ L + E+D VHS KDMP + L + A RED RD F+ + ++ Sbjct: 60 FVKELDYALYNNEVDITVHSYKDMPLEDNPKLPVVALSKREDPRDAFVLPQGEIAEN--- 116 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IG+SS RR+ L + RG ++TRL KL++ + AI+LA AGIKRL E Sbjct: 117 NEPIGSSSQRRQLQLKALFPNRKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLES 176 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I ++++ P+ QG I ++ + + +K+ + E++ ER F+ E++G Sbjct: 177 RISRYFSVDEILPAASQGIIAVQGRAG--ENFDFLKLFHSEESLCISQAERTFVREMNGG 234 Query: 244 CKSAIAGFAYCKGSTLYFYGI 264 C + IA +A S + G+ Sbjct: 235 CSTPIAAYATIVESEIILKGL 255 >gi|118376440|ref|XP_001021402.1| porphobilinogen deaminase family protein [Tetrahymena thermophila] gi|89303169|gb|EAS01157.1| porphobilinogen deaminase family protein [Tetrahymena thermophila SB210] Length = 362 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 100/294 (34%), Positives = 149/294 (50%), Gaps = 29/294 (9%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKI--PPHNIVIIPLST------------- 45 ++ + F+I +R S LAL+ +E L+ V ++ N ++P+S Sbjct: 16 LKNRKFKIASRSSQLALSQTYEVIDLLVGVKELGLTKENFEVVPISNAPGKNCTLKFKIN 75 Query: 46 --------KGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQI 97 KGD+ L +GG G+FT+ +E +L++ D AVHS KD+PT + + L I Sbjct: 76 ITNKQFTNKGDQNLKDPLYVMGGVGVFTKIVEVELLNKNGDIAVHSLKDLPTIIDERLFI 135 Query: 98 SAYLPREDIRDVFI---SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKI 154 A P + DV I H + LKDL SVIGTSSLRR L + + RG + Sbjct: 136 GAVPPLKPRGDVVIFNEKHKGKELKDLPEGSVIGTSSLRRITNLKNRYPHLKYENIRGNL 195 Query: 155 ETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKA 214 TRL KL N + AI+LA AG+ RL + + + L EDF +PGQGA+ ++ ++ +A Sbjct: 196 NTRLTKLENGQYDAIILAEAGVFRLGWIEKVGQFLKQEDFLYAPGQGALGVQCRADDKEA 255 Query: 215 QELVKVINHEDTWDSVNCERAFLAELDG---SCKSAIAGFAYCKGSTLYFYGIV 265 L+ IN ++ V+ ER FL +L+G CK IA + TL G V Sbjct: 256 IALLSYINQKEPRIRVDAERQFLNKLEGVILGCKLPIAVHSEIIDQTLRLTGQV 309 >gi|28493699|ref|NP_787860.1| porphobilinogen deaminase [Tropheryma whipplei str. Twist] gi|28476741|gb|AAO44829.1| porphobilinogen deaminase [Tropheryma whipplei str. Twist] Length = 321 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 93/280 (33%), Positives = 142/280 (50%), Gaps = 20/280 (7%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA A + + ++ DV + ++I S + G F Sbjct: 3 PLRIGTRSSLLATAQTAQVQKTMRDVFLLDTQQVLIQTGSVRR------------RDGSF 50 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L+ GE D AVHS KD+P +G I+A LPRED DV + +L L Sbjct: 51 VAALRTALLEGECDLAVHSLKDIPIAPHEGTLITAVLPREDPCDVLCARKDLTLTTLPSG 110 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT+S RR+A +L +R D+ V+ RG I+ RL L+ AI+L+ AG+KR+ +E Sbjct: 111 AKVGTASARRRAQILNFRPDLDVVSLRGNIDKRLIHLDT--LDAIVLSAAGLKRIDREDA 168 Query: 185 IKEILNIEDFPPSPGQGAICIET---HVNNPKAQELVKV-INHEDTWDSVNCERAFLAEL 240 I E +I D+P + GQG++ IE +++P+ + V +++ + ER L+ L Sbjct: 169 ITESFDIHDWPTAAGQGSLAIEVCRAQLDDPQNRVAVTYRLDNPMARVTTTAERGVLSLL 228 Query: 241 DGSCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSR 278 C S IA A + +L + V + DGKIF E R Sbjct: 229 QADCFSPIAVHAVYTANDKSLGLHAKVFSRDGKIFCESIR 268 >gi|320582367|gb|EFW96584.1| Phorphobilinogen deaminase [Pichia angusta DL-1] Length = 413 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 93/276 (33%), Positives = 147/276 (53%), Gaps = 14/276 (5%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 RIG+R S LA+ + + ++ P I+ LST GD++ N+ L GGK L+T+ Sbjct: 83 RIGSRKSQLAVVQSEIVGIGIQKLY--PKLQTPIVKLSTLGDQVQNKPLYSFGGKSLWTK 140 Query: 67 EIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118 E+E L+ +ID VHS KDMPT L ++ L RED RD + +SL Sbjct: 141 ELEVLLLQSFGEFEQIDMIVHSLKDMPTSLPDEFELGCILQREDPRDALVMRKDSPYKSL 200 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 DL SV+GTSS+RR A LL+ ++ RG + TR+NKL+ ++ ++LA AG+ Sbjct: 201 SDLPDGSVVGTSSVRRSAQLLKNHPNLRFKSIRGNLNTRINKLDAPDSDYACVILAAAGL 260 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ I + L E+ + GQGA+ +E N+PK +++ + ++ + T ER Sbjct: 261 IRINMGHRITQFLGPEEMLYAVGQGALGVEIRKNDPKMKKICQRLDCKSTSIRCRAEREL 320 Query: 237 LAELDGSCKSAIAGFA-YCKGS-TLYFYGIVLASDG 270 L L+G C + ++ Y K + LY +VL+ +G Sbjct: 321 LRTLEGGCSVPVGVWSDYNKDTHELYMKSVVLSVEG 356 >gi|168334266|ref|ZP_02692463.1| uroporphyrinogen III synthase/methyltransferase [Epulopiscium sp. 'N.t. morphotype B'] Length = 785 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 101/265 (38%), Positives = 143/265 (53%), Gaps = 14/265 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F +GTR S LA+A + + + + +I II TKGD IT L +IG KGLF Sbjct: 5 FTVGTRGSALAIAQTKQIIALMQQQNPDATFSIKII--QTKGDAITEIPLDKIGDKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQIS---AYLPRED---IRDVFISHTAQSLK 119 EIE +L+SG+ID A+HS KD+P+ + GL I+ A PR+D +RD IS SL Sbjct: 63 SEIEHQLLSGQIDIAIHSYKDLPSNITPGLIIAHPPARAPRQDALVLRDGTIS----SLD 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 + ++ I T SLRRK LL R D++V+ RG I+TRL KL++ I++A AG+ RL Sbjct: 119 AIPRNATIATGSLRRKLQLLHHRPDLNVVPIRGNIDTRLKKLSD--VDGIVIAAAGLARL 176 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I + + P+ QGAI I+ + A I+ T V+ ERAFL+ Sbjct: 177 DLAHKISYLFPEDILVPAAAQGAIAIQCRATDTTAIACANSISDSTTALEVSAERAFLSA 236 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGI 264 +DGSC + A+ T+Y I Sbjct: 237 IDGSCHIPVGATAHLIDDTMYLKAI 261 >gi|55976374|sp|Q6AB05|HEM3_PROAC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|313772844|gb|EFS38810.1| porphobilinogen deaminase [Propionibacterium acnes HL074PA1] gi|313802779|gb|EFS43997.1| porphobilinogen deaminase [Propionibacterium acnes HL110PA2] gi|313806434|gb|EFS44941.1| porphobilinogen deaminase [Propionibacterium acnes HL087PA2] gi|313810983|gb|EFS48697.1| porphobilinogen deaminase [Propionibacterium acnes HL083PA1] gi|313815286|gb|EFS53000.1| porphobilinogen deaminase [Propionibacterium acnes HL059PA1] gi|313817301|gb|EFS55015.1| porphobilinogen deaminase [Propionibacterium acnes HL046PA2] gi|313824153|gb|EFS61867.1| porphobilinogen deaminase [Propionibacterium acnes HL036PA2] gi|313826520|gb|EFS64234.1| porphobilinogen deaminase [Propionibacterium acnes HL063PA1] gi|313828701|gb|EFS66415.1| porphobilinogen deaminase [Propionibacterium acnes HL063PA2] gi|313831749|gb|EFS69463.1| porphobilinogen deaminase [Propionibacterium acnes HL007PA1] gi|313840063|gb|EFS77777.1| porphobilinogen deaminase [Propionibacterium acnes HL086PA1] gi|314916105|gb|EFS79936.1| porphobilinogen deaminase [Propionibacterium acnes HL005PA4] gi|314917026|gb|EFS80857.1| porphobilinogen deaminase [Propionibacterium acnes HL050PA1] gi|314921302|gb|EFS85133.1| porphobilinogen deaminase [Propionibacterium acnes HL050PA3] gi|314955012|gb|EFS99418.1| porphobilinogen deaminase [Propionibacterium acnes HL027PA1] gi|314959051|gb|EFT03153.1| porphobilinogen deaminase [Propionibacterium acnes HL002PA1] gi|314961324|gb|EFT05425.1| porphobilinogen deaminase [Propionibacterium acnes HL002PA2] gi|314977093|gb|EFT21188.1| porphobilinogen deaminase [Propionibacterium acnes HL045PA1] gi|314989126|gb|EFT33217.1| porphobilinogen deaminase [Propionibacterium acnes HL005PA3] gi|315078439|gb|EFT50470.1| porphobilinogen deaminase [Propionibacterium acnes HL053PA2] gi|315082761|gb|EFT54737.1| porphobilinogen deaminase [Propionibacterium acnes HL027PA2] gi|315086120|gb|EFT58096.1| porphobilinogen deaminase [Propionibacterium acnes HL002PA3] gi|315087704|gb|EFT59680.1| porphobilinogen deaminase [Propionibacterium acnes HL072PA1] gi|315102048|gb|EFT74024.1| porphobilinogen deaminase [Propionibacterium acnes HL046PA1] gi|327331372|gb|EGE73111.1| hydroxymethylbilane synthase [Propionibacterium acnes HL096PA2] gi|327333359|gb|EGE75079.1| hydroxymethylbilane synthase [Propionibacterium acnes HL096PA3] gi|327334882|gb|EGE76593.1| hydroxymethylbilane synthase [Propionibacterium acnes HL097PA1] gi|327449721|gb|EGE96375.1| porphobilinogen deaminase [Propionibacterium acnes HL043PA2] gi|327454571|gb|EGF01226.1| porphobilinogen deaminase [Propionibacterium acnes HL087PA3] gi|327456643|gb|EGF03298.1| porphobilinogen deaminase [Propionibacterium acnes HL083PA2] gi|328755626|gb|EGF69242.1| porphobilinogen deaminase [Propionibacterium acnes HL087PA1] gi|328756706|gb|EGF70322.1| porphobilinogen deaminase [Propionibacterium acnes HL025PA2] gi|328761895|gb|EGF75405.1| hydroxymethylbilane synthase [Propionibacterium acnes HL099PA1] gi|332674709|gb|AEE71525.1| porphobilinogen deaminase [Propionibacterium acnes 266] Length = 334 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 90/267 (33%), Positives = 131/267 (49%), Gaps = 26/267 (9%) Query: 6 FRIGTRCSPLALAH----AFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 R+GTR S LA A RS +DV+ + ++T GD T +L +GG Sbjct: 4 IRLGTRASTLATTQSEMVAGLLRSEGLDVN--------LTTITTHGDTSTA-SLAAMGGI 54 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F I L+ GE D AVHS KD+PT GL I A R D RD ++ +L DL Sbjct: 55 GVFASAIRAALLEGEADIAVHSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDL 114 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--------NNNKA--HAILL 171 + +GT S RR A LL R D++++D RG ++TRL ++ N K A++L Sbjct: 115 PQEASVGTGSPRRAAQLLAVRPDLTIVDIRGNVDTRLGRVKGLGRYAKNGGKEDLDAVVL 174 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED---TWD 228 A +G+ RL + E L+ P+P QGA+ +E + + +L K + D T Sbjct: 175 AASGLARLGHSGAVTEFLDPSVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTRL 234 Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCK 255 + ERA L+ L+ C + I A K Sbjct: 235 AATAERAVLSHLEAGCAAPIGALAQLK 261 >gi|121713720|ref|XP_001274471.1| hydroxymethylbilane synthase, putative [Aspergillus clavatus NRRL 1] gi|119402624|gb|EAW13045.1| hydroxymethylbilane synthase, putative [Aspergillus clavatus NRRL 1] Length = 339 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 98/291 (33%), Positives = 152/291 (52%), Gaps = 14/291 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K F IGTR S LAL+ S+L + P + I T GDR T L E K Sbjct: 14 RKTFTIGTRSSKLALSQTDLIASALK--KRWPDYTFEIHSRETAGDRNTTIALREFTTKN 71 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 L+T+E+E+ L++G++D VHS KD+PT L + RED RDV + SL Sbjct: 72 LWTQELEELLMAGDVDLIVHSLKDVPTLLPSSCTLGPMTEREDSRDVLVMKKGLPRMSLS 131 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177 ++ SV+GTSS+RR A L R + + D RG I TRL KL+ + I+LA AG+ Sbjct: 132 EMPEGSVVGTSSIRRTAQLARRYPHLKIQDVRGNIGTRLAKLDAEDSPFTCIILAAAGLL 191 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 RL + I + L+ ++ + GQGA+ +E ++ E+++ I H++T + ER+ Sbjct: 192 RLGLDDRITQYLDSKNGGMLYAVGQGALGVEIRKDDQLLHEMLQTIGHKETTLACLAERS 251 Query: 236 FLAELDGSCKSAIA-GFAYCKGST----LYFYGIVLASDGKIFHEVSRNGN 281 L L+G C + + + K ST L +V++ DG+ E+ +G+ Sbjct: 252 LLRTLEGGCSAPLGVETEWVKDSTGASKLRMRAVVVSVDGRESAEIEVDGS 302 >gi|308061591|gb|ADO03479.1| porphobilinogen deaminase [Helicobacter pylori Cuz20] Length = 306 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 98/282 (34%), Positives = 151/282 (53%), Gaps = 5/282 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANHIKERLKKECSIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + + Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + + Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++E+ PS GQGA+ +E ++ L K +N E++ + ER F+ L+G C+ Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKSHKHFATLQK-LNDEESAFCCHLEREFIKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 I A G + ++ +GK + G++ A+++ Sbjct: 242 PIGVHASLMGDRVKIRAVLGLPNGKEVIAKEKQGDKTKALDL 283 >gi|238499723|ref|XP_002381096.1| hydroxymethylbilane synthase, putative [Aspergillus flavus NRRL3357] gi|220692849|gb|EED49195.1| hydroxymethylbilane synthase, putative [Aspergillus flavus NRRL3357] Length = 337 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 104/301 (34%), Positives = 154/301 (51%), Gaps = 15/301 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K F +GTR S LAL+ S+L V+ P + I T GD T E K Sbjct: 17 RKTFTVGTRKSKLALSQTDLVVSALKKVY--PNYEFKIHSQETAGDLNTTIAFREFTTKN 74 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 L+TEE+E+ L++G +D VHS KD+PT L + + RED RDV + SL Sbjct: 75 LWTEELEEHLMAGNVDFIVHSLKDVPTTLPPACTLGPMMEREDSRDVLVIKQGLPNMSLS 134 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177 DL SV+GTSS+RR A L + VID RG I TRL KL+ ++ I+LA AG+ Sbjct: 135 DLPAGSVVGTSSIRRTAQLALKYPHLKVIDVRGNIGTRLAKLDAEDSPYTCIILAAAGLL 194 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 RL + I + L+ ++ + GQGA+ IE ++ ++++ I H +T + ER+ Sbjct: 195 RLGLDDRISQYLDSKNGGMLYAVGQGALGIEIRKDDQVMRDMLNNIGHNETTFASTAERS 254 Query: 236 FLAELDGSCKSAIA-GFAYCKGS----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 L L+G C + + + K S L IV++ DGK EV +G+ D++ Sbjct: 255 LLRTLEGGCSAPLGVETEWIKSSDGSKKLRMRSIVVSVDGKESAEVEIDGS-VDSVEAAE 313 Query: 291 D 291 D Sbjct: 314 D 314 >gi|145592441|ref|YP_001154443.1| porphobilinogen deaminase [Pyrobaculum arsenaticum DSM 13514] gi|158514284|sp|A4WN24|HEM3_PYRAR RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|145284209|gb|ABP51791.1| hydroxymethylbilane synthase [Pyrobaculum arsenaticum DSM 13514] Length = 297 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 93/299 (31%), Positives = 147/299 (49%), Gaps = 8/299 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 + TR S L++ E + + V I I+ T GD + ++ L +IG KG+F +E Sbjct: 5 VATRGSKLSMLQTEELLAQIKAVEPSIEFEIKIV--KTTGDEVQDKPLYQIGVKGIFEKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 + ++ GE D AVHS KD+P++L GL ++ + R D +S L+ L +++ Sbjct: 63 VNLAVLRGEADVAVHSLKDLPSELSPGLVLAGFSKRAPPFDAVVSTAGYVLETLPRGALV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--KKEKVI 185 GTSS+RR + R D+ V RG ++TR+NK+ K A ++A AGI RL + Sbjct: 123 GTSSVRRAEFVKAIRPDVRVEPLRGNVDTRINKILQGKYDAAIMAVAGIYRLYGASPPIK 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +L E PP PGQG + + +L+K + ER FL + C Sbjct: 183 LAVLRPEVLPPPPGQGIVAAVVREADSWLIDLLKKASDPKASLEAIAEREFLKAVGAGCH 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 AI G A+ + T+ F AS G+ + V G+ D + +GR AA+ IR + +V Sbjct: 243 VAIGGVAFARNDTVEFIA-GYASGGRKYI-VRVVGD--DPVEVGRRAAEEIRKFKDGDV 297 >gi|238508247|ref|XP_002385322.1| porphobilinogen deaminase Hem3, putative [Aspergillus flavus NRRL3357] gi|220688841|gb|EED45193.1| porphobilinogen deaminase Hem3, putative [Aspergillus flavus NRRL3357] Length = 333 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 95/278 (34%), Positives = 144/278 (51%), Gaps = 12/278 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + P RIGTR S LA+ A R SL P + I L T GD+ + L G K Sbjct: 9 QPPLRIGTRRSKLAIVQAEGIRDSLQKTA--PNRSYEIETLHTLGDKDKSTALYNFGAKS 66 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 L+T E+E+KL SG++D VH KDMPT L + ++A R+D RD + SL+ Sbjct: 67 LWTSELEEKLTSGQLDVIVHCLKDMPTTLPESCDLAAITLRDDPRDALVIKAGLPYTSLQ 126 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIK 177 L +V+GTSS+RR A LLR + + RG +ETRL K++N ++ ++++ AG++ Sbjct: 127 TLPEGAVVGTSSVRRSAQLLRLYPHLRFANLRGNVETRLAKVDNPESEYTCMIMSAAGLE 186 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R+ + I + + +D + GQGA+ +ET + QEL+ + E + + ERA Sbjct: 187 RIGLKHRINQYIGSKDGGILHAVGQGALGLETRKGDSSTQELLNKLVDEKSTLACLAERA 246 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFY---GIVLASDG 270 L L+G C I + YF IV++ DG Sbjct: 247 LLRTLEGGCSVPIGVETEWVDQSEYFLRMRAIVVSLDG 284 >gi|169784578|ref|XP_001826750.1| porphobilinogen deaminase [Aspergillus oryzae RIB40] gi|83775497|dbj|BAE65617.1| unnamed protein product [Aspergillus oryzae] Length = 333 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 95/278 (34%), Positives = 144/278 (51%), Gaps = 12/278 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + P RIGTR S LA+ A R SL P + I L T GD+ + L G K Sbjct: 9 QPPLRIGTRRSKLAIVQAEGIRDSLQKTA--PNRSYEIETLHTLGDKDKSTALYNFGAKS 66 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 L+T E+E+KL SG++D VH KDMPT L + ++A R+D RD + SL+ Sbjct: 67 LWTSELEEKLTSGQLDVIVHCLKDMPTTLPESCDLAAITLRDDPRDALVIKAGLPYTSLQ 126 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIK 177 L +V+GTSS+RR A LLR + + RG +ETRL K++N ++ ++++ AG++ Sbjct: 127 TLPEGAVVGTSSVRRSAQLLRLYPHLRFANLRGNVETRLAKVDNPESEYTCMIMSAAGLE 186 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R+ + I + + +D + GQGA+ +ET + QEL+ + E + + ERA Sbjct: 187 RIGLKHRINQYIGSKDGGILHAVGQGALGLETRKGDSSTQELLNKLVDEKSTLACLAERA 246 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFY---GIVLASDG 270 L L+G C I + YF IV++ DG Sbjct: 247 LLRTLEGGCSVPIGVETEWVDQSEYFLRMRAIVVSLDG 284 >gi|323691803|ref|ZP_08106060.1| hypothetical protein HMPREF9475_00922 [Clostridium symbiosum WAL-14673] gi|323504169|gb|EGB19974.1| hypothetical protein HMPREF9475_00922 [Clostridium symbiosum WAL-14673] Length = 297 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 88/259 (33%), Positives = 139/259 (53%), Gaps = 8/259 (3%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LA+ ++ + ++ ++ P + ++ + T GD I +++L +IGGKGLF Sbjct: 7 RIGSRESVLAV---IQSELIIEEIKRVCPGVSAQLVTMKTTGDMILDKSLEQIGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+++ L+ G D VHS KDMP ++ + L I AY RED RDV + + L+ L Sbjct: 64 KELDRALLDGRCDLTVHSLKDMPMEVPERLPILAYSKREDKRDVLVLR--KGLESLPAGP 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGT S RR+ R D RG + TRL KL++ + A++LA AG+ R+ E I Sbjct: 122 VIGTFSRRRRMQAARLYPDAVFKGIRGNLVTRLRKLDDGEYDALILAAAGLIRMGFEGRI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++++ PS GQG + ++ + +K ++ D+ ERAF+ LDG C Sbjct: 182 SRYFSVDEIIPSAGQGIMAVQGRKED--YFPFIKEVDAPDSRAMALAERAFVRILDGGCS 239 Query: 246 SAIAGFAYCKGSTLYFYGI 264 S A A LY G+ Sbjct: 240 SPCAACAEAAAGRLYLRGL 258 >gi|145254797|ref|XP_001398757.1| porphobilinogen deaminase [Aspergillus niger CBS 513.88] gi|134084341|emb|CAK48681.1| unnamed protein product [Aspergillus niger] Length = 334 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 99/287 (34%), Positives = 150/287 (52%), Gaps = 13/287 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K F IGTR S LAL +++L P + I T GD+ T L + K Sbjct: 14 RKTFTIGTRKSKLALLQTDLVQAALK--QTWPDYEFKIHSRETAGDQNTTIALRDFTTKN 71 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-----SHTAQS 117 L+T+E+E LI+G++D VHS KD+PT L + + RED RDV + S+T S Sbjct: 72 LWTQELEDLLIAGQVDFIVHSLKDVPTLLPSSCTLGPMMKREDTRDVLVMKKGLSYT--S 129 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAG 175 L +L SV+GTSS+RR A L R + V+D RG I TRL+KL+ ++LA AG Sbjct: 130 LAELPEGSVVGTSSIRRTAQLARRYPHLKVMDVRGNIGTRLSKLDAEDGPFTCLILAAAG 189 Query: 176 IKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 + RL I L+ ++ + GQGA+ IE ++ + ++++ I H++T + E Sbjct: 190 LLRLDLGDRITSYLDSKNGGMLYAVGQGALGIEIRKDDQQVLDMLQNIGHKETTFACLAE 249 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 R+ L L+G C + + + L IV++ DGK EV +G Sbjct: 250 RSLLRTLEGGCSAPLGVESEWVNGALTMRSIVVSVDGKESAEVEVDG 296 >gi|295837224|ref|ZP_06824157.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74] gi|197699853|gb|EDY46786.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74] Length = 328 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 91/301 (30%), Positives = 150/301 (49%), Gaps = 26/301 (8%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M KP R+GTR S LA+A + ++ + P + ++ ++T GD + L IGG Sbjct: 1 MTDKPLRLGTRRSKLAMAQSGLVADAVREATGRP---VALVEITTYGD-TSREHLARIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + L+ G++D AVHS KD+PT + L ++A RED RD I+ +L+ Sbjct: 57 TGVFVTALRDALLRGDVDFAVHSLKDLPTAQPEELVLAAIPRREDPRDALIARDGLALEQ 116 Query: 121 LALHSVIGTSSLRRKALL-LRWRS---DISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + IGT S RR A L R+ I + RG ++TR+N + + + A++LA AG+ Sbjct: 117 LPRGARIGTGSPRRTAQLNAHARAHGLGIETVPIRGNVDTRINFVRDGELDAVVLAAAGL 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 RL + + + L + P+PGQGA+ +E P A+ L + ++ T +V ERA Sbjct: 177 HRLGRGAEVTQYLAPDTVLPAPGQGALAVECP-PGPLAEALAR-LDDPYTRAAVAAERAL 234 Query: 237 LAELDGSCKSAIAGFAYCKGST----------------LYFYGIVLASDGKIFHEVSRNG 280 LA L+ C + + A T + G+V ++DG +++ G Sbjct: 235 LATLEAGCSAPVGALADFPDGTQDQAARPNEPARQTTEMRLRGVVGSTDGSALVQLTTTG 294 Query: 281 N 281 + Sbjct: 295 H 295 >gi|325967722|ref|YP_004243914.1| porphobilinogen deaminase [Vulcanisaeta moutnovskia 768-28] gi|323706925|gb|ADY00412.1| porphobilinogen deaminase [Vulcanisaeta moutnovskia 768-28] Length = 305 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 88/262 (33%), Positives = 134/262 (51%), Gaps = 8/262 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S L+L + L V P +I + T GD + ++ L IG KG+F Sbjct: 3 IRIATRGSRLSLIQSDIVMRMLRRVE--PNIQFEVIIIRTTGDLVQDKPLYAIGTKGIFE 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+ L+ E D AVHS KD+P+++ GL I+ + PR+ DV + +AL S Sbjct: 61 KEVNLALLKDEADIAVHSLKDLPSEISPGLVIAGFSPRDPPFDVLVVRNDYPSDLMALPS 120 Query: 126 --VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL---- 179 +GTSS+RR+A LL R DIS+ RG ++TR+NKL A+++A AG+ RL Sbjct: 121 GAKVGTSSVRRRAFLLSVRKDISINVIRGNVDTRINKLIRGDYDAVVIAEAGLVRLINDM 180 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 K + + ++ PP+PGQG I + T + +L++ + ERAFL Sbjct: 181 KSLHIRYARIPLDLLPPAPGQGIIAVVTREKDTNLIDLLRKASDPKAMVEALAERAFLRT 240 Query: 240 LDGSCKSAIAGFAYCKGSTLYF 261 + G C + G A G+ + F Sbjct: 241 VGGGCHVPVGGIAIYDGNYMEF 262 >gi|158320361|ref|YP_001512868.1| porphobilinogen deaminase [Alkaliphilus oremlandii OhILAs] gi|167008809|sp|A8MGE4|HEM3_ALKOO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|158140560|gb|ABW18872.1| porphobilinogen deaminase [Alkaliphilus oremlandii OhILAs] Length = 296 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 93/289 (32%), Positives = 147/289 (50%), Gaps = 9/289 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+G+R S LA+ ++ + + K P+ I ++ + T GD ++TL +IGGKGLF Sbjct: 3 IRVGSRESKLAVK---QSEIVIEAIRKYDPNIEIELVTMKTTGDIKLDQTLDKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+++ L +D VHS KDMP + + L I A RED RDV + +++K+ Sbjct: 60 IKELDQALYDDRVDITVHSFKDMPMAIDEYLPIVAVSKREDPRDVLV--LPKTVKEPDFS 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IG SS RRK L SV RG + TRL KL+ + AI LA AG+KRL E+ Sbjct: 118 KPIGCSSFRRKIQLQEIYPHCSVEPIRGNVLTRLEKLDRGEFSAITLALAGLKRLGLEER 177 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I I + + P+ QG I ++ + + + ++ WD ER+F+ L+G C Sbjct: 178 ISRIFEVTEILPAACQGVIVVQARKGFDVS--FLSDFHDKEAWDISMAERSFVRTLNGGC 235 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 S +A + K + L G+ + S + H+ + G R +G + A Sbjct: 236 SSPVAAYGEIKDNYLTLTGLYVDSSNSV-HKKTITGARKQGEEMGFNLA 283 >gi|13627125|sp|Q49808|HEM3_MYCLE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 315 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 87/275 (31%), Positives = 141/275 (51%), Gaps = 14/275 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L + P +VI+ +T GD+ ++ ++ +G G+FT Sbjct: 2 IRIGTRGSLLATTQAALVRDAL--IANGHPAELVIV--NTAGDQ-SSASIDSLG-VGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + G +D AVHS KD+PT ++A PR D RD ++ L +L S Sbjct: 56 TALRAAIEEGCVDAAVHSYKDLPTADDPRFTVAAIPPRNDPRDAVVTRDELVLAELPAGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + + Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDEV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ P+P QGAI +E + + ++ ++ DT +V ER LAEL+ C Sbjct: 176 TETLDPVQMVPAPAQGAIAVECRAGDSRLVAVLAALDDADTRAAVTAERVLLAELEAGCS 235 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 + + A S + +G++F E+S G Sbjct: 236 APVGAIAQVVES--------IDGEGRVFEELSLRG 262 >gi|15828303|ref|NP_302566.1| porphobilinogen deaminase [Mycobacterium leprae TN] gi|221230780|ref|YP_002504196.1| porphobilinogen deaminase [Mycobacterium leprae Br4923] gi|13093996|emb|CAC31937.1| porphobilinogen deaminase [Mycobacterium leprae] gi|219933887|emb|CAR72519.1| porphobilinogen deaminase [Mycobacterium leprae Br4923] Length = 318 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 87/275 (31%), Positives = 141/275 (51%), Gaps = 14/275 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L + P +VI+ +T GD+ ++ ++ +G G+FT Sbjct: 5 IRIGTRGSLLATTQAALVRDAL--IANGHPAELVIV--NTAGDQ-SSASIDSLG-VGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + G +D AVHS KD+PT ++A PR D RD ++ L +L S Sbjct: 59 TALRAAIEEGCVDAAVHSYKDLPTADDPRFTVAAIPPRNDPRDAVVTRDELVLAELPAGS 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + + Sbjct: 119 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDEV 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ P+P QGAI +E + + ++ ++ DT +V ER LAEL+ C Sbjct: 179 TETLDPVQMVPAPAQGAIAVECRAGDSRLVAVLAALDDADTRAAVTAERVLLAELEAGCS 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 + + A S + +G++F E+S G Sbjct: 239 APVGAIAQVVES--------IDGEGRVFEELSLRG 265 >gi|50841792|ref|YP_055019.1| porphobilinogen deaminase [Propionibacterium acnes KPA171202] gi|289424694|ref|ZP_06426477.1| hydroxymethylbilane synthase [Propionibacterium acnes SK187] gi|289428901|ref|ZP_06430581.1| hydroxymethylbilane synthase [Propionibacterium acnes J165] gi|295129869|ref|YP_003580532.1| hydroxymethylbilane synthase [Propionibacterium acnes SK137] gi|50839394|gb|AAT82061.1| porphobilinogen deaminase, HemC [Propionibacterium acnes KPA171202] gi|289155391|gb|EFD04073.1| hydroxymethylbilane synthase [Propionibacterium acnes SK187] gi|289157902|gb|EFD06125.1| hydroxymethylbilane synthase [Propionibacterium acnes J165] gi|291376805|gb|ADE00660.1| hydroxymethylbilane synthase [Propionibacterium acnes SK137] Length = 366 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 90/267 (33%), Positives = 131/267 (49%), Gaps = 26/267 (9%) Query: 6 FRIGTRCSPLALAH----AFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 R+GTR S LA A RS +DV+ + ++T GD T +L +GG Sbjct: 36 IRLGTRASTLATTQSEMVAGLLRSEGLDVN--------LTTITTHGDTSTA-SLAAMGGI 86 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F I L+ GE D AVHS KD+PT GL I A R D RD ++ +L DL Sbjct: 87 GVFASAIRAALLEGEADIAVHSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDL 146 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--------NNNKA--HAILL 171 + +GT S RR A LL R D++++D RG ++TRL ++ N K A++L Sbjct: 147 PQEASVGTGSPRRAAQLLAVRPDLTIVDIRGNVDTRLGRVKGLGRYAKNGGKEDLDAVVL 206 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED---TWD 228 A +G+ RL + E L+ P+P QGA+ +E + + +L K + D T Sbjct: 207 AASGLARLGHSGAVTEFLDPSVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTRL 266 Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCK 255 + ERA L+ L+ C + I A K Sbjct: 267 AATAERAVLSHLEAGCAAPIGALAQLK 293 >gi|213964875|ref|ZP_03393074.1| porphobilinogen deaminase [Corynebacterium amycolatum SK46] gi|213952411|gb|EEB63794.1| porphobilinogen deaminase [Corynebacterium amycolatum SK46] Length = 310 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 93/294 (31%), Positives = 154/294 (52%), Gaps = 11/294 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+++ + P +VI+ T GD + + +IG G+FT Sbjct: 7 IRIGTRGSELATTQAGHVRDALIELGQ--PAELVIV--KTAGDHNRHDPVEKIG-IGVFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + L G D VHS KD+PT + ++A R D R+ IS A L DL + Sbjct: 62 QALRHALREGVCDIIVHSFKDLPTVPEDDMMVAAVPERVDPREALISRDATPLMDLPEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTS+ RR + L RSD+ ++ RG IETR+ +++ + A++LA AG++R + I Sbjct: 122 RVGTSAPRRVSQLRALRSDLELVPLRGNIETRMGRVSED-LDAVILARAGLERTGRLGEI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+++ P+P QGA+ +E + + ++++ I+H + ERA L +L+ C Sbjct: 181 AESLDVDVLMPAPAQGALALECRTADREIVDILRKIDHPVSHARAVAERAVLNKLEAGCT 240 Query: 246 SAIAGFAYCKGS-TLYFYGIVLASDG--KIFHEVSRNGNRCDAINIGRDAAQYI 296 + +A +A S L V A DG ++ + N ++ D +GR A + Sbjct: 241 APVAAYATVSDSGELTLQAGVFALDGSRQLLETATANVDKAD--ELGRKVAAAL 292 >gi|169631071|ref|YP_001704720.1| porphobilinogen deaminase [Mycobacterium abscessus ATCC 19977] gi|238054424|sp|B1MHI5|HEM3_MYCA9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|169243038|emb|CAM64066.1| Porphobilinogen deaminase (HemC) [Mycobacterium abscessus] Length = 306 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 143/289 (49%), Gaps = 22/289 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L + H ++ ++T GD+ + E G G+FT Sbjct: 2 IRIGTRGSLLATTQAGGIRDAL----RAKGHEAELVIVTTAGDQ--SAAPVEQIGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + +D AVHS KD+PT I A PRED RD ++ L +L S Sbjct: 56 AALREAIADDVVDVAVHSYKDLPTAADPRFVIPAIPPREDYRDALVARDGLVLGELPAGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS RR A L + + RG ++TRL++++N +++A AG+ R+ + I Sbjct: 116 VIGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLSRVSNGDLDGVVVARAGLARIGRLDHI 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV---INHEDTWDSVNCERAFLAELDG 242 E L P+P QGA+ +E +A +LV V ++H DT +V ERA LAEL+ Sbjct: 176 TETLEPVQVLPAPAQGALAVECR---SEATDLVAVLAELDHADTRAAVTAERALLAELEA 232 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 C + + A S + +G++F E+S G C A G D Sbjct: 233 GCTAPVGAIAEVVES--------IDEEGRVFDELSLRG--CAAALDGSD 271 >gi|254821058|ref|ZP_05226059.1| porphobilinogen deaminase [Mycobacterium intracellulare ATCC 13950] Length = 315 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 87/275 (31%), Positives = 137/275 (49%), Gaps = 14/275 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ + H ++ ++T GDR + E G G+FT Sbjct: 2 IRIGTRGSLLATTQAGVVRDALIALG----HPAELVTITTAGDRSSGPI--ESLGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + G +D AVHS KD+PT ++A R D RD ++ L +L S Sbjct: 56 TALREAMEEGRVDAAVHSHKDLPTADDPRFAVAAIPVRNDPRDAVVARDGLVLGELPPGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + + Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDDV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ +E + + ++ ++ DT SV ER LAEL+ C Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAGDTRLAAVLAELDDADTRASVTAERTLLAELEAGCS 235 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 + + A S + +G+IF E+S G Sbjct: 236 APVGAIAEVVES--------IDEEGRIFEELSLRG 262 >gi|323484735|ref|ZP_08090094.1| porphobilinogen deaminase [Clostridium symbiosum WAL-14163] gi|323401972|gb|EGA94311.1| porphobilinogen deaminase [Clostridium symbiosum WAL-14163] Length = 297 Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 88/259 (33%), Positives = 139/259 (53%), Gaps = 8/259 (3%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKI-PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LA+ ++ + ++ ++ P + ++ + T GD I +++L +IGGKGLF Sbjct: 7 RIGSRESVLAV---IQSELIIEEIKRVCPGVSAQLVTMKTTGDMILDKSLEQIGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+++ L+ G D VHS KDMP ++ + L I AY RED RDV + + L+ L Sbjct: 64 KELDRALLDGRCDLTVHSLKDMPMEVPERLPILAYSKREDKRDVLVLR--KGLESLPAGP 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGT S RR+ R D RG + TRL KL++ + A++LA AG+ R+ E I Sbjct: 122 VIGTFSRRRRMQAARLYPDAVFKGIRGNLVTRLRKLDDGEYDALILAAAGLIRMGFEGRI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++++ PS GQG + ++ + +K ++ D+ ERAF+ LDG C Sbjct: 182 SRYFSVDEIIPSAGQGIMAVQGRKED--YFPFMKEVDAPDSRAMALAERAFVRILDGGCS 239 Query: 246 SAIAGFAYCKGSTLYFYGI 264 S A A LY G+ Sbjct: 240 SPCAACAEAAAGRLYLRGL 258 >gi|300779915|ref|ZP_07089771.1| hydroxymethylbilane synthase [Corynebacterium genitalium ATCC 33030] gi|300534025|gb|EFK55084.1| hydroxymethylbilane synthase [Corynebacterium genitalium ATCC 33030] Length = 295 Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 91/292 (31%), Positives = 142/292 (48%), Gaps = 11/292 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+ TR S LA A R +L+ H+ + ++T GD ++ E G G+FT Sbjct: 5 LRVATRGSKLATTQAGHIRDALISAG----HSAELTIVTTAGD--MSQAPVERIGVGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124 I + L GE D AVHS KD+PT + +P RED R+ I+ L DL Sbjct: 59 TAIRQALFDGEADVAVHSFKDLPTAHEPRTHL--IIPVREDRREALIARDGLKLADLPSG 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTS+ RR A L R D+ + RG IE+R+ ++ + + A++LAYAG+ R+ + Sbjct: 117 ARVGTSAPRRIAQLRAKRPDLDIHPLRGNIESRMGRVTSGELDAVVLAYAGMSRVGLGER 176 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E+ EDF P+P QGA+ +E + +A + + + ER LA L+ C Sbjct: 177 ATEVFAPEDFMPAPAQGALAVECRAEDAQAVAAIDTLVDDFATRCALTERFVLATLEAGC 236 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + +A A G + G V A DG ++ R + D +G+ AQ + Sbjct: 237 TAPVAASAVLDGDEITVRGGVFALDGSA--QLVREASGTDPREVGQACAQQL 286 >gi|163787007|ref|ZP_02181454.1| porphobilinogen deaminase [Flavobacteriales bacterium ALC-1] gi|159876895|gb|EDP70952.1| porphobilinogen deaminase [Flavobacteriales bacterium ALC-1] Length = 526 Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 90/269 (33%), Positives = 142/269 (52%), Gaps = 9/269 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LA+ A +S L + H V++P+ + GD + ++ L E+G G+ Sbjct: 3 KIIRIGTRDSQLAMWQAKTVQSQLEHLG----HKTVLVPVKSTGDLVLDKPLYELGITGI 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ ++ +++ +ID AVHS KD+PT L KG+ +A L R +I D + + A Sbjct: 59 FTKTLDIAMLNEDIDIAVHSLKDVPTILPKGIVQAAVLKRGNINDTLVYKANEEFLS-AR 117 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKKE 182 +VI T SLRR+A L +++ RG + +RL KL N+ +A + A AG+ RL Sbjct: 118 DAVIATGSLRRRAQWLNRYPTHTIVGLRGNVNSRLEKLETNEDWNAAIFAGAGLGRLGIT 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + +N+ P+P QGAI I ++ + + + IN E + ER FL L+G Sbjct: 178 P--ENSINLHWMIPAPAQGAIMITALESDEETRAICAEINDEVSEICTTIEREFLNRLEG 235 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDG 270 C + I Y K + F G++L+ DG Sbjct: 236 GCTAPIGAICYINKEEEVNFKGVLLSKDG 264 >gi|317179367|dbj|BAJ57155.1| porphobilinogen deaminase [Helicobacter pylori F30] Length = 306 Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 98/282 (34%), Positives = 150/282 (53%), Gaps = 5/282 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANHIKERLKKECSIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + + Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + + Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++E+ PS GQGA+ +E ++ L K +N E++ + ER F+ L+G C+ Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKSHKHFATLQK-LNDEESAFCCHLERKFIKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 I A G + ++ +GK + G++ A ++ Sbjct: 242 PIGVHASLTGDRVKIRAVLGLPNGKEVITKEKQGDKTRAFDL 283 >gi|332666630|ref|YP_004449418.1| porphobilinogen deaminase [Haliscomenobacter hydrossis DSM 1100] gi|332335444|gb|AEE52545.1| porphobilinogen deaminase [Haliscomenobacter hydrossis DSM 1100] Length = 300 Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 89/259 (34%), Positives = 139/259 (53%), Gaps = 12/259 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIGTR S LAL A TR L + +VII + + N + +I GKG Sbjct: 3 QTIRIGTRGSKLALWQAEFTREKLREAGY--ASELVIIKTTGDNTQHLNLSFDKIEGKGF 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD--- 120 FT+EIE L+ G++D AVHS KDMPT GL ++A RED D + +SL++ Sbjct: 61 FTKEIEDALLRGDVDMAVHSMKDMPTSSPDGLVLTAVSYREDPADWLLVRK-ESLEEGQR 119 Query: 121 --LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L + ++GTSS RRKA +L R D ++ D RG + TR++KL + AI+LA AG+ R Sbjct: 120 FQLKQNPIVGTSSARRKAQILDLRPDATLKDIRGNVPTRVDKLLQGEFDAIMLAAAGLSR 179 Query: 179 LKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 L+ + ++ + +F P+P QG + + + ++ ++ ++H D N ER Sbjct: 180 LELDLSAVHVVKFDPREFIPAPAQGVLAYQACTEDKVIRKALQHLHHSDVSLVTNIERRI 239 Query: 237 LAELDGSCKSAIAGFAYCK 255 L ++G C+ + YC+ Sbjct: 240 LQLMEGGCQMPLG--VYCE 256 >gi|29831283|ref|NP_825917.1| porphobilinogen deaminase [Streptomyces avermitilis MA-4680] gi|39931482|sp|Q82E76|HEM31_STRAW RecName: Full=Porphobilinogen deaminase 1; Short=PBG 1; AltName: Full=Hydroxymethylbilane synthase 1; Short=HMBS 1; AltName: Full=Pre-uroporphyrinogen synthase 1 gi|29608398|dbj|BAC72452.1| putative porphobilinogen deaminase [Streptomyces avermitilis MA-4680] Length = 324 Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 92/312 (29%), Positives = 158/312 (50%), Gaps = 24/312 (7%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIG 59 M ++ R+GTR S LA+A + + ++ V P + ++ ++T GD T+R L +IG Sbjct: 1 MSEQALRLGTRRSKLAMAQSGQVADAVRQVTGRP---VELVEITTYGD--TSREHLAQIG 55 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G G+F + L+ GE+D AVHS KD+PT L ++A RED RDV ++ + + Sbjct: 56 GTGVFVTALRDALLRGEVDFAVHSLKDLPTAQPDELALAAVPVREDPRDVLVARDGLTFE 115 Query: 120 DLALHSV-----IGTSSLRRKALLLRW-RS---DISVIDFRGKIETRLNKLNNNKAHAIL 170 +L S +GT S RR A L + RS + + RG +++R+ + + + ++ Sbjct: 116 ELGAPSPKGTARVGTGSPRRMAQLNAYARSHGLAVETVPIRGNVDSRIGYVRSGELDGVV 175 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 LA AG+ R+ + + E L ++ P+PGQGA+ IE +N + ++ T +V Sbjct: 176 LAAAGLHRIGRIDEVTEFLPVDTVLPAPGQGALAIECAADNADLIAALAELDDPFTRAAV 235 Query: 231 NCERAFLAELDGSCKSAIAGFA--YCKG---STLYFYGIVLASDGKIFHEVSRNG----N 281 ER+ LA L+ C + + A G + + G+V +DG ++S G Sbjct: 236 TAERSLLAALEAGCSAPVGALADLLADGQIVTEMRLRGVVGTTDGSTLVQLSTTGPVPET 295 Query: 282 RCDAINIGRDAA 293 A+ +GR+ A Sbjct: 296 HDQAMALGRELA 307 >gi|254778943|ref|YP_003057048.1| porphobilinogen deaminase [Helicobacter pylori B38] gi|254000854|emb|CAX28786.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Helicobacter pylori B38] Length = 306 Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 152/289 (52%), Gaps = 7/289 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK IG+R S LAL A + L I I + TKGD+I + L +IGG Sbjct: 1 MEK--LVIGSRGSELALWQANHIKERLKKECLIESE---IQIVKTKGDKILDTPLNKIGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L Sbjct: 56 KGLFTKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMS 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL Sbjct: 116 LPKGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLN 175 Query: 181 KEKV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ ++E+ PS GQGA+ +E N+ L K +N E++ + ER F+ Sbjct: 176 IQGAKYRKAFSVEEMIPSMGQGALGVEMLKNHKHFITLQK-LNDEESAFCCHLEREFIKG 234 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 L+G C+ I A G + ++ +GK + G++ A ++ Sbjct: 235 LNGGCQIPIGVHASLMGDGVKIQAVLGLPNGKEVITKEKRGDKTKAFDL 283 >gi|328863687|gb|EGG12786.1| hypothetical protein MELLADRAFT_114915 [Melampsora larici-populina 98AG31] Length = 430 Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 103/294 (35%), Positives = 141/294 (47%), Gaps = 30/294 (10%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P IGTR S LAL A R H P H I +ST GD+ R L +GGK L+ Sbjct: 44 PIVIGTRNSRLALVQAELVRKLFEISH--PNHPTTIQSMSTAGDQNQGRPLYLMGGKSLW 101 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T+E+E L+ G +D VH KDMPT L G ++ A L RED RD + +SL +L Sbjct: 102 TKELEVALLEGSVDLIVHCLKDMPTSLPPGCELGAILEREDPRDALVIRRDLPFRSLSEL 161 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRL 179 SVIGTSS+RR A L R + D RG + TR KL+ ++ I+LA AG+ RL Sbjct: 162 PAGSVIGTSSVRRVAQLRRRFPQLKFQDIRGNLNTRFRKLDAPDSPYTGIVLAVAGLNRL 221 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVN------NPKA-------QELVKVINHEDT 226 + I L+ + + GQGAI IE P+A ++LVK + H T Sbjct: 222 ECADRISSYLSPPELYYAVGQGAIGIEIRSRAEEGEVTPRASQRTETVRQLVKSLEHWPT 281 Query: 227 WDSVNCERAFLAELDGSCKSAIAGFA----------YCKGSTLYFYGIVLASDG 270 + ER+ L L+G C + + + + L G+V + DG Sbjct: 282 ALVCHAERSLLRTLEGGCSVPVGVTSTLLPLPMPCQWAPQARLTLTGVVTSVDG 335 >gi|239942156|ref|ZP_04694093.1| porphobilinogen deaminase [Streptomyces roseosporus NRRL 15998] gi|239988619|ref|ZP_04709283.1| porphobilinogen deaminase [Streptomyces roseosporus NRRL 11379] gi|291445603|ref|ZP_06584993.1| porphobilinogen deaminase 1 [Streptomyces roseosporus NRRL 15998] gi|291348550|gb|EFE75454.1| porphobilinogen deaminase 1 [Streptomyces roseosporus NRRL 15998] Length = 328 Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 95/306 (31%), Positives = 157/306 (51%), Gaps = 19/306 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIGGKGL 63 P R+GTR S LA+A + + V ++ + ++ ++T GD T+R L +IGG G+ Sbjct: 14 PLRLGTRRSKLAMAQSGLVAEA---VREVTGRAVELVEITTYGD--TSREHLAQIGGTGV 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F + + L GE+D AVHS KD+PT L ++A RED RD ++ + + L Sbjct: 69 FVAALREALARGEVDFAVHSLKDLPTSQPDELVLAAVPQREDPRDALVARDGLTFEQLPD 128 Query: 124 HSVIGTSSLRRKALLLRW-RSD---ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 + IGT S RR A L + RS I + RG ++TR+ + + + A++LA AG+ RL Sbjct: 129 GARIGTGSPRRMAQLNAYARSHGLRIETVPIRGNVDTRIGFVRDGELDAVVLAAAGLSRL 188 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + + L ++ P+PGQGA+ IE ++ + ++ T +V ERA LA Sbjct: 189 GRTGEVTDFLPVDTVLPAPGQGALAIECAASSADLAAALAELDDPYTRVAVTAERALLAA 248 Query: 240 LDGSCKSAIAGFA--YCKG---STLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGR 290 L+ C + + A G + L G+V ++DG ++S G + DA +GR Sbjct: 249 LEAGCSAPVGALADVLVDGHVVNELRLRGVVGSTDGSSLVQLSTTGPVPTSHDDAAALGR 308 Query: 291 DAAQYI 296 + A + Sbjct: 309 ELASEM 314 >gi|331699360|ref|YP_004335599.1| Porphobilinogen deaminase [Pseudonocardia dioxanivorans CB1190] gi|326954049|gb|AEA27746.1| Porphobilinogen deaminase [Pseudonocardia dioxanivorans CB1190] Length = 327 Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 81/253 (32%), Positives = 128/253 (50%), Gaps = 12/253 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+A + + + D + H + ++P+ST GDR + + E+G G+F Sbjct: 5 LRIGTRPSALAMAQSGQ----IADRLRAAGHTVELVPVSTVGDR-SGAPVAELG-VGVFV 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + SGE+D A+HS KD+PT L + A RED RD ++ + L +L S Sbjct: 59 SAVRDAVASGEVDVAIHSYKDLPTAPDPRLTLVAVPGREDPRDALVARDGKVLGELPAGS 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT S RR A L + V+ RG ++TR+ K+ + + +++A AG++RL + Sbjct: 119 RVGTGSARRTAQLQALGLGLEVVPIRGNVDTRIGKVTSGELDGVIVAAAGLRRLGRIGEA 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD------SVNCERAFLAE 239 E+L P+P QGA+ +E P + E + D +V ERA LA Sbjct: 179 TELLEPVQMLPAPAQGALAVECRAGVPGSTEHGLALALTALLDDPAARAAVTAERAVLAS 238 Query: 240 LDGSCKSAIAGFA 252 L+ C + I A Sbjct: 239 LEAGCTAPIGALA 251 >gi|308182412|ref|YP_003926539.1| porphobilinogen deaminase [Helicobacter pylori PeCan4] gi|308064597|gb|ADO06489.1| porphobilinogen deaminase [Helicobacter pylori PeCan4] Length = 306 Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 100/289 (34%), Positives = 153/289 (52%), Gaps = 7/289 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK IG+R S LAL A + L + ++ T GD+I + L +IGG Sbjct: 1 MEK--LVIGSRGSELALWQANHIKERLKKECSMESEIQIV---KTTGDKILDAPLNKIGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L Sbjct: 56 KGLFTKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACTTKRADVRDTFLSMKFPDLMS 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ Sbjct: 116 LPKGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLE 175 Query: 181 KEKV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ ++E+ PS GQGA+ +E ++ L K +N E++ + ERAF+ Sbjct: 176 IQGAKYRKAFSVEEMIPSMGQGALGVEMLKSHKHFATLQK-LNDEESAFCCHLERAFIKG 234 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 L+G C+ I A G + ++ +GK + G++ A ++ Sbjct: 235 LNGGCQIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDL 283 >gi|171692929|ref|XP_001911389.1| hypothetical protein [Podospora anserina S mat+] gi|170946413|emb|CAP73214.1| unnamed protein product [Podospora anserina S mat+] Length = 341 Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 98/259 (37%), Positives = 134/259 (51%), Gaps = 13/259 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+ +IGTR S LALA ++L P + ++T GDR L +G K Sbjct: 3 EEYTVKIGTRRSALALAQTDLVIAALSKAAG-PSVKFEVHSMATMGDRDKTTPLPSLG-K 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ----- 116 GL+T E+E KL++ E+D VHS KDMPT L +G + A RED RDV + Q Sbjct: 61 GLWTSELEAKLVNKEVDVIVHSLKDMPTSLPEGCVLGAVTQREDARDVVVFPRRQGGEYK 120 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYA 174 +LKDL SV+GTSS+RR A L R + D RG I+TRL K + N AI+LA A Sbjct: 121 ALKDLPEGSVVGTSSVRRAAQLKRSYKGLVFRDVRGNIDTRLAKCDDENGGYDAIILAAA 180 Query: 175 GIKRLKKEKVIKEILNIE----DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 G+ RL ++ I + L + GQGA+ +E + K EL+K EDT + Sbjct: 181 GLLRLGYDERIGQYLESSTEGGGLLHAVGQGALGLEIREGDEKIAELIKAAVDEDTMMAA 240 Query: 231 NCERAFLAELDGSCKSAIA 249 ER+ + L+G C I Sbjct: 241 FAERSVMRTLEGGCSVPIG 259 >gi|261839094|gb|ACX98859.1| porphobilinogen deaminase [Helicobacter pylori 52] Length = 306 Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 98/282 (34%), Positives = 150/282 (53%), Gaps = 5/282 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANHIKERLKKECLIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + + Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + + Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++E+ PS GQGA+ +E ++ L K +N E + + ER F+ L+G C+ Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKSHKHFATLQK-LNDEKSAFCCHLEREFVKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 I A G + ++ +GK + G++ A+++ Sbjct: 242 PIGVHASLMGDRVKIQAVLGLPNGKEVITKEKQGDKTKALDL 283 >gi|163848145|ref|YP_001636189.1| porphobilinogen deaminase [Chloroflexus aurantiacus J-10-fl] gi|222526046|ref|YP_002570517.1| porphobilinogen deaminase [Chloroflexus sp. Y-400-fl] gi|163669434|gb|ABY35800.1| porphobilinogen deaminase [Chloroflexus aurantiacus J-10-fl] gi|222449925|gb|ACM54191.1| porphobilinogen deaminase [Chloroflexus sp. Y-400-fl] Length = 324 Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 153/296 (51%), Gaps = 18/296 (6%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LA + +L P + + +ST GDR+ + L+ +G KGLF +E Sbjct: 6 LGTRGSALARVQSVWVADALR--TAFPSLEVELRIISTTGDRVLDVALSAVGDKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL---H 124 +E L++ E+D VHSAKDMPT GL ++A+ R D RDV + A DLA Sbjct: 64 LEHALLASEVDLCVHSAKDMPTATPDGLVLAAFPVRVDPRDVLVVRQAGLGTDLATLPAG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK---- 180 + +GTSSLRR + + R D+ + D RG ++TRL KL + + A++LA AG++RL Sbjct: 124 ARVGTSSLRRTSQVRHHRPDLQLTDVRGNVDTRLRKLASGQYDALILAAAGLRRLGLWDG 183 Query: 181 ------KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 E V+ L P+ QG + IET ++ + LV+ ++ + ER Sbjct: 184 TPGAQIGEAVVYP-LEPSVMLPAVAQGILAIETRADDEATRTLVESLDDPAARAAALAER 242 Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCDAINI 288 A L L+G C+ +A A + ++ G+V DG +F E + + + +A+ + Sbjct: 243 ALLRRLEGGCQIPVAAHAVMTDTGMHLRGMVGTLDGSTLVFAEQTGDPAQAEALGV 298 >gi|307353670|ref|YP_003894721.1| porphobilinogen deaminase [Methanoplanus petrolearius DSM 11571] gi|307156903|gb|ADN36283.1| porphobilinogen deaminase [Methanoplanus petrolearius DSM 11571] Length = 292 Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 94/292 (32%), Positives = 151/292 (51%), Gaps = 18/292 (6%) Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 GTR S LALA L D+ + +ST GD +TN L ++GG+G+F + + Sbjct: 6 GTRASKLALAQTKRVSRMLYDLE----IETQVKKISTSGDNVTNVPLHKVGGQGIFVKAL 61 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128 + ++ GEID AVHS KD+P K G+ A L R+ D + + LK++ ++G Sbjct: 62 DDAILEGEIDFAVHSMKDIPAKRPDGVVTCAILKRDSPADFLVHYC--PLKEV---KIVG 116 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188 TSS RR+A LR D+ V + RG ++TR+ KL + AI+LA AG++RL + + Sbjct: 117 TSSTRRRAQFLRGGLDVEVKELRGNVDTRIRKLKEGEYDAIVLAEAGMERLGLDLPGTRL 176 Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248 L + PSP QG I + ++P+ + + +NHE T + ERA + E+ G C + Sbjct: 177 LP-QWHVPSPNQGIIAVVCR-DDPELIKTFEPLNHEQTRMDASVERAVMEEIGGGCYTPQ 234 Query: 249 AGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +C+ + VL+ DGK + + +G+ ++ R Q +R I Sbjct: 235 G--VFCEDG--FLIAEVLSLDGKRWERIEDDGS---SVEEARLIGQKLRSIG 279 >gi|332673079|gb|AEE69896.1| hydroxymethylbilane synthase [Helicobacter pylori 83] Length = 306 Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 97/282 (34%), Positives = 150/282 (53%), Gaps = 5/282 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANHIKERLKKECSIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + + Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR L R D+ RG ++TRL KL + AI+LA G+ RL+ + + Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEVGLCRLEIQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++E+ PS GQGA+ +E ++ L K +N E++ + ER F+ L+G C+ Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKSHKHFATLQK-LNDEESAFCCHLEREFVKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 I A G + ++ +GK + G++ A+++ Sbjct: 242 PIGVHASLMGDRVKIRAVLGLPNGKEVIAKEKQGDKTKALDL 283 >gi|325846167|ref|ZP_08169236.1| hydroxymethylbilane synthase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481646|gb|EGC84682.1| hydroxymethylbilane synthase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 779 Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 95/299 (31%), Positives = 150/299 (50%), Gaps = 6/299 (2%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +IG+R S LAL A + + D+ + I+ +STKGDRI +R + ++ KG+F Sbjct: 3 KIGSRASKLALIQA----NMVKDILEKEGLEAQIVEISTKGDRIRDRKIDQLNSKGVFVR 58 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE+KL+ ID AVHS KDMP+++ L + L ED RD F+ D +++ Sbjct: 59 EIEEKLLDKTIDLAVHSLKDMPSQIDDRLIFTPPLKGEDPRDCFVGKDIFKKMDDLNNAL 118 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GT S RR + ++I RG +ETR+ K+ + ++LA +G+ R + I Sbjct: 119 VGTGSNRRVCQGKNYFTNIKFKAIRGNVETRIKKVQSENLDGVILAKSGLIRAGLDGEIN 178 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ F PSP QG + IE + K E+ K + E T + ERAF EL C + Sbjct: 179 FDLDPHIFTPSPCQGILGIEIRKEDKKLFEIFKKNSDEKTLFRMETERAFQKELGADCST 238 Query: 247 AIAGFAYCKGSTLYFYG-IVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + F + G + D +I +E +GN D IN+ + A+ ++ S K + Sbjct: 239 PMGIFTEIDHDKITLTGSMAFDKDDRINYE-KVSGNISDRINLAQKLARTLKKKSYKKI 296 >gi|311111780|ref|YP_003983002.1| hydroxymethylbilane synthase [Rothia dentocariosa ATCC 17931] gi|310943274|gb|ADP39568.1| hydroxymethylbilane synthase [Rothia dentocariosa ATCC 17931] Length = 371 Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 100/331 (30%), Positives = 148/331 (44%), Gaps = 71/331 (21%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN-------------IVIIPLSTKGDRIT 51 P+ +GTR S LAL T+S+L H + N I + T GD +T Sbjct: 4 PYILGTRGSALAL-----TQSTLAAEHIVQMFNAHSREHGAERTLSFDITTVKTDGDVLT 58 Query: 52 NRTLTEIGGKGLFTEEIEKKLISGE----IDCAVHSAKDMPTKLLKGLQISAYLPREDIR 107 L +GG G+F + ++L+ G+ +D AVHS KD+P + GL I+A L RED R Sbjct: 59 G-PLATLGGTGVFAAALRQRLLDGDTPDGVDVAVHSLKDLPAEPCPGLVIAAILEREDPR 117 Query: 108 DVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH 167 D ++ +L L + +GT S RR A + R D+ ++D RG + TR+ ++ + H Sbjct: 118 DALVARDNLTLDTLPTGARVGTGSPRRAAQVHALRPDLEIVDIRGNVGTRIARVKGLEEH 177 Query: 168 ------------------------------AILLAYAGIKRLKKEKVIKEILNIEDFPPS 197 A++LA +G+KRL KE VI E L+ P+ Sbjct: 178 GNRQVIVRDSAETDEAAHRGIGTENTGDCDAVILAVSGLKRLGKESVITEYLDPSRMLPA 237 Query: 198 PGQGAICI---ETHVNNPKAQEL--------VKVI-------NHEDTWDSVNCERAFLAE 239 PGQGA+ I ET NP L V+ + +H +T V ER L Sbjct: 238 PGQGALAIEVRETEFANPDTATLFNSEISQPVRTLGEALIAADHFETHLEVTAERRLLRR 297 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 L+ C + I +A K L +V + DG Sbjct: 298 LEAGCAAPIGAYATVKDGDLVLTAVVASPDG 328 >gi|256810719|ref|YP_003128088.1| porphobilinogen deaminase [Methanocaldococcus fervens AG86] gi|256793919|gb|ACV24588.1| porphobilinogen deaminase [Methanocaldococcus fervens AG86] Length = 292 Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 89/254 (35%), Positives = 137/254 (53%), Gaps = 21/254 (8%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + + ++ K +++ I + T GDR+ N+ L++IG G+FT Sbjct: 2 IRIGTRGSKLALYQA----NKVAELLKNLGYDVEIKIIKTTGDRVLNKKLSDIG-IGVFT 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ +++ EID AVHS KD+PT + L + A L R+ D+ I + D Sbjct: 57 KELDLAMLNNEIDIAVHSLKDIPTIWNENLMVGAVLERDSYYDLLIWNKNVDF-DENSEI 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +IGTSSLRR+A L + RG ++TRL KL + AI+L+ AGI RL Sbjct: 116 IIGTSSLRRRAFLKFLYPNARFELLRGNVDTRLKKLKDGLYDAIVLSEAGIIRLG----- 170 Query: 186 KEILNIEDFP-------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 +N++DF P+P QG I + ++ + +E++K INH+ T+ +CERA L Sbjct: 171 ---INLDDFNYKRLNILPAPAQGIIAVACKRDDEEIKEILKEINHKKTYLGSSCERAALN 227 Query: 239 ELDGSCKSAIAGFA 252 + G C A Sbjct: 228 QFGGGCSVPFGALA 241 >gi|300741887|ref|ZP_07071908.1| hydroxymethylbilane synthase [Rothia dentocariosa M567] gi|300381072|gb|EFJ77634.1| hydroxymethylbilane synthase [Rothia dentocariosa M567] Length = 371 Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 99/331 (29%), Positives = 150/331 (45%), Gaps = 71/331 (21%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN-------------IVIIPLSTKGDRIT 51 P+ +GTR S LAL T+S+L H + N I + T GD +T Sbjct: 4 PYILGTRGSALAL-----TQSTLAAEHIVQVFNAHSREHGAERTLSFDITTVKTDGDVLT 58 Query: 52 NRTLTEIGGKGLFTEEIEKKLISGE----IDCAVHSAKDMPTKLLKGLQISAYLPREDIR 107 L +GG G+F + ++L+ G+ +D AVHS KD+P + GL I+A L RED R Sbjct: 59 G-PLATLGGTGVFAAALRQRLLDGDTPGGVDVAVHSLKDLPAEPCPGLVIAAILEREDPR 117 Query: 108 DVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH 167 D ++ +L L + +GT S RR A + R D+ ++D RG + TR+ ++ + H Sbjct: 118 DALVARDNLTLDTLPTGARVGTGSPRRAAQVRALRPDLEIVDIRGNVGTRIARVKGLEEH 177 Query: 168 ------------------------------AILLAYAGIKRLKKEKVIKEILNIEDFPPS 197 A++LA +G+KRL KE VI E L+ P+ Sbjct: 178 GNRQVVVRDSTETDEAAHRGIGTENTGDCDAVILAVSGLKRLGKESVITEYLDPSRMLPA 237 Query: 198 PGQGAICIETH----VN-------NPKAQELVKVI-------NHEDTWDSVNCERAFLAE 239 PGQGA+ IE VN +P+ + V+ + +H +T V ER L Sbjct: 238 PGQGALAIEVRETEFVNPDTATLFDPEISQPVRTLGEALIAADHFETHLEVTAERRLLRR 297 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 L+ C + I +A K L +V + DG Sbjct: 298 LEAGCAAPIGAYATVKDGDLVLTAVVASPDG 328 >gi|232245|sp|P30527|HEM3_YERIN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|48614|emb|CAA47276.1| hydroxymethylbilane synthase [Yersinia intermedia] Length = 183 Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 76/179 (42%), Positives = 103/179 (57%), Gaps = 2/179 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + +D RD F+S + D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPVAFPEGLGLVTICEPDDPRDAFVSPHFAHIDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L S++G SSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+ RL Sbjct: 119 LPAGSIVGNSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRL 177 >gi|261402865|ref|YP_003247089.1| porphobilinogen deaminase [Methanocaldococcus vulcanius M7] gi|261369858|gb|ACX72607.1| porphobilinogen deaminase [Methanocaldococcus vulcanius M7] Length = 295 Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 32/311 (10%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + + ++ K + + II T GD+I N+ L+EIG G+FT Sbjct: 2 LRIGTRGSKLALYQA----NKVAELLKNLGYEVEIIIKKTTGDKILNKKLSEIG-IGVFT 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ L++ EID AVHS KD+PT + L I A L R+ D+ I + L +L Sbjct: 57 KELDLALMNNEIDIAVHSFKDVPTIWNENLMIGAVLERDSYYDLIIWDKNKDL-ELDKEI 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS+RR++ L ++ RG ++TRL KL + AI+L+ AGI RL Sbjct: 116 TVGTSSIRRRSFLKAMYPNVKFKLLRGNVDTRLKKLKEGQYDAIVLSEAGIIRLN----- 170 Query: 186 KEILNIEDF-------PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 +++ DF PSP QG I + ++ K +++++ INH+ T+ CER L Sbjct: 171 ---IDLSDFNYRRLDITPSPAQGVIAVACRRDDNKIKKILERINHKKTFLECLCERTALN 227 Query: 239 ELDGSCKSAIAGFA--------YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 E G C + +T++ G + + GKI E+ + AI +G+ Sbjct: 228 EFGGGCSVPFGALSIYDEDKKILTLKATVFLNGKLKHASGKINCEID---DLDSAITLGK 284 Query: 291 DAAQYIRFISN 301 + ++ + N Sbjct: 285 TIGKRLKDLEN 295 >gi|282853361|ref|ZP_06262698.1| hydroxymethylbilane synthase [Propionibacterium acnes J139] gi|282582814|gb|EFB88194.1| hydroxymethylbilane synthase [Propionibacterium acnes J139] Length = 334 Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 85/263 (32%), Positives = 130/263 (49%), Gaps = 18/263 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + E + L+ + ++ + ++T GD T +L +GG G+F Sbjct: 4 IRLGTRASTLATTQS-EMVARLLRSEGL---DVDLTTITTHGDTSTA-SLAAMGGIGVFA 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 I L+ GE D AVHS KD+PT GL I A R D RD ++ +L DL + Sbjct: 59 SAIRATLLKGEADIAVHSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDLPQEA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------NNNKAHAILLAYAG 175 +GT S RR A LL R D++++D RG ++TRL ++ A++LA +G Sbjct: 119 SVGTGSPRRAAQLLAVRPDLTIVDIRGNVDTRLGRVKGLGHYAKGGGKEDLDAVVLAASG 178 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED---TWDSVNC 232 + RL + E L+ P+P QGA+ +E + + +L K + D T + Sbjct: 179 LARLGHSGTVTEFLDPSVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTRLAATA 238 Query: 233 ERAFLAELDGSCKSAIAGFAYCK 255 ERA L+ L+ C + I A K Sbjct: 239 ERAVLSHLEAGCAAPIGALAQLK 261 >gi|239980250|ref|ZP_04702774.1| porphobilinogen deaminase [Streptomyces albus J1074] Length = 307 Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 84/266 (31%), Positives = 139/266 (52%), Gaps = 18/266 (6%) Query: 30 VHKIPPHNIVIIPLSTKGDRITNRT-LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMP 88 VH++ + ++ ++T GD T+R L +IGG G+F + + L+ GE+D AVHS KD+P Sbjct: 11 VHQLTGRPVELVEITTYGD--TSREHLAQIGGTGVFVAALREALVRGEVDFAVHSLKDLP 68 Query: 89 TKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRW----RSD 144 T L ++A PRED RDV I+ ++L + +GT S RR A L + R Sbjct: 69 TAQPDELVLAAVPPREDPRDVLIARDGLRFEELPEGARVGTGSPRRMAQLNAYARGHRMA 128 Query: 145 ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAIC 204 + + RG I+TR+ + + + A++LA AG+ R+ + + E L+++ P+PGQGA+ Sbjct: 129 VETVPIRGNIDTRIGFVRSGELDAVVLAAAGLHRVGRSDEVTEYLSVDTILPAPGQGALA 188 Query: 205 IETHVNN-----PKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA--YCKGS 257 IE + P A L + ++ T +V ER+ LA L+ C + + A G Sbjct: 189 IECAAGHEADGLPLAAVLAE-LDDPATRAAVTAERSLLAALEAGCSAPVGALADLLADGQ 247 Query: 258 T---LYFYGIVLASDGKIFHEVSRNG 280 + G+V + DG ++S G Sbjct: 248 VVKEMRLRGVVGSPDGSALVQLSTTG 273 >gi|115399989|ref|XP_001215583.1| porphobilinogen deaminase [Aspergillus terreus NIH2624] gi|114191249|gb|EAU32949.1| porphobilinogen deaminase [Aspergillus terreus NIH2624] Length = 337 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 102/321 (31%), Positives = 156/321 (48%), Gaps = 19/321 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + P RIGTR S LA+ A R SL V P + I+ L T GDR L G K Sbjct: 9 QPPLRIGTRRSNLAMVQAEGIRDSLQKVA--PDRSYEIVALRTLGDRDKQTALYNFGAKN 66 Query: 63 LFTEEIEKKLISGEIDCAVH------SAKDMPTKLLKGLQISAYLPREDIRDVFI---SH 113 L+T E+E+KL SGE+D VH +A DMPT L Q++A PR+D RD I S Sbjct: 67 LWTTELEEKLTSGELDVIVHCLKDQLTAPDMPTTLPDTCQLAAIPPRDDPRDALIVKASL 126 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILL 171 SL+ L +V+GTSS+RR A L R + + RG +ETRL K+++ ++ +++ Sbjct: 127 PYTSLQSLPAGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPESEYTCMIM 186 Query: 172 AYAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 + AG++R+ + I + L D + GQGA+ +E + + EL+ + + + Sbjct: 187 SAAGLERVGLQYRINQYLGSRDGGILHAVGQGALGLEIRKGDAQMLELLGQLADRKSTLA 246 Query: 230 VNCERAFLAELDGSCKSAIA-GFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDA 285 ER+ + L+G C I + L + IV++ DG E S+ G +A Sbjct: 247 CLAERSLMKTLEGGCSVPIGVETEWLSSGDLRMHSIVVSLDGTQCVEDSITSKVGTDDEA 306 Query: 286 INIGRDAAQYIRFISNKNVFN 306 G + A + + N Sbjct: 307 AAFGEELAARLVKAGAGQILN 327 >gi|311895212|dbj|BAJ27620.1| putative porphobilinogen deaminase [Kitasatospora setae KM-6054] Length = 304 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 84/244 (34%), Positives = 116/244 (47%), Gaps = 5/244 (2%) Query: 53 RTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS 112 R ++E GG F L+ E+D VHS KD+PT GL + PR D+RD Sbjct: 52 RAVSERGGGSAFAGRQAAALLDREVDVVVHSLKDLPTADPDGLLLLPSPPRADVRDALCG 111 Query: 113 HTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLA 172 L L + +GTS+ RR A LL R D++ RG + TRL +L A++LA Sbjct: 112 ---APLAGLPTGARVGTSAARRIAQLLYVRPDLAPERIRGNVPTRLTRLRT--LDAVVLA 166 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 AG+ RL ++ I E+L + FPPSPGQGA+ I+ ++ A+EL+ T V Sbjct: 167 AAGLHRLGRDGEIAELLPLAQFPPSPGQGALGIQVRADDAMARELLAGTGDPVTDAEVRA 226 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292 ERA LAEL G C + A L +G V G E +G +GR Sbjct: 227 ERAMLAELHGGCSVPVGAHATTADGILTLHGQVTTPRGTRQIEARLSGTSAAPEKLGRAV 286 Query: 293 AQYI 296 A + Sbjct: 287 AGLL 290 >gi|225569053|ref|ZP_03778078.1| hypothetical protein CLOHYLEM_05132 [Clostridium hylemonae DSM 15053] gi|225161852|gb|EEG74471.1| hypothetical protein CLOHYLEM_05132 [Clostridium hylemonae DSM 15053] Length = 298 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/302 (31%), Positives = 148/302 (49%), Gaps = 27/302 (8%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LA+ A + ++ P I+ + T+GD+I +R L GGKGLF Sbjct: 5 IRIGSRESRLAVKQAEIVKQAVE--RNCPDIKAEIVTMKTEGDKILDRRLELAGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+EK L+ G ID VHS KD+P ++ + L + A+ RED RDV I ++ + Sbjct: 63 KELEKALLDGRIDICVHSLKDVPMEVPEDLPVVAFGEREDPRDVLIYKPGRT--SIPEGG 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS RR+ L R + RG ++TRL KL+ +LA AG+KRL E+V Sbjct: 121 VIGTSSRRRELQLKRLYPSCTFRSIRGNVQTRLRKLSEEGFDGTVLAAAGLKRLHMEEVA 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW-DSVNCERA--------- 235 + ++++ P+ GQG + ++ + +W S C ++ Sbjct: 181 GRVFSVDEIIPAVGQGILAVQGRK------------GRDYSWLTSFACGKSRAEAEAERE 228 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 F A L G C S +A A +G+ L G+ G I+ +R G A +G A+ Sbjct: 229 FAAALGGGCTSPVAAHAQAQGAELKLTGLYYCG-GDIYRTRTRTGETDRARQLGAALAEE 287 Query: 296 IR 297 +R Sbjct: 288 MR 289 >gi|196232296|ref|ZP_03131150.1| porphobilinogen deaminase [Chthoniobacter flavus Ellin428] gi|196223664|gb|EDY18180.1| porphobilinogen deaminase [Chthoniobacter flavus Ellin428] Length = 307 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 91/252 (36%), Positives = 134/252 (53%), Gaps = 18/252 (7%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL---TEIGGKGLF 64 +GTR S LA+A T +L P I T+GD+ + +L E GGKGLF Sbjct: 6 LGTRASALAVAQVELTTKAL--AAAFPAMQIERREFVTRGDKKLDLSLLRANEAGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E L++G ID AVHS KD+P GL I+A L R DV I+ Q+L DL Sbjct: 64 TKELEDALLNGSIDVAVHSLKDLPGHNPPGLDITAVLERAPTADVLITKQPQTLLDLPQG 123 Query: 125 SVIGTSSLRRKALLLRW-RSDISVIDFRGKIETRLNKL-NNNKAHAILLAYAGIKRLKKE 182 ++GTSS+RR A L+W R D+ V ++RG ++TRL KL + I+LA AG++RL + Sbjct: 124 VLLGTSSVRR-ARQLQWRRPDVRVEEWRGNVQTRLRKLAERDDVTGIILAQAGLERLGHD 182 Query: 183 KVIKEILN----------IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 + ED P+ GQGAI +++ + + +++ I+H +T ++ Sbjct: 183 LSAGRLETEHGKFYVTSLAEDLLPAIGQGAIALQSRADRAEVAAVLQKIDHRETHLAIRA 242 Query: 233 ERAFLAELDGSC 244 ER L G C Sbjct: 243 ERELQRLLAGDC 254 >gi|242827493|ref|XP_002488841.1| porphobilinogen deaminase, putative [Talaromyces stipitatus ATCC 10500] gi|218712002|gb|EED11431.1| porphobilinogen deaminase, putative [Talaromyces stipitatus ATCC 10500] Length = 413 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 107/342 (31%), Positives = 160/342 (46%), Gaps = 42/342 (12%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLST---KGDRITNRTLTEIG- 59 K R+G+R S +AL ++L H H P+ST +GDR ++ Sbjct: 72 KAVRVGSRNSKMALIQTSSVAAALYKAH----HGFFTFPVSTHSVQGDRDKTSAFRDLAK 127 Query: 60 -----------GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRD 108 K L+T EIE +L++G+ID VHS KD+PT L G +I A+ R D D Sbjct: 128 AHGNKQTAADTAKSLWTLEIEARLLAGDIDLIVHSLKDVPTTLPDGCEIGAFPHRNDPTD 187 Query: 109 VFISHTA---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK 165 + +SL++L SV+GT S+RR A L + + + + RG ++TR+ KL+ N Sbjct: 188 ALLVKAGLPYKSLEELPAGSVVGTCSVRRTAQLRHYCPHLIIQECRGNVDTRVAKLDAND 247 Query: 166 A--HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223 + AI++A AGI RL E I + L+ + + GQGA+ IE + KA+ELV I+H Sbjct: 248 SPYTAIVVAAAGIVRLNLEHRITQRLSGPAYTYAVGQGALGIEIRKEDQKARELVACIDH 307 Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAY-----CKG----------STLYFYGIVLAS 268 T ERA L L G C + I + KG TLY G +L Sbjct: 308 WPTRVRCLAERALLRFLQGGCSAPIGVHSAFVRTPAKGEPNVNDNHYEGTLYLTGTLLHP 367 Query: 269 DGKI---FHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307 DG + HE + D+ IG+ + I + + + Sbjct: 368 DGGMEIRAHEKGQVKCTADSETIGKSVGKKILDLGGAQILDI 409 >gi|291295782|ref|YP_003507180.1| porphobilinogen deaminase [Meiothermus ruber DSM 1279] gi|290470741|gb|ADD28160.1| porphobilinogen deaminase [Meiothermus ruber DSM 1279] Length = 300 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 84/267 (31%), Positives = 145/267 (54%), Gaps = 15/267 (5%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 RI TR S LAL A + L + + ++ + T+GDR +R ++ G+G FT+ Sbjct: 5 RIATRGSRLALWQAGWVQQQLERLGA----QVELVVVETQGDR-ESRPFAQMQGQGFFTK 59 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLAL 123 ++ +++ E D AVHS KD+P+ +GL+I+A RED R++ + ++ L L Sbjct: 60 AVQDAVLNWEADLAVHSFKDLPSARPEGLEIAAVPKREDPRELLLVRPEALDEAAPGLPL 119 Query: 124 HS--VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 S + GTS+ RR+A L + R D+ + + RG + TR++KL + AILLAYAG+KRL+ Sbjct: 120 RSGALAGTSAARRQAQLRQLRPDLGLKELRGNVPTRVDKLRCGEYDAILLAYAGLKRLEL 179 Query: 182 E--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + ++L P+P QGA+ +E ++ + + L++ ++ +V ER + + Sbjct: 180 DLSGLYTQVLPTTVLVPAPAQGALALECRSDDHRLKALLQPLDDPQARRTVEAERGLMQK 239 Query: 240 LDGSCKSAIAGFAYCKGSTLY---FYG 263 L G C+ A+ A L +YG Sbjct: 240 LAGGCQLALGALAQAGPQGLMLLAWYG 266 >gi|300782413|ref|YP_003762704.1| hydroxymethylbilane synthase [Amycolatopsis mediterranei U32] gi|299791927|gb|ADJ42302.1| hydroxymethylbilane synthase [Amycolatopsis mediterranei U32] Length = 309 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 91/298 (30%), Positives = 148/298 (49%), Gaps = 25/298 (8%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG--GKGLFT 65 +GTR S LAL ++ D + + I+ ++T GD+ +L I G G+FT Sbjct: 1 MGTRGSKLALTQT----GTVADALRATGVEVEIVKVTTPGDK----SLAPIATIGVGVFT 52 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + L+ E+D VHS KD+PT G+ ++A PRED RD I+ +L +L S Sbjct: 53 SALREALLRNEVDVIVHSYKDLPTAPEPGITLAAVPPREDPRDALIARDGLTLGELPPGS 112 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT + RR A L + ++ RG I+TR+ K+ + + A++LA AG+ R+ + I Sbjct: 113 TVGTGAARRTAQLRALGLGLEIVPIRGNIDTRMRKVTDGELDAVVLARAGLARVGLVEAI 172 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDGSC 244 E L+ P+P QGA+ +E + + L++ ++ E T +V ERA LA L+ C Sbjct: 173 TETLDPIQMLPAPAQGALAVECRSADVDLEHLLRSTLDDEGTRAAVTAERALLAALEAGC 232 Query: 245 KSAIAGFAYCKGSTLYFYGIV--LASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 + + A IV L ++GK+ +S G AI A +R I+ Sbjct: 233 SAPVGALAE----------IVEDLDAEGKVVERISLRGTA--AIEGEEGAVDMVRAIA 278 >gi|207092595|ref|ZP_03240382.1| porphobilinogen deaminase [Helicobacter pylori HPKX_438_AG0C1] Length = 306 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 99/282 (35%), Positives = 148/282 (52%), Gaps = 5/282 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANHIKERLKKECFIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + + Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + + Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++E+ PS GQGA+ +E N+ L K +N E + ER F+ L+G C+ Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFITLQK-LNDEKSAFCCRLEREFIKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 I A G + ++ +GK + G++ A ++ Sbjct: 242 PIGVHASLMGDRVKIQAVLGLPNGKEAIAKEKQGDKTKAFDL 283 >gi|302349001|ref|YP_003816639.1| Porphobilinogen deaminase [Acidilobus saccharovorans 345-15] gi|302329413|gb|ADL19608.1| Porphobilinogen deaminase [Acidilobus saccharovorans 345-15] Length = 298 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 76/259 (29%), Positives = 140/259 (54%), Gaps = 6/259 (2%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 + T+GD + +R L IG KG+F +E+ + +++GE D AVHS KD+P++L + L+I+ P Sbjct: 40 VKTRGDVMQDRPLFSIGVKGVFEKEVNRAVLNGEADVAVHSMKDLPSQLEEDLEIAMVPP 99 Query: 103 REDIRDVFI----SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRL 158 RE D + S ++D+ +GTSS+RR A L + ++ RG ++TR+ Sbjct: 100 REVPNDSLVIGAGSPEVTGVEDVPSGLSVGTSSVRRIAFLRHYNRNVITKVVRGNVDTRI 159 Query: 159 NKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV 218 KLN + + +L+A AG++RL + + +L ++ FPP PGQG I + ++P +L+ Sbjct: 160 AKLNRGEVNYLLMAEAGLRRLNIPQK-RVMLPLDKFPPEPGQGIIAVVAPSSSP-LFDLL 217 Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR 278 + + E T+ ER F+ + C + I + +G L + DG++ + Sbjct: 218 RRASDEVTYAMAMAERKFVELIGAGCHTPIGAVSILEGGRLAMIAAAASPDGEVMNFARA 277 Query: 279 NGNRCDAINIGRDAAQYIR 297 +G+ + I R+ + ++ Sbjct: 278 SGSLGEPERIARELVENLK 296 >gi|66809519|ref|XP_638482.1| porphobilinogen deaminase [Dictyostelium discoideum AX4] gi|74854142|sp|Q54P93|HEM3_DICDI RecName: Full=Porphobilinogen deaminase; AltName: Full=Heme biosynthesis protein C; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS gi|60467077|gb|EAL65118.1| porphobilinogen deaminase [Dictyostelium discoideum AX4] Length = 325 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 96/311 (30%), Positives = 158/311 (50%), Gaps = 14/311 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LA+ R + +++ P + I + T GD++ + +L++IG KGLFT+E Sbjct: 12 IGSRKSQLAMLQTEWVRDRIQELN--PGIIVEIKTMDTTGDKVLDVSLSKIGDKGLFTKE 69 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-----SLKDLA 122 +E +++G ID AVHS KD+PTKL GL++ A R + D FI++ + L +L Sbjct: 70 LEDMMLNGTIDLAVHSLKDIPTKLPDGLKLGAITKRYNTSDAFIANAKKHGKNCKLSELP 129 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRLK 180 ++IG+SSLRR A L + + D RG + TR KL ++N ++LA AG++R++ Sbjct: 130 QGAMIGSSSLRRVAQLKKAYPHLQFKDIRGNLNTRFKKLEDDSNGYDGMILAVAGLERME 189 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I EI+ + GQG++ IE + Q ++ + H ++ ER+ L +L Sbjct: 190 LTDHISEIIPDSISLYAVGQGSLGIECKDGDDFIQSILNPLIHRESMYCCEAERSMLRDL 249 Query: 241 DGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 +G C I TL IVL DG + E G +G+ AQ Sbjct: 250 EGGCHVPIGVVTKLHNQSQPDETLEINAIVLNLDGSKYIESKIIGPSIQYYQLGKSIAQD 309 Query: 296 IRFISNKNVFN 306 + +K++ + Sbjct: 310 LINKGSKDILS 320 >gi|260941880|ref|XP_002615106.1| hypothetical protein CLUG_05121 [Clavispora lusitaniae ATCC 42720] gi|238851529|gb|EEQ40993.1| hypothetical protein CLUG_05121 [Clavispora lusitaniae ATCC 42720] Length = 356 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 96/315 (30%), Positives = 158/315 (50%), Gaps = 17/315 (5%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +IG R S LA+ + ++ + P + I+ L+T GD++ N+ L GGK L+T+ Sbjct: 17 QIGGRKSRLAVVQSEFVKAGIE--ANFPELSCSILALNTLGDKVQNKPLYSFGGKSLWTK 74 Query: 67 EIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 E+E L+ ++D VHS KDMPT L ++ + RED RD + +SL Sbjct: 75 ELEILLLEAVGDYPQLDMIVHSLKDMPTNLPDEFELGCIVEREDPRDALVVKKGLPFRSL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGI 176 DL +V+GTSS+RR A LL+ + D RG I TRL+KL++ + ++LA +G+ Sbjct: 135 SDLPPGAVVGTSSIRRSAQLLKNYPHLRFEDMRGNIATRLSKLDDPSSPFTCLILAASGL 194 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 RL I L+ D + GQGA+ IE ++ +++ + H + ERA Sbjct: 195 LRLGLGDRISAPLDAPDMYYAVGQGALGIEIRKDDTVMLSVLRKLEHLPSAYCCYAERAM 254 Query: 237 LAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRD 291 + L+G C + + T LYF GI+++ DGK E N+ +A +G + Sbjct: 255 MRMLEGGCSVPLGVKTHYNEQTQQLYFKGIIVSPDGKQSVEAEHTSIIYNKAEAEAVGEE 314 Query: 292 AAQYIRFISNKNVFN 306 A+ + + K + + Sbjct: 315 VARKLTHLGGKKILD 329 >gi|121711982|ref|XP_001273606.1| porphobilinogen deaminase Hem3, putative [Aspergillus clavatus NRRL 1] gi|119401758|gb|EAW12180.1| porphobilinogen deaminase Hem3, putative [Aspergillus clavatus NRRL 1] Length = 333 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 98/305 (32%), Positives = 153/305 (50%), Gaps = 15/305 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA+ A R +L + P + I+ L T GDR + L G K L+ Sbjct: 11 PLRIGTRRSKLAIVQAEGIRDNLQKLS--PDRSFEIVTLHTLGDRDKSTALYSFGAKNLW 68 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDL 121 T E+E+KL SGE+D VH KDMPT L ++A PR+D RD I ++ +L+ L Sbjct: 69 TAELEEKLNSGELDVVVHCLKDMPTTLPDTCDLAAIPPRDDPRDALIIKSSLPYTTLQSL 128 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRL 179 +++GTSS+RR A L R + + RG +ETRL K+++ ++++ AG++RL Sbjct: 129 PAGAIVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPDGEYTCMVMSAAGLERL 188 Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + I + L D + GQGA+ +E + EL+ + E + + ERA + Sbjct: 189 GLQHRISQYLGSRDGGILHAVGQGALGLEIRKGDSATLELLDRLGDEGSTLACLAERALM 248 Query: 238 AELDGSCKSAIA---GFAYCKGSTLYFYGIVLASDG--KIFHEVS-RNGNRCDAINIGRD 291 L+G C I + L IV++ DG + V R ++ +AI +G + Sbjct: 249 RALEGGCSVPIGVETEWVDWAARLLAMRAIVVSLDGTRSVLDSVEVRVQSKEEAIALGEE 308 Query: 292 AAQYI 296 A + Sbjct: 309 LAARL 313 >gi|315044601|ref|XP_003171676.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893] gi|311344019|gb|EFR03222.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893] Length = 335 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 97/293 (33%), Positives = 151/293 (51%), Gaps = 18/293 (6%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K F IGTR S LA+ R++L + + P + GD L E+ K Sbjct: 6 RKTFTIGTRKSNLAVLQTEIVRNAL--IARWPDCQFNVHTRDAAGDLNKVTPLRELTSKN 63 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119 L+TEE+E+ L++ E+D VHS KD+PT++ + ++ A++ RED RD + Q +L Sbjct: 64 LWTEELEEMLLAKELDLVVHSLKDVPTQIPEACKLGAFMKREDPRDALVVKKGQPKTTLA 123 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177 +L SV+GTSS+RR A + R + VID RG I+TRL KL+ I+LA AG+ Sbjct: 124 ELPAGSVVGTSSVRRTAQIGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 183 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R E I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER Sbjct: 184 RTGYEDRISQYLDSKNGKMLHAVGQGALGVEIRADDEKMVEMLREIGDQKTTFACLAERN 243 Query: 236 FLAELDGSCKSAI---------AGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 L L+G C + + A A KG L IV + DG+ EV ++ Sbjct: 244 LLRTLEGGCSAPLGVETEWVPDASDASGKGELLRLRCIVTSVDGREAVEVEKD 296 >gi|229822489|ref|YP_002884015.1| porphobilinogen deaminase [Beutenbergia cavernae DSM 12333] gi|229568402|gb|ACQ82253.1| porphobilinogen deaminase [Beutenbergia cavernae DSM 12333] Length = 334 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 88/264 (33%), Positives = 134/264 (50%), Gaps = 7/264 (2%) Query: 4 KPFRIGTRCSPLALAH---AFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 + R+GTR S LA A E ++ + + ++ ++T GD +T +L +GG Sbjct: 20 RTLRVGTRASALATTQSEWAGEAIAARVAAATGSDVEVELVRVTTTGDVLTG-SLASMGG 78 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L+ G D AVHS KD+PT GL + A RED RDV + L D Sbjct: 79 TGVFVTALREALLDGRCDVAVHSLKDLPTAAAPGLVLGAVPQREDPRDVLCARAGAGLAD 138 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKR 178 L +GT S RR A L R R D+ ++D RG ++TRL++++ K A++LA AG+ R Sbjct: 139 LPAGGRVGTGSPRRAAQLRRARPDLEIVDIRGNVDTRLSRISPGKGDLDAVVLARAGLAR 198 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK-AQELVKVINHEDTWDSVNCERAFL 237 L + + E L+ P+PGQGA+ +E P ++ + T +V ERA L Sbjct: 199 LGRLDAVTEALDAGVMVPAPGQGALAVEAVDAAPDWLLAGLRAFDDAPTRLAVTAERAML 258 Query: 238 AELDGSCKSAIAGFAYCKGSTLYF 261 A L+ C + + A GS L Sbjct: 259 ARLEVGCSAPVGALATLAGSQLLL 282 >gi|116754430|ref|YP_843548.1| porphobilinogen deaminase [Methanosaeta thermophila PT] gi|116665881|gb|ABK14908.1| hydroxymethylbilane synthase [Methanosaeta thermophila PT] Length = 270 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 84/229 (36%), Positives = 129/229 (56%), Gaps = 2/229 (0%) Query: 45 TKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPRE 104 T GD +R L I G+GLF EI+++++SGEID AVHS KD+P+K + L+I+A + R+ Sbjct: 5 TSGDLFLDRPLHMISGQGLFVREIDERMLSGEIDLAVHSMKDLPSKRPERLRIAAIMKRD 64 Query: 105 DIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN 164 D+ ++ L DL +VIGTSS+RR A L R R D+ V RG ++TRL KL+ Sbjct: 65 SPCDILLTKDGSGLDDLKSGAVIGTSSMRRAAQLRRARPDLVVRSLRGNLQTRLRKLHAG 124 Query: 165 KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224 + I++A AG++R+ K +L+ F PSP QG I + V + L +I+H Sbjct: 125 EYDGIVIAEAGVQRMGYHLGYK-VLDPGFFVPSPNQGTIAV-VSVAGTEGDALASLIDHR 182 Query: 225 DTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 + + ER + + G C +A FA G ++ +L+ DG+ F Sbjct: 183 PSREETMVERRIMEVVGGGCLVPMAVFARHLGDRIHVTAEILSKDGERF 231 >gi|160879927|ref|YP_001558895.1| porphobilinogen deaminase [Clostridium phytofermentans ISDg] gi|160428593|gb|ABX42156.1| porphobilinogen deaminase [Clostridium phytofermentans ISDg] Length = 301 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 92/270 (34%), Positives = 147/270 (54%), Gaps = 12/270 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIG 59 M+K+ +G+R S LA+ +T + ++++ P + ++ L T GD I +++L +IG Sbjct: 1 MKKQKIVVGSRDSKLAV---MQTELIMHEINRNNPEIELELVTLKTTGDLILDQSLDKIG 57 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL- 118 GKGLF +E++ L+ G ID AVHS KDMP + K L I A R D RDV + Sbjct: 58 GKGLFVKELDLALLDGRIDIAVHSLKDMPMEENKELPIVALPKRGDARDVLVLPKGCEFI 117 Query: 119 --KDLAL-HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 +D+ L + IG+SS RRK + + RG + TRL+KL+ + +++LA AG Sbjct: 118 EYEDMNLYYQNIGSSSARRKLQIQKLLPSAGTSGVRGNVITRLDKLDRGEYTSLILAAAG 177 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCER 234 ++R+ I ++E+ P+ GQG + I+ + N E +K N T+ S+ ER Sbjct: 178 LQRVGLPHRISHYFSVEEMIPAAGQGILSIQARRDLNVDFLENIKDAN--TTYASL-AER 234 Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGI 264 +F+ LDG C S IA +A +G L G+ Sbjct: 235 SFVRTLDGGCSSPIAAYAAVEGEELKLVGL 264 >gi|326802537|ref|YP_004320356.1| porphobilinogen deaminase [Sphingobacterium sp. 21] gi|326553301|gb|ADZ81686.1| Porphobilinogen deaminase [Sphingobacterium sp. 21] Length = 546 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 96/273 (35%), Positives = 152/273 (55%), Gaps = 13/273 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LAL A + L + ++ T+GD I + L ++ GKG FT+E Sbjct: 7 IGTRGSDLALWQANHVKDRLATIGVQAELKVI----KTQGDNIQHLRLDKLEGKGFFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI--SHTAQSLKDLAL-- 123 +E++L++ +ID AVHS KD+PT GL+I+A RED ++ I K L++ Sbjct: 63 LEEELLAEKIDIAVHSHKDLPTANPPGLRIAAVSEREDPSELLIILKDCVDLKKRLSVKH 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 ++++GTSS RRKA LL +R D+ + D RG + TRL KL + K AI+LA AG++RLK + Sbjct: 123 NAIVGTSSNRRKAQLLAFRPDLEIEDLRGNVNTRLQKLRDEKYDAIMLAKAGVERLKLDL 182 Query: 183 -KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + EI+ + P+P QG + I+ ++ E+++ ++ +D +++ ER L + Sbjct: 183 SEFHVEIIPPTEIIPAPAQGVLAIQIRESDHTLYEVLQKLHQKDVAETIGVERKVLNLFE 242 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIF 273 G C + YC K +T Y A DG+ F Sbjct: 243 GGCHMPLG--CYCRKTTTGYEVWTAKAKDGESF 273 >gi|126178933|ref|YP_001046898.1| porphobilinogen deaminase [Methanoculleus marisnigri JR1] gi|125861727|gb|ABN56916.1| hydroxymethylbilane synthase [Methanoculleus marisnigri JR1] Length = 294 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/274 (36%), Positives = 136/274 (49%), Gaps = 15/274 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LALA + L D I ++ ++T+GD T L IGG+G+F Sbjct: 3 LRIGTRGSALALAQTNKVVGMLAD-RGIEAE---VVTIATEGDTATGVPLHAIGGQGVFV 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++ ++ GEID AVHS KD+P GL A L R+ D F+ H L S Sbjct: 59 RALDDAILRGEIDAAVHSMKDIPAARPAGLVCCAVLERDSPAD-FLVHECP----LDAVS 113 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIG+SS RR A LLR + V RG ++TRL KL + AI+LA AG++RL + Sbjct: 114 VIGSSSTRRCAQLLRDAPALEVKQLRGNVDTRLRKLREGQYDAIVLAEAGLQRLGL-TLP 172 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L + F PSP QG I + ++P ++H T V ERA + E+ G C Sbjct: 173 GEPLPTDRFVPSPNQGTIAVVCR-DDPAVAGAFAALDHAPTRLDVEIERAVMEEVGGGCF 231 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 + YC+ L VLA DG + + R+ Sbjct: 232 TPQG--IYCRNGNLIAE--VLALDGSRWERIERH 261 >gi|255953953|ref|XP_002567729.1| Pc21g06870 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589440|emb|CAP95584.1| Pc21g06870 [Penicillium chrysogenum Wisconsin 54-1255] Length = 339 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/282 (35%), Positives = 149/282 (52%), Gaps = 16/282 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHK-IPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K IGTR S LAL +T L + K P + I T GD T L + K Sbjct: 8 QKTITIGTRKSKLAL---LQTNLVLDALKKAFPQYEYKIFSKETAGDLNTTIALRDFNTK 64 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 L+TEE+E+ +I G++D VHS KD+PT L ++ +PRED RDV + +SL Sbjct: 65 NLWTEELEELMIDGQVDIIVHSLKDVPTTLPSSCKLGPSMPREDSRDVLVVKQGLPYKSL 124 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 ++ SV+GTSS+RR A L R + V D RG I TRL+KL+ ++ I+LA AG+ Sbjct: 125 SEIPAGSVVGTSSIRRTAQLARKYPHLKVQDVRGNIGTRLSKLDAEDSPYACIILAAAGL 184 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 RL I + L+ ++ + GQGA+ IE + +++ I H+DT SV ER Sbjct: 185 LRLDLADRITQYLDSKNSGMLYAVGQGALGIEIRKEDTVLHDMLDKIGHQDTTFSVLAER 244 Query: 235 AFLAELDGSCKSAIA---GFAY-CKGS-TLYFYGIVLASDGK 271 + L L+G C + + G+ +G+ L +V++ DGK Sbjct: 245 SLLRTLEGGCSAPLGVETGWVQNAQGAKQLRMRSVVVSVDGK 286 >gi|19551663|ref|NP_599665.1| porphobilinogen deaminase [Corynebacterium glutamicum ATCC 13032] gi|62389318|ref|YP_224720.1| porphobilinogen deaminase [Corynebacterium glutamicum ATCC 13032] gi|25453022|sp|Q8NT90|HEM3_CORGL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|21323183|dbj|BAB97811.1| Porphobilinogen deaminase [Corynebacterium glutamicum ATCC 13032] gi|41324652|emb|CAF19134.1| PORPHOBILINOGEN DEAMINASE [Corynebacterium glutamicum ATCC 13032] Length = 302 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 12/295 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LA A R L + +IV P GD N + E G G+FT Sbjct: 3 LKIGTRGSKLATTQAGTIRDQLKHYGRDAELHIVTTP----GD--VNMSPVERIGVGVFT 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124 + + L SGE D AVHS KD+PT + +P R D R+ I+ +L +L Sbjct: 57 QALRDVLHSGECDVAVHSMKDLPTATDPRFHL--VVPTRADSREALIARDGLTLAELPEG 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTS+ RR + L R D+ ++ RG I+TR+ K+ + + A++LAYAG+ R+ + Sbjct: 115 AKVGTSAPRRISQLKAIRPDLEILPLRGNIDTRMGKVTSGELDAVMLAYAGLTRVGMQDR 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E+ + + P+P QGA+ IE ++ + + ++ H DT+ S ER L L+ C Sbjct: 175 ATEVFDADIIMPAPAQGALAIECRADDTETVRALNMLMHADTFVSAVAERTVLNRLEAGC 234 Query: 245 KSAIAGFAYC---KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + +A A G T+ V A DG S G+ +G AQ + Sbjct: 235 TAPVAAHATLDGYSGDTMTLTAGVYALDGSDQLVFSAEGDGARPEELGELVAQQL 289 >gi|32490989|ref|NP_871243.1| hypothetical protein WGLp240 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166195|dbj|BAC24386.1| hemC [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 291 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 81/242 (33%), Positives = 133/242 (54%), Gaps = 1/242 (0%) Query: 30 VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPT 89 +H P NI ++P+ T GD I KGLF +E+EK L+ + D AVHS KD + Sbjct: 11 LHYHPKLNIKLVPILTTGDLINKIRNNITNEKGLFIKELEKSLLKYQSDIAVHSMKDFSS 70 Query: 90 KLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVID 149 L L ++A R+D RD +S+ ++ L ++ +GTSSLRRK LL R D+ + Sbjct: 71 SFLDSLGLAAICKRDDPRDAIVSNYYNNIISLPNNAKVGTSSLRRKCQLLSIRPDLKIFP 130 Query: 150 FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209 +G I +RL KLN A++LA A +KRLK + + ++ P+ GQG+I I+ + Sbjct: 131 CKGNIHSRLKKLNQGVFDALILATAALKRLKINEQMYTPIDPSYLLPAMGQGSIAIQCRL 190 Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG-STLYFYGIVLAS 268 + K ++V+ IN++ T +N E+ ++ L C+ I +A + +T++ +V + Sbjct: 191 YDNKIIDIVRNINNKKTALCINSEKIVVSMLGTGCRVPIGSYAKIENKNTIWIRALVGSI 250 Query: 269 DG 270 DG Sbjct: 251 DG 252 >gi|467039|gb|AAA17223.1| hem3b [Mycobacterium leprae] Length = 315 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 87/276 (31%), Positives = 142/276 (51%), Gaps = 16/276 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLM-DVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA A R +L+ + H P +VI+ +T GD+ ++ ++ +G G+F Sbjct: 2 IRIGTRGSLLATTQAALVRDALIANGH---PAELVIV--NTAGDQ-SSASIDSLG-VGVF 54 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T + + G +D AVHS KD+PT ++A PR D RD ++ L +L Sbjct: 55 TTALRAAIEEGCVDAAVHSYKDLPTADDPRFTVAAIPPRNDPRDAVVTRDELVLAELPAG 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ R + Sbjct: 115 SLVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARPGRLDE 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E L+ P+P QGAI +E + + ++ ++ DT +V ER LAEL+ C Sbjct: 175 VTETLDPVQMVPAPAQGAIAVECRAGDSRLVAVLAALDDADTRAAVTAERVLLAELEAGC 234 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 + + A S + +G++F E+S G Sbjct: 235 SAPVGAIAQVVES--------IDGEGRVFEELSLRG 262 >gi|255324252|ref|ZP_05365374.1| hydroxymethylbilane synthase [Corynebacterium tuberculostearicum SK141] gi|311740973|ref|ZP_07714798.1| hydroxymethylbilane synthase [Corynebacterium pseudogenitalium ATCC 33035] gi|255298768|gb|EET78063.1| hydroxymethylbilane synthase [Corynebacterium tuberculostearicum SK141] gi|311303775|gb|EFQ79853.1| hydroxymethylbilane synthase [Corynebacterium pseudogenitalium ATCC 33035] Length = 295 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 94/285 (32%), Positives = 143/285 (50%), Gaps = 10/285 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F+IGTR S LA A R L+D +IV +T GD N E G G+FT Sbjct: 2 FQIGTRGSKLATTQAGHVRDWLIDAGFDSQLHIV----TTAGD--VNMAPVERIGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124 + + + L +GE D AVHS KD+PT + ++ +P R+D R+ ++ SL L Sbjct: 56 QALREALYAGECDIAVHSFKDLPTAPDERFRL--VVPQRQDSREALVARDGLSLAQLPQG 113 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTS+ RR + L R D+ + RG I+TR++K+ + + A+LLAYAG+ R Sbjct: 114 ARVGTSAPRRISQLAALRPDLEIRPLRGNIDTRMSKVTDGELDAVLLAYAGLLRGGYADR 173 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 EI F P+P QGA+ IE A L +++ + + ERA LA L+ C Sbjct: 174 ATEIFEPSVFMPAPAQGALAIEAVAGTEAAAALDAIVDDRASAAAAG-ERAVLARLEAGC 232 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 + +A + G L G V A DG + +G+ +A ++G Sbjct: 233 TAPVAATSRWDGDQLTVRGGVFALDGSRQLTATASGSAAEAADLG 277 >gi|260588741|ref|ZP_05854654.1| hydroxymethylbilane synthase [Blautia hansenii DSM 20583] gi|260540923|gb|EEX21492.1| hydroxymethylbilane synthase [Blautia hansenii DSM 20583] Length = 296 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 86/257 (33%), Positives = 136/257 (52%), Gaps = 6/257 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LA+ + R + + + + I+ + T GD+I +RTL +IGGKGLF +E Sbjct: 6 IGSRESKLAVVQSEMVRDYIRENN--ADIQVEILTMKTTGDKILDRTLDKIGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 ++K L+ + + +VHS KDMP ++ + L + A+ RED RDV + + + L I Sbjct: 64 LDKALMERKTELSVHSLKDMPMEVPEELPLIAFSKREDPRDVLV--LPKGVTQLDTSKPI 121 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 G SSLRR L D+ RG ++TRL KL++ + +LLA AG+KRL E I Sbjct: 122 GCSSLRRILQLKEIFPDMECKSVRGNVQTRLKKLDDGEYSGLLLAAAGLKRLGLEDRIAR 181 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 E+ P+ GQG + I+ + + +K E+ + ERAF+ L+G C S Sbjct: 182 YFEPEEMIPAAGQGILAIQGRKDVDYS--YLKGYGDENATYAALAERAFVRYLNGGCSSP 239 Query: 248 IAGFAYCKGSTLYFYGI 264 +A A + + G+ Sbjct: 240 VAAHARVEDGQIILRGL 256 >gi|289193013|ref|YP_003458954.1| porphobilinogen deaminase [Methanocaldococcus sp. FS406-22] gi|288939463|gb|ADC70218.1| porphobilinogen deaminase [Methanocaldococcus sp. FS406-22] Length = 292 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 90/252 (35%), Positives = 135/252 (53%), Gaps = 21/252 (8%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LAL A + + ++ K +++ I + T GDR+ ++ L++IG G+FT+E Sbjct: 4 IGTRGSKLALYQA----NKVAELLKNLGYDVKIKIIKTTGDRVLDKKLSDIG-IGVFTKE 58 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 ++ +++ EID AVHS KD+PT + L + A L R+ D+ I + D VI Sbjct: 59 LDLAMLNNEIDIAVHSLKDIPTIWNENLMVGAVLERDSYYDLLIWNKDVDF-DENSKIVI 117 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A L + RG ++TRL KL N AI+L+ AGI RL Sbjct: 118 GTSSLRRRAFLKFLYPNAKFELLRGNVDTRLRKLKENLYDAIVLSEAGIIRLG------- 170 Query: 188 ILNIEDFP-------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +N++DF P+P QG I + ++ + ++++K INHE T+ CERA L E Sbjct: 171 -INLDDFNYKRLNILPAPAQGIIAVACKRDDEEMKDILKEINHEKTYLESLCERAALNEF 229 Query: 241 DGSCKSAIAGFA 252 G C A Sbjct: 230 GGGCSVPFGALA 241 >gi|331084091|ref|ZP_08333198.1| porphobilinogen deaminase [Lachnospiraceae bacterium 6_1_63FAA] gi|330402453|gb|EGG82023.1| porphobilinogen deaminase [Lachnospiraceae bacterium 6_1_63FAA] Length = 296 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 86/257 (33%), Positives = 136/257 (52%), Gaps = 6/257 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LA+ + R + + + + I+ + T GD+I +RTL +IGGKGLF +E Sbjct: 6 IGSRESKLAVVQSEMVRDYIRENN--ADIQVEILTMKTTGDKILDRTLDKIGGKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 ++K L+ + + +VHS KDMP ++ + L + A+ RED RDV + + + L I Sbjct: 64 LDKALMERKTELSVHSLKDMPMEVPEELPLIAFSKREDPRDVLV--LPKGVTQLDTSKPI 121 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 G SSLRR L D+ RG ++TRL KL++ + +LLA AG+KRL E I Sbjct: 122 GCSSLRRILQLKEIFPDMECKSVRGNVQTRLKKLDDGEYSGLLLAAAGLKRLGLEDRIAR 181 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 E+ P+ GQG + I+ + + +K E+ + ERAF+ L+G C S Sbjct: 182 YFEPEEMIPAAGQGILAIQGRKDVDYS--YLKGYGDENATYAALAERAFVRYLNGGCSSP 239 Query: 248 IAGFAYCKGSTLYFYGI 264 +A A + + G+ Sbjct: 240 VAAHARVEDGQIILRGL 256 >gi|328883227|emb|CCA56466.1| Porphobilinogen deaminase [Streptomyces venezuelae ATCC 10712] Length = 328 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 92/319 (28%), Positives = 158/319 (49%), Gaps = 28/319 (8%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIG 59 M ++ R+GTR S LA+A + + V ++ + ++ ++T GD T+R L +IG Sbjct: 1 MTERALRLGTRRSKLAMAQSGHVADA---VRRLTGRPVELVEITTYGD--TSREHLAQIG 55 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G G+F + L++ E+D AVHS KD+PT L ++A RED RDV I+ +L Sbjct: 56 GTGVFVAALRDALLADEVDFAVHSLKDLPTAQHPDLVLAAIPEREDPRDVLIARDGLTLD 115 Query: 120 DLALHSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 L + +GT S RR A L + DI+ + RG ++TR+ + + A++LA AG Sbjct: 116 RLPEGARVGTGSPRRMAQLHAYARNHGLDITCVPIRGNVDTRVGYVRKGELDAVVLAAAG 175 Query: 176 IKRLKKEKVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 + R+ + L+ E P P+PGQGA+ +E +N + + ++ T +V Sbjct: 176 LNRIGGTDELLGGLSAEPLPVDTVLPAPGQGALAVECLASNTELVAALAPLDDPLTRAAV 235 Query: 231 NCERAFLAELDGSCKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNG- 280 ER+ LA L+ C + + A + + G+V +DG ++S G Sbjct: 236 TAERSLLAALEAGCSAPVGALADLLADDPGHGQVVTEMRLRGVVGTTDGSTLVQLSTTGP 295 Query: 281 ---NRCDAINIGRDAAQYI 296 + +A+ +GR+ A + Sbjct: 296 VPTSHDEAMALGRELADEM 314 >gi|114640812|ref|XP_001149046.1| PREDICTED: porphobilinogen deaminase [Pan troglodytes] Length = 276 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 90/241 (37%), Positives = 129/241 (53%), Gaps = 6/241 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L + P II +ST GD+I + L++IG K LFT Sbjct: 21 IRVGTRKSQLARIQTDSVVTTLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 79 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 138 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181 SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 198 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L Sbjct: 199 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLV 258 Query: 242 G 242 G Sbjct: 259 G 259 >gi|86739201|ref|YP_479601.1| porphobilinogen deaminase [Frankia sp. CcI3] gi|86566063|gb|ABD09872.1| hydroxymethylbilane synthase [Frankia sp. CcI3] Length = 395 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 80/252 (31%), Positives = 123/252 (48%), Gaps = 40/252 (15%) Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99 ++P+ T GDR + +++IGG G+F + L+SGEID AVHS KD+PT GL ++A Sbjct: 73 LVPIVTAGDRSSGE-ISQIGGTGVFVSALRDALLSGEIDLAVHSLKDLPTATPPGLVLAA 131 Query: 100 YLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159 PR D RDV ++ + + L +L + I T S RR A L + V+ RG ++TRL Sbjct: 132 VPPRADPRDVLVAPSGRRLAELRAGARIATGSPRRAAQLRALGLGLEVVTIRGNVDTRLK 191 Query: 160 KLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE------------- 206 K + + A++LA+AG+ RL + + EIL P+PGQGA+ IE Sbjct: 192 KAIDGEVDAVVLAHAGLARLDRLDAVTEILEPTVMLPAPGQGALAIECTGGAGLVVAGPA 251 Query: 207 --------------------------THVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V+ A+ L V++ + +V ERAFLA + Sbjct: 252 RALVPAGPGSGPAVGQTGGETWSDGGQPVDTGLAELLRFVLDDASSSVAVRAERAFLAGI 311 Query: 241 DGSCKSAIAGFA 252 + C + + A Sbjct: 312 EAGCTAPVGALA 323 >gi|317012081|gb|ADU82689.1| porphobilinogen deaminase [Helicobacter pylori Lithuania75] Length = 306 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 98/282 (34%), Positives = 147/282 (52%), Gaps = 5/282 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANHIKERLKKECLIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + + Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + + Sbjct: 123 GTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++E+ PS GQGA+ +E N+ L K +N + ER F+ L+G C+ Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFATLQK-LNDAKSAFCCRLEREFIKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 I A G + ++ +GK + G++ A ++ Sbjct: 242 PIGVHASLVGDRVKIQAVLGLPNGKEVITKEKQGDKTKAFDL 283 >gi|294815172|ref|ZP_06773815.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064] gi|294327771|gb|EFG09414.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064] Length = 333 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 90/276 (32%), Positives = 135/276 (48%), Gaps = 19/276 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIP----PHNIVIIPLSTKGDRITNRTLTEIG-- 59 + +G+R S LA A E L + + P H +++ GDR TL+ + Sbjct: 8 YFVGSRASNLAKAQVREYLRPLRE--RFPEITFTHRVIL----EGGDRDRTSTLSAVSAV 61 Query: 60 -GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G F+ E L G++D VHS KD+PT GL + RED+RD T L Sbjct: 62 NGGSAFSSAQEAALSRGDVDVVVHSLKDLPTANPAGLVLLPPPGREDVRDALCGSTLAGL 121 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 + A +GT + RR A LL R D+ V+ RG + RL K+ A++LA AG++R Sbjct: 122 RKGAR---VGTGAPRRVAQLLAVRPDLVVVPIRGNVPPRLKKIETMGLDAVVLAVAGLRR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKA--QELVKVINHEDTWDSVNCERAF 236 L + I ++L ++ FPPSPGQGA+ I+ ++ A ++L+ + +V ERA Sbjct: 179 LGLDDAIGDVLPLDLFPPSPGQGALGIQVRTDDHSAPLRDLLSTVGDASADAAVRAERAL 238 Query: 237 LAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGK 271 LAEL G C + +A L G V + DG+ Sbjct: 239 LAELHGGCSVPVGAYAEPLPNGELSLAGQVTSLDGR 274 >gi|254387445|ref|ZP_05002684.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064] gi|326443531|ref|ZP_08218265.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064] gi|197701171|gb|EDY46983.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064] Length = 329 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 90/276 (32%), Positives = 135/276 (48%), Gaps = 19/276 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIP----PHNIVIIPLSTKGDRITNRTLTEIG-- 59 + +G+R S LA A E L + + P H +++ GDR TL+ + Sbjct: 4 YFVGSRASNLAKAQVREYLRPLRE--RFPEITFTHRVIL----EGGDRDRTSTLSAVSAV 57 Query: 60 -GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G F+ E L G++D VHS KD+PT GL + RED+RD T L Sbjct: 58 NGGSAFSSAQEAALSRGDVDVVVHSLKDLPTANPAGLVLLPPPGREDVRDALCGSTLAGL 117 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 + A +GT + RR A LL R D+ V+ RG + RL K+ A++LA AG++R Sbjct: 118 RKGAR---VGTGAPRRVAQLLAVRPDLVVVPIRGNVPPRLKKIETMGLDAVVLAVAGLRR 174 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKA--QELVKVINHEDTWDSVNCERAF 236 L + I ++L ++ FPPSPGQGA+ I+ ++ A ++L+ + +V ERA Sbjct: 175 LGLDDAIGDVLPLDLFPPSPGQGALGIQVRTDDHSAPLRDLLSTVGDASADAAVRAERAL 234 Query: 237 LAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGK 271 LAEL G C + +A L G V + DG+ Sbjct: 235 LAELHGGCSVPVGAYAEPLPNGELSLAGQVTSLDGR 270 >gi|111075012|gb|ABH04865.1| porphobilinogen deaminase [Heliobacillus mobilis] Length = 187 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 75/177 (42%), Positives = 106/177 (59%), Gaps = 3/177 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++P IGTR S LAL + L ++ P + + TKGD+I + L +IG KG Sbjct: 5 QRPVVIGTRDSALALWQTNWVMARLKEL--FPEQAFEVKAIKTKGDKILDVALAKIGDKG 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E ++ GEID AVHS KD+PT L +GL I A RED RD+ IS L L Sbjct: 63 LFTKELEVSMLEGEIDMAVHSLKDLPTVLPEGLTIGAMCVREDCRDILISRHG-GLDALP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 + +GT+SLRRKA + + R D+ ++D RG ++TRL K+ ++LA AG+ RL Sbjct: 122 QGARVGTASLRRKAQIWQVRPDLELLDIRGNLQTRLRKMEEQNLDGLILAAAGVIRL 178 >gi|315650219|ref|ZP_07903294.1| hydroxymethylbilane synthase [Eubacterium saburreum DSM 3986] gi|315487576|gb|EFU77884.1| hydroxymethylbilane synthase [Eubacterium saburreum DSM 3986] Length = 309 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 98/314 (31%), Positives = 154/314 (49%), Gaps = 37/314 (11%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ RIGTR S LALA ++ + P I +P++T GD+ + +L EIGGKG Sbjct: 4 KEIIRIGTRKSALALAQTKLVGDAVK--NSFPHIKIEYVPMNTIGDKRLDISLQEIGGKG 61 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH----TAQSL 118 LFT+E+E+ LI G+ID A+HSAKD+P + L++ L R +RDV + + Sbjct: 62 LFTKELEEALIKGDIDLAIHSAKDLPLEFDNRLKLMPVLKRGAVRDVLVVKNDCPVDLQI 121 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 KDL IGTSS RR + +I ++ RG + TR+ K+ + ++LA AG+ R Sbjct: 122 KDLPRGFRIGTSSKRRSEQAMLLNHNIKIVPIRGNVLTRIGKIFSGDTDGVILARAGLDR 181 Query: 179 L--------KKEKVIKEILNIEDFP-----PSPGQGAICIETHVNNPKAQELVKVINHED 225 L + +K+++++ NI D P+P QG +C + E++K I ED Sbjct: 182 LLADTNCAGECDKILQKV-NITDIKETDILPAPAQGILC--GQYASDYISEVLKKIQDED 238 Query: 226 TWDSVNCERAFLAELDGSCKSAIAGF-----------AYCKGSTLYFYGIVLASDGKIFH 274 N ER +L+ L+ C ++ + AY +G Y I + +F Sbjct: 239 CNILFNAERKYLSVLEADCHTSAGIYIKKDRDNYSIKAYFEGK----YQIAYSDSKGLFD 294 Query: 275 EVSRNGNRCDAINI 288 V N+ N+ Sbjct: 295 MVENTANKLKRKNV 308 >gi|292654255|ref|YP_003534152.1| porphobilinogen deaminase [Haloferax volcanii DS2] gi|291372938|gb|ADE05165.1| porphobilinogen deaminase [Haloferax volcanii DS2] Length = 363 Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 98/329 (29%), Positives = 149/329 (45%), Gaps = 60/329 (18%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+ TR S LA A A + +L ++ ++ + T GDRI + + +G G F Sbjct: 5 LRLATRGSALARAQAASVQGALAGRRL----DVELVEVETTGDRIQDELIHRLGKTGAFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++++++ GE+D AVHS KDMPT+ L ++ R DV ++ + DL + Sbjct: 61 RALDERVLDGEVDAAVHSMKDMPTEKPADLVVAGVPERAPAGDVLVTAEGHDIDDLPEGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-------------NNNKAH----- 167 V+GTSSLRR+A LL +R D+ V RG ++TR+ KL N+K Sbjct: 121 VVGTSSLRRQAQLLNYRDDLEVEPLRGNVDTRIEKLLATHLQREHEARVENDKERQGKKG 180 Query: 168 ------------------------------------AILLAYAGIKRLK-KEKVIKEILN 190 AI+LA AG+KR EKV E L Sbjct: 181 KTDHDEAFDETADEWFEGLTELERQALGRQVETEYDAIVLAEAGLKRSGLTEKVNYERLP 240 Query: 191 IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250 F P+PGQGAI + T ++ + + ++H T ER LAEL G C + + Sbjct: 241 RTTFVPAPGQGAIAV-TAADSVVIELIRDKLDHPRTRVETTVERTILAELGGGCIAPVGV 299 Query: 251 FAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 A +G ++ VLA+DG + SR+ Sbjct: 300 HALLQGEHVHVDVQVLATDGSESIKTSRD 328 >gi|108562665|ref|YP_626981.1| porphobilinogen deaminase [Helicobacter pylori HPAG1] gi|123073837|sp|Q1CUR5|HEM3_HELPH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|107836438|gb|ABF84307.1| porphobilinogen deaminase [Helicobacter pylori HPAG1] Length = 306 Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 98/282 (34%), Positives = 148/282 (52%), Gaps = 5/282 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L I I + TKGD+I + L +IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANHIKERLKKECLIESE---IQIVKTKGDKILDTPLNKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + + Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL+ + + Sbjct: 123 GTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++++ PS GQGA+ +E N+ L K +N E + ER F+ L+G C+ Sbjct: 183 KAFSVKEMIPSMGQGALGVEMLKNHKHFITLQK-LNDEKSAFCCRLEREFIKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 I A G + ++ +GK + G++ A ++ Sbjct: 242 PIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDL 283 >gi|227549755|ref|ZP_03979804.1| porphobilinogen deaminase [Corynebacterium lipophiloflavum DSM 44291] gi|227078141|gb|EEI16104.1| porphobilinogen deaminase [Corynebacterium lipophiloflavum DSM 44291] Length = 301 Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 89/292 (30%), Positives = 146/292 (50%), Gaps = 11/292 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IGTR S LA A R ++ H+ + ++T GD ++ E G G+FT Sbjct: 2 LHIGTRGSHLATTQAGHVRDDIIAAG----HDAELTIVTTPGD--LSQAPVERIGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124 + L GE++ AVHS KD+PT I +P RED R+ I+ L DL Sbjct: 56 SALRDALFRGEVEIAVHSFKDLPTADEPRAHI--VVPAREDNREALIARDGMQLADLPQG 113 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTS+ RR + L R D+ + RG IE+R+ ++ + + AI+LAYAG+ R Sbjct: 114 ARVGTSAPRRISQLKALRPDLDIRPLRGNIESRMGRVTSGELDAIVLAYAGLLRAGYGDR 173 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ + +F P+P QGA+ +E ++ + + ++ + T V+ ER LA L+ C Sbjct: 174 ATQLFDASEFLPAPAQGALAVECRSDDAETRAVLDPLMDAATALQVSAERHVLATLEAGC 233 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + +A A+ G L V A DG H++ +G+ A + R+AA+ + Sbjct: 234 TAPVAAHAFYDGGELSLRAGVFALDGS--HQLVESGSVTVADTLDREAARGL 283 >gi|25026992|ref|NP_737046.1| porphobilinogen deaminase [Corynebacterium efficiens YS-314] gi|259508525|ref|ZP_05751425.1| hydroxymethylbilane synthase [Corynebacterium efficiens YS-314] gi|39931582|sp|Q8FSF7|HEM3_COREF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|23492272|dbj|BAC17246.1| putative hydroxymethylbilane synthase [Corynebacterium efficiens YS-314] gi|259163875|gb|EEW48429.1| hydroxymethylbilane synthase [Corynebacterium efficiens YS-314] Length = 299 Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 86/269 (31%), Positives = 134/269 (49%), Gaps = 12/269 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R L + IV P GD N + E G G+FT Sbjct: 3 LRIGTRGSKLATTQAGHMRDRLKHFGRDAELTIVTTP----GD--VNMSPVERIGVGVFT 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124 + + L++ EID AVHS KD+PT + +P R D RD I+ +L++L Sbjct: 57 QALRDALVADEIDVAVHSFKDLPTA--PDPRFHLVVPTRADARDALIARDGLTLEELPEG 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTS+ RR + L R D+ ++ RG I+TR+ K+ + + A++LA+AG+ R+ + Sbjct: 115 AKVGTSAPRRISQLKALRPDLEILPLRGNIDTRMGKVTSGELDAVVLAFAGLSRVGMQDR 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ + + P+P QGA+ IE V + + ++ H DT+ + ER L L+ C Sbjct: 175 ATQVFDPDMLMPAPAQGALAIECRVEDEDIITGLNMLMHADTYVTAVAERTVLNRLEAGC 234 Query: 245 KSAIAGFAYC---KGSTLYFYGIVLASDG 270 + +A A G T+ V A DG Sbjct: 235 TAPVAAHATLDGYAGDTMTLTAGVFALDG 263 >gi|255513653|gb|EET89918.1| porphobilinogen deaminase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 301 Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 91/253 (35%), Positives = 131/253 (51%), Gaps = 7/253 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVII-PLSTKGDRITNRTLTEIG 59 M + IGTR S LA+A A R+ L + IV I L+ K DR RT +I Sbjct: 1 MSESEITIGTRGSELAVAQAEIVRNKLAAIEPRISFRIVKIKTLNEKVDRSKARTEKDI- 59 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 +T+EI++ ++ ID AVHS KD+ + + +QI A R+D RDVFI +T + Sbjct: 60 ----YTKEIDEAILERRIDIAVHSLKDLKFNMDENMQIGAVPDRDDPRDVFIGNTETEFE 115 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +++GTSS+RR+ L R + D G I+TRL+KLN+ + I++A AG+KRL Sbjct: 116 HLGTDALVGTSSIRRRVQLTRINPKPMISDLHGNIDTRLSKLNSGEFSGIVIAAAGVKRL 175 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 K V + + D P+ GQGAI + H +N A EL+K I++ V E F Sbjct: 176 GK-AVRMQYFDERDVVPAIGQGAIAVTVHKDNSAAAELLKRIDNMKARVEVGEEIEFGKA 234 Query: 240 LDGSCKSAIAGFA 252 C I A Sbjct: 235 FGTGCNLPIGANA 247 >gi|317013683|gb|ADU81119.1| porphobilinogen deaminase [Helicobacter pylori Gambia94/24] Length = 306 Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 97/282 (34%), Positives = 148/282 (52%), Gaps = 5/282 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A + L + I + T GD+I + L +IGGKGLFT+E Sbjct: 6 IGSRGSELALWQANHIKERLKKECSMESE---IQIVKTTGDKILDAPLNKIGGKGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + + Sbjct: 63 LEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKV 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IK 186 GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL + + Sbjct: 123 GTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGAKYR 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + ++E+ PS GQGA+ +E N+ L K +N E++ + ER F+ L+G C+ Sbjct: 183 KAFSVEEMIPSMGQGALGVEMLKNHKHFITLQK-LNDEESAFCCHLEREFIKGLNGGCQI 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 I A G + ++ +GK + G++ A ++ Sbjct: 242 PIGVHASLMGDEVKIRAVLGLPNGKEVITKEKQGDKTKAFDL 283 >gi|297159419|gb|ADI09131.1| porphobilinogen deaminase [Streptomyces bingchenggensis BCW-1] Length = 345 Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 96/301 (31%), Positives = 155/301 (51%), Gaps = 15/301 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + + ++ V P + ++ ++T+GD ++ L +IGG G+F Sbjct: 29 PLRLGTRRSALAMAQSGQIADAVRRVTGRP---VELVEITTRGD-VSREDLAQIGGTGVF 84 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L+ GEID AVHS KD+PT L ++A RED RD I+ + +L Sbjct: 85 ATALREALLRGEIDFAVHSLKDLPTAQPDDLVLAALPAREDPRDALIARDGLTFAELPPG 144 Query: 125 SVIGTSSLRRKALLLRW-RS---DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + IGT S RR + L W RS I + RG ++TR+ + + + A++LA AG+ RL Sbjct: 145 ARIGTGSPRRTSQLRAWARSLGLRIETVPIRGNVDTRIGYVRSGELDAVVLAAAGLARLG 204 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + EIL+ + P+PGQGA+ +E N + ++ T +V ER+ LA L Sbjct: 205 RLDEATEILDADHILPAPGQGALAVECAAANAALAAQLAELDDPLTRVAVTAERSLLAAL 264 Query: 241 DGSCKSAIAGFAYCKG-----STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 + C + + A G + + G+V +DG ++S G A G +AAQ Sbjct: 265 EAGCSAPVGALADLLGDGQAVTEMRLRGVVGTTDGSSLVQLSITGPVPTA--PGEEAAQL 322 Query: 296 I 296 + Sbjct: 323 M 323 >gi|116199079|ref|XP_001225351.1| hypothetical protein CHGG_07695 [Chaetomium globosum CBS 148.51] gi|88178974|gb|EAQ86442.1| hypothetical protein CHGG_07695 [Chaetomium globosum CBS 148.51] Length = 343 Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 95/256 (37%), Positives = 133/256 (51%), Gaps = 16/256 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64 ++GTR S LAL ++L H PH + ++T GDR + L E+G KGL+ Sbjct: 8 IKMGTRRSALALRQTELVIAALQSAH---PHVTFEVHAMATAGDRDKSTPLPEMG-KGLW 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS------- 117 T E+E KL++ ++D VHS KDMPT L +G + RED RDV I A+ Sbjct: 64 TSELEAKLVARDVDVIVHSLKDMPTTLPEGCVLRCVPAREDPRDVVIFSKAREEAGRYKK 123 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 LKDL +V+GTSS+RR A L R + D RG IETRL K + AI+LA AG+ Sbjct: 124 LKDLPEGAVVGTSSVRRAAQLKRRYPGLVFRDVRGNIETRLRKCDEEGFDAIILAAAGLL 183 Query: 178 RLKKEKVIKEIL--NIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 RL I + L N E + GQG + +E ++ + +EL+K I T + E Sbjct: 184 RLDLGARIAQYLDSNTEGGGLLHAVGQGGLGLEVREDDEQMKELLKAIEDTPTMTACFAE 243 Query: 234 RAFLAELDGSCKSAIA 249 R+ + L+G C I Sbjct: 244 RSVMRTLEGGCSVPIG 259 >gi|111220451|ref|YP_711245.1| porphobilinogen deaminase 1 [Frankia alni ACN14a] gi|111147983|emb|CAJ59649.1| Porphobilinogen deaminase 1 (PBG 1) (Hydroxymethylbilane synthase 1) (HMBS 1) (Pre-uroporphyrinogen synthase 1) [Frankia alni ACN14a] Length = 402 Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 66/167 (39%), Positives = 100/167 (59%), Gaps = 1/167 (0%) Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99 ++P+ T GDR + +++IGG G+F + L++GEID AVHS KD+PT GL ++A Sbjct: 60 LVPIVTAGDR-SPAEISQIGGTGVFVSALRDALLAGEIDLAVHSLKDLPTATPPGLVLAA 118 Query: 100 YLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159 RED RDV +S + + L L + + T + RR A L V+ RG ++TRL Sbjct: 119 VPTREDTRDVLVSPSGRGLAALGPGARVATGAPRRAAQLRALGLGFDVVAIRGNVDTRLK 178 Query: 160 KLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206 K + + A++LAYAG+ RL + + EIL+ E P+PGQGA+ +E Sbjct: 179 KAIDGEVDAVVLAYAGLARLDRLDAVTEILDPEVMLPAPGQGALAVE 225 >gi|327329283|gb|EGE71043.1| hydroxymethylbilane synthase [Propionibacterium acnes HL103PA1] Length = 315 Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 76/232 (32%), Positives = 117/232 (50%), Gaps = 14/232 (6%) Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96 ++ + ++T GD I+ +L +GG G+F I L+ GE D AVHS KD+PT GL Sbjct: 12 DVDLTTITTHGD-ISTASLAAMGGIGVFASAIRATLLKGEADIAVHSFKDLPTGRPLGLA 70 Query: 97 ISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIET 156 I A R D RD ++ +L DL + +GT S RR A LL R D++++D RG ++T Sbjct: 71 IGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAVRPDLTIVDIRGNVDT 130 Query: 157 RLNKL----------NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206 RL ++ A++LA +G+ RL + E L+ P+P QGA+ +E Sbjct: 131 RLGRVKGLGHYAKGGGKEDLDAVVLAASGLARLGHSGTVTEFLDPSVVLPAPAQGALAVE 190 Query: 207 THVNNPKAQELVKVINHED---TWDSVNCERAFLAELDGSCKSAIAGFAYCK 255 + + +L K + D T + ERA L+ L+ C + I A K Sbjct: 191 CRTADSRHGKLAKALARIDDRRTRLAATAERAVLSHLEAGCAAPIGALAQLK 242 >gi|145294537|ref|YP_001137358.1| porphobilinogen deaminase [Corynebacterium glutamicum R] gi|158513580|sp|A4QB59|HEM3_CORGB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|23507698|gb|AAN38291.1| porphobilinogen deaminase [Corynebacterium glutamicum] gi|140844457|dbj|BAF53456.1| hypothetical protein [Corynebacterium glutamicum R] Length = 302 Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 91/295 (30%), Positives = 142/295 (48%), Gaps = 12/295 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LA A R L + +IV P GD N + E G G+FT Sbjct: 3 LKIGTRGSKLATTQAGTIRDQLKYFGRDAELHIVTTP----GD--VNMSPVERIGVGVFT 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124 + + L +GE D AVHS KD+PT + +P R D R+ I+ +L +L Sbjct: 57 QALRDVLHAGECDVAVHSMKDLPTAADPRFHL--VVPTRADSREALIARDGLTLAELPEG 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTS+ RR + L R D+ ++ RG I+TR+ K+ + + A++LAYAG+ R+ + Sbjct: 115 AKVGTSAPRRISQLKAIRPDLEILPLRGNIDTRMGKVTSGELDAVMLAYAGLTRVGMQDR 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E+ + + P+P QGA+ IE ++ + + ++ H DT+ S ER L L+ C Sbjct: 175 ATEVFDADIIMPAPAQGALAIECRADDTETVRALNMLMHADTFVSAVAERTVLNRLEAGC 234 Query: 245 KSAIAGFAYC---KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + +A A G T+ V A DG S G+ +G AQ + Sbjct: 235 TAPVAAHATLDGYSGDTMTLTAGVYALDGSDQLVFSAEGDGARPEELGELVAQQL 289 >gi|296823866|ref|XP_002850512.1| porphobilinogen deaminase [Arthroderma otae CBS 113480] gi|238838066|gb|EEQ27728.1| porphobilinogen deaminase [Arthroderma otae CBS 113480] Length = 334 Score = 132 bits (331), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 96/280 (34%), Positives = 146/280 (52%), Gaps = 16/280 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P RIGTR S LA+ A + L + P H I L T GD+ N +L G K L Sbjct: 9 RPLRIGTRRSNLAIIQAKAIQDQLQKLA--PEHTFEIEALHTIGDKDQNSSLYNFGAKNL 66 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKD 120 +T E+E+ L SG++D VH KDMPTKL ++A R+D RD I SL+ Sbjct: 67 WTTELEELLTSGKLDVVVHCLKDMPTKLPDSCDLAAIPLRDDPRDALIVKVGLPYTSLQS 126 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKR 178 L +V+GTSS+RR A L R ++ I+ RG +ETRL KL++ ++ I+++ G++R Sbjct: 127 LPEGAVVGTSSVRRSAQLCRLFPNLRFINIRGNVETRLAKLDDPQSEYTCIIMSACGLER 186 Query: 179 LKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELV-KVINHEDTWDSVNCERA 235 + I + + +D + GQGAI +E + K L+ ++++H+ + + ERA Sbjct: 187 VGLGYRINQRIGSKDGGILHAVGQGAIGLEVRKGDTKILHLLDQLVDHKSSLACL-AERA 245 Query: 236 FLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDG 270 + L+G C I G TL GIV++ DG Sbjct: 246 LMRTLEGGCSVPIGVETEWIGDSEVYLTLRIRGIVISLDG 285 >gi|327539486|gb|EGF26101.1| porphobilinogen deaminase [Rhodopirellula baltica WH47] Length = 315 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 83/247 (33%), Positives = 128/247 (51%), Gaps = 16/247 (6%) Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99 I+PL +KGD R + GLFT+ I++ L+ E D AVHS KD+PT+ ++A Sbjct: 20 IVPLVSKGD-TDMRPIDGTRQVGLFTKRIQQALVDDEADVAVHSLKDLPTEPDSRFVLAA 78 Query: 100 YLPREDIRDVFI-----------SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVI 148 PRE + D + + L L + +GT S RR A L + R D+ V+ Sbjct: 79 VPPRESVLDALVFADNSPHLEPQTGAESPLDYLPQGARVGTGSTRRLAQLKQLRPDLEVL 138 Query: 149 DFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH 208 RG ++TRL KLN + AI+LA+AGI RL+ + + +++ P+PGQGA+ IE Sbjct: 139 PIRGNVQTRLAKLNAGEFDAIVLAHAGILRLEMTDLPHRLFPLDEMIPAPGQGALGIEVR 198 Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK----GSTLYFYGI 264 ++ A + +N + ER L+EL G C + IA A + G+ L I Sbjct: 199 SDDAGAMHAIANLNDAAARLAATAERKVLSELHGGCLAPIACHAKLETSNHGTELCLRAI 258 Query: 265 VLASDGK 271 V+++DG+ Sbjct: 259 VMSADGE 265 >gi|326383045|ref|ZP_08204734.1| porphobilinogen deaminase [Gordonia neofelifaecis NRRL B-59395] gi|326198181|gb|EGD55366.1| porphobilinogen deaminase [Gordonia neofelifaecis NRRL B-59395] Length = 315 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 95/275 (34%), Positives = 140/275 (50%), Gaps = 20/275 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A + L P +VII ST GD ++ + +IG G+FT Sbjct: 9 IRIGTRGSLLATTQAQDIADRLTAAGH--PAELVII--STAGD-TSSAPVAQIG-VGVFT 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 I L SGE D A+HS KD+PT L ++A R D RD +S L +L S Sbjct: 63 TAIRLALRSGECDVAIHSYKDLPTAPEDDLAMAAVPTRVDPRDALVSRDGMVLGELPSGS 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSS RR A L + + RG +++RL K+ + + AI++A AG+ R+ + V+ Sbjct: 123 VVGTSSPRRAAQLRALGLGLEIRPLRGNLDSRLGKVASGELDAIVVARAGLVRIGRADVV 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED---TWDSVNCERAFLAELDG 242 E L+ +P QGA+ +E ++ ELV+++ D T +V+ ERA LA L+ Sbjct: 183 TEALDPLVMLSAPAQGALAVECRSDD---AELVRILAELDDPSTRAAVDAERAVLATLEA 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277 C + + A S + DG+IF E+S Sbjct: 240 GCTAPVGALAEVVDS--------IDEDGRIFAELS 266 >gi|70999177|ref|XP_754310.1| porphobilinogen deaminase Hem3 [Aspergillus fumigatus Af293] gi|66851947|gb|EAL92272.1| porphobilinogen deaminase Hem3, putative [Aspergillus fumigatus Af293] gi|159127327|gb|EDP52442.1| porphobilinogen deaminase Hem3, putative [Aspergillus fumigatus A1163] Length = 362 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 93/274 (33%), Positives = 138/274 (50%), Gaps = 10/274 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA+ R L + P I L T GDR L + G K L+ Sbjct: 42 PLRIGTRRSNLAMVQTEGIRDRLQKIG--PDRTYEIEALRTAGDRDQLTALYDFGAKSLW 99 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDL 121 T E+E+KL SGE+D VH KDMPT L +++A PR+D RD I SLK L Sbjct: 100 TTELEEKLTSGELDVIVHCLKDMPTTLPDTCELAAIPPRDDPRDALIIKAGLPYTSLKSL 159 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIKRL 179 +V+GTSS+RR A L R + + RG +ETRL K+++ ++ ++++ AG++R+ Sbjct: 160 PEGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPHSEYMCMVMSAAGLERV 219 Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + I + L D + GQGA+ +E + K QEL+ + + + ER+ + Sbjct: 220 GLKHRISQYLGSRDGGILYAVGQGALGLEIRKGDRKMQELLGQLADRKSTLACLAERSLM 279 Query: 238 AELDGSCKSAIA-GFAYCKGSTLYFYGIVLASDG 270 L+G C I + L IV++ DG Sbjct: 280 RTLEGGCSVPIGVETEWMSSGDLRMDAIVVSLDG 313 >gi|219852323|ref|YP_002466755.1| porphobilinogen deaminase [Methanosphaerula palustris E1-9c] gi|219546582|gb|ACL17032.1| porphobilinogen deaminase [Methanosphaerula palustris E1-9c] Length = 294 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 94/286 (32%), Positives = 140/286 (48%), Gaps = 16/286 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA E S++ I +VI +T GD +T L EIGG+G+F Sbjct: 3 IRVGTRGSALARVQT-EKVCSMLASRGIETETVVI---TTHGDAVTGVPLHEIGGQGVFV 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++ + + EIDCAVHS KD+P G+ A L R D ++ + Sbjct: 59 RALDDAIEAQEIDCAVHSLKDVPALRPPGVLTCAVLKRNSPADFLAVDAVENPQ------ 112 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +IG+SS RR+A LLR + V RG ++TR+ KL + I+LA AG++RL Sbjct: 113 IIGSSSTRRRAQLLRHDPSLEVKQLRGNVDTRIRKLKAGEYDGIVLAEAGLQRLGLSLKG 172 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 K L +++F PSP QG + + + + L ++HE T V ERA + EL G C Sbjct: 173 KR-LPVDEFVPSPNQGTVAVVCREDPSLIETLACALDHEGTRQDVVFERAVMEELGGGC- 230 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC-DAINIGR 290 + YC+ + VLA DG + + + + +A IGR Sbjct: 231 -FVPEGVYCRDG--HLIAEVLALDGSRYQRIEADPSDVREAREIGR 273 >gi|50424323|ref|XP_460748.1| DEHA2F08888p [Debaryomyces hansenii CBS767] gi|55976377|sp|Q6BM23|HEM3_DEBHA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|49656417|emb|CAG89089.1| DEHA2F08888p [Debaryomyces hansenii] Length = 361 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/315 (31%), Positives = 156/315 (49%), Gaps = 17/315 (5%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +IG R S LA+ + + + V K P + ++ LST GD++ ++ L GGK L+T+ Sbjct: 20 QIGGRKSKLAVVQSEIVKECI--VEKFPELSCSVLALSTLGDKVQSKPLYSFGGKALWTK 77 Query: 67 EIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 E+E L+ +D VHS KD+PT L + ++ L RED RD + + +SL Sbjct: 78 ELEILLLEQVEEYPRLDLIVHSLKDIPTNLPEEFELGCILNREDARDALVMKSGSSYKSL 137 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 DL S++GTSS+RR + LL+ + RG ++TRLNKL+ N+ +LLA AG+ Sbjct: 138 ADLPDGSLVGTSSVRRSSQLLKNHPKLRFDSVRGNLQTRLNKLDDENSPFECLLLASAGL 197 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ I L+ + + GQGA+ IE + K +L+K I T ER+ Sbjct: 198 IRIGLGDRITAHLDAPEMYYAVGQGALGIEIRKGDEKMLQLLKTIEDLPTTYCCLAERSL 257 Query: 237 LAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRD 291 + L+G C I ++ ST L I+++ DG F E G N+ DA IG Sbjct: 258 MRHLEGGCSVPIGVQSHYNESTNELSLKAIIVSPDGIHFVEDEYKGVVNNKDDADAIGIK 317 Query: 292 AAQYIRFISNKNVFN 306 + + + N Sbjct: 318 VGDLLSAKGGREILN 332 >gi|314964545|gb|EFT08645.1| porphobilinogen deaminase [Propionibacterium acnes HL082PA1] Length = 315 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/232 (33%), Positives = 118/232 (50%), Gaps = 14/232 (6%) Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96 ++ + ++T GD T +L +GG G+F I L+ GE D AVHS KD+PT GL Sbjct: 12 DVNLTTITTHGDTSTA-SLAAMGGIGVFASAIRAALLEGETDIAVHSFKDLPTGRPLGLA 70 Query: 97 ISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIET 156 I A R D RD ++ +L DL + +GT S RR A LL R D++++D RG ++T Sbjct: 71 IGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAVRPDLTIVDIRGNVDT 130 Query: 157 RLNKL--------NNNKA--HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206 RL ++ N K A++LA +G+ RL + E L+ P+P QGA+ +E Sbjct: 131 RLGRVKGLGRYAKNGGKEDLDAVVLAASGLARLGHSGAVTEFLDPSVVLPAPAQGALAVE 190 Query: 207 THVNNPKAQELVKVINHED---TWDSVNCERAFLAELDGSCKSAIAGFAYCK 255 + + +L K + D T + ERA L+ L+ C + I A K Sbjct: 191 CRTADSRHGKLAKALARIDDRRTRLAATAERAVLSHLEAGCAAPIGALAQLK 242 >gi|302410259|ref|XP_003002963.1| porphobilinogen deaminase [Verticillium albo-atrum VaMs.102] gi|261357987|gb|EEY20415.1| porphobilinogen deaminase [Verticillium albo-atrum VaMs.102] Length = 353 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 106/304 (34%), Positives = 146/304 (48%), Gaps = 20/304 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+ +L + P + I + T GD+ L GGKGL+T Sbjct: 21 VRIGTRRSALAVRQTELVIEALKRIR--PDYTYEIHAMQTLGDKDQVTALYNFGGKGLWT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF-----ISHTAQSLKD 120 E+E KL + EID VHS KDMPT L +G + A + RE+ DV ++ +S+ D Sbjct: 79 NELEAKLTNNEIDVIVHSLKDMPTVLPEGCILGAVVERENPHDVVVFKDTVADQYKSIAD 138 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKR 178 L SV+GTSS+RR A L R + D RG I+TRL KL+N AI+LA AG+ R Sbjct: 139 LPAGSVVGTSSIRRIAQLKRKYPGLQFADVRGNIQTRLAKLDNPDGPFTAIILAAAGLLR 198 Query: 179 LKKEKVIKEIL--NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 + I + L + + GQGA+ IE ++ + L++ I H T + ER+ Sbjct: 199 MDLGGRIGQYLASDTGGILHAVGQGALGIEARTDDDRVLTLLRGIEHGPTRLAAEAERSV 258 Query: 237 LAELDGSCKSAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRC-----DAINIG 289 + L+G C I + G TL V DG H V R A +G Sbjct: 259 MRTLEGGCSVPIGVETTWRDDGKTLTLKASVTHVDGT--HGVDGESTRVIESPEAADQLG 316 Query: 290 RDAA 293 RD A Sbjct: 317 RDLA 320 >gi|126640355|ref|YP_001083339.1| porphobilinogen deaminase [Acinetobacter baumannii ATCC 17978] Length = 226 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 119/212 (56%) Query: 85 KDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSD 144 KD+P L +GL ++ RED D F+S+ + DL + +GTSSLRRK+ +L+ R D Sbjct: 2 KDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQGAKVGTSSLRRKSQILKQRPD 61 Query: 145 ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAIC 204 + +ID RG + TRL KL++ + AI+LA AG+KRL + I+ + P+ GQGA+ Sbjct: 62 LQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAERIRHCIEPSVSLPAVGQGALG 121 Query: 205 IETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGI 264 +E ++ + L++ + H +T V ERAF A L+G C+ IAG+A + ++ G Sbjct: 122 LECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGGCQVPIAGYATLQDGKIHIEGR 181 Query: 265 VLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 V + DG+ +A +G + A+ + Sbjct: 182 VGSVDGQTLLRAELTDEANNAQQLGENLARNL 213 >gi|313765242|gb|EFS36606.1| porphobilinogen deaminase [Propionibacterium acnes HL013PA1] gi|313793133|gb|EFS41200.1| porphobilinogen deaminase [Propionibacterium acnes HL110PA1] gi|313821951|gb|EFS59665.1| porphobilinogen deaminase [Propionibacterium acnes HL036PA1] gi|313834370|gb|EFS72084.1| porphobilinogen deaminase [Propionibacterium acnes HL056PA1] gi|314926611|gb|EFS90442.1| porphobilinogen deaminase [Propionibacterium acnes HL036PA3] gi|314931036|gb|EFS94867.1| porphobilinogen deaminase [Propionibacterium acnes HL067PA1] gi|314969645|gb|EFT13743.1| porphobilinogen deaminase [Propionibacterium acnes HL037PA1] gi|314974711|gb|EFT18806.1| porphobilinogen deaminase [Propionibacterium acnes HL053PA1] gi|314980332|gb|EFT24426.1| porphobilinogen deaminase [Propionibacterium acnes HL072PA2] gi|314985507|gb|EFT29599.1| porphobilinogen deaminase [Propionibacterium acnes HL005PA1] gi|314987331|gb|EFT31422.1| porphobilinogen deaminase [Propionibacterium acnes HL005PA2] gi|315082096|gb|EFT54072.1| porphobilinogen deaminase [Propionibacterium acnes HL078PA1] gi|315097342|gb|EFT69318.1| porphobilinogen deaminase [Propionibacterium acnes HL038PA1] gi|315099447|gb|EFT71423.1| porphobilinogen deaminase [Propionibacterium acnes HL059PA2] gi|315106337|gb|EFT78313.1| porphobilinogen deaminase [Propionibacterium acnes HL030PA1] gi|327445624|gb|EGE92278.1| porphobilinogen deaminase [Propionibacterium acnes HL013PA2] gi|327447246|gb|EGE93900.1| porphobilinogen deaminase [Propionibacterium acnes HL043PA1] gi|327457080|gb|EGF03735.1| porphobilinogen deaminase [Propionibacterium acnes HL092PA1] gi|328758364|gb|EGF71980.1| porphobilinogen deaminase [Propionibacterium acnes HL020PA1] Length = 315 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 78/232 (33%), Positives = 118/232 (50%), Gaps = 14/232 (6%) Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96 ++ + ++T GD T +L +GG G+F I L+ GE D AVHS KD+PT GL Sbjct: 12 DVNLTTITTHGDTSTA-SLAAMGGIGVFASAIRAALLEGEADIAVHSFKDLPTGRPLGLA 70 Query: 97 ISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIET 156 I A R D RD ++ +L DL + +GT S RR A LL R D++++D RG ++T Sbjct: 71 IGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAVRPDLTIVDIRGNVDT 130 Query: 157 RLNKL--------NNNKA--HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206 RL ++ N K A++LA +G+ RL + E L+ P+P QGA+ +E Sbjct: 131 RLGRVKGLGRYAKNGGKEDLDAVVLAASGLARLGHSGAVTEFLDPSVVLPAPAQGALAVE 190 Query: 207 THVNNPKAQELVKVINHED---TWDSVNCERAFLAELDGSCKSAIAGFAYCK 255 + + +L K + D T + ERA L+ L+ C + I A K Sbjct: 191 CRTADSRHGKLAKALARIDDRRTRLAATAERAVLSHLEAGCAAPIGALAQLK 242 >gi|70997451|ref|XP_753473.1| hydroxymethylbilane synthase [Aspergillus fumigatus Af293] gi|66851109|gb|EAL91435.1| hydroxymethylbilane synthase, putative [Aspergillus fumigatus Af293] gi|159126797|gb|EDP51913.1| hydroxymethylbilane synthase, putative [Aspergillus fumigatus A1163] Length = 341 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 95/291 (32%), Positives = 148/291 (50%), Gaps = 14/291 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++ F IGTR S LAL ++L P + I T GD+ T L E K Sbjct: 16 RRTFTIGTRKSKLALLQTDLVVAALK--KSWPEYTFQIHSQETAGDKNTVIALREFTTKN 73 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 L+T+E+E+ L++G++D VHS KD+PT+L + + RED RDV + S Sbjct: 74 LWTQELEELLMAGDVDLIVHSLKDVPTQLPPSCTLGPMMEREDTRDVLVMKKGLPNMSFS 133 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177 ++ SV+GTSS+RR A L R + V D RG I TRL KL+ + I+LA AG+ Sbjct: 134 EMPAGSVVGTSSIRRTAQLARRYPHLKVQDVRGNIGTRLAKLDAEDSPFTCIVLAAAGLL 193 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 RL E I + L+ ++ + GQGA+ +E ++ ++++ I H+ T + ER+ Sbjct: 194 RLGMEDRISQYLDSKNGGMLYAVGQGALGVEIRKDDKVLRDMLNSIGHQKTTLACLAERS 253 Query: 236 FLAELDGSCKSAIAGFAYC-----KGSTLYFYGIVLASDGKIFHEVSRNGN 281 L L+G C + + + S L IV++ DG+ EV +G+ Sbjct: 254 LLRTLEGGCSAPLGVETEWVQDSDRSSKLRMRAIVVSVDGRESAEVEVDGS 304 >gi|150865873|ref|XP_001385264.2| hypothetical protein PICST_47071 [Scheffersomyces stipitis CBS 6054] gi|149387129|gb|ABN67235.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 372 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 94/283 (33%), Positives = 146/283 (51%), Gaps = 16/283 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IG R S LA+ + + + + PH N I+ LST GD+I N+ L GGK L+ Sbjct: 26 IQIGGRKSTLAVVQSEIVKKEIEEAF---PHINCSILALSTLGDKIQNKPLYSFGGKSLW 82 Query: 65 TEEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---Q 116 T+E+E L+ ++D VHS KDMPT L ++ L RED RD + + Sbjct: 83 TKELEILLLDSIDEFPQLDLIVHSLKDMPTNLPDEFELGCILKREDPRDALVMRAGSPYK 142 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYA 174 +L DL SV+GTSS+RR + L++ + RG ++TRL+KL+++ I+LA A Sbjct: 143 TLDDLPAGSVVGTSSIRRSSQLVKNYPHLKFDSVRGNLQTRLSKLDDDSQPFECIILASA 202 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G+ R+ + + LN + GQGA+ +E N+ K + ++ I+H T ER Sbjct: 203 GLIRVGLGHRVTDYLNAPHMYYAVGQGALGVEIRKNDTKMKNILAKISHIPTSLCCYAER 262 Query: 235 AFLAELDGSCKSAIAGFA-YCKGS-TLYFYGIVLASDGKIFHE 275 + + L+G C I Y + S L F I+++ DG F E Sbjct: 263 SLMRYLEGGCSVPIGVHTNYDEDSKVLKFEAIIVSPDGTQFVE 305 >gi|313896614|ref|ZP_07830163.1| hydroxymethylbilane synthase [Selenomonas sp. oral taxon 137 str. F0430] gi|312974799|gb|EFR40265.1| hydroxymethylbilane synthase [Selenomonas sp. oral taxon 137 str. F0430] Length = 190 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 101/162 (62%), Gaps = 2/162 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M IGTR S LAL A L H P +V+ ++TKGD+I + L +IGG Sbjct: 1 MNSGTITIGTRASKLALWQAKFVAGELQKRH--PSVTVVLKKMTTKGDKILDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ +++G+ID AVHS KDMP ++ GL I A R D D F+S+ ++++ Sbjct: 59 KGLFTKELEQAMLAGDIDIAVHSLKDMPIEIPAGLIIGAITARLDPGDAFVSNQYAAIEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 L + +GTSSLRR+A LL R D+ ++D RG + TRL KL+ Sbjct: 119 LPAGARVGTSSLRRRAQLLAVRPDLVLLDLRGNVNTRLEKLD 160 >gi|237786464|ref|YP_002907169.1| Porphobilinogen deaminase [Corynebacterium kroppenstedtii DSM 44385] gi|237759376|gb|ACR18626.1| Porphobilinogen deaminase [Corynebacterium kroppenstedtii DSM 44385] Length = 295 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 147/299 (49%), Gaps = 20/299 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG--GKGL 63 RIGTR S LAL A R +L+ + + T GD + T + G G+ Sbjct: 2 IRIGTRGSALALTQAGHVRDALISAGL----EAELFTVHTPGD-ASQGAGTPVARIGVGV 56 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ + L +GE AVHS KD+PT ++ A PR D RDV S L DL Sbjct: 57 FTQTLRTALAAGECSLAVHSFKDLPTAPDPRFRL-AVPPRVDARDVVFSRDRIPLADLPA 115 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S+IGT + RR + R D +V+ RG ++TR+ +L + A++LA AG++RL + Sbjct: 116 GSMIGTGAPRRMGQVRALRPDCTVVPIRGNVDTRIGRLEKDL-DAVILARAGVERLGRLA 174 Query: 184 VIKEILNIEDFPPSPGQGAICIET----HVN-NPKAQELVKVINHEDTWDSVNCERAFLA 238 E L+++ P+P QGA+ +E H N + +A + V++HE + ERA LA Sbjct: 175 EATETLDVDTVLPAPAQGALAVEAVAEGHENCSEEALYAIHVLDHEMSHRRAIAERAVLA 234 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L+ C + + +A + F V A DG S G + +IG AA+Y+R Sbjct: 235 SLNAGCTAPVGAYA----TEDSFRAGVFAVDGSERVTWSSEGEPTE--DIGHQAAEYLR 287 >gi|50557014|ref|XP_505915.1| YALI0F26609p [Yarrowia lipolytica] gi|55976378|sp|Q6C097|HEM3_YARLI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|49651785|emb|CAG78727.1| YALI0F26609p [Yarrowia lipolytica] Length = 338 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 95/312 (30%), Positives = 155/312 (49%), Gaps = 15/312 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G R S LAL + L VH P ++ ++ L+T GD++ ++ L GK L+T+E Sbjct: 21 VGGRKSKLALVQTQHVAAMLKKVH--PDYSFPVLGLTTLGDQVQSKPLYSFDGKALWTKE 78 Query: 68 IEKKLIS-----GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 +E L+ + D VHS KDMPT L G ++ A L RED RD + ++L Sbjct: 79 LETLLLEKVPGFDQQDIIVHSLKDMPTVLPDGCELGAILTREDPRDALVMAAGSPYKTLA 138 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177 DL SV+GTSS+RR A L + + RG + TRL+KL++ + ++LA AG+K Sbjct: 139 DLPAGSVVGTSSIRRSAQLKKSYPGLVYESVRGNVGTRLSKLDDPETPYKCLILAAAGLK 198 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I L D + GQGA+ +E + K +++++ I +++ ERA + Sbjct: 199 RLDLGDRITGYLQKPDMLHAVGQGALGLEIRQGDEKTKKILEAIYDKESTLCCLAERAVM 258 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR---NGNRCDAINIGRDAAQ 294 L+G C I + L IV++ +G F E ++ +A +G+D A+ Sbjct: 259 RTLEGGCSVPIGVETKYENGKLTLDAIVVSVEGTEFVECTQVRAVEENWEAEQLGKDVAE 318 Query: 295 YIRFISNKNVFN 306 + K + + Sbjct: 319 QLVKDGAKKILD 330 >gi|297618662|ref|YP_003706767.1| porphobilinogen deaminase [Methanococcus voltae A3] gi|297377639|gb|ADI35794.1| porphobilinogen deaminase [Methanococcus voltae A3] Length = 316 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 88/255 (34%), Positives = 131/255 (51%), Gaps = 17/255 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSL-MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA+ L ++ + II + T GD+ N+ L ++G G+F Sbjct: 5 IRIGTRGSKLAMVQTNYVNEILNKEIQTNKDIDTEIIKIKTVGDKDQNKKLVDLG-LGVF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+EI+K ++ E D AVHS KD+PT L I A PRE D+ I + L Sbjct: 64 TKEIDKSMLLNETDIAVHSLKDVPTLWSDELIIKAVPPRESYNDLLIWKKNRKLNVFQDD 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 V+GTSS+RR A L ++ V RG ++TRL KL++ + AI++A AG+ RL Sbjct: 124 IVVGTSSIRRAAFLEIRYPNLDVKLLRGNVQTRLKKLDDEEYDAIIMAEAGLNRLN---- 179 Query: 185 IKEILNIEDFP-------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 +N+ED+ P+P QGAI I T + + E+V++++ + T V ER L Sbjct: 180 ----INLEDYNYEVLNMLPAPAQGAIGIATRKADEEINEIVELLDDKKTHLEVLAERNAL 235 Query: 238 AELDGSCKSAIAGFA 252 E G C++ A Sbjct: 236 KEYGGGCQAPFGALA 250 >gi|295395608|ref|ZP_06805802.1| exopolyphosphatase [Brevibacterium mcbrellneri ATCC 49030] gi|294971627|gb|EFG47508.1| exopolyphosphatase [Brevibacterium mcbrellneri ATCC 49030] Length = 821 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 93/300 (31%), Positives = 149/300 (49%), Gaps = 23/300 (7%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHK-IPPHN---IVIIPLSTKGDRITNRTLTEIG 59 + R+GTR S LA RS + V + I H + I+ + T+GD + L +G Sbjct: 499 RTVRLGTRRSNLA-------RSQSVGVAQDIAAHTGWRVEIVEVVTEGD-VNMTPLANMG 550 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G G+F + + L+SG+ID AVHS KD+PT G+ ++A PR D DV ++ + Sbjct: 551 GTGVFVSAVRQALLSGKIDIAVHSLKDLPTAQAPGITLAAVPPRVDPSDVLVARDGLTFD 610 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +V+GT S RR A + R D+ + RG ++TR+ + + + A++LA AG++RL Sbjct: 611 TLPQGAVVGTGSPRRAAQMRAARPDLDIRGVRGNVDTRIKYVTDGRLDAVVLAAAGMRRL 670 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNN-------PKAQELVKVINHEDTWDSVNC 232 + + + L E P+PGQGA+ IE N K + + I+ E T+ +V Sbjct: 671 GRLAEVSQTLTTELMLPAPGQGALAIECRAENADREPFDAKLRSGLLAIHDETTYRAVVA 730 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK---IFHEVSRNGNRCDAINIG 289 ERA L+ C + I A ++ ++ GK I V+ G AI++G Sbjct: 731 ERAILSRAQAGCSAPIGALANVTERSIELSAVMADDAGKLARITRSVANTGVNA-AIDVG 789 >gi|330507063|ref|YP_004383491.1| porphobilinogen deaminase [Methanosaeta concilii GP-6] gi|328927871|gb|AEB67673.1| porphobilinogen deaminase [Methanosaeta concilii GP-6] Length = 305 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 88/268 (32%), Positives = 140/268 (52%), Gaps = 8/268 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR SPLAL + L K + + T GD ++ L ++ G G+F E Sbjct: 1 MGTRGSPLALRQTQIVQERL----KGLGIQTQLCRVKTSGDVFLDKPLHQLTGFGVFVAE 56 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI--SHTAQSLKDLALHS 125 I+++++SG+ID AVHS KD+PTK + L +SA L R+ DV + + +S+++L + Sbjct: 57 IDERMLSGKIDLAVHSMKDLPTKRPEELIVSAVLKRDSPYDVLLCREKSVKSIEELDQGA 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS+RR A LLR R D++++ RG ++TRL+KL AI+LA AG++R+ Sbjct: 117 RVGTSSMRRMAQLLRARPDLNILSLRGNLQTRLSKLERGDYDAIVLAEAGLERMGYHPDY 176 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ E F PS QG I + + +A+ + ++ ER + + G C Sbjct: 177 VR-LDGERFVPSANQGTIIVVAKAGS-EAEACSRALDDAHARSETMIERKIMETVGGGCV 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +A A + VL+ DGK F Sbjct: 235 VPMAVHALVQKGEARVLAEVLSPDGKRF 262 >gi|316935323|ref|YP_004110305.1| porphobilinogen deaminase [Rhodopseudomonas palustris DX-1] gi|315603037|gb|ADU45572.1| porphobilinogen deaminase [Rhodopseudomonas palustris DX-1] Length = 326 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 147/308 (47%), Gaps = 22/308 (7%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSL-MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K P RIGTR S +ALA + L ++ P II T GD L GGK Sbjct: 2 KFPVRIGTRKSVMALAQTEDIAKQLSAAASELDPQ---IIKFETVGDSDQISKLLPHGGK 58 Query: 62 G-LFTEEIEKKLISGEIDCAVHSAKDMPT-KLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G F EI ++ GE+ CA+HS KDMP + GL ++A L R+ D + +L+ Sbjct: 59 GGAFVAEIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPACDSLVLRKGLTLE 118 Query: 120 DL----ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK---------- 165 DL IGT+++RR A R ++ VI FRG ++R+ KL+N + Sbjct: 119 DLKKSRGKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADSRMRKLDNGEKQRMPDGSEV 178 Query: 166 --AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223 A A+++A AGI+R+ I E+ P+ GQG + +E V+ K ++ + +I++ Sbjct: 179 GPADALIMARAGIERVGFVDRIAHDFTPEEMLPAAGQGIVAVECPVHEWKTRQYLALIDN 238 Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283 + + ER L L+G C S IA + G + VL +G +F E R G Sbjct: 239 HQSRLCCDAEREVLWVLNGHCNSPIAAHSIITGDEMTLRASVLDLEGGMFIEAVRTGPAN 298 Query: 284 DAINIGRD 291 +GRD Sbjct: 299 RPRELGRD 306 >gi|313814512|gb|EFS52226.1| porphobilinogen deaminase [Propionibacterium acnes HL025PA1] gi|314922347|gb|EFS86178.1| porphobilinogen deaminase [Propionibacterium acnes HL001PA1] gi|314965338|gb|EFT09437.1| porphobilinogen deaminase [Propionibacterium acnes HL082PA2] gi|314982570|gb|EFT26662.1| porphobilinogen deaminase [Propionibacterium acnes HL110PA3] gi|315091095|gb|EFT63071.1| porphobilinogen deaminase [Propionibacterium acnes HL110PA4] gi|315094182|gb|EFT66158.1| porphobilinogen deaminase [Propionibacterium acnes HL060PA1] gi|315104838|gb|EFT76814.1| porphobilinogen deaminase [Propionibacterium acnes HL050PA2] Length = 315 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 76/232 (32%), Positives = 116/232 (50%), Gaps = 14/232 (6%) Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96 ++ + ++T GD T +L +GG G+F I L+ GE D AVHS KD+PT GL Sbjct: 12 DVDLTTITTHGDTSTA-SLAAMGGIGVFASAIRATLLKGEADIAVHSFKDLPTGRPLGLA 70 Query: 97 ISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIET 156 I A R D RD ++ +L DL + +GT S RR A LL R D++++D RG ++T Sbjct: 71 IGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAVRPDLTIVDIRGNVDT 130 Query: 157 RLNKL----------NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206 RL ++ A++LA +G+ RL + E L+ P+P QGA+ +E Sbjct: 131 RLGRVKGLGHYAKGGGKEDLDAVVLAASGLARLGHSGTVTEFLDPSVVLPAPAQGALAVE 190 Query: 207 THVNNPKAQELVKVINHED---TWDSVNCERAFLAELDGSCKSAIAGFAYCK 255 + + +L K + D T + ERA L+ L+ C + I A K Sbjct: 191 CRTADSRHGKLAKALARIDDRRTRLAATAERAVLSHLEAGCAAPIGALAQLK 242 >gi|254445937|ref|ZP_05059413.1| porphobilinogen deaminase [Verrucomicrobiae bacterium DG1235] gi|198260245|gb|EDY84553.1| porphobilinogen deaminase [Verrucomicrobiae bacterium DG1235] Length = 291 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 93/256 (36%), Positives = 132/256 (51%), Gaps = 24/256 (9%) Query: 4 KPFR---IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 KP R I TR SPLA+A + +P I + T GD+ +L + GG Sbjct: 3 KPAREYVIATRKSPLAMAQTHLAKELFQ--RGMPDAVFRIEKMVTTGDKRQEWSLEKQGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E L+ G D AVHSAKD+P+++ KGL ++ +LPR+ DV I L+D Sbjct: 61 KGLFTKELEDALLEGRADFAVHSAKDLPSEMPKGLALAGFLPRQTCEDVLI------LRD 114 Query: 121 -LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 + +I T S RR+ L + RG ++TRL K+ A A +LA AG+ RL Sbjct: 115 GVESPKLIATGSPRRRIQLRYLFPKAEFTEIRGNVDTRLTKIARGDADATVLASAGLNRL 174 Query: 180 ---KKEKVIKEILNIEDFPPSPGQGAI---CIETHVNNPKAQELVKVINHEDTWDSVNCE 233 E V L +++ P+ GQ A+ C E V+ +A E+T +VN E Sbjct: 175 GIESWEGVTFRKLTLDECVPAVGQAAVAIQCREEDVDTFRAH------LDEETAIAVNLE 228 Query: 234 RAFLAELDGSCKSAIA 249 R+FL EL G C+ A A Sbjct: 229 RSFLEELGGGCQVAFA 244 >gi|90422760|ref|YP_531130.1| porphobilinogen deaminase [Rhodopseudomonas palustris BisB18] gi|90104774|gb|ABD86811.1| hydroxymethylbilane synthase [Rhodopseudomonas palustris BisB18] Length = 326 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/313 (31%), Positives = 151/313 (48%), Gaps = 32/313 (10%) Query: 5 PFRIGTRCSPLALAHA------FETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 P RIGTR S +ALA +S +DV I+ T GD L Sbjct: 4 PVRIGTRKSIMALAQTEDIARRLSAAASELDVE--------IVKFETVGDSDQVSKLLPH 55 Query: 59 GGKG-LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQ 116 GGKG F EI + +G+++ +HS KDMP + GL I A L R+ D + Sbjct: 56 GGKGGAFVAEIRAAVTAGKLEACMHSLKDMPGNEDTPGLIIGATLSRDPPTDALVLRKGL 115 Query: 117 SLKDL----ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK------- 165 +L+DL IGT+++RR A R +++VI FRG +TR+ KL+N + Sbjct: 116 TLEDLRKSRGKGYTIGTNAVRRAAYAKRLFPEVNVIHFRGAADTRVRKLDNAEKQRLPDG 175 Query: 166 -----AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220 A A+++A +G++R+ I ++ PS GQG + +E VNN + ++ +++ Sbjct: 176 GHVGPADALIMARSGLERVGFVDRIVHDFTPQEMLPSAGQGIVAVECAVNNWQIRKYLEL 235 Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 I+ S + ER L L+G C S +A F+ KGS + VL +G +F E SR+G Sbjct: 236 IDDPVARLSCDAEREVLWVLNGHCNSPMAAFSTIKGSEMTLSASVLDEEGGLFIEASRSG 295 Query: 281 NRCDAINIGRDAA 293 +GR A Sbjct: 296 PANRPRELGRAVA 308 >gi|296131260|ref|YP_003638510.1| porphobilinogen deaminase [Cellulomonas flavigena DSM 20109] gi|296023075|gb|ADG76311.1| porphobilinogen deaminase [Cellulomonas flavigena DSM 20109] Length = 342 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 87/285 (30%), Positives = 129/285 (45%), Gaps = 37/285 (12%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL +L D+ + + + T+GDR+ +L +GG G+F Sbjct: 5 VRIGTRASALALTQTGHVADALADLAD---LAVETVRVRTQGDRV-RASLASLGGTGVFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + L+ G D AVHS KD+PT GL ++A PR D RD + +L L + Sbjct: 61 TALRDALLDGRCDVAVHSLKDLPTGPADGLVVAAVPPRADARDALCARDGLTLATLPAGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA------------------- 166 IGT S RR A L R D+ V+D RG + TRL ++ A Sbjct: 121 RIGTGSPRRAAQLRALRPDVDVVDIRGNVGTRLGRVRGLDATTVATGSQVGPDAPHPGVA 180 Query: 167 --------HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH-----VNNPK 213 A++LA AG+ RL + + E + P+PGQGA+ +E + P Sbjct: 181 TDAPRGDLDAVVLAAAGLGRLGRLDAVTEWFAPDVLAPAPGQGALAVEVRTADAAADTPL 240 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST 258 A L + ++ T +V ERA LA L+ C + + + +T Sbjct: 241 AHAL-RALDDPPTRRAVVAERAVLARLEAGCAAPVGAWGRVDDAT 284 >gi|333025240|ref|ZP_08453304.1| putative porphobilinogen deaminase [Streptomyces sp. Tu6071] gi|332745092|gb|EGJ75533.1| putative porphobilinogen deaminase [Streptomyces sp. Tu6071] Length = 307 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 83/262 (31%), Positives = 137/262 (52%), Gaps = 20/262 (7%) Query: 36 HNIVIIPLSTKGDRITNRT-LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKG 94 ++ ++ ++T GD T+R L IGG G+F + L+ G++D AVHS KD+PT +G Sbjct: 17 RSVELVEITTYGD--TSREHLARIGGTGVFVTALRDALLRGDVDFAVHSLKDLPTAQPEG 74 Query: 95 LQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALL-LRWRS---DISVIDF 150 L ++A RED RD I+ +L+ L + IGT S RR A L R+ DI + Sbjct: 75 LALAAVPRREDPRDALIARDGLTLERLPRGARIGTGSPRRMAQLNAHARAHGLDIETVPI 134 Query: 151 RGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVN 210 RG ++TR+N + + + A++LA AG+ RL + + L + P+PGQGA+ +E Sbjct: 135 RGNVDTRINFVRDGELDAVVLAAAGLNRLGRGGEVTAYLASDTVLPAPGQGALAVECP-P 193 Query: 211 NPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST-----------L 259 P A+ L + ++ T +V ERA LA L+ C + + A G+ + Sbjct: 194 GPLAEALAR-LDDPRTRAAVTAERALLAALEAGCSAPVGALADFTGAPQDQAAQRQTTEM 252 Query: 260 YFYGIVLASDGKIFHEVSRNGN 281 G+V ++DG +++ G+ Sbjct: 253 RLRGVVGSTDGSELVQLTTTGH 274 >gi|156846242|ref|XP_001646009.1| hypothetical protein Kpol_1031p58 [Vanderwaltozyma polyspora DSM 70294] gi|156116680|gb|EDO18151.1| hypothetical protein Kpol_1031p58 [Vanderwaltozyma polyspora DSM 70294] Length = 327 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/321 (31%), Positives = 158/321 (49%), Gaps = 17/321 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K+ IG R S LA+A + + + + + + P + I+ L T GD+I ++ L GG Sbjct: 1 MSKEVLVIGGRSSKLAVAQSTKVKELIEE--QFPQYECRIVALKTLGDQIQSKPLYSFGG 58 Query: 61 KGLFTEEIEKKLISGE----IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF---ISH 113 K ++T+E+E L + ID VHS KD+PT L G +I A R D D I Sbjct: 59 KAVWTKELEDLLYHEDAKERIDLIVHSLKDVPTLLPDGFEIGAITKRVDPSDCLVMPIDS 118 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILL 171 +SL DL S++GTSS+RR A L R + RG I TRL K+++ ++H I+L Sbjct: 119 KYKSLDDLPNGSIVGTSSIRRSAQLKRRYPHLKFESVRGNIHTRLKKVDDPESHYQCIIL 178 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ R+ E I + N + GQGA+ IE + K + ++ I+ E+T Sbjct: 179 AAAGLIRMGLESRITQTFNSTMMYHAVGQGAMGIEIREGDEKLRNILSKISDEETTVCCL 238 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGS--TLYFYGIVLASDG----KIFHEVSRNGNRCDA 285 ER+ + L+G C I S L GIV+ DG + H + ++ D+ Sbjct: 239 AERSLMRTLEGGCSVPIGVETKYDASKKELLLKGIVVDVDGTKAIEEQHSIIIQDSKEDS 298 Query: 286 INIGRDAAQYIRFISNKNVFN 306 + G+ A+ ++ K + + Sbjct: 299 MACGKALAEKMKQAGAKTILD 319 >gi|227832129|ref|YP_002833836.1| Porphobilinogen deaminase [Corynebacterium aurimucosum ATCC 700975] gi|262184020|ref|ZP_06043441.1| porphobilinogen deaminase [Corynebacterium aurimucosum ATCC 700975] gi|254800247|sp|C3PKG2|HEM3_CORA7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|227453145|gb|ACP31898.1| Porphobilinogen deaminase [Corynebacterium aurimucosum ATCC 700975] Length = 296 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 88/286 (30%), Positives = 144/286 (50%), Gaps = 10/286 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LA + + L +IV +T+GD N E G G+FT Sbjct: 2 LKIGTRGSLLATTQSGHVQEWLQQKGYEAELHIV----TTQGD--VNMAPVERIGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124 + + + + GE + AVHS KD+PT + + +P R+D+R+ I+ +LK+L Sbjct: 56 QALREAVDRGECEIAVHSFKDLPTAADERFDL--VVPQRQDVREALIARDGLTLKELPEG 113 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTS+ RR + L R D+ + RG I+TR+ K+ + + A+LLAYAG+ R + Sbjct: 114 ARVGTSAPRRISQLRAMRPDLDIRPLRGNIDTRMGKVTSGELDAVLLAYAGLVRAGYAER 173 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E+ + E F P+P QGA+ IE V +A + + ++ + ER L++L+ C Sbjct: 174 ATEVFDPEVFMPAPAQGALAIEA-VKGTEAAKAIALLADGPATAATRAERTVLSQLEAGC 232 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 + +A ++ +G L G V A DG G +A +GR Sbjct: 233 TAPVAATSHWEGEQLVVRGGVFALDGSRQLIAQAQGAASEAEELGR 278 >gi|291518806|emb|CBK74027.1| porphobilinogen deaminase [Butyrivibrio fibrisolvens 16/4] Length = 239 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 82/207 (39%), Positives = 114/207 (55%), Gaps = 9/207 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN-IVIIPLSTKGDRITNRTLTEIGGKGLF 64 ++GTR S LAL +T + + K P N ++ + T GD +R L +IG KGLF Sbjct: 3 IKVGTRGSKLALV---QTNYVIEQLKKAFPENEYEVVVIKTTGDIDQSRPLDQIGSKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE+ L++ EI AVHS KDMP+K KG + RED RDV I S+++L + Sbjct: 60 VDEIERALVADEIQLAVHSMKDMPSKPAKGCVFAKSWTREDARDVIIFREVDSIEELPKN 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-----HAILLAYAGIKRL 179 + I T S RR LL R D+ + RG I+TRL KL + I+LA AG+ RL Sbjct: 120 AKIATGSKRRSYQLLSLRPDLELCPIRGNIDTRLRKLVEGNSDGTILDGIVLAAAGLNRL 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIE 206 K +IL +++ PSP QG + IE Sbjct: 180 KISLDHYQILEVDEMIPSPAQGTLAIE 206 >gi|302884312|ref|XP_003041052.1| hypothetical protein NECHADRAFT_81309 [Nectria haematococca mpVI 77-13-4] gi|256721948|gb|EEU35339.1| hypothetical protein NECHADRAFT_81309 [Nectria haematococca mpVI 77-13-4] Length = 332 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 88/254 (34%), Positives = 133/254 (52%), Gaps = 9/254 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + P RIGTR S LA+ A R SL + P I L T GD+ + L G K Sbjct: 8 QPPLRIGTRRSNLAMVQAEGIRDSLQKIA--PDRTFEIEALKTLGDKDKSTALYSFGAKN 65 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 L+T E+E+KL SG+ID VH KDMPTKL +++A R+D RD I + +LK Sbjct: 66 LWTTELEEKLTSGDIDVVVHCLKDMPTKLPDTCELTAIPLRDDPRDALIVKASLPYNNLK 125 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIK 177 L +V+GTSS+RR A L R + + RG +ETRL K+++ ++ ++++ G++ Sbjct: 126 TLPEGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPESEYTCMIMSACGLQ 185 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R+ I + L +D + GQGA+ +E + K EL+ + + + + ERA Sbjct: 186 RVGLGHRITQFLGSKDGGIYHAVGQGALGLEIRKGDTKTLELINQLVDQKSTLACLAERA 245 Query: 236 FLAELDGSCKSAIA 249 L L+G C I Sbjct: 246 LLRTLEGGCTVPIG 259 >gi|227505107|ref|ZP_03935156.1| porphobilinogen deaminase [Corynebacterium striatum ATCC 6940] gi|227198310|gb|EEI78358.1| porphobilinogen deaminase [Corynebacterium striatum ATCC 6940] Length = 295 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 89/285 (31%), Positives = 143/285 (50%), Gaps = 10/285 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F+IGTR S LA + R L +IV +T GD N E G G+FT Sbjct: 2 FKIGTRGSKLATTQSGHVREWLKANGFESELHIV----TTHGD--VNMAPVERIGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124 + + + L GE D AVHS KD+PT + + +P R+D+R+ ++ +L L Sbjct: 56 QALREALYGGECDIAVHSFKDLPTAADERFLL--VVPERQDVREALVARDGLTLAQLPEG 113 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTS+ RR + L R D+ + RG I+TR+ K+ + + A++LAYAG+ R + + Sbjct: 114 ARVGTSAPRRISQLKAMRPDLDIQPLRGNIDTRMGKVTSGELDAVVLAYAGLVRADYQDM 173 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E+ + F P+P QGA+ IE ++ A+ + +I+ + + S+ ER L+ L+ C Sbjct: 174 ASEVFAPDTFMPAPAQGALAIEAVKDSAAARAIETLIDEQASAASLG-ERTVLSRLEAGC 232 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 + +A + + L G V A DG S G DA +G Sbjct: 233 TAPVAATSTIENGQLTVRGGVFALDGSRQLLASATGPLSDAAQLG 277 >gi|326472408|gb|EGD96417.1| porphobilinogen deaminase [Trichophyton tonsurans CBS 112818] gi|326481632|gb|EGE05642.1| porphobilinogen deaminase [Trichophyton equinum CBS 127.97] Length = 331 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 101/293 (34%), Positives = 148/293 (50%), Gaps = 17/293 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K F IGTR S LA+ R +L V + P + GD L E K Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRDAL--VARWPDCEFNVHTRDAAGDLNKVTPLREFTSKN 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119 L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q +L Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPEACTLSAIMKREDPRDALVVKRGQPKTTLA 122 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177 +L SV+GTSS+RR A L R + VID RG I+TRL KL+ I+LA AG+ Sbjct: 123 ELPAGSVVGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER Sbjct: 183 RSGHGDRIAQYLDSKNGKMLHAVGQGALGVEIRADDEKMVEMLREIGDQKTTFACLAERN 242 Query: 236 FLAELDGSCKSAIAGF-------AYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281 L L+G C SA G A KG L IV + DGK E+ ++ N Sbjct: 243 LLRTLEGGC-SAPLGVETEWVPDASGKGEMLRLRCIVTSIDGKEAVEIEKDCN 294 >gi|289615845|emb|CBI57434.1| unnamed protein product [Sordaria macrospora] Length = 338 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 152/312 (48%), Gaps = 19/312 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K+ IGTR S LAL ++L H P + + L+T GD+ +L +G K Sbjct: 5 QKQTVHIGTRRSALALRQVDLVIAALQPHH--PNVHFQVHALATLGDKNQTASLPSLG-K 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS---- 117 GL+T E+E KL + E+D VH KD+PT L +G +I RED RDV + + Sbjct: 62 GLWTNELEAKLFNNEVDFIVHCLKDVPTTLPEGGKIGVVTEREDPRDVVVMKKKWAEQGK 121 Query: 118 ---LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 L DL +++GTSS+RR A L R + D RG IETR+ K + I+LA A Sbjct: 122 YKVLADLPEGAIVGTSSVRRAAQLRRQYPGLVFKDVRGNIETRMRKCDEEDYDCIILAAA 181 Query: 175 GIKRLKKEKVIKEILNIE----DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 G+ R+ ++ I + L+ + GQGA+ +E + K E++K + HE T + Sbjct: 182 GLLRMGYDERIAQWLDSTTEGGGMLHAVGQGALAMEIREGDEKTLEIIKPLCHEKTMVAT 241 Query: 231 NCERAFLAELDGSCKSAIA-GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 ERA + L+G C I + + L V++ DGK S +G + + Sbjct: 242 FAERAVMRSLEGGCSVPIGVETKWVEDDKLQLKATVVSLDGK----ESVDGQSVEVVKTT 297 Query: 290 RDAAQYIRFISN 301 +A + R ++ Sbjct: 298 EEAEEMGRKLAE 309 >gi|315110126|gb|EFT82102.1| porphobilinogen deaminase [Propionibacterium acnes HL030PA2] Length = 315 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 77/232 (33%), Positives = 117/232 (50%), Gaps = 14/232 (6%) Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96 ++ + ++T GD T +L +GG G+F I L+ GE D AVHS KD+PT GL Sbjct: 12 DVNLTTITTHGDTSTA-SLAAMGGIGVFASAIRAALLEGEADIAVHSFKDLPTGRPLGLA 70 Query: 97 ISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIET 156 I A R D RD ++ +L DL + +GT S RR A LL R D++++D RG ++T Sbjct: 71 IGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAVRPDLTIVDIRGNVDT 130 Query: 157 RLNKL--------NNNKA--HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206 RL ++ N K A++LA +G+ RL + E L+ P+P QGA+ +E Sbjct: 131 RLGRVKGLGRYAKNGGKEDLDAVVLAASGLARLGHSGAVTEFLDPSVVLPAPAQGALAVE 190 Query: 207 THVNNPKAQELVKVINHED---TWDSVNCERAFLAELDGSCKSAIAGFAYCK 255 + + + K + D T + ERA L+ L+ C + I A K Sbjct: 191 CRTADSRHGKFAKALARIDDRRTRLAATAERAVLSHLEAGCAAPIGALAQLK 242 >gi|212695966|ref|ZP_03304094.1| hypothetical protein ANHYDRO_00499 [Anaerococcus hydrogenalis DSM 7454] gi|212677089|gb|EEB36696.1| hypothetical protein ANHYDRO_00499 [Anaerococcus hydrogenalis DSM 7454] Length = 318 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 92/292 (31%), Positives = 146/292 (50%), Gaps = 6/292 (2%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +IG+R S LAL A + + D+ + I+ +STKGDRI +R + ++ KG+F Sbjct: 3 KIGSRASKLALIQA----NMVKDILEKEGLEAQIVEISTKGDRIRDRKIDQLNSKGVFVR 58 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE+KL+ ID AVHS KDMP+++ L + L ED RD F+ D +++ Sbjct: 59 EIEEKLLDKTIDIAVHSLKDMPSQIDDRLIFTPPLKGEDPRDCFVGKDVFKKMDDLNNAL 118 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GT S RR S+I RG +ETR+ K+ + ++LA +G+ R + I Sbjct: 119 VGTGSNRRVCQGKNHFSNIKFKAIRGNVETRIKKVQSENLDGVILAKSGLIRAGLDGEIN 178 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ F PSP QG + IE + K E+ K + E T + ERAF EL C + Sbjct: 179 FDLDPHIFTPSPCQGILGIEIRKEDKKLFEIFKKNSDEKTLFRMETERAFQKELGADCST 238 Query: 247 AIAGFAYCKGSTLYFYG-IVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + F + G + D +I +E +GN + I++ + A+ ++ Sbjct: 239 PMGIFTEIDHDKITLTGSMAFDKDDRINYE-RVSGNISERIHLAQKLARTLK 289 >gi|164423255|ref|XP_001728039.1| porphobilinogen deaminase [Neurospora crassa OR74A] gi|55976426|sp|Q6MW51|HEM3_NEUCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|38566782|emb|CAE76093.1| related to hydroxymethylbilane synthase [Neurospora crassa] gi|157070012|gb|EDO64948.1| porphobilinogen deaminase [Neurospora crassa OR74A] Length = 337 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 97/282 (34%), Positives = 141/282 (50%), Gaps = 15/282 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K+ IGTR S LAL ++L H P + + L+T GD+ +L +G K Sbjct: 4 QKETVHIGTRRSALALRQVDLVIAALQPHH--PNVHFQVHALATLGDKNQTASLPSLG-K 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA------ 115 GL+T E+E KL + E+D VH KDMPT L +G +I RED RDV + Sbjct: 61 GLWTNELEAKLFNKEVDFIVHCLKDMPTTLPEGGKIGVVTEREDPRDVVVMKKKWAEQGK 120 Query: 116 -QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 +SL DL +++GTSS+RR A L R + D RG IETR+ K + I+LA A Sbjct: 121 YKSLADLPEGAIVGTSSVRRAAQLRRRYPGLVFKDVRGNIETRMRKCDEEDYDCIILAAA 180 Query: 175 GIKRLKKEKVIKEILNIE----DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 G+ R+ ++ I + L+ + GQGA+ +E + K E++K + HE T + Sbjct: 181 GLLRMGYDERIAQWLDSTTEGGGMLHAVGQGALAMEIREGDEKTLEIIKPLCHEKTMVAT 240 Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGS-TLYFYGIVLASDGK 271 ERA + L+G C I G L V++ DGK Sbjct: 241 FAERAVMRTLEGGCSVPIGVETKWVGEDQLQLKVTVVSLDGK 282 >gi|15897134|ref|NP_341739.1| porphobilinogen deaminase [Sulfolobus solfataricus P2] gi|284174377|ref|ZP_06388346.1| porphobilinogen deaminase [Sulfolobus solfataricus 98/2] gi|25453029|sp|Q980U4|HEM3_SULSO RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|13813317|gb|AAK40529.1| Porphobilinogen deaminase [Sulfolobus solfataricus P2] gi|261601798|gb|ACX91401.1| porphobilinogen deaminase [Sulfolobus solfataricus 98/2] Length = 293 Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 84/244 (34%), Positives = 135/244 (55%), Gaps = 8/244 (3%) Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99 +I + TK D + L+++G KG+F +E+ + ++ G+ D AVHS KD+ +++ L+I A Sbjct: 33 VIDIKTKADLFSTEPLSKLG-KGVFEKEVNEAVLEGKADVAVHSMKDILSEINPELEIFA 91 Query: 100 YLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159 + R+ D+ I+ ++L L ++ IGTSS+RRK + R +I+ D RG ++TR+ Sbjct: 92 VIERDPPYDILIAE--KNLHKLDPNTTIGTSSIRRKNFIKYIRPEINTKDIRGNVDTRIR 149 Query: 160 KLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219 K + + ++LA A IKRL + LN+ DF P QG I + + K +E+ K Sbjct: 150 KYLSKEYDGLILAEASIKRLNIS-ISYHRLNVYDFTPEANQGIIVVLGRKKDEKVKEVFK 208 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG--KIFHEVS 277 I H+DT D ERA ++ + G C S I +G FYGI SDG KI +S Sbjct: 209 EITHKDTLDEALAERATISVVGGGCHSPIGVLFRKEGKE--FYGIASYSDGKKKITVSIS 266 Query: 278 RNGN 281 + G+ Sbjct: 267 KAGD 270 >gi|327297350|ref|XP_003233369.1| porphobilinogen deaminase [Trichophyton rubrum CBS 118892] gi|326464675|gb|EGD90128.1| porphobilinogen deaminase [Trichophyton rubrum CBS 118892] Length = 331 Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 101/293 (34%), Positives = 148/293 (50%), Gaps = 17/293 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K F IGTR S LA+ R +L V + P + GD L E K Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRDAL--VARWPDCEFNVHTRDAAGDLNKITPLREFTSKN 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119 L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q +L Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPEACTLSAIMKREDPRDALVVKKGQPKTTLA 122 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177 +L SV+GTSS+RR A L R + VID RG I+TRL KL+ I+LA AG+ Sbjct: 123 ELPAGSVVGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER Sbjct: 183 RSGHGDRIAQYLDSKNGKMLHAVGQGALGVEIRADDEKMVEMLREIGDQKTTFACLAERN 242 Query: 236 FLAELDGSCKSAIAGF-------AYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281 L L+G C SA G A KG L IV + DGK E+ ++ N Sbjct: 243 LLRTLEGGC-SAPLGVETEWVPDASGKGEMLRLRCIVTSIDGKEAVEIEKDCN 294 >gi|300770169|ref|ZP_07080048.1| hydroxymethylbilane synthase [Sphingobacterium spiritivorum ATCC 33861] gi|300762645|gb|EFK59462.1| hydroxymethylbilane synthase [Sphingobacterium spiritivorum ATCC 33861] Length = 528 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 90/262 (34%), Positives = 139/262 (53%), Gaps = 24/262 (9%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LA+ A + L ++ T+GD I + L ++ GKG FT+E Sbjct: 7 IGTRGSQLAMWQANHIKDRLAAAGIDSELKVI----KTQGDIIQHLRLDKLEGKGFFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD------- 120 +E++L+S ID AVHS KD+PT GL I+A RE ++ I LKD Sbjct: 63 LEEELLSSTIDLAVHSHKDLPTVNPPGLIIAAVSERESPAELLI-----VLKDCVDIKKR 117 Query: 121 --LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L ++ +GTSS RRKA LL R D+ D RG ++TR+ KL + AI+LA AG++R Sbjct: 118 LSLKHNATVGTSSNRRKAQLLSLRPDLEFDDLRGNLQTRIQKLRDENYDAIILAKAGVER 177 Query: 179 LK---KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + E ++EI +E P+P QG + I+ ++ + E ++VI++++ + + ER Sbjct: 178 IDMDLSEFYVEEIPPVE-LIPAPAQGVLAIQIRESDQELYEALQVIHNKEVAEVIAVERK 236 Query: 236 FLAELDGSCKSAIAGFAYCKGS 257 L D C + + YC+ S Sbjct: 237 VLNLFDAGCHAPLG--CYCRKS 256 >gi|229581489|ref|YP_002839888.1| porphobilinogen deaminase [Sulfolobus islandicus Y.N.15.51] gi|259709752|sp|C3NF70|HEM3_SULIN RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|228012205|gb|ACP47966.1| porphobilinogen deaminase [Sulfolobus islandicus Y.N.15.51] Length = 293 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 86/244 (35%), Positives = 133/244 (54%), Gaps = 8/244 (3%) Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99 II + TK D + L+++G KG+F +E+ + ++ G+ D AVHS KD+ +++ L+I A Sbjct: 33 IIDIKTKADLFSTEPLSKLG-KGVFEKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFA 91 Query: 100 YLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159 L R+ D+ I+ ++L L + IGTSS+RRK L + +I+ D RG ++TR+ Sbjct: 92 VLKRDPPYDILIAE--KNLDKLDSNITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIR 149 Query: 160 KLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219 K + + ++LA A +KRL LN+ DF P QG I + K +E+ K Sbjct: 150 KYLSKEYQGLILAEASLKRLNMTMNYHR-LNVYDFTPEANQGIIVALGRKKDEKIKEIFK 208 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG--KIFHEVS 277 INH+DT D ERA ++ + G C S I +G FYGI SDG KI +S Sbjct: 209 EINHKDTLDEALAERAVISLVGGGCHSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS 266 Query: 278 RNGN 281 + G+ Sbjct: 267 KPGD 270 >gi|227828214|ref|YP_002829994.1| porphobilinogen deaminase [Sulfolobus islandicus M.14.25] gi|229585443|ref|YP_002843945.1| porphobilinogen deaminase [Sulfolobus islandicus M.16.27] gi|259646265|sp|C3MZR8|HEM3_SULIA RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|259709751|sp|C3MYD9|HEM3_SULIM RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|227460010|gb|ACP38696.1| porphobilinogen deaminase [Sulfolobus islandicus M.14.25] gi|228020493|gb|ACP55900.1| porphobilinogen deaminase [Sulfolobus islandicus M.16.27] Length = 293 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 83/232 (35%), Positives = 127/232 (54%), Gaps = 6/232 (2%) Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99 II + TK D + L+++G KG+F +E+ + ++ G+ D AVHS KD+ +++ L+I A Sbjct: 33 IIDIKTKADLFSTEPLSKLG-KGVFEKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFA 91 Query: 100 YLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159 L R+ D+ I+ ++L L + IGTSS+RRK L + +I+ D RG ++TR+ Sbjct: 92 VLERDPPYDILIAE--KNLDKLDSNITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIR 149 Query: 160 KLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219 K + + ++LA A +KRL LN+ DF P QG I + K +E+ K Sbjct: 150 KYLSKEYQGLILAEASLKRLNMTMNYHR-LNVYDFTPEANQGIIVALGRKKDEKIKEIFK 208 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 INH+DT D ERA ++ + G C S I +G FYGI SDGK Sbjct: 209 EINHKDTLDEALAERAVISLVGGGCHSPIGVLFKKEGKE--FYGIASYSDGK 258 >gi|227830973|ref|YP_002832753.1| porphobilinogen deaminase [Sulfolobus islandicus L.S.2.15] gi|238620405|ref|YP_002915231.1| porphobilinogen deaminase [Sulfolobus islandicus M.16.4] gi|284998461|ref|YP_003420229.1| porphobilinogen deaminase [Sulfolobus islandicus L.D.8.5] gi|259709727|sp|C4KIZ9|HEM3_SULIK RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|259709750|sp|C3MJ21|HEM3_SULIL RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|227457421|gb|ACP36108.1| porphobilinogen deaminase [Sulfolobus islandicus L.S.2.15] gi|238381475|gb|ACR42563.1| porphobilinogen deaminase [Sulfolobus islandicus M.16.4] gi|284446357|gb|ADB87859.1| porphobilinogen deaminase [Sulfolobus islandicus L.D.8.5] Length = 293 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 86/244 (35%), Positives = 133/244 (54%), Gaps = 8/244 (3%) Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99 II + TK D + L+++G KG+F +E+ + ++ G+ D AVHS KD+ +++ L+I A Sbjct: 33 IIDIKTKADLFSTEPLSKLG-KGVFEKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFA 91 Query: 100 YLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159 L R+ D+ I+ ++L L + IGTSS+RRK L + +I+ D RG ++TR+ Sbjct: 92 VLERDPPYDILIAE--KNLDKLDSNITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIR 149 Query: 160 KLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219 K + + ++LA A +KRL LN+ DF P QG I + K +E+ K Sbjct: 150 KYLSKEYQGLILAEASLKRLNMTMNYHR-LNVYDFTPEANQGIIVALGRKKDEKIKEIFK 208 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG--KIFHEVS 277 INH+DT D ERA ++ + G C S I +G FYGI SDG KI +S Sbjct: 209 EINHKDTLDEALAERAVISLVGGGCHSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS 266 Query: 278 RNGN 281 + G+ Sbjct: 267 KPGD 270 >gi|119478980|ref|XP_001259519.1| hydroxymethylbilane synthase, putative [Neosartorya fischeri NRRL 181] gi|119407673|gb|EAW17622.1| hydroxymethylbilane synthase, putative [Neosartorya fischeri NRRL 181] Length = 341 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 95/291 (32%), Positives = 149/291 (51%), Gaps = 14/291 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++ F IGTR S LAL ++L P + I T GD+ T L E K Sbjct: 16 RRTFTIGTRKSKLALMQTDLVVAALK--KSWPEYTFQIHSQETAGDKNTVIALREFTTKN 73 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 L+T+E+E+ L++G++D VHS KD+PT+L + + RED RDV + + Sbjct: 74 LWTQELEELLMAGDVDLIVHSLKDVPTQLPPSCTLGPMMEREDTRDVLVMKKGLPNMAFS 133 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177 ++ SV+GTSS+RR A L R + V D RG I TRL KL+ + I+LA AG+ Sbjct: 134 EMPAGSVVGTSSIRRTAQLARRYPHLKVQDVRGNIGTRLAKLDAEDSPFTCIILAAAGLL 193 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 RL E I + L+ ++ + GQGA+ +E ++ ++++ I H +T + ER+ Sbjct: 194 RLGLEDRISQYLDSKNGGMLYAVGQGALGVEIRKDDKLLRDMLSSIGHHETTMACLAERS 253 Query: 236 FLAELDGSCKSAIA----GFAYCKGST-LYFYGIVLASDGKIFHEVSRNGN 281 L L+G C + + GS+ L IV++ DG+ EV +G+ Sbjct: 254 LLRTLEGGCSAPLGVETEWVQDSDGSSKLRMRAIVVSVDGRESAEVEVDGS 304 >gi|221059912|ref|XP_002260601.1| Porphobilinogen deaminase [Plasmodium knowlesi strain H] gi|193810675|emb|CAQ42573.1| Porphobilinogen deaminase, putative [Plasmodium knowlesi strain H] Length = 449 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 92/333 (27%), Positives = 153/333 (45%), Gaps = 71/333 (21%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVII--PLSTKGDRITNRTLTEIGGK 61 K IGTR SPLA+ + + R+ L K N+ I + T GD I ++ + GGK Sbjct: 65 KEIIIGTRDSPLAIKQSEKVRTKLEAYFKKVNKNVKITLKSIKTMGDNILDQKVDLFGGK 124 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT+E++++LI G++ VHS KD+P +L + +Q+S +L R+ I D F+S +L+D+ Sbjct: 125 GIFTKELDEELIKGKVHICVHSLKDVPMELPEQVQLSCFLKRDTINDAFLSVKYGTLEDM 184 Query: 122 ALHSV---------------------------------------IGTSSLRRKALLLRWR 142 + IGTSSLRR + + Sbjct: 185 NKMKMANKMEEGSYQPKGMSQRVINQNVKRDNYEGDHYDNFIPTIGTSSLRRSSQIKYKY 244 Query: 143 SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI-------------- 188 +++V + RG I TR+ KL N + AI++A G++RL +K I+ I Sbjct: 245 KNVAVKNMRGNINTRIAKLCNGQYDAIIIAKCGLERLTTKKGIRNIIGGKNKVTPKNFLI 304 Query: 189 ----------------LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 +N P+ QG I + +H ++ +++K IN E N Sbjct: 305 NYNNTEINLTSLHIQQINKRTIYPALCQGIIAVSSHKSDKYISDVLKNINDEKAQIMANI 364 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIV 265 ER+FL +++G+C I G+A + F ++ Sbjct: 365 ERSFLYQIEGNCMMPIGGYAKIVNGEIVFNAVI 397 >gi|330946190|ref|XP_003306713.1| hypothetical protein PTT_19919 [Pyrenophora teres f. teres 0-1] gi|311315692|gb|EFQ85212.1| hypothetical protein PTT_19919 [Pyrenophora teres f. teres 0-1] Length = 398 Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 98/277 (35%), Positives = 135/277 (48%), Gaps = 14/277 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG----G 60 P IGTR S LA A SL D + P I P+ +GDR L ++ Sbjct: 30 PVNIGTRNSVLAQIQARAVERSLKDAY--PERTYNICPVVVQGDRDKITPLQQLSQGENA 87 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT----AQ 116 K L+T E+E L SG++D VH KDMPT+L L++ A L RED RD + Sbjct: 88 KSLWTGELESMLESGDLDIIVHCLKDMPTQLPDHLELGAILEREDPRDALLVSPRLPKET 147 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYA 174 +L L ++IGTSS+RR A L + + D RG + TRL KL+ ++ AI+LA A Sbjct: 148 TLATLPQGAIIGTSSVRRAATLRKLYPHLKFADLRGNVGTRLGKLDAEDSPYSAIILAAA 207 Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 G+KR+ + I + L+ + GQGA+ IE N+ +EL+ I E T + + Sbjct: 208 GLKRMGLDNRITQYLSSTSGGMLHAVGQGALGIEIRKNDDAMKELMSKIRCERTTRACSA 267 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269 ERA L L+G C I KG G A D Sbjct: 268 ERALLRTLEGGCSVPIGVETSWKGGKGLAVGPQPAKD 304 >gi|323475281|gb|ADX85887.1| porphobilinogen deaminase [Sulfolobus islandicus REY15A] gi|323478006|gb|ADX83244.1| porphobilinogen deaminase [Sulfolobus islandicus HVE10/4] Length = 293 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 83/232 (35%), Positives = 127/232 (54%), Gaps = 6/232 (2%) Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99 II + TK D + L+++G KG+F +E+ + ++ G+ D AVHS KD+ +++ L+I A Sbjct: 33 IINIKTKADLFSTEPLSKLG-KGVFEKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFA 91 Query: 100 YLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159 L R+ D+ I+ ++L L + IGTSS+RRK L + +I+ D RG ++TR+ Sbjct: 92 VLERDPPYDILIAE--KNLDKLDSNITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIR 149 Query: 160 KLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219 K + + ++LA A +KRL LN+ DF P QG I + K +E+ K Sbjct: 150 KYLSKEYQGLILAEASLKRLNMTMNYHR-LNVYDFTPEANQGIIVALGRKKDEKIKEIFK 208 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 INH+DT D ERA ++ + G C S I +G FYGI SDGK Sbjct: 209 EINHKDTLDEALAERAVISLVGGGCHSPIGVLFKKEGKE--FYGIASYSDGK 258 >gi|301630715|ref|XP_002944462.1| PREDICTED: porphobilinogen deaminase-like, partial [Xenopus (Silurana) tropicalis] Length = 291 Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 82/217 (37%), Positives = 112/217 (51%), Gaps = 4/217 (1%) Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT--- 114 IG K LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H Sbjct: 1 IGEKSLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPYDAVVFHPKRY 60 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAY 173 +L L SVIGTSSLRR A L + + D RG + TR+ KL+ + AI+LA Sbjct: 61 GNTLSTLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRMKKLDEKEDFSAIILAA 120 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG++R+ E I +IL ++ + GQGA+ IE + +V + +T E Sbjct: 121 AGLRRMGWENRIGQILTSDECLYAVGQGALAIEVRAKDQDILSMVSALQDPETVLRCIAE 180 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 RAF+ L+G C +A K S LY G V + DG Sbjct: 181 RAFMKRLEGGCSVPVAVNTVVKDSQLYLTGAVYSLDG 217 >gi|190345502|gb|EDK37399.2| hypothetical protein PGUG_01497 [Meyerozyma guilliermondii ATCC 6260] Length = 371 Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 95/286 (33%), Positives = 150/286 (52%), Gaps = 18/286 (6%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +IG R S LA+A + + L V K P I+ LST GD+I ++ L GGK L Sbjct: 10 KHIQIGGRKSTLAVAQSNIVKKHL--VAKFPQLKCSILALSTLGDQIQSQPLYSFGGKAL 67 Query: 64 FTEEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--- 115 +T+E+E L+ ++D VHS KD+PT L + ++ L R D RDV + Sbjct: 68 WTKELETLLMQAIGGLPQLDMIVHSLKDVPTNLPEEFELGCILDRSDPRDVLVMRKGSKY 127 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAY 173 +SL +L +++GTSS+RR + L++ + RG I TR+ KL+ ++ +LLA Sbjct: 128 KSLAELPAGTMVGTSSVRRSSQLMKNYPHLRFDSARGNINTRVQKLDAEDSPFECLLLAA 187 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC- 232 AG++R+ + I L+ D + GQGA+ +E + + ++L++ I ED S+ C Sbjct: 188 AGLQRVGLDHRITTYLDAPDMYYAVGQGALGVEIRKGDEQIKQLLQAI--EDVPTSLCCH 245 Query: 233 -ERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHE 275 ER+ + L+G C I +T L F IV++ DG F E Sbjct: 246 AERSLMRYLEGGCSVPIGVHTDYDKTTQVLKFNAIVVSPDGNEFVE 291 >gi|229579851|ref|YP_002838250.1| porphobilinogen deaminase [Sulfolobus islandicus Y.G.57.14] gi|259709753|sp|C3N841|HEM3_SULIY RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|228010566|gb|ACP46328.1| porphobilinogen deaminase [Sulfolobus islandicus Y.G.57.14] Length = 293 Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 86/244 (35%), Positives = 133/244 (54%), Gaps = 8/244 (3%) Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99 II + TK D + L+++G KG+F +E+ + ++ G+ D AVHS KD+ +++ L+I A Sbjct: 33 IIDIKTKADLFSTDPLSKLG-KGVFEKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFA 91 Query: 100 YLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159 L R+ D+ I+ ++L L + IGTSS+RRK L + +I+ D RG ++TR+ Sbjct: 92 VLERDPPYDILIAE--KNLDKLDSNITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIR 149 Query: 160 KLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219 K + + ++LA A +KRL LN+ DF P QG I + K +E+ K Sbjct: 150 KYLSKEYQGLILAEASLKRLNMTMNYHR-LNVYDFTPEANQGIIVALGRKKDEKIKEIFK 208 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG--KIFHEVS 277 INH+DT D ERA ++ + G C S I +G FYGI SDG KI +S Sbjct: 209 EINHKDTLDEALAERAVISLVGGGCHSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS 266 Query: 278 RNGN 281 + G+ Sbjct: 267 KPGD 270 >gi|226478112|emb|CAX72749.1| hydroxymethylbilane synthase [Schistosoma japonicum] Length = 413 Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 150/288 (52%), Gaps = 29/288 (10%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-IIPLSTKGDRITNRTLTEIGGKGLFT 65 R+G+R S LAL E SL+ V K PH + ++ ++T GD I + L++IG K LFT Sbjct: 11 RVGSRRSNLALLQT-EMAISLLKVQK--PHIMFEVVEIATVGDEILDVPLSKIGDKSLFT 67 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSLKDLA 122 +E+EK L+ GE+D VHS KD+P+ L GL + R DV + + L DL Sbjct: 68 KELEKSLLVGEVDLVVHSLKDVPSVLPTGLVLGCVFGRSSPEDVVLMAPHNRGMKLSDLP 127 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-----------NKA---HA 168 + + +GTSS+RR A L+R + I RG + TRL KL+ N++ A Sbjct: 128 VGATVGTSSIRRVATLIRKYPHLKFISIRGNLNTRLAKLDTPSNLQKQCCTGNQSLSYDA 187 Query: 169 ILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD 228 ++LA AG++R+ I ++L+ + S QGA+ E NN +L+ +I+ E + Sbjct: 188 LILAKAGVERMGWVDRIDQVLSDSFYAVS--QGALACECLQNNTFIMDLLSLIHDESSAL 245 Query: 229 SVNCERAFLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDG 270 + ER+ + +LDG C I+ + K S L + +L+ DG Sbjct: 246 TAIAERSLMHQLDGGCSIPISVRSDLTLKEDFKSSKLTLHANILSVDG 293 >gi|307595857|ref|YP_003902174.1| porphobilinogen deaminase [Vulcanisaeta distributa DSM 14429] gi|307551058|gb|ADN51123.1| porphobilinogen deaminase [Vulcanisaeta distributa DSM 14429] Length = 304 Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 93/296 (31%), Positives = 153/296 (51%), Gaps = 10/296 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR S L+L +T + + ++ P+ +I + T GD I ++ L IG KG+F Sbjct: 3 IRIATRGSRLSL---IQTEIVMNMIRRVEPNVRFDVIIVRTTGDVIQDKPLYAIGVKGIF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ L+ E D AVHS KD+P+++ GL ++ + PR+ DV + + +AL Sbjct: 60 EKEVNLALLRNEADIAVHSLKDLPSEISPGLVVAGFSPRDPPFDVLVVKDDYPSELMALP 119 Query: 125 S--VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--- 179 S +GTSS+RR+A LL R DIS+ RG ++TR+NKL AI++A AG+ RL Sbjct: 120 SGARVGTSSVRRRAFLLNVRRDISINVIRGNVDTRINKLIRGDYDAIVIAEAGLVRLIND 179 Query: 180 -KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 K + ++ + PP+PGQG I + + +L+ + ERAFL Sbjct: 180 VKSLNIKYTRISPDVLPPAPGQGIIAVVAREKDTDLVDLLNKASDPKARAEALAERAFLR 239 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 + G C + G A +G+ + F + +G+ V +G+ + +G +AA+ Sbjct: 240 TIGGGCHVPVGGMAIHEGARMEFIAGMADLNGERKVLVKLSGSPSNPEELGVNAAR 295 >gi|213616301|ref|ZP_03372127.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 168 Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 68/156 (43%), Positives = 93/156 (59%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P Sbjct: 5 PGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVHSMKDVPVAFPD 64 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL DL S++GTSSLRR+ L R D+ + RG Sbjct: 65 GLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEIL 189 + TRL KL+N AI+LA AG+KRL E I+ L Sbjct: 125 VGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTAL 160 >gi|39934577|ref|NP_946853.1| porphobilinogen deaminase [Rhodopseudomonas palustris CGA009] gi|39648426|emb|CAE26947.1| putative porphobilinogen deaminase [Rhodopseudomonas palustris CGA009] Length = 327 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 148/309 (47%), Gaps = 22/309 (7%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSL-MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M K P RIGTR S +ALA + L ++ P II T GD L G Sbjct: 1 MVKFPVRIGTRKSVMALAQTEDIAKQLSAAASELDPQ---IIKFETVGDSDQISKLLPHG 57 Query: 60 GKG-LFTEEIEKKLISGEIDCAVHSAKDMPT-KLLKGLQISAYLPREDIRDVFISHTAQS 117 GKG F EI ++ GE+ CA+HS KDMP + GL ++A L R+ D + + Sbjct: 58 GKGGAFVAEIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPACDSLVLRKGLT 117 Query: 118 LKDLALHS----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-------- 165 L++L IGT+++RR A R ++ VI FRG ++R+ KL+N + Sbjct: 118 LEELKKSRGKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADSRMRKLDNREKQRMPDGS 177 Query: 166 ----AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221 A A+++A AGI+R+ I E+ P+ GQG + +E V+ K ++ + +I Sbjct: 178 EVGPADALIMARAGIERVGFVDRIAHDFTPEEMLPAAGQGIVAVECPVHEWKTRQYLALI 237 Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281 ++ + + ER L L+G C S IA + G + VL +G +F E +R G Sbjct: 238 DNHQSRLCCDAEREVLWVLNGHCNSPIAAHSVITGDEMTLRASVLDLEGGMFIEAARTGP 297 Query: 282 RCDAINIGR 290 +GR Sbjct: 298 ANRPRELGR 306 >gi|154298906|ref|XP_001549874.1| hypothetical protein BC1G_11700 [Botryotinia fuckeliana B05.10] gi|150857605|gb|EDN32797.1| hypothetical protein BC1G_11700 [Botryotinia fuckeliana B05.10] Length = 379 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 151/306 (49%), Gaps = 20/306 (6%) Query: 3 KKP--FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIG 59 +KP IGTR S LA+ + +++L H PH N I L T GD+ L + G Sbjct: 48 EKPATIHIGTRKSALAMVQTEQVKAALEKAH---PHLNFEITKLETMGDKNQVTALHDFG 104 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---Q 116 K L+T E+E L+ ++D VH KDMPT+L I A L RED RD I + Sbjct: 105 AKSLWTHELEALLLDRKLDIVVHCLKDMPTQLPSKCIIGAILEREDPRDALIMKAGSNYK 164 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYA 174 SL +L SV+GTSS+RR A + R ++ + RG I TRLNKL ++ K ++LA A Sbjct: 165 SLSELPAGSVVGTSSVRRSAQIARKYPELKFENARGNIGTRLNKLDADDGKYSCLILAAA 224 Query: 175 GIKRLKKEKVIKEILNIE----DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 G+ R+ + I + L+ + + GQGA+ +E + + ++ + HE T + Sbjct: 225 GLLRMGWGERITQYLDSKTEGGGMLHAVGQGALALEVRDGDEEIGTMISALQHEPTQLAG 284 Query: 231 NCERAFLAELDGSCKSAIA-GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 ER+ + L+G C I + + L IV++ DG S R + I Sbjct: 285 LAERSLMRTLEGGCSVPIGVETTWIEKGKLLMKAIVVSLDGT----ESVESERLEEILTP 340 Query: 290 RDAAQY 295 +DA ++ Sbjct: 341 KDADEF 346 >gi|15668749|ref|NP_247548.1| porphobilinogen deaminase [Methanocaldococcus jannaschii DSM 2661] gi|2495178|sp|Q57989|HEM3_METJA RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|1591276|gb|AAB98563.1| porphobilinogen deaminase (hemC) [Methanocaldococcus jannaschii DSM 2661] Length = 292 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 135/258 (52%), Gaps = 29/258 (11%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + + ++ K + + I + T GDR+ ++ L++IG G+FT Sbjct: 2 IRIGTRGSKLALYQA----NKVAELLKNLGYKVEIKIIKTTGDRVLDKKLSDIG-IGVFT 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ +++ EID AVHS KD+PT + L + A L R+ D+ I + KD+ + Sbjct: 57 KELDLAMLNNEIDIAVHSLKDIPTIWNENLMVGAVLERDSYHDLLIWN-----KDIDFNE 111 Query: 126 ----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 VIGTSS+RR+A L + RG ++TRL KL AI+L+ AGI RL Sbjct: 112 DSKIVIGTSSMRRRAFLKFIYPNAKFELLRGNVDTRLRKLKEGLYDAIVLSEAGIIRLG- 170 Query: 182 EKVIKEILNIEDFP-------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 +++EDF P+P QG I + ++ + + ++K INHE T+ CER Sbjct: 171 -------VSLEDFNYKRLDILPAPAQGIIAVACKRDDEEMKSILKEINHERTYLESLCER 223 Query: 235 AFLAELDGSCKSAIAGFA 252 L E G C A Sbjct: 224 TALNEFGGGCSVPFGALA 241 >gi|256425452|ref|YP_003126105.1| porphobilinogen deaminase [Chitinophaga pinensis DSM 2588] gi|256040360|gb|ACU63904.1| porphobilinogen deaminase [Chitinophaga pinensis DSM 2588] Length = 307 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 90/294 (30%), Positives = 147/294 (50%), Gaps = 7/294 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +IGTR S LAL A + + L + ++ V++P+ ++GD L EIG +G+ Sbjct: 3 REIKIGTRDSQLALWQANKVKGLL----EAQGYSTVLVPIKSEGDIDLVTPLYEIGVQGI 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKDLA 122 FT+ ++ L++G ID AVHS KD+PT+L K + +A L R ++D+ + + L Sbjct: 59 FTKSLDIALLNGRIDIAVHSLKDVPTQLPKNIIQAAVLERGPVKDLLVYRQDTAFLGQPE 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + I TSS+RRKA LR + + RG + TRL KL + A AG++R+ Sbjct: 119 YIANIATSSVRRKAQWLRKYPKHQLHNLRGNVNTRLQKLAAENWDGAIFAAAGLERIGVR 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + ++ P+P QGA+ ++ ++ N T ER FL L G Sbjct: 179 PATS--IELDWMLPAPAQGAVVAVCREDDDFCRQACAPFNDLATALCTRVERDFLRTLMG 236 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C + I+ +A T++F G + + DG+ ++ DA IGR AA+ I Sbjct: 237 GCTTPISAYATISNETVHFSGELCSLDGQQLFTITEQLPLQDAGVIGRSAAEKI 290 >gi|310794330|gb|EFQ29791.1| porphobilinogen deaminase [Glomerella graminicola M1.001] Length = 347 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 93/259 (35%), Positives = 127/259 (49%), Gaps = 13/259 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E +GTR S LA+ A L P + I + T GD+ L GGK Sbjct: 9 ESGVIHVGTRKSALAMKQAEIVVEGLSKAR--PDVSFEIHGMQTLGDKDQITALYNFGGK 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-------SHT 114 GL+T E+E KL + EID VHS KDMPT L G + RED RDV + H Sbjct: 67 GLWTSELEAKLAAKEIDIIVHSLKDMPTTLPDGCTLGCVTKREDPRDVVVFKAGLAEKHG 126 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLA 172 ++L DL SVIGTSS+RR A L R + D RG IETRL K ++ + AI+LA Sbjct: 127 WKTLADLPEGSVIGTSSVRRIAQLKRRYPGLKFADVRGNIETRLRKCDDPEGPFSAIILA 186 Query: 173 YAGIKRLKKEKVIKEILNIEDFPP--SPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 AG+ R+ I + L E+ + GQGA+ IE + + ++K + + T + Sbjct: 187 AAGLLRMDYGARISQFLESENSGTLHAVGQGALGIEARTGDERVLAVIKELEDKPTMLAC 246 Query: 231 NCERAFLAELDGSCKSAIA 249 ER+ + L+G C I Sbjct: 247 FAERSVMRTLEGGCSVPIG 265 >gi|282857646|ref|ZP_06266861.1| hydroxymethylbilane synthase [Pyramidobacter piscolens W5455] gi|282584522|gb|EFB89875.1| hydroxymethylbilane synthase [Pyramidobacter piscolens W5455] Length = 245 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 83/251 (33%), Positives = 129/251 (51%), Gaps = 13/251 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE----IG 59 K R G+R S LALA ++ H P + + ++P++T+GD + + +E G Sbjct: 2 KTLRFGSRTSDLALAQTRLVMDAVGRAH--PEYRLELVPIATRGD-VDMKPFSEASDTFG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF-ISHTAQSL 118 KGLFT E+E+ L+ G ID AVHS KD+P + L + A R D RDV + A+++ Sbjct: 59 IKGLFTRELEEALLDGSIDVAVHSLKDLPAVQDERLPLLACFRRGDPRDVLALPAGAEAM 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 ++IG SS RR+ L V RG + TRL KL+ + A++LA AG++R Sbjct: 119 N----GALIGCSSARRRLQALDLFEGAEVRPVRGNVGTRLRKLDEGQFSALILAAAGLER 174 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + ++++ P+PGQG + + + K ++ + I D D ERAF A Sbjct: 175 LGLRARVSRYFSLDEIVPAPGQGILACQGRAGD-KNEDWLDAIFDPDATDCARAERAFSA 233 Query: 239 ELDGSCKSAIA 249 L G C S + Sbjct: 234 ALGGGCASPVG 244 >gi|297567358|ref|YP_003686330.1| porphobilinogen deaminase [Meiothermus silvanus DSM 9946] gi|296851807|gb|ADH64822.1| porphobilinogen deaminase [Meiothermus silvanus DSM 9946] Length = 304 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 86/268 (32%), Positives = 143/268 (53%), Gaps = 15/268 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LA A + L D +VI+ T+GDR +++ G+G FT Sbjct: 4 VRIATRGSRLARWQAEWVAAQLQDQGIA--STLVIV--ETQGDR-ERVAFSQMQGQGFFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI----SHTAQSLK-D 120 + ++ + G D AVHS KD+P+ GL ++A RED R+ + + AQ+ Sbjct: 59 KAVQDAVREGRADLAVHSLKDLPSAPTPGLVLAAIPIREDPREALLVLPSAWDAQAPALP 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LA + +G+S++RR+A L + R D+ +++ RG + TR+ KL + AILLA+AG+KRL Sbjct: 119 LAPGARVGSSAVRRQAQLAQLRPDLKLLELRGNVPTRVEKLQSGGYEAILLAWAGLKRLG 178 Query: 181 KE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + +L +F P+PGQGA+ +E + + + +++ ++ +V ER +A Sbjct: 179 LDLGGLAVRLLEPREFVPAPGQGALALECREEDTQLRGVLQGLDDPTARLTVGIERGLMA 238 Query: 239 ELDGSCKSAIAGFAY-CKGS--TLYFYG 263 L G C+ A+ A +G L +YG Sbjct: 239 RLQGGCQLALGASAQRVQGGWQLLAWYG 266 >gi|15920398|ref|NP_376067.1| porphobilinogen deaminase [Sulfolobus tokodaii str. 7] gi|25453026|sp|Q976H1|HEM3_SULTO RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|15621180|dbj|BAB65176.1| 294aa long hypothetical porphobilinogen deaminase [Sulfolobus tokodaii str. 7] Length = 294 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 90/265 (33%), Positives = 142/265 (53%), Gaps = 10/265 (3%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 RI R S L+ + L HK+ I + TK D N L+++G KG+F + Sbjct: 4 RIAARGSKLSRIQVMMVENYL---HKLGIET-EFIEIKTKADLFQNEPLSKLG-KGVFEK 58 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 E+ + ++ + D AVHS KD+ T++ + L+I A LPR+ D+ IS ++L +L +S+ Sbjct: 59 EVNQAVLDNKADVAVHSMKDILTEISENLEIYAVLPRDPPFDILISR--KNLFNLEPNSI 116 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGTSS+RRK L +R+D+++ D RG I+TRL K + I++A A I RL KE+V Sbjct: 117 IGTSSIRRKNFLTFYRNDLNIKDLRGNIDTRLKKYFEGQYDGIIIAEASIYRL-KEQVQY 175 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ F P QG I + + +++ IN +DT + ER L+ + G C S Sbjct: 176 YRLDPHLFTPEANQGIIVVIGRKKDETIKKIFNEINDKDTLEIAIAERKALSIVGGGCHS 235 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGK 271 I Y + F+GI+ +S G+ Sbjct: 236 PIG--VYFEKYDKDFHGIISSSFGR 258 >gi|189200240|ref|XP_001936457.1| porphobilinogen deaminase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187983556|gb|EDU49044.1| porphobilinogen deaminase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 399 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 98/277 (35%), Positives = 134/277 (48%), Gaps = 14/277 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG----G 60 P IGTR S LA A SL D + P I P+ +GDR L ++ Sbjct: 30 PVNIGTRNSVLAQIQARAVERSLKDAY--PERTYNICPVIVQGDRDKITPLQQLSQGENA 87 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT----AQ 116 K L+T E+E L SG++D VH KDMPT+L L++ A L RED RD + Sbjct: 88 KSLWTGELESMLESGDLDIIVHCLKDMPTQLPDHLELGAILEREDPRDALLVSPRLPKET 147 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYA 174 +L L + IGTSS+RR A L + + D RG + TRL KL+ ++ AI+LA A Sbjct: 148 TLATLPQGATIGTSSVRRAATLRKLYPHLKFADLRGNVGTRLAKLDAEDSPYSAIILAAA 207 Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 G+KR+ + I + L+ + GQGA+ IE N+ +EL+ I E T + + Sbjct: 208 GLKRMGLDNRITQYLSSTSGGMLHAVGQGALGIEIRKNDEAMKELMSKIRCERTTRACSA 267 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269 ERA L L+G C I KG G A D Sbjct: 268 ERALLRTLEGGCSVPIGVETSWKGGKGLSVGPQPAKD 304 >gi|297170423|gb|ADI21455.1| porphobilinogen deaminase [uncultured gamma proteobacterium HF0070_10G19] Length = 302 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 83/260 (31%), Positives = 137/260 (52%), Gaps = 8/260 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI R SPLA+ A + ++ + +IP+ + GD +T++ L++IGGKGLF Sbjct: 3 IRIACRKSPLAVLQANKFIEAIQKKYG-KEIKCRLIPMHSAGD-LTDKDLSQIGGKGLFI 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI--SHTAQSLKDLAL 123 E+E L S D AVHS KD+P KL G +I + L R + DV I + ++DL Sbjct: 61 SELESALASDNADVAVHSLKDVPAKLNDGFEIISCLERGNPNDVIILKQNGPSVIQDLNN 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 HS I TSS RRKA + + RG I TR++K + +L+A ++RL ++ Sbjct: 121 HSKIATSSPRRKAQWKIYNPTFEFVPIRGNISTRISKFLESDLDGLLMAATALERLNIQE 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVN--NPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + N +D PS QG I +E ++ + + +++++ +NH++++++ ER + LD Sbjct: 181 HHYDEFNYQDVVPSVCQGIIGMEIYLGTISQEKRQIIQSVNHQNSFNAALMEREIIKSLD 240 Query: 242 GSCKSAIAGFAYCKGSTLYF 261 C S I C+ +Y Sbjct: 241 ADCMSPIG--VICRDKMIYL 258 >gi|192290090|ref|YP_001990695.1| porphobilinogen deaminase [Rhodopseudomonas palustris TIE-1] gi|192283839|gb|ACF00220.1| porphobilinogen deaminase [Rhodopseudomonas palustris TIE-1] Length = 326 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 96/307 (31%), Positives = 147/307 (47%), Gaps = 22/307 (7%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSL-MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K P RIGTR S +ALA + L ++ P II T GD L GGK Sbjct: 2 KFPVRIGTRKSVMALAQTEDIAKQLSAAASELDPQ---IIKFETVGDSDQISKLLPHGGK 58 Query: 62 G-LFTEEIEKKLISGEIDCAVHSAKDMPT-KLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G F EI ++ GE+ CA+HS KDMP + GL ++A L R+ D + +L+ Sbjct: 59 GGAFVAEIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPACDSLVLRKGLTLE 118 Query: 120 DLALHS----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK---------- 165 +L IGT+++RR A R ++ VI FRG ++R+ KL+N + Sbjct: 119 ELKKSRGKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADSRMRKLDNREKQRMPDGSEV 178 Query: 166 --AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223 A A+++A AGI+R+ I E+ P+ GQG + +E V+ K ++ + +I++ Sbjct: 179 GPADALIMARAGIERVGFVDRIAHDFTPEEMLPAAGQGIVAVECPVHEWKTRQYLALIDN 238 Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283 + + ER L L+G C S IA + G + VL +G +F E +R G Sbjct: 239 HQSRLCCDAEREVLWVLNGHCNSPIAAHSVITGDEMTLRASVLDLEGGMFIEAARTGPAN 298 Query: 284 DAINIGR 290 +GR Sbjct: 299 RPRELGR 305 >gi|227538630|ref|ZP_03968679.1| porphobilinogen deaminase [Sphingobacterium spiritivorum ATCC 33300] gi|227241549|gb|EEI91564.1| porphobilinogen deaminase [Sphingobacterium spiritivorum ATCC 33300] Length = 528 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 89/262 (33%), Positives = 139/262 (53%), Gaps = 24/262 (9%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LA+ A + L ++ T+GD I + L ++ GKG FT+E Sbjct: 7 IGTRGSQLAMWQANHIKDRLAAAGIDSELKVI----KTQGDIIQHLRLDKLEGKGFFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD------- 120 +E++L+S ID AVHS KD+PT GL I+A RE ++ I LKD Sbjct: 63 LEEELLSSTIDLAVHSHKDLPTVNPPGLIIAAVSERESPAELLI-----VLKDCVDIKKR 117 Query: 121 --LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L ++ +GTSS RRKA LL R D+ D RG ++TR+ KL + AI+LA AG++R Sbjct: 118 LSLKHNATVGTSSNRRKAQLLSLRPDLEFDDLRGNLQTRIQKLRDENYDAIILAKAGVER 177 Query: 179 LK---KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + + ++EI +E P+P QG + I+ ++ + E ++VI++++ + + ER Sbjct: 178 IDMDLSDFYVEEIPPVE-LIPAPAQGVLAIQIRESDQELFEALQVIHNKEVAEVIAVERK 236 Query: 236 FLAELDGSCKSAIAGFAYCKGS 257 L D C + + YC+ S Sbjct: 237 VLNLFDAGCHAPLG--CYCRKS 256 >gi|269958021|ref|YP_003327810.1| porphobilinogen deaminase [Xylanimonas cellulosilytica DSM 15894] gi|269306702|gb|ACZ32252.1| porphobilinogen deaminase [Xylanimonas cellulosilytica DSM 15894] Length = 343 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 92/283 (32%), Positives = 137/283 (48%), Gaps = 17/283 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA + L ++ P + ++ + T GD +T +L +GG G+F Sbjct: 7 PLRLGTRASLLATTQSGLVAKRLEELTGRP---VELVHIRTDGDVLTG-SLASLGGTGVF 62 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLAL 123 + + L+ D AVHS KD+PT ++GL P RED RD + +L L Sbjct: 63 VAALREALLDDRCDVAVHSLKDLPTAAVEGLTF--VTPEREDPRDALCARDGLTLDTLPR 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLKK 181 + IGT S RR A L R D+ V+D RG ++TRL + A A++LA +G+ RL + Sbjct: 121 GARIGTGSPRRAAQLRAARPDLDVVDIRGNVDTRLKRALGPDADLDAVVLACSGLARLGR 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNN-----PKAQELVKVINHEDTWDSVNCERAF 236 + + L+ P+PGQGA+ +E + P A ++H T SV ERA Sbjct: 181 TDTVTQALDPAVVAPAPGQGALAVEARTTDLAPGGPLAAAFA-ALDHRATRLSVTAERAV 239 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG--KIFHEVS 277 LA L+ C + + A L +V DG K+ H S Sbjct: 240 LARLEAGCAAPVGALARVDEGQLTLTAVVARVDGTEKLRHRAS 282 >gi|187734604|ref|YP_001876716.1| porphobilinogen deaminase [Akkermansia muciniphila ATCC BAA-835] gi|187424656|gb|ACD03935.1| porphobilinogen deaminase [Akkermansia muciniphila ATCC BAA-835] Length = 325 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 89/272 (32%), Positives = 140/272 (51%), Gaps = 25/272 (9%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG------GK 61 IGTR S LALA A R++L + P ++ + T GDR T+ L ++ K Sbjct: 9 IGTRGSALALAQADMVRAALS--LRYPELDVRCEIIHTIGDRRTDVPLADVARVSGMVDK 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F +E+E L G ID AVHS KD+P++L G ++A LPR + DV I+ D Sbjct: 67 GIFIKELETALRDGRIDVAVHSLKDVPSELAAGFTLAAVLPRAAVEDVLITKE----PDW 122 Query: 122 ALHSVIGTSSLRRKALLLR--WRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKR 178 + T S+RR+ L+ R W S + + RG + TRL KL + A++LA AG++R Sbjct: 123 NGSGTLATGSVRRR-LMARTYWGSGLRFENLRGNVPTRLGKLVEHPGWDAVILARAGLER 181 Query: 179 L---------KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 L + K+ L +E F P+ GQG + +E ++ + E+++ IN +++ Sbjct: 182 LGLYAPETLVEGRKLYMRPLPVEVFIPAVGQGIVGMECRSSDRETAEMLEGINDPESFAC 241 Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTLYF 261 ERAFL L +C + + +A+ G L Sbjct: 242 ALAERAFLVRLGANCSTPVGVYAHPDGEELVL 273 >gi|118431819|ref|NP_148522.2| hydroxymethylbilane synthase [Aeropyrum pernix K1] gi|152031618|sp|Q9Y9J0|HEM3_AERPE RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|116063141|dbj|BAA81310.2| hydroxymethylbilane synthase [Aeropyrum pernix K1] Length = 307 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 91/284 (32%), Positives = 138/284 (48%), Gaps = 9/284 (3%) Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 G+R S L + A E S V + ++ + + GD ++R L IG G+FT E+ Sbjct: 9 GSRLSLLQVEQALEELSRYAGVS----MHWEVVRVKSAGDVWSDRPLESIGVVGVFTREV 64 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKG-LQISAYLPREDIRDVFISHTAQS-LKDLALHSV 126 ++ + SG D AVHS KDMPT G L+I R RD IS ++DL S Sbjct: 65 DRAVASGAADIAVHSLKDMPTSGYGGPLKIVYIASRPSARDALISRQGPGRVEDLEPGST 124 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSS RR+AL L + I V + RG ++TRL KL AI+ + AG+ RL + V Sbjct: 125 LGTSSARRRALSLHYNPRIRVENLRGNLDTRLRKLREGLYDAIIASEAGLIRLGVD-VEY 183 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ FPP+PGQG + + V + +++++ ++ W ER L C++ Sbjct: 184 TPLDPSYFPPAPGQGFVAVVARVGS-NVEKMLRDLDKPPWWHVAWAERGVLEGARAGCRT 242 Query: 247 AIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +A +A G S + L+ DG + G +A IG Sbjct: 243 PVAAYAEPLGRSMVRVTAAALSPDGSRAYWARAEGRIEEARRIG 286 >gi|156064079|ref|XP_001597961.1| hypothetical protein SS1G_00047 [Sclerotinia sclerotiorum 1980] gi|154690909|gb|EDN90647.1| hypothetical protein SS1G_00047 [Sclerotinia sclerotiorum 1980 UF-70] Length = 379 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 97/305 (31%), Positives = 149/305 (48%), Gaps = 18/305 (5%) Query: 3 KKP--FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 +KP IGTR S LA+ + +++L H P N I L T GD+ L + G Sbjct: 48 EKPATIHIGTRKSALAMVQTEQVKAALEKAH--PNLNFEITKLETMGDKNQVTALHDFGA 105 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117 K L+T E+E L+ +D VH KDMPT+L + I A L RED RD I ++ Sbjct: 106 KSLWTHELEALLLERNLDIVVHCLKDMPTQLPQKCTIGAILEREDPRDALIMKAGSNYKT 165 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAG 175 L +L SV+GTSS+RR A + ++ + RG I TRLNKL ++ K ++LA AG Sbjct: 166 LSELPAGSVVGTSSVRRSAQIAMKYPELKFENARGNIGTRLNKLDADDGKYSCLILAAAG 225 Query: 176 IKRLKKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 + R+ + I + L+ + + GQGA+ +E + + +V + HE T + Sbjct: 226 LLRMGWGERITQYLDSKTEGGGMLHAVGQGALALEVRDGDEEINTMVSALQHEPTQLAGL 285 Query: 232 CERAFLAELDGSCKSAIA-GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 ER+ + L+G C I + + L IV++ DG S R + I + Sbjct: 286 AERSLMRTLEGGCSVPIGVETTWIEKGKLLMKAIVVSLDGT----ESVESERLEEILTPK 341 Query: 291 DAAQY 295 DA ++ Sbjct: 342 DADEF 346 >gi|39940760|ref|XP_359917.1| hypothetical protein MGG_04860 [Magnaporthe oryzae 70-15] gi|145010915|gb|EDJ95571.1| hypothetical protein MGG_04860 [Magnaporthe oryzae 70-15] Length = 340 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 94/319 (29%), Positives = 156/319 (48%), Gaps = 20/319 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR SPLA+ T + L H P + ++T+GD+ L +G KG++T Sbjct: 7 IKIGTRRSPLAIRQVEHTVALLQKAH--PDITFEVNAIATQGDKDKVSPLPSMG-KGMWT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF------ISHTAQSLK 119 E+E L +GE+D VH KDMPT L ++ A + RED RDV + +++ Sbjct: 64 NELEAMLTTGEVDFIVHCLKDMPTTLPDNCELGAVMEREDPRDVVVIKPKHVQAGCKTIA 123 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177 DL S++GTSS RR + L RW ++ D+RG I+TRL KL+ + + I+LA AG+ Sbjct: 124 DLPKGSLVGTSSPRRSSQLKRWYPELRFRDYRGNIDTRLRKLDAEDGEFDCIILAAAGLH 183 Query: 178 RLKKEKVIKEILNIE----DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 R+ + I + L+ + GQGA+ +E + + ++++ + T + E Sbjct: 184 RMDQHSRIAQYLDSTTEGGGVLHAVGQGALGLEVRKGDIETLKVIECLVDMPTMKAGWAE 243 Query: 234 RAFLAELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINI 288 R + L+G C I +G TL V+A DG + + N+ +A + Sbjct: 244 RTVMRTLEGGCSVPIGVETSWSDEGKTLRLRATVVALDGSEAVDADASASVSNQEEAEAL 303 Query: 289 GRDAAQYIRFISNKNVFNF 307 G+ +Q + K + + Sbjct: 304 GKQVSQVLVERGAKKILDV 322 >gi|167769475|ref|ZP_02441528.1| hypothetical protein ANACOL_00809 [Anaerotruncus colihominis DSM 17241] gi|167668443|gb|EDS12573.1| hypothetical protein ANACOL_00809 [Anaerotruncus colihominis DSM 17241] Length = 295 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 91/287 (31%), Positives = 147/287 (51%), Gaps = 9/287 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKG 62 K ++G+R S LA+ A + ++ V + P + ++ + T GD+I +RTL +IGGKG Sbjct: 2 KHLKVGSRESRLAVIQA---KLAMDAVREWDPEIELELVAMKTTGDKILDRTLDKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E++ L++G +D VHS KD+P L L ++ + R D RD + + +L Sbjct: 59 LFVRELDAALLNGMVDFTVHSCKDLPMDLDPRLPLAGFSKRADPRDALV--LPNGVYELD 116 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 IG +S RR L + V RG ++TRL KL++ + A++LA AG+ RL E Sbjct: 117 PAKPIGCASARRAVQLKKLFPGQPVAPVRGNVQTRLQKLDDGQYAALVLAAAGLVRLGLE 176 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + ++ P+ GQG + ++ A L + D+ D ERAF+ LDG Sbjct: 177 DRITRYFSTDEMLPAAGQGILAVQARAGE-NASYLSAFFDR-DSADCALAERAFVRRLDG 234 Query: 243 SCKSAIAGFAYCKGSTLYFYGI-VLASDGKIFHEVSRNGNRCDAINI 288 C S A +A +G TL G+ V A +F + ++ +A+ I Sbjct: 235 GCTSPTAAYATVQGETLTLRGMDVTAKGAPVFDTILGPRSQGEALGI 281 >gi|302662015|ref|XP_003022667.1| porphobilinogen deaminase Hem3, putative [Trichophyton verrucosum HKI 0517] gi|291186626|gb|EFE42049.1| porphobilinogen deaminase Hem3, putative [Trichophyton verrucosum HKI 0517] Length = 331 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 99/291 (34%), Positives = 146/291 (50%), Gaps = 17/291 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K F IGTR S LA+ R +L V + P + GD L E K Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRDAL--VARWPDCEFNVHTRDAAGDLNKVTPLREFTSKN 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119 L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q +L Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPEACTLSAIMKREDPRDALVVKKGQPKMTLA 122 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177 +L SV+GTSS+RR A L R + VID RG I+TRL KL+ I+LA AG+ Sbjct: 123 ELPAGSVVGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER Sbjct: 183 RSGHGDRIAQYLDSKNGKMLHAVGQGALGVEIRADDEKMAEMLREIGDQKTTFACLAERN 242 Query: 236 FLAELDGSCKSAIAGF-------AYCKGSTLYFYGIVLASDGKIFHEVSRN 279 L L+G C SA G A G L IV + DGK E+ ++ Sbjct: 243 LLRTLEGGC-SAPLGVETEWVPDASGNGEMLRLRCIVTSIDGKEAVEIEKD 292 >gi|302511047|ref|XP_003017475.1| porphobilinogen deaminase Hem3, putative [Arthroderma benhamiae CBS 112371] gi|291181046|gb|EFE36830.1| porphobilinogen deaminase Hem3, putative [Arthroderma benhamiae CBS 112371] Length = 331 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 99/291 (34%), Positives = 146/291 (50%), Gaps = 17/291 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K F IGTR S LA+ R +L V + P + GD L E K Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRDAL--VARWPDCEFNVHTRDAAGDLNKVTPLREFTSKN 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119 L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q +L Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPEACTLSAIMKREDPRDALVVKKGQPKMTLA 122 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177 +L SV+GTSS+RR A L R + VID RG I+TRL KL+ I+LA AG+ Sbjct: 123 ELPAGSVVGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER Sbjct: 183 RSGHGDRIAQYLDSKNGKMLHAVGQGALGVEIRADDEKMAEMLREIGDQKTTFACLAERN 242 Query: 236 FLAELDGSCKSAIAGF-------AYCKGSTLYFYGIVLASDGKIFHEVSRN 279 L L+G C SA G A G L IV + DGK E+ ++ Sbjct: 243 LLRTLEGGC-SAPLGVETEWVPNASGNGEMLRLRCIVTSIDGKEAVEIEKD 292 >gi|227502550|ref|ZP_03932599.1| porphobilinogen deaminase [Corynebacterium accolens ATCC 49725] gi|227076712|gb|EEI14675.1| porphobilinogen deaminase [Corynebacterium accolens ATCC 49725] Length = 295 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 95/285 (33%), Positives = 143/285 (50%), Gaps = 10/285 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F+IGTR S LA A R L+D +IV +T GD TN E G G+FT Sbjct: 2 FQIGTRGSKLATTQAGHVRDWLIDAGFDSELHIV----TTAGD--TNMAPVERIGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124 + + + L GE D AVHS KD+PT + + +P R+D R+V ++ +L L Sbjct: 56 QALREALCRGECDIAVHSFKDLPTA--EDDRFRLVIPQRQDSREVLVARDGMTLMQLPEG 113 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTS+ RR + L R D+ + RG I+TR++K+ + + A++LAYAG+ R E Sbjct: 114 ARVGTSAPRRISQLAALRPDLEIRPLRGNIDTRMSKVTDGELDAVVLAYAGLLRGGYEDR 173 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 +I + E F P+P QGA+ IE +A + + E + ERA LA L+ C Sbjct: 174 ASDIFDPELFMPAPAQGALAIEAVAGT-EAAAALDAVVDEQATAAALAERAVLARLEAGC 232 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 + +A + G L G V A DG + +G +A +G Sbjct: 233 TAPVAATSRWNGDQLTVRGGVFALDGSRQLTATASGTAAEAAELG 277 >gi|171185430|ref|YP_001794349.1| porphobilinogen deaminase [Thermoproteus neutrophilus V24Sta] gi|229846306|sp|B1YDP0|HEM3_THENV RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|170934642|gb|ACB39903.1| porphobilinogen deaminase [Thermoproteus neutrophilus V24Sta] Length = 296 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 95/308 (30%), Positives = 144/308 (46%), Gaps = 38/308 (12%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+ TR S L+L +T L + + P I+ + T GD I ++ L +IG KG+F Sbjct: 3 IRVATRGSKLSL---IQTEELLAQIKAVEPDIRFEIVVVKTTGDLIQDKPLFQIGVKGVF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ ++ GE D AVHS KD+P+ L GL ++ Y R D +S +L+ L Sbjct: 60 EKEVNLAVLRGEADMAVHSLKDLPSDLTPGLALAGYSRRAPPNDALVSPRGYTLETLPRG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--KKE 182 +V+GTSS+RR L R D+ + RG ++TR+ K+ + + A ++A AG++RL Sbjct: 120 AVVGTSSVRRAEFLKAARPDLEIKPLRGNVDTRVAKILSGQYDAAVMAAAGLQRLYGGAP 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA------- 235 + L +ED PP PGQG + V EDTW + RA Sbjct: 180 PIPAVPLAVEDLPPPPGQGIVA--------------AVAREEDTWLTDLLRRASDRKAAA 225 Query: 236 -------FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 FLAE+ C A+ G A + + F + G H V G D + Sbjct: 226 EAAAERAFLAEVGAGCHVAVGGIARQTPAGIEFTAGY--AQGGRKHLVKVYGE--DPTEV 281 Query: 289 GRDAAQYI 296 GR AA+ + Sbjct: 282 GRRAARLV 289 >gi|149240385|ref|XP_001526068.1| porphobilinogen deaminase [Lodderomyces elongisporus NRRL YB-4239] gi|146450191|gb|EDK44447.1| porphobilinogen deaminase [Lodderomyces elongisporus NRRL YB-4239] Length = 347 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 99/319 (31%), Positives = 164/319 (51%), Gaps = 24/319 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IG R S LA+ + + ++ ++ P +I + LST GD++ + L GGK L+T Sbjct: 20 LQIGGRKSKLAVVQSQLVQQAIQKIYPDLPSSI--LALSTLGDKVQTQPLYTFGGKSLWT 77 Query: 66 EEIEKKLISG------EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---Q 116 +E+E L+ G +D VHS KDMPT L + ++ RED RD + + Sbjct: 78 KELEILLMDGIDDEFPRLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAIVMKQGSPYK 137 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYA 174 L+DL S++GTSS+RR + L++ + RG I+TRLNKL++ N ++LA A Sbjct: 138 YLRDLPAGSIVGTSSIRRSSQLIKNYPHLKFESVRGNIQTRLNKLDDPSNPYCCLILASA 197 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC-- 232 G+ RL I L+ + + GQGA+ IE ++ + +E++K I ED ++ C Sbjct: 198 GLIRLGLGGRITSCLDEVYY--AVGQGALGIEIRKDDHQVKEILKKI--EDPVATICCLA 253 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDG--KIFHEVSRN-GNRCDAIN 287 ER+ + L+G C + + ST L GI+++ DG I EV++ +R D Sbjct: 254 ERSLMRYLEGGCSVPLGVHSEYNESTKKLTLKGIIVSPDGSKSIEDEVTKTIESREDCEA 313 Query: 288 IGRDAAQYIRFISNKNVFN 306 +G D ++ K + + Sbjct: 314 VGIDLGDRLKAKGAKEILD 332 >gi|302205429|gb|ADL09771.1| Porphobilinogen deaminase [Corynebacterium pseudotuberculosis C231] gi|308275667|gb|ADO25566.1| Porphobilinogen deaminase [Corynebacterium pseudotuberculosis I19] Length = 296 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 89/289 (30%), Positives = 139/289 (48%), Gaps = 9/289 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F IGTR S LA + R +L+ +IV P GD N E G G+FT Sbjct: 3 FTIGTRGSLLATTQSGHVRDALISQGYSAELSIVTTP----GD--VNMAPVERIGVGVFT 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124 + + L+ G D AVHS KD+PT+ + + +P R D RD ++ +L +L Sbjct: 57 QALRDVLVKGGCDIAVHSFKDLPTQ--RDPRFHLIVPERADARDCLVARDGLTLAELPQG 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGT + RR + + R D+ + RG I+TR+ K+ + + A++LAYAG+ R+ + Sbjct: 115 ARIGTGAPRRISQIKALRPDVECVPLRGNIDTRMGKVFSGELDAVVLAYAGLSRVGRGDE 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E+ N E F P+P QGA+ IE V++ A + I + + ER L L+ C Sbjct: 175 ATEVFNPERFLPAPAQGALAIECRVDDAAAVAAINAIRNAEDETCALAERVVLNRLEAGC 234 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 + +A + L G V++ DG + G +A+ IG A Sbjct: 235 TAPVAAHSVIIEQELQVTGAVISLDGSKVFRATMTGGLSEAVAIGEKVA 283 >gi|16611929|gb|AAL27412.1|AF429957_3 porphobilinogen deaminase [uncultured bacterium] Length = 299 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 82/259 (31%), Positives = 138/259 (53%), Gaps = 25/259 (9%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 R+ TR S LAL A L+ + ++ + T+GDR R ++ G+G FT+ Sbjct: 5 RLATRGSRLALWQAEWVAKQLVQQGA----EVELVVVETQGDR-EKRPFAQMQGQGFFTK 59 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF------ISHTAQSLKD 120 +++ ++ G D AVHS KD+P+ GL+I+A PRED R++ + A L Sbjct: 60 AVQEAVLEGRADFAVHSYKDLPSARPAGLEIAAVPPREDPRELLLVRLQAVDQVAPGLP- 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+S+ RR+A L R D+S+++ RG + TR+ KL + A+LLAYAG++RL Sbjct: 119 LRAGARVGSSAARRQAQLAHLRPDLSLLELRGNVLTRVEKLRQGEYDAVLLAYAGVRRLG 178 Query: 181 KE------KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 + +V+ L + P+P QGA+ +E ++ + + L++ ++ D V C Sbjct: 179 LDLSPFHWQVLPPTLLV----PAPAQGALALECRQDDKRLRPLLEPLD--DPSAGVRCGG 232 Query: 235 A-FLAELDGSCKSAIAGFA 252 A +A L G C+ A+ A Sbjct: 233 AGLMARLAGGCQLALGALA 251 >gi|45185123|ref|NP_982840.1| ABL107Cp [Ashbya gossypii ATCC 10895] gi|55976464|sp|Q75DY0|HEM3_ASHGO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|44980759|gb|AAS50664.1| ABL107Cp [Ashbya gossypii ATCC 10895] Length = 326 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 95/321 (29%), Positives = 157/321 (48%), Gaps = 17/321 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ RI R S LA+ + + + + P + ++ T GD++ ++ L GG Sbjct: 1 MGEETLRIAGRRSKLAVIQSESVKEIVQ--REFPNYTCTVLAKQTLGDQVQSKPLYAFGG 58 Query: 61 KGLFTEEIEKKL----ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA- 115 K L+T+E+E L + ID VHS KDMPT+L +G ++ A R D D + Sbjct: 59 KALWTKELEDLLYEEDLDQRIDMIVHSLKDMPTQLPEGFELGAITKRVDPSDCLVMAAGS 118 Query: 116 --QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILL 171 ++L DL SV+GTSS+RR A L R + RG I+TRL KL++ N+ I+L Sbjct: 119 PYKTLGDLPNGSVVGTSSIRRSAQLRRRYPHLVFASVRGNIQTRLKKLDDPENECKCIIL 178 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ RL E I + + + GQGA+ IET + + Q ++ + ++ Sbjct: 179 ATAGLVRLGLESRITQRFDSTIMLHAVGQGALGIETRTGDERLQAILAKVADRNSTICCL 238 Query: 232 CERAFLAELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRN----GNRCDA 285 ER+ + L+G C I ++ + S L G+V++ DG E + + ++ DA Sbjct: 239 AERSLMRTLEGGCSVPIGVYSTFDEETSMLTLDGLVVSVDGADAAEATVSYKIKSDKEDA 298 Query: 286 INIGRDAAQYIRFISNKNVFN 306 I G+ A + K + + Sbjct: 299 IACGQLLAAKLLEAGAKKILD 319 >gi|255725590|ref|XP_002547724.1| porphobilinogen deaminase [Candida tropicalis MYA-3404] gi|240135615|gb|EER35169.1| porphobilinogen deaminase [Candida tropicalis MYA-3404] Length = 340 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 93/284 (32%), Positives = 150/284 (52%), Gaps = 20/284 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IG R S LA+ + + ++ D P + I+ LST GD++ + L GGK L+T Sbjct: 14 VQIGGRKSKLAVVQSELVKKAIEDT--FPNLSCSILALSTLGDKVQTQPLYTFGGKSLWT 71 Query: 66 EEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117 +E+E L+ ++D VHS KDMPT L + ++ RED RD + + +S Sbjct: 72 KELEILLLDSIDEYPQLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAVVMKSGSPYKS 131 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAG 175 LKDL +++GTSS+RR + L++ + RG I+TRLNKL+ +N+ ++LA AG Sbjct: 132 LKDLPAGAIVGTSSIRRSSQLIKNYPHLRFESVRGNIQTRLNKLDQPDNEYCCLILASAG 191 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC--E 233 + RL I L +D + GQGA+ IE + K + +++ I ED +V C E Sbjct: 192 LIRLGLGDRITSFL--DDMYYAVGQGALGIEIRRGDDKVKPILQKI--EDPIATVCCLAE 247 Query: 234 RAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHE 275 R+ + L+G C + + T L GI+++ DG ++ E Sbjct: 248 RSLMRYLEGGCSVPLGVNSNYNEDTQELTLKGIIVSPDGSVWIE 291 >gi|134055399|emb|CAK43953.1| unnamed protein product [Aspergillus niger] Length = 346 Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 95/284 (33%), Positives = 135/284 (47%), Gaps = 20/284 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVH---KIPPHNIVIIPLSTKGDRITNRTLTEIGG-- 60 R+GTR S LAL A L H + P +V+ +GD + + G Sbjct: 12 LRLGTRNSKLALVQAEHVSKELTSAHPGVQFPWQTVVV-----RGDADKSSPFLKFAGPS 66 Query: 61 ---KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-- 115 K ++TEE+E KL +GE+D VH KDMPT+L + + A + RED D + Sbjct: 67 DAAKNIWTEEMETKLCAGELDLLVHCLKDMPTRLPETCTLGAIVYREDPTDALVIKEGLR 126 Query: 116 ---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAIL 170 L L SV+GTSS RRKALL + V + RG + TRL KL++ + AI+ Sbjct: 127 SQYTDLSQLPPGSVVGTSSTRRKALLRYRYPHLKVEECRGNLGTRLKKLDDPEGPFSAII 186 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 LA AG+ R+ E I + L +FP + GQGA+ IE + + + +V+ I T Sbjct: 187 LATAGMVRINLEDRITKRLPPSEFPYAVGQGALGIEIRKEDAQTKTMVRKIEDLVTRRIC 246 Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFH 274 ER+ L L G C S +A + + L DG I H Sbjct: 247 LAERSLLRTLQGGCSSPVAVHCTVEQAPTASSPAQLRLDGTIIH 290 >gi|312216693|emb|CBX96643.1| hypothetical protein [Leptosphaeria maculans] Length = 398 Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 96/277 (34%), Positives = 132/277 (47%), Gaps = 14/277 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG----G 60 P IGTR S LA A SL + H P I P+ +GDR L ++ Sbjct: 30 PINIGTRNSVLAQIQARAVERSLKEAH--PERTYNICPVVVQGDRDKTTPLQQLSRGENA 87 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT----AQ 116 K L+T E+E L SGE+D VH KDMPT+L L++ A L RED RD + Sbjct: 88 KSLWTGELESMLESGELDLIVHCLKDMPTQLPDNLELGAILEREDPRDALLISPRLPKET 147 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYA 174 +L L + IGTSS+RR A L + + D RG + TRL KL+ ++ AI+LA A Sbjct: 148 TLATLPQGATIGTSSVRRSATLRKLFPHLKFADLRGNVGTRLAKLDAEDSPYSAIILAAA 207 Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 G+KR+ + I + L+ + GQGA+ IE + + L+ I E T + + Sbjct: 208 GLKRMGLDNRITQYLSSTSGGMLHAVGQGALGIEIRKGDESTKALLSKIRCERTTRACSA 267 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269 ERA L L+G C I +G G A D Sbjct: 268 ERALLRTLEGGCSVPIGVETSWRGGRGLTTGAQPARD 304 >gi|325954067|ref|YP_004237727.1| porphobilinogen deaminase [Weeksella virosa DSM 16922] gi|323436685|gb|ADX67149.1| porphobilinogen deaminase [Weeksella virosa DSM 16922] Length = 306 Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 92/298 (30%), Positives = 141/298 (47%), Gaps = 20/298 (6%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR SPLAL A + + L I IIP+ ++GD + + +G G+ Sbjct: 2 KKIRIGTRQSPLALWQANKVAALLSK----KGCEIEIIPIKSEGDLNLKQPIYSLGITGV 57 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ ++ L++ +ID AVHS KD+PT L +GL + A+ R + D+ + + Sbjct: 58 FTKSLDIALLNNKIDIAVHSLKDVPTVLPEGLALKAFPERANSSDILVYKSNDIFT--KT 115 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR----- 178 H I T SLRR+A L + +++D RG ++ RL KL +N + A AG+ R Sbjct: 116 HRTIATGSLRRRAFWLHRYPEDTLVDLRGNVQLRLQKLQDNDWDGAIFAMAGLDRSEIIA 175 Query: 179 -LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 L+ K+ ++ PS G + + P IN+E+ ER FL Sbjct: 176 DLENRKLHYSTIDWMLAAPSQGILGVVAREDFDFPS-------INNEECELYATVERQFL 228 Query: 238 AELDGSCKSAIAGFAYCKGSTLY-FYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 L+G C + I + +Y F G +L+ DGK EV NR + GR A+ Sbjct: 229 NVLEGGCTAPIGALVSPLSADMYRFQGTILSLDGKEKIEVVDQFNRSEYKEFGRKMAE 286 >gi|297516477|ref|ZP_06934863.1| porphobilinogen deaminase [Escherichia coli OP50] Length = 221 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 71/187 (37%), Positives = 103/187 (55%) Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 RED RD F+S+ +L L S++GTSSLRR+ L R D+ + RG + TRL+KL+ Sbjct: 9 REDPRDAFVSNNYDNLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLD 68 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + +EL+ +N Sbjct: 69 NGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALN 128 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 H +T V ERA L+G C+ I +A ++ +V A DG R G Sbjct: 129 HHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAP 188 Query: 283 CDAINIG 289 DA +G Sbjct: 189 QDAEQMG 195 >gi|124485351|ref|YP_001029967.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Methanocorpusculum labreanum Z] gi|124362892|gb|ABN06700.1| uroporphyrin-III C-methyltransferase [Methanocorpusculum labreanum Z] Length = 542 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 91/252 (36%), Positives = 140/252 (55%), Gaps = 20/252 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LALA + L+ + I ++I T GD++T+R L +IGG G+F Sbjct: 4 IRIGTRGSKLALAQTKKV-IGLLAENGIDAEYVII---KTTGDKVTDRGLHQIGGFGMFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E++ ++ GEIDCAVHS KD+P + KGL A L R+ D + + ++DL Sbjct: 60 RELDNAILRGEIDCAVHSMKDIPAERPKGLLTVAVLKRDPPYDFLVMNG--KVEDLM--- 114 Query: 126 VIGTSSLRRKALLLRWRSD---ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-K 181 VIGTSSLRRKA LLR+ + + V RG ++TRL KL++ I++A AG+ RL K Sbjct: 115 VIGTSSLRRKAQLLRYFHNCPAVRVEMLRGNLDTRLGKLDDGLYDGIMVAEAGLMRLDYK 174 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC--ERAFLAE 239 ++ L+ + F P+ QG I I + + P+ + +N D +++C ER + + Sbjct: 175 RNGVR--LSPDMFVPAANQGTIAIVSR-DTPELRAAFAPLN--DPQSALDCAIERIVMEQ 229 Query: 240 LDGSCKSAIAGF 251 + G C + + F Sbjct: 230 VGGGCFTPMGIF 241 >gi|50305837|ref|XP_452879.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|55976379|sp|Q6CT60|HEM3_KLULA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|49642012|emb|CAH01730.1| KLLA0C15147p [Kluyveromyces lactis] Length = 327 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 101/318 (31%), Positives = 158/318 (49%), Gaps = 16/318 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ RIG R S LA+ + + + +M K ++ + T GD++ ++ L GGK Sbjct: 4 KETVRIGGRRSKLAVVQSEQVK--VMIESKFSHIECPLLSVHTLGDQVQSKPLYSFGGKA 61 Query: 63 LFTEEIEKKLISGE---IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF---ISHTAQ 116 ++T+E+E L + ID VHS KDMPT L G ++ R D D I Sbjct: 62 VWTKELEDLLYKDDESRIDLIVHSLKDMPTLLPDGFELGGITKRVDPTDALVMPIGSPYS 121 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYA 174 SL +L SV+GTSS+RR A L R ++ RG I+TRL KL++ + I+LA A Sbjct: 122 SLSELPDGSVVGTSSVRRSAQLKRKFPNLKFESIRGNIQTRLAKLDDPETPYKCIVLASA 181 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G+ R + I + N + + GQGA+ IE ++ K ++++K I T ER Sbjct: 182 GLMRSGLDSRITQRFNADTMCYAVGQGALGIEIRKDDEKMKKILKEICDPSTTICCLAER 241 Query: 235 AFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDG----KIFHEVSRNGNRCDAINI 288 + L L+G C I + ST L GIV+ +G +I H+V+ + R D+IN Sbjct: 242 SLLRTLEGGCSVPIGVVSNYDESTKVLTLKGIVINVEGTEWVEIEHKVTISNEREDSINC 301 Query: 289 GRDAAQYIRFISNKNVFN 306 G++ A + K + + Sbjct: 302 GKELAAKLTQNGAKEILD 319 >gi|182415288|ref|YP_001820354.1| porphobilinogen deaminase [Opitutus terrae PB90-1] gi|177842502|gb|ACB76754.1| porphobilinogen deaminase [Opitutus terrae PB90-1] Length = 284 Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 89/265 (33%), Positives = 130/265 (49%), Gaps = 21/265 (7%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV--IIPLSTKGDRITNRTLTEIGGK 61 K + TR SPLAL ++ ++ H + ++ L T GDR T +L + GGK Sbjct: 2 KKLILATRKSPLAL-----RQTEMVAAHLEARLGVQTELLKLVTTGDRQTEWSLEQKGGK 56 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT E+E L GE D AVHS KD+P + L ++ YLPR D RDV + + Sbjct: 57 GLFTSELENALRRGEADLAVHSTKDLPGDMAAELAVAGYLPRADARDVLVLRAG-----V 111 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL- 179 A + T S RR+ + + ++ + RG ++TRL K+ A +LA AG+ RL Sbjct: 112 AAPKSLATGSPRRRLQIAKLYPGVTFTEIRGNVDTRLKKIGELGVADGTVLASAGLNRLG 171 Query: 180 --KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 V L D P+ GQGAI ++ + A V + T +V+ ERAF Sbjct: 172 IGNWPGVEFHALGFNDMVPAVGQGAIAVQCRAAD--AARFAPVFDAA-TKRAVDVERAFQ 228 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFY 262 A L C++A A+ G TL+F+ Sbjct: 229 AALGVGCQTAFG--AHVAGDTLHFF 251 >gi|300857688|ref|YP_003782671.1| porphobilinogen deaminase [Corynebacterium pseudotuberculosis FRC41] gi|300685142|gb|ADK28064.1| Porphobilinogen deaminase [Corynebacterium pseudotuberculosis FRC41] gi|302329983|gb|ADL20177.1| Porphobilinogen deaminase [Corynebacterium pseudotuberculosis 1002] Length = 296 Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 89/289 (30%), Positives = 139/289 (48%), Gaps = 9/289 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F IGTR S LA + R +L+ +IV P GD N E G G+FT Sbjct: 3 FTIGTRGSLLATTQSGHVRDALISQGYSAELSIVTTP----GD--VNMAPVERIGVGVFT 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124 + + L+ G D AVHS KD+PT+ + + +P R D RD ++ +L +L Sbjct: 57 QALRDVLVKGGCDIAVHSFKDLPTQ--RDPRFHLIVPERADARDCLVARDGLTLAELPQG 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGT + RR + + R D+ + RG I+TR+ K+ + + A++LAYAG+ R+ + Sbjct: 115 ARIGTGAPRRISQIKALRPDVECVPLRGNIDTRMGKVFSGELDAVVLAYAGLSRVGRGDE 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E+ N E F P+P QGA+ IE V++ A + I + + ER L L+ C Sbjct: 175 ATEVFNPERFLPAPAQGALAIECRVDDAAAVAAINAIRNAEDETCALAERVVLNRLEAGC 234 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 + +A + L G V++ DG + G +A+ IG A Sbjct: 235 TAPVAAHSVIIEQELQVTGAVISLDGSKVLRATMTGGLSEAVAIGEKVA 283 >gi|281348599|gb|EFB24183.1| hypothetical protein PANDA_019874 [Ailuropoda melanoleuca] Length = 298 Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 83/224 (37%), Positives = 118/224 (52%), Gaps = 10/224 (4%) Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH--- 113 +IG K LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H Sbjct: 1 QIGEKSLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKF 60 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLA 172 ++L+ L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA Sbjct: 61 VGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILA 120 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 AG++R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T Sbjct: 121 AAGLQRMGWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIA 180 Query: 233 ERAFLAELDGSCKSAIAGFAYCK------GSTLYFYGIVLASDG 270 ERAFL L+G C +A K G LY G V + DG Sbjct: 181 ERAFLRHLEGGCSVPVAVHTAMKDGQASRGRWLYLTGGVWSLDG 224 >gi|207109051|ref|ZP_03243213.1| porphobilinogen deaminase [Helicobacter pylori HPKX_438_CA4C1] Length = 242 Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 91/241 (37%), Positives = 131/241 (54%), Gaps = 5/241 (2%) Query: 10 TRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIE 69 +R S LAL A + L I ++ TKGD+I + L +IGGKGLFT+E+E Sbjct: 1 SRGSELALWQANHIKERLKKECFIESEIQIV---KTKGDKILDTPLNKIGGKGLFTKELE 57 Query: 70 KKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGT 129 + L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + +GT Sbjct: 58 ELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKVGT 117 Query: 130 SSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IKEI 188 +SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + ++ Sbjct: 118 TSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYRKA 177 Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248 ++E+ PS GQGA+ +E N+ L K +N E + ER F+ L+G C+ I Sbjct: 178 FSVEEMIPSMGQGALGVEMLKNHKHFITLQK-LNDEKSAFCCRLEREFIKGLNGGCQIPI 236 Query: 249 A 249 Sbjct: 237 G 237 >gi|28202885|gb|AAO35329.1| porphobilinogen deaminase [Clostridium tetani E88] Length = 218 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 73/193 (37%), Positives = 103/193 (53%), Gaps = 2/193 (1%) Query: 80 AVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLL 139 AVHS KD+P ++ I A RED+RD F+S +L S IGTSS RR + + Sbjct: 2 AVHSMKDVPYEVPSMFYIGAIPRREDVRDAFVSRDGTKFMELPSGSKIGTSSRRRSSQIK 61 Query: 140 RWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPG 199 R D+ V+ RG ++TRL K+ +LA AG+KRL E+VI + + E+ P+ G Sbjct: 62 ILRPDVEVVPIRGNVQTRLRKIEEMNLAGTILAVAGLKRLNMEEVITDYFSPEEMVPAIG 121 Query: 200 QGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTL 259 QGA+ IE + +K I+HE+T V ER+F+ L G C S I A + + Sbjct: 122 QGALGIEIK-KYEDVIDYIKGIDHEETRICVEGERSFMEALKGDCHSTIGAHAIVENDLM 180 Query: 260 YFYGIVLASDGKI 272 Y GI +GKI Sbjct: 181 YMTGI-FEVNGKI 192 >gi|327311850|ref|YP_004338747.1| porphobilinogen deaminase [Thermoproteus uzoniensis 768-20] gi|326948329|gb|AEA13435.1| porphobilinogen deaminase [Thermoproteus uzoniensis 768-20] Length = 303 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 81/268 (30%), Positives = 135/268 (50%), Gaps = 6/268 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+ TR S L+L +T + + ++ P I+ + T GD + +R L IG KG+F Sbjct: 3 LRVATRGSKLSL---LQTELFIKSIKEVEPDLEFEIVVVKTTGDLVQDRPLYAIGVKGVF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ ++ G+ D AVHS KD+P+++ + L ++ Y R+ D S + L Sbjct: 60 EKEVNLAVLRGQADVAVHSLKDLPSEIHEDLVVAGYSKRDSPYDAIASTRGYDVWGLPRG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSS+RR A L R D+ + RG ++TR+ K+ + A +LA AG++RL E Sbjct: 120 ARVGTSSVRRGAFLKSIRPDLHIEPLRGNVDTRIGKVLSGAVDAAVLAEAGVRRLYGENP 179 Query: 185 IKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 EI + ++ PP PGQG + ++ +L++ + ERAFL E+ G Sbjct: 180 PVEIRRVKPDEIPPPPGQGIVAAVARKDDRGIIDLLRKASDPRAALEARAERAFLKEMGG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270 C A+ G A + + F + DG Sbjct: 240 GCHVAVGGLATATPNGIEFLAGWASVDG 267 >gi|123210216|emb|CAM15096.1| hydroxymethylbilane synthase [Danio rerio] Length = 247 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 88/225 (39%), Positives = 125/225 (55%), Gaps = 6/225 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA +L ++ P ++ I+ +ST GD+I + L++IG K LFT Sbjct: 22 IRMGTRKSQLARIQTDSVAGTLKQLY--PDVHLEIVAMSTIGDKILDTALSKIGEKSLFT 79 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A L RE+ D + H +L L Sbjct: 80 KELENALERNEVDIVVHSLKDLPTSLPPGFTIGAILERENPHDAVVLHPKNAGLTLDSLP 139 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH-AILLAYAGIKRLKK 181 SVIGTSSLRR A L + + + RG + TRL KL+ + AI+LA AG+KR+ Sbjct: 140 EKSVIGTSSLRRAAQLKKRFPQLEFENIRGNLNTRLKKLDEKDDYAAIILAAAGLKRMGW 199 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226 E I ++L ED + GQGA+ +E + E+V V++H DT Sbjct: 200 ESRISQVLGPEDCMYAVGQGALAVEVRAQDKDILEMVSVLHHPDT 244 >gi|170044628|ref|XP_001849943.1| porphobilinogen deaminase [Culex quinquefasciatus] gi|167867697|gb|EDS31080.1| porphobilinogen deaminase [Culex quinquefasciatus] Length = 474 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 76/218 (34%), Positives = 121/218 (55%), Gaps = 12/218 (5%) Query: 21 FETRSSLMDVH---KIPPHNIVII----PLSTKGDRITNRTLTEIGGKGLFTEEIEKKLI 73 +E R VH +P + + ++T GDR+ N++L +IG K LFT+++E L Sbjct: 190 YEIRKYFQHVHLCWHVPSYLLAFFLSPDTMTTVGDRVLNKSLPKIGEKSLFTKDLEDALR 249 Query: 74 SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLALHSVIGTS 130 +G +D VHS KD+PT L G+ I A L R+D RD + +H ++L L SV+GTS Sbjct: 250 TGGVDFVVHSLKDLPTALPLGMAIGAVLERDDPRDALVLNEAHRGRTLSTLPKGSVVGTS 309 Query: 131 SLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRLKKEKVIKEI 188 SLRR A L R ++ V D RG + TRL KL + +K I+LA AG+ R+ + ++ Sbjct: 310 SLRRSAQLARKYENVVVCDIRGNLNTRLAKLDADGSKFAGIILAQAGLVRMGWNARVSQV 369 Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226 + + + GQGA+ +E N+ +++ + H +T Sbjct: 370 IEPGEILYAVGQGALAVECRSNDEYILDMLSKLCHLET 407 >gi|150398808|ref|YP_001322575.1| porphobilinogen deaminase [Methanococcus vannielii SB] gi|150011511|gb|ABR53963.1| porphobilinogen deaminase [Methanococcus vannielii SB] Length = 304 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 82/255 (32%), Positives = 135/255 (52%), Gaps = 20/255 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+ + +SL++ + II + T GD+ N+ L ++G G+FT Sbjct: 3 LRIGTRGSKLAMIQT-KYIASLLNELGVETE---IIIIKTTGDKDQNKKLADLG-IGVFT 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ K++ EID AVHS KD+PT LQI+A RE D+ + + + Sbjct: 58 KELDNKMLENEIDIAVHSLKDVPTLWSDELQITATPKRESPDDLILWNKNSNFNIEYDEL 117 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS+RR A L ++ V RG + TR++KL NN+ I++A AG+ I Sbjct: 118 IVGTSSIRRTAFLELSNPNLKVKLLRGNVATRIDKLRNNEYDGIIMAKAGL--------I 169 Query: 186 KEILNIEDFP-------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 ++ +++ DF P+P QG I + + + + E+++ IN + T+ ER L Sbjct: 170 RQGIDLSDFNYEKLEILPAPAQGVIGVASRKKDYEINEILEKINDKKTYLEAVAERWSLK 229 Query: 239 ELDGSCKSAIAGFAY 253 E G C++ FA+ Sbjct: 230 EYGGGCQAPFGAFAF 244 >gi|115523326|ref|YP_780237.1| porphobilinogen deaminase [Rhodopseudomonas palustris BisA53] gi|115517273|gb|ABJ05257.1| hydroxymethylbilane synthase [Rhodopseudomonas palustris BisA53] Length = 326 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 95/313 (30%), Positives = 148/313 (47%), Gaps = 32/313 (10%) Query: 5 PFRIGTRCSPLALAHA------FETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 P RIGTR S +ALA +S +DV I+ T GD L Sbjct: 4 PVRIGTRKSVMALAQTEDIARRLSAAASELDVE--------IVKFETVGDSDQVSKLLPH 55 Query: 59 GGKG-LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQ 116 GGKG F EI +I+G+++ +HS KDMP + GL I A L R+ D + Sbjct: 56 GGKGGAFVAEIRAAVIAGKLEACMHSLKDMPGNEDTPGLIIGATLSRDPATDALVLRKGL 115 Query: 117 SLKDL----ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK------- 165 +L +L IGT+++RR A R ++++I FRG +TR+ KL+N + Sbjct: 116 TLDELKKSRGKGYTIGTNAVRRAAYAKRLFPEVNIIHFRGAADTRIRKLDNGEMQRLPGG 175 Query: 166 -----AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220 A A+++A +G++R+ I ++ PS GQG + +E +N+ + ++ + + Sbjct: 176 GEVGPADALIMARSGLERVGFVDRIVHDFTPQEMLPSAGQGIVAVECAINDWQIRKYLAM 235 Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 I+ S + ER L L+G C S +A F+ GS + VL G +F E SR+G Sbjct: 236 IDDPVARLSCDAEREVLWVLNGHCNSPMAAFSTINGSDMTLSASVLDETGGLFIEASRSG 295 Query: 281 NRCDAINIGRDAA 293 +GR A Sbjct: 296 PANRPRELGRAVA 308 >gi|145525120|ref|XP_001448382.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124415926|emb|CAK80985.1| unnamed protein product [Paramecium tetraurelia] Length = 306 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 89/273 (32%), Positives = 142/273 (52%), Gaps = 12/273 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTK-GDRITNRTLTEIGGK 61 ++ RI TR S LA+A S L II +S + GD L ++ Sbjct: 2 QRQLRIATRSSALAMAQTNYVISEL-------KQECEIIKVSNEVGDVNLQDPLYQMPTV 54 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118 G+FT+++E+ L+ + D AVHS KD+PT + L ++AY E DV + + +SL Sbjct: 55 GVFTKQVEQYLLEQKADVAVHSLKDLPTIIDAQLHLAAYTKFEQRGDVVLLNKKYNYKSL 114 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L +GTSSLRR A + +++I+ RG + TR+ KL+ + AI+LA AGI R Sbjct: 115 SELPDGLKVGTSSLRRIATIRSRYPKLNLINIRGNLNTRIQKLDEGQYDAIILAKAGILR 174 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + I L+ ++F +P Q A+ I+ ++ + ++++N D ER FL Sbjct: 175 LGLAEKISFDLDEKEFLYAPAQAALGIQCRKDDLETIGRLQILNDTDAQKRCVAERMFLN 234 Query: 239 ELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDG 270 L+G C+ IA ++ C+ +Y G VLA DG Sbjct: 235 LLEGGCRLPIAVYSECREDGQVYIKGRVLAVDG 267 >gi|213406619|ref|XP_002174081.1| porphobilinogen deaminase [Schizosaccharomyces japonicus yFS275] gi|212002128|gb|EEB07788.1| porphobilinogen deaminase [Schizosaccharomyces japonicus yFS275] Length = 335 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 150/307 (48%), Gaps = 24/307 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG---GKG 62 F +G+R S LAL L +++ P +N I+ T GD I N+ L E K Sbjct: 11 FPLGSRKSKLALIQTNLVLKQLKELY--PEYNFPILSRDTVGDEIINKALFEFKTQMAKS 68 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 L+T E+E L+ GE VHS KD+PT L +G+ I+ R D + +S+ Sbjct: 69 LWTRELEVLLMHGECRMLVHSLKDLPTDLPEGMTIACITRRSCPLDAVVMRAGSPYKSVS 128 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177 +L +SV+GTSS+RR+A+L R + D RG + TRL KL+ ++ ++LA AG+ Sbjct: 129 ELPPNSVVGTSSIRRRAMLQRHFPHLKFRDIRGNVGTRLAKLDAPDSPFDCLILAAAGLI 188 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL + I ++L + GQGA+ +E ++ + EL+K + +T S ERA + Sbjct: 189 RLNLKDRITQMLQAPFVFYAVGQGALAVEVRADDTEIIELLKPLQDMETTYSCLAERALM 248 Query: 238 AELDGSCKSAIAGFAYC-----KGSTLYFYGIVLASDG------KIFHEVSRNGNRCDAI 286 L G C I C ++ G+V++SDG F EVS DA Sbjct: 249 KRLQGGCAIPIGVETQCLPLSKDKYSVVLQGMVVSSDGTRSAYASEFMEVSSEK---DAE 305 Query: 287 NIGRDAA 293 +G + A Sbjct: 306 QLGMNVA 312 >gi|256088596|ref|XP_002580415.1| hydroxymethylbilane synthase; porphobilinogen deaminase [Schistosoma mansoni] gi|238665988|emb|CAZ36654.1| hydroxymethylbilane synthase [Schistosoma mansoni] Length = 411 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 85/262 (32%), Positives = 136/262 (51%), Gaps = 23/262 (8%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-IIPLSTKGDRITNRTLTEIGGKGLF 64 R+G+R S LAL +T ++ + K PH + ++ ++T GD+I + +L++IG K LF Sbjct: 10 VRVGSRRSNLAL---LQTGMAVNLLQKQNPHILFEVVEMATVGDKILDVSLSKIGDKSLF 66 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSLKDL 121 T+E+E L+SGE+D VHS KD+P+ L GL + R DV + + + L DL Sbjct: 67 TKELENALLSGEVDLVVHSLKDVPSTLPSGLVLGCVFARVSPEDVVLMAPHYRGRKLSDL 126 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH-------------- 167 + S +GTS++RR A L R + + RG + TRL KL+ A Sbjct: 127 PIGSTVGTSAVRRVATLTRKYPHLKFVSIRGNLNTRLAKLDTPPASKDNCCSGNPSPSYD 186 Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227 AI+LA AG++R+ I ++L + S QGA+ E + + +L+ I+ E Sbjct: 187 AIILAKAGVERMGWSHRIDQVLTDSFYAVS--QGALACECRLVDNFIMDLLSHIHDESAA 244 Query: 228 DSVNCERAFLAELDGSCKSAIA 249 + ER+ + +LDG C I Sbjct: 245 LTTIAERSLMRQLDGGCSIPIG 266 >gi|146419731|ref|XP_001485826.1| hypothetical protein PGUG_01497 [Meyerozyma guilliermondii ATCC 6260] Length = 371 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 94/286 (32%), Positives = 149/286 (52%), Gaps = 18/286 (6%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +IG R LA+A + + L V K P I+ LST GD+I ++ L GGK L Sbjct: 10 KHIQIGGRKLTLAVAQSNIVKKHL--VAKFPQLKCSILALSTLGDQIQSQPLYLFGGKAL 67 Query: 64 FTEEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--- 115 +T+E+E L+ ++D VHS KD+PT L + ++ L R D RDV + Sbjct: 68 WTKELETLLMQAIGGLPQLDMIVHSLKDVPTNLPEEFELGCILDRLDPRDVLVMRKGSKY 127 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAY 173 +SL +L +++GTSS+RR + L++ + RG I TR+ KL+ ++ +LLA Sbjct: 128 KSLAELPAGTMVGTSSVRRSSQLMKNYPHLRFDSARGNINTRVQKLDAEDSPFECLLLAA 187 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC- 232 AG++R+ + I L+ D + GQGA+ +E + + ++L++ I ED S+ C Sbjct: 188 AGLQRVGLDHRITTYLDAPDMYYAVGQGALGVEIRKGDEQIKQLLQAI--EDVPTSLCCH 245 Query: 233 -ERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHE 275 ER+ + L+G C I +T L F IV++ DG F E Sbjct: 246 AERSLMRYLEGGCSVPIGVHTDYDKTTQVLKFNAIVVSPDGNEFVE 291 >gi|294054671|ref|YP_003548329.1| porphobilinogen deaminase [Coraliomargarita akajimensis DSM 45221] gi|293614004|gb|ADE54159.1| porphobilinogen deaminase [Coraliomargarita akajimensis DSM 45221] Length = 284 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 95/260 (36%), Positives = 134/260 (51%), Gaps = 18/260 (6%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR SPLAL R+ L + K+P + + L+T+ D + +L + GG GLFT+E Sbjct: 5 IATRKSPLALKQTEMVRAWLAE--KLPNDHYEELQLTTQVDERLSWSLEKRGGIGLFTKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E+ L++ + AVHSAKDMPT L I+ YLPR DV + + ++ I Sbjct: 63 LEEALLANKATLAVHSAKDMPTTFQDDLCIAGYLPRARANDVIVKRS-----EIESPKRI 117 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNKAHAILLAYAGIKRLKKEKV-- 184 TSS RR+A L +D RG + TRL K+ +A A LLA AG+ RL + Sbjct: 118 ATSSPRRRAQLALLNNDAEWTTLRGNVGTRLRKIAEAQEADATLLAAAGLNRLDIQSYDG 177 Query: 185 IKEI-LNIEDFPPSPGQGAICIETHVNN-PKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I L IE P+PGQ AI I+ + K Q+L EDT +V ER FL L G Sbjct: 178 LDFIELPIEQMVPAPGQAAIAIQCREKDLEKYQDLF----CEDTKLAVTLEREFLHRLGG 233 Query: 243 SCKSAIAGFAYCKGSTLYFY 262 C++ + A+ G+ Y Sbjct: 234 GCQTPVG--AHYNGTVFSIY 251 >gi|319949783|ref|ZP_08023807.1| porphobilinogen deaminase [Dietzia cinnamea P4] gi|319436542|gb|EFV91638.1| porphobilinogen deaminase [Dietzia cinnamea P4] Length = 354 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/257 (29%), Positives = 127/257 (49%), Gaps = 6/257 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + ++GTR S LA A R +L+ P +VI+ T+GD + E G Sbjct: 1 MSSRTLKVGTRGSTLATTQAGHVRDALIAAGY--PAELVIV--RTRGDVVM--APVERIG 54 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT E+ L G+ D AVHS KD+PT A PR D DV I+ +++ Sbjct: 55 VGVFTLELRAALERGDCDIAVHSYKDLPTARDDRFAPIAVPPRVDPSDVLIARDGLTMET 114 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTS+ RR++ L R D+ + RG I+TR+ + + A++LA AG+ R Sbjct: 115 LPQGARVGTSAPRRRSQLAALRPDLDLHPLRGNIDTRMGYVTSGDLDAVVLAAAGLDRTG 174 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I++ P+P QGA+ +E ++ +A + V++H + + ER L +L Sbjct: 175 AGERATHRFGIDEMLPAPAQGALAVEARADDTEAIAALAVVDHLPSRVRIAAERTLLRDL 234 Query: 241 DGSCKSAIAGFAYCKGS 257 + C + + A G+ Sbjct: 235 EAGCTAPVGARAELSGT 251 >gi|145476419|ref|XP_001424232.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124391295|emb|CAK56834.1| unnamed protein product [Paramecium tetraurelia] Length = 306 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 89/273 (32%), Positives = 141/273 (51%), Gaps = 12/273 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTK-GDRITNRTLTEIGGK 61 +K RI TR S LA+A L II +S + GD L ++ Sbjct: 2 QKQIRIATRSSALAMAQTNYVIGEL-------KQEFEIIKVSNEVGDVNLQDPLYQMPTV 54 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118 G+FT+++E+ L+ + D AVHS KD+PT + L ++AY E DV + + +SL Sbjct: 55 GVFTKQVEQYLLEQKADVAVHSLKDLPTIIDAQLYLAAYTKFEQRGDVVLLNNKYNYKSL 114 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L IGTSSLRR A + +++I+ RG + TR+ KL+ + AI+LA AGI R Sbjct: 115 SELPEGFKIGTSSLRRIATIKNRYPKLNLINIRGNLNTRIQKLDEGQYDAIILAKAGILR 174 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + I L ++F +P Q A+ I+ ++ + ++++N D+ ER FL Sbjct: 175 LGLSERISFDLEEKEFLYAPAQAALGIQCRKDDLQTIARLQILNDIDSQKRCVAERMFLN 234 Query: 239 ELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDG 270 L+G C+ IA ++ C+ +Y G V+A DG Sbjct: 235 LLEGGCRLPIAVYSECREDGQVYIKGRVMAVDG 267 >gi|320587748|gb|EFX00223.1| porphobilinogen deaminase [Grosmannia clavigera kw1407] Length = 342 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 98/285 (34%), Positives = 139/285 (48%), Gaps = 24/285 (8%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +GTR S LAL A ++L K PH V+ T GDR L +G KGL+T Sbjct: 9 VGTRSSALALKQAELVVAAL---EKANPHVKFVVDARETAGDRDKVTPLPNLG-KGLWTT 64 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS---LKDLAL 123 E E +L+ G++D VHSAKDMPT L G + A RED RD I + L DL + Sbjct: 65 EFETRLVDGDLDLVVHSAKDMPTTLPVGCLLGAIPKREDPRDAVIFPPGSAYKVLADLPV 124 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN---------NNKAHAILLAYA 174 S++GTSS+RR A L R + D RG I+TRL KL+ + I+LA A Sbjct: 125 GSIVGTSSVRRSAQLRRRFPGLEFRDLRGNIDTRLRKLDAPVPGPDGTTVRYDCIILAAA 184 Query: 175 GIKRLKKEKVIKEILNIEDFPP--SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 G+ R+ I ++L+ + GQGA+ +E + K L++ I + T + Sbjct: 185 GLIRMGFNDRISQLLDSASSGTLYAVGQGAMAVEIRNGDAKTLALLEPIIDKPTMLACLA 244 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKI 272 ERA + L+G C I + + T L +++ DGKI Sbjct: 245 ERAVMRALEGGCSVPIGVESAWEAETAASPRLKLQATIVSLDGKI 289 >gi|317026261|ref|XP_001389286.2| porphobilinogen deaminase [Aspergillus niger CBS 513.88] Length = 329 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 90/259 (34%), Positives = 128/259 (49%), Gaps = 20/259 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVH---KIPPHNIVIIPLSTKGDRITNRTLTEIGG-- 60 R+GTR S LAL A L H + P +V+ +GD + + G Sbjct: 12 LRLGTRNSKLALVQAEHVSKELTSAHPGVQFPWQTVVV-----RGDADKSSPFLKFAGPS 66 Query: 61 ---KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-- 115 K ++TEE+E KL +GE+D VH KDMPT+L + + A + RED D + Sbjct: 67 DAAKNIWTEEMETKLCAGELDLLVHCLKDMPTRLPETCTLGAIVYREDPTDALVIKEGLR 126 Query: 116 ---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAIL 170 L L SV+GTSS RRKALL + V + RG + TRL KL++ + AI+ Sbjct: 127 SQYTDLSQLPPGSVVGTSSTRRKALLRYRYPHLKVEECRGNLGTRLKKLDDPEGPFSAII 186 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 LA AG+ R+ E I + L +FP + GQGA+ IE + + + +V+ I T Sbjct: 187 LATAGMVRINLEDRITKRLPPSEFPYAVGQGALGIEIRKEDAQTKTMVRKIEDLVTRRIC 246 Query: 231 NCERAFLAELDGSCKSAIA 249 ER+ L L G C S +A Sbjct: 247 LAERSLLRTLQGGCSSPVA 265 >gi|241952386|ref|XP_002418915.1| hydroxymethylbilan synthase, putative; porphobilinogen deaminase, putative; pre-uroporphyrinogen synthase, putative [Candida dubliniensis CD36] gi|223642254|emb|CAX44222.1| hydroxymethylbilan synthase, putative [Candida dubliniensis CD36] Length = 340 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 92/281 (32%), Positives = 147/281 (52%), Gaps = 20/281 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IG R S LA+ + + ++ D P + I+ LST GD++ + L GGK L+T Sbjct: 14 VQIGGRKSKLAVVQSEIVKKAIEDT--FPNLSCSILALSTLGDKVQTQPLYTFGGKSLWT 71 Query: 66 EEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117 +E+E L+ ++D VHS KDMPT L + ++ RED RD + + +S Sbjct: 72 KELEILLLDSVDEFPQLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAIVMKQGSSYKS 131 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAG 175 LKDL +++GTSS+RR + L++ + RG I+TRLNKL+ NN+ ++LA AG Sbjct: 132 LKDLPAGAIVGTSSIRRSSQLIKNYPHLRFESVRGNIQTRLNKLDQPNNEYCCLILASAG 191 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC--E 233 + RL I L+ D + GQGA+ IE + + ++K I ED ++ C E Sbjct: 192 LIRLGLGHRITSYLD--DMYYAVGQGALGIEIRKGDDNIKSILKKI--EDPIATICCLAE 247 Query: 234 RAFLAELDGSCKSAIAGFAYCKGS--TLYFYGIVLASDGKI 272 R+ + L+G C + + S L GI+++ DG + Sbjct: 248 RSLMRYLEGGCSVPLGVHSDYNESKQELTLKGIIVSPDGTV 288 >gi|169614115|ref|XP_001800474.1| hypothetical protein SNOG_10192 [Phaeosphaeria nodorum SN15] gi|111061407|gb|EAT82527.1| hypothetical protein SNOG_10192 [Phaeosphaeria nodorum SN15] Length = 397 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 94/277 (33%), Positives = 131/277 (47%), Gaps = 14/277 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG----G 60 P IGTR S LA A ++L H P I P+ +GDR L ++ Sbjct: 30 PVNIGTRNSTLAQIQARAVAAALKSAH--PERTYNICPVVVEGDRDKITPLQQLSQGENA 87 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----Q 116 K L+T E+E L G++D VH KDMPT+L L++ A L RED RD + Sbjct: 88 KSLWTGELETMLEKGDLDIIVHCLKDMPTQLPDNLELGAILEREDPRDALLISPRLPGDT 147 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYA 174 +L L + IGTSS+RR A L R + D RG + TRL KL+ + AI+LA A Sbjct: 148 TLATLPQGATIGTSSVRRAAQLRRLYPHLQFADLRGNVGTRLGKLDKEDSPYSAIILAAA 207 Query: 175 GIKRLKKEKVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 G++R+ E I + L+ + GQGA+ IE ++ + L+ I E T + + Sbjct: 208 GLRRMGLESRITQYLDSATGGMLHAVGQGALAIEIRKDDETMKALLNKIACERTTRACSA 267 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269 ERA L L+G C I +G G A D Sbjct: 268 ERALLRALEGGCSVPIGIETSWRGGKGLAVGAQPAKD 304 >gi|303244099|ref|ZP_07330437.1| porphobilinogen deaminase [Methanothermococcus okinawensis IH1] gi|302485484|gb|EFL48410.1| porphobilinogen deaminase [Methanothermococcus okinawensis IH1] Length = 311 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 91/274 (33%), Positives = 144/274 (52%), Gaps = 21/274 (7%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LALA + ++ L ++++ ++ II T GD+ L+E+G G+FT+E Sbjct: 5 IGTRGSKLALAQTYYIKNLLENLNENLSIDVKII--KTTGDKNQKSKLSELG-LGVFTKE 61 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 ++ K+++ EID AVHS KD+PT + L ISA RE D+ I + + + ++ Sbjct: 62 LDTKMLNNEIDIAVHSLKDVPTVWNENLTISATPKRESYHDLIIWNKNNDIDIEKDNLIV 121 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSS+RRKA L ++ RG I+TRL KL N AI+LA AG+ RLK Sbjct: 122 GTSSIRRKAFLSIKYPNLKTKLLRGNIDTRLRKLRENNYDAIILAEAGLNRLK------- 174 Query: 188 ILNIEDFP-------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +++ +F P+P QG I + + ++ + +++K IN T+ ER L E Sbjct: 175 -IDLSEFNYKRLKILPAPAQGVIGVASRKDDKEIIDILKKINDNKTYLESIAERYALREY 233 Query: 241 DGSCKSAIAGFAY--CKGSTLYFY-GIVLASDGK 271 G C++ + K + LY +V +GK Sbjct: 234 GGGCQAPFGALSKYDTKNNELYLTCDVVYTLNGK 267 >gi|239624018|ref|ZP_04667049.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Clostridiales bacterium 1_7_47_FAA] gi|239522049|gb|EEQ61915.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Clostridiales bacterium 1_7_47FAA] Length = 301 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 91/269 (33%), Positives = 129/269 (47%), Gaps = 15/269 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL L P + ++ T GD+I ++ L E GGKG+F Sbjct: 5 IRIGTRKSALALIQTHLIADGLK--RAWPDIEVELVTKETLGDKILDKPLQEFGGKGVFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E E+ + G ID AVHSAKD+P +L +GL I+A R D RDV ++ S KD H Sbjct: 63 SEFEQAMKEGAIDLAVHSAKDLPMELGEGLVIAAVSGRGDPRDVLVTMKG-SPKDRE-HI 120 Query: 126 VIGTSSLRRKALLLRWR-------SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 VIGTSS RR+ + +R + ++ RG + TRL KL I+LA AG++R Sbjct: 121 VIGTSSPRRQLEAVEYRGQLWPGAASLTCATLRGNVHTRLRKLEEGLYDGIILAAAGLER 180 Query: 179 LK---KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 L + L+ F P+ GQG + +E A L + I+ + + ER Sbjct: 181 LDLLGNPSYDFKYLDPTVFIPAGGQGIMAVEAR-EGSDAARLCQAIDSREGRLCLTLERM 239 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGI 264 L LD C I ++ + +GI Sbjct: 240 VLKLLDAGCHEPIGIYSNIMDGKMEVWGI 268 >gi|254566627|ref|XP_002490424.1| Phorphobilinogen deaminase [Pichia pastoris GS115] gi|238030220|emb|CAY68143.1| Phorphobilinogen deaminase [Pichia pastoris GS115] Length = 344 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 85/254 (33%), Positives = 130/254 (51%), Gaps = 12/254 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++G+R S LA+ A R ++ + P ++ +ST GD++ N+ L GGK L+T Sbjct: 15 LKLGSRKSALAIIQAEIVRQLIL--KEYPELETKLVSVSTLGDQVQNKALFTFGGKSLWT 72 Query: 66 EEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117 +E+E L+ +ID VHS KDMPT L ++ + RED RD + + +S Sbjct: 73 KELEMLLLESVGGFDQIDMIVHSLKDMPTHLPDEFELGCIIEREDPRDALVVQDGLSYKS 132 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAG 175 L DL +V+GTSS+RR A LL+ + RG ++TRL KL++ + +LLA AG Sbjct: 133 LADLPEGAVVGTSSVRRSAQLLKNFPHLKFKSVRGNLQTRLRKLDDPDSEYCCLLLAAAG 192 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + R + I LN + S GQGA+ +E + + + + I H T ERA Sbjct: 193 LIRTGLQHRISMYLNDDVMYHSVGQGALGVEIRKGDQFMKNICEKIGHRTTTLRCLAERA 252 Query: 236 FLAELDGSCKSAIA 249 L L+G C I Sbjct: 253 LLRYLEGGCSVPIG 266 >gi|296809948|ref|XP_002845312.1| porphobilinogen deaminase [Arthroderma otae CBS 113480] gi|238842700|gb|EEQ32362.1| porphobilinogen deaminase [Arthroderma otae CBS 113480] Length = 330 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 96/291 (32%), Positives = 145/291 (49%), Gaps = 14/291 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K F IGTR S LA+ R++L V + P + GD L E K Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRNAL--VARWPDCEFNVHTRDAAGDLNKITPLREFTSKN 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119 L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q +L Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPETCTLSAIIKREDPRDALVVKKGQPNMTLA 122 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177 +L SVIGTSS+RR A L R + VID RG I+TRL KL+ I+LA AG+ Sbjct: 123 ELPAGSVIGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R I + L+ ++ + GQGA+ +E + + E+++ I + T + ER Sbjct: 183 RTGHGYRISQYLDSKNGQMLHAVGQGALGVEIRAGDARMIEMLREIGDQKTTFACLAERN 242 Query: 236 FLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNGN 281 L L+G C + + T L IV + DGK E ++G+ Sbjct: 243 LLRTLEGGCSAPLGVETEWVQDTDGKEMLRLRCIVTSIDGKEAVETEKDGD 293 >gi|86751126|ref|YP_487622.1| porphobilinogen deaminase [Rhodopseudomonas palustris HaA2] gi|86574154|gb|ABD08711.1| hydroxymethylbilane synthase [Rhodopseudomonas palustris HaA2] Length = 326 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 92/307 (29%), Positives = 146/307 (47%), Gaps = 22/307 (7%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSL-MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K P RIGTR S +ALA + + L ++ P I+ T GD L GGK Sbjct: 2 KIPVRIGTRKSVMALAQTEDIANQLRAAASELDPE---IVRFETVGDSDQVSKLLPHGGK 58 Query: 62 G-LFTEEIEKKLISGEIDCAVHSAKDMPT-KLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G F EI ++ GE+ CA+HS KDMP + GL ++A L R+ D + +L Sbjct: 59 GGAFVAEIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPANDSMVLRKGLTLD 118 Query: 120 DLALHS----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK---------- 165 +L IGT+++RR A R ++ VI FRG +TR+ KL+N + Sbjct: 119 ELKASRGKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADTRIRKLDNREKQRMPDGGEV 178 Query: 166 --AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223 A A+++A +G++R+ I ++ P+ GQG + +E V+ + ++ + +I+ Sbjct: 179 GPADALIMARSGLERVGFVDRIVHDFTPQEMLPAAGQGIVAVECPVHEWQTRKYLALIDD 238 Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283 + ER L L+G C S +A ++ GS + VL G +F E +R G Sbjct: 239 PKARLFCDAEREVLWVLNGHCNSPMAAYSTINGSEMTLSASVLDEAGGLFIEATRTGPAN 298 Query: 284 DAINIGR 290 +GR Sbjct: 299 RPRELGR 305 >gi|320106346|ref|YP_004181936.1| porphobilinogen deaminase [Terriglobus saanensis SP1PR4] gi|319924867|gb|ADV81942.1| porphobilinogen deaminase [Terriglobus saanensis SP1PR4] Length = 350 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 103/351 (29%), Positives = 149/351 (42%), Gaps = 65/351 (18%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT-------NRTLTEI 58 R+G+R S LAL A +SL H I + T GDR+ N E+ Sbjct: 3 LRLGSRGSQLALWQANHIAASLRGAG----HTTKITIIRTTGDRMQDPAYVKENPVTPEM 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 KG+F +EIE+ L+ GEID AVHS KD+PT + ++A R D RD +S L Sbjct: 59 DAKGIFIKEIEEALLRGEIDLAVHSLKDLPTVMDPRFTLAAIPTRADARDALLSPEWVQL 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L + +GT+S RRKA +L R D+ ++ RG I+TRL KL + A++LA AGI R Sbjct: 119 HTLPDGARVGTTSPRRKAQMLAHRPDLQFVEIRGNIDTRLRKLAAGQCDALVLACAGIDR 178 Query: 179 LKKEKV--------------------------------------------IKEILNIEDF 194 L + I+E + Sbjct: 179 LGARLLHPVDLDPAHPEHGRAPHVECVTHADHDHLEEHPTEHEPAGQVDWIRERFAADTM 238 Query: 195 PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254 P+PGQGA+ +ET + P+ V ++ +T +V ER L L G C + A+C Sbjct: 239 CPAPGQGALGVETLSDAPEVIAAVSALDDAETRYAVEAERWMLHALGGGCSLPVG--AWC 296 Query: 255 KGSTLYFYGIVLASDGKIFHEVSRN--------GNRCDAINIGRDAAQYIR 297 L D + E+S N G R A + R A + ++ Sbjct: 297 VDKRLTANVTAADGDEMLSSEISANEGESARSLGERVAADLVARGARELLQ 347 >gi|297622476|ref|YP_003703910.1| porphobilinogen deaminase [Truepera radiovictrix DSM 17093] gi|297163656|gb|ADI13367.1| porphobilinogen deaminase [Truepera radiovictrix DSM 17093] Length = 320 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 80/262 (30%), Positives = 127/262 (48%), Gaps = 13/262 (4%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRI--TNRTLTEIGGKGLF 64 RI TR S LAL A R L + ++PL T+GDR + G+G F Sbjct: 21 RIATRKSALALWQATWVRERLAALGV----ATELVPLDTQGDRTQEAGTPFRLMPGQGFF 76 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD---- 120 T+ ++ ++ G D AVHS KD+P+ L GL+++A RED RDV + + + Sbjct: 77 TKAVQDAVLEGRADVAVHSHKDLPSARLAGLELAAVTEREDPRDVLLVRPGAARPESAAL 136 Query: 121 -LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGIK 177 L +V+GTS+ RR+A L R D+ V + RG + TR+ L + A + A Sbjct: 137 PLVEGAVVGTSAARRQAQLRHLRPDVRVAELRGNVPTRVRALREGRYDAVVLAAAGLARL 196 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 L + L+ + F P+P QGA+ +E + + L+ ++ D + +V ER + Sbjct: 197 ALDLSDLTVYPLDPKRFVPAPAQGALALEIRRGDAELAALLTELHAPDAYQTVAAERGLM 256 Query: 238 AELDGSCKSAIAGFAYCKGSTL 259 L G C+ A+ +A +G L Sbjct: 257 GMLQGGCQLALGAYAALQGGEL 278 >gi|328350818|emb|CCA37218.1| hydroxymethylbilane synthase [Pichia pastoris CBS 7435] Length = 376 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 85/254 (33%), Positives = 130/254 (51%), Gaps = 12/254 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++G+R S LA+ A R ++ + P ++ +ST GD++ N+ L GGK L+T Sbjct: 47 LKLGSRKSALAIIQAEIVRQLIL--KEYPELETKLVSVSTLGDQVQNKALFTFGGKSLWT 104 Query: 66 EEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117 +E+E L+ +ID VHS KDMPT L ++ + RED RD + + +S Sbjct: 105 KELEMLLLESVGGFDQIDMIVHSLKDMPTHLPDEFELGCIIEREDPRDALVVQDGLSYKS 164 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAG 175 L DL +V+GTSS+RR A LL+ + RG ++TRL KL++ + +LLA AG Sbjct: 165 LADLPEGAVVGTSSVRRSAQLLKNFPHLKFKSVRGNLQTRLRKLDDPDSEYCCLLLAAAG 224 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + R + I LN + S GQGA+ +E + + + + I H T ERA Sbjct: 225 LIRTGLQHRISMYLNDDVMYHSVGQGALGVEIRKGDQFMKNICEKIGHRTTTLRCLAERA 284 Query: 236 FLAELDGSCKSAIA 249 L L+G C I Sbjct: 285 LLRYLEGGCSVPIG 298 >gi|315654433|ref|ZP_07907341.1| hydroxymethylbilane synthase [Mobiluncus curtisii ATCC 51333] gi|315491468|gb|EFU81085.1| hydroxymethylbilane synthase [Mobiluncus curtisii ATCC 51333] Length = 373 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 87/268 (32%), Positives = 135/268 (50%), Gaps = 28/268 (10%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++P IGTR S LAL +TR+ D+ + H + + +T+GD I +L +GG G Sbjct: 8 ERPLVIGTRASALALT---QTRAVASDLEQRGLH-VQVQTFTTEGD-INRASLASLGGVG 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F + L+ G D VHS KD+PT + GL ++A RED DV ++ + SL DL Sbjct: 63 VFAAALRVALLEGHCDLVVHSLKDLPTVPVDGLVVAATPTREDPGDVLVARDSLSLADLP 122 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA---HA----------- 168 S +GT S RR + R DI ++D RG + TR+ ++ A HA Sbjct: 123 AGSRLGTGSPRRARQIAVARPDIELVDIRGNVPTRVGRVKGLAAVAEHAGLPSGKAAEDL 182 Query: 169 --ILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE------LVKV 220 ++LA AG++RL + I + L P+ GQGA+ +ET + E ++K Sbjct: 183 DGVVLARAGLRRLGMDDAITDSLE-GTVIPAGGQGALALETRSELLDSDEGRNFAQILKF 241 Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAI 248 ++ E T V+ ERA L L+ C + + Sbjct: 242 VDDEPTRLEVSAERALLRYLEAGCAAPL 269 >gi|298345857|ref|YP_003718544.1| porphobilinogen deaminase [Mobiluncus curtisii ATCC 43063] gi|304390438|ref|ZP_07372391.1| hydroxymethylbilane synthase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315657641|ref|ZP_07910523.1| hydroxymethylbilane synthase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298235918|gb|ADI67050.1| porphobilinogen deaminase [Mobiluncus curtisii ATCC 43063] gi|304326194|gb|EFL93439.1| hydroxymethylbilane synthase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315492113|gb|EFU81722.1| hydroxymethylbilane synthase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 373 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 86/268 (32%), Positives = 134/268 (50%), Gaps = 28/268 (10%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++P IGTR S LAL +TR+ D+ + H + + +T+GD I +L +GG G Sbjct: 8 ERPLVIGTRASALALT---QTRAVASDLEQRGLH-VQVQTFTTEGD-INRASLASLGGVG 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F + L+ G D VHS KD+PT + GL ++A RED DV ++ + SL DL Sbjct: 63 VFAAALRVALLEGHCDLVVHSLKDLPTVPVDGLVVAATPTREDPGDVLVARDSLSLADLP 122 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA-------------- 168 S +GT S RR + R DI ++D RG + TR+ ++ A A Sbjct: 123 AGSRLGTGSPRRARQIAVARPDIELVDIRGNVPTRVGRVKGLAAVAEQAGLPSGKAAEDL 182 Query: 169 --ILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE------LVKV 220 ++LA AG++RL + I + L P+ GQGA+ +ET + E ++K Sbjct: 183 DGVVLARAGLRRLGMDDAITDSLE-GTVIPAGGQGALALETRSELLDSDEGRNFAQILKF 241 Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAI 248 ++ E T V+ ERA L L+ C + + Sbjct: 242 VDDEPTRLEVSAERALLRYLEAGCAAPL 269 >gi|146303002|ref|YP_001190318.1| porphobilinogen deaminase [Metallosphaera sedula DSM 5348] gi|189028093|sp|A4YD92|HEM3_METS5 RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|145701252|gb|ABP94394.1| hydroxymethylbilane synthase [Metallosphaera sedula DSM 5348] Length = 290 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 90/265 (33%), Positives = 136/265 (51%), Gaps = 13/265 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI R S L+L E ++ + + I + TK D N+ L EIG KG+F Sbjct: 3 IRIAARGSKLSLKQV-EIVTTYLQAKG---YETEFIEIKTKADLFGNKPLHEIG-KGVFE 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+ + ++ G D AVHS KDM ++L GL++ A RE+ DV +S +L++L S Sbjct: 58 KEVNEAVLQGRADIAVHSMKDMSSELPPGLELLATPKRENPVDVLVSEL--NLEELPEKS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGT SLRR L R D+ V + RG ++TRL K +++ I+LA AG++RL E V Sbjct: 116 RIGTGSLRRANFLKVVRPDLVVENIRGNVDTRLRKYRDHEYDGIILAEAGLRRLGVE-VK 174 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L++E F P P QG I + V +PK L + +N T E+ + + G C Sbjct: 175 RFPLDVESFTPEPNQGIIAV---VGSPKFLGLFQELNDTGTMKEALAEKETVKVVGGGCH 231 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG 270 S + + L +GI S+G Sbjct: 232 SPLGVLFRLEDDVL--HGIASYSNG 254 >gi|91978235|ref|YP_570894.1| porphobilinogen deaminase [Rhodopseudomonas palustris BisB5] gi|91684691|gb|ABE40993.1| hydroxymethylbilane synthase [Rhodopseudomonas palustris BisB5] Length = 330 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 92/310 (29%), Positives = 152/310 (49%), Gaps = 28/310 (9%) Query: 3 KKPFRIGTRCSPLALAH----AFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 K P RIGTR S +ALA A + R++ ++ ++ I+ T GD L Sbjct: 6 KIPVRIGTRKSVMALAQTEDIAKQLRAAASEL------DVEIVKFETVGDSDQISKLLPH 59 Query: 59 GGKG-LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQ 116 GGKG F EI +I+G++ A+HS KDMP + GL I A L R+ D + Sbjct: 60 GGKGGAFVAEIRAAVIAGQLQAAMHSLKDMPGNEDTPGLVIGATLARDPATDALVLREGL 119 Query: 117 SLKDL----ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK------- 165 +L++L IGT+++RR A R +++VI FRG +TR+ KL+ + Sbjct: 120 TLEELKKSRGKGYTIGTNAVRRAAYAKRLFPEVNVIHFRGAADTRIRKLDAREKQRLPDG 179 Query: 166 -----AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220 A A+++A AG++R+ I ++ PS GQG + +E V++ + + + + Sbjct: 180 GEVGPADALIMARAGLERVGFVDRIVHDFTPQEMLPSAGQGIVAVECAVDDWQTRRYLAM 239 Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 I+ + + ER L L+G C S +A + G+ + + VL +G +F E +R+G Sbjct: 240 IDDPKSRLCCDAEREVLWVLNGHCNSPMAAHSTVNGAEMTLHASVLDEEGGLFIETTRSG 299 Query: 281 NRCDAINIGR 290 +GR Sbjct: 300 PANRPRELGR 309 >gi|71005230|ref|XP_757281.1| hypothetical protein UM01134.1 [Ustilago maydis 521] gi|46096460|gb|EAK81693.1| hypothetical protein UM01134.1 [Ustilago maydis 521] Length = 770 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 89/245 (36%), Positives = 124/245 (50%), Gaps = 21/245 (8%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG--LFTEEIEKKLIS 74 L H F+T S + PH I +ST GD+ L IGG+G ++T+E+E L Sbjct: 234 LLHGFQTTSEA----PLRPHAFPITSMSTAGDQNLRSPLYVIGGEGKAIWTKELEVALEQ 289 Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGTSS 131 G +D VH KD+PT L +GL+++A L RED RD + + L +L + SVIGTSS Sbjct: 290 GAVDAIVHCLKDVPTALPQGLELAAVLEREDPRDALVVKAGLPYKVLDELPVGSVIGTSS 349 Query: 132 LRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEIL 189 +RR A L R + D RG I TRL KL+ N A++LA AG+ RL I L Sbjct: 350 VRRVAQLRRRYPHLVFSDVRGNINTRLAKLDAPNGPYTALILAAAGLVRLNMHARITAFL 409 Query: 190 NIEDFPPSPGQGAICIE----------THVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + S GQG++ IE T + + +EL++ I ER+ L E Sbjct: 410 SSPVLLHSVGQGSLAIEVRTPPEGADPTTNRDARIRELIRSIGDWRATFRAEAERSLLKE 469 Query: 240 LDGSC 244 L+G C Sbjct: 470 LEGGC 474 >gi|68483293|ref|XP_714388.1| likely phorphobilinogen deaminase Hem3p [Candida albicans SC5314] gi|68483380|ref|XP_714346.1| likely phorphobilinogen deaminase Hem3p [Candida albicans SC5314] gi|10720013|sp|O94048|HEM3_CANAL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|3859661|emb|CAA21999.1| Porphobilinogen deaminase [Candida albicans] gi|46435905|gb|EAK95277.1| likely phorphobilinogen deaminase Hem3p [Candida albicans SC5314] gi|46435949|gb|EAK95320.1| likely phorphobilinogen deaminase Hem3p [Candida albicans SC5314] gi|238883889|gb|EEQ47527.1| porphobilinogen deaminase [Candida albicans WO-1] Length = 340 Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 92/281 (32%), Positives = 146/281 (51%), Gaps = 20/281 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IG R S LA+ + + + D P + I+ LST GD++ + L GGK L+T Sbjct: 14 VQIGGRKSKLAVVQSEIVKKVIEDT--FPNLSCSILALSTLGDKVQTQPLYTFGGKSLWT 71 Query: 66 EEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117 +E+E L+ ++D VHS KDMPT L + ++ RED RD + + +S Sbjct: 72 KELEILLLDSVDEFPKLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAIVMKQGSSYKS 131 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAG 175 LKDL +++GTSS+RR + L++ + RG I+TRLNKL+ NN+ ++LA AG Sbjct: 132 LKDLPAGAIVGTSSIRRSSQLIKNYPHLRFESVRGNIQTRLNKLDQPNNEYCCLILASAG 191 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC--E 233 + RL I L+ D + GQGA+ IE + + ++K I ED ++ C E Sbjct: 192 LIRLGLGHRITSYLD--DMYYAVGQGALGIEIRKGDDNIKSILKKI--EDPIATICCLAE 247 Query: 234 RAFLAELDGSCKSAIAGFAYCKGS--TLYFYGIVLASDGKI 272 R+ + L+G C + + S L GI+++ DG + Sbjct: 248 RSLMRYLEGGCSVPLGVHSDYNESKQELTLKGIIVSPDGTV 288 >gi|150020602|ref|YP_001305956.1| porphobilinogen deaminase [Thermosipho melanesiensis BI429] gi|149793123|gb|ABR30571.1| porphobilinogen deaminase [Thermosipho melanesiensis BI429] Length = 279 Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 89/260 (34%), Positives = 137/260 (52%), Gaps = 13/260 (5%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 R+GTR S LAL + L ++ +P + I P+ TKGDR+ + +IGGKG+F Sbjct: 4 RVGTRKSKLALIQTQLVVNKLKEL--LPNIDFEITPVVTKGDRLKT-PIDKIGGKGVFVS 60 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 +IEK ++ ++D A+HS KD+P+K+ L +++ L RE DVFI ++ +L + Sbjct: 61 DIEKLILDDKLDIAIHSMKDLPSKIPDKLFLTSVLKRECPNDVFIGK--ENFFNLKKGAK 118 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGTSS RR + R DI ++ RG ++TR+ K+ + I++A AG+ RL + I Sbjct: 119 IGTSSKRRALQINMLRPDIEIVPIRGNVDTRIKKI--GELDGIVIAAAGVIRLGLKDKIT 176 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDGSCK 245 + E P+P QG + +E K E +K VI T ER L+ L+ C Sbjct: 177 NLFEFEKIVPAPCQGILALEFSEKFLKPFEEIKDVIVDPKTEVETQIERKILSLLNFDCN 236 Query: 246 SAIAGFAYCKGS---TLYFY 262 + GF YC S T Y + Sbjct: 237 TPF-GF-YCDASKKVTCYMF 254 >gi|238578919|ref|XP_002388878.1| hypothetical protein MPER_12057 [Moniliophthora perniciosa FA553] gi|215450574|gb|EEB89808.1| hypothetical protein MPER_12057 [Moniliophthora perniciosa FA553] Length = 350 Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 88/247 (35%), Positives = 128/247 (51%), Gaps = 18/247 (7%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 ++T GD+ ++ L +GGK L+T+E+E L+ E+D VHS KD+PT L +G I L Sbjct: 52 MTTAGDKNQSQALYLLGGKALWTKELEVALLEREVDMLVHSLKDVPTVLPEGCMIGGILE 111 Query: 103 REDIRDVFISHTA-----QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETR 157 RED D + +SL DL SV+GTSS+RR A L R + D RG + TR Sbjct: 112 REDPVDSLVVKRGYEDKWKSLDDLPEGSVVGTSSVRRVAQLKRNYPGLKFQDVRGNLNTR 171 Query: 158 LNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPS----PGQGAICIETHVNN 211 + KL+ + AI+LA AG+ RL + + L + PP+ QGA+ +E N+ Sbjct: 172 MAKLDAPDGPYAAIILAKAGMVRLG----MGDRLTCDLAPPTLFHAVSQGALAVEIRNND 227 Query: 212 PKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGS---TLYFYGIVLAS 268 +A EL K I H++T + ERA L L+G C + ++ K L G V + Sbjct: 228 KEALELCKRITHQNTAWKCSAERACLRVLEGGCSVPVGVSSFLKHDKELVLEISGCVTSL 287 Query: 269 DGKIFHE 275 DG E Sbjct: 288 DGSTHVE 294 >gi|291295115|ref|YP_003506513.1| porphobilinogen deaminase [Meiothermus ruber DSM 1279] gi|290470074|gb|ADD27493.1| porphobilinogen deaminase [Meiothermus ruber DSM 1279] Length = 299 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 77/231 (33%), Positives = 122/231 (52%), Gaps = 1/231 (0%) Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 E + + L E+D AV+S K +PT+ GL++ A R + R+ + +A+ L+DL Sbjct: 50 AEALRQALGKREVDIAVYSLKYLPTQEAPGLRLVAVPKRMEPREALVGRSAKRLEDLPKG 109 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+G +SLRRKA LL R D++V D G ++ RL+ L + A+++ A + RL Sbjct: 110 AVVGVNSLRRKAQLLAHRPDLNVCDLEGDVDDRLSALGTGEYDAMIIGAASLLRLDLRNR 169 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I ++++ E P+PGQGA+ +E + A+EL +NH ++ ERAFL L Sbjct: 170 IDQLIDPEVMLPAPGQGALGLEVRQGDDWAEELAYSLNHRASFVRTTAERAFLRALGAGD 229 Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 A A A +G TL G+V + DG G+ +A +G D AQ Sbjct: 230 GCAAAALATLEGDDTLLLQGVVASPDGHELIRAEIEGDAEEAAELGHDLAQ 280 >gi|146338934|ref|YP_001203982.1| porphobilinogen deaminase [Bradyrhizobium sp. ORS278] gi|146191740|emb|CAL75745.1| porphobilinogen deaminase [Bradyrhizobium sp. ORS278] Length = 325 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 94/303 (31%), Positives = 144/303 (47%), Gaps = 20/303 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR-ITNRTLTEIGGKGLF 64 FRIGTR S +ALA E L IP +I I+ T GD T++ LT G G F Sbjct: 4 FRIGTRKSTMALAQTEEIARRLQ--AAIPSLDIEIVKFETTGDSDQTSKLLTHGGKGGAF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 EI + ++ G++ A+HS KDMP + GL I+A L R+ DV + +L+D Sbjct: 62 VAEIRRAMLDGKLHAAMHSLKDMPGNEETPGLVIAALLSRDPPGDVLVLRKGLALEDFRK 121 Query: 124 HS----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK------------AH 167 IGT+++RR A R +I FRG +TR+ KL+N + A Sbjct: 122 DGGRGFKIGTNAVRRAAYARRLFPHAELIHFRGAADTRIRKLDNGELQRMPDGGAVGPAD 181 Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227 A+++A +G++R+ + D P+ GQG + +E ++ + + ++ ++ Sbjct: 182 ALIMARSGLERVGLSDRASHEFPVADMLPAVGQGIVAVECPASDFETRRILATVDDAAAR 241 Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 + ER L L+G C S IAGF+ G+ + VL DG F E R G Sbjct: 242 TCADAEREVLWVLNGHCNSPIAGFSTIDGAQMTLTASVLDEDGGRFIEAQRTGPADRPRE 301 Query: 288 IGR 290 +GR Sbjct: 302 LGR 304 >gi|268324707|emb|CBH38295.1| porphobilinogen deaminase [uncultured archaeon] Length = 290 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 85/266 (31%), Positives = 136/266 (51%), Gaps = 12/266 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LAL + L ++ I + + GD +T+R L E+ G+F ++ Sbjct: 3 VGTRGSNLALVQTKKVCERLSELG----VECEIKTVQSLGDVMTDRGLYEMPTIGVFVKK 58 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 ++ L+ +ID AVHS KDMP++ + L SA LPR+ D +S L D+ +VI Sbjct: 59 LDMMLLDAKIDIAVHSMKDMPSEREEELDTSAVLPRDSPYDALVSR--YRLDDMPEGAVI 116 Query: 128 GTSSLRRKALLLRWRSD----ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 GTSS+RR+ L + + +++ D RG ++TR+ K + +++LA AG +RLK + Sbjct: 117 GTSSVRRRYQFLNYVGERGVKVTIKDIRGNVDTRIAKFRRGEYDSVILAEAGFERLKLD- 175 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + E L+ + F PSP QG I + K E++K I+ +T E L + G Sbjct: 176 IEYERLDRDPFVPSPRQGIIAVVAR-RGSKESEILKQIDDSETRIEAEVEEEVLKVIGGG 234 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASD 269 C + A KG ++ V ASD Sbjct: 235 CSLPVGVHATAKGGSVELAVYVAASD 260 >gi|156101752|ref|XP_001616569.1| porphobilinogen deaminase [Plasmodium vivax SaI-1] gi|148805443|gb|EDL46842.1| porphobilinogen deaminase, putative [Plasmodium vivax] Length = 341 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 87/320 (27%), Positives = 145/320 (45%), Gaps = 69/320 (21%) Query: 47 GDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI 106 GD I ++ + GGKG+FT+E++++LI + VHS KD+P +L + +Q+S +L R+ I Sbjct: 2 GDHILDKKVGLFGGKGIFTKELDEQLIKKNVHICVHSLKDVPMELPEHVQLSCFLKRDTI 61 Query: 107 RDVFISHTAQSLKDLALHSV---------------------------------------I 127 D F+S +L+D+ + I Sbjct: 62 NDAFLSVKYATLEDMNKRKMANKVEEESDQEKGTIQQMTNQGLKRDNCEGDKCTNFIPTI 121 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR + + +++V + RG I TR+ KL N + AI++A G++RL +KV++ Sbjct: 122 GTSSLRRSSQIKYTYKNVAVKNVRGNINTRIAKLCNGQYDAIIIAKCGLERLLTKKVVRN 181 Query: 188 I-------------LNIEDFP-----------------PSPGQGAICIETHVNNPKAQEL 217 I LN D P+ QG I + +H N+ + Sbjct: 182 IIRGKGKVPPEKFLLNHNDMETNLRLLRIQQINRRTIYPALCQGIIAVTSHKNDVDTSNI 241 Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277 +K IN E N ER+FL +++G+C I G+A G + F ++ + G+ + V Sbjct: 242 LKNINDEKAQIMANVERSFLYQIEGNCMMPIGGYAQIVGGEIVFNAVINDTHGREKYHVR 301 Query: 278 RNGNRCDAINIGRDAAQYIR 297 G + NI AA ++ Sbjct: 302 EVGTVQNCNNIAAMAATKMK 321 >gi|152964587|ref|YP_001360371.1| porphobilinogen deaminase [Kineococcus radiotolerans SRS30216] gi|151359104|gb|ABS02107.1| porphobilinogen deaminase [Kineococcus radiotolerans SRS30216] Length = 326 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 87/259 (33%), Positives = 141/259 (54%), Gaps = 9/259 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSS-LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +P R+GTR S LA T+SS + D+ + + ++ ++T+GD + L +IGG G Sbjct: 3 RPLRLGTRRSALAT-----TQSSWVADLLRRGGSPVELVEITTRGD-VDRAPLAQIGGTG 56 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F + L++GE+D AVHS KD+PT GL ++A RED RDV ++ +L DL Sbjct: 57 VFVSALRDALLAGEVDLAVHSLKDLPTSAADGLALAAVPGREDPRDVLVAAGGATLADLP 116 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GT S RR+ALLL R D+ V+ RG ++TR+ + A++LA AG+ R + Sbjct: 117 RGARVGTGSPRRRALLLALRPDLDVVAVRGNVDTRIGFATGGELDAVVLAAAGLARTGRL 176 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 E+ E F P+PGQGA+ +E ++ + + ++ +V ER LA L+ Sbjct: 177 HEASELFAPEVFVPAPGQGALAVECRADDAEVLAALAALDVPAVRWAVAAERQVLASLEA 236 Query: 243 SCKSAIAGFAYCKGSTLYF 261 C + + A+ G L+ Sbjct: 237 GCSAPVG--AHAAGGVLHV 253 >gi|254577639|ref|XP_002494806.1| ZYRO0A10098p [Zygosaccharomyces rouxii] gi|238937695|emb|CAR25873.1| ZYRO0A10098p [Zygosaccharomyces rouxii] Length = 327 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 96/312 (30%), Positives = 151/312 (48%), Gaps = 16/312 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG R S LA+ + E L++ K P + L T GD+ ++ L GGK L+T Sbjct: 5 IRIGGRQSQLAIVQS-ELVKHLIE-QKFPDITCSVFALQTLGDQQQSKPLYSFGGKALWT 62 Query: 66 EEIEKKLISGE----IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 +E+E L + +D VHS KDMPT L G ++ R D D + ++L Sbjct: 63 KELEDLLYDEDDNRKLDIIVHSLKDMPTTLPDGFELGGITERVDPSDCLVMPQGSPHKNL 122 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176 L SV+GTSS+RR A L R + RG + TR+ KL++ N I+LA AG+ Sbjct: 123 DTLPAGSVVGTSSVRRSAQLKRKYPHLRFESIRGNLHTRIRKLDDPQNDYQCIILASAGM 182 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 KRL I + + GQGA+ IE + + ++++ + H++T ER Sbjct: 183 KRLGLGYRITNTFDSSVMYHAVGQGALGIEIRAQDKEMKKILDAVCHKNTTVCCLAERQL 242 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFY--GIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 + L+G C I + +T Y + GIV++ DGK E+++ D I RD+ + Sbjct: 243 MRSLEGGCSVPIGVGSRYDETTGYLHLRGIVVSVDGKQAVELNQELAINDVI---RDSIE 299 Query: 295 YIRFISNKNVFN 306 + ++ K + N Sbjct: 300 CGKLLAEKMISN 311 >gi|259489684|tpe|CBF90157.1| TPA: hydroxymethylbilane synthase, putative (AFU_orthologue; AFUA_5G11760) [Aspergillus nidulans FGSC A4] Length = 347 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 94/291 (32%), Positives = 145/291 (49%), Gaps = 14/291 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K F IGTR S LAL ++L + + P + I T GD+ T L + K Sbjct: 15 QKIFTIGTRKSKLALLQTDLVLAALKE--RFPDYTFKIHSRETAGDQNTTIALRDFTTKN 72 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 L+T+E+E L +G +D VHS KD+PT L + + RED RD + SL Sbjct: 73 LWTQELEDLLEAGSVDLIVHSLKDVPTLLPTSCTLGPMMKREDSRDGLVIKKGLPNMSLA 132 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177 ++ SV+GTSS+RR A L R + V+D RG I TRL KL+ ++ ++LA AG+ Sbjct: 133 EMPAGSVVGTSSIRRTAQLARKYPHLKVMDVRGNIGTRLAKLDAEDSPYTCLILAAAGLL 192 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 RL I + L+ + + GQGA+ IE + ++++ I H++T + ER+ Sbjct: 193 RLGLGDRIYQYLDSRNAGMLYAVGQGALGIEIRKGDKAMEDILNTIGHKETTFACLAERS 252 Query: 236 FLAELDGSCKSAIA----GFAYCKGST-LYFYGIVLASDGKIFHEVSRNGN 281 L L+G C + + GS+ L +V++ DG EV +G Sbjct: 253 LLRTLEGGCSAPLGVETEWIQDTNGSSKLRMRSVVVSVDGSEHAEVEIDGT 303 >gi|227541639|ref|ZP_03971688.1| porphobilinogen deaminase [Corynebacterium glucuronolyticum ATCC 51866] gi|227182607|gb|EEI63579.1| porphobilinogen deaminase [Corynebacterium glucuronolyticum ATCC 51866] Length = 290 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 82/302 (27%), Positives = 145/302 (48%), Gaps = 17/302 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ ++ + ++T GD+ N + + G G+FT Sbjct: 3 LRIGTRGSKLATTQAGHVRDALIRAG----YDAELTIITTPGDK--NLSPVQKIGVGVFT 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + + EID AVHS KD+PT +GL + Y RE + I+ +L L + Sbjct: 57 QALREAMDRDEIDIAVHSCKDLPTGQPEGLA-TIYPVRETPCEALIARDGLTLDQLPEGA 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT + RR + L R D+ + RG ++TR+ K+ + + A++LA+AG+ R+ + Sbjct: 116 KVGTGAPRRISQLKALRPDLDIRPLRGNVDTRMGKVTSGELDAVILAHAGLTRIGRGDEA 175 Query: 186 KEILNIEDFPPSPGQGAICIE--THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ + P+P QG + +E THV+ + +I+ T S ERA L+ L Sbjct: 176 TQVFDPTYLMPAPAQGILAVESRTHVDA-----ISTLIDDHATL-SAQAERAVLSTLQAG 229 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C + +A ++ G + A DG ++ D + +G A+ +R + Sbjct: 230 CTAPLAAYSTVSGDEITLTAGAFALDGS--KQIVETATGTDPVALGTSVAEKLRACGAEE 287 Query: 304 VF 305 + Sbjct: 288 II 289 >gi|209886240|ref|YP_002290097.1| porphobilinogen deaminase [Oligotropha carboxidovorans OM5] gi|209874436|gb|ACI94232.1| porphobilinogen deaminase [Oligotropha carboxidovorans OM5] Length = 338 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 93/308 (30%), Positives = 142/308 (46%), Gaps = 20/308 (6%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG- 62 K RIGTR S +ALA E L P ++ I+ T GD+ L ++GGKG Sbjct: 12 KAMRIGTRKSVMALAQTSEIARQLTAAD--PALDVEIVKFETTGDQDQTGKLLDLGGKGG 69 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 F +I + G ++ A+HS KDMP + GL I A L R+ D + +L DL Sbjct: 70 AFVAQIRDAVREGRLEAAMHSLKDMPGNEDTPGLVIGATLTRDPPTDALVVRHGVTLADL 129 Query: 122 ALHS----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK------------ 165 IGT+++RR A + R + +I FRG +TR+ KL+N + Sbjct: 130 RRTGGKGFKIGTNAVRRAAYVRRLFPECEIIHFRGAADTRIRKLDNGEKQRLPEGGEVGP 189 Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED 225 A A+++A AG++R+ I + ++ P+ GQG + +E ++ + I+ Sbjct: 190 ADALVMAQAGLERVGCADRIAHCFSPDEILPAVGQGIVAVECAASDWCTLARLAQIDDPV 249 Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA 285 + ER L L+G C S IAG+A +G + VL F EV+R G Sbjct: 250 SRCCAAAEREVLWVLNGHCNSPIAGYAIVEGDDVLLKAAVLDEANDHFIEVTRRGPASRP 309 Query: 286 INIGRDAA 293 +GR A Sbjct: 310 RELGRAVA 317 >gi|242763889|ref|XP_002340664.1| hydroxymethylbilane synthase, putative [Talaromyces stipitatus ATCC 10500] gi|218723860|gb|EED23277.1| hydroxymethylbilane synthase, putative [Talaromyces stipitatus ATCC 10500] Length = 335 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 97/282 (34%), Positives = 142/282 (50%), Gaps = 14/282 (4%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+K F IGTR S LALA + +L + P + I T GDR ++ K Sbjct: 9 ERKTFNIGTRKSKLALAQTYMVVDALK--KEYPQYEFNIKSKDTAGDRDKITAFKDMQTK 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 L+TEE+E+ LI G++D VHS KD+PT L + LPRED RDV I SL Sbjct: 67 NLWTEELEELLIGGQLDFIVHSLKDVPTLLPPTCALGGVLPREDPRDVLIVKPGLPYTSL 126 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGI 176 ++ SV+GTSS+RR A L + V RG I+TRL KL+ + I+LA AG+ Sbjct: 127 AEIPAGSVVGTSSIRRTAQLAMKFPHLKVQSLRGNIDTRLAKLDGEDSPYTCIILAAAGL 186 Query: 177 KRLKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R I + L+ + GQGAI IE ++ E++ + + T+ V ER Sbjct: 187 LRTGMGHRITQYLDSRSGSLLYAVGQGAIGIEVRSDDGLVLEMLNKVGDQKTFKEVLAER 246 Query: 235 AFLAELDGSCKSAIA----GFAYCKGST-LYFYGIVLASDGK 271 + L ++G C + + +G+T L+ I+++ DGK Sbjct: 247 SLLRTIEGGCSAPLGVESEWINEVEGTTKLHVRSIIVSVDGK 288 >gi|118576540|ref|YP_876283.1| porphobilinogen deaminase [Cenarchaeum symbiosum A] gi|118195061|gb|ABK77979.1| porphobilinogen deaminase [Cenarchaeum symbiosum A] Length = 311 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 91/291 (31%), Positives = 134/291 (46%), Gaps = 5/291 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 + +GTR S L+LA +L + + P + + T+GD +R L I KG+F Sbjct: 4 YTVGTRGSRLSLAQTGHVLDALKEAN--PEDEYKVRRIKTQGD-TDDRPLFAIDQKGIFE 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EI++ + G D AVHS KD+PT+L GL ++ R DV +S L L + Sbjct: 61 KEIDRAVSEGGADFAVHSLKDVPTELAPGLVLACVPRRAAANDVLVSPGGSGLGSLPRGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR + R RSD+ V RG IETR+ K+ A++LA AGI RL + V Sbjct: 121 TVGTSSLRRAVQVGRSRSDLHVKPVRGNIETRIAKVGAGY-DAVVLAEAGISRLGLD-VK 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L E F PSPGQG++ + + ++ I + ERA + C+ Sbjct: 179 YAALPEESFAPSPGQGSLALVARSGDAGTISMLNRIEDAASRAEAEAERALSERIGSGCR 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + A G L + DG V +G R +G A + Sbjct: 239 FPVGALARSAGELLTIRAEAFSVDGSRSVSVQASGPRGSPRKVGESAGNEM 289 >gi|13541465|ref|NP_111153.1| porphobilinogen deaminase [Thermoplasma volcanium GSS1] gi|25453027|sp|Q97B26|HEM3_THEVO RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|14324849|dbj|BAB59775.1| hydroxymethylbilane synthase [Thermoplasma volcanium GSS1] Length = 297 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 82/258 (31%), Positives = 133/258 (51%), Gaps = 22/258 (8%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LA+A A SSL + + I+ + GD T + IG G+F Sbjct: 3 IKIGTRPSNLAVAQANMVASSLEAIG----IDTEIVKHRSAGDIDTKNPIYSIGKTGVFV 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +++ ++ GEID AVHSAKD+P+++ L I+A L R D +S L+ L + + Sbjct: 59 QDLNNMILRGEIDVAVHSAKDIPSEIENRLTIAATLKRGSFNDALVSKY--DLRSLPISA 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS+RR L R D+ + RG IETR+ K++ AI++A A I+RL Sbjct: 117 KVGTSSIRRIFQLKYARQDLKFENIRGNIETRIAKMSELGLDAIVMAEAAIQRLG----- 171 Query: 186 KEILNIE-------DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 LN+E F P+P QG I + + +++++ IN E+T++ + ER+ + Sbjct: 172 ---LNVEYSKLDENKFVPAPNQGIIAVVSK-KEGTVRKILEEINDENTFEEMQIERSVVQ 227 Query: 239 ELDGSCKSAIAGFAYCKG 256 +L C + + + G Sbjct: 228 QLKLGCSTPVGILSRPSG 245 >gi|331230279|ref|XP_003327804.1| porphobilinogen deaminase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309306794|gb|EFP83385.1| porphobilinogen deaminase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 461 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 96/295 (32%), Positives = 137/295 (46%), Gaps = 32/295 (10%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LAL A + I +ST GD + L +GGK ++T+E Sbjct: 69 IGTRNSKLALVQAESVEREINKRFSSDQIKTEIKSMSTSGDENLLKPLYLLGGKSVWTKE 128 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALH 124 +E L++G ID VHS KD+PT L G ++++ + RED RD I +L L Sbjct: 129 LEFNLLNGSIDLIVHSLKDVPTSLPAGCELASVMLREDPRDALIIRNGLPFTNLSQLPAG 188 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKE 182 S+IGTSS+RR A L R +++ D RG ++TR KL+ ++ I+LA AG+KR+ Sbjct: 189 SIIGTSSVRRVAQLRRRFPNLAFQDIRGNLQTRFKKLDASDSPYTGIILAVAGLKRIGLA 248 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVN-----NPKAQE------------LVKVINHED 225 + I L D + GQGAI IE N +E LVK + Sbjct: 249 ERITSYLEPPDLYHAVGQGAIGIEIRTPPEIKLNETVEETILRERATTVRRLVKSLEDWR 308 Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFA----------YCKGSTLYFYGIVLASDG 270 T S ERA L L+G C + + + + L G+V + DG Sbjct: 309 TALSCEAERALLRRLEGGCSVPVGVTSSLVDLPMPCPWAPKARLTLTGVVTSVDG 363 >gi|148693633|gb|EDL25580.1| mCG10727, isoform CRA_a [Mus musculus] Length = 371 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 87/266 (32%), Positives = 127/266 (47%), Gaps = 29/266 (10%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT Sbjct: 60 IRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKSLFT 117 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L E+D VHS KD+PT L G I A RE+ D + H Sbjct: 118 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHP----------K 167 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKV 184 IG ++ RG + TRL KL+ + AI+LA AG++R+ + Sbjct: 168 FIGK----------------TLETLRGNLNTRLRKLDELQEFSAIVLAVAGLQRMGWQNR 211 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+G C Sbjct: 212 VGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRHLEGGC 271 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG 270 +A K LY G V + DG Sbjct: 272 SVPVAVHTVMKDGQLYLTGGVWSLDG 297 >gi|326428753|gb|EGD74323.1| uroporphyrinogen decarboxylase [Salpingoeca sp. ATCC 50818] Length = 737 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 102/315 (32%), Positives = 151/315 (47%), Gaps = 38/315 (12%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++ + IGTR S LAL A L V K P H I + T GD+ L + G G Sbjct: 374 QRVYTIGTRGSVLALWQAHYVLDRL--VKKYPTHRFRIKVVDTAGDKDLTTALDKFGTTG 431 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQ--S 117 +FT+ +E+ L+SGE+DC VHS KD+P+ L +++A R D RD + H + S Sbjct: 432 VFTDALERALVSGEVDCVVHSLKDVPSTLHPSTRLAAISERHDPRDCVVFNPRHNGRYSS 491 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAG 175 + DL SV+GTSS RR+A L R ++ RG ++TRL KL++ N A++LA AG Sbjct: 492 IADLPPGSVLGTSSARRRAFLARAYPSLTFKHVRGNVKTRLRKLDDPANGYDALVLASAG 551 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK---------------------- 213 ++RL E + E L+++ P + GQ A+ ++ + Sbjct: 552 LERLNMEARVGEKLSVDVVPHAVGQAALGVQVRCSAKPGPHGGEGGDDDDDDGDKDAAVL 611 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGK 271 A+ L + +T + ER FL L G C IA + T + G V + DGK Sbjct: 612 AEMLHASVQCNETALVCSAERGFLRSLGGGCSLPIAVRSQRDADTGRIVLCGNVCSVDGK 671 Query: 272 IFHEVSRNGNRCDAI 286 SR CDA+ Sbjct: 672 TL--ASRT---CDAV 681 >gi|119480587|ref|XP_001260322.1| porphobilinogen deaminase [Neosartorya fischeri NRRL 181] gi|119408476|gb|EAW18425.1| porphobilinogen deaminase [Neosartorya fischeri NRRL 181] Length = 363 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 76/196 (38%), Positives = 109/196 (55%), Gaps = 7/196 (3%) Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---Q 116 GK L+T E+E L++G++ C VHS KDMPT L + A RED D + Sbjct: 84 GKSLWTNELELDLVAGKVHCLVHSLKDMPTTLPPHCLLGAVPEREDCSDAVCMRSDLKFT 143 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYA 174 S+ L S++GTSS RRKAL+ R + V++ RG ++TRL KL+ +++ ILLA A Sbjct: 144 SIDQLPPGSIVGTSSSRRKALVRRNWPHLEVVECRGNVDTRLAKLDAPSSRFSCILLATA 203 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT-WDSVNCE 233 G+ RL I L+ FP + GQGA+ +E + P ELV+ ++H+ + W + E Sbjct: 204 GLLRLGLGHRITHRLDDSIFPYAVGQGALGLEVSTDRPDILELVRHVDHKPSRWRGI-AE 262 Query: 234 RAFLAELDGSCKSAIA 249 RA L L G C S I Sbjct: 263 RAMLRSLQGGCSSPIG 278 >gi|284047684|ref|YP_003398023.1| porphobilinogen deaminase [Acidaminococcus fermentans DSM 20731] gi|283951905|gb|ADB46708.1| porphobilinogen deaminase [Acidaminococcus fermentans DSM 20731] Length = 288 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 84/248 (33%), Positives = 124/248 (50%), Gaps = 9/248 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K + TR S LALA L++ + I ++T GDR L +IGG+G+ Sbjct: 2 KKLIVATRGSRLALAQTHIV-CRLLEEAGVETE---IRTITTAGDRDRIHALVKIGGRGI 57 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F EIE++L+SGE D AVHSAKD+P +L GL I+ + D RD + + L+ Sbjct: 58 FVREIERELLSGEADIAVHSAKDLPYQLASGLVIAGTPSQADPRDALVLLKERKLEA--- 114 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK--K 181 SV+GT S RR + R ++ D RG + TRL+KL + AI+LA AGI+RL Sbjct: 115 GSVVGTGSPRRIREISRVLPELVFRDIRGNVTTRLHKLERGEYDAIVLAMAGIQRLALDM 174 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ L+ E P+ QG I +E + + L++ I+ +TW ER + Sbjct: 175 EQFQIRPLSTEQVIPAGCQGIIGVECRQKDRELVRLLQQISDPETWRRFQWERQLFTSMK 234 Query: 242 GSCKSAIA 249 C + Sbjct: 235 VDCSRPVG 242 >gi|170085353|ref|XP_001873900.1| predicted protein [Laccaria bicolor S238N-H82] gi|164651452|gb|EDR15692.1| predicted protein [Laccaria bicolor S238N-H82] Length = 342 Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 90/276 (32%), Positives = 140/276 (50%), Gaps = 16/276 (5%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 ++T GD+ ++ L +GGK L+T+E+E L +D VHS KD+PT L G + L Sbjct: 48 MTTAGDKNQSQALYLLGGKALWTKELEVALKEHHVDMLVHSLKDVPTTLPDGCVLGGILE 107 Query: 103 REDIRDVFISHTAQ---SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159 RED D + + SL +L SVIGTSS+RR A L R + +D RG + TRL Sbjct: 108 REDPVDSLVVKHGERWKSLDELPSGSVIGTSSVRRIAQLKRKYPHLKFMDVRGNLNTRLA 167 Query: 160 KLNNNKA--HAILLAYAGIKRLKKEKVIKEILNIEDFPPS----PGQGAICIETHVNNPK 213 KL+ + A++LA AG+ RL + + + ++ PP+ QGA+ IE ++ + Sbjct: 168 KLDAPEGPYSALILAKAGLVRLG----MGDRITLDLTPPTLFYAVSQGALGIEVRSDDVE 223 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK-- 271 A EL + + H +T ERA L L+G C + + +G L G V A DG+ Sbjct: 224 ALELCERLTHRETQLKCLAERACLRVLEGGCSVPVGVASQLEGGVLSLSGCVTAIDGESH 283 Query: 272 IFHEVSRN-GNRCDAINIGRDAAQYIRFISNKNVFN 306 + H++ N DA +G A+ + K + + Sbjct: 284 VEHKLEEKVENAEDAEKVGTKLAKILLDSGAKKILD 319 >gi|227487191|ref|ZP_03917507.1| porphobilinogen deaminase [Corynebacterium glucuronolyticum ATCC 51867] gi|227092849|gb|EEI28161.1| porphobilinogen deaminase [Corynebacterium glucuronolyticum ATCC 51867] Length = 290 Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 17/294 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ ++ + ++T GD+ N + + G G+FT Sbjct: 3 LRIGTRGSKLATTQAGHIRDALIRAG----YDAELTIITTPGDK--NLSPVQKIGIGVFT 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + + EID AVHS KD+PT +GL + Y RE + I+ +L L + Sbjct: 57 QALREAMDRDEIDIAVHSCKDLPTGQPEGLA-TIYPVRETPCEALIARDGLTLDQLPEGA 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT + RR + L R D+ + RG ++TR+ K+ + + A++LA+AG+ R+ + Sbjct: 116 KVGTGAPRRISQLKALRPDLDIRPLRGNVDTRMGKVTSGELDAVILAHAGLTRIGRGDEA 175 Query: 186 KEILNIEDFPPSPGQGAICIE--THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ + P+P QG + +E THV+ + +I+ T S ERA L+ L Sbjct: 176 TQVFDPTYLMPAPAQGILAVESRTHVDA-----ISTLIDDHATL-SAQAERAVLSTLQAG 229 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C + +A ++ G + A DG ++ D + +G A+ +R Sbjct: 230 CTAPLAAYSTVSGDEITLTAGAFALDGS--KQIVETATGTDPVALGTTVAEKLR 281 >gi|196004682|ref|XP_002112208.1| hypothetical protein TRIADDRAFT_56012 [Trichoplax adhaerens] gi|190586107|gb|EDV26175.1| hypothetical protein TRIADDRAFT_56012 [Trichoplax adhaerens] Length = 314 Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 89/271 (32%), Positives = 130/271 (47%), Gaps = 37/271 (13%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 ME+ RIGTR S LA+ +L ++H P I I+ + T GDR+ ++ L EIG Sbjct: 4 MEETVVRIGTRKSQLAMIQTHSVVDALREIH--PKARIEIVTMDTIGDRVLDKALPEIGQ 61 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 LFT+++E L +ID +HS KD+P+ L +GL I+ Sbjct: 62 TNLFTKDLEVALTDNKIDLIIHSLKDVPSTLPEGLAIA---------------------- 99 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH-AILLAYAGIKRL 179 A+ +VIGTSSLRR A L R + + RG + TRL KL+ + + A++LA AG++ Sbjct: 100 -AIGNVIGTSSLRRIAQLKRRFPHLKFENVRGNLNTRLKKLDESGIYDALVLAGAGVE-- 156 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 L ++ + GQGA+ IE N+ K L+ D+ ERAFL Sbjct: 157 ---------LTPDECLYAIGQGALGIEIRKNDKKTFSLISAYTDFDSLVCNAAERAFLRF 207 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 LD C I + + L G V + DG Sbjct: 208 LDKGCSVPIGVYTEFTENKLKITGAVFSLDG 238 >gi|150401746|ref|YP_001325512.1| porphobilinogen deaminase [Methanococcus aeolicus Nankai-3] gi|150014449|gb|ABR56900.1| porphobilinogen deaminase [Methanococcus aeolicus Nankai-3] Length = 342 Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 80/259 (30%), Positives = 137/259 (52%), Gaps = 27/259 (10%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LAL ++ L ++++ + I+ T GD+ + L+E+G G+FT+E Sbjct: 46 IGTRGSKLALTQTNYIKALLENLNENIDIEVKIVK--TTGDKDQSSKLSELG-LGVFTKE 102 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS-- 125 ++ K+++ EID AVHS KD+PT + L I++ RE D+ + + + D+ + Sbjct: 103 LDLKMLNNEIDIAVHSLKDVPTVWNENLTIASTPKRESYADLILWNKEDN--DINIEKCN 160 Query: 126 -----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 ++GTSS+RR+ L ++ RG ++TRLNKL N + AI+LA AG+ RLK Sbjct: 161 EKDNIIVGTSSIRRQEFLKIKYPNLKTKLLRGNVDTRLNKLRNKEYDAIILAEAGLNRLK 220 Query: 181 KEKVIKEILNIEDFP-------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 +++ DF P+P QG + + + +N + +++ INH+ T+ E Sbjct: 221 --------MDLSDFNYERLNILPAPAQGVVGVASRTDNKEVISILQKINHKKTFLEALAE 272 Query: 234 RAFLAELDGSCKSAIAGFA 252 R L E G C++ + Sbjct: 273 RYALREYGGGCQAPFGALS 291 >gi|148253694|ref|YP_001238279.1| hydroxymethylbilane synthase [Bradyrhizobium sp. BTAi1] gi|146405867|gb|ABQ34373.1| hydroxymethylbilane synthase [Bradyrhizobium sp. BTAi1] Length = 325 Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 98/303 (32%), Positives = 140/303 (46%), Gaps = 20/303 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR-ITNRTLTEIGGKGLF 64 FRIGTR S +ALA E L IP +I I+ T GD T++ LT G G F Sbjct: 4 FRIGTRKSTMALAQTEEIARRLQ--AAIPSLDIEIVKFETTGDSDQTSKLLTHGGKGGAF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSL----K 119 EI + ++ G + A+HS KDMP + GL I+A L R+ DV + SL K Sbjct: 62 VAEIRRAMLDGRLHAAMHSLKDMPGNEETPGLVIAALLSRDPPGDVLVLRRGLSLDEFRK 121 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK------------AH 167 D IGT+++RR A R +I FRG +TR+ KL+N + A Sbjct: 122 DGGRGFKIGTNAVRRAAYARRLFPQAELIHFRGAADTRIRKLDNGELQRLPDGGAVGPAD 181 Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227 A+++A +G++R+ D P+ GQG + +E + + + ++ I+ Sbjct: 182 ALIMARSGLERVGLSDRASFDFAAADMLPAVGQGIVAVECPSLDWETRRILATIDDGAAR 241 Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 + ER L L+G C S IAGFA G + VL DG F E R G Sbjct: 242 SCADAEREVLWVLNGHCNSPIAGFATIDGDQMTLTASVLDEDGGRFIEAQRAGPADRPRE 301 Query: 288 IGR 290 +GR Sbjct: 302 LGR 304 >gi|47206204|emb|CAF91821.1| unnamed protein product [Tetraodon nigroviridis] Length = 385 Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 97/293 (33%), Positives = 134/293 (45%), Gaps = 56/293 (19%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P ++ I+ +ST GD+I + L++IG K LFT+E+E L E+D VHS KD+PT L Sbjct: 20 PDVHLEIVAMSTTGDKILDTALSKIGEKSLFTKELENALERNEVDLVVHSLKDLPTSLPP 79 Query: 94 GLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDF 150 G I A L RE+ D + H ++L L HSVIGTSSLRR A L + + D Sbjct: 80 GFTIGAVLKRENPHDAVVLHPKNAGKTLDALPAHSVIGTSSLRRAAQLKKRFPHLDFKDI 139 Query: 151 ------------------------RGKIETRLNKLNNNKA-HAILLAYAGIKRLKKEKVI 185 RG + TRL KL+ + AI+LA AG++R+ + I Sbjct: 140 VSSERCFLPVQPGHRCFFLSSRSQRGNLNTRLKKLDEKEDFAAIILAAAGLRRMGWDNRI 199 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL----- 240 +IL ED + GQGA+ +E + E+V V++ DT ERAFL L Sbjct: 200 SQILEPEDCMYAVGQGALAVEVRAKDADILEMVSVLHDPDTVLRCIAERAFLKHLVQHTH 259 Query: 241 -----------------------DGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 +G C +A K S LY G V + DG Sbjct: 260 THTHTHTHTRSLAVAHWNLFCLQEGGCSVPVAVHTKVKDSQLYLTGAVYSLDG 312 >gi|255715311|ref|XP_002553937.1| KLTH0E10604p [Lachancea thermotolerans] gi|238935319|emb|CAR23500.1| KLTH0E10604p [Lachancea thermotolerans] Length = 336 Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 91/280 (32%), Positives = 141/280 (50%), Gaps = 13/280 (4%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E + RIG R S LA+ + E + + + ++ + L T GD++ ++ L GGK Sbjct: 10 EHQIVRIGGRKSKLAVIQSHEVKDLIE--REFSQYSCTVRALKTLGDQVQSKPLYSFGGK 67 Query: 62 GLFTEEIEKKLISGE----IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHT 114 ++T+E+E L + ID VHS KDMPT L G + A + R D D I Sbjct: 68 AVWTKELEDLLYEKDKEKRIDLIVHSLKDMPTLLPDGFLVGAIIKRVDPTDCIIMAKESP 127 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLA 172 ++L DL SV+GTSS+RR A L R + RG IETRL+KL++ I+LA Sbjct: 128 YKTLDDLPDGSVVGTSSIRRSAQLKRKYPKLVFESVRGNIETRLSKLDDPITPFSCIVLA 187 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 AG+ R+K I + L+ + GQGA+ IE ++P +++ IN ++T Sbjct: 188 TAGLLRVKLAHRITQRLDSSVMYHAVGQGALGIEIRSDDPWIAGILQKINDKETAICCFA 247 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDG 270 ER+ + L+G C I + +T L +V++ DG Sbjct: 248 ERSLMRTLEGGCSVPIGVESNYDDTTKQLCLKAVVVSVDG 287 >gi|212529280|ref|XP_002144797.1| hydroxymethylbilane synthase, putative [Penicillium marneffei ATCC 18224] gi|210074195|gb|EEA28282.1| hydroxymethylbilane synthase, putative [Penicillium marneffei ATCC 18224] Length = 336 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 99/281 (35%), Positives = 142/281 (50%), Gaps = 14/281 (4%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+K F+IGTR S LALA +L K P ++ I T GDR ++ K Sbjct: 10 ERKCFKIGTRKSKLALAQTDLVVEALK--KKYPQYDFNIETKDTAGDRDKITAFKDMTSK 67 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 L+TEE+E+ LI G+ID VHS KD+PT L + LPRED RDV I SL Sbjct: 68 NLWTEELEELLIGGQIDFIVHSLKDVPTILPPTCALGGVLPREDPRDVLIVKPGLPYTSL 127 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 +L SV+GTSS+RR A L + V RG IETRL KL+ + I+LA AG+ Sbjct: 128 SELPAGSVVGTSSIRRTAQLAMKFPHLKVQSVRGNIETRLAKLDAEDGPFTCIILAAAGL 187 Query: 177 KRLKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R I + L+ + + GQGAI IE ++ +++ + + T+ V ER Sbjct: 188 LRTGMGGRITQYLDSKSGSLLYAVGQGAIGIEIRSDDALVLDMLNNVGDQKTFKEVLTER 247 Query: 235 AFLAELDGSCKSAIA----GFAYCKGST-LYFYGIVLASDG 270 + L ++G C + + G+T L+ I+++ DG Sbjct: 248 SLLRSIEGGCSAPLGVESEWVEDADGTTKLHVRSIIVSVDG 288 >gi|325108657|ref|YP_004269725.1| hydroxymethylbilane synthase [Planctomyces brasiliensis DSM 5305] gi|324968925|gb|ADY59703.1| hydroxymethylbilane synthase [Planctomyces brasiliensis DSM 5305] Length = 329 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 92/304 (30%), Positives = 152/304 (50%), Gaps = 17/304 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LAL A + L H P N+ ++ +ST+GD L +GG G+FT Sbjct: 8 VRIATRSSELALWQATHVAALLRAEH--PDINVELVDVSTQGDADQRAPLWSMGGTGVFT 65 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLK-GLQISAYLPREDIRDVFISHT--------AQ 116 +E+++ ++ G D AVHS KD+PT+++ L ++A RE D + A Sbjct: 66 KEVQRTVLDGMADLAVHSLKDLPTEIVDPDLTLAAVPEREQRWDALVLRNDLKGDVDPAD 125 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L L + IG+ SLRR+A L R D+ +++ RG + TRL KL+ + AI+LA AG+ Sbjct: 126 PLASLQDGARIGSGSLRRRAQLRAQRPDLKLLEIRGNLNTRLRKLDEGEYDAIILATAGL 185 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 RL + + L P+ GQGA+ +E ++ + ++L++ +N + + + ER Sbjct: 186 LRLGWNERLSCRLQPPVMFPAVGQGALGLECRTDDEQTRKLLESLNDPEARLATHAERRL 245 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L L C + + +VL+ DG H+V D++++G D A + Sbjct: 246 LNSLRAGCHAPVGVNCERAEGRFTLSSVVLSPDGA--HQVDAE----DSVDLGDDWANWQ 299 Query: 297 RFIS 300 +S Sbjct: 300 EKLS 303 >gi|126460312|ref|YP_001056590.1| porphobilinogen deaminase [Pyrobaculum calidifontis JCM 11548] gi|158513494|sp|A3MWV7|HEM3_PYRCJ RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|126250033|gb|ABO09124.1| porphobilinogen deaminase [Pyrobaculum calidifontis JCM 11548] Length = 296 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 96/302 (31%), Positives = 148/302 (49%), Gaps = 12/302 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+ TR S L+L +T+ L V + P ++ + T GD + +R L +IG KG+F Sbjct: 3 IRVATRGSKLSL---LQTQELLDQVKAVEPKVEFELVVVKTTGDVVQDRPLYQIGVKGIF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ ++ GE D AVHS KD+P++L GL I+ + R DV S SL L Sbjct: 60 EKEVNLAVLRGEADVAVHSLKDLPSELTPGLVIAGFSRRAPPYDVVASREGYSLYTLPKG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-EK 183 +V+GTSS+RR L R D+ V RG ++TR+ K+ + + A ++A AG+ RL E Sbjct: 120 AVVGTSSVRRAEFLRAVRPDVEVRPLRGNVDTRVGKILSGQYDAAIMAMAGLVRLYGWEA 179 Query: 184 VIK-EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +K + E+ PP PGQG + ++++ + ER FL + Sbjct: 180 PVKLSPIRPEEIPPPPGQGIVVAVVKEGEAWLIDILRRASDRRAAVEATAEREFLMHVGA 239 Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C A+ G A Y G + G AS G+ + + G D +GR AA+ IR I Sbjct: 240 GCHVAVGGLARYEDGGMSFVAG--YASGGRRYV-IKLWGE--DPREVGRRAAEEIRKIRE 294 Query: 302 KN 303 + Sbjct: 295 GD 296 >gi|170096450|ref|XP_001879445.1| predicted protein [Laccaria bicolor S238N-H82] gi|164645813|gb|EDR10060.1| predicted protein [Laccaria bicolor S238N-H82] Length = 340 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 91/264 (34%), Positives = 130/264 (49%), Gaps = 9/264 (3%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+K IG R S LA A RS L + P I I +TE GG Sbjct: 15 EQKAIVIGCRPSTLAKIQAELVRSRLKVL--FPASRFEISSKKFPQPEIGTSQITERGGA 72 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 L+T E+E L G+ID VHS KD+PTKL +G +I L RED RD + ++L Sbjct: 73 SLWTTELEDALFDGDIDILVHSLKDVPTKLKEGCEIIHVLEREDRRDCLVVKDGLPYRTL 132 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGI 176 ++L SV+GT S+RR A + R + + D RG I+TRL KL++ A++LA AG+ Sbjct: 133 EELPAGSVVGTGSVRRVAQMKRRYPLLVIKDVRGNIDTRLQKLDSPDLPYTALILASAGL 192 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN-HEDTWDSVNCERA 235 RL I L+ P+ GQG + E + K + +V + +D W +V ERA Sbjct: 193 LRLSLHDRITSYLSPPISYPAVGQGCLGAEFRSADTKVKAMVSRLEVWQDGW-AVRAERA 251 Query: 236 FLAELDGSCKSAIAGFAYCKGSTL 259 L L+G C + ++ G + Sbjct: 252 LLWVLEGGCAFPVGIWSSWSGDNI 275 >gi|289581680|ref|YP_003480146.1| porphobilinogen deaminase [Natrialba magadii ATCC 43099] gi|289531233|gb|ADD05584.1| porphobilinogen deaminase [Natrialba magadii ATCC 43099] Length = 378 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 84/321 (26%), Positives = 147/321 (45%), Gaps = 60/321 (18%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+ TR S LA A + +L + + + ++ + T GD+I + + +G G F Sbjct: 7 LRLATRGSTLARRQATLVKEALENRR----YEVELVTVETTGDQIRDELIHRLGKTGAFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E++++++ G++D A+HS KDMPT+ L +A R D I+ +L++L + Sbjct: 63 RELDERVLEGDLDGAIHSMKDMPTEQPDDLVTAAVPERGRPGDYLITPEGATLEELPQGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--------NNNKAHA--------- 168 +GTSSLRR+A LL R D++V RG ++TRL KL + ++ A Sbjct: 123 TVGTSSLRRRAQLLSERPDLTVEPLRGNVDTRLEKLLAPSLQAEHEERSEADKERKGNTG 182 Query: 169 -----------ILLAYAGIKRLKKEKVIKEI----------------------LNIEDFP 195 + + G+ L+K+ + +E+ ++ ++ P Sbjct: 183 EEDFEPEFDQTVDEWFDGLSELEKQALGREVETEYDAIVLAQAGLVRSGLDHYVDAQELP 242 Query: 196 -----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250 P+PGQGA+ + T + A E+ I+H + ER LAEL G C + I Sbjct: 243 TGTFVPAPGQGALAV-TATDGETATEIQSAIDHPRSRVETTVERTVLAELGGGCIAPIGI 301 Query: 251 FAYCKGSTLYFYGIVLASDGK 271 +A +G ++ V DG+ Sbjct: 302 YAIVQGEYVHATVSVFNRDGE 322 >gi|330835713|ref|YP_004410441.1| porphobilinogen deaminase [Metallosphaera cuprina Ar-4] gi|329567852|gb|AEB95957.1| porphobilinogen deaminase [Metallosphaera cuprina Ar-4] Length = 289 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 92/264 (34%), Positives = 133/264 (50%), Gaps = 14/264 (5%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 RI R S L++ ET SS ++ + I + T+ D + L EIG KG+F + Sbjct: 4 RIAARGSRLSVKQ-VETVSSYLNSRG---YETEFIEVKTRADLFSGTPLHEIG-KGVFDK 58 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 E+ + ++ G+ D AVHS KD+ + L +GL+I A RE+ DV +S L+++ S Sbjct: 59 EVNEAVLIGKADLAVHSMKDL-SALPEGLKILATPRRENPSDVLVSD--YELQEMPAGSK 115 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGT SLRR L R D+ VI+ RG ++TR+ K + I+LA AG+ RL V + Sbjct: 116 IGTGSLRRTNFLKVLRPDLQVINLRGNVDTRIRKYLTREYDGIILAEAGLVRLGI-NVKR 174 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L++ DF P QG I I V P EL+K +N E T ER + + G C S Sbjct: 175 HELDVHDFTPEANQGIIAI---VGRPHLTELLKELNDEATMTVARAEREVVKVIGGGCHS 231 Query: 247 AIAGFAYCKGSTLYFYGIVLASDG 270 + + L GI SDG Sbjct: 232 PLGVLFQMEDDRL--TGIASYSDG 253 >gi|333024831|ref|ZP_08452895.1| putative porphobilinogen deaminase [Streptomyces sp. Tu6071] gi|332744683|gb|EGJ75124.1| putative porphobilinogen deaminase [Streptomyces sp. Tu6071] Length = 308 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 26/249 (10%) Query: 47 GDRITNRTLTEIG----------------GKGLFTEEIEKKLISGEIDCAVHSAKDMPTK 90 G R R +TE G G F+ E L+ GE+D VH KD+PT Sbjct: 33 GARFVRRVITEAGDADRSTPTVAGVTRRAGASAFSSRQEAALVRGEVDVVVHCLKDLPTA 92 Query: 91 LLKG-LQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVID 149 G + + PRED+RD T L L + +GT S RR A +L R D+ V+ Sbjct: 93 PAPGTVLLRTPGPREDVRDALCGAT---LAGLPTGARVGTGSTRRVAQMLALRPDLEVVP 149 Query: 150 FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209 RG + RL + A++LA AG+ RL I E L+ E +PP+PGQGA+ I+ Sbjct: 150 VRGNVPARLAR--TRTLDAVVLAAAGLHRLGLADEITEYLDPEAYPPAPGQGALAIQVRE 207 Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY-FYGIVLAS 268 ++ +A L+ T V ER LAEL G C + + TL + V Sbjct: 208 DS-EAARLLAASGDAATDAEVRAERVLLAELHGGCSVPLGTWTSRPSPTLLRLHAAVTTP 266 Query: 269 DGKIFHEVS 277 DG H+++ Sbjct: 267 DGT--HQIA 273 >gi|121591883|ref|ZP_01679047.1| porphobilinogen deaminase [Vibrio cholerae 2740-80] gi|121546249|gb|EAX56552.1| porphobilinogen deaminase [Vibrio cholerae 2740-80] Length = 195 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 65/185 (35%), Positives = 98/185 (52%) Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 A +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 4 ASGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLEL 63 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L Sbjct: 64 ESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTLQ 123 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I +A +G T++ +V DG G R A +G A+ + Sbjct: 124 GGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQGA 183 Query: 302 KNVFN 306 K + Sbjct: 184 KEILE 188 >gi|315049563|ref|XP_003174156.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893] gi|311342123|gb|EFR01326.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893] Length = 312 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 91/277 (32%), Positives = 136/277 (49%), Gaps = 36/277 (12%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA+ A RS L + P H I L T GD+ N L G K L+ Sbjct: 12 PLRIGTRRSNLAVIQAKTIRSQLEKIA--PEHTFEIEALHTLGDKDQNSALYNFGAKDLW 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDL 121 T E+E+ L SG++D VH KDMPT+L ++A R+D RD + SL+ L Sbjct: 70 TTELEELLTSGKLDIVVHCLKDMPTQLPDSCDLAAIPLRDDPRDALVIKAGLPYTSLQTL 129 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRL 179 +++GTSS+RR A L R + ++ RG +ETRL KL++ K+ I+++ G++ Sbjct: 130 PEGAIVGTSSVRRSAQLRRLFPHLRFMNIRGNVETRLAKLDDPKSEYICIVMSACGLEL- 188 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV-KVINHEDTWDSVNC--ERAF 236 GQGAI +E + K L ++++H+ S+ C ER+ Sbjct: 189 -------------------GQGAIGLEVRKGDAKILRLTDQLLDHK---SSLACLAERSL 226 Query: 237 LAELDGSCKSAIA---GFAYCKGSTLYFYGIVLASDG 270 + L+G C I + +TL IV++ DG Sbjct: 227 MRTLEGGCSVPIGVETEWIDKPDATLRIRAIVVSIDG 263 >gi|67989478|ref|NP_001018179.1| hydroxymethylbilane synthase [Schizosaccharomyces pombe 972h-] gi|12644400|sp|Q09899|HEM3_SCHPO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|5834802|emb|CAB55280.1| hydroxymethylbilane synthase [Schizosaccharomyces pombe] Length = 336 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 92/284 (32%), Positives = 145/284 (51%), Gaps = 27/284 (9%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIG---GK 61 F IGTR S LA+ + R L K PH II T GD I ++ L E K Sbjct: 7 FPIGTRKSKLAVIQSEIIREEL---EKHYPHLEFPIISRDTIGDEILSKALFEFKRQLAK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI----SHTAQS 117 L+T E+E L++ + VHS KD+P+++ G+ I+ R D + SH ++ Sbjct: 64 SLWTRELEALLVTNQCRILVHSLKDLPSEMPDGMVIACIPKRSCPLDAIVFKAGSHY-KT 122 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAG 175 + DL SV+GTSS+RR+ALL R + +D RG + TRL KL+ +++ ++LA AG Sbjct: 123 VADLPPGSVVGTSSIRRRALLARNFPHLRFVDIRGNVGTRLAKLDAPDSQFDCLVLAAAG 182 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + RL + I ++L + GQGA+ +E ++ + E++K + H++T + ERA Sbjct: 183 LFRLGLKDRIAQMLTAPFVYYAVGQGALAVEVRADDKEMIEMLKPLQHQETLYACLAERA 242 Query: 236 FLAELDGSCK---------SAIAGFAYCKGSTLYFYGIVLASDG 270 + L G C AI+ +Y + G VL++DG Sbjct: 243 LMKRLQGGCAIPIGVQTDVLAISNSSY----RISLLGTVLSADG 282 >gi|296118431|ref|ZP_06837010.1| hydroxymethylbilane synthase [Corynebacterium ammoniagenes DSM 20306] gi|295968572|gb|EFG81818.1| hydroxymethylbilane synthase [Corynebacterium ammoniagenes DSM 20306] Length = 300 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 86/291 (29%), Positives = 136/291 (46%), Gaps = 9/291 (3%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +IGTR S LA A R + D P + I+ +T GD N E G G+FT Sbjct: 6 KIGTRGSKLATTQAGHVRDWITDNGT--PSELHIV--TTAGD--VNMAPVERIGVGVFTH 59 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALHS 125 + + L E D AVHS KD+PT + + +P RED R+ I+ +L DL + Sbjct: 60 ALREALHEQECDIAVHSFKDLPTAPDERFHL--IVPKREDNREALIARDGLTLDDLPEGA 117 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTS+ RR + L R D+ + RG IETR++ + N + A++LAYAG+ R Sbjct: 118 KVGTSAPRRISQLKAMRPDLDIRPLRGNIETRMSYVTNGELDAVMLAYAGLVRAGYADRA 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ + + P+P QGA+ +E + + + V I ERA L L+ C Sbjct: 178 TQVFSPDVLMPAPAQGALAVEVNAQDAELVNAVNAIADAKAGLQAAGERAILRRLEAGCT 237 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + +A + + + +G V DG S G ++ +G A+ + Sbjct: 238 APVAATSVIEDDLITVHGGVFQLDGSRQAVASETGPLENSYELGIKVAEAL 288 >gi|322371455|ref|ZP_08046004.1| porphobilinogen deaminase [Haladaptatus paucihalophilus DX253] gi|320548987|gb|EFW90652.1| porphobilinogen deaminase [Haladaptatus paucihalophilus DX253] Length = 366 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 91/330 (27%), Positives = 152/330 (46%), Gaps = 61/330 (18%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+ TR S LA+ + E +++L D ++ ++ + T GD++ + +TE+G G F Sbjct: 8 LRLATRGSDLAIRQSGEVKAALEDRR----FSVELVEVETTGDQLDDALITELGKTGAFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++++++ E+D A+HS KDMPT L ++A R DV ++ + + L + Sbjct: 64 RNLDQEVLDEEVDGAIHSMKDMPTDHPDELVVAAVPERASANDVLVTPDGKPIDALPDGA 123 Query: 126 VIGTSSLRRKALLLRWRSDISV------IDFR---------------------------G 152 V+GTSSLRRKA LL +R D++V +D R G Sbjct: 124 VVGTSSLRRKAQLLNFRPDLTVKPLRGNVDTRIEKLLAPVLQAEHEERTEEEKERKGHVG 183 Query: 153 K-----------IETRLNKLNNNKAHA-----------ILLAYAGIKRLK-KEKVIKEIL 189 K I+ N L+ + A I+LA AG++R V + L Sbjct: 184 KKDSYEFPYDKTIDEWFNDLSEVERRALERDIETEYDGIVLAEAGLQRSGLAHHVEYDRL 243 Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 + F P+PGQGA+ + T ++ AQ+L V++H T ER L EL+G C + I Sbjct: 244 PPKQFVPAPGQGALAVMT-LDGELAQDLHTVLDHPRTRVETTVERTILRELNGGCIAPIG 302 Query: 250 GFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 + +G ++ V + DG + R+ Sbjct: 303 VHSIIQGENVHVEAQVFSQDGSEVISIKRD 332 >gi|300709477|ref|YP_003735291.1| porphobilinogen deaminase [Halalkalicoccus jeotgali B3] gi|299123160|gb|ADJ13499.1| porphobilinogen deaminase [Halalkalicoccus jeotgali B3] Length = 379 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 91/327 (27%), Positives = 149/327 (45%), Gaps = 58/327 (17%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+ TR S LALA A + +L + + ++ + T GDRI + + +G G F Sbjct: 7 PIRLATRGSDLALAQAESVKRALSGRRR----EVELVTVETTGDRIDDELIHRLGKTGAF 62 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +++K+++G+++ A+HS KDMPT+ + L ++A R D ++ + L +L Sbjct: 63 VHSLDEKVLAGDVEGAIHSMKDMPTEESQ-LVVAAVPERATAGDRLVTPDGKPLAELPEG 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------------NNNKAH- 167 + +GT SLRR A LL R D++V RG ++TR+ KL KA+ Sbjct: 122 ATVGTGSLRRGAQLLAQRPDLTVEPLRGNVDTRVEKLLSKSLNEEYDRRVAADEQRKANT 181 Query: 168 ----------------------------------AILLAYAGIKRLKKEKVI-KEILNIE 192 AI+LA AG++R ++ I L E Sbjct: 182 DDDFEPEFDRRPEEWIEGLSERERQAFERSESFDAIVLAAAGLERSGLDREIPTSDLPTE 241 Query: 193 DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252 F P+ GQGA+ + T + A+E+ + ++H + ER LA L G C + I A Sbjct: 242 SFVPAAGQGALAV-TMADGDLAREVNEALDHPRSRVETTVERTVLATLGGGCVAPIGIHA 300 Query: 253 YCKGSTLYFYGIVLASDGKIFHEVSRN 279 +G + VLA G+ V+R+ Sbjct: 301 VIQGEHVRTRVQVLARGGEPTISVTRD 327 >gi|172039905|ref|YP_001799619.1| hypothetical protein cur_0225 [Corynebacterium urealyticum DSM 7109] gi|171851209|emb|CAQ04185.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 316 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 86/268 (32%), Positives = 136/268 (50%), Gaps = 13/268 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD--RITNRTLTEIGGKGLFT 65 +GTR S LA A R ++D +IV P GD + + + ++G G+FT Sbjct: 9 VGTRGSTLATTQAGHVRQGMIDAGYDAELHIVHTP----GDASQASQIPVAKVG-VGVFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLKDLALH 124 E + L E D AVHS KD+PT + A +P R D R+V IS + L +L Sbjct: 64 ETLRTALDERECDVAVHSFKDLPTA--PDARFRAVVPKRVDSREVLISVDNKKLMELPEG 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTS+ RR + L R D+ ++ RG I TR+ ++ ++ A++LA AG++R+ Sbjct: 122 AKVGTSAPRRVSQLRALRPDLQILPLRGNIGTRMGRVGDD-LDAVILARAGLERVGWLDK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E ++ E P+P QGA+C+E ++ +A V NH ++ V ER L+ L+ C Sbjct: 181 AAESIDPELILPAPAQGALCVEVRADDEEAWNSVADQNHTPSYACVVSERTVLSTLEAGC 240 Query: 245 KSAIAGFAYC--KGSTLYFYGIVLASDG 270 + +A A + + L G V A DG Sbjct: 241 SAPVAAHATLNEQQNQLTVTGGVFAIDG 268 >gi|318057211|ref|ZP_07975934.1| porphobilinogen deaminase [Streptomyces sp. SA3_actG] gi|318079308|ref|ZP_07986640.1| porphobilinogen deaminase [Streptomyces sp. SA3_actF] Length = 314 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 80/249 (32%), Positives = 112/249 (44%), Gaps = 26/249 (10%) Query: 47 GDRITNRTLTEIG----------------GKGLFTEEIEKKLISGEIDCAVHSAKDMPTK 90 G R R +TE G G F+ E L+ GE+D VH KD+P Sbjct: 39 GTRFVRRVITEAGDADRSTPTVAGVTRRAGASAFSSRQEAALVRGEVDVVVHCLKDLPNA 98 Query: 91 LLKG-LQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVID 149 G + + PRED+RD T L L + +GT S RR A LL R D+ V+ Sbjct: 99 PAPGTVLLRTPGPREDVRDALCGAT---LAGLPTGARVGTGSTRRVAQLLALRPDLEVVP 155 Query: 150 FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209 RG + RL + A++LA AG+ RL I E L+ E +PP+PGQGA+ I+ Sbjct: 156 VRGNVPARLAR--TRTLDAVVLAAAGLHRLGLADEITEYLDPEVYPPAPGQGALAIQVRE 213 Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY-FYGIVLAS 268 ++ +A L+ T V ER LAEL G C + + TL + V Sbjct: 214 DS-EAARLLAASGDAATDAEVRAERVLLAELHGGCSVPLGTWTSRPSPTLLRLHAAVTTP 272 Query: 269 DGKIFHEVS 277 DG H+++ Sbjct: 273 DGT--HQIA 279 >gi|302521530|ref|ZP_07273872.1| porphobilinogen deaminase [Streptomyces sp. SPB78] gi|302430425|gb|EFL02241.1| porphobilinogen deaminase [Streptomyces sp. SPB78] Length = 331 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 75/225 (33%), Positives = 107/225 (47%), Gaps = 10/225 (4%) Query: 55 LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKG-LQISAYLPREDIRDVFISH 113 +T G F+ E L+ GE+D VH KD+PT G + + PRED+RD Sbjct: 80 VTRRAGASAFSSRQEAALVRGEVDVVVHCLKDLPTAPAPGTVLLRTPGPREDVRDALCGA 139 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173 T L L + +GT S RR A LL R D+ V+ RG + RL + A++LA Sbjct: 140 T---LAGLPTGARVGTGSTRRVAQLLALRPDLEVVPVRGNVPARLAR--TRTLDAVVLAA 194 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 G+ RL I E L+ E +PP+PGQGA+ I+ ++ +A L+ T V E Sbjct: 195 VGLHRLGLADEITEYLDPEAYPPAPGQGALAIQVREDS-EAARLLAASGDAATDAEVRAE 253 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLY-FYGIVLASDGKIFHEVS 277 R LAEL G C + + TL + V DG H+++ Sbjct: 254 RVLLAELHGGCSVPLGTWTSRPSPTLLRLHAAVTTPDGT--HQIA 296 >gi|295836866|ref|ZP_06823799.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74] gi|197699525|gb|EDY46458.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74] Length = 335 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 77/218 (35%), Positives = 103/218 (47%), Gaps = 8/218 (3%) Query: 55 LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQI-SAYLPREDIRDVFISH 113 +T G F+ E L+ E+D VH KD+PT G + PRED RD Sbjct: 84 VTRRAGVSAFSSRQEAALVRREVDVVVHCLKDLPTTPAPGTALLRTPGPREDARDALCGA 143 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173 T L L + +GT S RR A LL R D+ VI RG + RL +L A++LA Sbjct: 144 T---LAGLPRGARVGTGSTRRVAQLLALRPDLEVIPVRGNVPARLARLRT--LDAVVLAA 198 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG+ RL + I E L+ E +PP+PGQGA+ I+ + A L+ T V E Sbjct: 199 AGLHRLGLTEEITEYLDPEAYPPAPGQGALAIQVREGS-GAARLLAASGDPATDTEVRAE 257 Query: 234 RAFLAELDGSCKSAIAGF-AYCKGSTLYFYGIVLASDG 270 R LAEL G C + + + TL + V A DG Sbjct: 258 RVLLAELHGGCSVPLGTWTSRPSPGTLRLHAAVTAPDG 295 >gi|307699958|ref|ZP_07637009.1| hydroxymethylbilane synthase [Mobiluncus mulieris FB024-16] gi|307614996|gb|EFN94214.1| hydroxymethylbilane synthase [Mobiluncus mulieris FB024-16] Length = 360 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 89/269 (33%), Positives = 138/269 (51%), Gaps = 30/269 (11%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR-TLTEIGGK 61 ++P IGTR S LAL +TR D+ + + I T+GD TNR +L+ +GG Sbjct: 8 QRPLVIGTRGSKLALT---QTRMVAADLEQ-RGLAVRIETFVTEGD--TNRASLSSLGGV 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F + L+ G D VHS KD+PT + GL ++A R D DV ++ L DL Sbjct: 62 GVFAAALRVALLEGRCDLVVHSLKDLPTVEVPGLVVAAIPARVDPADVLVARDGLRLADL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK------------LNNNKA--- 166 + +GT S RR L R D+S++D RG + TR+ + L+ +A Sbjct: 122 PAAARVGTGSPRRARQLAAARPDLSLVDIRGNVPTRIGRVRGLGTRAEQIGLDQGRAKED 181 Query: 167 -HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE------LVK 219 A++LA AG++RL E V + L+ E P+ GQGA+ +ET + A+E ++ Sbjct: 182 LDAVVLARAGLRRLGVEDVATDDLS-ETILPAGGQGALALETVADGLAAEEGRILAQTLR 240 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAI 248 +++ E T V+ ERA L L+ C + + Sbjct: 241 IVDDEPTRLEVSAERALLRYLEAGCAAPL 269 >gi|296109592|ref|YP_003616541.1| porphobilinogen deaminase [Methanocaldococcus infernus ME] gi|295434406|gb|ADG13577.1| porphobilinogen deaminase [Methanocaldococcus infernus ME] Length = 287 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 95/272 (34%), Positives = 136/272 (50%), Gaps = 18/272 (6%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LAL A L + I+ T+GD+I +R L IG G+FT+E Sbjct: 3 IGSRGSKLALYQANLVLKKLKSLGIDGEVKII----KTRGDQIKDRALHSIG-IGVFTKE 57 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 ++ L++ EID AVHS KD+PT L L R+ D+ I++ + +K VI Sbjct: 58 LDLSLLNHEIDIAVHSLKDIPTVWNSRLSY-VVLERDYPNDLLIANK-EDIK------VI 109 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A L D RG ++TRL KL +N+ AI+L+ AG++RL + + E Sbjct: 110 GTSSLRRRAFLKELYRDAEFKLLRGNVDTRLRKLKDNEYDAIVLSEAGVRRLNID--LSE 167 Query: 188 ILNIEDFP--PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L + P P+PGQG I + + K + +++ IN + T+ ER L EL C Sbjct: 168 FL-VYKLPILPAPGQGVIAVAYRKEDEKIKNILEKINDKKTFLETTAERKALNELGCGCH 226 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277 FA +G L V D I E S Sbjct: 227 VPFGAFAKYEGKRLMLKVAVANKDRVIKKESS 258 >gi|227876587|ref|ZP_03994697.1| porphobilinogen deaminase [Mobiluncus mulieris ATCC 35243] gi|227842788|gb|EEJ52987.1| porphobilinogen deaminase [Mobiluncus mulieris ATCC 35243] Length = 360 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 89/269 (33%), Positives = 138/269 (51%), Gaps = 30/269 (11%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR-TLTEIGGK 61 ++P IGTR S LAL +TR D+ + + I T+GD TNR +L+ +GG Sbjct: 8 QRPLVIGTRGSKLALT---QTRMVAADLEQ-RGLAVRIETFVTEGD--TNRASLSSLGGV 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F + L+ G D VHS KD+PT + GL ++A R D DV ++ L DL Sbjct: 62 GVFAAALRVALLEGRCDLVVHSLKDLPTVEVPGLVVAAIPARVDPADVLVARDGLRLADL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK------------LNNNKA--- 166 + +GT S RR L R D+S++D RG + TR+ + L+ +A Sbjct: 122 PAAARVGTGSPRRARQLAAARPDLSLVDIRGNVPTRIGRVRGLGTRAEQIGLDQGRAKED 181 Query: 167 -HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE------LVK 219 A++LA AG++RL E V + L+ E P+ GQGA+ +ET + A+E ++ Sbjct: 182 LDAVVLARAGLRRLGVEDVATDDLS-ETILPAGGQGALALETVADGLAAEEGRILAQTLR 240 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAI 248 +++ E T V+ ERA L L+ C + + Sbjct: 241 IVDDEPTRLEVSAERALLRYLEAGCAAPL 269 >gi|299132980|ref|ZP_07026175.1| porphobilinogen deaminase [Afipia sp. 1NLS2] gi|298593117|gb|EFI53317.1| porphobilinogen deaminase [Afipia sp. 1NLS2] Length = 325 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 92/308 (29%), Positives = 142/308 (46%), Gaps = 22/308 (7%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR S +A+A E L V + I+ T GD L+ GG Sbjct: 1 MASDRLRIGTRKSAMAIAQTEEIARRLKAVGT----EVEIVKFETMGDIDQAGKLSPHGG 56 Query: 61 KG-LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSL 118 KG F +I + +++G + A+HS KD+P + GL I A L R+ DV + S+ Sbjct: 57 KGGAFVAQIREAVLNGRLHAAMHSLKDVPGNEDTPGLVIGAALSRDPPGDVLVLRPGTSV 116 Query: 119 KDLALHS----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------- 163 +L IGT+S+RR A + R +I VI FRG ++R+ KL+ Sbjct: 117 DELKRTRGKGFEIGTNSVRRAAYVRRLFPEIEVIHFRGAADSRVRKLDQRAKQKLPDGGA 176 Query: 164 -NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 A A+++A +G++R+ + I +I + P+ GQG + +E + + + ++ I+ Sbjct: 177 VGPADALIMARSGLERVGLKSRIAYEFSIAEMLPAVGQGIVAVECAARDFETRYILSAID 236 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 + ER L L+G C S IAGFA G+ + VL G E SR G Sbjct: 237 DASAHACADAEREVLWVLNGHCNSPIAGFAEIMGTEMQLAASVLDHAGSRIIEASRVGCA 296 Query: 283 CDAINIGR 290 +GR Sbjct: 297 SRPRELGR 304 >gi|269977777|ref|ZP_06184737.1| porphobilinogen deaminase [Mobiluncus mulieris 28-1] gi|269934081|gb|EEZ90655.1| porphobilinogen deaminase [Mobiluncus mulieris 28-1] Length = 360 Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 89/269 (33%), Positives = 138/269 (51%), Gaps = 30/269 (11%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR-TLTEIGGK 61 ++P IGTR S LAL +TR D+ + + I T+GD TNR +L+ +GG Sbjct: 8 QRPLVIGTRGSKLALT---QTRMVAADLEQ-RGLAVRIETFVTEGD--TNRASLSSLGGV 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F + L+ G D VHS KD+PT + GL ++A R D DV ++ L DL Sbjct: 62 GVFAAALRVALLEGRCDLVVHSLKDLPTVEVPGLVVAAIPARVDPADVLVARDGLRLADL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK------------LNNNKA--- 166 + +GT S RR L R D+S++D RG + TR+ + L+ +A Sbjct: 122 PAAARVGTGSPRRARQLAAARPDLSLVDIRGNVPTRIGRVRGLGTRAEQIGLDQGRAKED 181 Query: 167 -HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE------LVK 219 A++LA AG++RL E V + L+ E P+ GQGA+ +ET + A+E ++ Sbjct: 182 LDAVVLARAGLRRLGVEDVATDDLS-ETILPAGGQGALALETVADGLAAEEGRILAQTLR 240 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAI 248 +++ E T V+ ERA L L+ C + + Sbjct: 241 IVDDEPTRLEVSAERALLRYLEAGCAAPL 269 >gi|153865130|ref|ZP_01997767.1| Porphobilinogen deaminase [Beggiatoa sp. SS] gi|152145375|gb|EDN72233.1| Porphobilinogen deaminase [Beggiatoa sp. SS] Length = 211 Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 71/197 (36%), Positives = 112/197 (56%), Gaps = 1/197 (0%) Query: 101 LPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK 160 + RE+ D F+S+T +L L +++GTSSLRR++ LL R D+ + RG + TRL+K Sbjct: 1 MRREEPFDAFVSNTYATLAALPEGAIVGTSSLRRQSQLLAHRPDLQIRSLRGNVGTRLSK 60 Query: 161 LNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220 L+N AI+LA G+KRL + I+EI++ P+ GQGAI IE ++ + ++ + Sbjct: 61 LDNGDYDAIVLAAVGLKRLGLVERIREIIDSTIMLPAIGQGAIGIECRQDDLETRQHIDN 120 Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRN 279 +N DT D V ERA L+G C+ IAG+A + S L G+V +G+ + Sbjct: 121 LNDPDTQDCVIAERALNESLEGGCQVPIAGYAEIQSSENLTMRGLVGDIEGQHILRHNLQ 180 Query: 280 GNRCDAINIGRDAAQYI 296 G R A +G+ A+ + Sbjct: 181 GARHLAAELGKSLAKVL 197 >gi|257387166|ref|YP_003176939.1| porphobilinogen deaminase [Halomicrobium mukohataei DSM 12286] gi|257169473|gb|ACV47232.1| porphobilinogen deaminase [Halomicrobium mukohataei DSM 12286] Length = 377 Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 82/321 (25%), Positives = 146/321 (45%), Gaps = 60/321 (18%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+ TR S LAL A +++ + + + + I+ + T GD+I + + +G G F Sbjct: 7 VRLATRGSDLALRQA----ATVTETLEARGYTVEIVEVETTGDQIRDELIHRLGKTGAFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++++++ GE+D AVHS KD+PT+ + L ++ RE DV ++ ++ +L + Sbjct: 63 RSLDEQVVDGEVDAAVHSMKDVPTEQPEELVVAGVPQRESPDDVLVTPDGATVDELPDGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--------NNNKAHA--------- 168 +GTSSLRRKA LL R D+ V RG ++TR+ KL + ++ A Sbjct: 123 TVGTSSLRRKAQLLAERPDLDVQPLRGNVDTRIEKLLAPTLQSEHEERSEAEKEQKEKVD 182 Query: 169 -----------ILLAYAGIKRLKKEKVIKEILNIED------------------------ 193 + + G+ ++++ + +E+ D Sbjct: 183 DEEYEFPYEQDVETWFDGLTEIERQALGREVETAYDAVVLARAGLERAGLLHHVEYQSLP 242 Query: 194 ---FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250 F P+PGQGA+ + T ++ A+EL ++H + ER L EL G C + + Sbjct: 243 TGTFVPAPGQGALAV-TATDDEFARELNDALDHPRSRAETTVERTVLDELGGGCVAPLGV 301 Query: 251 FAYCKGSTLYFYGIVLASDGK 271 A +GS + VL G+ Sbjct: 302 HAILQGSVIRTTVRVLDQAGE 322 >gi|169869297|ref|XP_001841215.1| porphobilinogen deaminase [Coprinopsis cinerea okayama7#130] gi|116497683|gb|EAU80578.1| porphobilinogen deaminase [Coprinopsis cinerea okayama7#130] Length = 351 Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 77/216 (35%), Positives = 116/216 (53%), Gaps = 7/216 (3%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 +ST GD+ ++ L +GGK L+T+E+E L E+D VHS KD+PT L +G + A L Sbjct: 52 MSTAGDKNQSQALYLMGGKALWTKELEVALKDKEVDMLVHSLKDVPTTLPEGCLLGAILE 111 Query: 103 REDIRDVFISHTA-----QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETR 157 RED D + +SL+DL SV+GTSS+RR A L R + +D RG + TR Sbjct: 112 REDPVDALVVKKGKEGVWKSLEDLPEGSVVGTSSVRRVAQLKRKFPGLRFLDVRGNLNTR 171 Query: 158 LNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215 L KL+ + A++LA AG+ RL I LN + QGA+ +E ++ ++ Sbjct: 172 LAKLDAEDGPYAALILAKAGLVRLGWGDRITADLNPPTLYHAVSQGALAVEIRDDDLESL 231 Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGF 251 E+++ + H T ERA L L+G C + + Sbjct: 232 EILQKLTHRGTDWKCRAERALLRVLEGGCSVPVGVY 267 >gi|168705543|ref|ZP_02737820.1| porphobilinogen deaminase [Gemmata obscuriglobus UQM 2246] Length = 140 Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 62/142 (43%), Positives = 88/142 (61%), Gaps = 2/142 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGPKVSLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL + Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTFASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWR 142 L L S++GTSSLRR+A LL R Sbjct: 119 LPLGSIVGTSSLRRQAQLLTRR 140 >gi|284166931|ref|YP_003405210.1| porphobilinogen deaminase [Haloterrigena turkmenica DSM 5511] gi|284016586|gb|ADB62537.1| porphobilinogen deaminase [Haloterrigena turkmenica DSM 5511] Length = 380 Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 87/329 (26%), Positives = 149/329 (45%), Gaps = 60/329 (18%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+ TR S LA A + +L D + + ++ + T GD+I + + +G G F Sbjct: 7 LRLATRGSTLARRQASLVKEALEDRR----YEVELVTVETTGDQIRDELIHRLGKTGAFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E++++++ G++D AVHS KDMPT+ + L +A R DV I+ +L++L + Sbjct: 63 RELDERVLEGDLDGAVHSMKDMPTEQPQDLVTAAVPERGPPGDVLITPDGSTLEELPDGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------NNNKAHAILLAYAG 175 +GTSSLRR+A LL R D+ V RG ++TRL KL ++A AG Sbjct: 123 TVGTSSLRRRAQLLSERPDLEVEPLRGNVDTRLEKLLAPSLQEEHQERSEADKERKGNAG 182 Query: 176 ------------------IKRLKKEKVIKEI----------------------LNIEDFP 195 + L+++ + +E+ ++ + P Sbjct: 183 DDDYEPEYDRTVDEWFDDLSELERQAMEREVETEYDAIVLAQSGLERSGLAHSVDYRELP 242 Query: 196 -----PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250 P+PGQGA+ + T + A+++ I+ + ER LAEL G C + + Sbjct: 243 TGTFVPAPGQGALAV-TARDGETARDIQSAIDFPRSRVETTVERTILAELGGGCIAPVGI 301 Query: 251 FAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 +A +G ++ V DG+ E SR+ Sbjct: 302 YAVVQGEYVHATVNVFDRDGEESVEGSRD 330 >gi|260579339|ref|ZP_05847221.1| porphobilinogen deaminase (hydroxymethylbilanesynthase) (Pre-uroporphyrinogen synthase) [Corynebacterium jeikeium ATCC 43734] gi|258602468|gb|EEW15763.1| porphobilinogen deaminase (hydroxymethylbilanesynthase) (Pre-uroporphyrinogen synthase) [Corynebacterium jeikeium ATCC 43734] Length = 359 Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 83/279 (29%), Positives = 137/279 (49%), Gaps = 22/279 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD--RITNRTLTEIGGKGL 63 F IGTR S LA R + ++V P GD + + +IG G+ Sbjct: 27 FLIGTRRSALATTQTSHVRDGMQSAGYAAELHLVHTP----GDASQAAQIPVAQIG-VGV 81 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPRE-DIRDVFISHTAQSLKDLA 122 FTE + K L +GE D AVHS KD+PT + +PR D R+V +S Q L +L Sbjct: 82 FTETLRKALEAGECDVAVHSFKDLPTA--PDPRFRTVVPRRVDPREVLVSRNNQPLLELP 139 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTS+ RR + + R D+ ++ RG I+TR+ + + A++LA AG++R+ + Sbjct: 140 QGAKVGTSAPRRVSQIRAVRPDLELMPLRGNIDTRMGRTEKD-LDAVVLARAGLERVGQL 198 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + E ++ P+P QGA+ +E ++ A + V+ ++H + + ERA L+ L+ Sbjct: 199 ERAAESIDPSTIMPAPAQGALSVEVRADDEAAWQAVRHLDHLPSHMAAVAERAVLSTLEA 258 Query: 243 SCKSAIAGFAYC-----------KGSTLYFYGIVLASDG 270 C + +A ++ K L +G V A DG Sbjct: 259 GCTAPVAAYSEWVQQEGTAEGADKRYVLRVFGGVFAMDG 297 >gi|321253441|ref|XP_003192732.1| phorphobilinogen deaminase; Hem3p [Cryptococcus gattii WM276] gi|317459201|gb|ADV20945.1| Phorphobilinogen deaminase, putative; Hem3p [Cryptococcus gattii WM276] Length = 481 Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 76/233 (32%), Positives = 116/233 (49%), Gaps = 12/233 (5%) Query: 29 DVHKIPPHNIVIIPLSTKGDRITNRTL-------TEIGGKGLFTEEIEKKLISGEIDCAV 81 DV + P+ I ++T GDR L + K L+T+E+E +LI+G D V Sbjct: 79 DVPFVHPYTFTIESMTTVGDRNQTTPLHLLSPYSSTQPAKSLWTDELEARLINGHFDMLV 138 Query: 82 HSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGTSSLRRKALL 138 HS KD+PT L G +I R D RD + + L+DL +V+GT S+RR A L Sbjct: 139 HSLKDVPTVLKDGCEIGCMAKRHDPRDALVVKQGLPYKRLEDLPDGAVVGTGSVRRVAQL 198 Query: 139 LRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 R ++ D RG + TR NKL+N ++ A++LA +G++RL L+ Sbjct: 199 KRAFPNLVFEDMRGNLNTRFNKLDNPQSPFSALILAMSGLERLGMAHRATSPLSSPTLMH 258 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 + GQGA+ IE +P+ + ++ + H T S ER L L+G C + Sbjct: 259 AVGQGALAIEIRSTDPRVRNCLRGLGHWQTEWSCGAERGCLRVLEGGCSVPVG 311 >gi|119587854|gb|EAW67450.1| hydroxymethylbilane synthase, isoform CRA_d [Homo sapiens] Length = 321 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 77/203 (37%), Positives = 109/203 (53%), Gaps = 6/203 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L + P II +ST GD+I + L++IG K LFT Sbjct: 21 IRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 79 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 138 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181 SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 139 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 198 Query: 182 EKVIKEILNIEDFPPSPGQGAIC 204 + +IL+ E+ + GQ C Sbjct: 199 HNRVGQILHPEECMYAVGQEGGC 221 >gi|50291395|ref|XP_448130.1| hypothetical protein [Candida glabrata CBS 138] gi|55976396|sp|Q6FNR4|HEM3_CANGA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|49527441|emb|CAG61081.1| unnamed protein product [Candida glabrata] Length = 329 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 97/307 (31%), Positives = 147/307 (47%), Gaps = 23/307 (7%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ IG R S LA+ + R + K P ++ + L T GD+I + L GG Sbjct: 1 MTRESINIGGRRSKLAVVQSNHVRDLVQ--AKFPQYDCTVFTLQTLGDQIQFKPLYSFGG 58 Query: 61 KGLFTEEIEKKLISGE----IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SH 113 K L+T+E+E L + +D VHS KDMPT L G ++ R D D + Sbjct: 59 KALWTKELEDYLYCEDQEKRLDLIVHSLKDMPTLLPDGFELGCVTKRVDPTDCIVMPRGS 118 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILL 171 + L DL +V+GTSS+RR A L R + RG I TRL KL++ + ++L Sbjct: 119 PHRCLADLPEGAVVGTSSVRRSAQLKRKFPHLKYQSVRGNIHTRLEKLDDPEGPFQCLVL 178 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ R+ E I + L+ + + GQGA+ IE + K +++ I D +V Sbjct: 179 ASAGLVRMGLEDRITQRLHSDIMYHAVGQGALGIEIRQGDKKILQILDEIA--DLESTVC 236 Query: 232 C--ERAFLAELDGSCKSAI---AGFAYCKGSTLYFYGIVLASDGKIF----HEVSRNGNR 282 C ER+ + L+G C I + + + K L GIV+ +G + EV N R Sbjct: 237 CLAERSLMRTLEGGCSVPIGVESSYDH-KTKKLLLKGIVVNVEGTMAIEDQQEVVVNDIR 295 Query: 283 CDAINIG 289 D+I G Sbjct: 296 EDSIKCG 302 >gi|119587853|gb|EAW67449.1| hydroxymethylbilane synthase, isoform CRA_c [Homo sapiens] Length = 304 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 77/203 (37%), Positives = 109/203 (53%), Gaps = 6/203 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L + P II +ST GD+I + L++IG K LFT Sbjct: 4 IRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 62 KELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRLKK 181 SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 122 EKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGW 181 Query: 182 EKVIKEILNIEDFPPSPGQGAIC 204 + +IL+ E+ + GQ C Sbjct: 182 HNRVGQILHPEECMYAVGQEGGC 204 >gi|58264690|ref|XP_569501.1| hydroxymethylbilane synthase [Cryptococcus neoformans var. neoformans JEC21] gi|57225733|gb|AAW42194.1| hydroxymethylbilane synthase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 481 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 76/233 (32%), Positives = 116/233 (49%), Gaps = 12/233 (5%) Query: 29 DVHKIPPHNIVIIPLSTKGDRITNRTL-------TEIGGKGLFTEEIEKKLISGEIDCAV 81 DV + P+ I ++T GDR L + K L+T+E+E +LI+G D V Sbjct: 79 DVPFVHPYTFSIESMTTVGDRNQTTPLHLLSPYSSTQPAKSLWTDELEARLINGHFDMLV 138 Query: 82 HSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGTSSLRRKALL 138 HS KD+PT L G +I R D RD + + L+DL +V+GT S+RR A L Sbjct: 139 HSLKDVPTVLKDGCEIGCMAKRHDPRDALVVKQGLPYKRLEDLPDGAVVGTGSVRRVAQL 198 Query: 139 LRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 R ++ D RG + TR NKL+N ++ A++LA +G++RL L+ Sbjct: 199 KRAFPNLVFEDMRGNLNTRFNKLDNPQSPFSALILAMSGLERLGMAHRATSPLSSPTLMH 258 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 + GQGA+ IE +P+ + ++ + H T S ER L L+G C + Sbjct: 259 AVGQGALAIEIRSTDPRVRNCLRGLGHWQTEWSCGAERGCLRVLEGGCSVPVG 311 >gi|18312026|ref|NP_558693.1| porphobilinogen deaminase [Pyrobaculum aerophilum str. IM2] gi|25453025|sp|Q8ZYW7|HEM3_PYRAE RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|18159451|gb|AAL62875.1| porphobilinogen deaminase (hemC) [Pyrobaculum aerophilum str. IM2] Length = 297 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 88/302 (29%), Positives = 145/302 (48%), Gaps = 18/302 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLF 64 ++ TR S L+L +T L + + P + I + T GD + ++ L +IG KG+F Sbjct: 3 LKVATRGSRLSL---LQTEEFLAQIKAVEPRVDFEIKIVKTTGDLVQDKPLFQIGVKGIF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ ++ GE D A+HS KD+P+++ GL ++ + R D +S L+ L Sbjct: 60 EKEVNLAVLKGEADIAIHSLKDLPSEISPGLVLAGFSKRTLPYDAVVSAVGYDLESLPKG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183 +++GTSS+RR + R D+ + RG ++TR+ K+ K A ++A AGI RL E Sbjct: 120 ALVGTSSVRRAEFIKSLRPDVRIEPLRGNVDTRVQKILQGKYDAAVMAAAGILRLYGESP 179 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V +L E PP PGQG + +L+K + ER FL + Sbjct: 180 PVKLSLLRPELLPPPPGQGIVAAVVREGEGWLIDLLKKASDPRATVEALAEREFLKNVGA 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG----KIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C A+ G A+ + + F AS K+F E D + +GR AA+ I+ Sbjct: 240 GCHVAVGGTAFSRNGYIEFIAGYAASGKRFVVKLFGE--------DPVEVGRRAAEEIKR 291 Query: 299 IS 300 ++ Sbjct: 292 VA 293 >gi|306817540|ref|ZP_07451283.1| hydroxymethylbilane synthase [Mobiluncus mulieris ATCC 35239] gi|304649582|gb|EFM46864.1| hydroxymethylbilane synthase [Mobiluncus mulieris ATCC 35239] Length = 360 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 88/269 (32%), Positives = 139/269 (51%), Gaps = 30/269 (11%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR-TLTEIGGK 61 ++P IGTR S LAL +T+ D+ + + I T+GD TNR +L+ +GG Sbjct: 8 QRPLVIGTRGSKLALT---QTQMVAADLEQ-RGLAVRIETFVTEGD--TNRASLSSLGGV 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F + L+ G D VHS KD+PT + GL ++A R D DV ++ L DL Sbjct: 62 GVFAAALRVALLEGRCDLVVHSLKDLPTVEVPGLVVAAIPARVDPADVLVARDGLRLADL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK------------LNNNKA--- 166 + +GT S RR L R D+S++D RG + TR+ + L+ ++A Sbjct: 122 PAAARVGTGSPRRARQLAAARPDLSLVDIRGNVPTRIGRVRGLGTRAEQIGLDQDRAKED 181 Query: 167 -HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE------LVK 219 A++LA AG++RL E V + L+ E P+ GQGA+ +ET + A+E ++ Sbjct: 182 LDAVVLARAGLRRLGVEDVATDDLS-ETILPAGGQGALALETVADGLAAEEGRILAQTLR 240 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAI 248 +++ E T V+ ERA L L+ C + + Sbjct: 241 IVDDEPTRLEVSAERALLRYLEAGCAAPL 269 >gi|134109785|ref|XP_776442.1| hypothetical protein CNBC4970 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259118|gb|EAL21795.1| hypothetical protein CNBC4970 [Cryptococcus neoformans var. neoformans B-3501A] Length = 481 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 76/233 (32%), Positives = 116/233 (49%), Gaps = 12/233 (5%) Query: 29 DVHKIPPHNIVIIPLSTKGDRITNRTL-------TEIGGKGLFTEEIEKKLISGEIDCAV 81 DV + P+ I ++T GDR L + K L+T+E+E +LI+G D V Sbjct: 79 DVPFVHPYTFSIESMTTVGDRNQTTPLHLLSPYSSTQPAKSLWTDELEARLINGHFDMLV 138 Query: 82 HSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGTSSLRRKALL 138 HS KD+PT L G +I R D RD + + L+DL +V+GT S+RR A L Sbjct: 139 HSLKDVPTVLKDGCEIGCMAKRHDPRDALVVKQGLPYKRLEDLPDGAVVGTGSVRRVAQL 198 Query: 139 LRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 R ++ D RG + TR NKL+N ++ A++LA +G++RL L+ Sbjct: 199 KRAFPNLVFEDMRGNLNTRFNKLDNPQSPFSALILAMSGLERLGMAHRATSPLSSPTLMH 258 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 + GQGA+ IE +P+ + ++ + H T S ER L L+G C + Sbjct: 259 AVGQGALAIEIRSTDPRVRNCLRGLGHWQTEWSCGAERGCLRVLEGGCSVPVG 311 >gi|313124929|ref|YP_004035193.1| hydroxymethylbilane synthase [Halogeometricum borinquense DSM 11551] gi|312291294|gb|ADQ65754.1| hydroxymethylbilane synthase [Halogeometricum borinquense DSM 11551] Length = 375 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 91/339 (26%), Positives = 152/339 (44%), Gaps = 64/339 (18%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M++ R+ TR S LAL R +L D ++ ++ + T+GD+I + L +G Sbjct: 1 MKRGTLRLATRGSDLALRQTASVRDTLADRR----FDVELVEVETRGDQIRDELLHRLGK 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G F ++++++ E+D AVHS KDMPT+ + L ++ R DV ++ + ++ Sbjct: 57 TGAFVRALDERVLDEEVDAAVHSMKDMPTEHPRDLVVAGVPERAPANDVLLTPDGTAFEN 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------------NNN 164 L SV+GTSSLRRKA +L R D+ V RG ++TR+ KL ++ Sbjct: 117 LPAGSVVGTSSLRRKAQILSARPDLEVEPLRGNVDTRVEKLLAPTLQREHEARVDDDSDK 176 Query: 165 KAHAILLAYAG--------------------IKRLKKEK---------VIKEI------- 188 KA++ + +G I+R E+ V+ E Sbjct: 177 KANSAEASASGEEYETDFDRTIEEWFDDLSEIERRSLERDVETEYDAIVLAEAGLKRSGL 236 Query: 189 ---LNIEDFPPS-----PGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + PP+ PGQGAI + ++ + ++ T + ER LAEL Sbjct: 237 LHRVEYDRLPPTEFVPAPGQGAIAVTARRDHENLDRIQDALDDPRTRVTTTVERTVLAEL 296 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 G C + I A +G ++ VL++DG+ SRN Sbjct: 297 GGGCIAPIGVHAKLQGEHVHVTARVLSTDGEEEVSASRN 335 >gi|164661463|ref|XP_001731854.1| hypothetical protein MGL_1122 [Malassezia globosa CBS 7966] gi|159105755|gb|EDP44640.1| hypothetical protein MGL_1122 [Malassezia globosa CBS 7966] Length = 530 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 80/233 (34%), Positives = 128/233 (54%), Gaps = 20/233 (8%) Query: 29 DVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG--LFTEEIEKKLISGEIDCAVHSAKD 86 D + P + + ++T GD+ L IGG+G ++T+E+E L++G +D VHS KD Sbjct: 147 DQKDVRPVDFPVRTMATLGDQNLKSPLYVIGGEGRAIWTKELEVALMAGGVDAIVHSLKD 206 Query: 87 MPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLALHSVIGTSSLRRKALLLRWRS 143 +PT + G++++A L RED RD + + +SL+++ SVIGTSS+RR +LL R Sbjct: 207 VPTTMPDGVELAAILEREDPRDALVVKENLPYKSLQEMPQGSVIGTSSVRRVSLLRRAYP 266 Query: 144 DISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQG 201 + D RG I TRL KL+ + A++LA AG+KR+ E I ++ + GQG Sbjct: 267 HLMFSDVRGNINTRLAKLDAADGPYTALVLAAAGLKRMDLEHRITAYVSEPVMLHAVGQG 326 Query: 202 AICIETHVNNPKAQ---------ELVKVI-NHEDTWDSVNCERAFLAELDGSC 244 ++ IE V P+ + +++ I N TW V ERA + ++G C Sbjct: 327 SLAIE--VRTPRGESAERDERIRRMIRSISNWRATWRCV-AERALMHRMEGGC 376 >gi|332796306|ref|YP_004457806.1| porphobilinogen deaminase [Acidianus hospitalis W1] gi|332694041|gb|AEE93508.1| porphobilinogen deaminase [Acidianus hospitalis W1] Length = 292 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 84/247 (34%), Positives = 127/247 (51%), Gaps = 8/247 (3%) Query: 41 IPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAY 100 I + TK D N L ++G KG+F +E+ + +I G D AVHS KD+ + L + L I A Sbjct: 33 IGVKTKADLFVNEPLYKLG-KGVFEKEVNEYVIRGLADLAVHSMKDLTSNLSEELDILAT 91 Query: 101 LPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK 160 + R+ DV +S + + DL SVIGTSS+RRK + R DI V D RG I+TR+ K Sbjct: 92 VKRDSPYDVLVSK--KDVFDLDSGSVIGTSSIRRKNFMTFLRPDILVKDLRGNIDTRIKK 149 Query: 161 LNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220 + + I++A A I RL + LN DF P QG I + N+ + ++L+ Sbjct: 150 YTSGEYVGIIIAEASILRLNL-NINYFKLNPIDFTPEANQGIIAVVGKKNDERTRKLLSE 208 Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG--KIFHEVSR 278 ++ ++T++ ER+ + + G C S Y + GI S+G KI + R Sbjct: 209 LHDQETFNEAIAERSTMEIVGGGCHSPFG--VYFEQIDDRLLGIASFSNGKKKITVTIER 266 Query: 279 NGNRCDA 285 GN D Sbjct: 267 KGNPKDV 273 >gi|315047640|ref|XP_003173195.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893] gi|311343581|gb|EFR02784.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893] Length = 342 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 86/260 (33%), Positives = 131/260 (50%), Gaps = 18/260 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA+ A + L + P H I L T GD+ N L G K L+ Sbjct: 10 PLRIGTRRSNLAIVQAKGVQDQLQKI--APDHTFEIEALHTLGDKDQNSALYNFGAKNLW 67 Query: 65 TEEIEKKLISGEIDCAVHSAK-------DMPTKLLKGLQISAYLPREDIRDVFISHTA-- 115 T E+E+ L SG++D VH K DMPT L ++A R+D RD I Sbjct: 68 TTELEELLTSGKLDVIVHCLKGECSKNSDMPTNLPDSCDLAAIPLRDDPRDALIVKAGLP 127 Query: 116 -QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLA 172 SL+ L ++IGTSS+RR A L R + + RG +ETRL KL++ ++ I+++ Sbjct: 128 YTSLQTLPEGAIIGTSSVRRSAQLHRLFPSLRFTNIRGNVETRLAKLDDPQSEYTCIVMS 187 Query: 173 YAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELV-KVINHEDTWDS 229 G++R+ I + L +D + GQGA+ +E + K L+ ++++H+ + Sbjct: 188 ACGLERIGLGYRISQRLGSKDGGILHAIGQGALGLEVRKGDTKILHLLDQLVDHKSSLAC 247 Query: 230 VNCERAFLAELDGSCKSAIA 249 + ERA + L+G C I Sbjct: 248 L-AERALMRTLEGGCSVPIG 266 >gi|88603799|ref|YP_503977.1| porphobilinogen deaminase [Methanospirillum hungatei JF-1] gi|88189261|gb|ABD42258.1| hydroxymethylbilane synthase [Methanospirillum hungatei JF-1] Length = 295 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 83/251 (33%), Positives = 126/251 (50%), Gaps = 13/251 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA A A + + L D+ + ++ +ST GD T L EIGG+G+F Sbjct: 2 PLRVGTRASELAKAQAVKVCTMLEDLGV----DTELVFISTAGDEQTGVPLHEIGGQGVF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 ++ L+ +ID AVHS KD+P + GL SA L R+ D + T L ++ Sbjct: 58 VRALDDALVQNKIDLAVHSMKDIPAERPYGLVTSAILARDSPCDYIV--TDHELDEI--- 112 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSS RR A R + RG + TRL+KL + + AI+LA AG++RL + Sbjct: 113 TTLGTSSTRRTAQCRRNLPWADIRPLRGNVNTRLSKLQSGEYDAIMLAKAGLERLSM-TL 171 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 L+ PSP QG I + + +P +++ I+ T ER + + G C Sbjct: 172 DGYQLDPRVHVPSPNQGTIAVVSR-TDPDVTDIISKIDDPKTRMDTLLERRVMEMIGGGC 230 Query: 245 KSAIAGFAYCK 255 + + YCK Sbjct: 231 FTPLG--IYCK 239 >gi|68536995|ref|YP_251700.1| hypothetical protein jk1901 [Corynebacterium jeikeium K411] gi|68264594|emb|CAI38082.1| hemC [Corynebacterium jeikeium K411] Length = 367 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 76/252 (30%), Positives = 130/252 (51%), Gaps = 11/252 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD--RITNRTLTEIGGK 61 + F IGTR S LA R + ++V P GD + + +IG Sbjct: 25 RTFLIGTRRSALATTQTSHVRDGMQSAGYAAELHLVHTP----GDASQAAQIPVAQIG-V 79 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPRE-DIRDVFISHTAQSLKD 120 G+FTE + K L +GE D AVHS KD+PT + +PR D R+V +S Q L + Sbjct: 80 GVFTETLRKALEAGECDVAVHSFKDLPTA--PDPRFRTVVPRRVDPREVLVSRNNQPLLE 137 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTS+ RR + + R D+ ++ RG I+TR+ + + A++LA AG++R+ Sbjct: 138 LPQGAKVGTSAPRRVSQIRAVRPDLELMPLRGNIDTRMGRTEKD-LDAVVLARAGLERVG 196 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + E ++ P+P QGA+ +E ++ A + V+ ++H + + ERA L+ L Sbjct: 197 QLERAAESIDPSTIMPAPAQGALSVEVRADDEAAWQAVRHLDHLPSHMAAVAERAVLSTL 256 Query: 241 DGSCKSAIAGFA 252 + C + +A ++ Sbjct: 257 EAGCTAPVAAYS 268 >gi|45358435|ref|NP_987992.1| porphobilinogen deaminase [Methanococcus maripaludis S2] gi|44921193|emb|CAF30428.1| Porphobilinogen deaminase [Methanococcus maripaludis S2] Length = 304 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 80/254 (31%), Positives = 128/254 (50%), Gaps = 20/254 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+ E + L++ I II + T GD+ N+ L ++G G+FT Sbjct: 3 LRIGTRGSTLAMVQT-EYIAGLLNDLDIETE---IIIVKTTGDKDQNKKLADLG-IGVFT 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ K++ EID AVHS KD+PT LQI+A RE D+ I Sbjct: 58 KELDNKMLENEIDIAVHSLKDVPTLWSDELQITATPKRESPDDIIIWRKDCDFDIEHDEL 117 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS+RR + L +++ RG + TR+NKL N + I++A AG+ I Sbjct: 118 NVGTSSIRRTSFLQFTNPNLTPKLLRGNVATRINKLRNGEYDTIVMAKAGL--------I 169 Query: 186 KEILNIEDFP-------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 ++ +++ +F P+P QG I + + + K ++++ I + T+ ER L Sbjct: 170 RQGIDLSEFNYKKLDILPAPAQGVIGVASRKADAKINQILEKICDKKTYIEATAERWALK 229 Query: 239 ELDGSCKSAIAGFA 252 E G C++ FA Sbjct: 230 EYGGGCQAPFGAFA 243 >gi|256026474|ref|ZP_05440308.1| porphobilinogen deaminase [Fusobacterium sp. D11] gi|289764485|ref|ZP_06523863.1| porphobilinogen deaminase [Fusobacterium sp. D11] gi|289716040|gb|EFD80052.1| porphobilinogen deaminase [Fusobacterium sp. D11] Length = 220 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 71/188 (37%), Positives = 95/188 (50%), Gaps = 1/188 (0%) Query: 85 KDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSD 144 KDMP KGL A RED RDV +S L L + IGTSSLRR L R D Sbjct: 2 KDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVTLPQGAKIGTSSLRRAMNLKAVRPD 60 Query: 145 ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAIC 204 + RG I TRL KL AI+LA AG+KR I E L+ E FPP+P QG + Sbjct: 61 FEIKHLRGNIHTRLKKLETEDYDAIILAAAGLKRTGMTDKITEYLSGEVFPPAPAQGVLY 120 Query: 205 IETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGI 264 I+ N+ + +E++K I++E+ V ER F DG C + + ++ G + F + Sbjct: 121 IQCRENDKEIKEILKSIHNENVAKIVEIEREFSKIFDGGCHTPMGCYSQVNGDKIKFTAV 180 Query: 265 VLASDGKI 272 L +I Sbjct: 181 YLDEGKQI 188 >gi|167535436|ref|XP_001749392.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772258|gb|EDQ85913.1| predicted protein [Monosiga brevicollis MX1] Length = 643 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 111/211 (52%), Gaps = 8/211 (3%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E RIGTR S LA+ L H P ++PLST GD L + Sbjct: 413 ESPHIRIGTRSSVLAMWQTRWVVERLTRAH--PGVRFSVVPLSTVGDANLTLDLNKFSTT 470 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKD 120 G+FT+ + + L++ E+D VHS KD+P+ + G Q++A PRED RDV + H S +KD Sbjct: 471 GIFTDALVRALLAQEVDILVHSLKDLPSTISPGTQLAAIGPREDPRDVVVFHHRHSEIKD 530 Query: 121 LA---LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAG 175 LA +V+GTSS RR+A L + RG + TRL KL++ N A+ LA AG Sbjct: 531 LAQLPAGAVVGTSSTRRRAQLAAAYPQLRFAPVRGNVMTRLRKLDDPANGYDALCLAAAG 590 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206 + RL E I + L + + GQGA+ I+ Sbjct: 591 LIRLGLEARIGQFLPLTVSRHAIGQGALGIQ 621 >gi|4884830|gb|AAD31824.1|AF131199_3 porphobilinogen deaminase [Pseudomonas syringae pv. syringae FF5] Length = 144 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 61/145 (42%), Positives = 87/145 (60%), Gaps = 2/145 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDI 145 L S++GTSSLRR+A LL R D+ Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDL 143 >gi|299134347|ref|ZP_07027540.1| porphobilinogen deaminase [Afipia sp. 1NLS2] gi|298591094|gb|EFI51296.1| porphobilinogen deaminase [Afipia sp. 1NLS2] Length = 324 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 90/306 (29%), Positives = 139/306 (45%), Gaps = 20/306 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-LF 64 RIGTR S +ALA E L P + I+ T GD+ L ++GGKG F Sbjct: 1 MRIGTRKSVMALAQTNEIARQLTAAD--PSLAVEIVKFETMGDQDQTGKLLDLGGKGGAF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +I + G ++ A+HS KDMP + GL I A L R+ D + +L +L Sbjct: 59 VAQIRDAVREGRLEAAMHSLKDMPGNEDTPGLVIGAMLLRDPPTDALVVRNGVTLDELRR 118 Query: 124 HS----VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK------------AH 167 IGT+++RR A + R + +I FRG +TR+ KL+ + A Sbjct: 119 SRGKGFKIGTNAVRRAAYVRRLFPEAEIIHFRGAADTRIRKLDGREMQRLPDGGEVGPAD 178 Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227 A+++A AG++R+ I + ++ P+ GQG + +E + + + I++ + Sbjct: 179 ALVMARAGLERVGFADRIVHQFSPDEMLPAVGQGIVAVECAAADWQTLARLAGIDNAVSR 238 Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 ER L L+G C S IAG+A G + VL F EV+R G Sbjct: 239 QCGEAEREVLWVLNGHCNSPIAGYATLDGGEISLKAAVLDEANHHFIEVTRRGPVGRPRE 298 Query: 288 IGRDAA 293 +GR A Sbjct: 299 LGRAVA 304 >gi|67515679|ref|XP_657725.1| hypothetical protein AN0121.2 [Aspergillus nidulans FGSC A4] gi|40746143|gb|EAA65299.1| hypothetical protein AN0121.2 [Aspergillus nidulans FGSC A4] Length = 350 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 93/294 (31%), Positives = 144/294 (48%), Gaps = 17/294 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K F IGTR S LAL ++L + + P + I T GD+ T L + K Sbjct: 15 QKIFTIGTRKSKLALLQTDLVLAALKE--RFPDYTFKIHSRETAGDQNTTIALRDFTTKN 72 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDM---PTKLLKGLQISAYLPREDIRDVFISHTA---Q 116 L+T+E+E L +G +D VHS K + PT L + + RED RD + Sbjct: 73 LWTQELEDLLEAGSVDLIVHSLKGISYVPTLLPTSCTLGPMMKREDSRDGLVIKKGLPNM 132 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYA 174 SL ++ SV+GTSS+RR A L R + V+D RG I TRL KL+ ++ ++LA A Sbjct: 133 SLAEMPAGSVVGTSSIRRTAQLARKYPHLKVMDVRGNIGTRLAKLDAEDSPYTCLILAAA 192 Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 G+ RL I + L+ + + GQGA+ IE + ++++ I H++T + Sbjct: 193 GLLRLGLGDRIYQYLDSRNAGMLYAVGQGALGIEIRKGDKAMEDILNTIGHKETTFACLA 252 Query: 233 ERAFLAELDGSCKSAIA----GFAYCKGST-LYFYGIVLASDGKIFHEVSRNGN 281 ER+ L L+G C + + GS+ L +V++ DG EV +G Sbjct: 253 ERSLLRTLEGGCSAPLGVETEWIQDTNGSSKLRMRSVVVSVDGSEHAEVEIDGT 306 >gi|297180547|gb|ADI16759.1| porphobilinogen deaminase [uncultured gamma proteobacterium HF0010_11B23] Length = 292 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 89/283 (31%), Positives = 136/283 (48%), Gaps = 18/283 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LAL D++K N I T+GDR + + + K F Sbjct: 1 MRIATRSSKLALKQV----DIFKDLYKTQEINFEIKTQITEGDRKSKKG-ENLFDKAHFV 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E++E L++ + D A+HS KDM +GL+I A + + DV + +L DLA + Sbjct: 56 EDLESSLLNYDADIAIHSLKDMSCHDTEGLEIYAAIEHQSRSDVMVYKDQINLNDLA-NI 114 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSSLRR + + + + RG I+TRL KL+ +K AI+LA AGI+RL Sbjct: 115 KIGTSSLRRTRQCKHFLKNNNCSEIRGNIDTRLLKLHEDKFDAIILAKAGIERLG----- 169 Query: 186 KEILNIE----DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 LN+ DF P+ GQG I ++ ++ K + L+ I + + + ER + L+ Sbjct: 170 ---LNVNFIDLDFLPAIGQGIIAVQCRSDDKKTKTLLDQIKNFELLQMIEIERRIVRNLN 226 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284 +C SA++ + G + + I E S N N D Sbjct: 227 ATCNSALSIRSKIDGDVFQTCLEIYGDNEIISEEFSSNLNSID 269 >gi|323305779|gb|EGA59518.1| Hem3p [Saccharomyces cerevisiae FostersB] Length = 275 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 83/258 (32%), Positives = 126/258 (48%), Gaps = 11/258 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + IG R S LA+ + + + K P ++ + L T GD+I + L GG Sbjct: 1 MGPETLHIGGRKSKLAVIQSNHVLKLIEE--KYPDYDCKVFTLQTLGDQIQFKPLYSFGG 58 Query: 61 KGLFTEEIEKKLI----SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---H 113 K L+T+E+E L S ++D VHS KDMPT L +G ++ R D D + Sbjct: 59 KALWTKELEDHLYHDDPSKKLDLIVHSLKDMPTLLPEGFELGGITKRVDPTDCLVMPFYS 118 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILL 171 +SL DL ++GTSS+RR A L R + RG I+TRL KL++ K+ I+L Sbjct: 119 AYKSLDDLPDGGIVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIIL 178 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ R+ E I + + + + GQGA+ IE + K +++ I + Sbjct: 179 ASAGLMRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCL 238 Query: 232 CERAFLAELDGSCKSAIA 249 ERA + L+G C I Sbjct: 239 SERALMRTLEGGCSVPIG 256 >gi|167835847|ref|ZP_02462730.1| porphobilinogen deaminase [Burkholderia thailandensis MSMB43] Length = 159 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 61/145 (42%), Positives = 91/145 (62%), Gaps = 2/145 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L +V+ Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVV 133 Query: 128 GTSSLRRKALLLRWRSDISVIDFRG 152 GTSSLRR+A+L + V RG Sbjct: 134 GTSSLRREAMLRARHPRLDVRPLRG 158 >gi|58699795|ref|ZP_00374427.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila ananassae] gi|58533687|gb|EAL58054.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila ananassae] Length = 199 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 105/187 (56%), Gaps = 6/187 (3%) Query: 108 DVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH 167 D FISH SL+ L + I TS++RRK LL +R D++++ RG + TRL N Sbjct: 10 DAFISHKHNSLESLPQQATIATSAIRRKVQLLNFRPDLNIVPLRGNVTTRLQ---NQSFD 66 Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227 I+LA AG+ RL+K +I E+L + + GQGAICI+ N+ K +L++ IN+ ++ Sbjct: 67 GIILAEAGLIRLEKHHLITEVLPPKVMLSAVGQGAICIQCRRNDVKIIDLLEKINNNMSF 126 Query: 228 DSVNCERAFLAELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286 V ER+F+ ++GSC + +A A Y + LY ++ +DGK + R DA Sbjct: 127 IGVKSERSFMKTVNGSCFTPLAALAEYVSENMLYLRCML--ADGKNIYFTERTSFIEDAE 184 Query: 287 NIGRDAA 293 +G DA Sbjct: 185 KMGMDAG 191 >gi|227496731|ref|ZP_03927005.1| porphobilinogen deaminase [Actinomyces urogenitalis DSM 15434] gi|226833762|gb|EEH66145.1| porphobilinogen deaminase [Actinomyces urogenitalis DSM 15434] Length = 402 Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 84/301 (27%), Positives = 137/301 (45%), Gaps = 61/301 (20%) Query: 6 FRIGTRCSPLAL------AHAFETRSSL--MDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57 R+GTR S LAL A E ++L ++H + ++P+ T+GD + L++ Sbjct: 4 VRLGTRGSALALTQSGLVARMLEQAAALAGQELH------VELVPVRTRGD-VDPTALSQ 56 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ- 116 +GG G+F + + L++GE D AVHS KD+PT + GL+I+A RED RDV + A Sbjct: 57 LGGVGVFATALREALLAGECDLAVHSYKDLPTAAVPGLRIAAVPAREDPRDVLCTRAATL 116 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--------- 167 L DL + +GT S RR A LL R D++++ RG + TRL ++ + Sbjct: 117 GLHDLPAGARVGTGSPRRSAQLLAQRPDLTIVPIRGNVPTRLARVVGSVVSADGPMGATA 176 Query: 168 -----AILLAYAGIKRLKKEKVIKEIL----------NIEDFP----------------- 195 A +LA +G++RL E + L ++ P Sbjct: 177 EPDLDAAILALSGMRRLGLEDYASQPLAARCGARSQVEVQGIPDGGSAAGSPATTEPWML 236 Query: 196 PSPGQGAICIETH----VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGF 251 P+ QGA+ +ET P + +++ T + ER+ + L C + + Sbjct: 237 PAAAQGALAVETRDRVSCELPVLTVALALVDDPVTRACADAERSLMRCLAAGCAAPVGAL 296 Query: 252 A 252 A Sbjct: 297 A 297 >gi|134045720|ref|YP_001097206.1| porphobilinogen deaminase [Methanococcus maripaludis C5] gi|132663345|gb|ABO34991.1| hydroxymethylbilane synthase [Methanococcus maripaludis C5] Length = 304 Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 80/254 (31%), Positives = 127/254 (50%), Gaps = 20/254 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+ E + L++ + II + T GD+ N+ L ++G G+FT Sbjct: 3 LRIGTRGSTLAMIQT-EYIAGLLNDLGVETE---IIIVKTTGDKDQNKKLADLG-LGVFT 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ K++ EID AVHS KD+PT + LQI+A RE D+ I Sbjct: 58 KELDNKMLENEIDIAVHSLKDVPTLWSEELQITATPKRESPDDIIIWRKDSDFDIEHDEL 117 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS+RR + L +++ RG + TR+NKL + I++A AG+ I Sbjct: 118 NIGTSSIRRTSFLQFTHPNLTPKLLRGNVATRINKLRTGEYDTIIMAKAGL--------I 169 Query: 186 KEILNIEDFP-------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 ++ +++ +F P+P QG I + + + K E++ I + T+ ER L Sbjct: 170 RQGIDLSEFNYKKPEILPAPAQGVIGVASRKADTKINEILDKICDKKTYIEAAAERWALK 229 Query: 239 ELDGSCKSAIAGFA 252 E G C++ FA Sbjct: 230 EYGGGCQAPFGAFA 243 >gi|151941802|gb|EDN60158.1| phorphobilinogen deaminase [Saccharomyces cerevisiae YJM789] Length = 327 Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 83/258 (32%), Positives = 126/258 (48%), Gaps = 11/258 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + IG R S LA+ + + + K P ++ + L T GD+I + L GG Sbjct: 1 MGPETLHIGGRKSKLAVIQSNHVLKLIEE--KYPDYDCKVFTLQTLGDQIQFKPLYSFGG 58 Query: 61 KGLFTEEIEKKLI----SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---H 113 K L+T+E+E L S ++D VHS KDMPT L +G ++ R D D + Sbjct: 59 KALWTKELEDHLYHDDPSKKLDLIVHSLKDMPTLLPEGFELGGITKRVDPTDCLVMPFYS 118 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILL 171 +SL DL ++GTSS+RR A L R + RG I+TRL KL++ K+ I+L Sbjct: 119 AYKSLDDLPDGGIVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIIL 178 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ R+ E I + + + + GQGA+ IE + K +++ I + Sbjct: 179 ASAGLMRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCL 238 Query: 232 CERAFLAELDGSCKSAIA 249 ERA + L+G C I Sbjct: 239 SERALMRTLEGGCSVPIG 256 >gi|6319996|ref|NP_010076.1| Hem3p [Saccharomyces cerevisiae S288c] gi|122846|sp|P28789|HEM3_YEAST RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|3771|emb|CAA77804.1| porphobilinogen deaminase [Saccharomyces cerevisiae] gi|1429351|emb|CAA67486.1| hydroxymethylbilane synthase [Saccharomyces cerevisiae] gi|1431340|emb|CAA98783.1| HEM3 [Saccharomyces cerevisiae] gi|190405197|gb|EDV08464.1| phorphobilinogen deaminase [Saccharomyces cerevisiae RM11-1a] gi|256270069|gb|EEU05314.1| Hem3p [Saccharomyces cerevisiae JAY291] gi|259145042|emb|CAY78306.1| Hem3p [Saccharomyces cerevisiae EC1118] gi|285810835|tpg|DAA11659.1| TPA: Hem3p [Saccharomyces cerevisiae S288c] gi|323309897|gb|EGA63098.1| Hem3p [Saccharomyces cerevisiae FostersO] gi|323349387|gb|EGA83611.1| Hem3p [Saccharomyces cerevisiae Lalvin QA23] Length = 327 Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 83/258 (32%), Positives = 126/258 (48%), Gaps = 11/258 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + IG R S LA+ + + + K P ++ + L T GD+I + L GG Sbjct: 1 MGPETLHIGGRKSKLAVIQSNHVLKLIEE--KYPDYDCKVFTLQTLGDQIQFKPLYSFGG 58 Query: 61 KGLFTEEIEKKLI----SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---H 113 K L+T+E+E L S ++D VHS KDMPT L +G ++ R D D + Sbjct: 59 KALWTKELEDHLYHDDPSKKLDLIVHSLKDMPTLLPEGFELGGITKRVDPTDCLVMPFYS 118 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILL 171 +SL DL ++GTSS+RR A L R + RG I+TRL KL++ K+ I+L Sbjct: 119 AYKSLDDLPDGGIVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIIL 178 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ R+ E I + + + + GQGA+ IE + K +++ I + Sbjct: 179 ASAGLMRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCL 238 Query: 232 CERAFLAELDGSCKSAIA 249 ERA + L+G C I Sbjct: 239 SERALMRTLEGGCSVPIG 256 >gi|325001831|ref|ZP_08122943.1| porphobilinogen deaminase [Pseudonocardia sp. P1] Length = 322 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/201 (33%), Positives = 115/201 (57%), Gaps = 7/201 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LA+A + +++ D H ++ +ST GDR + +T++G G+F Sbjct: 4 LKIGTRPSKLAVAQS----TTIADRLTAAGHPSELVTVSTSGDR-SMAPVTQLG-VGVFV 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + L +G+ID AVHS KD+PT + L+I+A RED RD ++ + L +L + Sbjct: 58 SALRDALDAGDIDVAVHSFKDLPTAQPEHLRIAAVPGREDPRDALVTG-GRVLGELGRGA 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT S RR A L + V+ RG ++TR+ K+ + + A+++A AG++RL + + Sbjct: 117 RVGTGSPRRAAQLYALGQGLEVVPIRGNVDTRIGKVRSGELDAVVVAAAGLRRLGRIEEA 176 Query: 186 KEILNIEDFPPSPGQGAICIE 206 E+++ P+P QGA+ IE Sbjct: 177 DELIDPLQMLPAPAQGALAIE 197 >gi|1749684|dbj|BAA13899.1| unnamed protein product [Schizosaccharomyces pombe] Length = 335 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 89/284 (31%), Positives = 144/284 (50%), Gaps = 28/284 (9%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIG---GK 61 F IGTR S LA+ H ++ ++ K PH II T GD I ++ E K Sbjct: 7 FPIGTRKSKLAVIH----QNYREELEKHNPHLEFPIISRDTIGDEILSKAWLEFKRQLAK 62 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI----SHTAQS 117 L+T E+E L++ + VHS KD+P++ + I+ R D + SH ++ Sbjct: 63 SLWTRELEALLVTNQCRILVHSLKDLPSENARWYGIACIPKRSCPLDAIVFKAGSHY-KT 121 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAG 175 + DL SV+GTSS+RR+ALL R + +D RG + TRL KL+ +++ ++LA AG Sbjct: 122 VADLPPGSVVGTSSIRRRALLARNFPHLRFVDIRGNVGTRLAKLDAPDSQFDCLVLAAAG 181 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + RL + I ++L + GQGA+ +E ++ + E++K + H++T + ERA Sbjct: 182 LFRLGLKDRIAQMLTAPFVYYAVGQGALAVEVRADDKEMIEMLKPLQHQETLYACLAERA 241 Query: 236 FLAELDGSCK---------SAIAGFAYCKGSTLYFYGIVLASDG 270 + L G C AI+ +Y + G VL++DG Sbjct: 242 LMKRLQGGCAIPIGVQTDVLAISNSSY----RISLLGTVLSADG 281 >gi|3172397|gb|AAC18581.1| porphobilinogen deaminase [Brevibacillus brevis] Length = 151 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/150 (42%), Positives = 89/150 (59%), Gaps = 2/150 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +++GTR S LAL L P + + + TKGDRI + TL+++GGKGLF Sbjct: 4 WKVGTRRSKLALTQTNWVVDKLKGFA--PEADFELHEIVTKGDRILDVTLSKVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L E D AVHS KDMP +L +GL I A R D RDV +S ++L +L + Sbjct: 62 KEIEQSLFDKETDFAVHSLKDMPAELPEGLVIGAIPKRVDPRDVLLSKDGKTLDELPQGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIE 155 ++GTS+LRR A +L R DI + RG I+ Sbjct: 122 LVGTSTLRRSAQILAHRPDIQIESLRGNID 151 >gi|304393221|ref|ZP_07375149.1| porphobilinogen deaminase [Ahrensia sp. R2A130] gi|303294228|gb|EFL88600.1| porphobilinogen deaminase [Ahrensia sp. R2A130] Length = 324 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 84/283 (29%), Positives = 130/283 (45%), Gaps = 20/283 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-LF 64 F I TR S +ALA A L + +P ++ + + +GDR L GGKG F Sbjct: 4 FLIATRKSKMALAQANHVADLLREA--VPGLDVDLAENNPRGDRDQISKLDRHGGKGGAF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISH---TAQSLKD 120 EI +++G A+HS KDMP + GL I AYL R+D D + T +++ Sbjct: 62 VAEIRADIVAGRSQVAMHSLKDMPGNEETPGLVIGAYLTRDDPTDSLVLRDGITMDQMRE 121 Query: 121 LALHSV-IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN------------KAH 167 + +GT+S+RR A L + +I FRG ++R+ KL+ A Sbjct: 122 TQGDGLKLGTNSVRRAAFLRNLFPNAEIIHFRGAADSRIEKLDKGLMQQLVDGGEVGPAD 181 Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227 ILLA +G+ R+ I + P+ GQG + +E ++ + +E + I+ + Sbjct: 182 GILLATSGMARVGVSDRISHTFTTSEMLPAVGQGIVAVECGSSDWQTREWLARIDDANAR 241 Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 ER L LDG C S IA + +G T+ V+ DG Sbjct: 242 ACAEAEREVLWVLDGHCNSPIAAHSVIEGDTMTMESAVMEIDG 284 >gi|70606576|ref|YP_255446.1| porphobilinogen deaminase [Sulfolobus acidocaldarius DSM 639] gi|68567224|gb|AAY80153.1| porphobilinogen deaminase [Sulfolobus acidocaldarius DSM 639] Length = 296 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 74/214 (34%), Positives = 116/214 (54%), Gaps = 7/214 (3%) Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99 +I + TK D ++ L +G KG+F +E+ + +I+GE D AVHS KDM + + + L + Sbjct: 33 LIVVKTKADLFQDKPLNSLG-KGVFEKEVNEAVINGEADIAVHSMKDMLSDMDEKLVLYG 91 Query: 100 YLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159 LPR+ D ++ + L ++ VIGTSS+RR++++ +R D+ V D RG I+TRL Sbjct: 92 VLPRDSPYDSLVAE--KDLFNIESGKVIGTSSIRRRSMISFYRRDLVVKDLRGNIDTRLK 149 Query: 160 KLNNNKAHAILLAYAGIKRLKKEKVIKEI-LNIEDFPPSPGQGAICIETHVNNPKAQELV 218 K + + I++A A IKRL V++ ++ + P QG I I VN K + L Sbjct: 150 KYQSKEYDGIVIAEAAIKRL--NSVVRYYKIDPKIITPEANQGIIAIVGRVNE-KLKTLF 206 Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252 + +N E T ER + L G C S I A Sbjct: 207 RELNDERTLKEALVERTVVKLLGGGCHSPIGILA 240 >gi|167718597|ref|ZP_02401833.1| porphobilinogen deaminase [Burkholderia pseudomallei DM98] Length = 142 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/129 (44%), Positives = 86/129 (66%), Gaps = 2/129 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 16 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 73 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L + +V+ Sbjct: 74 LESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPVGAVV 133 Query: 128 GTSSLRRKA 136 GTSSLRR+A Sbjct: 134 GTSSLRREA 142 >gi|159906164|ref|YP_001549826.1| porphobilinogen deaminase [Methanococcus maripaludis C6] gi|159887657|gb|ABX02594.1| porphobilinogen deaminase [Methanococcus maripaludis C6] Length = 304 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 78/254 (30%), Positives = 127/254 (50%), Gaps = 20/254 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+ E + L++ + II + T GD+ N+ L ++G G+FT Sbjct: 3 LRIGTRGSTLAMIQT-EYIAGLLNDLGVETE---IIIVKTTGDKDQNKKLVDLG-IGVFT 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ K++ EID AVHS KD+PT LQI+A RE D+ I Sbjct: 58 KELDNKMLENEIDIAVHSLKDVPTLWSDELQIAATPKRESPDDIIIWRKDSDFDIEHDEL 117 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS+RR + L +++ RG + TR++KL + I++A AG+ I Sbjct: 118 NVGTSSIRRTSFLQFTHPNLTPKLLRGNVATRIDKLRKGEYDTIIMAKAGL--------I 169 Query: 186 KEILNIEDFP-------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 ++ +++ +F P+P QG I + + + K E+++ I + T+ ER L Sbjct: 170 RQGIDLSEFNYKKLEILPAPAQGVIGVASRKADAKINEILEKICDKKTYIEATAERWALK 229 Query: 239 ELDGSCKSAIAGFA 252 E G C++ FA Sbjct: 230 EYGGGCQAPFGAFA 243 >gi|300933794|ref|ZP_07149050.1| hypothetical protein CresD4_06949 [Corynebacterium resistens DSM 45100] Length = 355 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 84/274 (30%), Positives = 138/274 (50%), Gaps = 14/274 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD--RITNRTLTEIGG 60 ++ IGTR S LA + ++ + + +IV P GD + + + +IG Sbjct: 27 QRTLLIGTRRSQLATTQSGHVQAGITEQGWASELHIVQTP----GDASQASQIPVAQIG- 81 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP-REDIRDVFISHTAQSLK 119 G+FTE + L + E D AVHS KD+PT K +I +P R D R+V +S + LK Sbjct: 82 VGVFTETLRNALAAKECDVAVHSFKDLPTAPDKRFRI--IVPERVDPREVLVSVDNRLLK 139 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL + +GTS+ RR + L R D+ ++ RG I++R+ ++ + A++LA AG++R+ Sbjct: 140 DLPEGAKVGTSAPRRVSQLRAVRPDLEILPLRGNIDSRMGRVGTD-LDAVILARAGLERV 198 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E L+ P+P QGA+ +E ++ +A + V + H + ERA LA Sbjct: 199 GQLDRAAESLDPHVIMPAPAQGALAVEVRADDDEAWQAVLPLEHLPSHLMAAAERAVLAT 258 Query: 240 LDGSCKSAIAGFAYCKGS---TLYFYGIVLASDG 270 L+ C + +A + GS L V DG Sbjct: 259 LEAGCSAPVAAHSEWTGSDHTELTISAGVFGMDG 292 >gi|319440758|ref|ZP_07989914.1| hypothetical protein CvarD4_03233 [Corynebacterium variabile DSM 44702] Length = 336 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 78/258 (30%), Positives = 124/258 (48%), Gaps = 19/258 (7%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG--GKGLFT 65 IGTR S LA R +L+D + V P GD + + T + G G+FT Sbjct: 7 IGTRASALASTQTGMVRDALVDNGATADLHFVHTP----GD-ASQKAQTPVSRIGVGVFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E + L +GE D AVHS KD+PT I+ PR D R+V +SH +L++L + Sbjct: 62 ETLRNALAAGECDVAVHSFKDLPTAPDPRF-IAVVPPRVDPREVLVSHGNLTLRELPTGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH-----------AILLAYA 174 IGT + RR + + R D+ I RG I+TR+ + + A++LA A Sbjct: 121 KIGTGAPRRVSQIRAVRPDVECISIRGNIDTRMGRAGDGTTSTVVEGGPGDLAAVVLARA 180 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G++R+ E + + D P+P QGA+C+E ++ +A V ++ + ER Sbjct: 181 GLERVGHLDHAAETVAVTDIMPAPAQGALCVEVRADDAEAVAAVLGLDDPASHARAVAER 240 Query: 235 AFLAELDGSCKSAIAGFA 252 LA L+ C + + ++ Sbjct: 241 GVLATLEAGCTAPVGAYS 258 >gi|330945695|gb|EGH47153.1| porphobilinogen deaminase [Pseudomonas syringae pv. pisi str. 1704B] Length = 191 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 60/142 (42%), Positives = 85/142 (59%), Gaps = 2/142 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWR 142 L S++GTSSLRR+A LL R Sbjct: 119 LPAGSIVGTSSLRRQAQLLARR 140 >gi|150402047|ref|YP_001329341.1| porphobilinogen deaminase [Methanococcus maripaludis C7] gi|150033077|gb|ABR65190.1| porphobilinogen deaminase [Methanococcus maripaludis C7] Length = 304 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 77/254 (30%), Positives = 127/254 (50%), Gaps = 20/254 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+ E + L++ + I+ + T GD+ + L ++G G+FT Sbjct: 3 LRIGTRGSTLAMVQT-EYIAGLLNDLGVETE---IVIVKTTGDKDQTKKLVDLG-LGVFT 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ K++ EID AVHS KD+PT LQI+A RE D+ I Sbjct: 58 KELDSKMLENEIDIAVHSLKDVPTLWSDELQITATPKRESPDDIIIWRKDSDFDIEHDEL 117 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS+RR + L +++ RG + TR++KL N + I++A AG+ I Sbjct: 118 DVGTSSIRRTSFLQFTHPNLTPKLLRGNVATRIDKLRNREYDTIIMAKAGL--------I 169 Query: 186 KEILNIEDFP-------PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 ++ +++ +F P+P QG I + + + K E+++ I + T+ ER L Sbjct: 170 RQGIDLSEFNYTKLDMLPAPAQGVIGVASRKADIKINEILEKICDKKTYIEATAERWALK 229 Query: 239 ELDGSCKSAIAGFA 252 E G C++ FA Sbjct: 230 EYGGGCQAPFGAFA 243 >gi|15791132|ref|NP_280956.1| porphobilinogen deaminase [Halobacterium sp. NRC-1] gi|169236887|ref|YP_001690087.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Halobacterium salinarum R1] gi|25453030|sp|Q9HMY5|HEM3_HALSA RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|10581740|gb|AAG20436.1| porphobilinogen deaminase [Halobacterium sp. NRC-1] gi|167727953|emb|CAP14741.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Halobacterium salinarum R1] Length = 396 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 57/161 (35%), Positives = 95/161 (59%), Gaps = 4/161 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + R+ TR S LAL A E +L D H++ ++ + T+GDR+T+ ++++G Sbjct: 1 MSSQQIRLATRGSDLALRQAGEVVDTLEDRR----HDVELVEVETEGDRVTDALISDLGK 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G F ++++++ G +D AVHS KD+PT++ + L ++A RE+ DV ++ L+D Sbjct: 57 TGAFVRALDQEVMEGTVDAAVHSMKDVPTEVPEDLVVAAVPHRENPADVLVTPDGTDLED 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 L SV+GT+SLRR A + R + V RG + TR+ KL Sbjct: 117 LPAGSVVGTASLRRGAQVQAHRPGLDVEPIRGNVGTRVEKL 157 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 1/117 (0%) Query: 155 ETRLNKLNNNKAHAILLAYAGIKRLKK-EKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 ++ + + + + A+++A G++R V E L+ P+ GQGA+C+ ++ Sbjct: 238 QSAMERDPDTEYDALVMARVGLERTGLLHHVGIEELSTGTHVPATGQGALCVTARRDSDV 297 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 L + H T V ER L EL G C + I A +G T+ V + DG Sbjct: 298 VDTLRDALEHVRTRVEVTAERVVLEELGGGCIAPIGVHALVQGDTIRTAVQVFSQDG 354 >gi|239607866|gb|EEQ84853.1| porphobilinogen deaminase [Ajellomyces dermatitidis ER-3] Length = 347 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 96/314 (30%), Positives = 156/314 (49%), Gaps = 18/314 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K F IGTR S LAL R +L NI+ + D++T L E K Sbjct: 18 KTTFTIGTRRSKLALVQTDLVRDALKAAWPQYEFNILTKDAAADLDKVT--PLREFTSKN 75 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119 L+TEE+E+ L++ +ID VHS KD+PT++ + + A +PRED RDV + + +L Sbjct: 76 LWTEELEELLVAKQIDLVVHSLKDVPTQIPETCILGAMMPREDPRDVLVIKKGLPSMTLA 135 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177 +L SV+GTSS+RR A L R + D RG I+TRL KL+ ++LA AG+ Sbjct: 136 ELPAGSVVGTSSVRRIAQLSRHYPQLIAKDVRGNIDTRLAKLDAEDGPFSCLILAAAGLL 195 Query: 178 RLKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R + I L+ + + GQG + IE ++ +++V+ I + T + ER Sbjct: 196 RTGQGDRITYYLDSKHGKMLHAVGQGGLGIEIRADDEHMKQMVEKIGDKKTTLACLAERN 255 Query: 236 FLAELDGSCKSAIA-GFAYCKGS----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 L L+G C + + + + S L IV + DGK E+ ++ + + G Sbjct: 256 LLRTLEGGCSAPLGVETEWVQDSEGKENLRLRAIVASVDGKEAVEIEKDKD----VKSGE 311 Query: 291 DAAQYIRFISNKNV 304 +A + + ++++ V Sbjct: 312 EAEVFGKQVADELV 325 >gi|261198286|ref|XP_002625545.1| porphobilinogen deaminase [Ajellomyces dermatitidis SLH14081] gi|239595508|gb|EEQ78089.1| porphobilinogen deaminase [Ajellomyces dermatitidis SLH14081] Length = 347 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 96/314 (30%), Positives = 156/314 (49%), Gaps = 18/314 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K F IGTR S LAL R +L NI+ + D++T L E K Sbjct: 18 KTTFTIGTRRSKLALVQTDLVRDALKAAWPQYEFNILTKDAAADLDKVT--PLREFTSKN 75 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119 L+TEE+E+ L++ +ID VHS KD+PT++ + + A +PRED RDV + + +L Sbjct: 76 LWTEELEELLVAKQIDLVVHSLKDVPTQIPETCILGAMMPREDPRDVLVIKKGLPSMALA 135 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177 +L SV+GTSS+RR A L R + D RG I+TRL KL+ ++LA AG+ Sbjct: 136 ELPAGSVVGTSSVRRIAQLSRHYPQLIAKDVRGNIDTRLAKLDAEDGPFSCLILAAAGLL 195 Query: 178 RLKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R + I L+ + + GQG + IE ++ +++V+ I + T + ER Sbjct: 196 RTGQGDRITYYLDSKHGKMLHAVGQGGLGIEIRADDEHMKQMVEKIGDKKTTLACLAERN 255 Query: 236 FLAELDGSCKSAIA-GFAYCKGS----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 L L+G C + + + + S L IV + DGK E+ ++ + + G Sbjct: 256 LLRTLEGGCSAPLGVETEWVQDSEGKENLRLRAIVASVDGKEAVEIEKDKD----VKSGE 311 Query: 291 DAAQYIRFISNKNV 304 +A + + ++++ V Sbjct: 312 EAEVFGKQVADELV 325 >gi|302695979|ref|XP_003037668.1| hypothetical protein SCHCODRAFT_255775 [Schizophyllum commune H4-8] gi|300111365|gb|EFJ02766.1| hypothetical protein SCHCODRAFT_255775 [Schizophyllum commune H4-8] Length = 358 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 81/250 (32%), Positives = 128/250 (51%), Gaps = 8/250 (3%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSL--MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 + + F + +R SP+A A + +++L +D P +ST GD+ + L +G Sbjct: 5 QPRTFVLASRKSPMAQAQTVQVQAALRALDTSPSAPKFETSF-MSTAGDKNQVQALYFLG 63 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---Q 116 GK L+T ++E L D VHS KD+PT L +G ++ R++ DV + Sbjct: 64 GKELWTGDLEVALKERAADMLVHSLKDVPTVLPEGFVLAGISERDEPVDVMCVKAGMPWR 123 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYA 174 + ++L SV+GTSS+RR A+L R + +D RG I TRL KL++ A++ A A Sbjct: 124 TPEELPEGSVVGTSSVRRIAMLKRRFPHLKFLDVRGNIATRLAKLDDPALPYAALIAAKA 183 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G+ R+ + I L + + GQGA+ IE ++ +A L K I H + ER Sbjct: 184 GLVRVNLQHRITCDLAPPTYSYAVGQGALGIEVRADDTEALALCKRITHWPSLWRCRAER 243 Query: 235 AFLAELDGSC 244 A L EL+G C Sbjct: 244 ACLRELEGGC 253 >gi|327355808|gb|EGE84665.1| porphobilinogen deaminase [Ajellomyces dermatitidis ATCC 18188] Length = 347 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 96/314 (30%), Positives = 155/314 (49%), Gaps = 18/314 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K F IGTR S LAL R +L NI+ + D++T L E K Sbjct: 18 KTTFTIGTRRSKLALVQTDLVRDALKAAWPQYEFNILTKDAAADLDKVT--PLREFTSKN 75 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119 L+TEE+E+ L++ +ID VHS KD+PT++ + + A +PRED RDV + + +L Sbjct: 76 LWTEELEELLVAKQIDLVVHSLKDVPTQIPETCILGAMMPREDPRDVLVIKKGLPSMTLA 135 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177 +L SV+GTSS+RR A L R + D RG I+TRL KL+ ++LA AG+ Sbjct: 136 ELPAGSVVGTSSVRRIAQLSRHYPQLIAKDVRGNIDTRLAKLDAEDGPFSCLILAAAGLL 195 Query: 178 RLKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R + I L + + GQG + IE ++ +++V+ I + T + ER Sbjct: 196 RTGQGDRITYYLGSKHGKMLHAVGQGGLGIEIRADDEHMKQMVEKIGDKKTTLACLAERN 255 Query: 236 FLAELDGSCKSAIA-GFAYCKGS----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 L L+G C + + + + S L IV + DGK E+ ++ + + G Sbjct: 256 LLRTLEGGCSAPLGVETEWVQDSEGKENLRLRAIVASVDGKEAVEIEKDKD----VKSGE 311 Query: 291 DAAQYIRFISNKNV 304 +A + + ++++ V Sbjct: 312 EAEVFGKQVADELV 325 >gi|56752693|gb|AAW24560.1| SJCHGC02909 protein [Schistosoma japonicum] Length = 268 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 77/215 (35%), Positives = 117/215 (54%), Gaps = 23/215 (10%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-IIPLSTKGDRITNRTLTEIGGKGLFT 65 R+G+R S LAL E SL+ V K PH + ++ ++T GD I + L++IG K LFT Sbjct: 11 RVGSRRSNLALLQT-EMAISLLKVQK--PHIMFEVVEIATVGDEILDVPLSKIGDKSLFT 67 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSLKDLA 122 +E+EK L+ GE+D VHS KD+P+ L GL + R DV + + L DL Sbjct: 68 KELEKSLLVGEVDLVVHSLKDVPSVLPTGLVLGCVFGRSSPEDVVLMAPHNRGMKLSDLP 127 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-----------NKA---HA 168 + + +GTSS+RR A L+R + I RG + TRL KL+ N++ A Sbjct: 128 VGATVGTSSIRRVATLIRKYPHLKFISIRGNLNTRLAKLDTPSNLQKQCCTGNQSLSYDA 187 Query: 169 ILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAI 203 ++LA AG++R+ I ++L+ + S QGA+ Sbjct: 188 LILAKAGVERMGWVDRIDQVLSDSFYAVS--QGAL 220 >gi|307719295|ref|YP_003874827.1| porphyrin biosynthesis protein HemD [Spirochaeta thermophila DSM 6192] gi|306533020|gb|ADN02554.1| porphyrin biosynthesis protein HemD [Spirochaeta thermophila DSM 6192] Length = 672 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 75/234 (32%), Positives = 118/234 (50%), Gaps = 16/234 (6%) Query: 6 FRIGTRCSPLALAHAFET----RSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 R+GTR S LALA E R + + ++ +V+ P +GDR L + G Sbjct: 4 LRLGTRGSRLALAQVREWIARWRDASPEAGEVEWEPMVLHP---RGDRDKRTPLHLVEGS 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIR-DVFISH----TAQ 116 FT+ +++ L+ G ID A+HSAKD+P +L +GL ++A P E R DV + H +A Sbjct: 61 DFFTDALDEALLEGRIDVALHSAKDLPDELREGLSLAAITPLEGPREDVLVLHPRWASAS 120 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 S+ +L IGTSS RR+ L RSD ++D RG IE RL ++++ + +++A + Sbjct: 121 SVDELPAGLRIGTSSARRREQLSHLRSDWELVDIRGTIEERLARVSSGEIDGVVMAKVAL 180 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 RL E + F P P QG + + + + L V++ W V Sbjct: 181 TRLALEVPHLPL----PFVPHPLQGRLAAVVREGDEEVRRLCAVLDDRGRWGRV 230 >gi|29841142|gb|AAP06155.1| similar to GenBank Accession Number P19356 hydroxymethylbilane synthase (hemC) in Rattus sp [Schistosoma japonicum] Length = 277 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 76/215 (35%), Positives = 118/215 (54%), Gaps = 22/215 (10%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-IIPLSTKGDRITNRTLTEIGGKGLFT 65 R+G+R S LAL E SL+ V K PH + ++ ++T GD I + L++IG K LFT Sbjct: 11 RVGSRRSNLALLQT-EMAISLLKVQK--PHIMFEVVEIATVGDEILDVPLSKIGDKSLFT 67 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSLKDLA 122 +E+EK L+ GE+D VHS KD+P+ L GL + R DV + + L DL Sbjct: 68 KELEKSLLVGEVDLVVHSLKDVPSVLPTGLVLGCVFGRSSPEDVVLMAPHNRGMKLSDLP 127 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-----------NKA---HA 168 + + +GTSS+RR A L+R + I RG + TRL KL+ N++ A Sbjct: 128 VGATVGTSSIRRVATLIRKYPHLKFISIRGNLNTRLAKLDTPSNLQKQCCTGNQSLSYDA 187 Query: 169 ILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAI 203 ++LA AG++R+ I ++L+ + F + +GA+ Sbjct: 188 LILAKAGVERMGWVDRIDQVLS-DSFYANELKGAL 221 >gi|254380811|ref|ZP_04996177.1| porphobilinogen deaminase 2 [Streptomyces sp. Mg1] gi|194339722|gb|EDX20688.1| porphobilinogen deaminase 2 [Streptomyces sp. Mg1] Length = 231 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 115/226 (50%), Gaps = 14/226 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV--IIPLSTKGDRITNRTLTEIGGKGL 63 R+GTR SP+AL E DV + +V I+ + ++GDR L+ IGGKG Sbjct: 11 VRLGTRPSPMAL----EQTGRFADVFRARYPQVVLDIVEIVSEGDRHRG-PLSTIGGKGA 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLK--GLQISAYLPREDIRDVFI---SHTAQSL 118 FT ++ L+ G + + AKD+P + G+ I+A LPRED RD + H +L Sbjct: 66 FTRNADRYLLDGRVQATIACAKDVPGPHDRSPGIVIAAVLPREDTRDALVLPTGHPVTTL 125 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGI 176 +L + +GTS+ RR ALL + + RG ++RL L+ + A ++ A AG+ Sbjct: 126 AELPPGTRVGTSAPRRSALLKALHPTLVQVPIRGNADSRLRALDAGRLGADVMIAALAGL 185 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 +RL E EIL+ + P+ G G + +E ++P L+ + Sbjct: 186 RRLGHEDRASEILDPAVWLPAAGAGTVIVEHRSDDPATGWLLAPLT 231 >gi|301167270|emb|CBW26852.1| putative porphobilinogen deaminase [Bacteriovorax marinus SJ] Length = 512 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 81/272 (29%), Positives = 140/272 (51%), Gaps = 28/272 (10%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M KK ++IGTR S LA+ + + L K+ + + T+GD IT++ L ++ G Sbjct: 1 MSKKIYKIGTRGSLLAVTQCTQVKEEL---EKLTGDQFELEIIKTQGDLITDKPLWQLDG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV-FISHTAQSLK 119 K FT+E+++ L++ ++D VHS KD+ ++ +G++++A R D+ FI + +++K Sbjct: 58 KDFFTKELDEALLTNKVDMVVHSYKDLGSERPQGIKLAAITKRHFAHDILFIKN--ETIK 115 Query: 120 DLALHS--VIGTSSLRRKALLLRWRSDISVID--------FRGKIETRLNKLNNNKAHAI 169 +L+ ++GTSS RR + S+ D RG + TR+ KL + + AI Sbjct: 116 NLSNKKEFIVGTSSPRRIVNIEAQLSEYLPTDNIKVETKMLRGNVNTRIGKLVDGQYDAI 175 Query: 170 LLAYAGIKRLK-KEKVIKE-----------ILNIEDFPPSPGQGAICIETHVNNPKAQEL 217 +LA GI+RL EK ++E IL FP + QGA+ IE + N + + Sbjct: 176 VLALPGIERLAHSEKSLEELKVLLKDLNYMILPQSTFPSAASQGALAIECNEENTELYQK 235 Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 +++I + T V+ ER G C A+ Sbjct: 236 LQLIEDKVTVSEVSRERQAFNGYGGGCHLAVG 267 >gi|47224902|emb|CAG06472.1| unnamed protein product [Tetraodon nigroviridis] Length = 344 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 85/268 (31%), Positives = 122/268 (45%), Gaps = 20/268 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA L +++ P ++ I+ +ST GD+I + L++IG K LFT Sbjct: 20 IRIGTRKSQLARIQTDSVAEKLKELY--PDVHLEIVAMSTTGDKILDTALSKIGEKSLFT 77 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L E+D VHS KD+PT L G I A L RE+ D + H ++L L Sbjct: 78 KELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVLKRENPHDAVVLHPKNAGKTLDALP 137 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 HSVIGTSSLRR A L + +DF+ + + L H + +R Sbjct: 138 AHSVIGTSSLRRAAQL---KKRFPHLDFKDIVSSERCFLPVQPGHRCFFLSSRSQRGNLN 194 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +K++ EDF A +N + +++ ED +V E G Sbjct: 195 TRLKKLDEKEDFAAIILAAAGLRRMGWDN----RISQILEPEDCMYAVGQE--------G 242 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG 270 C +A K S LY G V + DG Sbjct: 243 GCSVPVAVHTKVKDSQLYLTGAVYSLDG 270 >gi|260890848|ref|ZP_05902111.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Leptotrichia hofstadii F0254] gi|260859401|gb|EEX73901.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Leptotrichia hofstadii F0254] Length = 193 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/173 (41%), Positives = 96/173 (55%), Gaps = 20/173 (11%) Query: 8 IGTRCSPLALAHAFETRSSLM-------------DVHKIPPHNIVIIPLS---TKGDRIT 51 IGTR S LALA A + + L+ ++ N + I L TKGD+ Sbjct: 8 IGTRGSILALAQAEKVKEMLIKKYDELRENESFCEIEGFEKKNSLEIELKVIVTKGDKDL 67 Query: 52 NRTLTEIGG---KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRD 108 R T+I G K LF +EIEK+++ +ID AVHS KDMP +GL + + RED RD Sbjct: 68 -RDFTKIKGTTQKDLFVKEIEKEMLENKIDLAVHSLKDMPQNTPEGLLNACFPMREDNRD 126 Query: 109 VFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 V +S + LK+L +SVIGT S+RR+ LL R+D+ + RG I TRL KL Sbjct: 127 VLVSKNGKKLKELDENSVIGTGSIRREKELLNLRNDVKIKAIRGNIHTRLKKL 179 >gi|55379657|ref|YP_137507.1| porphobilinogen deaminase [Haloarcula marismortui ATCC 43049] gi|55232382|gb|AAV47801.1| porphobilinogen deaminase [Haloarcula marismortui ATCC 43049] Length = 389 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 59/156 (37%), Positives = 90/156 (57%), Gaps = 4/156 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++ TR S LAL A R SL + ++ + T GD+I + + +G G F Sbjct: 8 LQLATRGSDLALRQAATVRDSLSSRRLA----VELVEVETTGDQIRDELIHRLGKTGAFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +++K++ GE+D AVHS KDMPT+ + L ++A R DV ++ +SL++L + Sbjct: 64 RSLDEKVLDGELDAAVHSMKDMPTERPERLVVAAVPERAAAEDVLVTPDGRSLEELPEGA 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 +GTSSLRRKA LL R D++V RG ++TRL KL Sbjct: 124 TVGTSSLRRKAQLLAERDDLTVEPLRGNVDTRLAKL 159 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 20/157 (12%) Query: 141 WRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK-EILNIEDFPPSPG 199 W D++ + R + + + + AI+LA AG+ R + + L+ + F P+PG Sbjct: 207 WFDDLTEFERRA-----MERDPDVEYDAIVLAKAGLHRAGLTRYVGMSDLDPDQFVPAPG 261 Query: 200 QGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTL 259 QGA+ + T V+ A ++ ++ T ER L EL G C + I A +G + Sbjct: 262 QGALAV-TAVDGDLALDIKDRLDDPQTRIETTVERTILEELGGGCVAPIGVHAQLEGGVV 320 Query: 260 YFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA-AQY 295 + VL+ DG + +++GRD A+Y Sbjct: 321 HTRVRVLSQDG------------TEEVSVGRDVPAEY 345 >gi|27377509|ref|NP_769038.1| porphobilinogen deaminase [Bradyrhizobium japonicum USDA 110] gi|27350653|dbj|BAC47663.1| porphobilinogen deaminase [Bradyrhizobium japonicum USDA 110] Length = 313 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 86/294 (29%), Positives = 133/294 (45%), Gaps = 20/294 (6%) Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-LFTEEIEKKLI 73 +ALA E L +P ++ I+ T GD L GGKG F +I ++ Sbjct: 1 MALAQTEEIARRL--TAAVPGLDVEIVKFDTTGDLDQTSKLLPHGGKGGAFVAQIRAAVL 58 Query: 74 SGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV----IG 128 SGE+ A+HS KDMP + GL I A L R+ D + +L+ L IG Sbjct: 59 SGELQAAMHSLKDMPGNEDTPGLVIGATLSRDPPSDALVLRDGVTLEALRQSRGKGFKIG 118 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK------------AHAILLAYAGI 176 T+++RR A R D+ VI FRG +TR+ KL+N + A A+++A +G+ Sbjct: 119 TNAVRRAAYARRLFPDVEVIHFRGAADTRVRKLDNGEKQRLPDGGAVGPADALIMARSGL 178 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ I + P+ GQG + +E + + ++++ I+ + ER Sbjct: 179 DRVGLASRIAYEFTPAEMLPAAGQGIVAVECAAQDWQTRKILSSIDDPAAHACADAEREV 238 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 L L+G C S +AGF+ G + VL G E SR G+ +GR Sbjct: 239 LWVLNGHCNSPVAGFSTIAGDQMSLTASVLDLSGNTIIEASRTGSANRPRELGR 292 >gi|119174394|ref|XP_001239558.1| hypothetical protein CIMG_09179 [Coccidioides immitis RS] Length = 331 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 91/292 (31%), Positives = 143/292 (48%), Gaps = 14/292 (4%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+K F IGTR S LAL R++L P + GD L K Sbjct: 5 ERKTFTIGTRKSQLALVQTDLVRNALQ--AAFPDCEFKVHSRDAAGDLNKVTPLRAFTTK 62 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118 L+TEE+E+ LI+ ++D V+S KD+PT++ ++A + RE+ RDV + + +L Sbjct: 63 NLWTEELEELLIAKQVDLVVNSLKDIPTQIPSACVLAAVMKRENPRDVLVLKKGLPSMTL 122 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGI 176 +L SV+GTSS+RR A L R + V D RG I+TRL KL+ ++LA AG+ Sbjct: 123 AELPPGSVVGTSSVRRIAQLARHYPHLKVQDVRGNIDTRLAKLDAQDGPFSCLILAAAGL 182 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R +E I + L+ + + GQG + IE ++ ++++ I T + ER Sbjct: 183 LRTGREDRISQYLDSTNGKMLHAVGQGGLGIEIRTDDEVMRDMLNKIGDVKTTYTCLAER 242 Query: 235 AFLAELDGSCKSAIA-GFAYCKGST----LYFYGIVLASDGKIFHEVSRNGN 281 + L L+G C + + + + L IV + DGK E+ +GN Sbjct: 243 SLLRILEGGCSAPLGVETEWIQDDNGKDLLRLRSIVTSVDGKEAVEIEEDGN 294 >gi|225684419|gb|EEH22703.1| porphobilinogen deaminase [Paracoccidioides brasiliensis Pb03] Length = 347 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 91/275 (33%), Positives = 134/275 (48%), Gaps = 16/275 (5%) Query: 11 RCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEK 70 R S LAL RSSL P + + T GD L E K L+TEE+E+ Sbjct: 26 RKSKLALLQTDLIRSSLKAAW--PEYEFRVHSQDTAGDLNKVTPLREFTTKNLWTEELEE 83 Query: 71 KLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVI 127 L++ +ID VHS KD+PT+L K + A +PRED RDV + +L +L SV+ Sbjct: 84 LLVAKKIDFVVHSLKDVPTQLPKPCALGAVVPREDPRDVLVIKKGLPKMTLAELPAGSVV 143 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVI 185 GTSS+RR A L R + D RG IETRL KL+ + I+LA AG+ R + I Sbjct: 144 GTSSVRRIAQLSRHYPHLKPQDIRGNIETRLAKLDAEDGPFTCIILAAAGLLRTGQGARI 203 Query: 186 KEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 L+ ++ + GQGA+ +E ++ + + +++ I + ER+ L L+G Sbjct: 204 SHFLDSKNGKMLHAVGQGALGVEIRADDERMRAMIEKIGDRRATFACLAERSLLRTLEGG 263 Query: 244 CKSAIA-------GFAYCKGSTLYFYGIVLASDGK 271 C + + G + L IV + DGK Sbjct: 264 CSAPLGVETEWVKGEGQGEVEKLRLRAIVASVDGK 298 >gi|45644676|gb|AAS73064.1| predicted porphobilinogen deaminase [uncultured marine gamma proteobacterium EBAC20E09] Length = 291 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 82/251 (32%), Positives = 128/251 (50%), Gaps = 21/251 (8%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +I +R S LALA E V K + II + T+GD I + + K F Sbjct: 2 TIKIASRSSKLALAQVEEF------VKKFGISDYKIIKVKTEGD-IKSANGETLFDKAHF 54 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +++K L++GE D AVHSAKD P GL + +LP + +DV I Sbjct: 55 VSDVQKCLLNGEADIAVHSAKDTPAGETTGL-LRYFLPSQSNQDVLIFREEDKFNS---E 110 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +GTSSLRR+ + I++++ G ++TRL KL+ + I+LA AG+ RL K+ Sbjct: 111 MKLGTSSLRRQLQAKHHLNAINIVNLSGNVDTRLEKLSQGEYDCIILAKAGLARL---KL 167 Query: 185 IKEI-LNIEDFPPSPGQGAICIETHVNNPKA---QELVKVINHED--TWDSVNCERAFLA 238 + E+ + D+ + GQG +CIE +N+P A L+K I D +++ ER+ L Sbjct: 168 LNELQYEVMDWSTASGQGFLCIEV-LNDPSADIYNFLLKSIREIDLNLGKNISTERSILE 226 Query: 239 ELDGSCKSAIA 249 ++ C SAI+ Sbjct: 227 AINAGCNSAIS 237 >gi|87886445|dbj|BAE79637.1| porphobilinogen deaminase [Danio rerio] Length = 203 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 66/161 (40%), Positives = 91/161 (56%), Gaps = 7/161 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV-IIPLSTKGDRITNRTLTEIGGKGLF 64 R+GTR S LA +T S + + ++ P + I+ +ST GD+I + L++IG K LF Sbjct: 20 IRVGTRKSQLA---RIQTDSVVEKLKELYPDVLFEIVAMSTTGDKILDTALSKIGEKSLF 76 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T+E+E L E+D VHS KD+PT L G I A L RE+ D + H + L L Sbjct: 77 TKELENALEKNEVDLVVHSLKDLPTVLPGGFTIGAVLKRENPHDAVVLHPKNKGKRLDSL 136 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 + SVIGTSSLRR A L + + D RG + TRL KL+ Sbjct: 137 SNKSVIGTSSLRRAAQLKKRXXHLEFKDIRGNLNTRLKKLD 177 >gi|225561829|gb|EEH10109.1| porphobilinogen deaminase [Ajellomyces capsulatus G186AR] Length = 345 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 99/315 (31%), Positives = 157/315 (49%), Gaps = 18/315 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K F IGTR S LAL R +L +I+ + D++T L E K Sbjct: 18 KTTFTIGTRKSKLALVQTDLVRDALKAAWPQYEFDILTKDAAADLDKVT--PLREFTSKN 75 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 L+TEE+E+ L++ +ID VHS KD+PT++ + A +PRED RDV + +L Sbjct: 76 LWTEELEELLLAKQIDLVVHSLKDVPTQIPTTCILGAMMPREDPRDVLVIKKGLPNMTLA 135 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177 +L S++GTSS+RR A L R + D RG I+TRL KL+ A++LA AG+ Sbjct: 136 ELPAGSIVGTSSVRRIAQLSRHYPHLIAKDVRGNIDTRLTKLDAQDGPFSALILAAAGLL 195 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R + I L+ +D + GQG + IE N+ + +E+V+ I T + ER Sbjct: 196 RTGQGARISHYLDSKDGKMLHAVGQGGLGIEIRANDERMKEMVEKIGDRKTTFACLAERN 255 Query: 236 FLAELDGSCKSAIA-GFAYCKGS----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 L L+G C + + + +G+ TL IV + DGK E+ + + + G Sbjct: 256 LLRTLEGGCSAPLGVETEWVQGAEGKETLMLRAIVSSVDGKEAVEI----EKVEKVTSGE 311 Query: 291 DAAQYIRFISNKNVF 305 +A + + ++++ V Sbjct: 312 EAEVFGKKVADELVV 326 >gi|332295808|ref|YP_004437731.1| porphobilinogen deaminase [Thermodesulfobium narugense DSM 14796] gi|332178911|gb|AEE14600.1| porphobilinogen deaminase [Thermodesulfobium narugense DSM 14796] Length = 297 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 82/245 (33%), Positives = 131/245 (53%), Gaps = 14/245 (5%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTK-GDRITNRTLTEIGGKGLFTE 66 IGTR S LAL A R ++K + I + GD++ L E +GLF + Sbjct: 7 IGTRGSKLALTQA---RYVAEFINKFDSTIKIEIKIIKTTGDKLM-VALHEAPERGLFVK 62 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLAL 123 EIE+ L++ +ID AVHS KDMP + + L+I A RED DV + + ++L D++ Sbjct: 63 EIEEALLNKDIDLAVHSMKDMPAEAVSELEIFAVPVREDPSDVIVPRKELSIENLDDISP 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--KK 181 +SV TSSLRR +LL + + + D RG I+TRL KL+ +++A A + RL K+ Sbjct: 123 NSVFATSSLRRISLLNNFFTFKEIKDIRGNIDTRLKKLDEGFCDYLIMAKAALNRLGIKR 182 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNN-PKAQELVKVINHEDTWDSVNCERAFLAEL 240 + L+ F P+ QGA+ I+ + + +++K ++ +T S + ER L + Sbjct: 183 NYI---TLDPFTFVPAVAQGALAIQGRRKDFNRFAKIIKFLDDFNTRISTDIERRVLKLI 239 Query: 241 DGSCK 245 G C+ Sbjct: 240 GGGCQ 244 >gi|257052010|ref|YP_003129843.1| porphobilinogen deaminase [Halorhabdus utahensis DSM 12940] gi|256690773|gb|ACV11110.1| porphobilinogen deaminase [Halorhabdus utahensis DSM 12940] Length = 373 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 86/324 (26%), Positives = 134/324 (41%), Gaps = 64/324 (19%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 FR+ TR S LAL R +L H + ++ + T GD + + + +G G F Sbjct: 8 FRLATRGSDLALRQTGAIRDALESRR----HEVELLEVETTGDELRDELIHRLGKTGAFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +++++ +GE D AVHS KD+PT+ +GL ++A R DV ++ L DL + Sbjct: 64 HSLDERVRAGEADAAVHSLKDVPTEDREGLTVAAVPERAPANDVLVTPDGTDLDDLPEGA 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL------------------------ 161 +GTSSLRR+A LL R D+ V RG ++TR+ KL Sbjct: 124 TVGTSSLRRRAQLLAERPDLDVQPLRGNVDTRVEKLLAPTLKAEYTARLDAQESEETTEN 183 Query: 162 --NNNKAHAILLA------YAGIKRLKKEKVIKEI------------------------- 188 + KA + G+ ++++ +E+ Sbjct: 184 GDDETKATGQTFEQSFDDWFNGLAEIERKATAREVDTEYDAIVLAEAGLDRLGLTHHLDF 243 Query: 189 --LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L E F PSPGQG + + A+ + +I+ T ER L L G C + Sbjct: 244 QALPDEQFVPSPGQGVVAVVAEEGE-AAEAIRDIIDDARTRVEATVERTILETLGGGCVA 302 Query: 247 AIAGFAYCKGSTLYFYGIVLASDG 270 I A +G + VLA DG Sbjct: 303 PIGVRAVFQGRVVTTTVRVLAPDG 326 >gi|303314269|ref|XP_003067143.1| porphobilinogen deaminase family protein [Coccidioides posadasii C735 delta SOWgp] gi|240106811|gb|EER24998.1| porphobilinogen deaminase family protein [Coccidioides posadasii C735 delta SOWgp] gi|320037407|gb|EFW19344.1| porphobilinogen deaminase [Coccidioides posadasii str. Silveira] Length = 331 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 90/292 (30%), Positives = 143/292 (48%), Gaps = 14/292 (4%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+K F IGTR S LAL R++L P + GD L K Sbjct: 5 ERKTFTIGTRKSQLALVQTDLVRNALQ--AAFPDCEFKVHSRDAAGDLNKVTPLRAFTTK 62 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118 L+TEE+E+ LI+ ++D V+S KD+PT++ ++A + RE+ RDV + + +L Sbjct: 63 NLWTEELEELLIAKQVDLVVNSLKDIPTQIPTACVLAAVMKRENPRDVLVLKKGLPSMTL 122 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGI 176 +L SV+GTSS+RR A L R + V D RG I+TRL KL+ ++LA AG+ Sbjct: 123 AELPPGSVVGTSSVRRIAQLARHYPHLKVQDVRGNIDTRLAKLDAQDGPFSCLILAAAGL 182 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R +E I + L+ + + GQG + IE ++ ++++ I T + ER Sbjct: 183 LRTGREDRISQYLDSTNGKMLHAVGQGGLGIEIRTDDEVMRDMLNKIGDVKTTYACLAER 242 Query: 235 AFLAELDGSCKSAIA-GFAYCKGST----LYFYGIVLASDGKIFHEVSRNGN 281 + L L+G C + + + + L IV + DGK E+ +G+ Sbjct: 243 SLLRILEGGCSAPLGVETEWIQDDNGKDLLRLRSIVTSVDGKEAVEIEEDGD 294 >gi|297622583|ref|YP_003704017.1| Hydroxymethylbilane synthase [Truepera radiovictrix DSM 17093] gi|297163763|gb|ADI13474.1| Hydroxymethylbilane synthase [Truepera radiovictrix DSM 17093] Length = 284 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 6/248 (2%) Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109 I+ RTL GG +E+ L G I AV S +P L GL ++A R + R Sbjct: 34 ISQRTLQSRGG----ADELLHALQGGRIHIAVQSLDTLPLTLPDGLSVAAVTKRLEPRSA 89 Query: 110 FISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAI 169 ++ A+SL DL + +G +LR +A +L R D+ V F G++E L L+ + A+ Sbjct: 90 LLARGAKSLGDLPKGAEVGVPTLRDRAFVLAARRDLKVRVFTGELEDALALLSAQELGAL 149 Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 + A +L + + + +L + PP+PGQGA+ + ++ A +L + H ++D Sbjct: 150 VWPSAPFIQLGQRERVTTLLEPQQLPPAPGQGALALVVRDDDDLASDLAYTLQHRPSFDR 209 Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 ERAF ++ S I FA L+ G +G + G+ +A + Sbjct: 210 ACAERAFARQMSSSAHH-IGAFASVTADGELHLLGAAARDEGDWMIQAEVTGDAAEAEEL 268 Query: 289 GRDAAQYI 296 GR+ AQ + Sbjct: 269 GRELAQDV 276 >gi|110669321|ref|YP_659132.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Haloquadratum walsbyi DSM 16790] gi|109627068|emb|CAJ53547.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Haloquadratum walsbyi DSM 16790] Length = 394 Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 60/158 (37%), Positives = 88/158 (55%), Gaps = 6/158 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 + TR S LAL A + +L D + + +I + T+GD+I + + ++G G F Sbjct: 11 LTLATRGSDLALKQATSVQEALTDER----YEVDLIEVETRGDQIQDELIHQLGKTGAFV 66 Query: 66 EEIEKKLI--SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 ++KK++ + E D AVHS KDMPT L ++ R D+ I+ Q L DL Sbjct: 67 RALDKKVLDPTAEADAAVHSMKDMPTDSPDDLVVAGIPQRAPPGDLLITTDGQRLSDLPS 126 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 + IGTSSLRR+A LL R+DI+V RG I+TR+ KL Sbjct: 127 GATIGTSSLRRQAQLLDQRTDITVEPLRGNIDTRIEKL 164 >gi|154283391|ref|XP_001542491.1| porphobilinogen deaminase [Ajellomyces capsulatus NAm1] gi|150410671|gb|EDN06059.1| porphobilinogen deaminase [Ajellomyces capsulatus NAm1] Length = 345 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 97/288 (33%), Positives = 143/288 (49%), Gaps = 14/288 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K F IGTR S LAL R +L +I+ + D++T L E K Sbjct: 18 KTTFTIGTRKSKLALVQTDLVRDALKAAWPQYEFDILTKDAAADLDKVT--PLREFTSKN 75 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 L+TEE+E+ L++ +ID VHS KD+PT++ K + A +PRED RDV + +L Sbjct: 76 LWTEELEELLLAKQIDLVVHSLKDVPTQIPKTCILGAMMPREDPRDVLVIKKGLPNMTLA 135 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177 +L S++GTSS+RR A L R + D RG I+TRL KL+ A++LA AG+ Sbjct: 136 ELPAGSIVGTSSVRRIAQLSRHYPHLIAKDVRGNIDTRLAKLDAQDGPFSALILAAAGLL 195 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R + I L+ +D + GQG + IE N+ + +E+V+ I T + ER Sbjct: 196 RTGQGARISHYLDSKDGKMLHAVGQGGLGIEIRANDERMKEMVEKIGDRKTTFACLAERN 255 Query: 236 FLAELDGSCKSAIA----GFAYCKG-STLYFYGIVLASDGKIFHEVSR 278 L L+G C + + G TL IV + DGK E+ + Sbjct: 256 LLRTLEGGCSAPLGVETEWVQDADGKETLMLRAIVSSVDGKEAVEIEK 303 >gi|240275436|gb|EER38950.1| porphobilinogen deaminase [Ajellomyces capsulatus H143] Length = 345 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 98/315 (31%), Positives = 155/315 (49%), Gaps = 18/315 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K F IGTR S LAL R +L +I+ + D++T L E K Sbjct: 18 KSTFTIGTRKSKLALVQTDLVRDALKAAWPQYEFDILTKDAAADLDKVT--PLREFTSKN 75 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 L+TEE+E+ L++ +ID VH+ KD+PT++ + A +PRED RDV + +L Sbjct: 76 LWTEELEELLLAKQIDLVVHALKDVPTQIPTTCILGAMMPREDPRDVLVIKKGLPNMTLA 135 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177 +L S++GTSS+RR A L R + D RG I+TRL KL+ A++LA AG+ Sbjct: 136 ELPAGSIVGTSSVRRIAQLSRHYPHLIAKDVRGNIDTRLTKLDAQDGPFSALILAAAGLL 195 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R + I L+ +D + GQG + IE N+ + +E+V+ I T + ER Sbjct: 196 RTGQGARISHYLDSKDGKMLHAVGQGGLGIEIRANDERMKEMVEKIGDRKTTFACLAERN 255 Query: 236 FLAELDGSCKSAIA----GFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 L L+G C + + +G TL IV + DGK E+ + + + G Sbjct: 256 LLRTLEGGCSAPLGVETEWVQDAEGKETLMLRAIVSSVDGKEAVEI----EKVEKVTSGE 311 Query: 291 DAAQYIRFISNKNVF 305 +A + + ++++ V Sbjct: 312 EAEVFAKKVADELVV 326 >gi|325091275|gb|EGC44585.1| porphobilinogen deaminase [Ajellomyces capsulatus H88] Length = 352 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 98/315 (31%), Positives = 155/315 (49%), Gaps = 18/315 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K F IGTR S LAL R +L +I+ + D++T L E K Sbjct: 25 KSTFTIGTRKSKLALVQTDLVRDALKAAWPQYEFDILTKDAAADLDKVT--PLREFTSKN 82 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 L+TEE+E+ L++ +ID VH+ KD+PT++ + A +PRED RDV + +L Sbjct: 83 LWTEELEELLLAKQIDLVVHALKDVPTQIPTTCILGAMMPREDPRDVLVIKKGLPNMTLA 142 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIK 177 +L S++GTSS+RR A L R + D RG I+TRL KL+ A++LA AG+ Sbjct: 143 ELPAGSIVGTSSVRRIAQLSRHYPHLIAKDVRGNIDTRLTKLDAQDGPFSALILAAAGLL 202 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R + I L+ +D + GQG + IE N+ + +E+V+ I T + ER Sbjct: 203 RTGQGARISHYLDSKDGKMLHAVGQGGLGIEIRANDERMKEMVEKIGDRKTTFACLAERN 262 Query: 236 FLAELDGSCKSAIA----GFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 L L+G C + + +G TL IV + DGK E+ + + + G Sbjct: 263 LLRTLEGGCSAPLGVETEWVQDAEGKETLMLRAIVSSVDGKEAVEI----EKVEKVTSGE 318 Query: 291 DAAQYIRFISNKNVF 305 +A + + ++++ V Sbjct: 319 EAEVFAKKVADELVV 333 >gi|325526662|gb|EGD04197.1| porphobilinogen deaminase [Burkholderia sp. TJI49] Length = 141 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 52/123 (42%), Positives = 78/123 (63%), Gaps = 2/123 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 21 IASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKE 78 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+ Sbjct: 79 LENALADGRADLAVHSLKDVPMALPDGFSLAAIMSREDPRDAFVSNDYASLDALPAGAVV 138 Query: 128 GTS 130 GTS Sbjct: 139 GTS 141 >gi|218673006|ref|ZP_03522675.1| porphobilinogen deaminase [Rhizobium etli GR56] Length = 111 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 45/107 (42%), Positives = 69/107 (64%) Query: 200 QGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTL 259 QGAICIE+ V + +L+ +N T+D+V+CERAFLA LDGSC++ I G+A C+G + Sbjct: 2 QGAICIESRVGDTGIDDLLAAVNDAATFDTVSCERAFLAALDGSCRTPIGGYAVCEGDLI 61 Query: 260 YFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 F G+++ DG+ H V+ +G+R DA +G A Q +R + F+ Sbjct: 62 RFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARAGSAFFD 108 >gi|183220566|ref|YP_001838562.1| porphobilinogen deaminase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910676|ref|YP_001962231.1| bifunctional porphobilinogen deaminase/uroporphyrinogen synthase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775352|gb|ABZ93653.1| Bifunctional porphobilinogen deaminase/uroporphyrinogen synthase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778988|gb|ABZ97286.1| Porphobilinogen deaminase (PBG; Hydroxymethylbilane synthase) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 511 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 86/311 (27%), Positives = 145/311 (46%), Gaps = 41/311 (13%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +IG R S L+ ++L + +K N I + GD+ L + GG+G+FT+ Sbjct: 6 KIGGRSSLLSRIQIHTVTNALKEKNK--DLNFETIFRESSGDKDLTTPLWQFGGQGIFTK 63 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 ++++ L++ ++D +HS KDM K K + LPRED+RDV + + + +L Sbjct: 64 DLQEDLLNHKVDIVIHSYKDMDLKERKETTLIPVLPREDVRDVLLFKKNKWI-NLPNEIT 122 Query: 127 IGTSSLRR----KALLLRW------RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 I TSS RR K L + +I + RG I+TRL K ++++ IL+A A + Sbjct: 123 ILTSSPRREYHIKEFLRNYFPTPINNFEIKIESVRGNIQTRLRKYLDHESGGILVAKAAL 182 Query: 177 KRL--------------KKEKVIKEILNI--------EDFPPSPGQGAICIETHVNNPKA 214 R+ + +++IK+ +N+ FP +P QGA+C E + Sbjct: 183 DRILNFQDPDQLLPELKEIQQLIKDTMNVSLFMVLPSSIFPSAPAQGALCAEIRKEDKHL 242 Query: 215 QELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK--GSTLYFYGIVLASDGKI 272 + L+ I+ +T + N ER L+ G C I + G + GI DG+I Sbjct: 243 ETLLSKISDSETNLTTNEEREILSRYGGGCHQKIGVTVLHREYGKVCFIRGI--TEDGQI 300 Query: 273 FH--EVSRNGN 281 E+S + N Sbjct: 301 LQTKELSESPN 311 >gi|76801314|ref|YP_326322.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Natronomonas pharaonis DSM 2160] gi|76557179|emb|CAI48754.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Natronomonas pharaonis DSM 2160] Length = 361 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 54/156 (34%), Positives = 83/156 (53%), Gaps = 4/156 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+ TR S LAL A +L + + ++ + T GD + + + +G G F Sbjct: 5 IRLATRGSDLALRQAQRVADALDSRRR----TVELVEVETTGDAVRDELIHRLGKTGAFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +++K+I G++D AVHS KDMPT+ L ++ R DV ++ +L L + Sbjct: 61 RSLDEKVIDGDVDAAVHSMKDMPTEFPDELVVAGVPERASPGDVLVTPDGDTLDSLPDGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 +GTSSLRRKA LL R D+ V RG ++TR+ KL Sbjct: 121 TVGTSSLRRKAQLLAARPDLDVQPLRGNVDTRVQKL 156 >gi|293194091|ref|ZP_06609931.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Actinomyces odontolyticus F0309] gi|292819785|gb|EFF78795.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Actinomyces odontolyticus F0309] Length = 177 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 13/170 (7%) Query: 1 MEKKPFRIGTRCSPLALAHAF-------ETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR 53 M + F +GTR S LALA + E + L + ++ N+ ++ T GD ++ Sbjct: 1 MTTRTFVLGTRGSRLALAQSTTVARAIEEAGARLGEEVRV---NLEVV--RTHGD-VSAE 54 Query: 54 TLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH 113 L +GG G+F ++ L+ GE D AVHS KD+PT GL+I+A RED RD + Sbjct: 55 PLAALGGVGVFAAQLRLALLGGECDLAVHSFKDLPTAPTPGLRIAAVPQREDPRDALCAA 114 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN 163 +L L +++GT S RR A +L R D+ V D RG + TRL+++ Sbjct: 115 DGATLASLPEGALVGTGSPRRAAQVLAARPDLFVCDLRGNVPTRLSRVRG 164 >gi|159483239|ref|XP_001699668.1| porphobilinogen deaminase [Chlamydomonas reinhardtii] gi|158281610|gb|EDP07364.1| porphobilinogen deaminase [Chlamydomonas reinhardtii] Length = 380 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 75/234 (32%), Positives = 121/234 (51%), Gaps = 11/234 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVI--IPLSTKGDRITNRTLTEIGG 60 ++P I TR S LA + + L+ ++ + + + L+++GD +L +G Sbjct: 60 QRPLVIATRPSKLAKEQTRQVQQLLLAAAQLKDEQLQLSTLELASRGDTTQGVSLRSLG- 118 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G FTEE+++ ++SG D +VHS KD P L GL ++A LPR D RDV I+ A SL + Sbjct: 119 SGAFTEELDQAVLSGAADMSVHSLKDCPAALAPGLLLAACLPRADPRDVLIAPEATSLGE 178 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S +GTSS RR A + + V+ RG +++RL ++ + A +LA AG+KRL Sbjct: 179 LVPGSRVGTSSSRRAAQIKHSFPHLQVVQLRGNVDSRLGRIRSRDIGATVLAAAGLKRLG 238 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 ++N D + GA+ + ++ L+ I+H T V ER Sbjct: 239 -------VMN-SDEGDTTATGAVGVVCRADDEWVVGLLDAISHRGTALEVAAER 284 >gi|62999515|gb|AAY25186.1| putative porphobilinogen deaminase [Streptomyces nodosus subsp. asukaensis] Length = 167 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 57/159 (35%), Positives = 88/159 (55%), Gaps = 8/159 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 KP R+GTR S LA+A + + V ++ + ++ ++T GD I+ L +IGG G+ Sbjct: 13 KPLRLGTRRSKLAMAQSGMVADA---VSEVTGRAVELVEVTTYGD-ISREHLAQIGGTGV 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F + L+ GE+D AVHS KD+PT +GL ++A RED RDV ++ + + L Sbjct: 69 FVAALRDALLRGEVDFAVHSLKDLPTAQPEGLVLAAVPVREDPRDVLVARDGLTFEQLPS 128 Query: 124 HSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRL 158 + IGT S RR A L + DI + RG ++TR+ Sbjct: 129 GARIGTGSPRRMAQLNAYARNHGLDIETVPIRGNVDTRI 167 >gi|47200553|emb|CAF87716.1| unnamed protein product [Tetraodon nigroviridis] Length = 199 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 64/174 (36%), Positives = 89/174 (51%), Gaps = 28/174 (16%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P ++ I+ +ST GD+I + L++IG K LFT+E+E L E+D VHS KD+PT L Sbjct: 20 PDVHLEIVAMSTIGDKILDTALSKIGEKSLFTKELENALERNEVDLVVHSLKDLPTSLPP 79 Query: 94 GLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDF 150 G I A L RE+ D + H ++L L HSVIGTSSLRR A L + + D Sbjct: 80 GFTIGAVLKRENPHDAVVLHPKNAGKTLDALPAHSVIGTSSLRRAAQLKKRFPHLDFKDI 139 Query: 151 ------------------------RGKIETRLNKLNNNKAH-AILLAYAGIKRL 179 RG + TRL KL+ + AI+ A AG++R+ Sbjct: 140 VSSERCFLPVQPGHRCFFLSSRSQRGNLNTRLKKLDEKEDFAAIISAAAGLRRM 193 >gi|282892112|ref|ZP_06300587.1| hypothetical protein pah_c207o043 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498007|gb|EFB40351.1| hypothetical protein pah_c207o043 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 221 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 5/217 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 + R SPL+ A E + +L H P ++ + ++T GD+ +L + FT+E Sbjct: 1 MAARESPLSKAQVLEVQQALHPHH--PMIELIPVWVATTGDKQQEISLRNMEKTDFFTKE 58 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 ++ L+SG+ D AVHSAKD+P L +GL + A D RDV + SL L ++I Sbjct: 59 LDALLLSGQCDVAVHSAKDLPDPLPQGLSLIALTEGVDNRDVLVIREGLSLAALPQAAMI 118 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 TSS RR+ R+D +D RG I RL+ L A I++A A + RL + + Sbjct: 119 ATSSERREQQARMLRTDFRFMDLRGTIGQRLSLLEAGVADGIIVAEAALIRLGLCHLNRV 178 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224 L E +P QG + I + + +E+ ++ E Sbjct: 179 YLPGET---APMQGRLAILAKTEHVEMREIFACLDAE 212 >gi|307826231|ref|ZP_07656440.1| Porphobilinogen deaminase [Methylobacter tundripaludum SV96] gi|307732693|gb|EFO03561.1| Porphobilinogen deaminase [Methylobacter tundripaludum SV96] Length = 155 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 78/135 (57%) Query: 156 TRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215 TRL+KL++ + AI+LA AG+KRL + I + L+ P+ GQGAI IE +++P+ Sbjct: 1 TRLSKLDSGEYDAIILASAGLKRLGMAERITQCLDTSVSLPAIGQGAIGIECRIDDPEIN 60 Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275 E++ ++ +T V ERA A L G C+ IAGFA +G L+ G+V + DG + + Sbjct: 61 EMLSALHDSETGLCVAAERAMNARLSGGCQVPIAGFATMQGEQLFMRGLVGSPDGSVIYR 120 Query: 276 VSRNGNRCDAINIGR 290 R + A IG+ Sbjct: 121 AERTDSVDSAEAIGK 135 >gi|297170589|gb|ADI21615.1| porphobilinogen deaminase [uncultured myxobacterium HF0130_06F04] Length = 197 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 6/161 (3%) Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSSLRRKA LL R D+ ++D RG + TR NK + + A++LA AG+ RL+ K + Sbjct: 15 VGTSSLRRKAHLLSKRPDLVMVDIRGNVPTRFNKAVSGELDAVILAEAGLTRLEMGKQAE 74 Query: 187 E------ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +++ P+P QGA+ I+T ++ +A +K ++H T V ER L E Sbjct: 75 NQGVRLVPIDVASVCPAPAQGALAIQTRSDDERAHAALKALHHPGTAACVEVERLLLGEF 134 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281 G C + + +V + DG E GN Sbjct: 135 GGGCHLPLGAHCTVENGEYTLVALVASPDGGERFEARSTGN 175 >gi|47779350|gb|AAT38579.1| predicted porphobilinogen deaminase [uncultured gamma proteobacterium eBACHOT4E07] Length = 286 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 83/254 (32%), Positives = 127/254 (50%), Gaps = 28/254 (11%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +I TR S LALA E + + I + I I + T+GD +++ T + K F Sbjct: 2 TLKIATRSSKLALAQVDE----FVSEYNISDYKI--IKIKTEGDVKSSKGET-LFDKAHF 54 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI----SHTAQSLKD 120 +I+K ++ G+ D AVHSAKD P K G++ + + R +DV I ++ S+K Sbjct: 55 VTDIQKSILRGDADIAVHSAKDTPAKKTNGIERNFIISRTS-KDVLIFKDNNNFNSSMK- 112 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 +GTSSLRRK + +V D G ++TRL KL I+LA AG++RL+ Sbjct: 113 ------LGTSSLRRKLQAFHFLKSTNVFDINGNVDTRLEKLYRGDYDCIILAKAGLERLR 166 Query: 181 KEKVIKEILNIE--DFPPSPGQGAICI---ETHVNNPKAQELVKVINHEDTWDSVNCERA 235 K LN E D+ + GQG + + E++ N K E+ I ++ + + ER Sbjct: 167 LLKE----LNYEEMDWITASGQGTLAVEMTESYHENEKLLEIHSNIKNKLATNGIEYERN 222 Query: 236 FLAELDGSCKSAIA 249 L +D C SAIA Sbjct: 223 ILERVDAGCNSAIA 236 >gi|315186776|gb|EFU20534.1| uroporphyrin-III C-methyltransferase [Spirochaeta thermophila DSM 6578] Length = 661 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 11/194 (5%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 L +GDR L + G FT+ +++ L+ G ID A+HSAKD+P L +GL ++A P Sbjct: 31 LHPRGDRDKRTPLHLVEGSDFFTDALDEALLVGRIDVALHSAKDLPDDLREGLSLAAITP 90 Query: 103 REDIR-DVFISH----TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETR 157 E R DV + H +A S+++L IGTSS RR+ L RSD ++D RG IE R Sbjct: 91 LEGPREDVLVLHPRWASASSVEELPAGLRIGTSSARRREQLSHLRSDWELVDIRGTIEER 150 Query: 158 LNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE-DFPPSPGQGAICIETHVNNPKAQE 216 L ++++ + +++A ++ E+ ++ F P P QG + + +A Sbjct: 151 LARVSSGEIDGVVMAAL-----ALTRLALEVPHLPLPFVPHPLQGRLAAVVREGDEEAHR 205 Query: 217 LVKVINHEDTWDSV 230 L V++ W V Sbjct: 206 LCDVLDDRGRWGRV 219 >gi|25010019|gb|AAN71175.1| GH12864p [Drosophila melanogaster] Length = 558 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 14/192 (7%) Query: 95 LQISAYLPREDIRDVFI---SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFR 151 + I A L RED RD + + ++ L SVIGTSSLRR A + R ++V D R Sbjct: 1 MAIGAVLEREDARDALVLRENFKGHTIASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIR 60 Query: 152 GKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209 G + TRL KL+ ++K I+LA AG+ R+ I ++L D + GQGA+ +E Sbjct: 61 GNLNTRLAKLDAADSKFSGIILAQAGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRA 120 Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST---------LY 260 N+ + +++ + +T + ER+FL L G C + +A ++ KG L Sbjct: 121 NDDQVLAMLQKLMCLNTTCRILAERSFLKTLGGGCSAPVAVWSNLKGEPLNGNSQEVGLS 180 Query: 261 FYGIVLASDGKI 272 G V + DG I Sbjct: 181 LTGAVWSLDGAI 192 >gi|317471679|ref|ZP_07931020.1| porphobilinogen deaminase [Anaerostipes sp. 3_2_56FAA] gi|316900783|gb|EFV22756.1| porphobilinogen deaminase [Anaerostipes sp. 3_2_56FAA] Length = 139 Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 55/135 (40%), Positives = 82/135 (60%), Gaps = 6/135 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVH-KIPPHNIVIIPLSTKGDRITNRTLTEIG 59 ME K RIG+R S LA+A +TR + + P + ++ L T GD+I N+TL +IG Sbjct: 1 MEPKRLRIGSRESLLAVA---QTRLVIEQLKANYPELSFELVTLKTTGDKILNKTLDKIG 57 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+++ L+ G ID AVHS KD+P ++ L ++A R D RDV + ++ + Sbjct: 58 GKGLFVKELDQALLDGRIDMAVHSMKDLPMEISDDLPVAAVPKRGDPRDVLVLPSSGDFE 117 Query: 120 DLALHSVIGTSSLRR 134 + VIG+SS RR Sbjct: 118 EFG--QVIGSSSARR 130 >gi|70933882|ref|XP_738249.1| porphobilinogen deaminase [Plasmodium chabaudi chabaudi] gi|56514312|emb|CAH88223.1| porphobilinogen deaminase, putative [Plasmodium chabaudi chabaudi] Length = 144 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 48/120 (40%), Positives = 73/120 (60%), Gaps = 2/120 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVII--PLSTKGDRITNRTLTEIGGK 61 K IGTR SPLA+ + + + L+ K NI +I P+ T GD+I ++T+ GGK Sbjct: 24 KEIIIGTRNSPLAIKQSEKVKKKLLTYFKKINQNINVILKPIKTTGDKILDKTVGSFGGK 83 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT+E++ +LI +D VHS KD+PT L + +S +L R+ I D F+S +SL D+ Sbjct: 84 GIFTKELDDELIKNNVDICVHSLKDIPTVLPDNIHLSCFLKRDTINDAFLSIKYKSLHDI 143 >gi|116332455|ref|YP_802172.1| bifunctional porphobilinogen deaminase/uroporphyrinogen synthase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116127322|gb|ABJ77414.1| Bifunctional porphobilinogen deaminase/uroporphyrinogen synthase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 542 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 81/301 (26%), Positives = 125/301 (41%), Gaps = 34/301 (11%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +I +R S LA + +L K P I + GD L ++G +G+FT Sbjct: 5 LKIASRKSALAKLQTYLVLDALK--KKFPNIQIELHFREASGDLDLQTPLWKMGTRGVFT 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +++ K L+ ++D +HS KD+ + G I L R D RDV + + K+ Sbjct: 63 QDLTKDLVEKKVDLVIHSWKDLDLEGHSGTTIVGVLDRADQRDVLLWKKSSLSKNFPSEL 122 Query: 126 VIGTSSLRRK---------ALLLRWR-SDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 I TSS RR+ +L R++ S + + RG I+TR+ K N+ + ++LA A Sbjct: 123 KIQTSSPRREYNLKKFLNNSLPSRYKNSSLIFLPVRGNIQTRIRKWGNSDSDGLVLAKAA 182 Query: 176 IKRLKKE--------------KVIKEILNIEDF--------PPSPGQGAICIETHVNNPK 213 + RL E K +KEIL F P +P QGAI E ++ Sbjct: 183 LDRLLSEDFLNSNELEYQEIRKFLKEILEESIFQVLPLSLSPSAPAQGAIAAEVRTDDEW 242 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 A V+ ++ + +V ER L G C I K Y L G+I Sbjct: 243 ALSFVRALSKPEVVSAVEEERNTLKRFGGGCHQKIGVSVLYKSYGKILYQKGLTDSGEIL 302 Query: 274 H 274 Sbjct: 303 E 303 >gi|266622116|ref|ZP_06115051.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Clostridium hathewayi DSM 13479] gi|288866179|gb|EFC98477.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Clostridium hathewayi DSM 13479] Length = 107 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/107 (49%), Positives = 62/107 (57%), Gaps = 2/107 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LA+ +L V P I+ T+GDRI N+ L E GGKG+ Sbjct: 3 KTIRIGTRKSALAMVQTELVAEALKQVQ--PGLETRIVTKVTEGDRILNKPLLEFGGKGV 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF 110 F E E+ L +GEID AVHSAKD+P L GL I A PRED RDV Sbjct: 61 FVTEFEQALQNGEIDFAVHSAKDLPMDLEDGLGIVAVPPREDPRDVL 107 >gi|300726136|ref|ZP_07059593.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Prevotella bryantii B14] gi|299776606|gb|EFI73159.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Prevotella bryantii B14] Length = 226 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 97/205 (47%), Gaps = 10/205 (4%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD-RITNRTLTEIGG 60 E P R+ R S L+ E + L D+ P+ IV T GD R+ L Sbjct: 6 ELAPIRVIARRSKLSQLQVAEVFNRLKDI----PYTIVFT--DTFGDKRLDLSLLNGEAP 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 +FT E++ L+ + D A+HSAKD+P L L++ A D D +S L D Sbjct: 60 DDMFTRELDWALLHDDADIAIHSAKDLPEHLHPDLEVIALYEAFDKTDALVSRDHIKLMD 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S +GTSS RK L R D+ ++ RG IE R+ ++ + K ++A +KRL Sbjct: 120 LPAGSTVGTSSPLRKKGLSELRPDLKIVGIRGCIEDRVAQVRDGKLDCAIVATCALKRLG 179 Query: 181 KEKVIKEILNIEDFPPSPGQGAICI 205 E I EIL FP P QG + I Sbjct: 180 MEDEITEILP---FPTHPMQGRLAI 201 >gi|116329566|ref|YP_799285.1| bifunctional porphobilinogen deaminase/uroporphyrinogen synthase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116122459|gb|ABJ80352.1| Bifunctional porphobilinogen deaminase/uroporphyrinogen synthase [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 542 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 81/301 (26%), Positives = 125/301 (41%), Gaps = 34/301 (11%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +I +R S LA + +L K P I + GD L ++G +G+FT Sbjct: 5 LKIASRKSALAKLQTYLVLDALK--KKFPNIQIELHFREASGDLDLQTPLWKMGTRGVFT 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +++ K L+ ++D +HS KD+ + G I L R D RDV + + K+ Sbjct: 63 QDLTKDLVEKKVDLVIHSWKDLDLEGHSGTTIVGVLDRADQRDVLLWKKSSLSKNFPSEL 122 Query: 126 VIGTSSLRRK---------ALLLRWR-SDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 I TSS RR+ +L R++ S + + RG I+TR+ K N+ + ++LA A Sbjct: 123 KIQTSSPRREYNLKKFLNNSLPSRYKNSSLIFLPVRGNIQTRIRKWRNSDSDGLVLAKAA 182 Query: 176 IKRLKKE--------------KVIKEILNIEDF--------PPSPGQGAICIETHVNNPK 213 + RL E K +KEIL F P +P QGAI E ++ Sbjct: 183 LDRLLSEDFLNSNELEYQEIRKFLKEILEESIFQVLPLSLSPSAPAQGAIAAEVRTDDEW 242 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 A V+ ++ + +V ER L G C I K Y L G+I Sbjct: 243 ALGFVRALSKPEVVSAVEEERNTLKRFGGGCHQKIGVSVLYKSYGKILYQKGLTDSGEIL 302 Query: 274 H 274 Sbjct: 303 E 303 >gi|46445906|ref|YP_007271.1| porphobilinogen deaminase [Candidatus Protochlamydia amoebophila UWE25] gi|46399547|emb|CAF22996.1| putative Porphobilinogen deaminase [Candidatus Protochlamydia amoebophila UWE25] Length = 233 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 11/223 (4%) Query: 4 KPFRI--GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +P+ I G R SPL+ A E +L + P I T GD +L ++ Sbjct: 14 QPYSISVGARSSPLSRAQVQEILKALRSFY--PSIEFTISYFDTIGDLDQKTSLRDLDKT 71 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 FT+EI++ ++ + +HSAKD+P + GLQ+ D DV + ++L+ L Sbjct: 72 NFFTKEIDEAILQKKCQIGIHSAKDLPDPIPDGLQLICLTKGVDCSDVLVLRDGETLQTL 131 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 HS I TSS+RR+ ++ R+D +D RG I RL L +A +++A A + RL Sbjct: 132 PPHSRIATSSIRRENIVKLLRNDFIFLDLRGTIHQRLALLEKKQADGVVVAEAALIRLGL 191 Query: 182 EKVIKEILNIEDFPPSP--GQGAICIETHVNNPKAQELVKVIN 222 LN P + GQG + I ++ K Q L ++ Sbjct: 192 TH-----LNRIRLPGTTVEGQGQLAIIARKDDAKMQTLFACLD 229 >gi|225016972|ref|ZP_03706164.1| hypothetical protein CLOSTMETH_00887 [Clostridium methylpentosum DSM 5476] gi|224950286|gb|EEG31495.1| hypothetical protein CLOSTMETH_00887 [Clostridium methylpentosum DSM 5476] Length = 292 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 5/235 (2%) Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 L +E+ LI +D AV+ A D+P +L L I A RED+RD + + D + Sbjct: 61 LVARRLEQALIDCRVDLAVYHALDLPLELHPELPIVAISSREDVRDALVFPQGKQQPDFS 120 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 IG +S R++ L R D G + +L +L+ + A++L A + + Sbjct: 121 --KPIGCTSRRQQVQLHRVFPDCITAPVGGTVAEQLARLDQGEYGALVLPAAQLGWFGLQ 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + ++ +E+ P+ G AI ++ L++ + D+WD+V CER F L+ Sbjct: 179 QRVGQLFCVEELVPAAGHAAIAVQAREEFDAG--LLECFHSWDSWDAVFCEREFARALEE 236 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 IA A KG TL G I+ S +G+R DA +G + A ++ Sbjct: 237 E-PGPIAVHAEVKGETLSVVGFYADEAEGIYRMSSMSGDRKDAGRLGFELAAELK 290 >gi|307254893|ref|ZP_07536715.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306862134|gb|EFM94106.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] Length = 174 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 52/152 (34%), Positives = 80/152 (52%) Query: 145 ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAIC 204 + V RG + TRL+KL+N + AI+LA AG+ RL + I+ +++E P+ GQGA+ Sbjct: 7 LEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMPERIRSFISVEQSLPAAGQGAVG 66 Query: 205 IETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGI 264 IET V++ + + +NH T V ERA L G C+ I GFA G+ + + Sbjct: 67 IETRVDDERVLNYLATLNHNPTACCVIAERAMNTRLQGGCQVPIGGFATLNGNEITLNAL 126 Query: 265 VLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 V A DG S +R +A +G A+ + Sbjct: 127 VGALDGSNIIRASGVADRENAEQLGISVAEQL 158 >gi|148693634|gb|EDL25581.1| mCG10727, isoform CRA_b [Mus musculus] Length = 208 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 101/216 (46%), Gaps = 29/216 (13%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT Sbjct: 21 IRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKSLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L E+D VHS KD+PT L G I A RE+ D + H K L Sbjct: 79 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLE--- 135 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKV 184 RG + TRL KL+ + AI+LA AG++R+ + Sbjct: 136 -----------------------TLRGNLNTRLRKLDELQEFSAIVLAVAGLQRMGWQNR 172 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220 + +IL+ E+ + GQ A+ +E + +LV V Sbjct: 173 VGQILHPEECMYAVGQVALAVEVRAKDQDILDLVSV 208 >gi|119587852|gb|EAW67448.1| hydroxymethylbilane synthase, isoform CRA_b [Homo sapiens] Length = 171 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 57/137 (41%), Positives = 76/137 (55%), Gaps = 5/137 (3%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 R+GTR S LA ++L + P II +ST GD+I + L++IG K LFT+ Sbjct: 22 RVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSLFTK 79 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLAL 123 E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ L Sbjct: 80 ELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLPE 139 Query: 124 HSVIGTSSLRRKALLLR 140 SV+GTSSLRR A L R Sbjct: 140 KSVVGTSSLRRAAQLQR 156 >gi|212550635|ref|YP_002308952.1| hydroxymethylbilane synthase/uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548873|dbj|BAG83541.1| hydroxymethylbilane synthase/uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 682 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 70/226 (30%), Positives = 106/226 (46%), Gaps = 20/226 (8%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDR-----------IT 51 K R+ +R SPL+L E S P + +I + + GD+ ++ Sbjct: 8 KGNLRVISRNSPLSLLQVKEVFSFF------PNIDYQLITIESFGDKNKHVALFDISNVS 61 Query: 52 NRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI 111 + L E FT E+++ LI + D AVHSAKD+P L L++ A D D I Sbjct: 62 SFFLEEESISDFFTRELDEALIYNKADIAVHSAKDLPYPLPYDLELFALFQAMDKSDSLI 121 Query: 112 SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILL 171 S +L+ L + +GTSS +RK LL+ R D+ V+ RG IE R+ K++N A+++ Sbjct: 122 SRNNLTLEQLPPRARVGTSSQKRKTELLKIRPDLEVVSIRGNIEERIAKMDNGFIDALIV 181 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217 A + RL E I IL F QG + I N+ + L Sbjct: 182 ATCALIRLGMEARIACIL---PFETHSLQGNLAIVGRKNDKNVKNL 224 >gi|297180918|gb|ADI17122.1| porphobilinogen deaminase [uncultured gamma proteobacterium HF0070_03O15] Length = 297 Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 87/265 (32%), Positives = 123/265 (46%), Gaps = 48/265 (18%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI-GGKGLF 64 +I TR S LAL + +S IP II + T+GD+ + + E+ K F Sbjct: 1 MKIATRSSKLALEQTYFFQSW------IPKQPTKIIEIKTEGDKKS--AMGEVLFDKANF 52 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPR---------EDIRDVFISHTA 115 +IE+ LI D A+HSAKDMP K L + PR +DI VF Sbjct: 53 VSDIEECLIKDGADVAIHSAKDMPAFKHKELDHYFFGPRSRSDLLIFRKDIDPVF----- 107 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 KD+ L GTSSLRRK + +V+ G ++TR+NKLN+ I+LA AG Sbjct: 108 --KKDMKL----GTSSLRRKMQAKFYLGAKNVVPISGNVDTRINKLNSGDYDCIILAEAG 161 Query: 176 IKRLKKEKVIKEILNIEDFP--PSPGQGAICIETHVNNPKAQE---------LVKVINHE 224 +RL K+ E LN + GQG + ++ +N A+E L +VI+ Sbjct: 162 CQRL---KIDFEDLNYIELGHLTCAGQGVLAVQYKRDNKFAKEFLLEWKQNFLQRVIH-- 216 Query: 225 DTWDSVNCERAFLAELDGSCKSAIA 249 D E+ L ++ SC SAIA Sbjct: 217 ---DETEMEKRLLEKIGASCNSAIA 238 >gi|297181506|gb|ADI17693.1| porphobilinogen deaminase [uncultured gamma proteobacterium HF0130_23I23] Length = 297 Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 101/322 (31%), Positives = 143/322 (44%), Gaps = 58/322 (18%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI-GGKGLF 64 +I TR S LAL + +S IP II + T+GD+ + + E+ K F Sbjct: 1 MKIATRSSKLALEQTYFFQSW------IPKQPTKIIEIKTEGDKKS--AMGEVLFDKANF 52 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPR---------EDIRDVFISHTA 115 +IE+ LI D A+HSAKDMP K L + PR +DI VF Sbjct: 53 VSDIEECLIKDGADVAIHSAKDMPAFKHKELDHYFFGPRSRSDLLIFRKDIDPVF----- 107 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 KD+ L GTSSLRRK + +V+ G ++TR+NKLN+ I+LA AG Sbjct: 108 --KKDMKL----GTSSLRRKMQAKFYLGAKNVVPISGNVDTRINKLNSGDYDCIILAEAG 161 Query: 176 IKRLKKEKVIKEILNIEDFP--PSPGQGAICIETHVNNPKAQE---------LVKVINHE 224 +RL K+ E LN + GQG + ++ +N A+E L +VI+ Sbjct: 162 CQRL---KIDFEDLNYIELGHLTCAGQGVLAVQYKRDNKFAKEFLLEWKQNFLQRVIH-- 216 Query: 225 DTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGN 281 D E+ L ++ SC SAIA A +G G+ G+I+ +S G Sbjct: 217 ---DETEMEKRLLEKIGASCNSAIAVRANHEGPK----GVDKIIKGEIYGLNEYISFEGK 269 Query: 282 RCDAINIGRDAAQYIRFISNKN 303 D DA I + NKN Sbjct: 270 SSDVDTAINDA---IDMLQNKN 288 >gi|209732910|gb|ACI67324.1| Porphobilinogen deaminase [Salmo salar] Length = 174 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 58/136 (42%), Positives = 74/136 (54%), Gaps = 5/136 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA L ++ P ++ I+ +ST GD+I + L++IG K LFT Sbjct: 20 IRMGTRKSQLARIQTDYVAEKLKTLY--PDVHLEIVAMSTIGDKILDTALSKIGEKSLFT 77 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS---LKDLA 122 +E+E L E+D VHS KD+PT L G I A L RE D + H S L L Sbjct: 78 KELENALERNEVDLVVHSLKDLPTTLPNGFTIGAVLQRESPHDAVVLHPKNSGLTLDTLP 137 Query: 123 LHSVIGTSSLRRKALL 138 SVIGTSSLRR A L Sbjct: 138 DGSVIGTSSLRRAAQL 153 >gi|297620494|ref|YP_003708631.1| Porphobilinogen deaminase/Uroporphyrinogen-III synthase [Waddlia chondrophila WSU 86-1044] gi|297375795|gb|ADI37625.1| Porphobilinogen deaminase/Uroporphyrinogen-III synthase [Waddlia chondrophila WSU 86-1044] Length = 472 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 7/199 (3%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 + R SPL+ A E L + I P + ++T GDR +L + FT Sbjct: 61 VAARSSPLSEAQVDEI---LYEAQLIQPTLEFEVTLVTTLGDRDQESSLRTLEKTDFFTR 117 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 +I++ L++G AVHSAKD+P + GL I A D D + +L L + Sbjct: 118 DIDQLLLNGYCRIAVHSAKDLPDPIPNGLNIIAVNQGLDPSDSLVMRPGDTLSSLPKGAK 177 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 I TSS+RR+ + RSD+ V+D RG I RL KLN+ + +++A + + RL + + Sbjct: 178 IATSSIRREKAVHSLRSDLEVVDIRGNIGQRLQKLNDREVDGVIVAESALIRLNLYHLNR 237 Query: 187 EILNIEDFPPSPGQGAICI 205 L E +PGQG + + Sbjct: 238 IHLPGET---APGQGKLAV 253 >gi|222480661|ref|YP_002566898.1| porphobilinogen deaminase [Halorubrum lacusprofundi ATCC 49239] gi|222453563|gb|ACM57828.1| porphobilinogen deaminase [Halorubrum lacusprofundi ATCC 49239] Length = 385 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/156 (32%), Positives = 84/156 (53%), Gaps = 4/156 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+ TR S LAL A R +L + ++ + + T+GD+I + + +G G F Sbjct: 5 LRLATRGSDLALRQAGTVRDALSSRRR----DVELRRVETRGDQIPDEMIHRLGKTGAFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++++++ G+ D AVHS KD+PT+ + + I+ R DV + ++DL S Sbjct: 61 RALDEEVLGGDADLAVHSLKDVPTEGMDDMVIAGVPERAPSGDVLVHPDGLGIEDLPSGS 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 V+GT SLRR A + R D+ V RG ++TR+ KL Sbjct: 121 VVGTGSLRRTAQIKAARPDLVVEPLRGNVDTRVEKL 156 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 12/130 (9%) Query: 143 SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-EKVIKEILNIEDFPPSPGQG 201 SD+ K+ET + AI+LA AG++R + +V L E+F P+ GQG Sbjct: 214 SDLERSAMERKVETEYD--------AIVLAEAGLRRSELFYEVPTTRLPREEFVPAAGQG 265 Query: 202 AICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY 260 AI + +P E V+ ++H T +V ER L EL+G C + I A +G ++ Sbjct: 266 AIAV--TATDPDVIEDVRSAVDHPRTRVAVTVERTILGELNGGCVAPIGVSALVQGEHVH 323 Query: 261 FYGIVLASDG 270 VL++DG Sbjct: 324 TRVRVLSTDG 333 >gi|325118217|emb|CBZ53768.1| putative porphobilinogen deaminase [Neospora caninum Liverpool] Length = 683 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 38/75 (50%), Positives = 54/75 (72%) Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96 + I+PL T GD + L ++GGKGLFT+E++ L++G++D VHS KD+PT+L G + Sbjct: 239 ELCIVPLQTTGDSALHLPLAQLGGKGLFTKELDVALLAGQVDVVVHSMKDVPTELPPGTE 298 Query: 97 ISAYLPREDIRDVFI 111 I A+LPRED RD FI Sbjct: 299 IGAFLPREDPRDAFI 313 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 30/163 (18%) Query: 126 VIGTSSLRRKALL--LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK--- 180 + GT SLRR+ALL L ++ RG ++TR+ ++ K A LLA AG+KRL Sbjct: 411 IFGTCSLRRQALLHALLPPGSFHLMGLRGNVQTRMRRIEEGKLDATLLAAAGLKRLCLLP 470 Query: 181 -------------------------KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215 + V +L E F P+ QG + ++ + + Sbjct: 471 SLLSPSRDSGPLASPLGCVSTHARGRACVEAVLLPAEVFVPAVCQGVVGVQCRSADTRIL 530 Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST 258 L+ +N + CERAFL LDGSC++ IAG A +G T Sbjct: 531 SLLHSLNSLSSRGQARCERAFLRALDGSCRTPIAGIAQWRGVT 573 >gi|15835189|ref|NP_296948.1| porphobilinogen deaminase [Chlamydia muridarum Nigg] gi|270285361|ref|ZP_06194755.1| porphobilinogen deaminase [Chlamydia muridarum Nigg] gi|270289377|ref|ZP_06195679.1| porphobilinogen deaminase [Chlamydia muridarum Weiss] gi|301336758|ref|ZP_07224960.1| porphobilinogen deaminase [Chlamydia muridarum MopnTet14] gi|11386847|sp|Q9PK95|HEM3_CHLMU RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|7190611|gb|AAF39408.1| porphobilinogen deaminase HemC, putative [Chlamydia muridarum Nigg] Length = 242 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 99/208 (47%), Gaps = 9/208 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 + K P R+ +R SPLA+ A E L P +I +T+GD + L + Sbjct: 16 LGKIPLRLASRKSPLAVLQAHECLRRLQTF--FPRLWGQVITETTQGDLDQHTPLHSVEN 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G FT++I+ + SG+ D A+HSAKD+P K ++ A D RD+ + L+ Sbjct: 74 TGFFTDDIDFLVQSGKCDLAIHSAKDLPEK--PKARVIAITASIDPRDILVFQEKYLLQP 131 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 IG SS RR+AL+ + D RG I+TRL L+ K AI++A A + RL Sbjct: 132 FPSRLRIGCSSDRRRALISSLYPSAVITDIRGTIQTRLALLDQQKFDAIVMANAAVSRLG 191 Query: 181 KEKVIKEILNIEDFPP-SPGQGAICIET 207 +L PP P QG + I + Sbjct: 192 LRLPCTVVLP----PPYHPFQGRLAITS 215 >gi|237833021|ref|XP_002365808.1| porphobilinogen deaminase, putative [Toxoplasma gondii ME49] gi|211963472|gb|EEA98667.1| porphobilinogen deaminase, putative [Toxoplasma gondii ME49] Length = 729 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 37/75 (49%), Positives = 54/75 (72%) Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96 + I+P+ T GD+ + L ++GGKGLFT+E++ L+ G++D VHS KD+PT+L +G + Sbjct: 265 ELRIVPMQTTGDKELHLPLAQVGGKGLFTKELDLALLHGQVDVVVHSLKDVPTELPEGTE 324 Query: 97 ISAYLPREDIRDVFI 111 I AYLPRED RD I Sbjct: 325 IGAYLPREDPRDALI 339 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 42/188 (22%) Query: 127 IGTSSLRRKALL--LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL----- 179 IGT SLRR+ALL L S ++ RG ++TR++++ A LLA AG+KRL Sbjct: 442 IGTCSLRRQALLYALLPPSSFQLMGLRGNVQTRMSRIEKGTLDATLLAAAGLKRLNLLSA 501 Query: 180 -------------------------KKEKVIKEILNIED-FPPSPGQGAICIETHVNNPK 213 + ++ +L D F P+ QG I ++ + Sbjct: 502 MLAPSPSATPSPCPASSPNEASRGTEPGGCVEAVLLPADVFVPAVCQGIIGVQCRSADTG 561 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 L++ +N + CERAFL LDGSC++ IAG A + + + G+ Sbjct: 562 ILSLLRELNSPSSRGQALCERAFLRALDGSCRTPIAGIAEWR---------AVPAQGEAP 612 Query: 274 HEVSRNGN 281 S+NG+ Sbjct: 613 RPQSQNGS 620 >gi|147899551|ref|NP_001088263.1| hydroxymethylbilane synthase [Xenopus laevis] gi|54038668|gb|AAH84265.1| LOC495094 protein [Xenopus laevis] Length = 256 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 81/161 (50%), Gaps = 1/161 (0%) Query: 111 ISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAI 169 + + +L L SVIGTSSLRR A L + + D RG + TRL KL+ + AI Sbjct: 22 LKKSGNTLSTLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRLKKLDEQEDFSAI 81 Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 +LA AG++R+ E I +IL ++ + GQGA+ +E + +V + +T Sbjct: 82 VLAAAGLRRMGWENRIGQILTSDECLYAVGQGALAVEVRTKDQDILSMVSALQDPETVLR 141 Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG 270 ERAF+ L+G C +A K LY G V + DG Sbjct: 142 CVAERAFMKRLEGGCSVPVAVSTVVKDLQLYLTGAVYSLDG 182 >gi|70780272|gb|AAZ08387.1| porphobilinogen deaminase [Toxoplasma gondii] Length = 747 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 37/75 (49%), Positives = 54/75 (72%) Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96 + I+P+ T GD+ + L ++GGKGLFT+E++ L+ G++D VHS KD+PT+L +G + Sbjct: 268 ELRIVPMQTTGDKELHLPLAQVGGKGLFTKELDLALLHGQVDVVVHSLKDVPTELPEGTE 327 Query: 97 ISAYLPREDIRDVFI 111 I AYLPRED RD I Sbjct: 328 IGAYLPREDPRDALI 342 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 42/188 (22%) Query: 127 IGTSSLRRKALL--LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL----- 179 IGT SLRR+ALL L S ++ RG ++TR++++ A LLA AG+KRL Sbjct: 445 IGTCSLRRQALLYALLPPSSFQLMGLRGNVQTRMSRIEKGTLDATLLAAAGLKRLNLLSA 504 Query: 180 -------------------------KKEKVIKEILNIED-FPPSPGQGAICIETHVNNPK 213 + ++ +L D F P+ QG I ++ + Sbjct: 505 MLAPSPSATPSPCPAPSPNETSRGTEPGGCVEAVLLPADVFVPAVCQGIIGVQCRSADTG 564 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 L++ +N + CERAFL LDGSC++ IAG A + + + G+ Sbjct: 565 ILSLLRELNSPSSRGQALCERAFLRALDGSCRTPIAGIAEWR---------AVPAQGEAP 615 Query: 274 HEVSRNGN 281 S+NG+ Sbjct: 616 RPQSQNGS 623 >gi|262277145|ref|ZP_06054938.1| Putative porphobilinogen deaminase (pbg)(hydroxymethylbilane synthase) (hmbs) (pre-uroporphyrinogen synthase) [alpha proteobacterium HIMB114] gi|262224248|gb|EEY74707.1| Putative porphobilinogen deaminase (pbg)(hydroxymethylbilane synthase) (hmbs) (pre-uroporphyrinogen synthase) [alpha proteobacterium HIMB114] Length = 492 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 88/291 (30%), Positives = 126/291 (43%), Gaps = 31/291 (10%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG+R S LA F + L K STKGD+ + G G+FT Sbjct: 7 IGSRASFLAKIQTFIVKQELKKKIKNIKITTKY--HSTKGDKNQGHMPWKNLGYGIFTTS 64 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 + +LI+ +C VHS KD+P +LK + R+D RDV + ++ Sbjct: 65 LTNELINKNFNCVVHSYKDLP--VLKSKTDYYVITRDDPRDV---LLVKKKCLNKKKFIV 119 Query: 128 GTSSLRRKALL-----LRWRSDISVIDFRGKIETRLNK-LNNNKAHAILLAYAGIKRL-- 179 GTSS RRK+ + L DI RG + TRL K ++ N+ A+ +A A I R+ Sbjct: 120 GTSSPRRKSSVKDLKDLTGIKDIKTKTIRGNVTTRLLKVISKNQYDAVFMAKAAIDRIFK 179 Query: 180 ---KKEKV-IKEILNI-----------EDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224 K +KV K+ LN+ FP + QGAI +E N+ K + + IN + Sbjct: 180 YGNKVDKVETKKFLNLFKKFKPFILPLSIFPTAASQGAIAVEYLKNDKKTKSTLNKINCK 239 Query: 225 DTWDSVNCERAFLAELDGSCKSAIA-GFAYCKGSTLYFYGIVLASDGKIFH 274 T N ER+ L + G C I K + F V A + K FH Sbjct: 240 KTLSICNQERSLLKKYGGGCGLDIGITIEEIKNNNFLFSKGVDARNKKEFH 290 >gi|258567590|ref|XP_002584539.1| porphobilinogen deaminase [Uncinocarpus reesii 1704] gi|237905985|gb|EEP80386.1| porphobilinogen deaminase [Uncinocarpus reesii 1704] Length = 287 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 75/292 (25%), Positives = 124/292 (42%), Gaps = 57/292 (19%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+K + IGTR SPLAL Sbjct: 5 ERKTYTIGTRKSPLALVQ------------------------------------------ 22 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 T+ + + L + +C + +PT++ + A +PRE+ RDV + +L Sbjct: 23 ---TDLVRRALQTAYPNCDLKVHGHVPTQIPDACVLGAMMPRENPRDVLVIKKGLPWMTL 79 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGI 176 +L SV+GTSS+RR A L R + V D RG I+TRL KL+ +++A AG+ Sbjct: 80 AELPAGSVVGTSSVRRTAQLARHYPHLVVQDIRGNIDTRLAKLDAEDGPFTCLIMAAAGL 139 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R E + + L+ ++ + GQGA+ IE ++ +++V I T + ER Sbjct: 140 LRTGHENRVTQYLDSKNGKMLHAVGQGALGIEVRTDDEVMKDMVNKIGDMPTTYACMAER 199 Query: 235 AFLAELDGSCKSAIAGFAYC-----KGSTLYFYGIVLASDGKIFHEVSRNGN 281 L ++G C + + S L IV++ DGK E+ ++G+ Sbjct: 200 NLLRTVEGGCSAPLGVETEWIQDDNGKSLLRLRAIVVSVDGKEAVELEKDGD 251 >gi|260829671|ref|XP_002609785.1| hypothetical protein BRAFLDRAFT_280323 [Branchiostoma floridae] gi|229295147|gb|EEN65795.1| hypothetical protein BRAFLDRAFT_280323 [Branchiostoma floridae] Length = 140 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 49/104 (47%), Positives = 64/104 (61%), Gaps = 3/104 (2%) Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99 II +ST GD+I + L++IG K LFT+E+EK L G +D VHS KD+ + L + I A Sbjct: 22 IISMSTTGDKILDTALSKIGEKSLFTKELEKALDDGRVDFVVHSLKDLQSTLPPNMVIGA 81 Query: 100 YLPREDIRDVFI---SHTAQSLKDLALHSVIGTSSLRRKALLLR 140 L RED D + H + L DL +SVIGTSS+RR A L R Sbjct: 82 VLEREDPYDAVLMHPKHATKCLADLPENSVIGTSSVRRVAQLKR 125 >gi|297170259|gb|ADI21296.1| porphobilinogen deaminase [uncultured gamma proteobacterium HF0010_09F21] Length = 282 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 70/237 (29%), Positives = 115/237 (48%), Gaps = 32/237 (13%) Query: 30 VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPT 89 + +I + VI + TKGD+ + + T+ K F ++IE+K+ SG+ID AVHSAKD+P Sbjct: 1 MEEIGIEDYVIEKIVTKGDKESAKGRTQFD-KLNFVQDIEEKISSGDIDIAVHSAKDLPA 59 Query: 90 KLLKGLQISAYLPREDIRDVF------ISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS 143 K + + RE D+ I ++ K + ++GTSSLRRK Sbjct: 60 TESK--EFDYFYLRESTEDISTWSSDRIIFRDKNKKKFSSEMILGTSSLRRKMQAKFLLG 117 Query: 144 DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE----DFPPSPG 199 + G I+TR+ KLN+ + I+LA AG RL N+ DF Sbjct: 118 AEKIFSLNGNIDTRIRKLNSGEYDCIILANAGCTRLG--------FNLNSYNLDFLTPSA 169 Query: 200 QGAICIETHVNNPKAQELVKVINH---EDTWD----SVNCERAFLAELDGSCKSAIA 249 QG IC++ K ++ K++N+ +D + ++ ++FL ++ C SAI+ Sbjct: 170 QGLICLQC----LKGTDISKMLNNFFDKDKYKIHKLGMDIYKSFLRNINADCNSAIS 222 >gi|3172401|gb|AAC18584.1| porphobilinogen deaminase [Lysinibacillus sphaericus] Length = 109 Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 48/105 (45%), Positives = 61/105 (58%), Gaps = 2/105 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G+R S LAL + L P + + TKGD+I + L+++GGKGLF +E Sbjct: 7 VGSRRSKLALTQTNWFINELKAAGV--PFEFEVKEIVTKGDQILDVQLSKVGGKGLFVKE 64 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS 112 IE+ L EID AVHS KDMP L +GL I PRED RD FIS Sbjct: 65 IEQALFDKEIDFAVHSMKDMPAVLPEGLVIGCIPPREDARDAFIS 109 >gi|42524803|ref|NP_970183.1| hydroxymethylbilane synthase [Bdellovibrio bacteriovorus HD100] gi|39577013|emb|CAE78242.1| hydroxymethylbilane synthase [Bdellovibrio bacteriovorus HD100] Length = 502 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 77/278 (27%), Positives = 125/278 (44%), Gaps = 43/278 (15%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI R S LA A+ +L + K P I + GD+ L +I KG+FT Sbjct: 3 LRISARKSDLARLQAYMVGDALKE--KNPQIEIDYRFRESLGDKNLTDPLWKIPEKGVFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SH-----TAQS 117 E+ +L+ E D VHS KD+PT+ I+A LPR D RD+ + SH T+++ Sbjct: 61 EDFFGELLRDETDLVVHSWKDLPTEHKSETVIAATLPRADQRDLLLVKKSHFDKIKTSKT 120 Query: 118 LKDLALHSVIGTSSLRRKALLLRW--------RSDISVIDFRGKIETRLNKL-NNNKAHA 168 LK + +SS RR+ L + D+ RG + TR+ KL + + Sbjct: 121 LK-------VFSSSPRREYNLTGFFKEHLPFGLQDVKFESVRGNMLTRVRKLIESPETDG 173 Query: 169 ILLAYAGIKR---------LKKEKVIKEILNIEDF--------PPSPGQGAICIETHVNN 211 +++A A R L+ ++ +++ N ++ P + QGA+ +E + Sbjct: 174 LIVAKAAFDRLFSATLPEFLEGQQQLRQYFNELNWVVLPLSVNPNAAAQGALAVEVLKSR 233 Query: 212 PKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 Q+L++ I+H DT+ ER L+ G C I Sbjct: 234 QDLQDLLQSIHHADTFHCSQKERDVLSSFGGGCHQKIG 271 >gi|255348660|ref|ZP_05380667.1| porphobilinogen deaminase [Chlamydia trachomatis 70] gi|255503200|ref|ZP_05381590.1| porphobilinogen deaminase [Chlamydia trachomatis 70s] gi|296434889|gb|ADH17067.1| porphobilinogen deaminase [Chlamydia trachomatis E/150] gi|296438609|gb|ADH20762.1| porphobilinogen deaminase [Chlamydia trachomatis E/11023] Length = 241 Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 96/208 (46%), Gaps = 7/208 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+ +R S LA+ A E L P II +T+GD L + G F Sbjct: 20 PLRLASRQSSLAVLQAHECLRKLQIF--FPRLWGQIITTTTQGDLDQETPLCAVENTGFF 77 Query: 65 TEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 T++++ + SG+ D +HSAKD+P + I+A + D RD+ + H L Sbjct: 78 TDDVDFLVQSGQCDLGIHSAKDLPENPKATVISITASI---DPRDILVFHEKYLSIPLPR 134 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 IG+SS+RRK LL + D RG I+TRL L AI++A A + RL Sbjct: 135 RLRIGSSSVRRKELLSLLYPSAIITDIRGTIQTRLKLLEEKNFDAIVMANAAVSRLGLRL 194 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNN 211 +IL + P G+ AI H+ + Sbjct: 195 PCTKILP-PPYHPLQGRLAITASRHIRS 221 >gi|45655592|ref|YP_003401.1| porphobilinogen deaminase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45602563|gb|AAS72038.1| porphobilinogen deaminase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 547 Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 71/293 (24%), Positives = 120/293 (40%), Gaps = 36/293 (12%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IG+R S LA + +L K P + + GD+ L ++G KG+FT Sbjct: 10 LKIGSRKSALAKLQTYLVLGALK--KKFPEIQVELFFREASGDQDLQTPLWKMGTKGVFT 67 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +++ L+ ++D +HS KD+ + I L R D RDV + + K Sbjct: 68 QDLTADLVEKKVDIVIHSWKDLDLEGHPDTTIIGVLDRADQRDVLLWKKSSLSKYSPSVL 127 Query: 126 VIGTSSLRRKALLLRW----------RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 I TSS RR+ L ++ S + + RG I+TR+ K + + ++LA A Sbjct: 128 KIHTSSPRREYNLRKFLSFSLPSRYTNSSLVFLPIRGNIQTRIRKWKESDSDGLVLAKAA 187 Query: 176 IKRLKKE----------------------KVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + RL E + + +I + P +PGQGAI E + Sbjct: 188 LDRLLSEDFFNSDELEYQEIRKFLKDSMDESVYQIFPLSLNPTAPGQGAIAAEVRTEDNW 247 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSC--KSAIAGFAYCKGSTLYFYGI 264 + ++ ++ + +V ER L G C K ++ G LY G+ Sbjct: 248 VLDRIRTLSKSEVVLAVEEERKILKRFGGGCHQKIGVSILQKAYGKILYQRGL 300 >gi|294653592|ref|NP_714555.2| porphobilinogen deaminase [Leptospira interrogans serovar Lai str. 56601] gi|293630693|gb|AAN51570.2| porphobilinogen deaminase [Leptospira interrogans serovar Lai str. 56601] Length = 542 Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 71/293 (24%), Positives = 120/293 (40%), Gaps = 36/293 (12%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IG+R S LA + +L K P + + GD+ L ++G KG+FT Sbjct: 5 LKIGSRKSALAKLQTYLVLGALK--KKFPEIQVELFFREASGDQDLQTPLWKMGTKGVFT 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +++ L+ ++D +HS KD+ + I L R D RDV + + K Sbjct: 63 QDLTADLVEKKVDIVIHSWKDLDLEGHPDTTIIGVLDRADQRDVLLWKKSSLSKYSPSVL 122 Query: 126 VIGTSSLRRKALLLRW----------RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 I TSS RR+ L ++ S + + RG I+TR+ K + + ++LA A Sbjct: 123 KIHTSSPRREYNLRKFLSFSLPSRYTNSSLVFLPIRGNIQTRIRKWKESDSDGLVLAKAA 182 Query: 176 IKRLKKE----------------------KVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + RL E + + +I + P +PGQGAI E + Sbjct: 183 LDRLLSEDFFNSDELEYQEIRKFLKDSMDESVYQIFPLSLNPTAPGQGAIAAEVRTEDNW 242 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSC--KSAIAGFAYCKGSTLYFYGI 264 + ++ ++ + +V ER L G C K ++ G LY G+ Sbjct: 243 VLDRIRTLSKSEVVLAVEEERKILKRFGGGCHQKIGVSILQKAYGKILYQRGL 295 >gi|15605020|ref|NP_219804.1| porphobilinogen deaminase [Chlamydia trachomatis D/UW-3/CX] gi|76789021|ref|YP_328107.1| porphobilinogen deaminase [Chlamydia trachomatis A/HAR-13] gi|255311101|ref|ZP_05353671.1| porphobilinogen deaminase [Chlamydia trachomatis 6276] gi|255317402|ref|ZP_05358648.1| porphobilinogen deaminase [Chlamydia trachomatis 6276s] gi|255506878|ref|ZP_05382517.1| porphobilinogen deaminase [Chlamydia trachomatis D(s)2923] gi|301335770|ref|ZP_07224014.1| porphobilinogen deaminase [Chlamydia trachomatis L2tet1] gi|11386778|sp|O84301|HEM3_CHLTR RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|3328714|gb|AAC67892.1| Porphobilinogen Deaminase [Chlamydia trachomatis D/UW-3/CX] gi|76167551|gb|AAX50559.1| porphobilinogen deaminase [Chlamydia trachomatis A/HAR-13] gi|296435816|gb|ADH17990.1| porphobilinogen deaminase [Chlamydia trachomatis G/9768] gi|296436741|gb|ADH18911.1| porphobilinogen deaminase [Chlamydia trachomatis G/11222] gi|296437676|gb|ADH19837.1| porphobilinogen deaminase [Chlamydia trachomatis G/11074] gi|297140175|gb|ADH96933.1| porphobilinogen deaminase [Chlamydia trachomatis G/9301] gi|297748428|gb|ADI50974.1| Porphobilinogen deaminase [Chlamydia trachomatis D-EC] gi|297749308|gb|ADI51986.1| Porphobilinogen deaminase [Chlamydia trachomatis D-LC] Length = 241 Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 5/207 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+ +R S LA+ A E L P II +T+GD L + G F Sbjct: 20 PLRLASRQSSLAVLQAHECLRKLQIF--FPRLWGQIITTTTQGDLDQETPLCAVENTGFF 77 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T++++ + SG+ D +HSAKD+P + + D RD+ + H L Sbjct: 78 TDDVDFLVQSGQCDLGIHSAKDLPEN--PKATVVSITASIDPRDILVFHEKYLSIPLPRR 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IG+SS+RRK LL + D RG I+TRL L AI++A A + RL Sbjct: 136 LRIGSSSVRRKELLSLLYPSAIITDIRGTIQTRLKLLEEKNFDAIVMANAAVSRLGLRLP 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNN 211 +IL + P G+ AI H+ + Sbjct: 196 CTKILP-PPYHPLQGRLAITASRHIRS 221 >gi|89898473|ref|YP_515583.1| porphobilinogen deaminase [Chlamydophila felis Fe/C-56] gi|89331845|dbj|BAE81438.1| porphobilinogen deaminase [Chlamydophila felis Fe/C-56] Length = 243 Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 11/227 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 + ++P RI +R S LA A +E L P I I ++T+GD+ L I Sbjct: 16 LGRRPLRIASRKSTLAKAQVYECVRLLRSW--FPKLWIQIQTVNTQGDKDKTTPLRLIEN 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 FT+ ++K ++SG AVHSAKD+P + I A D D+ + K Sbjct: 74 SQFFTDAVDKLVLSGNSHLAVHSAKDLPNPPVT--TIIAITQGLDPADLLVYGNRYLWKR 131 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +G+SSLRR+ +L + ++ RG IE RL +L + K AI++A A RL Sbjct: 132 FPKNPKLGSSSLRREEILKKLFPAGKILHIRGTIEERLEQLESGKYDAIIVAKAAALRLH 191 Query: 181 KEKVIKEILNIEDFPPS--PGQGAICIETHVNNPKAQELVKVINHED 225 ++ E+ PP P QG + + N ++L+ +N D Sbjct: 192 -----LKLPYTEELPPPYHPLQGRLSVTAAKNIESWKKLLYPLNTSD 233 >gi|294919063|ref|XP_002778511.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983] gi|239886970|gb|EER10306.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983] Length = 553 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 41/281 (14%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LA L ++ + + GD L ++ G+FT Sbjct: 9 LRIGSRRSDLARLQTLMVADRLEEMG----YKVECEYQEAPGDTNLKDPLWKMPETGVFT 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + +KL+ G +D VHS KD+P G ++A LPR D RD+ I + A++ Sbjct: 65 TFLRQKLLDGSVDLVVHSWKDLPLAEEAGTTVAATLPRADPRDLIIIRKDAEAEIRAMNG 124 Query: 126 --VIGTSSLRRK----ALLLRWRSDISVIDF---RGKIETRLNKLNN---------NKAH 167 ++ +SS RR+ A L R + ++F RG I+TR+ KL + + H Sbjct: 125 KLIVLSSSPRRQWNLPAFLQRAVPGVETVEFRDVRGNIQTRMRKLMDPARHDASLGPRPH 184 Query: 168 AILLAYAGIKRLKK-----------------EKVIKEILNIEDFPPSPGQGAICIETHVN 210 A++LA A + R + K +L + P + QGA+ +E Sbjct: 185 ALVLAKAAVDRFAQSHRGEFRNSRELVQGYLSKCHCMVLPLSANPTAAAQGALGVEVSTA 244 Query: 211 NPKA--QELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 + K +++V +N E T+ + E+ L G C I Sbjct: 245 SEKGHVRKIVSKLNDEQTFQAAWREKEVLGAYGGGCHQRIG 285 >gi|62319114|dbj|BAD94270.1| hydroxymethylbilane synthase [Arabidopsis thaliana] Length = 130 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 3/115 (2%) Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + IL++++ P+ QGAI I ++ K + +NHE+T +++CERAFL LDGSC Sbjct: 5 VASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDGSC 64 Query: 245 KSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYI 296 ++ IAG+A + F G+V + DG E SR G D + +G+DA Q + Sbjct: 65 RTPIAGYASKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQEL 119 >gi|329942690|ref|ZP_08291469.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Chlamydophila psittaci Cal10] gi|332287285|ref|YP_004422186.1| porphobilinogen deaminase [Chlamydophila psittaci 6BC] gi|313847869|emb|CBY16864.1| putative porphobilinogen deaminase [Chlamydophila psittaci RD1] gi|325506761|gb|ADZ18399.1| porphobilinogen deaminase [Chlamydophila psittaci 6BC] gi|328814950|gb|EGF84939.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Chlamydophila psittaci Cal10] gi|328914531|gb|AEB55364.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Chlamydophila psittaci 6BC] Length = 245 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 66/206 (32%), Positives = 93/206 (45%), Gaps = 9/206 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 + ++P RI +R S LA A E L P I I +ST+GD+ L + Sbjct: 16 LGRRPLRIASRKSTLAQAQVHECVRLLRSW--FPKLWIQIHTISTRGDKDKTTPLRLVEN 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 FT+ ++K +I G AVHSAKD+P + A D D+ + K Sbjct: 74 SQFFTDAVDKLVIRGNCHLAVHSAKDLPDP--PATPVVAITKGLDPSDLLVYAERYLWKR 131 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 +G+SSLRR L + ++D RG IE RL +L N K AI++A A I RL Sbjct: 132 FPKVPRLGSSSLRRGETLKTLFPEGRILDIRGTIEERLEQLENGKYDAIVIAKAAILRLH 191 Query: 181 KEKVIKEILNIEDFPP-SPGQGAICI 205 ++L PP P QG + I Sbjct: 192 LHLPYTKVLP----PPYHPLQGRLAI 213 >gi|294953467|ref|XP_002787778.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983] gi|239902802|gb|EER19574.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983] Length = 553 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 41/281 (14%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LA L ++ + + GD L ++ G+FT Sbjct: 9 LRIGSRRSDLARLQTLMVADRLEEMG----YEVECEYQEAPGDTNLKDPLWKMPETGVFT 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + +KL+ G +D VHS KD+P G ++A LPR D RD+ I + A++ Sbjct: 65 TFLRQKLLEGSVDLVVHSWKDLPLAEEAGTTVAATLPRADPRDLIIIRKDAEAEIRAMNG 124 Query: 126 --VIGTSSLRRK----ALLLRWRSDISVIDF---RGKIETRLNKLNN---------NKAH 167 ++ +SS RR+ A L R + ++F RG I+TR+ KL + + H Sbjct: 125 KLIVLSSSPRRQWNLPAFLQRAVPGVETVEFRDVRGNIQTRMRKLMDPARHNASLGPRPH 184 Query: 168 AILLAYAGIKRLKK-----------------EKVIKEILNIEDFPPSPGQGAICIETHVN 210 A++LA A + R + K +L + P + QGA+ +E Sbjct: 185 ALVLAKAAVDRFAQSHREEFRNSRELVEGYLSKCHCMVLPLSANPTAAAQGALGVEVSTA 244 Query: 211 NPK--AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 + K +++V +N E T+ + E+ L G C I Sbjct: 245 SEKEHVRKIVSKLNDEQTFQAAWREKEVLGAYGGGCHQRIG 285 >gi|269302924|gb|ACZ33024.1| porphobilinogen deaminase [Chlamydophila pneumoniae LPCoLN] Length = 234 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 71/222 (31%), Positives = 105/222 (47%), Gaps = 11/222 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+P RI +R S LA A E S L + P + T GDR L + Sbjct: 18 KRPLRIASRNSNLAKAQVHECISLLRSWY--PKLWFQLSTTETTGDRDKKIPLHLVENSY 75 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 FT+ ++ + G D A+HSAKD+P T L + I+ L D+ V+ H + L Sbjct: 76 FFTDGVDALVHKGVCDLAIHSAKDLPETPSLPVVAITRCLHPADLL-VYADHYVH--EPL 132 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 L +G+SSLRR A+L + ++D RG IE RL++L+ AI+LA A RL Sbjct: 133 PLRPRLGSSSLRRSAVLKQLFPQGQILDIRGTIEERLDQLHRGHYDAIVLAKAASLRLH- 191 Query: 182 EKVIKEILNIEDFPPSPG-QGAICIETHVNNPKAQELVKVIN 222 + +IE PP QG++ I + K ++L I+ Sbjct: 192 ---LHHAYSIELPPPYHALQGSLAITAKDHAGKWKQLFTPIH 230 >gi|322782664|gb|EFZ10527.1| hypothetical protein SINV_04722 [Solenopsis invicta] Length = 331 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 62/176 (35%), Positives = 94/176 (53%), Gaps = 5/176 (2%) Query: 103 REDIRDVFISHTA---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159 RED RD + ++L L SVIGTSSLRR A L R + + + RG + TRL Sbjct: 44 REDPRDAVVMSKKFKDKTLSSLPKGSVIGTSSLRRSAQLSRNMPHLKIENIRGNLNTRLK 103 Query: 160 KLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217 KL+ N AI+LA AG+KR+ E I ++L E+ + GQGA+ +E ++ + + L Sbjct: 104 KLDDENGPYAAIILAAAGLKRMGWEDRISQLLEPEEALYAVGQGALGVECRQSDWEIRSL 163 Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 ++ + +T CER+FL L G C + +A + K + L G V + DG+ Sbjct: 164 LEPLFDLETTLRCVCERSFLKTLGGGCSAPVAVSSSLKENELTITGAVWSLDGQTL 219 >gi|323451311|gb|EGB07188.1| hypothetical protein AURANDRAFT_59094 [Aureococcus anophagefferens] Length = 331 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 117/247 (47%), Gaps = 9/247 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLT-EIGGKGLF 64 +I TR SPLA+ A +L P ++ +S+ G+ N L + F Sbjct: 18 VKIATRPSPLAVKQAERVAETLR--RADPALTTELVRISSTGEYRNNTPLPLALDPTVDF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMP--TKLLKGLQISAYLPR-EDIRDVFISHTAQSLKDL 121 T ++ + SG +D AVHS KD+P + L+++ +LPR E D + + + L + Sbjct: 76 TGLLDDAVGSGAVDVAVHSLKDLPPANRWRGDLRVACHLPRTESAADALVGYASMDL--V 133 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GT+S RR+ALL R D+ V+ RG + RL L+ A++L AG++RL+ Sbjct: 134 PRGARVGTASQRRRALLRCARPDLDVVTVRGNVHARLETLDRGDVDALILGAAGLQRLEL 193 Query: 182 EKVIKE-ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + IL+ ++ P+P QG + + +L+ + D + ERA L Sbjct: 194 LDARRHAILSFDEMLPAPAQGIVGAVARGDGGALGDLLARADDRDARIAATAERAVLDVA 253 Query: 241 DGSCKSA 247 D + A Sbjct: 254 DAASPGA 260 >gi|15617976|ref|NP_224260.1| porphobilinogen deaminase [Chlamydophila pneumoniae CWL029] gi|15835588|ref|NP_300112.1| porphobilinogen deaminase [Chlamydophila pneumoniae J138] gi|16752992|ref|NP_445265.1| porphobilinogen deaminase [Chlamydophila pneumoniae AR39] gi|33241388|ref|NP_876329.1| porphobilinogen deaminase [Chlamydophila pneumoniae TW-183] gi|11386861|sp|Q9Z9C9|HEM3_CHLPN RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|4376307|gb|AAD18205.1| Porphobilinogen Deaminase [Chlamydophila pneumoniae CWL029] gi|7189637|gb|AAF38528.1| porphobilinogen deaminase HemC, putative [Chlamydophila pneumoniae AR39] gi|8978426|dbj|BAA98263.1| porphobilinogen deaminase [Chlamydophila pneumoniae J138] gi|33235896|gb|AAP97986.1| hydroxymethylbilane synthase [Chlamydophila pneumoniae TW-183] Length = 234 Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 71/222 (31%), Positives = 105/222 (47%), Gaps = 11/222 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+P RI +R S LA A E S L + P + T GDR L + Sbjct: 18 KRPLRIASRNSNLAKAQVHECISLLRSWY--PKLWFQLSTTETTGDREKKIPLHLVENSY 75 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 FT+ ++ + G D A+HSAKD+P T L + I+ L D+ V+ H + L Sbjct: 76 FFTDGVDALVHKGVCDLAIHSAKDLPETPSLPVVAITRCLHPADLL-VYADHYVH--EPL 132 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 L +G+SSLRR A+L + ++D RG IE RL++L+ AI+LA A RL Sbjct: 133 PLSPRLGSSSLRRSAVLKQLFPQGQILDIRGTIEERLDQLHRGHYDAIVLAKAASLRLH- 191 Query: 182 EKVIKEILNIEDFPPSPG-QGAICIETHVNNPKAQELVKVIN 222 + +IE PP QG++ I + K ++L I+ Sbjct: 192 ---LHHAYSIELPPPYHALQGSLAITAKDHAGKWKQLFTPIH 230 >gi|226294065|gb|EEH49485.1| porphobilinogen deaminase [Paracoccidioides brasiliensis Pb18] Length = 249 Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 90/189 (47%), Gaps = 14/189 (7%) Query: 97 ISAYLPREDIRDVFISHTA---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 + A +PRED RDV + +L +L SV+GTSS+RR A L R + D RG Sbjct: 12 LGAVVPREDPRDVLVIKKGLPKMTLAELPAGSVVGTSSVRRIAQLSRHYPHLKPQDIRGN 71 Query: 154 IETRLNKLNNNKA--HAILLAYAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHV 209 IETRL KL+ I+LA AG+ R + I L+ ++ + GQGA+ +E Sbjct: 72 IETRLAKLDAEDGPFTCIILAAAGLLRTGQGARISHFLDSKNGKMLHAVGQGALGVEIRA 131 Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA-------GFAYCKGSTLYFY 262 ++ + + +++ I + ER+ L L+G C + + G + L Sbjct: 132 DDERMRAMIEKIGDRRATFACLAERSLLRTLEGGCSAPLGVETEWVKGEGQGEVEKLRLR 191 Query: 263 GIVLASDGK 271 IV + DGK Sbjct: 192 AIVASVDGK 200 >gi|302850188|ref|XP_002956622.1| hypothetical protein VOLCADRAFT_119454 [Volvox carteri f. nagariensis] gi|300258149|gb|EFJ42389.1| hypothetical protein VOLCADRAFT_119454 [Volvox carteri f. nagariensis] Length = 206 Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 72/126 (57%) Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S +GTSS RR A + + V+ RG +ETRL ++ + + A +L+ AG++RL E + Sbjct: 6 SRVGTSSSRRAAQIRHGFPHLQVVQLRGNVETRLERIKSREISATVLSMAGLQRLGCEDM 65 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 +L++++ P+ QGA+ + ++P + + I+H T+ V+ ERA L L GS Sbjct: 66 ASAVLSMDEMLPAACQGAVGVVCREDDPWVIQQLTAISHRSTFLEVSAERACLTALLGSE 125 Query: 245 KSAIAG 250 ++ AG Sbjct: 126 EAGRAG 131 >gi|290770684|emb|CAY79080.2| Hem3p [Saccharomyces cerevisiae EC1118] Length = 239 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 5/168 (2%) Query: 87 MPTKLLKGLQISAYLPREDIRDVFIS---HTAQSLKDLALHSVIGTSSLRRKALLLRWRS 143 MPT L +G ++ R D D + +SL DL ++GTSS+RR A L R Sbjct: 1 MPTLLPEGFELGGITKRVDPTDCLVMPFYSAYKSLDDLPDGGIVGTSSVRRSAQLKRKYP 60 Query: 144 DISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQG 201 + RG I+TRL KL++ K+ I+LA AG+ R+ E I + + + + GQG Sbjct: 61 HLKFESVRGNIQTRLQKLDDPKSPYQCIILASAGLMRMGLENRITQRFHSDTMYHAVGQG 120 Query: 202 AICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 A+ IE + K +++ I + ERA + L+G C I Sbjct: 121 ALGIEIRKGDTKMMKILDEICDLNATICCLSERALMRTLEGGCSVPIG 168 >gi|260890849|ref|ZP_05902112.1| hydroxymethylbilane synthase [Leptotrichia hofstadii F0254] gi|260859402|gb|EEX73902.1| hydroxymethylbilane synthase [Leptotrichia hofstadii F0254] Length = 135 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 2/134 (1%) Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 +LA AG+KR+ E I E + + F P+PGQG +CI+ N+ K L+K+IN ++ Sbjct: 1 MLAAAGLKRVGLENRITEYFDTDSFMPAPGQGILCIQCRENDNKILNLLKIINDDEVTIM 60 Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 ER F DG C + I + +G+TL G+ + +IF EV GNR + Sbjct: 61 CKAEREFSKIFDGGCHTPIGCSSVIEGNTLKLKGMFNDNGTRIFKEVE--GNRENPKETA 118 Query: 290 RDAAQYIRFISNKN 303 + A+ I+ KN Sbjct: 119 QKLAEEIKEEEMKN 132 >gi|307254894|ref|ZP_07536716.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306862135|gb|EFM94107.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] Length = 119 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/103 (40%), Positives = 58/103 (56%), Gaps = 2/103 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR SPLAL A + L + P ++ ++ + TKGD I + L +IGGKG Sbjct: 7 KDTLRIATRQSPLALWQANFVKDELE--KRFPELSVELVTMVTKGDVILDTPLAKIGGKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPRED 105 LF +E+E L+ D AVHS KD+P +GL ++ RED Sbjct: 65 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICERED 107 >gi|297521378|ref|ZP_06939764.1| porphobilinogen deaminase [Escherichia coli OP50] Length = 92 Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 2/89 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKG 94 +E+E L+ D AVHS KD+P + +G Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEFPQG 92 >gi|289525338|emb|CBJ14814.1| porphobilinogen deaminase [Chlamydia trachomatis Sweden2] Length = 219 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 5/173 (2%) Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQIS 98 II +T+GD L + G FT++++ + SG+ D +HSAKD+P + I+ Sbjct: 31 IITTTTQGDLDQETPLCAVENTGFFTDDVDFLVQSGQCDLGIHSAKDLPENPKATVISIT 90 Query: 99 AYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRL 158 A + D RD+ + H L IG+SS+RRK LL + D RG I+TRL Sbjct: 91 ASI---DPRDILVFHEKYLSIPLPRRLRIGSSSVRRKELLSLLYPSAIITDIRGTIQTRL 147 Query: 159 NKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNN 211 L AI++A A + RL +IL + P G+ AI H+ + Sbjct: 148 KLLEEKNFDAIVMANAAVSRLGLRLPCTKILP-PPYHPLQGRLAITASRHIRS 199 >gi|166154510|ref|YP_001654628.1| porphobilinogen deaminase [Chlamydia trachomatis 434/Bu] gi|166155385|ref|YP_001653640.1| porphobilinogen deaminase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|237802722|ref|YP_002887916.1| porphobilinogen deaminase [Chlamydia trachomatis B/Jali20/OT] gi|237804644|ref|YP_002888798.1| porphobilinogen deaminase [Chlamydia trachomatis B/TZ1A828/OT] gi|165930498|emb|CAP03991.1| porphobilinogen deaminase [Chlamydia trachomatis 434/Bu] gi|165931373|emb|CAP06945.1| porphobilinogen deaminase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|231272944|emb|CAX09855.1| porphobilinogen deaminase [Chlamydia trachomatis B/TZ1A828/OT] gi|231273956|emb|CAX10748.1| porphobilinogen deaminase [Chlamydia trachomatis B/Jali20/OT] Length = 219 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 5/173 (2%) Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQIS 98 II +T+GD L + G FT++++ + SG+ D +HSAKD+P + I+ Sbjct: 31 IITTTTQGDLDQETPLCAVENTGFFTDDVDFLVQSGQCDLGIHSAKDLPENPKATVVSIT 90 Query: 99 AYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRL 158 A + D RD+ + H L IG+SS+RRK LL + D RG I+TRL Sbjct: 91 ASI---DPRDILVFHEKYLSIPLPRRLRIGSSSVRRKELLSLLYPSAIITDIRGTIQTRL 147 Query: 159 NKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNN 211 L AI++A A + RL +IL + P G+ AI H+ + Sbjct: 148 KLLEEKNFDAIVMANAAVSRLGLRLPCTKILP-PPYHPLQGRLAITASRHIRS 199 >gi|29840104|ref|NP_829210.1| porphobilinogen deaminase [Chlamydophila caviae GPIC] gi|29834452|gb|AAP05088.1| porphobilinogen deaminase HemC, putative [Chlamydophila caviae GPIC] Length = 242 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 67/225 (29%), Positives = 99/225 (44%), Gaps = 11/225 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++P RI +R S LA A A E L P + I + T GD+ L + Sbjct: 18 RRPLRIASRRSTLAQAQAHECVCLLRSW--FPKLWVQIHTVHTLGDKDKKTPLHLVENSQ 75 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 FT+ ++K ++ G AVHSAKD+P I A D D+ + K Sbjct: 76 FFTDAVDKLVLRGNCHLAVHSAKDLPNP--SKTSIVAITNGLDPSDLLVYGERYLWKRFP 133 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +G+SSLRR +L ++D RG IE RL +L + K AI++A A + RL Sbjct: 134 KNPRLGSSSLRRGEMLKNLFPKGQILDIRGTIEERLKQLESGKYDAIVVAKAAVIRLHLR 193 Query: 183 KVIKEILNIEDFPPS--PGQGAICIETHVNNPKAQELVKVINHED 225 + L PP P QG + I N ++L+ +N D Sbjct: 194 LPYTKTL-----PPPYHPLQGRLSITAAKNIEAWKKLLLPLNASD 233 >gi|149452688|ref|XP_001516450.1| PREDICTED: similar to hydroxymethylbilane synthase [Ornithorhynchus anatinus] Length = 218 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 45/116 (38%), Positives = 62/116 (53%), Gaps = 4/116 (3%) Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDLALHSVIGTSSLR 133 +D VHS KD+PT L G I A RE D + H ++L L SV+GTSSLR Sbjct: 90 VDLVVHSLKDLPTVLPPGFTIGAVCKRESPYDAVVFHPKHVGKTLATLPEKSVVGTSSLR 149 Query: 134 RKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKVIKEI 188 R A L R + RG + TRL KL+ + AI+LA AG++RL + + ++ Sbjct: 150 RAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQRLGWQSRLGQV 205 >gi|41186|emb|CAA47279.1| hydroxymethylbilane synthase [Escherichia coli K-12] Length = 89 Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKL 91 +E+E L+ D AVHS KD+P + Sbjct: 64 KELEVALLENRADIAVHSMKDVPVEF 89 >gi|62184962|ref|YP_219747.1| porphobilinogen deaminase [Chlamydophila abortus S26/3] gi|62148029|emb|CAH63781.1| putative porphobilinogen deaminase [Chlamydophila abortus S26/3] Length = 249 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 92/207 (44%), Gaps = 11/207 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 + K+P RI +R S LA A E L P I I +ST+GD+ + + Sbjct: 16 LGKRPLRIASRKSILAQAQVHECVRLLRSW--FPKLWIQIHTISTRGDKDKTTPIRLVEN 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 FT+ ++K +I G AVHSAKD+P + A D D+ + + Sbjct: 74 SQFFTDTVDKLVIRGNCHLAVHSAKDLPDP--PATPVVAITKGLDPSDLLVYAERYLWQR 131 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 +G+SS RR L ++D RG IE RL +L N K AI++A A + RL Sbjct: 132 FPKVPRLGSSSSRRGETLKMLFPTGRILDIRGTIEERLEQLENGKYDAIVVAKAAVLRLH 191 Query: 181 KEKVIKEILNIEDFPPS--PGQGAICI 205 + ++L PP P QG + I Sbjct: 192 LQLPYTKVL-----PPPYHPLQGRLAI 213 >gi|23011609|ref|ZP_00051918.1| COG0181: Porphobilinogen deaminase [Magnetospirillum magnetotacticum MS-1] Length = 119 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/115 (33%), Positives = 57/115 (49%) Query: 191 IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250 +E+ P+ QGA+ IE + + L+ + T +++ ER LAELDGSC++ IA Sbjct: 1 MEEMLPAVAQGALGIECRARDDAIRALLAPVACATTTTALDAERGLLAELDGSCRTPIAA 60 Query: 251 FAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 A +G L G++ DG V R G DA IGRDA ++ + F Sbjct: 61 LARIQGDRLSLDGLLFLPDGSRHWAVHREGATSDAAEIGRDAGAELKRAAGDVYF 115 >gi|238488537|ref|XP_002375506.1| porphobilinogen deaminase, putative [Aspergillus flavus NRRL3357] gi|220697894|gb|EED54234.1| porphobilinogen deaminase, putative [Aspergillus flavus NRRL3357] Length = 230 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 13/189 (6%) Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDIS 146 MPT L +++A PR+D RD I L SL A+L R + Sbjct: 1 MPTSLPDSCELAAIPPRDDPRDALIVKAGLPYTSL--------KSLPEGAVLRRLYPHLR 52 Query: 147 VIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRLKKEKVIKEILNIED--FPPSPGQGA 202 + RG +ETRL K++N+ + ++++ AG++R+ E I + L +D + GQGA Sbjct: 53 FANLRGNVETRLAKVDNSDSEYTCMVMSAAGLERVGLEHRISQYLGSKDGGILHAVGQGA 112 Query: 203 ICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA-GFAYCKGSTLYF 261 + +E + K QEL+ + + + + ER+ + L+G C + I + L Sbjct: 113 LGLEIRKGDRKMQELLGQLADQRSTLACLAERSLMRTLEGGCSAPIGVETEWISAGALSI 172 Query: 262 YGIVLASDG 270 + IV++ DG Sbjct: 173 HAIVVSLDG 181 >gi|149041456|gb|EDL95297.1| hydroxymethylbilane synthase, isoform CRA_c [Rattus norvegicus] Length = 208 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 43/108 (39%), Positives = 58/108 (53%), Gaps = 2/108 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT Sbjct: 21 IRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKSLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH 113 +E+E L E+D VHS KD+PT L G I A RE+ D + H Sbjct: 79 KELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFH 126 >gi|149041455|gb|EDL95296.1| hydroxymethylbilane synthase, isoform CRA_b [Rattus norvegicus] Length = 192 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 2/107 (1%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 R+GTR S LA + L ++ P II +ST GD+I + L++IG K LFT+ Sbjct: 6 RVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKSLFTK 63 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH 113 E+E L E+D VHS KD+PT L G I A RE+ D + H Sbjct: 64 ELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFH 110 >gi|329945529|ref|ZP_08293267.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328528774|gb|EGF55723.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 149 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 12/140 (8%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPH---------NIVIIPLSTKGDRITNRTLT 56 R+GTR S LAL + + +L ++V + GDR L Sbjct: 13 LRLGTRGSRLALTQSGQVADALRQAAAAGARAPGCDNLELDLVTVRTDGDGDRTP---LR 69 Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116 ++GG G+F + L+ GE+D VHS KD+PT+ ++GL++ PRED D + Sbjct: 70 QLGGVGVFAARLRHALLDGEVDLVVHSFKDLPTQPVEGLEVICVPPREDPHDALCARDGL 129 Query: 117 SLKDLALHSVIGTSSLRRKA 136 +L L + +GT S RR A Sbjct: 130 TLATLPDGARVGTGSPRRAA 149 >gi|154762311|gb|ABS86004.1| porphobilinogen deaminase [Cervus elaphus] gi|155494266|gb|ABS86002.2| porphobilinogen deaminase [Cervus elaphus] gi|155494267|gb|ABS86003.2| porphobilinogen deaminase [Cervus elaphus] gi|155494268|gb|ABS86005.2| porphobilinogen deaminase [Cervus elaphus] gi|155494269|gb|ABS86006.2| porphobilinogen deaminase [Cervus elaphus] gi|155494270|gb|ABS86007.2| porphobilinogen deaminase [Cervus elaphus] gi|155494271|gb|ABS86008.2| porphobilinogen deaminase [Cervus elaphus canadensis] gi|155494272|gb|ABS86009.2| porphobilinogen deaminase [Cervus elaphus canadensis] gi|155494273|gb|ABS86010.2| porphobilinogen deaminase [Cervus elaphus canadensis] gi|155494274|gb|ABS86011.2| porphobilinogen deaminase [Cervus elaphus canadensis] Length = 195 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 1/121 (0%) Query: 151 RGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209 RG + TRL KL+ + AI+LA AG++R+ + + +IL+ E+ + GQGA+ +E Sbjct: 1 RGNLNTRLQKLDELQEFSAIILAAAGLQRMGWQNRVGQILHPEECMYAVGQGALGVEVRA 60 Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269 + +LV V++ +T ER+FL L+G C +A K LY G V + + Sbjct: 61 KDQDILDLVGVLHDPETLLRCIAERSFLRHLEGGCSVPVAVHTTIKDGQLYLTGGVWSLN 120 Query: 270 G 270 G Sbjct: 121 G 121 >gi|729693|sp|P40129|HEM3_ERWCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|41671|emb|CAA44890.1| hemC [Erwinia chrysanthemi] Length = 89 Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 2/86 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L H P + ++P+ T+G + + L ++GGKGLF Sbjct: 6 LRIATRQSPLALWQAHFVQQRLEACH--PGLRVELVPMVTRGXLLLDTPLAKVGGKGLFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKL 91 +E+E L+ D AVHS KD+P + Sbjct: 64 KELELALLENRADIAVHSMKDVPVEF 89 >gi|154762327|gb|ABS86012.1| porphobilinogen deaminase [Capra hircus] gi|154762329|gb|ABS86013.1| porphobilinogen deaminase [Capra hircus] Length = 195 Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 1/121 (0%) Query: 151 RGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209 RG + TRL KL+ + AI+LA AG++R+ + + +IL+ E+ + GQGA+ +E Sbjct: 1 RGNLNTRLRKLDELQEFSAIILAAAGLQRMGWQNRVGQILHPEECMYAVGQGALGVEVRA 60 Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269 + +LV V++ +T ER+FL L+G C +A K LY G V + + Sbjct: 61 KDQDILDLVGVLHDPETLLRCIAERSFLRHLEGGCSVPVAVHTAIKDGQLYLTGGVWSLN 120 Query: 270 G 270 G Sbjct: 121 G 121 >gi|294885317|ref|XP_002771270.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983] gi|239874766|gb|EER03086.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983] Length = 556 Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 59/240 (24%), Positives = 101/240 (42%), Gaps = 37/240 (15%) Query: 47 GDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI 106 GD L ++ G+FT + L++G D VHS KD+P G + A LPR D Sbjct: 48 GDTNLKDPLWKMPETGVFTSFLRDGLMNGAFDLVVHSWKDLPLAEESGTTVVATLPRADP 107 Query: 107 RDVFI--SHTAQSLKDLALHSVIGTSSLRRKALLLRWR-------SDISVIDFRGKIETR 157 RD+ + + + ++ +SS RR+ L + + + D RG I+TR Sbjct: 108 RDLLLIRRDAIEEMTSEGGKLIVLSSSPRRQFNLTPFLESVVPGVTSVQFRDVRGNIQTR 167 Query: 158 LNKLNNN---------KAHAILLAYAGIKRLKK-------------EKVIKE----ILNI 191 + KL + + H +++A A + R + + I E +L + Sbjct: 168 MKKLMDPTIHDESLGCRPHGLVVAKAAVDRFIRSTREEFKESRQLVQGYISECRCMVLPL 227 Query: 192 EDFPPSPGQGAICIETHVNNPK--AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 P + QGA+ IE K +++V+ +N T+D+ + E+ L G C I Sbjct: 228 SANPTAAAQGALGIEVSTAPEKEHVRKIVRSLNDRSTFDAASKEKELLNSYGGGCHQKIG 287 >gi|255029220|ref|ZP_05301171.1| porphobilinogen deaminase [Listeria monocytogenes LO28] Length = 128 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 5/97 (5%) Query: 189 LNIEDFPP-----SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 L +ED PP + GQGA+ IE ++ + ++++ I+HE+T V ER FL +L+G Sbjct: 3 LKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKKLNGG 62 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 C+ IAGFA + F G+V +DG I E + G Sbjct: 63 CEIPIAGFATRANEFVQFKGLVGNADGSIILESEQVG 99 >gi|322694171|gb|EFY86008.1| porphobilinogen deaminase Hem3, putative [Metarhizium acridum CQMa 102] Length = 654 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 30/241 (12%) Query: 69 EKKLISGE--IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLAL 123 E+KL SG+ + C V S D+P R+D RD + SL+ L Sbjct: 98 EEKLTSGQWTLSCVV-SKTDIPL-------------RDDPRDALVVKAGLAYTSLQTLPP 143 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRLKK 181 +V+GTSS+R A L R + + RG ++TRL K+ + ++ ++++ AG++R+ Sbjct: 144 GAVVGTSSVRHSAQLRRLYPHLRFSNLRGNVDTRLAKVEDPESEYTCMIMSAAGLERVGL 203 Query: 182 EKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I + L +D + GQGA+ +E + K + V + + + ERA L Sbjct: 204 KSRISQYLGSKDGGILHAVGQGALGLEIRKGDSKTLQFVNQLGDRKSTLASLAERALLRA 263 Query: 240 LDGSCKSAIA----GFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDA 292 L+G C I + L IV++ DG E S + A +GRD Sbjct: 264 LEGGCSVPIGVETEWIGQSEHQVLRMKAIVVSLDGTECVERSIDAMLLTNDQASQLGRDL 323 Query: 293 A 293 A Sbjct: 324 A 324 >gi|225020272|ref|ZP_03709464.1| hypothetical protein CORMATOL_00275 [Corynebacterium matruchotii ATCC 33806] gi|224947016|gb|EEG28225.1| hypothetical protein CORMATOL_00275 [Corynebacterium matruchotii ATCC 33806] Length = 152 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 67/140 (47%), Gaps = 1/140 (0%) Query: 158 LNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217 + K+++ + A++LAYAG+ R+ + E+ + +F P+P QGA+ +E ++ Sbjct: 1 MAKVHDGELDAVVLAYAGLSRVHRADEATEVFDPLEFLPAPAQGALAVECRADDADTIAA 60 Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEV 276 + I + + ER LA L+ C + +A +A + + + V+A DG Sbjct: 61 ITTIADSKAYACAHTERVVLARLEAGCTAPVAAYATVAADNIMTLHAAVIAMDGSATLRA 120 Query: 277 SRNGNRCDAINIGRDAAQYI 296 + G A N+G A+ + Sbjct: 121 TAAGPIDTAENLGMTVARAL 140 >gi|306835115|ref|ZP_07468155.1| possible hydroxymethylbilane synthase [Corynebacterium accolens ATCC 49726] gi|304568972|gb|EFM44497.1| possible hydroxymethylbilane synthase [Corynebacterium accolens ATCC 49726] Length = 158 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 1/140 (0%) Query: 150 FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209 RG I+TR++K+ + + A++LAYAG+ R E +I + E F P+P QGA+ IE Sbjct: 2 LRGNIDTRMSKVTDGELDAVVLAYAGLLRGGYEDRASDIFDPELFMPAPAQGALAIEAVA 61 Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269 +A + + E + ERA LA L+ C + +A + G L G V A D Sbjct: 62 GT-EAAAALDAVVDEQATAAALAERAVLARLEAGCTAPVAATSRWNGDQLTVRGGVFALD 120 Query: 270 GKIFHEVSRNGNRCDAINIG 289 G + +G +A +G Sbjct: 121 GSRQLTATASGTAAEAAELG 140 >gi|77799154|gb|ABB03720.1| putative porphobilinogen deaminase [Sorghum bicolor] Length = 98 Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 3/94 (3%) Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFH 274 E + +NHEDT +V CER FLA LDG+C++ IA +AY K F G++ + DG Sbjct: 2 EYLSSLNHEDTRLAVACEREFLAVLDGNCRTPIAAYAYRDKDGNCSFRGLLASPDGSKVF 61 Query: 275 EVSRNGNRC--DAINIGRDAAQYIRFISNKNVFN 306 E +R+G D + +G+DA ++ + F+ Sbjct: 62 ETTRSGPYSFDDMVELGKDAGHELKAKAGPGFFD 95 >gi|323338379|gb|EGA79604.1| Hem3p [Saccharomyces cerevisiae Vin13] Length = 152 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 2/126 (1%) Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLKKEK 183 ++GTSS+RR A L R + RG I+TRL KL++ K+ I+LA AG+ R+ E Sbjct: 8 IVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIILASAGLMRMGLEN 67 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + + + GQGA+ IE + K +++ I + ERA + L+G Sbjct: 68 RITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCLSERALMRTLEGG 127 Query: 244 CKSAIA 249 C I Sbjct: 128 CSVPIG 133 >gi|317471677|ref|ZP_07931019.1| porphobilinogen deaminase domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|316900848|gb|EFV22820.1| porphobilinogen deaminase domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 133 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 2/130 (1%) Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227 A+++A AG+KR ++ I ++E+ P+ GQG +C++ V Q L I+ +T Sbjct: 5 ALIMAAAGLKRAGLKERISRYFSVEEMLPAAGQGTLCVQ--VRKDFDQSLFFCIHDRETE 62 Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 ER F+ LDG C S IA +A G+ L G+ + ++S NG DA Sbjct: 63 LVTEAERGFVRALDGGCSSPIAAYAEITGNDLCLTGLYYNAADNTGRKMSINGKAQDAGE 122 Query: 288 IGRDAAQYIR 297 +G A+ I+ Sbjct: 123 LGCRLAEQIQ 132 >gi|326772618|ref|ZP_08231902.1| hydroxymethylbilane synthase [Actinomyces viscosus C505] gi|326637250|gb|EGE38152.1| hydroxymethylbilane synthase [Actinomyces viscosus C505] Length = 140 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 3/86 (3%) Query: 37 NIVIIPLSTKGDRITNRT-LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGL 95 I ++ + T GD +RT L ++GG G+F + L+ GE+D VHS KD+PT+ ++GL Sbjct: 55 GIDLVTVRTDGD--GDRTPLRQLGGVGVFAARLRHALLDGEVDLVVHSFKDLPTQPVEGL 112 Query: 96 QISAYLPREDIRDVFISHTAQSLKDL 121 ++ PRED RD + + +L DL Sbjct: 113 EVICVPPREDPRDALCARDSLTLADL 138 >gi|295670329|ref|XP_002795712.1| porphobilinogen deaminase [Paracoccidioides brasiliensis Pb01] gi|226284797|gb|EEH40363.1| porphobilinogen deaminase [Paracoccidioides brasiliensis Pb01] Length = 216 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 11/166 (6%) Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYA 174 +L +L SV+GTSS+RR A L R + D RG IETRL KL+ I+LA A Sbjct: 2 TLAELPAGSVVGTSSVRRIAQLSRHYPHLKPQDIRGNIETRLAKLDAEDGPFTCIILAAA 61 Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 G+ R + I L+ ++ + GQGA+ +E ++ + + +++ I + Sbjct: 62 GLLRSGQGARISHFLDSKNGKMLHAVGQGALGVEIRADDERMRAMIEKIGDRRATFACLA 121 Query: 233 ERAFLAELDGSCKSAIA-GFAYCKGS------TLYFYGIVLASDGK 271 ER+ L L+G C + + + KG L IV + DGK Sbjct: 122 ERSLLRALEGGCSAPLGVETEWVKGEGEGEVDKLRLRAIVASVDGK 167 >gi|293194048|ref|ZP_06609930.1| hydroxymethylbilane synthase [Actinomyces odontolyticus F0309] gi|292819802|gb|EFF78811.1| hydroxymethylbilane synthase [Actinomyces odontolyticus F0309] Length = 166 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 3/113 (2%) Query: 162 NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH-VNNPKAQELVKV 220 + A++LA AG++R+ + ++L+ P+P QGA+ IET ++P L+ Sbjct: 2 TGERLDAVVLALAGLRRIGLDAHATDVLHPAIMMPAPSQGALAIETRDEDDPLLHALLGT 61 Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGK 271 +NH T + + ERA L+ L C + + FA S L V++ DG+ Sbjct: 62 LNHRPTALAASAERAVLSALGAGCAAPVGAFARVDEASSVLLLDARVMSVDGR 114 >gi|255030292|ref|ZP_05302243.1| porphobilinogen deaminase [Listeria monocytogenes LO28] Length = 84 Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 2/85 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDM 87 LF E+E+ L ID AVHS KD+ Sbjct: 60 LFVSEVEQALSDEAIDFAVHSMKDV 84 >gi|330444348|ref|YP_004377334.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain-containing protein [Chlamydophila pecorum E58] gi|328807458|gb|AEB41631.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Chlamydophila pecorum E58] Length = 237 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 13/207 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +I +R S LA A E L + P ++I T+GDR L I F Sbjct: 19 PLKIASRDSNLAKAQVNECLQLLRTSY--PKLQSLLITTKTQGDRDKLTPLHTIENSDFF 76 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPT-KLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 T +++ + G A+HSAKD+PT L + ++ L D+ V+ H + + Sbjct: 77 TRDVDALVCQGSCHIAIHSAKDLPTPSPLPLVALTRCLHPADLL-VYADHYTK--EPFPS 133 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +G+SS+RR +L + +++ RG IE RL +L+NN A++LA A RL Sbjct: 134 NPRLGSSSMRRGEVLKQLFPLGQILNIRGTIEERLQQLHNNTYDAVVLAKAAALRLGLSF 193 Query: 184 VIKEILNIEDFPPS--PGQGAICIETH 208 + E+L PP P QG + + + Sbjct: 194 LYSELL-----PPPYHPLQGRLALTAY 215 >gi|169837036|ref|ZP_02870224.1| Porphobilinogen deaminase [candidate division TM7 single-cell isolate TM7a] Length = 119 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 2/113 (1%) Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E + + F P+PGQG +CI+ N+ K + L+++IN ++ ER F DG C Sbjct: 1 MSEYFDTDFFMPAPGQGILCIQCRENDNKIRHLLEIINDDEVTMMCEAEREFSKIFDGGC 60 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + I + +G TL G+ + ++ EV GN+ + I + A+ I+ Sbjct: 61 HTPIGCSSVIEGDTLKLKGMFNDNGSRMLKEVE--GNKENPKEIAQKLAEEIK 111 >gi|327493887|gb|AEA86530.1| porphobilinogen deaminase [Euglena gracilis] Length = 210 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 5/106 (4%) Query: 149 DFRGKIETRLNKLNN--NKAHAILLAYAGIKRLKKEKVIKEILNIED---FPPSPGQGAI 203 D RG ++TRL KL + + A++LA +G++RL + E+L D F + GQGA+ Sbjct: 10 DVRGNVQTRLAKLEDPTHGYAALVLAVSGLERLALGHHVTEVLASTDRRWFGYAVGQGAL 69 Query: 204 CIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 ++ + ++ ++H++T ERA + EL+G C + IA Sbjct: 70 TVQCREGDAGTLRYLQHLHHQETAQRCIAERALMRELEGGCHAPIA 115 >gi|70931402|ref|XP_737390.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56512740|emb|CAH87819.1| hypothetical protein PC000109.00.0 [Plasmodium chabaudi chabaudi] Length = 169 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 4/111 (3%) Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248 LN P+ QG I + ++ NNP+ +++K IN E + N ER FL ++DGSC I Sbjct: 41 LNTNVMCPALCQGIIAVTSNKNNPEISQILKNINDEKSQIMANIERTFLHKIDGSCTMPI 100 Query: 249 AGFAYCKGSTLYFYGIVLASDGKIFH--EVSRNGNRCDAINIGRDAAQYIR 297 G+ + + F I+ +G H +V R+ N D I +AA+ I+ Sbjct: 101 GGYTKFSKNKIIFNAIINDINGLESHKIKVVRHLNNLDG--IADEAAEKIK 149 >gi|294896302|ref|XP_002775489.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983] gi|239881712|gb|EER07305.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983] Length = 539 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 104/258 (40%), Gaps = 59/258 (22%) Query: 47 GDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI 106 GD L ++ G+FT + L++G D VHS KD+P G + A LPR D Sbjct: 17 GDTNLKDPLWKMPETGVFTSFLRDGLMNGAFDLVVHSWKDLPLAEESGTTVVATLPRADP 76 Query: 107 RDVFI-------SHTAQSLKDLALHS---------------VIGTSSLRRKALLLRWRSD 144 RD+ + T++ K + L S V G +S++ + + R + Sbjct: 77 RDLLLIRRDAIEEMTSEGGKLIVLSSSPRRQFNLTPFLESVVPGVTSVQFRDV----RGN 132 Query: 145 ISV-----IDFRGKIETRLNKLNNN---------KAHAILLAYAGIKRL--KKEKVIKE- 187 I V + G ++TR+ KL + + H +++A A + R + KE Sbjct: 133 IQVQPMGSSPYEGLLQTRMRKLMDPTIHDESLGCRPHGLVVAKAAVDRFIRSTREEFKES 192 Query: 188 --------------ILNIEDFPPSPGQGAICIETHVNNPK--AQELVKVINHEDTWDSVN 231 +L + P + QGA+ IE K +++V+ +N T+D+ + Sbjct: 193 RQLVQGYISDCRCMVLPLSANPTAAAQGALGIEVSTAPEKEHVRKIVRSLNDRSTFDAAS 252 Query: 232 CERAFLAELDGSCKSAIA 249 E+ L G C I Sbjct: 253 KEKELLNSYGGGCHQKIG 270 >gi|329944047|ref|ZP_08292313.1| Porphobilinogen deaminase domain protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328531093|gb|EGF57944.1| Porphobilinogen deaminase domain protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 206 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 7/110 (6%) Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED-- 225 A++LA +G++RL E E+L++E P+P QGA+ +E A +D Sbjct: 34 AVVLALSGLRRLGLEHCASEVLDLETMLPAPAQGALAVEARAGEGSAALARAAAALDDEP 93 Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDG 270 T +V ERA +A L C + + +A+ G L +V + DG Sbjct: 94 TRLAVTAERALMARLGAGCAAPVGAWAHLSGGEQEQRVLALRAVVTSLDG 143 >gi|238488539|ref|XP_002375507.1| hypothetical protein AFLA_014870 [Aspergillus flavus NRRL3357] gi|220697895|gb|EED54235.1| hypothetical protein AFLA_014870 [Aspergillus flavus NRRL3357] Length = 90 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 2/83 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + P RIGTR S LA+ A R+ L + P + I L T GDR L G K Sbjct: 8 QPPLRIGTRRSNLAMVQAEGIRNCLQKI--APGRSFEIEALRTLGDRDQLTALYNFGAKS 65 Query: 63 LFTEEIEKKLISGEIDCAVHSAK 85 L+T E+E+KL +GE+D VH K Sbjct: 66 LWTTELEEKLNAGELDVIVHCLK 88 >gi|221488268|gb|EEE26482.1| porphobilinogen deaminase, putative [Toxoplasma gondii GT1] Length = 174 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 5/115 (4%) Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L + F P+ QG I ++ + L++ +N + CERAFL LDGSC++ Sbjct: 35 LLPADVFVPAVCQGIIGVQCRSADTGILSLLRELNSPSSRGQALCERAFLRALDGSCRTP 94 Query: 248 IAGFAYCKGST-LYFYGIVLASDGKIFHEVSRN--GNRC--DAINIGRDAAQYIR 297 IAG A + T L F G++ DGK R G R +A +GR A+ I+ Sbjct: 95 IAGIAEWRAKTELRFCGVLATPDGKQLFREERTVRGVRTPEEAEALGRAVAEEIK 149 >gi|306835113|ref|ZP_07468154.1| porphobilinogen deaminase [Corynebacterium accolens ATCC 49726] gi|304569028|gb|EFM44552.1| porphobilinogen deaminase [Corynebacterium accolens ATCC 49726] Length = 89 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 36/84 (42%), Positives = 45/84 (53%), Gaps = 6/84 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F+IGTR S LA A R L+D +IV +T GD TN E G G+FT Sbjct: 2 FQIGTRGSKLATTQAGHVRDWLIDAGFDSELHIV----TTAGD--TNMAPVERIGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPT 89 + + + L GE D AVHS KD+PT Sbjct: 56 QALREALCRGECDIAVHSFKDLPT 79 >gi|167038282|ref|YP_001665860.1| porphobilinogen deaminase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|166857116|gb|ABY95524.1| Porphobilinogen deaminase [Thermoanaerobacter pseudethanolicus ATCC 33223] Length = 168 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 1/111 (0%) Query: 143 SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGA 202 SDI ++ RG + TRL K+ I+L+ AG+ RL E +I E + P+P QG Sbjct: 9 SDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGLESIITEYFPPDVVVPAPCQGI 68 Query: 203 ICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252 + +E + + QE I T+ + ER L +C+ +A Sbjct: 69 LAVEIAESFDNIFQEFYSYIVDRRTFFEASVERELLKAFGVNCRQPFGAYA 119 >gi|62467569|gb|AAX83934.1| Hem3p [Saccharomyces cerevisiae] Length = 97 Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 6/99 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + IG R S LA+ + + + K P ++ + L T GD+I + L GG Sbjct: 1 MGPETLHIGGRKSKLAVIQSNHVLKLIEE--KYPDYDCKVFTLQTLGDQIQFKPLYSFGG 58 Query: 61 KGLFTEEIEKKLI----SGEIDCAVHSAKDMPTKLLKGL 95 K L+T+E+E L S ++D VHS KDMPT L +G Sbjct: 59 KALWTKELEDHLYHDDPSKKLDLIVHSLKDMPTLLPEGF 97 >gi|256751190|ref|ZP_05492071.1| Porphobilinogen deaminase [Thermoanaerobacter ethanolicus CCSD1] gi|256749915|gb|EEU62938.1| Porphobilinogen deaminase [Thermoanaerobacter ethanolicus CCSD1] Length = 161 Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 1/111 (0%) Query: 143 SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGA 202 SDI ++ RG + TRL K+ I+L+ AG+ RL E +I E + P+P QG Sbjct: 2 SDIQIVPVRGNVRTRLKKMEELNLDGIVLSAAGLHRLGLENIITEYFPPDVVVPAPCQGI 61 Query: 203 ICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252 + +E + + QE I T+ + ER L +C+ +A Sbjct: 62 LAVEIAESFDNIFQEFYPYIVDRRTFFEASVERELLKVFGVNCRQPFGAYA 112 >gi|73760286|dbj|BAE20060.1| hydroxymethylbilane synthase [Capra hircus] Length = 109 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 1/81 (1%) Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLA 172 ++L+ L SV+GTSSLRR A L R + + RG + TRL KL+ + AI+LA Sbjct: 28 VGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFRNIRGNLNTRLRKLDELQEFSAIILA 87 Query: 173 YAGIKRLKKEKVIKEILNIED 193 AG++R+ + + +IL+ E+ Sbjct: 88 AAGLQRMGWQNRVGQILHPEE 108 >gi|167946284|ref|ZP_02533358.1| porphobilinogen deaminase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 51 Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 30/43 (69%) Query: 55 LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQI 97 + GGKGLF +E+E+ ++ G D AVHS KD+P +L +GL + Sbjct: 1 MRRFGGKGLFVKELEQAMLEGRADIAVHSMKDVPAELPEGLHL 43 >gi|467060|gb|AAA17244.1| hem3a [Mycobacterium leprae] Length = 134 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 8/85 (9%) Query: 196 PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK 255 P+P QGAI +E + + ++ ++ DT +V ER LAEL+ C + + A Sbjct: 5 PAPAQGAIAVECRAGDSRLVAVLAALDDADTRAAVTAERVLLAELEAGCSAPVGAIAQVV 64 Query: 256 GSTLYFYGIVLASDGKIFHEVSRNG 280 S + +G++F E+S G Sbjct: 65 ES--------IDGEGRVFEELSLRG 81 >gi|146332076|gb|ABQ22544.1| porphobilinogen deaminase-like protein [Callithrix jacchus] Length = 163 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 43/86 (50%) Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + +IL+ E+ + GQGA+ +E + ++V V++ +T ERAFL L+G C Sbjct: 4 VGQILHPEECMYAVGQGALGVEVRAKDQDILDMVGVLHDPETLLRCIAERAFLRHLEGGC 63 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG 270 +A K LY G V + DG Sbjct: 64 SVPVAVHTAMKDGQLYLTGGVWSLDG 89 >gi|307826363|ref|ZP_07656567.1| Porphobilinogen deaminase [Methylobacter tundripaludum SV96] gi|307732604|gb|EFO03477.1| Porphobilinogen deaminase [Methylobacter tundripaludum SV96] Length = 337 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 40/74 (54%) Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL++ + AI+LA AG+KRL + I + L+ P+ GQGAI IE + Sbjct: 2 VNTRLSKLDSGEYDAIILASAGLKRLGMAERITQCLDTSVSLPAIGQGAIGIECRIALLV 61 Query: 214 AQELVKVINHEDTW 227 A I +W Sbjct: 62 AGAGAFYIADYASW 75 >gi|332187060|ref|ZP_08388801.1| porphobilinogen deaminase, C-terminal domain protein [Sphingomonas sp. S17] gi|332013070|gb|EGI55134.1| porphobilinogen deaminase, C-terminal domain protein [Sphingomonas sp. S17] Length = 107 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 32/67 (47%) Query: 205 IETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGI 264 IET ++ A L+ I+H +T V ER+ LA L C S +A A G L Sbjct: 3 IETRADDAAATMLIGSIDHAETHACVMAERSLLAALQADCHSPVAALASLSGEMLTLRAE 62 Query: 265 VLASDGK 271 +LA DG Sbjct: 63 LLAEDGS 69 >gi|51241768|dbj|BAD36778.1| porphobilinogen deaminase [Homo sapiens] Length = 157 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 41/83 (49%) Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+G C Sbjct: 1 ILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSVP 60 Query: 248 IAGFAYCKGSTLYFYGIVLASDG 270 +A K LY G V + DG Sbjct: 61 VAVHTAMKDGQLYLTGGVWSLDG 83 >gi|167949214|ref|ZP_02536288.1| porphobilinogen deaminase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 136 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 5/93 (5%) Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG+KRL E+ I + E P+ GQGAI IE ++ + L+ ++H DT V+ E Sbjct: 8 AGLKRLGFEQRITAFIAPEQSLPAIGQGAIGIECRSDDAQVNALIAPLHHVDTAACVHAE 67 Query: 234 RAFLAELDGS-----CKSAIAGFAYCKGSTLYF 261 RA L G C+ AG G +++ Sbjct: 68 RAMNNRLMGGSPCADCRLRDAGVPATSGCVVWW 100 >gi|330937205|gb|EGH41226.1| porphobilinogen deaminase [Pseudomonas syringae pv. pisi str. 1704B] Length = 119 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 46/98 (46%) Query: 199 GQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST 258 GQGA+ IE + + L+ ++HEDT V ER+ L+G C+ IA +A +G Sbjct: 3 GQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHLNGGCQVPIACYAVLEGDD 62 Query: 259 LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 ++ G+V G + + A +G A+ + Sbjct: 63 VWLRGLVGDPSGSVLLHADARAPQTSAQALGVQVAEAL 100 >gi|18140915|gb|AAL60466.1|AF411692_1 antithrombin [Chelydra serpentina] Length = 453 Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 12/143 (8%) Query: 33 IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLL 92 IP ++ ++ L KGD IT + G L +E+E+ L ++ + S K+ Sbjct: 284 IPSDHVQVVELPYKGDDITMVLILPTMGTSL--KEVEQDLTLEQLQSWLGSMKE------ 335 Query: 93 KGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRG 152 + +S YLPR I D F T + L+D+ L + S + + R+D+ V D Sbjct: 336 --ISLSIYLPRFRIEDNF--STKKKLRDMGLVDLFSPESAKLPGIAAEGRTDLYVSDAFH 391 Query: 153 KIETRLNKLNNNKAHAILLAYAG 175 K +N+ + A + ++ +G Sbjct: 392 KAFLEVNEEGSEAAASTVVMISG 414 >gi|3668361|gb|AAC61857.1| porphobilinogen deaminase [Prosthecochloris vibrioformis] Length = 43 Score = 42.4 bits (98), Expect = 0.097, Method: Composition-based stats. Identities = 20/42 (47%), Positives = 30/42 (71%) Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEID 78 NI + + T GD + + L++IG GLFT++IEK L++GEID Sbjct: 2 NISLKLVKTTGDVLLDSPLSKIGDMGLFTKDIEKHLLAGEID 43 >gi|294637951|ref|ZP_06716219.1| porphobilinogen deaminase protein [Edwardsiella tarda ATCC 23685] gi|291088912|gb|EFE21473.1| porphobilinogen deaminase protein [Edwardsiella tarda ATCC 23685] Length = 94 Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 34/73 (46%) Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 +NHE T V+ ERA L+G C+ I +A G L+ +V DG + R G Sbjct: 2 LNHESTALRVSAERAMNMRLEGGCQVPIGSYAEIDGDQLWLRALVGRPDGSLIIRGERRG 61 Query: 281 NRCDAINIGRDAA 293 A ++G D A Sbjct: 62 PLHQAESMGIDLA 74 >gi|54310581|ref|YP_131601.1| hypothetical protein PBPRA3528 [Photobacterium profundum SS9] gi|46915024|emb|CAG21799.1| hypothetical protein PBPRA3528 [Photobacterium profundum SS9] Length = 104 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 21/98 (21%), Positives = 42/98 (42%) Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS 268 +++ + + L+ +NH +T + CERA L G C+ I ++ +G ++ +V Sbjct: 1 MDDQRVRALLAPLNHHETATRIFCERAMNNRLQGGCQVPIGSYSELQGDQIWLRALVGEP 60 Query: 269 DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 DG G D +G A+ + K + + Sbjct: 61 DGSKMVRGEITGPAIDGEALGTQLAEQLLADGAKEILD 98 >gi|313896589|ref|ZP_07830138.1| porphobilinogen deaminase C-terminal domain protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312974774|gb|EFR40240.1| porphobilinogen deaminase C-terminal domain protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 120 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 1/111 (0%) Query: 196 PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA-YC 254 P+ GQGA+ IE ++ + + + D + ERAFL ++G C+ + +A Sbjct: 3 PAVGQGALAIECRADDAEICAAIGFMCDADMTAAAAAERAFLGRVEGGCQIPVGVYAEIG 62 Query: 255 KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 G LY ++ + DG +G A IG A+ + + + + Sbjct: 63 DGDMLYVDAMIASVDGMRVCRSRASGRPAQAAQIGVALAEELLDMGGREIL 113 >gi|291080775|ref|ZP_06535168.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 47 Score = 39.3 bits (90), Expect = 0.80, Method: Composition-based stats. Identities = 16/39 (41%), Positives = 26/39 (66%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKL 72 P + ++P+ T+GD I + L ++GGKGLF +E+E L Sbjct: 5 PGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIAL 43 >gi|281415815|ref|ZP_06247557.1| hydroxymethylbilane synthase [Micrococcus luteus NCTC 2665] Length = 71 Score = 39.3 bits (90), Expect = 0.83, Method: Composition-based stats. Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 16/79 (20%) Query: 5 PFRIGTRCSPLA------LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 P RIGTR S LA +A A RS L H +V+I T+GD +T +L + Sbjct: 3 PLRIGTRGSALATTQTSHVAEALTARSGL-------AHELVVI--RTEGD-VTTGSLASL 52 Query: 59 GGKGLFTEEIEKKLISGEI 77 GG G+F + ++ G + Sbjct: 53 GGTGVFASALRAAVLDGVV 71 >gi|113707391|gb|ABI36594.1| hydroxymethylbilane synthase [Homo sapiens] Length = 87 Score = 38.9 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 33/70 (47%) Query: 201 GAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY 260 GA+ +E + +LV V++ +T ERAFL L+G C +A K LY Sbjct: 1 GALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSVPVAVHTAMKDGQLY 60 Query: 261 FYGIVLASDG 270 G V + DG Sbjct: 61 LTGGVWSLDG 70 >gi|58698960|ref|ZP_00373817.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila ananassae] gi|58534526|gb|EAL58668.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila ananassae] Length = 62 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57 +IGTR S LA+ A E + L+D P +I I+ + + GD+ N L E Sbjct: 14 KIGTRGSKLAVVQALEAKQKLLD--SFPNLSIEIVKIKSSGDKYANANLAE 62 >gi|266622117|ref|ZP_06115052.1| putative porphobilinogen deaminase [Clostridium hathewayi DSM 13479] gi|288866173|gb|EFC98471.1| putative porphobilinogen deaminase [Clostridium hathewayi DSM 13479] Length = 121 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Query: 192 EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGF 251 E F P+ GQG + +E + + + E+ I ED + ER L LD C + + Sbjct: 19 EAFIPAGGQGILAVEGRIED-RICEMAVRIQDEDAKTCLMLERKILKLLDAGCHEPVGVY 77 Query: 252 AYCKGSTLYFYGI 264 + +G + +GI Sbjct: 78 SRIRGEEIEVFGI 90 >gi|238917296|ref|YP_002930813.1| hypothetical protein EUBELI_01371 [Eubacterium eligens ATCC 27750] gi|238872656|gb|ACR72366.1| Hypothetical protein EUBELI_01371 [Eubacterium eligens ATCC 27750] Length = 287 Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 14/166 (8%) Query: 52 NRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDM------PTKLLKGLQISAYLPRED 105 N EIGG ++ + LI ID + + + +L G+ IS + R D Sbjct: 37 NLDTVEIGGSDIYPAL--EALIDDNIDMVLVDMRMLVEMEKSGQQLDDGIVISGVIKRRD 94 Query: 106 IRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK 165 R V I + KD+ ++V+ T S A++ ++ + I+ ++KL++ + Sbjct: 95 PRYVMIRR--RGTKDVVENAVVVTDSDENAAVICEMYDNVECV-VENNIKDCMSKLDSEE 151 Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFP---PSPGQGAICIETH 208 A+ Y I+ + +K + DF P GQG CI T+ Sbjct: 152 CDAVFAFYDDIRIARLYNGLKYKYTLMDFSDCVPPHGQGIYCILTN 197 >gi|77176670|gb|ABA64453.1| hydroxymethylbilane synthase [Sus scrofa] Length = 33 Score = 37.0 bits (84), Expect = 3.6, Method: Composition-based stats. Identities = 17/33 (51%), Positives = 21/33 (63%) Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGL 95 LFT+E+E L E+D VHS KD+PT L G Sbjct: 1 LFTKELEHALERNEVDLVVHSLKDLPTVLPPGF 33 >gi|237738437|ref|ZP_04568918.1| alanyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817] gi|229420317|gb|EEO35364.1| alanyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817] Length = 371 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 36/146 (24%) Query: 100 YLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDF--------- 150 Y+ +EDI HTAQ + S I + + + R + + +D Sbjct: 70 YIRQEDIA---CQHTAQHM-----FSAIAYNDYKLNTVGFRMAEEYTTVDLDSNEITEEV 121 Query: 151 ------------RGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSP 198 + I+ ++ +NN +A I G+++ KEKV+ ++ +E P Sbjct: 122 IEELERKANEVIKKAIQLKIFIMNNEEARKI----EGLRKAIKEKVVGDVRFVE--IPGV 175 Query: 199 GQGAICIETHVNNPKAQELVKVINHE 224 GA C HV N K +L K+INHE Sbjct: 176 DLGA-CAGFHVENTKDIQLFKIINHE 200 >gi|186475304|ref|YP_001856774.1| 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia phymatum STM815] gi|226724267|sp|B2JDV2|KDSB_BURP8 RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase; AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid synthase; Short=CKS; Short=CMP-KDO synthase gi|184191763|gb|ACC69728.1| 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia phymatum STM815] Length = 267 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 20/124 (16%) Query: 29 DVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMP 88 D PP I ++P R+ N+ L +IGGK + E+ + SG Sbjct: 3 DTQHTPPF-IAVVPARLASTRLPNKPLADIGGKPMVVRVAERAVESG------------- 48 Query: 89 TKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVI 148 Q+ + + DV +H ++ A H GT L A WR D+ V+ Sbjct: 49 -----AQQVLIATDAQAVFDVARAHGIDAMMTRADHPS-GTDRLAEVAAHYGWRDDMIVV 102 Query: 149 DFRG 152 + +G Sbjct: 103 NVQG 106 >gi|14141700|gb|AAK54358.1|AF213017_10 CinH resolvase [Acinetobacter calcoaceticus] gi|24411191|emb|CAC80898.1| CinH resolvase [Acinetobacter sp. ED23-35] gi|30172185|emb|CAD31052.1| site-specific CinH resolvase [Acinetobacter sp. ED45-25] gi|30502914|emb|CAD31737.1| site-specific resolvase CinH [Acinetobacter sp. LS56-7] Length = 188 Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 58/107 (54%), Gaps = 9/107 (8%) Query: 71 KLISGEIDCAVHSAKDMPTKLLKGLQ--ISAYLPREDIRDVFISHTAQS--LKDLALHSV 126 ++I +D S KD+ T++ K ++ I+ +E+I + TAQS + +L L + Sbjct: 57 RVIVHSMDRFARSLKDLVTEVDKLVKRGIAIQFVKENI-----TFTAQSTPMDNLMLQLM 111 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173 + R+ +L R + I + +GK + R++KLN ++A A+L A+ Sbjct: 112 GAFAQFEREIILERQKEGIKIAAAQGKYKGRVHKLNPDQAKALLQAW 158 >gi|312886729|ref|ZP_07746336.1| acriflavin resistance protein [Mucilaginibacter paludis DSM 18603] gi|311300831|gb|EFQ77893.1| acriflavin resistance protein [Mucilaginibacter paludis DSM 18603] Length = 440 Score = 35.8 bits (81), Expect = 8.2, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 17/132 (12%) Query: 26 SLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK---GLFTEEIEKKLISGEI----- 77 SL DV IP I +P+ +I + ++GG G+F + E + + G + Sbjct: 253 SLTDVENIPVGVINTVPV-----KIKDVATVQMGGDERLGIFDQNGEGEAVGGIVVMRYG 307 Query: 78 ---DCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRR 134 D +H+ KD + KGL R I + +S+K + +I T S+ Sbjct: 308 ENADKVIHAVKDKMNDIQKGLPAGVSFKIAYDRSELIENAVKSVKHTLIEEMI-TVSIIV 366 Query: 135 KALLLRWRSDIS 146 L WRS +S Sbjct: 367 ILFLFSWRSALS 378 >gi|94468604|gb|ABF18151.1| hydroxymethylbilane synthase-like protein [Aedes aegypti] Length = 349 Score = 35.8 bits (81), Expect = 9.2, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 6/96 (6%) Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 EK I +++ + + GQGA+ +E N+ ++ + H +T + ER+FL L Sbjct: 4 EKRIDQVIEPSEILYAVGQGALAVECRSNDEYILNMLSKLCHLETQCKILVERSFLKTLG 63 Query: 242 GSCKSAIAGFAY------CKGSTLYFYGIVLASDGK 271 G C + +A K + L G V + DGK Sbjct: 64 GGCSAPVAVCTSLKRKHDSKSNYLNIQGAVWSLDGK 99 Searching..................................................done Results from round 2 >gi|90414241|ref|ZP_01222221.1| porphobilinogen deaminase [Photobacterium profundum 3TCK] gi|90324688|gb|EAS41229.1| porphobilinogen deaminase [Photobacterium profundum 3TCK] Length = 341 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 108/306 (35%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M KP RI TR SPLA+ A ++ L H P + ++P+ TKGD I + L ++GG Sbjct: 32 MTDKPIRIATRKSPLAMWQAEFVQAELEKAH--PGLVVELVPMVTKGDIILDTPLAKVGG 89 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+T S+ + Sbjct: 90 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNTYNSIAE 149 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+ RL+ Sbjct: 150 LPAGSIVGTSSLRRQCQLRAQRPDLIINDLRGNVNTRLRKLDEGQYDAIILACAGLMRLE 209 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ + E+ P+ GQGA+ IE +++ + + L+ +NH +T + CERA L Sbjct: 210 MHDRIRSAIEPEESLPAVGQGAVGIECRLDDHRVRALLATLNHPETATRIFCERAMNNHL 269 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I ++ +G ++ +V DG G D +G A+ + Sbjct: 270 QGGCQVPIGSYSELQGDQIWLRALVGEPDGSKMVRGEITGAAIDGEALGTQLAEQLLADG 329 Query: 301 NKNVFN 306 K + + Sbjct: 330 AKEILD 335 >gi|209693832|ref|YP_002261760.1| porphobilinogen deaminase [Aliivibrio salmonicida LFI1238] gi|226706282|sp|B6EPK1|HEM3_ALISL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|208007783|emb|CAQ77905.1| porphobilinogen deaminase HemC [Aliivibrio salmonicida LFI1238] Length = 311 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 110/307 (35%), Positives = 168/307 (54%), Gaps = 3/307 (0%) Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M ++ P RI TR SPLAL A + +L H P + ++ + TKGD I + L +IG Sbjct: 1 MSQQLPVRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E ++ G D AVHS KD+P + +GL + R D RD F+S+T ++ Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVEFPEGLGLVTICERGDPRDAFVSNTYNNID 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L + +GT SLRR+ L +R D+ + + RG + TRL KL++ AI+LA AG+ RL Sbjct: 119 ELPQGATVGTCSLRRQCQLKEYRPDLIIKELRGNVGTRLQKLDDGNYDAIILACAGLIRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E IK + E P+ GQGA+ IET +N+ + + L+ +NH +T V CERA Sbjct: 179 GLEDRIKSSIEPEQSLPAVGQGAVGIETRLNDDRIRALLAPLNHPETAHRVLCERAMNNR 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I ++ G ++ +V DG I G DA +G A+ + Sbjct: 239 LEGGCQVPIGSYSLIDGDQIWLRALVGEPDGSIMVRGETTGPVSDAEELGTKLAEQLLND 298 Query: 300 SNKNVFN 306 K++ + Sbjct: 299 GAKDILD 305 >gi|330444901|ref|ZP_08308556.1| porphobilinogen deaminase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489211|dbj|GAA03053.1| porphobilinogen deaminase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 310 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 108/306 (35%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +P RI TR SPLA+ A ++ L H P + ++P+ TKGD I + L ++GG Sbjct: 1 MTSQPIRIATRKSPLAMWQAEFVKAELEQAH--PGIVVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ ++ + Sbjct: 59 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNKYNNIDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ + R D+ V D RG + TRL KL++ + AI+LA AG+KRLK Sbjct: 119 LPQGAIVGTSSLRRQCQIRAQRPDLIVNDLRGNVNTRLRKLDDGEYDAIILACAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ + E P+ GQGA+ IE +++ + ++L+ +NH+ T V CERA L Sbjct: 179 MDDRIRSEIAPETSLPAVGQGAVGIECRLDDTRVRQLLDALNHQPTATRVLCERAMNNRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ +V DG G A +G A + Sbjct: 239 QGGCQVPIGSYALLEGDEIWLRALVGEPDGSKIVRAEIRGPIAQAEQLGTTLADQLLADG 298 Query: 301 NKNVFN 306 K++ + Sbjct: 299 AKDILD 304 >gi|21957067|gb|AAM83970.1|AE013638_8 porphobilinogen deaminase; hydroxymethylbilane synthase [Yersinia pestis KIM 10] gi|45437816|gb|AAS63365.1| porphobilinogen deaminase [Yersinia pestis biovar Microtus str. 91001] Length = 369 Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 117/305 (38%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG Sbjct: 57 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 114 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D Sbjct: 115 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDD 174 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL Sbjct: 175 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 234 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L Sbjct: 235 LENRIRYAMSAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRL 294 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G TL+ +V A DG R G +A +G + A + Sbjct: 295 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELADELLSRG 354 Query: 301 NKNVF 305 + + Sbjct: 355 AREIL 359 >gi|261210172|ref|ZP_05924469.1| porphobilinogen deaminase [Vibrio sp. RC341] gi|260840712|gb|EEX67261.1| porphobilinogen deaminase [Vibrio sp. RC341] Length = 311 Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + D Sbjct: 59 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYAKIDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL Sbjct: 119 LPSGAVVGTCSLRRQCQLKSARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L Sbjct: 179 LESRIRNFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ +V DG G R +A +G A+ + Sbjct: 239 QGGCQVPIGSYALLEGDHIWLRALVGEPDGSQIVRGEIRGPRSEAEQLGITLAEQLLEQG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKEILD 304 >gi|109896672|ref|YP_659927.1| porphobilinogen deaminase [Pseudoalteromonas atlantica T6c] gi|123065108|sp|Q15Z15|HEM3_PSEA6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|109698953|gb|ABG38873.1| hydroxymethylbilane synthase [Pseudoalteromonas atlantica T6c] Length = 309 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 176/306 (57%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LA+ A ++ L++ H P + ++P+ST+GDRI + L +IGG Sbjct: 1 MSDRVIRIATRKSALAMWQAEYVQAKLLEAH--PQLKVELVPMSTQGDRILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E + G D AVHS KD+P G + RE+ D F+S+T S+++ Sbjct: 59 KGLFIKELEVAMSEGRADIAVHSMKDVPVDFPAGFGLHCICERENPYDAFVSNTYASIEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ + R D+++ D RG + TRL KL++ + AI+LA AG+ RL+ Sbjct: 119 LPQGAIVGTSSLRRQCQIRSARPDLTIRDLRGNVNTRLAKLDDGQYDAIILAAAGLIRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + IK + P+ GQGA+ IE ++ + EL+K +NH DT V ERA A+L Sbjct: 179 MQDRIKTYIEPTVSLPAVGQGAVGIECRNDDAELIELLKPLNHSDTESRVKAERAMNAKL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G LY G+V + DG + + + GN DA++IG D A+ + Sbjct: 239 NGGCQVPIGSYAVLNGDELYLRGLVGSPDGSVLLQAEKRGNVNDALSIGVDVAEQLLEKG 298 Query: 301 NKNVFN 306 ++ Sbjct: 299 AGDILQ 304 >gi|294142612|ref|YP_003558590.1| porphobilinogen deaminase [Shewanella violacea DSS12] gi|293329081|dbj|BAJ03812.1| porphobilinogen deaminase [Shewanella violacea DSS12] Length = 309 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 116/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLAL A ++ L H P + ++P+STKGD I + L ++GG Sbjct: 1 MSQNVIRIATRKSPLALWQAEFVKAELEKFH--PGLTVELLPMSTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+ +S+ D Sbjct: 59 KGLFVKELEIAMLDGRADIAVHSIKDVPVDFPDGLGLEVICEREDPRDAFVSNDYKSIDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK Sbjct: 119 LPKGAVVGTSSLRRQCQIRAMRPDLKITDLRGNVGTRLGKLDAGNYDAIILAAAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I ++ E+ P+ GQGA+ IE ++ + + L+ + H +T V ERA L Sbjct: 179 LEERISSFISAEESLPANGQGAVGIECRTDDERVKALLAPLEHTETRYRVTAERAMNTHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I FA +G TL G+V DG + G + DA IG A+ + Sbjct: 239 QGGCQVPIGAFAEIQGDTLTLRGLVGNPDGSKIITGTSVGPKTDAKAIGITLAKELLSKG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKEILD 304 >gi|90581042|ref|ZP_01236842.1| porphobilinogen deaminase [Vibrio angustum S14] gi|90437738|gb|EAS62929.1| porphobilinogen deaminase [Vibrio angustum S14] Length = 310 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 106/306 (34%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +P RI TR SPLA+ A ++ L H P + ++P+ TKGD I + L ++GG Sbjct: 1 MSNQPIRIATRKSPLAMWQAEFVKAELEQAH--PGIIVELVPMITKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ ++ + Sbjct: 59 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNKYNNIDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ V D RG + TRL K++ + AI+LA AG+KRLK Sbjct: 119 LPQGAIVGTSSLRRQCQLRAQRPDLIVNDLRGNVNTRLRKMDEGQYDAIILACAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE +++ + ++L+ ++ + T V CERA L Sbjct: 179 MEDRIRSEIAPEVSLPAVGQGAVGIECRLDDTRVRQLLAALSDQATTTRVLCERAMNNYL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ +V DG G A +G A+ + Sbjct: 239 QGGCQVPIGSYAELEGDQIWLRALVGEPDGSKIVRAEIRGPIEQAEQLGETLAEQLLNDG 298 Query: 301 NKNVFN 306 +++ + Sbjct: 299 ARDILD 304 >gi|148978777|ref|ZP_01815157.1| porphobilinogen deaminase [Vibrionales bacterium SWAT-3] gi|145962198|gb|EDK27482.1| porphobilinogen deaminase [Vibrionales bacterium SWAT-3] Length = 326 Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 111/301 (36%), Positives = 172/301 (57%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++GGKGLF Sbjct: 20 PIRIATRKSPLALWQAYFVRDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGKGLF 77 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L Sbjct: 78 VKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQG 137 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GT SLRR+ LL +R D+ + + RG + TRL KL++ + AI+LA AG+KRL+ E+ Sbjct: 138 AVVGTCSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRLELEER 197 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+G C Sbjct: 198 IRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHQDTADRVLCERAMNLTLEGGC 257 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I ++ G ++ +V DG +G R DA +G A + + + Sbjct: 258 QVPIGSYSLLDGDNIWLRALVGEPDGSKMVRGEISGPRKDAEALGVTLANQLLDDGAREI 317 Query: 305 F 305 Sbjct: 318 L 318 >gi|149191476|ref|ZP_01869725.1| porphobilinogen deaminase [Vibrio shilonii AK1] gi|148834664|gb|EDL51652.1| porphobilinogen deaminase [Vibrio shilonii AK1] Length = 329 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 170/305 (55%), Gaps = 2/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +P RI TR SPLAL A + +L+ H P + ++ + TKGD I + L ++GGK Sbjct: 20 QTQPIRIATRKSPLALWQAHYVKDALIAAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 77 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L Sbjct: 78 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYTNISEL 137 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ L R D+ + + RG + TRL KL+N + AI+LA AG+KRL+ Sbjct: 138 PQGAVVGTCSLRRQCQLKEQRPDLVIKELRGNVGTRLGKLDNGEYDAIILAAAGLKRLEL 197 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I+ + E+ P+ GQGA+ IE +++ + +L++ +NH +T D V CERA L+ Sbjct: 198 ESRIRSFIEPEESLPAVGQGAVGIECRLDDERLIKLLEPLNHTNTADRVLCERAMNLTLE 257 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I ++ G ++ +V DG G R DA +G A + Sbjct: 258 GGCQVPIGSYSLIDGDEIWLRALVGEPDGSKIVRGEIRGKRADAEALGVQLANQLLNDGA 317 Query: 302 KNVFN 306 K + Sbjct: 318 KEILE 322 >gi|308051395|ref|YP_003914961.1| porphobilinogen deaminase [Ferrimonas balearica DSM 9799] gi|307633585|gb|ADN77887.1| porphobilinogen deaminase [Ferrimonas balearica DSM 9799] Length = 310 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 176/305 (57%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K RI TR SPLAL A ++ L H P + ++ +STKGDRI + L ++GG Sbjct: 1 MARKEIRIATRKSPLALWQAEFVKAELEKAH--PGLTVTLLKMSTKGDRILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E +++GE D AVHS KD+P + +GL ++ RED RD F+S+T ++L D Sbjct: 59 KGLFVKELEVAMLNGEADIAVHSMKDVPVEFPEGLGLAVICDREDPRDAFVSNTYKNLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++G+SSLRR+ L R D+ V D RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 119 LPHGAIVGSSSLRRQCQLRAMRPDLDVRDLRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I + E P+ GQGA+ IE +++ + L+ V+NH T V ERA L Sbjct: 179 LEERITAFIEPEQSLPANGQGAVGIECRLDDAELLALIGVLNHAPTHARVIAERAMNTHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I ++ +G TL+ G+V DG + G DA +G + A+ + Sbjct: 239 EGGCQVPIGAYSVIEGDTLWLRGLVGDPDGSKIIQDELRGPVADAQKLGIELAERLLAQG 298 Query: 301 NKNVF 305 + Sbjct: 299 AGEIL 303 >gi|320154944|ref|YP_004187323.1| porphobilinogen deaminase [Vibrio vulnificus MO6-24/O] gi|319930256|gb|ADV85120.1| porphobilinogen deaminase [Vibrio vulnificus MO6-24/O] Length = 312 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 110/301 (36%), Positives = 167/301 (55%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++GGKGLF Sbjct: 6 PIRIATRKSPLALWQAYYVKDALQKAH--PGLEVELVTMVTKGDVILDTPLAKVGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + +L Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHHVDELPQG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GT SLRR+ L +R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ E+ Sbjct: 124 AVVGTCSLRRQCQLKAYRPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELEER 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + E P+ GQGA+ IE N+ + +L++ +NH DT D V CERA L+G C Sbjct: 184 IRSFIEPEQSLPAVGQGAVGIECRTNDERILKLLEPLNHTDTADRVKCERAMNLTLEGGC 243 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I +A +G ++ +V DG G R A +G A + + + Sbjct: 244 QVPIGSYALLEGDEIWLRALVGEPDGSEIVRGEIRGPRAQAEQLGVQLANQLLDEGAREI 303 Query: 305 F 305 Sbjct: 304 L 304 >gi|261250035|ref|ZP_05942612.1| porphobilinogen deaminase [Vibrio orientalis CIP 102891] gi|260939539|gb|EEX95524.1| porphobilinogen deaminase [Vibrio orientalis CIP 102891] Length = 312 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 109/304 (35%), Positives = 172/304 (56%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QSTPIRIATRKSPLALWQAHFVKDALKAAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHNIDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +++GT SLRR+ L +R D+ + + RG + TRL KL++ + AI+LA AG+KRL+ Sbjct: 121 PQGAIVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDDGQYDAIILAAAGLKRLEL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ IK + E P+ GQGA+ IE +++ + +L++ +NH++T D V CERA L+ Sbjct: 181 EERIKSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKETADRVLCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I ++ G ++ +V DG G+R DA +G + A + Sbjct: 241 GGCQVPIGSYSLIDGDNIWLRALVGEPDGSKIIRGEIRGSRADAETLGVELANQLLDDGA 300 Query: 302 KNVF 305 K + Sbjct: 301 KEIL 304 >gi|27364543|ref|NP_760071.1| porphobilinogen deaminase [Vibrio vulnificus CMCP6] gi|37678265|ref|NP_932874.1| porphobilinogen deaminase [Vibrio vulnificus YJ016] gi|33301181|sp|Q8DD85|HEM3_VIBVU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|55976475|sp|Q7MQC7|HEM3_VIBVY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|27360662|gb|AAO09598.1| porphobilinogen deaminase [Vibrio vulnificus CMCP6] gi|37197004|dbj|BAC92845.1| porphobilinogen deaminase [Vibrio vulnificus YJ016] Length = 312 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 110/301 (36%), Positives = 167/301 (55%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++GGKGLF Sbjct: 6 PIRIATRKSPLALWQAYYVKDALQKAH--PGLEVELVTMVTKGDVILDTPLAKVGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + +L Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHHVDELPQG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GT SLRR+ L +R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ E+ Sbjct: 124 AVVGTCSLRRQCQLKAYRPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELEER 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + E P+ GQGA+ IE N+ + +L++ +NH DT D V CERA L+G C Sbjct: 184 IRSFIEPEQSLPAVGQGAVGIECRTNDERILKLLEPLNHADTADRVKCERAMNLTLEGGC 243 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I +A +G ++ +V DG G R A +G A + + + Sbjct: 244 QVPIGSYALLEGDEIWLRALVGEPDGSEIVRGEIRGPRAQAEQLGVQLANQLLDEGAREI 303 Query: 305 F 305 Sbjct: 304 L 304 >gi|262172879|ref|ZP_06040557.1| porphobilinogen deaminase [Vibrio mimicus MB-451] gi|261893955|gb|EEY39941.1| porphobilinogen deaminase [Vibrio mimicus MB-451] Length = 311 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLKVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P KGL + RED RD F+S+T + D Sbjct: 59 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPKGLGLVTICEREDPRDAFVSNTYAKIDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL Sbjct: 119 LPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L Sbjct: 179 LESRIRNFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A G ++ +V DG G R +A +G A+ + Sbjct: 239 QGGCQVPIGSYALLDGDEIWLRALVGEPDGSQIVRGEIRGPRSEAEQLGITLAEQLLGQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|229525016|ref|ZP_04414421.1| porphobilinogen deaminase [Vibrio cholerae bv. albensis VL426] gi|229338597|gb|EEO03614.1| porphobilinogen deaminase [Vibrio cholerae bv. albensis VL426] Length = 317 Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G+T++ +V DG G R A +G A+ + Sbjct: 245 QGGCQVPIGSYALLEGNTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304 Query: 301 NKNVFN 306 K + Sbjct: 305 AKEILE 310 >gi|322834934|ref|YP_004214961.1| porphobilinogen deaminase [Rahnella sp. Y9602] gi|321170135|gb|ADW75834.1| porphobilinogen deaminase [Rahnella sp. Y9602] Length = 313 Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 118/305 (38%), Positives = 171/305 (56%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A +S LM H P + ++P+ TKGD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAQYVQSRLMACH--PGLQVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ SL D Sbjct: 59 KGLFVKELELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQYASLAD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L + R D+ + D RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPQGSIVGTSSLRRQCQLRQKRPDLMIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I L E+ P+ GQGA+ IE +++ ++L+ + H +T V ERA L Sbjct: 179 LENRITYALTPEECLPAVGQGAVGIECRLDDQTTRDLLAPLAHRETTLRVQAERAMNMRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G L+ +V A DG R G +A +G D A+ + Sbjct: 239 EGGCQVPIGSYAELEGDELWLRALVGAPDGSQMVCGERRGPAANAHRMGVDLAEELLANG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|332304814|ref|YP_004432665.1| porphobilinogen deaminase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172143|gb|AEE21397.1| porphobilinogen deaminase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 309 Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 174/306 (56%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LA+ A ++ L++ H P + ++P+ST+GDRI + L +IGG Sbjct: 1 MSDRVIRIATRKSTLAMWQAEYVQAKLLEAH--PQLKVELVPMSTQGDRILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E + G D AVHS KD+P G + RE+ D F+S+T ++++ Sbjct: 59 KGLFIKELEIAMSEGRADIAVHSMKDVPVDFPDGFGLHCICERENPYDAFVSNTYSAIEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+++ D RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPQGAVVGTSSLRRQCQIRSARPDLTIRDLRGNVNTRLAKLDEGQYDAIILAAAGLIRLN 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ IK + P+ GQGA+ IE ++ + EL+K +NH DT V ERA A+L Sbjct: 179 MQERIKAYIEPTVSLPAVGQGAVGIECRNDDAELIELLKPLNHADTESRVKAERAMNAKL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G LY G+V + DG + + + G+ DA +IG D A+ + Sbjct: 239 NGGCQVPIGSYAVLNGDELYLRGLVGSPDGSLLLQAEKRGSINDAQSIGIDVAEQLLEKG 298 Query: 301 NKNVFN 306 ++ Sbjct: 299 AGDILQ 304 >gi|15640152|ref|NP_229779.1| porphobilinogen deaminase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587718|ref|ZP_01677479.1| porphobilinogen deaminase [Vibrio cholerae 2740-80] gi|121728303|ref|ZP_01681334.1| porphobilinogen deaminase [Vibrio cholerae V52] gi|147675270|ref|YP_001218298.1| porphobilinogen deaminase [Vibrio cholerae O395] gi|153818935|ref|ZP_01971602.1| porphobilinogen deaminase [Vibrio cholerae NCTC 8457] gi|153822325|ref|ZP_01974992.1| porphobilinogen deaminase [Vibrio cholerae B33] gi|227080356|ref|YP_002808907.1| porphobilinogen deaminase [Vibrio cholerae M66-2] gi|229508398|ref|ZP_04397902.1| porphobilinogen deaminase [Vibrio cholerae BX 330286] gi|229508921|ref|ZP_04398411.1| porphobilinogen deaminase [Vibrio cholerae B33] gi|229517035|ref|ZP_04406481.1| porphobilinogen deaminase [Vibrio cholerae RC9] gi|229606671|ref|YP_002877319.1| porphobilinogen deaminase [Vibrio cholerae MJ-1236] gi|254851504|ref|ZP_05240854.1| porphobilinogen deaminase [Vibrio cholerae MO10] gi|298501111|ref|ZP_07010911.1| porphobilinogen deaminase [Vibrio cholerae MAK 757] gi|9654520|gb|AAF93298.1| porphobilinogen deaminase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548017|gb|EAX58095.1| porphobilinogen deaminase [Vibrio cholerae 2740-80] gi|121629433|gb|EAX61862.1| porphobilinogen deaminase [Vibrio cholerae V52] gi|126510497|gb|EAZ73091.1| porphobilinogen deaminase [Vibrio cholerae NCTC 8457] gi|126520151|gb|EAZ77374.1| porphobilinogen deaminase [Vibrio cholerae B33] gi|146317153|gb|ABQ21692.1| porphobilinogen deaminase [Vibrio cholerae O395] gi|227008244|gb|ACP04456.1| porphobilinogen deaminase [Vibrio cholerae M66-2] gi|227011878|gb|ACP08088.1| porphobilinogen deaminase [Vibrio cholerae O395] gi|229346098|gb|EEO11070.1| porphobilinogen deaminase [Vibrio cholerae RC9] gi|229354038|gb|EEO18971.1| porphobilinogen deaminase [Vibrio cholerae B33] gi|229354671|gb|EEO19593.1| porphobilinogen deaminase [Vibrio cholerae BX 330286] gi|229369326|gb|ACQ59749.1| porphobilinogen deaminase [Vibrio cholerae MJ-1236] gi|254847209|gb|EET25623.1| porphobilinogen deaminase [Vibrio cholerae MO10] gi|297540145|gb|EFH76206.1| porphobilinogen deaminase [Vibrio cholerae MAK 757] Length = 317 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G T++ +V DG G R A +G A+ + Sbjct: 245 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304 Query: 301 NKNVFN 306 K + Sbjct: 305 AKEILE 310 >gi|229515846|ref|ZP_04405304.1| porphobilinogen deaminase [Vibrio cholerae TMA 21] gi|229527138|ref|ZP_04416532.1| porphobilinogen deaminase [Vibrio cholerae 12129(1)] gi|229335369|gb|EEO00852.1| porphobilinogen deaminase [Vibrio cholerae 12129(1)] gi|229347109|gb|EEO12070.1| porphobilinogen deaminase [Vibrio cholerae TMA 21] Length = 317 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G T++ +V DG G R A +G A+ + Sbjct: 245 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304 Query: 301 NKNVFN 306 K + Sbjct: 305 AKEILE 310 >gi|153803403|ref|ZP_01957989.1| porphobilinogen deaminase [Vibrio cholerae MZO-3] gi|124121060|gb|EAY39803.1| porphobilinogen deaminase [Vibrio cholerae MZO-3] Length = 311 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G+T++ +V DG G R A +G A+ + Sbjct: 239 QGGCQVPIGSYALLEGNTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|153214841|ref|ZP_01949649.1| porphobilinogen deaminase [Vibrio cholerae 1587] gi|153830620|ref|ZP_01983287.1| porphobilinogen deaminase [Vibrio cholerae 623-39] gi|124115084|gb|EAY33904.1| porphobilinogen deaminase [Vibrio cholerae 1587] gi|148873892|gb|EDL72027.1| porphobilinogen deaminase [Vibrio cholerae 623-39] Length = 311 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G+T++ +V DG G R A +G A+ + Sbjct: 239 QGGCQVPIGSYALLEGNTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|258623142|ref|ZP_05718154.1| porphobilinogen deaminase [Vibrio mimicus VM573] gi|258584625|gb|EEW09362.1| porphobilinogen deaminase [Vibrio mimicus VM573] Length = 326 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 16 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLKVELVTMVTRGDVILDTPLAKVGG 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + D Sbjct: 74 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTYAKIDD 133 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 134 LPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 193 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L Sbjct: 194 LESRIRSFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTL 253 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A G ++ +V DG G R +A +G A+ + Sbjct: 254 QGGCQVPIGSYALLDGDEIWLRALVGEPDGSQIVRGEIRGPRSEAEQLGITLAEQLLGQG 313 Query: 301 NKNVFN 306 K + Sbjct: 314 AKEILE 319 >gi|59710673|ref|YP_203449.1| porphobilinogen deaminase [Vibrio fischeri ES114] gi|197333951|ref|YP_002154835.1| porphobilinogen deaminase [Vibrio fischeri MJ11] gi|75431912|sp|Q5E8T5|HEM3_VIBF1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226706298|sp|B5FF97|HEM3_VIBFM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|59478774|gb|AAW84561.1| hydroxymethylbilane synthase [Vibrio fischeri ES114] gi|197315441|gb|ACH64888.1| porphobilinogen deaminase [Vibrio fischeri MJ11] Length = 311 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 108/307 (35%), Positives = 168/307 (54%), Gaps = 3/307 (0%) Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M ++ P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++G Sbjct: 1 MSQQLPVRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+T ++ Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNTYNNID 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +V+GT SLRR+ L R D+ + + RG + TRL KL++ AI+LA AG+ RL Sbjct: 119 ELPQGAVVGTCSLRRQCQLKEARPDLIIKELRGNVGTRLQKLDDGNYDAIILACAGLIRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E IK + E P+ GQGA+ IE +++ + + L++ +NH +T + V CERA Sbjct: 179 GLEDRIKSAIEPEQSLPAVGQGAVGIEARLDDDRLRALLEPLNHPETANRVLCERAMNNR 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I ++ G ++ +V DG + +G DA +G A + Sbjct: 239 LEGGCQVPIGSYSLIDGDQIWLRALVGEPDGSVMIRGEVSGPVSDAEALGTQLADQLLND 298 Query: 300 SNKNVFN 306 K + Sbjct: 299 GAKEILE 305 >gi|255743926|ref|ZP_05417881.1| porphobilinogen deaminase [Vibrio cholera CIRS 101] gi|262151165|ref|ZP_06028304.1| porphobilinogen deaminase [Vibrio cholerae INDRE 91/1] gi|262167035|ref|ZP_06034752.1| porphobilinogen deaminase [Vibrio cholerae RC27] gi|262189994|ref|ZP_06048299.1| porphobilinogen deaminase [Vibrio cholerae CT 5369-93] gi|11386839|sp|Q9KVM1|HEM3_VIBCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|255738409|gb|EET93799.1| porphobilinogen deaminase [Vibrio cholera CIRS 101] gi|262024553|gb|EEY43237.1| porphobilinogen deaminase [Vibrio cholerae RC27] gi|262031059|gb|EEY49684.1| porphobilinogen deaminase [Vibrio cholerae INDRE 91/1] gi|262034117|gb|EEY52552.1| porphobilinogen deaminase [Vibrio cholerae CT 5369-93] Length = 311 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G T++ +V DG G R A +G A+ + Sbjct: 239 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|327483021|gb|AEA77428.1| Porphobilinogen deaminase [Vibrio cholerae LMA3894-4] Length = 311 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G T++ +V DG G R A +G A+ + Sbjct: 239 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|254291929|ref|ZP_04962710.1| porphobilinogen deaminase [Vibrio cholerae AM-19226] gi|150422139|gb|EDN14105.1| porphobilinogen deaminase [Vibrio cholerae AM-19226] Length = 311 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G T++ +V DG G R A +G A+ + Sbjct: 239 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSKIVRGEIRGPRTQAEQLGITLAEQLLSQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|262404857|ref|ZP_06081411.1| porphobilinogen deaminase [Vibrio sp. RC586] gi|262348941|gb|EEY98080.1| porphobilinogen deaminase [Vibrio sp. RC586] Length = 311 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + D Sbjct: 59 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTYVKIDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL Sbjct: 119 LPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L Sbjct: 179 LESRIRNFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A G ++ +V DG G R +A +G A+ + Sbjct: 239 QGGCQVPIGSYALLDGDDIWLRALVGEPDGSQIVHGEIRGPRSEAEQLGITLAEQLLEQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|163803631|ref|ZP_02197496.1| porphobilinogen deaminase [Vibrio sp. AND4] gi|159172579|gb|EDP57439.1| porphobilinogen deaminase [Vibrio sp. AND4] Length = 312 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 110/304 (36%), Positives = 172/304 (56%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QSTPIRIATRKSPLALWQAHFVKDALQSAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++ DL Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPIDFPDGLGLVTICEREDPRDAFVSNTYNNIDDL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ L +R D+ + + RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLEL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I+ + E P+ GQGA+ IE +++ + ++L++ +NH DT D V CERA L+ Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRIDDERLRKLLEPLNHRDTADRVRCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I ++ G ++ +V DG + +G+R DA +G A + Sbjct: 241 GGCQVPIGSYSLLDGDNIWLRALVGEPDGSLIVRGEIHGHRNDAEALGVQLANELLANGA 300 Query: 302 KNVF 305 +++ Sbjct: 301 RDIL 304 >gi|269961540|ref|ZP_06175903.1| porphobilinogen deaminase [Vibrio harveyi 1DA3] gi|269833769|gb|EEZ87865.1| porphobilinogen deaminase [Vibrio harveyi 1DA3] Length = 312 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 110/304 (36%), Positives = 172/304 (56%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QSTPIRIATRKSPLALWQAHYVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ L +R D+ + + RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLEL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I+ + E P+ GQGA+ IE V++ + +L++ +NH+DT D V CERA L+ Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHQDTADRVRCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I ++ G ++ +V DG + G+R DA +G A + Sbjct: 241 GGCQVPIGSYSLLDGDNIWLRALVGEPDGSLIVRGEIRGHRNDAEALGVQLANELLENGA 300 Query: 302 KNVF 305 +++ Sbjct: 301 RDIL 304 >gi|258626632|ref|ZP_05721462.1| porphobilinogen deaminase [Vibrio mimicus VM603] gi|258581136|gb|EEW06055.1| porphobilinogen deaminase [Vibrio mimicus VM603] Length = 311 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLKVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + D Sbjct: 59 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTYAKIDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL Sbjct: 119 LPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L Sbjct: 179 LESRIRNFIEPEQSLPAVGQGAVGIECRLDDQRVRELLVPLNHTDTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A G ++ +V DG G R +A +G A+ + Sbjct: 239 QGGCQVPIGSYALLDGDEIWLRALVGEPDGSQIVRGEIRGPRSEAEQLGITLAEQLLGQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|262273217|ref|ZP_06051033.1| porphobilinogen deaminase [Grimontia hollisae CIP 101886] gi|262222795|gb|EEY74104.1| porphobilinogen deaminase [Grimontia hollisae CIP 101886] Length = 311 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 107/306 (34%), Positives = 165/306 (53%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M P RI TR SPLAL A +++L H P + ++P+ TKGD I + L ++GG Sbjct: 1 MTSTPIRIATRQSPLALWQAEFVKAALEATH--PGLTVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P + +GL + RED RD F+S+ S+ + Sbjct: 59 KGLFVKELEQAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYTSISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+KRL Sbjct: 119 LPQGAIVGTSSLRRQCQLRAMRPDLVIKDLRGNVGTRLGKLDNGEYDAIILASAGLKRLN 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ + E+ P+ GQGA+ IE +++ + + L++ + +T V CERA L Sbjct: 179 LHDRIRNEIEPEEILPAVGQGAVGIECRLDDERVRALLEPLADANTTYRVLCERAMNNRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A G ++ +V DG G A +G A+ + Sbjct: 239 MGGCQVPIGSYAEIHGDQIHLRALVGEPDGSKIVRGEVTGPLEKAEELGTGLAEQLLDDG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 ARAILE 304 >gi|153826278|ref|ZP_01978945.1| porphobilinogen deaminase [Vibrio cholerae MZO-2] gi|149739946|gb|EDM54125.1| porphobilinogen deaminase [Vibrio cholerae MZO-2] Length = 311 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L Sbjct: 179 LESRIRSFIEPEQSLPAVGQGALGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ +V DG G R A +G A+ + Sbjct: 239 QGGCQVPIGSYALLEGDHIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|153835503|ref|ZP_01988170.1| porphobilinogen deaminase [Vibrio harveyi HY01] gi|156972662|ref|YP_001443569.1| porphobilinogen deaminase [Vibrio harveyi ATCC BAA-1116] gi|166217790|sp|A7MXU9|HEM3_VIBHB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|148867929|gb|EDL67139.1| porphobilinogen deaminase [Vibrio harveyi HY01] gi|156524256|gb|ABU69342.1| hypothetical protein VIBHAR_00314 [Vibrio harveyi ATCC BAA-1116] Length = 312 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 110/304 (36%), Positives = 172/304 (56%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QSTPIRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ L +R D+ + + RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLEL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I+ + E P+ GQGA+ IE V++ + +L++ +NH+DT D V CERA L+ Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHQDTADRVRCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I ++ G ++ +V DG + G+R DA +G A + Sbjct: 241 GGCQVPIGSYSLLDGDNIWLRALVGEPDGSLIVRGEIRGHRNDAEALGVQLANELLENGA 300 Query: 302 KNVF 305 +++ Sbjct: 301 RDIL 304 >gi|254226598|ref|ZP_04920179.1| porphobilinogen deaminase [Vibrio cholerae V51] gi|125620870|gb|EAZ49223.1| porphobilinogen deaminase [Vibrio cholerae V51] Length = 317 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVDDQRVRALLTPLNHADTADRVRCERAMNLTL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ +V DG G R A +G A+ + Sbjct: 245 QGGCQVPIGSYALLEGDHIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304 Query: 301 NKNVFN 306 K + Sbjct: 305 AKEILE 310 >gi|297581838|ref|ZP_06943759.1| porphobilinogen deaminase [Vibrio cholerae RC385] gi|297533932|gb|EFH72772.1| porphobilinogen deaminase [Vibrio cholerae RC385] Length = 317 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 115/306 (37%), Positives = 170/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L RSD+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARSDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G+T++ +V DG G R A +G A+ + Sbjct: 245 QGGCQVPIGSYALLEGNTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304 Query: 301 NKNVFN 306 K + Sbjct: 305 AKEILE 310 >gi|229520088|ref|ZP_04409516.1| porphobilinogen deaminase [Vibrio cholerae TM 11079-80] gi|229342876|gb|EEO07866.1| porphobilinogen deaminase [Vibrio cholerae TM 11079-80] Length = 317 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDAILDTPLAKVGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ +V DG G R A +G A+ + Sbjct: 245 QGGCQVPIGSYALLEGDHIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304 Query: 301 NKNVFN 306 K + Sbjct: 305 AKEILE 310 >gi|254360510|ref|ZP_04976659.1| hydroxymethylbilane synthase [Mannheimia haemolytica PHL213] gi|261493197|ref|ZP_05989725.1| hydroxymethylbilane synthase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495982|ref|ZP_05992397.1| hydroxymethylbilane synthase [Mannheimia haemolytica serotype A2 str. OVINE] gi|153091050|gb|EDN73055.1| hydroxymethylbilane synthase [Mannheimia haemolytica PHL213] gi|261308358|gb|EEY09646.1| hydroxymethylbilane synthase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311145|gb|EEY12320.1| hydroxymethylbilane synthase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 311 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 111/303 (36%), Positives = 164/303 (54%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR SPLAL A +S L P ++ ++ + TKGD I + L +IGGKG Sbjct: 2 KDILRIATRQSPLALWQANFVKSELEK--HFPQLSVELVTMVTKGDIILDTPLAKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ SL+DL Sbjct: 60 LFVKELELALLENRADIAVHSMKDVPMSFPEGLGLAVICEREDPRDAFVSNNYHSLEDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL + Sbjct: 120 KGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGLQ 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ +++E P+ GQGA+ IET N+ + + +NH T V ERA L G Sbjct: 180 ERIRSYISVEQSLPAAGQGAVGIETRANDERILNYIAKLNHSSTACCVMAERAMNTRLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I G+A +G L +V + DG S G++ +A +G A+ + Sbjct: 240 GCQVPIGGYATLEGDELTLNALVGSLDGSQIIRASAKGHKQEAEQLGILVAEQLLAQGAD 299 Query: 303 NVF 305 + Sbjct: 300 KIL 302 >gi|320178095|gb|EFW53075.1| Porphobilinogen deaminase [Shigella boydii ATCC 9905] Length = 559 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|163748699|ref|ZP_02155952.1| porphobilinogen deaminase [Shewanella benthica KT99] gi|161331809|gb|EDQ02613.1| porphobilinogen deaminase [Shewanella benthica KT99] Length = 309 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 118/306 (38%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLAL A ++ L H P + ++P+STKGD I + L ++GG Sbjct: 1 MSQNVIRIATRKSPLALWQAEFVKAELEKFH--PGLTVELLPMSTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P GL + RED RD F+S+ +S+ D Sbjct: 59 KGLFVKELEVAILEDRADIAVHSIKDVPVDFPDGLGLEVICEREDPRDAFVSNDYKSIGD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ +ID RG + TRL KL+ AI+LA AG+KRLK Sbjct: 119 LPQGAVVGTSSLRRQCQIRGMRPDLKIIDLRGNVGTRLGKLDAGNYDAIILAAAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I ++ ED P+ GQGA+ IE +N + + L+ + H +T V ERA L Sbjct: 179 LEERITSFISTEDSLPANGQGAVGIECRTDNERVKALLAPLEHAETRFRVTAERAMNTHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA +G TL G+V DG + G + DA IG A+ + Sbjct: 239 EGGCQVPIGAFAEIQGDTLTLRGLVGNPDGSKIITGTCVGPKTDAKAIGIALAEELLGKG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKEILD 304 >gi|218550973|ref|YP_002384764.1| porphobilinogen deaminase [Escherichia fergusonii ATCC 35469] gi|226740637|sp|B7LU53|HEM3_ESCF3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|218358514|emb|CAQ91161.1| hydroxymethylbilane synthase [Escherichia fergusonii ATCC 35469] Length = 313 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDALMAKH--PGLTVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL + Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNKYASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRDALPPEVSLPAVGQGAVGIECRLDDTRTRELLAALNHPETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G ++ +V A DG R G+ DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIGGEIWLRALVGAPDGSQMIRGERRGSPQDAEKMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARAIL 303 >gi|167625822|ref|YP_001676116.1| porphobilinogen deaminase [Shewanella halifaxensis HAW-EB4] gi|189028156|sp|B0TJ54|HEM3_SHEHH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|167355844|gb|ABZ78457.1| porphobilinogen deaminase [Shewanella halifaxensis HAW-EB4] Length = 310 Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 175/306 (57%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H+ + ++P+STKGD I + L ++GG Sbjct: 1 MSQNLIRIATRKSPLAMWQAEFVKAELEKIHE--GLTVELLPMSTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G+ D AVHS KD+P + +GL + RED RD F+S+T ++++D Sbjct: 59 KGLFVKELEVAMLEGKADIAVHSMKDVPVEFPEGLGLEVICEREDPRDAFVSNTYKTIED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK Sbjct: 119 LPQGAVVGTSSLRRQCQIRAARPDLVIKDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I ++ E P+ GQGA+ IE ++ + + L+ + H +T V ERA L Sbjct: 179 LEERIASFISAEQSLPANGQGAVGIECRTDDARVKALLAPLEHAETRMRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G TL G+V DG + +GN+ DA +G A+ + Sbjct: 239 EGGCQVPIGAYAEIDGDTLSLRGLVGNPDGSQIITAASSGNKADAEKLGVALAEELLAKG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKTILD 304 >gi|227114730|ref|ZP_03828386.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 313 Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats. Identities = 117/306 (38%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG Sbjct: 1 MLANIIRIATRQSPLALWQARYVQQCL--NHLYPDLHVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNHYDSLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S +GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPQGSCVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L+ E+ P+ GQGAI IE +++ + L+ +NH T V ERA L Sbjct: 179 LEARIRCALSPEESLPAVGQGAIGIECRLDDEHVRHLLAPLNHPATAARVLAERAMNVRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G TL+ +V A DG R GN DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIVGERKGNVSDAEQLGIALAEELLAKG 298 Query: 301 NKNVFN 306 + Sbjct: 299 ASAILQ 304 >gi|114561627|ref|YP_749140.1| porphobilinogen deaminase [Shewanella frigidimarina NCIMB 400] gi|122300909|sp|Q088L3|HEM3_SHEFN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|114332920|gb|ABI70302.1| porphobilinogen deaminase [Shewanella frigidimarina NCIMB 400] Length = 309 Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 171/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L +IGG Sbjct: 1 MSENIIRIATRKSPLAMWQAEFVKAELERIH--PGLTVELLPMSTKGDVILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P + +GL + RED RD F+S+ +S+ + Sbjct: 59 KGLFVKELEVAMLENRADIAVHSMKDLPVEFPEGLGLQVICEREDPRDAFVSNNYKSISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + D RG + TRL KL++ AI+LA AG+ RLK Sbjct: 119 LPQGAVVGTSSLRRQCQIRAARPDLVIKDLRGNVGTRLAKLDSGDYDAIILAAAGLIRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++ E+ P+ GQGA+ IE ++ + + L+ + H +T V ERA L Sbjct: 179 LNERIANFISAEESLPANGQGAVGIECRTDDARVKALLAPLEHLETRYRVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA G L G+V DG + +G++ DA+ +G A+ + Sbjct: 239 EGGCQVPIGAFAEINGDNLTLRGLVGNPDGSQIIIGTVSGSKTDAVALGESLAEDLLSRG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKTILD 304 >gi|324111028|gb|EGC05015.1| porphobilinogen deaminase [Escherichia fergusonii B253] gi|325499227|gb|EGC97086.1| porphobilinogen deaminase [Escherichia fergusonii ECD227] Length = 313 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDALMAKH--PGLTVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL + Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNKYASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRDALPPEVSLPAVGQGAVGIECRLDDTRTRELLAALNHPETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G ++ +V A DG R G+ DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIGGEIWLRALVGAPDGSQMIRGERRGSPQDAEKMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARAIL 303 >gi|170724850|ref|YP_001758876.1| porphobilinogen deaminase [Shewanella woodyi ATCC 51908] gi|238059003|sp|B1KQC6|HEM3_SHEWM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|169810197|gb|ACA84781.1| porphobilinogen deaminase [Shewanella woodyi ATCC 51908] Length = 309 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLAL A ++ L H P + ++P+STKGD I + L ++GG Sbjct: 1 MSQNVIRIATRKSPLALWQAEFVKAELEKFH--PDLTVELLPMSTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +S+ + Sbjct: 59 KGLFVKELEVAMLENRADIAVHSMKDVPVDFPEGLGLEIICEREDPRDAFVSNNYKSISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK Sbjct: 119 LPKGAVVGTSSLRRQCQIRAARPDLQIRDLRGNVGTRLGKLDAGTYDAIILAAAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I ++ E+ P+ GQGA+ IE ++ + + L+ + H +T V ERA L Sbjct: 179 LEERITSFISAEESLPANGQGAVGIECRTDDERVKALLAPLEHAETRFRVIAERAMNTHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A TL G+V DG ++ G + DA +G A+ + Sbjct: 239 EGGCQVPIGAYAEIVDDTLTLRGLVGNPDGTQIIASTKVGPKTDAKALGISLAEELLSKG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKTILD 304 >gi|328472411|gb|EGF43277.1| porphobilinogen deaminase [Vibrio parahaemolyticus 10329] Length = 312 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 113/304 (37%), Positives = 170/304 (55%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QSTPIRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T S+ +L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSSIDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRLK Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I+ + E P+ GQGA+ IE V++ + +L++ +NH+DT D V CERA L+ Sbjct: 181 EDRIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHKDTADRVLCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I +A +G ++ +V DG G+R D +G A + Sbjct: 241 GGCQVPIGSYALLEGDEIWLRALVGEPDGSEIVRGEVRGHRKDGEALGIQLANELLDNGA 300 Query: 302 KNVF 305 +++ Sbjct: 301 RDIL 304 >gi|157368427|ref|YP_001476416.1| porphobilinogen deaminase [Serratia proteamaculans 568] gi|167008819|sp|A8G848|HEM3_SERP5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157320191|gb|ABV39288.1| porphobilinogen deaminase [Serratia proteamaculans 568] Length = 313 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 117/306 (38%), Positives = 166/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQQRLMANH--PGLQVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P GL + R+D RD F+S+ SL Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPVDFPAGLGLVTICERDDPRDAFVSNRFTSLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ V D RG + TRL+KL+N AI+LA AG+KRL Sbjct: 119 LPQGSVVGTSSLRRQCQLRERRPDLIVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ L+ E+ P+ GQGA+ IE +++ + L+ +NH T V ERA L Sbjct: 179 LEQRIRSPLSPEECLPAVGQGAVGIECRLDDETTRALLAPLNHAVTETRVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G +L+ +V + DG R G A +G + A+ + Sbjct: 239 EGGCQVPIGSYAELDGDSLWLRALVGSPDGSQMVRGERRGPAALAEQMGIELAEELLAQG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 AREILQ 304 >gi|157377265|ref|YP_001475865.1| porphobilinogen deaminase [Shewanella sediminis HAW-EB3] gi|189028158|sp|A8G0W4|HEM3_SHESH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157319639|gb|ABV38737.1| Hydroxymethylbilane synthase [Shewanella sediminis HAW-EB3] Length = 309 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 172/306 (56%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLAL A ++ L H+ + ++P+STKGD I + L ++GG Sbjct: 1 MSQNVIRIATRKSPLALWQAEFVKAELEKFHE--GLTVELLPMSTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +++ + Sbjct: 59 KGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNNYKNISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK Sbjct: 119 LPQGAVVGTSSLRRQCQIRASRPDLVIRDLRGNVGTRLGKLDAGNYDAIILAAAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I ++ E+ P+ GQGA+ IE +N+ + + L+ + H +T V ERA L Sbjct: 179 LEERITSFISAEESLPANGQGAVGIECRINDERVKALLAPLEHTETRHRVIAERAMNTHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + TL G+V DG E ++ G++ DA IG A+ + Sbjct: 239 EGGCQVPIGAYAEIQDDTLTLRGLVGNPDGSHIIEATKVGSKTDAQAIGVALAEELLSKG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKAILD 304 >gi|238750675|ref|ZP_04612174.1| Porphobilinogen deaminase [Yersinia rohdei ATCC 43380] gi|238711065|gb|EEQ03284.1| Porphobilinogen deaminase [Yersinia rohdei ATCC 43380] Length = 313 Score = 409 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLNKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S L D Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSSHYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ + E+ P+ GQGA+ IE +++ ++L+ +NH +T V ERA L Sbjct: 179 LKSRIRYAMPAEESLPAVGQGAVGIECRLDDDFTRQLLVPLNHRETELRVCAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G TL+ +V A DG R G DA +G + A + Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSEIIRGERRGPAEDAEQMGIELADELLSRG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|28899762|ref|NP_799367.1| porphobilinogen deaminase [Vibrio parahaemolyticus RIMD 2210633] gi|153838754|ref|ZP_01991421.1| porphobilinogen deaminase [Vibrio parahaemolyticus AQ3810] gi|260365170|ref|ZP_05777735.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus K5030] gi|260878130|ref|ZP_05890485.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AN-5034] gi|260895813|ref|ZP_05904309.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus Peru-466] gi|260900854|ref|ZP_05909249.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AQ4037] gi|32363175|sp|Q87KI9|HEM3_VIBPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|28808014|dbj|BAC61251.1| porphobilinogen deaminase [Vibrio parahaemolyticus RIMD 2210633] gi|149747840|gb|EDM58724.1| porphobilinogen deaminase [Vibrio parahaemolyticus AQ3810] gi|308087192|gb|EFO36887.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus Peru-466] gi|308092784|gb|EFO42479.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AN-5034] gi|308110595|gb|EFO48135.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AQ4037] gi|308111033|gb|EFO48573.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus K5030] Length = 312 Score = 409 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 112/304 (36%), Positives = 170/304 (55%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QSTPIRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSNINEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRLK Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I+ + E P+ GQGA+ IE V++ + +L++ +NH+DT D V CERA L+ Sbjct: 181 EDRIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHKDTADRVLCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I +A +G ++ +V DG G+R D +G A + Sbjct: 241 GGCQVPIGSYALLEGDEIWLRALVGEPDGSEIVRGEVRGHRKDGEALGIQLANELLDSGA 300 Query: 302 KNVF 305 +++ Sbjct: 301 RDIL 304 >gi|261823396|ref|YP_003261502.1| porphobilinogen deaminase [Pectobacterium wasabiae WPP163] gi|261607409|gb|ACX89895.1| porphobilinogen deaminase [Pectobacterium wasabiae WPP163] Length = 313 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 118/306 (38%), Positives = 172/306 (56%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG Sbjct: 1 MLANIIRIATRQSPLALWQARYVQQRL--NHLYPDLSVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNHYDSLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S +GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPQGSCVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ L+ E+ P+ GQGAI IE +++ + ++L+ +NH DT V ERA L Sbjct: 179 LEERIRCALSPEESLPAVGQGAIGIECRLDDDRIRQLLAPLNHTDTAARVLAERAMNVRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G+TL+ +V A DG R G+ DA IG A+ + Sbjct: 239 EGGCQVPIGSYAELEGNTLWLRALVGAPDGSQMIVGERKGSVVDAEKIGIALAEELLAKG 298 Query: 301 NKNVFN 306 + Sbjct: 299 ASAILQ 304 >gi|323495298|ref|ZP_08100379.1| porphobilinogen deaminase [Vibrio brasiliensis LMG 20546] gi|323310475|gb|EGA63658.1| porphobilinogen deaminase [Vibrio brasiliensis LMG 20546] Length = 312 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 110/304 (36%), Positives = 169/304 (55%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QTTPIRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T S+ +L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNSIDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ + R D+ + + RG + TRL KL+ AI+LA AG+KRL+ Sbjct: 121 PQGAVVGTCSLRRQCQIKEARPDLIIKELRGNVGTRLGKLDAGDYDAIILAAAGLKRLEL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ IK + E P+ GQGA+ IE +++ + +L++ +NH++T D V CERA L+ Sbjct: 181 EERIKSFIEPEQSLPAVGQGAVGIECRLDDDRLIKLLEPLNHKETADRVLCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I ++ G ++ +V DG G+R DA +G + A + Sbjct: 241 GGCQVPIGSYSLIDGDNIWLRALVGEPDGSKIVRGEIRGSRTDAEALGVELANQLLADGA 300 Query: 302 KNVF 305 K + Sbjct: 301 KEIL 304 >gi|89074445|ref|ZP_01160922.1| porphobilinogen deaminase [Photobacterium sp. SKA34] gi|89049733|gb|EAR55283.1| porphobilinogen deaminase [Photobacterium sp. SKA34] Length = 310 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 104/306 (33%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ + H P ++ ++P+ TKGD I + L ++GG Sbjct: 1 MSNQLIRIATRKSPLAMWQAEFVKAEIEQAH--PGISVELVPMITKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ ++ + Sbjct: 59 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNKYNNIDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ V D RG + TRL K++ + AI+LA AG+KRLK Sbjct: 119 LPQGAIVGTSSLRRQCQLRAQRPDLIVNDLRGNVNTRLRKMDEGQYDAIILACAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE +++ + ++L+ ++ + T V CERA L Sbjct: 179 MEDRIRSEIAPEVSLPAVGQGAVGIECRLDDTRVRQLLTALSDQATTTRVLCERAMNNHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ +V DG G A +G A+ + Sbjct: 239 QGGCQVPIGSYAELEGDQVWLRALVGEPDGSKIVRAEIRGPIEQAEQLGETLAEQLLNDG 298 Query: 301 NKNVFN 306 +++ + Sbjct: 299 ARDILD 304 >gi|238765355|ref|ZP_04626280.1| Porphobilinogen deaminase [Yersinia kristensenii ATCC 33638] gi|238696442|gb|EEP89234.1| Porphobilinogen deaminase [Yersinia kristensenii ATCC 33638] Length = 313 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL + R+D RD F+S L D Sbjct: 59 KGLFVKELELAMLDGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSSNYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + HAI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDKGEYHAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH +T V ERA L Sbjct: 179 LETRIRYAMPAEESLPAVGQGAVGIECRLDDDYTRQLLAPLNHRETELRVCAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G+TL+ +V A DG R G +A +G + A + Sbjct: 239 EGGCQVPIGSYAELDGNTLWLRALVGAPDGSEIIRGERRGPAENAEQMGVELADELLARG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|260774857|ref|ZP_05883759.1| porphobilinogen deaminase [Vibrio coralliilyticus ATCC BAA-450] gi|260609282|gb|EEX35437.1| porphobilinogen deaminase [Vibrio coralliilyticus ATCC BAA-450] Length = 312 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 109/304 (35%), Positives = 172/304 (56%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QSTPIRIATRKSPLALWQAYYVRDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYANIDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ + +R D+ + + RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 121 PQGAVVGTCSLRRQCQIKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLEL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+ Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I ++ G ++ +V DG G+R DA +G A + Sbjct: 241 GGCQVPIGSYSLLDGDDIWLRALVGEPDGSKIVRGEIKGSRADAEKLGVTLANQLLDDGA 300 Query: 302 KNVF 305 +++ Sbjct: 301 RDIL 304 >gi|62182409|ref|YP_218826.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|167553883|ref|ZP_02347627.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168244626|ref|ZP_02669558.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263173|ref|ZP_02685146.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467648|ref|ZP_02701485.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194442426|ref|YP_002043172.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197247501|ref|YP_002148864.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|213029666|ref|ZP_03344113.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213416718|ref|ZP_03349862.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213425401|ref|ZP_03358151.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213649584|ref|ZP_03379637.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213865139|ref|ZP_03387258.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|62130042|gb|AAX67745.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|194401089|gb|ACF61311.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|195630016|gb|EDX48676.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197211204|gb|ACH48601.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205321788|gb|EDZ09627.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205336530|gb|EDZ23294.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205348255|gb|EDZ34886.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|322716902|gb|EFZ08473.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 320 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D Sbjct: 66 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDD 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L Sbjct: 186 LESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG + R G+ A +G A+ + Sbjct: 246 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 305 Query: 301 NKNVF 305 + + Sbjct: 306 ARAIL 310 >gi|16767209|ref|NP_462824.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194449507|ref|YP_002047954.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|207859144|ref|YP_002245795.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|6960263|gb|AAF33453.1| 89% identity with E. coli porphobilinogen deaminase (HEMC) (SP:P06983); contains similarity to Pfam family PF01379 (Porphobilinogen deaminase), score=627.8, E=6.2e-185, N=1 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16422502|gb|AAL22783.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194407811|gb|ACF68030.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|206710947|emb|CAR35314.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261249062|emb|CBG26922.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996216|gb|ACY91101.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160454|emb|CBW19983.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|320088349|emb|CBY98109.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|323132286|gb|ADX19716.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326625658|gb|EGE32003.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332990774|gb|AEF09757.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 318 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D Sbjct: 64 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDD 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L Sbjct: 184 LESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG + R G+ A +G A+ + Sbjct: 244 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 303 Query: 301 NKNVF 305 + + Sbjct: 304 ARAIL 308 >gi|200388118|ref|ZP_03214730.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199605216|gb|EDZ03761.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 320 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D Sbjct: 66 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDD 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L Sbjct: 186 LESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG + R G+ A +G A+ + Sbjct: 246 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVIVRGERRGSPEQAEQMGISLAEELLENG 305 Query: 301 NKNVF 305 + + Sbjct: 306 ARAIL 310 >gi|157960202|ref|YP_001500236.1| porphobilinogen deaminase [Shewanella pealeana ATCC 700345] gi|189028157|sp|A8GZG4|HEM3_SHEPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157845202|gb|ABV85701.1| porphobilinogen deaminase [Shewanella pealeana ATCC 700345] Length = 310 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 172/306 (56%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H+ + ++P+STKGD I + L ++GG Sbjct: 1 MSQNLIRIATRKSPLAMWQAEFVKAELEKIHE--GLTVELLPMSTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++++D Sbjct: 59 KGLFVKELEVAMLEGLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNTYKTIED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK Sbjct: 119 LPQGAVVGTSSLRRQCQIRAARPDLVIKDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I ++ E P+ GQGA+ IE ++ + + L+ + H +T V ERA L Sbjct: 179 LEERIASFISAEQSLPANGQGAVGIECRTDDARVKALLAPLEHAETRMRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G TL G+V DG S +G+ DA +G A+ + Sbjct: 239 EGGCQVPIGAYAEIDGDTLSLRGLVGNPDGSQIITASSSGSTADAEKLGVALAEELLSKG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKTILD 304 >gi|127511252|ref|YP_001092449.1| porphobilinogen deaminase [Shewanella loihica PV-4] gi|126636547|gb|ABO22190.1| porphobilinogen deaminase [Shewanella loihica PV-4] Length = 317 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 171/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L H+ + ++P+STKGD I + L ++GG Sbjct: 9 MSQNVIRIATRKSPLAMWQAEFVKAELEKAHE--GLVVELLPMSTKGDVILDTPLAKVGG 66 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G+ D AVHS KD+P +GL + RED RD F+S+T +++++ Sbjct: 67 KGLFVKELEVAMLEGKADIAVHSMKDVPVDFPEGLGLQVICEREDPRDAFVSNTYKNIEE 126 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK Sbjct: 127 LPQGAIVGTSSLRRQCQIRAARPDLEIRDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLK 186 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++ ED P+ GQGA+ IE ++ + + L+ + H +T V ERA L Sbjct: 187 LEDRIASFISAEDSLPANGQGAVGIECRTDDERVKALLAPLEHIETRYRVIAERAMNTRL 246 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G TL G+V DG + +G + DA +G A + Sbjct: 247 EGGCQVPIGAYAEIDGDTLSLRGLVGNPDGSQVIRGTTSGAKQDAEQLGIALADELLSKG 306 Query: 301 NKNVFN 306 K + + Sbjct: 307 AKAILD 312 >gi|254230107|ref|ZP_04923503.1| porphobilinogen deaminase [Vibrio sp. Ex25] gi|262392880|ref|YP_003284734.1| porphobilinogen deaminase [Vibrio sp. Ex25] gi|151937352|gb|EDN56214.1| porphobilinogen deaminase [Vibrio sp. Ex25] gi|262336474|gb|ACY50269.1| porphobilinogen deaminase [Vibrio sp. Ex25] Length = 312 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 111/304 (36%), Positives = 170/304 (55%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QSTPIRIATRKSPLALWQAYFVKDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSNIDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRLK Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+ Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRLDDERLLKLLEPLNHQDTVDRVLCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I +A G ++ +V DG G+R D +G A + Sbjct: 241 GGCQVPIGSYALLDGDNIWLRALVGEPDGSEIVRGEIRGHRKDGEALGVQLANELLDNGA 300 Query: 302 KNVF 305 + + Sbjct: 301 REIL 304 >gi|86148167|ref|ZP_01066465.1| porphobilinogen deaminase [Vibrio sp. MED222] gi|218710949|ref|YP_002418570.1| porphobilinogen deaminase [Vibrio splendidus LGP32] gi|254800262|sp|B7VMD9|HEM3_VIBSL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|85834014|gb|EAQ52174.1| porphobilinogen deaminase [Vibrio sp. MED222] gi|218323968|emb|CAV20330.1| Porphobilinogen deaminase [Vibrio splendidus LGP32] Length = 312 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 111/301 (36%), Positives = 172/301 (57%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++GGKGLF Sbjct: 6 PIRIATRKSPLALWQAYFVRDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ +L Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GT SLRR+ LL +R D+ + + RG + TRL KL++ + AI+LA AG+KRL+ E+ Sbjct: 124 AVVGTCSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRLELEER 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+G C Sbjct: 184 IRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLTLEGGC 243 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I ++ G ++ +V DG +G R DA +G A + + + Sbjct: 244 QVPIGSYSLLDGDNIWLRALVGEPDGSKMVRGEISGLRKDAEALGVTLANQLLDDGAREI 303 Query: 305 F 305 Sbjct: 304 L 304 >gi|238784737|ref|ZP_04628740.1| Porphobilinogen deaminase [Yersinia bercovieri ATCC 43970] gi|238714333|gb|EEQ06342.1| Porphobilinogen deaminase [Yersinia bercovieri ATCC 43970] Length = 313 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLHVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P GL + R+D RD F+S + L D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPDGLGLVTICERDDPRDAFVSSSYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + +E+ P+ GQGA+ IE +++ ++L+ +NH DT V ERA L Sbjct: 179 LETRIRYAMPVEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRDTELRVCAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G L+ +V A DG R G +A +G + A + Sbjct: 239 EGGCQVPIGSYAELEGDVLWLRALVGAPDGSEIIRGERRGPANNAEQMGIELADELLSRG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|323500165|ref|ZP_08105110.1| porphobilinogen deaminase [Vibrio sinaloensis DSM 21326] gi|323314794|gb|EGA67860.1| porphobilinogen deaminase [Vibrio sinaloensis DSM 21326] Length = 312 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 110/304 (36%), Positives = 170/304 (55%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QSSPIRIATRKSPLALWQAYFVRDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T S+ +L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPSGLGLVTICEREDPRDAFVSNTYNSIDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ L +R D+ + + RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDLIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLEL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+ Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHQDTADRVLCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I +A +G ++ +V DG G R ++ +G A + Sbjct: 241 GGCQVPIGSYALLEGDDIWLRALVGEPDGSQIVRGEIKGPRSESEALGIKLANQLLDEGA 300 Query: 302 KNVF 305 + + Sbjct: 301 REIL 304 >gi|317046390|ref|YP_004114038.1| porphobilinogen deaminase [Pantoea sp. At-9b] gi|316948007|gb|ADU67482.1| porphobilinogen deaminase [Pantoea sp. At-9b] Length = 313 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K FRI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG Sbjct: 1 MLDKIFRIATRQSPLALWQAQYVQQRLMAAH--PGLQVELVPMVTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ S+ Sbjct: 59 KGLFVKELELAMLENRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNHYDSIDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPQGAVVGTSSLRRQCQLSARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + L++ +N DT V ERA L Sbjct: 179 LEDRIRFALPAEISLPAVGQGAVGIECRLDDAELITLLQALNDGDTAVCVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA +G L+ G+V + DG R G R A +G A+ + Sbjct: 239 EGGCQVPIGSFAVLEGDQLWLRGLVGSPDGSQMITGERRGPRDQAEQMGISLAEELLDNG 298 Query: 301 NKNVF 305 + Sbjct: 299 ASEIL 303 >gi|188532369|ref|YP_001906166.1| Porphobilinogen deaminase [Erwinia tasmaniensis Et1/99] gi|238058922|sp|B2VG55|HEM3_ERWT9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|188027411|emb|CAO95258.1| Porphobilinogen deaminase [Erwinia tasmaniensis Et1/99] Length = 313 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L+ H P + ++P+ T+GD I + L ++GG Sbjct: 1 MSDKILRIATRRSPLALWQAEYVQRRLIACH--PGLRVELLPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++SG D AVHS KD+P GL + A RED D F+SH S+ Sbjct: 59 KGLFVKELEQAMLSGSADIAVHSMKDVPVAFPPGLGLVAICEREDPHDAFVSHHYTSVDS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPQGAIVGTSSLRRQCQLSARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I++++ E+ P+ GQGA+ IE +++ + L+ +NH +T V+ ERA L Sbjct: 179 LGDRIRQVMPAEESLPAVGQGAVGIECRLDDIQTIALLAALNHSETACRVSAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + L+ G+V + DG R G R DA +G A+ + Sbjct: 239 EGGCQVPIGSYALLEDDQLWLRGLVGSPDGNEMVRGERRGPRADAEKMGISLAEELLENG 298 Query: 301 NKNVF 305 +++ Sbjct: 299 ARDIL 303 >gi|205354497|ref|YP_002228298.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205274278|emb|CAR39298.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326629631|gb|EGE35974.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 318 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D Sbjct: 64 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDD 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L Sbjct: 184 LEPRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG + R G+ A +G A+ + Sbjct: 244 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 303 Query: 301 NKNVF 305 + + Sbjct: 304 ARAIL 308 >gi|253690341|ref|YP_003019531.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259646261|sp|C6DHC2|HEM3_PECCP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|251756919|gb|ACT14995.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 313 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 119/306 (38%), Positives = 170/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG Sbjct: 1 MLANIIRIATRQSPLALWQARYVQQCL--NHLYPDLHVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL+ Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNRYDSLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+KRL Sbjct: 119 LPEGSCVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLAKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ L+ E+ P+ GQGAI IE +N+ + ++L+ +NH T V ERA L Sbjct: 179 LEERIRCALSPEESLPAVGQGAIGIECRLNDDRIRQLLAPLNHPATAARVQAERAMNVRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G TL+ +V A DG R GN DA IG A+ + Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIVGERRGNVSDAEQIGIALAEELLAKG 298 Query: 301 NKNVFN 306 + Sbjct: 299 ASAILQ 304 >gi|119776386|ref|YP_929126.1| porphobilinogen deaminase [Shewanella amazonensis SB2B] gi|119768886|gb|ABM01457.1| Hydroxymethylbilane synthase [Shewanella amazonensis SB2B] Length = 326 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 115/306 (37%), Positives = 172/306 (56%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG Sbjct: 17 MSQNLIRIATRKSPLAMWQAEFVKAELERIH--PDLTVELLPMSTKGDVILDTPLAKVGG 74 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T +S+ + Sbjct: 75 KGLFVKELEVAMLEGRADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNTYKSIDE 134 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + D RG + TRL KL++ + AI+LA AG+ RLK Sbjct: 135 LPQGAVVGTSSLRRQCQLRARRPDLIIKDLRGNVGTRLAKLDSGEYDAIILAAAGLIRLK 194 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++ E+ P+ GQGA+ IE N+ + + L+ + H++T V ERA L Sbjct: 195 LAERIAGFISTEESLPANGQGAVGIECRTNDERVKALLAPLEHKETRLRVLAERAMNTRL 254 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA + TL G+V DG S G+ DAI +G A + Sbjct: 255 EGGCQVPIGAFAEIEADTLTLRGLVGNPDGSEVITGSVTGSTADAIALGHQLADDLLSRG 314 Query: 301 NKNVFN 306 K + + Sbjct: 315 AKTILD 320 >gi|251787830|ref|YP_003002551.1| porphobilinogen deaminase [Dickeya zeae Ech1591] gi|247536451|gb|ACT05072.1| porphobilinogen deaminase [Dickeya zeae Ech1591] Length = 322 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 115/306 (37%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L D H P + ++P+ T+GD + + L ++GG Sbjct: 11 MVDTILRIATRQSPLALWQAHFVKQRLEDCH--PGLQVELVPMVTRGDVLLDTPLAKVGG 68 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + R+D RD F+S+ +L D Sbjct: 69 KGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYATLDD 128 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+ L +R D+ V D RG + TRL+KL+N AI+LA AG+KRL Sbjct: 129 LPEGACVGTSSLRRQCQLRAYRPDLVVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 188 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ L+ E P+ GQGA+ +E +++ + + L+ +NHEDT V ERA L Sbjct: 189 LAHRIRTALSPEQSLPAVGQGAVGVECRLDDARTRALLAPLNHEDTATRVLAERAMNTRL 248 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + TLY +V A DG R G+R DA +G A + Sbjct: 249 EGGCQVPIGSYAELQDETLYLRALVGAPDGSRIIYAERRGSRQDAETLGIALADELLERG 308 Query: 301 NKNVFN 306 +++ Sbjct: 309 ARDILQ 314 >gi|270264251|ref|ZP_06192518.1| porphobilinogen deaminase [Serratia odorifera 4Rx13] gi|270041900|gb|EFA14997.1| porphobilinogen deaminase [Serratia odorifera 4Rx13] Length = 313 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQQRLMASH--PGLQVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P GL + R+D RD F+S+ S Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIDFPAGLGLVTICERDDPRDAFVSNRFASFDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR++ L R D+ V D RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPQGSVVGTSSLRRQSQLRERRPDLIVRDLRGNVGTRLAKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ L+ E+ P+ GQGA+ IE +++ + L+ +NH T V ERA L Sbjct: 179 LEQRIRSPLSPEECLPAVGQGAVGIECRLDDDATRALLAPLNHAATDIRVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G +L+ +V + DG R G A +G + A+ + Sbjct: 239 EGGCQVPIGSYAELEGDSLWLRALVGSPDGSQMVRGERRGPAALAEQMGVELAEELLARG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|50123108|ref|YP_052275.1| porphobilinogen deaminase [Pectobacterium atrosepticum SCRI1043] gi|55976381|sp|Q6CZG3|HEM3_ERWCT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|49613634|emb|CAG77085.1| porphobilinogen deaminase [Pectobacterium atrosepticum SCRI1043] Length = 313 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 118/306 (38%), Positives = 171/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG Sbjct: 1 MLANIIRIATRQSPLALWQARYVQQCL--NHFYPDLHVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL+ Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNRYDSLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+KRL Sbjct: 119 LPEGSCVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLAKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ L+ E+ P+ GQGAI IE +++ + ++L+ +NH DT V ERA L Sbjct: 179 LEERIRCALSPEESLPAVGQGAIGIECRLDDDRIRQLLAPLNHTDTAARVLAERAMNVRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G TL+ +V A DG R G+ DA IG A+ + Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIVGERKGSVSDAEKIGVALAEELLAKG 298 Query: 301 NKNVFN 306 + Sbjct: 299 ASAILQ 304 >gi|327395980|dbj|BAK13402.1| porphobilinogen deaminase HemC [Pantoea ananatis AJ13355] Length = 317 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K FRI TR SPLAL A + L+ H P + ++P+ TKGD I + L ++GG Sbjct: 5 MLNKIFRIATRQSPLALWQAQYVQQRLISAH--PGLRVELVPMVTKGDIILDTPLAKVGG 62 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ D AVHS KD+P +GL + R+D RD F+S+ S+ + Sbjct: 63 KGLFVKELEQAMLENRADLAVHSMKDVPVAFPEGLGLVTICQRDDPRDAFVSNHYASIDE 122 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSSLRR+ + R D+ + RG + TRL+KL+ + AI+LA AG+ RL Sbjct: 123 LPQGAVIGTSSLRRQCQISARRPDLVIRSLRGNVGTRLSKLDAGEYDAIILAAAGLNRLG 182 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I++ L + P+ GQGA+ IE +++ L++ +NH+DT V ERA L Sbjct: 183 LADRIRQPLPADISLPAVGQGAVGIECRLDDSTLIALLQALNHDDTAVCVRAERAMNTRL 242 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA +G L+ G+V A DG + R G R A +G A + Sbjct: 243 EGGCQVPIGSFAVLEGDELWLRGLVGAPDGSVMVSGERRGPRDQAEQMGISLADELLNGG 302 Query: 301 NKNVF 305 + + Sbjct: 303 AREIL 307 >gi|16762196|ref|NP_457813.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143685|ref|NP_807027.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415793|ref|YP_152868.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194734788|ref|YP_002116870.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197264899|ref|ZP_03164973.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197301061|ref|ZP_02663450.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197364723|ref|YP_002144360.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243181|ref|YP_002217871.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205358019|ref|ZP_02574964.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205360118|ref|ZP_02834695.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|224585757|ref|YP_002639556.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238912944|ref|ZP_04656781.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289825622|ref|ZP_06544800.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|61225723|sp|P0A1Q8|HEM3_SALTY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|61225724|sp|P0A1Q9|HEM3_SALTI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|81599707|sp|Q5PKL7|HEM3_SALPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226706297|sp|B5FN93|HEM3_SALDC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238059000|sp|B5BIU8|HEM3_SALPK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238059001|sp|B4TNV3|HEM3_SALSV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800257|sp|C0Q3B3|HEM3_SALPC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|25292188|pir||AD0920 porphobilinogen deaminase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504500|emb|CAD09382.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi] gi|29139320|gb|AAO70887.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56130050|gb|AAV79556.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194710290|gb|ACF89511.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197096200|emb|CAR61796.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197243154|gb|EDY25774.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197288774|gb|EDY28149.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197937697|gb|ACH75030.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205328154|gb|EDZ14918.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205340974|gb|EDZ27738.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|224470285|gb|ACN48115.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|312915057|dbj|BAJ39031.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225457|gb|EFX50514.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322613018|gb|EFY09969.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617394|gb|EFY14294.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625614|gb|EFY22436.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627037|gb|EFY23830.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631247|gb|EFY28010.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638280|gb|EFY34979.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642784|gb|EFY39371.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646974|gb|EFY43476.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650361|gb|EFY46774.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656348|gb|EFY52642.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657573|gb|EFY53843.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665984|gb|EFY62165.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666723|gb|EFY62900.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671034|gb|EFY67164.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322679259|gb|EFY75311.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681663|gb|EFY77690.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686010|gb|EFY81998.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192636|gb|EFZ77864.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196502|gb|EFZ81652.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203746|gb|EFZ88767.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205379|gb|EFZ90353.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210748|gb|EFZ95624.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215916|gb|EGA00649.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221409|gb|EGA05827.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227573|gb|EGA11729.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231758|gb|EGA15869.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236173|gb|EGA20250.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239590|gb|EGA23638.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244314|gb|EGA28322.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249589|gb|EGA33501.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250319|gb|EGA34205.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256526|gb|EGA40257.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259776|gb|EGA43409.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265184|gb|EGA48682.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268387|gb|EGA51859.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 313 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D Sbjct: 59 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L Sbjct: 179 LESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG + R G+ A +G A+ + Sbjct: 239 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARAIL 303 >gi|170769870|ref|ZP_02904323.1| porphobilinogen deaminase [Escherichia albertii TW07627] gi|170121308|gb|EDS90239.1| porphobilinogen deaminase [Escherichia albertii TW07627] Length = 313 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMTSH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +N+ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRTALPPEVSLPAVGQGAVGIECRLNDTRTRELLAALNHNETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G+ DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELVDGEIWLRALVGAPDGSQIIRGERRGSPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|312884198|ref|ZP_07743909.1| porphobilinogen deaminase [Vibrio caribbenthicus ATCC BAA-2122] gi|309368126|gb|EFP95667.1| porphobilinogen deaminase [Vibrio caribbenthicus ATCC BAA-2122] Length = 312 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 111/304 (36%), Positives = 168/304 (55%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A + +L+ H P + +I + TKGD I + L ++GGK Sbjct: 3 KSTPIRIATRKSPLALWQANYVKEALIKAH--PGLQVELITMVTKGDIILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P KGL + RED RD F+S+ Q++ L Sbjct: 61 GLFVKELENAMLEGRADLAVHSMKDVPVDFPKGLGLVTICEREDPRDAFVSNHYQNIDAL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++++GT SLRR+ + +R D+ V + RG + TRLNKL+ + AI+LA AG+KRL Sbjct: 121 PNNAIVGTCSLRRQCQIKEYRPDLIVKELRGNVGTRLNKLDAGEYDAIILAAAGLKRLGL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I L E P+ GQGA+ IE +++ + +L+ +N DT D V CERA L+ Sbjct: 181 ESRIASFLEPEQSLPAVGQGAVGIECRLDDQRLIDLLAPLNDRDTNDRVKCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I ++ +G ++ +V DG G R DA +G + A + Sbjct: 241 GGCQVPIGSYSVLEGEQIWLRALVGEPDGSQMVRGEIRGKRDDAEQLGIELANQLLDKGA 300 Query: 302 KNVF 305 +++ Sbjct: 301 RDIL 304 >gi|37528461|ref|NP_931806.1| porphobilinogen deaminase [Photorhabdus luminescens subsp. laumondii TTO1] gi|55976477|sp|Q7MYN1|HEM3_PHOLL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|36787899|emb|CAE17016.1| porphobilinogen deaminase (PBG) (hydroxymethylbilane synthase) (HMBS) (pre-uroporphyrinogen synthase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 313 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A + L H P + ++P+ T+GD I + L +IGG Sbjct: 1 MSTKTIRIATRQSPLAMWQALYVQQKLQQCH--PDLEVQLVPMVTQGDVILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S SL + Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPISFPEGLGLVTICERDDPRDAFVSVKYHSLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ V D RG + TRLNKL+N AI+LA AG+KRLK Sbjct: 119 LPTGSIVGTSSLRRQCQLRELRPDLIVRDLRGNVGTRLNKLDNGHYDAIILAVAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L E P+ GQGA+ IE +++ + Q L+ +NH DT V ERA L Sbjct: 179 LHERIRTPLTAEQSLPAVGQGAVGIECRLDDQQTQTLLAPLNHYDTEVCVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + ++ +V A DG + R DA G + A+ + Sbjct: 239 EGGCQVPIGSYAIWQDGKIWLRALVGAPDGSVIIRGERTALPKDACQAGVELAEELLERG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|123440582|ref|YP_001004576.1| porphobilinogen deaminase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332159812|ref|YP_004296389.1| porphobilinogen deaminase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|158512667|sp|A1JI86|HEM3_YERE8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|122087543|emb|CAL10324.1| porphobilinogen deaminase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318607646|emb|CBY29144.1| porphobilinogen deaminase [Yersinia enterocolitica subsp. palearctica Y11] gi|325664042|gb|ADZ40686.1| porphobilinogen deaminase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862558|emb|CBX72712.1| porphobilinogen deaminase [Yersinia enterocolitica W22703] Length = 313 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S L + Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSINYAHLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + HAI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDKGEYHAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH +T V ERA L Sbjct: 179 LETRIRYAMPAEESLPAVGQGAVGIECRLDDNFTRQLLAPLNHRETELRVCAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G TL+ +V A DG R G +A +G + A + Sbjct: 239 EGGCQVPIGSYAELDGDTLWLRALVGAPDGSEIIRGERRGPAENAEQMGVELADELLSRG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|227325802|ref|ZP_03829826.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 313 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 116/306 (37%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG Sbjct: 1 MLANIIRIATRQSPLALWQARYVQQCL--NHLYPDLHVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL+ Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNHYDSLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S +GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPEGSCVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ L+ E+ P+ GQGAI IE +++ ++L+ +NH T V ERA L Sbjct: 179 LEERIRCALSPEESLPAVGQGAIGIECRLDDEHVRQLLAPLNHPATAARVLAERAMNVRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G TL+ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIVGERKGRVSDAEQLGIALAEELLAKG 298 Query: 301 NKNVFN 306 + Sbjct: 299 ASAILQ 304 >gi|300939977|ref|ZP_07154605.1| porphobilinogen deaminase [Escherichia coli MS 21-1] gi|300455181|gb|EFK18674.1| porphobilinogen deaminase [Escherichia coli MS 21-1] Length = 320 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYESLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|56461658|ref|YP_156939.1| porphobilinogen deaminase [Idiomarina loihiensis L2TR] gi|61213262|sp|Q5QUS3|HEM3_IDILO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|56180668|gb|AAV83390.1| Porphobilinogen deaminase [Idiomarina loihiensis L2TR] Length = 313 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 103/305 (33%), Positives = 164/305 (53%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ RI TR S LAL A + L ++H P ++ ++P+STKGD I + L +IGG Sbjct: 1 MTQR-VRIATRKSKLALWQAEHIQQRLEELH--PGLSVELVPMSTKGDVILDTPLAKIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + GL++ RED RD F+S+ ++L + Sbjct: 58 KGLFVKELEVAMLEGRADIAVHSMKDLPVEFPPGLELHTICEREDPRDAFVSNNYKNLNE 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT SLRR+ + + + D RG ++TRL KL+ + AI+LA +G+ RL+ Sbjct: 118 LPEGAVVGTCSLRRRCQVKEQFPHLVIKDLRGNVQTRLRKLDEGEFDAIILAASGLIRLE 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I + +E P+ GQGA+ IE ++ + + L+ + ++T V ERA L Sbjct: 178 LGDRITSFIPVEQSLPANGQGALGIECRSDDDEMKALLAPLQCQETRTRVLAERAMNRGL 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DG C+ I +A +G +Y G+V DG G A +G + A+ + Sbjct: 238 DGGCQVPIGAYAELEGDEVYLRGLVGEPDGGKVLRDEVRGPASKAEELGSELAERLLKQG 297 Query: 301 NKNVF 305 + Sbjct: 298 AAEIL 302 >gi|204930376|ref|ZP_03221353.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204320780|gb|EDZ05982.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 320 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 160/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D Sbjct: 66 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDD 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERHPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L Sbjct: 186 LESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG + R G+ A +G A+ + Sbjct: 246 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 305 Query: 301 NKNVF 305 + + Sbjct: 306 ARAIL 310 >gi|269964925|ref|ZP_06179095.1| porphobilinogen deaminase [Vibrio alginolyticus 40B] gi|269830401|gb|EEZ84625.1| porphobilinogen deaminase [Vibrio alginolyticus 40B] Length = 312 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 111/304 (36%), Positives = 169/304 (55%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QSTPIRIATRKSPLALWQAYFVKDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + +L Sbjct: 61 GLFVKELEIAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSHIDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRLK Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+ Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRLDDERLLKLLEPLNHQDTVDRVLCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I +A G ++ +V DG G+R D +G A + Sbjct: 241 GGCQVPIGSYALLDGDNIWLRALVGEPDGSEIVRGEIRGHRKDGEALGVQLANELLDNGA 300 Query: 302 KNVF 305 + + Sbjct: 301 REIL 304 >gi|15804393|ref|NP_290433.1| porphobilinogen deaminase [Escherichia coli O157:H7 EDL933] gi|15833989|ref|NP_312762.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. Sakai] gi|300900647|ref|ZP_07118805.1| porphobilinogen deaminase [Escherichia coli MS 198-1] gi|301025752|ref|ZP_07189267.1| porphobilinogen deaminase [Escherichia coli MS 69-1] gi|331655487|ref|ZP_08356480.1| hydroxymethylbilane synthase [Escherichia coli M718] gi|331675273|ref|ZP_08376024.1| hydroxymethylbilane synthase [Escherichia coli TA280] gi|12518669|gb|AAG58997.1|AE005611_7 porphobilinogen deaminase = hydroxymethylbilane synthase [Escherichia coli O157:H7 str. EDL933] gi|13364211|dbj|BAB38158.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. Sakai] gi|209753308|gb|ACI74961.1| adenylate cyclase [Escherichia coli] gi|209753310|gb|ACI74962.1| adenylate cyclase [Escherichia coli] gi|209753312|gb|ACI74963.1| adenylate cyclase [Escherichia coli] gi|209753316|gb|ACI74965.1| adenylate cyclase [Escherichia coli] gi|300355863|gb|EFJ71733.1| porphobilinogen deaminase [Escherichia coli MS 198-1] gi|300395875|gb|EFJ79413.1| porphobilinogen deaminase [Escherichia coli MS 69-1] gi|320660969|gb|EFX28412.1| porphobilinogen deaminase [Escherichia coli O55:H7 str. USDA 5905] gi|331046808|gb|EGI18892.1| hydroxymethylbilane synthase [Escherichia coli M718] gi|331067559|gb|EGI38963.1| hydroxymethylbilane synthase [Escherichia coli TA280] Length = 320 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|253775572|ref|YP_003038403.1| porphobilinogen deaminase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|300930031|ref|ZP_07145463.1| porphobilinogen deaminase [Escherichia coli MS 187-1] gi|253326616|gb|ACT31218.1| porphobilinogen deaminase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|300462064|gb|EFK25557.1| porphobilinogen deaminase [Escherichia coli MS 187-1] Length = 320 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|311281516|ref|YP_003943747.1| porphobilinogen deaminase [Enterobacter cloacae SCF1] gi|308750711|gb|ADO50463.1| porphobilinogen deaminase [Enterobacter cloacae SCF1] Length = 318 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDKVLRIATRQSPLALWQAHYVKDRLTACH--PGLQVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL ++ RED RD F+S+ SL Sbjct: 64 KGLFVKELELALLEHRADIAVHSMKDVPVEFPQGLGLTTICEREDPRDAFVSNQYASLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAAQRPDLVIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L+ E P+ GQGA+ IE +++ + L+ +NH +T V ERA L Sbjct: 184 LESRIRQALSPEQSLPAVGQGAVGIECRLDDDATRALLAPLNHPETAVRVGAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G L+ +V A DG R G +A +G A+ + Sbjct: 244 EGGCQVPIGSYAELQGGELWLRALVGAPDGSRMVRGERRGTPEEAERLGVSLAEELLDNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|91227534|ref|ZP_01261871.1| porphobilinogen deaminase [Vibrio alginolyticus 12G01] gi|91188558|gb|EAS74850.1| porphobilinogen deaminase [Vibrio alginolyticus 12G01] Length = 312 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 111/304 (36%), Positives = 169/304 (55%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++GGK Sbjct: 3 QSTPIRIATRKSPLALWQAYFVKDALQAAH--PSLEVELVTMVTKGDVILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + +L Sbjct: 61 GLFVKELEIAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSHIDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRLK Sbjct: 121 PQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+ Sbjct: 181 EERIRSFIEPEQSLPAVGQGAVGIECRLDDERLLKLLEPLNHQDTVDRVLCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I +A G ++ +V DG G+R D +G A + Sbjct: 241 GGCQVPIGSYALLDGDNIWLRALVGEPDGSEIVRGEIRGHRKDGEALGVQLANELLDNGA 300 Query: 302 KNVF 305 + + Sbjct: 301 REIL 304 >gi|288937772|ref|YP_003441831.1| porphobilinogen deaminase [Klebsiella variicola At-22] gi|288892481|gb|ADC60799.1| porphobilinogen deaminase [Klebsiella variicola At-22] Length = 318 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +I TR SPLAL A ++ L H P N+ ++P+ T+GD I + L ++GG Sbjct: 6 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLNVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + R+D RD F+S+ S+ + Sbjct: 64 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYASIDE 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRLK Sbjct: 124 LPAGSVVGTSSLRRQCQLAATRPDLVIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLK 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L+ E P+ GQGA+ IE +++ Q L+ +NH +T V ERA L Sbjct: 184 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTQALLAPLNHAETAVRVRAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A L+ +V A DG R G A +G A+ + Sbjct: 244 EGGCQVPIGSYAELVNGELWLRALVGAPDGSQMVRGERRGPAEQAEALGISLAEELLDNG 303 Query: 301 NKNVF 305 +++ Sbjct: 304 ARDIL 308 >gi|187776117|ref|ZP_02800653.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4196] gi|188025006|ref|ZP_02775407.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4113] gi|189010242|ref|ZP_02805709.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4076] gi|189401833|ref|ZP_02778707.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4401] gi|189403100|ref|ZP_02793091.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4486] gi|189404376|ref|ZP_02788935.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4501] gi|189404861|ref|ZP_02811648.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC869] gi|208806069|ref|ZP_03248406.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4206] gi|208812922|ref|ZP_03254251.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4045] gi|208819553|ref|ZP_03259873.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4042] gi|209396873|ref|YP_002273321.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4115] gi|217324566|ref|ZP_03440650.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. TW14588] gi|261225578|ref|ZP_05939859.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. FRIK2000] gi|261255624|ref|ZP_05948157.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. FRIK966] gi|187768841|gb|EDU32685.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4196] gi|188015439|gb|EDU53561.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4113] gi|189001539|gb|EDU70525.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4076] gi|189359021|gb|EDU77440.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4401] gi|189362764|gb|EDU81183.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4486] gi|189365984|gb|EDU84400.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4501] gi|189373238|gb|EDU91654.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC869] gi|208725870|gb|EDZ75471.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4206] gi|208734199|gb|EDZ82886.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4045] gi|208739676|gb|EDZ87358.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4042] gi|209158273|gb|ACI35706.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4115] gi|217320787|gb|EEC29211.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. TW14588] gi|320191103|gb|EFW65753.1| Porphobilinogen deaminase [Escherichia coli O157:H7 str. EC1212] gi|320666093|gb|EFX33107.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. LSU-61] gi|326344260|gb|EGD68020.1| Porphobilinogen deaminase [Escherichia coli O157:H7 str. 1125] gi|326347912|gb|EGD71626.1| Porphobilinogen deaminase [Escherichia coli O157:H7 str. 1044] Length = 318 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|157163278|ref|YP_001460596.1| porphobilinogen deaminase [Escherichia coli HS] gi|170022172|ref|YP_001727126.1| porphobilinogen deaminase [Escherichia coli ATCC 8739] gi|188494806|ref|ZP_03002076.1| porphobilinogen deaminase [Escherichia coli 53638] gi|254039017|ref|ZP_04873068.1| porphobilinogen deaminase [Escherichia sp. 1_1_43] gi|300950432|ref|ZP_07164354.1| porphobilinogen deaminase [Escherichia coli MS 116-1] gi|300955191|ref|ZP_07167588.1| porphobilinogen deaminase [Escherichia coli MS 175-1] gi|301646129|ref|ZP_07246029.1| porphobilinogen deaminase [Escherichia coli MS 146-1] gi|331644538|ref|ZP_08345658.1| hydroxymethylbilane synthase [Escherichia coli H736] gi|157068958|gb|ABV08213.1| porphobilinogen deaminase [Escherichia coli HS] gi|169757100|gb|ACA79799.1| porphobilinogen deaminase [Escherichia coli ATCC 8739] gi|188490005|gb|EDU65108.1| porphobilinogen deaminase [Escherichia coli 53638] gi|226838708|gb|EEH70736.1| porphobilinogen deaminase [Escherichia sp. 1_1_43] gi|260451352|gb|ACX41774.1| porphobilinogen deaminase [Escherichia coli DH1] gi|300317908|gb|EFJ67692.1| porphobilinogen deaminase [Escherichia coli MS 175-1] gi|300450239|gb|EFK13859.1| porphobilinogen deaminase [Escherichia coli MS 116-1] gi|301075655|gb|EFK90461.1| porphobilinogen deaminase [Escherichia coli MS 146-1] gi|315138381|dbj|BAJ45540.1| porphobilinogen deaminase [Escherichia coli DH1] gi|331036210|gb|EGI08445.1| hydroxymethylbilane synthase [Escherichia coli H736] Length = 320 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|194438640|ref|ZP_03070728.1| porphobilinogen deaminase [Escherichia coli 101-1] gi|194422444|gb|EDX38443.1| porphobilinogen deaminase [Escherichia coli 101-1] Length = 318 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|238760184|ref|ZP_04621331.1| Porphobilinogen deaminase [Yersinia aldovae ATCC 35236] gi|238701620|gb|EEP94190.1| Porphobilinogen deaminase [Yersinia aldovae ATCC 35236] Length = 313 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P GL + R+D RD F+S L D Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIAFPDGLGLVTICERDDPRDAFVSSHFAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + HAI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLVIRDLRGNVGTRLAKLDKGEYHAIILAVAGLNRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH DT V ERA L Sbjct: 179 LETRIRYAMPAEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRDTELRVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G TL+ +V A DG R G +A +G + A + Sbjct: 239 EGGCQVPIGSYAELDGDTLWLRALVGAPDGSEIIRGERRGPVANAEQMGIELADELLSRG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|170680193|ref|YP_001746121.1| porphobilinogen deaminase [Escherichia coli SMS-3-5] gi|170517911|gb|ACB16089.1| porphobilinogen deaminase [Escherichia coli SMS-3-5] Length = 318 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +SL Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYESLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|291285218|ref|YP_003502036.1| Porphobilinogen deaminase [Escherichia coli O55:H7 str. CB9615] gi|209753314|gb|ACI74964.1| adenylate cyclase [Escherichia coli] gi|290765091|gb|ADD59052.1| Porphobilinogen deaminase [Escherichia coli O55:H7 str. CB9615] Length = 320 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + GL + RED RD F+S+ SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPHGLGLVTICEREDPRDAFVSNNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|308188851|ref|YP_003932982.1| Porphobilinogen deaminase [Pantoea vagans C9-1] gi|308059361|gb|ADO11533.1| Porphobilinogen deaminase [Pantoea vagans C9-1] Length = 317 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 168/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K FRI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG Sbjct: 5 MLDKIFRIATRQSPLALWQAHYVQQRLMSAH--PGLRVELVPMVTKGDIILDTPLAKVGG 62 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E + G D AVHS KD+P +GL + R+D RD F+SH S+ Sbjct: 63 KGLFVKELELAMQDGRADMAVHSMKDVPVSFPEGLGLVTICERDDPRDAFVSHHYDSIDA 122 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 123 LPQGAVVGTSSLRRQCQISARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 182 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I++ + E P+ GQGA+ IE +N+ +L++ +NH+DT V ERA L Sbjct: 183 MQDRIRQAMPAEVSLPAVGQGAVGIECRLNDSVLIDLLRALNHDDTEVCVRAERAMNTRL 242 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA +G L+ G+V A DG++ R G R A +G A + Sbjct: 243 EGGCQVPIGSFAVLEGDELWLRGMVGAPDGRVMVSGERRGPRAQAEQMGISLADELLNGG 302 Query: 301 NKNVF 305 + + Sbjct: 303 AREIL 307 >gi|215489131|ref|YP_002331562.1| porphobilinogen deaminase [Escherichia coli O127:H6 str. E2348/69] gi|215267203|emb|CAS11651.1| hydroxymethylbilane synthase HemC [Escherichia coli O127:H6 str. E2348/69] Length = 320 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|307140503|ref|ZP_07499859.1| porphobilinogen deaminase [Escherichia coli H736] Length = 318 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|193067963|ref|ZP_03048928.1| porphobilinogen deaminase [Escherichia coli E110019] gi|192958583|gb|EDV89021.1| porphobilinogen deaminase [Escherichia coli E110019] Length = 318 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|238789375|ref|ZP_04633161.1| Porphobilinogen deaminase [Yersinia frederiksenii ATCC 33641] gi|238722518|gb|EEQ14172.1| Porphobilinogen deaminase [Yersinia frederiksenii ATCC 33641] Length = 313 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQDLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S L D Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSPNYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH +T V ERA L Sbjct: 179 LETRIRSAMPAEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRETELRVCAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G L+ +V A DG R G A +G + A + Sbjct: 239 EGGCQVPIGSYAELEGDILWLRALVGAPDGSEIIRGERRGPAQHAEQMGIELADELLSRG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|317494824|ref|ZP_07953235.1| porphobilinogen deaminase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917149|gb|EFV38497.1| porphobilinogen deaminase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 323 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 113/304 (37%), Positives = 164/304 (53%), Gaps = 2/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RI TR SPLAL A+ R L P + ++P+ T+GD + + L ++GGKG Sbjct: 13 NQTLRIATRQSPLALWQAYYVRDHLQA--HWPDLTVELVPMVTRGDVLLDTPLAKVGGKG 70 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L+DL Sbjct: 71 LFVKELELALLDGRADIAVHSMKDVPVAFPEGLGLVTICEREDPRDAFVSPKYARLEDLP 130 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S++GTSSLRR+ L R D+ V D RG + TRL KL+N AI+LA AG+KRL+ E Sbjct: 131 EGSIVGTSSLRRQCQLREIRPDLIVRDLRGNVGTRLAKLDNGDYDAIILAAAGLKRLELE 190 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ L E P+ GQGA+ IE +N+ + Q L+ +N DT V+ ERA L+G Sbjct: 191 ERIRYALPPEQSLPAVGQGAVGIECRLNDTRTQALLAPLNDIDTATRVSAERAMNTRLEG 250 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I ++ G ++ +V DG + R G R A +G A+ + + Sbjct: 251 GCQVPIGSYSELNGDEIWLRALVGKPDGTLIIRGERRGPRAKAAELGVSLAEELLERGAR 310 Query: 303 NVFN 306 + Sbjct: 311 EILE 314 >gi|310766129|gb|ADP11079.1| porphobilinogen deaminase [Erwinia sp. Ejp617] Length = 313 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 173/305 (56%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L+D H P + ++P+ T+GD I + L ++GG Sbjct: 1 MSDKILRIATRKSPLALWQAKYVQQRLIDCH--PGLRVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++SG D AVHS KD+P +GL + A R+D D F+S+ S+ Sbjct: 59 KGLFVKELEQAMLSGSADIAVHSMKDVPVAFPQGLGLVAICERDDPHDAFVSNRHASVDS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPQGAIVGTSSLRRQCQLSARRPDLVIHSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I++++ E+ P+ GQGA+ IE +++ L+ +NH++T V+ ERA L Sbjct: 179 LSDRIRQVMPAEESLPAVGQGAVGIECRLDDMHTIGLLAALNHDETACRVSAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G L+ G+V + DG R G+R DA +G A+ + Sbjct: 239 EGGCQVPIGSYALLEGDQLWLRGLVGSPDGSQMVRGERRGSRADAEKMGISLAEELLDNG 298 Query: 301 NKNVF 305 +++ Sbjct: 299 ARDIL 303 >gi|227357162|ref|ZP_03841531.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Proteus mirabilis ATCC 29906] gi|227162694|gb|EEI47661.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Proteus mirabilis ATCC 29906] Length = 313 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A + L H P + ++P+ TKGD I + L ++GG Sbjct: 1 MPKSTIRIATRQSPLAMWQALYVKEQLQIAH--PSLVVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+S D AVHS KD+P +GL + RED RD F+S+ SL+ Sbjct: 59 KGLFVKELELALLSSRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYDSLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL+KL+N AI+LA AG+KRLK Sbjct: 119 LPAGSVVGTSSLRRQCQLKALRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ E P+ GQGA+ IE +++ Q L+ +NH DT V ERA L Sbjct: 179 LTERIRSSLSAEQSLPAVGQGAVGIECRLDDHDTQALLAALNHADTATCVKAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + ++ +V + DGK R + DA G A+ + Sbjct: 239 EGGCQVPIGSYAIWQNDKIWLRALVGSPDGKTILRGERLVSPEDAEQAGISLAEELLDKG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|320197614|gb|EFW72226.1| Porphobilinogen deaminase [Escherichia coli WV_060327] Length = 318 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|82546156|ref|YP_410103.1| porphobilinogen deaminase [Shigella boydii Sb227] gi|300904058|ref|ZP_07121938.1| porphobilinogen deaminase [Escherichia coli MS 84-1] gi|301303699|ref|ZP_07209820.1| porphobilinogen deaminase [Escherichia coli MS 124-1] gi|81247567|gb|ABB68275.1| porphobilinogen deaminase [Shigella boydii Sb227] gi|300403938|gb|EFJ87476.1| porphobilinogen deaminase [Escherichia coli MS 84-1] gi|300840999|gb|EFK68759.1| porphobilinogen deaminase [Escherichia coli MS 124-1] gi|315254168|gb|EFU34136.1| porphobilinogen deaminase [Escherichia coli MS 85-1] gi|315296783|gb|EFU56075.1| porphobilinogen deaminase [Escherichia coli MS 16-3] Length = 320 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|330827978|ref|YP_004390930.1| Porphobilinogen deaminase [Aeromonas veronii B565] gi|328803114|gb|AEB48313.1| Porphobilinogen deaminase [Aeromonas veronii B565] Length = 330 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +I TR SPLAL A + L +H P + ++P+ST+GD+I + L ++GG Sbjct: 22 MAARTLKIATRKSPLALWQANFVKDRLEALH--PQLQVELVPMSTQGDKILDTPLAKVGG 79 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ +++ + Sbjct: 80 KGLFVKELETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFKAIAE 139 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 140 LPQGAVVGTSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLE 199 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I + E P+ GQGA+ IE +++ + L+ + H +T V ERA L Sbjct: 200 MAHRITAFIEPEQSLPANGQGAVGIECRLDDVELHALLAPLEHTETRARVLTERAMNRAL 259 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ G+V + DG G D +G AQ + Sbjct: 260 QGGCQVPIGAYALVEGEQIWLRGLVGSPDGTQVIRDEIRGPLADGEALGEQLAQRLLAAG 319 Query: 301 NKNVF 305 + Sbjct: 320 ADEIL 324 >gi|91213326|ref|YP_543312.1| porphobilinogen deaminase [Escherichia coli UTI89] gi|117626062|ref|YP_859385.1| porphobilinogen deaminase [Escherichia coli APEC O1] gi|237702812|ref|ZP_04533293.1| porphobilinogen deaminase [Escherichia sp. 3_2_53FAA] gi|91074900|gb|ABE09781.1| porphobilinogen deaminase [Escherichia coli UTI89] gi|115515186|gb|ABJ03261.1| porphobilinogen deaminase [Escherichia coli APEC O1] gi|226902983|gb|EEH89242.1| porphobilinogen deaminase [Escherichia sp. 3_2_53FAA] gi|294490567|gb|ADE89323.1| porphobilinogen deaminase [Escherichia coli IHE3034] gi|307628866|gb|ADN73170.1| porphobilinogen deaminase [Escherichia coli UM146] gi|315284723|gb|EFU44168.1| porphobilinogen deaminase [Escherichia coli MS 110-3] Length = 320 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICKREDPRDAFVSNTYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|117559297|gb|ABK36245.1| porphobilinogen deaminase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 330 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 162/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +I TR SPLAL A + L ++ P + ++P+ST+GD+I + L ++GG Sbjct: 22 MAARTLKIATRKSPLALWQANFVKDRLEALY--PELQVELVPMSTQGDKILDTPLAKVGG 79 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ + + Sbjct: 80 KGLFVKELETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFGQIDE 139 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 140 LPQGAVVGTSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLE 199 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I + E P+ GQGA+ IE +++ + L+ + H +T V ERA L Sbjct: 200 MAHRITAFIEPEQSLPANGQGAVGIECRLDDHELHALLAPLEHPETRIRVLTERAMNRAL 259 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ G+V + DG G D +G AQ + Sbjct: 260 QGGCQVPIGAYALVQGEEVWLRGLVGSPDGSRVIRDEIRGPLADGEALGHTLAQRLLADG 319 Query: 301 NKNVF 305 + Sbjct: 320 ADVIL 324 >gi|157156845|ref|YP_001465286.1| porphobilinogen deaminase [Escherichia coli E24377A] gi|300818726|ref|ZP_07098933.1| porphobilinogen deaminase [Escherichia coli MS 107-1] gi|300823336|ref|ZP_07103467.1| porphobilinogen deaminase [Escherichia coli MS 119-7] gi|300921486|ref|ZP_07137834.1| porphobilinogen deaminase [Escherichia coli MS 115-1] gi|300923304|ref|ZP_07139352.1| porphobilinogen deaminase [Escherichia coli MS 182-1] gi|301328438|ref|ZP_07221519.1| porphobilinogen deaminase [Escherichia coli MS 78-1] gi|307313621|ref|ZP_07593241.1| porphobilinogen deaminase [Escherichia coli W] gi|331679912|ref|ZP_08380575.1| hydroxymethylbilane synthase [Escherichia coli H591] gi|332282690|ref|ZP_08395103.1| porphobilinogen deaminase [Shigella sp. D9] gi|157078875|gb|ABV18583.1| porphobilinogen deaminase [Escherichia coli E24377A] gi|300411603|gb|EFJ94913.1| porphobilinogen deaminase [Escherichia coli MS 115-1] gi|300420390|gb|EFK03701.1| porphobilinogen deaminase [Escherichia coli MS 182-1] gi|300524122|gb|EFK45191.1| porphobilinogen deaminase [Escherichia coli MS 119-7] gi|300528692|gb|EFK49754.1| porphobilinogen deaminase [Escherichia coli MS 107-1] gi|300845148|gb|EFK72908.1| porphobilinogen deaminase [Escherichia coli MS 78-1] gi|306906602|gb|EFN37114.1| porphobilinogen deaminase [Escherichia coli W] gi|315063097|gb|ADT77424.1| hydroxymethylbilane synthase [Escherichia coli W] gi|324016226|gb|EGB85445.1| porphobilinogen deaminase [Escherichia coli MS 117-3] gi|331072459|gb|EGI43791.1| hydroxymethylbilane synthase [Escherichia coli H591] gi|332105042|gb|EGJ08388.1| porphobilinogen deaminase [Shigella sp. D9] Length = 320 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G +A +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|218701284|ref|YP_002408913.1| porphobilinogen deaminase [Escherichia coli IAI39] gi|226740634|sp|B7NTE0|HEM3_ECO7I RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|218371270|emb|CAR19104.1| hydroxymethylbilane synthase [Escherichia coli IAI39] Length = 313 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|194434066|ref|ZP_03066336.1| porphobilinogen deaminase [Shigella dysenteriae 1012] gi|194417724|gb|EDX33823.1| porphobilinogen deaminase [Shigella dysenteriae 1012] gi|320176046|gb|EFW51115.1| Porphobilinogen deaminase [Shigella dysenteriae CDC 74-1112] Length = 318 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|165976435|ref|YP_001652028.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190150336|ref|YP_001968861.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303251057|ref|ZP_07337243.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253601|ref|ZP_07339739.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307245920|ref|ZP_07528003.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307248006|ref|ZP_07530035.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307252646|ref|ZP_07534539.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307257056|ref|ZP_07538831.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307259334|ref|ZP_07541061.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307261494|ref|ZP_07543163.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263677|ref|ZP_07545286.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|165876536|gb|ABY69584.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189915467|gb|ACE61719.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302647521|gb|EFL77739.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650067|gb|EFL80237.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306853139|gb|EFM85361.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306855404|gb|EFM87578.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306859891|gb|EFM91911.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306864427|gb|EFM96335.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306866570|gb|EFM98431.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306868777|gb|EFN00585.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870990|gb|EFN02725.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 314 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 110/303 (36%), Positives = 163/303 (53%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR SPLAL A + L + P ++ ++ + TKGD I + L +IGGKG Sbjct: 7 KDTLRIATRQSPLALWQANFVKDELEK--RFPELSVELVTMVTKGDVILDTPLAKIGGKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L Sbjct: 65 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDELP 124 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 125 AGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMP 184 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ +++E P+ GQGA+ IET V++ + + +NH T V ERA L G Sbjct: 185 ERIRSFISVEQSLPAAGQGAVGIETRVDDERVLNYLATLNHNPTACCVIAERAMNTRLQG 244 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I GFA G+ + +V A DG S +R +A +G A+ + Sbjct: 245 GCQVPIGGFATLNGNEITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQLLAQGAD 304 Query: 303 NVF 305 + Sbjct: 305 KIL 307 >gi|238798585|ref|ZP_04642061.1| Porphobilinogen deaminase [Yersinia mollaretii ATCC 43969] gi|238717541|gb|EEQ09381.1| Porphobilinogen deaminase [Yersinia mollaretii ATCC 43969] Length = 313 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S L D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSSHYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH DT V ERA L Sbjct: 179 LETRIRYAMPAEESLPAVGQGAVGIECRLDDDVTRQLLAPLNHRDTELRVCAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G L+ +V A DG R G +A +G + A + Sbjct: 239 EGGCQVPIGSYAELAGGELWLRALVGAPDGSEIIRGERRGPAENAEQMGIELADELLSRG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|32033974|ref|ZP_00134230.1| COG0181: Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 314 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 111/303 (36%), Positives = 163/303 (53%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR SPLAL A + L + P ++ ++ + TKGD I + L +IGGKG Sbjct: 7 KDTLRIATRQSPLALWQANFVKDELEK--RFPELSVELVTMVTKGDVILDTPLAKIGGKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L Sbjct: 65 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDELP 124 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 125 AGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMP 184 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ +++E P+ GQGA+ IET VN+ + + +NH T V ERA L G Sbjct: 185 ERIRSFISVEQSLPAAGQGAVGIETRVNDERVLNYLATLNHNPTACCVIAERAMNTRLQG 244 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I GFA G+ + +V A DG S +R +A +G A+ + Sbjct: 245 GCQVPIGGFATLNGNEITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQLLAQGAD 304 Query: 303 NVF 305 + Sbjct: 305 KIL 307 >gi|84393564|ref|ZP_00992318.1| porphobilinogen deaminase [Vibrio splendidus 12B01] gi|84375843|gb|EAP92736.1| porphobilinogen deaminase [Vibrio splendidus 12B01] Length = 312 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 111/301 (36%), Positives = 171/301 (56%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++GGKGLF Sbjct: 6 PIRIATRKSPLALWQAYFVRDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ G D AVHS KD+P KGL + RED RD F+S+T ++ +L Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPKGLGLVTICEREDPRDAFVSNTYNNIDELPQG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT SLRR+ LL +R D+ + + RG + TRL KL++ + AI+LA AG+KRL+ E+ Sbjct: 124 AAVGTCSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRLELEER 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA L+G C Sbjct: 184 IRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLTLEGGC 243 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I ++ G ++ +V DG +G R DA +G A + + + Sbjct: 244 QVPIGSYSLLDGDNIWLRALVGEPDGSKMVRGEISGLRKDAEALGVTLANQLLDDGAREI 303 Query: 305 F 305 Sbjct: 304 L 304 >gi|193065671|ref|ZP_03046736.1| porphobilinogen deaminase [Escherichia coli E22] gi|194429243|ref|ZP_03061771.1| porphobilinogen deaminase [Escherichia coli B171] gi|192926638|gb|EDV81267.1| porphobilinogen deaminase [Escherichia coli E22] gi|194412755|gb|EDX29049.1| porphobilinogen deaminase [Escherichia coli B171] gi|320198489|gb|EFW73090.1| Porphobilinogen deaminase [Escherichia coli EC4100B] Length = 318 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G +A +G A+ + Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|323964049|gb|EGB59539.1| porphobilinogen deaminase [Escherichia coli M863] gi|327250654|gb|EGE62360.1| porphobilinogen deaminase [Escherichia coli STEC_7v] Length = 313 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +N+ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLNDTRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|168801133|ref|ZP_02826140.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC508] gi|195938092|ref|ZP_03083474.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4024] gi|218707439|ref|YP_002414958.1| porphobilinogen deaminase [Escherichia coli UMN026] gi|254795801|ref|YP_003080638.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. TW14359] gi|293413246|ref|ZP_06655908.1| porphobilinogen deaminase [Escherichia coli B354] gi|298383172|ref|ZP_06992766.1| hydroxymethylbilane synthase [Escherichia coli FVEC1302] gi|331665450|ref|ZP_08366349.1| hydroxymethylbilane synthase [Escherichia coli TA143] gi|23821693|sp|Q8XAP3|HEM3_ECO57 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226740636|sp|B7NFA7|HEM3_ECOLU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189376679|gb|EDU95095.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC508] gi|218434536|emb|CAR15462.1| hydroxymethylbilane synthase [Escherichia coli UMN026] gi|254595201|gb|ACT74562.1| hydroxymethylbilane synthase [Escherichia coli O157:H7 str. TW14359] gi|284923908|emb|CBG37007.1| porphobilinogen deaminase [Escherichia coli 042] gi|291468194|gb|EFF10691.1| porphobilinogen deaminase [Escherichia coli B354] gi|298276408|gb|EFI17927.1| hydroxymethylbilane synthase [Escherichia coli FVEC1302] gi|320639287|gb|EFX08909.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. G5101] gi|320644672|gb|EFX13722.1| porphobilinogen deaminase [Escherichia coli O157:H- str. 493-89] gi|320649997|gb|EFX18500.1| porphobilinogen deaminase [Escherichia coli O157:H- str. H 2687] gi|320655343|gb|EFX23285.1| porphobilinogen deaminase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|323974386|gb|EGB69514.1| porphobilinogen deaminase [Escherichia coli TW10509] gi|331057348|gb|EGI29337.1| hydroxymethylbilane synthase [Escherichia coli TA143] Length = 313 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|332998254|gb|EGK17856.1| porphobilinogen deaminase [Shigella flexneri K-272] gi|333013794|gb|EGK33157.1| porphobilinogen deaminase [Shigella flexneri K-227] Length = 313 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|187733255|ref|YP_001882498.1| porphobilinogen deaminase [Shigella boydii CDC 3083-94] gi|187430247|gb|ACD09521.1| porphobilinogen deaminase [Shigella boydii CDC 3083-94] Length = 320 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMTSH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|206580079|ref|YP_002241132.1| porphobilinogen deaminase [Klebsiella pneumoniae 342] gi|290513167|ref|ZP_06552529.1| porphobilinogen deaminase [Klebsiella sp. 1_1_55] gi|226706289|sp|B5XYL1|HEM3_KLEP3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|206569137|gb|ACI10913.1| porphobilinogen deaminase [Klebsiella pneumoniae 342] gi|289774378|gb|EFD82384.1| porphobilinogen deaminase [Klebsiella sp. 1_1_55] Length = 313 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +I TR SPLAL A ++ L H P N+ ++P+ T+GD I + L ++GG Sbjct: 1 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLNVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + R+D RD F+S+ S+ + Sbjct: 59 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYASIDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRLK Sbjct: 119 LPAGSVVGTSSLRRQCQLAATRPDLVIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L+ E P+ GQGA+ IE +++ Q L+ +NH +T V ERA L Sbjct: 179 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTQALLAPLNHAETAVRVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A L+ +V A DG R G A +G A+ + Sbjct: 239 EGGCQVPIGSYAELVNGELWLRALVGAPDGSQMVRGERRGPAEQAEALGISLAEELLDNG 298 Query: 301 NKNVF 305 +++ Sbjct: 299 ARDIL 303 >gi|254163746|ref|YP_003046854.1| porphobilinogen deaminase [Escherichia coli B str. REL606] gi|242379335|emb|CAQ34146.1| hydroxymethylbilane synthase [Escherichia coli BL21(DE3)] gi|253975647|gb|ACT41318.1| porphobilinogen deaminase [Escherichia coli B str. REL606] gi|253979803|gb|ACT45473.1| porphobilinogen deaminase [Escherichia coli BL21(DE3)] gi|323959059|gb|EGB54728.1| porphobilinogen deaminase [Escherichia coli H489] gi|323969355|gb|EGB64654.1| porphobilinogen deaminase [Escherichia coli TA007] Length = 313 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|161505549|ref|YP_001572661.1| porphobilinogen deaminase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189028154|sp|A9MJ10|HEM3_SALAR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|160866896|gb|ABX23519.1| hypothetical protein SARI_03714 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 313 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 159/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +I TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLKIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D Sbjct: 59 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNQYHSLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ L E P+ GQGAI IE +++ + L+ +NH T V ERA L Sbjct: 179 LASRIRTALPPEVSLPAVGQGAIGIECRLDDARTHALLAPLNHPQTALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG + R G+ A +G A+ + Sbjct: 239 EGGCQVPIGSYAEIFNGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARAIL 303 >gi|26250543|ref|NP_756583.1| porphobilinogen deaminase [Escherichia coli CFT073] gi|110644128|ref|YP_671858.1| porphobilinogen deaminase [Escherichia coli 536] gi|227888613|ref|ZP_04006418.1| hydroxymethylbilane synthase [Escherichia coli 83972] gi|300979364|ref|ZP_07174522.1| porphobilinogen deaminase [Escherichia coli MS 200-1] gi|300985714|ref|ZP_07177569.1| porphobilinogen deaminase [Escherichia coli MS 45-1] gi|301047316|ref|ZP_07194402.1| porphobilinogen deaminase [Escherichia coli MS 185-1] gi|26110973|gb|AAN83157.1|AE016769_272 Porphobilinogen deaminase [Escherichia coli CFT073] gi|110345720|gb|ABG71957.1| porphobilinogen deaminase [Escherichia coli 536] gi|227834452|gb|EEJ44918.1| hydroxymethylbilane synthase [Escherichia coli 83972] gi|300300835|gb|EFJ57220.1| porphobilinogen deaminase [Escherichia coli MS 185-1] gi|300308036|gb|EFJ62556.1| porphobilinogen deaminase [Escherichia coli MS 200-1] gi|300407988|gb|EFJ91526.1| porphobilinogen deaminase [Escherichia coli MS 45-1] gi|307555929|gb|ADN48704.1| porphobilinogen deaminase [Escherichia coli ABU 83972] gi|315293155|gb|EFU52507.1| porphobilinogen deaminase [Escherichia coli MS 153-1] gi|324007476|gb|EGB76695.1| porphobilinogen deaminase [Escherichia coli MS 57-2] gi|324014708|gb|EGB83927.1| porphobilinogen deaminase [Escherichia coli MS 60-1] Length = 320 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|162419364|ref|YP_001605129.1| porphobilinogen deaminase [Yersinia pestis Angola] gi|238059008|sp|A9R8K0|HEM3_YERPG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|162352179|gb|ABX86127.1| porphobilinogen deaminase [Yersinia pestis Angola] Length = 313 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 117/305 (38%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L Sbjct: 179 LENRIRYAMSAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G TL+ +V A DG R G +A +G + A + + Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELADELLSLG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|49176416|ref|YP_026260.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr. MG1655] gi|89110215|ref|AP_003995.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr. W3110] gi|170083288|ref|YP_001732608.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr. DH10B] gi|238902882|ref|YP_002928678.1| hydroxymethylbilane synthase [Escherichia coli BW2952] gi|256026151|ref|ZP_05440016.1| porphobilinogen deaminase [Escherichia sp. 4_1_40B] gi|312971913|ref|ZP_07786087.1| porphobilinogen deaminase [Escherichia coli 1827-70] gi|2506504|sp|P06983|HEM3_ECOLI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|229836108|sp|B1XAH2|HEM3_ECODH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|259647795|sp|C4ZZ69|HEM3_ECOBW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|4388845|pdb|2YPN|A Chain A, Hydroxymethylbilane Synthase gi|28373294|pdb|1GTK|A Chain A, Time-Resolved And Static-Ensemble Structural Chemistry Of Hydroxymethylbilane Synthase gi|41666|emb|CAA31132.1| unnamed protein product [Escherichia coli] gi|48994974|gb|AAT48218.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr. MG1655] gi|85676246|dbj|BAE77496.1| hydroxymethylbilane synthase [Escherichia coli str. K12 substr. W3110] gi|169891123|gb|ACB04830.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr. DH10B] gi|238861470|gb|ACR63468.1| hydroxymethylbilane synthase [Escherichia coli BW2952] gi|309704240|emb|CBJ03588.1| porphobilinogen deaminase [Escherichia coli ETEC H10407] gi|310334290|gb|EFQ00495.1| porphobilinogen deaminase [Escherichia coli 1827-70] gi|315618498|gb|EFU99084.1| porphobilinogen deaminase [Escherichia coli 3431] gi|323934193|gb|EGB30624.1| porphobilinogen deaminase [Escherichia coli E1520] gi|323938941|gb|EGB35160.1| porphobilinogen deaminase [Escherichia coli E482] gi|332345783|gb|AEE59117.1| porphobilinogen deaminase HemC [Escherichia coli UMNK88] Length = 313 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|315634981|ref|ZP_07890262.1| hydroxymethylbilane synthase [Aggregatibacter segnis ATCC 33393] gi|315476243|gb|EFU66994.1| hydroxymethylbilane synthase [Aggregatibacter segnis ATCC 33393] Length = 346 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 109/306 (35%), Positives = 165/306 (53%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M KK +I TR SPLAL A ++ L ++ P +I ++ + TKGD I + L +IGG Sbjct: 39 MFKKTLKIATRQSPLALWQANFVKARLQQLY--PDLSIELVTMVTKGDVILDSPLAKIGG 96 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L++ E D AVHS KD+P + +GL +S RED RD F+S+T ++L + Sbjct: 97 KGLFVKELENALLNNEADIAVHSMKDVPMQFPEGLGLSVICKREDPRDAFVSNTYRTLAE 156 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+ RL Sbjct: 157 LPPGAIVGTSSLRRQCQLKALRPDLEIRSLRGNVGTRLSKLDNGDFDAIILASAGLIRLG 216 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I + +E P+ GQGA+ IE N+ + ++L+ + +T V ERA L Sbjct: 217 LADRITSFIEVEQSLPAAGQGAVGIECRTNDEQVKQLLAPLADVETTYCVLAERAMNNRL 276 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I G+A + S L +V + DG +A +G A+ + Sbjct: 277 QGGCQVPIGGYAVLRESMLNLRALVGSVDGSTIIRAEGQSAVENAEILGVQIAEQLLAQG 336 Query: 301 NKNVFN 306 + Sbjct: 337 ADKILQ 342 >gi|237727921|ref|ZP_04558402.1| porphobilinogen deaminase [Citrobacter sp. 30_2] gi|226910370|gb|EEH96288.1| porphobilinogen deaminase [Citrobacter sp. 30_2] Length = 318 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDALMANH--PGLIVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + GL + RED RD F+S+ SL + Sbjct: 64 KGLFVKELEVALLEKRADIAVHSMKDVPVEFPDGLGLVTICEREDPRDAFVSNKYNSLDE 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L + R D+ + RG + TRL+KL+N AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAKRRPDLVIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E ++ L E P+ GQGA+ IE +++ + Q L+ +NHE+T V ERA L Sbjct: 184 LESRVRTALPPEVSLPAVGQGAVGIECRLDDMRTQALLAPLNHEETALRVKAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 EGGCQVPIGSYAEIIDGEIWLRALVGAPDGSQMVCGERRGATQDAEQMGISLAEELLENG 303 Query: 301 NKNVF 305 + + Sbjct: 304 ARAIL 308 >gi|191174267|ref|ZP_03035776.1| porphobilinogen deaminase [Escherichia coli F11] gi|190905450|gb|EDV65080.1| porphobilinogen deaminase [Escherichia coli F11] Length = 318 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|110807507|ref|YP_691027.1| porphobilinogen deaminase [Shigella flexneri 5 str. 8401] gi|110617055|gb|ABF05722.1| porphobilinogen deaminase [Shigella flexneri 5 str. 8401] gi|281603194|gb|ADA76178.1| Porphobilinogen deaminase [Shigella flexneri 2002017] Length = 320 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLCALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|77359075|ref|YP_338650.1| porphobilinogen deaminase [Pseudoalteromonas haloplanktis TAC125] gi|76873986|emb|CAI85207.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Pseudoalteromonas haloplanktis TAC125] Length = 312 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 107/307 (34%), Positives = 168/307 (54%), Gaps = 4/307 (1%) Query: 1 MEKKP--FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M + RI TR S LAL A ++ L H P + ++P+ST+GD I + L +I Sbjct: 1 MTQTTNIVRIATRKSALALWQAEFVKAQLEHYH--PGILVELVPMSTQGDIILDTPLAKI 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLF +E+E+ ++ G D AVHS KDMP + +GL + RED RD F+S+ ++ Sbjct: 59 GGKGLFVKELEQAMLEGLADMAVHSMKDMPVEFPEGLTLHTICEREDPRDAFVSNNFANI 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L +++GTSSLRR+ + R D+ + D RG + TRL KL++ + AI+LA AG+ R Sbjct: 119 DELPQGAIVGTSSLRRQCQIRASRPDLKIHDLRGNVNTRLAKLDSGQYDAIILAAAGLIR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L+ + I+ + E P+ GQGA+ IE ++ + L+ + H +T VN ERA Sbjct: 179 LEMKDRIRAYIEPEVSLPANGQGAVGIECRTDDEAIKALLAPLEHSETRIRVNAERAMNR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+G C+ I +A G ++ G+V A DG +G+ DA +G + A+ + Sbjct: 239 HLEGGCQVPIGAYALVNGDQVHLRGLVGAIDGSEILRDEVSGHVNDAEKLGVELAKMLLA 298 Query: 299 ISNKNVF 305 + Sbjct: 299 QGADRIL 305 >gi|219871198|ref|YP_002475573.1| porphobilinogen deaminase [Haemophilus parasuis SH0165] gi|219691402|gb|ACL32625.1| porphobilinogen deaminase [Haemophilus parasuis SH0165] Length = 309 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 166/303 (54%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ RI TR SPLAL A + +L + P ++ ++ + TKGD I + L +IGGKG Sbjct: 2 KEILRIATRQSPLALWQANFVKDALEQ--RFPQLSVELVTMVTKGDIILDTPLAKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ +L+ L Sbjct: 60 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNHYANLEALP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+ L+ + + RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 120 AGAVVGTSSLRRQCQLMAKYPHLQIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGLS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ + +E P+ GQGA+ IET +N+ + + +NH+ T V ERA + L G Sbjct: 180 ERIRTFIPVETSLPACGQGAVGIETRLNDERVLAYLAELNHQPTAYCVQAERAMNSRLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I GFA G + +V + DG S GN +A +G + A+ + Sbjct: 240 GCQVPIGGFATLTGDEIELNALVGSLDGSTIVRASAKGNIKEAEKLGVEVAEALLAKGAD 299 Query: 303 NVF 305 ++ Sbjct: 300 HIL 302 >gi|197287145|ref|YP_002153017.1| porphobilinogen deaminase [Proteus mirabilis HI4320] gi|238058999|sp|B4F1X3|HEM3_PROMH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|194684632|emb|CAR46538.1| porphobilinogen deaminase [Proteus mirabilis HI4320] Length = 313 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A + L H P + ++P+ TKGD I + L ++GG Sbjct: 1 MSKSTIRIATRQSPLAMWQALYVKEQLQIAH--PSLVVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+S D AVHS KD+P +GL + RED RD F+S+ SL+ Sbjct: 59 KGLFVKELELALLSSRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYDSLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL+KL+N AI+LA AG+KRLK Sbjct: 119 LPAGSVVGTSSLRRQCQLKALRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ E P+ GQGA+ IE +++ Q L+ +NH DT V ERA L Sbjct: 179 LTERIRSSLSAEQSLPAVGQGAVGIECRLDDHDTQALLAALNHADTATCVKAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + ++ +V + DG+ R + DA G A+ + Sbjct: 239 EGGCQVPIGSYAIWQNGKIWLRALVGSPDGETILRGERLVSPEDAEQAGISLAEELLDKG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|312969469|ref|ZP_07783671.1| porphobilinogen deaminase [Escherichia coli 2362-75] gi|312286016|gb|EFR13934.1| porphobilinogen deaminase [Escherichia coli 2362-75] Length = 313 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|238793582|ref|ZP_04637206.1| Porphobilinogen deaminase [Yersinia intermedia ATCC 29909] gi|238727172|gb|EEQ18702.1| Porphobilinogen deaminase [Yersinia intermedia ATCC 29909] Length = 313 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S + D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPVAFPEGLGLVTICERDDPRDAFVSPHFAHIDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ + E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L Sbjct: 179 LASRIRYAMPAEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRVTELRVCAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G+TL+ G+V A DG R G +A +G + A + Sbjct: 239 EGGCQVPIGSYAELEGNTLWLRGLVGAPDGSEIIRGERRGPAENAEQMGIELADELLSRG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARAIL 303 >gi|51594540|ref|YP_068731.1| porphobilinogen deaminase [Yersinia pseudotuberculosis IP 32953] gi|186893538|ref|YP_001870650.1| porphobilinogen deaminase [Yersinia pseudotuberculosis PB1/+] gi|61213379|sp|Q66G00|HEM3_YERPS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238059007|sp|B2K065|HEM3_YERPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|51587822|emb|CAH19424.1| porphobilinogen deaminase [Yersinia pseudotuberculosis IP 32953] gi|186696564|gb|ACC87193.1| porphobilinogen deaminase [Yersinia pseudotuberculosis PB1/+] Length = 313 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 118/305 (38%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + A RED RD F+S L D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVAICEREDPRDAFVSSHYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L Sbjct: 179 LETRIRYAMSAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G TL+ +V A DG R G +A +G + A + Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELADELLSRG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|108806170|ref|YP_650086.1| porphobilinogen deaminase [Yersinia pestis Antiqua] gi|108810280|ref|YP_646047.1| porphobilinogen deaminase [Yersinia pestis Nepal516] gi|145600717|ref|YP_001164793.1| porphobilinogen deaminase [Yersinia pestis Pestoides F] gi|153949991|ref|YP_001399195.1| porphobilinogen deaminase [Yersinia pseudotuberculosis IP 31758] gi|153997095|ref|ZP_02022228.1| porphobilinogen deaminase [Yersinia pestis CA88-4125] gi|161484901|ref|NP_667719.2| porphobilinogen deaminase [Yersinia pestis KIM 10] gi|161511325|ref|NP_994488.2| porphobilinogen deaminase [Yersinia pestis biovar Microtus str. 91001] gi|165926233|ref|ZP_02222065.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str. F1991016] gi|165939151|ref|ZP_02227702.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str. IP275] gi|166011678|ref|ZP_02232576.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str. E1979001] gi|166213633|ref|ZP_02239668.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str. B42003004] gi|167401822|ref|ZP_02307310.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421084|ref|ZP_02312837.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426299|ref|ZP_02318052.1| porphobilinogen deaminase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470637|ref|ZP_02335341.1| porphobilinogen deaminase [Yersinia pestis FV-1] gi|218930852|ref|YP_002348727.1| porphobilinogen deaminase [Yersinia pestis CO92] gi|229837182|ref|ZP_04457347.1| hydroxymethylbilane synthase [Yersinia pestis Pestoides A] gi|229839542|ref|ZP_04459701.1| hydroxymethylbilane synthase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229900105|ref|ZP_04515242.1| hydroxymethylbilane synthase [Yersinia pestis biovar Orientalis str. India 195] gi|229900449|ref|ZP_04515578.1| hydroxymethylbilane synthase [Yersinia pestis Nepal516] gi|270488804|ref|ZP_06205878.1| hydroxymethylbilane synthase [Yersinia pestis KIM D27] gi|294505512|ref|YP_003569574.1| porphobilinogen deaminase [Yersinia pestis Z176003] gi|17380441|sp|P46355|HEM3_YERPE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|122979815|sp|Q1CBN1|HEM3_YERPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123373560|sp|Q1CNI3|HEM3_YERPN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|158514109|sp|A4TRA8|HEM3_YERPP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|167008820|sp|A7FD67|HEM3_YERP3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|108773928|gb|ABG16447.1| hydroxymethylbilane synthase [Yersinia pestis Nepal516] gi|108778083|gb|ABG12141.1| hydroxymethylbilane synthase [Yersinia pestis Antiqua] gi|115349463|emb|CAL22436.1| porphobilinogen deaminase [Yersinia pestis CO92] gi|145212413|gb|ABP41820.1| hydroxymethylbilane synthase [Yersinia pestis Pestoides F] gi|149289401|gb|EDM39479.1| porphobilinogen deaminase [Yersinia pestis CA88-4125] gi|152961486|gb|ABS48947.1| porphobilinogen deaminase [Yersinia pseudotuberculosis IP 31758] gi|165912924|gb|EDR31550.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str. IP275] gi|165921757|gb|EDR38954.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str. F1991016] gi|165989447|gb|EDR41748.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str. E1979001] gi|166205306|gb|EDR49786.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str. B42003004] gi|166961213|gb|EDR57234.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048715|gb|EDR60123.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054818|gb|EDR64622.1| porphobilinogen deaminase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229682468|gb|EEO78555.1| hydroxymethylbilane synthase [Yersinia pestis Nepal516] gi|229686885|gb|EEO78964.1| hydroxymethylbilane synthase [Yersinia pestis biovar Orientalis str. India 195] gi|229695908|gb|EEO85955.1| hydroxymethylbilane synthase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706125|gb|EEO92134.1| hydroxymethylbilane synthase [Yersinia pestis Pestoides A] gi|262363578|gb|ACY60299.1| porphobilinogen deaminase [Yersinia pestis D106004] gi|262367506|gb|ACY64063.1| porphobilinogen deaminase [Yersinia pestis D182038] gi|270337308|gb|EFA48085.1| hydroxymethylbilane synthase [Yersinia pestis KIM D27] gi|294355971|gb|ADE66312.1| porphobilinogen deaminase [Yersinia pestis Z176003] gi|320013550|gb|ADV97121.1| hydroxymethylbilane synthase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 313 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 117/305 (38%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L Sbjct: 179 LENRIRYAMSAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G TL+ +V A DG R G +A +G + A + Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELADELLSRG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|74314316|ref|YP_312735.1| porphobilinogen deaminase [Shigella sonnei Ss046] gi|73857793|gb|AAZ90500.1| porphobilinogen deaminase [Shigella sonnei Ss046] Length = 320 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G +A +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAKQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|331649629|ref|ZP_08350711.1| hydroxymethylbilane synthase [Escherichia coli M605] gi|331041499|gb|EGI13647.1| hydroxymethylbilane synthase [Escherichia coli M605] Length = 320 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG + R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSLIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|271502386|ref|YP_003335412.1| porphobilinogen deaminase [Dickeya dadantii Ech586] gi|270345941|gb|ACZ78706.1| porphobilinogen deaminase [Dickeya dadantii Ech586] Length = 312 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H P + ++P+ T+GD + + L ++GG Sbjct: 1 MVDTILRIATRQSPLALWQAHFVQQRLEACH--PGLRVELVPMVTRGDVLLDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + R+D RD F+S+ +L D Sbjct: 59 KGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNNYATLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+ L R D+ V D RG + TRL+KL+N AI+LA AG+KRL Sbjct: 119 LPEGACVGTSSLRRQCQLRAHRPDLVVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L+ E P+ GQGA+ +E +++ + + L+ +NH+DT V ERA L Sbjct: 179 LENRIRTALSPEQSLPAVGQGAVGVECRLDDARTRALLAPLNHDDTATRVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + TLY +V A DG R G R DA +G A + Sbjct: 239 EGGCQVPIGSYAELQDDTLYLRALVGAPDGSRIIYAERRGPRQDAEALGIGLADELLERG 298 Query: 301 NKNVFN 306 +++ Sbjct: 299 ARDILQ 304 >gi|148204|gb|AAA67601.1| porphobilinogen deaminase [Escherichia coli str. K-12 substr. MG1655] Length = 320 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDXPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLGERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAGLPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGRPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|323161134|gb|EFZ47052.1| porphobilinogen deaminase [Escherichia coli E128010] Length = 313 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTHELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G +A +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|162139476|ref|YP_855002.2| porphobilinogen deaminase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 315 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 162/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +I TR SPLAL A + L ++ P + ++P+ST+GD+I + L ++GG Sbjct: 7 MAARTLKIATRKSPLALWQANFVKDRLEALY--PELQVELVPMSTQGDKILDTPLAKVGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ + + Sbjct: 65 KGLFVKELETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFGQIDE 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 125 LPQGAVVGTSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLE 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I + E P+ GQGA+ IE +++ + L+ + H +T V ERA L Sbjct: 185 MAHRITAFIEPEQSLPANGQGAVGIECRLDDHELHALLAPLEHPETRIRVLTERAMNRAL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ G+V + DG G D +G AQ + Sbjct: 245 QGGCQVPIGAYALVQGEEVWLRGLVGSPDGSRVIRDEIRGPLADGEALGHTLAQRLLADG 304 Query: 301 NKNVF 305 + Sbjct: 305 ADVIL 309 >gi|330908104|gb|EGH36623.1| porphobilinogen deaminase [Escherichia coli AA86] Length = 318 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG + R G DA +G A+ + Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSLIIRGERRGAPQDAEQMGISLAEELLNNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|331660148|ref|ZP_08361084.1| hydroxymethylbilane synthase [Escherichia coli TA206] gi|320185465|gb|EFW60234.1| Porphobilinogen deaminase [Shigella flexneri CDC 796-83] gi|331052716|gb|EGI24751.1| hydroxymethylbilane synthase [Escherichia coli TA206] gi|332084681|gb|EGI89869.1| porphobilinogen deaminase [Shigella boydii 5216-82] gi|332084931|gb|EGI90113.1| porphobilinogen deaminase [Shigella dysenteriae 155-74] Length = 313 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|167855158|ref|ZP_02477929.1| porphobilinogen deaminase [Haemophilus parasuis 29755] gi|167853703|gb|EDS24946.1| porphobilinogen deaminase [Haemophilus parasuis 29755] Length = 309 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 166/303 (54%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ RI TR SPLAL A + +L + P ++ ++ + TKGD I + L +IGGKG Sbjct: 2 KEILRIATRQSPLALWQANFVKDALEQ--RFPQLSVELVTMVTKGDIILDTPLAKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ +L+ L Sbjct: 60 LFVKELELALLKNRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNHYANLEALP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+ L+ + + RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 120 AGAVVGTSSLRRQCQLMAKYPHLQIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGLS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ + +E P+ GQGA+ IET +N+ + + +NH+ T V ERA + L G Sbjct: 180 ERIRTFIPVETSLPACGQGAVGIETRLNDERVLAYLAELNHQPTAYCVQAERAMNSRLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I GFA G + +V + DG S GN +A +G + A+ + Sbjct: 240 GCQVPIGGFATLTGDEIELNALVGSLDGSTIVRASAKGNIKEAEKLGVEVAEALLAKGAD 299 Query: 303 NVF 305 ++ Sbjct: 300 HIL 302 >gi|293407432|ref|ZP_06651352.1| porphobilinogen deaminase [Escherichia coli FVEC1412] gi|291425543|gb|EFE98581.1| porphobilinogen deaminase [Escherichia coli FVEC1412] Length = 313 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESHIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|194469126|ref|ZP_03075110.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205358767|ref|ZP_02658924.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194455490|gb|EDX44329.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205332052|gb|EDZ18816.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 313 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 160/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDV 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L Sbjct: 179 LESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG + R G+ A +G A+ + Sbjct: 239 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARAIL 303 >gi|126208484|ref|YP_001053709.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae L20] gi|126097276|gb|ABN74104.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 309 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 111/303 (36%), Positives = 163/303 (53%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR SPLAL A + L + P ++ ++ + TKGD I + L +IGGKG Sbjct: 2 KDTLRIATRQSPLALWQANFVKDELEK--RFPELSVELVTMVTKGDVILDTPLAKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L Sbjct: 60 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 120 AGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMP 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ +++E P+ GQGA+ IET VN+ + + +NH T V ERA L G Sbjct: 180 ERIRSFISVEQSLPAAGQGAVGIETRVNDERVLNYLATLNHNPTACCVIAERAMNTRLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I GFA G+ + +V A DG S +R +A +G A+ + Sbjct: 240 GCQVPIGGFATLNGNEITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQLLAQGAD 299 Query: 303 NVF 305 + Sbjct: 300 KIL 302 >gi|304398148|ref|ZP_07380023.1| porphobilinogen deaminase [Pantoea sp. aB] gi|304354434|gb|EFM18806.1| porphobilinogen deaminase [Pantoea sp. aB] Length = 317 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K FRI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG Sbjct: 5 MLDKIFRIATRQSPLALWQAHYVQQRLMSAH--PGLRVELVPMVTKGDIILDTPLAKVGG 62 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E + G D AVHS KD+P +GL + R+D RD F+SH S+ Sbjct: 63 KGLFVKELELAMQDGRADMAVHSMKDVPVSFPEGLGLVTICERDDPRDAFVSHHYDSIDA 122 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ + R D+ + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 123 LPQGAIVGTSSLRRQCQISARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 182 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ + E P+ GQGA+ IE +++ +L++ +NH+DT V ERA L Sbjct: 183 LEDRIRQAMPAEVSLPAVGQGAVGIECRLDDSVLIDLLRALNHDDTEVCVRAERAMNTRL 242 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA +G+ L+ G+V A DG++ R G R A +G A + Sbjct: 243 EGGCQVPIGSFAVLEGNDLWLRGMVGAPDGRVMVSGERRGPRAQAEQMGISLADELLNGG 302 Query: 301 NKNVF 305 + + Sbjct: 303 AREIL 307 >gi|309796256|ref|ZP_07690666.1| porphobilinogen deaminase [Escherichia coli MS 145-7] gi|308120138|gb|EFO57400.1| porphobilinogen deaminase [Escherichia coli MS 145-7] Length = 320 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHKTALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G +A +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|218560868|ref|YP_002393781.1| porphobilinogen deaminase [Escherichia coli S88] gi|218692081|ref|YP_002400293.1| porphobilinogen deaminase [Escherichia coli ED1a] gi|226740633|sp|B7MH66|HEM3_ECO45 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800250|sp|B7N295|HEM3_ECO81 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|218367637|emb|CAR05420.1| hydroxymethylbilane synthase [Escherichia coli S88] gi|218429645|emb|CAR10466.1| hydroxymethylbilane synthase [Escherichia coli ED1a] gi|323949314|gb|EGB45204.1| porphobilinogen deaminase [Escherichia coli H252] gi|323954009|gb|EGB49807.1| porphobilinogen deaminase [Escherichia coli H263] Length = 313 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICKREDPRDAFVSNTYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|209921277|ref|YP_002295361.1| porphobilinogen deaminase [Escherichia coli SE11] gi|218556364|ref|YP_002389278.1| porphobilinogen deaminase [Escherichia coli IAI1] gi|218697519|ref|YP_002405186.1| porphobilinogen deaminase [Escherichia coli 55989] gi|256021454|ref|ZP_05435319.1| porphobilinogen deaminase [Shigella sp. D9] gi|260846422|ref|YP_003224200.1| hydroxymethylbilane synthase HemC [Escherichia coli O103:H2 str. 12009] gi|260857792|ref|YP_003231683.1| hydroxymethylbilane synthase HemC [Escherichia coli O26:H11 str. 11368] gi|260870527|ref|YP_003236929.1| hydroxymethylbilane synthase HemC [Escherichia coli O111:H- str. 11128] gi|293417268|ref|ZP_06659893.1| porphobilinogen deaminase [Escherichia coli B185] gi|293468119|ref|ZP_06664531.1| porphobilinogen deaminase [Escherichia coli B088] gi|331670648|ref|ZP_08371485.1| hydroxymethylbilane synthase [Escherichia coli TA271] gi|226706285|sp|B6I4E0|HEM3_ECOSE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226740635|sp|B7M603|HEM3_ECO8A RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800249|sp|B7L959|HEM3_ECO55 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|209914536|dbj|BAG79610.1| porphobilinogen deaminase [Escherichia coli SE11] gi|218354251|emb|CAV00923.1| hydroxymethylbilane synthase [Escherichia coli 55989] gi|218363133|emb|CAR00774.1| hydroxymethylbilane synthase [Escherichia coli IAI1] gi|257756441|dbj|BAI27943.1| hydroxymethylbilane synthase HemC [Escherichia coli O26:H11 str. 11368] gi|257761569|dbj|BAI33066.1| hydroxymethylbilane synthase HemC [Escherichia coli O103:H2 str. 12009] gi|257766883|dbj|BAI38378.1| hydroxymethylbilane synthase HemC [Escherichia coli O111:H- str. 11128] gi|291321497|gb|EFE60935.1| porphobilinogen deaminase [Escherichia coli B088] gi|291431036|gb|EFF04031.1| porphobilinogen deaminase [Escherichia coli B185] gi|323155206|gb|EFZ41390.1| porphobilinogen deaminase [Escherichia coli EPECa14] gi|323182576|gb|EFZ67980.1| porphobilinogen deaminase [Escherichia coli 1357] gi|323380839|gb|ADX53107.1| porphobilinogen deaminase [Escherichia coli KO11] gi|323943796|gb|EGB39891.1| porphobilinogen deaminase [Escherichia coli H120] gi|324115735|gb|EGC09670.1| porphobilinogen deaminase [Escherichia coli E1167] gi|331062121|gb|EGI34043.1| hydroxymethylbilane synthase [Escherichia coli TA271] Length = 313 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G +A +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|283834568|ref|ZP_06354309.1| hydroxymethylbilane synthase [Citrobacter youngae ATCC 29220] gi|291069698|gb|EFE07807.1| hydroxymethylbilane synthase [Citrobacter youngae ATCC 29220] Length = 313 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDALMANH--PGLIVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + GL + RED RD F+S+ +L D Sbjct: 59 KGLFVKELEVALLEKRADIAVHSMKDVPVEFPDGLGLVTICEREDPRDAFVSNKYNTLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L + R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAKRRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E ++ L E P+ GQGA+ IE +++ + + L+ +NHE+T V ERA L Sbjct: 179 LESRVRTALPPEVSLPAVGQGAVGIECRLDDMRTRALLAPLNHEETALRVKAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELINGEIWLRALVGAPDGSQMVCGERRGAVQDAEQMGISLAEELLENG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARAIL 303 >gi|82779017|ref|YP_405366.1| porphobilinogen deaminase [Shigella dysenteriae Sd197] gi|81243165|gb|ABB63875.1| porphobilinogen deaminase [Shigella dysenteriae Sd197] Length = 320 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLVALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|331685522|ref|ZP_08386106.1| hydroxymethylbilane synthase [Escherichia coli H299] gi|331077223|gb|EGI48437.1| hydroxymethylbilane synthase [Escherichia coli H299] Length = 313 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG + R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSLIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|259906881|ref|YP_002647237.1| porphobilinogen deaminase [Erwinia pyrifoliae Ep1/96] gi|224962503|emb|CAX53958.1| Porphobilinogen deaminase [Erwinia pyrifoliae Ep1/96] gi|283476674|emb|CAY72503.1| hemC [Erwinia pyrifoliae DSM 12163] Length = 313 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 172/305 (56%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L+D H P + ++P+ T+GD I + L ++GG Sbjct: 1 MSDKILRIATRKSPLALWQAKYVQQRLIDCH--PGLRVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++SG D AVHS KD+P +GL + A R+D D F+S+ S+ Sbjct: 59 KGLFVKELEQAMLSGSADIAVHSMKDVPVAFPQGLGLVAICERDDPHDAFVSNRHASVDS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPQGAIVGTSSLRRQCQLSARRPDLVIHSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I++++ E+ P+ GQGA+ IE + + L+ +NH++T V+ ERA L Sbjct: 179 LSDRIRQVMPAEESLPAVGQGAVGIECRLEDMHTIGLLAALNHDETACRVSAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G L+ G+V + DG R G+R DA +G A+ + Sbjct: 239 EGGCQVPIGSYALLEGDQLWLRGLVGSPDGSQMVRGERRGSRADAEKMGISLAEELLDNG 298 Query: 301 NKNVF 305 +++ Sbjct: 299 ARDIL 303 >gi|300721444|ref|YP_003710719.1| hydroxymethylbilane synthase [Xenorhabdus nematophila ATCC 19061] gi|297627936|emb|CBJ88482.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Xenorhabdus nematophila ATCC 19061] Length = 313 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MTMKTIRIATRQSPLAMWQAHYVQKQLQHFH--PELKVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + GL + R+D RD F+S SL D Sbjct: 59 KGLFVKELELALLEKRADIAVHSMKDVPVEFPNGLGLVTICERDDPRDAFVSVKYASLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L + R D+ + D RG + TRL+KL+N AI+LA AG+KRL Sbjct: 119 LPTGSVVGTSSLRRQCQLRQLRPDLVIRDLRGNVGTRLSKLDNGDYDAIILATAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ L E P+ GQGA+ IE +++ + +EL+ +NH T V ERA L Sbjct: 179 LEERIRMPLAPELLLPAVGQGAVGIECRLDDQQTRELLAPLNHARTEICVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + ++ +V A DG + R + +A G A+ + Sbjct: 239 EGGCQVPIGSYAIWQEDKIWLRALVGAPDGTVSVRGERVVSPEEARQAGVALAEELLEKG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARQIL 303 >gi|301029020|ref|ZP_07192174.1| porphobilinogen deaminase [Escherichia coli MS 196-1] gi|299878014|gb|EFI86225.1| porphobilinogen deaminase [Escherichia coli MS 196-1] Length = 320 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSDNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|260914569|ref|ZP_05921037.1| hydroxymethylbilane synthase [Pasteurella dagmatis ATCC 43325] gi|260631360|gb|EEX49543.1| hydroxymethylbilane synthase [Pasteurella dagmatis ATCC 43325] Length = 311 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 172/305 (56%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +I TR SPLAL A + L + P N+V++P+ TKGD I + L +IGG Sbjct: 1 MTNNTLKIATRQSPLALWQANYVKQRLESFY--PDLNVVLVPMVTKGDVILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+SGE D AVHS KD+P + +GL +S PRED D +S+T ++L++ Sbjct: 59 KGLFVKELEIALLSGEADIAVHSMKDVPMQFPEGLGLSVICPREDPHDALVSNTYRTLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L + R D+ + RG + TRL+KL+ AI+LA AG+ RL Sbjct: 119 LPQGAIVGTSSLRRQCQLKQLRPDLKIESLRGNVGTRLSKLDCGDYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++I+D P+ GQGA+ IE N+ + Q+L+ + +T D V ERA L Sbjct: 179 LTERIASFIDIQDMLPAAGQGAVGIECRKNDSRVQQLLAPLADIETTDCVLAERAMNTHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + +Y G+V A DG +A N+G A+ + Sbjct: 239 QGGCQVPIAGYAIIENDQIYLRGLVGALDGSAILRAEAKSAVKNAENLGIQVAEMLLQQG 298 Query: 301 NKNVF 305 N+ Sbjct: 299 AGNIL 303 >gi|306815158|ref|ZP_07449311.1| porphobilinogen deaminase [Escherichia coli NC101] gi|34222567|sp|Q8FBP1|HEM3_ECOL6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|222035503|emb|CAP78248.1| Porphobilinogen deaminase [Escherichia coli LF82] gi|305851527|gb|EFM51981.1| porphobilinogen deaminase [Escherichia coli NC101] gi|312948358|gb|ADR29185.1| porphobilinogen deaminase [Escherichia coli O83:H1 str. NRG 857C] Length = 313 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|30064902|ref|NP_839073.1| porphobilinogen deaminase [Shigella flexneri 2a str. 2457T] gi|56480439|ref|NP_709607.2| porphobilinogen deaminase [Shigella flexneri 2a str. 301] gi|61213578|sp|Q83PH4|HEM3_SHIFL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|30043162|gb|AAP18884.1| porphobilinogen deaminase, hydroxymethylbilane synthase [Shigella flexneri 2a str. 2457T] gi|56383990|gb|AAN45314.2| porphobilinogen deaminase, hydroxymethylbilane synthase [Shigella flexneri 2a str. 301] gi|313647157|gb|EFS11612.1| porphobilinogen deaminase [Shigella flexneri 2a str. 2457T] gi|332751946|gb|EGJ82341.1| porphobilinogen deaminase [Shigella flexneri 2747-71] gi|332996995|gb|EGK16613.1| porphobilinogen deaminase [Shigella flexneri VA-6] gi|332997894|gb|EGK17501.1| porphobilinogen deaminase [Shigella flexneri K-218] gi|333019501|gb|EGK38782.1| porphobilinogen deaminase [Shigella flexneri K-304] Length = 313 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLCALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|2495175|sp|Q59684|HEM3_PROMI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|726359|gb|AAC44329.1| porphobilinogen deaminase [Proteus mirabilis] Length = 313 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 117/305 (38%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A + L H P + ++P+ TKGD I + L ++GG Sbjct: 1 MPKSTIRIATRQSPLAMWQALYVKEQLQIAH--PSLVVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+S D AVHS KD+P +GL + RED RD F+S+ SL+ Sbjct: 59 KGLFVKELELALLSSRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYDSLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL+KL+N AI+LA AG+KRLK Sbjct: 119 LPAGSVVGTSSLRRQCQLKALRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ E P+ GQGA+ IE +++ Q L+ +NH DT V ERA L Sbjct: 179 LTERIRSSLSAEQSLPAVGQGAVGIECRLDDHDTQALLAALNHADTATCVKAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + ++ +V A DGK R + DA G A+ + Sbjct: 239 EGGCQVPIGSYAIWQNDKIWLRALVGAPDGKTILRGERLVSPEDAEQAGISLAEELLDKG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|260596029|ref|YP_003208600.1| porphobilinogen deaminase [Cronobacter turicensis z3032] gi|260215206|emb|CBA27057.1| Porphobilinogen deaminase [Cronobacter turicensis z3032] Length = 313 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAQYVKQRLEACH--PGLTVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ +SL + Sbjct: 59 KGLFVKELELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNRYKSLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + S++GTSSLRR+ + R D+ + RG + TRL+KL+N AI+LA AG+KRL+ Sbjct: 119 MPAGSIVGTSSLRRQCQIAARRPDLIIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLQ 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I L E P+ GQGA+ IE +++ + +EL+ +NHE+T V ERA L Sbjct: 179 LDARITSPLAPEISLPAVGQGAVGIECRLDDTRTRELLAPLNHEETAVRVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A K L+ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELKDGELWLRALVGAPDGSRIVRGERRGAPQDASQLGVSLAEELLNHG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|292486675|ref|YP_003529545.1| Porphobilinogen deaminase [Erwinia amylovora CFBP1430] gi|292897912|ref|YP_003537281.1| porphobilinogen deaminase [Erwinia amylovora ATCC 49946] gi|291197760|emb|CBJ44855.1| porphobilinogen deaminase [Erwinia amylovora ATCC 49946] gi|291552092|emb|CBA19129.1| Porphobilinogen deaminase [Erwinia amylovora CFBP1430] gi|312170741|emb|CBX79003.1| Porphobilinogen deaminase [Erwinia amylovora ATCC BAA-2158] Length = 313 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 173/305 (56%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L+D H P + ++P+ T+GD I + L ++GG Sbjct: 1 MSDKILRIATRKSPLALWQAKYVQQRLIDCH--PRLRVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++SG D AVHS KD+P +GL + A R+D D F+S+ S+ Sbjct: 59 KGLFVKELENAMLSGHADIAVHSMKDVPVAFPQGLGLVAICERDDPHDAFVSNHYASVDS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPAGAIVGTSSLRRQCQLSARRPDLVIHSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I++++ E+ P+ GQGA+ IE +++ + L+ +NH+DT V+ ERA L Sbjct: 179 LSGRIRQVMPAEESLPAVGQGAVGIECRLDDMRTIGLLAALNHDDTACRVSAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G L+ G+V + DG R G+R DA +G A+ + Sbjct: 239 EGGCQVPIGSYALLEGDRLWLRGLVGSPDGSQMVRGERRGSRADAEKMGISLAEELLDNG 298 Query: 301 NKNVF 305 +++ Sbjct: 299 ARDIL 303 >gi|170026227|ref|YP_001722732.1| porphobilinogen deaminase [Yersinia pseudotuberculosis YPIII] gi|238059009|sp|B1JPE6|HEM3_YERPY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|169752761|gb|ACA70279.1| porphobilinogen deaminase [Yersinia pseudotuberculosis YPIII] Length = 313 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 117/305 (38%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYTHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L Sbjct: 179 LENRIRYAMSAEESLPAVGQGAVGIECRLDDGHTRQLLAPLNHRHTELRVCAERAMNIRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G TL+ +V A DG R G +A +G + A + Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELADELLSRG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|329297028|ref|ZP_08254364.1| porphobilinogen deaminase [Plautia stali symbiont] Length = 313 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K FRI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG Sbjct: 1 MLNKIFRIATRQSPLALWQAQYVQQRLMAAH--PGLQVELMPMVTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P GL + RED RD F+S+ S+ Sbjct: 59 KGLFVKELELAMLENRADMAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNHYSSIDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + RG + TRL+KL+ + AI+LA AG+KRL Sbjct: 119 LPQGAVVGTSSLRRQCQISARRPDLVIHSLRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L E P+ GQGA+ IE +++ L++ +NH DT V ERA L Sbjct: 179 LEDRIRQALPAEFSLPAVGQGAVGIECRLDDQPLITLLQALNHSDTAVCVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA + L+ G+V A DG R G R A +G A+ + Sbjct: 239 EGGCQVPIGSFAVLEDDQLWLRGLVGAPDGSQMVVGERRGPREQAEQMGISLAEELLDGG 298 Query: 301 NKNVF 305 +++ Sbjct: 299 ARDIL 303 >gi|323167552|gb|EFZ53258.1| porphobilinogen deaminase [Shigella sonnei 53G] Length = 313 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G +A +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAKQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|239995985|ref|ZP_04716509.1| porphobilinogen deaminase [Alteromonas macleodii ATCC 27126] Length = 312 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 109/304 (35%), Positives = 168/304 (55%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RI TR S LAL A ++ L++ + P + ++P+ST+GD+I + L +IGGK Sbjct: 6 TTRTVRIATRKSALALWQAEYVKAKLLEHY--PSMTVELVPMSTQGDKILDTPLAKIGGK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P + +G + A RE+ D F+S+ SL L Sbjct: 64 GLFIKELEIAMLEGRADIAVHSMKDVPVEFPEGFGLHAICERENPFDAFVSNNHDSLDAL 123 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSSLRR+ + ++R D+ + D RG + TRL KL+ + AI+LA AG+ RL+ Sbjct: 124 PQGAVVGTSSLRRQCQIRKYRPDLIIKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLEM 183 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I+ L + P+ GQGA+ IE ++ + +L++ +NH DT V ERA L+ Sbjct: 184 ESRIRMPLPADISLPAVGQGAVGIECRNDDEELIKLLQALNHTDTNTRVTAERAMNERLE 243 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I FA G L G+V DG S +R A +IG + A+ + Sbjct: 244 GGCQVPIGSFATLDGDVLTLTGMVGKPDGSELLFASATASREKAADIGVEVAESLLEQGA 303 Query: 302 KNVF 305 + Sbjct: 304 GEIL 307 >gi|281180853|dbj|BAI57183.1| porphobilinogen deaminase [Escherichia coli SE15] Length = 313 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG + R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSLIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|149908497|ref|ZP_01897159.1| porphobilinogen deaminase [Moritella sp. PE36] gi|149808331|gb|EDM68268.1| porphobilinogen deaminase [Moritella sp. PE36] Length = 312 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H+ + +IP+ TKGD I + L ++GG Sbjct: 1 MATETLRIATRKSPLAMWQAEYVKARLEAIHQ--NLTVELIPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P + +GL + RED RD F+S+T + +++ Sbjct: 59 KGLFVKELEVAILENRADIAVHSMKDVPVEFPEGLDLEVICEREDPRDAFVSNTYRQIEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ ++D RG + TRLNKL+N AI+LA AG+KRL Sbjct: 119 LPPGAIVGTCSLRRQCQLSEARPDLKIMDLRGNVNTRLNKLDNKDYDAIILAAAGLKRLD 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I + E P+ GQGA+ IE +++ + + L+ +NH T D V ERA L Sbjct: 179 MEYRIASYIEPEQSLPAVGQGAVGIECRIDDERVKALLAPLNHALTSDRVLAERAMNLAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G L+ G+V DG G+R +A +G + A + Sbjct: 239 EGGCQVPIGSYAIIDGDELWLRGLVGKPDGTEVIRAEIRGDRKNARQLGLELADKLLAQG 298 Query: 301 NKNVF 305 K + Sbjct: 299 AKEIL 303 >gi|191166073|ref|ZP_03027908.1| porphobilinogen deaminase [Escherichia coli B7A] gi|190903849|gb|EDV63563.1| porphobilinogen deaminase [Escherichia coli B7A] Length = 313 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHKTALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G +A +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|307250258|ref|ZP_07532212.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857699|gb|EFM89801.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 314 Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 109/303 (35%), Positives = 164/303 (54%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR SPLAL A + L + P ++ ++ + TKGD I + +L +IGGKG Sbjct: 7 KDTLRIATRQSPLALWQANFVKDELEK--RFPELSVELVTMVTKGDVILDTSLAKIGGKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L Sbjct: 65 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDELP 124 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 125 AGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMP 184 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ +++E P+ GQGA+ IET V++ + + +NH T V ERA L G Sbjct: 185 ERIRSFISVEQSLPAAGQGAVGIETRVDDERVLNYLATLNHNPTACCVIAERAMNTRLQG 244 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I GF+ G+ + +V A DG S +R +A +G A+ + Sbjct: 245 GCQVPIGGFSTLNGNEITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQLLAQGAD 304 Query: 303 NVF 305 + Sbjct: 305 KIL 307 >gi|238892405|ref|YP_002917139.1| porphobilinogen deaminase [Klebsiella pneumoniae NTUH-K2044] gi|329997497|ref|ZP_08302799.1| hydroxymethylbilane synthase [Klebsiella sp. MS 92-3] gi|238544721|dbj|BAH61072.1| porphobilinogen deaminase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328539065|gb|EGF65104.1| hydroxymethylbilane synthase [Klebsiella sp. MS 92-3] Length = 318 Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +I TR SPLAL A ++ L H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLKVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + R+D RD F+S+ S+ + Sbjct: 64 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNRYASIDE 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+++ RG + TRL+KL+N + AI+LA AG+KRL+ Sbjct: 124 LPAGSVVGTSSLRRQCQLAATRPDLAIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLQ 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L+ E P+ GQGA+ IE +++ + L+ +NH +T V ERA L Sbjct: 184 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTRGLLAPLNHTETAVRVRAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A K L+ +V A DG R G A +G A+ + Sbjct: 244 EGGCQVPIGSYAELKDGELWLRALVGAPDGSQLVRGERRGPAEQAEALGISLAEELLDNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|88861269|ref|ZP_01135901.1| porphobilinogen deaminase [Pseudoalteromonas tunicata D2] gi|88816750|gb|EAR26573.1| porphobilinogen deaminase [Pseudoalteromonas tunicata D2] Length = 312 Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 RI TR S LAL A ++ L H P + ++P+ST+GD+I + L +IGGK Sbjct: 4 SSPTLRIATRKSALALWQAEFVKAQLEIHH--PGIQVELVPMSTQGDKILDTPLAKIGGK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E+ ++ G D AVHS KD+P + +GL+++ RED RD F+S+ +++++L Sbjct: 62 GLFVKELEQAMLEGRADIAVHSMKDVPVEFPEGLELNTICEREDPRDAFVSNRFKTIEEL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSSLRR+ + R D+ + D RG + TRL KL+ + AI+LA AG+ RL+ Sbjct: 122 PQGAVVGTSSLRRQCQIRALRPDLEIRDLRGNVNTRLAKLDEGQYDAIILAAAGLIRLEM 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I + E P+ GQGA+ IE ++ ++L+ + H +T V ERA L+ Sbjct: 182 PQRIASFIEPEQSLPANGQGAVGIECRSDDITTKQLLAALEHTETRIRVLAERAMNRRLE 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I FA G + G+V A DG G DA +G + A + Sbjct: 242 GGCQVPIGAFAQVSGEHITIRGLVGAIDGSEILRDQVQGLCADAEQLGVELANKLLAQGA 301 Query: 302 KNVFN 306 + Sbjct: 302 DKILQ 306 >gi|157834325|pdb|1YPN|A Chain A, Reduced Form Hydroxymethylbilane Synthase (K59q Mutant) Crystal Structure After 2 Hours In A Flow Cell Determined By Time-Resolved Laue Diffraction Length = 313 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 +GLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 QGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|157144433|ref|YP_001451752.1| porphobilinogen deaminase [Citrobacter koseri ATCC BAA-895] gi|157081638|gb|ABV11316.1| hypothetical protein CKO_00147 [Citrobacter koseri ATCC BAA-895] Length = 318 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +L+ H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDALIAQH--PGLVVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L + Sbjct: 64 KGLFVKELEVALLEKRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNQYNNLDE 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ L E P+ GQGA+ IE +++ + Q L+ +NHE+T V ERA L Sbjct: 184 LTSRIRTALPPEISLPAVGQGAVGIECRLDDARTQALLAPLNHEETALRVKAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 EGGCQVPIGSYAEIIDGEVWLRALVGAPDGSQMIRGERRGLPQDAAQMGISLAEELLANG 303 Query: 301 NKNVF 305 + + Sbjct: 304 ARAIL 308 >gi|119947244|ref|YP_944924.1| porphobilinogen deaminase [Psychromonas ingrahamii 37] gi|166217780|sp|A1T0R0|HEM3_PSYIN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|119865848|gb|ABM05325.1| porphobilinogen deaminase [Psychromonas ingrahamii 37] Length = 310 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A +S L+ H P + ++P+ TKGD I + L ++GG Sbjct: 1 MTAQKIRIATRHSPLAMWQANFIKSELLKYH--PNLIVELLPMKTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL ++ RED D F+S+ + L + Sbjct: 59 KGLFVKELEVAILEGRADIAVHSIKDVPVDFPEGLGLTTICKREDPHDAFVSNHYKQLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ +L R DI + + RG + TRL KL+ + AI+LA AG+ RL+ Sbjct: 119 LPEGAIVGTCSLRRQCQILALRPDIIIKNLRGNVNTRLRKLDEGEYDAIILAAAGLMRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++ E P+ GQGA+ IE +++ + L+K + +T + ERA +L Sbjct: 179 MQHRITSLIAPEVSLPAVGQGAVGIECRLDDEQTITLLKPLEDPETRIRITAERAMNLKL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I FA + L+ G+V + DGK G++ DA +G A+ + Sbjct: 239 QGGCQVPIGSFAILENEQLFLRGLVGSVDGKQIIRKEITGHQNDAQQLGITLAEQLLACG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AEEIL 303 >gi|145300736|ref|YP_001143577.1| porphobilinogen deaminase [Aeromonas salmonicida subsp. salmonicida A449] gi|142853508|gb|ABO91829.1| porphobilinogen deaminase [Aeromonas salmonicida subsp. salmonicida A449] Length = 315 Score = 402 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 162/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +I TR SPLAL A + L ++ P + ++P+ST+GD+I + L ++GG Sbjct: 7 MAARTLKIATRKSPLALWQANFVKDRLEALY--PELQVELVPMSTQGDKILDTPLAKVGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ ++ Sbjct: 65 KGLFVKELETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFSQIEA 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 125 LPQGAVVGTSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLE 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I + E P+ GQGA+ IE +++ + L+ + H +T V ERA L Sbjct: 185 MAHRITAFIEPEQSLPANGQGAVGIECRLDDHELHTLLAPLEHAETRIRVLTERAMNRAL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ G+V + DG G D +G AQ + Sbjct: 245 QGGCQVPIGAYALVQGDEVWLRGLVGSPDGSQVIHDEIRGPLADGEALGHTLAQRLLAAG 304 Query: 301 NKNVF 305 + Sbjct: 305 ADVIL 309 >gi|156935870|ref|YP_001439786.1| porphobilinogen deaminase [Cronobacter sakazakii ATCC BAA-894] gi|166217766|sp|A7MQJ1|HEM3_ENTS8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|156534124|gb|ABU78950.1| hypothetical protein ESA_03753 [Cronobacter sakazakii ATCC BAA-894] Length = 313 Score = 402 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAQYVKQRLEACH--PGLTVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ +SL + Sbjct: 59 KGLFVKELELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQYKSLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + S++GTSSLRR+ + R D+ + RG + TRL+KL+N AI+LA AG+KRL+ Sbjct: 119 MPAGSIVGTSSLRRQCQIAARRPDLIIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLQ 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I L E P+ GQGA+ IE +++ + +EL+ +NHE+T V ERA L Sbjct: 179 LDARITSPLAPEISLPAVGQGAVGIECRLDDTRTRELLAPLNHEETAVRVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + L+ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELRDGELWLRALVGAPDGSRIVRGERRGAPEDARQLGISLAEELLNHG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|290477117|ref|YP_003470030.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Xenorhabdus bovienii SS-2004] gi|289176463|emb|CBJ83272.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Xenorhabdus bovienii SS-2004] Length = 311 Score = 402 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 112/302 (37%), Positives = 165/302 (54%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RI TR SPLA+ A + L H P + +IP+ T+GD I + L ++GGKGL Sbjct: 2 KIIRIATRQSPLAMWQAQYVQKQLEQFH--PELKVELIPMVTRGDVILDTPLAKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ D AVHS KD+P + GL + R D RD F+S SL +L + Sbjct: 60 FVKELELALLENRADIAVHSMKDVPVEFPDGLGLVTICERGDPRDAFVSVKYTSLDELPI 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S++GTSSLRR+ L + R D+ V D RG + TRL KL+N AI+LA AG+KRL E Sbjct: 120 GSIVGTSSLRRQCQLRQLRPDLVVRDLRGNVGTRLGKLDNGDYDAIILAAAGLKRLGLED 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L E P+ GQGA+ IE +++ + +EL+ +NH T V ERA L+G Sbjct: 180 RIRMPLEPELLLPAVGQGAVGIECRLDDKQTRELLAPLNHTGTEICVLAERAMNTHLEGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I +A +G+ ++ +V A DG I + + +A G + A+ + + Sbjct: 240 CQVPIGSYAIWQGNNIWLRALVGAPDGSITVRGEKTVSPEEARRAGVELAEELLEKGARQ 299 Query: 304 VF 305 + Sbjct: 300 IL 301 >gi|24375795|ref|NP_719838.1| porphobilinogen deaminase [Shewanella oneidensis MR-1] gi|39931562|sp|Q8E9H0|HEM3_SHEON RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|24350743|gb|AAN57282.1|AE015863_11 porphobilinogen deaminase [Shewanella oneidensis MR-1] Length = 310 Score = 402 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 170/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ + D AVHS KD+P +GL + RED RD F+S+ +S+ + Sbjct: 59 KGLFVKELEVAMLEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNIYKSISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+ RLK Sbjct: 119 LPLGATVGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++ E+ P+ GQGA+ IE N+ + + L+ + H +T V ERA L Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA G + G+V DG E G + +A +G A+ + Sbjct: 239 EGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTEATQLGVALAEELLSKG 298 Query: 301 NKNVFN 306 K++ + Sbjct: 299 AKSILD 304 >gi|157833452|pdb|1PDA|A Chain A, Structure Of Porphobilinogen Deaminase Reveals A Flexible Multidomain Polymerase With A Single Catalytic Site gi|41664|emb|CAA27813.1| unnamed protein product [Escherichia coli] Length = 313 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G+C+ I +A ++ G+V A DG R G DA +G A+ + Sbjct: 239 EGACQVPIGSYAELIDGEIWLRGLVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|331005642|ref|ZP_08329011.1| Porphobilinogen deaminase [gamma proteobacterium IMCC1989] gi|330420567|gb|EGG94864.1| Porphobilinogen deaminase [gamma proteobacterium IMCC1989] Length = 324 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 167/305 (54%), Gaps = 4/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR SPLAL A ++ L +H P + ++P++++GD I + L ++GGKG Sbjct: 13 KNTITIATRKSPLALWQAEYVKARLEALH--PEVTVELLPMTSRGDHILDVPLAKVGGKG 70 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L++GE D AVHS KD+P + +GL +S RED RD F+S S DL Sbjct: 71 LFVKELEHALLNGEADIAVHSMKDVPMEFPEGLGLSVICEREDPRDAFVSEKYASFADLP 130 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+ LL R D+ + RG + TRL KL+ + AI+LA AG+ RLK Sbjct: 131 QGAVVGTSSLRRQCQLLEQRPDLQITFLRGNVNTRLRKLDEGEYDAIILAAAGLMRLKMA 190 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E L E P+ GQGA+ IE ++ + + + +N T + V ERA L+G Sbjct: 191 DRITEYLTPELCLPAGGQGAVGIECRDDDEQVKTWLAPLNDPITHECVAAERAMNRRLEG 250 Query: 243 SCKSAIAGFAY--CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C+ IA +A G L+ G+V + DGKI E G A ++G A+ + Sbjct: 251 GCQVPIASYAIHSADGKQLWLRGLVGSPDGKIMLEDEVTGAPDQADDLGVKLAERLLDKG 310 Query: 301 NKNVF 305 + + Sbjct: 311 AETIL 315 >gi|152972793|ref|YP_001337939.1| porphobilinogen deaminase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|166217775|sp|A6TGI8|HEM3_KLEP7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|150957642|gb|ABR79672.1| porphobilinogen deaminase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 313 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +I TR SPLAL A ++ L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLKVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + R+D RD F+S+ S+ + Sbjct: 59 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNRYASIDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+++ RG + TRL+KL+N + AI+LA AG+KRL+ Sbjct: 119 LPAGSVVGTSSLRRQCQLAATRPDLAIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLQ 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L+ E P+ GQGA+ IE +++ + L+ +NH +T V ERA L Sbjct: 179 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTRGLLAPLNHTETAVRVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A K L+ +V A DG R G A +G A+ + Sbjct: 239 EGGCQVPIGSYAELKDGELWLRALVGAPDGSQLVRGERRGPAEQAEALGISLAEELLDNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|268592915|ref|ZP_06127136.1| hydroxymethylbilane synthase [Providencia rettgeri DSM 1131] gi|291311707|gb|EFE52160.1| hydroxymethylbilane synthase [Providencia rettgeri DSM 1131] Length = 314 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 113/304 (37%), Positives = 167/304 (54%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 RI TR SPLAL A + L +H P + ++P+ TKGD I + L ++GGK Sbjct: 3 STNIVRIATRKSPLALWQAHFVKDKLEQLH--PGLLVELVPMVTKGDIILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L+ G D AVHS KD+P + +GL + RED RD F+S+ +L+ L Sbjct: 61 GLFVKELELALLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYDNLEAL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 S++GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 121 PEGSIVGTSSLRRQCQLRELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E IK L E P+ GQGA+ IE +N+ K +EL+ +N++ T V ERA L+ Sbjct: 181 ETRIKTALAPEQCLPAVGQGAVGIECRLNDSKTRELLAKLNNDATSTCVLAERAMNMRLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I +A + ++ +V A DG + R + +A G A+ + Sbjct: 241 GGCQVPIGSYAIWQDDKIWLRALVGAPDGSVIIRGERRVSPSEANQAGVSLAEELLERGA 300 Query: 302 KNVF 305 + + Sbjct: 301 REIL 304 >gi|113968732|ref|YP_732525.1| porphobilinogen deaminase [Shewanella sp. MR-4] gi|114049125|ref|YP_739675.1| porphobilinogen deaminase [Shewanella sp. MR-7] gi|117918843|ref|YP_868035.1| porphobilinogen deaminase [Shewanella sp. ANA-3] gi|123131000|sp|Q0HQI7|HEM3_SHESR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123325438|sp|Q0HN99|HEM3_SHESM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|158512312|sp|A0KS60|HEM3_SHESA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|113883416|gb|ABI37468.1| porphobilinogen deaminase [Shewanella sp. MR-4] gi|113890567|gb|ABI44618.1| porphobilinogen deaminase [Shewanella sp. MR-7] gi|117611175|gb|ABK46629.1| porphobilinogen deaminase [Shewanella sp. ANA-3] Length = 310 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 170/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L VH P + ++P+STKGD I + L ++GG Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERVH--PGIVVELLPMSTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ + D AVHS KD+P +GL + RED RD F+S+ +S+ + Sbjct: 59 KGLFVKELEVAMLEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+ RLK Sbjct: 119 LPLGATVGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++ E+ P+ GQGA+ IE N+ + + L+ + H +T V ERA L Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA G + G+V DG E G + +A +G A+ + Sbjct: 239 EGGCQVPIGAFAEIHGDEMTLRGLVGNPDGSEIIEGVITGPKTEATKLGVALAEELLSKG 298 Query: 301 NKNVFN 306 K++ + Sbjct: 299 AKSILD 304 >gi|312963804|ref|ZP_07778275.1| Porphobilinogen deaminase [Pseudomonas fluorescens WH6] gi|311281839|gb|EFQ60449.1| Porphobilinogen deaminase [Pseudomonas fluorescens WH6] Length = 313 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLELAH--PGLKVSLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL + Sbjct: 59 KGLFVKELETALLENEADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTYTSLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPPGSIVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I +++ED P+ GQGA+ IE + + L+K ++H DT V ERA L Sbjct: 179 FEDRITSAISVEDSLPAGGQGAVGIECRTADSEIHALLKPLDHHDTEVRVTAERALNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V DG G + DA +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDNIWLRGLVGDPDGGTLLTAQARGPQADATALGIQVAEELLEKG 298 Query: 301 NKNVFN 306 + Sbjct: 299 AGAILQ 304 >gi|71278494|ref|YP_266842.1| porphobilinogen deaminase [Colwellia psychrerythraea 34H] gi|123733846|sp|Q48AW8|HEM3_COLP3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|71144234|gb|AAZ24707.1| porphobilinogen deaminase [Colwellia psychrerythraea 34H] Length = 317 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 107/308 (34%), Positives = 159/308 (51%), Gaps = 4/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR S LAL A ++ L H N+ ++P++TKGD I + L ++GG Sbjct: 1 MNNTTVRIATRKSALALWQAEYVKAQLEHFHD--GINVELVPMTTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + PRED RD F+S+T +SL D Sbjct: 59 KGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEVICPREDPRDAFVSNTIKSLSD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+ RL+ Sbjct: 119 LPQGSIVGTSSLRRQCQLKASRPDLDIRDLRGNVNTRLRKLDEGQYDAIILAAAGLIRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I + + E+ P+ GQGA+ IE ++ + L+ + T V ERA L Sbjct: 179 MSERIAQFIEPEEMLPANGQGAVGIECRNDDATIKALLAPLECATTRIRVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 G C+ I + G ++ G+V + DG E G + +G AQ + Sbjct: 239 QGGCQVPIGSYGVISADGKNIHLRGLVGSVDGSEMIESEITGPVEEGEALGNKLAQELLS 298 Query: 299 ISNKNVFN 306 + Sbjct: 299 RGADKILQ 306 >gi|59727198|gb|AAW92125.1| hydroxymethylbilane synthase [Enterobacter asburiae] Length = 313 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 161/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKQRLEACHS--GLRVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPKGSVVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH++T V ERA L Sbjct: 179 LESRIRVALPPELSLPAVGQGAVGIECRLDDARTRELLAPLNHDETAIRVKAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A L+ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELTEGELWLRALVGAPDGSQMVRGERRGKAQDAEQLGVSLAEELLDNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|261345249|ref|ZP_05972893.1| hydroxymethylbilane synthase [Providencia rustigianii DSM 4541] gi|282566947|gb|EFB72482.1| hydroxymethylbilane synthase [Providencia rustigianii DSM 4541] Length = 314 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 109/304 (35%), Positives = 170/304 (55%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 RI TR SPLAL A+ ++ L +H P + ++P+ TKGD I + L ++GGK Sbjct: 3 STNIVRIATRKSPLALWQAYFVKAKLEQLH--PNLQVELVPMVTKGDIILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L+ G D AVHS KD+P + +GL + RED RD F+S+ ++ +L Sbjct: 61 GLFVKELELALLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYANIDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 S++GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL+ Sbjct: 121 PAGSIVGTSSLRRQCQLKELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLEL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 ++ IK L E P+ GQGA+ IE +++ + ++L+ +NH++T V ERA L+ Sbjct: 181 DERIKTALEPELSLPAVGQGAVGIECRLDDQRTRDLLAKLNHDETSICVLAERAMNMRLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I +A + + ++ +V A DG R A G A+ + Sbjct: 241 GGCQVPIGSYAIWQDNKIWLRALVGAPDGSTVIRGERLVEPEHATQAGIALAEELLDKGA 300 Query: 302 KNVF 305 + + Sbjct: 301 REIL 304 >gi|160877198|ref|YP_001556514.1| porphobilinogen deaminase [Shewanella baltica OS195] gi|189028155|sp|A9L5G0|HEM3_SHEB9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|160862720|gb|ABX51254.1| porphobilinogen deaminase [Shewanella baltica OS195] gi|315269402|gb|ADT96255.1| porphobilinogen deaminase [Shewanella baltica OS678] Length = 310 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 170/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +S+ + Sbjct: 59 KGLFVKELEVAMLDDLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+ + R D+ + D RG + TRL KL+N + AI+LA AG+ RLK Sbjct: 119 LPLGATVGTSSLRRQCQIRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++ E+ P+ GQGA+ IE +N+ + + L+ + H +T V ERA L Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRINDERVKALLAPLEHLETRYRVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA G + G+V DG E G + DA +G A+ + Sbjct: 239 EGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTDATQLGVALAEELLSKG 298 Query: 301 NKNVFN 306 K++ + Sbjct: 299 AKSILD 304 >gi|293390862|ref|ZP_06635196.1| porphobilinogen deaminase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951396|gb|EFE01515.1| porphobilinogen deaminase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 308 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 109/306 (35%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K +I TR SPLAL A + L ++ P N+ ++P+ TKGD I + L +IGG Sbjct: 1 MTQKSLKIATRQSPLALWQANYVKDRLQQLY--PDLNVELVPMVTKGDVILDSPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L++ E D AVHS KD+P + +GL ++ RED RD F+S++ ++L + Sbjct: 59 KGLFVKELENALLNKEADIAVHSMKDVPMQFPEGLGLAVICKREDPRDAFVSNSYRTLAE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L + R D+ + RG + TRL+KL+N AI+LA AG+ RL Sbjct: 119 LPQGAVVGTSSLRRQCQLKKLRPDLEIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I +++E P+ GQGA+ IE ++ Q+L+ + +T V ERA L Sbjct: 179 LAERIASFIDVEQSLPAAGQGAVGIECRTDDVAVQQLLAPLADAETTSCVLAERAMNHHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I G+A + S LY +V + DG +A +G A + Sbjct: 239 QGGCQVPIGGYAVLRDSELYLRALVGSVDGSTIIRAEGKSAVENADVLGVQIADQLLAQG 298 Query: 301 NKNVFN 306 + Sbjct: 299 ADKILQ 304 >gi|91791755|ref|YP_561406.1| porphobilinogen deaminase [Shewanella denitrificans OS217] gi|91713757|gb|ABE53683.1| porphobilinogen deaminase [Shewanella denitrificans OS217] Length = 315 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 106/306 (34%), Positives = 166/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLAL A ++ L +H P ++ ++P++TKGD + + L ++GG Sbjct: 6 MSQHLIRIATRKSPLALWQAEFVKAELERIH--PGLSVELVPMTTKGDVLLDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +L + Sbjct: 64 KGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEIICEREDPRDAFVSNNFANLAE 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + D RG + TRL KL++ AI+LA AG+ RLK Sbjct: 124 LPKGAVVGTSSLRRQCQIRAMRPDLIIKDLRGNVGTRLAKLDSGDYDAIILAAAGLIRLK 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I ++ E+ P+ GQGA+ IE ++ + + L+ + H +T V ERA L Sbjct: 184 LISRIASYISPEESLPANGQGAVGIECRTDDARVKALLAPLEHLETRYRVIAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G L G+V DG G + +A +G A+ + Sbjct: 244 EGGCQVPIGAYAEIEGDELTLRGLVGNPDGSQIITGQVKGLKSEASQLGEQLAEILLAQG 303 Query: 301 NKNVFN 306 K + + Sbjct: 304 AKTILD 309 >gi|183600277|ref|ZP_02961770.1| hypothetical protein PROSTU_03837 [Providencia stuartii ATCC 25827] gi|188020068|gb|EDU58108.1| hypothetical protein PROSTU_03837 [Providencia stuartii ATCC 25827] Length = 314 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 110/304 (36%), Positives = 163/304 (53%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 RI TR SPLAL A+ + L H P + ++P+ TKGD I + L ++GGK Sbjct: 3 STNIVRIATRKSPLALWQAYFVKEKLEQFH--PGLQVELVPMVTKGDIILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L Sbjct: 61 GLFVKELELALLEKRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQYDSLDAL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SV+GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 121 PAGSVVGTSSLRRQCQLRELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I+ L E P+ GQGA+ IE +++ + ++L++ +N ++T V ERA L+ Sbjct: 181 EARIRTALAPEQSLPAVGQGAVGIECRLDDERTRQLLEKLNDDNTSVCVLAERAMNMRLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I +A + ++ +V A DG R A G A+ + Sbjct: 241 GGCQVPIGSYAIWQDGQIWLRALVGAPDGSQVIRGERLTTPEQATQAGISLAEELLDKGA 300 Query: 302 KNVF 305 + + Sbjct: 301 REIL 304 >gi|296046581|gb|ADG86432.1| hydroxymethylbilane synthase [Francisella novicida] Length = 317 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 107/308 (34%), Positives = 161/308 (52%), Gaps = 4/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M++ RI TR S LAL A ++ L H N+ ++P++TKGD I + L ++GG Sbjct: 1 MKQTTVRIATRKSALALWQAEYVKAQLEHFHD--GINVELVPMTTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + PRED RD F+S+T +SL D Sbjct: 59 KGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEVICPREDPRDAFVSNTIKSLSD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+ RL+ Sbjct: 119 LPQGSIVGTSSLRRQCQLKASRPDLDIRDLRGNVNTRLRKLDEGQYDAIILAAAGLIRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I + + E+ P+ GQGA+ IE ++ + L+ + T V ERA L Sbjct: 179 MSERIAQFIEPEEMLPANGQGAVGIECRNDDATIKALLAPLECATTRIRVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 G C+ I + G ++ G+V + DG E G + +G AQ + Sbjct: 239 QGGCQVPIGSYGVISADGKNIHLRGLVGSVDGSEMIESEITGPVEEGEALGNKLAQELLS 298 Query: 299 ISNKNVFN 306 + Sbjct: 299 RGADKILQ 306 >gi|261867394|ref|YP_003255316.1| porphobilinogen deaminase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412726|gb|ACX82097.1| porphobilinogen deaminase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 308 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 109/306 (35%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K +I TR SPLAL A + L ++ P N+ ++P+ TKGD I + L +IGG Sbjct: 1 MTQKSLKIATRQSPLALWQANYVKDLLQQLY--PDLNVELVPMVTKGDVILDSPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L++ E D AVHS KD+P + +GL ++ RED RD F+S++ ++L + Sbjct: 59 KGLFVKELENALLNKEADIAVHSMKDVPMQFPEGLGLAVICKREDPRDAFVSNSYRTLAE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+ RL Sbjct: 119 LPQGAVVGTSSLRRQCQLKTLRPDLEIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I +++E P+ GQGA+ IE ++ Q+L+ + +T V ERA L Sbjct: 179 LAERIASFIDVEQSLPAAGQGAVGIECRTDDVAVQQLLAPLADAETTSCVLAERAMNHHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I G+A + S LY +V + DG +A +G A+ + Sbjct: 239 QGGCQVPIGGYAVLRDSELYLRALVGSVDGSTIIRAEGKSAVENADVLGVQIAEQLLAQG 298 Query: 301 NKNVFN 306 + Sbjct: 299 ADKILQ 304 >gi|332534414|ref|ZP_08410254.1| porphobilinogen deaminase [Pseudoalteromonas haloplanktis ANT/505] gi|332036148|gb|EGI72623.1| porphobilinogen deaminase [Pseudoalteromonas haloplanktis ANT/505] Length = 312 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 108/307 (35%), Positives = 166/307 (54%), Gaps = 4/307 (1%) Query: 1 MEKKP--FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M +K RI TR S LAL A ++ L H + ++P+ST+GD I + L +I Sbjct: 1 MTEKTKLVRIATRKSALALWQAEFVKAELERFHA--DVRVELVPMSTQGDIILDTPLAKI 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLF +E+E+ ++ G D AVHS KD+P + +GL + RED RD F+S+ +L Sbjct: 59 GGKGLFVKELEQAMLDGRADIAVHSMKDVPVEFPQGLALHTICEREDPRDAFVSNNFANL 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L +++GTSSLRR+ + R D+ + D RG + TRL KL++ + AI+LA AG+ R Sbjct: 119 SALPQGAIVGTSSLRRQCQIKALRPDLDIRDLRGNVNTRLGKLDDGQYDAIILAAAGLIR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L+ E I + + E P+ GQGA+ IE +++ + L+ + H T VN ER+ Sbjct: 179 LEMESRIADYIEPEVSLPANGQGAVGIECRIDDEVTKALLAPLEHTQTRIRVNAERSMNR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+G C+ I +A G ++ G+V A DG G+ DA IG + A+ + Sbjct: 239 YLEGGCQVPIGAYALVDGEQVHLRGLVGAVDGSEILRDEVTGHVNDAEKIGIELAKKLLA 298 Query: 299 ISNKNVF 305 + Sbjct: 299 QGADKIL 305 >gi|332139557|ref|YP_004425295.1| porphobilinogen deaminase [Alteromonas macleodii str. 'Deep ecotype'] gi|327549579|gb|AEA96297.1| porphobilinogen deaminase [Alteromonas macleodii str. 'Deep ecotype'] Length = 312 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 106/304 (34%), Positives = 166/304 (54%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RI TR S LAL A ++ L++ + P + ++P+ST+GD+I + L +IGGK Sbjct: 6 TTRTVRIATRKSALALWQAEYVKAKLLEHY--PSMTVELVPMSTQGDKILDTPLAKIGGK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P + +G + A RE+ D F+S+ SL L Sbjct: 64 GLFIKELEIAMLEGRADIAVHSMKDVPVEFPEGFGLHAICERENPFDAFVSNNHDSLDAL 123 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +++GTSSLRR+ + ++R D+ + D RG + TRL KL+ + AI+LA AG+ RLK Sbjct: 124 PEGAIVGTSSLRRQCQIRKYRPDLIIKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLKM 183 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I+ L + P+ GQGA+ IE ++ + L++ +NH DT V ERA L+ Sbjct: 184 QSRIRMALPADISLPAVGQGAVGIECRNDDEELIALLQALNHADTHTRVTAERAMNERLE 243 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I FA L G+V DG S +R A ++G + A+ + Sbjct: 244 GGCQVPIGSFATLDNDVLTLTGMVGKPDGSELLFASATASREKAKDMGIEVAEALLEQGA 303 Query: 302 KNVF 305 + Sbjct: 304 GEIL 307 >gi|315125211|ref|YP_004067214.1| porphobilinogen deaminase [Pseudoalteromonas sp. SM9913] gi|315013724|gb|ADT67062.1| porphobilinogen deaminase [Pseudoalteromonas sp. SM9913] Length = 312 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 106/307 (34%), Positives = 168/307 (54%), Gaps = 4/307 (1%) Query: 1 MEKKP--FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M +K RI TR S LAL A ++ L H + ++P+ST+GD I + L +I Sbjct: 1 MTEKTKLVRIATRKSALALWQAEFVKAQLEHFHD--DVRVELVPMSTQGDIILDTPLAKI 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLF +E+E+ ++ G D AVHS KD+P + L++ RED RD F+S+ ++ Sbjct: 59 GGKGLFVKELEQAMLDGRADIAVHSMKDVPVEFPDDLELHVICEREDPRDAFVSNNFANI 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L +++GTSSLRR+ + R D+ + D RG + TRL KL++ + AI+LA AG+ R Sbjct: 119 DALPQGAIVGTSSLRRQCQIRALRPDLEIRDLRGNVNTRLAKLDSGQYDAIILAAAGLIR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L+ + I++ + E P+ GQGA+ IE +N+ + L+ + H +T VN ERA Sbjct: 179 LEMGERIRDFIEPEVSLPANGQGAVGIECRINDEVTKALLAPLEHSETRIRVNAERAMNR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+G C+ I +A G ++ G+V A DG +G+ DA +G + A+ + Sbjct: 239 HLEGGCQVPIGAYALVDGEQVHLRGLVGAIDGSEILRDEISGHVDDAEKLGVELAKKLLA 298 Query: 299 ISNKNVF 305 + Sbjct: 299 QGADKIL 305 >gi|90406695|ref|ZP_01214888.1| porphobilinogen deaminase [Psychromonas sp. CNPT3] gi|90312148|gb|EAS40240.1| porphobilinogen deaminase [Psychromonas sp. CNPT3] Length = 311 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A +S L+ H P + ++ + TKGD+I + L ++GG Sbjct: 1 MSNKIIRIATRHSPLAMWQANFVKSELLKWH--PELQVELLAMKTKGDKILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL ++ RED RD F+S+ ++ Sbjct: 59 KGLFVKELEVAILEGRADIAVHSMKDVPVDFPEGLGLAVICEREDPRDAFVSNHFANIAA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R DI V D RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPQGSVVGTSSLRRQCQLRAQRPDIKVKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLD 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++E+ P+ GQGA+ IE +++ + L+K + H T V ERA L Sbjct: 179 MHDRIASYMSVEESLPAVGQGAVGIECRLDDMQTLALLKPLEHRITRLRVTAERAMNLAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I + K TL+ G+V + DG G DA +G + AQ + Sbjct: 239 QGGCQVPIGSYCILKEDTLWLRGLVGSVDGTHIIRKEIRGKVADAEQMGLNLAQQLLESG 298 Query: 301 NKNVF 305 + Sbjct: 299 ADKIL 303 >gi|307132975|ref|YP_003884991.1| hydroxymethylbilane synthase [Dickeya dadantii 3937] gi|306530504|gb|ADN00435.1| hydroxymethylbilane synthase [Dickeya dadantii 3937] Length = 313 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 115/307 (37%), Positives = 169/307 (55%), Gaps = 3/307 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H P + ++P+ T+GD + + L ++GG Sbjct: 1 MVDTILRIATRQSPLALWQAHFVQQRLKACH--PGLRVELVPMVTRGDVLLDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + R+D RD F+S+ SL D Sbjct: 59 KGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYDSLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + + +GTSSLRR+ L R D++V D RG + TRL+KL+N AI+LA AG+KRL Sbjct: 119 LPVGACVGTSSLRRQCQLRAHRPDLTVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L+ E P+ GQGA+ +E +++ + + L+ +NH+DT V ERA L Sbjct: 179 LEDRIRTALSPEQSLPAVGQGAVGVECRLDDARTRALLAPLNHDDTATRVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ I +A G TL+ +V A DG R G R DA +G A + Sbjct: 239 EGGCQVPIGSYAELQDGDTLWLRALVGAPDGSRIIYAERRGLRQDAEQLGIALADELLER 298 Query: 300 SNKNVFN 306 +++ Sbjct: 299 GARDILQ 305 >gi|217975048|ref|YP_002359799.1| porphobilinogen deaminase [Shewanella baltica OS223] gi|304412540|ref|ZP_07394146.1| porphobilinogen deaminase [Shewanella baltica OS183] gi|307307199|ref|ZP_07586937.1| porphobilinogen deaminase [Shewanella baltica BA175] gi|254800258|sp|B8E879|HEM3_SHEB2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|217500183|gb|ACK48376.1| porphobilinogen deaminase [Shewanella baltica OS223] gi|304349182|gb|EFM13594.1| porphobilinogen deaminase [Shewanella baltica OS183] gi|306910438|gb|EFN40869.1| porphobilinogen deaminase [Shewanella baltica BA175] Length = 310 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 170/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +S+ + Sbjct: 59 KGLFVKELEVAMLDDLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+ + R D+ + D RG + TRL KL+N + AI+LA AG+ RLK Sbjct: 119 LPLGATVGTSSLRRQCQIRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++ E+ P+ GQGA+ IE +N+ + + L+ + H +T V ERA L Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRINDERVKALLAPLEHLETRYRVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA G + G+V DG E G + +A +G A+ + Sbjct: 239 EGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTEATQLGVALAEELLSKG 298 Query: 301 NKNVFN 306 K++ + Sbjct: 299 AKSILD 304 >gi|240949414|ref|ZP_04753755.1| porphobilinogen deaminase [Actinobacillus minor NM305] gi|240296163|gb|EER46819.1| porphobilinogen deaminase [Actinobacillus minor NM305] Length = 308 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 160/303 (52%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR SPLAL A ++ L P I ++ + TKGD I + L +IGGKG Sbjct: 2 KDTLRIATRQSPLALWQANFVKAELEK--HFPELQIELVTMVTKGDIILDTPLAKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L Sbjct: 60 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNQYQNLDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+ L+ + + RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 120 KGAVVGTSSLRRQCQLMAAYPHLEIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMP 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ +++E P+ GQGA+ IET +++ + + +NH+ T V ERA A L G Sbjct: 180 ERIRSFISVEQSLPAAGQGAVGIETRLDDQRVLSYLAKLNHQPTAYRVIAERAMNAHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I GFA + L +V + DG S A +G + A + Sbjct: 240 GCQVPIGGFATLENDELTLNALVGSLDGSTIIRASGVAPVDKAEQLGIEVATKLLAQGAD 299 Query: 303 NVF 305 + Sbjct: 300 KIL 302 >gi|322514003|ref|ZP_08067077.1| hydroxymethylbilane synthase [Actinobacillus ureae ATCC 25976] gi|322120153|gb|EFX92114.1| hydroxymethylbilane synthase [Actinobacillus ureae ATCC 25976] Length = 309 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 111/303 (36%), Positives = 160/303 (52%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR SPLAL A + L + P + ++ + TKGD I + L +IGGKG Sbjct: 2 KDILRIATRQSPLALWQANFVKKELEK--RFPELQVELVTMVTKGDIILDTPLAKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L Sbjct: 60 LFVKELELALLEKRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 120 AGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYEAIILASAGLIRLGMP 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ + +E P+ GQGA+ IET VN+ + + +NH T V ERA L G Sbjct: 180 ERIRSFIAVEQSLPAAGQGAVGIETRVNDERVLNYLASLNHNPTACCVMAERAMNTRLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I GFA G+ + +V A DG S + DA +G A+ + Sbjct: 240 GCQVPIGGFATLNGNEITLNALVGALDGSTIIRASGVADIEDAEQLGISVAEQLLAQGAD 299 Query: 303 NVF 305 + Sbjct: 300 KIL 302 >gi|251793296|ref|YP_003008024.1| porphobilinogen deaminase [Aggregatibacter aphrophilus NJ8700] gi|247534691|gb|ACS97937.1| porphobilinogen deaminase [Aggregatibacter aphrophilus NJ8700] Length = 308 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 105/306 (34%), Positives = 162/306 (52%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K +I TR SPLAL A + L ++ P + ++P+ TKGD I + L +IGG Sbjct: 1 MLEKTLKIATRQSPLALWQANYVKDCLQQLY--PDLIVELVPMVTKGDVILDSPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L++ E D AVHS KD+P + +GL ++ RED RD F+S++ ++ + Sbjct: 59 KGLFVKELENALLNKEADIAVHSMKDVPMQFPEGLGLAVICKREDPRDAFVSNSYRTFDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+ RL Sbjct: 119 LPQSAVVGTSSLRRQCQLKALRPDLDIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I + +E P+ GQGA+ IE ++ + ++L+ + +T V ERA L Sbjct: 179 LADRIASFIEVEQSLPAAGQGAVGIECRTDDVQVKQLLAPLADAETTCCVLAERAMNNHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I G+A + LY +V DG +A +G A+ + Sbjct: 239 QGGCQVPIGGYAVLQQGQLYLRALVGNVDGSQIIRAEGKSAVKNADVLGVQIAEQLLAQG 298 Query: 301 NKNVFN 306 + Sbjct: 299 ADKILQ 304 >gi|254781037|ref|YP_003065450.1| porphobilinogen deaminase [Candidatus Liberibacter asiaticus str. psy62] gi|254040714|gb|ACT57510.1| porphobilinogen deaminase [Candidatus Liberibacter asiaticus str. psy62] Length = 307 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 307/307 (100%), Positives = 307/307 (100%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG Sbjct: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD Sbjct: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK Sbjct: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL Sbjct: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS Sbjct: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 Query: 301 NKNVFNF 307 NKNVFNF Sbjct: 301 NKNVFNF 307 >gi|126176187|ref|YP_001052336.1| porphobilinogen deaminase [Shewanella baltica OS155] gi|153002481|ref|YP_001368162.1| porphobilinogen deaminase [Shewanella baltica OS185] gi|166217785|sp|A3D9Q4|HEM3_SHEB5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166217786|sp|A6WTG0|HEM3_SHEB8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|125999392|gb|ABN63467.1| porphobilinogen deaminase [Shewanella baltica OS155] gi|151367099|gb|ABS10099.1| porphobilinogen deaminase [Shewanella baltica OS185] Length = 310 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +S+ + Sbjct: 59 KGLFVKELEVAMLDDLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+ + R D+ + D RG + TRL KL+N + AI+LA AG+ RLK Sbjct: 119 LPLGATVGTSSLRRQCQIRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++ E+ P+ GQGA+ IE +N+ + + L+ + H +T V ERA L Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRINDERVKALLAPLEHLETRYRVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA G + G+V DG E G + +A +G A+ + Sbjct: 239 EGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTEATQLGVALAEELLSKG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKTILD 304 >gi|300714797|ref|YP_003739600.1| Porphobilinogen deaminase [Erwinia billingiae Eb661] gi|299060633|emb|CAX57740.1| Porphobilinogen deaminase [Erwinia billingiae Eb661] Length = 313 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG Sbjct: 1 MLDKILRIATRQSPLALWQAHYVQQRLMACH--PGLRVELVPMVTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ D AVHS KD+P +GL + RED D F+S+ S+ Sbjct: 59 KGLFVKELEQAMLEDRADIAVHSMKDVPIAFPEGLGLVTICEREDPLDAFVSNQYDSVDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPQGAVVGTSSLRRQCQLSARRPDLIIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ + E+ P+ GQGA+ IE +++ +A L+ +N +DT V ERA L Sbjct: 179 LGDRIRYAMPAEESLPAVGQGAVGIECRLDDAQAIALLSALNDDDTAIRVKAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA +G L+ G+V + DG R G R DA +G A+ + Sbjct: 239 EGGCQVPIGSFALLQGDELWLRGLVGSPDGTAMIRGERRGPRADAEKMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|332995105|gb|AEF05160.1| porphobilinogen deaminase [Alteromonas sp. SN2] Length = 311 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 108/304 (35%), Positives = 167/304 (54%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + RI TR S LAL A ++ L++ H + ++P+ST+GDRI + L +IGGK Sbjct: 5 KNRTIRIATRKSALALWQAEYVKAKLLEHHD--GIAVELVPMSTQGDRILDTPLAKIGGK 62 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P + +G + A RE+ D F+S+ +L L Sbjct: 63 GLFIKELEVAMLEGRADIAVHSMKDLPVEFPEGFGLHAICERENPFDAFVSNHFDNLDAL 122 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSSLRR+ + + R D+ + D RG + TRL KL+ + AI+LA AG+ RL Sbjct: 123 PEGAVVGTSSLRRQCQIRKHRPDLKIKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLGM 182 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ IK L P+ GQGA+ IE ++ + L++ +NH +T V+ ERA L+ Sbjct: 183 EERIKTGLPASVSLPAVGQGAVGIECRNDDAELIALLQALNHGETQTRVSAERAMNERLE 242 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I FA G ++ G+V DG S G +A +IG + A+ + Sbjct: 243 GGCQVPIGSFATLDGDSITLTGMVGQPDGSTLLFASATGPTKNAKSIGVEVAEALLEQGA 302 Query: 302 KNVF 305 + Sbjct: 303 GEIL 306 >gi|288550563|ref|ZP_06391088.1| hydroxymethylbilane synthase [Enterobacter cancerogenus ATCC 35316] gi|288314627|gb|EFC53565.1| hydroxymethylbilane synthase [Enterobacter cancerogenus ATCC 35316] Length = 318 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 162/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKQRLEACHS--GLRVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + R+D RD F+S+ SL Sbjct: 64 KGLFVKELELALLENRADIAVHSMKDVPVEFPQGLGLVTICERDDPRDAFVSNHYDSLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + + SV+GTSSLRR+ L R D+ + RG + TRL KL+N + AI+LA AG+KRL Sbjct: 124 MPVGSVVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLGKLDNGEYDAIILAVAGLKRLD 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + + L+ +NH+DT V ERA L Sbjct: 184 LESRIRVALPPEFSLPAVGQGAVGIECRLDDDRTRALLAPLNHDDTAIRVKAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A L+ +V A DG R G DA +G A+ + Sbjct: 244 EGGCQVPIGSYAELSNGELWLRALVGAPDGSQMVRGERRGKPQDAEALGVSLAEELLNNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|260551059|ref|ZP_05825263.1| porphobilinogen deaminase [Acinetobacter sp. RUH2624] gi|260405826|gb|EEW99314.1| porphobilinogen deaminase [Acinetobacter sp. RUH2624] Length = 314 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 108/302 (35%), Positives = 171/302 (56%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL Sbjct: 11 KTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 69 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ +L+ R D+ ++D RG + TRL+KL++ + AI+LA AG+KRL E+ Sbjct: 129 GAKVGTSSLRRKSQILKQRPDLQIVDLRGNVGTRLSKLDDGQYDAIILASAGLKRLGLEE 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ + P+ GQGA+ +E ++ L++ + H +T V ERAF A L+G Sbjct: 189 RIRHCIEPSVSLPAVGQGALGLECRADDQDVLALIQPLLHTETDVCVRAERAFNAYLEGG 248 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IAG+A + ++ G V + DG+ +A +G + A+ + + Sbjct: 249 CQVPIAGYATLQDGKIHIEGRVGSPDGQTLLRAELTDEAHNAQQLGENLARNLLEQGAGD 308 Query: 304 VF 305 + Sbjct: 309 LL 310 >gi|269137476|ref|YP_003294176.1| porphobilinogen deaminase [Edwardsiella tarda EIB202] gi|267983136|gb|ACY82965.1| porphobilinogen deaminase [Edwardsiella tarda EIB202] gi|304557549|gb|ADM40213.1| Porphobilinogen deaminase [Edwardsiella tarda FL6-60] Length = 317 Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 158/305 (51%), Gaps = 2/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RI TR SPLAL A R L + P I ++P+ T+GD + + L ++GGK Sbjct: 8 TQPTLRIATRQSPLALWQAHYVRDQL--LTHWPQLTIELVPMVTRGDVLLDTPLAKVGGK 65 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L+ G D AVHS KD+P GL + RED RD F+S SL+ L Sbjct: 66 GLFVKELELALLEGRADIAVHSMKDVPVAFPDGLGLVTICQREDPRDAFVSPRFASLEQL 125 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SV+GTSSLRR+ L R D+ + D RG + TRL KL+ AI+LA AG+KRL+ Sbjct: 126 PPGSVVGTSSLRRQCQLRAARPDLQIRDLRGNVGTRLAKLDAGDYDAIILAAAGLKRLQL 185 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I+ L E P+ GQGA+ IE + + + L+ +NH DT V ERA L+ Sbjct: 186 DDRIRTPLTPEQSLPAVGQGAVGIECRLADDATRRLLAPLNHADTALRVCAERAMNTRLE 245 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I +A G L+ +V A DG R G A +G A + Sbjct: 246 GGCQVPIGSYAEIDGDQLWLRALVGAPDGSRIIRGERRGPLTQAEAMGTALADELLARGA 305 Query: 302 KNVFN 306 + + + Sbjct: 306 RTILD 310 >gi|120600512|ref|YP_965086.1| porphobilinogen deaminase [Shewanella sp. W3-18-1] gi|146294670|ref|YP_001185094.1| porphobilinogen deaminase [Shewanella putrefaciens CN-32] gi|158512986|sp|A1RPD7|HEM3_SHESW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166217787|sp|A4YBG2|HEM3_SHEPC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|120560605|gb|ABM26532.1| porphobilinogen deaminase [Shewanella sp. W3-18-1] gi|145566360|gb|ABP77295.1| porphobilinogen deaminase [Shewanella putrefaciens CN-32] gi|319427906|gb|ADV55980.1| porphobilinogen deaminase [Shewanella putrefaciens 200] Length = 310 Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ + D AVHS KD+P +GL + RED RD F+S+ +++ + Sbjct: 59 KGLFVKELEVAILEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNIYKTISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+ RLK Sbjct: 119 LPLGATVGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I ++ E P+ GQGA+ IE N+ + + L+ + H +T V ERA L Sbjct: 179 LSGRIASFISAEQSLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA G + G+V DG E G + +A +G A+ + Sbjct: 239 EGGCQVPIGAFAEINGDEMTLRGLVGNPDGSEIIEGIITGPKTEATQLGVALAEELLSKG 298 Query: 301 NKNVFN 306 K++ + Sbjct: 299 AKSILD 304 >gi|296105312|ref|YP_003615458.1| hydroxymethylbilane synthase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059771|gb|ADF64509.1| hydroxymethylbilane synthase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 313 Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 161/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKQRLEACHS--GLRVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQFDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPKGSVVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH++T V ERA L Sbjct: 179 LESRIRVALPPELSLPAVGQGAVGIECRLDDRRTRELLAPLNHDETAIRVKAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A L+ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELINGELWLRALVGAPDGSQMVRGERRGKPQDAEQLGISLAEELLDNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|262040885|ref|ZP_06014111.1| hydroxymethylbilane synthase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041774|gb|EEW42819.1| hydroxymethylbilane synthase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 318 Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 168/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +I TR SPLAL A ++ L H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLKVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + + L + R+D RD F+S+ S+ + Sbjct: 64 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPECLGLVTICERDDPRDAFVSNRYASIDE 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+++ RG + TRL+KL+N + AI+LA AG+KRL+ Sbjct: 124 LPAGSVVGTSSLRRQCQLAATRPDLAIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLQ 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L+ E P+ GQGA+ IE +++ + L+ +NH +T V ERA L Sbjct: 184 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTRGLLAPLNHTETAVRVRAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A K L+ +V A DG R G A +G A+ + Sbjct: 244 EGGCQVPIGSYAELKDGELWLRALVGAPDGSQLVRGERRGPAEQAEALGISLAEELLDNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|332290269|ref|YP_004421121.1| porphobilinogen deaminase [Gallibacterium anatis UMN179] gi|330433165|gb|AEC18224.1| porphobilinogen deaminase [Gallibacterium anatis UMN179] Length = 309 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+K RI TR SPLAL A + L ++ P + ++ + TKGD + + L +IGG Sbjct: 1 MQKDVLRIATRQSPLALWQANYIKHKLQVLY--PQLTVELVTMVTKGDVLLDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P + +GL +S RED RD F+S+ SL + Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPMQFPQGLHLSVICEREDPRDAFVSNRYASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++V+GTSSLRR+ L R DI + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPQNAVVGTSSLRRQCQLKALRPDIELKTLRGNVGTRLRKLDEGEYDAIILASAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +++ I+ + E P+ GQGA+ +E ++ +L+K + H+DTWD V ERA L Sbjct: 179 EQQRIRSFIAPEVSLPAVGQGAVGVECRQDDEWVNQLLKPLLHQDTWDRVIAERAMNNRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A G L+ +V A DG R A +G A+ + Sbjct: 239 QGGCQVPIAGYAILDGEQLFLRALVGAVDGSKVLRAEATAVRSQAEQLGIQVAEMLLAQG 298 Query: 301 NKNVF 305 +++ Sbjct: 299 AQDLL 303 >gi|315178740|gb|ADT85654.1| porphobilinogen deaminase [Vibrio furnissii NCTC 11218] Length = 312 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 110/304 (36%), Positives = 167/304 (54%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 P RI TR SPLAL A + +L H P + ++ + T+GD I + L ++GGK Sbjct: 3 STTPIRIATRQSPLALWQAHFVKDALQAAH--PGLEVELVTMVTRGDVILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T SL +L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYASLDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +++GT SLRR+ L R D+ + + RG + TRL KL+ + AI+LA AG+KRLK Sbjct: 121 PHGAIVGTCSLRRQCQLKEARPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I+ ++ E P+ GQGA+ IE +++ + + L+ ++ DT D V CERA L+ Sbjct: 181 EQRIRSLIEPEQSLPAVGQGAVGIECRLDDARLRALLAPLSDADTTDRVLCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I +A G L+ +V DG G R DA +G + A + Sbjct: 241 GGCQVPIGSYALLDGDDLWLRALVGEPDGSHIVRGEIRGPRQDAERLGVELANQLLADGA 300 Query: 302 KNVF 305 +++ Sbjct: 301 RDIL 304 >gi|229593301|ref|YP_002875420.1| porphobilinogen deaminase [Pseudomonas fluorescens SBW25] gi|259646262|sp|C3K424|HEM3_PSEFS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|229365167|emb|CAY53424.1| porphobilinogen deaminase [Pseudomonas fluorescens SBW25] Length = 313 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 116/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLKVSLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYASLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPLGSIVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I +++ED P+ GQGA+ IE + L+K ++H DT V ERA L Sbjct: 179 FEDRITSAISVEDSLPAGGQGAVGIECRTADSDIHALLKPLDHHDTEVRVTAERALNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V +G G +CDA +G AQ + Sbjct: 239 NGGCQVPIACYAVLEGENLWLRGLVGDPEGGNLLTAEVRGPQCDATALGIQVAQALLDKG 298 Query: 301 NKNVFN 306 + Sbjct: 299 AGAILQ 304 >gi|212710180|ref|ZP_03318308.1| hypothetical protein PROVALCAL_01234 [Providencia alcalifaciens DSM 30120] gi|212687179|gb|EEB46707.1| hypothetical protein PROVALCAL_01234 [Providencia alcalifaciens DSM 30120] Length = 314 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 112/304 (36%), Positives = 169/304 (55%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 RI TR SPLAL A+ ++ L +H + ++P+ TKGD I + L ++GGK Sbjct: 3 STNIVRIATRKSPLALWQAYFVKAKLEQLHS--GLQVELVPMVTKGDIILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L+ G D AVHS KD+P + +GL + RED RD F+S+ ++ L Sbjct: 61 GLFVKELELALLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYANIDAL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 S++GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL+ Sbjct: 121 PAGSIVGTSSLRRQCQLRELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLEL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 ++ IK L E P+ GQGA+ IE +N+ + ++L+ +NH+ T V ERA L+ Sbjct: 181 DERIKTALEPEQSLPAVGQGAVGIECRLNDQRTRDLLAKLNHDATSICVLAERAMNMRLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I +A +G ++ +V A DG R DAI G A+ + Sbjct: 241 GGCQVPIGSYAIWQGDKIWLRALVGAPDGSQVIRGERLIAPVDAIQAGISLAEELLNKGA 300 Query: 302 KNVF 305 + + Sbjct: 301 REIL 304 >gi|260771623|ref|ZP_05880543.1| porphobilinogen deaminase [Vibrio metschnikovii CIP 69.14] gi|260613400|gb|EEX38599.1| porphobilinogen deaminase [Vibrio metschnikovii CIP 69.14] Length = 312 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 P RI TR SPLAL A + +L H P + ++ + T+GD + + L ++GGK Sbjct: 3 STPPIRIATRQSPLALWQAHFVKDALQAAH--PHLAVELVTMVTRGDVLLDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T SL+ L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYHSLEAL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +++GT SLRR+ + R DI + + RG + TRL KL+ + AI+LA AG+KRLK Sbjct: 121 PHGAIVGTCSLRRQCQIKAARPDIIIKELRGNVGTRLAKLDAGEFDAIVLAAAGLKRLKL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I ++ E P+ GQGA+ IE +++ + L++ +NH DT+D V CERA L Sbjct: 181 EQRIASFISPEQSLPAVGQGAVGIECRLDDQRLLTLLEPLNHADTYDRVICERAMNLTLQ 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I + G ++ +V DG G R A +G + AQ + Sbjct: 241 GGCQVPIGSYTELDGEQIWLRALVGEPDGSRIIRGEIRGPRQQAERLGVELAQQLLDQGA 300 Query: 302 KNVFN 306 +++ N Sbjct: 301 RDILN 305 >gi|260767548|ref|ZP_05876484.1| porphobilinogen deaminase [Vibrio furnissii CIP 102972] gi|260617448|gb|EEX42631.1| porphobilinogen deaminase [Vibrio furnissii CIP 102972] Length = 312 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 109/304 (35%), Positives = 167/304 (54%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 P RI TR SPLAL A + +L H P + ++ + T+GD I + L ++GGK Sbjct: 3 STTPIRIATRQSPLALWQAHFVKDALQAAH--PGLEVELVTMVTRGDVILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T SL +L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYASLDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +++GT SLRR+ L R D+ + + RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 121 PHGAIVGTCSLRRQCQLKEARPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLQL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I+ ++ E P+ GQGA+ IE +++ + + L+ ++ DT D V CERA L+ Sbjct: 181 EQRIRSLIEPEQSLPAVGQGAVGIECRLDDARLRALLAPLSDADTTDRVLCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I +A G L+ +V DG G R DA +G + A + Sbjct: 241 GGCQVPIGSYALLDGDDLWLRALVGEPDGSHIVRGEIRGPRQDAERLGVELANQLLADGA 300 Query: 302 KNVF 305 +++ Sbjct: 301 RDIL 304 >gi|260556364|ref|ZP_05828583.1| porphobilinogen deaminase [Acinetobacter baumannii ATCC 19606] gi|260410419|gb|EEX03718.1| porphobilinogen deaminase [Acinetobacter baumannii ATCC 19606] Length = 314 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 108/302 (35%), Positives = 170/302 (56%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL Sbjct: 11 KTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 69 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL + Sbjct: 129 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G Sbjct: 189 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGG 248 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IAG+A + ++ G V + DG+ +A +G + A+ + + Sbjct: 249 CQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAGD 308 Query: 304 VF 305 + Sbjct: 309 LL 310 >gi|293610070|ref|ZP_06692371.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827302|gb|EFF85666.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 314 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 109/302 (36%), Positives = 167/302 (55%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL Sbjct: 11 KTLKIATRQSPLALWQAEHIRARLEELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 69 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL+ + AI+LA AG+KRL + Sbjct: 129 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDEGQYDAIILASAGLKRLGLSE 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L + P+ GQGA+ +E + L++ + H +T V ERAF A L+G Sbjct: 189 RIRHCLTPDISLPAVGQGALGLECRAADQDVLALIQPLLHAETDVCVRAERAFNAYLEGG 248 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IAG+A + ++ G V + DG+ +A +G + A+ + Sbjct: 249 CQVPIAGYATLQNGQIHIEGRVGSPDGQTLLRAELTDEANNAQQLGENLARNLLDQGAGE 308 Query: 304 VF 305 + Sbjct: 309 LL 310 >gi|146313619|ref|YP_001178693.1| porphobilinogen deaminase [Enterobacter sp. 638] gi|167008813|sp|A4WG12|HEM3_ENT38 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|145320495|gb|ABP62642.1| hydroxymethylbilane synthase [Enterobacter sp. 638] Length = 313 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H+ + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAQYVKQRLEACHQ--GLRVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL D Sbjct: 59 KGLFVKELEIALLENRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNRYASLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPKGSVVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE +++ + + L+ +NH++T V ERA L Sbjct: 179 LESRIRVAMPPELCLPAVGQGAVGIECRLDDDRTRALLSPLNHDETAIRVQAERAMNMRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A L+ +V A DG R G DA +G A + Sbjct: 239 EGGCQVPIGSYAELINGELWLRALVGAPDGSQMVRGERRGLPQDAEMLGISLADELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARAIL 303 >gi|89093768|ref|ZP_01166714.1| porphobilinogen deaminase [Oceanospirillum sp. MED92] gi|89081898|gb|EAR61124.1| porphobilinogen deaminase [Oceanospirillum sp. MED92] Length = 313 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 108/306 (35%), Positives = 176/306 (57%), Gaps = 4/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RI TR SPLAL A ++ L H P N+ ++ +++KGD+I + L ++GGKG Sbjct: 2 SRTIRIATRKSPLALWQAEYVKAELERHH--PGINVELLGMTSKGDKILDAPLAKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E+ +++GE D AVHS KD+P + +GL ++ PRE D F+S+T S+++L Sbjct: 60 LFVKELEEAMLAGEADIAVHSMKDVPMEFPEGLGLAVICPREQPTDAFVSNTYNSIEELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+A + R D+ + RG + TRL KL++ + AI+LA AG+ RL+ Sbjct: 120 EGAVVGTSSLRREAQIREKRPDLQIKWLRGNVNTRLRKLDDGEYDAIILASAGLIRLEMP 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ +++E P+ GQGA+ IE ++ + EL+K ++ ++T V+ ERA L+G Sbjct: 180 ERIRSEISVEFSLPAGGQGAVGIECRTDDHELLELLKPLHDQETAWRVSAERAMNRRLEG 239 Query: 243 SCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C+ IA +A LY G+V DG + G A +G A + Sbjct: 240 GCQVPIACYATLNDDNSELYLRGLVAKPDGTLILRDEERGTPEQAEQLGITLADRLLAAG 299 Query: 301 NKNVFN 306 K++ + Sbjct: 300 AKSILD 305 >gi|299771850|ref|YP_003733876.1| porphobilinogen deaminase [Acinetobacter sp. DR1] gi|298701938|gb|ADI92503.1| porphobilinogen deaminase [Acinetobacter sp. DR1] Length = 309 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 110/302 (36%), Positives = 169/302 (55%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL Sbjct: 6 KTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 64 FVKELEAALLDGRADLAVHSMKDVPMALPEGLSLAVICEREDPLDAFVSNQFEKFADLPQ 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL + Sbjct: 124 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLSE 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L + P+ GQGA+ +E + L++ + HE+T V ERAF A L+G Sbjct: 184 RIRHCLTPDISLPAVGQGALGLECRAADQDVLALIQPLLHEETDVCVRAERAFNAYLEGG 243 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IAG+A + ++ G V + DG+ +A +G + A+ + Sbjct: 244 CQVPIAGYATLQNGQIHIEGRVGSPDGQTLLRAELTDEASNAHQLGENLARNLLDQGAGE 303 Query: 304 VF 305 + Sbjct: 304 LL 305 >gi|242237686|ref|YP_002985867.1| porphobilinogen deaminase [Dickeya dadantii Ech703] gi|242129743|gb|ACS84045.1| porphobilinogen deaminase [Dickeya dadantii Ech703] Length = 313 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 108/306 (35%), Positives = 162/306 (52%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H P + ++P+ T+GD + + L ++GG Sbjct: 1 MVDNILRIATRQSPLALWQAHYVQQRLQACH--PGLRVELVPMVTRGDVLLDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + L + R+D RD F+S+ +L Sbjct: 59 KGLFVKELELALLEDRADIAVHSMKDVPVEFPAQLGLVTICERDDPRDAFVSNRYANLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+ RL Sbjct: 119 LPPGAVVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLGKLDNGDYDAIILAVAGLNRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L+ E P+ GQGA+ +E +++ + + L+ +NH+DT V ERA L Sbjct: 179 LEGRIRAALSPEQSLPAVGQGAVGVECRLDDTRTRALLAPLNHDDTAARVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G ++ +V + DG R G R DA +G A + Sbjct: 239 EGGCQVPIGSYAELQGDAIWLRALVGSPDGSRIIRGERTGRRQDAEQLGISLADELLAAG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 AREILQ 304 >gi|283787518|ref|YP_003367383.1| porphobilinogen deaminase [Citrobacter rodentium ICC168] gi|282950972|emb|CBG90649.1| porphobilinogen deaminase [Citrobacter rodentium ICC168] Length = 313 Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDALMANH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLEKRADIAVHSMKDVPVEFPAGLGLVTICEREDPRDAFVSNNYPSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + Q L+ +N E T V ERA L Sbjct: 179 LESRIRAALPPEVSLPAVGQGAVGIECRLDDRRTQALLAPLNDEITALRVKAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A L+ +V A DG + R G+ A +G A+ + Sbjct: 239 EGGCQVPIGSYAEMIDGELWLRALVGAPDGSLMVRGERRGSPEQAEQMGISLAEELLDNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARAIL 303 >gi|239502040|ref|ZP_04661350.1| porphobilinogen deaminase [Acinetobacter baumannii AB900] Length = 309 Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 109/302 (36%), Positives = 170/302 (56%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL Sbjct: 6 KTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 64 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL + Sbjct: 124 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G Sbjct: 184 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGG 243 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IAG+A + +Y G V + DG+ +A +G + A+ + + Sbjct: 244 CQVPIAGYATLQDGKIYIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAGD 303 Query: 304 VF 305 + Sbjct: 304 LL 305 >gi|257465324|ref|ZP_05629695.1| porphobilinogen deaminase [Actinobacillus minor 202] gi|257450984|gb|EEV25027.1| porphobilinogen deaminase [Actinobacillus minor 202] Length = 308 Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 109/303 (35%), Positives = 159/303 (52%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR SPLAL A ++ L P I ++ + TKGD I + L +IGGKG Sbjct: 2 KDILRIATRQSPLALWQANFVKAELEK--HFPELQIELVTMVTKGDIILDTPLAKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ QSL L Sbjct: 60 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNQYQSLDKLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+ L+ + + RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 120 KGAVVGTSSLRRQCQLMAAYPHLEIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMP 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ +++E P+ GQGA+ IET +++ + + +NH+ T V ERA A L G Sbjct: 180 ERIRSFISVEQSLPAAGQGAVGIETRLDDQRVLSYLAKLNHQPTAYRVIAERAMNAHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I GFA + L +V + DG S A +G + A + Sbjct: 240 GCQVPIGGFATLENDELTLNALVGSLDGSTIIRASGVAPVDKAEQLGIEVATKLLAQGAD 299 Query: 303 NVF 305 + Sbjct: 300 KIL 302 >gi|169797472|ref|YP_001715265.1| porphobilinogen deaminase [Acinetobacter baumannii AYE] gi|213155714|ref|YP_002317759.1| porphobilinogen deaminase [Acinetobacter baumannii AB0057] gi|169150399|emb|CAM88296.1| porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Acinetobacter baumannii AYE] gi|213054874|gb|ACJ39776.1| porphobilinogen deaminase [Acinetobacter baumannii AB0057] Length = 314 Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 108/302 (35%), Positives = 169/302 (55%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L + H P + ++ T+GD+I + L +IGGKGL Sbjct: 11 KTLKIATRQSPLALWQAEHIRARLQERH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 69 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL + Sbjct: 129 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G Sbjct: 189 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGG 248 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IAG+A + ++ G V + DG+ +A +G + A+ + + Sbjct: 249 CQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAGD 308 Query: 304 VF 305 + Sbjct: 309 LL 310 >gi|193076128|gb|ABO10737.2| porphobilinogen deaminase [Acinetobacter baumannii ATCC 17978] Length = 309 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 108/302 (35%), Positives = 170/302 (56%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL Sbjct: 6 KTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 64 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL + Sbjct: 124 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G Sbjct: 184 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGG 243 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IAG+A + ++ G V + DG+ +A +G + A+ + + Sbjct: 244 CQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAGD 303 Query: 304 VF 305 + Sbjct: 304 LL 305 >gi|152978040|ref|YP_001343669.1| porphobilinogen deaminase [Actinobacillus succinogenes 130Z] gi|189042873|sp|A6VL87|HEM3_ACTSZ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|150839763|gb|ABR73734.1| porphobilinogen deaminase [Actinobacillus succinogenes 130Z] Length = 309 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 168/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+++ +I TR SPLAL A + L +++ P + ++P+ TKGD I + L +IGG Sbjct: 1 MQQEILKIATRQSPLALWQANFVKDRLTEIY--PDLTVELVPMVTKGDVILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L++G+ D AVHS KD+P + GL +S RED RD F+S+ ++L D Sbjct: 59 KGLFVKELENALLNGDADIAVHSMKDVPMEFPAGLGLSVICKREDPRDAFVSNRYRTLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L + R D+++ RG + TRL+KL+ AI+LA AG+ RL Sbjct: 119 LPPGAIVGTSSLRRQCQLKKRRPDLNIRSLRGNVGTRLSKLDQGDYDAIILASAGLIRLA 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I + E P+ GQGA+ IE +N+ + Q+L+ + +T V ERA L Sbjct: 179 LPERIASFIETEISLPAAGQGAVGIECRINDQRVQKLLAPLADTETTACVLAERAMNNRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I G+A G+ L+ +V A DG +A +G A+ + Sbjct: 239 QGGCQVPIGGYAVLNGNELHLRALVGALDGSKIIRAEGKSAVENAEVLGIQIAESLLAQG 298 Query: 301 NKNVF 305 + Sbjct: 299 ADKIL 303 >gi|184156604|ref|YP_001844943.1| porphobilinogen deaminase [Acinetobacter baumannii ACICU] gi|332874912|ref|ZP_08442763.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6014059] gi|183208198|gb|ACC55596.1| Porphobilinogen deaminase [Acinetobacter baumannii ACICU] gi|322506491|gb|ADX01945.1| hemC [Acinetobacter baumannii 1656-2] gi|323516370|gb|ADX90751.1| porphobilinogen deaminase [Acinetobacter baumannii TCDC-AB0715] gi|332736855|gb|EGJ67831.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6014059] Length = 309 Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats. Identities = 108/302 (35%), Positives = 170/302 (56%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL Sbjct: 6 KTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 64 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL + Sbjct: 124 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G Sbjct: 184 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLTLIQPLLHPETDVCVRAERAFNAYLEGG 243 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IAG+A + ++ G V + DG+ +A +G + A+ + + Sbjct: 244 CQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAGD 303 Query: 304 VF 305 + Sbjct: 304 LL 305 >gi|325124236|gb|ADY83759.1| porphobilinogen deaminase [Acinetobacter calcoaceticus PHEA-2] Length = 309 Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats. Identities = 110/302 (36%), Positives = 169/302 (55%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL Sbjct: 6 KTLKIATRQSPLALWQAEHIRARLEELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ ++ DL Sbjct: 64 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNRFETFADLPQ 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL+ + AI+LA AG+KRL + Sbjct: 124 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDEGQYDAIILASAGLKRLGLSE 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L + P+ GQGA+ +E + L++ + HE+T V ERAF A L+G Sbjct: 184 RIRHCLTPDISLPAVGQGALGLECRAVDQDVLALIQPLLHEETDVCVRAERAFNAYLEGG 243 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IAG+A + ++ G V + DG+ +A +G + A+ + Sbjct: 244 CQVPIAGYATLQNGQIHIEGRVGSPDGQTLLRAELTDEANNAQQLGENLARNLLDQGAGE 303 Query: 304 VF 305 + Sbjct: 304 LL 305 >gi|169634609|ref|YP_001708345.1| porphobilinogen deaminase [Acinetobacter baumannii SDF] gi|169153401|emb|CAP02532.1| porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Acinetobacter baumannii] Length = 314 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 107/302 (35%), Positives = 169/302 (55%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A + L ++H P + ++ T+GD+I + L +IGGKGL Sbjct: 11 KTLKIATRQSPLALWQAEHICARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 69 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL + Sbjct: 129 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G Sbjct: 189 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDICVRAERAFNAYLEGG 248 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IAG+A + ++ G V + DG+ +A +G + A+ + + Sbjct: 249 CQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAGD 308 Query: 304 VF 305 + Sbjct: 309 LL 310 >gi|119469646|ref|ZP_01612515.1| porphobilinogen deaminase [Alteromonadales bacterium TW-7] gi|119446893|gb|EAW28164.1| porphobilinogen deaminase [Alteromonadales bacterium TW-7] Length = 312 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 107/307 (34%), Positives = 164/307 (53%), Gaps = 4/307 (1%) Query: 1 MEKKP--FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M +K RI TR S LAL A ++ L H + ++P+ST+GD I + L +I Sbjct: 1 MTEKTKLVRIATRKSALALWQAEFVKAQLEHFHD--DVRVELVPMSTQGDIILDTPLAKI 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLF +E+E+ ++ G D AVHS KD+P + +GL + RED RD F+S+ +L Sbjct: 59 GGKGLFVKELEQAMLDGRADIAVHSMKDVPVEFPEGLALHTICEREDPRDAFVSNHFANL 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ + AI+LA AG+ R Sbjct: 119 NELPEGAVVGTSSLRRQCQIRALRPDLEIRDLRGNVNTRLAKLDAGQYDAIILAAAGLIR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L+ + I + + E P+ GQGA+ IE + + + L+ + H T VN ERA Sbjct: 179 LEMGERIADYIEPEVSLPANGQGAVGIECRIEDEVTKALLAPLEHTHTRIRVNAERAMNR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+G C+ I +A ++ G+V A DG G+ DA +G + A+ + Sbjct: 239 RLEGGCQVPIGAYALVDSEQVHLRGLVGAIDGSEILRDEVAGHINDAEKLGIELAEKLLA 298 Query: 299 ISNKNVF 305 + Sbjct: 299 QGADKIL 305 >gi|262280694|ref|ZP_06058477.1| porphobilinogen deaminase [Acinetobacter calcoaceticus RUH2202] gi|262257594|gb|EEY76329.1| porphobilinogen deaminase [Acinetobacter calcoaceticus RUH2202] Length = 314 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 111/302 (36%), Positives = 171/302 (56%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGL Sbjct: 11 KTLKIATRQSPLALWQAEYIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 69 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ +L+ R D+ VID RG + TRL KL++ + AI+LA AG+KRL + Sbjct: 129 GAKVGTSSLRRKSQILKQRPDLQVIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLSE 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L + P+ GQGA+ +E + + L++ + HE+T V ERAF A L+G Sbjct: 189 RIRHCLTPDISLPAVGQGALGLECRAADNEVLSLIQPLLHEETDVCVRAERAFNAYLEGG 248 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IAG+A + ++ G V ++DG+ +A +G + A+ + Sbjct: 249 CQVPIAGYATLQNGQIHIEGRVGSADGQTLLRAELTDEASNAHQLGENLARNLLDQGAGE 308 Query: 304 VF 305 + Sbjct: 309 LL 310 >gi|157829875|pdb|1AH5|A Chain A, Reduced Form Selenomethionine-Labelled Hydroxymethylbilane Synthase Determined By Mad Length = 313 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H P + ++P T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLXASH--PGLVVELVPXVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSXKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAXNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQXGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|120553424|ref|YP_957775.1| porphobilinogen deaminase [Marinobacter aquaeolei VT8] gi|166217776|sp|A1TXW9|HEM3_MARAV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|120323273|gb|ABM17588.1| hydroxymethylbilane synthase [Marinobacter aquaeolei VT8] Length = 313 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 171/306 (55%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K+ RI TR S LAL A ++ L +H ++ +I + T+GD+I + L +IGG Sbjct: 1 MSKRTLRIATRSSALALWQAEFIKAELERLHD--NVDVELIKIKTQGDKILDVPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P + +GL + A RED D F+S+ + + Sbjct: 59 KGLFVKELEEAMLDGRADLAVHSMKDVPMEFPEGLGLVAICEREDPTDAFVSNQYEHIDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT+SLRR+A L R D+ + RG + TRL KL+ + AI+LA +G+KRL Sbjct: 119 LPEGAVVGTASLRREAQLRANRPDLQIKVLRGNVNTRLAKLDAGEYDAIVLASSGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ L P+ GQGA+ IE V + + EL+ +NH DTWD V+ ERA L Sbjct: 179 FHDRIRYCLPDTFSLPAVGQGALGIECRVGDTELLELIDPLNHTDTWDRVSAERALNRRL 238 Query: 241 DGSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ IA +A + TL+ G+V A DG V R + +GR+ A+ + + Sbjct: 239 EGGCQVPIAAYALLEDDNTLWLRGLVGAVDGTQIFRVEGRAPRAEGERLGRELAEQLLSM 298 Query: 300 SNKNVF 305 V Sbjct: 299 GADKVL 304 >gi|330720492|gb|EGG98789.1| Porphobilinogen deaminase [gamma proteobacterium IMCC2047] Length = 312 Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 111/307 (36%), Positives = 162/307 (52%), Gaps = 3/307 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR S LAL A ++ L H+ + + + T+GD+I + L ++GG Sbjct: 1 MTNKLLRIATRGSQLALWQAEYVKARLEAAHE--NLQVELDIMKTRGDKILDVPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL ++ RE D F+S+ S Sbjct: 59 KGLFVKELETALLEKRADIAVHSMKDVPMEFPEGLGLAVICEREQPTDAFVSNHFASFDS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R DI++ RG + TRL KL++ + AI+LA AG+ RL Sbjct: 119 LPQGAVVGTSSLRRQCHIRALRPDINIEFLRGNVNTRLAKLDDGQFDAIILASAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E L+IE P+ GQGA+ +E V++ L+ V++ EDT V ERA L Sbjct: 179 MGDRITEQLSIEQSLPAAGQGAVGVECRVDDKDTLALLSVLHDEDTSICVTAERAMNRHL 238 Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ IAGFA +G +Y G+V DG G DA IG A + Sbjct: 239 NGGCQVPIAGFAVLEEGGQVYLQGMVANPDGDEVLRAELRGPVADAEQIGIRVADDLLSQ 298 Query: 300 SNKNVFN 306 + + + Sbjct: 299 GAQAILD 305 >gi|215484908|ref|YP_002327147.1| porphobilinogen deaminase [Acinetobacter baumannii AB307-0294] gi|301346814|ref|ZP_07227555.1| porphobilinogen deaminase [Acinetobacter baumannii AB056] gi|301512648|ref|ZP_07237885.1| porphobilinogen deaminase [Acinetobacter baumannii AB058] gi|301595532|ref|ZP_07240540.1| porphobilinogen deaminase [Acinetobacter baumannii AB059] gi|332851472|ref|ZP_08433469.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6013150] gi|332866846|ref|ZP_08437233.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6013113] gi|213987600|gb|ACJ57899.1| porphobilinogen deaminase [Acinetobacter baumannii AB307-0294] gi|332729925|gb|EGJ61256.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6013150] gi|332734374|gb|EGJ65495.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6013113] Length = 309 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 108/302 (35%), Positives = 169/302 (55%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L + H P + ++ T+GD+I + L +IGGKGL Sbjct: 6 KTLKIATRQSPLALWQAEHIRARLQERH--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 64 FVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQ 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL + Sbjct: 124 GAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAE 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G Sbjct: 184 RIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGG 243 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IAG+A + ++ G V + DG+ +A +G + A+ + + Sbjct: 244 CQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAGD 303 Query: 304 VF 305 + Sbjct: 304 LL 305 >gi|325576792|ref|ZP_08147407.1| hydroxymethylbilane synthase [Haemophilus parainfluenzae ATCC 33392] gi|325160998|gb|EGC73116.1| hydroxymethylbilane synthase [Haemophilus parainfluenzae ATCC 33392] Length = 310 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 107/302 (35%), Positives = 163/302 (53%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A + L H P ++ ++P+ TKGD I + L +IGGKGL Sbjct: 5 KTLKIATRQSPLALWQANFVKDQLEKFH--PTLSVELVPMVTKGDVILDSPLAKIGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ D AVHS KD+P + +GL +S RED RD F+S+T +SL DL Sbjct: 63 FVKELENALLEKRADIAVHSMKDVPMEFPEGLGLSVICKREDPRDAFVSNTYRSLDDLPQ 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+ L + R D+ + RG + TRL+KL+N + AI+LA AG+ RL + Sbjct: 123 GAIVGTSSLRRQCQLKQLRPDLDIRSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGLAE 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + +E P+ GQGA+ IE V++ + + L+ ++ T V ERA L G Sbjct: 183 RIASFIEVEQSLPAAGQGAVGIECRVDDEEVKALLAPLSDATTTTCVLAERAMNTRLQGG 242 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I G+A + ++ +V +DG +A +G A+ + Sbjct: 243 CQVPIGGYAIEQNGEIFLRALVGETDGSAIIRAEGKSAVENAEALGVSIAEQLLAQGADK 302 Query: 304 VF 305 + Sbjct: 303 IL 304 >gi|238918086|ref|YP_002931600.1| porphobilinogen deaminase, [Edwardsiella ictaluri 93-146] gi|238867654|gb|ACR67365.1| porphobilinogen deaminase, putative [Edwardsiella ictaluri 93-146] Length = 317 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 160/305 (52%), Gaps = 2/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RI TR SPLAL A R L+ + P I ++P+ T+GD + + L ++GGK Sbjct: 8 TQPTLRIATRQSPLALWQAHYVRDQLLA--QWPQLTIELVPMVTRGDVLLDTPLAKVGGK 65 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L+ G D AVHS KD+P GL + RED RD F+S SL+ L Sbjct: 66 GLFVKELELALLEGRADIAVHSMKDVPVAFPDGLGLVTICQREDPRDAFVSPRFASLEQL 125 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SV+GTSSLRR+ L R D+ + D RG + TRL KL+ AI+LA AG+KRL+ Sbjct: 126 PPGSVVGTSSLRRQCQLRAARPDLQIRDLRGNVGTRLAKLDAGDYDAIILAAAGLKRLQL 185 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I+ L E P+ GQGA+ IE + + + L+ +NH +T V ERA L+ Sbjct: 186 EDRIRTPLTPEQSLPAVGQGAVGIECRLADDATRRLLAPLNHAETALRVCAERAMNTRLE 245 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I +A G L+ +V A DG + R G A +G A + Sbjct: 246 GGCQVPIGSYAEIDGDRLWLRALVGAPDGSLMICGERRGPLAQAEAMGTALADELLARGA 305 Query: 302 KNVFN 306 + + + Sbjct: 306 RAILD 310 >gi|53802806|ref|YP_115447.1| porphobilinogen deaminase [Methylococcus capsulatus str. Bath] gi|53756567|gb|AAU90858.1| porphobilinogen deaminase [Methylococcus capsulatus str. Bath] Length = 351 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 112/304 (36%), Positives = 163/304 (53%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 RI TR SPLAL A S L H P + ++ ++T+GD++ + L ++GGK Sbjct: 43 ASHTLRIATRKSPLALWQAEYVASRLRAAH--PDLRVELVGMTTRGDKLLDAPLAKVGGK 100 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E+ L+ G D AVHS KD+P + +GL ++A L RED RD +SH +S +L Sbjct: 101 GLFVKELEQGLLEGRADIAVHSMKDVPVEFPEGLHLAAILEREDPRDALVSHRYRSFAEL 160 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSSLRR+ + S+ D RG + TRL KL+ + AI+LA AG+KRL Sbjct: 161 PADARIGTSSLRRQCQIKCRLPGCSLYDLRGNVNTRLAKLDAGEFDAIVLASAGLKRLGF 220 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 ++ I E L E P+ GQGAI +E + + L+ ++H T V ERA LD Sbjct: 221 QERIAETLTPEQCLPAIGQGAIGVECRSTDTRTNALLVPLHHPPTAWCVLAERAMNRRLD 280 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ IAGFA +G TL G+V DG G+ +G+ A+++ Sbjct: 281 GGCQVPIAGFAQLEGDTLSLRGLVGNPDGSGIIRAEAVGHPSTFEALGKRVAEHLLDQGA 340 Query: 302 KNVF 305 + Sbjct: 341 DEIL 344 >gi|85711585|ref|ZP_01042643.1| Porphobilinogen deaminase [Idiomarina baltica OS145] gi|85694737|gb|EAQ32677.1| Porphobilinogen deaminase [Idiomarina baltica OS145] Length = 310 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 102/303 (33%), Positives = 157/303 (51%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR S LA+ A ++ L ++ P I ++P+ST+GD I + L +IGGKG Sbjct: 2 SKTVRIATRKSKLAMWQAEHIQARLASLY--PELTIELVPMSTRGDIILDTPLAKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E ++ G D AVHS KD+P + GL++ ED RD F+S+ QSL +L Sbjct: 60 LFVKELEAAMLEGRADLAVHSMKDLPVEFPPGLELHTICESEDPRDAFVSNHYQSLNELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GT SLRR+ + + + D RG ++TRL KL+ + AI+LA +G+ RL+ Sbjct: 120 EGAVVGTCSLRRRCQVKERFPHLIINDLRGNVQTRLRKLDEGQFDAIILAASGLIRLELG 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I + +ED P+ GQG + IE ++ + + L++ + T V ERA L G Sbjct: 180 ERITSFIPVEDSLPANGQGVLGIEVRSDDDEIKALLEPLQCPTTRFRVLAERAMNRRLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I FA G L G+V DG G A +G + A+ + Sbjct: 240 GCQVPIGAFAVVDGDHLSLRGLVGDPDGVEVIREEIQGPVEQAEALGIELAEKLLARGAG 299 Query: 303 NVF 305 + Sbjct: 300 EIL 302 >gi|119484355|ref|ZP_01618972.1| Porphobilinogen deaminase [Lyngbya sp. PCC 8106] gi|119457829|gb|EAW38952.1| Porphobilinogen deaminase [Lyngbya sp. PCC 8106] Length = 321 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 106/307 (34%), Positives = 161/307 (52%), Gaps = 5/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIG+R S LAL + ++ L P + +ST+GD+I + L +IG KG Sbjct: 8 TRTVRIGSRKSQLALVQTYWVQAELKK--HFPDIEFEVHTMSTQGDKILDVALAKIGDKG 65 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLK 119 LFT+E+E +++ + D AVHS KD+PT L +GL + RE+ D + H + L+ Sbjct: 66 LFTKELEVGMLNHDTDIAVHSLKDLPTNLPEGLMLGCVTERENPADALVVHERHKDKQLE 125 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +VIGTSSLRR A L + D RG + TRL KL+ AI+LA AG+KRL Sbjct: 126 TLPQGAVIGTSSLRRLAQLRHHFPHLEFKDIRGNLNTRLEKLDEGGYDAIILAVAGLKRL 185 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I + ++ + + GQGA+ IE + E++KV+ H T + ERAFL E Sbjct: 186 GMGDRIHQTISPDVSLHAVGQGALGIECRDGDENILEILKVLEHTPTAQRCHAERAFLRE 245 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I + + + L G+V + DGK + +G +A +G D A +R Sbjct: 246 LEGGCQVPIGVNSEVENNQLTLIGMVASLDGKRLIRDTVSGETTNAEQLGIDLAHRLREQ 305 Query: 300 SNKNVFN 306 K + + Sbjct: 306 GAKEILD 312 >gi|255320960|ref|ZP_05362133.1| porphobilinogen deaminase [Acinetobacter radioresistens SK82] gi|262379948|ref|ZP_06073103.1| porphobilinogen deaminase [Acinetobacter radioresistens SH164] gi|255301924|gb|EET81168.1| porphobilinogen deaminase [Acinetobacter radioresistens SK82] gi|262298142|gb|EEY86056.1| porphobilinogen deaminase [Acinetobacter radioresistens SH164] Length = 307 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 110/301 (36%), Positives = 166/301 (55%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGLF Sbjct: 4 TLKIATRKSPLALWQAEHIRACLQELH--PGLTVELVTFVTQGDKILDTPLAKIGGKGLF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L+ G D AVHS KD+P L GL + RED D F+S+ + + L Sbjct: 62 VKELEAALLDGRADLAVHSMKDVPMHLPTGLSLPVICEREDPCDAFVSNRFEGFEQLPKG 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRRK +L+ R D++++D RG + TRL+KL+ + AI+LA AG+KRL + Sbjct: 122 ATVGTSSLRRKTQILKARPDLNILDLRGNVGTRLSKLDAGEYDAIILASAGLKRLGLSER 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 IK L+ E P+ GQGA+ +E ++ +L+ + HE T V ERAF + L+G C Sbjct: 182 IKHTLSPELSLPAVGQGALGLECRTDDQAILDLISPLQHEQTSICVRAERAFNSHLEGGC 241 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + IA +A + L G V + DG I +G A +G + A+ + + Sbjct: 242 QVPIAAYATLENGQLQLEGRVGSVDGLILLSSQVSGQPEHAEQLGIELAENLLSQGAGEL 301 Query: 305 F 305 Sbjct: 302 L 302 >gi|52424331|ref|YP_087468.1| porphobilinogen deaminase [Mannheimia succiniciproducens MBEL55E] gi|61213369|sp|Q65VX7|HEM3_MANSM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|52306383|gb|AAU36883.1| HemC protein [Mannheimia succiniciproducens MBEL55E] Length = 310 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 108/304 (35%), Positives = 162/304 (53%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K +I TR SPLAL A + L ++ P + ++ + TKGD I + L +IGGK Sbjct: 3 NKNHLKIATRQSPLALWQANYVKDRLTALY--PDLQVELVTMVTKGDVILDTPLAKIGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L++ E D AVHS KD+P + +GL +S RED RD F+S+ +SL +L Sbjct: 61 GLFVKELEHALLNHEADIAVHSMKDVPMEFPQGLGLSVICKREDPRDAFVSNKYRSLAEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +++GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+ RL Sbjct: 121 PQGAIVGTSSLRRQCQLKSLRPDLDIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRLGM 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I + + P+ GQGA+ IE V++ Q L+ + H++T V ERA L Sbjct: 181 AERIASFIETDISLPAAGQGAVGIECRVDDELVQSLLAPLAHQETTICVLAERAMNNRLQ 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I GFA K ++ +V A+DG +A +G A+ + Sbjct: 241 GGCQVPIGGFAQVKNGEVFLRALVGATDGSQIIRAEGKSAVENAEVLGVQIAEDLLQQGA 300 Query: 302 KNVF 305 + Sbjct: 301 DKIL 304 >gi|254424552|ref|ZP_05038270.1| porphobilinogen deaminase [Synechococcus sp. PCC 7335] gi|196192041|gb|EDX87005.1| porphobilinogen deaminase [Synechococcus sp. PCC 7335] Length = 319 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 107/309 (34%), Positives = 159/309 (51%), Gaps = 5/309 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RIG+R S LAL ++ L P + + T+GD+I + L++IG K Sbjct: 6 ATRTIRIGSRKSQLALVQTHWVQAELSKA--FPDITFEVSTMETQGDKILDVALSKIGDK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 GLFT+E+E ++S +D AVHS KD+PT+L +GL + RED D + H + L Sbjct: 64 GLFTQELEDDMLSHRVDFAVHSLKDLPTQLPEGLMLGCVTEREDPADALVVHEKHKDKQL 123 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L +VIGTSSLRR A L D RG + TRL KL+ + AI+LA AG+ R Sbjct: 124 DTLPEGAVIGTSSLRRLAQLRHHFPHFQFKDIRGNVNTRLRKLDEGEYDAIVLAAAGLNR 183 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L I ++L E + GQGA+ IE + ++K + H T ERAFL Sbjct: 184 LDMSDRIHQLLPAEISLHAVGQGALGIECRSGDEDILTVIKALEHLPTAQRCYAERAFLR 243 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 EL+G C+ I +G TL GIV + DG+ + + G DA ++G++ A+ +R Sbjct: 244 ELEGGCQVPIGVNTRIEGDTLTLVGIVASLDGQQLIKDTVQGAPADAESMGKELAERLRE 303 Query: 299 ISNKNVFNF 307 + + + Sbjct: 304 QGAQKILDV 312 >gi|78484457|ref|YP_390382.1| porphobilinogen deaminase [Thiomicrospira crunogena XCL-2] gi|123728099|sp|Q31JG5|HEM3_THICR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78362743|gb|ABB40708.1| hydroxymethylbilane synthase [Thiomicrospira crunogena XCL-2] Length = 309 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 114/303 (37%), Positives = 172/303 (56%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK RI TR SPLA+ A ++ L H+ + ++P+STKGD+I + L +IGGKG Sbjct: 2 KKTLRIATRKSPLAMWQAEFVKAELEKHHE--GLTVELLPMSTKGDKILDVPLAKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E ++++GE D AVHS KD+P L +G + A L R + D F+S+ ++L Sbjct: 60 LFTKELEDRMLAGEADIAVHSMKDVPMVLPEGFALGAILERHEPTDAFVSNDYAHFEELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRRKA L+ R D+ V D RG + TRL KL+ AI+LA +G+KRL+ + Sbjct: 120 QGAVLGTSSLRRKAQLMAARPDLVVKDLRGNVGTRLGKLDAGDYDAIVLATSGLKRLELD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ L+ E P+ QG + IE +P+ EL++V+NH DT ERA L+G Sbjct: 180 ERIRHELSPETCLPAVSQGTLGIEYFEKDPEVLELIQVLNHRDTEIRTLAERAMNHRLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I +A + +Y G+V A DG G++ D +G A+ + Sbjct: 240 GCQVPIGVYAELEDDQIYLRGLVGALDGSEILRSEARGSQKDPETLGVYVAEQLLEQGAG 299 Query: 303 NVF 305 + Sbjct: 300 EIL 302 >gi|113478006|ref|YP_724067.1| porphobilinogen deaminase [Trichodesmium erythraeum IMS101] gi|110169054|gb|ABG53594.1| hydroxymethylbilane synthase [Trichodesmium erythraeum IMS101] Length = 320 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 108/308 (35%), Positives = 155/308 (50%), Gaps = 5/308 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 RIG+R S LAL + + L P + +ST+GD+I + L +IG K Sbjct: 6 STPTIRIGSRKSQLALIQTYWVQEKLEK--NFPNITFEVHKMSTQGDKILDVALAKIGDK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 GLFT+E+E ++ E D AVHS KD+PT L +GL + RE+ D + H + L Sbjct: 64 GLFTKELELGMLQNETDLAVHSLKDLPTNLPEGLILGCVTERENPADALVLHEKLKDKQL 123 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 + L +VIGTSSLRR A L + D RG + TRL KL+ + A++LA+AG+ R Sbjct: 124 ETLPEGAVIGTSSLRRLAQLRYHFPHLEFKDVRGNLNTRLAKLDAGEYDALILAFAGLHR 183 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L I +I+ E + GQGA+ IE + L+K + H T ERAFL Sbjct: 184 LGMSDRIHQIIPPEISLHAVGQGALGIECRAGDNNILNLLKSLEHTATAQRCYAERAFLR 243 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 EL+G C+ I +G L G+V + DGK + G DA IG + AQ +R Sbjct: 244 ELEGGCQVPIGVNTQIEGEQLTLTGLVASLDGKKLVKDIVTGATADAEQIGIELAQKLRK 303 Query: 299 ISNKNVFN 306 + + + Sbjct: 304 QGAQEILD 311 >gi|94501432|ref|ZP_01307951.1| porphobilinogen deaminase [Oceanobacter sp. RED65] gi|94426397|gb|EAT11386.1| porphobilinogen deaminase [Oceanobacter sp. RED65] Length = 310 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 106/300 (35%), Positives = 162/300 (54%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +I TR S LAL A +S L H + ++ + T+GD+I + L +IGGKGLF Sbjct: 4 LKIATRSSKLALWQAEFVKSELEKFHS--DLQVELVKIKTQGDKILDTPLAKIGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E +++G+ D AVHS KD+P + +GL +S RE D F+S+ Q DL + Sbjct: 62 KELETAMLNGDADIAVHSMKDVPMEFPEGLGLSVICEREMPTDAFVSNHYQRFLDLPQGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+ +L R D+ V RG ++TRL KL+ + AI+LA AG+ RL+ E+ + Sbjct: 122 HVGTSSLRRQCQVLAARPDLKVSSLRGNVQTRLGKLDAGEFDAIILASAGLLRLELEERV 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E ++ E P+ GQGA+ IE +++ Q+L+ ++H DT V ERA L G C+ Sbjct: 182 AEHMSDEISLPAGGQGAVGIECRMDDEVTQKLLAPLHHSDTASRVYAERALNKRLQGGCQ 241 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IA +A L+ G+V + DG G A +G AA+ + + Sbjct: 242 VPIACYATLNDGELHLRGLVGSEDGSRIIRTEIRGPESQAEQLGIQAAEDLLAQGAGEIL 301 >gi|17229370|ref|NP_485918.1| porphobilinogen deaminase [Nostoc sp. PCC 7120] gi|17130968|dbj|BAB73577.1| porphobilinogen deaminase [Nostoc sp. PCC 7120] Length = 336 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 110/308 (35%), Positives = 167/308 (54%), Gaps = 5/308 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++ RIG+R S LAL + R L + P N + +ST+GD+I + L +IG K Sbjct: 21 ARRTIRIGSRKSQLALVQTYWVREQLQ--NSFPDINFEVHTMSTQGDKILDVALAKIGDK 78 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 GLFT+E+E +I+ EID AVHS KD+PT L +GL ++A RE+ D + H + + Sbjct: 79 GLFTKELEVGMINEEIDFAVHSLKDLPTNLPEGLALAAITERENPADALVVHENFKDKQI 138 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L +VIGTSSLRR A L ++ D RG + TRL KL+ + ++LA AG++R Sbjct: 139 DTLPAGAVIGTSSLRRLAQLRNQFPHLTFKDVRGNLNTRLAKLDAGEYDGLILAAAGLQR 198 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + +IL E + GQGA+ IE ++ + ++K I H +T D ER+FL Sbjct: 199 LGMGDRVHQILPKEISLHAVGQGALGIECRADDAELITVLKAIEHPETRDRCLAERSFLR 258 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+G C+ I G+ L G+V + DG+ + + +GN DA IG A+ +R Sbjct: 259 SLEGGCQVPIGVNTEINGNELILTGVVASVDGQNLVKDTVSGNASDAEAIGIRLAELLRE 318 Query: 299 ISNKNVFN 306 + + N Sbjct: 319 QGAQEILN 326 >gi|220910316|ref|YP_002485627.1| porphobilinogen deaminase [Cyanothece sp. PCC 7425] gi|219866927|gb|ACL47266.1| porphobilinogen deaminase [Cyanothece sp. PCC 7425] Length = 322 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 107/307 (34%), Positives = 161/307 (52%), Gaps = 5/307 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RIG+R S LAL + + L P + + +ST+GD+I + L +IG K Sbjct: 8 SSRTIRIGSRKSQLALVQTYWVQEQLQK--HFPDRSFEVHTMSTQGDKILDVALAKIGDK 65 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118 GLFT+E+E+ ++S E D AVHS KD+PT L GL + RE+ D + + L Sbjct: 66 GLFTKELEQGMLSQETDFAVHSLKDLPTHLPDGLILGCITERENPADALVMNEKYRDRPL 125 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 + L +VIGTSSLRR A L + ++ D RG + TRL KL+ + A++LA AG++R Sbjct: 126 ETLPEGAVIGTSSLRRLAQLRHYFPHLTFKDVRGNVNTRLAKLDAGEYDALVLAVAGLQR 185 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L I +IL E + GQGA+ IE ++P+ L+K + H+ T ERAFL Sbjct: 186 LGFSDRIHQILPPEISLHAVGQGALGIECRSDDPEVLSLIKALEHQPTAWRCLAERAFLR 245 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 EL+G C+ I +G L G+V + DG+ + G A +G + AQ +R Sbjct: 246 ELEGGCQVPIGVNTQLEGDQLTLTGLVASLDGQRLIKDQITGAATTAEQMGTELAQRLRQ 305 Query: 299 ISNKNVF 305 + + Sbjct: 306 QGAEEIL 312 >gi|186683929|ref|YP_001867125.1| porphobilinogen deaminase [Nostoc punctiforme PCC 73102] gi|186466381|gb|ACC82182.1| porphobilinogen deaminase [Nostoc punctiforme PCC 73102] Length = 336 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 160/305 (52%), Gaps = 5/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + + L P + +ST+GD+I + L +IG KGL Sbjct: 23 RTIRIGSRKSQLALVQTYWVQEQLQK--SFPDITFEVHTMSTQGDKILDVALAKIGDKGL 80 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKD 120 FT+E+E +++ EID AVHS KD+PT L +GL ++A RE+ D + H + + Sbjct: 81 FTKELEVGMLNQEIDFAVHSLKDLPTNLPEGLTLAAITERENPADALVVHEKHKDKQIDT 140 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSSLRR A L + D RG + TRL KL+ + A++LA AG++RL Sbjct: 141 LPEGAVIGTSSLRRLAQLRHHFPHFTFKDVRGNLITRLAKLDAGEYDALILAAAGLERLG 200 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + +I+ E + GQGA+ IE ++ + L+K I H T D ER+FL L Sbjct: 201 MSDRVHQIIPKEISLHAVGQGALGIECRADDSELLTLLKAIEHPATRDRCLAERSFLRSL 260 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I G L GIV + DG+ + + G +A +G + A+ +R Sbjct: 261 EGGCQVPIGVNTEISGENLTLTGIVASIDGQKLVKDTVTGIANNAEALGTELAELLRQQG 320 Query: 301 NKNVF 305 + + Sbjct: 321 AQEIL 325 >gi|330957337|gb|EGH57597.1| porphobilinogen deaminase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 313 Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLIVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPPGLGLFCICEREDPRDAFVSNTFDSLET 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FEDRITSSISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G + + A +G + A+ + Sbjct: 239 NGGCQVPIACYAVLEGDNVWLRGLVGDPSGSLLLHAEARAPQTAAQALGVEVAEALLAQG 298 Query: 301 NKNVF 305 ++ Sbjct: 299 AADIL 303 >gi|300866645|ref|ZP_07111332.1| porphobilinogen deaminase [Oscillatoria sp. PCC 6506] gi|300335354|emb|CBN56492.1| porphobilinogen deaminase [Oscillatoria sp. PCC 6506] Length = 323 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 107/307 (34%), Positives = 159/307 (51%), Gaps = 5/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIG+R S LAL + + L + P + +ST+GD+I + L +IG KG Sbjct: 9 TRTVRIGSRKSQLALVQTYWVQEQLQQ--RFPQCTFEVHTMSTQGDKILDVPLAKIGDKG 66 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLK 119 LFT+E+E ++S E D AVHS KD+PT L +GL + RE+ D + H + L+ Sbjct: 67 LFTKELEVGMLSNETDFAVHSLKDLPTNLPEGLILGCVSERENPADALVVHANHQDKQLE 126 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +VIGTSSLRR A L + D RG + TRL KL+ + AI+LA AG++RL Sbjct: 127 TLPPGAVIGTSSLRRLAQLRHHFPHLEFKDIRGNLNTRLAKLDEGEYDAIILAVAGLQRL 186 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + +I++ E + GQGA+ IE + EL+K + H +T ERAFL E Sbjct: 187 GMGDRVHQIISPEISLHAVGQGALGIECRAGDDDILELIKALEHTETAQRCYAERAFLRE 246 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I +G L G+V + DG+ + + G A +G D A +R Sbjct: 247 LEGGCQVPIGVNTKIEGDQLTLTGLVASLDGQRLIKDTVTGAAATAELLGIDLAHRLRQQ 306 Query: 300 SNKNVFN 306 + + Sbjct: 307 GAQEILE 313 >gi|262373963|ref|ZP_06067240.1| porphobilinogen deaminase [Acinetobacter junii SH205] gi|262310974|gb|EEY92061.1| porphobilinogen deaminase [Acinetobacter junii SH205] Length = 305 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 111/302 (36%), Positives = 168/302 (55%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L +++ P + ++ T+GD+I + L +IGGKGL Sbjct: 2 KTLKIATRQSPLALWQAEHIRARLNELY--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ +L Sbjct: 60 FVKELEAALLDGRADLAVHSMKDVPMHLPEGLTLAVICEREDPLDAFVSNQYAHFDELPH 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK +L+ R D+ +ID RG + TRL+KL++ AI+LA AG+KRL + Sbjct: 120 GAKVGTSSLRRKCQILQQRPDLEIIDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLAE 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L P+ GQGA+ +E ++ + EL+ + HE T V ERAF A L+G Sbjct: 180 RIRHCLAPTLSLPAVGQGALGLECRADDQELLELISPLQHEVTSICVRAERAFNAYLEGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IAG+A + L+ G V + DGK + +G + +G A+ + Sbjct: 240 CQVPIAGYATITQNQLHIEGRVGSVDGKTLLKEQLSGALDEGERLGVVLAEKLLAQGAGE 299 Query: 304 VF 305 + Sbjct: 300 LL 301 >gi|110835183|ref|YP_694042.1| porphobilinogen deaminase [Alcanivorax borkumensis SK2] gi|123345297|sp|Q0VM28|HEM3_ALCBS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|110648294|emb|CAL17770.1| porphobilinogen deaminase [Alcanivorax borkumensis SK2] Length = 310 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ RI TR SPLA+ A + L +H+ + ++ + T+GD+I + L +IGG Sbjct: 1 MSREILRIATRSSPLAIWQAEYVQQRLESLHE--GLRVELVRIKTQGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P +L G + RED RD F+S+T L Sbjct: 59 KGLFVKELEEAMMDGRADIAVHSMKDVPMELPPGFALPVICEREDPRDAFVSNTFDGLSS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+A + R D+ V RG ++TRL KL+ AI+LA AG+KRL+ Sbjct: 119 LPHGACVGTSSLRRQAQVKANRPDLVVNSLRGNVQTRLGKLDAGNFDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ + E+ P+ GQGA+ IE + EL+ ++ DTWD V ERA L Sbjct: 179 MHDRIRYEMPPEESLPAVGQGAVGIECREGDESTIELLSPLSDVDTWDRVVAERAMNRRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IAGFA + L+ G+V DG R +G D A+ + Sbjct: 239 EGGCQVPIAGFALLEDGQLWLRGLVAEEDGSRVLRAEGTAPRGQGAELGIDIAEQLLAQG 298 Query: 301 NKNVF 305 + Sbjct: 299 ADEIL 303 >gi|71738146|ref|YP_272379.1| porphobilinogen deaminase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558699|gb|AAZ37910.1| porphobilinogen deaminase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 328 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 16 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL + Sbjct: 74 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 133 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 134 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 193 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 194 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 253 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G + + A +G A+ + Sbjct: 254 NGGCQVPIACYAVLEGDDVWLRGLVGDPAGSVLLHAEARAPQTSAQALGVQVAEALLAQG 313 Query: 301 NKNVF 305 ++ Sbjct: 314 AADIL 318 >gi|61213332|sp|Q602K3|HEM3_METCA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 322 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 112/304 (36%), Positives = 163/304 (53%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 RI TR SPLAL A S L H P + ++ ++T+GD++ + L ++GGK Sbjct: 14 ASHTLRIATRKSPLALWQAEYVASRLRAAH--PDLRVELVGMTTRGDKLLDAPLAKVGGK 71 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E+ L+ G D AVHS KD+P + +GL ++A L RED RD +SH +S +L Sbjct: 72 GLFVKELEQGLLEGRADIAVHSMKDVPVEFPEGLHLAAILEREDPRDALVSHRYRSFAEL 131 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSSLRR+ + S+ D RG + TRL KL+ + AI+LA AG+KRL Sbjct: 132 PADARIGTSSLRRQCQIKCRLPGCSLYDLRGNVNTRLAKLDAGEFDAIVLASAGLKRLGF 191 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 ++ I E L E P+ GQGAI +E + + L+ ++H T V ERA LD Sbjct: 192 QERIAETLTPEQCLPAIGQGAIGVECRSTDTRTNALLVPLHHPPTAWCVLAERAMNRRLD 251 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ IAGFA +G TL G+V DG G+ +G+ A+++ Sbjct: 252 GGCQVPIAGFAQLEGDTLSLRGLVGNPDGSGIIRAEAVGHPSTFEALGKRVAEHLLDQGA 311 Query: 302 KNVF 305 + Sbjct: 312 DEIL 315 >gi|75910970|ref|YP_325266.1| porphobilinogen deaminase [Anabaena variabilis ATCC 29413] gi|75704695|gb|ABA24371.1| hydroxymethylbilane synthase [Anabaena variabilis ATCC 29413] Length = 336 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 110/308 (35%), Positives = 165/308 (53%), Gaps = 5/308 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++ RIG+R S LAL + R L + P N + +ST+GD+I + L +IG K Sbjct: 21 ARRTIRIGSRKSQLALVQTYWVREQLQ--NSFPDINFEVHTMSTQGDKILDVALAKIGDK 78 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 GLFT+E+E +I+ EID AVHS KD+PT L +GL ++A RE+ D + H + + Sbjct: 79 GLFTKELEVGMINEEIDFAVHSLKDLPTNLPEGLALAAITERENPADALVVHENFKDKQI 138 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L +VIGTSSLRR A L ++ D RG + TRL KL+ + ++LA AG++R Sbjct: 139 DTLPAGAVIGTSSLRRLAQLRNQFPHLTFKDVRGNLNTRLAKLDAGEYDGLILAAAGLQR 198 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L I ++L E + GQGA+ IE N+ + ++K I H T D ER+FL Sbjct: 199 LGMGDRIHQVLPKEVSLHAVGQGALGIECRANDAELITILKAIEHPQTRDRCLAERSFLR 258 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+G C+ I G L G+V + DG+ + + +G+ DA IG A+ +R Sbjct: 259 SLEGGCQVPIGVNTEINGDELILTGVVASVDGQNLVKDTVSGDASDAEAIGIRLAELLRE 318 Query: 299 ISNKNVFN 306 + + N Sbjct: 319 QGAQEILN 326 >gi|119511003|ref|ZP_01630124.1| porphobilinogen deaminase [Nodularia spumigena CCY9414] gi|119464348|gb|EAW45264.1| porphobilinogen deaminase [Nodularia spumigena CCY9414] Length = 323 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 108/307 (35%), Positives = 160/307 (52%), Gaps = 5/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIG+R S LAL + R L P + + +ST+GD I + L +IG KG Sbjct: 9 TRTIRIGSRKSQLALVQTYWVRDQLQK--SFPDISFEVHTMSTQGDNILDVALAKIGDKG 66 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 LFT+E+E +++ EID AVHS KD+PT L GL ++ RE+ D + H + ++ Sbjct: 67 LFTKELEVGMLNQEIDFAVHSLKDLPTNLPSGLTLAVITERENPADALVVHDKYKDKQIE 126 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +VIGTSSLRR A L + D RG + TRL KL++ + A++LA AG++RL Sbjct: 127 TLPAGAVIGTSSLRRLAQLRNKFPHFTFKDVRGNLNTRLKKLDSGEYDALILAAAGLERL 186 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I +IL E + GQGA+ IE ++ + ++K I H +T D ERAFL Sbjct: 187 GMSDRIHQILPKEISLHAVGQGALGIECRADDKEIINILKAIEHSETRDRCLAERAFLRI 246 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I G L GIV + DG+ + + G DA +G + A +R Sbjct: 247 LEGGCQVPIGVNTVIDGDNLTLTGIVASVDGQKLVKDTVTGAAKDAEKLGAELAALLREQ 306 Query: 300 SNKNVFN 306 + + Sbjct: 307 GAQEILE 313 >gi|301155139|emb|CBW14603.1| hydroxymethylbilane synthase [Haemophilus parainfluenzae T3T1] Length = 310 Score = 392 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 106/302 (35%), Positives = 164/302 (54%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A + L H P ++ ++P+ TKGD I + L +IGGKGL Sbjct: 5 KTLKIATRQSPLALWQANFVKDQLEKFH--PTLSVELVPMVTKGDVILDSPLAKIGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ D AVHS KD+P + +GL +S RED RD F+S+T +SL +L Sbjct: 63 FVKELENALLEKRADIAVHSMKDVPMEFPEGLGLSVICKREDPRDAFVSNTYRSLDELPQ 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+ L + R D+ + RG + TRL+KL+N++ AI+LA AG+ RL + Sbjct: 123 GAIVGTSSLRRQCQLKQLRPDLDIRSLRGNVGTRLSKLDNSEYDAIILASAGLIRLGLAE 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + +E P+ GQGA+ IE V++ + + L+ ++ T V ERA L G Sbjct: 183 RIASFIEVEQSLPAAGQGAVGIECRVDDEEVKALLAPLSDATTTTCVLAERAMNTRLQGG 242 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I G+A + ++ +V +DG +A +G A+ + Sbjct: 243 CQVPIGGYAIEQNGEIFLRALVGEADGSAIIRAEGKSAVENAEALGVTIAEQLLAQGADK 302 Query: 304 VF 305 + Sbjct: 303 IL 304 >gi|24211755|sp|Q8YVU6|HEM3_ANASP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 323 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 110/308 (35%), Positives = 167/308 (54%), Gaps = 5/308 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++ RIG+R S LAL + R L + P N + +ST+GD+I + L +IG K Sbjct: 8 ARRTIRIGSRKSQLALVQTYWVREQLQ--NSFPDINFEVHTMSTQGDKILDVALAKIGDK 65 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 GLFT+E+E +I+ EID AVHS KD+PT L +GL ++A RE+ D + H + + Sbjct: 66 GLFTKELEVGMINEEIDFAVHSLKDLPTNLPEGLALAAITERENPADALVVHENFKDKQI 125 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L +VIGTSSLRR A L ++ D RG + TRL KL+ + ++LA AG++R Sbjct: 126 DTLPAGAVIGTSSLRRLAQLRNQFPHLTFKDVRGNLNTRLAKLDAGEYDGLILAAAGLQR 185 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + +IL E + GQGA+ IE ++ + ++K I H +T D ER+FL Sbjct: 186 LGMGDRVHQILPKEISLHAVGQGALGIECRADDAELITVLKAIEHPETRDRCLAERSFLR 245 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+G C+ I G+ L G+V + DG+ + + +GN DA IG A+ +R Sbjct: 246 SLEGGCQVPIGVNTEINGNELILTGVVASVDGQNLVKDTVSGNASDAEAIGIRLAELLRE 305 Query: 299 ISNKNVFN 306 + + N Sbjct: 306 QGAQEILN 313 >gi|294649011|ref|ZP_06726459.1| hydroxymethylbilane synthase [Acinetobacter haemolyticus ATCC 19194] gi|292825146|gb|EFF83901.1| hydroxymethylbilane synthase [Acinetobacter haemolyticus ATCC 19194] Length = 305 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 113/302 (37%), Positives = 164/302 (54%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A RS L ++ P + ++ T+GD+I + L +IGGKGL Sbjct: 2 KTLKIATRQSPLALWQAEHIRSRLNALY--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L GL ++ RED D F+S+ +DL Sbjct: 60 FVKELEAALLDGRADLAVHSMKDVPMHLPDGLTLAVICEREDPLDAFVSNQYARFEDLPQ 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK +L+ R D+ ++D RG + TRL+KL++ AI+LA AG+KRL Sbjct: 120 GAKVGTSSLRRKCQILQQRPDLEIVDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLAD 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L P+ GQGA+ +E ++ K L++ + HE+T V ERA A L+G Sbjct: 180 RIRHCLAPVLSLPAVGQGALGLECRADDEKLLALIQPLQHEETSICVRAERALNAYLEGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IAG+A L G V + DGK + G+ A +G AQ + Sbjct: 240 CQVPIAGYATIVNHQLQIEGRVGSVDGKTLLKKQLIGSTDQAEQLGEQLAQDLLDQGAGE 299 Query: 304 VF 305 + Sbjct: 300 LL 301 >gi|218437216|ref|YP_002375545.1| porphobilinogen deaminase [Cyanothece sp. PCC 7424] gi|218169944|gb|ACK68677.1| porphobilinogen deaminase [Cyanothece sp. PCC 7424] Length = 320 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 162/306 (52%), Gaps = 5/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIG+R S LAL + + L H P + +ST+GD+I + L +IG KG Sbjct: 7 TRTVRIGSRKSQLALVQTYWVQEQLQKHH--PDRQFEVETMSTQGDKILDVALAKIGDKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSLK 119 LFT+E+E ++ G+ D AVHS KD+PTKL GL + R D D + H + ++ Sbjct: 65 LFTKELEVSMLEGQTDLAVHSLKDLPTKLPDGLMLGCITERVDPADGLVVNEKHKDKQIE 124 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +VIGTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG+ RL Sbjct: 125 TLPEGAVIGTSSLRRLAQLRYHFPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLTRL 184 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I +++ + + GQGA+ IE +P+ EL+KV+ H+ T D ER+FL E Sbjct: 185 GMSDRIHQVIPSDISLHAVGQGALGIECRTEDPEILELLKVLEHQPTRDRCYAERSFLRE 244 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I G TL G+V + DGK + + G DA +G+D A +R Sbjct: 245 LEGGCQVPIGVNTSVDGDTLTLTGMVASLDGKKLIKDTITGKTTDAEQLGKDLAIRVRNA 304 Query: 300 SNKNVF 305 + Sbjct: 305 GAGEIL 310 >gi|146280919|ref|YP_001171072.1| porphobilinogen deaminase [Pseudomonas stutzeri A1501] gi|145569124|gb|ABP78230.1| porphobilinogen deaminase [Pseudomonas stutzeri A1501] Length = 314 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 107/303 (35%), Positives = 163/303 (53%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGGKG Sbjct: 4 SREIRIATRKSALALWQAEYVKARLEASH--PGLKVSLVPMVSRGDKLLDAPLAKIGGKG 61 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ E D AVHS KD+P + +GL + RED RD F+S+ SL L Sbjct: 62 LFVKELETALLENEADIAVHSMKDVPMEFPEGLGLYCICEREDPRDAFVSNRFDSLDALP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 122 PGSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFG 181 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ + +++ P+ GQGA+ IE + + L+ +NH T V ERA L+G Sbjct: 182 ERIRSSIGVDESLPAGGQGAVGIECRTGDSEVHALLACLNHAPTATRVVAERALNKRLNG 241 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IA +A +G L+ G+V DG + +A +G A+ + + Sbjct: 242 GCQVPIACYAVLEGEQLWLRGLVGQPDGTLLLRAEGRAPAAEAEALGVQVAEELLDQGAE 301 Query: 303 NVF 305 + Sbjct: 302 QIL 304 >gi|83643194|ref|YP_431629.1| porphobilinogen deaminase [Hahella chejuensis KCTC 2396] gi|123753698|sp|Q2SQ70|HEM3_HAHCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|83631237|gb|ABC27204.1| porphobilinogen deaminase [Hahella chejuensis KCTC 2396] Length = 311 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 162/306 (52%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K+ I TR S LAL A + L +H P + ++ L+TKGD I + L ++GG Sbjct: 1 MPKQHLVIATRQSALALWQAEHVKQRLEALH--PGLTVELLGLTTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + GL + A L RE D F+S+ SL + Sbjct: 59 KGLFVKELETAMLEGRADIAVHSMKDVPMEFPPGLGLGAILERETPMDAFVSNQYASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ ++ RG + TRL KL+ AI+LA +G+KRL Sbjct: 119 LPEGAVVGTSSLRRQCQLSERRPDLKILSLRGNVNTRLAKLDAGDFDAIILAASGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+E L E P+ GQGA+ IE +++P+A L+ + +T V+ ERA L Sbjct: 179 FSGRIREELTPEVSLPAVGQGALGIECRLDDPEAMALIAQLQDAETTARVSAERAMNHRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A G + G+V + DG G A +G + A+ + Sbjct: 239 QGGCQVPIAGYAEITGDQMRLRGLVGSPDGAQVLRDEVEGPVAAAEALGTELAERLLQQG 298 Query: 301 NKNVFN 306 + Sbjct: 299 AGKILE 304 >gi|330812535|ref|YP_004356997.1| porphobilinogen deaminase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380643|gb|AEA71993.1| porphobilinogen deaminase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 313 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MCPREIRIATRKSALALWQAEYVKARLEAAH--PGLIVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTFSSLEA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + L+ ++HEDT V ERA L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSADSDIHALLAPLHHEDTATRVFAERALNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V +G R DA +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGEQVWLRGLVGDPNGGRLLSAEARAPRHDAEALGVRVAEDLLSQG 298 Query: 301 NKNVF 305 ++ Sbjct: 299 AADIL 303 >gi|326796191|ref|YP_004314011.1| porphobilinogen deaminase [Marinomonas mediterranea MMB-1] gi|326546955|gb|ADZ92175.1| Porphobilinogen deaminase [Marinomonas mediterranea MMB-1] Length = 308 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 170/306 (55%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ K I TR S LAL A + L ++ P + ++ ++TKGD+I + L++IGG Sbjct: 1 MKDK-IVIATRESKLALWQANTVKKQLETLY--PNLTVELLGMTTKGDQILDSPLSKIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P KGL ++ RED D F+S+ SL + Sbjct: 58 KGLFVKELESALLDGRADIAVHSMKDVPMAFPKGLGLAVICEREDPSDAFVSNKYSSLDE 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR + + R D+ + RG + TRL KL+NN+ AI+LA AG+ RL+ Sbjct: 118 LPKGSVLGTSSLRRACQIQQHRPDLKIESLRGNVGTRLGKLDNNEYDAIILATAGLIRLE 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E IK L+ P+ GQGA+ IE N+ EL+ + H+DT+ V ERA L Sbjct: 178 LEDRIKSRLSDTYCLPAGGQGAMGIECRDNDKDILELLAPLQHQDTYYRVTAERAVNKRL 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C++ IA FA ++ G+V ++DG+ G +A +G A+ + Sbjct: 238 NGGCQAPIACFATLSDGEIWLRGLVGSTDGQQMITGDIKGAPQNAEQLGITLAEDLLNRG 297 Query: 301 NKNVFN 306 + + + Sbjct: 298 AQRILD 303 >gi|225850000|ref|YP_002730234.1| porphobilinogen deaminase [Persephonella marina EX-H1] gi|225645034|gb|ACO03220.1| porphobilinogen deaminase [Persephonella marina EX-H1] Length = 308 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 115/301 (38%), Positives = 169/301 (56%), Gaps = 2/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A L P + ++ + TKGD+I + L ++GGKGLF Sbjct: 3 IRIGTRKSKLALWQANYIADQLKK--HFPDLEVELVKIVTKGDKILDVPLAKVGGKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ ++ EID AVHS KD+PT +GL + A RED RD F+S S++D+ + Sbjct: 61 KEIEEAMLRNEIDIAVHSLKDVPTYFPEGLGLVAITEREDPRDAFLSVKYNSIEDMPEGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRRKA ++ R DI + D RG ++TR+ KL + I+LAYAG+KRL E + Sbjct: 121 VLGTSSLRRKAQIMMKRKDIRIEDLRGNVDTRIRKLEEGQYDGIILAYAGLKRLGLEGKV 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++IL + P+ QG + IE +++ K +E+V V+NH ++ ERAFL L+G C+ Sbjct: 181 RQILQPDYMIPAVAQGFLGIEARLDDEKTREIVSVLNHRESEIRAKAERAFLKTLEGGCQ 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +AG++ L G V G S G+ DA ++G A+ + K V Sbjct: 241 VPLAGYSEIVNGKLKITGFVSDLTGDRVFRDSMEGSLEDAESLGVKLAEKLLSDGAKEVL 300 Query: 306 N 306 Sbjct: 301 E 301 >gi|311693131|gb|ADP96004.1| porphobilinogen deaminase [marine bacterium HP15] Length = 313 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 109/306 (35%), Positives = 171/306 (55%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K+ RI TR S LAL A ++ L +H + ++ + T+GD+I + L +IGG Sbjct: 1 MSKRTLRIATRSSALALWQAEFIKAELERLHD--NITVELVKIKTQGDKILDVPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P + +GL + A RED D F+S+ ++ Sbjct: 59 KGLFVKELEEAMLDGRADLAVHSMKDVPMEFPEGLGLVAICEREDPTDAFVSNHYDNVDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT+SLRR+A L +R D+ + RG + TRL KL+ + AI+LA +G+KRL Sbjct: 119 LPHGAVVGTASLRREAQLRAYRPDLEIRVLRGNVNTRLAKLDAGEYEAIVLASSGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L P+ GQGA+ IE V++ +++ + H+DTWD V ERA L Sbjct: 179 FHERIRYCLPDTLSLPAVGQGALGIECRVDDQDLLAMLEPLKHKDTWDRVTAERALNRRL 238 Query: 241 DGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ IA +A + T++ G+V A DG V R + +GR+ A+ + + Sbjct: 239 EGGCQVPIAAYALLEDDDTIWLRGLVGAVDGTQIFRVEGRAPRAEGERLGRELAEDLLAL 298 Query: 300 SNKNVF 305 V Sbjct: 299 GADKVL 304 >gi|152997593|ref|YP_001342428.1| porphobilinogen deaminase [Marinomonas sp. MWYL1] gi|150838517|gb|ABR72493.1| porphobilinogen deaminase [Marinomonas sp. MWYL1] Length = 326 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 110/304 (36%), Positives = 169/304 (55%), Gaps = 2/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR S LAL A ++ L ++ P + ++ ++TKGD+I + L++IGGKG Sbjct: 19 KDKIVIATRESQLALWQANNIKAQLESLY--PDMKVELLGMTTKGDQILDSPLSKIGGKG 76 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L G D AVHS KD+P +GL ++ RED D F+S+ +SL L Sbjct: 77 LFVKELENALTEGLADIAVHSMKDVPMAFPEGLGLAVICEREDPHDAFVSNKVESLDQLP 136 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR L R D+ + D RG + TRL K+++ + AI+LA AG+ RL+ Sbjct: 137 SGAIVGTSSLRRSCQLRMKRPDLIIKDLRGNVNTRLKKMDDGEYDAIILATAGLVRLEML 196 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I++ + E P+ GQGA+ IE ++ + L+ + HE+T V ERA L+G Sbjct: 197 DRIRQRIPAETSLPAGGQGAMGIECRSDDIQTINLLAPLQHEETAIRVTAERAVNERLNG 256 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C++ IA FA + TL+ G+V + DGK E G++ DA ++G A + Sbjct: 257 GCQAPIACFAILENDTLWLRGLVGSPDGKTMIEGEIRGHKDDAKSLGVQLADDLLARGAD 316 Query: 303 NVFN 306 + N Sbjct: 317 IILN 320 >gi|153875202|ref|ZP_02003104.1| porphobilinogen deaminase [Beggiatoa sp. PS] gi|152068334|gb|EDN66896.1| porphobilinogen deaminase [Beggiatoa sp. PS] Length = 309 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 112/304 (36%), Positives = 166/304 (54%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K RI TR SPLAL R L H P I ++ ++T+GD+I + L +IGGK Sbjct: 3 NKNIIRIATRKSPLALWQTHHVRDILCHAH--PQLQIELVEMTTQGDKILDVPLAKIGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L G++D AVHS KD+P + GL + + RE+ D F+S+ L Sbjct: 61 GLFVKELENGLFEGKVDIAVHSMKDVPVEFPPGLILPVIMEREEPYDAFVSNHYSGFTAL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +++GTSSLRR+ LL R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 121 PQGAIVGTSSLRRQCQLLVLRPDLQIRTLRGNVGTRLKKLDNGDYDAIILAAAGLKRLGM 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I+E+L E P+ GQGAI IE ++ + Q+L+ V+NH+ T + + ERA +L+ Sbjct: 181 AERIREVLKPEVMLPAIGQGAIGIECRADDTETQQLIAVLNHKPTQERLKAERALNEQLN 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ IAG+A + + G+V DGK G A +G++ A + Sbjct: 241 GGCQVPIAGYAEIEAEMMTVRGLVGDIDGKEVLHHKVQGPIESAETLGKELATELLAQGA 300 Query: 302 KNVF 305 + Sbjct: 301 DRLL 304 >gi|262375167|ref|ZP_06068401.1| porphobilinogen deaminase [Acinetobacter lwoffii SH145] gi|262310180|gb|EEY91309.1| porphobilinogen deaminase [Acinetobacter lwoffii SH145] Length = 310 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 115/302 (38%), Positives = 170/302 (56%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L D+H + ++ T+GD+I + L +IGGKGL Sbjct: 5 KTLKIATRQSPLALWQAEHIRARLQDLHA--GLQVELVTFVTQGDKILDTPLAKIGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+T S ++L Sbjct: 63 FVKELEAALLDGRADLAVHSMKDVPMALPEGLSLAVICEREDPLDAFVSNTYTSFEELPQ 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK +L+ R D+ +ID RG + TRL+KL+ + AI+LA AG+KRL + Sbjct: 123 GAKVGTSSLRRKTQILKQRPDLDIIDLRGNVGTRLSKLDAGQYDAIILASAGLKRLGLAE 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L E P+ GQGA+ +E ++ +L++ + H DT V ERAF A L+G Sbjct: 183 RIRHTLTPEVSLPAVGQGALGLECRTHDQTVLDLIQPLLHADTDACVRAERAFNAYLEGG 242 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IAG+A K + G V + DG + + G DA +G A+ + Sbjct: 243 CQVPIAGYATLKEGVISIEGRVGSIDGAVLLRAQQTGKTADAEQLGVKLAKDLLDQGAGE 302 Query: 304 VF 305 + Sbjct: 303 LL 304 >gi|327479188|gb|AEA82498.1| porphobilinogen deaminase [Pseudomonas stutzeri DSM 4166] Length = 312 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 107/303 (35%), Positives = 163/303 (53%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGGKG Sbjct: 2 SREIRIATRKSALALWQAEYVKARLEASH--PGLKVSLVPMVSRGDKLLDAPLAKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ E D AVHS KD+P + +GL + RED RD F+S+ SL L Sbjct: 60 LFVKELETALLENEADIAVHSMKDVPMEFPEGLGLYCICEREDPRDAFVSNRFDSLDALP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 120 PGSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFG 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ + +++ P+ GQGA+ IE + + L+ +NH T V ERA L+G Sbjct: 180 ERIRSSIGVDESLPAGGQGAVGIECRTGDSEVHALLACLNHAPTATRVVAERALNKRLNG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IA +A +G L+ G+V DG + +A +G A+ + + Sbjct: 240 GCQVPIACYAVLEGEQLWLRGLVGQPDGTLLLRAEGRAPAAEAEALGVQVAEELLDQGAE 299 Query: 303 NVF 305 + Sbjct: 300 QIL 302 >gi|254427203|ref|ZP_05040910.1| porphobilinogen deaminase [Alcanivorax sp. DG881] gi|196193372|gb|EDX88331.1| porphobilinogen deaminase [Alcanivorax sp. DG881] Length = 310 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 168/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ RI TR SPLA+ A + L +H+ + ++ + T+GD+I + L +IGG Sbjct: 1 MSREILRIATRSSPLAIWQAEYVQQRLESLHE--GLAVELVRIKTQGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P +L +G + RED RD F+S+T SL Sbjct: 59 KGLFVKELEEAMMDGRADIAVHSMKDVPMELPEGFALPVICEREDPRDAFVSNTFDSLSS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+A + R D+ V RG ++TRL KL+ + AI+LA AG+KRL+ Sbjct: 119 LPHGACVGTSSLRRQAQVKANRPDLVVKSLRGNVQTRLGKLDAGEFDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ + E+ P+ GQGA+ IE + + +L+ ++ DTWD V ERA L Sbjct: 179 MHDRIRYEMPPEESLPAVGQGAVGIECREADTRTIDLLSPLSDVDTWDRVVAERAMNRRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DG C+ IAGFA + L+ G+V DG + R +G D A+ + Sbjct: 239 DGGCQVPIAGFALLEDGQLWLRGLVAEEDGSRVLRAEGSAPRAKGAELGIDIAEQLLAQG 298 Query: 301 NKNVF 305 + Sbjct: 299 ADAIL 303 >gi|104784255|ref|YP_610753.1| porphobilinogen deaminase [Pseudomonas entomophila L48] gi|123380753|sp|Q1I316|HEM3_PSEE4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|95113242|emb|CAK17970.1| porphobilinogen deaminase [Pseudomonas entomophila L48] Length = 313 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAH--PGLQVSLVPMVSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T +SL+ Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFKSLEA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLVRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADSEIHALLAPLHHIDTADRVVAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V G R A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRASAEALGVQVAEDLLSQG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AEAIL 303 >gi|15889908|ref|NP_355589.1| porphobilinogen deaminase [Agrobacterium tumefaciens str. C58] gi|23821691|sp|Q8UC46|HEM3_AGRT5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|15157859|gb|AAK88374.1| porphobilinogen deaminase [Agrobacterium tumefaciens str. C58] Length = 309 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 167/306 (54%), Positives = 225/306 (73%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A+ETRS LM H +P I+ LSTKGDRIT+R L+EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAYETRSRLMAAHGLPEEMFEIVVLSTKGDRITDRALSEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E +L+SGE+D AVHS+KDMPT L +GL +SA+LPRED+RD FI TA L + Sbjct: 61 KGLFTEELENQLLSGELDIAVHSSKDMPTVLPEGLHLSAFLPREDMRDAFIGRTAPKLLE 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+G++SLRR+AL+ R R D++VI FRG ++TRL KL +A A LLA+AG+KRL Sbjct: 121 LPQGAVVGSASLRRQALIRRLRPDLNVIVFRGLVDTRLRKLEEGQADATLLAFAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K+ V EIL+ ++FPP+P QGAI +E+ + + + +L+ IN T+D+V CERAFLA L Sbjct: 181 KDNVPTEILDPKEFPPAPAQGAIGVESRIGDARMDKLLAPINDRPTYDAVTCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG+A C+G L+F G++L DG+ H V +GNR DA+ +G+ A + +R + Sbjct: 241 DGSCRTPIAGYATCEGDNLHFSGLILTPDGQTSHGVEISGNRRDALILGKKAGEEVRAKA 300 Query: 301 NKNVFN 306 N F Sbjct: 301 GSNFFE 306 >gi|226951768|ref|ZP_03822232.1| porphobilinogen deaminase [Acinetobacter sp. ATCC 27244] gi|226837483|gb|EEH69866.1| porphobilinogen deaminase [Acinetobacter sp. ATCC 27244] Length = 305 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 114/302 (37%), Positives = 164/302 (54%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A RS L ++ P + ++ T+GD+I + L +IGGKGL Sbjct: 2 KTLKIATRQSPLALWQAEHIRSRLNTLY--PDLTVELVKFVTQGDKILDTPLAKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L GL ++ RED D F+S+ +DL Sbjct: 60 FVKELEAALLDGRADLAVHSMKDVPMHLPDGLTLAVICEREDPLDAFVSNQYARFEDLPQ 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK +L+ R D+ +ID RG + TRL+KL++ AI+LA AG+KRL Sbjct: 120 GAKVGTSSLRRKCQILQQRPDLEIIDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLAD 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L P+ GQGA+ +E ++ K L++ + HE+T V ERA A L+G Sbjct: 180 RIRHCLAPVLSLPAVGQGALGLECRADDEKLLALIQPLQHEETSICVRAERALNAYLEGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IAG+A L G V + DGK + G+ A +G AQ + Sbjct: 240 CQVPIAGYATIVNHQLQIEGRVGSVDGKTLLKKQLIGSTDQAEQLGEQLAQDLLDQGAGE 299 Query: 304 VF 305 + Sbjct: 300 LL 301 >gi|313110333|ref|ZP_07796223.1| porphobilinogen deaminase [Pseudomonas aeruginosa 39016] gi|310882725|gb|EFQ41319.1| porphobilinogen deaminase [Pseudomonas aeruginosa 39016] Length = 313 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ +N++D P+ GQGA+ IE + L++ ++H DT V ERA L Sbjct: 179 FESRIRSSINVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V DG +A +G A+ + Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLAEAEALGVRVAEDLLEQG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 AEAILE 304 >gi|254238043|ref|ZP_04931366.1| porphobilinogen deaminase [Pseudomonas aeruginosa C3719] gi|126169974|gb|EAZ55485.1| porphobilinogen deaminase [Pseudomonas aeruginosa C3719] Length = 313 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V DG +A +G A+ + Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLAEAEALGVRVAEDLLEQG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 AEAILE 304 >gi|254490211|ref|ZP_05103401.1| porphobilinogen deaminase [Methylophaga thiooxidans DMS010] gi|224464558|gb|EEF80817.1| porphobilinogen deaminase [Methylophaga thiooxydans DMS010] Length = 309 Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K+ RI TR SPLA+ A + SL+ +H P + ++ + T+GD I + L ++GG Sbjct: 1 MSKRTVRIATRNSPLAVWQAEFVKDSLLALH--PDLTVELVKMKTQGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P + +GL + RED D F+S+ Q++ D Sbjct: 59 KGLFVKELEQGMLDGRADIAVHSMKDVPVEFPEGLHLPVICKREDPHDAFVSNHYQTIDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+ R D+ V+ RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPHGARLGTSSLRRECQARTHRPDLEVLPLRGNVNTRLRKLDEGQFDAIILAMAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L E P+ GQGA+ IET +++ + L+ ++ T + ERA L Sbjct: 179 FDDRIRSALTPEQSLPAIGQGALGIETRIDDDEMNALIAPLHCPQTAIVLTAERALNRRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A +G ++ G+V DG G DA +G A+ + Sbjct: 239 SGGCQVPIAGYAMLEGDEVWLRGLVGRPDGTNTLYADVRGAAKDADKLGVQIAETLLTKG 298 Query: 301 NKNVF 305 + Sbjct: 299 ADKIL 303 >gi|15600453|ref|NP_253947.1| porphobilinogen deaminase [Pseudomonas aeruginosa PAO1] gi|107104362|ref|ZP_01368280.1| hypothetical protein PaerPA_01005437 [Pseudomonas aeruginosa PACS2] gi|218894362|ref|YP_002443232.1| porphobilinogen deaminase [Pseudomonas aeruginosa LESB58] gi|254243856|ref|ZP_04937178.1| porphobilinogen deaminase [Pseudomonas aeruginosa 2192] gi|12230932|sp|Q60169|HEM3_PSEAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226740638|sp|B7V5F0|HEM3_PSEA8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|9951571|gb|AAG08645.1|AE004938_7 porphobilinogen deaminase [Pseudomonas aeruginosa PAO1] gi|126197234|gb|EAZ61297.1| porphobilinogen deaminase [Pseudomonas aeruginosa 2192] gi|218774591|emb|CAW30408.1| porphobilinogen deaminase [Pseudomonas aeruginosa LESB58] Length = 313 Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V DG +A +G A+ + Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLAEAEALGVRVAEDLLEQG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 AEAILE 304 >gi|116053408|ref|YP_793733.1| porphobilinogen deaminase [Pseudomonas aeruginosa UCBPP-PA14] gi|122256573|sp|Q02EA3|HEM3_PSEAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|115588629|gb|ABJ14644.1| porphobilinogen deaminase [Pseudomonas aeruginosa UCBPP-PA14] Length = 313 Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHSDTALRVTAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V DG +A +G A+ + Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLAEAEALGVRVAEDLLEQG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 AEAILE 304 >gi|49085204|gb|AAT51260.1| PA5260 [synthetic construct] Length = 314 Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V DG +A +G A+ + Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLAEAEALGVRVAEDLLEQG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 AEAILE 304 >gi|325294021|ref|YP_004279885.1| Porphobilinogen deaminase [Agrobacterium sp. H13-3] gi|325061874|gb|ADY65565.1| Porphobilinogen deaminase [Agrobacterium sp. H13-3] Length = 309 Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats. Identities = 172/306 (56%), Positives = 225/306 (73%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A+ETR+ LM H +P I+ LSTKGDRIT+R L+EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAYETRNRLMSAHGLPEDMFEIVVLSTKGDRITDRALSEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E +L+SGE+D AVHS+KDMPT L KGL +SA+LPRED+RD FI TA L + Sbjct: 61 KGLFTEELESQLLSGELDIAVHSSKDMPTVLPKGLYLSAFLPREDMRDAFIGRTAPKLLE 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+G++SLRR+AL+ R R D+SVI FRG++ETRL KL +A A LLA+AG+KRL Sbjct: 121 LPQGAVVGSASLRRQALIRRLRPDLSVIIFRGQVETRLRKLEEGQADATLLAFAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E V +IL+ +DFPP+P QGAIC+E+ + + + EL+ IN T+D+V CERAFLA L Sbjct: 181 MENVPTDILDPKDFPPAPAQGAICVESRIGDTRMDELLSPINDIPTYDAVTCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAGFA C G L+F G++L DG+ H V +G R DA ++GR A + +R + Sbjct: 241 DGSCRTPIAGFATCHGEELHFSGLILTPDGQTSHSVEISGARKDAEDLGRKAGEDVRARA 300 Query: 301 NKNVFN 306 N F+ Sbjct: 301 GSNFFD 306 >gi|254414246|ref|ZP_05028013.1| porphobilinogen deaminase [Microcoleus chthonoplastes PCC 7420] gi|196178921|gb|EDX73918.1| porphobilinogen deaminase [Microcoleus chthonoplastes PCC 7420] Length = 321 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 108/306 (35%), Positives = 162/306 (52%), Gaps = 5/306 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + + L P + + +ST GD+I + L++IG KGL Sbjct: 10 RTIRIGSRKSQLALVQTYWVQEQL--HKHYPDRDFEVQTMSTHGDKILDVALSKIGDKGL 67 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120 FT+E+E +++ EID AVHS KD+PT L +GL + RE+ D + H + L Sbjct: 68 FTKELEVGMLNQEIDLAVHSLKDLPTALPEGLVLGCVTERENPADALVLHAKHQGKQLDT 127 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSSLRR A L + D RG + TRL KL+ + A++LA AG+KRL Sbjct: 128 LPEGAVIGTSSLRRLAQLRYHFPHFTFKDIRGNLNTRLGKLDAGEFDALILAAAGLKRLD 187 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ E + GQGA+ IE ++P+ +++K I H T ERAFL EL Sbjct: 188 MSDRIHQVIPSEISLHAVGQGALGIECRGDDPEILDVLKAIEHSPTAQRCYAERAFLREL 247 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I KG+ L G+V DG + + G +A +G + AQ +R Sbjct: 248 EGGCQVPIGVNTEIKGNNLILTGMVARLDGTSLIKDTVTGEATEAEALGVELAQLLRQQG 307 Query: 301 NKNVFN 306 + + + Sbjct: 308 AQEILD 313 >gi|152983553|ref|YP_001351322.1| porphobilinogen deaminase [Pseudomonas aeruginosa PA7] gi|167008817|sp|A6VE37|HEM3_PSEA7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|150958711|gb|ABR80736.1| porphobilinogen deaminase [Pseudomonas aeruginosa PA7] Length = 313 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PDLTVTLLPMTSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++++D P+ GQGA+ IE + L+ ++H DT V ERA L Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADADLHALLAPLHHADTALRVTAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V DG A +G A + Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGSQLLRAEGRAPLAQAEALGVQVADDLLAQG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AEAIL 303 >gi|254784450|ref|YP_003071878.1| hydroxymethylbilane synthase [Teredinibacter turnerae T7901] gi|237686105|gb|ACR13369.1| hydroxymethylbilane synthase [Teredinibacter turnerae T7901] Length = 324 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 112/303 (36%), Positives = 170/303 (56%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR S LAL A +S L H P + ++PL+++GD+I + L ++GGKG Sbjct: 15 KHTLRIATRKSALALWQAEFVKSELCRHH--PELAVELVPLTSRGDKILDVPLAKVGGKG 72 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E+ +I+GE D AVHS KD+P + +GL ++ RED RD +S+ +L + Sbjct: 73 LFVKELEQAIIAGEADIAVHSMKDVPMEFPQGLGLAVICEREDPRDALVSNKYSNLDAIP 132 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR++ LL R D+ V RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 133 AGAVIGTSSLRRQSQLLAMRPDLEVTFLRGNVNTRLAKLDAGEYDAIILASAGLKRLQMV 192 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E + E P+ GQGA+ IE ++ + L++ ++H T +V ERA +L+G Sbjct: 193 DRIAEFIAPEVMLPAGGQGAVGIECRTDDQETLALLQPLHHGVTEQAVLAERAMNRKLEG 252 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I GFA + + L+ G+V DG G+ DA +G A+ + Sbjct: 253 GCQVPIGGFAIHQDNQLWVRGLVADPDGSEVLYDQVIGDPADAETLGVVLAEKLLAAGAD 312 Query: 303 NVF 305 + Sbjct: 313 AIL 315 >gi|87118400|ref|ZP_01074299.1| porphobilinogen deaminase [Marinomonas sp. MED121] gi|86166034|gb|EAQ67300.1| porphobilinogen deaminase [Marinomonas sp. MED121] Length = 308 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 172/305 (56%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ K I TR S LAL A + SL ++ P + ++ ++TKGD+I N L++IGG Sbjct: 1 MKDKII-IATRESQLALWQANNVKDSLAALY--PDIQVELLGMTTKGDQILNSPLSKIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL ++ RED D F+S+ +L Sbjct: 58 KGLFVKELEHALLDGRADIAVHSMKDVPMAFPEGLGLAVICEREDPTDAFVSNKYDNLAS 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR + L R D+ + D RG + TRL KL+N + AI+LA AG+ RL+ Sbjct: 118 LPQGAVVGTSSLRRSSQLALARPDLVIKDLRGNVNTRLRKLDNQEYDAIILATAGLMRLE 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 IKE ++ +D P+ GQGA+ IE ++ +L+ + H++T+ V ERA L Sbjct: 178 MTDRIKERISDQDSLPAGGQGAMGIECRSDDADMIKLLAPLQHQETYYRVTAERAVNERL 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C++ IA F+ +G LY G+V + DG G++ DA +G A+ + Sbjct: 238 NGGCQAPIAAFSLLEGDELYLRGLVGSVDGSTILRDEIRGSKNDAHALGVQLAEKLIAAG 297 Query: 301 NKNVF 305 + Sbjct: 298 ADTLL 302 >gi|284053907|ref|ZP_06384117.1| porphobilinogen deaminase [Arthrospira platensis str. Paraca] Length = 322 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 105/307 (34%), Positives = 159/307 (51%), Gaps = 5/307 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + RI +R S LAL + + L + P + +ST+GD+I + L +IG K Sbjct: 8 QTRTIRIASRKSQLALVQTYWVQEELQK--RFPDIKFEVHTMSTQGDKILDVALAKIGDK 65 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 GLFT+E+E +++ + D AVHS KD+PT L +GL + RED D + H + L Sbjct: 66 GLFTKELEVGMLNHDTDMAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVHENHRDKQL 125 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L +V+GTSSLRR A L + D RG + TRL KL+ + AI+LA AG+KR Sbjct: 126 DTLPPGAVVGTSSLRRLAQLRHNFPHLEFKDIRGNLNTRLQKLDEGQYDAIILAVAGLKR 185 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L I +++ E + GQGA+ IE + + E+VK + H T + ERAFL Sbjct: 186 LGMADRIHQVIPAEISLHAVGQGALGIECREGDTEILEVVKALEHTATAQRCHSERAFLR 245 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 EL+G C+ I +G L G+V + DGK + + G DA +G + A ++ Sbjct: 246 ELEGGCQVPIGVNTMVEGDRLTLTGMVASLDGKRLIKDTVTGQASDAEQLGIELANQLKQ 305 Query: 299 ISNKNVF 305 + + Sbjct: 306 QGAEEIL 312 >gi|15603677|ref|NP_246751.1| porphobilinogen deaminase [Pasteurella multocida subsp. multocida str. Pm70] gi|12722234|gb|AAK03896.1| Pbg [Pasteurella multocida subsp. multocida str. Pm70] Length = 312 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 109/306 (35%), Positives = 165/306 (53%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K RI TR SPLAL A ++ L +H + ++P+ TKGD I + L +IGG Sbjct: 5 MTRKSLRIATRQSPLALWQANYVKACLEKIHA--GLVVELVPMVTKGDVILDTPLAKIGG 62 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ GE D AVHS KD+P + GL +S RED RD F+S++ ++L + Sbjct: 63 KGLFVKELEQALLKGEADIAVHSMKDVPMQFPAGLMLSTICQREDPRDAFVSNSYRTLME 122 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L + R D+ + RG + TRL KL+N AI+LA AG+ RL Sbjct: 123 LPAGAVVGTSSLRRQCQLKQLRPDLHIHSLRGNVGTRLAKLDNGDYDAIILAAAGLIRLG 182 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +++ I ++++ P+ GQGA+ IE + + L+ + +T V ERA L Sbjct: 183 QQQRITSLIDVTQCLPAVGQGAVGIECRQE-AEIELLLAPLADPETTACVLAERAMNRHL 241 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + L+ +V DG DA +G A+ + Sbjct: 242 QGGCQVPIAGYAIIEEGQLFLRALVGEVDGSSILRAEGRSAVADAETLGIQVAEKLLQQG 301 Query: 301 NKNVFN 306 + Sbjct: 302 ADKILQ 307 >gi|146305321|ref|YP_001185786.1| porphobilinogen deaminase [Pseudomonas mendocina ymp] gi|145573522|gb|ABP83054.1| hydroxymethylbilane synthase [Pseudomonas mendocina ymp] Length = 312 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 109/302 (36%), Positives = 163/302 (53%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGGKGL Sbjct: 3 REIRIATRKSALALWQAEYVKARLEQAH--PGLLVSLVPMVSRGDKLLDAPLAKIGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL L Sbjct: 61 FVKELETALLENEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTYDSLDALPA 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL + Sbjct: 121 GSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFQD 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ ++ ED P+ GQGA+ IE + + L+ ++H +T V ERA L+G Sbjct: 181 RIRSSISAEDSLPAGGQGAVGIECRSADAEIHALLAPLHHRETALRVTAERALNKRLNGG 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IA +A + L+ G+V DG + DA +G A+ + + Sbjct: 241 CQVPIACYALLENDQLWLRGLVGQPDGGLLLRAEHRAASSDAEALGVRVAEALLAQGAEA 300 Query: 304 VF 305 + Sbjct: 301 IL 302 >gi|296392119|ref|ZP_06881594.1| porphobilinogen deaminase [Pseudomonas aeruginosa PAb1] Length = 313 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSALHALLEPLHHTDTALRVTAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V DG +A +G A+ + Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLAEAEALGVRVAEDLLEQG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 AEAILE 304 >gi|218246829|ref|YP_002372200.1| porphobilinogen deaminase [Cyanothece sp. PCC 8801] gi|218167307|gb|ACK66044.1| porphobilinogen deaminase [Cyanothece sp. PCC 8801] Length = 320 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 161/306 (52%), Gaps = 5/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIG+R S LAL + + L H P H + +ST+GD+I + L +IG KG Sbjct: 7 TRSIRIGSRKSQLALVQTYWVQKELQRHH--PQHQFDVETMSTQGDKILDVALAKIGDKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 LFT+E+E + ++D AVHS KD+PT L GL + R D D + + + L Sbjct: 65 LFTKELEVAMEQNQVDLAVHSLKDLPTNLPTGLILGCVTERVDPADALVVNKKHLDKQLD 124 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +VIGTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG++RL Sbjct: 125 TLPEGAVIGTSSLRRLAQLRHHFPHLTFKDVRGNVNTRLKKLDEGEYDAIILAVAGLQRL 184 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I +++ E + GQGA+ IE + + L+KV+ HE T D ERAFL E Sbjct: 185 DMSDRIHQVIPSEISLHAVGQGALGIECREGDEEVLALLKVLEHEPTRDRCYAERAFLRE 244 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I +G TL G+V + DG+ + + +G R A +GRD A +R Sbjct: 245 LEGGCQVPIGVNTEIEGDTLTLTGMVASLDGQTLLKDTISGPRESAEQLGRDLANRLREA 304 Query: 300 SNKNVF 305 V Sbjct: 305 GAGEVL 310 >gi|254502424|ref|ZP_05114575.1| porphobilinogen deaminase [Labrenzia alexandrii DFL-11] gi|222438495|gb|EEE45174.1| porphobilinogen deaminase [Labrenzia alexandrii DFL-11] Length = 308 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 142/305 (46%), Positives = 199/305 (65%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ P RIGTR S LALA A ETR+ LM H +P I+ + T GD+I +R L+E+GG Sbjct: 1 MQSNPLRIGTRGSALALAQAHETRARLMAAHDLPEDAFEIVVIKTSGDQIQDRPLSEVGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ ++ G ID AVHS+KDMPT L GL ++A+LPRED+RD F+S A++L D Sbjct: 61 KGLFTKEIEEAMLDGRIDLAVHSSKDMPTVLPDGLALTAFLPREDVRDAFLSPKAKTLMD 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+G+SSLRR+A++ R R DI V+ +RG ++TRL KL + A LLAYAG++RL Sbjct: 121 LPHGAVVGSSSLRRQAMIKRLRPDIEVVMYRGNLQTRLRKLAEGEVDATLLAYAGLRRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ + +L EDF P+ GQGAICIE+ + + E+++ I+ +T ++ ERAFLA L Sbjct: 181 LEEEVTSLLETEDFLPAVGQGAICIESREGDERTLEMLQAIHDRETQIRLDAERAFLAVL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ I G A G L G VL DG H+ R+G DA+ IG+ A + ++ Sbjct: 241 DGSCRTPIGGLALLNGDELTLKGTVLKPDGSEVHDEVRSGGAVDAVQIGQAAGEALKAKM 300 Query: 301 NKNVF 305 Sbjct: 301 GPGFL 305 >gi|24211767|sp|Q9CK24|HEM3_PASMU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 309 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 109/306 (35%), Positives = 165/306 (53%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K RI TR SPLAL A ++ L +H + ++P+ TKGD I + L +IGG Sbjct: 2 MTRKSLRIATRQSPLALWQANYVKACLEKIHA--GLVVELVPMVTKGDVILDTPLAKIGG 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ GE D AVHS KD+P + GL +S RED RD F+S++ ++L + Sbjct: 60 KGLFVKELEQALLKGEADIAVHSMKDVPMQFPAGLMLSTICQREDPRDAFVSNSYRTLME 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L + R D+ + RG + TRL KL+N AI+LA AG+ RL Sbjct: 120 LPAGAVVGTSSLRRQCQLKQLRPDLHIHSLRGNVGTRLAKLDNGDYDAIILAAAGLIRLG 179 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +++ I ++++ P+ GQGA+ IE + + L+ + +T V ERA L Sbjct: 180 QQQRITSLIDVTQCLPAVGQGAVGIECRQE-AEIELLLAPLADPETTACVLAERAMNRHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + L+ +V DG DA +G A+ + Sbjct: 239 QGGCQVPIAGYAIIEEGQLFLRALVGEVDGSSILRAEGRSAVADAETLGIQVAEKLLQQG 298 Query: 301 NKNVFN 306 + Sbjct: 299 ADKILQ 304 >gi|50083560|ref|YP_045070.1| porphobilinogen deaminase [Acinetobacter sp. ADP1] gi|55976395|sp|Q6FFA9|HEM3_ACIAD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|49529536|emb|CAG67248.1| porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Acinetobacter sp. ADP1] Length = 311 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 115/302 (38%), Positives = 166/302 (54%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +I TR SPLAL A R L ++ P + ++ T+GD+I + L +IGGKGL Sbjct: 7 QTLKIATRQSPLALWQAEHIRDRLQALY--PELKVELVKFVTQGDKILDTPLAKIGGKGL 64 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ S L L Sbjct: 65 FVKELEAALLDGRADLAVHSMKDVPMHLPEGLSLAVICEREDPLDAFVSNHVMSFDQLPL 124 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL Sbjct: 125 GARVGTSSLRRKCQILKQRPDLEIIDLRGNVGTRLAKLDDGQYDAIVLASAGLKRLGLIS 184 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ +N E P+ GQGA+ +E N+ K +L+ + H+ T V ERAF A L+G Sbjct: 185 RIRHSINAEISLPAVGQGALGLECRANDKKILDLIAPLAHQPTSACVRAERAFNAYLEGG 244 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IAGFA L G V + DGK + G+ A +G A+ + Sbjct: 245 CQVPIAGFATLTQECLTLEGRVGSVDGKTLLKDHVEGHADQAEVLGVQLAKQLLAQGAGE 304 Query: 304 VF 305 + Sbjct: 305 LL 306 >gi|330976469|gb|EGH76521.1| porphobilinogen deaminase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 313 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLIVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G + + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGSVLLHADARAPQTSAQALGVQVAEALLEQG 298 Query: 301 NKNVF 305 ++ Sbjct: 299 AADIL 303 >gi|257059870|ref|YP_003137758.1| porphobilinogen deaminase [Cyanothece sp. PCC 8802] gi|256590036|gb|ACV00923.1| porphobilinogen deaminase [Cyanothece sp. PCC 8802] Length = 320 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 161/306 (52%), Gaps = 5/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIG+R S LAL + + L H P H + +ST+GD+I + L +IG KG Sbjct: 7 TRSIRIGSRKSQLALVQTYWVQKELQRHH--PQHQFDVETMSTQGDKILDVALAKIGDKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSLK 119 LFT+E+E + ++D AVHS KD+PT L GL + R D D + H + L Sbjct: 65 LFTKELEVAMEQNQVDLAVHSLKDLPTNLPTGLILGCVTERVDPADALVVNQKHLDKQLD 124 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +VIGTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG++RL Sbjct: 125 TLPEGAVIGTSSLRRLAQLRHHFPHLTFKDVRGNVNTRLKKLDEGEYDAIILAVAGLQRL 184 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I +++ E + GQGA+ IE + + L+KV+ HE T D ERAFL E Sbjct: 185 DMSDRIHQVIPSEISLHAVGQGALGIECREGDEEVLALLKVLEHEPTRDRCYAERAFLRE 244 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I +G TL G+V + DG+ + + +G R A +GRD A +R Sbjct: 245 LEGGCQVPIGVNTEIEGDTLTLTGMVASLDGQTLLKDTISGPRESAEQLGRDLANRLREA 304 Query: 300 SNKNVF 305 V Sbjct: 305 GAGEVL 310 >gi|289625848|ref|ZP_06458802.1| porphobilinogen deaminase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646420|ref|ZP_06477763.1| porphobilinogen deaminase [Pseudomonas syringae pv. aesculi str. 2250] gi|298484668|ref|ZP_07002771.1| Porphobilinogen deaminase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160808|gb|EFI01826.1| Porphobilinogen deaminase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320326724|gb|EFW82769.1| porphobilinogen deaminase [Pseudomonas syringae pv. glycinea str. B076] gi|320331302|gb|EFW87245.1| porphobilinogen deaminase [Pseudomonas syringae pv. glycinea str. race 4] gi|330867941|gb|EGH02650.1| porphobilinogen deaminase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330881670|gb|EGH15819.1| porphobilinogen deaminase [Pseudomonas syringae pv. glycinea str. race 4] Length = 313 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL + Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G + + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPAGSVLLHAEARAPQTSAQALGVQVAEALLAQG 298 Query: 301 NKNVF 305 ++ Sbjct: 299 AADIL 303 >gi|225848376|ref|YP_002728539.1| porphobilinogen deaminase [Sulfurihydrogenibium azorense Az-Fu1] gi|225644642|gb|ACN99692.1| porphobilinogen deaminase [Sulfurihydrogenibium azorense Az-Fu1] Length = 308 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 110/304 (36%), Positives = 179/304 (58%), Gaps = 6/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL A + + +H + + ++ ++T GD+I + L +IGGKGLF Sbjct: 2 KVRIGTRKSQLALWQANYIANLINQIHGV---EVELVKITTSGDKILDVPLAKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE ++ GEID AVHS KD+PT+L +GL I A RED RD F+S +SLKDL Sbjct: 59 VKEIEDAMLKGEIDIAVHSLKDVPTQLPEGLDIIAITEREDPRDAFLSTKYKSLKDLPAG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRRK+ +++ R D+ + D RG ++TR+ KL + AI+LAYAG+KRL + Sbjct: 119 AVVGTSSLRRKSQIMKMRDDLIINDLRGNVDTRIRKLEEGQYDAIILAYAGLKRLGLDSK 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + ++ P+ QG + IE V++ + +++++ IN+++++ ER+FL L+G C Sbjct: 179 ASYIFSPQEMIPAVCQGFLGIEARVDDERIKKILEPINNQESFIRATAERSFLKTLEGGC 238 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIRFISN 301 + + + K ++ G + +GK F + S + N A +G+ A + Sbjct: 239 QVPLGAYCEIKDDFIHITGFIADLEGKTFIKESLSEKLTNINQAKELGQRLANILLKRGG 298 Query: 302 KNVF 305 K++ Sbjct: 299 KDIL 302 >gi|66043333|ref|YP_233174.1| porphobilinogen deaminase [Pseudomonas syringae pv. syringae B728a] gi|289677629|ref|ZP_06498519.1| porphobilinogen deaminase [Pseudomonas syringae pv. syringae FF5] gi|302187597|ref|ZP_07264270.1| porphobilinogen deaminase [Pseudomonas syringae pv. syringae 642] gi|75504025|sp|Q500N6|HEM3_PSEU2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|63254040|gb|AAY35136.1| Porphobilinogen deaminase [Pseudomonas syringae pv. syringae B728a] gi|330901069|gb|EGH32488.1| porphobilinogen deaminase [Pseudomonas syringae pv. japonica str. M301072PT] gi|330952274|gb|EGH52534.1| porphobilinogen deaminase [Pseudomonas syringae Cit 7] gi|330970393|gb|EGH70459.1| porphobilinogen deaminase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 313 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G + + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGSVLLHADARAPQTSAQALGVQVAEALLEQG 298 Query: 301 NKNVF 305 ++ Sbjct: 299 AADIL 303 >gi|293393888|ref|ZP_06638195.1| hydroxymethylbilane synthase [Serratia odorifera DSM 4582] gi|291423715|gb|EFE96937.1| hydroxymethylbilane synthase [Serratia odorifera DSM 4582] Length = 313 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 118/305 (38%), Positives = 171/305 (56%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQQRLMASH--PDLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P + GL + R+D RD F+S+ SL Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPAGLGLVTICERDDPRDAFVSNRFASLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L + R D+ V D RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPQGSVVGTSSLRRQCQLRQRRPDLLVRDLRGNVGTRLAKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ ++ E+ P+ GQGA+ IE +++ + L+ +NHE T V ERA L Sbjct: 179 LEQRIRSPMSPEESLPAVGQGAVGIECRLDDAVTRALLAPLNHELTATRVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G TL+ +V A DG + R G A ++G + A+ + Sbjct: 239 EGGCQVPIGSYAELDGDTLWLRALVGAPDGSLMVRGERRGPAAQAEHMGIELAEELLAKG 298 Query: 301 NKNVF 305 +++ Sbjct: 299 ARDIL 303 >gi|90416175|ref|ZP_01224107.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2207] gi|90331900|gb|EAS47114.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2207] Length = 326 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 104/304 (34%), Positives = 162/304 (53%), Gaps = 4/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RI TR SPLAL A ++ L++ H P ++ ++ ++T+GD + + L ++GGKGL Sbjct: 18 QTIRIATRKSPLALWQAEFVKAKLLENH--PDLDVQLVAMTTRGDVLLDTPLAKVGGKGL 75 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++ D AVHS KD+P + GL ++ RED D F+S+ +L +L Sbjct: 76 FVKELEVAMLENRADIAVHSMKDVPMEFPPGLGLTVICEREDPLDAFVSNRYANLAELPP 135 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+GTSSLRR+ + D+ + D RG + TRL KL+ AI+LA AG+ RL E Sbjct: 136 GSVVGTSSLRRQCQIRAAFPDLQIKDLRGNVNTRLAKLDYGDYDAIILASAGLIRLGMEA 195 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I L E P+ GQGA+ IE +++ EL+K + H T V ERA L+G Sbjct: 196 RIASRLESELCLPAGGQGAVGIECRLDDQATIELLKPLEHSQTRIRVTAERALNRRLEGG 255 Query: 244 CKSAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IA +A G +L G+V + DG + + + A +G + A+ + Sbjct: 256 CQVPIACYAELDEAGESLQLRGLVGSVDGSLILQDQLSAPVAQAEQLGIELAERLLAAGA 315 Query: 302 KNVF 305 + Sbjct: 316 GEIL 319 >gi|172039291|ref|YP_001805792.1| porphobilinogen deaminase [Cyanothece sp. ATCC 51142] gi|171700745|gb|ACB53726.1| porphobilinogen deaminase [Cyanothece sp. ATCC 51142] Length = 331 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 104/307 (33%), Positives = 161/307 (52%), Gaps = 5/307 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RIG+R S LAL + + L + P + +ST+GD+I + L +IG K Sbjct: 18 STRTIRIGSRKSQLALVQTYWIQEELQKHY--PDRQFDVETMSTQGDKILDVALAKIGDK 75 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSL 118 GLFT+E+E ++ ++D AVHS KD+PT L +GL + R + D + H + L Sbjct: 76 GLFTKELETAMLQNQVDFAVHSLKDLPTNLPEGLMLGCVTERVNPADALVVNETHQDKQL 135 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L SVIGTSSLRR A L ++ D RG + TRL+KL+ + AI+LA AG++R Sbjct: 136 DTLPEGSVIGTSSLRRLAQLRHHYPHLTFKDVRGNVNTRLSKLDAGEYDAIILAVAGLQR 195 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L I +++ + + GQGA+ IE +P+ +L+KV+ H +T D ERAFL Sbjct: 196 LDMSDRIHQVIPDDISLHAVGQGALGIECRSGDPEILDLLKVLEHTETRDRCYAERAFLR 255 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +L+G C+ I + + L G+V + DGK + + G A +G + A +R Sbjct: 256 QLEGGCQVPIGVNTKIENNILTLTGMVASLDGKTLIKDTIQGEAAQAEKLGEELALRLRD 315 Query: 299 ISNKNVF 305 + Sbjct: 316 EGATEIL 322 >gi|330985679|gb|EGH83782.1| porphobilinogen deaminase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 313 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL + Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ ++ AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDASEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G + + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGSVLLHAEARAPQTSAQALGVQVAEALLAQG 298 Query: 301 NKNVF 305 ++ Sbjct: 299 AADIL 303 >gi|257485539|ref|ZP_05639580.1| porphobilinogen deaminase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331011831|gb|EGH91887.1| porphobilinogen deaminase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 313 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL + Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G + + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPAGSVLLHAEARAPQTSAQALGVQVAEALLAQG 298 Query: 301 NKNVF 305 ++ Sbjct: 299 AADIL 303 >gi|282901179|ref|ZP_06309108.1| Porphobilinogen deaminase [Cylindrospermopsis raciborskii CS-505] gi|281193879|gb|EFA68847.1| Porphobilinogen deaminase [Cylindrospermopsis raciborskii CS-505] Length = 322 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 111/307 (36%), Positives = 161/307 (52%), Gaps = 5/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIG+R S LAL + + L + P + + +ST+GD+I + L +IG KG Sbjct: 8 SRIIRIGSRKSELALVQTYWVQEQLQKSY--PDIDFQVHTMSTQGDKILDVALAKIGDKG 65 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119 LFT+E+E +I+ EID AVHS KD+PT L +GL ++A RE+ D + H Q+L Sbjct: 66 LFTKELELGMINQEIDFAVHSLKDLPTNLPEGLTLAAITERENPADAVVFHQNHLGQTLA 125 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L SVIGTSSLRR A L + D RG + TR+ KL+ + A++LA AG++RL Sbjct: 126 TLPPGSVIGTSSLRRLAQLRHKFPHFTFKDVRGNLNTRMTKLDAGEYDALILAVAGLERL 185 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I EIL + + GQGA+ IE N+ + ++K I H T D ER+FL Sbjct: 186 NMHHRIHEILPPDISLHAVGQGALGIECRENDLELITILKAIEHPQTRDRCLAERSFLRS 245 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I G TL GIV + +G+ + + G DA +G A +R Sbjct: 246 LEGGCQVPIGVNTEIDGETLTLTGIVASVNGENLVKNTITGAATDAEKLGTQLANILREQ 305 Query: 300 SNKNVFN 306 + Sbjct: 306 GATEILE 312 >gi|288940050|ref|YP_003442290.1| porphobilinogen deaminase [Allochromatium vinosum DSM 180] gi|288895422|gb|ADC61258.1| porphobilinogen deaminase [Allochromatium vinosum DSM 180] Length = 308 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 111/300 (37%), Positives = 169/300 (56%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLA+ A + L +H P + II ++TKGD++ + L+++GGKGLF Sbjct: 5 IRIATRKSPLAMWQAEHVTARLKALH--PGLTVEIIGMTTKGDQLLDSPLSKVGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ +++GE D AVHS KD+P + +GL ++ + RE+ D F+S+T +L +L + Sbjct: 63 KELEQGMLAGEADIAVHSMKDVPVEFPEGLHLAVIMERENPYDAFVSNTYANLAELPEGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+ RL E I Sbjct: 123 CVGTSSLRRQCQLADRRPDLRIEPLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFESRI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ ++ D P+ GQGAI IE V++ + +L+ + DT D V ERA A L+G C+ Sbjct: 183 RDCIDPVDSLPAIGQGAIGIECRVDDERVHQLIAPLADRDTTDRVLAERAMNARLNGGCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 I G A G L G+V +DG +G R +A IG A + + Sbjct: 243 VPIGGHAVLDGDRLILKGLVGTTDGSRILRAEASGPRAEAEAIGVRVADDLLGQGADAIL 302 >gi|238756296|ref|ZP_04617611.1| Porphobilinogen deaminase [Yersinia ruckeri ATCC 29473] gi|238705502|gb|EEP97904.1| Porphobilinogen deaminase [Yersinia ruckeri ATCC 29473] Length = 315 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 162/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A + L H + ++P+ T+GD I + L ++GG Sbjct: 3 MSDKIIRIATRQSPLAMWQAHYVQQLLQTCHS--GLKVELVPMVTRGDIILDTPLAKVGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + R+D RD F+S+ Q + D Sbjct: 61 KGLFVKELELALLEDRADIAVHSMKDVPIAFPQGLGLVTICERDDPRDAFVSNNYQRMDD 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L + R D+ V D RG + TRL+KL+ AI+LA AG+ RL Sbjct: 121 LPAGSIVGTSSLRRQCQLRQRRPDLIVKDLRGNVGTRLSKLDQGDYDAIILAVAGLNRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ ++ E+ P+ GQGA+ IE +++ + L+ +NH T V ERA L Sbjct: 181 LKDRIRYAMSPEESLPAVGQGAVGIECRLDDNLTRALLAPLNHRPTELRVCAERAMNTRL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + TL+ +V A DG R G A +G + A + Sbjct: 241 EGGCQVPIGSYAILEDDTLWLRALVGAPDGSQMICGERRGPATHAEQMGIELADELLSRG 300 Query: 301 NKNVF 305 K + Sbjct: 301 AKAIL 305 >gi|254473214|ref|ZP_05086612.1| porphobilinogen deaminase [Pseudovibrio sp. JE062] gi|211957935|gb|EEA93137.1| porphobilinogen deaminase [Pseudovibrio sp. JE062] Length = 307 Score = 387 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 136/307 (44%), Positives = 195/307 (63%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KP RIGTR S LALA A ETR+ L H + + I+ + T GD+I +R L+E GG Sbjct: 1 MQTKPIRIGTRGSALALAQAHETRARLAKAHGLTDDDFEIVVIKTTGDQIQDRPLSEAGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+ ID AVHS+KDMPT L GL ++AYLPRED+RD FIS + L D Sbjct: 61 KGLFTKEIEEALLDKSIDLAVHSSKDMPTVLPDGLGMTAYLPREDVRDAFISPKVEKLTD 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+G+SSLRR+A + R R D+ V+ +RG ++TRL KL+ A LAYAG++RL Sbjct: 121 LPQGAVVGSSSLRRQAQIKRLRPDLDVVMYRGNLQTRLRKLDEGVVDATFLAYAGLRRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + ++ ++++E F P+ GQGAI IE + + + ++ I+H +T + ERA+LAE+ Sbjct: 181 QGDLVTSLMDLEHFLPAVGQGAIGIEARLGDEETARILAPIHHAETESRLLLERAYLAEM 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG ++ +G + F G V+ DG H V G DA IGR+ + ++ S Sbjct: 241 DGSCRTPIAGLSHVEGDRIKFRGEVIKPDGSQTHTVEGEGPVSDAEEIGRELGKELKAKS 300 Query: 301 NKNVFNF 307 N Sbjct: 301 GPNFLEL 307 >gi|237809861|ref|YP_002894301.1| porphobilinogen deaminase [Tolumonas auensis DSM 9187] gi|237502122|gb|ACQ94715.1| porphobilinogen deaminase [Tolumonas auensis DSM 9187] Length = 308 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 107/301 (35%), Positives = 160/301 (53%), Gaps = 3/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L H P + ++P+ST+GD+I + L +IGGKGLF Sbjct: 4 LRIATRKSPLALWQANFVKQQLELHH--PGLQVTLVPMSTQGDKILDTPLAKIGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ ++ D AVHS KD+P GL ++ R+D D F+S S+ +L + Sbjct: 62 KELEQAMLENRADIAVHSMKDVPVDFPDGLGLAVICERDDPYDAFVSSRFASVYELPEGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ L R D+ + D RG + TRL KL+ AI+LA AG++RL K + I Sbjct: 122 VVGTSSLRRQCQLRAQRPDLVIRDLRGNVNTRLAKLDAGDYDAIILAAAGLRRLDKAERI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE + + + L+ + H T V ERA L G C+ Sbjct: 182 RSRLPPELSLPANGQGAVGIECRLGDTQTLALLASLEHATTRYCVMAERAMNRTLQGGCQ 241 Query: 246 SAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 I FA + L+ G+V + DGK +G + A +G+ A+ + ++ Sbjct: 242 VPIGAFAEMQDNDHLWLRGLVGSVDGKQIIHGDISGPKEQAEELGKLLAEQLLVQGADDI 301 Query: 305 F 305 Sbjct: 302 L 302 >gi|126658960|ref|ZP_01730102.1| porphobilinogen deaminase [Cyanothece sp. CCY0110] gi|126619758|gb|EAZ90485.1| porphobilinogen deaminase [Cyanothece sp. CCY0110] Length = 317 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 104/307 (33%), Positives = 161/307 (52%), Gaps = 5/307 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RIG+R S LAL + + L + P + +ST+GD+I + L +IG K Sbjct: 4 SSRAIRIGSRKSQLALVQTYWIQEQLQKHY--PDRQFDVETMSTQGDKILDVALAKIGDK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSL 118 GLFT+E+E ++ ++D AVHS KD+PT L GL + R + D + H + L Sbjct: 62 GLFTKELETAMLQNQVDFAVHSLKDLPTNLPDGLMLGCVTERVNPADALVVNEKHKDKQL 121 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L SVIGTSSLRR A L ++ D RG + TRL+KL+ + AI+LA AG++R Sbjct: 122 DTLPEGSVIGTSSLRRLAQLRHHYPHLTFKDVRGNVNTRLSKLDAGEYDAIILAVAGLQR 181 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L I +++ + + GQGA+ IE +P+ +L+K + H +T D ERAFL Sbjct: 182 LDMSDRIHQVIPDDISLHAVGQGALGIECRTGDPEILDLLKALEHPETRDRCYAERAFLR 241 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 EL+G C+ I + + L G+V + DGK + + G + A +G++ A +R Sbjct: 242 ELEGGCQVPIGVNTKIENNFLTLTGMVASLDGKTLIKDTIEGEQDQAEKLGQELAMRLRD 301 Query: 299 ISNKNVF 305 + Sbjct: 302 AGATEIL 308 >gi|206889552|ref|YP_002248559.1| porphobilinogen deaminase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741490|gb|ACI20547.1| porphobilinogen deaminase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 311 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 177/306 (57%), Gaps = 3/306 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++ IG+R S LA+ A + L ++ P + I + T GD+I + L +IGGK Sbjct: 4 KRNKIVIGSRGSKLAMWQANWVKDKLQTLY--PELKVEIEKIKTTGDKILDAPLAKIGGK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +EIE+ L+S +D AVHS KD+PT++ +GLQISA RED RD FIS L +L Sbjct: 62 GLFVKEIEEALLSKRVDLAVHSMKDVPTEIPEGLQISAICEREDPRDAFISKDGVLLNEL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSSLRR L R+D+ + RG ++TR+ KL + + AI+LA AG+KR+ Sbjct: 122 PQEAVLGTSSLRRTVQLKALRNDLVIKPLRGNVDTRIRKLKDGEFQAIVLAMAGVKRMGV 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E ++ + + + P+ GQGAI IET V++ EL+K +NHE+T + ERAFL+ + Sbjct: 182 ENLVTQAFSEDLMIPAIGQGAIGIETRVDDDFVNELIKPLNHEETAICILAERAFLSVMG 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ +A A ++L G++ +GK+ + R G+ A ++G + A + Sbjct: 242 GGCQVPLACHARIVNNSLKIVGMIGDPEGKMPVIKGFREGSLSQAQSLGVELANELLHRG 301 Query: 301 NKNVFN 306 K + Sbjct: 302 GKEILE 307 >gi|325272336|ref|ZP_08138739.1| porphobilinogen deaminase [Pseudomonas sp. TJI-51] gi|324102530|gb|EGB99973.1| porphobilinogen deaminase [Pseudomonas sp. TJI-51] Length = 313 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAH--PELRVTLVPMVSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+ SL+ Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNHFASLEA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + L+ ++H DT D V ERA L Sbjct: 179 FEDRITATISVDDSLPAGGQGAVGIECRSADHAIHALLAPLHHHDTADRVVAERAMNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V G R A +G + A+++ Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRATAEALGVEVAEHLLGQG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AEAIL 303 >gi|253991598|ref|YP_003042954.1| porphobilinogen deaminase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253783048|emb|CAQ86213.1| porphobilinogen deaminase [Photorhabdus asymbiotica] Length = 313 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A + L + P + ++P+ T+GD I + L ++GG Sbjct: 1 MSTKTIRIATRQSPLAMWQALYVQQKLQQFY--PDLEVQLVPMVTQGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S SL + Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPISFPEGLGLVTICERDDPRDAFVSAKYHSLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+++ D RG + TRL+KL+N AI+LA AG+KRL+ Sbjct: 119 LPTGSIVGTSSLRRQCQLRELRPDLTIRDLRGNVGTRLSKLDNGHYDAIILAVAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ L+ + P+ GQGA+ IE +++ + + L+ +NH DT V ER L Sbjct: 179 LHDRIRTPLSAKQLLPAVGQGAVGIECRLDDQQTRALLAPLNHYDTEICVLAERTMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + ++ +V A DG + R DA G + A+ + Sbjct: 239 EGGCQVPIGSYAIWQDGKIWLRALVGAPDGSVIIRGERTVLPKDACQAGLELAEELLERG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|330501254|ref|YP_004378123.1| porphobilinogen deaminase [Pseudomonas mendocina NK-01] gi|328915540|gb|AEB56371.1| porphobilinogen deaminase [Pseudomonas mendocina NK-01] Length = 312 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 109/303 (35%), Positives = 160/303 (52%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGGKG Sbjct: 2 SREIRIATRKSALALWQAEYVKARLEQAH--PGLKVSLVPMVSRGDKLLDAPLAKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL L Sbjct: 60 LFVKELETALLENEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTYDSLDALP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 120 AGSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFA 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I+ ++ ED P+ GQGA+ IE + L+ ++H +T V ERA L+G Sbjct: 180 DRIRSSISAEDSLPAGGQGAVGIECRSADSDVHALLAPLHHRETALRVTAERALNKHLNG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IA +A + L+ G+V DG + DA +G A+ + Sbjct: 240 GCQVPIACYALLEDDQLWLRGLVGQPDGGLLLRAEERAASGDAEALGVRVAEALLAQGAD 299 Query: 303 NVF 305 + Sbjct: 300 AIL 302 >gi|237801592|ref|ZP_04590053.1| porphobilinogen deaminase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024452|gb|EGI04508.1| porphobilinogen deaminase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 313 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A +S L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSTREIRIATRQSALALWQAEYVKSRLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLEDRADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFDSLQA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I +++ED P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FEDRITSAISVEDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G + + A +G + A+ + Sbjct: 239 NGGCQVPIACYAILEGDDVWLRGLVGDPSGSVLLHAEARAPQTSAQALGVEVAEALLAQG 298 Query: 301 NKNVF 305 + Sbjct: 299 AAKIL 303 >gi|256821394|ref|YP_003145357.1| porphobilinogen deaminase [Kangiella koreensis DSM 16069] gi|256794933|gb|ACV25589.1| porphobilinogen deaminase [Kangiella koreensis DSM 16069] Length = 311 Score = 387 bits (994), Expect = e-105, Method: Composition-based stats. Identities = 116/306 (37%), Positives = 169/306 (55%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLA+ A +S L +H P + ++P++T+GD+I LT+IGG Sbjct: 1 MSISTLRIATRQSPLAMWQAEYVQSRLQQLH--PDLTVELVPMTTQGDKILGTPLTKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P + +GL++ RED D F+S+ +L D Sbjct: 59 KGLFVKELEQAMLEGRADIAVHSMKDVPYQFPEGLELKVICEREDPTDAFVSNKYHNLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRRK LLR R D+ + D RG + TRL+KL++ AI+LA AG+KRL Sbjct: 119 LPCGANVGTSSLRRKIQLLRARPDLKITDLRGNVGTRLSKLDDGNYDAIVLASAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ E P+PGQGA+ IE N+P +++ + E T V ER L Sbjct: 179 LEERIRSQFEPELMLPAPGQGAVGIEARTNDPDLDAILQPLQDETTSLRVLAERTITKTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 SC+ +A FA TL +V D + E S G DA+ IG +Q + + Sbjct: 239 QASCQVPVAAFATINDDTLSLRALVGGVD-QQIIEASAEGPAQDALAIGHKVSQELLELG 297 Query: 301 NKNVFN 306 + + Sbjct: 298 ARELIQ 303 >gi|167031229|ref|YP_001666460.1| porphobilinogen deaminase [Pseudomonas putida GB-1] gi|189028150|sp|B0KH05|HEM3_PSEPG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166857717|gb|ABY96124.1| porphobilinogen deaminase [Pseudomonas putida GB-1] Length = 313 Score = 387 bits (994), Expect = e-105, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHADTADRVVAERALNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V G R A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRTAAETLGVQVAEDLLSQG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AEAIL 303 >gi|90023307|ref|YP_529134.1| hydroxymethylbilane synthase [Saccharophagus degradans 2-40] gi|89952907|gb|ABD82922.1| hydroxymethylbilane synthase [Saccharophagus degradans 2-40] Length = 308 Score = 387 bits (994), Expect = e-105, Method: Composition-based stats. Identities = 109/302 (36%), Positives = 170/302 (56%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RI TR S LAL A + ++ L ++ P + + PL ++GD+I + L ++GGKGL Sbjct: 2 KKIRIATRKSELALWQANDVKAKLEALY--PSLEVELFPLVSRGDKILDVPLAKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L++ E D AVHS KD+P + +GL+++ L RED RD ++S ++L L Sbjct: 60 FVKELEHALLADEADIAVHSMKDVPMEFPEGLELAVILEREDPRDAWVSAGYENLDALPA 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 V+GTSSLRR++ +L R DI+V RG + TRL KL+ + AI+LA AG+KRLK Sbjct: 120 GGVVGTSSLRRQSQILARRPDITVKFLRGNVNTRLAKLDAGEYDAIILAAAGLKRLKFGD 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L+ E+ P+ GQGA+ IE + + +L++ ++H T + V ERA L+G Sbjct: 180 RIRSYLSPEESLPAGGQGAVGIECRSADSETLKLLQALHHTITAEQVLAERAMNRRLEGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I FA + + L+ G+V DG G D +G + A+ + Sbjct: 240 CQVPIGCFAVHQNNQLWLRGLVADPDGSKVIYDEMTGAAADGEKMGVELAEKLLAAGADK 299 Query: 304 VF 305 + Sbjct: 300 IL 301 >gi|188996629|ref|YP_001930880.1| porphobilinogen deaminase [Sulfurihydrogenibium sp. YO3AOP1] gi|188931696|gb|ACD66326.1| porphobilinogen deaminase [Sulfurihydrogenibium sp. YO3AOP1] Length = 310 Score = 387 bits (994), Expect = e-105, Method: Composition-based stats. Identities = 107/306 (34%), Positives = 177/306 (57%), Gaps = 8/306 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL A L ++H + ++ ++T+GD+I + L +IGGKGLF Sbjct: 2 KIRIGTRKSQLALWQANYIADRLREIH---GIEVELVKITTQGDKILDVPLAKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE L+ EID AVHS KD+PT L +GL++ A RED RD F+S +++ L + Sbjct: 59 VKEIEDALLRNEIDIAVHSLKDVPTVLPEGLELIAITEREDPRDAFLSIRYENIYQLPEN 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +VIGTSSLRRK+ +++ R D+ + D RG ++TR+ KL + AI+LAYAG+KRL + Sbjct: 119 TVIGTSSLRRKSQIMKIRKDLQIKDLRGNVDTRIRKLEEGQYDAIILAYAGLKRLGLDSK 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 +K I + ++ P+ QG + IE ++ + + L+K +NH +++ ER+FL L+G C Sbjct: 179 VKYIFSPDEMIPAVCQGFLAIEGRSDDERIKNLIKPLNHYESYLRATAERSFLKTLEGGC 238 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS-----RNGNRCDAINIGRDAAQYIRFI 299 + + + K ++ G + +GK +++ + + AI +G+ A+ + Sbjct: 239 QVPLGAYCEIKENSFIITGFIADLEGKEYYQEKMIEQIKENPQEQAIILGKTLAEKLLND 298 Query: 300 SNKNVF 305 K + Sbjct: 299 GGKQIL 304 >gi|226311390|ref|YP_002771284.1| porphobilinogen deaminase [Brevibacillus brevis NBRC 100599] gi|259647803|sp|C0ZAH1|HEM3_BREBN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226094338|dbj|BAH42780.1| porphobilinogen deaminase [Brevibacillus brevis NBRC 100599] Length = 309 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 109/300 (36%), Positives = 165/300 (55%), Gaps = 5/300 (1%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 ++GTR S LAL L P + + + TKGDRI + TL+++GGKGLF + Sbjct: 5 KVGTRRSKLALTQTNWVVDKLK--GFAPEADFELHEIVTKGDRILDVTLSKVGGKGLFVK 62 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE+ L E D AVHS KDMP +L GL I A R D RDV +S ++L +L ++ Sbjct: 63 EIEQSLFDKETDFAVHSLKDMPAELPDGLVIGAIPKRVDPRDVLLSKDGKTLDELPQGAL 122 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSSLRR + +L +R DI + RG I+TR+ KL AI+LA AG++R+ E I Sbjct: 123 VGTSSLRRSSQILAYRPDIQIESLRGNIDTRMRKLAEGNFDAIILAAAGLERVNFEGEIS 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + L +E P+ GQGA+ IE ++ + L+K + T +V+ ER+FL +L G C+ Sbjct: 183 QFLPVEISLPAVGQGALAIECRADDEETLALLKQFDDAPTRLAVSAERSFLHKLQGGCQV 242 Query: 247 AIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 I +A + + + G+V + DGK + + G D + +G A+ + +V Sbjct: 243 PIGAYATVGENNEITLTGMVGSPDGKQMFKNTATG--QDPLALGIQVAEALLAQGAGDVL 300 >gi|209526164|ref|ZP_03274695.1| porphobilinogen deaminase [Arthrospira maxima CS-328] gi|209493420|gb|EDZ93744.1| porphobilinogen deaminase [Arthrospira maxima CS-328] Length = 322 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 104/307 (33%), Positives = 158/307 (51%), Gaps = 5/307 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + RI +R S LAL + + L + P + +ST+GD+I + L +IG K Sbjct: 8 QTRTIRIASRKSQLALVQTYWVQEELQK--RFPDIKFEVHTMSTQGDKILDVALAKIGDK 65 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 GLFT+E+E +++ + D AVHS KD+PT L +GL + RED D + H + L Sbjct: 66 GLFTKELEVGMLNHDTDMAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVHENHRDKQL 125 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L +V+GTSSLRR A L + D RG + TRL KL+ + AI+LA AG+KR Sbjct: 126 DTLPPGAVVGTSSLRRLAQLRHNFPHLEFKDIRGNLNTRLQKLDEGQYDAIILAVAGLKR 185 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L I +++ E + GQGA+ +E + + E+VK + H T + ERAFL Sbjct: 186 LGMADRIHQVIPAEISLHAVGQGALGLECREGDTEIFEVVKALEHTVTAQRCHSERAFLR 245 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 EL+G C+ I +G L G+V + DGK + + G DA +G A ++ Sbjct: 246 ELEGGCQVPIGVNTMVEGDRLTLTGMVASLDGKRLIKDTVTGQASDAEQLGIQLAHKLKQ 305 Query: 299 ISNKNVF 305 + + Sbjct: 306 QGAEEIL 312 >gi|307942602|ref|ZP_07657950.1| porphobilinogen deaminase [Roseibium sp. TrichSKD4] gi|307774241|gb|EFO33454.1| porphobilinogen deaminase [Roseibium sp. TrichSKD4] Length = 307 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 142/305 (46%), Positives = 197/305 (64%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ RIGTR S LALA A ETR LM H +P I+ + T GD+I +R L+E+GG Sbjct: 1 MQSTLLRIGTRGSQLALAQAHETRDRLMAAHGLPEDAFEIVVVKTSGDQIQDRPLSEVGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE L+ G +D AVHS+KDMPT L GL I+A+LPRED+RD FIS A++L+D Sbjct: 61 KGLFTKEIEDMLLDGSLDLAVHSSKDMPTVLPAGLDITAFLPREDVRDAFISPKAKTLRD 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+G+SSLRR+A++ R R DI V+ +RG ++TRL KL+ A LLA+AG+KRL Sbjct: 121 LPHGAVVGSSSLRRQAMVKRLRPDIDVVMYRGNVQTRLRKLDEGVVDATLLAHAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V+ ++ +DF P+ GQGAIC+E+ +++ K L+ IN +T + ERAFL L Sbjct: 181 LGDVVTSVIEADDFVPAVGQGAICLESRLDDEKTNGLLSAINDPETRVRLEAERAFLGVL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DG+C++ I G A G TL G++L DG HEV +G+ DA IG A + ++ + Sbjct: 241 DGTCRTPIGGLATVDGDTLTLKGVILKPDGSQMHEVEHSGSVQDAEAIGLAAGEELKSKA 300 Query: 301 NKNVF 305 N Sbjct: 301 GPNFL 305 >gi|70733286|ref|YP_263060.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf-5] gi|123734674|sp|Q4K3X3|HEM3_PSEF5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|68347585|gb|AAY95191.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf-5] Length = 313 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L + H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLQEAH--PGLVVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ + D AVHS KD+P +GL + RED RD F+S+T SL + Sbjct: 59 KGLFVKELETALLENQADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPEGSVVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++H DT V ERA L Sbjct: 179 FEDRISSSISVDDSLPAGGQGAVGIECRSADIEIHALLAPLHHADTASRVTAERALNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G + G R A +G A + Sbjct: 239 NGGCQVPIACYAVLEGEQIWLRGLVGEPSGGLLLSAEARGPRASAAELGVQVADALLAQG 298 Query: 301 NKNVF 305 ++ Sbjct: 299 ADDIL 303 >gi|262370151|ref|ZP_06063478.1| porphobilinogen deaminase [Acinetobacter johnsonii SH046] gi|262315190|gb|EEY96230.1| porphobilinogen deaminase [Acinetobacter johnsonii SH046] Length = 306 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 112/302 (37%), Positives = 168/302 (55%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A R+ L +H + ++ T+GD+I + L +IGGKGL Sbjct: 2 KTLKIATRQSPLALWQAEHIRARLEALHA--GLTVELVTFVTQGDKILDTPLAKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S++ S L Sbjct: 60 FVKELEAALLDGRADLAVHSMKDVPMALPEGLSLAVICEREDPLDAFVSNSYVSFDALPQ 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK +L+ R D+ +ID RG + TRL+KL+ + AI+LA AG+KRL + Sbjct: 120 GAKVGTSSLRRKCQILKQRPDLDIIDLRGNVGTRLSKLDAGQYDAIILASAGLKRLGLAE 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + E P+ GQGA+ +E N+ +L+ + H DT V ERAF A L+G Sbjct: 180 RICHTIRPELSLPAVGQGALGLECRANDQAVLDLIHPLLHIDTDTCVRAERAFNAYLEGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IAG+A + + G V + DG+ + G+ +A ++G AQ + + Sbjct: 240 CQVPIAGYATLADNRIQLEGRVGSVDGQTLLKAQVAGDAAEAEHLGVVLAQELLAQGAGD 299 Query: 304 VF 305 + Sbjct: 300 LL 301 >gi|330890195|gb|EGH22856.1| porphobilinogen deaminase [Pseudomonas syringae pv. mori str. 301020] Length = 313 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL + Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HED V ER+ L Sbjct: 179 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDPAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G + + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPAGSVLLHAEARAPQTSAQALGVQVAEALLAQG 298 Query: 301 NKNVF 305 ++ Sbjct: 299 GADIL 303 >gi|330876446|gb|EGH10595.1| porphobilinogen deaminase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 313 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLEIRFLRGNVNTRLAKLDGGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G++ + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVQVAEALLAQG 298 Query: 301 NKNVF 305 + Sbjct: 299 AAEIL 303 >gi|77461708|ref|YP_351215.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf0-1] gi|123602840|sp|Q3K4T0|HEM3_PSEPF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|77385711|gb|ABA77224.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf0-1] Length = 313 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEAAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYSSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLTRRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSADTEIHALLAPLHHADTADRVTAERALNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V G R A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGEPSGGKLLNAQARAPRAAAETLGVQVAEDLLSQG 298 Query: 301 NKNVF 305 ++ Sbjct: 299 ADDIL 303 >gi|117924047|ref|YP_864664.1| hydroxymethylbilane synthase [Magnetococcus sp. MC-1] gi|117607803|gb|ABK43258.1| hydroxymethylbilane synthase [Magnetococcus sp. MC-1] Length = 314 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 112/307 (36%), Positives = 169/307 (55%), Gaps = 3/307 (0%) Query: 1 MEKKPF-RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M RIGTR S LA+ A +S L H P + + + TKGD+I + L ++G Sbjct: 1 MSDPQLVRIGTRGSALAVWQAEWVKSQLQAHH--PGIIVELELIKTKGDKILDVPLAKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E+ ++ G +D AVHS KD+P + GL + L RED RD +S QSL Sbjct: 59 GKGLFVKELEEAMLDGRVDLAVHSMKDVPAEFPDGLMLGPILKREDPRDALLSIHYQSLA 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L ++IG+SSLRR++ + R D+ + RG + TR+ KL + AI+LA AG+KRL Sbjct: 119 ELPQGALIGSSSLRRQSQIKAKRPDLRLDWLRGNVGTRIQKLVEGQFDAIILAAAGVKRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + + L E+ P+ GQGA+ IE V++ + L+ + H++T V ERAFLA+ Sbjct: 179 GLTEHVVQYLEPEEMLPAVGQGAVGIEHRVDDARIATLLAPLYHKETHSCVTAERAFLAK 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ IAG+A TL G+V +G + G R DA +G+ A + Sbjct: 239 LEGGCQVPIAGYATLHEDTLTLRGLVAEVEGGRVVQAQCQGPRADAYRMGQQLATQLLEA 298 Query: 300 SNKNVFN 306 + Sbjct: 299 GGGAILQ 305 >gi|269103733|ref|ZP_06156430.1| porphobilinogen deaminase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163631|gb|EEZ42127.1| porphobilinogen deaminase [Photobacterium damselae subsp. damselae CIP 102761] Length = 294 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 162/290 (55%), Gaps = 2/290 (0%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + A ++ L H P + ++P+ TKGD I + L ++GGKGLF +E+E ++ G Sbjct: 1 MWQAEFVKAELEKAH--PGLVVELVPMVTKGDVILDTPLAKVGGKGLFVKELEVAMLEGR 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 D AVHS KD+P + +GL + RED RD F+S+ SL++L S++GTSSLRR+ Sbjct: 59 ADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNRYNSLEELPQGSIVGTSSLRRQC 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 L R D+ V D RG + TRL KL++ + AI+LA AG+KRLK + I+ + E P Sbjct: 119 QLRSQRPDLIVKDLRGNVNTRLRKLDDGEYDAIILACAGLKRLKMDDRIRAAIAPETSLP 178 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + GQGA+ IE +++ + ++L+ +NH++T V CERA L G C+ I +A +G Sbjct: 179 AVGQGAVGIECRLDDTRVRDLLAALNHQETATRVLCERAMNNRLQGGCQVPIGSYAELQG 238 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 ++ +V DG +G+ DA +G A+ + K + Sbjct: 239 DQIWLRALVGEPDGSQIVRGEISGSANDAEALGTQLAEQLLADGAKPILE 288 >gi|39998374|ref|NP_954325.1| porphobilinogen deaminase [Geobacter sulfurreducens PCA] gi|55976461|sp|Q747I1|HEM3_GEOSL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|39985320|gb|AAR36675.1| porphobilinogen deaminase [Geobacter sulfurreducens PCA] gi|298507314|gb|ADI86037.1| hydroxymethylbilane synthase [Geobacter sulfurreducens KN400] Length = 318 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 169/305 (55%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR S LAL A +S L + P + ++ + T GD+I + L ++GG Sbjct: 1 MALNRLRIGTRASQLALWQANWVKSELEK--RYPGMEVELVKIKTIGDKILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD FIS+ + + Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLVCITEREDPRDAFISN-GVTFAN 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A LL+ R D+ ++ RG +ETR+ KL +K A++LA AG+KRL Sbjct: 118 LPQGAKIGTSALRRQAQLLKVRPDLEMVIIRGNVETRIRKLTEDKLDAVILAAAGLKRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V+ E L ++ P+ GQGA+ +E +++ +E + NH DT +V ERA L Sbjct: 178 FTDVVTEYLPVDLSLPAIGQGALGLECRLDDQAVRETIDFFNHPDTAHAVRAERALLWRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA G +L G + + DG + S +G D +G A+ + Sbjct: 238 EGGCQVPIAAHGQVSGDSLTLTGFIASVDGTRSVKESISGPVTDCEKLGIALAEKLLADG 297 Query: 301 NKNVF 305 + Sbjct: 298 GHEIL 302 >gi|326561756|gb|EGE12091.1| porphobilinogen deaminase [Moraxella catarrhalis 7169] Length = 321 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 110/313 (35%), Positives = 164/313 (52%), Gaps = 10/313 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNHFEHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L Sbjct: 179 LHKRIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292 +G C+ IAGFA + L G V + DGK + + A +G D Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQLGIDV 298 Query: 293 AQYIRFISNKNVF 305 A + ++ Sbjct: 299 AHELLMQGADDIL 311 >gi|149376990|ref|ZP_01894744.1| porphobilinogen deaminase [Marinobacter algicola DG893] gi|149358767|gb|EDM47237.1| porphobilinogen deaminase [Marinobacter algicola DG893] Length = 313 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 107/306 (34%), Positives = 168/306 (54%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K+ RI TR S LAL A +S L +H + ++ + T+GD+I + L +IGG Sbjct: 1 MSKRTLRIATRSSALALWQAEFIKSELERLHD--NVTVELVKIKTQGDKILDVPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ +++G D AVHS KD+P + +GL + A RED D F+S+ ++ Sbjct: 59 KGLFVKELEEAMLAGSADLAVHSMKDVPMEFPEGLGLVAICEREDPTDAFVSNDYDNVNA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT+SLRR+A L +R D+ + RG + TRL KL+ AI+LA +G+KRL Sbjct: 119 LPHGAVVGTASLRREAQLRAYRPDLEIRTLRGNVNTRLAKLDAGDYQAIVLASSGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ L P+ GQGA+ IE +++ + +++ ++H D+ D V ERA L Sbjct: 179 FHDRIRYCLPDSISLPAVGQGALGIECRLDDAELIAMLEPLDHRDSSDRVKAERALNRRL 238 Query: 241 DGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G C+ IA +A + L+ G+V A DG V R + +GR+ A+ + + Sbjct: 239 QGGCQVPIAAYALLEDNDMLWLRGLVGAVDGTQVFRVEGRAPRSEGERLGRELAEDLLAL 298 Query: 300 SNKNVF 305 V Sbjct: 299 GADKVL 304 >gi|269468208|gb|EEZ79901.1| porphobilinogen deaminase [uncultured SUP05 cluster bacterium] Length = 304 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 107/303 (35%), Positives = 169/303 (55%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +I TR SPLAL A ++ L H P NI ++ ++T+GD+I N L++IGGKG Sbjct: 2 NKTLKIATRKSPLALWQAEHVKTRLETHH--PDLNIELVKMTTQGDQILNSPLSKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E ++ G D AVHS KDMP ++ +G + A L RE+ D F+S+ ++ DL Sbjct: 60 LFIKELEVGMMEGVADIAVHSMKDMPYEIPQGFALGAILKRENPFDAFVSNHFDNIDDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GT S+RR L R D+ ++D RG + TRL KL++ + AI+LA AG+ RL E Sbjct: 120 QCAKVGTCSMRRIVQLKAIRPDLEILDLRGNVNTRLKKLDDGEYDAIILACAGLIRLGFE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 IK+ ++ E P+ GQGA+ IE N+ + +L+ + +T V+ ERA +L+G Sbjct: 180 DRIKQQISPEQSLPAVGQGAVGIEIRENDQEILDLITPLIDVETTHRVSAERAMNEKLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C IAGF+ + + G+V D + G+ A +G + A + + + Sbjct: 240 GCSVPIAGFSTIDNNQMTLTGLVGNVDTGTILKQQVCGDVAKAEALGVELADKLLSLGAR 299 Query: 303 NVF 305 +V Sbjct: 300 DVL 302 >gi|78224425|ref|YP_386172.1| porphobilinogen deaminase [Geobacter metallireducens GS-15] gi|123742774|sp|Q39QM7|HEM3_GEOMG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78195680|gb|ABB33447.1| Porphobilinogen deaminase [Geobacter metallireducens GS-15] Length = 318 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 163/305 (53%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A + L + P + ++ + T GD+I + L ++GG Sbjct: 1 MAPKQLRIGTRASQLALWQANWVKGELEK--RYPGMAVELVKIKTMGDKILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD IS D Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISR-GVKFAD 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A +L+ R D+ ++ RG +ETR+ KL + A++LA AG+ RL Sbjct: 118 LPQGARIGTSALRRQAQILKVRPDLQMVVIRGNVETRIRKLTDENLDAVILAAAGLNRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + E L +E P+ GQGA+ IE +++ ++ + NH DT +V ERA L Sbjct: 178 FADQVSEYLPVELSLPAIGQGALGIECRLDDETIKDTIAFFNHPDTAHAVRAERALLWRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA G TL G V + DG + + +G + +G A+ + Sbjct: 238 EGGCQVPIAAHGQVSGDTLTLTGFVASVDGTRSVKDTISGPVTECEKLGIALAEKLLADG 297 Query: 301 NKNVF 305 + Sbjct: 298 AHEIL 302 >gi|326562302|gb|EGE12628.1| porphobilinogen deaminase [Moraxella catarrhalis 103P14B1] gi|326563079|gb|EGE13352.1| porphobilinogen deaminase [Moraxella catarrhalis 12P80B1] gi|326571711|gb|EGE21724.1| porphobilinogen deaminase [Moraxella catarrhalis BC8] gi|326578075|gb|EGE27935.1| porphobilinogen deaminase [Moraxella catarrhalis O35E] Length = 321 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 109/313 (34%), Positives = 164/313 (52%), Gaps = 10/313 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNHFEHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL Sbjct: 119 LPTGAILGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L Sbjct: 179 LHKRIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292 +G C+ IAGFA + L G V + DGK + + A +G D Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQLGIDV 298 Query: 293 AQYIRFISNKNVF 305 A + ++ Sbjct: 299 AHELLMQGADDIL 311 >gi|17986460|ref|NP_539094.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M] gi|237816250|ref|ZP_04595243.1| porphobilinogen deaminase [Brucella abortus str. 2308 A] gi|17982057|gb|AAL51358.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M] gi|237788317|gb|EEP62532.1| porphobilinogen deaminase [Brucella abortus str. 2308 A] Length = 342 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 143/302 (47%), Positives = 197/302 (65%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLF Sbjct: 38 TLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLF 97 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 TEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL Sbjct: 98 TEEIEQALKDGRIDIAVHSTKDMPTALPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQG 157 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL V Sbjct: 158 ATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADV 217 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC Sbjct: 218 ITDVLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 277 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + Sbjct: 278 RTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHF 337 Query: 305 FN 306 F+ Sbjct: 338 FD 339 >gi|15966832|ref|NP_387185.1| porphobilinogen deaminase [Sinorhizobium meliloti 1021] gi|307301660|ref|ZP_07581419.1| porphobilinogen deaminase [Sinorhizobium meliloti BL225C] gi|307316316|ref|ZP_07595760.1| porphobilinogen deaminase [Sinorhizobium meliloti AK83] gi|23821697|sp|Q92LH7|HEM3_RHIME RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|15076104|emb|CAC47658.1| Probable porphobilinogen deaminase [Sinorhizobium meliloti 1021] gi|306898156|gb|EFN28898.1| porphobilinogen deaminase [Sinorhizobium meliloti AK83] gi|306903358|gb|EFN33947.1| porphobilinogen deaminase [Sinorhizobium meliloti BL225C] Length = 309 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 156/305 (51%), Positives = 214/305 (70%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLA+A ETR L H +PP I+ LSTKGDRIT+R+L EIGG Sbjct: 1 MQTKPFRIGTRGSPLAMAQTHETRDRLAAAHGLPPEMFEIVILSTKGDRITDRSLAEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E++L+SG++D AVHS+KDMPTKL +GL +SA+LPREDIRD F+ +A+ L D Sbjct: 61 KGLFTEELEQQLLSGDLDFAVHSSKDMPTKLPEGLFLSAFLPREDIRDAFVGRSAKRLVD 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R DI VI +RG++ETRL KL + LLAYAG++RL Sbjct: 121 LPQGATVGSSSLRRQALIRRLRPDIDVITYRGQVETRLRKLAEGQVDGTLLAYAGLRRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E V E+L+ E+FPP+P QGAIC+E + + + L+ I+ T ++V+CER FLA L Sbjct: 181 MEHVPTELLDPEEFPPAPAQGAICVEARIGDDRINTLLAAIDDPRTHEAVSCERGFLATL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG+A G+ + F G++L DG H++ +G DA +G++A + IR + Sbjct: 241 DGSCRTPIAGYAQSDGTHIRFAGMILTPDGTTSHQIEIDGRAADAERLGQEAGERIRAKA 300 Query: 301 NKNVF 305 F Sbjct: 301 GPGFF 305 >gi|282895464|ref|ZP_06303601.1| Porphobilinogen deaminase [Raphidiopsis brookii D9] gi|281199497|gb|EFA74360.1| Porphobilinogen deaminase [Raphidiopsis brookii D9] Length = 322 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 110/307 (35%), Positives = 161/307 (52%), Gaps = 5/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIG+R S LAL + + L + P + + +ST+GD+I + L +IG KG Sbjct: 8 SRTIRIGSRKSELALVQTYWVQEQLQKSY--PDIDFQVHTMSTQGDKILDVALAKIGDKG 65 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119 LFT+E+E +I+ EID AVHS KD+PT L GL ++A RE+ D + H Q+L Sbjct: 66 LFTKELELGMINQEIDFAVHSLKDLPTNLPAGLTLAAITARENPADAVVFHQNHLGQTLD 125 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L SVIGTSSLRR A L S + D RG + TR+ KL+ + A++LA AG++RL Sbjct: 126 TLPPGSVIGTSSLRRLAQLRHKFSHFTFKDVRGNLNTRMTKLDAGEYDALILAVAGLERL 185 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I +IL + + GQGA+ IE N+ + ++K I H T D ER+FL Sbjct: 186 NMHHRIHQILPPDISLHAVGQGALGIECRENDSELITILKAIEHPQTRDRCLAERSFLRS 245 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I G +L GIV + +G+ + + G DA +G A +R Sbjct: 246 LEGGCQVPIGVNTEIDGESLTLTGIVASVNGENLVKNTITGAAADAEKLGTQLANILREQ 305 Query: 300 SNKNVFN 306 + Sbjct: 306 GATEILE 312 >gi|237756363|ref|ZP_04584911.1| porphobilinogen deaminase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691477|gb|EEP60537.1| porphobilinogen deaminase [Sulfurihydrogenibium yellowstonense SS-5] Length = 310 Score = 384 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 106/306 (34%), Positives = 176/306 (57%), Gaps = 8/306 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL A L ++H + + ++ ++T+GD+I + L +IGGKGLF Sbjct: 2 KIRIGTRKSQLALWQANYIADRLREIHGV---EVELVKITTQGDKILDVPLAKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE L+ EID AVHS KD+PT L +GL++ A RED RD F+S + + L + Sbjct: 59 VKEIEDALLKNEIDIAVHSLKDVPTVLPEGLELIAITEREDPRDAFLSIKHEHIYQLPEN 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +VIGTSSLRRK+ +++ R D+ + D RG ++TR+ KL + AI+LAYAG+KRL + Sbjct: 119 AVIGTSSLRRKSQIMKIRKDLQIKDLRGNVDTRIRKLEEGQYDAIILAYAGLKRLGLDGK 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 +K I + ++ P+ QG + IE ++ + + L+K +NH +++ ER+FL L+G C Sbjct: 179 VKYIFSPDEMIPAVCQGFLAIEGRSDDERIKNLIKPLNHYESYLRATAERSFLKTLEGGC 238 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-----GNRCDAINIGRDAAQYIRFI 299 + + + K ++ G + +G+ +++ + AI +G+ A+ + Sbjct: 239 QVPLGAYCEIKENSFIITGFIADLEGREYYQEKITEQIKENTQEQAIILGKTLAEKLLND 298 Query: 300 SNKNVF 305 K + Sbjct: 299 GGKQIL 304 >gi|330965074|gb|EGH65334.1| porphobilinogen deaminase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 313 Score = 384 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLEIRFLRGNVNTRLAKLDGGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G++ + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVHVAEALLAQG 298 Query: 301 NKNVF 305 + Sbjct: 299 AAEIL 303 >gi|170719443|ref|YP_001747131.1| porphobilinogen deaminase [Pseudomonas putida W619] gi|229836111|sp|B1J1V2|HEM3_PSEPW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|169757446|gb|ACA70762.1| porphobilinogen deaminase [Pseudomonas putida W619] Length = 313 Score = 384 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNRFSSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L Sbjct: 179 FEERITASISVDDSLPAGGQGAVGIECRSADSEIHALLAPLHHTDTADRVVAERALNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V G R A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGEQLWLRGLVGQPSGGTLLMADARAPRASAETLGVQVAEDLLGQG 298 Query: 301 NKNVF 305 + Sbjct: 299 AAAIL 303 >gi|67924108|ref|ZP_00517554.1| Porphobilinogen deaminase [Crocosphaera watsonii WH 8501] gi|67854033|gb|EAM49346.1| Porphobilinogen deaminase [Crocosphaera watsonii WH 8501] Length = 318 Score = 384 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 104/307 (33%), Positives = 161/307 (52%), Gaps = 5/307 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RIG+R S LAL + + L + P + +ST+GD+I + L +IG K Sbjct: 4 SSRAIRIGSRKSQLALVQTYWIQEQLQKHY--PDRQFDVETMSTQGDKILDVALAKIGDK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 GLFT+E+E ++ ++D AVHS KD+PT L +GL + R + D + H + L Sbjct: 62 GLFTKELETAMLQNQVDFAVHSLKDLPTNLPEGLMLGCVTERVNPADALVVHEKHRDKQL 121 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L SVIGTSSLRR A L ++ D RG + TRL KL++ + AI+LA AG++R Sbjct: 122 DTLPEGSVIGTSSLRRLAQLRHHYPHLTFKDVRGNVNTRLGKLDSGEYDAIILAVAGLQR 181 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L I +++ + + GQGA+ IE +P+ EL+KV+ +T D ERAFL Sbjct: 182 LDMSDRIHQVIPDDISLHAVGQGALGIECRTGDPEILELLKVLEDTETRDRCYAERAFLR 241 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +L+G C+ I + + L G+V + DGK + + G A ++G+ A +R Sbjct: 242 QLEGGCQVPIGVNTKIENNVLTLIGMVASLDGKTLIKDTIEGEPSQAESLGQTLATRLRD 301 Query: 299 ISNKNVF 305 + Sbjct: 302 AGATEIL 308 >gi|326560715|gb|EGE11083.1| porphobilinogen deaminase [Moraxella catarrhalis 46P47B1] Length = 321 Score = 384 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 109/313 (34%), Positives = 164/313 (52%), Gaps = 10/313 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNRFEHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L Sbjct: 179 LHERIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292 +G C+ IAGFA + L G V + DGK + + A +G D Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQLGIDV 298 Query: 293 AQYIRFISNKNVF 305 A + ++ Sbjct: 299 AHELLMQGADDIL 311 >gi|113460193|ref|YP_718250.1| porphobilinogen deaminase [Haemophilus somnus 129PT] gi|170718229|ref|YP_001785251.1| porphobilinogen deaminase [Haemophilus somnus 2336] gi|123131907|sp|Q0I178|HEM3_HAES1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238058918|sp|B0UWZ8|HEM3_HAES2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|112822236|gb|ABI24325.1| hydroxymethylbilane synthase (porphobilinogen deaminase, PGB) [Haemophilus somnus 129PT] gi|168826358|gb|ACA31729.1| porphobilinogen deaminase [Haemophilus somnus 2336] Length = 321 Score = 384 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 110/318 (34%), Positives = 165/318 (51%), Gaps = 14/318 (4%) Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M K +I TR SPLAL A ++ L + ++ ++P+ TKGD I + L +IG Sbjct: 1 MSINKTLKIATRQSPLALWQANYVKNRLQQRYSH--LSVELVPIITKGDVILDTPLAKIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E L++GE D AVHS KD+P + KGL++S PRED RD F+S+ ++L Sbjct: 59 GKGLFVKELENALLNGEADIAVHSMKDVPMQFPKGLELSVICPREDPRDAFVSNKYRTLD 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +++GTSSLRR+ L WR+D+ + RG + TRLNKL+ AI+LA AG+ RL Sbjct: 119 ELPQGAIVGTSSLRRQCQLKNWRADLDIRSLRGNVGTRLNKLDQGDYDAIILASAGLIRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I+ + I+ P+ GQGA+ IE V++ Q L+ + + T V ERA Sbjct: 179 GLTERIRSFIEIDTILPACGQGAVGIECRVDDRDVQSLLMPLADQTTTYCVLAERAMNFH 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS-----------RNGNRCDAINI 288 L G C+ I +A + + LY G+V G A + Sbjct: 239 LQGGCQVPIGAYAILENNQLYLRGLVGDVHGSQILSAEGQFELSLDFESSQSAVQKAEEL 298 Query: 289 GRDAAQYIRFISNKNVFN 306 G A+ + + Sbjct: 299 GVSIAEQLLQQGADKILQ 316 >gi|192360982|ref|YP_001983840.1| porphobilinogen deaminase [Cellvibrio japonicus Ueda107] gi|190687147|gb|ACE84825.1| porphobilinogen deaminase [Cellvibrio japonicus Ueda107] Length = 315 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 110/300 (36%), Positives = 170/300 (56%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LAL A ++ L H P + ++PL+++GD+I + L ++GGKGLF Sbjct: 8 LRIATRKSLLALWQADYVKTELERHH--PGLRVELVPLTSRGDKILDVPLAKVGGKGLFV 65 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L++G D AVHS KD+P + GL ++ PRED RD F+S+ SL DL + Sbjct: 66 KELEQALLAGAADIAVHSMKDVPMEFPDGLGLAVICPREDARDAFVSNRFASLDDLPAGA 125 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ LL R D+ V RG ++TRL KL++ + AI+LA AG+ RL+ + I Sbjct: 126 VVGTSSLRRQCQLLARRPDLQVKFLRGNVQTRLQKLDDGEYDAIILAAAGLIRLELQARI 185 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ E P+ GQGA+ IE + + L++ ++H+ T + V ERA L G C+ Sbjct: 186 RSLIAPEVSLPAGGQGAVGIECRMQDQATLALLQPLHHQPTAEQVLAERAMNRRLQGGCQ 245 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IA +A +G L+ G+V A DG G + +G A+ + ++ Sbjct: 246 VPIACYALQQGGELWLRGLVGAPDGSQMLFDEIRGPVAEGEQMGIQLAERLLAAGADSIL 305 >gi|307154737|ref|YP_003890121.1| porphobilinogen deaminase [Cyanothece sp. PCC 7822] gi|306984965|gb|ADN16846.1| porphobilinogen deaminase [Cyanothece sp. PCC 7822] Length = 320 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 162/306 (52%), Gaps = 5/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIG+R S LAL + + L + P + +ST+GD+I + L +IG KG Sbjct: 7 TRTVRIGSRKSQLALVQTYWVQGELQKHY--PDRQFDVETMSTQGDKILDVALAKIGDKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSLK 119 LFT+E+E +I +ID AVHS KD+PT L GL + R D D + H + L Sbjct: 65 LFTKELEVGMIDHQIDLAVHSLKDLPTNLPSGLILGCVTERVDPADGLVVNEKHKDKQLD 124 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +VIGTSSLRR A L ++ D RG + TRL+KL+ + AI+LA AG+ RL Sbjct: 125 TLPEGAVIGTSSLRRLAQLRHHFPHLTFKDVRGNVNTRLSKLDAGEYDAIILAVAGLTRL 184 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I +I+ E + GQGA+ IE ++ + +L+KV+ H+ T D ERAFL E Sbjct: 185 GMSDRIHQIIPSEISLHAVGQGALGIECRADDVEVLDLLKVLEHQATRDRCYAERAFLRE 244 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I +G TL G+V + DG+ + S G DA +G++ A +R Sbjct: 245 LEGGCQVPIGVNTSVEGDTLTLTGMVASLDGQKLIKDSITGKASDADQLGQELAIRMRNA 304 Query: 300 SNKNVF 305 + Sbjct: 305 GAGEIL 310 >gi|326569020|gb|EGE19089.1| porphobilinogen deaminase [Moraxella catarrhalis BC1] Length = 321 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 109/313 (34%), Positives = 164/313 (52%), Gaps = 10/313 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNHFEHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL Sbjct: 119 LPTGAILGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L Sbjct: 179 LHKRIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292 +G C+ IAGFA + L G V + DGK + + A +G D Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSRKLMGEIQLDEQAAEQLGIDV 298 Query: 293 AQYIRFISNKNVF 305 A + ++ Sbjct: 299 AHELLMQGADDIL 311 >gi|225628089|ref|ZP_03786124.1| porphobilinogen deaminase [Brucella ceti str. Cudo] gi|225616914|gb|EEH13961.1| porphobilinogen deaminase [Brucella ceti str. Cudo] Length = 342 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 143/302 (47%), Positives = 197/302 (65%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLF Sbjct: 38 TLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLF 97 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 TEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL Sbjct: 98 TEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQG 157 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL V Sbjct: 158 ATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADV 217 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC Sbjct: 218 ITDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 277 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + Sbjct: 278 RTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHF 337 Query: 305 FN 306 F+ Sbjct: 338 FD 339 >gi|326574375|gb|EGE24318.1| porphobilinogen deaminase [Moraxella catarrhalis CO72] gi|326575506|gb|EGE25431.1| porphobilinogen deaminase [Moraxella catarrhalis 101P30B1] Length = 321 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 110/313 (35%), Positives = 164/313 (52%), Gaps = 10/313 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNRFEHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L Sbjct: 179 LHKRIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292 +G C+ IAGFA + L G V + DGK + + A +G D Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQLGIDV 298 Query: 293 AQYIRFISNKNVF 305 A + ++ Sbjct: 299 AHELLMQGADDIL 311 >gi|121535332|ref|ZP_01667145.1| porphobilinogen deaminase [Thermosinus carboxydivorans Nor1] gi|121306118|gb|EAX47047.1| porphobilinogen deaminase [Thermosinus carboxydivorans Nor1] Length = 317 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 117/303 (38%), Positives = 167/303 (55%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K IGTR S LAL A L H P + I + T GD+I + L +IGGKG Sbjct: 2 KNKLVIGTRGSKLALWQANYIAHRLCQYH--PGLEVTIKHIVTTGDKILDVPLAKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT+EIE ++ GEID AVHS KDMPT+L GL ++A RE+ D IS +L L Sbjct: 60 VFTKEIELAMLRGEIDLAVHSLKDMPTELPPGLTLAAITEREEPFDALISPKYGTLDKLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR+A LL R D++V D RG ++TRL KL + AI+LA AG+KRL + Sbjct: 120 HGAKVGTSSLRRRAQLLNCRPDLTVCDLRGNVDTRLRKLETEELDAIVLAQAGLKRLGWD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + L + P+ GQGA+ +ET ++ + LV ++ EDT +V ER+FL EL+G Sbjct: 180 DRITQQLPPDICLPAVGQGALALETRSDDSEVLALVAFLHDEDTAAAVTAERSFLNELEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I + + L +L+ DG + G A ++GR AQ++ + Sbjct: 240 GCQVPIGVYGRVENGELVLDAAILSLDGAAALKDRICGAPAAAEDLGRKLAQHMYVTGGR 299 Query: 303 NVF 305 + Sbjct: 300 EIL 302 >gi|28867368|ref|NP_789987.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato str. DC3000] gi|38257983|sp|Q88B91|HEM3_PSESM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|28850602|gb|AAO53682.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato str. DC3000] Length = 313 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + +AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYNAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G++ + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVQVAEALLAQG 298 Query: 301 NKNVF 305 + Sbjct: 299 AAEIL 303 >gi|227823724|ref|YP_002827697.1| porphobilinogen deaminase [Sinorhizobium fredii NGR234] gi|227342726|gb|ACP26944.1| porphobilinogen deaminase [Sinorhizobium fredii NGR234] Length = 309 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 157/305 (51%), Positives = 208/305 (68%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA ETR L H +PP ++ LSTKGDRIT+R L EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQTHETRDRLAAAHGLPPEMFEVVVLSTKGDRITDRPLAEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E++L+SG++D AVHS+KDMPTKL GL +SA+LPREDIRD F+ TA L + Sbjct: 61 KGLFTEELEQQLLSGDLDFAVHSSKDMPTKLPDGLFLSAFLPREDIRDAFVGRTAPRLVE 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R DI+VI +RG++ETRL KL + LLA+AG+KRL Sbjct: 121 LPEGATVGSSSLRRQALIRRLRPDINVITYRGQVETRLRKLAEGQVDGTLLAFAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V E+L+ ++FPP+P QGAICIE+ + + L+ I+ T ++V CER FLA L Sbjct: 181 MTDVPTELLDPKEFPPAPAQGAICIESRDGDDRVNALLAAIDDPRTHEAVACERGFLATL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG+A G+ + F G++L DG H V +G DA +GR A + IR + Sbjct: 241 DGSCRTPIAGYAQSDGTYIRFSGMILTPDGATSHRVEIDGKAQDATELGRKAGEQIRDKA 300 Query: 301 NKNVF 305 F Sbjct: 301 GPGFF 305 >gi|78778881|ref|YP_396993.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9312] gi|123741491|sp|Q31C38|HEM3_PROM9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78712380|gb|ABB49557.1| hydroxymethylbilane synthase [Prochlorococcus marinus str. MIT 9312] Length = 316 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 103/308 (33%), Positives = 161/308 (52%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +I +R S LA+ + L IP + I ++T+GD+I + L +IG Sbjct: 1 MTNFKLKIASRRSKLAMVQTLWVKDQLEK--NIPNLEVSIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQS 117 KGLFT+E+E +++ G+ D AVHS KD+PT L GL++ RED D + + Sbjct: 59 KGLFTKELEAQMLVGQADIAVHSLKDLPTNLPSGLKLGCITKREDPADALVVSKKNDCYK 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L S++GTSSLRR A L ++ D RG + TR+ KL+ + I+LA AG+K Sbjct: 119 LETLPAGSIVGTSSLRRLAQLRNKYPHLNFKDIRGNVITRIEKLDAGEFDCIILAAAGLK 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL E I +I+ E + GQGA+ IE ++ K E++ V+ + T ERAFL Sbjct: 179 RLGFESRIHQIIPNEISLHAVGQGALGIECKSDDKKVLEIISVLEDKPTSQRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + + LY G+V + DG+ + GN D +G++ A+ ++ Sbjct: 239 RELEGGCQVPIGVNSSIQNEQLYLTGMVASLDGERLIKDQYIGNIDDPEQVGKELAKKLK 298 Query: 298 FISNKNVF 305 + Sbjct: 299 LQGADKIL 306 >gi|326571836|gb|EGE21842.1| porphobilinogen deaminase [Moraxella catarrhalis BC7] Length = 321 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 108/313 (34%), Positives = 164/313 (52%), Gaps = 10/313 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNRFEHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + A++LA +G++RL Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAVILATSGLERLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L Sbjct: 179 LHERIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292 +G C+ IAGFA + L G V + DGK + + A +G D Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQLGIDV 298 Query: 293 AQYIRFISNKNVF 305 A + ++ Sbjct: 299 AHELLMQGADDIL 311 >gi|284929513|ref|YP_003422035.1| hydroxymethylbilane synthase [cyanobacterium UCYN-A] gi|284809957|gb|ADB95654.1| hydroxymethylbilane synthase [cyanobacterium UCYN-A] Length = 318 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 105/308 (34%), Positives = 160/308 (51%), Gaps = 5/308 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RIG+R S LAL + + L + P + I +ST+GD I + L +IG K Sbjct: 4 SNRLIRIGSRKSQLALVQTYWIQEQLQKHY--PNYEFQIETMSTQGDNILDVALAKIGDK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 GLFT+E+E ++ ID AVHS KD+PT L +GL + RE+ D + + L Sbjct: 62 GLFTKELEVAMLQNRIDFAVHSLKDLPTNLPEGLMLGCITERENPADALVVNEKYKNNKL 121 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L S+IGTSSLRR A L + D RG + TRL KL+ + AI+LA AG+KR Sbjct: 122 DTLPEGSIIGTSSLRRLAQLRHHYPYLIFKDVRGNVNTRLAKLDAGEYDAIILAAAGLKR 181 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + I +I+ + + GQGA+ IE + + EL++V+ H +T ER+FL Sbjct: 182 LNMDNRIHQIIPEDISLHAVGQGALGIECRAADSRILELLEVLKHSETHYRCMGERSFLR 241 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+G C+ I + + L GIV + DGK + + +G+ A N+G + + +R Sbjct: 242 ALEGGCQVPIGVTTKIECNILTLTGIVASLDGKTMLKNTVSGHMEQAENLGYELSVCLRD 301 Query: 299 ISNKNVFN 306 + + Sbjct: 302 AGATEILD 309 >gi|304414148|ref|ZP_07395516.1| porphobilinogen deaminase [Candidatus Regiella insecticola LSR1] gi|304283362|gb|EFL91758.1| porphobilinogen deaminase [Candidatus Regiella insecticola LSR1] Length = 312 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 159/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K RI TR SPLAL A R SL H P + ++P++T+GD + + L +IGG Sbjct: 1 MSEKVIRIATRQSPLALWQADYVRKSLESHH--PDLQVKLVPITTRGDTLLHTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ D AVHS KD+P GL + R D D F+S + LK Sbjct: 59 KGLFVKELEQALLENCADIAVHSIKDVPIHFPAGLGLVVICQRGDPHDAFVSKNYKHLKQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ + + + V D RG + TRLNKL+ AI+LA AG++RL Sbjct: 119 LPPGSIVGTSSLRRQCQIRKKYPHLIVRDLRGNVGTRLNKLDQGAYQAIILAVAGLQRLD 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ +++ E+ P+ GQGAI IE + + ++L+ +NH T + ERA L Sbjct: 179 LQSRIQHVMSPEESLPAAGQGAIGIECRLEDDVTRQLLAPLNHFPTERRICAERALNIRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G L V DG R G A IG D A + Sbjct: 239 EGGCQVPIGSYAELEGDNLRLRAFVSTPDGSQMIYGERCGLAIQAEKIGLDLATELIAEG 298 Query: 301 NKNVF 305 + Sbjct: 299 ADKIL 303 >gi|213971710|ref|ZP_03399816.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato T1] gi|301386723|ref|ZP_07235141.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato Max13] gi|302062167|ref|ZP_07253708.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato K40] gi|302130377|ref|ZP_07256367.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213923528|gb|EEB57117.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato T1] Length = 313 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL Sbjct: 59 KGLFVKELETALLEDSADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + +AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYNAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G++ + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVQVAEALLAQG 298 Query: 301 NKNVF 305 + Sbjct: 299 AAEIL 303 >gi|296112247|ref|YP_003626185.1| porphobilinogen deaminase [Moraxella catarrhalis RH4] gi|295919941|gb|ADG60292.1| porphobilinogen deaminase [Moraxella catarrhalis RH4] Length = 321 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 109/313 (34%), Positives = 164/313 (52%), Gaps = 10/313 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNRFEHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L Sbjct: 179 LHERIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292 +G C+ IAGFA + L G V + DGK + + A +G D Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSRKLMGEIQLDEQAAEQLGIDV 298 Query: 293 AQYIRFISNKNVF 305 A + ++ Sbjct: 299 AHELLMQGADDIL 311 >gi|126666605|ref|ZP_01737583.1| porphobilinogen deaminase [Marinobacter sp. ELB17] gi|126628993|gb|EAZ99612.1| porphobilinogen deaminase [Marinobacter sp. ELB17] Length = 313 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 108/306 (35%), Positives = 169/306 (55%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L +H + ++ + T GD+I + L ++GG Sbjct: 1 MSARNLRIATRSSALALWQAEFIKAELERLHS--NVTVELVKIKTLGDKILDVPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P +GL + A R+D D FIS+ SL D Sbjct: 59 KGLFVKELEEAMLDGRADLAVHSMKDVPMAFPEGLGLVAICERDDPTDAFISNHFSSLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L++V+GTSSLRR++ L R D+ + RG + TRL KL+ AI+LA +G+KRL Sbjct: 119 LPLNAVVGTSSLRRESQLRANRPDLQIRVLRGNVNTRLAKLDAGNYDAIILASSGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + P+ GQGA+ IE +++ + + +++ +NH D+ D V ERA L Sbjct: 179 FEARIRNCMPDTLSLPAVGQGALGIECRLDDQELRAMLEPLNHTDSADRVKAERALNTRL 238 Query: 241 DGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ IA +A + L+ G+V A DG + +R + +GR+ A+ + Sbjct: 239 NGGCQVPIAAYALLEDNDMLWLRGLVGAVDGSLIFRAEGRVHRSEGERLGRELAEDLLAQ 298 Query: 300 SNKNVF 305 V Sbjct: 299 GADKVL 304 >gi|148262442|ref|YP_001229148.1| porphobilinogen deaminase [Geobacter uraniireducens Rf4] gi|189028092|sp|A5GCW2|HEM3_GEOUR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|146395942|gb|ABQ24575.1| porphobilinogen deaminase [Geobacter uraniireducens Rf4] Length = 318 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 165/305 (54%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A +S L + P + ++ + T GD+I + L ++GG Sbjct: 1 MALKTLRIGTRASQLALWQANWVKSELEK--RYPGLEVSLLKIKTIGDKILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ G+ID AVHS KD+PT+ +GL + RED RD IS D Sbjct: 59 KGLFVKEIEEAMLRGDIDIAVHSMKDVPTEFPEGLGLHCITEREDPRDAVISR-GIKFAD 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A LL+ R D+ ++ RG +ETR+NKL A++LA AG+KRL Sbjct: 118 LPKGAKIGTSALRRQAQLLKIRPDMEMVIIRGNVETRINKLEAENLDAVILAAAGLKRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + E L + P+ GQGA+ IE ++N + + + NH T +V ERA L Sbjct: 178 FTDKVAEYLPTDLSIPAIGQGALGIECRLDNEEVKSAIDFFNHPATAYAVRAERALLWRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA F +G L G + + DGK + S +G + +G A+ + Sbjct: 238 EGGCQVPIAAFGEVEGDQLKLTGFIASVDGKTSVKGSVSGPAEECEKLGITLAEQLLKDG 297 Query: 301 NKNVF 305 + Sbjct: 298 GHEIL 302 >gi|15605804|ref|NP_213181.1| porphobilinogen deaminase [Aquifex aeolicus VF5] gi|2982966|gb|AAC06580.1| porphobilinogen deaminase [Aquifex aeolicus VF5] Length = 323 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 114/301 (37%), Positives = 171/301 (56%), Gaps = 5/301 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL A + L + ++ ++T GD+IT+ L +IGGKGLF Sbjct: 21 KIRIGTRKSKLALWQANYVKDFLEKH---WGVEVELVKITTTGDKITDVPLAKIGGKGLF 77 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIEK L+ G ID AVHS KD+P + KGL++ A RE+ DV IS + + L +L Sbjct: 78 VKEIEKALLEGSIDLAVHSLKDVPMVIPKGLKLGAITKRENPYDVLISRSGKKLYELPSG 137 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SVIGTSSLRR+ + + R D+ V RG ++TR+ KL A++LAYAG+KR+ E Sbjct: 138 SVIGTSSLRRQVQIKKRRRDLKVEVLRGNVDTRMRKLKEGLYDAVILAYAGVKRMGYESE 197 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E+L EDF P+ GQG++ IE + + +EL+K +N+E+++ ER FL L+G C Sbjct: 198 ITEVL--EDFIPAVGQGSLAIEIREGDKRIEELIKPLNNEESFLCAIAERTFLRRLEGGC 255 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + + FA + TL + + + + E R GN +A +G A+ + + + Sbjct: 256 QVPVGAFAKIENGTLKMKAFISDIEAERYIEGYREGNPEEAEKLGLSLAEELLKKGGEEI 315 Query: 305 F 305 Sbjct: 316 L 316 >gi|303230554|ref|ZP_07317308.1| hydroxymethylbilane synthase [Veillonella atypica ACS-049-V-Sch6] gi|302514795|gb|EFL56783.1| hydroxymethylbilane synthase [Veillonella atypica ACS-049-V-Sch6] Length = 312 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 107/304 (35%), Positives = 171/304 (56%), Gaps = 2/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIGTR S LAL + +S L ++ P + ++ +TKGDRI N+ L E+GGKG Sbjct: 2 RNHIRIGTRKSALALWQSEYVKSELQRLY--PGVTVELVHFNTKGDRILNKPLAEVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT E+E + +G+ID AVHS KDMPT+L GL + A RE D +S ++L L Sbjct: 60 LFTAELEAAMHAGDIDIAVHSLKDMPTELPDGLTLGAISKREVPFDALVSPKYKTLDQLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IGTSSLRR+A LL R D+ + RG ++TRL K+ ++LA AG+KRL + Sbjct: 120 EGARIGTSSLRRQAQLLHRRPDLQIEVIRGNVQTRLGKIETEGLDGVVLAQAGLKRLGLD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I ++ ++ P+ GQGA+ IE ++ + E++ I+ E T +V ER+FL +L+G Sbjct: 180 DRITQVFTADEMIPAVGQGALAIECRSDDTEMLEILSKIDDEPTRLAVEGERSFLNQLNG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ + + + L ++ + DGK +E +G + +G++ A+ + K Sbjct: 240 GCQVPMGVYGTVEKGQLNLKALIASLDGKTVYEGELSGPAKKGVMLGKNLAKALYEEGGK 299 Query: 303 NVFN 306 ++ Sbjct: 300 HIVE 303 >gi|303229236|ref|ZP_07316032.1| hydroxymethylbilane synthase [Veillonella atypica ACS-134-V-Col7a] gi|302516091|gb|EFL58037.1| hydroxymethylbilane synthase [Veillonella atypica ACS-134-V-Col7a] Length = 312 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 106/304 (34%), Positives = 171/304 (56%), Gaps = 2/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIGTR S LAL + +S L ++ P + ++ +TKGDRI ++ L E+GGKG Sbjct: 2 RNHIRIGTRKSALALWQSEYVKSELQRLY--PGITVELVHFNTKGDRILDKPLAEVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT E+E + +G+ID AVHS KDMPT+L GL + A RE D +S ++L L Sbjct: 60 LFTAELEAAMHAGDIDIAVHSLKDMPTELPDGLTLGAISKREVPFDALVSPKYKTLDQLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IGTSSLRR+A LL R D+ + RG ++TRL K+ ++LA AG+KRL + Sbjct: 120 EGARIGTSSLRRQAQLLHRRPDLQIEVIRGNVQTRLGKIETEGLDGVVLAQAGLKRLGLD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I ++ ++ P+ GQGA+ IE ++ + E++ I+ E T +V ER+FL +L+G Sbjct: 180 DRITQVFTADEMIPAVGQGALAIECRSDDTEMLEILSKIDDEPTRLAVEGERSFLNQLNG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ + + + L ++ + DGK +E +G + +G++ A+ + K Sbjct: 240 GCQVPMGVYGTVEKGQLILKALIASLDGKTVYEGELSGPAKKGVMLGKNLAKALYEEGGK 299 Query: 303 NVFN 306 ++ Sbjct: 300 HIVE 303 >gi|292493894|ref|YP_003529333.1| porphobilinogen deaminase [Nitrosococcus halophilus Nc4] gi|291582489|gb|ADE16946.1| porphobilinogen deaminase [Nitrosococcus halophilus Nc4] Length = 310 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 116/306 (37%), Positives = 163/306 (53%), Gaps = 3/306 (0%) Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M K RI TR S LAL A +L H P ++ ++ +ST+GD+I + L ++G Sbjct: 1 MSAKTCLRIATRKSLLALWQAEYVADTLR--HHHPGLSVELVRMSTQGDKILDTPLAKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E+ L+SGE D AVHS KD+P L + L IS RED RD F+S+ Q L Sbjct: 59 GKGLFVKELEQGLLSGEADIAVHSMKDVPVVLPEDLHISVICEREDPRDAFVSNHWQQLD 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + +GTSSLRR++ + R D V+D RG + TRL KL+NN+ I+LA +G+KRL Sbjct: 119 SLPEGARVGTSSLRRQSQVRERRPDFHVLDLRGNVNTRLAKLDNNEFDGIVLAASGLKRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I E+L E P+ GQGAI IE + +EL+KV+ H T ++ ERA Sbjct: 179 GLTDRITELLAPEVSLPAIGQGAIGIECRKGDTATEELLKVLEHTPTRTTIRAERALNER 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L G C+ IA +A G L +V DG G +A +G + + Sbjct: 239 LAGGCQVPIAAYAELDGERLRLRALVGQPDGGKVIRGEMWGTPEEAEVLGVSLGEDLLRR 298 Query: 300 SNKNVF 305 + Sbjct: 299 GADKIL 304 >gi|123968087|ref|YP_001008945.1| porphobilinogen deaminase [Prochlorococcus marinus str. AS9601] gi|158513952|sp|A2BPX7|HEM3_PROMS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123198197|gb|ABM69838.1| Porphobilinogen deaminase [Prochlorococcus marinus str. AS9601] Length = 316 Score = 382 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 100/308 (32%), Positives = 160/308 (51%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +I +R S LA+ + L IP + I ++T+GD+I + L +IG Sbjct: 1 MTNFKLKIASRRSKLAMVQTLWVKDQLEK--NIPNLEVSIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117 KGLFT+E+E +++ G D AVHS KD+PT L GL++ RED D + + Sbjct: 59 KGLFTKELEAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVNKKNDCYK 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L++L S++GTSSLRR A L + D RG + TR+ KL+ + I+LA AG+K Sbjct: 119 LENLPEGSIVGTSSLRRLAQLRNKYPHLVFKDIRGNVITRIEKLDAGEFDCIILAAAGLK 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL E I +I+ E + GQGA+ IE ++ K E++ ++ + T ERAFL Sbjct: 179 RLGFESRIHQIIPSEVSLHAVGQGALGIECKSDDKKVLEIISILEDKPTCQRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + + L G+V + DG+ + G+ D +G++ A+ ++ Sbjct: 239 RELEGGCQVPIGVNSKIQNEQLCLTGMVASLDGERLIKDQYIGDINDPEEVGKELAKKLK 298 Query: 298 FISNKNVF 305 + + Sbjct: 299 QQGAEEIL 306 >gi|78044433|ref|YP_360051.1| porphobilinogen deaminase [Carboxydothermus hydrogenoformans Z-2901] gi|123756773|sp|Q3ACT3|HEM3_CARHZ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|77996548|gb|ABB15447.1| porphobilinogen deaminase [Carboxydothermus hydrogenoformans Z-2901] Length = 311 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 114/304 (37%), Positives = 169/304 (55%), Gaps = 2/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK +G+R S LAL L +H P N I+ + TKGD+I + L +IG KG Sbjct: 2 KKEVIVGSRDSALALWQTNWVVERLSKIH--PEINFKIVTMKTKGDKILDVALAKIGDKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E L++ ID AVHS KD+PT L +GL+I A+ RE DVFIS +L Sbjct: 60 LFTKELEHALLNKTIDMAVHSMKDLPTVLPEGLKIGAFCEREYPGDVFISPKGFKFLELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IGTSSLRR A +L R D+ I RG + TR K+ I+LAYAG+KRL E Sbjct: 120 QGARIGTSSLRRIAQILAVRPDLQAIPLRGNLPTRFRKMEEMDLDGIILAYAGVKRLGYE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E+L+ + P+ GQG+I +E ++ +EL+K I+H T ++ ERAFL L+G Sbjct: 180 DKITEMLSFDLCLPAVGQGSIGVEIRADDTFIEELLKPIDHFATNRAIRAERAFLKRLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I ++ K + L+ G+V + DGK+ + + G+ + +G A+ + + Sbjct: 240 GCQIPIGAYSEVKENRLHLKGVVASLDGKLVIKGEKEGSIEEPEKVGISLAEELLTKGAQ 299 Query: 303 NVFN 306 + Sbjct: 300 KILE 303 >gi|257453642|ref|ZP_05618932.1| porphobilinogen deaminase [Enhydrobacter aerosaccus SK60] gi|257449100|gb|EEV24053.1| porphobilinogen deaminase [Enhydrobacter aerosaccus SK60] Length = 319 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 107/309 (34%), Positives = 162/309 (52%), Gaps = 10/309 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR SPLAL A ++ L ++ P + ++P+ T+GD+I + L +IGGKGLF Sbjct: 6 TLNIATRQSPLALWQAEHIQARLQALY--PSLTVNLVPMVTQGDKILDTPLAKIGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E+ L D AVHS KD+P L +GL + AY RE D FIS+ +SL L Sbjct: 64 VKELEQALYEKRADIAVHSLKDVPMVLPEGLTLGAYCEREQPTDAFISNHYESLDALPQG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+ + ++R D+ +I RG + TRL+KL+ + AI+LA +G+ RL Sbjct: 124 AKLGTSSLRRQCQIQQYRPDLEIISLRGNVGTRLSKLDAGEYDAIILATSGLTRLGLTDR 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ L+ P+ GQGA+ IE ++ L+K +N E + V ERA L G C Sbjct: 184 IRHELDTHISLPAVGQGALAIECRSDDADVLALLKPLNDEPSRLCVMAERAMNRHLQGGC 243 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD--------AINIGRDAAQYI 296 + IAGFA + ++ G V + DGK + + D A +G A+ + Sbjct: 244 QVPIAGFATIQDGQIHLQGRVGSVDGKTLLKAEHHNALVDDARESQQIAEAVGVVVAEAL 303 Query: 297 RFISNKNVF 305 + Sbjct: 304 IAQGADKIL 312 >gi|332706560|ref|ZP_08426621.1| hydroxymethylbilane synthase [Lyngbya majuscula 3L] gi|332354444|gb|EGJ33923.1| hydroxymethylbilane synthase [Lyngbya majuscula 3L] Length = 322 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 160/305 (52%), Gaps = 5/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + + L P + +ST GD+I + L++IG KGL Sbjct: 10 RTIRIGSRKSQLALIQTYWVQEQLKK--HFPDREFEVQTMSTHGDKILDVALSKIGDKGL 67 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKD 120 FT+E+E ++ EID AVHS KD+PT+L +GL + RE+ D + H + ++ Sbjct: 68 FTKELELGMLRDEIDFAVHSLKDLPTRLPEGLVLGCVTERENPADALVMHQKHLDKQIET 127 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S+IGTSSLRR A L +S D RG + TRL KL+ A++LA AG+KRL Sbjct: 128 LPEGSIIGTSSLRRLAQLRYHFPHLSFKDVRGNLNTRLAKLDAGDYDALILAVAGLKRLD 187 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +IL E + GQGA+ IE ++ + EL+ I H T ER+ L L Sbjct: 188 MSDRIHQILPPEISLHAVGQGALGIECREDDQEVLELLNAIAHPPTAQRCYAERSLLRAL 247 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +G+TL IV + DG+ + + G + A N+G + A+ ++ Sbjct: 248 EGGCQVPIGVDTQLEGNTLTLTAIVASVDGQKLVKDTIQGEQSQAENLGLELAEQLKKQG 307 Query: 301 NKNVF 305 + + Sbjct: 308 AQEIL 312 >gi|254435152|ref|ZP_05048659.1| porphobilinogen deaminase [Nitrosococcus oceani AFC27] gi|207088263|gb|EDZ65535.1| porphobilinogen deaminase [Nitrosococcus oceani AFC27] Length = 314 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 120/306 (39%), Positives = 167/306 (54%), Gaps = 3/306 (0%) Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M K RI TR S LAL A +L H P NI ++ +ST+GD+I + L +IG Sbjct: 5 MSAKTCLRIATRKSLLALWQAEYVADTLR--HHYPDLNIELVRMSTQGDKILDTPLAKIG 62 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E+ L SGE D AVHS KD+P L + L I+ R D RD F+S+ Q L Sbjct: 63 GKGLFIKELEQGLFSGEADIAVHSMKDVPVDLPENLHIAVICQRGDPRDAFVSNHWQDLD 122 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + +GTSSLRR++ + R D V+D RG + TRL KL+NN+ AI+LA AG+KRL Sbjct: 123 SLPEGARVGTSSLRRQSQVRERRPDFQVLDLRGNVNTRLAKLDNNEFDAIILAAAGLKRL 182 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + I+E L E P+ GQGAI IE + +EL+KV+ H T ++ ERA A Sbjct: 183 ELTQRIRESLAPEVSLPAIGQGAIGIECRKGDTATEELIKVLEHPPTRITIRAERALNAR 242 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L G C+ IAG+A + L +V DG G +A ++G + + Sbjct: 243 LAGGCQVPIAGYAELEDERLRLRALVGQPDGGRVIRGETWGMPGEAESLGASLGEDLLRR 302 Query: 300 SNKNVF 305 + Sbjct: 303 GADKIL 308 >gi|298493147|ref|YP_003723324.1| porphobilinogen deaminase ['Nostoc azollae' 0708] gi|298235065|gb|ADI66201.1| porphobilinogen deaminase ['Nostoc azollae' 0708] Length = 322 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 106/306 (34%), Positives = 159/306 (51%), Gaps = 5/306 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P RIG+R S LAL + + L P + +ST+GD+I + L +IG KGL Sbjct: 9 RPIRIGSRKSQLALVQTYWVQEQLQK--SFPNITFEVHTMSTQGDKILDVALAKIGDKGL 66 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS---LKD 120 FT+E+E ++I+ EID AVHS KD+PT L +GL ++A RE+ D + H ++ Sbjct: 67 FTKELELRMINKEIDFAVHSLKDLPTNLPEGLTLAAITERENPADAVVLHKKHKDQQIET 126 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSSLRR A L + D RG + TR+ KL+ + A++LA AG++RL Sbjct: 127 LPAGAVIGTSSLRRLAQLRYKFPHFTFKDVRGNLITRIGKLDAGEYDALILAVAGLERLD 186 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +IL + + GQGA+ IE ++ + L+K I H T D ER+FL L Sbjct: 187 MSHRIDQILPPDISLHAVGQGALGIECRSDDTEVISLLKAIEHSQTRDRCLAERSFLRVL 246 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I L G+V + DG+ + + G DA +G A+ +R Sbjct: 247 EGGCQVPIGVDTQINSKELTLKGLVASVDGQKLVKDTVTGTAADAEKLGAQLARILRQKG 306 Query: 301 NKNVFN 306 + Sbjct: 307 ATEILE 312 >gi|157412912|ref|YP_001483778.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9215] gi|167008816|sp|A8G3L1|HEM3_PROM2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157387487|gb|ABV50192.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9215] Length = 318 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 103/308 (33%), Positives = 158/308 (51%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +I +R S LA+ + L IP ++ I ++T+GD+I + L +IG Sbjct: 1 MTNFKLKIASRRSKLAMVQTLWVKDQLER--NIPNLDVSIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQS 117 KGLFT+E+E +++ G D AVHS KD+PT L GL++ RED D + + Sbjct: 59 KGLFTKELEAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVSKKNDYYK 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L S++GTSSLRR A L + D RG + TR+ KL+ + I+LA AG+K Sbjct: 119 LETLPEGSIVGTSSLRRLAQLRNKYPHLVFKDIRGNVITRIEKLDAGEFDCIILAAAGLK 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL E I +I+ E + GQGA+ IE ++ K E++ V+ + T ERAFL Sbjct: 179 RLGFESRIHQIIPSEISLHAVGQGALGIECKSDDKKVLEIINVLEDKPTSQRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + LY G+V + DGK + GN + +G + A+ ++ Sbjct: 239 RELEGGCQVPIGVNSNIDNGQLYLTGMVASLDGKKLIKDQVIGNINNPELVGIELAKRLK 298 Query: 298 FISNKNVF 305 + Sbjct: 299 LQGADKIL 306 >gi|331018514|gb|EGH98570.1| porphobilinogen deaminase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 313 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + +AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYNAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT + ER+ L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRLIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G++ + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVQVAEALLAQG 298 Query: 301 NKNVF 305 + Sbjct: 299 AAEIL 303 >gi|307546845|ref|YP_003899324.1| porphobilinogen deaminase [Halomonas elongata DSM 2581] gi|307218869|emb|CBV44139.1| porphobilinogen deaminase [Halomonas elongata DSM 2581] Length = 380 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 108/304 (35%), Positives = 166/304 (54%), Gaps = 4/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RI TR S LA+ A R LM+VH P + ++ LST+GD+I + L ++GGKGL Sbjct: 72 QTLRIATRKSQLAMWQAEHVRDRLMEVH--PELTVELVALSTRGDQILDTPLAKVGGKGL 129 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ ++ G D AVHS KD+P + + L +S L + D F+S+ SL +L Sbjct: 130 FVKELEEAMLDGRADIAVHSMKDVPMQFPESLGLSVILAGAEPTDAFVSNQYASLDELPE 189 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSSLRR + R D+ V++ RG ++TRL KL+N + AILLA AG+KRL E+ Sbjct: 190 GARIGTSSLRRGLQMRERRPDLEVLNLRGNVQTRLGKLDNGEFDAILLATAGLKRLGLEE 249 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + L E P+ GQGA+ IE +++ + L+ ++ DT V ERA L+G Sbjct: 250 RITQELPPEICLPACGQGALGIECRMHDAELIGLLAPLDDPDTATRVRAERAMNTRLEGG 309 Query: 244 CKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG A + TL+ +V +G G+ + +G A+ + Sbjct: 310 CQVPIAGHAVFENDGQTLWLRALVGNPEGTEVLRAEGRGSIHEPEALGIRVAEELLDQGA 369 Query: 302 KNVF 305 ++ Sbjct: 370 GDIL 373 >gi|118592006|ref|ZP_01549400.1| porphobilinogen deaminase [Stappia aggregata IAM 12614] gi|118435302|gb|EAV41949.1| porphobilinogen deaminase [Stappia aggregata IAM 12614] Length = 303 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 143/299 (47%), Positives = 195/299 (65%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LALA A ETR LM H + + I+ + T GDRI +R L+E+GGKGLFT Sbjct: 1 MRIGTRGSALALAQAHETRDRLMAAHGLAEDSFEIVVIKTSGDRIQDRPLSEVGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G ID AVHS+KDMPT L GL ++A+LPRED+RD F+S A++L DL + Sbjct: 61 KEIEEALLDGRIDLAVHSSKDMPTVLPDGLALTAFLPREDVRDAFLSPKAKTLTDLPHGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+G+SSLRR+A++ R R DI V+ +RG ++TRL KL A LLA AG++RL E I Sbjct: 121 VVGSSSLRRQAMIKRLRPDIEVVMYRGNLQTRLRKLAEGAVDATLLAAAGLRRLGLEAEI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +L + F P+ GQGAICIE+ ++ E++ I+ E T ++ ERAFLA LDGSC+ Sbjct: 181 TSLLETDQFLPAVGQGAICIESRADDTATLEMLAAIHDEATQIRLDAERAFLAVLDGSCR 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I G A G TL+F GIVL DG HE + +G + DA+ IGR + ++ + Sbjct: 241 TPIGGLATLDGDTLHFRGIVLKPDGSEVHEATASGLKSDAVQIGRSVGEDLKSCMGPDF 299 >gi|329898164|ref|ZP_08272361.1| Porphobilinogen deaminase [gamma proteobacterium IMCC3088] gi|328920873|gb|EGG28310.1| Porphobilinogen deaminase [gamma proteobacterium IMCC3088] Length = 307 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 164/305 (53%), Gaps = 4/305 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I TR SPLAL A + +L H P + ++ ++++GD++ + L +IGG Sbjct: 1 MAK--IVIATRESPLALWQAHYVKDALEMAH--PGLAVELLGMTSRGDQLLDSPLAKIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RE D F+S+T +S+ Sbjct: 57 KGLFVKELETALLEGRADIAVHSMKDVPMSFPEGLCLGPICEREAPNDAFVSNTYESIDA 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L +R D+ V RG + TRL KL++ + AI+LA AG+ Sbjct: 117 LPKGAIVGTSSLRRECQLRSYRPDLVVNFLRGNVNTRLAKLDDGQYDAIILAAAGLILFG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE ++ ++L++V++H T V ERA L Sbjct: 177 FEDRIRSRLTPEQSLPAGGQGAVGIELRSDDEPTRDLIQVLHHPKTAAEVTAERALNQTL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA F +G TL+ G+V A DG G DA +G+ A + Sbjct: 237 NGGCQVPIAAFCVTEGDTLWLRGLVGAVDGSSILRAEARGKVEDAEVLGQQVANELLNQG 296 Query: 301 NKNVF 305 + + Sbjct: 297 AEAIL 301 >gi|158337071|ref|YP_001518246.1| porphobilinogen deaminase [Acaryochloris marina MBIC11017] gi|158307312|gb|ABW28929.1| porphobilinogen deaminase [Acaryochloris marina MBIC11017] Length = 314 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 104/304 (34%), Positives = 150/304 (49%), Gaps = 5/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LAL + L P + + +ST+GD I + L +IG KGLFT Sbjct: 2 IRIGSRKSQLALVQTHWVQGELQK--HFPEYEFEVCTMSTQGDNILDVALAKIGDKGLFT 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E ++ E D AVHS KD+PT L +GL + R D D + H A L L Sbjct: 60 KELEVSMLRKETDLAVHSLKDLPTNLPEGLCLGVVTERVDPADALVVHENFKAYQLDTLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR A L + D RG + TRL KL+ + I+LA AG++RL Sbjct: 120 EGAVIGTSSLRRLAQLRYNYPHLEFKDIRGNLNTRLQKLDEGEYDGIILAVAGLQRLGFG 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I +++ + GQGA+ IE + + +K + HE + ER+FL EL+G Sbjct: 180 DRIHQVIPANISLHAVGQGALGIECREGDEEIMAFIKALEHEPSAHRCTAERSFLHELEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I K L G+V + DGK + + +G A +G D AQ +R + Sbjct: 240 GCQVPIGVNTSLKEGQLTLVGMVASLDGKRLIKDTVSGPIASATQLGIDLAQKVREQGAQ 299 Query: 303 NVFN 306 + Sbjct: 300 EILE 303 >gi|126695860|ref|YP_001090746.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9301] gi|158513419|sp|A3PBM0|HEM3_PROM0 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|126542903|gb|ABO17145.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9301] Length = 316 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 102/308 (33%), Positives = 159/308 (51%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +I +R S LA+ + L IP + I ++T+GD+I + L +IG Sbjct: 1 MTNFKLKIASRRSKLAMVQTLWVKDQLER--NIPNLEVSIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117 KGLFT+E+E +++ G D AVHS KD+PT L GL++ RED D + + Sbjct: 59 KGLFTKELEAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVNKKNDCYK 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L S++GTSSLRR A L + D RG + TR+ KL+ + I+LA AG+K Sbjct: 119 LETLPEGSIVGTSSLRRLAQLRNKYPHLIFKDIRGNVITRIEKLDAGEFDCIILAAAGLK 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL E I +I+ E + GQGA+ IE ++ K E++ ++ + T ERAFL Sbjct: 179 RLGFESRIHQIIPSEISLHAVGQGALGIECKSDDKKVLEIINILEDKPTSQRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + + L G+V + DG+ + GN D IG++ A+ ++ Sbjct: 239 RELEGGCQVPIGVNSNIQNEKLCLTGMVASLDGERLIKDQHIGNINDPEEIGKELAKKLK 298 Query: 298 FISNKNVF 305 + + Sbjct: 299 QQGAEEIL 306 >gi|220933221|ref|YP_002512120.1| Hydroxymethylbilane synthase [Thioalkalivibrio sp. HL-EbGR7] gi|254800261|sp|B8GSU8|HEM3_THISH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|219994531|gb|ACL71133.1| Hydroxymethylbilane synthase [Thioalkalivibrio sp. HL-EbGR7] Length = 316 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 116/306 (37%), Positives = 166/306 (54%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLA+ A + + H P + ++ ++T+GDRI + L ++GG Sbjct: 1 MPLDTLRIATRKSPLAVWQAEHVAALVKARH--PGVRVELVGMTTQGDRILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +L +GL + L RED RD F+S+T +SL + Sbjct: 59 KGLFVKELETGLLEGRADIAVHSMKDVPMELPEGLCLPVILDREDPRDAFVSNTFKSLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+ L ++D RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPRDARVGTSSLRRQCQLRHDHPHFQILDLRGNVNTRLAKLDAGEFDAIILAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I + E P+ GQGAI IE N+P+ L+ ++ DT V ERA A L Sbjct: 179 FEVRIASEITPEQSLPAIGQGAIGIECRENDPEVMALIGSLDDPDTHVRVAAERAMNARL 238 Query: 241 DGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ IAG+A TL G+V DG + +G R +A +GR A + Sbjct: 239 NGGCQVPIAGYAELTDADTLRLRGLVGEPDGSLILRAELSGPRAEAEALGRAVADLLLHE 298 Query: 300 SNKNVF 305 + Sbjct: 299 GAGPIL 304 >gi|77164030|ref|YP_342555.1| porphobilinogen deaminase [Nitrosococcus oceani ATCC 19707] gi|76882344|gb|ABA57025.1| hydroxymethylbilane synthase [Nitrosococcus oceani ATCC 19707] Length = 310 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 120/306 (39%), Positives = 167/306 (54%), Gaps = 3/306 (0%) Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M K RI TR S LAL A +L H P NI ++ +ST+GD+I + L +IG Sbjct: 1 MSAKTCLRIATRKSLLALWQAEYVADTLR--HHYPDLNIELVRMSTQGDKILDTPLAKIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E+ L SGE D AVHS KD+P L + L I+ R D RD F+S+ Q L Sbjct: 59 GKGLFIKELEQGLFSGEADIAVHSMKDVPVDLPENLHIAVICQRGDPRDAFVSNHWQDLD 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + +GTSSLRR++ + R D V+D RG + TRL KL+NN+ AI+LA AG+KRL Sbjct: 119 SLPEGARVGTSSLRRQSQVRERRPDFQVLDLRGNVNTRLAKLDNNEFDAIILAAAGLKRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + I+E L E P+ GQGAI IE + +EL+KV+ H T ++ ERA A Sbjct: 179 ELTQRIRESLAPEVSLPAIGQGAIGIECRKGDTATEELIKVLEHPPTRITIRAERALNAR 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L G C+ IAG+A + L +V DG G +A ++G + + Sbjct: 239 LAGGCQVPIAGYAELEDERLRLRALVGQPDGGRVIRGETWGMPGEAESLGASLGEDLLRR 298 Query: 300 SNKNVF 305 + Sbjct: 299 GADKIL 304 >gi|295399407|ref|ZP_06809389.1| porphobilinogen deaminase [Geobacillus thermoglucosidasius C56-YS93] gi|312110034|ref|YP_003988350.1| porphobilinogen deaminase [Geobacillus sp. Y4.1MC1] gi|294978873|gb|EFG54469.1| porphobilinogen deaminase [Geobacillus thermoglucosidasius C56-YS93] gi|311215135|gb|ADP73739.1| porphobilinogen deaminase [Geobacillus sp. Y4.1MC1] Length = 310 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 172/305 (56%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P + + TKGD+I + TL+++GGKGL Sbjct: 2 RKIIVGSRRSKLALTQTNWVIEQLRQLGA--PFEFEVKEIVTKGDKILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE +++ EID AVHS KDMP L GL I PRED RDV IS ++ DL Sbjct: 60 FVKEIEHAMLNNEIDMAVHSMKDMPAVLPDGLIIGCVPPREDHRDVLISKNKETFADLPS 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +V+GTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+ Sbjct: 120 GAVVGTSSLRRSAQLLAKRPDLTIKWIRGNIDTRLAKLQTEDYDAIVLAAAGLVRMGWAS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L + P+ GQGA+ +E ++ + +E ++ +N DT +V ERAFL +L+G Sbjct: 180 DVITEYLATDVCLPAVGQGALAVECRESDEELREWLQKLNDIDTERAVYAERAFLRQLEG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A+ + + +V + DGK ++ + +G+ D N+G AA + Sbjct: 240 GCQVPIAGYAHVNNQNDIVLTALVASPDGKELYKETVSGS--DPENVGTTAADLLIKRGA 297 Query: 302 KNVFN 306 K + + Sbjct: 298 KALID 302 >gi|238897905|ref|YP_002923584.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259647800|sp|C4K4E3|HEM3_HAMD5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|229465662|gb|ACQ67436.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 309 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M R+ TR SPLAL A ++ L H P ++++P+ T+GD I L++ GG Sbjct: 1 MSNNMIRLATRQSPLALWQAHYVKTGLEFFH--PDLKVILLPMVTQGDNILGTALSKTGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ D AVHS KDMP +GL + A RED RD F+S + Sbjct: 59 KGLFVKELERAVLDNRADIAVHSIKDMPLYFPEGLGLVAVCEREDPRDAFLSLRYHDVAQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L + I V D RG + RL KL+ AI+LA AG+KRL Sbjct: 119 LPEGSVVGTSSLRRQCQLYKNYPGIVVRDLRGNVGARLKKLDQGDYDAIVLAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E + +IL E P+ GQGAI IE +++ + V +NH + ++CERA L L Sbjct: 179 LENRMTQILRPETSLPAAGQGAIGIECRLDDTVTLQRVATLNHRPSQLKISCERALLKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C++ I +A + L+ V A DG++ + R GN A IG + A + Sbjct: 239 EGGCQTPIGSYAEIENDELWLRAFVGAPDGQLIIDGERRGNFDSAEKIGFELANELLSRG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AEAIL 303 >gi|300115116|ref|YP_003761691.1| porphobilinogen deaminase [Nitrosococcus watsonii C-113] gi|299541053|gb|ADJ29370.1| porphobilinogen deaminase [Nitrosococcus watsonii C-113] Length = 314 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 118/306 (38%), Positives = 166/306 (54%), Gaps = 3/306 (0%) Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M K RI TR S LAL A ++L H P ++ ++ +ST+GD+I + L +IG Sbjct: 5 MSAKTCLRIATRKSLLALWQAEYVANTLR--HHYPDLSVELVRMSTQGDKILDTPLAKIG 62 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E+ L SGE D AVHS KD+P L + L I+ R D RD F+S+ Q L Sbjct: 63 GKGLFIKELEQGLFSGEADIAVHSMKDVPVDLPENLHIAVICQRGDPRDAFVSNHWQDLD 122 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + +GTSSLRR++ + R D V+D RG + TRL KL+NN+ I+LA AG+KRL Sbjct: 123 SLPEGARLGTSSLRRQSQVRERRPDFQVLDLRGNVNTRLAKLDNNEFDGIILATAGLKRL 182 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I+E L E P+ GQGAI IE + +EL+KV+ H T ++ ERA A Sbjct: 183 ELTHRIRESLAPEVSLPAIGQGAIGIECRKGDTATEELIKVLEHPPTRITLQAERALNAR 242 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L G C+ IAG+A + L +V DG G DA ++G + + Sbjct: 243 LAGGCQVPIAGYAELEDERLRLRALVGQPDGGRVIRGETWGMPGDAESLGASLGEDLLRR 302 Query: 300 SNKNVF 305 + Sbjct: 303 GADKIL 308 >gi|239833011|ref|ZP_04681340.1| porphobilinogen deaminase [Ochrobactrum intermedium LMG 3301] gi|239825278|gb|EEQ96846.1| porphobilinogen deaminase [Ochrobactrum intermedium LMG 3301] Length = 314 Score = 380 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 149/302 (49%), Positives = 195/302 (64%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IGTR S LALA A+ETR LM+ H +P I I+P+ST GDRI +R L+EIGGKGLF Sbjct: 10 TLKIGTRGSKLALAQAYETRRRLMEAHGLPEEAIEIVPMSTAGDRIQDRALSEIGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 TEEIE+ L G ID AVHS KDMPT L GL +S +L RED RD FI TA L DL Sbjct: 70 TEEIEQALTDGRIDLAVHSTKDMPTVLPDGLHLSVFLEREDPRDAFIGRTASRLLDLPQG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G+SSLRR+AL+ R R DI V+ FRG ++TRL KL + LA AG++RL V Sbjct: 130 ATVGSSSLRRQALIRRLRPDIQVVIFRGNVDTRLRKLEAGEVDGTFLACAGLRRLGLGDV 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E+++ E F P+PGQGAI IET + + + L+ + H +T ++ CERAFLA LDGSC Sbjct: 190 ITELVDPESFLPAPGQGAIGIETRIGDTRIDALLAPLAHRETGIALACERAFLAALDGSC 249 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A G + F+G++L DG HE+ G +A +GR+AA+ IR + Sbjct: 250 RTPIAGLATVDGDRVSFHGMILKPDGSEAHEIRAEGPVSNAAALGREAAERIRAKAGPQF 309 Query: 305 FN 306 F Sbjct: 310 FE 311 >gi|12655813|gb|AAK00605.1|AF221100_2 porphobilinogen deaminase [Selenomonas ruminantium subsp. ruminantium] Length = 313 Score = 380 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 110/307 (35%), Positives = 170/307 (55%), Gaps = 3/307 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+K IGTR S LAL A + L + + P + + ++TKGD+I + L +IGG Sbjct: 1 MKKDTIVIGTRSSKLALWQAEYVKGRLEE--EYPGLKVELKLMTTKGDKILDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E ++SG ID AVHS KDMPT+L +GL ++A R D D +S ++ Sbjct: 59 KGLFTKELEMDMLSGGIDLAVHSLKDMPTELPEGLTLAAITKRFDPGDAVVSPKFKTFAA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRRKA LL R D+++ D RG + TRL KL + AI+LA AG+KRL Sbjct: 119 LPCGAKVGTSSLRRKAQLLHARPDLNICDLRGNVNTRLAKLESENFDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I E+L + P+ GQGA+ IET ++ +E++ +N E T ERAFL + Sbjct: 179 FGERITEVLPRDMVLPAVGQGALAIETREDDADMREMLAFLNDEATVHCAKAERAFLGRV 238 Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ + +A + ++ + DG+ + +G +A +G A+ + Sbjct: 239 EGGCQVPVGVYAVPAANDEIQVEAVIASLDGQRLYRDKLSGKASEAEKLGVTLAEKLLAA 298 Query: 300 SNKNVFN 306 + + Sbjct: 299 GGQKILQ 305 >gi|150398163|ref|YP_001328630.1| porphobilinogen deaminase [Sinorhizobium medicae WSM419] gi|150029678|gb|ABR61795.1| porphobilinogen deaminase [Sinorhizobium medicae WSM419] Length = 330 Score = 380 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 152/305 (49%), Positives = 208/305 (68%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA ETR L H +P I+ LSTKGDRIT+R+L EIGG Sbjct: 22 MQTKPFRIGTRGSPLALAQTHETRDRLAAAHGLPVEMFEIVTLSTKGDRITDRSLAEIGG 81 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E++L+SG++D AVHS+KDM TKL GL +SA+LPRED+RD F+ +A L + Sbjct: 82 KGLFTEELEQQLLSGDLDFAVHSSKDMTTKLPDGLFLSAFLPREDVRDAFVGRSATRLAE 141 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R D++VI +RG++ETRL KL + LLAYAG++RL Sbjct: 142 LPQGATVGSSSLRRQALIRRLRPDVNVITYRGQVETRLRKLAEGQVDGTLLAYAGLRRLG 201 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V E+L+ E FPP+P QGAICIE + + + L+ ++ T ++V+CER FLA L Sbjct: 202 MAHVPTELLDPESFPPAPAQGAICIEARLGDDRINALLSAVDDPRTHEAVSCERGFLATL 261 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG+A G+ + F G++L DG H + +G DA +GR+A + IR + Sbjct: 262 DGSCRTPIAGYAQSDGARIRFSGMILTPDGTTCHRIETDGRTADAAALGREAGERIRAKA 321 Query: 301 NKNVF 305 F Sbjct: 322 GPEFF 326 >gi|226946767|ref|YP_002801840.1| porphobilinogen deaminase [Azotobacter vinelandii DJ] gi|226721694|gb|ACO80865.1| porphobilinogen deaminase [Azotobacter vinelandii DJ] Length = 314 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 108/302 (35%), Positives = 163/302 (53%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGGKGL Sbjct: 5 REIRIATRKSALALWQAEYVKARLEQAH--PGLAVSLVPMVSRGDKLLDAPLAKIGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL +L Sbjct: 63 FVKELETALLENAADIAVHSMKDVPMEFPEGLGLYCICEREDPRDAFVSNAFASLDELPA 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S+IGTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL E Sbjct: 123 GSLIGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEG 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ + I D P+ GQGA+ IE + + Q L+ ++H T V ERA L+G Sbjct: 183 RIRSRIAIADSLPAGGQGAVGIECRSADREIQALLAPLDHAPTALRVGAERALNKRLNGG 242 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IA +A + L+ G+V DG++ +A +G A+ + + Sbjct: 243 CQVPIACYAELEDGQLWLRGLVGQPDGRLLLRAEARAPADEAEALGVRVAEALLAQGAQR 302 Query: 304 VF 305 + Sbjct: 303 IL 304 >gi|254525987|ref|ZP_05138039.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9202] gi|221537411|gb|EEE39864.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9202] Length = 318 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 104/308 (33%), Positives = 159/308 (51%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +I +R S LA+ + L IP ++ I ++T+GD+I + L +IG Sbjct: 1 MTNFKLKIASRRSKLAMVQTLWVKDQLER--NIPNLDVSIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQS 117 KGLFT+E+E +++ G D AVHS KD+PT L GL++ RED D + + Sbjct: 59 KGLFTKELEAQMLVGHADIAVHSLKDLPTNLPTGLKLGCITKREDPADALVVSKKNDCYK 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L S++GTSSLRR A L + D RG + TR+ KL+ + I+LA AG+K Sbjct: 119 LETLPEGSIVGTSSLRRLAQLRNKYPHLVFKDIRGNVITRIEKLDAGEFDCIILAAAGLK 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL E I +I+ E + GQGA+ IE ++ K E++ V+ + T ERAFL Sbjct: 179 RLGFESRIHQIIPSEISLHAVGQGALGIECKSDDKKVLEIINVLEDKPTSQRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + LY G+V + DGK + GN + +G + A+ ++ Sbjct: 239 RELEGGCQVPIGVNSNIDNGQLYLTGMVASLDGKKLIKDQVIGNINNPELVGIELAKRLK 298 Query: 298 FISNKNVF 305 F + Sbjct: 299 FQGADKIL 306 >gi|306844857|ref|ZP_07477440.1| porphobilinogen deaminase [Brucella sp. BO1] gi|306274789|gb|EFM56570.1| porphobilinogen deaminase [Brucella sp. BO1] Length = 314 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 143/302 (47%), Positives = 197/302 (65%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLF Sbjct: 10 TLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 TEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL Sbjct: 70 TEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL V Sbjct: 130 ATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADV 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC Sbjct: 190 ITDLLDPSVFPPAPGQGAIGIESRIGDERIDALLAPLAHRETQIALACERAFLGSLDGSC 249 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + Sbjct: 250 RTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGAVSDAAALGTDAANRVRAMAGPHF 309 Query: 305 FN 306 F+ Sbjct: 310 FD 311 >gi|11467957|sp|O66621|HEM3_AQUAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 304 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 114/301 (37%), Positives = 171/301 (56%), Gaps = 5/301 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL A + L + ++ ++T GD+IT+ L +IGGKGLF Sbjct: 2 KIRIGTRKSKLALWQANYVKDFLEKH---WGVEVELVKITTTGDKITDVPLAKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIEK L+ G ID AVHS KD+P + KGL++ A RE+ DV IS + + L +L Sbjct: 59 VKEIEKALLEGSIDLAVHSLKDVPMVIPKGLKLGAITKRENPYDVLISRSGKKLYELPSG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SVIGTSSLRR+ + + R D+ V RG ++TR+ KL A++LAYAG+KR+ E Sbjct: 119 SVIGTSSLRRQVQIKKRRRDLKVEVLRGNVDTRMRKLKEGLYDAVILAYAGVKRMGYESE 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E+L EDF P+ GQG++ IE + + +EL+K +N+E+++ ER FL L+G C Sbjct: 179 ITEVL--EDFIPAVGQGSLAIEIREGDKRIEELIKPLNNEESFLCAIAERTFLRRLEGGC 236 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + + FA + TL + + + + E R GN +A +G A+ + + + Sbjct: 237 QVPVGAFAKIENGTLKMKAFISDIEAERYIEGYREGNPEEAEKLGLSLAEELLKKGGEEI 296 Query: 305 F 305 Sbjct: 297 L 297 >gi|222054398|ref|YP_002536760.1| porphobilinogen deaminase [Geobacter sp. FRC-32] gi|254800252|sp|B9M416|HEM3_GEOSF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|221563687|gb|ACM19659.1| porphobilinogen deaminase [Geobacter sp. FRC-32] Length = 318 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 166/305 (54%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A +S L + P + ++ + T GD+I + L ++GG Sbjct: 1 MALKQLRIGTRASQLALWQANWVKSELEQ--RYPGMEVSLVKIKTIGDKILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ G+ID AVHS KD+PT+ +GL + RED RD IS D Sbjct: 59 KGLFVKEIEEAMLRGDIDIAVHSMKDVPTEFPEGLGLHCITEREDPRDAVISR-GTKFAD 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A LL+ R D+ ++ RG +ETR+NKL K A++LA AG+KRL Sbjct: 118 LPQGAKIGTSALRRQAQLLKVRPDMEMVIIRGNVETRINKLETEKLDAVILAAAGLKRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + E L + P+ GQGA+ IE ++N + ++ + NH T +V ERA L Sbjct: 178 FTEKVAEYLPTDLSIPAIGQGALGIECRLDNEEVKQTIDFFNHPATAYAVRAERALLWRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA F GS L G + + DGK + G D +G A+ + Sbjct: 238 EGGCQVPIAAFGEVTGSDLKLVGFIASVDGKTSVRGTITGPAADCEKLGIKLAEQLLADG 297 Query: 301 NKNVF 305 + Sbjct: 298 GHAIL 302 >gi|306842959|ref|ZP_07475593.1| porphobilinogen deaminase [Brucella sp. BO2] gi|306286887|gb|EFM58412.1| porphobilinogen deaminase [Brucella sp. BO2] Length = 314 Score = 379 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 143/302 (47%), Positives = 197/302 (65%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLF Sbjct: 10 TLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 TEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL Sbjct: 70 TEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL V Sbjct: 130 ATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADV 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC Sbjct: 190 ITDLLDPSVFPPAPGQGAIGIESRIGDERIDALLAPLAHRETQIALACERAFLGALDGSC 249 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + Sbjct: 250 RTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHF 309 Query: 305 FN 306 F+ Sbjct: 310 FD 311 >gi|62290744|ref|YP_222537.1| porphobilinogen deaminase [Brucella abortus bv. 1 str. 9-941] gi|82700655|ref|YP_415229.1| porphobilinogen deaminase [Brucella melitensis biovar Abortus 2308] gi|189024957|ref|YP_001935725.1| porphobilinogen deaminase [Brucella abortus S19] gi|225853324|ref|YP_002733557.1| porphobilinogen deaminase [Brucella melitensis ATCC 23457] gi|254690032|ref|ZP_05153286.1| porphobilinogen deaminase [Brucella abortus bv. 6 str. 870] gi|254694521|ref|ZP_05156349.1| porphobilinogen deaminase [Brucella abortus bv. 3 str. Tulya] gi|254696146|ref|ZP_05157974.1| porphobilinogen deaminase [Brucella abortus bv. 2 str. 86/8/59] gi|254731064|ref|ZP_05189642.1| porphobilinogen deaminase [Brucella abortus bv. 4 str. 292] gi|256045496|ref|ZP_05448379.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. Rev.1] gi|256112222|ref|ZP_05453143.1| porphobilinogen deaminase [Brucella melitensis bv. 3 str. Ether] gi|256258286|ref|ZP_05463822.1| porphobilinogen deaminase [Brucella abortus bv. 9 str. C68] gi|256263189|ref|ZP_05465721.1| porphobilinogen deaminase [Brucella melitensis bv. 2 str. 63/9] gi|260546007|ref|ZP_05821747.1| porphobilinogen deaminase [Brucella abortus NCTC 8038] gi|260562805|ref|ZP_05833291.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M] gi|260755568|ref|ZP_05867916.1| porphobilinogen deaminase [Brucella abortus bv. 6 str. 870] gi|260758791|ref|ZP_05871139.1| porphobilinogen deaminase [Brucella abortus bv. 4 str. 292] gi|260760515|ref|ZP_05872858.1| porphobilinogen deaminase [Brucella abortus bv. 2 str. 86/8/59] gi|260884592|ref|ZP_05896206.1| porphobilinogen deaminase [Brucella abortus bv. 9 str. C68] gi|261214839|ref|ZP_05929120.1| porphobilinogen deaminase [Brucella abortus bv. 3 str. Tulya] gi|265991918|ref|ZP_06104475.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. Rev.1] gi|265993649|ref|ZP_06106206.1| porphobilinogen deaminase [Brucella melitensis bv. 3 str. Ether] gi|297247130|ref|ZP_06930848.1| porphobilinogen deaminase [Brucella abortus bv. 5 str. B3196] gi|23821695|sp|Q8YJB0|HEM3_BRUME RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|75496218|sp|Q57B08|HEM3_BRUAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123768401|sp|Q2YLM5|HEM3_BRUA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238058730|sp|B2S842|HEM3_BRUA1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800235|sp|C0RFD1|HEM3_BRUMB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|62196876|gb|AAX75176.1| HemC, porphobilinogen deaminase [Brucella abortus bv. 1 str. 9-941] gi|82616756|emb|CAJ11843.1| Porphobilinogen deaminase [Brucella melitensis biovar Abortus 2308] gi|189020529|gb|ACD73251.1| Porphobilinogen deaminase [Brucella abortus S19] gi|225641689|gb|ACO01603.1| porphobilinogen deaminase [Brucella melitensis ATCC 23457] gi|260096114|gb|EEW79990.1| porphobilinogen deaminase [Brucella abortus NCTC 8038] gi|260152821|gb|EEW87913.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M] gi|260669109|gb|EEX56049.1| porphobilinogen deaminase [Brucella abortus bv. 4 str. 292] gi|260670947|gb|EEX57768.1| porphobilinogen deaminase [Brucella abortus bv. 2 str. 86/8/59] gi|260675676|gb|EEX62497.1| porphobilinogen deaminase [Brucella abortus bv. 6 str. 870] gi|260874120|gb|EEX81189.1| porphobilinogen deaminase [Brucella abortus bv. 9 str. C68] gi|260916446|gb|EEX83307.1| porphobilinogen deaminase [Brucella abortus bv. 3 str. Tulya] gi|262764630|gb|EEZ10551.1| porphobilinogen deaminase [Brucella melitensis bv. 3 str. Ether] gi|263002984|gb|EEZ15277.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. Rev.1] gi|263093111|gb|EEZ17246.1| porphobilinogen deaminase [Brucella melitensis bv. 2 str. 63/9] gi|297174299|gb|EFH33646.1| porphobilinogen deaminase [Brucella abortus bv. 5 str. B3196] gi|326539601|gb|ADZ87816.1| porphobilinogen deaminase [Brucella melitensis M5-90] Length = 314 Score = 379 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 143/302 (47%), Positives = 197/302 (65%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLF Sbjct: 10 TLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 TEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL Sbjct: 70 TEEIEQALKDGRIDIAVHSTKDMPTALPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL V Sbjct: 130 ATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADV 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC Sbjct: 190 ITDVLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 249 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + Sbjct: 250 RTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHF 309 Query: 305 FN 306 F+ Sbjct: 310 FD 311 >gi|254447439|ref|ZP_05060905.1| porphobilinogen deaminase [gamma proteobacterium HTCC5015] gi|198262782|gb|EDY87061.1| porphobilinogen deaminase [gamma proteobacterium HTCC5015] Length = 313 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 115/304 (37%), Positives = 168/304 (55%), Gaps = 4/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RI TR SPLAL A + + L + P +I ++ ++TKGD+I + L +IGGKGL Sbjct: 2 KTLRIATRQSPLALWQAEDVAAKLKAHY--PDLDIELVKMTTKGDKILDTPLAKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMP--TKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 F +E+E ++ G D AVHS KD+P ++ +GL +S L RED RD F+S+ SL +L Sbjct: 60 FIKELEVGMLEGRADIAVHSMKDVPVDSEFPEGLHLSVILEREDPRDAFVSNRYNSLDEL 119 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT+SLRR+ +L + RG + TRL KL++ + AI+LA AG+ RL Sbjct: 120 PEGAVVGTASLRRQCQVLGRYPHLKTAVLRGSVGTRLGKLDDGQFDAIVLASAGLMRLGL 179 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I L E P+ GQGA+ IE ++ + +L+ + DT + ERA A L Sbjct: 180 EERITAKLPPEISLPAIGQGAVGIECRKDDTELNKLLAPLADRDTTTRLKAERALNARLQ 239 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ IAG+A +G L G+V A DG + R G R A +IG A+ + Sbjct: 240 GGCQVPIAGYAELEGDQLSMRGLVGAPDGSKLYTSERRGPRDQAADIGLAVAEDLLSQGA 299 Query: 302 KNVF 305 V Sbjct: 300 NAVL 303 >gi|163757401|ref|ZP_02164490.1| porphobilinogen deaminase [Hoeflea phototrophica DFL-43] gi|162284903|gb|EDQ35185.1| porphobilinogen deaminase [Hoeflea phototrophica DFL-43] Length = 312 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 159/305 (52%), Positives = 209/305 (68%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + KP+RIGTR SPLALA A ETR LM H +P I+ LSTKGDRIT+R L EIGGK Sbjct: 5 QMKPYRIGTRGSPLALAQAHETRERLMAAHDLPESAFEIVVLSTKGDRITDRPLAEIGGK 64 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFTEE+E++L G +D AVHS+KDMPT L +GL I YL RED RD +IS A L+DL Sbjct: 65 GLFTEELEEQLSDGRLDLAVHSSKDMPTALPEGLGIVTYLEREDPRDAYISSAAPRLEDL 124 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+G+SSLRR+AL+ R R DISVI FRG ++TRL KL + + HA +LA+AG+KRL K Sbjct: 125 PQKAVVGSSSLRRQALIRRLRPDISVITFRGLVDTRLRKLADGEVHATMLAFAGLKRLGK 184 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +V+ +++ E FPP+PGQGAICIE +++ + EL+ I+H DT ++NCER FL LD Sbjct: 185 SEVVTNLMDPESFPPAPGQGAICIEARLDDERIAELLAPIDHADTHAALNCERGFLGALD 244 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC++ IAG A + + FYG++L DG FH++ G DA +G DA +R + Sbjct: 245 GSCRTPIAGHATLENGQVSFYGMILTPDGTTFHDIRVQGPAADAAQLGADAGAEVRARAG 304 Query: 302 KNVFN 306 F Sbjct: 305 SKFFE 309 >gi|170078218|ref|YP_001734856.1| porphobilinogen deaminase [Synechococcus sp. PCC 7002] gi|169885887|gb|ACA99600.1| porphobilinogen deaminase [Synechococcus sp. PCC 7002] Length = 321 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 105/308 (34%), Positives = 160/308 (51%), Gaps = 6/308 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ RIG+R S LAL + R L + P + + T+GD++ + L++IG K Sbjct: 7 SKRTVRIGSRKSQLALVQTYWVRDELQKAY--PEITFEVQTMETQGDKVLDVALSKIGDK 64 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSL 118 GLFT+E+E ++ GE D AVHS KD+PT L +GL + R D D + H + L Sbjct: 65 GLFTQELEDGMLKGETDFAVHSLKDLPTNLPEGLMLGCVTERVDPADALVVNEKHRDKKL 124 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 + L SVIGTSSLRR A L + D RG + TRL KL+ + AI+LA AG++R Sbjct: 125 ETLPSGSVIGTSSLRRLAQLRHHFPHLEFKDIRGNVNTRLAKLDRGEYDAIILAAAGLQR 184 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV-INHEDTWDSVNCERAFL 237 L I +I++ + + GQGA+ IE + + L++ + H ++ D ER+FL Sbjct: 185 LDFGDRIHQIISSDISLHAVGQGALGIECRDGDEEILGLLRPVLEHAESRDRCYAERSFL 244 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +L+G C+ I +G L G+V + DG+ +G+R DA +G + AQ Sbjct: 245 RQLEGGCQVPIGVNTTIEGDRLTLVGMVASLDGQTLIRDEVSGSRADAEKLGIELAQKAI 304 Query: 298 FISNKNVF 305 + Sbjct: 305 AQGADKIL 312 >gi|23502739|ref|NP_698866.1| porphobilinogen deaminase [Brucella suis 1330] gi|161619804|ref|YP_001593691.1| porphobilinogen deaminase [Brucella canis ATCC 23365] gi|163843911|ref|YP_001628315.1| porphobilinogen deaminase [Brucella suis ATCC 23445] gi|254704902|ref|ZP_05166730.1| porphobilinogen deaminase [Brucella suis bv. 3 str. 686] gi|254707583|ref|ZP_05169411.1| porphobilinogen deaminase [Brucella pinnipedialis M163/99/10] gi|254708880|ref|ZP_05170691.1| porphobilinogen deaminase [Brucella pinnipedialis B2/94] gi|256030406|ref|ZP_05444020.1| porphobilinogen deaminase [Brucella pinnipedialis M292/94/1] gi|256059864|ref|ZP_05450051.1| porphobilinogen deaminase [Brucella neotomae 5K33] gi|256158389|ref|ZP_05456287.1| porphobilinogen deaminase [Brucella ceti M490/95/1] gi|256253808|ref|ZP_05459344.1| porphobilinogen deaminase [Brucella ceti B1/94] gi|256370288|ref|YP_003107799.1| porphobilinogen deaminase [Brucella microti CCM 4915] gi|260169315|ref|ZP_05756126.1| porphobilinogen deaminase [Brucella sp. F5/99] gi|260567624|ref|ZP_05838094.1| porphobilinogen deaminase [Brucella suis bv. 4 str. 40] gi|261220941|ref|ZP_05935222.1| porphobilinogen deaminase [Brucella ceti B1/94] gi|261315070|ref|ZP_05954267.1| porphobilinogen deaminase [Brucella pinnipedialis M163/99/10] gi|261316373|ref|ZP_05955570.1| porphobilinogen deaminase [Brucella pinnipedialis B2/94] gi|261323834|ref|ZP_05963031.1| porphobilinogen deaminase [Brucella neotomae 5K33] gi|261755596|ref|ZP_05999305.1| porphobilinogen deaminase [Brucella suis bv. 3 str. 686] gi|261758828|ref|ZP_06002537.1| porphobilinogen deaminase [Brucella sp. F5/99] gi|265987445|ref|ZP_06100002.1| porphobilinogen deaminase [Brucella pinnipedialis M292/94/1] gi|265996901|ref|ZP_06109458.1| porphobilinogen deaminase [Brucella ceti M490/95/1] gi|38258150|sp|Q8FYI6|HEM3_BRUSU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189042875|sp|A9M8M2|HEM3_BRUC2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189042876|sp|B0CID9|HEM3_BRUSI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|23348756|gb|AAN30781.1| porphobilinogen deaminase [Brucella suis 1330] gi|161336615|gb|ABX62920.1| porphobilinogen deaminase [Brucella canis ATCC 23365] gi|163674634|gb|ABY38745.1| porphobilinogen deaminase [Brucella suis ATCC 23445] gi|256000451|gb|ACU48850.1| porphobilinogen deaminase [Brucella microti CCM 4915] gi|260157142|gb|EEW92222.1| porphobilinogen deaminase [Brucella suis bv. 4 str. 40] gi|260919525|gb|EEX86178.1| porphobilinogen deaminase [Brucella ceti B1/94] gi|261295596|gb|EEX99092.1| porphobilinogen deaminase [Brucella pinnipedialis B2/94] gi|261299814|gb|EEY03311.1| porphobilinogen deaminase [Brucella neotomae 5K33] gi|261304096|gb|EEY07593.1| porphobilinogen deaminase [Brucella pinnipedialis M163/99/10] gi|261738812|gb|EEY26808.1| porphobilinogen deaminase [Brucella sp. F5/99] gi|261745349|gb|EEY33275.1| porphobilinogen deaminase [Brucella suis bv. 3 str. 686] gi|262551369|gb|EEZ07359.1| porphobilinogen deaminase [Brucella ceti M490/95/1] gi|264659642|gb|EEZ29903.1| porphobilinogen deaminase [Brucella pinnipedialis M292/94/1] Length = 314 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 143/302 (47%), Positives = 197/302 (65%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLF Sbjct: 10 TLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 TEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL Sbjct: 70 TEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL V Sbjct: 130 ATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADV 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC Sbjct: 190 ITDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 249 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + Sbjct: 250 RTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHF 309 Query: 305 FN 306 F+ Sbjct: 310 FD 311 >gi|116750623|ref|YP_847310.1| porphobilinogen deaminase [Syntrophobacter fumaroxidans MPOB] gi|158512355|sp|A0LN73|HEM3_SYNFM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|116699687|gb|ABK18875.1| hydroxymethylbilane synthase [Syntrophobacter fumaroxidans MPOB] Length = 309 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 171/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RIGTR S LAL + ++++ + P + + + T GD+I + L ++GG Sbjct: 1 MTDRVIRIGTRGSMLALKQSGNVKAAMEAL--WPGLRVELQVVRTTGDKILDVPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE L++ +D AVHS KD+P L +GL+I A RED RDV ++ T + + D Sbjct: 59 KGLFVKEIEDALLARTVDLAVHSMKDVPAILPEGLEIGAIPKREDPRDVIVTRTGKGIAD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR + + + R DI + + RG IETRL KL AI+LA AG+ R+ Sbjct: 119 LPMGGRVGTSSLRRASQIRKLRPDIEIANLRGNIETRLRKLTEGAFDAIILAAAGLHRMG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + L+ DF P+ GQGAI IE ++ + +EL+ ++ DT +V ER+ L L Sbjct: 179 WQNRVTSYLDPADFLPAIGQGAIGIELRCDDGEVRELLAPLHDPDTHVAVEAERSLLRTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I G A+ TL G+V + DG+ SR G+ A IGRD + Sbjct: 239 EGGCQVPIGGHAHLVDGTLTLSGMVASIDGEELFRASRAGSPAQARKIGRDVGMELLDSG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 ARRILE 304 >gi|496214|gb|AAA18907.1| porophorbilinogen deaminase [Pseudomonas aeruginosa] Length = 314 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 111/307 (36%), Positives = 165/307 (53%), Gaps = 3/307 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSS-LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + RI TR S LAL A S+ L H P + ++P++++GD++ + L +IG Sbjct: 1 MSSREIRIATRQSALALWQAEYVNSTGLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 GKGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLE 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L SV+GTS L R+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 QLPAGSVVGTSRLGRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGVIRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA Sbjct: 179 GFESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKR 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ IA +A +G L+ G+V DG DA +G A+ + Sbjct: 239 LNGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLADAEALGVRVAEDLLEQ 298 Query: 300 SNKNVFN 306 + + Sbjct: 299 GAEAILE 305 >gi|46201306|ref|ZP_00208053.1| COG0181: Porphobilinogen deaminase [Magnetospirillum magnetotacticum MS-1] Length = 315 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 134/311 (43%), Positives = 183/311 (58%), Gaps = 4/311 (1%) Query: 1 MEKK--PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLT 56 M K RIGTR SPLALA ETR L I I + T GD I +R L Sbjct: 1 MTAKLPILRIGTRGSPLALAQTHETRDRLAAAWAPLGQEGAIDIEVIKTTGDLIQDRPLA 60 Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116 EIGGKGLFT+E+++ ++SG I AVHS KD+PT L G+ + LPRED+RD FIS A Sbjct: 61 EIGGKGLFTKELDEAMLSGRIHLAVHSMKDVPTLLPDGIVLPCILPREDVRDAFISLKAA 120 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 SL DL +V+GTSSLRR A +L R D+ V++FRG ++TRL KL+ A +LA AG+ Sbjct: 121 SLADLPQGAVVGTSSLRRGAQILHRRPDLKVVNFRGNVQTRLRKLDEGVVDATMLAMAGL 180 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 +RL + L+ +D P+ QGAI I ++ A + +N D++ V ERAF Sbjct: 181 RRLGLAGHVTSALSEDDMLPAVAQGAIGITCRADDEAAHAFLAALNCPDSFVRVAAERAF 240 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L LDGSC++ IA A G L F G++++ DG H SR+G+R DA +G+DAA+ + Sbjct: 241 LTRLDGSCRTPIAALAVLDGDHLSFRGLIVSPDGTAIHATSRSGSRSDAEAMGKDAAEEL 300 Query: 297 RFISNKNVFNF 307 ++ F+ Sbjct: 301 IKVAGPGFFDL 311 >gi|220904556|ref|YP_002479868.1| porphobilinogen deaminase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868855|gb|ACL49190.1| porphobilinogen deaminase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 310 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 159/305 (52%), Gaps = 3/305 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + I TR S LAL A +S L + P I + + TKGD I + L ++GGKG Sbjct: 2 RNTLTIATRGSRLALWQAEHVKSCLQAIR--PGLEIRLNVIKTKGDIILDVPLAKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L++GE D AVHS KD+P +L +GL + PRED D +SH S+ L Sbjct: 60 LFVKEIEEALLNGEADLAVHSMKDVPMELPEGLILGCVPPREDPTDCLLSHKYDSVAALP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ +GTSSLRR++ LL R D+ + RG ++TRL KL AI+LA AG+KRL Sbjct: 120 PNACVGTSSLRRQSQLLAQRPDLRIESLRGNVDTRLRKLQEGMYDAIILASAGLKRLGLS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 L+ F P+ GQGA+ IE N+ + L+ + T V ER FLA L+G Sbjct: 180 APHMHALDPHTFLPAVGQGALGIECRENDYELFTLLAEMEDSATRVCVEAERGFLAGLEG 239 Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG A TL G+V DG S++G+ A G + A I Sbjct: 240 GCQVPIAGHARLLDDDTLRLEGLVAEVDGSRILRCSKDGHTSQARRWGLELAGEILEQGG 299 Query: 302 KNVFN 306 K + Sbjct: 300 KGILE 304 >gi|291279209|ref|YP_003496044.1| porphobilinogen deaminase [Deferribacter desulfuricans SSM1] gi|290753911|dbj|BAI80288.1| porphobilinogen deaminase [Deferribacter desulfuricans SSM1] Length = 305 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 166/305 (54%), Gaps = 5/305 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K IGTR S LAL A +S + H ++ + + T GD+I + L +IGG Sbjct: 1 MNK--LVIGTRGSKLALWQANHIKSLIESTHH---IDVELKIIKTTGDKILDTPLAKIGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE++L++ +D AVHS KD+P +L GL++ + RE+ D F+S SL + Sbjct: 56 KGLFVKEIEEELLNKNVDIAVHSMKDVPVELPDGLEVGVFPVREEPYDAFLSVKYNSLDE 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSSLRRK L+R + + D RG ++TR+ KL + AI+LA AG+KRL Sbjct: 116 LPDGAVIGTSSLRRKIQLMRKYPHLVIKDLRGNVDTRIRKLTEGQYDAIILAKAGLKRLG 175 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + +K+ ++ P+ QG + IE ++ Q+++ +NHE+T ERAFL L Sbjct: 176 LLEHVKQTIDDTLMIPAVCQGTLGIEYREDDQDVQKVIGFLNHEETVFRTKAERAFLKRL 235 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ + A G L G + DG + G++ DA+ +G A+ I Sbjct: 236 EGGCQVPLGCIANLVGDRLILKGFLANLDGSKYIYEEIEGDKTDAVKLGLKLAKNILGQG 295 Query: 301 NKNVF 305 K + Sbjct: 296 GKEII 300 >gi|238018694|ref|ZP_04599120.1| hypothetical protein VEIDISOL_00538 [Veillonella dispar ATCC 17748] gi|237865165|gb|EEP66455.1| hypothetical protein VEIDISOL_00538 [Veillonella dispar ATCC 17748] Length = 319 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 108/301 (35%), Positives = 170/301 (56%), Gaps = 2/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + L ++ P + ++ +TKGDRI + L ++GGKGLFT Sbjct: 12 IRIGTRKSALALWQAEHISAELQRLY--PNITVELVHFNTKGDRILEKPLAQVGGKGLFT 69 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E+E+ + G+ID AVHS KDMPT+L +GL + A RE D +S ++L L + Sbjct: 70 AELEEAMHKGDIDIAVHSLKDMPTELPEGLTLGAISAREVPYDALVSPVYKTLDKLPEGA 129 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A LL R D+ V RG ++TRL+K+ K ++LA AG+KRL + I Sbjct: 130 CVGTSSLRRQAQLLHVRPDLKVEVIRGNVQTRLSKIETEKLDGVILAQAGLKRLGLDDQI 189 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ ++ P+ GQGA+ IE ++ + E++ IN E T +V ER+FL +L+G C+ Sbjct: 190 TQVFKADEMIPAVGQGALAIECRADDTEMLEMLAPINDEATRYAVEGERSFLRQLNGGCQ 249 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + L ++ + DGK +E +G A +G++ A+ + K++ Sbjct: 250 VPMGVHGTINKGQLILKAMIASLDGKTVYEGEISGPAKKAEILGKNLAKALYEEGGKHIV 309 Query: 306 N 306 + Sbjct: 310 D 310 >gi|153008310|ref|YP_001369525.1| porphobilinogen deaminase [Ochrobactrum anthropi ATCC 49188] gi|166217778|sp|A6WXJ2|HEM3_OCHA4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|151560198|gb|ABS13696.1| porphobilinogen deaminase [Ochrobactrum anthropi ATCC 49188] Length = 314 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 150/302 (49%), Positives = 196/302 (64%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IGTR S LALA A+ETR LM+ H +P I IIP+ST GDRI +R L+EIGGKGLF Sbjct: 10 TLKIGTRGSKLALAQAYETRRRLMEAHGLPEEAIEIIPMSTAGDRIQDRALSEIGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 TEEIE+ L G ID AVHS KDMPT L GL +S +L RED RD FI TA L DL Sbjct: 70 TEEIEQALTDGRIDLAVHSTKDMPTVLPDGLHLSVFLEREDPRDAFIGRTASRLLDLPQG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G+SSLRR+AL+ R R DI V+ FRG ++TRL KL + LA AG++RL V Sbjct: 130 ATVGSSSLRRQALIRRLRPDIQVVIFRGNVDTRLRKLEAGEVDGTFLACAGLRRLGLGDV 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I ++ + E FPP+PGQGAI IET + + + L+ + H +T ++ CERAFLA LDGSC Sbjct: 190 ITDLADPESFPPAPGQGAIGIETRIGDTRIDTLLAPLAHRETGIALACERAFLAALDGSC 249 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A G T+ F+G++L DG HE+ G +A IG +AA+++R + Sbjct: 250 RTPIAGLATVNGDTVSFHGMILKPDGSEAHEIKTEGPASNAAAIGTEAAEHLRAKAGPQF 309 Query: 305 FN 306 F Sbjct: 310 FE 311 >gi|148545465|ref|YP_001265567.1| porphobilinogen deaminase [Pseudomonas putida F1] gi|167008818|sp|A5VWX3|HEM3_PSEP1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|148509523|gb|ABQ76383.1| hydroxymethylbilane synthase [Pseudomonas putida F1] Length = 313 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H + ++P+ ++GD++ + L +IGG Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAHT--GLQVTLVPMVSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLET 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHVDTADRVIAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V G R A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRAAAEALGVQVAEDLLGQG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AEAIL 303 >gi|134300009|ref|YP_001113505.1| porphobilinogen deaminase [Desulfotomaculum reducens MI-1] gi|189028090|sp|A4J6H7|HEM3_DESRM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|134052709|gb|ABO50680.1| hydroxymethylbilane synthase [Desulfotomaculum reducens MI-1] Length = 309 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 106/304 (34%), Positives = 156/304 (51%), Gaps = 2/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +G+R S LAL L + P I + TKGD++ + L +IG KG Sbjct: 2 KHKITVGSRDSALALWQTRWVVEQLEK--QNPDVTFEITTMKTKGDKMLDVALAKIGDKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E ++ EID AVHS KDMPT L +GL I A R++ D IS + L +L Sbjct: 60 LFTKELEVAMLQKEIDFAVHSLKDMPTALPEGLIIGAVCKRDNPGDALISKDGRKLDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IGTSSLRR A LL +R D + RG + TR+ KL + + I+LA AGI R+ E Sbjct: 120 KGARIGTSSLRRCAQLLNYRPDFQLEALRGNLNTRMKKLVSEQLDGIILAAAGITRMGWE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +I EI+ + P+ GQGAI +E ++P+ L+K I H +T + ER+ L L+G Sbjct: 180 DMIAEIIPFQVCLPAVGQGAISVECREDDPEILNLLKGIEHTETKAATEAERSLLRYLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I + K + L +V DG A+ +G + A+ + + K Sbjct: 240 GCQVPIGAHSEVKNNRLMLTAVVATLDGTKVIRAQGENEVNKAVELGIEVAEKLMAMGGK 299 Query: 303 NVFN 306 + Sbjct: 300 KILE 303 >gi|317129820|ref|YP_004096102.1| porphobilinogen deaminase [Bacillus cellulosilyticus DSM 2522] gi|315474768|gb|ADU31371.1| porphobilinogen deaminase [Bacillus cellulosilyticus DSM 2522] Length = 310 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 167/305 (54%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LA+ L + + I + TKGD+I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSNLAMTQTKWVIEQLKSLGL--NYEFEIKEIVTKGDKILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIEK + GEID AVHS KD+P ++ G+ + A R D RD FIS++ + L DL Sbjct: 60 FVKEIEKAMYDGEIDIAVHSMKDLPAEIADGMAVGAIPKRVDPRDAFISNSGKGLMDLPA 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 S++GTSSLRR A +L R D+ + RG I+TRL K AI+LA AGI+R+ Sbjct: 120 GSIVGTSSLRRSAQVLAKRPDLEIQWIRGNIDTRLRKCREENFDAIILAAAGIERVGWTS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ E L E P+ GQGA+ IE ++ + L+ IN DT +V ERAFL ++G Sbjct: 180 DIVTEFLEPEVCLPAVGQGALGIECRADDKEVLALLAKINDSDTEKTVTAERAFLHTVEG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ +AG+A + + +V + DG+ S G D + IG++ AQ + Sbjct: 240 GCQVPVAGYATLQDNGEIALTALVGSPDGQQIFRESIAGT--DPVAIGKEVAQRMLKAGA 297 Query: 302 KNVFN 306 K V + Sbjct: 298 KKVLD 302 >gi|119475318|ref|ZP_01615671.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2143] gi|119451521|gb|EAW32754.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2143] Length = 313 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 110/308 (35%), Positives = 170/308 (55%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A ++ L H P ++ ++ ++T+GD++ + L +IGG Sbjct: 1 MPSNLVRIATRESPLALWQAEFIKAGLQAAH--PGLDVELLGMTTRGDKMLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL++S RED RD F+S+ +++ + Sbjct: 59 KGLFVKELETAMLEGRADIAVHSMKDVPMEFPEGLELSIICEREDPRDAFVSNHFKTVNE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L S +GTSSLRR+ L R D+++ID RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPLGSRVGTSSLRRQCQLRALRPDLNIIDLRGNVNTRLRKLDEGQYDAIILASAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I + + ++ P+ GQGA+ +E ++ + Q L+ +NH T V+ ERA L Sbjct: 179 MEQRIADPIAVDSSLPAGGQGAVGVEARSDDHRIQALLAPLNHRSTALRVSAERAMNLRL 238 Query: 241 DGSCKSAIAGFAYCK---GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 G C+ IA FA L G+V + DGK R A +G + A + Sbjct: 239 QGGCQVPIACFAELDIEGSGQLRLRGLVGSPDGKEILRCERQAKPEMAEALGIEVADNLL 298 Query: 298 FISNKNVF 305 + + Sbjct: 299 AQGAERIL 306 >gi|77920653|ref|YP_358468.1| porphobilinogen deaminase [Pelobacter carbinolicus DSM 2380] gi|123756552|sp|Q3A009|HEM3_PELCD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|77546736|gb|ABA90298.1| hydroxymethylbilane synthase [Pelobacter carbinolicus DSM 2380] Length = 315 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR S LAL A + L +H P ++V++P++TKGD+I + L ++GG Sbjct: 1 MSSSALRIGTRASRLALWQAEWVQQQLETLH--PGLSVVLVPITTKGDKILDVPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L G ID AVHS KD+P+ L GL + PRED RD ++ +S Sbjct: 59 KGLFVKEIEEALYDGSIDLAVHSMKDVPSVLPPGLILPCIPPREDPRDALVTPDGRSFAQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A LL R D+ ++ RG +ETRL K+ I+LA AG+KRL+ Sbjct: 119 LPQGARIGTSALRRQAQLLHRRPDLDIVSLRGNVETRLRKMEEEDMDGIVLAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I E L+++ P+ GQGA+ +E + + EL+ ++ DT +V ERAFL L Sbjct: 179 LAERIAEYLSVDVSLPAIGQGALGLECREGDDRTLELIAPLHDADTAVAVRAERAFLRRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ +A A TL G+V DG + + A +G A+ + Sbjct: 239 NGGCQVPLAAHATVAEQTLTMVGLVAEVDGGSLIKETLAAPVAQAEAVGCQLAETLLARG 298 Query: 301 NKNVF 305 + Sbjct: 299 ADRIL 303 >gi|254713697|ref|ZP_05175508.1| porphobilinogen deaminase [Brucella ceti M644/93/1] gi|254715953|ref|ZP_05177764.1| porphobilinogen deaminase [Brucella ceti M13/05/1] gi|261217716|ref|ZP_05931997.1| porphobilinogen deaminase [Brucella ceti M13/05/1] gi|261321437|ref|ZP_05960634.1| porphobilinogen deaminase [Brucella ceti M644/93/1] gi|260922805|gb|EEX89373.1| porphobilinogen deaminase [Brucella ceti M13/05/1] gi|261294127|gb|EEX97623.1| porphobilinogen deaminase [Brucella ceti M644/93/1] Length = 314 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 143/302 (47%), Positives = 197/302 (65%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLF Sbjct: 10 TLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 TEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL Sbjct: 70 TEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL V Sbjct: 130 ATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADV 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC Sbjct: 190 ITDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 249 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + Sbjct: 250 RTPIAGLATVEGDRLSFQGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHF 309 Query: 305 FN 306 F+ Sbjct: 310 FD 311 >gi|253699058|ref|YP_003020247.1| porphobilinogen deaminase [Geobacter sp. M21] gi|259647798|sp|C6DYY8|HEM3_GEOSM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|251773908|gb|ACT16489.1| porphobilinogen deaminase [Geobacter sp. M21] Length = 318 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 166/305 (54%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A +S L + P + + + T GD+I + L ++GG Sbjct: 1 MALKELRIGTRASQLALWQANWVKSELEK--RYPDMTVTLTKIKTIGDKILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD IS+ + D Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISNNVK-FAD 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A LL+ R D+ ++ RG ++TR++KL A++LA AG+ RL Sbjct: 118 LPQGARIGTSALRRQAQLLKVRPDLEMVIIRGNVQTRMDKLKTEGLDAVILAAAGLNRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E+L + P+ GQGA+ IE +++N ++ + NH DT +V ERA L Sbjct: 178 FADQITELLPTDLSLPAIGQGALGIECNLSNQDVKDAISFFNHPDTSRAVRAERALLWRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA F G L G + + DGK+ + G D +G A+ + Sbjct: 238 EGGCQVPIAAFGEVTGDELKLTGFIASVDGKVSVKGVVTGPADDCEKLGVKLAEQLLSEG 297 Query: 301 NKNVF 305 + Sbjct: 298 GHAIL 302 >gi|294851125|ref|ZP_06791798.1| porphobilinogen deaminase [Brucella sp. NVSL 07-0026] gi|294819714|gb|EFG36713.1| porphobilinogen deaminase [Brucella sp. NVSL 07-0026] Length = 314 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 143/302 (47%), Positives = 197/302 (65%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLF Sbjct: 10 TLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 TEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL Sbjct: 70 TEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL V Sbjct: 130 ATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADV 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC Sbjct: 190 ITDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 249 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + Sbjct: 250 RTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGSHF 309 Query: 305 FN 306 F+ Sbjct: 310 FD 311 >gi|332975659|gb|EGK12548.1| porphobilinogen deaminase [Psychrobacter sp. 1501(2011)] Length = 339 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 103/321 (32%), Positives = 169/321 (52%), Gaps = 21/321 (6%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR SPLA+ A +S L ++ P + ++ + T+GD+I + L +IGGKGL Sbjct: 11 KTLNIATRKSPLAMWQAEHIKSRLESLY--PELEVNLVTMVTQGDKILDTPLAKIGGKGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ L G D AVHS KD+P +L +GL + Y RE D F+S+ L+DL Sbjct: 69 FVKELEQALYDGRADIAVHSLKDVPMQLPEGLILGTYCKRETPTDAFVSNNYDKLEDLPE 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GT+SLRR+ + +R D+ + RG ++TRL+KL+ + AI+LA +G+KR++ + Sbjct: 129 GAVVGTASLRRQCQIKAFRPDLQIKSLRGNVQTRLSKLDAGEYDAIILATSGLKRVELSE 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 IK+ ++I+ P+ GQGA+ IE ++ EL+K +N + ERA L+G Sbjct: 189 RIKQEIDIDISLPAVGQGALAIECRSDDEAVLELLKPLNDGQARIRLKAERALNRRLEGG 248 Query: 244 CKSAIAGFAYCKGS-----------TLYFYGIVLASDGKIFHEVSRN--------GNRCD 284 C+ IA +A + TL+ G V + DG + + Sbjct: 249 CQVPIAAYAVIEKDSEPSDQQIFQKTLWLRGRVGSEDGTTLLKAEKRIELSGDQAAREAQ 308 Query: 285 AINIGRDAAQYIRFISNKNVF 305 A +G + A + + ++ Sbjct: 309 AEQLGIEVADELLSLGADSIL 329 >gi|313496556|gb|ADR57922.1| HemC [Pseudomonas putida BIRD-1] Length = 313 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H + ++P+ ++GD++ + L +IGG Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAHT--GLQVTLVPMVSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHVDTADRVMAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V G R A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRAAAEALGVQVAEDLLGQG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AEAIL 303 >gi|288553611|ref|YP_003425546.1| porphobilinogen deaminase [Bacillus pseudofirmus OF4] gi|288544771|gb|ADC48654.1| porphobilinogen deaminase [Bacillus pseudofirmus OF4] Length = 310 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 174/305 (57%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + IG+R S LAL + L K P+N + + TKGDRI + TL+++GGKGL Sbjct: 2 RTIVIGSRRSNLALTQTDWVINQLKK--KEVPYNFEVKKIVTKGDRILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L + EID AVHS KD+P+ + +G ++A RED RD FIS LKDL Sbjct: 60 FVKEIEQALENKEIDIAVHSMKDVPSVMPEGFSLAAITEREDARDAFISLDHVKLKDLPS 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +++GTSSLRR A LL R D+ V RG +ETRL KL AI+LA AG+ RL E Sbjct: 120 GAIVGTSSLRRSAQLLAERPDLEVKWIRGNVETRLRKLKEEDFSAIILAAAGLNRLGYSE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +++ E L E P+ GQGA+ +E ++ + EL++ +N E T +V ER FL +++G Sbjct: 180 ELVTEYLEPEMCVPAVGQGALGLECRSDDQEVIELIQKLNDEATALTVTAERTFLHKMEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DGK + + G D + +G + ++ + Sbjct: 240 GCQVPIAGYATMQEDGQVSLTALVGSPDGKTILKDTVVG--QDPVKVGEEVSERLLEKGA 297 Query: 302 KNVFN 306 K + + Sbjct: 298 KEILD 302 >gi|26986930|ref|NP_742355.1| porphobilinogen deaminase [Pseudomonas putida KT2440] gi|38258017|sp|Q88RE5|HEM3_PSEPK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|24981540|gb|AAN65819.1|AE016210_7 porphobilinogen deaminase [Pseudomonas putida KT2440] Length = 313 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H + ++P+ ++GD++ + L +IGG Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAHT--GLQVTLVPMVSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHVDTADRVIAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V G R A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRAAAEALGVQVAEDLLGQG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AEAIL 303 >gi|30248604|ref|NP_840674.1| porphobilinogen deaminase [Nitrosomonas europaea ATCC 19718] gi|39931498|sp|Q82WS2|HEM3_NITEU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|30180199|emb|CAD84501.1| Porphobilinogen deaminase [Nitrosomonas europaea ATCC 19718] Length = 308 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 113/304 (37%), Positives = 163/304 (53%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K I +R S LAL A R L++++ P +I I+ ++TKGD+I + +L++IGGK Sbjct: 3 SPKKIVIASRESQLALWQANFIRGRLLELY--PQTDITILGMTTKGDQILDVSLSKIGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L G D AVHS KD+P + G ++A RED RD F+S+ SL++L Sbjct: 61 GLFIKELELALEDGRADIAVHSMKDVPMIVPSGFTLAAITEREDPRDAFVSNDFSSLEEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SV+GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL+ Sbjct: 121 PAGSVVGTSSLRRESQLRARFPHLQVRPLRGNVQTRLRKLDEGEYSAIILAAAGLKRLEL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I +L E P+ GQGA+ IE N+P E +K ++H T V ERA L Sbjct: 181 GYRISMLLPPELSLPAVGQGALGIECRDNDPDMVEWMKPLHHAATACCVEAERAMSRMLG 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC+ + GFA L G V DG G +G+ AQ ++ Sbjct: 241 GSCQVPLGGFAEIFEDVLTLRGFVATPDGSRMIADKLCGKPESGEQVGQQLAQNLKAHGA 300 Query: 302 KNVF 305 + + Sbjct: 301 EEIL 304 >gi|22299189|ref|NP_682436.1| porphobilinogen deaminase [Thermosynechococcus elongatus BP-1] gi|39931549|sp|Q8DIE4|HEM3_THEEB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|22295371|dbj|BAC09198.1| porphobilinogen deaminase [Thermosynechococcus elongatus BP-1] Length = 320 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 105/308 (34%), Positives = 158/308 (51%), Gaps = 5/308 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +P RIG+R S LAL ++ L H+ ++ ++T+GD I + L +IG K Sbjct: 5 SSRPVRIGSRKSQLALVQTEWVQAQLQTHHR--DRAFEVVTMTTQGDNILDVALAKIGDK 62 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118 GLFT+E+E ++ GE D AVHS KD+PT+L GL ++A RED D + T ++ Sbjct: 63 GLFTKELELSMLRGETDLAVHSLKDLPTQLPDGLVLAAITEREDPADALVLGAKWTGHTI 122 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L +VIGTSSLRR A L + ++ D RG + TRL KL+ + A++LA AG++R Sbjct: 123 DTLPEGTVIGTSSLRRLAQLRHYYPHLTFKDVRGNLNTRLAKLDAGEYDALILAVAGLRR 182 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L I ++L + GQGA+ IE + LVK + H +T ERAFL Sbjct: 183 LGFGDRISQVLPATVSLYAVGQGALGIECRAEDADILALVKTLEHPETTARCLAERAFLR 242 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +L+G C+ I + L G+V + DG+ + S G+ A +G A +R Sbjct: 243 QLEGGCQVPIGVHTVIENGQLTLTGLVASLDGQRLVKDSLTGDVATAEELGTRLALKLRE 302 Query: 299 ISNKNVFN 306 + Sbjct: 303 QGASEILE 310 >gi|322421444|ref|YP_004200667.1| porphobilinogen deaminase [Geobacter sp. M18] gi|320127831|gb|ADW15391.1| porphobilinogen deaminase [Geobacter sp. M18] Length = 318 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 164/305 (53%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A +S L + P + + + T GD+I + L ++GG Sbjct: 1 MALKELRIGTRASQLALWQANWVKSELEK--RYPDMTVTLKKIKTIGDKILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD IS D Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISR-GVKFAD 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A LL+ R D+ ++ RG ++TR++KL A++LA AG+ RL Sbjct: 118 LPQGARIGTSALRRQAQLLKVRPDLEMVIIRGNVQTRMDKLETEGLDAVILAAAGLNRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E+L + P+ GQGA+ IE ++N + ++ + NH DT +V ERA L Sbjct: 178 FADQITELLPTDLSLPAIGQGALGIECSLSNEEVKDAISFFNHPDTSRAVRAERALLWRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA + G L G + + DGK+ + G + +G A+ + Sbjct: 238 EGGCQVPIAAYGEVTGDQLKLTGFIASVDGKVSVKGVVTGPADECEKLGVKLAEQLLSDG 297 Query: 301 NKNVF 305 + Sbjct: 298 GHAIL 302 >gi|92115224|ref|YP_575152.1| hydroxymethylbilane synthase [Chromohalobacter salexigens DSM 3043] gi|91798314|gb|ABE60453.1| hydroxymethylbilane synthase [Chromohalobacter salexigens DSM 3043] Length = 311 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 102/304 (33%), Positives = 160/304 (52%), Gaps = 4/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RI TR S LAL A ++ L+ +H P + ++ ++T+GD+I + L ++GGKGL Sbjct: 2 QTLRIATRQSRLALWQAEHVKARLLALH--PGLEVELVAMTTRGDKILDSPLAKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ L+ G D AVHS KD+P +GL +S L D F+S+ SL L Sbjct: 60 FVKELEEALLDGRADIAVHSMKDVPMHFPEGLGLSVILESGAPTDAFVSNDYASLDALPE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +GTSSLRR + R D+ V++ RG ++TRL KL+ + AI+LA +G++RL+ Sbjct: 120 GVRVGTSSLRRGLQVKEARPDLEVLNLRGNVQTRLGKLDGGEFEAIILATSGLQRLELGH 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + L E P+ GQGA+ IE ++ EL+ ++H T V ERA LDG Sbjct: 180 RITQELPPEVSLPACGQGALGIECRHDDESLLELLAPLDHPQTATRVRAERAMNTRLDGG 239 Query: 244 CKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ I G+A + TL+ +V DG G+ + +G A+ + Sbjct: 240 CQVPIGGYAVLEDGDRTLWLRALVGDPDGSRVLRAEGRGSADEPEALGVRIAESLLDQGA 299 Query: 302 KNVF 305 ++ Sbjct: 300 GDIL 303 >gi|212633296|ref|YP_002309821.1| porphobilinogen deaminase [Shewanella piezotolerans WP3] gi|212554780|gb|ACJ27234.1| Porphobilinogen deaminase [Shewanella piezotolerans WP3] Length = 294 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 104/290 (35%), Positives = 161/290 (55%), Gaps = 2/290 (0%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + A ++ L +H+ + ++P+STKGD I + L ++GGKGLF +E+E ++ Sbjct: 1 MWQAEFVKAELEKIHE--GLTVELLPMSTKGDIILDTPLAKVGGKGLFVKELEVAMLEDR 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 D AVHS KD+P +GL + RED RD F+S+ S+ +L +V+GTSSLRR+ Sbjct: 59 ADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNNFSSINELPQGAVVGTSSLRRQC 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 + R D+ + D RG + TRL KL+ AI+LA AG+KRLK E+ I ++ ED P Sbjct: 119 QIRAARPDLQIKDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLKLEERITSFISAEDSLP 178 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + GQGA+ IE ++ + + L+ + H +T V ERA L+G C+ I +A G Sbjct: 179 ANGQGAVGIECRTDDARVKALLAPLEHLETRQRVIAERAMNTRLEGGCQVPIGAYAEIDG 238 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 TL G+V DG E + +GN+ DA +G A+ + K + + Sbjct: 239 DTLSLRGLVGNPDGSQVIEAATSGNKNDAEQLGVALAEELLSKGAKTILD 288 >gi|269798482|ref|YP_003312382.1| porphobilinogen deaminase [Veillonella parvula DSM 2008] gi|282849932|ref|ZP_06259315.1| hydroxymethylbilane synthase [Veillonella parvula ATCC 17745] gi|269095111|gb|ACZ25102.1| porphobilinogen deaminase [Veillonella parvula DSM 2008] gi|282580369|gb|EFB85769.1| hydroxymethylbilane synthase [Veillonella parvula ATCC 17745] Length = 312 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 107/301 (35%), Positives = 169/301 (56%), Gaps = 2/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + L ++ P + ++ +TKGDRI + L ++GGKGLFT Sbjct: 5 IRIGTRKSALALWQAEHISAELQRLY--PNITVELVHFNTKGDRILEKPLAQVGGKGLFT 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E+E+ + +G+ID AVHS KDMPT+L +GL + A RE D +S ++L L + Sbjct: 63 AELEEAMHAGDIDIAVHSLKDMPTELPEGLTLGAISAREVPYDALVSPVYKTLDKLPQGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A LL R D+ V RG ++TRL+K+ K ++LA AG+KRL E I Sbjct: 123 RVGTSSLRRQAQLLHVRPDLKVEVIRGNVQTRLSKIETEKLDGVILAQAGLKRLGLEDQI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ ++ P+ GQGA+ IE ++ + +++ IN E T +V ER+FL +L+G C+ Sbjct: 183 TQVFKADEMIPAVGQGALAIECRADDTEMLDMLDPINDEATRYAVEGERSFLRQLNGGCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + L ++ + DGK +E +G +G++ A+ + K + Sbjct: 243 VPMGVHGTINKGQLTLKAMIASLDGKTVYEGEISGPAKKGEILGKNLAKALYEEGGKRIV 302 Query: 306 N 306 + Sbjct: 303 D 303 >gi|123965794|ref|YP_001010875.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9515] gi|158512730|sp|A2BVF7|HEM3_PROM5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123200160|gb|ABM71768.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9515] Length = 316 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +I +R S LA+ + L IP + I ++T+GD+I + L +IG Sbjct: 1 MTKLKLKIASRRSKLAMVQTLWVKEQLEK--NIPNLEVSIESMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117 KGLFT+E+E +++ G+ D AVHS KD+PT L GL++ RED D + + Sbjct: 59 KGLFTKELEAQMLIGKADIAVHSLKDLPTNLPDGLKLGCITKREDPSDALVVNKKNEIYQ 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L S++GTSSLRR A L ++ D RG + TR+ KL++ + I+LA AG+K Sbjct: 119 LESLPAGSIVGTSSLRRLAQLRYKFPYLNFKDIRGNVITRIEKLDSGEFDCIILAAAGLK 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL E I +I+ E + GQGA+ IE + + +++ V+ + + ER+FL Sbjct: 179 RLGFESRIHQIIPNEISLHAVGQGALGIECKSEDKEVLKIISVLEDKASSQKCLAERSFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + + + G+V + DGK + +GN +G+ A+ ++ Sbjct: 239 RELEGGCQVPIGVNSSIQNDEICLKGMVASIDGKKLIKDESSGNVKYPEEVGKKLAEKLK 298 Query: 298 FISNKNVF 305 + Sbjct: 299 LQGADKIL 306 >gi|166367009|ref|YP_001659282.1| porphobilinogen deaminase [Microcystis aeruginosa NIES-843] gi|166089382|dbj|BAG04090.1| porphobilinogen deaminase [Microcystis aeruginosa NIES-843] Length = 319 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 159/305 (52%), Gaps = 5/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + ++ L H P + +ST+GD+I + L +IG KGL Sbjct: 8 RSLRIGSRKSQLALVQTYWVQAELSKHH--PHRQFEVETMSTQGDKILDVALAKIGDKGL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKD 120 FT+E+E ++ ID AVHS KD+PT L +GL + R + D + + L Sbjct: 66 FTKELEVGMLDRSIDLAVHSLKDLPTNLPEGLILGCVTERVNPADALVVNSQNQDYQLDT 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG++RL Sbjct: 126 LPEGAVVGTSSLRRLAQLRYHYPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLERLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + +++ E + GQGA+ IE +P+ E++KV+ H + D ERAFL EL Sbjct: 186 LGDRVHQVIPAEISLHAVGQGALGIECRDADPEVLEVLKVLEHAPSRDRCYAERAFLREL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I + L G+V + DGK + S +G+ +GRD A +R Sbjct: 246 EGGCQVPIGVNTAIEDGILTLTGMVASLDGKRLIKDSVSGDPSHGEVLGRDLAHKVREAG 305 Query: 301 NKNVF 305 + Sbjct: 306 AGEIL 310 >gi|224370660|ref|YP_002604824.1| HemC [Desulfobacterium autotrophicum HRM2] gi|223693377|gb|ACN16660.1| HemC [Desulfobacterium autotrophicum HRM2] Length = 325 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 116/304 (38%), Positives = 161/304 (52%), Gaps = 2/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK +IGTR S LAL A + + D + P + I+ + T GD I +R L+ +GGKG Sbjct: 20 KKTIKIGTRGSKLALWQANHVKDRIED--QFPETEVEIMTIKTTGDMIVDRPLSMVGGKG 77 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIEK L+ ID AVHS KDMP +L GL I A RE+ DV IS+ SL DL Sbjct: 78 LFVKEIEKALLESTIDMAVHSMKDMPGELPPGLVIGAVPARENPFDVLISNNNLSLADLP 137 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IGTSSLRR + + R DI RG ++TRL KL + A LLA AG+ RL + Sbjct: 138 KGARIGTSSLRRASQIKHARPDIETASIRGNLDTRLKKLAAGEFDATLLAAAGLIRLGMK 197 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI + + P+ GQGA+CIE+ + ++ +NH +T V+ ERAFL LDG Sbjct: 198 TVITQYFDETIMIPAVGQGALCIESRQEDLDIAPVLAFLNHGETHTVVSGERAFLRRLDG 257 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC +A F + + G+V + DG+ + + G D G A+ + Sbjct: 258 SCHIPVACFGRLEDHRVILTGLVASEDGRTILKETVAGTPEDPQKAGIALAETLLSKGAD 317 Query: 303 NVFN 306 + Sbjct: 318 KILE 321 >gi|194477303|ref|YP_002049482.1| porphobilinogen deaminase [Paulinella chromatophora] gi|171192310|gb|ACB43272.1| porphobilinogen deaminase [Paulinella chromatophora] Length = 313 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 104/308 (33%), Positives = 153/308 (49%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ R L H P I I ++T+GD+I + L +IG Sbjct: 1 MVSSFLRIASRRSQLAMVQTHWVRDQLAQAH--PSLEITIETMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS--- 117 KGLFT+E+E +++ D AVHS KD+PT L GL + RED D + + Sbjct: 59 KGLFTKELEAQMLVNRADIAVHSLKDLPTNLPDGLVLGCVTEREDPADALVINKKYQDRL 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L S++GTSSLRR A L + D RG + TRL KL++ + ++LA AG++ Sbjct: 119 LDTLPNGSIVGTSSLRRLAQLRHHFPHLVFKDIRGNVITRLEKLDSGEFDCLILAAAGLQ 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I EI++ + GQGA+ IE + + +KV+ H T ERAFL Sbjct: 179 RLGLGSRIHEIIDSSISLHAVGQGALGIECRDGDLDILKQIKVLEHAPTNYRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I KG+ L G+V + DGK G+ + +IG A ++ Sbjct: 239 RELEGGCQVPIGVNTRIKGNQLILTGMVASLDGKRLIRDEVYGDLINPEDIGIKLANILK 298 Query: 298 FISNKNVF 305 +++ Sbjct: 299 EQGAEDIL 306 >gi|289207199|ref|YP_003459265.1| porphobilinogen deaminase [Thioalkalivibrio sp. K90mix] gi|288942830|gb|ADC70529.1| porphobilinogen deaminase [Thioalkalivibrio sp. K90mix] Length = 315 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 115/292 (39%), Positives = 161/292 (55%), Gaps = 2/292 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 KP RI TR SPLA+ A + L +H P + ++ ++T+GDR+ + L IGGKGL Sbjct: 2 KPLRIATRKSPLAMWQAEHVAARLRGLH--PDLPVELVGMTTQGDRVLDSPLARIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++ D AVHS KD+P +L L + L RED D F+S+T + +L Sbjct: 60 FVKELEVAMLEDRADIAVHSVKDVPMELPADLVLPVILDREDPLDAFVSNTYAHVDELPQ 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +G+SSLRR+ L R D+ + D RG + TRL KL+ + AILLA AG+KRL ++ Sbjct: 120 GARVGSSSLRRQCQLRARRPDLKITDLRGNVNTRLGKLDAGEYDAILLAAAGLKRLGFDE 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L P+ GQGAI IE N+P+ L+ +N DT D V ERAF L+G Sbjct: 180 RIRARLEPAVSLPAVGQGAIAIECRENDPEIAALIAPLNDRDTSDRVRAERAFNRRLEGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 C+ +AG A G L G+V A DG G R DA +G A+ Sbjct: 240 CQVPLAGHATLDGDRLRLDGLVGAVDGSQLLRRQVEGPRGDAEALGVQLAEQ 291 >gi|33861052|ref|NP_892613.1| porphobilinogen deaminase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|39931394|sp|Q7V2I1|HEM3_PROMP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|33639784|emb|CAE18954.1| Porphobilinogen deaminase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 316 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 97/308 (31%), Positives = 157/308 (50%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +I +R S LA+ + L IP + I ++T+GD+I + L +IG Sbjct: 1 MTKFKLKIASRRSKLAMVQTLWVKEQLEK--NIPDLEVSIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS--- 117 KGLFT+E+E +++ G D AVHS KD+PT L GL + RED D + + Sbjct: 59 KGLFTKELEAQMLVGHADIAVHSLKDLPTNLPDGLTLGCITKREDPSDALVVNKKNKIYQ 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L S++GTSSLRR A L + D RG + TR+ KL++ + I+LA AG+K Sbjct: 119 LESLPPGSIVGTSSLRRLAQLRYKFPHLDFKDIRGNVITRIEKLDSGEFDCIILAAAGLK 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL E + +I+ E + GQGA+ IE ++ + +++ V+ + + ER+FL Sbjct: 179 RLGFESRVHQIIPNEISLHAVGQGALGIECKSDDKEVLKIISVLEDKVSSQRCLAERSFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + + + G+V + DGK + GN +G+ A+ ++ Sbjct: 239 RELEGGCQVPIGVNSSIQNDEIALIGMVASIDGKRLIKNESIGNIKYPEEVGKKLAEKLK 298 Query: 298 FISNKNVF 305 + Sbjct: 299 LQGADKIL 306 >gi|159026408|emb|CAO88937.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 319 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 159/305 (52%), Gaps = 5/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + ++ L H P + +ST+GD+I + L +IG KGL Sbjct: 8 RSLRIGSRKSQLALVQTYWVQAELSKHH--PHRQFEVETMSTQGDKILDVALAKIGDKGL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKD 120 FT+E+E ++ ID AVHS KD+PT L +GL + R + D + + L Sbjct: 66 FTKELEVGMLDRSIDLAVHSLKDLPTNLPEGLILGCVTERVNPADALVVNSENQDYQLDT 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG++RL Sbjct: 126 LPEGAVVGTSSLRRLAQLRYHYPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLERLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + +++ E + GQGA+ IE +P+ E++KV+ H + D ERAFL EL Sbjct: 186 LGDRVHQVIPAEISLHAVGQGALGIECRDADPEVLEVLKVLEHAPSRDRCYAERAFLREL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I + L G+V + DGK + S +G+ +GRD A +R Sbjct: 246 EGGCQVPIGVNTAIEDGILTLTGMVASLDGKRLIKDSVSGDPSHGEVLGRDLAHKVRDAG 305 Query: 301 NKNVF 305 + Sbjct: 306 AGEIL 310 >gi|113952874|ref|YP_731239.1| porphobilinogen deaminase [Synechococcus sp. CC9311] gi|122945597|sp|Q0I8I3|HEM3_SYNS3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|113880225|gb|ABI45183.1| porphobilinogen deaminase [Synechococcus sp. CC9311] Length = 316 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 103/309 (33%), Positives = 158/309 (51%), Gaps = 5/309 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALEHLRIASRRSQLAMVQTNWVKAELEKAH--PGLAISVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117 KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + ++ + Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNSKNAEYT 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L S++GTSSLRR A L + D RG + TRL KL++ ++LA AG+ Sbjct: 119 LETLPEGSIVGTSSLRRLAQLRYHYPHLQFKDVRGNVITRLEKLDSGNYDCLILAAAGLS 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I + + + GQGA+ IE + P+ EL++V+NH T ERAFL Sbjct: 179 RLGFGDRIHQSIPGNISLHAVGQGALGIECVCDRPEVMELIQVLNHAPTSARCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L+G C+ I +G T+ G+V + DGK + G D +GRD A ++ Sbjct: 239 RVLEGGCQVPIGVNTQIEGDTIQLTGMVASLDGKRLIRDEQAGPLADPEAVGRDLAHKLK 298 Query: 298 FISNKNVFN 306 + Sbjct: 299 DQGAGEILQ 307 >gi|254700531|ref|ZP_05162359.1| porphobilinogen deaminase [Brucella suis bv. 5 str. 513] gi|261751035|ref|ZP_05994744.1| porphobilinogen deaminase [Brucella suis bv. 5 str. 513] gi|261740788|gb|EEY28714.1| porphobilinogen deaminase [Brucella suis bv. 5 str. 513] Length = 314 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 142/302 (47%), Positives = 196/302 (64%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IG R S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLF Sbjct: 10 TLKIGARGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 TEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL Sbjct: 70 TEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL V Sbjct: 130 ATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADV 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC Sbjct: 190 ITDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 249 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + Sbjct: 250 RTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHF 309 Query: 305 FN 306 F+ Sbjct: 310 FD 311 >gi|116075276|ref|ZP_01472536.1| porphobilinogen deaminase [Synechococcus sp. RS9916] gi|116067473|gb|EAU73227.1| porphobilinogen deaminase [Synechococcus sp. RS9916] Length = 316 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 107/308 (34%), Positives = 156/308 (50%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALEQLRIASRRSQLAMVQTNWVKAELEKAH--PGLAISVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117 KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALAVNAKNAQYK 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L SV+GTSSLRR A L + D RG + TRL KL++ + ++LA AG+ Sbjct: 119 LDTLPAGSVVGTSSLRRLAQLRHHYPHLEFKDVRGNVITRLEKLDSGEYDCLILAAAGLT 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +I+ E + GQGA+ IE +P+ EL+KV+ H T ER+FL Sbjct: 179 RLGFGDRIHQIIPSEISLHAVGQGALGIECVEGSPEVLELIKVLEHAPTAARCLAERSFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I G TL G+V + DGK +G DA IG+ A ++ Sbjct: 239 RELEGGCQVPIGVNTVIDGDTLTLTGMVASLDGKRLIRDQASGTTADAEAIGKQLADTLK 298 Query: 298 FISNKNVF 305 + Sbjct: 299 GQGAGEIL 306 >gi|320354663|ref|YP_004196002.1| hydroxymethylbilane synthase [Desulfobulbus propionicus DSM 2032] gi|320123165|gb|ADW18711.1| hydroxymethylbilane synthase [Desulfobulbus propionicus DSM 2032] Length = 319 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 112/301 (37%), Positives = 172/301 (57%), Gaps = 2/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+ + ++ + H P + ++ ++TKGDRI + L ++GGKGLF Sbjct: 5 LRIGTRASLLAVTQSTWVKTQIEQAH--PGTRVELVKITTKGDRILDVPLAKVGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++GE+D AVHS KD+PT+L +GL I RE D F+S T +L DL + Sbjct: 63 KEIEDALLAGEVDLAVHSMKDVPTELPEGLHIGVIPVRETPYDAFLSKTCTTLADLPQGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSSLRRK+ L+ R D+ ++D RG I+TRL KL+ AI+LA AG++RL E I Sbjct: 123 TIGTSSLRRKSQLMALRPDLDIVDLRGNIDTRLRKLDEGVYDAIILAGAGLRRLHLEHRI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +L P+ QGA+ IE ++ + + ++ ++H +T +V ERAFL L+G C+ Sbjct: 183 TALLEPTQMLPAISQGALGIELRQDDTELADGLRFLHHGETAVAVEAERAFLLRLEGGCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IA A ++ G++ + DG+ + + G A +G AQ + K + Sbjct: 243 VPIAAHATLDSGSVTLTGLIASVDGRQILKEATTGPAEQAARLGAQLAQTLLDRGGKAIL 302 Query: 306 N 306 + Sbjct: 303 D 303 >gi|33239945|ref|NP_874887.1| porphobilinogen deaminase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|39931408|sp|Q7VD89|HEM3_PROMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|33237471|gb|AAP99539.1| Porphobilinogen deaminase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 315 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 102/310 (32%), Positives = 158/310 (50%), Gaps = 5/310 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ + L P +I I ++T+GD+I + L +IG Sbjct: 1 MALDQVRIASRRSQLAMVQTNWVKEELEKA--CPSIDISIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS--- 117 KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + + Sbjct: 59 KGLFTKELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCITKREDPADALVVNKKYKNYQ 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L DL SV+GTSSLRR A L + D RG + TRL KL++ + ++LA AG+ Sbjct: 119 LNDLPEGSVVGTSSLRRLAQLRHHYPGLIFKDVRGNVITRLEKLDSGEYDCLILAAAGLT 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +++ E + GQGA+ IE + + +++KV+ H+++ ERAFL Sbjct: 179 RLGFGNRIHQLIPSEISLHAVGQGALGIECVKDKEEILQIIKVLEHKESSLRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + +G L G+V + DGK ++ G+ IG + A ++ Sbjct: 239 KELEGGCQVPIGVNSKIQGQELILTGMVASLDGKQLIRDTKTGSSMHPETIGIELANTLK 298 Query: 298 FISNKNVFNF 307 + Sbjct: 299 SQGAMEILEV 308 >gi|121997816|ref|YP_001002603.1| porphobilinogen deaminase [Halorhodospira halophila SL1] gi|229836112|sp|A1WVT9|HEM3_HALHL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|121589221|gb|ABM61801.1| hydroxymethylbilane synthase [Halorhodospira halophila SL1] Length = 310 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LA+ A + L +H P + ++P+ST+GD I ++ L IGG Sbjct: 1 MAAESLRIATRRSQLAMWQAEHIAAELQRLH--PGLEVELVPMSTRGDEILDQPLARIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ GE D AVHS KD+P +L +G ++A R D RD F+S+ L + Sbjct: 59 KGLFMKELEDGMLRGEADLAVHSMKDIPWRLPEGFDLAAVSDRADPRDAFVSNHYSDLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRR+ ++ R D+ + RG ++TRL KL++ AI+LA +G+ RL+ Sbjct: 119 LPHGARVGTASLRRQCQIMDRRPDLQIEVLRGNVQTRLRKLDDGVYDAIILAASGLDRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I L E P+ GQGA+ IE + + +LV+ +NHE T +N ER A L Sbjct: 179 LTHRIAGRLTPEQSLPAVGQGALGIECREGDERVMKLVEGLNHEATRIRINAERGMNARL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +GSC+ I G+A G ++ G+V A DG G +A N+GR + Sbjct: 239 EGSCQVPIGGYAELDGDEVHLRGLVGAIDGSEVIRGEIRGPAAEAENLGRQLGDDLLARG 298 Query: 301 NKNVF 305 + Sbjct: 299 ADRIL 303 >gi|197116806|ref|YP_002137233.1| porphobilinogen deaminase [Geobacter bemidjiensis Bem] gi|226706286|sp|B5EBG8|HEM3_GEOBB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|197086166|gb|ACH37437.1| hydroxymethylbilane synthase [Geobacter bemidjiensis Bem] Length = 318 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 164/305 (53%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A +S L + P + + + T GD+I + L ++GG Sbjct: 1 MALKELRIGTRASQLALWQANWVKSELEK--RYPDMTVTLTKIKTIGDKILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD IS+ D Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISN-GVKFAD 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A LL+ R D+ ++ RG ++TR++KL A++LA AG+ RL Sbjct: 118 LPQGARIGTSALRRQAQLLKVRPDLEMVIIRGNVQTRMDKLKTEGLDAVILAAAGLNRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E+L + P+ GQGA+ IE +++N ++ + N DT +V ERA L Sbjct: 178 FADQITEMLPTDLSLPAIGQGALGIECNLSNQDVKDAISFFNSPDTSRAVRAERALLWRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA F G L G + + DGK+ + G D +G A+ + Sbjct: 238 EGGCQVPIAAFGEVTGDQLKLTGFIASVDGKVSVKGVVTGPADDCEKLGVKLAEQLLSEG 297 Query: 301 NKNVF 305 + Sbjct: 298 GHAIL 302 >gi|254483263|ref|ZP_05096495.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2148] gi|214036486|gb|EEB77161.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2148] Length = 310 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 109/306 (35%), Positives = 160/306 (52%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A R +LM H P + ++ ++++GD++ + L ++GG Sbjct: 1 MPTRTLTIATRESPLALWQAEYVRDALMSAH--PRLEVNLLGMTSRGDQLLDVPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED D F+S+ +SL Sbjct: 59 KGLFVKELETALLDGSADIAVHSMKDVPMSFPEGLTLGVICEREDPTDAFVSNNFESLAQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ V RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRECQLRARRPDLQVKFLRGNVNTRLRKLDEGQYDAIILASAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I + ++++D P+ GQGA+ IE + EL++ ++H T V ERA L Sbjct: 179 FGERIADSISVDDSLPAGGQGAVGIELREGDGDVLELLQTVHHPLTAQRVIAERAMNQRL 238 Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ IA FA L G+V DG + DA N+G A + Sbjct: 239 NGGCQVPIACFAEYLDNGHLRLRGLVGRPDGSEVLRAEAISSPEDAENLGISVANELLVQ 298 Query: 300 SNKNVF 305 + Sbjct: 299 GAAAIL 304 >gi|323701815|ref|ZP_08113485.1| porphobilinogen deaminase [Desulfotomaculum nigrificans DSM 574] gi|323533119|gb|EGB22988.1| porphobilinogen deaminase [Desulfotomaculum nigrificans DSM 574] Length = 309 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 103/304 (33%), Positives = 159/304 (52%), Gaps = 2/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ ++G+R S LAL + L + P + I+ + TKGD++ + L +IG KG Sbjct: 2 KRKIKVGSRDSALALWQTRWVVAQLEQ--QNPHLSFEIVTMKTKGDKMLDVALAKIGDKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E +++ EID AVHS KDMPT L GL I A R++ D IS + L +L Sbjct: 60 LFTKELELAMLNKEIDFAVHSLKDMPTALPAGLTIGAVCKRDNPGDALISKDGRKLAELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IGTSSLRR A LL +R D + RG + TR+ K+ + + AI+LA AGI R+ Sbjct: 120 QGARIGTSSLRRCAQLLNYRPDFRLEALRGNLNTRMKKMASQQLDAIILAAAGIYRMGWS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +I EI+ P+ GQGAI +E ++ + +L++ + H+ T + + ER+ L L+G Sbjct: 180 DMIAEIIPFNVCLPAVGQGAIAVECREDDIEINQLLQGVEHQPTRVATDAERSLLRRLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I + L IV DG+ G A +G + A + + K Sbjct: 240 GCQVPIGAYGEVIEDRLSLQAIVATLDGQRLIRAQGEGALNQAEELGIEVADKLLSMGGK 299 Query: 303 NVFN 306 + Sbjct: 300 EILQ 303 >gi|148559606|ref|YP_001259712.1| porphobilinogen deaminase [Brucella ovis ATCC 25840] gi|166201494|sp|A5VSL5|HEM3_BRUO2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|148370863|gb|ABQ60842.1| porphobilinogen deaminase [Brucella ovis ATCC 25840] Length = 304 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 143/301 (47%), Positives = 197/301 (65%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT Sbjct: 1 MKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL + Sbjct: 61 EEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI Sbjct: 121 TVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+ Sbjct: 181 TDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSCR 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + F Sbjct: 241 TPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHFF 300 Query: 306 N 306 + Sbjct: 301 D 301 >gi|323141796|ref|ZP_08076663.1| hydroxymethylbilane synthase [Phascolarctobacterium sp. YIT 12067] gi|322413719|gb|EFY04571.1| hydroxymethylbilane synthase [Phascolarctobacterium sp. YIT 12067] Length = 306 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 113/303 (37%), Positives = 173/303 (57%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K IGTR S LAL + + L + P +V+ + TKGDRI + L +IGGKG Sbjct: 2 KAKLTIGTRQSLLALWQSNHIAALLRK--EYPECEVVLKKIVTKGDRILDVPLAQIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+EIE+ L+ G +D AVHS KDMPT L +GL ++A R ++ D F+S+ + ++L Sbjct: 60 LFTKEIEEDLLDGTVDLAVHSLKDMPTVLPEGLCLTAITERANVGDAFVSNKYATFEELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 L SV+GTSSLRRKA LL R D+ + D RG ++TRL KL+ AI+LA AG++RL Sbjct: 120 LGSVVGTSSLRRKAQLLAKRPDLEIRDLRGNVDTRLRKLDEGLYDAIILAAAGLERLGHG 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I ++ + P+ GQGA+ IE + + ++++ +N +T + + ERAFL L+G Sbjct: 180 DRISSLIPADVCLPAVGQGALAIEARTADKEVRDMLSFLNDLNTKQATDAERAFLGLLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I A +G + I+ A DG + NG DA+++G+ + + + Sbjct: 240 GCQVPIGVHADVEGENIRIEAIIAALDGSTILRDTINGKADDAVSLGQQLGKKMLAAGGQ 299 Query: 303 NVF 305 + Sbjct: 300 EIL 302 >gi|332701796|ref|ZP_08421884.1| Porphobilinogen deaminase [Desulfovibrio africanus str. Walvis Bay] gi|332551945|gb|EGJ48989.1| Porphobilinogen deaminase [Desulfovibrio africanus str. Walvis Bay] Length = 316 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 107/304 (35%), Positives = 161/304 (52%), Gaps = 2/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + I TR S LAL A +S L++ H + ++ L T+GD+I + L ++GGKG Sbjct: 2 RTKLTIATRGSMLALWQAEHVKSMLVERHS--GLEVELLMLKTQGDKILDVPLAKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L+ G D AVHS KD+PT+L +GL I RE+ D +S +L L Sbjct: 60 LFVKEIEEALLDGRADLAVHSMKDVPTELPEGLIIGVTPKREEPADALLSVRYDNLAALP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSS RR+A LL R D + RG + TRL KL + + AI+LA AG+ RL Sbjct: 120 EGAVIGTSSFRRQAQLLMRRPDFEIKMLRGNVNTRLRKLMDGEYDAIVLAMAGLNRLGLS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 E+L DF P+ QG + IE ++ + +++ ++H +T V ER FL L+G Sbjct: 180 APKMEVLGPPDFLPAVSQGVLGIEYRRDDAELADMLAFMDHPETRVRVQAERGFLTALEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+A +G + G+V DG+ R+ A +G A+ + + Sbjct: 240 GCQVPIAGYAEVRGDEVRLTGLVADLDGRRVIRRERSSPAGQAWELGETLAREVLDAGGR 299 Query: 303 NVFN 306 + Sbjct: 300 EILE 303 >gi|239827917|ref|YP_002950541.1| porphobilinogen deaminase [Geobacillus sp. WCH70] gi|259647799|sp|C5D5K7|HEM3_GEOSW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|239808210|gb|ACS25275.1| porphobilinogen deaminase [Geobacillus sp. WCH70] Length = 311 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 171/305 (56%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P + + TKGD+I + TL+++GGKGL Sbjct: 2 RKIIVGSRRSKLALTQTNWVIERLRQLGA--PFEFEVKEIVTKGDKIIDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE +++GEID AVHS KDMP L GL I PRED DV IS ++ +L Sbjct: 60 FVKEIEHAMLNGEIDMAVHSMKDMPAVLPDGLIIGCVPPREDHHDVLISKNKETFANLPS 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +++GTSSLRR A +L R D+ + RG I+TRL KL N AI+LA AG+ R+ Sbjct: 120 GAIVGTSSLRRSAQILAKRPDLKIKWIRGNIDTRLAKLQNEDYDAIILAAAGLVRMGWAR 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ + P+ GQGA+ +E N+ + +E ++ +N T +V ER FL +++G Sbjct: 180 DVITEYLSTDVCLPAVGQGALAVECRENDEELREWLQKLNDVHTERAVLAERVFLQQMEG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+AY + +V + DGK ++ + +G+ + +G +AA+ + Sbjct: 240 GCQVPIAGYAYIDDREDIVLTALVASPDGKEIYKETVSGS--NPEEVGTNAAKMLIERGA 297 Query: 302 KNVFN 306 K + + Sbjct: 298 KALID 302 >gi|284006594|emb|CBA71855.1| porphobilinogen deaminase [Arsenophonus nasoniae] Length = 297 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 147/290 (50%), Gaps = 2/290 (0%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + A ++ L H P I +IP+ST+GD + + L +IGGKGLF +E+E L+ Sbjct: 1 MWQAIFVKTQLEKHH--PTLTIELIPMSTQGDILLDTPLAKIGGKGLFVKELENALLENR 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 D AVHS KD+P L + A R D RD F+S+ SL L S+IGTSSLRR+ Sbjct: 59 ADIAVHSIKDIPATFPNNLGLMAICQRGDPRDAFVSNQYDSLDALPAGSIIGTSSLRRQC 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 L + + D RG + TRL+KL+N + I+LA AG+KRL E I+ L E P Sbjct: 119 QLRHTYPHLVIQDLRGNVGTRLSKLDNGQYDGIILAVAGLKRLNLETRIRMPLPPEHSLP 178 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + GQGAI IE +++ Q + ++H DT + ER L G C+ I +A + Sbjct: 179 AVGQGAIGIECRLDDHHTQHFLAPLHHHDTAICIQAERTVNNRLQGGCQVPIGSYAIWQN 238 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 ++ +V DG R+ DA + + A+ + K + N Sbjct: 239 KQIWLRALVGTPDGSQIIRGERSFKPEDAQQMSIELAEELLNNGAKQILN 288 >gi|254717954|ref|ZP_05179765.1| porphobilinogen deaminase [Brucella sp. 83/13] gi|265982897|ref|ZP_06095632.1| porphobilinogen deaminase [Brucella sp. 83/13] gi|306838958|ref|ZP_07471782.1| porphobilinogen deaminase [Brucella sp. NF 2653] gi|264661489|gb|EEZ31750.1| porphobilinogen deaminase [Brucella sp. 83/13] gi|306405961|gb|EFM62216.1| porphobilinogen deaminase [Brucella sp. NF 2653] Length = 314 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 142/302 (47%), Positives = 197/302 (65%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLF Sbjct: 10 TLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 TEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL Sbjct: 70 TEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +++G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL V Sbjct: 130 AIVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVGGTFLACAGLRRLGLADV 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC Sbjct: 190 ITDLLDPSVFPPAPGQGAIGIESRIGDERIDALLAPLAHRETQIALACERAFLGALDGSC 249 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A +G L F G++L DG+ HEV+ DA +G DAA +R ++ + Sbjct: 250 RTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEEAVSDAAALGTDAANRVRAMAGPHF 309 Query: 305 FN 306 F+ Sbjct: 310 FD 311 >gi|218781846|ref|YP_002433164.1| porphobilinogen deaminase [Desulfatibacillum alkenivorans AK-01] gi|218763230|gb|ACL05696.1| porphobilinogen deaminase [Desulfatibacillum alkenivorans AK-01] Length = 310 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 119/301 (39%), Positives = 167/301 (55%), Gaps = 2/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR SPLAL A + L + P ++ + TKGD+I + L ++GGKGLF Sbjct: 7 IKIGTRGSPLALWQAEHVAALLER--RNPNVKTELVVIKTKGDKILDVPLAKVGGKGLFV 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G D AVHS KD+P++ GL ++A + RED RD I A+ L DL ++ Sbjct: 65 KEIEESLLDGRTDMAVHSMKDVPSEFPPGLCLAAIMEREDPRDALICSRAKGLLDLPPNA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSSLRR A LL D+ + RG I TRL+KL + AI+LA AG+KR+ + + Sbjct: 125 KIGTSSLRRSAQLLALMPDLQIEPLRGNIGTRLDKLTSLNLDAIVLAAAGVKRMAMDDKV 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E + E P+ GQGA+ IE ++P A L + +NHE T V ERAFL LDG C+ Sbjct: 185 SEYIPEETVLPAVGQGAMGIEIREDDPVAGPLARALNHEPTQVIVTGERAFLKRLDGGCQ 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A KG L G++ DG S +G + DA +G A+ + K V Sbjct: 245 VPVAAHGRLKGDFLQLTGVIAGVDGTPIFRDSVSGKKEDAKELGVKLAEKLLNAGGKAVL 304 Query: 306 N 306 + Sbjct: 305 D 305 >gi|315645740|ref|ZP_07898864.1| porphobilinogen deaminase [Paenibacillus vortex V453] gi|315279218|gb|EFU42528.1| porphobilinogen deaminase [Paenibacillus vortex V453] Length = 318 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 110/314 (35%), Positives = 171/314 (54%), Gaps = 14/314 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +G+R S LAL + L + K ++ + + TKGDRI + TL+++GGK Sbjct: 2 RTIVVGSRQSALALTQTGQVIDDLKRLAKEHGLDYDFTVKKIVTKGDRILDVTLSKVGGK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +EIE+ ++ GEID AVHS KDMP+ L +GL A R+D RD IS +L DL Sbjct: 62 GLFVKEIEQAMLDGEIDMAVHSMKDMPSVLPEGLVSGAVPARKDPRDCLISKEGATLDDL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSSLRR + L +R D+ + RG I++R+ K+ + AI+LA AG++R+ Sbjct: 122 PQGAKVGTSSLRRSSQLKAYRPDLQIDWIRGNIDSRIRKMEEGEFQAIVLATAGLQRMGW 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I L +E P+ GQGA+ IE N+ + L+ + N E T +V ER FL+EL+ Sbjct: 182 EDRITSHLPVEISLPAVGQGALGIECRENDSELLHLLSLYNDEVTARTVAAERKFLSELN 241 Query: 242 GSCKSAIAGFAYCKG----------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 G C+ I +A K + + G+V + DG+I + S G D ++G + Sbjct: 242 GGCQVPIGAYAILKNVDTGDSRGEQNVIQLTGMVGSPDGEIILKESAEGT--DPESLGVE 299 Query: 292 AAQYIRFISNKNVF 305 A ++ + + Sbjct: 300 VAAKLKAKGAEKIL 313 >gi|296132653|ref|YP_003639900.1| porphobilinogen deaminase [Thermincola sp. JR] gi|296031231|gb|ADG81999.1| porphobilinogen deaminase [Thermincola potens JR] Length = 310 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 106/302 (35%), Positives = 162/302 (53%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +GTR S LA+ +L ++ P + I+ + T+GD+I + L +IG KGL Sbjct: 3 REIVVGTRDSALAMWQTNWVVDNLRKLN--PDYTFKIVSMKTQGDKILDVALAKIGDKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E ++ EID AVHS KD+PT L +GL+I A R D RDV ++ LKD+ Sbjct: 61 FTKELEFAMLRNEIDLAVHSMKDLPTVLPEGLKIGAICERHDPRDVLVARDGILLKDMPQ 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSSLRR A LL++R D+ +I RG + TR+ KL I+LA AGI+RL Sbjct: 121 GARIGTSSLRRTAQLLKYRPDLQIISLRGNLNTRMAKLERENLDGIILAAAGIERLGWAY 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + E P+ GQG+I IE + + +V +NH + ++ ERA L +L+G Sbjct: 181 RITQRIPFEVCLPAVGQGSIGIEIREGDEEVSRIVDKLNHGPSAAAITAERAMLKKLEGG 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I +G L G+V + DGK G +A ++G A+ + + Sbjct: 241 CQIPIGALGRVEGDRLTLEGVVASLDGKELLRSRVEGPASEAASLGVALAEKLLDMGALE 300 Query: 304 VF 305 + Sbjct: 301 IL 302 >gi|297583719|ref|YP_003699499.1| porphobilinogen deaminase [Bacillus selenitireducens MLS10] gi|297142176|gb|ADH98933.1| porphobilinogen deaminase [Bacillus selenitireducens MLS10] Length = 312 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 109/306 (35%), Positives = 174/306 (56%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LA+ S L + P I ++T+GD I + TL+++GGKG Sbjct: 2 TRTITLGSRRSNLAMTQTRWVISELEKLGL--PFQFEIKEITTRGDEILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ + +GEID AVHS KD+P+ +GL +++ R D RD IS++ ++L +L Sbjct: 60 LFVKEIEQAMHNGEIDMAVHSMKDVPSTRSEGLVLASVPKRYDPRDALISNSGKTLMELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S++GTSSLRR + +L R D+ + RG I+TRL K AI+LA AG++R+ Sbjct: 120 AGSIVGTSSLRRGSQVLAKRPDLEIQWIRGNIDTRLRKCREENFDAIILAAAGLERVGWT 179 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E ++ E L+ + P+ GQGA+ +E ++ + +EL+ INHE T +V ERAFL ++ Sbjct: 180 EDIVTEFLDPDLCLPAVGQGALGLECREDDYELRELLAHINHEQTAITVAAERAFLRTVE 239 Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A + ++ +V ++DGK + S G D IG + A+ I Sbjct: 240 GGCQVPIGAYATLDEQNQIHLTALVASTDGKQVFKESIIG--EDPEYIGTEVAERILRQG 297 Query: 301 NKNVFN 306 K V + Sbjct: 298 AKGVLD 303 >gi|289548019|ref|YP_003473007.1| porphobilinogen deaminase [Thermocrinis albus DSM 14484] gi|289181636|gb|ADC88880.1| porphobilinogen deaminase [Thermocrinis albus DSM 14484] Length = 300 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 122/301 (40%), Positives = 183/301 (60%), Gaps = 6/301 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + L D+ H + ++P++T GD+IT+ L +IGGKGLF Sbjct: 3 IRIGTRRSQLALWQANYVKRKLEDM----GHTVELVPITTTGDKITDAPLAKIGGKGLFV 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G+ID AVHS KD+PTKL GL + A RE DV IS Q L++L + Sbjct: 59 KEIEEALLRGDIDVAVHSLKDVPTKLPDGLTLGAITERELPYDVLISRDGQRLENLPTGA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRRK + R R D+ + D RG ++TR+ KL+ + AI+LAYAGI+R+ E I Sbjct: 119 VVGTSSLRRKVQIKRMRRDLVIKDLRGNVDTRIRKLDEGQYDAIVLAYAGIRRMGWENRI 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +IL EDF P+ GQG++ +E ++ K +E++ +++H ++ V ERAFL ++G C+ Sbjct: 179 VQIL--EDFIPAVGQGSMAVEIREDDEKIREVISLLDHRESRIRVEAERAFLEVMEGGCQ 236 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + A+ GS L+ G + +G+ F E GN A +GR+ A+ I +++ Sbjct: 237 VPMGAIAWLDGSRLFMKGFLSDLEGENFVEAYVEGNVEKAQLLGRELAEKILSQGGRSIL 296 Query: 306 N 306 Sbjct: 297 E 297 >gi|222087476|ref|YP_002546013.1| porphobilinogen deaminase [Agrobacterium radiobacter K84] gi|221724924|gb|ACM28080.1| porphobilinogen deaminase [Agrobacterium radiobacter K84] Length = 322 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 164/306 (53%), Positives = 214/306 (69%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A E R LM H +P I+ L+TKGDRI +RTL EIGG Sbjct: 14 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHGLPEEMFEIVALTTKGDRIADRTLAEIGG 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+KL SGE+D AVHSAKDM TKL +GL ++AYLPREDIRD I TA L + Sbjct: 74 KGLFTQELEEKLTSGELDFAVHSAKDMATKLPEGLALTAYLPREDIRDSVIGRTAPKLIE 133 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G++SLRR+AL+ R R DI+VI FRG ++TRL KL +A A LLA AG+KRL Sbjct: 134 LPHGATVGSASLRRQALIRRLRPDINVITFRGSVQTRLRKLEEGQADATLLAVAGLKRLG 193 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K VI +IL+ ++FPP+P QGAI IE+ + + + +L+ IN T+D V+CER FLA L Sbjct: 194 KVDVITDILDPDEFPPAPAQGAIGIESRIGDKRMNDLLAAINDSPTFDIVSCERGFLAAL 253 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG+A C+G + F+G++L DG+ H + GNR DA +G +A Q IR + Sbjct: 254 DGSCRTPIAGYAVCEGDHIRFFGMILTPDGQQVHTTTIEGNRRDAEALGTNAGQAIRAEA 313 Query: 301 NKNVFN 306 F Sbjct: 314 GSAFFE 319 >gi|114566228|ref|YP_753382.1| hydroxymethylbilane synthase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122318683|sp|Q0AZ43|HEM3_SYNWW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|114337163|gb|ABI68011.1| hydroxymethylbilane synthase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 306 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 123/302 (40%), Positives = 176/302 (58%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LAL A S L IP + I + T GD+I + L++IG KGL Sbjct: 2 RNLRLGTRGSQLALWQARHVASLLES--SIPDLKVEIKTIKTTGDKILDVALSKIGDKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EIEK+L+ GEID AVHS KD+P++L GL I+A L RED RDV +SH SL DL Sbjct: 60 FTKEIEKELLDGEIDIAVHSMKDLPSELPPGLCIAAVLEREDPRDVLLSHKNYSLADLPQ 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++IGTSSLRR A L WR D+ ++D RG +ETR+ K+ I+LA AG+KRL E+ Sbjct: 120 AALIGTSSLRRIAQLKAWRPDLQLVDMRGNVETRIRKMKEQDLDGIILACAGVKRLGLEE 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +I + L P+ GQG I +E + +L+ INH+D++ + ER FL EL G Sbjct: 180 MISDYLPAHLVLPAVGQGMIAVEARSDEQDVLKLLSRINHQDSFLAGQAERGFLHELGGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ +A A +G L+ G++ + DGK + S + + +A GR+ A+ + Sbjct: 240 CQVPVASLAELQGGQLHIRGLIASLDGKEKYSGSSDCSPPEAEEAGRELARSLLQQGGAA 299 Query: 304 VF 305 + Sbjct: 300 IL 301 >gi|148654060|ref|YP_001281153.1| porphobilinogen deaminase [Psychrobacter sp. PRwf-1] gi|148573144|gb|ABQ95203.1| porphobilinogen deaminase [Psychrobacter sp. PRwf-1] Length = 339 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 107/321 (33%), Positives = 168/321 (52%), Gaps = 21/321 (6%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR SPLA+ A ++ L ++ P + ++ + T+GD+I + L +IGGKGL Sbjct: 11 KTLNIATRKSPLAMWQAEHIKARLESLY--PDLEVNLVTMVTQGDKILDTPLAKIGGKGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ L G D AVHS KD+P L +GL + Y RE D F+S+T SL L Sbjct: 69 FVKELEQALYDGRADIAVHSLKDVPMVLPEGLILGTYCKRETPTDAFVSNTYDSLDALPQ 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GT+SLRR+ + R D+ + RG ++TRL+KL+ + AI+LA +G+KR++ Sbjct: 129 GAVVGTASLRRQCQIKAHRPDLIIKSLRGNVQTRLSKLDAGEYDAIILATSGLKRVELSD 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 IK+ ++I+ P+ GQGA+ IE ++ L+K +N + ERA L+G Sbjct: 189 RIKQEIDIDISLPAVGQGALAIECRSDDDAVLSLLKPLNDGQARIRLMAERALNRRLEGG 248 Query: 244 CKSAIAGFAYCK-----------GSTLYFYGIVLASDGKIFHEVSRN----GNRCD---- 284 C+ IA FA + TL+ G V + DG + + GN+ D Sbjct: 249 CQVPIAAFAVIEKGAENDDTGSHNKTLWLRGRVGSEDGTTLLKADKRIALMGNQADREAQ 308 Query: 285 AINIGRDAAQYIRFISNKNVF 305 A +G D A + + + Sbjct: 309 AEQLGIDVADELLSLGADGIL 329 >gi|85060344|ref|YP_456046.1| porphobilinogen deaminase [Sodalis glossinidius str. 'morsitans'] gi|84780864|dbj|BAE75641.1| porphobilinogen deaminase [Sodalis glossinidius str. 'morsitans'] Length = 320 Score = 372 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 154/305 (50%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ RI TR SPLAL A R L+ H P + ++PL T+GD + L ++GG Sbjct: 8 MQDNLLRITTRQSPLALWQAGYVRDELLRHH--PHLQVELVPLVTRGDITLDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+ GL + R+D RD F+S +L Sbjct: 66 KGLFIKELELALLEHRADIAVHSMKDVTVSFPAGLGLCVLCERDDPRDAFVSPRYANLDV 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ V D RG + TRL KL+ A++LA AG+KRL Sbjct: 126 LPPGAIVGTSSLRRQCQLRERRPDVIVHDLRGNVGTRLAKLDRGNFDAVILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++ D P+ GQGA+ IE +++ + L+ ++H +T V ERA A L Sbjct: 186 LEDRIRHAIDPADSLPAVGQGAVGIECRLDDARTLALLAPLHHRETSLRVGAERAMNARL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A G ++ +V + DG A +G A + Sbjct: 246 QGGCQVPIGSYAVLDGEEIWLRALVGSPDGTTVIRSEGRAPLAQAEQLGLRLADDLLNRG 305 Query: 301 NKNVF 305 + + Sbjct: 306 ARAIL 310 >gi|254515499|ref|ZP_05127559.1| porphobilinogen deaminase [gamma proteobacterium NOR5-3] gi|219675221|gb|EED31587.1| porphobilinogen deaminase [gamma proteobacterium NOR5-3] Length = 308 Score = 372 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 102/300 (34%), Positives = 166/300 (55%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR SPLAL A+ R +L+ +H P ++ ++ ++++GD+I + L ++GGKGLF Sbjct: 5 VVIATRESPLALWQAYFVRDTLLKMH--PGISVELLGMTSRGDQILDVPLAKVGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G AVHS KD+P + GL+++ RE+ D F+S+ ++L L + Sbjct: 63 KELETALLDGRAHIAVHSMKDVPMEFPDGLELAVICEREEPADAFVSNNYENLDALPPGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ L R D++V RG + TRL KL+ + AI+LA AG+ RL+ + I Sbjct: 123 VVGTSSLRRECQLRANRPDLTVRFLRGNVNTRLRKLDEGEYDAIILACAGLIRLEMGERI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + + + P+ GQGA+ IE ++ +EL+ ++H T + V ERA L G C+ Sbjct: 183 RARIPVTESLPAGGQGAVGIEIRSDDSATRELLAPLHHGPTAERVLAERALNRRLQGGCE 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IA +A +G L+ G+V DG G+R + +G A + + Sbjct: 243 VPIAAYAVHEGDQLWLRGLVGRPDGSNTLRADARGSRDNPEALGITVADALLEAGAAEIL 302 >gi|242278118|ref|YP_002990247.1| porphobilinogen deaminase [Desulfovibrio salexigens DSM 2638] gi|259647794|sp|C6BYB7|HEM3_DESAD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|242121012|gb|ACS78708.1| porphobilinogen deaminase [Desulfovibrio salexigens DSM 2638] Length = 308 Score = 372 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 110/303 (36%), Positives = 166/303 (54%), Gaps = 2/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + I TR S LAL A L + + P + ++ + TKGD+I + L ++GGKGL Sbjct: 2 RKITIATRGSKLALWQANHISDLLRE--EYPGIEVQLLKIKTKGDKILDVPLAKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+ G D AVHS KD+PT+L +GL++ PRE D +S SLKDL Sbjct: 60 FVKEIEEALLDGRADLAVHSMKDVPTELPEGLEVGIIPPREAETDTLLSVKYDSLKDLPA 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR++ +L R D+ + RG ++TR+ KL N + AI++A AG+ RLK Sbjct: 120 GAVVGTSSLRRQSQVLALRDDLKIESLRGNLDTRVGKLLNGEFDAIVVATAGLNRLKLSA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 EIL F P+ QGA+ IE + + + Q+++ ++ E T V ER FL LDG Sbjct: 180 PKSEILGPPTFLPAVAQGALGIEYRIEDTEIQDILAFLHDEMTARQVKAERGFLTGLDGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IA ++ + + G V DG + + G DA +IG A+ + K Sbjct: 240 CQVPIAAWSQLESDQVKLTGFVADIDGSSPIRMEKTGPAEDAWDIGLALAEEVLAAGAKE 299 Query: 304 VFN 306 + + Sbjct: 300 ILD 302 >gi|163782608|ref|ZP_02177605.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1] gi|159882181|gb|EDP75688.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1] Length = 303 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 112/300 (37%), Positives = 165/300 (55%), Gaps = 5/300 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A +S L + ++ ++T GD+I + L +IGGKGLF Sbjct: 3 VRIGTRKSKLALWQANFVKSFLEKK---WGVEVELVKITTTGDKILDSPLAKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G ID AVHS KD+P + +GL + A RE+ DV +S L +L + Sbjct: 60 KEIEQALMEGRIDLAVHSLKDVPMVIPEGLTLGAITEREEPHDVLLSRDGGKLLELREGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+ L R R D+ V RG ++TR+ KL AI+LAYAG+KR+ E + Sbjct: 120 KVGTSSLRRQVQLKRLRRDLEVEVLRGNVDTRVRKLKEGMYDAIILAYAGVKRMGYEDEV 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L + F P+ GQG++ IE + + L++ +NH ++ CERAFL L+G C+ Sbjct: 180 TEVL--DYFIPAVGQGSLAIEIREGDEETLRLIEPLNHPESRVRAECERAFLRRLEGGCQ 237 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 I FA KG+TL G + +G F E G +A +G A+ + + + Sbjct: 238 VPIGAFAQVKGNTLTVRGFISDLEGLKFIEGEEVGKPEEASELGERLAESLLQQGGERIL 297 >gi|162219161|ref|YP_747258.2| porphobilinogen deaminase [Nitrosomonas eutropha C91] Length = 308 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 112/304 (36%), Positives = 164/304 (53%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + I +R S LAL A RS L++++ P +I I+ ++TKGD+I + +L++IGGK Sbjct: 3 SPEKIVIASRESQLALWQANFIRSRLLELY--PQTDITILGMTTKGDQILDVSLSKIGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L G D AVHS KD+P + G +++A RED RD F+S+ SL++L Sbjct: 61 GLFIKELELALEDGRADIAVHSMKDVPMIVPSGFRLAAITEREDPRDAFVSNDFTSLEEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SV+GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL+ Sbjct: 121 PTGSVVGTSSLRRESQLRARFPHLQVRPLRGNVQTRLRKLDEGEYSAIILAAAGLKRLEL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I ++ E P+ GQGA+ IE N+P E +K ++H T V ERA L Sbjct: 181 GYRISMLIPPELSLPAVGQGALGIECRDNDPDMVEWMKPLHHATTAYCVEAERAMSRVLG 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC+ + GFA L G V DG G +G AQ ++ Sbjct: 241 GSCQVPLGGFAEIFEGVLTLRGFVATPDGSKIIADKLCGKPESGERVGEQLAQNLKTHGA 300 Query: 302 KNVF 305 + + Sbjct: 301 EEIL 304 >gi|168059289|ref|XP_001781636.1| predicted protein [Physcomitrella patens subsp. patens] gi|162666950|gb|EDQ53592.1| predicted protein [Physcomitrella patens subsp. patens] Length = 393 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 134/306 (43%), Positives = 187/306 (61%), Gaps = 4/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A++TR L H + I+ + T GD+I ++ L +IGGKGL Sbjct: 88 VRIGTRGSPLALAQAYQTRDKLKAAHPELAEEGALEIVIIKTTGDKILSQPLADIGGKGL 147 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L++G+ID AVHS KD+PT L +G + LPRED+RD FI SL +L Sbjct: 148 FTKEIDDALLNGDIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICPNYSSLAELPE 207 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+G++SLRR++ LL + V++FRG ++TRL KL+ A LLA AG+KRL + Sbjct: 208 GSVVGSASLRRQSQLLHKYPHLKVVNFRGNVQTRLRKLSEGTVQATLLALAGLKRLDMTE 267 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + IL+ +D P+ QGAI I + K +E + +NHEDT +V CERAFLA+LDGS Sbjct: 268 HVTTILDTDDMLPAIAQGAIGIACRTGDTKMEEYLSSLNHEDTRLAVACERAFLAKLDGS 327 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFISN 301 C++ IAG A F G+V +DGK E SR G+ D I + +DA Q + + Sbjct: 328 CRTPIAGLAQRTDDGCSFRGLVATTDGKQVLETSRKGSFFYDDMIALAQDAGQELISRAG 387 Query: 302 KNVFNF 307 + F + Sbjct: 388 PDFFEW 393 >gi|317969656|ref|ZP_07971046.1| porphobilinogen deaminase [Synechococcus sp. CB0205] Length = 317 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 104/309 (33%), Positives = 154/309 (49%), Gaps = 5/309 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ R L H I I ++T+GD+I + L +IG Sbjct: 1 MAGSQLRIASRRSQLAMVQTHWVRDELAKAHA--GLEITIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117 KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + H ++ Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVHEKHKDKT 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L +V+GTSSLRR A L ++ D RG + TRL KL++ + ++LA AG+ Sbjct: 119 LATLPEGAVVGTSSLRRLAQLRHHYPHLTFKDVRGNVITRLEKLDSGEFDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I E+++ + GQGA+ IE + K E +KV+ H T ERAFL Sbjct: 179 RLGLSDRIHELIDPSISLHAVGQGALGIECRDGDAKVLEQIKVLEHVPTARRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I +G L G+V + DGK G++ + +G D A ++ Sbjct: 239 RELEGGCQVPIGVNTRFEGDELVLTGMVASLDGKRLIRDQVQGDQTNPEALGIDLAHKLK 298 Query: 298 FISNKNVFN 306 + Sbjct: 299 AQGAGEILE 307 >gi|261405370|ref|YP_003241611.1| porphobilinogen deaminase [Paenibacillus sp. Y412MC10] gi|329928511|ref|ZP_08282379.1| hydroxymethylbilane synthase [Paenibacillus sp. HGF5] gi|261281833|gb|ACX63804.1| porphobilinogen deaminase [Paenibacillus sp. Y412MC10] gi|328937770|gb|EGG34178.1| hydroxymethylbilane synthase [Paenibacillus sp. HGF5] Length = 318 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 111/314 (35%), Positives = 168/314 (53%), Gaps = 14/314 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGK 61 + +G+R S LAL + L + K + + TKGDRI + TL+++GGK Sbjct: 2 RTIVVGSRQSALALTQTGQVIDDLKRLAKEHGLEYDFAVKKIVTKGDRILDVTLSKVGGK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +EIE+ +I GEID AVHS KDMP+ L +GL A R+D RD IS +L DL Sbjct: 62 GLFVKEIEQAMIDGEIDMAVHSMKDMPSVLPEGLVSGAVPARKDPRDCLISKEGTTLDDL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSSLRR + L +R D+ + RG I++R+ K+ + AI+LA AG++R+ Sbjct: 122 PQGAKVGTSSLRRSSQLKAYRPDLQIDWIRGNIDSRIRKMEEGEFQAIILATAGLQRMGW 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I L +E P+ GQGA+ IE N+ + L+ + N E T +V ER FL+EL+ Sbjct: 182 EDRITSYLPVEVSLPAVGQGALGIECRENDEELLHLLSLYNDEVTARTVAAERKFLSELN 241 Query: 242 GSCKSAIAGFAYCKG----------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 G C+ I +A K + + G+V + DG+I + S G D +G + Sbjct: 242 GGCQVPIGAYAVMKNVEAGDSRGEQNVIQLTGMVGSPDGEIVLKESAEGT--DPEALGVE 299 Query: 292 AAQYIRFISNKNVF 305 A ++ + + Sbjct: 300 VAAKLKAKGAEKIL 313 >gi|52081298|ref|YP_080089.1| porphobilinogen deaminase [Bacillus licheniformis ATCC 14580] gi|52786677|ref|YP_092506.1| porphobilinogen deaminase [Bacillus licheniformis ATCC 14580] gi|319647211|ref|ZP_08001433.1| porphobilinogen deaminase [Bacillus sp. BT1B_CT2] gi|81609014|sp|Q65GK1|HEM3_BACLD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|52004509|gb|AAU24451.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus licheniformis ATCC 14580] gi|52349179|gb|AAU41813.1| HemC [Bacillus licheniformis ATCC 14580] gi|317390558|gb|EFV71363.1| porphobilinogen deaminase [Bacillus sp. BT1B_CT2] Length = 313 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 119/305 (39%), Positives = 171/305 (56%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LA+ L +++ P I + TKGDRI + TL+++GGKGL Sbjct: 2 RNIIVGSRRSKLAMTQTKWVIKKLEELN--PDFTFEIKEIVTKGDRILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ ++SGEID AVHS KDMP+ L +GL + RED RDV IS Q L DL Sbjct: 60 FVKEIEQAMLSGEIDMAVHSMKDMPSVLPEGLMVGCIPKREDARDVLISKGRQKLADLKQ 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +V+GTSSLRR A LL+ R D+ + RG I+TRL KL AI+LA AG+ R+ + Sbjct: 120 GAVVGTSSLRRSAQLLQMRPDLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLSRMGWKD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L+ E P+ GQGA+ IE ++ + L +N T +V ERAFL ++G Sbjct: 180 DVVTEFLDPESCLPAVGQGALAIECRGSDEELLSLFSRLNDRYTQLTVTAERAFLHAMEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAGFA + + G+V + DGK + + G D +GR+ A + Sbjct: 240 GCQVPIAGFAKMDEDGVIELTGLVASPDGKTVYRETVKGK--DPEAVGRECAAVMSEKGA 297 Query: 302 KNVFN 306 K + + Sbjct: 298 KALID 302 >gi|138896211|ref|YP_001126664.1| porphobilinogen deaminase [Geobacillus thermodenitrificans NG80-2] gi|196250167|ref|ZP_03148861.1| porphobilinogen deaminase [Geobacillus sp. G11MC16] gi|158513835|sp|A4IRG5|HEM3_GEOTN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|134267724|gb|ABO67919.1| Porphobilinogen deaminase [Geobacillus thermodenitrificans NG80-2] gi|196210351|gb|EDY05116.1| porphobilinogen deaminase [Geobacillus sp. G11MC16] Length = 309 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 118/304 (38%), Positives = 174/304 (57%), Gaps = 5/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + L + P + + TKGDR+ + TL+++GGKGL Sbjct: 2 RNIVVGSRRSKLALTQTNWVINELKRLGA--PFTFEVKEIVTKGDRVLDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE ++++G ID AVHS KDMP L GL I + RED+RDV +S SL DL Sbjct: 60 FVKEIEHEMLTGGIDMAVHSMKDMPAVLPSGLVIGSVPRREDVRDVLVSKGNLSLSDLPS 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +VIGTSSLRR A LL +R D+++ RG I+TRL KL N AI+LA AG+ R+ + Sbjct: 120 GAVIGTSSLRRSAQLLAYRPDVTIKWIRGNIDTRLAKLKNEDYDAIVLAAAGLARMGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ + P+ GQGA+ +E ++ + +E + +N E T +V ERAFL +++G Sbjct: 180 DVISEYLSPDVCVPAVGQGALAVECREDDVELREWLSRLNDEQTERAVRAERAFLQQMEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+A K ++ +V + DGK ++ G D +GR AA + K Sbjct: 240 GCQVPIAGYAEVKEGMVHLTALVASPDGKEKYKEIVIG--ADPEEVGRQAAALLSEQGAK 297 Query: 303 NVFN 306 + Sbjct: 298 ELIE 301 >gi|86359485|ref|YP_471377.1| porphobilinogen deaminase [Rhizobium etli CFN 42] gi|86283587|gb|ABC92650.1| porphobilinogen deaminase protein [Rhizobium etli CFN 42] Length = 309 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 166/306 (54%), Positives = 216/306 (70%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A E R LM H + I+ L+TKGDRIT+R L EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHNLSEEMFEIVVLTTKGDRITDRPLAEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E+KL+SGE+D AVHSAKDMPT L GL +SAYLPREDIRD + TA L D Sbjct: 61 KGLFTEELEQKLVSGELDFAVHSAKDMPTHLPDGLHLSAYLPREDIRDAVVGRTAPKLID 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R DI+VI FRG +ETRL KL+ + A LLA AG+KRL Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVITFRGSVETRLRKLDEGQVDATLLALAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K +VI ++L+ + FPP+P QGAICIE+ V + K +L+ +N T+DSV+CERAFLA L Sbjct: 181 KVEVITDVLDPDTFPPAPAQGAICIESRVGDTKIDDLLAAVNDATTFDSVSCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R + Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300 Query: 301 NKNVFN 306 F+ Sbjct: 301 GSAFFD 306 >gi|159903036|ref|YP_001550380.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9211] gi|238058998|sp|A9BEB6|HEM3_PROM4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|159888212|gb|ABX08426.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9211] Length = 316 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 105/309 (33%), Positives = 161/309 (52%), Gaps = 5/309 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR S LA+ + L H P NI I ++T+GD+I + L +IG Sbjct: 1 MVLDQLRIATRRSKLAMVQTHWVKEQLEKAH--PGINISIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117 KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + + + Sbjct: 59 KGLFTKELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVNKSLKDKQ 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L +L +++GTSSLRR A L + D RG + TRL KL+ ++LA AG+ Sbjct: 119 LHELPPGTILGTSSLRRLAQLRHHYPHLIFKDVRGNLITRLEKLDAGAYDCLILAAAGLT 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL + +++ E + GQGA+ IE N P+ E++K + HE+T ER+FL Sbjct: 179 RLGFGDRVHQLIPCEISLHAVGQGALGIECVENKPEVLEIIKSLEHEETSQRCLSERSFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + G L G+V + DGK + S+ G++ + IG++ A ++ Sbjct: 239 RELEGGCQVPIGVNSQISGQDLILTGMVASLDGKKLIKDSKRGDKSNPELIGKELANELK 298 Query: 298 FISNKNVFN 306 + Sbjct: 299 SQGAMEILQ 307 >gi|302038053|ref|YP_003798375.1| porphobilinogen deaminase [Candidatus Nitrospira defluvii] gi|300606117|emb|CBK42450.1| Porphobilinogen deaminase [Candidatus Nitrospira defluvii] Length = 310 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 162/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +GTR S LA+ + ++ L ++ P I + + T GD+I + L +IGG Sbjct: 1 MNRSTLILGTRGSKLAVHQSQWVQARLQEL--APGLTISLQRIQTSGDKILDVPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE L+S EID AVHS KD+PT L +GL I PRED RD I+ L Sbjct: 59 KGLFVKEIEDALLSKEIDLAVHSMKDVPTALPEGLDILCVPPREDPRDALITRDGCRLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSSLRR+A LL +R D ++ RG ++TRL KL + AI+LA AG++RL Sbjct: 119 LKPGAKIGTSSLRRQAQLLHYRPDFTIEMLRGNLDTRLRKLREGQFDAIVLAAAGLRRLA 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I E L + P+ QGA+ IE ++ +EL+ H T +V ERA L L Sbjct: 179 WDAEITEYLPVHLSLPAIAQGALGIEARSDDTFVRELLSRFEHRPTRITVTAERALLHRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA A +G L G+V + DG+ G +A +G A+ + Sbjct: 239 EGGCQVPIAAHAALEGDRLTVDGLVASVDGRRVIRHQIQGPASEAQALGTKLAERLLADG 298 Query: 301 NKNVF 305 + Sbjct: 299 GDVIL 303 >gi|288818572|ref|YP_003432920.1| porphobilinogen deaminase [Hydrogenobacter thermophilus TK-6] gi|288787972|dbj|BAI69719.1| porphobilinogen deaminase [Hydrogenobacter thermophilus TK-6] gi|308752163|gb|ADO45646.1| porphobilinogen deaminase [Hydrogenobacter thermophilus TK-6] Length = 304 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 116/300 (38%), Positives = 174/300 (58%), Gaps = 6/300 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + L + H + ++ ++T GD+I + L +IGGKGLF Sbjct: 3 LRIGTRKSKLALWQANFVKEKLEKM----GHQVDLVHITTSGDKILDVPLAKIGGKGLFV 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ EID AVHS KD+P L +GL+I A RE+ DV IS L++L ++ Sbjct: 59 KEIEEALMKKEIDLAVHSLKDVPMNLPEGLKIGAVTERENPFDVLISKDHLPLEELPSNA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+ + R R D+ V RG ++TR+ KL+ HA++LAYAG+KR+ E I Sbjct: 119 KVGTSSLRRQVQIKRRRGDLRVEMLRGNVDTRIRKLDEGLYHAVILAYAGVKRMGLEDRI 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++L EDF P+ GQG++ IE ++ +E+V +H ++ CERAFL EL G C+ Sbjct: 179 TQVL--EDFIPAVGQGSLAIEIRQDDSAVEEIVSCFDHYESRLRAECERAFLRELQGGCQ 236 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 I +++ +G T++ G V +G F E R+G +A IG+ A + + Sbjct: 237 VPIGAYSWIEGDTIFIKGFVSDLEGIKFIEGMRSGEAKEAQQIGKSLAHDLLREGADQIL 296 >gi|218190145|gb|EEC72572.1| hypothetical protein OsI_06012 [Oryza sativa Indica Group] Length = 358 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 127/306 (41%), Positives = 182/306 (59%), Gaps = 5/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR L H + I+ + T GD I ++ L +IGGKGL Sbjct: 50 IRIGTRGSPLALAQAHETRDKLKAAHSELAEEGAVEIVIIKTTGDMILDKPLADIGGKGL 109 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L Sbjct: 110 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTASSLAELPA 169 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+G++SLRR++ +L + V++FRG ++TRL KL HA LLA AG+KRL + Sbjct: 170 GSVVGSASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLNMAE 229 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +L++++ P+ QGAI I ++ + +NHEDT +V CER FL+ LDG+ Sbjct: 230 TATSVLSVDEMLPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLAVACEREFLSVLDGN 289 Query: 244 CKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRC-D-AINIGRDAAQYIRFIS 300 C++ IA +A K F G++ + DG +E SR G+ D + +G+DA ++ + Sbjct: 290 CRTPIAAYASRDKDGNCSFRGLLASPDGSTVYETSRTGSYDFDIMVEMGKDAGHELKAKA 349 Query: 301 NKNVFN 306 F+ Sbjct: 350 GPGFFD 355 >gi|190893753|ref|YP_001980295.1| porphobilinogen deaminase [Rhizobium etli CIAT 652] gi|190699032|gb|ACE93117.1| porphobilinogen deaminase protein [Rhizobium etli CIAT 652] Length = 309 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 166/306 (54%), Positives = 217/306 (70%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A E R LM H +P I+ LSTKGDRIT+R+L EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEEMFEIVVLSTKGDRITDRSLAEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E+KL+SGE+D AVHSAKDMPT L GL +SAYLPREDIRD I TA L D Sbjct: 61 KGLFTEELEQKLVSGELDFAVHSAKDMPTHLPDGLHLSAYLPREDIRDAVIGRTAPKLID 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R DI+VI FRG +ETRL KL + A LLA AG+KRL Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVIIFRGSVETRLRKLEEGQVDATLLALAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K +V+ +IL+ + FPP+P QGAICIE+ + + + +L+ +N T+D+V+CERAFLA L Sbjct: 181 KVEVLTDILDPDTFPPAPAQGAICIESRIGDSRIDDLLAAVNDAATFDTVSCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R + Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300 Query: 301 NKNVFN 306 F+ Sbjct: 301 GSAFFD 306 >gi|115444475|ref|NP_001046017.1| Os02g0168800 [Oryza sativa Japonica Group] gi|75259105|sp|Q6H6D2|HEM3_ORYSJ RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase; Flags: Precursor gi|49388602|dbj|BAD25717.1| putative porphobilinogen deaminase [Oryza sativa Japonica Group] gi|113535548|dbj|BAF07931.1| Os02g0168800 [Oryza sativa Japonica Group] gi|222622259|gb|EEE56391.1| hypothetical protein OsJ_05540 [Oryza sativa Japonica Group] Length = 358 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 127/306 (41%), Positives = 181/306 (59%), Gaps = 5/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR L H + I+ + T GD I ++ L +IGGKGL Sbjct: 50 IRIGTRGSPLALAQAHETRDKLKAAHSELAEEGAVEIVIIKTTGDMILDKPLADIGGKGL 109 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L Sbjct: 110 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTASSLAELPA 169 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+G++SLRR++ +L + V++FRG ++TRL KL HA LLA AG+KRL + Sbjct: 170 GSVVGSASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLNMAE 229 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +L++++ P+ QGAI I ++ + +NHEDT +V CER FL+ LDG+ Sbjct: 230 TATSVLSVDEMLPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLAVACEREFLSVLDGN 289 Query: 244 CKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRC-D-AINIGRDAAQYIRFIS 300 C++ IA +A K F G++ + DG +E SR G D + +G+DA ++ + Sbjct: 290 CRTPIAAYASRDKDGNCSFRGLLASPDGSTVYETSRTGPYDFDIMVEMGKDAGHELKAKA 349 Query: 301 NKNVFN 306 F+ Sbjct: 350 GPGFFD 355 >gi|118581775|ref|YP_903025.1| porphobilinogen deaminase [Pelobacter propionicus DSM 2379] gi|158512569|sp|A1AUE7|HEM3_PELPD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|118504485|gb|ABL00968.1| porphobilinogen deaminase [Pelobacter propionicus DSM 2379] Length = 310 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 166/306 (54%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RIGTR S LAL A +S L + P + + + T GDRI + L ++GG Sbjct: 1 MPPRQLRIGTRASQLALWQANWVKSELEK--RYPAMEVTLTKIKTMGDRILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD +S A Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVVSR-AARFSH 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTS+LRR+A LL R D+ ++ RG +ETR+ KL+ A++LA AG+KRL Sbjct: 118 LPPGARVGTSALRRQAQLLHARPDLEMVTIRGNVETRIRKLDEENLDAVILAAAGLKRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + E L++E P+ GQGA+ IE +++P E + NH DT +V ERA L Sbjct: 178 LTQRVAEYLDVEFSIPAIGQGALGIECRLSDPVVTEAIAFFNHPDTSHAVRAERALLRRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IA +G L G++ A DG+ F +G ++G + A + Sbjct: 238 QGGCQVPIAAHGTIRGGELRLVGLIAAVDGREFVRDEISGPVDQCEHLGEELADRLLSRG 297 Query: 301 NKNVFN 306 + + Sbjct: 298 GRAILE 303 >gi|94969590|ref|YP_591638.1| porphobilinogen deaminase [Candidatus Koribacter versatilis Ellin345] gi|123256362|sp|Q1INI6|HEM3_ACIBL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|94551640|gb|ABF41564.1| hydroxymethylbilane synthase [Candidatus Koribacter versatilis Ellin345] Length = 311 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 103/302 (34%), Positives = 169/302 (55%), Gaps = 6/302 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIG+R S LAL A + L + H + + + T GD+I + L ++G KG+F Sbjct: 3 TLRIGSRGSQLALWQANHISALLRER----GHEVELEIIKTTGDKILDVALAKVGTKGMF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+EIE+ L +G++D AVHS KD+PT+L +G +++A RE+ RDVF+S S+ L Sbjct: 59 TKEIEEALAAGKVDVAVHSLKDLPTELPQGFELAAVTKRENPRDVFLSVKYDSISGLPQG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A + R D+ + RG ++TR+ KL + AI+LA+AG+ RL K ++ Sbjct: 119 AKVGTSSLRRQAQIKAIRPDLEIFPLRGNVDTRVRKLEQGEYDAIILAFAGLNRLGKTQL 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 +KEI++ + P+ GQGA+ IE + + + +E++ +N D + ERA L +L G C Sbjct: 179 VKEIISEDVMCPAAGQGALGIEIRLGDTRMREILSFLNDYDARATTTAERALLNQLGGGC 238 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I FA K ++ I DG S++G D ++G + + + + Sbjct: 239 QVPIGAFAEVKDGQVHLTAICARPDGSEILRESKSG--ADPAHLGEEVGKTLLARGATKI 296 Query: 305 FN 306 Sbjct: 297 LE 298 >gi|16330297|ref|NP_441025.1| porphobilinogen deaminase [Synechocystis sp. PCC 6803] gi|2495177|sp|P73660|HEM3_SYNY3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|1652786|dbj|BAA17705.1| porphobilinogen deaminase [Synechocystis sp. PCC 6803] Length = 320 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 103/304 (33%), Positives = 157/304 (51%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIG+R S LAL + + L P + + T+GD+I + L +IG KGLF Sbjct: 9 TVRIGSRKSQLALVQTYWVQEELQK--HFPDRQFDVETMETQGDKILDVALAKIGDKGLF 66 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKDL 121 T+E+E ++ D AVHS KD+PT L GL + R + D + H + L L Sbjct: 67 TQELEDGMLGKRTDLAVHSLKDLPTNLPAGLMLGCVTKRVNPADALVLNAKHQGKDLASL 126 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +VIGTSSLRR A L ++ D RG + TRL KL++N+ AI+LA AG++RL Sbjct: 127 PEGAVIGTSSLRRLAQLRYHFPHLTFKDVRGNVNTRLAKLDSNEYDAIILAAAGLERLDM 186 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I +++ E + GQGA+ IE + + L+KV+ E++ D ERAFL +L+ Sbjct: 187 ANRIDQLIPPEISLHAVGQGALGIECREGDQEILSLLKVLEDENSRDRCLAERAFLRQLE 246 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I + G L G+V + DG+ + + + R +A +G+D A +R Sbjct: 247 GGCQVPIGVNTHLDGDNLTLTGMVASLDGQRLIKDTLSAPRKEAEKLGQDLALKLREQGA 306 Query: 302 KNVF 305 + Sbjct: 307 GEIL 310 >gi|27117223|emb|CAD48146.1| porphobilinogen deaminase [Bacillus megaterium] Length = 310 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 119/305 (39%), Positives = 168/305 (55%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L P I + TKGD+I N TL+++GGKGL Sbjct: 2 RKIIVGSRRSKLALTQTKWVIEQLKKQGL--PFEFEIKEMVTKGDQILNVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ ++ EID AVHS KDMP L +GL I RED RD IS + ++L Sbjct: 60 FVKEIEQAMLDKEIDMAVHSMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELPS 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +VIGTSSLRR A LL RSDI + RG I+TRL KL N AI+LA AG+ R+ + Sbjct: 120 GAVIGTSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNEDYDAIILAAAGLSRMGWSK 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + L E P+ GQGA+ IE N+ + L++ +NH++T +V ER FL E++G Sbjct: 180 DTVTQYLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEMEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+ G + +V + DGK ++ G D I IG +AA+ + Sbjct: 240 GCQVPIAGYGRILDGGNIELTSLVASPDGKTIYKEHITGK--DPIAIGSEAAERLTSQGA 297 Query: 302 KNVFN 306 K + + Sbjct: 298 KLLID 302 >gi|261856741|ref|YP_003264024.1| porphobilinogen deaminase [Halothiobacillus neapolitanus c2] gi|261837210|gb|ACX96977.1| porphobilinogen deaminase [Halothiobacillus neapolitanus c2] Length = 319 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 102/301 (33%), Positives = 157/301 (52%), Gaps = 3/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLA+ L +H P + ++ ++TKGD++ + L +IGGKGLF Sbjct: 11 IRIATRESPLAMWQTEFVADELRRLH--PGLRVELVSMTTKGDQLLDSPLAKIGGKGLFV 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P + GL++ A L D RD F+S+ +SL L + Sbjct: 69 KELELALMDGRADIAVHSMKDVPMRFPDGLELIAILEGHDPRDAFVSNEYESLAALPAGA 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ + + + RG I++R+ KL+ AI+LA AG+KR+ + I Sbjct: 129 VVGTSSLRRETQIRSRYPQLEIKMLRGNIQSRMAKLDRGDYDAIILAAAGLKRMGYDARI 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L+ E+ PS GQGA+ IE ++ L+ + H T V ERAF L+G C+ Sbjct: 189 RAELSPEESLPSVGQGALGIEARSDDAAIHALIAPLIHAATTTRVLAERAFNTRLNGGCQ 248 Query: 246 SAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 I G+A + L+ G+V DG + G + +G A+ + + Sbjct: 249 VPIGGYAMLQDDGNLWLRGMVGRPDGTLTLRDEITGAATEGEALGVALAERMLAAGADKI 308 Query: 305 F 305 Sbjct: 309 L 309 >gi|114308050|gb|ABI59293.1| hydroxymethylbilane synthase [Nitrosomonas eutropha C91] Length = 334 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 112/304 (36%), Positives = 164/304 (53%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + I +R S LAL A RS L++++ P +I I+ ++TKGD+I + +L++IGGK Sbjct: 29 SPEKIVIASRESQLALWQANFIRSRLLELY--PQTDITILGMTTKGDQILDVSLSKIGGK 86 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L G D AVHS KD+P + G +++A RED RD F+S+ SL++L Sbjct: 87 GLFIKELELALEDGRADIAVHSMKDVPMIVPSGFRLAAITEREDPRDAFVSNDFTSLEEL 146 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SV+GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL+ Sbjct: 147 PTGSVVGTSSLRRESQLRARFPHLQVRPLRGNVQTRLRKLDEGEYSAIILAAAGLKRLEL 206 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I ++ E P+ GQGA+ IE N+P E +K ++H T V ERA L Sbjct: 207 GYRISMLIPPELSLPAVGQGALGIECRDNDPDMVEWMKPLHHATTAYCVEAERAMSRVLG 266 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC+ + GFA L G V DG G +G AQ ++ Sbjct: 267 GSCQVPLGGFAEIFEGVLTLRGFVATPDGSKIIADKLCGKPESGERVGEQLAQNLKTHGA 326 Query: 302 KNVF 305 + + Sbjct: 327 EEIL 330 >gi|159045244|ref|YP_001534038.1| porphobilinogen deaminase [Dinoroseobacter shibae DFL 12] gi|157913004|gb|ABV94437.1| porphobilinogen deaminase [Dinoroseobacter shibae DFL 12] Length = 347 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 127/303 (41%), Positives = 183/303 (60%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR S LALA A ETR+ L +P I+ + T GDRI +R+L+EIGGKGLF Sbjct: 40 PLKIGTRGSLLALAQAHETRARLSAAFDLPEEAFEIVVIKTTGDRIQDRSLSEIGGKGLF 99 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE ++ G ID AVHS KDMP GL + YLPRED+RD F++ +L DL Sbjct: 100 TREIEDAMLDGSIDIAVHSMKDMPVDTPAGLALDTYLPREDVRDAFVTLDGGTLADLPEG 159 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+G+SSLRR+A L R D+ +++FRG ++TR+ KL + AHA LA AG+ RL ++V Sbjct: 160 AVVGSSSLRRRAQLAHRRPDLQLVEFRGNVQTRMKKLGDGVAHATFLAMAGLNRLGMDEV 219 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + ED P+ QG I IE ++P+A E++ I+ + + CERA+L+ LDGSC Sbjct: 220 PRSAIAPEDMLPAVAQGCIGIERRADDPRAAEMLAAIHDGPSGHRLACERAYLSALDGSC 279 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A G +++ +L DG S DA +GR+ A+ +R + Sbjct: 280 QTPIAGLAELDGGSIHLRAEILRPDGSEVLSDSETAPVEDAAKMGREVAERLRARAPDGF 339 Query: 305 FNF 307 F++ Sbjct: 340 FSW 342 >gi|118602764|ref|YP_903979.1| porphobilinogen deaminase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|226740639|sp|A1AX51|HEM3_RUTMC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|118567703|gb|ABL02508.1| porphobilinogen deaminase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 304 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 105/303 (34%), Positives = 166/303 (54%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +I TR SPLAL A + L H P ++++ ++TKGD+I N L++IGGKG Sbjct: 2 NKTLKIATRQSPLALWQAQNVKIRLEKHH--PDLTVILVEMTTKGDQILNSPLSKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E ++ G D AVHS KD+P ++ +G ++ A L RE+ D F+S+ S+ DL Sbjct: 60 LFIKELEVSMMKGITDIAVHSMKDVPYEIPQGFKLGAILKRENPFDAFVSNDFSSIDDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ +GT S+RR L R D+ ++D RG + TRL KL+ I+LA AG+ RL E Sbjct: 120 QNAKVGTCSIRRIVQLKAIRPDLKILDLRGNVNTRLKKLDKGGFDGIILACAGLIRLGFE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 IK+ ++ + P+ GQG + IE N+ + +L+K + +T V+ ERA A L+G Sbjct: 180 SRIKQQISDQQSLPAVGQGVVGIEIRENDTEILDLIKPLIDVETTYMVSAERAMNARLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C IAGFA + G+V D + + + A +G + A + + K Sbjct: 240 GCSVPIAGFALIDNEQIMLTGLVGNVDTGVILKEQILSHVSQAEALGVELANKLISLGAK 299 Query: 303 NVF 305 ++ Sbjct: 300 DIL 302 >gi|194017264|ref|ZP_03055876.1| porphobilinogen deaminase [Bacillus pumilus ATCC 7061] gi|194011132|gb|EDW20702.1| porphobilinogen deaminase [Bacillus pumilus ATCC 7061] Length = 311 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 179/305 (58%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + ++G+R S LA+ L +++ P ++ I + TKGD+I + TL+++GGKGL Sbjct: 2 RTIKVGSRRSKLAITQTKWVIQKLSELN--PSYSFEIKEIVTKGDQILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ +++ +ID AVHS KDMP L +GL I RED+RD IS L +L Sbjct: 60 FVKEIEQAMLNHDIDMAVHSMKDMPAALPEGLVIGCIPEREDVRDALISKDHLRLHELPK 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +++GTSSLRR A LL+ R D+++ RG I+TRL KL N + AI+LA AG+ R+ + Sbjct: 120 GAIVGTSSLRRSAQLLQERPDLNIKWIRGNIDTRLEKLKNEEYDAIILAAAGLSRMGWSK 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +V+ E L+ E P+ GQGA+ IE ++ + +L+ +E T +V ERAFL ++DG Sbjct: 180 EVVSEFLSPETCLPAVGQGALSIECRGDDEELLQLLAQFTNEYTKKTVLAERAFLKQMDG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ IAG+A + G+V ++DG + +G+ D IG A+ + Sbjct: 240 SCQVPIAGYATINERDEIELTGLVASADGHTIIRETVSGS--DPEAIGTACAKQMADKGA 297 Query: 302 KNVFN 306 K++ + Sbjct: 298 KDLID 302 >gi|291288798|ref|YP_003505614.1| porphobilinogen deaminase [Denitrovibrio acetiphilus DSM 12809] gi|290885958|gb|ADD69658.1| porphobilinogen deaminase [Denitrovibrio acetiphilus DSM 12809] Length = 308 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 117/306 (38%), Positives = 171/306 (55%), Gaps = 5/306 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK I TR S LAL A+ TR L H + + + + TKGD+I + L +IGG Sbjct: 1 MEK--VVIATRGSNLALWQAYYTRDRLQKEHGV---EVELNIIKTKGDKILDVPLAKIGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ LI G+ D AVHS KD+P ++ +GL++ A D F+S + + Sbjct: 56 KGLFVKEIEQALIDGKADIAVHSMKDVPMEMPEGLELYASPEGASPYDCFVSVKYNEVVE 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRRK LL+ R D+ + D RG + TRL KL + I+LA AG+ RL+ Sbjct: 116 LPQGAVVGTSSLRRKLQLLKMRPDLVIKDLRGNVNTRLAKLEAGEFDGIVLAKAGLVRLE 175 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 VIKE + P+ QGA+ + N+ + +EL++ + T V+ ERAFL L Sbjct: 176 LGHVIKETFTADQMLPACCQGALGFQIRANDTRMKELLRFMKDPATETKVSMERAFLRRL 235 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C++ IAG + GS + GIV A DG+ F E G+ DA +G + A+ + Sbjct: 236 EGGCQAPIAGHSVLTGSKICMKGIVAALDGRTFIEQFIEGHAEDAEKLGLELAERVLNAG 295 Query: 301 NKNVFN 306 K++ Sbjct: 296 AKDILE 301 >gi|224826001|ref|ZP_03699104.1| porphobilinogen deaminase [Lutiella nitroferrum 2002] gi|224601638|gb|EEG07818.1| porphobilinogen deaminase [Lutiella nitroferrum 2002] Length = 311 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 108/297 (36%), Positives = 165/297 (55%), Gaps = 2/297 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A ++ L ++ P + I+ ++T+GD+I ++TL++IGGKGLF Sbjct: 3 KIVIASRESKLAMWQAEHIKARLEQLY--PQLAVEILGMTTQGDQILDKTLSKIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A RED RD F+S+T SL +L Sbjct: 61 VKELELALQEGRADLAVHSIKDVPMNLPEGFALAAICEREDPRDAFVSNTYASLSELPDG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR++ L +++ RG ++TRL KL++ + AI+LA AG+KRL+ Sbjct: 121 AVVGTSSLRRESQLRARFPRLTIKPLRGNVQTRLRKLDDGEFDAIILAAAGLKRLELSAR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ L + P+ GQGA+ IE + +L+ ++H DT V+ ERA L GSC Sbjct: 181 IRCELAPSESLPAVGQGALGIEIRADRADLMQLLAPLDHADTHACVSAERALSRVLGGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 + + GFA + G V DG + S + R A +GR AQ + Sbjct: 241 QIPLGGFATLSDDVITLGGFVAHPDGSVMLTASASAPREYADALGRAVAQKLLDAGA 297 >gi|33866317|ref|NP_897876.1| porphobilinogen deaminase [Synechococcus sp. WH 8102] gi|39931373|sp|Q7U5C2|HEM3_SYNPX RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|33639292|emb|CAE08300.1| Porphobilinogen deaminase [Synechococcus sp. WH 8102] Length = 317 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 105/313 (33%), Positives = 160/313 (51%), Gaps = 9/313 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLTITVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117 KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + + Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNAKNANHK 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L +V+GTSSLRR A L +S D RG + TRL KL++ ++LA AG++ Sbjct: 119 LDTLPEGAVVGTSSLRRLAQLRHHYPHLSFKDVRGNVITRLEKLDSGDYDCLILAAAGLE 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +I+ + + GQGA+ IE + P+ E++KV+ H T ERAFL Sbjct: 179 RLGFGNRIHQIIPGDISLHAVGQGALGIECVEDKPEVLEIIKVLEHTTTSRRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + L G+V + DGK +G+ D +IG + A ++ Sbjct: 239 RELEGGCQVPIGVNSQINNEELTLTGMVASLDGKRLIRDEASGSAADPESIGIELAGKLK 298 Query: 298 FISN----KNVFN 306 K +F+ Sbjct: 299 HQGAGAILKEIFD 311 >gi|209551271|ref|YP_002283188.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537027|gb|ACI56962.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 309 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 163/306 (53%), Positives = 217/306 (70%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A E R LM H +P I+ LSTKGDRIT+R+L EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEEMFEIVVLSTKGDRITDRSLAEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E++L +GE+D AVHSAKDMPTKL GL +SAYLPREDIRD I TA L D Sbjct: 61 KGLFTEELEQQLTTGELDFAVHSAKDMPTKLPDGLHLSAYLPREDIRDAVIGRTAPKLID 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R DI+V+ FRG +ETRL KL + A LLA AG+KRL Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVVTFRGLVETRLRKLEEGQVDATLLALAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K +V+ +IL+ + FPP+P QGAIC+E+ + + + +L+ +N T+D+V+CERAFLA L Sbjct: 181 KVEVLTDILDPDTFPPAPAQGAICLESRIGDTQIDDLLAPVNDAATFDTVSCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R + Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300 Query: 301 NKNVFN 306 F+ Sbjct: 301 GSAFFD 306 >gi|16079867|ref|NP_390693.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str. 168] gi|238054381|sp|P16616|HEM3_BACSU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|143037|gb|AAA22512.1| porphobilinogen deaminase [Bacillus subtilis] gi|2635280|emb|CAB14775.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus subtilis subsp. subtilis str. 168] Length = 314 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 168/305 (55%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGKGL Sbjct: 3 RTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFAFEIKEIVTKGDRIVDVTLSKVGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L++ EID AVHS KDMP L +GL I RED RD IS L ++ Sbjct: 61 FVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEMKK 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +VIGTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+ + Sbjct: 121 GAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKQ 180 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++G Sbjct: 181 DVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAMEG 240 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG++ G + G+V + DGKI + + GN D +G+ A + Sbjct: 241 GCQVPIAGYSVLNGQDEIEMTGLVASPDGKIIFKETVTGN--DPEEVGKRCAALMADKGA 298 Query: 302 KNVFN 306 K++ + Sbjct: 299 KDLID 303 >gi|294501421|ref|YP_003565121.1| porphobilinogen deaminase [Bacillus megaterium QM B1551] gi|294351358|gb|ADE71687.1| porphobilinogen deaminase [Bacillus megaterium QM B1551] Length = 310 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 117/305 (38%), Positives = 168/305 (55%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L P I + TKGD+I N TL+++GGKGL Sbjct: 2 RKIIVGSRRSKLALTQTKWVIEQLKKQGL--PFEFEIKEMVTKGDQILNVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ ++ EID AVHS KDMP L +GL I RED RD IS + ++L Sbjct: 60 FVKEIEQAMLDKEIDMAVHSMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELPS 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +VIGTSSLRR A LL RSDI + RG I+TRL KL N AI+LA AG+ R+ + Sbjct: 120 GAVIGTSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNEDYDAIILAAAGLSRMGWSK 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + L E P+ GQGA+ IE N+ + L++ +NH++T +V ER FL E++G Sbjct: 180 DTVTQYLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEMEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+ G + +V + DGK ++ G + + IG +AA+ + Sbjct: 240 GCQVPIAGYGRILDGGNIELTSLVASPDGKTIYKEHITGK--NPVAIGSEAAERLTSQGA 297 Query: 302 KNVFN 306 K + + Sbjct: 298 KLLID 302 >gi|157693217|ref|YP_001487679.1| porphobilinogen deaminase [Bacillus pumilus SAFR-032] gi|167008811|sp|A8FFV2|HEM3_BACP2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157681975|gb|ABV63119.1| hydroxymethylbilane synthase [Bacillus pumilus SAFR-032] Length = 311 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 178/305 (58%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + ++G+R S LA+ L +++ P ++ I + TKGD+I + TL+++GGKGL Sbjct: 2 RTIKVGSRRSKLAITQTKWVIQKLSELN--PSYSFEIKEIVTKGDQILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ +++ +ID AVHS KDMP L +GL I RED+RD IS L +L Sbjct: 60 FVKEIEQAMLNHDIDMAVHSMKDMPAALPEGLVIGCIPEREDVRDALISKDHLHLHELPK 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +++GTSSLRR A LL+ R D+++ RG I+TRL KL N + AI+LA AG+ R+ + Sbjct: 120 GAIVGTSSLRRSAQLLQERPDLNIKWIRGNIDTRLEKLKNEEYDAIILAAAGLSRMGWSK 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +V+ E L+ E P+ GQGA+ IE ++ + +L+ +E T +V ERAFL ++DG Sbjct: 180 EVVSEFLSPETCLPAVGQGALSIECRGDDEELLQLLAQFTNEYTKKTVLAERAFLKQMDG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ IAG+A + G+V ++DG + +G D IG A+ + Sbjct: 240 SCQVPIAGYATMNERDEIELTGLVASADGHTIIRETVSGT--DPEAIGTACAKQMADKGA 297 Query: 302 KNVFN 306 K++ + Sbjct: 298 KDLID 302 >gi|221310755|ref|ZP_03592602.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str. 168] gi|221315080|ref|ZP_03596885.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319999|ref|ZP_03601293.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str. JH642] gi|221324281|ref|ZP_03605575.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str. SMY] Length = 313 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 168/305 (55%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGKGL Sbjct: 2 RTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFAFEIKEIVTKGDRIVDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L++ EID AVHS KDMP L +GL I RED RD IS L ++ Sbjct: 60 FVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEMKK 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +VIGTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+ + Sbjct: 120 GAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKQ 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++G Sbjct: 180 DVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAMEG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG++ G + G+V + DGKI + + GN D +G+ A + Sbjct: 240 GCQVPIAGYSVLNGQDEIEMTGLVASPDGKIIFKETVTGN--DPEEVGKRCAALMADKGA 297 Query: 302 KNVFN 306 K++ + Sbjct: 298 KDLID 302 >gi|74318586|ref|YP_316326.1| porphobilinogen deaminase [Thiobacillus denitrificans ATCC 25259] gi|123772872|sp|Q3SFT5|HEM3_THIDA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|74058081|gb|AAZ98521.1| porphobilinogen deaminase [Thiobacillus denitrificans ATCC 25259] Length = 306 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 112/302 (37%), Positives = 160/302 (52%), Gaps = 2/302 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R L ++H P + I+ ++T+GD+I + TL++IGGKGLF Sbjct: 3 TLTIASRESALAMWQAEHIRDRLRELH--PECKVNILGMTTRGDQILDVTLSKIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L +GE D AVHS KD+P +L G +++ RED RD F+S+ L DL Sbjct: 61 VKELEVALAAGEADLAVHSMKDVPMELPPGFELAVIGEREDPRDAFVSNRYARLSDLPPG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SV+GTSSLRR+A L ++V RG + TRL KL+ + AILLA AG+KRL Sbjct: 121 SVVGTSSLRREAQLRARYPHLTVKPLRGNVGTRLKKLDEGQFDAILLAAAGLKRLGLGAR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 IK +L++E+ P+ GQGA+ IE N ++ +N T V ER L GSC Sbjct: 181 IKSLLSVEESIPAAGQGALGIEIRSGNTAVAAMLAPLNDPVTAACVRAERQVSRVLGGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + + A K L G V DG F G+ D +G+ A + + V Sbjct: 241 QVPLGAHASYKDGRLLLEGFVAKPDGSRFLVDRAEGDASDPEAVGQALADKLLAQGARAV 300 Query: 305 FN 306 + Sbjct: 301 LD 302 >gi|303274460|ref|XP_003056550.1| porphobilinogen deaminase, chloroplast precursor [Micromonas pusilla CCMP1545] gi|226462634|gb|EEH59926.1| porphobilinogen deaminase, chloroplast precursor [Micromonas pusilla CCMP1545] Length = 376 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 123/308 (39%), Positives = 181/308 (58%), Gaps = 4/308 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGG 60 + +IGTR SPLALA A+ TR L + I + T GD++ ++ L +IGG Sbjct: 60 EPIVKIGTRGSPLALAQAYMTRDLLKKNFVELSEEGALEICIIKTTGDKVLDQPLADIGG 119 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT E++ L+ G ID AVHS KD+PT L +G + LPRED+RD FIS L + Sbjct: 120 KGLFTRELDVALLDGRIDIAVHSMKDVPTYLPEGSILPCMLPREDVRDAFISVKYDDLSE 179 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT+SLRR++ LL + ++FRG +++R+ KL LLA AG+ R+ Sbjct: 180 LPDGALVGTASLRRQSQLLAKFPTLKCVNFRGNVQSRIRKLQEGVVDCTLLAIAGLNRMD 239 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + +IL + P+ QGAI I + + E ++ +NHE+T +V CERAFLA L Sbjct: 240 MTEHATKILETDVMLPAVAQGAIGIACRTGDSRQLEFLEKLNHEETRIAVECERAFLASL 299 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRF 298 DGSC++ IAG+AY G+ L F G+V + DGK E +R+ N DAI+ G+DA ++ Sbjct: 300 DGSCRTPIAGYAYKSGNNLEFRGLVASLDGKQILETTRSSNWSFTDAIDAGKDAGNELKA 359 Query: 299 ISNKNVFN 306 ++ F Sbjct: 360 LAPSEFFE 367 >gi|150387913|ref|YP_001317962.1| porphobilinogen deaminase [Alkaliphilus metalliredigens QYMF] gi|229836103|sp|A6TJD5|HEM3_ALKMQ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|149947775|gb|ABR46303.1| porphobilinogen deaminase [Alkaliphilus metalliredigens QYMF] Length = 316 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 116/303 (38%), Positives = 172/303 (56%), Gaps = 2/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +IG+R S LAL A + L + K P + II ++T GDRI ++TL +IGGKGL Sbjct: 2 RTIKIGSRASQLALVQAEIIINMLKE--KFPQYTYEIIKITTLGDRILDKTLDKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+K L +ID A+HS KDMP + + L + A RED RDV I+ +SL++L Sbjct: 60 FVKEIQKALAEEKIDLAIHSMKDMPGETPEELVLGAITKREDPRDVLITRENKSLEELPK 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +VIG+SSLRR+A ++ R DI V+ RG + TRL K+ ++LA AG+ RL ++ Sbjct: 120 GAVIGSSSLRRQAQVMALRGDIKVVPIRGNVGTRLGKIETESLDGVILAAAGLNRLGLKE 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I L IEDF P+ GQGA+ E + + E++ INHE+T+ V ERAFL L+G Sbjct: 180 KISSYLEIEDFTPAVGQGALGCEARRKDIEMLEMLLAINHEETYRCVMAERAFLKLLEGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C I + +G L+ G+V +SDG+ + G+ D +G + + K Sbjct: 240 CHVPIGAYGQQQGQELHMTGMVASSDGRRVIKEQVMGDIADFQALGIQLGETLIEKGAKE 299 Query: 304 VFN 306 + Sbjct: 300 ILE 302 >gi|328541997|ref|YP_004302106.1| Porphobilinogen deaminase [polymorphum gilvum SL003B-26A1] gi|326411747|gb|ADZ68810.1| Porphobilinogen deaminase [Polymorphum gilvum SL003B-26A1] Length = 302 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 143/300 (47%), Positives = 193/300 (64%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LALA A ETR+ LM H + I+ + T GDRI +R L+E+GGKGLFT Sbjct: 1 MRIGTRGSALALAQAHETRARLMAAHGLAEDAFEIVVIKTSGDRILDRPLSEVGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ ID AVHS+KDMPT L GL ++A+LPRED+RD F+S A+ L DL + Sbjct: 61 KEIEEALLDDRIDLAVHSSKDMPTLLPDGLALTAFLPREDVRDAFVSPKAKMLMDLPQGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+G+SSLRR+A++ R R DI V+ +RG ++TRL KL + A LLAYAG++RL V+ Sbjct: 121 VVGSSSLRRQAMIKRLRPDIEVVMYRGNVQTRLQKLEDGAVDATLLAYAGLRRLGLADVV 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +L+ + F P+ GQGAICIE+ V + L+ I+ +T + ERAFLAELDGSC+ Sbjct: 181 TSLLDTDAFLPAVGQGAICIESRVEDAATLGLLAAIHDRETEIRLTAERAFLAELDGSCR 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + I G A G L GI+L DG HE++R G DA IGR+A + ++ F Sbjct: 241 TPIGGLARIDGDRLSLAGIILRPDGSEAHEIAREGAVADAEAIGREAGRTLKAAGGPGFF 300 >gi|19849543|gb|AAL12220.1| porphobilinogen deaminase [Triticum aestivum] Length = 308 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 130/305 (42%), Positives = 187/305 (61%), Gaps = 5/305 (1%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR SPLALA A +TR L H + I I+ + T GD I ++ L +IGGKGLF Sbjct: 1 RIGTRGSPLALAQARQTRDELKAAHTELAEDGAIEIVIIKTTGDMILDKPLADIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+EI+ L+ G ID AVHS KD+PT L +G+ + LPRED+RD FI TA++L +L Sbjct: 61 TKEIDDALLQGSIDIAVHSMKDVPTYLPEGMILPCNLPREDVRDAFICLTAKTLGELPAG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SVI ++SLRR++ +L + V++FRG ++TRL KL HA LLA AG+KRL + Sbjct: 121 SVIASASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLGMPET 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 +L++++ P+ QGAI I N+ K E + +NHEDT +V CER FL+ LDG+C Sbjct: 181 ATSVLSVDEMLPAVAQGAIGITCRSNDDKMMEYLSSLNHEDTRLAVACEREFLSVLDGNC 240 Query: 245 KSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFISN 301 ++ IA +AY F G++ + DG I +E SR+G D + +G+DA ++ + Sbjct: 241 RTPIAAYAYRDKDGNCSFRGLLASPDGSIVYETSRSGTYSFDDMVALGQDAGHELKSKAG 300 Query: 302 KNVFN 306 F+ Sbjct: 301 PGFFD 305 >gi|148241995|ref|YP_001227152.1| porphobilinogen deaminase [Synechococcus sp. RCC307] gi|158513324|sp|A5GSE0|HEM3_SYNR3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|147850305|emb|CAK27799.1| Porphobilinogen deaminase [Synechococcus sp. RCC307] Length = 317 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 103/308 (33%), Positives = 152/308 (49%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ R L + H P I I ++T+GD+I + L +IG Sbjct: 1 MTASSLRIASRRSQLAMVQTEWVRDELANAH--PGLEISIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117 KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + H + Sbjct: 59 KGLFTKELEAQMLVNRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVMHAKNKDLT 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L +V+GTSSLRR A L ++ D RG + TRL KL++ + ++LA AG+ Sbjct: 119 LATLPEGAVVGTSSLRRLAQLRYHYPHLTFKDVRGNVITRLEKLDSGQFDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I E+++ + GQGA+ IE + E +KV+ H T ERAFL Sbjct: 179 RLGLGDRIHELIDPSISLHAVGQGALGIECRDGDAAVLEQIKVLEHRPTSLRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L+G C+ I +G L G+V + DGK + A ++G A+ +R Sbjct: 239 RTLEGGCQVPIGVNTRFEGDELVLTGMVASLDGKQLIRDELRAPQDQAEDLGNRLAELLR 298 Query: 298 FISNKNVF 305 + Sbjct: 299 SQGAGEIL 306 >gi|167630035|ref|YP_001680534.1| porphobilinogen deaminase [Heliobacterium modesticaldum Ice1] gi|167592775|gb|ABZ84523.1| porphobilinogen deaminase [Heliobacterium modesticaldum Ice1] Length = 315 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 105/303 (34%), Positives = 161/303 (53%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++P IGTR S LAL L +++ P + + TKGD+I + L +IG KG Sbjct: 5 QRPVVIGTRDSALALWQTHWVLERLKELY--PEQAFEVKHIKTKGDKILDVALAKIGDKG 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E +++GEID AVHS KD+PT L +G I A RED RD+ IS L++L Sbjct: 63 LFTKELEVAMLNGEIDMAVHSMKDLPTLLPEGCAIGAICVREDCRDILISRNGGGLEELP 122 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GT+SLRRKA + + R D+ ++D RG ++TR+ K+ ++LA AG+KRL Sbjct: 123 RGAKVGTASLRRKAQIWKVRPDLELVDIRGNLQTRMRKMEEQNLDGLILAAAGVKRLGWA 182 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I E + ++ P+ GQG++ IE + LV +NH ++ V ERA L L+G Sbjct: 183 EKITEYIPVDMCLPAVGQGSVGIEIREGDEAIGRLVAALNHAESALCVRAERALLRTLEG 242 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I G L G+V + DG+ G+ D G A+ + + Sbjct: 243 GCQVPIGSLGRLSGGKLIVDGVVASLDGRTICRDRVEGDPADPEEAGVRLAKKLLQQGAR 302 Query: 303 NVF 305 + Sbjct: 303 EIL 305 >gi|148244854|ref|YP_001219548.1| porphobilinogen deaminase [Candidatus Vesicomyosocius okutanii HA] gi|226740640|sp|A5CW34|HEM3_VESOH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|146326681|dbj|BAF61824.1| porphobilinogen deaminase [Candidatus Vesicomyosocius okutanii HA] Length = 304 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 104/303 (34%), Positives = 168/303 (55%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +I TR SPLAL A +S L ++ P ++++ ++TKGD+I N +L++IGGKG Sbjct: 2 NKTLKIATRQSPLALWQAQHVKSRLEKIY--PNLTVILVKITTKGDQILNSSLSKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E ++ G D AVHS KD+P ++ + ++ A L E+ D F+S+ S+ DL Sbjct: 60 LFIKELEISIMKGMSDIAVHSMKDVPYEIPQEFELGAILKCENPFDAFVSNHFSSIDDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ +GT S+RR L R D+ +ID RG + TRL KL++ + AI+LA AG+ RL Sbjct: 120 KNAKVGTCSMRRILQLKVIRPDLQIIDLRGNVNTRLKKLDDGEFDAIILACAGLIRLGFG 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 IK+ + P+ GQGAI IE N+ + +L+K + +T + ERA +L+G Sbjct: 180 NRIKQQIPENQNLPAVGQGAIGIEIRENDKEILDLIKPLIDIETSYRIIAERAMNTQLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C +AGFA + G+V D + + G+ A +G + A + + K Sbjct: 240 GCSVPVAGFATINNKQITLTGLVGNIDTGVILKEKIFGHVSQAEILGIELANKLILLGAK 299 Query: 303 NVF 305 ++ Sbjct: 300 DIL 302 >gi|15617181|ref|NP_240394.1| porphobilinogen deaminase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681931|ref|YP_002468317.1| porphobilinogen deaminase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682486|ref|YP_002468870.1| porphobilinogen deaminase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471641|ref|ZP_05635640.1| porphobilinogen deaminase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11386824|sp|P57651|HEM3_BUCAI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800236|sp|B8D8F3|HEM3_BUCA5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800237|sp|B8D8B0|HEM3_BUCAT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|25292183|pir||H84998 hydroxymethylbilane synthase (EC 4.3.1.8) [imported] - Buchnera sp. (strain APS) gi|10039246|dbj|BAB13280.1| porphobilinogen deaminase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219622219|gb|ACL30375.1| porphobilinogen deaminase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624774|gb|ACL30929.1| porphobilinogen deaminase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086313|gb|ADP66395.1| porphobilinogen deaminase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086887|gb|ADP66968.1| porphobilinogen deaminase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087477|gb|ADP67557.1| porphobilinogen deaminase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087959|gb|ADP68038.1| porphobilinogen deaminase [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 314 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 175/306 (57%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL + ++ ++ P NI ++P+ T GD I N++L++IGG Sbjct: 1 MYNKTLRIATRKSPLALKQTKYVQKKILSLY--PDLNIKLVPIVTHGDNILNKSLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ + D A+HS KD+P K+ K L + + R + D +S+ QS+ Sbjct: 59 KGLFIKELELALLENKADIAIHSMKDLPVKITKELCLVSICKRGNALDSLVSNNYQSINQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L+ +R D+ + RG IETR+ KL+ K AI+LA G+ RL+ Sbjct: 119 LPKGAIVGTSSLRRQCQLITYRPDLIISPLRGNIETRIAKLDQGKYDAIILATEGLNRLR 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I +I+ E PS GQGAI I++ +++ K + +NH +T+ +N ERAF +L Sbjct: 179 LKNRITQIIPAELSLPSCGQGAIGIQSRLHDKKVLFFLSRLNHINTFIEINAERAFCRKL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 + C+ I +A K + ++ G+V + +GKI + R G +G A + Sbjct: 239 ESGCQIPIGSYAILKKNKIWLRGLVGSPNGKIILKGERIGCYNTGEKMGYSLADELLKNG 298 Query: 301 NKNVFN 306 KN+ N Sbjct: 299 AKNILN 304 >gi|161594062|ref|NP_899724.2| porphobilinogen deaminase [Chromobacterium violaceum ATCC 12472] gi|55976482|sp|Q7P207|HEM3_CHRVO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 309 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 111/298 (37%), Positives = 165/298 (55%), Gaps = 2/298 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A ++ L ++ P + I+ ++T+GD+I ++TL++IGGKGLF Sbjct: 3 KIVIASRESRLAMWQAEHIQARLQALY--PHLTVEILGMTTQGDQILDKTLSKIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E+ L+ G D AVHS KD+P L G ++A RED RD F+S+ Q L +L Sbjct: 61 VKELEQALMDGRADLAVHSLKDVPMTLPDGFALAAVCEREDPRDAFVSNRYQHLSELPAG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SV+GTSSLRR+A L ++V RG ++TRL KL++ + AI+LA AG+KRL + Sbjct: 121 SVVGTSSLRREAQLRARFPQLAVKPLRGNVQTRLKKLDDGEFDAIILAAAGLKRLGLAER 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ L + P+ GQGA+ IE + L+ +NH DT ERA EL GSC Sbjct: 181 IQGELAPSESLPAAGQGALGIEIRADRADLSALLAPLNHPDTRACTAAERALAKELGGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 + + FA TL G+V DG + S +G A +GR A+ + + Sbjct: 241 QVPLGAFATLADGTLTLGGLVAHPDGSVVLTASASGPADYADALGRAVAKKLIDAGAR 298 >gi|71909286|ref|YP_286873.1| porphobilinogen deaminase [Dechloromonas aromatica RCB] gi|123733070|sp|Q479S8|HEM3_DECAR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|71848907|gb|AAZ48403.1| Porphobilinogen deaminase [Dechloromonas aromatica RCB] Length = 311 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 109/307 (35%), Positives = 162/307 (52%), Gaps = 3/307 (0%) Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + I +R S LA+ A R L ++ P +VI+ ++TKGD+I +R L EIG Sbjct: 1 MSRPSKIVIASRESRLAMWQAVHVRDRLSSLN--PGAEVVILGMTTKGDQILDRPLAEIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E + G+ AVHS KD+P + +G ++A RE+ RD F+S+ L Sbjct: 59 GKGLFIKELEVAMQEGKAHLAVHSMKDVPMVMPEGFVLAAISARENPRDAFVSNKYNGLD 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL +++GTSSLRR+++L + + RG ++TRL KL+ + AI+LA AG+ RL Sbjct: 119 DLPAGAIVGTSSLRRESILRAKYPQLVIKSLRGNLDTRLKKLDAGEYDAIILAAAGLIRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E IK +L E P+PGQGA+ IE ++V +N +T V ERAF Sbjct: 179 GMENRIKSVLTAEQSLPAPGQGALGIELIDGAADMADVVAPLNDPETAHCVKAERAFSRA 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L GSC+ + G+A L+ G V +DG+ GN D +G A +R Sbjct: 239 LGGSCQVPLGGYAIIDNGQLWLRGFVATADGQEVVSAELRGNPADDEALGLQLAAELRAK 298 Query: 300 SNKNVFN 306 + Sbjct: 299 GADAILE 305 >gi|291485230|dbj|BAI86305.1| porphobilinogen deaminase [Bacillus subtilis subsp. natto BEST195] Length = 314 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 168/305 (55%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGKGL Sbjct: 3 RTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFVFEIKEIVTKGDRIVDVTLSKVGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L++ EID AVHS KDMP L +GL I RED RD IS L ++ Sbjct: 61 FVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEMKE 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +VIGTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+ + Sbjct: 121 GAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKQ 180 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++G Sbjct: 181 DVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAMEG 240 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG++ G + G+V + DGKI + + GN D +G+ A + Sbjct: 241 GCQVPIAGYSVLNGQDEIEMTGLVASPDGKIIFKETVTGN--DPEEVGKRCAALMADRGA 298 Query: 302 KNVFN 306 K++ + Sbjct: 299 KDLID 303 >gi|269213761|ref|ZP_05982800.2| hydroxymethylbilane synthase [Neisseria cinerea ATCC 14685] gi|269145303|gb|EEZ71721.1| hydroxymethylbilane synthase [Neisseria cinerea ATCC 14685] Length = 325 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 104/307 (33%), Positives = 169/307 (55%), Gaps = 2/307 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCKVEILGMTTRGDQILDRTLSKVGG 72 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 132 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 133 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 312 Query: 301 NKNVFNF 307 + + Sbjct: 313 ARELIEV 319 >gi|321312347|ref|YP_004204634.1| porphobilinogen deaminase [Bacillus subtilis BSn5] gi|320018621|gb|ADV93607.1| porphobilinogen deaminase [Bacillus subtilis BSn5] Length = 313 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 167/305 (54%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGKGL Sbjct: 2 RTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFAFEIKEIVTKGDRIVDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L++ EID AVHS KDMP L +GL I RED RD IS L ++ Sbjct: 60 FVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEMKE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +VIGTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+ + Sbjct: 120 GAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKQ 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++G Sbjct: 180 DVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAMEG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG++ G + +V + DGKI + + GN D +G+ A + Sbjct: 240 GCQVPIAGYSVLNGQDEIEMTALVASPDGKIIFKETVTGN--DPEEVGKRCAALMADKGA 297 Query: 302 KNVFN 306 K++ + Sbjct: 298 KDLID 302 >gi|284799715|ref|ZP_05984671.2| hydroxymethylbilane synthase [Neisseria subflava NJ9703] gi|284797316|gb|EFC52663.1| hydroxymethylbilane synthase [Neisseria subflava NJ9703] Length = 323 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDRTLSKVGG 72 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFTLAAISERANPFDAFVSNQYARLEE 132 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 133 MPKGAVVGTSSLRREAQLRVRYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 312 Query: 301 NKNVF 305 + + Sbjct: 313 AEELI 317 >gi|304309752|ref|YP_003809350.1| Porphobilinogen deaminase [gamma proteobacterium HdN1] gi|301795485|emb|CBL43683.1| Porphobilinogen deaminase [gamma proteobacterium HdN1] Length = 311 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 120/305 (39%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR S LAL A R+ L+ H P ++ II ++TKGD+I + L +IGG Sbjct: 1 MSNHRIRIATRESALALWQAEHVRACLLAAH--PGLDVEIIGMTTKGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL +S L RED RD F+S+ +L Sbjct: 59 KGLFVKELEVAMLEGIADIAVHSMKDVPVDFPEGLGLSVILEREDPRDAFVSNQYDTLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GT SLRR+ L R DI +++ RG + +RL KL+ + AILLA AG+KRL Sbjct: 119 LPLGARVGTCSLRRQTQLRARRPDIEILELRGNVNSRLAKLDAGQFDAILLAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ P+ GQGAI IE ++ + L+ +NH DT V+ ERA L Sbjct: 179 FHERIRATLDPAASLPAVGQGAIGIECRTDDARTLALLAPLNHPDTHTCVSAERAMNHRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A G LY G+V DG G R DA +G A + Sbjct: 239 QGGCQVPIAGYAELHGDQLYMRGLVGEPDGSRILRAEIRGARADAAALGAALADDLLAQG 298 Query: 301 NKNVF 305 K + Sbjct: 299 AKEIL 303 >gi|260435886|ref|ZP_05789856.1| porphobilinogen deaminase [Synechococcus sp. WH 8109] gi|260413760|gb|EEX07056.1| porphobilinogen deaminase [Synechococcus sp. WH 8109] Length = 317 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 106/308 (34%), Positives = 152/308 (49%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLKITVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117 KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + + A Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNTKNHAYK 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L SV+GTSSLRR A L + D RG + TRL KL+N ++LA AG+ Sbjct: 119 LDTLPEGSVVGTSSLRRLAQLRHHYPHLIFKDVRGNVITRLEKLDNGDYDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +++ + + GQGA+ IE P+ E +KV+ H T ERAFL Sbjct: 179 RLGFGDRIHQLIPGDISLHAVGQGALGIECVEGKPEVLEAIKVLEHTPTSQRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I +G L G+V + DGK +G DA IG A ++ Sbjct: 239 RELEGGCQVPIGVNTRFEGDQLILTGMVASLDGKRLIRDQASGAASDAEAIGIALANTLK 298 Query: 298 FISNKNVF 305 + Sbjct: 299 GQGAGEIL 306 >gi|224094087|ref|XP_002310073.1| predicted protein [Populus trichocarpa] gi|222852976|gb|EEE90523.1| predicted protein [Populus trichocarpa] Length = 363 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 140/307 (45%), Positives = 188/307 (61%), Gaps = 6/307 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR LM H I I+ + T GD+I ++ L +IGGKGL Sbjct: 56 IRIGTRGSPLALAQAHETRDKLMASHSDLAEEGAIQIVIIKTTGDKIQSQPLADIGGKGL 115 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A SL DL Sbjct: 116 FTKEIDEALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSAASLADLPA 175 Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S+IGT+SLRRK+ +L +SV + FRG ++TRL KLN A LLA AG+KRL Sbjct: 176 GSIIGTASLRRKSQILHRYPSLSVEENFRGNVQTRLRKLNEGVVKATLLALAGLKRLNMT 235 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + IL ++D P+ QGAI I N+ K + +NHE+T +V CERAFL LDG Sbjct: 236 ENVTSILPLDDMLPAVAQGAIGIACRSNDDKMVNYLASLNHEETRLAVACERAFLETLDG 295 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFI 299 SC++ IAG+A + F G+V + DG+ E SR G D I +G+DA + + Sbjct: 296 SCRTPIAGYARKDENGDCIFKGLVASPDGRRVLETSRKGPYAFDDMIAMGKDAGKELLSQ 355 Query: 300 SNKNVFN 306 + F+ Sbjct: 356 AGPGFFD 362 >gi|295706769|ref|YP_003599844.1| porphobilinogen deaminase [Bacillus megaterium DSM 319] gi|294804428|gb|ADF41494.1| porphobilinogen deaminase [Bacillus megaterium DSM 319] Length = 310 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 118/305 (38%), Positives = 166/305 (54%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L P I + TKGD+I N TL+++GGKGL Sbjct: 2 RKIIVGSRRSKLALTQTKWVIEQLKKQGL--PFEFEIKEMVTKGDQILNVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ ++ EID AVHS KDMP L +GL I RED RD IS + ++L Sbjct: 60 FVKEIEQAMLDEEIDMAVHSMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELPS 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +VIGTSSLRR A LL RSDI + RG I+TRL KL N AI+LA AG+ R+ Sbjct: 120 GAVIGTSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNKDYDAIILAAAGLSRMGWSR 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + L E P+ GQGA+ IE N+ + L++ +NH++T +V ER FL E++G Sbjct: 180 DTVTQYLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEMEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+ G + +V + DGK ++ G D + IG AA+ + Sbjct: 240 GCQVPIAGYGRILDGGNIELTSLVASPDGKTIYKEQITGK--DPVAIGSAAAERLTSQGA 297 Query: 302 KNVFN 306 K + + Sbjct: 298 KLLID 302 >gi|313673928|ref|YP_004052039.1| hydroxymethylbilane synthase [Calditerrivibrio nitroreducens DSM 19672] gi|312940684|gb|ADR19876.1| hydroxymethylbilane synthase [Calditerrivibrio nitroreducens DSM 19672] Length = 308 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 108/306 (35%), Positives = 157/306 (51%), Gaps = 4/306 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK I TR S LAL A +S L ++ P + + + T+GD I + L +IGG Sbjct: 1 MEK--ITIATRGSKLALWQANHIKSLL--TNRYPEMLVELKIIKTQGDIILDVPLAKIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE LI E D AVHS KD+P +L L+I RE D F+S +L + Sbjct: 57 KGLFVKEIENALIENEADLAVHSMKDVPVELPDELEIYVNPHRESPFDAFLSVKYNNLDE 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRRK + R R DI + D RG ++TR+ KL AI+LA AG+ RL Sbjct: 117 LPRGAKLGTSSLRRKVQISRIRPDIEITDLRGNVDTRIRKLTEGTFDAIILARAGLNRLN 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + K + + PS QG + IE ++ + + ++K + E T ERAFL L Sbjct: 177 LLEWAKYTFDDSEIVPSVCQGTLGIEVRKDDDRIKNILKFMKDEKTEIVTRAERAFLRRL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C++ I G+ +G L G + + DG F + G+ +G A+ I Sbjct: 237 EGGCQAPIGGYCKIEGGKLKMIGFLSSLDGDEFLKYEEYGDMDKPEVLGESVAEKILING 296 Query: 301 NKNVFN 306 K + + Sbjct: 297 GKKILD 302 >gi|315122376|ref|YP_004062865.1| porphobilinogen deaminase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495778|gb|ADR52377.1| porphobilinogen deaminase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 307 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 243/307 (79%), Positives = 276/307 (89%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 ME+K F+IGTR SPLALAHAFETRS LM VHKIP I ++PLSTKGDRITNRTLTEIGG Sbjct: 1 MEEKDFKIGTRRSPLALAHAFETRSYLMSVHKIPLEKIFVVPLSTKGDRITNRTLTEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEEIE+KLISGEID AVHSAKDMPTKLLKGL+ISAYLPRED+RDVFISHTAQSL D Sbjct: 61 KGLFTEEIERKLISGEIDFAVHSAKDMPTKLLKGLRISAYLPREDVRDVFISHTAQSLND 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LA++S++GTSSLRRKALLLRWR+D+S+IDFRGKIETRL KL N +A A+LLAYAGIKRLK Sbjct: 121 LAVNSIVGTSSLRRKALLLRWRADLSIIDFRGKIETRLTKLKNKQADAMLLAYAGIKRLK 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 KE V+KEILN+EDFPPSPGQGAICIETH+NN +A EL INH +TWD+V+CERAFLAEL Sbjct: 181 KESVVKEILNLEDFPPSPGQGAICIETHMNNTRAHELATAINHRETWDTVSCERAFLAEL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSCKSAIAGF+YCKG +LYFYG +L DGKIFHEVS++GN CDAI IGRDA ++IR I+ Sbjct: 241 DGSCKSAIAGFSYCKGQSLYFYGTILTPDGKIFHEVSKSGNCCDAIQIGRDAGRHIRLIA 300 Query: 301 NKNVFNF 307 +K +FN Sbjct: 301 DKTIFNL 307 >gi|23099523|ref|NP_692989.1| porphobilinogen deaminase [Oceanobacillus iheyensis HTE831] gi|39931547|sp|Q8CXC0|HEM3_OCEIH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|22777752|dbj|BAC14024.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Oceanobacillus iheyensis HTE831] Length = 309 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 112/304 (36%), Positives = 169/304 (55%), Gaps = 5/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +GTR S LAL L + I + TKGD+I + TL+++GGKGL Sbjct: 2 RKIIVGTRKSNLALTQTEWVIDQLKKAGV--KNEFEIKKIVTKGDQILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIEK + EID AVHS KDMP + +GL IS+ RED RD +++ L+DL Sbjct: 60 FVKEIEKAMFDKEIDLAVHSMKDMPAVIPEGLTISSIPEREDHRDAYLAKDNILLQDLPE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +++GTSSLRR A +L R D+++ RG IETR+ KL AI+LA +G+KR+ E Sbjct: 120 GAIVGTSSLRRGAQILAERPDLTIKWIRGNIETRIRKLQEEDYDAIILAVSGLKRVGLSE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++I E L E P+ GQGA+ IE+ ++ + +VK I+ T +V+ ER FL L+G Sbjct: 180 ELITEYLEPEVCVPAVGQGALAIESREDDEELTNIVKKIHDAYTAKTVSAERTFLHLLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I G+AY G + +V DG + + G + +G++AA+ + K Sbjct: 240 GCQVPIGGYAYLDGDEVVLTALVGDPDGTTILKETVRGT--EPTEVGKEAAELLISQGAK 297 Query: 303 NVFN 306 + + Sbjct: 298 EIVD 301 >gi|78187286|ref|YP_375329.1| porphobilinogen deaminase [Chlorobium luteolum DSM 273] gi|123757188|sp|Q3B2Z5|HEM3_PELLD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78167188|gb|ABB24286.1| Porphobilinogen deaminase [Chlorobium luteolum DSM 273] Length = 313 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 122/307 (39%), Positives = 166/307 (54%), Gaps = 6/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK IGTR SPLAL A T++ L P I + + T GD + + L++IG G Sbjct: 2 KKQLIIGTRSSPLALWQAEFTKAEL--SRHFPDLEITLKLVKTTGDVLLDSPLSKIGDMG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT++IEK LI+ EID AVHS KD+PT +GL ISA+ RED RDV IS T L DL Sbjct: 60 LFTKDIEKFLIAKEIDLAVHSLKDVPTATPEGLIISAFTEREDTRDVIISKTGAKLLDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ + TSSLRR + L R D + D RG + TR K + + A++LAYAG+ RL Sbjct: 120 KNAKVATSSLRRMSQLKSLRPDFEICDIRGNLNTRFKKFDEGEFDAMMLAYAGVYRLNFS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EIL E P+ GQGA+ IET V++ + +E+VKV+NH T ERA L L G Sbjct: 180 DRISEILPHEIMLPAVGQGALGIETRVDDEQTREIVKVMNHSTTEYCCKAERALLRHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN----GNRCDAINIGRDAAQYIRF 298 C+ I +A K TL+ V ++DG I + A G + A+ + Sbjct: 240 GCQIPIGAYASFKNGTLHLLAFVGSTDGTIGIRDEITKTGLTSPSQAEEAGIELAKELLK 299 Query: 299 ISNKNVF 305 + + Sbjct: 300 QGAEKIL 306 >gi|56964395|ref|YP_176126.1| porphobilinogen deaminase [Bacillus clausii KSM-K16] gi|61213279|sp|Q5WEP5|HEM3_BACSK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|56910638|dbj|BAD65165.1| porphobilinogen deaminase [Bacillus clausii KSM-K16] Length = 311 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 118/305 (38%), Positives = 175/305 (57%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + IGTR S LAL L + P+ + + TKGDRI + TL+++GGKGL Sbjct: 2 RKIVIGTRRSKLALTQTNWVIDQLKQLGV--PYEFEVKEIVTKGDRILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L SGEID AVHS KD+P++LL+ ++A RED RDV +S +L +L Sbjct: 60 FVKEIEAALRSGEIDVAVHSMKDVPSELLEEFTLAAITEREDPRDVLVSENGHTLDELPA 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +++GTSSLRR A +L R D+ V RG +ETRL KL AI+LA AG+KRL E Sbjct: 120 GAIVGTSSLRRSAQILHRRPDVQVKWIRGNVETRLRKLKEEDFSAIVLAAAGLKRLGYGE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ + P+ GQGA+ +E V++ + EL+ ++HE+T +V ERAFL E++G Sbjct: 180 DVITEYLDKDVCLPAIGQGALGLECRVDDVETTELLAKLHHEETGKAVLAERAFLKEMNG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ I G+A + ++ G+V + DGK + + G D +G++ + + Sbjct: 240 GCQVPIGGYATVLEDGAVFLTGLVGSPDGKTILKEGKCGMVAD--ELGKEVSSLLTAQGA 297 Query: 302 KNVFN 306 + Sbjct: 298 GAILE 302 >gi|318041172|ref|ZP_07973128.1| porphobilinogen deaminase [Synechococcus sp. CB0101] Length = 317 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 105/309 (33%), Positives = 153/309 (49%), Gaps = 5/309 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ R L H+ I I ++T+GD+I + L +IG Sbjct: 1 MAASQLRIASRRSQLAMVQTHWVRDELAKAHE--GLEITIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117 KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + H ++ Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVHEKHKDKT 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L SV+GTSSLRR A L ++ D RG + TRL KL++ + ++LA AG+ Sbjct: 119 LATLPEGSVVGTSSLRRLAQLRHHFPHLTFKDVRGNVITRLEKLDSGEFDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I E+++ + GQGA+ IE + E +KV+ H T ERAFL Sbjct: 179 RLGLGDRIHELIDPSISLHAVGQGALGIECREGDTAVLEQIKVLEHLPTARRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I +G L G+V + DG+ G++ D IG A +R Sbjct: 239 RELEGGCQVPIGVNTRFEGDELVLTGMVASLDGQRLIRDEARGDQKDPEAIGIALAHALR 298 Query: 298 FISNKNVFN 306 + Sbjct: 299 AQGAGEILE 307 >gi|310643595|ref|YP_003948353.1| phosphate abc transporter, atpase subunit [Paenibacillus polymyxa SC2] gi|309248545|gb|ADO58112.1| Phosphate ABC transporter, ATPase subunit [Paenibacillus polymyxa SC2] Length = 308 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 110/304 (36%), Positives = 165/304 (54%), Gaps = 4/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMD--VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +G+R S LAL L VI + TKGDRI + TL+++GGK Sbjct: 2 RTIVVGSRQSALALTQTGHVIEDLNALCAEHGLDLQFVIKKILTKGDRILDVTLSKVGGK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +EIE+ +++GEID AVHS KDMP++L +GL A RED RD I+ A+SL+DL Sbjct: 62 GLFVKEIEQAMLAGEIDMAVHSMKDMPSELPEGLVNGAVPRREDPRDCLITLGAKSLEDL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSSLRR + + R D+ + RG I++RL KL AI+LA AG+ R+ Sbjct: 122 PSGAKVGTSSLRRASQIKSMRPDLQLEPVRGNIDSRLKKLETEGFDAIILAAAGLHRMGW 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I + E P+ GQGA+ IE ++ + L+++ NH+DT +V ER FL L+ Sbjct: 182 KDRITSYIPEEACLPAVGQGALGIECRASDEELLALLRLYNHQDTSATVEAERTFLGVLN 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I A G + G+V + DG++ + + GN D +G A + Sbjct: 242 GGCQVPIGAHAVWAGQEISLTGMVGSPDGEVILKETLQGN--DPQKLGEAVAASLIAKGA 299 Query: 302 KNVF 305 + + Sbjct: 300 EQIL 303 >gi|126725997|ref|ZP_01741839.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2150] gi|126705201|gb|EBA04292.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2150] Length = 313 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 129/305 (42%), Positives = 181/305 (59%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + P +IGTR SPLALA A ETR L H + P I+ + T GD + +R L EIGGKG Sbjct: 7 QSPLKIGTRGSPLALAQAHETRDRLSKAHNLAPEAFEIVVIKTTGDIVQDRPLKEIGGKG 66 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+EIE+ ++SG+ID AVHS KDMP + GL I+ YLPRED+RD F+S +A S DL Sbjct: 67 LFTKEIEEAMLSGDIDIAVHSMKDMPVEQPDGLAITCYLPREDVRDAFVSLSADSFDDLR 126 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +G+SSLRR+A L R D+++++FRG ++TR+ KL + A A LA AG+ RL Sbjct: 127 QGATVGSSSLRRRAQLAHRRPDLNLVEFRGNVQTRMRKLGDGVADATFLAMAGLIRLGMS 186 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V + L + F P+ QGAI IE + + E++ I+ + T D + ERAFLA ++G Sbjct: 187 DVARLPLETDVFLPAVAQGAIGIEQRIGDSVISEMLTAIHDQHTGDLLAAERAFLARVEG 246 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC++ IAG A L+F +L DG + +G D IGR A + + Sbjct: 247 SCQTPIAGLAEIIDGKLHFRAEILRPDGSEAITGAASGEIADGAAIGRQVADDLLARAPT 306 Query: 303 NVFNF 307 F + Sbjct: 307 GFFEW 311 >gi|261418339|ref|YP_003252021.1| porphobilinogen deaminase [Geobacillus sp. Y412MC61] gi|297529191|ref|YP_003670466.1| porphobilinogen deaminase [Geobacillus sp. C56-T3] gi|319767702|ref|YP_004133203.1| porphobilinogen deaminase [Geobacillus sp. Y412MC52] gi|261374796|gb|ACX77539.1| porphobilinogen deaminase [Geobacillus sp. Y412MC61] gi|297252443|gb|ADI25889.1| porphobilinogen deaminase [Geobacillus sp. C56-T3] gi|317112568|gb|ADU95060.1| porphobilinogen deaminase [Geobacillus sp. Y412MC52] Length = 310 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 117/304 (38%), Positives = 173/304 (56%), Gaps = 5/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + L + P + + TKGDR+ + TL+++GGKGL Sbjct: 2 RNIVVGSRRSKLALTQTKWVINELKQLGA--PFTFEVKEIVTKGDRVLDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE +L++G ID AVHS KDMP L +GL I A RED RDV +S + L DL Sbjct: 60 FVKEIEHELLAGGIDMAVHSMKDMPAVLPEGLVIGAVPRREDARDVLVSKGNRMLSDLPP 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 SVIGTSSLRR A LL +R D+++ RG I+TRL KL + + AI+LA AG+ R+ + Sbjct: 120 GSVIGTSSLRRSAQLLAYRPDLTIKWIRGNIDTRLAKLESEEYDAIVLAAAGLARMGWGD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI + L + P+ GQGA+ +E ++ + ++ + +N E T +V ERAFL +++G Sbjct: 180 DVISDYLPFDVCVPAVGQGALAVECREDDDELRQWLSRLNDEQTERAVRAERAFLQQMEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+A G + +V + DGK ++ G D +GR AA + K Sbjct: 240 GCQVPIAGYAEADGGMVRLTALVASPDGKEKYKEMVTG--ADPEAVGRQAAAVLIEQGAK 297 Query: 303 NVFN 306 + Sbjct: 298 ALIE 301 >gi|116793769|gb|ABK26871.1| unknown [Picea sitchensis] Length = 373 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 135/307 (43%), Positives = 190/307 (61%), Gaps = 5/307 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A+ETR L H + II + T GD+I N+ L +IGGKGL Sbjct: 67 VRIGTRGSPLALAQAYETRDKLKSAHPELAEEGAVEIIIIKTTGDKILNQPLADIGGKGL 126 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G+ID AVHS KD+PT L G + LPRED+RDVFI TA SL +L Sbjct: 127 FTKEIDDALLGGKIDIAVHSMKDVPTYLPSGTILPCNLPREDVRDVFICPTAGSLAELQA 186 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S++G++SLRR++ +L + VI+FRG ++TRL KL + HA LLA+AG+KRL + Sbjct: 187 GSIVGSASLRRQSQILYRYPSLKVINFRGNVQTRLRKLKEGEVHATLLAFAGLKRLGMIQ 246 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + +L+ E+ P+ QGAI I N+ K + + +NHE+T +V CERAFL LDGS Sbjct: 247 HVTCLLSTEEMLPAIAQGAIGIACRSNDDKMADYLAALNHEETRLAVACERAFLETLDGS 306 Query: 244 CKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFIS 300 C++ IAG+A K F G++ + DG E SR G D +++G DA + ++ + Sbjct: 307 CRTPIAGYAFRDKDGFCSFRGLIASPDGTRVLETSRKGAYTYEDMVSMGVDAGKELKERA 366 Query: 301 NKNVFNF 307 F++ Sbjct: 367 GPAFFDW 373 >gi|88705502|ref|ZP_01103212.1| Porphobilinogen deaminase [Congregibacter litoralis KT71] gi|88700015|gb|EAQ97124.1| Porphobilinogen deaminase [Congregibacter litoralis KT71] Length = 308 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 100/300 (33%), Positives = 166/300 (55%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR SPLAL A+ R +L++ H P + ++ ++++GD+I + L ++GGKGLF Sbjct: 5 VVIATRESPLALWQAYFVRDTLLETH--PGITVELLGMTSRGDQILDVPLAKVGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G AVHS KD+P + +GL+++ RE+ D F+S+ ++L L + Sbjct: 63 KELETALLDGRAHIAVHSMKDVPMEFPEGLELAVICEREEPADAFVSNRYENLDALPAGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ V RG + TRL KL+ + A++LA AG+ RL+ + I Sbjct: 123 IVGTSSLRRECQLRANRPDLEVRFLRGNVNTRLRKLDEGEYDAVILACAGLIRLEMGERI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + + D P+ GQGA+ IE ++ ++L++ ++H T + V ERA L G C+ Sbjct: 183 RARIPVTDSLPAGGQGAVGIEIRSDDSATRKLLEPLHHGPTAERVLAERALNRRLQGGCE 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IA +A +G L+ G+V DG G+R + +G A + + Sbjct: 243 VPIASYAVHEGDELWLRGLVGRPDGSHTLRADARGSREEPEALGIAVADSLLEAGAAEIL 302 >gi|241759313|ref|ZP_04757419.1| hydroxymethylbilane synthase [Neisseria flavescens SK114] gi|241320449|gb|EER56746.1| hydroxymethylbilane synthase [Neisseria flavescens SK114] Length = 325 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 103/305 (33%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDRTLSKVGG 72 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 132 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 133 MPKGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 312 Query: 301 NKNVF 305 + + Sbjct: 313 AEELI 317 >gi|301062020|ref|ZP_07202731.1| hydroxymethylbilane synthase [delta proteobacterium NaphS2] gi|300443871|gb|EFK07925.1| hydroxymethylbilane synthase [delta proteobacterium NaphS2] Length = 316 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 115/300 (38%), Positives = 170/300 (56%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL + + L H ++ +I + T GD+I + L++IGGKGLF Sbjct: 3 IRIGTRGSKLALTQSEWIKEQLEIRHS--GIHVDLIKIKTTGDKILDTPLSKIGGKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ ID AVHS KD+P +L + L +S + PRED D I+ + L L + Sbjct: 61 KEIEEALLQNRIDVAVHSMKDVPAELPEALMLSTFPPREDPSDALIAQENRRLDQLPEGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR A LL R D++++ RG ++TRL KL + + A++LA AG+ RL VI Sbjct: 121 RVGTSSLRRGAQLLHLRPDLTLVPLRGNVDTRLGKLKSGEVEAVILATAGLNRLGLSGVI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + P+ GQGA+ +E ++ + + +NH+DT +V ER FL L+G C+ Sbjct: 181 TQRIPFHQLLPAVGQGALGLEVRRDDRETIRRLDFLNHDDTRTAVTAERGFLKTLEGGCQ 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IAGFA G L F G+V DG ++ G+R DA IG +AA+ + +V Sbjct: 241 VPIAGFAQIVGDNLSFEGLVAELDGSRIYKEIATGSRDDAEKIGIEAAKTLLSSGAGDVL 300 >gi|308273123|emb|CBX29726.1| Porphobilinogen deaminase [uncultured Desulfobacterium sp.] Length = 323 Score = 367 bits (944), Expect = e-99, Method: Composition-based stats. Identities = 120/304 (39%), Positives = 167/304 (54%), Gaps = 2/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ IGTR S LAL A +S L V K ++ + + TKGDRI + L ++GGKG Sbjct: 17 KRKIIIGTRGSKLALWQAEWVKSYL--VQKFTDLSVELKIIKTKGDRILDVALAKVGGKG 74 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L ID AVHS KDMP L GL I A RE+ RDV IS L L Sbjct: 75 LFVKEIEQSLADSSIDIAVHSMKDMPADLHDGLCIGAIPERENPRDVLISGKGLLLSQLP 134 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A + R R D+ + RG ++TR+NKL + AI+LA AG+KRL E Sbjct: 135 EGALVGTSSLRRIAQIKRIRPDLVIAPLRGNLDTRINKLEMGEIDAIILAAAGVKRLGLE 194 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 K+I E LN + P+ GQGA+CIE ++ + +NH T V ERAFL ++G Sbjct: 195 KIITEYLNEDTMLPAVGQGALCIEIRKDDHDISGFINEMNHFVTRAVVLGERAFLKRIEG 254 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+ + G+V DGK ++ G+ + +IG A + + K Sbjct: 255 GCQVPIAGYGKVENDIFIIRGLVADPDGKTIITDTQRGSLESSESIGAALADRLISMGAK 314 Query: 303 NVFN 306 + + Sbjct: 315 RLLD 318 >gi|319780787|ref|YP_004140263.1| porphobilinogen deaminase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166675|gb|ADV10213.1| porphobilinogen deaminase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 308 Score = 367 bits (944), Expect = e-99, Method: Composition-based stats. Identities = 141/304 (46%), Positives = 207/304 (68%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIGTR SPLALA A ET++ LM H +P ++ +ST GDRI +R L+E GGKG Sbjct: 2 QTILRIGTRGSPLALAQAHETQARLMAAHGMPAEAFEVVVISTSGDRIQDRPLSEAGGKG 61 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+EIE+ L++G ID AVHS+KDMPT+L GL++SA+LPRED RD F+ A+++ +L Sbjct: 62 LFTKEIEEALLAGRIDIAVHSSKDMPTQLPDGLELSAFLPREDARDAFVGKVAKAIAELP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +G+SSLRR+AL+ R R D+ V+ FRG ++TRL KL A +LAYAG+KRL E Sbjct: 122 RGAKVGSSSLRRQALIRRMRPDLDVVMFRGNVQTRLRKLEEGVAAGTILAYAGLKRLGLE 181 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ +++ ++ FPP+PGQGAI IET + + ++++ ++ T ++ CERAFLA LDG Sbjct: 182 HVVTDLIPLDVFPPAPGQGAIGIETRIGDRDVEKMLAAVHDVPTGQALACERAFLAALDG 241 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC++ IAG+A + L F G++++ DG H V G+ DA IG +AA+ +R + + Sbjct: 242 SCRTPIAGYAAIEAGKLSFAGLIISPDGTQSHTVELQGSAQDAARIGGEAARSVRARAGE 301 Query: 303 NVFN 306 F+ Sbjct: 302 KFFD 305 >gi|303247619|ref|ZP_07333890.1| porphobilinogen deaminase [Desulfovibrio fructosovorans JJ] gi|302491099|gb|EFL50993.1| porphobilinogen deaminase [Desulfovibrio fructosovorans JJ] Length = 310 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 106/304 (34%), Positives = 161/304 (52%), Gaps = 2/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + I TR S LAL A + L + H P + ++P+ TKGDRI + L ++GGKG Sbjct: 2 RDKLVIATRGSKLALWQANHVAARLKEAH--PGLAVDLLPIKTKGDRILDVPLAKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L+ G D AVHS KD+P + GL + RED D+ +S L L Sbjct: 60 LFVKEIEEALLDGRADLAVHSMKDVPAEQPAGLVVGITPKREDPCDMLLSVAYDGLDALP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRRKA L R D++++D RG ++TR+ KL + AI++A AG+ RL Sbjct: 120 EGAKVGTSSLRRKAQLTALRPDLAIVDLRGNLDTRVGKLTDGLFDAIVVARAGLNRLGLS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 E L F P+ QGA+ IE ++ + ++ +H ++ D+V ERAFL L+G Sbjct: 180 APKSERLCPPRFLPAAAQGALGIEYRFDDRETAAMLAFFDHPESRDAVAAERAFLGRLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IA A G+ + G+V D G R DA+ +G+ A + + + Sbjct: 240 GCQVPIAAHAVIDGNLISIDGLVADPDTGRTFRDVATGKRDDAVELGKKLADSVLAMGAR 299 Query: 303 NVFN 306 + + Sbjct: 300 AILD 303 >gi|319639194|ref|ZP_07993945.1| porphobilinogen deaminase [Neisseria mucosa C102] gi|317399378|gb|EFV80048.1| porphobilinogen deaminase [Neisseria mucosa C102] Length = 325 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDRTLSKVGG 72 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 132 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 133 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 312 Query: 301 NKNVF 305 + + Sbjct: 313 AEELI 317 >gi|85705298|ref|ZP_01036397.1| porphobilinogen deaminase [Roseovarius sp. 217] gi|85670171|gb|EAQ25033.1| porphobilinogen deaminase [Roseovarius sp. 217] Length = 315 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 133/303 (43%), Positives = 184/303 (60%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR SPLALA AFETR+ L +P I+ + T GD+I +R L EIGGKGLF Sbjct: 11 PLKIGTRGSPLALAQAFETRARLGAAFDLPEEVFEIVVIKTTGDQIIDRPLKEIGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE+ L++GEID AVHS KDMP +GL + YLPRED+RD F+S SL DL Sbjct: 71 TREIEQALLTGEIDIAVHSMKDMPVLQPEGLLLDTYLPREDVRDAFVSPLVGSLADLPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +++GTSSLRRKA +L + V++FRG ++TRL KL + A LA AG+ RL + +V Sbjct: 131 ALVGTSSLRRKAQVLVAYPHLQVVEFRGNVQTRLKKLADGVATCTFLAMAGLNRLGRSEV 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ E P+ QGAI IE ++ +A E++ I+H++T + ERAFLA LDGSC Sbjct: 191 ATGAIDPEVMLPAVAQGAIGIERRADDTRAAEMLAAIHHKETGQRLVSERAFLAALDGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A G+TL G +L DG ++ D ++GR A + + Sbjct: 251 ETPIAGLAELNGNTLRLRGEILRPDGSESLTDDQSAPIEDGADLGRAMAAKLLAQAGPGF 310 Query: 305 FNF 307 F++ Sbjct: 311 FDW 313 >gi|148909210|gb|ABR17705.1| unknown [Picea sitchensis] Length = 373 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 135/307 (43%), Positives = 190/307 (61%), Gaps = 5/307 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A+ETR L H + II + T GD+I N+ L +IGGKGL Sbjct: 67 VRIGTRGSPLALAQAYETRDKLKSAHPELAEEGAVEIIIIKTTGDKILNQPLADIGGKGL 126 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G+ID AVHS KD+PT L G + LPRED+RDVFI TA SL +L Sbjct: 127 FTKEIDDALLGGKIDIAVHSMKDVPTYLPSGTILPCNLPREDVRDVFICPTAGSLAELQA 186 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S++G++SLRR++ +L + VI+FRG ++TRL KL + HA LLA+AG+KRL + Sbjct: 187 GSIVGSASLRRQSQILYRYPSLKVINFRGNVQTRLRKLKEGEVHATLLAFAGLKRLGMIQ 246 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + +L+ E+ P+ QGAI I N+ K + + +NHE+T +V CERAFL LDGS Sbjct: 247 HVTCLLSTEEMLPAIAQGAIGIACRSNDDKMADYLAALNHEETRLAVACERAFLETLDGS 306 Query: 244 CKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFIS 300 C++ IAG+A K F G++ + DG E SR G D +++G DA + ++ + Sbjct: 307 CRTPIAGYAFRDKDGFCSFRGLIASPDGTRVLETSRKGAYTHEDMVSMGVDAGKELKERA 366 Query: 301 NKNVFNF 307 F++ Sbjct: 367 GPAFFDW 373 >gi|225075410|ref|ZP_03718609.1| hypothetical protein NEIFLAOT_00415 [Neisseria flavescens NRL30031/H210] gi|224953228|gb|EEG34437.1| hypothetical protein NEIFLAOT_00415 [Neisseria flavescens NRL30031/H210] Length = 325 Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 72 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 132 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 133 MPKGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 312 Query: 301 NKNVF 305 + + Sbjct: 313 AEELI 317 >gi|116872985|ref|YP_849766.1| porphobilinogen deaminase [Listeria welshimeri serovar 6b str. SLCC5334] gi|123466350|sp|A0AJ05|HEM3_LISW6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|116741863|emb|CAK20987.1| porphobilinogen deaminase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 309 Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats. Identities = 113/307 (36%), Positives = 169/307 (55%), Gaps = 7/307 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKE--QYPEFDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L + ID AVHS KD+P+ L +GL I A RE D F+ + SL DL Sbjct: 60 LFVSEVEQALSNSTIDFAVHSMKDVPSSLEEGLVIGAIPKRESPLDCFVFNQVSSLDDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL+ R D ++ RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 120 KGAIVGTSSLRRAAQLLKHRPDFNIRPIRGNIDTRLQKLHVENFDAIILAKAGLARMGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E + E P+ GQGA+ IE ++ ++++ I+HE+T V ER FL + Sbjct: 180 ENTTLKLEDIAPEVCLPAVGQGALAIECRESDQLIRDMLATIHHEETGICVEAERVFLKK 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ IAGFA G ++F G+V +DG E G + IG A+ + Sbjct: 240 LNGGCEIPIAGFATKIGEQIHFKGLVGNADGSKILESKEIG--ENPGQIGNKVAEVLLSE 297 Query: 300 SNKNVFN 306 + + Sbjct: 298 GAETIIE 304 >gi|260464233|ref|ZP_05812426.1| porphobilinogen deaminase [Mesorhizobium opportunistum WSM2075] gi|259030036|gb|EEW31319.1| porphobilinogen deaminase [Mesorhizobium opportunistum WSM2075] Length = 308 Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats. Identities = 138/304 (45%), Positives = 206/304 (67%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +IGTR SPLALA A ET++ LM H +P ++ +ST GDRI +R L+E GGKG Sbjct: 2 QTTLKIGTRGSPLALAQAHETQARLMAAHGMPAEAFEVVVISTSGDRIQDRPLSEAGGKG 61 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+EIE+ L++G ID AVHS+KDMPT+L GL++SA+L RED RD ++ +++ DL Sbjct: 62 LFTKEIEEALLAGAIDIAVHSSKDMPTQLPDGLELSAFLSREDARDAYVGKATKTIADLP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +G+SSLRR+AL+ R R D+ V+ FRG ++TRL KL+ A +LAYAG+KRL + Sbjct: 122 RGAKVGSSSLRRQALIRRMRPDLDVVMFRGNVQTRLRKLDEGVAAGTILAYAGLKRLGLD 181 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ +++ ++ FPP+PGQGAI IET + + ++++ I+ T ++ CERAFLA LDG Sbjct: 182 HVVTDLIPLDVFPPAPGQGAIGIETRIGDRAVEKMLVAIHDVPTGQALACERAFLAALDG 241 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC++ IAG+A +G L F G++++ DG H + G DA IG +AA+ +R + + Sbjct: 242 SCRTPIAGYAAIEGGKLSFAGLIISPDGTQSHTIDLQGPAQDAALIGTEAARTVRAKAGE 301 Query: 303 NVFN 306 F+ Sbjct: 302 KFFD 305 >gi|332978074|gb|EGK14812.1| hydroxymethylbilane synthase [Desmospora sp. 8437] Length = 367 Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats. Identities = 104/303 (34%), Positives = 159/303 (52%), Gaps = 3/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +GTR S LA+ + D + + + T+GD+I N TL+++GGKGL Sbjct: 60 RTIVVGTRRSQLAVTQTQWVMEQVRDRLPQ-GWQMEMEKMVTRGDQILNVTLSKVGGKGL 118 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+ G ID AVHS KDMP ++ +GL A RED RD +S + L DL Sbjct: 119 FVKEIEQALLDGRIDFAVHSMKDMPGEMPEGLIFGAVTRREDPRDCLLSRKGEGLDDLPE 178 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++ +GTSSLRR+A LL +R D+ V RG + TR KL + + AI+LA AGI R+ Sbjct: 179 NACVGTSSLRRQAQLLAYRPDLRVEPVRGNLNTRYQKLMDGQFDAIILAQAGIARMDWTD 238 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + +++ E P+ GQGA+ ++ ++ + EL+ +N T +V ER FL +G Sbjct: 239 KVTQVVPEEVMLPAVGQGALAVQCRRDDQELLELLAEVNDPVTERAVTAERTFLQAFEGG 298 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C IAG A G + G+V G G D + +GR A+ + ++ Sbjct: 299 CHLPIAGRATVDGERIRLRGLVAHPSGTPILREEAEG--ADPVELGRRLARELMEKGARS 356 Query: 304 VFN 306 + Sbjct: 357 LLE 359 >gi|296331638|ref|ZP_06874107.1| porphobilinogen deaminase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675403|ref|YP_003867075.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus subtilis subsp. spizizenii str. W23] gi|296151233|gb|EFG92113.1| porphobilinogen deaminase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413647|gb|ADM38766.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus subtilis subsp. spizizenii str. W23] Length = 313 Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 167/305 (54%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGKGL Sbjct: 2 RTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFAFEIKEIVTKGDRIVDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L++ +ID AVHS KDMP L +GL I RED RD IS L ++ Sbjct: 60 FVKEIEQALLNEDIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNHVKLSEMKE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +VIGTSSLRR A LL R DI++ RG I+TRL KL AI+LA AG+ R+ + Sbjct: 120 GAVIGTSSLRRSAQLLIERPDITIKWIRGNIDTRLKKLETEDYDAIILAAAGLSRMGWKQ 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L + P+ GQGA+ IE ++ + L E T +V ERA+L ++G Sbjct: 180 DVVTEFLEPDRCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAYLNAMEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG++ + + G+V + DGKI + + GN D +G+ A + Sbjct: 240 GCQVPIAGYSVLNEQDEIELTGLVTSPDGKIIFKETVTGN--DPEEVGKRCAALMADKGA 297 Query: 302 KNVFN 306 K + + Sbjct: 298 KELID 302 >gi|167626913|ref|YP_001677413.1| porphobilinogen deaminase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189028091|sp|B0TW04|HEM3_FRAP2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|167596914|gb|ABZ86912.1| Hydroxymethylbilane synthase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 300 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 104/303 (34%), Positives = 168/303 (55%), Gaps = 5/303 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LAL + + I + T+GD I ++ L +IGGK L Sbjct: 2 KQIVIASRESKLALWQTNYVKDRIQQEL---NIRCQINTMKTQGDIILDKPLNKIGGKAL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E +++ + D AVHS KD+P +L +G +S+++PRED RD F+S+ S+ DL Sbjct: 59 FMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLSSFMPREDPRDAFVSNKYSSIDDLPR 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ + Sbjct: 119 GAIVGTSSLRRKAQLLHYRYDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELNE 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +E P+ GQG + IE + + + ++ +N D++ ERAF EL G Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALDKSSEILQKLQKLNCSDSFCVATAERAFNQELKGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C AI +A + + +V +SDGK + G+ D + +G+ AQ + + Sbjct: 239 CHVAIGAYAELHDNQITLTAMVASSDGKNILKRKLTGD--DPMRLGKLLAQEMIELGAYK 296 Query: 304 VFN 306 + Sbjct: 297 ILE 299 >gi|116254224|ref|YP_770062.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. viciae 3841] gi|115258872|emb|CAK09980.1| putative porphobilinogen deaminase [Rhizobium leguminosarum bv. viciae 3841] Length = 309 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 163/306 (53%), Positives = 217/306 (70%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A E R LM H +P I+ L+TKGDRIT+R+L EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEDMFEIVVLTTKGDRITDRSLAEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E+KL +GE+D AVHSAKDM TKL +GL +SAYLPREDIRD I TA+ L D Sbjct: 61 KGLFTEELEQKLTAGELDFAVHSAKDMATKLPEGLYLSAYLPREDIRDAVIGRTARKLID 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R DI+V+ FRG +ETRL KL + A LLA AG+KRL Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVVTFRGLVETRLRKLEEGEVDATLLALAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K V+ +IL+ + FPP+P QGAICIE+ + + + +L+ +N T+D+V+CERAFLA L Sbjct: 181 KVDVLTDILDPDTFPPAPAQGAICIESRIGDARIDDLLAPVNDIMTFDTVSCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R + Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300 Query: 301 NKNVFN 306 F+ Sbjct: 301 GSAFFD 306 >gi|87302648|ref|ZP_01085465.1| porphobilinogen deaminase [Synechococcus sp. WH 5701] gi|87282992|gb|EAQ74949.1| porphobilinogen deaminase [Synechococcus sp. WH 5701] Length = 317 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 105/309 (33%), Positives = 148/309 (47%), Gaps = 5/309 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ R L H P I I ++T+GD+I + L +IG Sbjct: 1 MAGTTLRIASRRSQLAMVQTHWVRDELTRAH--PDLEISIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117 KGLFT+E+E +++ D AVHS KD+PT L GL + RED D + H S Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPDGLMLGCITEREDPADALVLHERHRGCS 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L SV+GTSSLRR A L D RG + TRL KL++ ++LA AG+ Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRHHFPHFQFKDVRGNVITRLEKLDSGDYDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +++ + GQGA+ IE + E +KV+ H T ERAFL Sbjct: 179 RLGLGHRIDALIDPSISLHAVGQGALGIECRHGDSAVLEQIKVLEHLPTARRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +L+G C+ I + +G L G+V + DG G + D +G AQ +R Sbjct: 239 RQLEGGCQVPIGVNSRFEGEELVLTGMVASLDGLRLIRDEARGPQQDPEAVGTSLAQLLR 298 Query: 298 FISNKNVFN 306 + Sbjct: 299 SQGAGEILE 307 >gi|145220050|ref|YP_001130759.1| porphobilinogen deaminase [Prosthecochloris vibrioformis DSM 265] gi|189028096|sp|A4SFJ8|HEM3_PROVI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|145206214|gb|ABP37257.1| porphobilinogen deaminase [Chlorobium phaeovibrioides DSM 265] Length = 313 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 121/307 (39%), Positives = 172/307 (56%), Gaps = 6/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG G Sbjct: 2 KKQLIIGTRSSPLALWQAEYTKAEL--SRHFPDLDITLKLVKTTGDVLLDSPLSKIGDMG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT++IEK LI+ EID AVHS KD+PT +GL ISA+ RED RDV IS + DL Sbjct: 60 LFTKDIEKFLIAKEIDLAVHSLKDVPTATPEGLIISAFTEREDTRDVIISKNGVKMLDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ + TSSLRR + L R D + D RG + TR K + + A++LAYAG+ RL Sbjct: 120 KNAKVATSSLRRMSQLKSLRPDFDIKDIRGNLNTRFQKFDEGEFDAMMLAYAGVYRLNFS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EIL E P+ GQGA+ IET V++ + +E+VKV+NH +T ER+ L L G Sbjct: 180 DRISEILPHEIMLPAVGQGALGIETRVDDEQTREIVKVMNHSNTEYCCKAERSLLRHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNG--NRCDAINIGRDAAQYIRF 298 C+ I +A K TL+ V + DG I +E+++ G + A G + A+ + Sbjct: 240 GCQIPIGSYASFKNGTLHLLAFVGSVDGTKGIRNEITKTGLTSPAQAEAAGIELAEELLK 299 Query: 299 ISNKNVF 305 + + Sbjct: 300 QGAEEIL 306 >gi|78185247|ref|YP_377682.1| porphobilinogen deaminase [Synechococcus sp. CC9902] gi|123770934|sp|Q3AWQ4|HEM3_SYNS9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78169541|gb|ABB26638.1| hydroxymethylbilane synthase [Synechococcus sp. CC9902] Length = 317 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 105/308 (34%), Positives = 155/308 (50%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLTITVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117 KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + H + Sbjct: 59 KGLFTKELEAQMLVGRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVLHAKNKHLN 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L +V+GTSSLRR A L + D RG + TRL KL++ ++LA AG+ Sbjct: 119 LATLPEGAVVGTSSLRRLAQLRHHYPHLEFKDVRGNVITRLEKLDSGAYDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I + + + + GQGA+ IE N P E++KV+ H T ERAFL Sbjct: 179 RLGFADRIDQSIPGDISLHAVGQGALGIECVENQPDVMEIIKVLEHGPTSQRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I +G L G+V + DGK +G D +IG + A ++ Sbjct: 239 RELEGGCQVPIGVNTRFEGDQLILTGMVASLDGKRLIREQASGPSTDPESIGLELAATLK 298 Query: 298 FISNKNVF 305 + + Sbjct: 299 GLGAGEIL 306 >gi|2495180|sp|Q43082|HEM3_PEA RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase; Flags: Precursor gi|313724|emb|CAA51820.1| hydroxymethylbilane synthase [Pisum sativum] Length = 369 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 142/307 (46%), Positives = 190/307 (61%), Gaps = 6/307 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR LM H I I+ + T GD+I ++ L +IGGKGL Sbjct: 62 IRIGTRGSPLALAQAHETRDKLMASHTELAEEGAIQIVIIKTTGDKILSQPLADIGGKGL 121 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A SL DL Sbjct: 122 FTKEIDEALINGDIDIAVHSMKDVPTYLPEETILPCNLPREDVRDAFISLSAASLADLPA 181 Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SVIGT+SLRRK+ +L ++V D FRG ++TRL KL+ A LLA AG+KRL Sbjct: 182 GSVIGTASLRRKSQILHRYPSLTVQDNFRGNVQTRLRKLSEGVVKATLLALAGLKRLNMT 241 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + L+I+D P+ QGAI I N+ K E + +NHE+T +++CERAFL LDG Sbjct: 242 ENVTSTLSIDDMLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAISCERAFLTTLDG 301 Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFI 299 SC++ IAG+A K F G+V + DG E SR G+ D + IG+DA + + Sbjct: 302 SCRTPIAGYASRDKDGNCLFRGLVASPDGTRVLETSRIGSYTYEDMMKIGKDAGEELLSR 361 Query: 300 SNKNVFN 306 + FN Sbjct: 362 AGPGFFN 368 >gi|37522781|ref|NP_926158.1| porphobilinogen deaminase [Gloeobacter violaceus PCC 7421] gi|55976479|sp|Q7NGF7|HEM3_GLOVI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|35213783|dbj|BAC91153.1| porphobilinogen deaminase [Gloeobacter violaceus PCC 7421] Length = 328 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 106/309 (34%), Positives = 154/309 (49%), Gaps = 7/309 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + IG+R S LAL R L H P I+ + T+GD+I + L +IG KG Sbjct: 2 SRTVIIGSRDSQLALVQTHWVRDELQRAH--PDIRFEIVEMKTQGDKILDVALAKIGDKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 LFT+E+E ++ D AVHS KD+PT L GL + A RED D I L Sbjct: 60 LFTKELESAMLEKRTDLAVHSLKDLPTALPPGLILGAITEREDPSDAVIVRRGLEAAGLA 119 Query: 120 DLALHSVIGTSSLRRKALLLRWRSD-ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 DL +V+GTSSLRR A L + + D RG + TRL KL+ + AI+LA AG++R Sbjct: 120 DLPEGAVVGTSSLRRLAQLKHHYGERLRFQDIRGNLNTRLRKLDEGRYDAIVLAVAGMRR 179 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + I E+L+ + + GQGA+ IE + + +L+ V+NH T ERA L Sbjct: 180 LGWSERISEVLSPDISLHAVGQGALGIECREADGEILDLLTVLNHPPTARRCRAERAMLR 239 Query: 239 ELDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L+G C+ I + L GIV + DG+ R+G +GR A+ ++ Sbjct: 240 ALEGGCQVPIGVYTELDDSGRLTLQGIVASLDGRNMARACRSGPGDAPEALGRAVAEDLK 299 Query: 298 FISNKNVFN 306 + + + Sbjct: 300 AAGAQAILD 308 >gi|311069308|ref|YP_003974231.1| porphobilinogen deaminase [Bacillus atrophaeus 1942] gi|310869825|gb|ADP33300.1| porphobilinogen deaminase [Bacillus atrophaeus 1942] Length = 313 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 117/305 (38%), Positives = 165/305 (54%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + ++G+R S LA+ L ++ P + I + TKGDRI + TL+++GGKGL Sbjct: 2 RTIKVGSRRSKLAMTQTKWVIKKLEEI--DPSYTFEIKEIVTKGDRILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L++ +ID AVHS KDMP L +GL I RED RD IS Q L D+ Sbjct: 60 FVKEIEQALLNEDIDMAVHSMKDMPASLPEGLTIGCIPKREDPRDALISKRHQKLSDIKE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 VIGTSSLRR A LL R D+++ RG I+TRL+KL AI+LA AG+ R+ + Sbjct: 120 GGVIGTSSLRRSAQLLVERPDLTIKWIRGNIDTRLHKLETEDYDAIILAAAGLSRMGWKD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++G Sbjct: 180 DVVTEFLEPERCLPAVGQGALAIECRESDEELLRLFSQFTDEYTKRTVLAERAFLNAMEG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + G+V + DGK + GN D IG+ A + Sbjct: 240 GCQVPIAGYATINDQDEVQLTGLVASPDGKTIFKEKVAGN--DPEEIGKRCAALMSDKGA 297 Query: 302 KNVFN 306 K + + Sbjct: 298 KALID 302 >gi|332284596|ref|YP_004416507.1| porphobilinogen deaminase [Pusillimonas sp. T7-7] gi|330428549|gb|AEC19883.1| porphobilinogen deaminase [Pusillimonas sp. T7-7] Length = 315 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 111/308 (36%), Positives = 164/308 (53%), Gaps = 4/308 (1%) Query: 1 MEKKP--FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M + P I TR S LAL A R L ++ P + ++ ++T+GD+I +R+L+++ Sbjct: 1 MSEAPAKLVIATRASRLALWQAEHVRDRLQTLY--PQCQVSLLTMTTRGDQILDRSLSKV 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLF +E+E L+ G D AVHS KD+P + +S L R+D RD F+S+ SL Sbjct: 59 GGKGLFVKELETALLDGRADLAVHSLKDVPVDMQSPFALSVILERDDPRDAFVSNDYSSL 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 DL SV+GTSSLRR+A + + + V RG ++TRL KL+ AI+LA AG++R Sbjct: 119 DDLPAGSVVGTSSLRREAQIRQRYPQLQVQPLRGNLDTRLGKLDRGDYAAIILASAGLRR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L E I+ LN E P+ GQGA+ IE + Q + ++ DT ERA Sbjct: 179 LGLEARIRSHLNPEQSLPAAGQGALGIEILESRSDMQTWLAPLSDPDTTACALAERAVSR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L GSC+ +A FA G+TL G+V DG +G+ A +G A + Sbjct: 239 VLGGSCQVPLAAFAQRDGNTLMVRGLVAEPDGSRIIRAQVSGDVSQAEELGVRIANELLE 298 Query: 299 ISNKNVFN 306 + + + Sbjct: 299 EGARIILD 306 >gi|56421180|ref|YP_148498.1| porphobilinogen deaminase [Geobacillus kaustophilus HTA426] gi|61213219|sp|Q5KWK6|HEM3_GEOKA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|56381022|dbj|BAD76930.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Geobacillus kaustophilus HTA426] Length = 309 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 118/304 (38%), Positives = 174/304 (57%), Gaps = 5/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + L + P + + TKGDR+ + TL+++GGKGL Sbjct: 2 RNIVVGSRRSKLALTQTKWVINELKQLGA--PFTFEVKEIVTKGDRVLDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE +L++G ID AVHS KDMP L +GL I A RED RDV +S + L DL Sbjct: 60 FVKEIEHELLAGGIDMAVHSMKDMPAVLPEGLVIGAVSRREDARDVLVSKGNRMLSDLPP 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 SVIGTSSLRR A LL +R D+++ RG I+TRL KL + + AI+LA AG+ R+ + Sbjct: 120 GSVIGTSSLRRSAQLLAYRPDLTIKWIRGNIDTRLAKLESEEYDAIVLAAAGLARMGWGD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI + L + P+ GQGA+ +E ++ + ++ + +N E T +V ERAFL +++G Sbjct: 180 DVISDYLPFDVCVPAVGQGALAVECREDDDELRQWLSRLNDEQTERAVRAERAFLQQMEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+A K T+ +V + DGK ++ G D +GR AA + K Sbjct: 240 GCQVPIAGYAEVKEGTVRLTALVASPDGKEMYKEIVTG--ADPEAVGRQAAAILSEQGAK 297 Query: 303 NVFN 306 + Sbjct: 298 ALIE 301 >gi|212703312|ref|ZP_03311440.1| hypothetical protein DESPIG_01355 [Desulfovibrio piger ATCC 29098] gi|212673272|gb|EEB33755.1| hypothetical protein DESPIG_01355 [Desulfovibrio piger ATCC 29098] Length = 311 Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 158/305 (51%), Gaps = 3/305 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K I TR S LAL A ++ L + P NI + + T+GD I + L+++GGKG Sbjct: 2 RKNLVIATRGSQLALWQAEHVKACLESLE--PGLNISLRVIKTRGDIILDVPLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L+ G D AVHS KD+P L +GL + RE D +S+ SL +L Sbjct: 60 LFVKEIEEALLDGSADLAVHSIKDVPMVLPEGLVLGCVPQREICVDCLLSNRYGSLDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR+A LL R D+ ++ RG ++TRL K+ + AI+LA AG+KRL Sbjct: 120 PGARVGTSSLRRQAQLLNLRPDLEILSLRGNVDTRLRKMKEGEYDAIVLASAGLKRLGLS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 F P+ GQGA+ IE ++ + EL+ + H T V ER FLA LDG Sbjct: 180 ADRMHHFEAASFVPAVGQGALGIECRGDDGEVLELLSRMEHRPTRICVEAERGFLAGLDG 239 Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG A G+V DG + + G A G A+++ Sbjct: 240 GCQVPIAGHAEMLDDDRFILDGLVAEVDGSVILREQQEGTAATARETGFALARHLLDKGG 299 Query: 302 KNVFN 306 K++ + Sbjct: 300 KDILD 304 >gi|308174513|ref|YP_003921218.1| porphobilinogen deaminase [Bacillus amyloliquefaciens DSM 7] gi|307607377|emb|CBI43748.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus amyloliquefaciens DSM 7] gi|328554432|gb|AEB24924.1| porphobilinogen deaminase [Bacillus amyloliquefaciens TA208] gi|328912836|gb|AEB64432.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus amyloliquefaciens LL3] Length = 313 Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 169/305 (55%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + ++G+R S LA+ + L +++ P +N I + TKGDRI + TL+++GGKGL Sbjct: 2 RTIKVGSRRSKLAMTQTKWVINKLKELN--PSYNFEIQEIVTKGDRILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+ EID AVHS KDMP L +GL I RED RD IS Q L D+ Sbjct: 60 FVKEIEQALLHQEIDMAVHSMKDMPAVLPEGLVIGCIPKREDPRDALISKGHQKLDDIKE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +IGTSSLRR A +L R D+++ RG I+TRL KL AI+LA AG+ R+ + Sbjct: 120 GGIIGTSSLRRSAQILAERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L + P+ GQGA+ IE ++ + +L E T +V ERAFL ++G Sbjct: 180 DVVSEFLEPDRCLPAVGQGALAIECRESDEELLKLFAQFTDEYTKRTVAAERAFLHAMEG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + G+V + DGK ++ + G+ D IG+ A + Sbjct: 240 GCQVPIAGYASVNDRDEVELVGLVASPDGKTIYKETAAGH--DPEEIGKRCAAMMSEKGA 297 Query: 302 KNVFN 306 K + + Sbjct: 298 KALID 302 >gi|78212229|ref|YP_381008.1| porphobilinogen deaminase [Synechococcus sp. CC9605] gi|123729770|sp|Q3ALS9|HEM3_SYNSC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78196688|gb|ABB34453.1| porphobilinogen deaminase [Synechococcus sp. CC9605] Length = 317 Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats. Identities = 105/308 (34%), Positives = 153/308 (49%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLKITVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117 KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + + A Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNAKNQAYK 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L SV+GTSSLRR A L + D RG + TRL KL++ ++LA AG+ Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRHHYPHLIFKDVRGNVITRLEKLDSGDYDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +++ E + GQGA+ IE P+ E +KV+ H T ERAFL Sbjct: 179 RLGFSDRIHQLIPGEISLHAVGQGALGIECVEGKPEVLEAIKVLEHTPTSQRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I +G L G+V + DGK +G +A IG A ++ Sbjct: 239 RELEGGCQVPIGVNTRFEGDQLILTGMVASLDGKRLIRDQTSGEASEAEAIGIALANTLK 298 Query: 298 FISNKNVF 305 + Sbjct: 299 GQGAGEIL 306 >gi|328871819|gb|EGG20189.1| porphobilinogen deaminase [Dictyostelium fasciculatum] Length = 318 Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats. Identities = 113/315 (35%), Positives = 163/315 (51%), Gaps = 10/315 (3%) Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M KK IG+R S LAL L ++H +N + L T GDR+ N L++IG Sbjct: 1 MSDKKTVYIGSRKSQLALVQTHHVIDRLKELHGS-KYNFELKTLDTVGDRVLNVALSKIG 59 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ--- 116 KGLFT+E+E +ISG+ID AVHS KD+PTK +GL + A RE+ D FI + ++ Sbjct: 60 DKGLFTKELEDLMISGDIDIAVHSLKDIPTKFPEGLGLGAITKRENCLDAFIVNASKHRP 119 Query: 117 --SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAY 173 +L +L ++IG+SSLRR + L R + D RG + TR KL + + ++LA Sbjct: 120 TCTLAELPEGAIIGSSSLRRVSQLKRAYPHLQFKDIRGNLNTRFEKLEKSGEYDGMILAV 179 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG++RL I EI+ + GQGA+ IE N+P L++ +N +DT E Sbjct: 180 AGLERLGWTDRITEIIQPTVSLYAVGQGALGIECRSNDPLIMSLLEPLNDKDTASCCIAE 239 Query: 234 RAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 RA L+EL+G C I + + GIVL DG +S G +GR+ Sbjct: 240 RAMLSELEGGCHVPIGVISSIDVERQLITLEGIVLNLDGSRAIRLSHTGPLASCHQVGRE 299 Query: 292 AAQYIRFISNKNVFN 306 AQ + K + N Sbjct: 300 LAQQLIEKGAKEILN 314 >gi|126463094|ref|YP_001044208.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17029] gi|126104758|gb|ABN77436.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17029] Length = 322 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 133/303 (43%), Positives = 183/303 (60%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGLF Sbjct: 19 PLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGLF 78 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE+ L+SG ID AVHS KDMPT +GL + YLPRED RD FI+ L DL Sbjct: 79 TREIEEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFAEGGLADLPQG 138 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK +V Sbjct: 139 ATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMNEV 198 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + E+ + QGAI IE ++P+AQE++ I+ T + ER+FL +LDGSC Sbjct: 199 PRVPIEPEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVPTGHRLAAERSFLLKLDGSC 258 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A +G L+ G +L DG G DA +G + A + + + Sbjct: 259 ETPIAGLAILEGDQLWLRGEILRPDGSESISGEIRGAIADAAALGVELASELLGRAPADF 318 Query: 305 FNF 307 F++ Sbjct: 319 FSW 321 >gi|217964297|ref|YP_002349975.1| porphobilinogen deaminase [Listeria monocytogenes HCC23] gi|290893957|ref|ZP_06556933.1| porphobilinogen deaminase [Listeria monocytogenes FSL J2-071] gi|254800254|sp|B8DHJ2|HEM3_LISMH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|217333567|gb|ACK39361.1| porphobilinogen deaminase [Listeria monocytogenes HCC23] gi|290556495|gb|EFD90033.1| porphobilinogen deaminase [Listeria monocytogenes FSL J2-071] gi|307571137|emb|CAR84316.1| hemC [Listeria monocytogenes L99] Length = 309 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 114/307 (37%), Positives = 168/307 (54%), Gaps = 7/307 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PAFDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + +L +L Sbjct: 60 LFVSEVEQALSDKTIDFAVHSMKDVPSSLKEGLVIGAIPKRESPLDCFVFNQVNALDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 120 HGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL + Sbjct: 180 ENTTLKLEDIPPELCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKK 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ IAGFA ++F G+V +DG I E + G + IG A+ + Sbjct: 240 LNGGCEIPIAGFATKANEAVHFKGLVGNADGSIILEAEQTG--ANPSEIGNKVAEDLLSK 297 Query: 300 SNKNVFN 306 + Sbjct: 298 GADTIIQ 304 >gi|241206704|ref|YP_002977800.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860594|gb|ACS58261.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 309 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 164/306 (53%), Positives = 217/306 (70%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A E R LM H +P I+ L+TKGDRIT+R+L EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEDMFEIVVLTTKGDRITDRSLAEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E+KL +GE+D AVHSAKDM TKL +GL +SAYLPREDIRD I TA+ L D Sbjct: 61 KGLFTEELEQKLAAGELDFAVHSAKDMATKLPEGLYLSAYLPREDIRDAVIGRTARKLID 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R DI+VI FRG +ETRL KL + A LLA AG+KRL Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVITFRGLVETRLRKLEQGEVDATLLALAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K V+ +IL+ + FPP+P QGAICIE+ + + + +L+ +N T+D+V+CERAFLA L Sbjct: 181 KVDVLTDILDPDTFPPAPAQGAICIESRIGDARVDDLLAPVNDGPTFDTVSCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R + Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300 Query: 301 NKNVFN 306 F+ Sbjct: 301 GSAFFD 306 >gi|317154529|ref|YP_004122577.1| porphobilinogen deaminase [Desulfovibrio aespoeensis Aspo-2] gi|316944780|gb|ADU63831.1| porphobilinogen deaminase [Desulfovibrio aespoeensis Aspo-2] Length = 310 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 109/303 (35%), Positives = 161/303 (53%), Gaps = 2/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL A + L H P + ++ + TKGD+I + L ++GGKGL Sbjct: 2 KQLTIATRGSALALWQANHIKDRLEAEH--PGLTVHLLKIKTKGDKILDVPLAKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+ G AVHS KD+PT+L +GL++ RE D +S + L L Sbjct: 60 FVKEIEEALLDGRAQLAVHSMKDVPTELPEGLEVGVIPEREASTDSLLSVKYEGLAGLPR 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR++ L R D+ + RG ++TR+ KL + AI++A AG+ RL+ Sbjct: 120 GAVVGTSSLRRQSQLATLRPDLKIESLRGNLDTRVRKLLAGEFDAIVVATAGLNRLELTA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 EIL DF P+ QGA+ IE H N + +++ +NHE + V ER FL LDG Sbjct: 180 PKHEILGPPDFLPAVAQGALGIEYHSANAEVAAMLQFLNHEPSKRQVLAERGFLTGLDGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IA ++ G L G V DG ++ G +A +IG A+ + K Sbjct: 240 CQVPIAAWSVIDGERLRLTGFVADVDGSRPIRMTAEGPVDNAWDIGAALAEKVLAAGGKA 299 Query: 304 VFN 306 + + Sbjct: 300 ILD 302 >gi|62259213|gb|AAX77846.1| unknown protein [synthetic construct] Length = 335 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 109/306 (35%), Positives = 169/306 (55%), Gaps = 5/306 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 +E K I +R S LAL ++ + IP I + T+GD I ++ L +IGG Sbjct: 25 LEMKQITIASRESKLALWQTNFVKNRIQLELNIP---CEISTMKTQGDIILDQPLNKIGG 81 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K LF +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ D Sbjct: 82 KALFMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDD 141 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ Sbjct: 142 LPKGAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLE 201 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL Sbjct: 202 LVERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQEL 261 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C AI +A + + +V +SDGK + G+ D +G+ AQ + + Sbjct: 262 KGGCHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALG 319 Query: 301 NKNVFN 306 + Sbjct: 320 AYKILE 325 >gi|88813066|ref|ZP_01128308.1| porphobilinogen deaminase [Nitrococcus mobilis Nb-231] gi|88789699|gb|EAR20824.1| porphobilinogen deaminase [Nitrococcus mobilis Nb-231] Length = 309 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ RI TR SPLAL A + L + P + ++ ++T+GDRI + L IGG Sbjct: 1 MSRRRLRIATRKSPLALWQAEHVAAELRR--RYPELEVELVAMTTRGDRILDTPLARIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K LF +E+E+ + G D AVHS KD+P +L +G+ + L RED D F+++ Q L Sbjct: 59 KALFVKELERGIWEGRADIAVHSIKDVPAELPEGMHLPVVLEREDPCDAFVANLYQDLAA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + + +GT+SLRR+ L R D+ V RG ++TRL KL + K AI+LA AG++RL Sbjct: 119 LPIGARVGTASLRRECQLRAQRPDLRVGTLRGNVQTRLAKLESGKFDAIVLAAAGLRRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L E P+ GQGA+ IE ++ + EL+ + H ++ + ERA A L Sbjct: 179 LAERIRCTLTPEQSLPAVGQGALGIECRSDDREINELIAPLTHSPSYLRITAERAVNARL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +GSC+ IA FA GS ++ +V + DG G +++G A+ + Sbjct: 239 EGSCQVPIAAFAVLDGSNIWLRALVGSRDGSCVLRGEIRGPAGTGVSLGGQLAEDLLSRG 298 Query: 301 NKNVF 305 + Sbjct: 299 AAELL 303 >gi|297617596|ref|YP_003702755.1| porphobilinogen deaminase [Syntrophothermus lipocalidus DSM 12680] gi|297145433|gb|ADI02190.1| porphobilinogen deaminase [Syntrophothermus lipocalidus DSM 12680] Length = 316 Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats. Identities = 120/302 (39%), Positives = 173/302 (57%), Gaps = 2/302 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL A L D P H I + TKGD+IT+ L++IG KGLF Sbjct: 10 KVRIGTRGSRLALWQANYVVKRLRDC--FPGHEFEITVIKTKGDKITDVALSKIGDKGLF 67 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+EIE L+ EID AVHS KD+PT L +G++++A L RE+ DV +S SL L Sbjct: 68 TKEIEMALLREEIDIAVHSLKDLPTTLPEGIRLAAVLERENPLDVLLSFKGYSLSGLPRG 127 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGTSSLRR A L R R DI ++ RG +ETR+ K+ + I+LAYAG+KR+ + Sbjct: 128 ARIGTSSLRRTAQLKRLRPDIETVNLRGNVETRIRKMEDEGLDGIVLAYAGVKRMGFLHL 187 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + EIL+ + P+ GQG I +E + A+ELVK +NH+ TW + ERAFL ++G C Sbjct: 188 VTEILHPDQVIPAVGQGVIALEIKEDGKVAEELVKPLNHQPTWAEITAERAFLKAIEGGC 247 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + A + L G+V + DG++ + +G+ A +G + A+ I + ++ Sbjct: 248 QVPCGCHASYQEGYLTVDGLVASLDGQVVYRDRVSGSEAFAQQLGEELARRILAMGGGSL 307 Query: 305 FN 306 Sbjct: 308 LE 309 >gi|281203457|gb|EFA77657.1| porphobilinogen deaminase [Polysphondylium pallidum PN500] Length = 324 Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats. Identities = 108/311 (34%), Positives = 156/311 (50%), Gaps = 9/311 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + IG+R S LA+ SL ++H P I + T GDR+ N L++IG K Sbjct: 6 NRDTIIIGSRKSQLAMVQTESVMKSLQELH--PNLKFEIKTMDTVGDRVLNVALSKIGDK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH----TAQS 117 GLFT+E+E ++SG ID AVHS KD+PTK +GL + A RE+ D FI+H Sbjct: 64 GLFTKELEDLMLSGHIDIAVHSLKDLPTKFPEGLSLGAITKRENCFDAFIAHPKYGKDAR 123 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGI 176 L + +VIG+SSLRR + L R + D RG + TR NKL + + ++LA AG+ Sbjct: 124 LSSMPEGAVIGSSSLRRVSQLKRAYPQLQFKDIRGNLNTRFNKLETSGEYDGMILAVAGL 183 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 +RL I E+L E + GQGA+ IE ++ Q L+ +NH +T ERA Sbjct: 184 ERLGWTDRITEVLQPEVSLYAVGQGALGIECRSDDEFVQSLLAPLNHYETAQCCAAERAM 243 Query: 237 LAELDGSCKSAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 L EL+G C I + S L G+VL+ DG +S G +G+ A Sbjct: 244 LRELEGGCHVPIGVNTTLEQNNSILSIEGVVLSLDGTKSIRLSHRGEIDQPEIVGKQLAL 303 Query: 295 YIRFISNKNVF 305 ++ + Sbjct: 304 MLKEKGATEIL 314 >gi|124025263|ref|YP_001014379.1| porphobilinogen deaminase [Prochlorococcus marinus str. NATL1A] gi|158512743|sp|A2C0V4|HEM3_PROM1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123960331|gb|ABM75114.1| Porphobilinogen deaminase [Prochlorococcus marinus str. NATL1A] Length = 315 Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats. Identities = 103/309 (33%), Positives = 154/309 (49%), Gaps = 5/309 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ R L H P I I ++T+GD+I + L +IG Sbjct: 1 MTLDQLRIASRRSQLAMVQTNWVRDELQRAH--PDLAITIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117 KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + + Sbjct: 59 KGLFTKELEAQMLLGHAEIAVHSLKDLPTNLPEGLILGCITEREDPSDALVVNEKNQIHK 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L SV+GTSSLRR A L + D RG + TRL KL++ + ++LA AG++ Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRYHYPHLVFKDVRGNVITRLEKLDSGEYDCLILAAAGLQ 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +++ + + GQGA+ IE K +++K + HE T ER+FL Sbjct: 179 RLGFANRIHQLIPTDISLHAVGQGALGIECVSGQQKVLDILKTLEHESTSKRCLAERSFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + L G+V + DGK + G+ A IG D A ++ Sbjct: 239 RELEGGCQVPIGVRTEINNNELILEGMVASLDGKRLIRDIKKGSVSSAEEIGIDLANELK 298 Query: 298 FISNKNVFN 306 + Sbjct: 299 GRGAGEILE 307 >gi|13473577|ref|NP_105145.1| porphobilinogen deaminase [Mesorhizobium loti MAFF303099] gi|23821698|sp|Q98EI7|HEM3_RHILO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|14024327|dbj|BAB50931.1| hydroxymethylbilane synthase [Mesorhizobium loti MAFF303099] Length = 308 Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats. Identities = 142/304 (46%), Positives = 205/304 (67%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +IGTR SPLALA A ET++ LM H +P ++ +ST GDRI +R L+E GGKG Sbjct: 2 QTTLKIGTRGSPLALAQAHETQARLMAAHGLPAEAFEVVVISTSGDRIQDRPLSEAGGKG 61 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+EIE+ L++G ID AVHS+KDMPT+L GL++SA+LPRED RD F+ A+++ DL Sbjct: 62 LFTKEIEEALLAGAIDIAVHSSKDMPTQLPDGLELSAFLPREDARDAFVGKAAKTIADLL 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +G+SSLRR+AL+ R R D+ V+ FRG ++TRL KL+ A +LAYAG+KRL E Sbjct: 122 RGAKVGSSSLRRQALIRRMRPDLDVVMFRGNVQTRLRKLDEGVAAGTILAYAGLKRLGLE 181 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V +++ ++ FPP+PGQGAI IET + + ++++ I+ T ++ CERAFLA LDG Sbjct: 182 HVATDLMPLDIFPPAPGQGAIGIETRIGDRAVEKMLVAIHDVPTGQALACERAFLAALDG 241 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC++ IAG A + L F G++++ DG H V G DA IG +AA+ +R + + Sbjct: 242 SCRTPIAGHATIETGNLSFAGLIISPDGTQSHTVELQGPAQDAARIGDEAARTVRAKAGE 301 Query: 303 NVFN 306 F+ Sbjct: 302 KFFD 305 >gi|15615608|ref|NP_243912.1| porphobilinogen deaminase [Bacillus halodurans C-125] gi|11386834|sp|Q9K8G0|HEM3_BACHD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|10175668|dbj|BAB06765.1| porphobilinogen deaminase [Bacillus halodurans C-125] Length = 311 Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 166/305 (54%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + IG+R S LAL S L + P + I + TKGD+I + TL+++GGKGL Sbjct: 2 RKIIIGSRRSQLALTQTEWVISKLKEAGA--PFDFEIKKIITKGDQILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ + + EID AVHS KD+P+ L +G + A R D RD IS+ +L +L Sbjct: 60 FVKEIEQAMANKEIDIAVHSMKDVPSVLQEGFALGATTTRVDPRDALISNEGYTLAELPA 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 S++GTSSLRR A +L R D+ V RG IETRL KL AI+LA AG++R+ Sbjct: 120 GSIVGTSSLRRSAQILAKRPDLEVKWIRGNIETRLRKLKEEDFDAIILAAAGLERMGWSN 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +++ E L+ + P+ GQGA+ IE ++ + E++K IN + T +V ER FL ++G Sbjct: 180 EIVTEYLDPDLCVPAVGQGALGIECRADDDEVLEMLKTINDDTTAKTVLAERTFLHRMEG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + +V DG+ + G D + +G AQ + Sbjct: 240 GCQVPIAGYATLTDEGEIELTALVGTPDGEQIFKEILRGK--DPVQLGETMAQALMDQGA 297 Query: 302 KNVFN 306 K V Sbjct: 298 KEVLE 302 >gi|327439433|dbj|BAK15798.1| porphobilinogen deaminase [Solibacillus silvestris StLB046] Length = 310 Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats. Identities = 113/299 (37%), Positives = 168/299 (56%), Gaps = 5/299 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + L + P + + + TKGDRI + L+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFINELKEAGV--PFDFEVKEIVTKGDRILDVQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L EID AVHS KDMP L +GL I PRED RD FIS+ DL Sbjct: 60 FVKEIEQALYDKEIDFAVHSMKDMPAVLPEGLIIGCIPPREDARDAFISNGHVKFADLPK 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +++GTSSLRR A LL+ R D+ + RG ++TRL KL AI+LA AG+KRL + Sbjct: 120 GAIVGTSSLRRSAQLLQARPDLEIKWIRGNVDTRLKKLETEDFDAIILAAAGLKRLGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +V+ E L+ + P+ QG++ IE ++ + E + + TW + + ER+FLA +DG Sbjct: 180 EVVTEYLDTDICLPAVAQGSLGIECRADDTELLEQLTKLTDATTWATAHAERSFLAAMDG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A +G T+ G+V A D + ++ + G DA +G+ A + Sbjct: 240 GCQVPIAGYATVEGDTITLTGLVAAPDASVTYKETLTGT--DADAVGKAVAAKLTEQGA 296 >gi|110635531|ref|YP_675739.1| porphobilinogen deaminase [Mesorhizobium sp. BNC1] gi|110286515|gb|ABG64574.1| hydroxymethylbilane synthase [Chelativorans sp. BNC1] Length = 309 Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats. Identities = 153/306 (50%), Positives = 203/306 (66%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ +IGTR S LALA A ETR+ LM H +P I+ + T GDRI +R L+E GG Sbjct: 1 MQTDVIKIGTRGSALALAQAAETRARLMVAHGLPEDAFEIVVIRTSGDRIQDRPLSEAGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+ G ID AVHS+KDMPT L GL++SA+L RED+RDVFI A+ L+D Sbjct: 61 KGLFTKEIEEALLEGRIDLAVHSSKDMPTFLPDGLELSAFLEREDVRDVFIGRAAKRLED 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+AL LR R D+ V FRG ++TRL KL + A LLA AG+KRLK Sbjct: 121 LPHGANLGTSSLRRQALALRLRPDLKVGVFRGNVQTRLRKLEDGAADGTLLALAGLKRLK 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E V E+++ FPP+ GQGAICIE+ + + +LV+ I+H T +++CERAFLA L Sbjct: 181 LEHVATELMDPVIFPPALGQGAICIESRTGDTRIAKLVEAIHHPATGFALSCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ +AG A G + F G++L DG+ HE+ +G DA IGRDA + IR + Sbjct: 241 DGSCRTPMAGLATVDGDRIAFSGMILTPDGREVHEIGGDGAAQDAAEIGRDAGRRIRQKA 300 Query: 301 NKNVFN 306 F Sbjct: 301 GAGFFE 306 >gi|253575681|ref|ZP_04853017.1| porphobilinogen deaminase [Paenibacillus sp. oral taxon 786 str. D14] gi|251845019|gb|EES73031.1| porphobilinogen deaminase [Paenibacillus sp. oral taxon 786 str. D14] Length = 320 Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats. Identities = 113/318 (35%), Positives = 161/318 (50%), Gaps = 14/318 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDV--HKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M K+ +GTR S LAL + L + P + I + TKGDRI + TL+++ Sbjct: 1 MTKRTIVVGTRQSQLALTQTGQVIDDLKAICREHHLPFDFEIRKIVTKGDRILDVTLSKV 60 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLF +EIE+ +++GEID AVHS KDMP+ L GL A R D RD IS +SL Sbjct: 61 GGKGLFVKEIEQAMLNGEIDLAVHSMKDMPSVLPDGLMNGAVPRRVDPRDALISRNGRSL 120 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L + +GTSSLRR + L +R D + RG I++RL KL AI+LA AG+ R Sbjct: 121 DELPQGAKVGTSSLRRASQLRAYRPDFVLEPIRGNIDSRLRKLEEEGFDAIILAAAGLFR 180 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E I L E P+ GQGA+ IE ++ + + L+ + N DT +V ER FL Sbjct: 181 MGWEHRITAFLPAEVCLPAVGQGALGIECREDDDEVRRLLSLYNDPDTAVTVAAERRFLG 240 Query: 239 ELDGSCKSAIAGFAYCKGST----------LYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 L+G C+ I +A L G+V ++DG + S G D + Sbjct: 241 VLNGGCQVPIGAYATLLPEEGASGETGRPRLRLTGMVGSADGTTILKESAEGT--DPTEL 298 Query: 289 GRDAAQYIRFISNKNVFN 306 G A + + + Sbjct: 299 GEQLAGRLISMGAAALLQ 316 >gi|258514534|ref|YP_003190756.1| porphobilinogen deaminase [Desulfotomaculum acetoxidans DSM 771] gi|257778239|gb|ACV62133.1| porphobilinogen deaminase [Desulfotomaculum acetoxidans DSM 771] Length = 309 Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats. Identities = 111/302 (36%), Positives = 164/302 (54%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +GTR S LAL A L + + P ++ I + T GD I + L +IG KGL Sbjct: 2 REIVVGTRDSQLALWQANWVVDRLRE--RNPGYSFRIQGIKTHGDNILDVALAKIGDKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E L+S EID AVHS KD+PT L GL + A RE DV +S L L Sbjct: 60 FTKELEVALLSDEIDLAVHSMKDLPTDLPGGLAVGAVCEREYPGDVLVSSQGYVLDKLPE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +VIGTSSLRR A LL +R D+ +++ RG + TRL K++ K ++LAYAGI+RL + Sbjct: 120 GAVIGTSSLRRTAQLLHYRQDLRIVNIRGNLNTRLRKMDEEKLDGVVLAYAGIQRLGLKD 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I E + +E P+ GQG+I IE + + ++V+ I H + +V+ ER FL L+G Sbjct: 180 RITERIPMEICLPAVGQGSIGIEIRHLDEEIMDIVETIEHRPSRIAVSAERNFLKRLEGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I + G+ + F G++ + DGK G +A IG A+ + + Sbjct: 240 CQVPIGAYGLVIGNEIKFEGLIASLDGKHLVRDVIAGPVNEAAKIGVKLAESLLKKGGRE 299 Query: 304 VF 305 + Sbjct: 300 IL 301 >gi|255558669|ref|XP_002520359.1| porphobilinogen deaminase, putative [Ricinus communis] gi|223540457|gb|EEF42025.1| porphobilinogen deaminase, putative [Ricinus communis] Length = 372 Score = 365 bits (938), Expect = 4e-99, Method: Composition-based stats. Identities = 141/307 (45%), Positives = 188/307 (61%), Gaps = 6/307 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR LM H I I+ + T GD+I + L +IGGKGL Sbjct: 65 IRIGTRGSPLALAQAHETRDKLMAKHSELAEEGAIQIVIIKTTGDKILTQPLADIGGKGL 124 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+GEID AVHS KD+PT L + + LPRED+RD FIS +A SL +L Sbjct: 125 FTKEIDEALINGEIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSASSLAELPS 184 Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SVIGT+SLRRK+ +L +SV++ FRG ++TRL KLN A LLA AG+KRL Sbjct: 185 GSVIGTASLRRKSQILHRYPSLSVLENFRGNVQTRLRKLNEGVVQATLLALAGLKRLNMT 244 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + +L+I+D P+ QGAI I N+ K + +NHE+T +V CERAFL LDG Sbjct: 245 ENVTSVLSIDDMLPAVAQGAIGIACRSNDDKMANYLASLNHEETRLAVACERAFLETLDG 304 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFI 299 SC++ IAG+A + F G+V + DG E SR G D I +G+DA + + Sbjct: 305 SCRTPIAGYASKDENGDCIFKGLVASPDGTRVLETSRKGPYALDDMIMMGKDAGKELLLQ 364 Query: 300 SNKNVFN 306 + F+ Sbjct: 365 AGPGFFD 371 >gi|325129681|gb|EGC52495.1| porphobilinogen deaminase [Neisseria meningitidis OX99.30304] gi|325203630|gb|ADY99083.1| porphobilinogen deaminase [Neisseria meningitidis M01-240355] Length = 311 Score = 365 bits (938), Expect = 4e-99, Method: Composition-based stats. Identities = 103/306 (33%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 ARELIG 304 >gi|118496750|ref|YP_897800.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella tularensis subsp. novicida U112] gi|194324057|ref|ZP_03057832.1| porphobilinogen deaminase [Francisella tularensis subsp. novicida FTE] gi|208779979|ref|ZP_03247322.1| porphobilinogen deaminase [Francisella novicida FTG] gi|158512415|sp|A0Q481|HEM3_FRATN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|118422656|gb|ABK89046.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella novicida U112] gi|194321954|gb|EDX19437.1| porphobilinogen deaminase [Francisella tularensis subsp. novicida FTE] gi|208743983|gb|EDZ90284.1| porphobilinogen deaminase [Francisella novicida FTG] Length = 300 Score = 365 bits (938), Expect = 4e-99, Method: Composition-based stats. Identities = 105/303 (34%), Positives = 167/303 (55%), Gaps = 5/303 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKAL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E +++ + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 59 FMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ + Sbjct: 119 GAIVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELVE 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C AI +A + + +V +SDGK + G+ D +G+ AQ + + Sbjct: 239 CHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAYK 296 Query: 304 VFN 306 + Sbjct: 297 ILE 299 >gi|89894971|ref|YP_518458.1| hypothetical protein DSY2225 [Desulfitobacterium hafniense Y51] gi|219669373|ref|YP_002459808.1| porphobilinogen deaminase [Desulfitobacterium hafniense DCB-2] gi|123091755|sp|Q24VC8|HEM3_DESHY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800248|sp|B8G2M2|HEM3_DESHD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|89334419|dbj|BAE84014.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219539633|gb|ACL21372.1| porphobilinogen deaminase [Desulfitobacterium hafniense DCB-2] Length = 308 Score = 365 bits (938), Expect = 5e-99, Method: Composition-based stats. Identities = 122/301 (40%), Positives = 174/301 (57%), Gaps = 4/301 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LAL A + L + + P V++P+ TKGD+I + L +IG KGLFT Sbjct: 4 VKIGTRDSQLALWQAEWVKRKLEEYY--PEREFVLVPMKTKGDKILDVPLAKIGDKGLFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L++GEIDCAVHS KD+PT L GL+I+A+ RE+ RDVF+S L L S Sbjct: 62 KELEVGLLNGEIDCAVHSLKDLPTVLPPGLEIAAFCEREEPRDVFLSKDGTPLGSLPAGS 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +IGTSSLRRKA L +RSD+S D RG ++TR KL + I+LA AG+KRL E I Sbjct: 122 IIGTSSLRRKAQLQNYRSDLSFADLRGNLQTRWRKLQESDMAGIVLAAAGVKRLGWEDRI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E ++ E + GQGAI +E +E++ ++NH DT +V ERA L L+G C+ Sbjct: 182 TEYISEEIMLSAVGQGAIAVEIAAQRADVREMLDLLNHGDTERAVKAERALLYRLEGGCQ 241 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 I +A + + G+V + DG+ +V+ +G +GR AA + + Sbjct: 242 IPIGAWAVTEQQQIVLKGMVASLDGQRILKVTLSG--EHPEELGRQAADLLIAQGALEIL 299 Query: 306 N 306 Sbjct: 300 Q 300 >gi|261393090|emb|CAX50687.1| porphobilinogen deaminase (PBG; hydroxymethylbilane synthase; HMBS; pre-uroporphyrinogen synthase) [Neisseria meningitidis 8013] Length = 311 Score = 365 bits (938), Expect = 5e-99, Method: Composition-based stats. Identities = 103/306 (33%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 ARELIG 304 >gi|222151551|ref|YP_002560707.1| porphobilinogen deaminase homolog [Macrococcus caseolyticus JCSC5402] gi|254800255|sp|B9E743|HEM3_MACCJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|222120676|dbj|BAH18011.1| porphobilinogen deaminase homolog [Macrococcus caseolyticus JCSC5402] Length = 307 Score = 365 bits (938), Expect = 5e-99, Method: Composition-based stats. Identities = 115/304 (37%), Positives = 172/304 (56%), Gaps = 5/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L H P I I + TKGD+I N L+++GGKGL Sbjct: 2 RKIIVGSRRSKLALTQSQQFIDQLKRKH--PNLEIEIKEIVTKGDQIVNVQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L G ID A+HS KD+P+ L +GL + RED RD +I+ L +L Sbjct: 60 FVKEIEQALYDGTIDFAIHSLKDVPSVLPEGLTLGCIPVREDARDAYIAKHHIPLHELKP 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S++GTSSLRR A LL + + RG I+TRL KL + AI+LA AG+ R+ +K Sbjct: 120 GSIVGTSSLRRGAQLLDQYPHLEIKWIRGNIDTRLAKLRDEDYDAIILAAAGLNRMGWDK 179 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ E LN E P+ GQGA+ IE ++ + L+K ++ E+T ER FL +DG Sbjct: 180 SIVTEYLNPELMLPAIGQGALGIECRSDDAEVLALLKSVHDEETELCTEAERTFLRLMDG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC+ IAG A G ++ F G++++ DGK ++V+ +G + I IG A+ + K Sbjct: 240 SCQVPIAGHATMVGESIEFTGLIMSPDGKEKYKVTHSG--GNPIEIGTQVAKAMEQNGAK 297 Query: 303 NVFN 306 + Sbjct: 298 AIIE 301 >gi|147677307|ref|YP_001211522.1| porphobilinogen deaminase [Pelotomaculum thermopropionicum SI] gi|189028095|sp|A5D3L5|HEM3_PELTS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|146273404|dbj|BAF59153.1| porphobilinogen deaminase [Pelotomaculum thermopropionicum SI] Length = 312 Score = 365 bits (937), Expect = 5e-99, Method: Composition-based stats. Identities = 112/303 (36%), Positives = 168/303 (55%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +GTR S LA+ A L ++ P + I+ + T GDRI + L +IG KG Sbjct: 2 KREIAVGTRVSKLAMWQARWVVDRLKEL--CPGCSFRIVGIRTLGDRILDAALVKIGDKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E ++ GEID AVHS KD+PT+L +GL I A RE DV +S + L +L Sbjct: 60 LFTKELEAAMLRGEIDMAVHSMKDLPTELPEGLVIGAVCKREHPADVLVSRRGKKLDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL +R D+ +++ RG I TRL KL A +LAYAG+ R+ ++ Sbjct: 120 GGALVGTSSLRRCAQLLWYRDDLRMVNLRGNINTRLRKLEEENLDAAVLAYAGLFRMGRQ 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I +++ + P+ GQG+I +E ++ + ELVK I+H ++ +V ERAFL L+G Sbjct: 180 DAITQVIPFDICLPAVGQGSIGVEVRSDDGEVLELVKKIDHRESRLAVFAERAFLRRLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ + + L G+V DGK GN DA IG A+ + + Sbjct: 240 GCQVPVGALGTVENDRLRLEGVVATPDGKQLVRSFVEGNGGDAAAIGLRLAEKLLELGAG 299 Query: 303 NVF 305 + Sbjct: 300 EIL 302 >gi|146276603|ref|YP_001166762.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17025] gi|145554844|gb|ABP69457.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17025] Length = 322 Score = 365 bits (937), Expect = 5e-99, Method: Composition-based stats. Identities = 130/303 (42%), Positives = 183/303 (60%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGLF Sbjct: 19 PLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGLF 78 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE+ L+ G ID AVHS KDMPT +GL + YLPRED RD FI++ L DL Sbjct: 79 TREIEEALLDGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITYAEGGLADLPQG 138 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK + V Sbjct: 139 ATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMDDV 198 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + E+ + QGAI IE +++P+ QE++ I+ T + ER+FL +LDGSC Sbjct: 199 PRVAIEPEEMLSAVAQGAIGIERRIDDPRTQEMLAAIHDVPTGHRLAAERSFLLKLDGSC 258 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A +G ++ G +L DG G DA +G + A + + + Sbjct: 259 ETPIAGLAVLEGDQIWLRGEILRPDGSESISGEIRGGIPDAAALGAELASELLGRAPSDF 318 Query: 305 FNF 307 F++ Sbjct: 319 FSW 321 >gi|328675303|gb|AEB27978.1| Porphobilinogen deaminase [Francisella cf. novicida 3523] Length = 300 Score = 365 bits (937), Expect = 5e-99, Method: Composition-based stats. Identities = 102/303 (33%), Positives = 169/303 (55%), Gaps = 5/303 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LAL + + IP I + T+GD I ++ L ++GGK L Sbjct: 2 KQITIASRESKLALWQTNFVKKYIQKELNIP---CEITTMKTQGDIILDKPLNKVGGKAL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E + +G+ + AVHS KD+P +L +G +++++PRED RD F+S+ S+ DL Sbjct: 59 FMKELEIAMQNGKANIAVHSLKDVPYQLPQGFCLASFMPREDPRDAFVSNKYSSIDDLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRRKA LL +R D+ + D RG ++TRL+KL++ + AI+LA AG+ RL+ + Sbjct: 119 GAIVGTSSLRRKAQLLHYRDDLVIKDLRGNVQTRLSKLDSGEYDAIILASAGLIRLELNE 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +E P+ GQG + IE + + E ++ +N ++ ERAF EL G Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALDRDVELLEKLQKLNCSTSFRMATAERAFNQELKGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C AI +A + + +V +SDGK + G+ D +G+ A+ + + Sbjct: 239 CHVAIGAYAELNNNQITLTAMVASSDGKKILKRKMIGD--DPTKVGKLLAREMIELGAYK 296 Query: 304 VFN 306 + Sbjct: 297 ILE 299 >gi|149204076|ref|ZP_01881044.1| porphobilinogen deaminase [Roseovarius sp. TM1035] gi|149142518|gb|EDM30563.1| porphobilinogen deaminase [Roseovarius sp. TM1035] Length = 315 Score = 365 bits (937), Expect = 5e-99, Method: Composition-based stats. Identities = 133/303 (43%), Positives = 184/303 (60%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR SPLALA AFETR+ L +P I+ + T GD+I +R L EIGGKGLF Sbjct: 11 PLKIGTRGSPLALAQAFETRARLGAAFDLPEEAFEIVVIKTTGDQIIDRPLKEIGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE+ +++G+ID AVHS KDMP +GL + YLPRED+RD F+S T SL DL Sbjct: 71 TREIEQAMLTGDIDIAVHSMKDMPVLQPEGLLLDTYLPREDVRDAFVSPTVASLADLPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S++GTSSLRRKA +L + V++FRG ++TRL KL + A LA AG+ RL + +V Sbjct: 131 SLVGTSSLRRKAQVLVAYPHLEVVEFRGNVQTRLKKLEDGVAACTFLAMAGLNRLGRSEV 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ + P+ QGAI IE ++ +A E++ I+H++T + ERAFLA LDGSC Sbjct: 191 ATCAIDADVMLPAVAQGAIGIERRADDTRAAEMLAAIHHKETGQRLVSERAFLAALDGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A GSTL G +L DG ++ D +GR A + + Sbjct: 251 ETPIAGLAELNGSTLRLRGEILRPDGSESLTDDQSAPIEDGAELGRAMAAKLLAQAGPGF 310 Query: 305 FNF 307 F++ Sbjct: 311 FDW 313 >gi|89255577|ref|YP_512938.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica LVS] gi|156501520|ref|YP_001427585.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010342|ref|ZP_02275273.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica FSC200] gi|187932192|ref|YP_001892177.1| porphobilinogen deaminase [Francisella tularensis subsp. mediasiatica FSC147] gi|254368575|ref|ZP_04984591.1| hydroxymethylbilane synthase [Francisella tularensis subsp. holarctica FSC022] gi|290954410|ref|ZP_06559031.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica URFT1] gi|295312152|ref|ZP_06802958.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica URFT1] gi|123401648|sp|Q2A5R3|HEM3_FRATH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166217773|sp|A7N9H6|HEM3_FRATF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238058914|sp|B2SE34|HEM3_FRATM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|89143408|emb|CAJ78581.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella tularensis subsp. holarctica LVS] gi|156252123|gb|ABU60629.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica FTNF002-00] gi|157121478|gb|EDO65669.1| hydroxymethylbilane synthase [Francisella tularensis subsp. holarctica FSC022] gi|187713101|gb|ACD31398.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella tularensis subsp. mediasiatica FSC147] Length = 300 Score = 365 bits (937), Expect = 5e-99, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 167/303 (55%), Gaps = 5/303 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKAL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 59 FMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ + Sbjct: 119 GAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELVE 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C AI +A + + +V +SDGK + G+ D +G+ AQ + + Sbjct: 239 CHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAYK 296 Query: 304 VFN 306 + Sbjct: 297 ILE 299 >gi|308070414|ref|YP_003872019.1| Porphobilinogen deaminase [Paenibacillus polymyxa E681] gi|305859693|gb|ADM71481.1| Porphobilinogen deaminase [Paenibacillus polymyxa E681] Length = 308 Score = 365 bits (937), Expect = 6e-99, Method: Composition-based stats. Identities = 108/304 (35%), Positives = 165/304 (54%), Gaps = 4/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMD--VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +G+R S LAL L + V+ + TKGDRI + TL+++GGK Sbjct: 2 RTIVVGSRQSALALTQTGHVIEDLNALCAEQGMDLQFVVKKILTKGDRILDVTLSKVGGK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +EIE+ +++GEID AVHS KDMP++L +GL A RED RD I+ A+SL+DL Sbjct: 62 GLFVKEIEQAMLAGEIDMAVHSMKDMPSELPEGLVNGAVPHREDPRDCLITLGAKSLEDL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSSLRR + + R D+ + RG I++RL KL AI+LA AG+ R+ Sbjct: 122 PQGAKVGTSSLRRASQIKSMRPDLQLEPVRGNIDSRLKKLETEGFDAIILAAAGLHRMGW 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 ++ I + D P+ GQGA+ IE ++ + L+++ N DT +V ER FL L+ Sbjct: 182 KERITSYIPEADCLPAVGQGALGIECRASDEELLALLRLYNDRDTSATVAAERTFLGVLN 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I A G + G+V + DG++ + + GN D +G A + Sbjct: 242 GGCQVPIGAHAVWAGQEISLTGMVGSPDGEVILKETLQGN--DPQKLGEAVAASLIAKGA 299 Query: 302 KNVF 305 + + Sbjct: 300 EQIL 303 >gi|255658552|ref|ZP_05403961.1| hydroxymethylbilane synthase [Mitsuokella multacida DSM 20544] gi|260849356|gb|EEX69363.1| hydroxymethylbilane synthase [Mitsuokella multacida DSM 20544] Length = 315 Score = 365 bits (937), Expect = 6e-99, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 170/306 (55%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ IGTR S LAL A L + P + ++TKGD+I + L +IGG Sbjct: 1 MKNDTIVIGTRSSKLALWQADYVADCLRK--RYPELRVEKKLMTTKGDKILDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ +++G ID AVHS KDMPT++ +GL ISA R D D +S ++L++ Sbjct: 59 KGLFTKELEQDMLAGGIDIAVHSLKDMPTEVPEGLVISAITERFDPGDAVVSPKYRTLEN 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRRKA LL R D+ + D RG + TRL KL AI+LA AG+KRL Sbjct: 119 LPQGAKVGTSSLRRKAQLLHARPDLQISDLRGNVNTRLEKLEREHFDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E+L E P+ GQGA+ IET N+ + + L+ +N E T ERAFLA + Sbjct: 179 FADRITEVLPREMVLPAVGQGALAIETRENDREVRNLIAFLNDEATVACARAERAFLARV 238 Query: 241 DGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ + +A + L+ ++ + DG + + G+ +A ++G A + + Sbjct: 239 EGGCQVPVGVYAVPEAEGRLHVEAVIASLDGARLYRDAAVGSAAEAESLGTALADKLLAM 298 Query: 300 SNKNVF 305 + Sbjct: 299 GGIAIL 304 >gi|222150055|ref|YP_002551012.1| porphobilinogen deaminase [Agrobacterium vitis S4] gi|221737037|gb|ACM38000.1| porphobilinogen deaminase [Agrobacterium vitis S4] Length = 309 Score = 365 bits (937), Expect = 6e-99, Method: Composition-based stats. Identities = 164/306 (53%), Positives = 212/306 (69%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A ETR L H + P I+ LST GDRIT+R+L EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAHETRERLATAHGLSPDMFEIVVLSTTGDRITDRSLAEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT E+E++L+SG +D AVHS+KDMPT L GL+ISAYLPRED+RD FI TA L + Sbjct: 61 KGLFTLELEQQLLSGGLDFAVHSSKDMPTALPDGLEISAYLPREDMRDAFIGRTAPKLLE 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LA +VIG++SLRR+AL+ R R D+ VI +RG +ETRL KL + A LLA AG+KRL Sbjct: 121 LAEGAVIGSASLRRQALIRRLRPDLQVITYRGAVETRLRKLAAGEVDATLLAVAGLKRLD 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 KE VI + L++E FPP+P QGAICIE V++ + Q+L+ INH T+D+V+CERAFLA L Sbjct: 181 KETVITQYLDLESFPPAPAQGAICIEARVDDRRIQDLLAPINHRPTFDAVSCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG+A G + G +L DG++ H V G D + +G A + +R + Sbjct: 241 DGSCRTPIAGYAISDGEMIRLTGTILTPDGQVSHSVEAEGRCADGLALGWSAGEKVRDKA 300 Query: 301 NKNVFN 306 F Sbjct: 301 GPGFFE 306 >gi|313623622|gb|EFR93785.1| porphobilinogen deaminase [Listeria innocua FSL J1-023] Length = 309 Score = 364 bits (936), Expect = 6e-99, Method: Composition-based stats. Identities = 117/306 (38%), Positives = 165/306 (53%), Gaps = 7/306 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSNWVIKKLKENY--PEIDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L ID AVHS KD+P+ L GL I A RE D F+ + +L DL Sbjct: 60 LFVSEVEQALSDEVIDFAVHSMKDVPSSLKDGLVIGAIPKRESPLDCFVFNEVSTLDDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR A LL+ R D V RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 120 KGAVIGTSSLRRAAQLLKHRPDFVVKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E ++ E P+ GQGA+ IE + + ++ I+HE+T V ER FL + Sbjct: 180 ENPSLKLEDISPELCLPAVGQGALAIECRETDLQICNMLASIHHEETGICVEAERVFLKK 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ IAGFA G +++F G+V +DG I E R G IG A+ + Sbjct: 240 LNGGCEIPIAGFATKTGDSVHFKGLVGNADGSIILESERTG--ASPAEIGNQVAEELLSE 297 Query: 300 SNKNVF 305 + Sbjct: 298 GADTII 303 >gi|307103191|gb|EFN51453.1| hypothetical protein CHLNCDRAFT_33052 [Chlorella variabilis] Length = 361 Score = 364 bits (936), Expect = 6e-99, Method: Composition-based stats. Identities = 131/312 (41%), Positives = 189/312 (60%), Gaps = 6/312 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIG 59 K +IGTR SPLALA A+ TR L + II + T GD+I N+ L++IG Sbjct: 50 ATKTLKIGTRGSPLALAQAYLTRDLLKSTFPELNEEGALEIIIIKTTGDKILNQPLSDIG 109 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLFT+EI+ L+ G ID AVHS KD+PT L G + LPRED+RDVFIS +S+ Sbjct: 110 GKGLFTKEIDDALLDGRIDIAVHSMKDVPTYLPAGTVLPCNLPREDVRDVFISAKYKSIA 169 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +V+G++SLRR+A +L + V++FRG ++TRL KL A LLA AG+KRL Sbjct: 170 ELPEGAVVGSASLRRQAQILAKYPTLQVVNFRGNVQTRLRKLQEGACDATLLALAGLKRL 229 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 IL+ ++ P+ QGAI I + ++ + +NHE+T ++ CERAFLA Sbjct: 230 GLADKATSILSTDEMLPAVAQGAIGIACREGDDRSAAALAALNHEETRLAIVCERAFLAA 289 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIR 297 LDGSC++ IAG+A+ L F G+V DGK +E +R G+ +A IG+DA ++ Sbjct: 290 LDGSCRTPIAGWAHKADGQLAFRGLVSTPDGKKMYETTRTGSLTEDEARAIGQDAGTELK 349 Query: 298 FISNKN--VFNF 307 + ++ VF++ Sbjct: 350 QQAQQDGTVFDW 361 >gi|325294749|ref|YP_004281263.1| Porphobilinogen deaminase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065197|gb|ADY73204.1| Porphobilinogen deaminase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 311 Score = 364 bits (936), Expect = 7e-99, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 174/306 (56%), Gaps = 6/306 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL + + + K P + +I ++TKGD+I + L +IG KGLF Sbjct: 2 KIRIGTRKSKLALWQSEWVKEQIEK--KFPEVEVELIKITTKGDKILDVPLAKIGDKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+EIE ++ GE+D AVHS KD+P+KL +GL++ A+ RED RD +S +L L Sbjct: 60 TKEIEDAMLKGEVDIAVHSLKDVPSKLPEGLKLIAFSDREDPRDALLSCGKYTLDTLPEG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRRKA L R D+ + D RG ++TR+ KL + AI+LA AG+KRL E Sbjct: 120 AVVGTSSLRRKAQLRILRPDLEIRDLRGNVDTRIRKLKEEQYDAIILAAAGVKRLGWENE 179 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDGS 243 I EIL+ + PS QG + IE ++P+ + +VK IN ++ + ERAFL ++G Sbjct: 180 IDEILSSDKMIPSVSQGILGIEGREDDPEIERIVKEAINSRESEIAATVERAFLRTVEGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS---RNGNRCDAINIGRDAAQYIRFIS 300 C+ + +A + ++ + +G+ +++ + N +A +G A+ + Sbjct: 240 CQVPLGCYAVVVENRVHVRAFISDLNGRFYYKEEGVFKVENLEEADMVGTGVAERLLSAG 299 Query: 301 NKNVFN 306 K + + Sbjct: 300 GKKILD 305 >gi|226942049|ref|YP_002797123.1| porphobilinogen deaminase [Laribacter hongkongensis HLHK9] gi|254800253|sp|C1D679|HEM3_LARHH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226716976|gb|ACO76114.1| Hem3 [Laribacter hongkongensis HLHK9] Length = 308 Score = 364 bits (936), Expect = 7e-99, Method: Composition-based stats. Identities = 105/303 (34%), Positives = 160/303 (52%), Gaps = 2/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R SPLA+ A R+ L ++ P + I+ ++T+GDRI ++TL +IGGKGL Sbjct: 2 KQVVIASRESPLAMWQAEHIRARLQALY--PGLEVSILGITTQGDRILDKTLNKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E + G+ D AVHS KD+P L +G ++A RED RD F+S SL +L Sbjct: 60 FVKELELAMQEGQADLAVHSIKDVPMDLPEGFALAAICEREDPRDAFVSSRYASLSELPA 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GT+SLRR++ + + V RG ++TRL KL+ + AI+LA +G+KR+ + Sbjct: 120 GAVVGTASLRRESQIRARYPHLLVKPLRGNLQTRLRKLDEGQYDAIILAASGLKRMGLAE 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L+ D P+ GQGA+ IE + L+ +NH T+ V ERA L S Sbjct: 180 RIRMELSTADSLPAVGQGALGIEIRADRTDLMALLAPLNHPATYACVTAERAMGRALGAS 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ + G+A L G V DG A +GR A+ + + Sbjct: 240 CQIPVGGYAEQHEHMLVMRGFVATPDGTTLLHAEATAPAEYADALGRTIAKKLLDQGADD 299 Query: 304 VFN 306 V + Sbjct: 300 VID 302 >gi|323699104|ref|ZP_08111016.1| porphobilinogen deaminase [Desulfovibrio sp. ND132] gi|323459036|gb|EGB14901.1| porphobilinogen deaminase [Desulfovibrio desulfuricans ND132] Length = 310 Score = 364 bits (936), Expect = 7e-99, Method: Composition-based stats. Identities = 112/303 (36%), Positives = 163/303 (53%), Gaps = 2/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL A + L H P ++ ++ + TKGD+I + L ++GGKGL Sbjct: 2 KKLTIATRGSALALWQANHIKDRLEAEH--PGLSVDLLKIKTKGDKILDVPLAKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+ G AVHS KD+PT+L GL++ RE+ D +S L L Sbjct: 60 FVKEIEEALLDGRAQLAVHSMKDVPTELPDGLEVGIIPEREEATDSLLSVKYDGLAGLPE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR++ L R D+ + RG ++TRLNKL N + AI+LA AG+KRL Sbjct: 120 GAVVGTSSLRRQSQLCALRPDLKIETLRGNLDTRLNKLLNGEYDAIVLATAGLKRLAMSA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +EIL+ +F P+ QGA+ IE + + ++L+ ++H T V ER FL LDG Sbjct: 180 PKQEILSPPEFLPAVAQGALGIEFRSADTEVRDLLAFLDHAPTKHQVLAERGFLTGLDGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IA ++ +G TL G V DG GN A ++G A + K Sbjct: 240 CQVPIAAWSVIEGETLRLTGYVAEVDGSTPIRRMVEGNVAHAWDLGMILAGQVLEAGGKA 299 Query: 304 VFN 306 + + Sbjct: 300 ILD 302 >gi|72383664|ref|YP_293019.1| porphobilinogen deaminase [Prochlorococcus marinus str. NATL2A] gi|123773715|sp|Q46GS7|HEM3_PROMT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|72003514|gb|AAZ59316.1| hydroxymethylbilane synthase [Prochlorococcus marinus str. NATL2A] Length = 315 Score = 364 bits (936), Expect = 7e-99, Method: Composition-based stats. Identities = 103/309 (33%), Positives = 153/309 (49%), Gaps = 5/309 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ R L H P I I ++T+GD+I + L +IG Sbjct: 1 MTLDQLRIASRRSQLAMVQTNWVRDELQREH--PDLVITIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117 KGLFT+E+E +++ G + AVHS KD+PT L GL + RED D + + Sbjct: 59 KGLFTKELEAQMLLGHAEIAVHSLKDLPTNLPDGLILGCITKREDPSDALVVNEKNQIHK 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L SV+GTSSLRR A L + D RG + TRL KL++ + ++LA AG++ Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRYHYPHLVFKDVRGNVITRLEKLDSGEYDCLILAAAGLQ 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +++ + + GQGA+ IE K +++K + HE T ER+FL Sbjct: 179 RLGFANRIHQLIPTDISLHAVGQGALGIECVSGQQKVLDILKTLEHESTSKRCLAERSFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + L G+V + DGK + G+ A IG D A ++ Sbjct: 239 RELEGGCQVPIGVRTEINNNELILEGMVASLDGKRLIRDIKKGSVSSAEEIGIDLANELK 298 Query: 298 FISNKNVFN 306 + Sbjct: 299 GRGAGEILE 307 >gi|255640018|gb|ACU20300.1| unknown [Glycine max] Length = 356 Score = 364 bits (936), Expect = 7e-99, Method: Composition-based stats. Identities = 142/306 (46%), Positives = 187/306 (61%), Gaps = 6/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A+ETR LM H I I+ + T GD+I + L +IGGKGL Sbjct: 49 IRIGTRGSPLALAQAYETRDKLMASHPDLAEEGAIEIVIIKTTGDKILTQPLADIGGKGL 108 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ L++ EID AVHS KD+PT L + LPRED+RD FIS TA SL DL Sbjct: 109 FTKEIDEALLNSEIDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLTAASLADLPP 168 Query: 124 HSVIGTSSLRRKALLLRWRSDISV-IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SVIGT+SLRRK+ +L ++V +FRG ++TRL KLN A LLA AG+KRL Sbjct: 169 ASVIGTASLRRKSQILHRYPSLNVQENFRGNVQTRLRKLNEGVVQATLLALAGLKRLSMT 228 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + IL+I+D P+ QGAI I ++ K E + +NHE+T +V CERAFL LDG Sbjct: 229 ENVTSILSIDDMLPAVAQGAIGIACRSDDDKMAEYIDSLNHEETRLAVVCERAFLQTLDG 288 Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFI 299 SC++ IAG+A + F G+V + DG E SR G D I +G+DA + + Sbjct: 289 SCRTPIAGYACRNEDGNCLFRGLVASPDGTRVLETSRVGPYAVEDMIEMGKDAGKELLSR 348 Query: 300 SNKNVF 305 + N F Sbjct: 349 AGPNFF 354 >gi|149199469|ref|ZP_01876504.1| Prolyl 4-hydroxylase, alpha subunit [Lentisphaera araneosa HTCC2155] gi|149137404|gb|EDM25822.1| Prolyl 4-hydroxylase, alpha subunit [Lentisphaera araneosa HTCC2155] Length = 307 Score = 364 bits (936), Expect = 7e-99, Method: Composition-based stats. Identities = 112/301 (37%), Positives = 167/301 (55%), Gaps = 3/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR S LAL A +S L++V P I + + T+GD+I + +L +IGGKGLF Sbjct: 2 KLRIATRGSQLALWQAEHVKSRLLEV--DPSLEIELKIIKTQGDKILDVSLAKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE+ ++ E D AVHS KD+P +L +GL + A L RED RD F+S+ +SL +L Sbjct: 60 VKEIEQAMMDDEADLAVHSMKDVPAELPEGLILQAILEREDPRDAFVSNKYKSLDELPEG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR + L R + RG + TRL KL+++K AI+LA AG+ RL+ Sbjct: 120 AVVGTSSLRRASQLYRQYP-VKTELLRGNVNTRLAKLDDDKYDAIILAAAGLIRLEFGDR 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + L+ + F PSPGQGA+ IE ++ + L+ +NH +T V ER F + GSC Sbjct: 179 IADSLDPDKFIPSPGQGAVGIECREDDAELCALLNKLNHTETSIRVKVEREFNLAIGGSC 238 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A G + V + DGK ++ +G+ D G + A + + Sbjct: 239 QVPAGCYATIDGDSFELRAFVASPDGKEYYREDMSGDLKDLPGKGTEIANKLIARGAAEI 298 Query: 305 F 305 Sbjct: 299 I 299 >gi|124022436|ref|YP_001016743.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9303] gi|158512753|sp|A2C7L8|HEM3_PROM3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123962722|gb|ABM77478.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9303] Length = 317 Score = 364 bits (936), Expect = 7e-99, Method: Composition-based stats. Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ ++ L H P +I + ++T+GD+I + L +IG Sbjct: 1 MVLTQLRIASRRSQLAMVQTNWVQAELEQAH--PGLSISVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117 KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + + Sbjct: 59 KGLFTKELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVNQKNAEHQ 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L +++GTSSLRR A L + D RG + TRL KL+ ++LA AG+ Sbjct: 119 LDTLPEGAIVGTSSLRRLAQLRHHYPHLVFKDVRGNVITRLEKLDAGNYDCLILAAAGLT 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +++ E + GQGA+ IE +P+ E++K + H+ T ERA L Sbjct: 179 RLGFGDRIHQLIPSEISLHAVGQGALGIECVEGHPEVLEVIKALEHKPTAQRCLAERALL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + + + L G+V + DGK + G IG++ A+ ++ Sbjct: 239 RELEGGCQVPIGVNSRIEANELLLTGMVASLDGKRLIRDQQRGPIDRCEAIGKELAETLK 298 Query: 298 FISNKNVF 305 + Sbjct: 299 SQGAGEIL 306 >gi|328676207|gb|AEB27077.1| Porphobilinogen deaminase [Francisella cf. novicida Fx1] Length = 300 Score = 364 bits (936), Expect = 8e-99, Method: Composition-based stats. Identities = 107/303 (35%), Positives = 167/303 (55%), Gaps = 5/303 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKAL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 59 FMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ + Sbjct: 119 GAVVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELVE 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C AI +A + + +V +SDGK + G+ D +G+ AQ + + Sbjct: 239 CHVAIGAYAELYNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAYK 296 Query: 304 VFN 306 + Sbjct: 297 ILE 299 >gi|330804637|ref|XP_003290299.1| porphobilinogen deaminase [Dictyostelium purpureum] gi|325079586|gb|EGC33179.1| porphobilinogen deaminase [Dictyostelium purpureum] Length = 319 Score = 364 bits (936), Expect = 8e-99, Method: Composition-based stats. Identities = 100/314 (31%), Positives = 166/314 (52%), Gaps = 11/314 (3%) Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M ++ IG+R S LA+ R L +++ P + I + T GD++ + +L++IG Sbjct: 1 MSERNTVYIGSRKSQLAMLQTEWVRDRLQELN--PNIKVEIKTMDTTGDKVLDVSLSKIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH-----T 114 KGLFT+E+E +++G +D AVHS KD+PT+L GL++ A R D FI++ Sbjct: 59 DKGLFTKELEDMMLNGSVDLAVHSLKDIPTRLPDGLKLGAITKRYSTSDAFIANVKKHGK 118 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLA 172 L DL ++IG+SSLRR A L + + D RG + TR NKL+ +++ ++LA Sbjct: 119 DCKLSDLPNGALIGSSSLRRVAQLKKSYPHLQFKDIRGNLNTRFNKLDAVDSEYDGMILA 178 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 AG++R+ I +++ E + GQGA+ IE N+P +++++ +NH ++ Sbjct: 179 VAGLERMNLTDRISQVIPDEISLYAVGQGALGIECKENDPFIEKILEPLNHSESMMRCKA 238 Query: 233 ERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 ER+ L EL+G C I + + L GIVL DG + E G +G+D Sbjct: 239 ERSMLRELEGGCHVPIGVVTKINQNNILEIKGIVLNLDGSKYIESYIEGPVEQYEQLGKD 298 Query: 292 AAQYIRFISNKNVF 305 A + +K + Sbjct: 299 IAADLIKKGSKEIL 312 >gi|291044525|ref|ZP_06570234.1| porphobilinogen deaminase [Neisseria gonorrhoeae DGI2] gi|293397661|ref|ZP_06641867.1| porphobilinogen deaminase [Neisseria gonorrhoeae F62] gi|291011419|gb|EFE03415.1| porphobilinogen deaminase [Neisseria gonorrhoeae DGI2] gi|291611607|gb|EFF40676.1| porphobilinogen deaminase [Neisseria gonorrhoeae F62] Length = 313 Score = 364 bits (936), Expect = 8e-99, Method: Composition-based stats. Identities = 106/306 (34%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 3 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 61 KGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 121 MPEGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 181 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG I + A +GR A+ + Sbjct: 241 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKLADDG 300 Query: 301 NKNVFN 306 + + Sbjct: 301 AQELIG 306 >gi|33863541|ref|NP_895101.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9313] gi|39931399|sp|Q7V697|HEM3_PROMM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|33640990|emb|CAE21448.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9313] Length = 317 Score = 364 bits (935), Expect = 8e-99, Method: Composition-based stats. Identities = 99/308 (32%), Positives = 154/308 (50%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ ++ L H P +I + ++T+GD+I + L +IG Sbjct: 1 MVLTQLRIASRRSQLAMVQTNWVQAELEQAH--PGLSISVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117 KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + + Sbjct: 59 KGLFTKELEAQMLVGRADIAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVNQKNAEHQ 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L +++GTSSLRR A L + D RG + TRL KL+ ++LA AG+ Sbjct: 119 LDTLPEGAIVGTSSLRRLAQLRHHYPHLVFKDVRGNVITRLEKLDAGNYDCLILAAAGLT 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +++ E + GQGA+ IE +P+ E +K + H+ T ERA L Sbjct: 179 RLGFGDRIHQLIPSEISLHAVGQGALGIECVEGHPEVLEAIKALEHKPTAQRCLAERALL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + + + L G+V + DGK + G IG++ A+ ++ Sbjct: 239 RELEGGCQVPIGVNSRIEANELLLTGMVASLDGKRLIRDQQRGPIDRCEAIGKELAETLK 298 Query: 298 FISNKNVF 305 + Sbjct: 299 SQGAGEIL 306 >gi|315282478|ref|ZP_07870883.1| porphobilinogen deaminase [Listeria marthii FSL S4-120] gi|313613876|gb|EFR87615.1| porphobilinogen deaminase [Listeria marthii FSL S4-120] Length = 309 Score = 364 bits (935), Expect = 8e-99, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 170/306 (55%), Gaps = 7/306 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L Sbjct: 60 LFVSEVEQALSDKAIDFAVHSMKDVPSSLKEGLVIGAIPKRESPLDCFVFNQVSSLDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 120 KGAVIGTSSLRRAAQLLKHRPDFIIKPIRGNIDTRLQKLHAENFDAIILAKAGLSRMGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E + E P+ GQGA+ IE ++ + ++++ ++HE+T V ER FL + Sbjct: 180 ENTTLKLEDIPAELCLPAVGQGALAIECRESDQQIRDMLASVHHEETGVCVEAERVFLKK 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ IAGFA G ++F G+V +DG + E + G + +IG A+ + Sbjct: 240 LNGGCEIPIAGFAAKTGDVIHFKGLVGNADGSVILESEQTGT--NPSDIGNQVAEDLLSE 297 Query: 300 SNKNVF 305 + Sbjct: 298 GADTII 303 >gi|254671436|emb|CBA08950.1| Porphobilinogen deaminase [Neisseria meningitidis alpha153] Length = 311 Score = 364 bits (935), Expect = 9e-99, Method: Composition-based stats. Identities = 102/306 (33%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPKGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 179 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 ARELIG 304 >gi|224499785|ref|ZP_03668134.1| porphobilinogen deaminase [Listeria monocytogenes Finland 1988] Length = 309 Score = 364 bits (935), Expect = 9e-99, Method: Composition-based stats. Identities = 115/306 (37%), Positives = 167/306 (54%), Gaps = 7/306 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L Sbjct: 60 LFVSEVEQALSDEAIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNQVNSLDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 120 QGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL + Sbjct: 180 ENTTLKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKK 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ IAGFA + F G+V +DG I E + G + IG A+ + Sbjct: 240 LNGGCEIPIAGFATRANEVVQFKGLVGNADGSIILESEQVG--ANPSEIGNKVAEDLLSE 297 Query: 300 SNKNVF 305 + Sbjct: 298 GADTII 303 >gi|224476761|ref|YP_002634367.1| porphobilinogen deaminase [Staphylococcus carnosus subsp. carnosus TM300] gi|254800259|sp|B9DNE1|HEM3_STACT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|222421368|emb|CAL28182.1| porphobilinogen deaminase [Staphylococcus carnosus subsp. carnosus TM300] Length = 308 Score = 364 bits (935), Expect = 9e-99, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 176/305 (57%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L V P +I I + TKGDRI ++ L+++GGKGL Sbjct: 2 RKLVVGSRRSKLALTQSRQFIERLKKVE--PDLDIEIKEIVTKGDRIVDKQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+++L EID A+HS KD+P++L GL + RE D FIS L DL Sbjct: 60 FVKEIQQELFDHEIDMAIHSLKDVPSELPDGLTLGCIPDREIPLDAFISKNHVQLADLPD 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 S++GTSSLRR A +L ++ + RG I+TRL+KL AI+LA AG++R+ + Sbjct: 120 GSIVGTSSLRRGAQILAKYPNLEIKWIRGNIDTRLSKLETEDYDAIILAAAGLRRMGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ E L+ E P+ GQGA+ IE ++ + +L+ +++++ + V ER FL E++G Sbjct: 180 DIVTEYLDPELLVPAIGQGALGIECRSDDTELLDLLSKVHNQEVAECVTAERTFLKEMNG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ I G+A L F G++++ DGK E + GN D + +G++ + ++ Sbjct: 240 SCQVPIGGYATIDDNGRLTFTGLIMSPDGKQRFEQTATGN--DPVELGKEVSDILKEQGA 297 Query: 302 KNVFN 306 K + + Sbjct: 298 KEIID 302 >gi|325135871|gb|EGC58483.1| porphobilinogen deaminase [Neisseria meningitidis M0579] gi|325207582|gb|ADZ03034.1| porphobilinogen deaminase [Neisseria meningitidis NZ-05/33] Length = 311 Score = 364 bits (935), Expect = 9e-99, Method: Composition-based stats. Identities = 103/306 (33%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 ARELIG 304 >gi|319651737|ref|ZP_08005863.1| porphobilinogen deaminase [Bacillus sp. 2_A_57_CT2] gi|317396556|gb|EFV77268.1| porphobilinogen deaminase [Bacillus sp. 2_A_57_CT2] Length = 311 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 166/305 (54%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL S L + P + + TKGD+I + TL+++GGKGL Sbjct: 2 RKIIVGSRRSKLALTQTNWVISQLKSI--DPSFEFEVKEIVTKGDKILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ ++ EID AVHS KDMP L GL I + RED RD IS L DL Sbjct: 60 FVKEIEQAMLDEEIDMAVHSMKDMPAVLPAGLTIGSIPEREDHRDALISKGHIKLNDLRE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 S++GTSSLRR A LL R D+ + RG I+TRL+KL + AI+LA AG+ R+ Sbjct: 120 GSIVGTSSLRRGAQLLAQRPDLEIKWIRGNIDTRLSKLETEEYDAIILAAAGLSRMGWAA 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L E P+ GQGA+ IE ++ + + L+ +T +V ERAFL +++G Sbjct: 180 DVVTEFLEPEVCVPAVGQGALSIECRESDKELRALLDKFTCSETNQTVRAERAFLHKMEG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAGFA + G+V + DGK+ ++ + G+ D +G A + Sbjct: 240 GCQVPIAGFATINETGEMELTGLVGSPDGKVIYKETLTGS--DPEELGVKMADMLTEQGA 297 Query: 302 KNVFN 306 K + + Sbjct: 298 KELID 302 >gi|114321817|ref|YP_743500.1| hydroxymethylbilane synthase [Alkalilimnicola ehrlichii MLHE-1] gi|122310751|sp|Q0A577|HEM3_ALHEH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|114228211|gb|ABI58010.1| hydroxymethylbilane synthase [Alkalilimnicola ehrlichii MLHE-1] Length = 308 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 160/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A + L H P + ++P+ T+GDRI ++ L+ IGG Sbjct: 1 MPQDKLRIATRRSPLAMWQAEHVAAELRRHH--PGLEVELVPMVTRGDRILDQALSRIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ + G D AVHS KD+P ++ G + L R + D F+S+ + L D Sbjct: 59 KGLFIKELEQGMEEGRADLAVHSMKDVPWRMPDGFALPVILERHEPTDAFVSNHYRRLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +GT+SLRR+ R D+ V RG + TRL KL+ + AI+LA +G+ RL Sbjct: 119 LPEGGHLGTASLRRQCQAKARRPDLRVSTLRGNVNTRLAKLDAGEFDAIILAASGLSRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I L E+ P+ GQGA+ IE + + QELV ++H T + ERA A L Sbjct: 179 FDERIARRLPPEESLPAVGQGALGIECLAEDRRVQELVAPLDHGPTHTLLKAERAMNARL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ IAG+A +G ++ G+V + DG+ G A +G + Sbjct: 239 QGSCQVPIAGYACYQGEEIWLRGLVGSPDGQEIVRGEVRGPIAQAAELGDRLGGELLERG 298 Query: 301 NKNVF 305 + Sbjct: 299 AARIL 303 >gi|254375261|ref|ZP_04990741.1| hydroxymethylbilane synthase [Francisella novicida GA99-3548] gi|151572979|gb|EDN38633.1| hydroxymethylbilane synthase [Francisella novicida GA99-3548] Length = 300 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 105/303 (34%), Positives = 167/303 (55%), Gaps = 5/303 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKAL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E +++ + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 59 FMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ + Sbjct: 119 GAIVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELVE 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C AI +A + + +V +SDGK + G+ D +G+ AQ + + Sbjct: 239 CHVAIGAYAELYNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAYK 296 Query: 304 VFN 306 + Sbjct: 297 ILE 299 >gi|116072875|ref|ZP_01470140.1| porphobilinogen deaminase [Synechococcus sp. BL107] gi|116064401|gb|EAU70162.1| porphobilinogen deaminase [Synechococcus sp. BL107] Length = 317 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 104/308 (33%), Positives = 155/308 (50%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLTITVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117 KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + H + Sbjct: 59 KGLFTKELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVLHAKNKHLN 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L +V+GTSSLRR A L + D RG + TRL KL++ ++LA AG+ Sbjct: 119 LATLPEGAVVGTSSLRRLAQLRHHYPHLEFKDVRGNVITRLEKLDSGAYDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I + + + + GQGA+ IE N P+ +++KV+ H T ERAFL Sbjct: 179 RLGFADRIDQSIPGDISLHAVGQGALGIECVENKPEVMDIIKVLEHGPTSQRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I +G L G+V + DGK +G D +IG A ++ Sbjct: 239 RELEGGCQVPIGVNTRFEGDQLILTGMVASLDGKRLIREKASGPSTDPESIGLALATTLK 298 Query: 298 FISNKNVF 305 + + Sbjct: 299 GLGAGEIL 306 >gi|323451650|gb|EGB07526.1| hypothetical protein AURANDRAFT_27306 [Aureococcus anophagefferens] Length = 333 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 132/310 (42%), Positives = 189/310 (60%), Gaps = 3/310 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIP---PHNIVIIPLSTKGDRITNRTLTE 57 +E P RIGTR SPLALA A+ TR LM I + + T+GD I ++ L+E Sbjct: 15 LEATPLRIGTRGSPLALAQAYMTRELLMKNFPEELGGEGAIQLCIMKTQGDMILDKALSE 74 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 IGGKGLFT+E++ L+ E+D VHS KD+PT L + L RED RDVFIS TA+S Sbjct: 75 IGGKGLFTKELDVALLGDEVDICVHSMKDVPTWLPAKTVLPCMLEREDTRDVFISPTAKS 134 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 LKDL SVIG++SLRR++ +L + ++FRG ++TRL KL+ A LLAYAG+K Sbjct: 135 LKDLKDGSVIGSASLRRQSQILAINPTLKCVNFRGNVQTRLRKLDEGVVDATLLAYAGLK 194 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + +L ++ P+ QGAI I+ ++ +A + + +NHE+T+ V+CERAFL Sbjct: 195 RMDMADEVTAVLEWDEMLPAVAQGAIGIQCRDDDARALKYIAALNHEETFTCVSCERAFL 254 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 A LDG+CK+ IAG A L F G+V + DG+ + ++ G DA IGR+A + I+ Sbjct: 255 AALDGNCKTPIAGQARIVDGELLFDGLVSSLDGQQMYRATKTGAPADAEKIGREAGEGIK 314 Query: 298 FISNKNVFNF 307 + F + Sbjct: 315 AEAGIEFFEW 324 >gi|221640136|ref|YP_002526398.1| porphobilinogen deaminase [Rhodobacter sphaeroides KD131] gi|221160917|gb|ACM01897.1| Porphobilinogen deaminase [Rhodobacter sphaeroides KD131] Length = 310 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 133/303 (43%), Positives = 183/303 (60%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGLF Sbjct: 7 PLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGLF 66 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE+ L+SG ID AVHS KDMPT +GL + YLPRED RD FI+ L DL Sbjct: 67 TREIEEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFAEGGLADLPQG 126 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK +V Sbjct: 127 ATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMNEV 186 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + E+ + QGAI IE ++P+AQE++ I+ T + ER+FL +LDGSC Sbjct: 187 PRVPIEPEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVPTGHRLAAERSFLLKLDGSC 246 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A +G L+ G +L DG G DA +G + A + + + Sbjct: 247 ETPIAGLAILEGDQLWLRGEILRPDGSESISGEIRGAIADAAALGSELASELLGRAPADF 306 Query: 305 FNF 307 F++ Sbjct: 307 FSW 309 >gi|81299776|ref|YP_399984.1| porphobilinogen deaminase [Synechococcus elongatus PCC 7942] gi|161621822|ref|YP_171285.2| porphobilinogen deaminase [Synechococcus elongatus PCC 6301] gi|123755408|sp|Q31PM2|HEM3_SYNE7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|81168657|gb|ABB56997.1| hydroxymethylbilane synthase [Synechococcus elongatus PCC 7942] Length = 320 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 108/306 (35%), Positives = 159/306 (51%), Gaps = 5/306 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P RIG+R S LAL + L ++ P + +ST+GD I + L +IG KGL Sbjct: 7 RPIRIGSRKSQLALVQTHWVQGELQRLY--PDRQFDVQTMSTQGDIILDVALAKIGDKGL 64 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKD 120 FT+E+E +++GE+D AVHS KD+PT+L +GL + RED D + H L+ Sbjct: 65 FTKELEVAMLAGEVDFAVHSLKDLPTRLPEGLILGCVTEREDPADALVVHDRFKDHQLET 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSSLRR A L + D RG + TRL KL+ + A++LA AG++RL Sbjct: 125 LPEGTVIGTSSLRRLAQLRHHYPHLQFKDVRGNLNTRLAKLDAGEYDALILAAAGLQRLS 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ + GQGA+ IE +P+ EL+K + HE T ERAFL EL Sbjct: 185 MADRIHQLIPAAVSLHAVGQGALGIECRAEDPEILELLKALEHEPTSQRCLAERAFLREL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I TL G+V + DG+ +G D +G A ++ Sbjct: 245 EGGCQVPIGVNTAIADGTLTLTGMVASLDGQRLLRDQVSGPTSDPEALGLALAAQLKAQG 304 Query: 301 NKNVFN 306 K + + Sbjct: 305 AKEILD 310 >gi|240112249|ref|ZP_04726739.1| porphobilinogen deaminase [Neisseria gonorrhoeae MS11] gi|268598310|ref|ZP_06132477.1| porphobilinogen deaminase [Neisseria gonorrhoeae MS11] gi|268582441|gb|EEZ47117.1| porphobilinogen deaminase [Neisseria gonorrhoeae MS11] Length = 311 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 106/306 (34%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG I + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKLADDG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 AQELIG 304 >gi|16800659|ref|NP_470927.1| porphobilinogen deaminase [Listeria innocua Clip11262] gi|23821696|sp|Q92BF8|HEM3_LISIN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|16414078|emb|CAC96822.1| hemC [Listeria innocua Clip11262] gi|313618766|gb|EFR90670.1| porphobilinogen deaminase [Listeria innocua FSL S4-378] Length = 309 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 117/306 (38%), Positives = 166/306 (54%), Gaps = 7/306 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSNWVIKKLKENY--PEIDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L ID AVHS KD+P+ L GL I A RE D F+ + +L DL Sbjct: 60 LFVSEVEQALSDEVIDFAVHSMKDVPSSLKDGLVIGAIPKRESPLDCFVFNEVSTLDDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR A LL+ R D V RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 120 KGAVIGTSSLRRAAQLLKHRPDFVVKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E ++ E P+ GQGA+ IE + + +++ I+HE+T V ER FL + Sbjct: 180 ENTSLKLEDISPELCLPAVGQGALAIECRETDLQICDMLASIHHEETGICVEAERVFLKK 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ IAGFA G +++F G+V +DG I E R G IG A+ + Sbjct: 240 LNGGCEIPIAGFATKTGDSVHFKGLVGNADGSIILESERTG--ASPAEIGNQVAEELLSE 297 Query: 300 SNKNVF 305 + Sbjct: 298 GADTII 303 >gi|251798413|ref|YP_003013144.1| porphobilinogen deaminase [Paenibacillus sp. JDR-2] gi|247546039|gb|ACT03058.1| porphobilinogen deaminase [Paenibacillus sp. JDR-2] Length = 323 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 110/312 (35%), Positives = 162/312 (51%), Gaps = 12/312 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDV--HKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +GTR S LAL + L + ++ I + TKGDRI + TL+++GGK Sbjct: 9 RTIVVGTRQSALALTQTGQVIDELKRISEKHGFDYHFEIRKIVTKGDRILDVTLSKVGGK 68 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +EIE+ L+ GEID AVHS KDMP +L +GL A R D RD I SL DL Sbjct: 69 GLFVKEIEQALLDGEIDMAVHSMKDMPYELPEGLMNGATPRRVDPRDCLIMKQGSSLDDL 128 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSSLRR + L R D+ + RG I++R+ KL A++LA AG+ R+ Sbjct: 129 PAGARVGTSSLRRSSQLKNIRPDLKLDSIRGNIDSRIRKLETEGFDAVVLAAAGLSRMGW 188 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I + ++ P+ GQGA+ IE + +EL+ ++N +T SV ER+FL L+ Sbjct: 189 QDRISAFIPVDLSIPAVGQGALGIECRTADAGVRELLNLLNDTETSLSVRAERSFLGALN 248 Query: 242 GSCKSAIAGFAYC--------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 G C+ I FA + L G+V + DG++ + R G D +GRD A Sbjct: 249 GGCQVPIGAFAVVHKKSEDSFDNAELELTGMVGSPDGEVMLKEIRKGT--DPEQLGRDVA 306 Query: 294 QYIRFISNKNVF 305 + + Sbjct: 307 AALSARGADRIL 318 >gi|255634492|gb|ACU17610.1| unknown [Glycine max] Length = 350 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 137/306 (44%), Positives = 189/306 (61%), Gaps = 6/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 +IGTR SPLALA A+ETR LM H I I+ + T GD+I ++ L +IGGKGL Sbjct: 43 LKIGTRGSPLALAQAYETRDKLMASHPELAEEGAIQIVIIKTTGDKILSQPLADIGGKGL 102 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+G+ D AVHS KD+PT L + LPRED+RD FIS +A SL DL Sbjct: 103 FTKEIDEALINGDSDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLSAASLADLPS 162 Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SV+GT+SLRRK+ +L ++V + FRG ++TRL KL+ A LLA AG+KRL Sbjct: 163 GSVVGTASLRRKSQILHRYPSLNVEENFRGNVQTRLRKLSEGIVQATLLALAGLKRLNMT 222 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + IL+I+D P+ QGAI I N+ K E + +NHE+T +V+CERAFL +L+G Sbjct: 223 ENVSSILSIDDMLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAVSCERAFLEKLEG 282 Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFI 299 SC + IAG+A + F G+V + DG E SR G+ D I +G+DA + + Sbjct: 283 SCHTPIAGYASRNEDGNCLFRGLVASPDGTRVLETSRIGSYAFEDMIKMGKDAGEELLSR 342 Query: 300 SNKNVF 305 + F Sbjct: 343 AGPGFF 348 >gi|59800604|ref|YP_207316.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA 1090] gi|240013461|ref|ZP_04720374.1| porphobilinogen deaminase [Neisseria gonorrhoeae DGI18] gi|240117279|ref|ZP_04731341.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID1] gi|240120532|ref|ZP_04733494.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID24-1] gi|254493056|ref|ZP_05106227.1| porphobilinogen deaminase [Neisseria gonorrhoeae 1291] gi|260441191|ref|ZP_05795007.1| porphobilinogen deaminase [Neisseria gonorrhoeae DGI2] gi|268602974|ref|ZP_06137141.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID1] gi|59717499|gb|AAW88904.1| putative porphobilinogen deaminase [Neisseria gonorrhoeae FA 1090] gi|226512096|gb|EEH61441.1| porphobilinogen deaminase [Neisseria gonorrhoeae 1291] gi|268587105|gb|EEZ51781.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID1] Length = 311 Score = 363 bits (933), Expect = 1e-98, Method: Composition-based stats. Identities = 106/306 (34%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG I + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKLADDG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 AQELIG 304 >gi|115314083|ref|YP_762806.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica OSU18] gi|122325870|sp|Q0BP15|HEM3_FRATO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|115128982|gb|ABI82169.1| hydroxymethylbilane synthase [Francisella tularensis subsp. holarctica OSU18] Length = 300 Score = 363 bits (933), Expect = 1e-98, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 167/303 (55%), Gaps = 5/303 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKAL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 59 FMKELEVAILSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ + Sbjct: 119 GAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELVE 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C AI +A + + +V +SDGK + G+ D +G+ AQ + + Sbjct: 239 CHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAYK 296 Query: 304 VFN 306 + Sbjct: 297 ILE 299 >gi|16803596|ref|NP_465081.1| porphobilinogen deaminase [Listeria monocytogenes EGD-e] gi|47096721|ref|ZP_00234306.1| porphobilinogen deaminase [Listeria monocytogenes str. 1/2a F6854] gi|224501504|ref|ZP_03669811.1| porphobilinogen deaminase [Listeria monocytogenes FSL R2-561] gi|254831957|ref|ZP_05236612.1| porphobilinogen deaminase [Listeria monocytogenes 10403S] gi|254898277|ref|ZP_05258201.1| porphobilinogen deaminase [Listeria monocytogenes J0161] gi|254912230|ref|ZP_05262242.1| porphobilinogen deaminase [Listeria monocytogenes J2818] gi|254936558|ref|ZP_05268255.1| porphobilinogen deaminase [Listeria monocytogenes F6900] gi|284801947|ref|YP_003413812.1| porphobilinogen deaminase [Listeria monocytogenes 08-5578] gi|284995089|ref|YP_003416857.1| porphobilinogen deaminase [Listeria monocytogenes 08-5923] gi|23821694|sp|Q8Y6X5|HEM3_LISMO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|16410985|emb|CAC99634.1| hemC [Listeria monocytogenes EGD-e] gi|47014905|gb|EAL05853.1| porphobilinogen deaminase [Listeria monocytogenes str. 1/2a F6854] gi|258609152|gb|EEW21760.1| porphobilinogen deaminase [Listeria monocytogenes F6900] gi|284057509|gb|ADB68450.1| porphobilinogen deaminase [Listeria monocytogenes 08-5578] gi|284060556|gb|ADB71495.1| porphobilinogen deaminase [Listeria monocytogenes 08-5923] gi|293590205|gb|EFF98539.1| porphobilinogen deaminase [Listeria monocytogenes J2818] Length = 309 Score = 363 bits (933), Expect = 1e-98, Method: Composition-based stats. Identities = 115/306 (37%), Positives = 167/306 (54%), Gaps = 7/306 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L Sbjct: 60 LFVSEVEQALSDEAIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNQVNSLDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 120 QGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL + Sbjct: 180 ENTTLKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKK 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ IAGFA + F G+V +DG I E + G + IG A+ + Sbjct: 240 LNGGCEIPIAGFATRANEFVQFKGLVGNADGSIILESEQVG--ANPSEIGNKVAEDLLSE 297 Query: 300 SNKNVF 305 + Sbjct: 298 GADTII 303 >gi|152976881|ref|YP_001376398.1| porphobilinogen deaminase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189042874|sp|A7GTE5|HEM3_BACCN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|152025633|gb|ABS23403.1| porphobilinogen deaminase [Bacillus cytotoxicus NVH 391-98] Length = 309 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 114/304 (37%), Positives = 166/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLQALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPAGLTIGCIPKRVDPRDAFISKNGKSFKELAK 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 + +GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG+KR+ + Sbjct: 120 GATLGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLQEENYDAIILATAGLKRMGWDN 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G Sbjct: 180 DVITEHLDESLCVPAVGQGALAIECREDDKDLLQLLAHMNDAATERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + + +V ++DG + + + G + +G +AA+ + Sbjct: 240 GCQVPIAGYATLQENGKIKLHALVGSTDGSVLLKETVVGT--NPETVGLEAAERLIHQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|134302637|ref|YP_001122606.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis WY96-3418] gi|158513860|sp|A4IZY4|HEM3_FRATW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|134050414|gb|ABO47485.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis WY96-3418] Length = 300 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 167/303 (55%), Gaps = 5/303 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L Sbjct: 2 KQITIASRESKLALWQTNFIKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKAL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 59 FMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ + Sbjct: 119 GAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELVE 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C AI +A + + +V +SDGK + G+ D +G+ AQ + + Sbjct: 239 CHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAYK 296 Query: 304 VFN 306 + Sbjct: 297 ILE 299 >gi|311105076|ref|YP_003977929.1| porphobilinogen deaminase [Achromobacter xylosoxidans A8] gi|310759765|gb|ADP15214.1| porphobilinogen deaminase [Achromobacter xylosoxidans A8] Length = 315 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 113/300 (37%), Positives = 167/300 (55%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A R L ++ P + ++ L+T+GD+I +RTL+++GGKGLF Sbjct: 7 LVIATRASRLALWQAEHVRDRLRTLY--PACAVELLTLTTRGDQILDRTLSKVGGKGLFV 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P L ++ A L R D RD F+S+T +L DL + Sbjct: 65 KELENALLDGRADLAVHSLKDVPVDLQAPFELCAVLDRADPRDAFVSNTHDTLADLPAGA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR++ + ++ V RG ++TRL KL+ + AI+LA AG++RL I Sbjct: 125 VVGTSSLRRESQIRARYPELVVKPLRGNLDTRLGKLDKGEYDAIVLAAAGLERLGLGARI 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + +L ED P+ GQGA+ IE + + + + DT V ERA +L GSC+ Sbjct: 185 RSLLEPEDSLPAAGQGALGIEIRDDRDDMRAWLAPLVSADTTSCVVAERAVSRKLGGSCQ 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A +A G TL +V + DG SR+G DA IG AAQ + +++ Sbjct: 245 VPLAAYAEIAGGTLSLRALVASPDGVRMVHASRSGPVADAQAIGEAAAQALLDAGAQDIL 304 >gi|154686951|ref|YP_001422112.1| porphobilinogen deaminase [Bacillus amyloliquefaciens FZB42] gi|166201493|sp|A7Z7A5|HEM3_BACA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|154352802|gb|ABS74881.1| HemC [Bacillus amyloliquefaciens FZB42] Length = 313 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 168/305 (55%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + ++G+R S LA+ + L +++ P +N I + TKGDRI + TL+++GGKGL Sbjct: 2 RTIKVGSRRSKLAMTQTKWVINKLKELN--PSYNFEIREIVTKGDRILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+ EID AVHS KDMP L +GL I RED RD IS Q L + Sbjct: 60 FVKEIEQALLHQEIDMAVHSMKDMPAVLPEGLVIGCIPKREDPRDALISKGHQKLDGIKE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +IGTSSLRR A +L R D+++ RG I+TRL KL AI+LA AG+ R+ + Sbjct: 120 GGIIGTSSLRRSAQILAERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L + P+ GQGA+ IE ++ + +L E T +V ERAFL ++G Sbjct: 180 DVVSEFLEPDRCLPAVGQGALAIECRESDEELLKLFAQFTDEYTQRTVAAERAFLHAMEG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + G+V + DGK ++ + G+ D IG+ A + Sbjct: 240 GCQVPIAGYASVNDRDEVELVGLVASPDGKTIYKETAAGH--DPEEIGKRCAAMMSEKGA 297 Query: 302 KNVFN 306 K + + Sbjct: 298 KALID 302 >gi|148238945|ref|YP_001224332.1| porphobilinogen deaminase [Synechococcus sp. WH 7803] gi|147847484|emb|CAK23035.1| Porphobilinogen deaminase [Synechococcus sp. WH 7803] Length = 319 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 103/309 (33%), Positives = 159/309 (51%), Gaps = 5/309 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 3 MALEHLRIASRRSQLAMVQTNWVKAELEKAH--PGLAISVEAMATQGDKILDVALAKIGD 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117 KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + ++ + Sbjct: 61 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNSKNAEHT 120 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L SV+GTSSLRR A L + D RG + TRL KL+ + ++LA AG+ Sbjct: 121 LETLPEGSVVGTSSLRRLAQLRHHFPHLQFKDVRGNVITRLEKLDAGQYDCLILAAAGLS 180 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +I+ + GQGA+ IE + P+ ++++V+ H T ERAFL Sbjct: 181 RLGFGDRIHQIIPGHISLHAVGQGALGIECVCDRPEVLKIIQVLEHAPTAGRCLAERAFL 240 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + G+ L G+V + DG+ R G+ D IGR A ++ Sbjct: 241 RELEGGCQVPIGVNSRIDGTELILTGMVASLDGQRLIRDERRGSLTDPEAIGRALAADLK 300 Query: 298 FISNKNVFN 306 + Sbjct: 301 SRGAGEILQ 309 >gi|56707415|ref|YP_169311.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis SCHU S4] gi|110669886|ref|YP_666443.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis FSC198] gi|224456493|ref|ZP_03664966.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis MA00-2987] gi|254370888|ref|ZP_04986893.1| hydroxymethylbilane synthase [Francisella tularensis subsp. tularensis FSC033] gi|254874253|ref|ZP_05246963.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis MA00-2987] gi|61213244|sp|Q5NI31|HEM3_FRATT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123169616|sp|Q14JI3|HEM3_FRAT1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|56603907|emb|CAG44892.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella tularensis subsp. tularensis SCHU S4] gi|110320219|emb|CAL08275.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella tularensis subsp. tularensis FSC198] gi|151569131|gb|EDN34785.1| hydroxymethylbilane synthase [Francisella tularensis subsp. tularensis FSC033] gi|254840252|gb|EET18688.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis MA00-2987] gi|282158558|gb|ADA77949.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella tularensis subsp. tularensis NE061598] Length = 300 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 167/303 (55%), Gaps = 5/303 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQLELNIP---CEISTMKTQGDIILDQPLNKIGGKAL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 59 FMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ + Sbjct: 119 GAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELVE 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C AI +A + + +V +SDGK + G+ D +G+ AQ + + Sbjct: 239 CHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAYK 296 Query: 304 VFN 306 + Sbjct: 297 ILE 299 >gi|239905446|ref|YP_002952185.1| porphobilinogen deaminase [Desulfovibrio magneticus RS-1] gi|239795310|dbj|BAH74299.1| porphobilinogen deaminase [Desulfovibrio magneticus RS-1] Length = 311 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 106/304 (34%), Positives = 162/304 (53%), Gaps = 2/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++ I TR S LAL A L H P + ++P+ TKGD I + L ++GGKG Sbjct: 2 REKLVIATRGSKLALWQANHVADRLRQTH--PGLAVDLLPIKTKGDIILDVPLAKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L+ G D AVHS KD+P + GL + RED D +S SL L Sbjct: 60 LFVKEIEEALLDGRADLAVHSMKDVPAEQPAGLVVGIVPEREDPCDRLLSVAYDSLAALP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRRKA LL R D++++D RG ++TR+ KL + + AI++A AG+ RL+ Sbjct: 120 QGATVGTSSLRRKAQLLALRPDLAIVDLRGNLDTRVKKLLDGQFDAIIVAAAGLNRLELS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 L +F P+ QGA+ IE +++P+ ++ +H ++ D+V ER FL L+G Sbjct: 180 APKAVRLGPPEFLPAAAQGALGIEYRLDDPETAAMLAFFDHPESHDAVAAERGFLGHLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IA A G ++ G+V + + +G R A +G A+ + K Sbjct: 240 GCQVPIAAHAVIDGDMIHLEGLVADPETGQTFREAASGPRSQATALGVAVAEAVLARGAK 299 Query: 303 NVFN 306 V + Sbjct: 300 AVLD 303 >gi|77464252|ref|YP_353756.1| porphobilinogen deaminase [Rhodobacter sphaeroides 2.4.1] gi|77388670|gb|ABA79855.1| Porphobilinogen deaminase [Rhodobacter sphaeroides 2.4.1] Length = 314 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 133/303 (43%), Positives = 183/303 (60%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGLF Sbjct: 11 PLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE+ L+SG ID AVHS KDMPT +GL + YLPRED RD FI+ L DL Sbjct: 71 TREIEEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFAEGGLADLPQG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK +V Sbjct: 131 ATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMNEV 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + E+ + QGAI IE ++P+AQE++ I+ T + ER+FL +LDGSC Sbjct: 191 PRVPIESEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVPTGHRLAAERSFLLKLDGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A +G L+ G +L DG G DA +G + A + + + Sbjct: 251 ETPIAGLAILEGDQLWLRGEILRPDGSESISGEIRGAIADAAALGSELASELLGRAPADF 310 Query: 305 FNF 307 F++ Sbjct: 311 FSW 313 >gi|161617053|ref|YP_001591018.1| hypothetical protein SPAB_04886 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161366417|gb|ABX70185.1| hypothetical protein SPAB_04886 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 286 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 98/272 (36%), Positives = 145/272 (53%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P Sbjct: 5 PGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVHSMKDVPVAFPD 64 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL DL S++GTSSLRR+ L R D+ + RG Sbjct: 65 GLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL KL+N AI+LA AG+KRL E I+ L + P+ GQGA+ IE +++ + Sbjct: 125 VGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTALPPDVSLPAVGQGAVGIECRLDDAR 184 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 Q L+ +NH T V ERA L+G C+ I +A ++ +V A DG + Sbjct: 185 TQALLAPLNHSQTALRVTAERAMNTRLEGGCQVPIGSYAEIINGEIWLRALVGAPDGSVM 244 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 R G+ A +G A+ + + + Sbjct: 245 VRGERRGSPEQAEQMGISLAEELLENGARAIL 276 >gi|319779685|ref|YP_004130598.1| Porphobilinogen deaminase [Taylorella equigenitalis MCE9] gi|317109709|gb|ADU92455.1| Porphobilinogen deaminase [Taylorella equigenitalis MCE9] Length = 313 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 104/303 (34%), Positives = 167/303 (55%), Gaps = 2/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RI TR S LA+ A + L + P N+ + ++TKGD+I ++TL++IGGKGL Sbjct: 6 KNLRIATRESRLAVWQAEFVQKKLKSI--FPHLNVELHKMTTKGDQILDKTLSKIGGKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+SG D AVHS KD+P +L +I+ L RE+ D F+S+ ++ KDL Sbjct: 64 FIKELESSLLSGVTDLAVHSLKDVPVELNDEFEIACILERENPMDAFVSNEYKTFKDLPE 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR++ + + V RG ++TRL KL++ + AI+LA AG+KRL Sbjct: 124 GAIVGTSSLRRESQIRAKFPHLVVKPLRGNLDTRLKKLDDGQYSAIILAAAGLKRLNMMD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 IK ++I+D P+ GQGA+ IE + +E++ ++HE+T+ V+ ER L GS Sbjct: 184 RIKSFVSIDDSLPAVGQGALAIEILKDKFALKEMLSYLHHEETFKCVSAERIVSQYLGGS 243 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ +A A +V + DG G+ + ++ A + + Sbjct: 244 CQVPLAAHACVINDLFQVRALVASPDGSRILRAESFGSPDEYESVATTVALNLIDQGARE 303 Query: 304 VFN 306 + N Sbjct: 304 IIN 306 >gi|189346422|ref|YP_001942951.1| porphobilinogen deaminase [Chlorobium limicola DSM 245] gi|238058917|sp|B3EIN1|HEM3_CHLL2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189340569|gb|ACD89972.1| porphobilinogen deaminase [Chlorobium limicola DSM 245] Length = 313 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 120/307 (39%), Positives = 170/307 (55%), Gaps = 6/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG G Sbjct: 2 KKQLIIGTRSSPLALWQAEFTKAEL--SRHFPELDITLKLVKTTGDVLLDSPLSKIGDMG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT++IEK LI+ EID AVHS KD+PT +GL I+++ RED RDV IS L DL Sbjct: 60 LFTKDIEKHLIAKEIDLAVHSLKDVPTSTPEGLIITSFTEREDTRDVIISKGGAKLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 L++ + TSSLRR + L R D + D RG + TR K + + A++LAYAG+ RL Sbjct: 120 LNAKVATSSLRRMSQLKSLRPDFEICDIRGNLNTRFKKFDEGEFDAMMLAYAGVFRLNFS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EIL E P+ GQGA+ IET V++ + +E+V+++NH +T ERA L L G Sbjct: 180 DRISEILPHEIMLPAVGQGALGIETRVDDEQTREIVRILNHSNTEYCCKAERALLRHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFH--EVSRNG--NRCDAINIGRDAAQYIRF 298 C+ I +A K TL V + DG + E++R+G + A G A+ + Sbjct: 240 GCQIPIGAYASFKNGTLKLLAFVGSVDGTVGINNEITRSGLTSPDQAEEAGIALAEELLK 299 Query: 299 ISNKNVF 305 + Sbjct: 300 QGADKIL 306 >gi|268594132|ref|ZP_06128299.1| porphobilinogen deaminase [Neisseria gonorrhoeae 35/02] gi|268596184|ref|ZP_06130351.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA19] gi|268547521|gb|EEZ42939.1| porphobilinogen deaminase [Neisseria gonorrhoeae 35/02] gi|268549972|gb|EEZ44991.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA19] Length = 313 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 106/306 (34%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 3 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 61 KGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 121 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 181 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG I + A +GR A+ + Sbjct: 241 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKLADDG 300 Query: 301 NKNVFN 306 + + Sbjct: 301 AQELIG 306 >gi|121634334|ref|YP_974579.1| porphobilinogen deaminase [Neisseria meningitidis FAM18] gi|120866040|emb|CAM09778.1| putative porphobilinogen deaminase [Neisseria meningitidis FAM18] gi|325131787|gb|EGC54488.1| porphobilinogen deaminase [Neisseria meningitidis M6190] gi|325137677|gb|EGC60254.1| porphobilinogen deaminase [Neisseria meningitidis ES14902] Length = 311 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 104/306 (33%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLQADAQAPAEYADALGRAVAKKLADDG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 ARELIG 304 >gi|325141763|gb|EGC64215.1| porphobilinogen deaminase [Neisseria meningitidis 961-5945] gi|325197751|gb|ADY93207.1| porphobilinogen deaminase [Neisseria meningitidis G2136] Length = 311 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 104/306 (33%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 ARELIG 304 >gi|241667490|ref|ZP_04755068.1| porphobilinogen deaminase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876036|ref|ZP_05248746.1| porphobilinogen deaminase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842057|gb|EET20471.1| porphobilinogen deaminase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 300 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 102/303 (33%), Positives = 168/303 (55%), Gaps = 5/303 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LAL + + I + T+GD I ++ L +IGGK L Sbjct: 2 KQIVIASRESKLALWQTNYVKDRIQQEL---NIRCQINTMKTQGDIILDKPLNKIGGKAL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E +++ + D AVHS KD+P +L +G +++++PRED RD F+S+ S+ DL Sbjct: 59 FMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLASFMPREDPRDAFVSNKYSSIDDLPR 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ + Sbjct: 119 GAIVGTSSLRRKAQLLHYRGDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELNE 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +E P+ GQG + IE + + + ++ +N D++ ERAF EL G Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALDKSSEILQKLQKLNCSDSFCVATAERAFNQELKGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C AI +A + + +V +SDGK + G+ + + +G+ AQ + + Sbjct: 239 CHVAIGAYAELHDNQITLTAMVASSDGKNILKRKLIGD--NPMRLGKLLAQEMIELGAYK 296 Query: 304 VFN 306 + Sbjct: 297 ILE 299 >gi|126653692|ref|ZP_01725611.1| porphobilinogen deaminase [Bacillus sp. B14905] gi|126589729|gb|EAZ83864.1| porphobilinogen deaminase [Bacillus sp. B14905] Length = 310 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 116/299 (38%), Positives = 164/299 (54%), Gaps = 5/299 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + L P + + TKGD+I + L+++GGKGL Sbjct: 2 RKIIVGSRRSKLALTQTNWFINELKAAGA--PFEFEVKEIVTKGDQILDVQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L EID AVHS KDMP L +GL I PRED RD FIS DL Sbjct: 60 FVKEIEQALYDKEIDFAVHSMKDMPAVLPEGLVIGCIPPREDARDAFISKGHVKFADLPA 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +V+GTSSLRR A LL R D+ + RG ++TRL KL + AI+LA AG+KRL E Sbjct: 120 GAVVGTSSLRRSAQLLTVRPDLEIKWIRGNVDTRLAKLETEEYDAIILAAAGLKRLGWSE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L++ED P+ QG++ IE ++ + + + + TW + ERAFLA +DG Sbjct: 180 DVVTEFLSVEDCLPAVAQGSLGIECRGDDTELLAELAKLTDQLTWQEAHAERAFLAAMDG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A G + G+V A D + ++ + G+ DA IG + A + Sbjct: 240 GCQVPIAGYATSNGDEITLTGLVAAPDASVVYKETVVGS--DAQKIGEELATILTKQGA 296 >gi|159486921|ref|XP_001701485.1| porphobilinogen deaminase [Chlamydomonas reinhardtii] gi|158271667|gb|EDO97482.1| porphobilinogen deaminase [Chlamydomonas reinhardtii] Length = 349 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 132/309 (42%), Positives = 188/309 (60%), Gaps = 5/309 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIG 59 K +IGTR SPLALA A+ TR L + I+ + T GD+I N+ L +IG Sbjct: 39 ATKTVKIGTRGSPLALAQAYMTRDLLKKSFPELSEEGALEIVIIKTTGDKILNQPLADIG 98 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLFT+EI+ L+SG+ID AVHS KD+PT L +G + LPRED+RDVFIS A+ L Sbjct: 99 GKGLFTKEIDDALLSGKIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDVFISPVAKDLS 158 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +++G++SLRR+A +L + V +FRG ++TRL KLN A LLA AG+KRL Sbjct: 159 ELPAGAIVGSASLRRQAQILAKYPHLKVENFRGNVQTRLRKLNEGACSATLLALAGLKRL 218 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I + L+I++ P+ QGAI I ++ ++ L+ +NHE+T +V CERAFL Sbjct: 219 DMTEHITKTLSIDEMLPAVSQGAIGIACRTDDGASRNLLAALNHEETRIAVVCERAFLTA 278 Query: 240 LDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYI 296 LDGSC++ IAG+A+ L+F G+V DGK SR DA+ G +A + + Sbjct: 279 LDGSCRTPIAGYAHKGADGMLHFSGLVATPDGKQIMRASRVVPFTEADAVKCGEEAGKEL 338 Query: 297 RFISNKNVF 305 + K +F Sbjct: 339 KANGPKELF 347 >gi|87123876|ref|ZP_01079726.1| Porphobilinogen deaminase [Synechococcus sp. RS9917] gi|86168445|gb|EAQ69702.1| Porphobilinogen deaminase [Synechococcus sp. RS9917] Length = 317 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 104/309 (33%), Positives = 153/309 (49%), Gaps = 5/309 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALEHLRIASRRSQLAMVQTNWVKAELEQAH--PGLPISVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117 KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + + Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNAKNADHK 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L +V+GTSSLRR A L + D RG + TRL KL+ ++LA AG+ Sbjct: 119 LETLPEGAVVGTSSLRRLAQLRHHYPHLEFKDVRGNVITRLEKLDAGDYDCLILAAAGLT 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +I+ + GQGA+ IE P EL+KV+ H T ERAFL Sbjct: 179 RLGFADRIHQIIPSHISLHAVGQGALGIECVEGQPDVLELIKVLEHSPTASRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + + L G+V + DGK R G A IG+ A ++ Sbjct: 239 RELEGGCQVPIGVNTRIEANELVLTGMVASLDGKRLIRDERRGTVDKAEAIGQLLAADLK 298 Query: 298 FISNKNVFN 306 ++ Sbjct: 299 SQGAGDILQ 307 >gi|313668981|ref|YP_004049265.1| porphobilinogen deaminase [Neisseria lactamica ST-640] gi|313006443|emb|CBN87906.1| putative porphobilinogen deaminase [Neisseria lactamica 020-06] Length = 326 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 106/306 (34%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 16 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 74 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNRYARLEE 133 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L +++ RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 134 MPKGAVVGTSSLRREAQLRARYPHLAIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 193 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 194 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 253 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG I + A +GR A+ + Sbjct: 254 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSIVLQADAQAPAEYADALGRAVAKKLADDG 313 Query: 301 NKNVFN 306 + + Sbjct: 314 ARELIG 319 >gi|332559141|ref|ZP_08413463.1| porphobilinogen deaminase [Rhodobacter sphaeroides WS8N] gi|332276853|gb|EGJ22168.1| porphobilinogen deaminase [Rhodobacter sphaeroides WS8N] Length = 310 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 133/303 (43%), Positives = 184/303 (60%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGLF Sbjct: 7 PLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGLF 66 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE+ L+SG ID AVHS KDMPT +GL + YLPRED RD FI+ L DL Sbjct: 67 TREIEEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFADGGLADLPQG 126 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK ++V Sbjct: 127 ATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMDEV 186 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + E+ + QGAI IE ++P+AQE++ I+ T + ER+FL +LDGSC Sbjct: 187 PRVPIEPEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVRTGHRLAAERSFLLKLDGSC 246 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A +G L+ G +L DG G DA +G + A + + + Sbjct: 247 ETPIAGLAILEGDQLWLRGEILRPDGSESISGEIRGAIADAAALGSELASELLGRAPADF 306 Query: 305 FNF 307 F++ Sbjct: 307 FSW 309 >gi|325202672|gb|ADY98126.1| porphobilinogen deaminase [Neisseria meningitidis M01-240149] Length = 311 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 103/306 (33%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPKGVVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 ARELIG 304 >gi|315303323|ref|ZP_07873952.1| porphobilinogen deaminase [Listeria ivanovii FSL F6-596] gi|313628303|gb|EFR96807.1| porphobilinogen deaminase [Listeria ivanovii FSL F6-596] Length = 309 Score = 362 bits (931), Expect = 2e-98, Method: Composition-based stats. Identities = 116/306 (37%), Positives = 170/306 (55%), Gaps = 7/306 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSGWVIARLKENY--PSIDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L G ID AVHS KD+P+ L +GL I A RE D F+ +T + KDL Sbjct: 60 LFVSEVEQALSDGLIDFAVHSMKDVPSSLKEGLTIGAIPKRESALDCFVFNTVATFKDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR A +LR R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 120 KGAVIGTSSLRRAAQILRKRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E + E P+ GQGA+ IE ++ + +++ I+HE+T V ER FL + Sbjct: 180 ENTTLKLEDIPPELCLPAVGQGALAIECRESDQQICDMLASIHHEETGACVEAERIFLKK 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ IAGFA T++F G+V SDG ++G + IG A+ + Sbjct: 240 LNGGCEIPIAGFATKTDGTVHFKGLVGNSDGTTILSAEQSGK--NPETIGNQVAESLLSE 297 Query: 300 SNKNVF 305 ++ Sbjct: 298 GAASII 303 >gi|169829410|ref|YP_001699568.1| porphobilinogen deaminase [Lysinibacillus sphaericus C3-41] gi|238058924|sp|B1HVD6|HEM3_LYSSC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|168993898|gb|ACA41438.1| Porphobilinogen deaminase [Lysinibacillus sphaericus C3-41] Length = 310 Score = 362 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 115/299 (38%), Positives = 165/299 (55%), Gaps = 5/299 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + L P + + TKGD+I + L+++GGKGL Sbjct: 2 RKIIVGSRRSKLALTQTNWFINELKAAGA--PFEFEVKEIVTKGDQILDVQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L EID AVHS KDMP L +GL I PRED RD FIS +L Sbjct: 60 FVKEIEQALYEKEIDFAVHSMKDMPAVLPEGLVIGCIPPREDARDAFISKGHVKFSELPA 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +V+GTSSLRR A LL R D+ + RG ++TRL KL + AI+LA AG+KRL E Sbjct: 120 GAVVGTSSLRRSAQLLTVRPDLEIKWIRGNVDTRLAKLETEEYDAIILAAAGLKRLGWSE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L++ED P+ QG++ IE ++ + + + + + TW + ERAFLA +DG Sbjct: 180 DVVTEFLSVEDCLPAVAQGSLGIECREDDTELLDELAKLTDQLTWQEAHAERAFLAAMDG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A G + G+V A D + ++ + G+ DA IG + A + Sbjct: 240 GCQVPIAGYATSNGEEITLTGLVAAPDASVVYKETVVGS--DAQKIGEELATILTKQGA 296 >gi|313893126|ref|ZP_07826703.1| hydroxymethylbilane synthase [Veillonella sp. oral taxon 158 str. F0412] gi|313442479|gb|EFR60894.1| hydroxymethylbilane synthase [Veillonella sp. oral taxon 158 str. F0412] Length = 305 Score = 362 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 104/277 (37%), Positives = 158/277 (57%), Gaps = 2/277 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + L ++ P + ++ +TKGDRI + L ++GGKGLFT Sbjct: 5 IRIGTRKSALALWQAEHISAELQRLY--PNITVELVHFNTKGDRILEKPLAQVGGKGLFT 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E+E+ + G+ID AVHS KDMPT+L +GL + A RE D +S ++L L + Sbjct: 63 AELEEAMHKGDIDIAVHSLKDMPTELPEGLTLGAISAREVPYDALVSPVYKTLDKLPQGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A LL R D+ V RG ++TRL+K+ K ++LA AG+KRL + I Sbjct: 123 RVGTSSLRRQAQLLHVRPDLKVEVIRGNVQTRLSKIETEKLDGVILAQAGLKRLGLDDQI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ ++ P+ GQGA+ IE ++ + E++ IN E T +V ER+FL +L+G C+ Sbjct: 183 TQVFKADEMIPAVGQGALAIECRADDTEMLEMLAPINDEATRYAVEGERSFLRQLNGGCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 + L ++ + DGK +E +G Sbjct: 243 VPMGVHGTIDKGQLTLKAMIASLDGKTVYEGEISGPA 279 >gi|254804423|ref|YP_003082644.1| Porphobilinogen deaminase [Neisseria meningitidis alpha14] gi|254667964|emb|CBA04229.1| Porphobilinogen deaminase [Neisseria meningitidis alpha14] Length = 311 Score = 362 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 104/306 (33%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLQADAQASAEYADALGRAVAKKLADDG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 ARELIG 304 >gi|212638453|ref|YP_002314973.1| porphobilinogen deaminase [Anoxybacillus flavithermus WK1] gi|212559933|gb|ACJ32988.1| Porphobilinogen deaminase (hydroxymethylbilane synthase) [Anoxybacillus flavithermus WK1] Length = 313 Score = 362 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 106/304 (34%), Positives = 159/304 (52%), Gaps = 5/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P + + TKGD+I + TL+++GGKGL Sbjct: 7 RKIIVGSRRSKLALTQTNWVIEQLKQLGA--PFEFEVKEIVTKGDQILHVTLSKVGGKGL 64 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ ++ GEID AVHS KDMP L GL I RED RDV IS + L Sbjct: 65 FVKEIEQAMLDGEIDFAVHSMKDMPAVLPDGLVIGCVPKREDHRDVLISKGHIPFEQLPS 124 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +++GTSSLRR A LL R D+ + RG I+TRL KL + AI+LA AG+ R+ + Sbjct: 125 GAIVGTSSLRRSAQLLAVRPDLQIQWIRGNIDTRLAKLQTDAYDAIILAAAGLHRMGWAK 184 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +VI + L + P+ GQGA+ IE N+ + + + + T + ERAFL ++G Sbjct: 185 EVITQYLPTDICVPAVGQGALAIECRENDAELLHWLNKLTDKQTERATRAERAFLQHIEG 244 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ +AG+AY + +V +G + G + +G +AA+ + K Sbjct: 245 GCQVPVAGYAYVDEDAIVLTALVATPNGTEVLKEVVKGT--EPEKVGTEAAKRLIERGAK 302 Query: 303 NVFN 306 + Sbjct: 303 QLIE 306 >gi|254828209|ref|ZP_05232896.1| porphobilinogen deaminase [Listeria monocytogenes FSL N3-165] gi|258600598|gb|EEW13923.1| porphobilinogen deaminase [Listeria monocytogenes FSL N3-165] Length = 309 Score = 362 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 116/306 (37%), Positives = 167/306 (54%), Gaps = 7/306 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L ID AVHS KD+P+ L KGL I A RE D F+ + SL +L Sbjct: 60 LFVSEVEQALSDEAIDFAVHSMKDVPSSLKKGLIIGAIPKRESPLDCFVFNQVNSLDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 120 QGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL + Sbjct: 180 ENTTLKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKK 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ IAGFA + F G+V +DG I E + G + IG A+ + Sbjct: 240 LNGGCEIPIAGFATRANEFVQFKGLVGNADGSIILESEQVG--ANPSEIGNKVAEDLLSE 297 Query: 300 SNKNVF 305 + Sbjct: 298 GADTII 303 >gi|313608617|gb|EFR84478.1| porphobilinogen deaminase [Listeria monocytogenes FSL F2-208] Length = 309 Score = 362 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 113/307 (36%), Positives = 166/307 (54%), Gaps = 7/307 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PAFDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + +L +L Sbjct: 60 LFVSEVEQALSDKTIDFAVHSMKDVPSSLKEGLVIGAIPKRESPLDCFVFNQMNALDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 120 HGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL + Sbjct: 180 ENTTLKLXXXXPELCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKK 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ IAGFA ++F G+V +DG I E + G + IG A+ + Sbjct: 240 LNGGCEIPIAGFATKANEAVHFKGLVGNADGSIILEAEQTG--ANPSEIGNKVAEDLLSK 297 Query: 300 SNKNVFN 306 + Sbjct: 298 GADTIIQ 304 >gi|196034473|ref|ZP_03101882.1| porphobilinogen deaminase [Bacillus cereus W] gi|228948178|ref|ZP_04110462.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|195993015|gb|EDX56974.1| porphobilinogen deaminase [Bacillus cereus W] gi|228811536|gb|EEM57873.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 309 Score = 362 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 116/304 (38%), Positives = 166/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAYINDAVTERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG I + + G D +G +AA + Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSILLKETVVGT--DPEKVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|89098939|ref|ZP_01171819.1| porphobilinogen deaminase [Bacillus sp. NRRL B-14911] gi|89086343|gb|EAR65464.1| porphobilinogen deaminase [Bacillus sp. NRRL B-14911] Length = 311 Score = 362 bits (930), Expect = 3e-98, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 163/305 (53%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + + + TKGD+I + TL+++GGKGL Sbjct: 2 RKIIVGSRRSKLALTQTNWVMDQLKKI--DDSFEFEVKEIVTKGDQILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ ++ EID AVHS KDMP L +GL I + RED RD IS Q+L L Sbjct: 60 FVKEIEQAMLDEEIDMAVHSMKDMPAVLPEGLVIGSIPEREDHRDALISKGHQTLDQLKP 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +V+GTSSLRR A LL R D+ + RG I+TRL KL + AI+LA AG+ R+ Sbjct: 120 GAVVGTSSLRRGAQLLAKRPDLEIKWIRGNIDTRLAKLETEEYDAIILAAAGLSRMGWTT 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + E L E P+ GQGA+ IE ++ + EL+ T +V ERAFL +++G Sbjct: 180 DTVSEFLEPEVCLPAVGQGALSIECRESDKELLELLSKFTCGTTNQTVRAERAFLHKMEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + G+V + DGK ++ G D + +G A+ + Sbjct: 240 GCQVPIAGYAVLNEKDEIELTGLVASPDGKTIYKEKVTG--ADPVEVGLRTAEKLIEKGA 297 Query: 302 KNVFN 306 K + + Sbjct: 298 KKLID 302 >gi|194097777|ref|YP_002000818.1| porphobilinogen deaminase [Neisseria gonorrhoeae NCCP11945] gi|239998278|ref|ZP_04718202.1| porphobilinogen deaminase [Neisseria gonorrhoeae 35/02] gi|240015900|ref|ZP_04722440.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA6140] gi|240080040|ref|ZP_04724583.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA19] gi|240114994|ref|ZP_04729056.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID18] gi|240122831|ref|ZP_04735787.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID332] gi|240125027|ref|ZP_04737913.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-92-679] gi|240127540|ref|ZP_04740201.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-93-1035] gi|268600662|ref|ZP_06134829.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID18] gi|268681446|ref|ZP_06148308.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID332] gi|268683614|ref|ZP_06150476.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-92-679] gi|268685917|ref|ZP_06152779.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-93-1035] gi|193933067|gb|ACF28891.1| porphobilinogen deaminase [Neisseria gonorrhoeae NCCP11945] gi|268584793|gb|EEZ49469.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID18] gi|268621730|gb|EEZ54130.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID332] gi|268623898|gb|EEZ56298.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-92-679] gi|268626201|gb|EEZ58601.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-93-1035] gi|317163558|gb|ADV07099.1| porphobilinogen deaminase [Neisseria gonorrhoeae TCDC-NG08107] Length = 311 Score = 362 bits (930), Expect = 3e-98, Method: Composition-based stats. Identities = 106/306 (34%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG I + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKLADDG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 AQELIG 304 >gi|126732359|ref|ZP_01748159.1| porphobilinogen deaminase [Sagittula stellata E-37] gi|126707228|gb|EBA06294.1| porphobilinogen deaminase [Sagittula stellata E-37] Length = 316 Score = 362 bits (930), Expect = 3e-98, Method: Composition-based stats. Identities = 137/307 (44%), Positives = 185/307 (60%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA AFETR LM +P I + T GD +R L EIG Sbjct: 9 PLKIGTRGSPLALAQAFETRERLMAAFSLPEDAFEICIIKTTGDDRAMIAADRPLKEIGN 68 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L++G ID AVHS KDMPT+ +GL + YLPRED RD FI H S+ D Sbjct: 69 KGLFTKEIEEALVAGRIDIAVHSMKDMPTEQPEGLILDCYLPREDPRDAFICHDHGSIHD 128 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +V+G+SSLRR+A LL R D+ V++FRG ++TRL KL++ A A LA AG+ R+K Sbjct: 129 LPVGAVVGSSSLRRRAQLLHRRPDLDVVEFRGNLQTRLKKLSDGVATATFLACAGLNRMK 188 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V + D P+ QGAI IE +++ QE++ I+ DT + ERAFLA L Sbjct: 189 IPGVPMFPIAEVDMLPAIAQGAIGIERRIDDATTQEMLAAIHDHDTGLRLAAERAFLARL 248 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A G+TL+ G +L DG I H +G + +GR A + + Sbjct: 249 DGSCETPIAGLAELDGATLHLRGEILRPDGSISHAGEISGAATEGAALGRTLADDLLSRA 308 Query: 301 NKNVFNF 307 + F++ Sbjct: 309 GEGFFDW 315 >gi|83941602|ref|ZP_00954064.1| porphobilinogen deaminase [Sulfitobacter sp. EE-36] gi|83847422|gb|EAP85297.1| porphobilinogen deaminase [Sulfitobacter sp. EE-36] Length = 317 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 131/305 (42%), Positives = 177/305 (58%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + P RIGTR SPLA+A A+ETR+ L +IP I+ + GD I +R L +IGGKG Sbjct: 9 ENPMRIGTRGSPLAMAQAYETRARLAAAFEIPQAAFEIVVIKVTGDVIQDRPLKDIGGKG 68 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT EIE+ L++G+ID AVHS KDMPT GL + YLPRED RD F++ T +L LA Sbjct: 69 LFTREIEEDLLAGKIDIAVHSMKDMPTIQPGGLLLDTYLPREDPRDAFVAPTLSALDQLA 128 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG+ RL + Sbjct: 129 EGAVVGTSSLRRRAQLLHQRPDLQVVEFRGNVQTRLKKLADGVAECTFLAVAGLNRLGMQ 188 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V ++ P+ QGAI IE + + ++ I+ T + ERAFL LDG Sbjct: 189 HVPATPIDDTLMLPAVAQGAIGIERRAGDLDTEAMLAAIHDTPTGQRLAAERAFLLTLDG 248 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC++ IAG A G TL+ G VL DG R+G +G D AQ + + Sbjct: 249 SCETPIAGLATLDGDTLHLRGQVLRPDGSEAIAGDRSGPIAQGGQMGVDLAQDLLAQAGP 308 Query: 303 NVFNF 307 F++ Sbjct: 309 GFFDW 313 >gi|94676875|ref|YP_588539.1| porphobilinogen deaminase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|123384158|sp|Q1LU25|HEM3_BAUCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|94220025|gb|ABF14184.1| porphobilinogen deaminase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 311 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 99/305 (32%), Positives = 160/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +I TR SPLA+ A R+ L+ + P I ++P+ T GD I ++ L + GG Sbjct: 1 MLNNILKIATRQSPLAIWQANYVRNQLLSFY--PTLLIELVPIVTSGDLILDKPLMKAGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K LF +E+E+ ++ D AVHS KD+ +G+ ++ RED RD FIS S+ Sbjct: 59 KRLFIKELEQAMLERRADIAVHSMKDITISFPEGIGLAVLCAREDPRDAFISTHYASIDL 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSS+RR+ L R D+ + D RG I TRL KL+ + A++LA AG+KRL Sbjct: 119 LPTGAVVGTSSMRRQCQLRERRPDLVMRDLRGNIGTRLEKLDKGEYDALILAAAGLKRLD 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ I++ + P+ GQG I IE + + ++ ++H T V+ ERA A+L Sbjct: 179 LAHRIRMIIDPTELLPAVGQGVIGIEYRLEDTHILSILAPLHHSATALRVSAERAMNAKL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ +V + DG + A +G+ A + + Sbjct: 239 AGGCQVPIGSYAEIEGDQIWLRALVGSPDGSLIIRSEGRAPLSQAEILGQSIANDLLYRG 298 Query: 301 NKNVF 305 +++ Sbjct: 299 AESIL 303 >gi|94987453|ref|YP_595386.1| porphobilinogen deaminase [Lawsonia intracellularis PHE/MN1-00] gi|123262097|sp|Q1MPL2|HEM3_LAWIP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|94731702|emb|CAJ55065.1| Porphobilinogen deaminase [Lawsonia intracellularis PHE/MN1-00] Length = 309 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 115/303 (37%), Positives = 165/303 (54%), Gaps = 3/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LA A + L ++ + ++ + TKGD I + L ++GGKGL Sbjct: 2 KKITIATRGSKLAFWQANYIKDQLQKMYSY--LEVDLMVIKTKGDHILDVPLAKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+SGE DCAVHS KD+P +L L ++A RED D+F+S +K L Sbjct: 60 FVKEIEEALLSGEADCAVHSMKDVPMELPFELCLAAITEREDPTDMFLSIKYSGVKSLPE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++++GTSSLRR+A LL R D+ +I RG I+TRL KL + AI++A AGIKRL Sbjct: 120 NALVGTSSLRRQAQLLALRPDLQIIPLRGNIDTRLRKLMAEEFDAIIMATAGIKRLGLIA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 L P+ GQGA+ IE EL +NH++T+ + ER FLA LDG Sbjct: 180 PYMSSLPCSVMLPAVGQGALGIEVQKERQDVLELFSFLNHKETYHCIQAERDFLAGLDGG 239 Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+A K T+ G+V SDG + + DA +IG ++ + Sbjct: 240 CQVPIAGYATICKQETICLEGLVAKSDGSVMIRNRLERSVSDAYDIGMTLSKILLAEGAD 299 Query: 303 NVF 305 ++ Sbjct: 300 DIL 302 >gi|229062158|ref|ZP_04199482.1| Porphobilinogen deaminase [Bacillus cereus AH603] gi|228717141|gb|EEL68817.1| Porphobilinogen deaminase [Bacillus cereus AH603] Length = 309 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 117/304 (38%), Positives = 166/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDITLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S KDLA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPDGLTIGCTPKRVDPRDAFISKNGESFKDLAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 +++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWDG 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG + + GN D +G +AA + Sbjct: 240 GCQVPIAGYATLKENDEIELTALVGSMDGSVLLKEIVVGN--DPKQVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|218905666|ref|YP_002453500.1| porphobilinogen deaminase [Bacillus cereus AH820] gi|228917102|ref|ZP_04080660.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929511|ref|ZP_04092530.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935783|ref|ZP_04098595.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229124004|ref|ZP_04253196.1| Porphobilinogen deaminase [Bacillus cereus 95/8201] gi|254724608|ref|ZP_05186391.1| porphobilinogen deaminase [Bacillus anthracis str. A1055] gi|226740627|sp|B7JQ57|HEM3_BACC0 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|218537761|gb|ACK90159.1| porphobilinogen deaminase [Bacillus cereus AH820] gi|228659306|gb|EEL14954.1| Porphobilinogen deaminase [Bacillus cereus 95/8201] gi|228823840|gb|EEM69660.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830090|gb|EEM75708.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842520|gb|EEM87610.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 309 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 115/304 (37%), Positives = 166/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 240 GCQVPIAGYATITENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|300024951|ref|YP_003757562.1| porphobilinogen deaminase [Hyphomicrobium denitrificans ATCC 51888] gi|299526772|gb|ADJ25241.1| porphobilinogen deaminase [Hyphomicrobium denitrificans ATCC 51888] Length = 310 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 138/305 (45%), Positives = 184/305 (60%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ RIGTR SPLALA A E R L H + I I + T GDR+T+R L++IGG Sbjct: 1 MQAARIRIGTRGSPLALAQAHEVRDRLAKAHGLSEDAISITIIKTTGDRVTDRPLSDIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE L + EID AVHS KDM T+L GL + A LPRED RD FIS ++ Sbjct: 61 KGLFTKEIEDALFAREIDIAVHSMKDMQTELPDGLALGAVLPREDPRDAFISLKHANISA 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRRK+ +L R D+SVIDFRG +ETRL KL + A A LA AG+ RL Sbjct: 121 LPTGAIVGTSSLRRKSQVLSIRPDLSVIDFRGNVETRLRKLKDGIAEATFLAVAGLNRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I I+ D P+ QGAI +E + +A+ V +N ++ +V ERAFLA L Sbjct: 181 LSDRITAIVPSADMLPAAAQGAIGLEIRTGDKEAEAFVAPLNDVNSQRAVTAERAFLARL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +GSC++ IA A G L F G VL+ DG+ ++VSR+G + +IG AA + + Sbjct: 241 EGSCRTPIAAHATIDGEQLSFRGQVLSLDGQQKYDVSRSGAANASRDIGLAAADEVLSKA 300 Query: 301 NKNVF 305 + + Sbjct: 301 DPALL 305 >gi|254431329|ref|ZP_05045032.1| porphobilinogen deaminase [Cyanobium sp. PCC 7001] gi|197625782|gb|EDY38341.1| porphobilinogen deaminase [Cyanobium sp. PCC 7001] Length = 321 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 105/313 (33%), Positives = 151/313 (48%), Gaps = 9/313 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ R L H I I ++T+GD+I + L +IG Sbjct: 1 MAGSTLRIASRRSQLAMVQTHWVRDELAKAHD--DLTITIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117 KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + H ++ Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVHAKHRDKT 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L SV+GTSSLRR A L ++ D RG + TRL KL++ + ++LA AG+ Sbjct: 119 LATLPEGSVVGTSSLRRLAQLRHHFPHLTFKDVRGNVITRLEKLDSGEFDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I E+++ + GQGA+ IE + E +KV+ H T ERAFL Sbjct: 179 RLGLGDRIHELIDPSISLHAVGQGALGIECREGDEPVLEQIKVLEHLPTARRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKG----STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 EL+G C+ I G L G+V + DG+ G + D IG A Sbjct: 239 RELEGGCQVPIGVNTRFDGAGESGELVLTGMVASLDGQRLIRDEARGPQDDPEAIGIALA 298 Query: 294 QYIRFISNKNVFN 306 + +R + Sbjct: 299 RSLRNQGAGEILE 311 >gi|114778663|ref|ZP_01453479.1| porphobilinogen deaminase [Mariprofundus ferrooxydans PV-1] gi|114551128|gb|EAU53689.1| porphobilinogen deaminase [Mariprofundus ferrooxydans PV-1] Length = 333 Score = 362 bits (929), Expect = 4e-98, Method: Composition-based stats. Identities = 115/301 (38%), Positives = 157/301 (52%), Gaps = 3/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L + P ++ + T+GD+I + L ++GGKGLFT Sbjct: 27 IRIATRRSPLALWQAEYIAAELEKM--SPDVTTELVKIVTRGDKILDVPLAKVGGKGLFT 84 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EI++ L G D AVHS KD+PT+L +G I A R D RD + T L L + Sbjct: 85 KEIDEALFDGRADVAVHSMKDVPTQLPEGTSIRALPERADPRDAAATITGGGLDTLPEGA 144 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSSLRR A L + RG I+TRL+K+ + AI+LA AGI+R+ E + Sbjct: 145 TIGTSSLRRVAQLQARFPTFKFVSVRGNIQTRLSKM-GQEVDAIILAAAGIRRMGMEDQM 203 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E ++ E P+ QG + I+T ++ LV +NH DT D ERAFLA L+G C+ Sbjct: 204 HEFIDTEMLLPAVAQGTLGIQTRNDDDVVNALVDRLNHADTVDRTRAERAFLARLEGGCQ 263 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IA FA G L G+V + DGKI G R D +G A I + + Sbjct: 264 VPIAAFATLDGDQLTLKGLVGSVDGKIVIRREIVGLRRDGAAMGIALADEILDAGARPIL 323 Query: 306 N 306 Sbjct: 324 E 324 >gi|254372115|ref|ZP_04987608.1| hydroxymethylbilane synthase [Francisella tularensis subsp. novicida GA99-3549] gi|151569846|gb|EDN35500.1| hydroxymethylbilane synthase [Francisella novicida GA99-3549] Length = 300 Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats. Identities = 105/303 (34%), Positives = 166/303 (54%), Gaps = 5/303 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK L Sbjct: 2 KQITIASRESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKAL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 59 FMKELEIAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ + Sbjct: 119 GAIVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELVE 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C AI +A + + +V +SDG + G+ D +G+ AQ + + Sbjct: 239 CHVAIGAYAELYNNQITLMAMVASSDGNKILKRKMIGD--DPTKLGKLLAQEMIALGAYK 296 Query: 304 VFN 306 + Sbjct: 297 ILE 299 >gi|122842|sp|P13446|HEM3_EUGGR RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase; Flags: Precursor gi|18412|emb|CAA33759.1| unnamed protein product [Euglena gracilis] Length = 480 Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats. Identities = 105/322 (32%), Positives = 162/322 (50%), Gaps = 21/322 (6%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K R+ TR SPLA+ A +S L + P + + P+ST+GD+I + L ++GGKGL Sbjct: 150 KTVRVATRKSPLAMWQAEFIQSELERL--WPGITVELQPMSTRGDKILDSPLAKVGGKGL 207 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKD 120 F +E+E L+ D AVHS KD+P +L +GL + R D D + +SL+D Sbjct: 208 FVKELETALLENRSDIAVHSTKDVPMELPEGLVLGVICKRHDPCDAIVFPKGSNLKSLED 267 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+ LL R D+ ++ RG + TRL KL++ AI+LA AG+KRL Sbjct: 268 LPHGARVGTSSLRRQCQLLLKRPDLKFLELRGNVNTRLAKLDSGDYDAIILAAAGLKRLG 327 Query: 181 KEKV----IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 I++ P+ GQGA+ IE N+P+ L++ ++H +V CERA Sbjct: 328 FSDRVLPGETNIIDPNVMCPAAGQGALSIELRTNDPEIAALLEPLHHIPDAVTVACERAM 387 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK---IFHEVSRNGN---------RCD 284 L+G C+ I+GFA K L V + GK I + + + Sbjct: 388 NRRLNGGCQVPISGFAQLKDGQLRMEARVGSVTGKGPLIIQSKTFRLPWSGRTWPQLQKE 447 Query: 285 AINIGRDAAQYIRFISNKNVFN 306 + +G + A + + + Sbjct: 448 SEALGVEVADMLLADGAQAYLD 469 >gi|325133945|gb|EGC56601.1| porphobilinogen deaminase [Neisseria meningitidis M13399] gi|325143900|gb|EGC66212.1| porphobilinogen deaminase [Neisseria meningitidis M01-240013] gi|325206609|gb|ADZ02062.1| porphobilinogen deaminase [Neisseria meningitidis M04-240196] Length = 311 Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats. Identities = 102/306 (33%), Positives = 166/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYTRLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ + P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 179 LDGRIRMILSESESLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 ARELIG 304 >gi|229048181|ref|ZP_04193750.1| Porphobilinogen deaminase [Bacillus cereus AH676] gi|228723168|gb|EEL74544.1| Porphobilinogen deaminase [Bacillus cereus AH676] Length = 309 Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats. Identities = 114/304 (37%), Positives = 164/304 (53%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G Sbjct: 180 DVITEHLDDTLCVPAVGQGALAIECREDDKDLLQLLAYINDTITERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG + + + G + +G +AA + Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|255262067|ref|ZP_05341409.1| porphobilinogen deaminase [Thalassiobium sp. R2A62] gi|255104402|gb|EET47076.1| porphobilinogen deaminase [Thalassiobium sp. R2A62] Length = 326 Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats. Identities = 134/305 (43%), Positives = 180/305 (59%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + P IGTR SPLALA A+ETR+ L +P I+ + T GDRI +R L EIGGKG Sbjct: 21 QSPLNIGTRGSPLALAQAYETRARLSAAFDLPSEAFTIVVIKTTGDRIIDRPLKEIGGKG 80 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT EIE ++ G+ID AVHS KDMP GL I YLPRED RD FI+ LKDLA Sbjct: 81 LFTREIEDAMLQGDIDIAVHSMKDMPVLQPDGLLIDTYLPREDNRDAFIALDGSGLKDLA 140 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR A L+ R D+++++FRG ++TRL KL + A A LA AG+ RLK + Sbjct: 141 EGATVGTSSLRRHAQLMNRRPDLNIVEFRGNLQTRLKKLGDGVAEATFLAMAGLNRLKMD 200 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V + + +D P+ QGAI IE ++ + E+++ I+ T + ERAFL LDG Sbjct: 201 DVPRTAIETDDMLPAVAQGAIGIERRADDSRMAEMLEAIHDGPTGQRLAAERAFLKALDG 260 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC++ IAG A G LY G VL DG + +G D +GR A + + + Sbjct: 261 SCETPIAGLAELNGGILYLRGEVLRVDGSDTVYDAASGPIEDGAEMGRVMAAKLLAEAGE 320 Query: 303 NVFNF 307 F++ Sbjct: 321 GFFDW 325 >gi|229093561|ref|ZP_04224662.1| Porphobilinogen deaminase [Bacillus cereus Rock3-42] gi|228689770|gb|EEL43576.1| Porphobilinogen deaminase [Bacillus cereus Rock3-42] Length = 309 Score = 361 bits (928), Expect = 5e-98, Method: Composition-based stats. Identities = 116/304 (38%), Positives = 166/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG I + + G D +G +AA + Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSILLKETVVGT--DPEKVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|225175616|ref|ZP_03729610.1| porphobilinogen deaminase [Dethiobacter alkaliphilus AHT 1] gi|225168945|gb|EEG77745.1| porphobilinogen deaminase [Dethiobacter alkaliphilus AHT 1] Length = 314 Score = 361 bits (928), Expect = 6e-98, Method: Composition-based stats. Identities = 113/304 (37%), Positives = 163/304 (53%), Gaps = 3/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK +G+R S LAL L P + + + T+GD+I + L++IG KG Sbjct: 2 KKTIVVGSRDSELALTQTHFVIGELQK--HFPDVDFTVKHIKTEGDKILDVALSKIGDKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKDL 121 LF +EIE L+S EID AVHS KD+PT + GLQI+ RED RD +I+ ++ L D Sbjct: 60 LFVKEIENALLSKEIDFAVHSMKDVPTAVPDGLQITTITEREDPRDCYIAKDGKTRLFDT 119 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +VIGTSSLRR A LL RSD ++ RG + TR KL+ H I+LAYAG+ RL Sbjct: 120 PQGAVIGTSSLRRSAQLLHQRSDFEIVPIRGNLNTRFRKLSEQDMHGIILAYAGVYRLGW 179 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I EI++ E P+ GQGA+ IET ++ +V +NH+ T ++ ERAFL +L+ Sbjct: 180 ADKITEIIDFEKSLPAVGQGALGIETRSDDDFTINIVSALNHDTTASAILAERAFLRQLE 239 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I + + L G+V DG G+ ++ +G+ AQ + Sbjct: 240 GGCQVPIGAYGRLEAEELVLDGVVAGLDGSTVLRDQVRGSADESDALGKKLAQKMVERGA 299 Query: 302 KNVF 305 + Sbjct: 300 DEIL 303 >gi|302838564|ref|XP_002950840.1| hypothetical protein VOLCADRAFT_85406 [Volvox carteri f. nagariensis] gi|300263957|gb|EFJ48155.1| hypothetical protein VOLCADRAFT_85406 [Volvox carteri f. nagariensis] Length = 355 Score = 361 bits (928), Expect = 6e-98, Method: Composition-based stats. Identities = 137/309 (44%), Positives = 190/309 (61%), Gaps = 5/309 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIG 59 K +IGTR SPLALA A+ TR L + I+ + T GD+I N+ L +IG Sbjct: 45 ATKTVKIGTRGSPLALAQAYLTRDLLKKNFPELNEEGALEIVIIKTTGDKILNQPLADIG 104 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLFT+EI+ L+ G+ID AVHS KD+PT L +G + LPRED+RDVFIS TA+ L Sbjct: 105 GKGLFTKEIDDALLGGKIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDVFISPTAKDLS 164 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +V+G++SLRR+A +L + V +FRG ++TRL KLN A LLA AG+KRL Sbjct: 165 ELPAGAVVGSASLRRQAQILAKYPHLKVENFRGNVQTRLRKLNEGACSATLLALAGLKRL 224 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I +IL+IE+ P+ QGAI I + +++L+ +NHE+T +V CERAFLA Sbjct: 225 DMTAHITKILSIEEMLPAVSQGAIGIACRTQDDASRKLLAALNHEETRIAVVCERAFLAA 284 Query: 240 LDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYI 296 LDGSC++ IAG+A+ L+F G+V DGK SR + DA+ G DA + + Sbjct: 285 LDGSCRTPIAGYAHKGSDGQLHFSGLVATPDGKQMMRTSRVASFTDADAVKAGEDAGREL 344 Query: 297 RFISNKNVF 305 + K +F Sbjct: 345 KATGPKELF 353 >gi|118479630|ref|YP_896781.1| porphobilinogen deaminase [Bacillus thuringiensis str. Al Hakam] gi|196039380|ref|ZP_03106686.1| hydroxymethylbilane synthase [Bacillus cereus NVH0597-99] gi|196044836|ref|ZP_03112070.1| porphobilinogen deaminase [Bacillus cereus 03BB108] gi|225866445|ref|YP_002751823.1| porphobilinogen deaminase [Bacillus cereus 03BB102] gi|229186706|ref|ZP_04313864.1| Porphobilinogen deaminase [Bacillus cereus BGSC 6E1] gi|158512516|sp|A0RJ81|HEM3_BACAH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800233|sp|C1ETR0|HEM3_BACC3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|118418855|gb|ABK87274.1| hydroxymethylbilane synthase [Bacillus thuringiensis str. Al Hakam] gi|196024324|gb|EDX62997.1| porphobilinogen deaminase [Bacillus cereus 03BB108] gi|196030007|gb|EDX68608.1| hydroxymethylbilane synthase [Bacillus cereus NVH0597-99] gi|225787726|gb|ACO27943.1| hydroxymethylbilane synthase [Bacillus cereus 03BB102] gi|228596719|gb|EEK54381.1| Porphobilinogen deaminase [Bacillus cereus BGSC 6E1] Length = 309 Score = 361 bits (928), Expect = 6e-98, Method: Composition-based stats. Identities = 115/304 (37%), Positives = 166/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|228910299|ref|ZP_04074116.1| Porphobilinogen deaminase [Bacillus thuringiensis IBL 200] gi|228849359|gb|EEM94196.1| Porphobilinogen deaminase [Bacillus thuringiensis IBL 200] Length = 309 Score = 361 bits (928), Expect = 6e-98, Method: Composition-based stats. Identities = 115/304 (37%), Positives = 165/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLSHINDAITERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + T+ +V + DG + + + G + +G +AA + Sbjct: 240 GCQVPIAGYATLKENDTIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAAGRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|255020135|ref|ZP_05292205.1| Porphobilinogen deaminase [Acidithiobacillus caldus ATCC 51756] gi|254970428|gb|EET27920.1| Porphobilinogen deaminase [Acidithiobacillus caldus ATCC 51756] Length = 319 Score = 361 bits (928), Expect = 6e-98, Method: Composition-based stats. Identities = 117/302 (38%), Positives = 170/302 (56%), Gaps = 4/302 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR SPLAL A R+ L+ H P + I+P++T+GDR+ L EIGGKGLF Sbjct: 17 PLRIGTRASPLALWQAEHVRAGLLRAH--PEIPVEIVPMTTQGDRMLAVPLHEIGGKGLF 74 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE L+ G +D AVHS KD+P + +GL+I+A L RED+RD ++S+T +DL Sbjct: 75 VKEIEAALLEGTVDLAVHSMKDVPAQQPEGLEIAAILAREDVRDAWVSNTFARPEDLPQG 134 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +G+SSLRR+A LL V+D RG + TRL KL+ I+LA AG+KRL + Sbjct: 135 GRVGSSSLRRRAQLLHRLPQTVVLDLRGNVATRLRKLDAGDYDGIVLAAAGLKRLGLLER 194 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ L E P+ GQGAI +E ++ + + L+K +N T V ER L G C Sbjct: 195 IRHYLEPELSLPAVGQGAIGVEIRSDDARTRTLLKPLNDPTTSRCVGAERHMNRLLGGDC 254 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A A G+ L G+V + DG+ G+ A ++G AQ + +++ Sbjct: 255 RLPVAALAEADGTGLRLRGLVASPDGRELLRAEAVGSL--AHSVGEQVAQALLAQGAQHI 312 Query: 305 FN 306 + Sbjct: 313 ID 314 >gi|206969979|ref|ZP_03230933.1| porphobilinogen deaminase [Bacillus cereus AH1134] gi|229192675|ref|ZP_04319634.1| Porphobilinogen deaminase [Bacillus cereus ATCC 10876] gi|206735667|gb|EDZ52835.1| porphobilinogen deaminase [Bacillus cereus AH1134] gi|228590765|gb|EEK48625.1| Porphobilinogen deaminase [Bacillus cereus ATCC 10876] Length = 309 Score = 361 bits (928), Expect = 6e-98, Method: Composition-based stats. Identities = 115/304 (37%), Positives = 164/304 (53%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAITERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEEVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|194336060|ref|YP_002017854.1| porphobilinogen deaminase [Pelodictyon phaeoclathratiforme BU-1] gi|238058995|sp|B4SFI2|HEM3_PELPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|194308537|gb|ACF43237.1| porphobilinogen deaminase [Pelodictyon phaeoclathratiforme BU-1] Length = 313 Score = 361 bits (928), Expect = 6e-98, Method: Composition-based stats. Identities = 122/307 (39%), Positives = 171/307 (55%), Gaps = 6/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG G Sbjct: 2 KKQLIIGTRSSPLALWQAEFTKAEL--SRHFPELDITLKLVKTTGDVLLDSPLSKIGDMG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT++IEK LI+ EID AVHS KD+PT GL I+++ RED RDV IS LKDL Sbjct: 60 LFTKDIEKHLITKEIDLAVHSLKDVPTATPDGLIITSFTEREDTRDVIISKNGVKLKDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ + TSSLRR + LL R D+ + D RG + TR K +N + A++LAYAG+ RL Sbjct: 120 QNAKMATSSLRRMSQLLSLRPDLDIRDIRGNLNTRFQKFDNGEFDAMMLAYAGVFRLNFS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EIL E P+ GQGA+ IET V++ + +E+V+++NH T ERA L L G Sbjct: 180 DRISEILPHEVMLPAVGQGALGIETRVDDEQTREIVRILNHSTTEYCCRAERALLRHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE--VSRNG--NRCDAINIGRDAAQYIRF 298 C+ I +A K TL V + DGKI +++ G + A G + A+ + Sbjct: 240 GCQIPIGAYASFKNGTLTLLAYVGSVDGKIGLHNNITKTGLTSPEQAEAAGIELAEELLK 299 Query: 299 ISNKNVF 305 + Sbjct: 300 QGADAIL 306 >gi|21328661|gb|AAM48667.1| porphobilinogen deaminase [uncultured marine proteobacterium] Length = 316 Score = 361 bits (928), Expect = 6e-98, Method: Composition-based stats. Identities = 134/305 (43%), Positives = 187/305 (61%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K P IGTR SPLALA A+ETR+ L +P I+ + T GDR+T+R L EIGGKG Sbjct: 9 KTPLNIGTRGSPLALAQAYETRARLAKAFDLPFEAFEIVVIMTTGDRVTDRPLKEIGGKG 68 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT EIE+ ++ G ID AVHS KDMP GL + YLPRED+RD FIS + +L DL+ Sbjct: 69 LFTREIEQAMLDGSIDIAVHSMKDMPVLQPDGLVLDTYLPREDVRDAFISLSGGALSDLS 128 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+A L R D+ V++FRG ++TRL KL N A A LA AG+KRL + Sbjct: 129 PGAVVGTSSLRRQAQLKLRRPDLQVVEFRGNLQTRLKKLENQVAEATFLAMAGLKRLNMD 188 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +V ++ + ++D P+ QGAI IE +N+ + +++ I+ +T + ERAFLA LDG Sbjct: 189 EVPRQAIEVDDMLPAVAQGAIGIERRINDGRMADMLAAIHDRETGQRLAAERAFLAALDG 248 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC++ IAG + +GST+ G VL DG D G++ A + + + Sbjct: 249 SCETPIAGLSELQGSTMRLRGEVLRPDGSDAIHDDMVVPIEDGAQAGKEMAAKLLEQAGR 308 Query: 303 NVFNF 307 F++ Sbjct: 309 GFFDW 313 >gi|225023639|ref|ZP_03712831.1| hypothetical protein EIKCOROL_00499 [Eikenella corrodens ATCC 23834] gi|224943521|gb|EEG24730.1| hypothetical protein EIKCOROL_00499 [Eikenella corrodens ATCC 23834] Length = 312 Score = 361 bits (928), Expect = 7e-98, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M I +R S LA+ A +S L ++ P + I+ L+T+GDRI ++TL++IGG Sbjct: 1 MIPHKLVIASRESALAMWQAEHIQSRLRTLY--PGCEVSILGLTTQGDRILDKTLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A RE D F+S+ Q L+D Sbjct: 59 KGLFVKELEQALSDGRADLAVHSIKDVPMVLPEGFALAAICERESPFDAFVSNNYQRLED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 119 LPAGAVVGTSSLRREAQLRARFPQLQVAPLRGNVQTRLAKLDQGDYAAIILAEAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ D P+ GQGA+ IE + + L+ +NH T V ERA L Sbjct: 179 LTQRIRHTLSPADSLPAAGQGALGIEIAAHRSELLPLLAPLNHAQTAACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L +G+V DG + R A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTKQDGLLTLHGLVGHPDGSVILREEAQAPREYADALGRAVAKKLADNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AQELI 303 >gi|294670387|ref|ZP_06735269.1| hypothetical protein NEIELOOT_02105 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307851|gb|EFE49094.1| hypothetical protein NEIELOOT_02105 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 312 Score = 361 bits (928), Expect = 7e-98, Method: Composition-based stats. Identities = 104/304 (34%), Positives = 168/304 (55%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL++IGGK Sbjct: 3 TPKKLVIASRESMLAMWQAEHIKGRLKALY--PDCEVEILGMTTRGDQILDRTLSKIGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E+ L G D AVHS KD+P +L +G ++A R D F+S+ L+++ Sbjct: 61 GLFIKELEQALQDGRADLAVHSIKDVPMELPEGFALAAIGERASPFDAFVSNQYARLEEM 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +++GTSSLRR+A L +++ RG ++TRL+KL+N A++LA AG++RL Sbjct: 121 PEGAIVGTSSLRREAQLRAKFPHLTIQPLRGNVQTRLSKLDNGDYDAVILAAAGLQRLGL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I+EIL+ D P+ GQGA+ IE ++++ +NHE+T V ERA L Sbjct: 181 DSRIREILSPADSLPAAGQGALGIEIAARRTDLADILRPLNHEETAACVTAERALARALG 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC+ +A + + L G+V DG + E S A +GR A+ + Sbjct: 241 GSCQVPLAAYCVMEDGLLTLNGLVGHPDGSVIIEASAQAPDAYANALGRAVAKRLADDGA 300 Query: 302 KNVF 305 + + Sbjct: 301 EELI 304 >gi|229087029|ref|ZP_04219183.1| Porphobilinogen deaminase [Bacillus cereus Rock3-44] gi|228696292|gb|EEL49123.1| Porphobilinogen deaminase [Bacillus cereus Rock3-44] Length = 309 Score = 361 bits (928), Expect = 7e-98, Method: Composition-based stats. Identities = 113/304 (37%), Positives = 164/304 (53%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S +LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPDGLTIGCIPKRVDPRDAFISKNGESFAELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 + +GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GATLGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+ GQGA+ IE ++ +L+ IN T +V+ ER FL +L+G Sbjct: 180 DVITEHLDETLCVPAVGQGALAIECRGDDKDLLQLLSHINDGVTERTVSAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + + +V + +G + + + G D +G +AA + Sbjct: 240 GCQVPIAGYATLQENNEIELTALVGSVEGSVLLKETVTG--MDPEQVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|309379620|emb|CBX21791.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 326 Score = 361 bits (927), Expect = 7e-98, Method: Composition-based stats. Identities = 106/306 (34%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 16 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 74 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNRYARLEE 133 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L +++ RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 134 MPESAVVGTSSLRREAQLRARYPHLAIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 193 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 194 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 253 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG I + A +GR A+ + Sbjct: 254 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSIVLQADAQAPAEYADALGRAVAKKLADDG 313 Query: 301 NKNVFN 306 + + Sbjct: 314 ARELIG 319 >gi|167636181|ref|ZP_02394485.1| porphobilinogen deaminase [Bacillus anthracis str. A0442] gi|170688695|ref|ZP_02879900.1| porphobilinogen deaminase [Bacillus anthracis str. A0465] gi|254687046|ref|ZP_05150904.1| porphobilinogen deaminase [Bacillus anthracis str. CNEVA-9066] gi|254741606|ref|ZP_05199293.1| porphobilinogen deaminase [Bacillus anthracis str. Kruger B] gi|167528402|gb|EDR91170.1| porphobilinogen deaminase [Bacillus anthracis str. A0442] gi|170667381|gb|EDT18139.1| porphobilinogen deaminase [Bacillus anthracis str. A0465] Length = 309 Score = 361 bits (927), Expect = 7e-98, Method: Composition-based stats. Identities = 115/304 (37%), Positives = 166/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASYKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 240 GCQVPIAGYATITENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|49478646|ref|YP_038514.1| porphobilinogen deaminase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|55976410|sp|Q6HD62|HEM3_BACHK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|49330202|gb|AAT60848.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 309 Score = 361 bits (927), Expect = 7e-98, Method: Composition-based stats. Identities = 116/304 (38%), Positives = 165/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG I + + G D +G +AA + Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSILLKETVVGT--DPEKVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|15676445|ref|NP_273584.1| porphobilinogen deaminase [Neisseria meningitidis MC58] gi|11386833|sp|Q9K0P6|HEM3_NEIMB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|7225764|gb|AAF40968.1| porphobilinogen deaminase [Neisseria meningitidis MC58] gi|254671891|emb|CBA04160.1| Porphobilinogen deaminase [Neisseria meningitidis alpha275] gi|308388723|gb|ADO31043.1| putative porphobilinogen deaminase [Neisseria meningitidis alpha710] gi|316985397|gb|EFV64345.1| porphobilinogen deaminase [Neisseria meningitidis H44/76] gi|319409917|emb|CBY90242.1| porphobilinogen deaminase (PBG; hydroxymethylbilane synthase; HMBS; pre-uroporphyrinogen synthase) [Neisseria meningitidis WUE 2594] gi|325127627|gb|EGC50543.1| porphobilinogen deaminase [Neisseria meningitidis N1568] gi|325139808|gb|EGC62341.1| porphobilinogen deaminase [Neisseria meningitidis CU385] gi|325200773|gb|ADY96228.1| porphobilinogen deaminase [Neisseria meningitidis H44/76] Length = 311 Score = 361 bits (927), Expect = 7e-98, Method: Composition-based stats. Identities = 104/306 (33%), Positives = 166/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYTRLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 ARELIG 304 >gi|52141043|ref|YP_085787.1| porphobilinogen deaminase [Bacillus cereus E33L] gi|61213349|sp|Q633Y0|HEM3_BACCZ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|51974512|gb|AAU16062.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Bacillus cereus E33L] Length = 309 Score = 361 bits (927), Expect = 8e-98, Method: Composition-based stats. Identities = 115/304 (37%), Positives = 165/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|161869466|ref|YP_001598634.1| porphobilinogen deaminase [Neisseria meningitidis 053442] gi|161595019|gb|ABX72679.1| porphobilinogen deaminase [Neisseria meningitidis 053442] Length = 316 Score = 361 bits (927), Expect = 8e-98, Method: Composition-based stats. Identities = 103/306 (33%), Positives = 165/306 (53%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 6 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++ R + D F+S+ L++ Sbjct: 64 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALATIGERANPFDAFVSNQYTRLEE 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK Sbjct: 124 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 184 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 244 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 303 Query: 301 NKNVFN 306 + + Sbjct: 304 AQELIG 309 >gi|229013679|ref|ZP_04170808.1| Porphobilinogen deaminase [Bacillus mycoides DSM 2048] gi|229135309|ref|ZP_04264103.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST196] gi|228648132|gb|EEL04173.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST196] gi|228747601|gb|EEL97475.1| Porphobilinogen deaminase [Bacillus mycoides DSM 2048] Length = 309 Score = 361 bits (927), Expect = 9e-98, Method: Composition-based stats. Identities = 117/304 (38%), Positives = 166/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S KDLA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPDGLTIGCTPKRVDPRDAFISKNGESFKDLAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 +++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWDG 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG + + GN D +G +AA + Sbjct: 240 GCQVPIAGYATLKENDAIELTALVGSMDGSVLLKEIVVGN--DPKQVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|30022552|ref|NP_834183.1| porphobilinogen deaminase [Bacillus cereus ATCC 14579] gi|218235229|ref|YP_002369271.1| porphobilinogen deaminase [Bacillus cereus B4264] gi|229129756|ref|ZP_04258723.1| Porphobilinogen deaminase [Bacillus cereus BDRD-Cer4] gi|229152666|ref|ZP_04280854.1| Porphobilinogen deaminase [Bacillus cereus m1550] gi|296504955|ref|YP_003666655.1| porphobilinogen deaminase [Bacillus thuringiensis BMB171] gi|39931461|sp|Q817R0|HEM3_BACCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226740629|sp|B7HE96|HEM3_BACC4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|29898110|gb|AAP11384.1| Porphobilinogen deaminase [Bacillus cereus ATCC 14579] gi|218163186|gb|ACK63178.1| hydroxymethylbilane synthase [Bacillus cereus B4264] gi|228630812|gb|EEK87453.1| Porphobilinogen deaminase [Bacillus cereus m1550] gi|228653672|gb|EEL09543.1| Porphobilinogen deaminase [Bacillus cereus BDRD-Cer4] gi|296326007|gb|ADH08935.1| porphobilinogen deaminase [Bacillus thuringiensis BMB171] Length = 309 Score = 361 bits (927), Expect = 9e-98, Method: Composition-based stats. Identities = 114/304 (37%), Positives = 164/304 (53%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G Sbjct: 180 DVITEHLDDTLCVPAVGQGALAIECREDDKDLLQLLAHINDTITERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG + + + G + +G +AA + Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|218767661|ref|YP_002342173.1| porphobilinogen deaminase [Neisseria meningitidis Z2491] gi|11386831|sp|Q9JVS4|HEM3_NEIMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|121051669|emb|CAM07972.1| putative porphobilinogen deaminase [Neisseria meningitidis Z2491] Length = 311 Score = 361 bits (927), Expect = 9e-98, Method: Composition-based stats. Identities = 104/306 (33%), Positives = 166/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 ARELIG 304 >gi|46907786|ref|YP_014175.1| porphobilinogen deaminase [Listeria monocytogenes serotype 4b str. F2365] gi|47093092|ref|ZP_00230869.1| porphobilinogen deaminase [Listeria monocytogenes str. 4b H7858] gi|226224157|ref|YP_002758264.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Listeria monocytogenes Clip81459] gi|254824385|ref|ZP_05229386.1| porphobilinogen deaminase [Listeria monocytogenes FSL J1-194] gi|254852180|ref|ZP_05241528.1| porphobilinogen deaminase [Listeria monocytogenes FSL R2-503] gi|254931496|ref|ZP_05264855.1| porphobilinogen deaminase [Listeria monocytogenes HPB2262] gi|254993453|ref|ZP_05275643.1| porphobilinogen deaminase [Listeria monocytogenes FSL J2-064] gi|300764778|ref|ZP_07074768.1| porphobilinogen deaminase [Listeria monocytogenes FSL N1-017] gi|55976452|sp|Q71ZB2|HEM3_LISMF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|259647801|sp|C1KVK3|HEM3_LISMC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|46881055|gb|AAT04352.1| porphobilinogen deaminase [Listeria monocytogenes serotype 4b str. F2365] gi|47018532|gb|EAL09288.1| porphobilinogen deaminase [Listeria monocytogenes str. 4b H7858] gi|225876619|emb|CAS05328.1| Putative porphobilinogen deaminase (hydroxymethylbilane synthase) [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605484|gb|EEW18092.1| porphobilinogen deaminase [Listeria monocytogenes FSL R2-503] gi|293583048|gb|EFF95080.1| porphobilinogen deaminase [Listeria monocytogenes HPB2262] gi|293593620|gb|EFG01381.1| porphobilinogen deaminase [Listeria monocytogenes FSL J1-194] gi|300514454|gb|EFK41511.1| porphobilinogen deaminase [Listeria monocytogenes FSL N1-017] gi|328465591|gb|EGF36820.1| porphobilinogen deaminase [Listeria monocytogenes 1816] gi|332311998|gb|EGJ25093.1| Porphobilinogen deaminase [Listeria monocytogenes str. Scott A] Length = 309 Score = 361 bits (926), Expect = 9e-98, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 167/306 (54%), Gaps = 7/306 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L Sbjct: 60 LFVSEVEQALSDEVIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNRVNSLDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 120 QGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL + Sbjct: 180 ENTTLKLEDIPPELCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKK 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ IAGFA ++F G+V +DG I + G + IG A+ + Sbjct: 240 LNGGCEIPIAGFATRANEVVHFKGLVGNADGSIILASEQAG--ANPSEIGNKVAEDLLSE 297 Query: 300 SNKNVF 305 + Sbjct: 298 GADTII 303 >gi|304388235|ref|ZP_07370355.1| hydroxymethylbilane synthase [Neisseria meningitidis ATCC 13091] gi|304337762|gb|EFM03911.1| hydroxymethylbilane synthase [Neisseria meningitidis ATCC 13091] Length = 311 Score = 361 bits (926), Expect = 9e-98, Method: Composition-based stats. Identities = 105/306 (34%), Positives = 166/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDRTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYTRLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 ARELIG 304 >gi|83855078|ref|ZP_00948608.1| porphobilinogen deaminase [Sulfitobacter sp. NAS-14.1] gi|83842921|gb|EAP82088.1| porphobilinogen deaminase [Sulfitobacter sp. NAS-14.1] Length = 317 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 131/305 (42%), Positives = 177/305 (58%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + P RIGTR SPLA+A A+ETR+ L +IP I+ + GD I +R L +IGGKG Sbjct: 9 ENPMRIGTRGSPLAMAQAYETRARLAAAFEIPQAAFEIVVIKVTGDVIQDRPLKDIGGKG 68 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT EIE+ L++G+ID AVHS KDMPT GL + YLPRED RD F++ T +L LA Sbjct: 69 LFTREIEEDLLAGKIDIAVHSMKDMPTIQPGGLLLDTYLPREDPRDAFVAPTLSALDQLA 128 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG+ RL + Sbjct: 129 ESAVVGTSSLRRRAQLLHQRPDLQVVEFRGNVQTRLKKLADGVAECTFLAVAGLNRLGMQ 188 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V ++ P+ QGAI IE + + ++ I+ T + ERAFL LDG Sbjct: 189 HVPATPIDDTLMLPAVAQGAIGIERRAGDLDTEAMLAAIHDTPTGQRLAAERAFLLTLDG 248 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC++ IAG A G TL+ G VL DG R+G +G D AQ + + Sbjct: 249 SCETPIAGLATLDGDTLHLRGQVLRPDGSEAIAGDRSGPIAQGGQMGVDLAQDLLAQAGP 308 Query: 303 NVFNF 307 F++ Sbjct: 309 GFFDW 313 >gi|323189475|gb|EFZ74755.1| porphobilinogen deaminase [Escherichia coli RN587/1] Length = 286 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 100/272 (36%), Positives = 150/272 (55%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 5 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 64 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+T SL L S++GTSSLRR+ L R D+ + RG Sbjct: 65 GLGLVTICEREDPRDAFVSNTYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 125 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTR 184 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 185 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 244 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 R G DA +G A+ + + + Sbjct: 245 IRGERRGAPQDAEQMGISLAEELLNNGAREIL 276 >gi|228993205|ref|ZP_04153126.1| Porphobilinogen deaminase [Bacillus pseudomycoides DSM 12442] gi|228999254|ref|ZP_04158834.1| Porphobilinogen deaminase [Bacillus mycoides Rock3-17] gi|229006801|ref|ZP_04164434.1| Porphobilinogen deaminase [Bacillus mycoides Rock1-4] gi|228754423|gb|EEM03835.1| Porphobilinogen deaminase [Bacillus mycoides Rock1-4] gi|228760451|gb|EEM09417.1| Porphobilinogen deaminase [Bacillus mycoides Rock3-17] gi|228766531|gb|EEM15173.1| Porphobilinogen deaminase [Bacillus pseudomycoides DSM 12442] Length = 309 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 114/304 (37%), Positives = 162/304 (53%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L+ EID AVHS KDMP L GL I R D RD FIS +S +DLA Sbjct: 60 FVKEIEHALLMKEIDMAVHSMKDMPAVLPDGLTIGCIPKRVDPRDAFISKNGESFEDLAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G Sbjct: 180 DVITEHLDETLCVPAVGQGALAIECREDDADLLQLLSHMNDAVTERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A K + +V + DG + + G + +G +AA + Sbjct: 240 GCQVPIAGYATLQKNDEIELTALVGSMDGSVLLKEIVTG--VNPEQVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|229163420|ref|ZP_04291371.1| Porphobilinogen deaminase [Bacillus cereus R309803] gi|228619989|gb|EEK76864.1| Porphobilinogen deaminase [Bacillus cereus R309803] Length = 309 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 115/304 (37%), Positives = 168/304 (55%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS +S KDLA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGESFKDLAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 +++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWDG 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLSHMNDAVTERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG + + + G D + +G +AA + Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVAGT--DPVEVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|229169206|ref|ZP_04296920.1| Porphobilinogen deaminase [Bacillus cereus AH621] gi|228614272|gb|EEK71383.1| Porphobilinogen deaminase [Bacillus cereus AH621] Length = 309 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 117/304 (38%), Positives = 166/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S KDLA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPDGLMIGCTPKRVDPRDAFISKNGESFKDLAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 +++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWDG 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG + + GN D +G +AA + Sbjct: 240 GCQVPIAGYATLKENDAIELTALVGSMDGSVLLKEIVVGN--DPKQVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|304407492|ref|ZP_07389144.1| porphobilinogen deaminase [Paenibacillus curdlanolyticus YK9] gi|304343443|gb|EFM09285.1| porphobilinogen deaminase [Paenibacillus curdlanolyticus YK9] Length = 325 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 110/314 (35%), Positives = 164/314 (52%), Gaps = 15/314 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDV---HKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 + R+GTR S LAL + L ++ H +P + + + TKGDRI + TL+++GG Sbjct: 10 RVIRVGTRQSALALTQTGQVIEQLKELSERHGLP-YTFETVKIVTKGDRILDVTLSKVGG 68 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L+ GEID AVHS KDMP +L +GL + R D RDV I+ Sbjct: 69 KGLFVKEIEQALLDGEIDLAVHSMKDMPYELPEGLMNGSVPKRVDPRDVLITADGGGFDA 128 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR + L R DI ++ RG I++RL KL + AI+LA AG+ R+ Sbjct: 129 LPNGAKVGTSSLRRASQLKNRRPDIEIVSIRGNIDSRLKKLETEQFDAIVLAAAGMTRMG 188 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I L ++ P+ GQGA+ IE + + L+ ++N + +V ER+FL L Sbjct: 189 WENRISSPLPVDICVPAVGQGALGIECREADSDVRYLLSLLNDPISELAVRAERSFLGAL 248 Query: 241 DGSCKSAIAGFAYC---------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 +G C+ I A +G+ + GIV + DG+I + G D +G Sbjct: 249 NGGCQIPIGAHATVAIPEGASNLEGALIELVGIVGSPDGEILLK--EIGKGTDPEALGLS 306 Query: 292 AAQYIRFISNKNVF 305 A +R + Sbjct: 307 VAAALRANGADQIL 320 >gi|255635113|gb|ACU17914.1| unknown [Glycine max] Length = 350 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 138/306 (45%), Positives = 190/306 (62%), Gaps = 6/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A+ETR LM H I I+ + T GD+I ++ L +IGGKGL Sbjct: 43 LRIGTRGSPLALAQAYETRDKLMASHAELAEEGAIQIVIIKTTGDKILSQPLADIGGKGL 102 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+G+ID AVHS KD+PT L + LPRED+RD FIS +A SL DL Sbjct: 103 FTKEIDEALINGDIDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLSAASLADLPS 162 Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S++GT+SLRRK+ +L ++V + FRG ++TRL KL+ A LLA AG+KRL Sbjct: 163 GSIVGTASLRRKSQILHRYPSLNVEENFRGNVQTRLRKLSEGIVQATLLALAGLKRLNMT 222 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + IL+I+D P+ QGAI I N+ K E + +NHE+T +V+CERAFL +L+G Sbjct: 223 ENVTSILSIDDMLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAVSCERAFLEKLEG 282 Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFI 299 SC++ IAG+A + F G+V + DG E SR G D I +G+DA + + Sbjct: 283 SCRTPIAGYASRNEDGNCLFRGLVASPDGIRVLETSRIGPYAFEDTIKMGKDAGEELLSR 342 Query: 300 SNKNVF 305 + F Sbjct: 343 AGPGFF 348 >gi|224081346|ref|XP_002306378.1| predicted protein [Populus trichocarpa] gi|222855827|gb|EEE93374.1| predicted protein [Populus trichocarpa] Length = 363 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 138/307 (44%), Positives = 188/307 (61%), Gaps = 6/307 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR LM H + I I+ + T GD+I ++ L +IGGKGL Sbjct: 56 IRIGTRGSPLALAQAHETRDKLMASHAELAEDGAIQIVIIKTTGDKILSQPLADIGGKGL 115 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A SL DL Sbjct: 116 FTKEIDEALINGDIDIAVHSMKDVPTYLPEMTILPCNLPREDVRDAFISMSATSLADLPA 175 Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S++GT+SLRRK+ +L +SV + FRG ++TRL KLN A LLA AG+KRL Sbjct: 176 GSIVGTASLRRKSQILHRFPSLSVEENFRGNVQTRLRKLNEGVVKATLLALAGLKRLNMT 235 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + IL I+D P+ QGAI I ++ K + +NHE+T +V CERAFL LDG Sbjct: 236 ENVTSILPIDDMLPAVAQGAIGIACRDSDDKMANYLASLNHEETRLAVACERAFLETLDG 295 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFI 299 SC++ IAG+A + F G+V + DG + SR G D I +G+DA + + Sbjct: 296 SCRTPIAGYARRDENGDCIFKGLVASPDGTRVLKTSRKGPYAFDDMIAMGKDAGKELLSQ 355 Query: 300 SNKNVFN 306 + F+ Sbjct: 356 AGPGFFD 362 >gi|30264532|ref|NP_846909.1| porphobilinogen deaminase [Bacillus anthracis str. Ames] gi|47529995|ref|YP_021344.1| porphobilinogen deaminase [Bacillus anthracis str. 'Ames Ancestor'] gi|49187356|ref|YP_030608.1| porphobilinogen deaminase [Bacillus anthracis str. Sterne] gi|65321833|ref|ZP_00394792.1| COG0181: Porphobilinogen deaminase [Bacillus anthracis str. A2012] gi|165871949|ref|ZP_02216590.1| porphobilinogen deaminase [Bacillus anthracis str. A0488] gi|167640713|ref|ZP_02398973.1| porphobilinogen deaminase [Bacillus anthracis str. A0193] gi|170708352|ref|ZP_02898796.1| porphobilinogen deaminase [Bacillus anthracis str. A0389] gi|177653999|ref|ZP_02936040.1| porphobilinogen deaminase [Bacillus anthracis str. A0174] gi|190566915|ref|ZP_03019831.1| porphobilinogen deaminase [Bacillus anthracis Tsiankovskii-I] gi|227817244|ref|YP_002817253.1| porphobilinogen deaminase [Bacillus anthracis str. CDC 684] gi|229601857|ref|YP_002868748.1| hydroxymethylbilane synthase [Bacillus anthracis str. A0248] gi|254736568|ref|ZP_05194274.1| porphobilinogen deaminase [Bacillus anthracis str. Western North America USA6153] gi|254754796|ref|ZP_05206831.1| porphobilinogen deaminase [Bacillus anthracis str. Vollum] gi|254757628|ref|ZP_05209655.1| porphobilinogen deaminase [Bacillus anthracis str. Australia 94] gi|39931467|sp|Q81LC7|HEM3_BACAN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800231|sp|C3P9E9|HEM3_BACAA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800232|sp|C3L6Z5|HEM3_BACAC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|30259190|gb|AAP28395.1| hydroxymethylbilane synthase [Bacillus anthracis str. Ames] gi|47505143|gb|AAT33819.1| porphobilinogen deaminase [Bacillus anthracis str. 'Ames Ancestor'] gi|49181283|gb|AAT56659.1| porphobilinogen deaminase [Bacillus anthracis str. Sterne] gi|164712239|gb|EDR17775.1| porphobilinogen deaminase [Bacillus anthracis str. A0488] gi|167511285|gb|EDR86671.1| porphobilinogen deaminase [Bacillus anthracis str. A0193] gi|170126727|gb|EDS95610.1| porphobilinogen deaminase [Bacillus anthracis str. A0389] gi|172081054|gb|EDT66132.1| porphobilinogen deaminase [Bacillus anthracis str. A0174] gi|190561906|gb|EDV15875.1| porphobilinogen deaminase [Bacillus anthracis Tsiankovskii-I] gi|227006938|gb|ACP16681.1| hydroxymethylbilane synthase [Bacillus anthracis str. CDC 684] gi|229266265|gb|ACQ47902.1| hydroxymethylbilane synthase [Bacillus anthracis str. A0248] Length = 309 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 115/304 (37%), Positives = 166/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASYKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 240 GCQVPIAGYATITENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|229111935|ref|ZP_04241479.1| Porphobilinogen deaminase [Bacillus cereus Rock1-15] gi|228671499|gb|EEL26799.1| Porphobilinogen deaminase [Bacillus cereus Rock1-15] Length = 309 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 114/304 (37%), Positives = 167/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 +++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEEYDAIILATAGLQRMGWDN 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDTITERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG + + + G + +G +AA + Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|88807654|ref|ZP_01123166.1| porphobilinogen deaminase [Synechococcus sp. WH 7805] gi|88788868|gb|EAR20023.1| porphobilinogen deaminase [Synechococcus sp. WH 7805] Length = 317 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 103/309 (33%), Positives = 157/309 (50%), Gaps = 5/309 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALEHLRIASRRSQLAMVQTNWVKAELESAH--PGMAISVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117 KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + ++ + Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNSKNADHT 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L SV+GTSSLRR A L + D RG + TRL KL+ + ++LA AG+ Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRHHFPHLQFKDVRGNVITRLEKLDAGQYDCLILAAAGLS 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +I+ + GQGA+ IE + P+ ++++V+ H T ERAFL Sbjct: 179 RLGFGDRIHQIIPGHISLHAVGQGALGIECVCDRPEVLKIIQVLEHAPTAGRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + G L G+V + DG R G+ D IGR A ++ Sbjct: 239 RELEGGCQVPIGVNSRIDGQELILTGMVASLDGLRLIRDERRGSLTDPEAIGRALAADLK 298 Query: 298 FISNKNVFN 306 + Sbjct: 299 SRGAGEILQ 307 >gi|332089030|gb|EGI94141.1| porphobilinogen deaminase [Shigella boydii 3594-74] Length = 287 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 99/272 (36%), Positives = 149/272 (54%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 185 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 R G DA +G A+ + + + Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNGAREIL 277 >gi|297537269|ref|YP_003673038.1| porphobilinogen deaminase [Methylotenera sp. 301] gi|297256616|gb|ADI28461.1| porphobilinogen deaminase [Methylotenera sp. 301] Length = 319 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 111/301 (36%), Positives = 165/301 (54%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R SPLA+ A +S L ++ P + I+ ++T GD+I + L ++GGKGLF Sbjct: 14 KLVIASRESPLAMWQALHIQSRLQALY--PSTIVEILGMTTTGDQILDTPLAKVGGKGLF 71 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A RED RD F+S+ SL+DL Sbjct: 72 VKELETALEDGRADLAVHSMKDVPMNLPEGFMMAATGEREDPRDAFVSNDFNSLEDLPEG 131 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S++GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+ RL Sbjct: 132 SIVGTSSLRRQSQLQARLPHLKIESLRGNLQTRLRKLDEGQYAAIILAAAGLIRLGLSAR 191 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +++ E P+ GQGA+ IE + N P ++ +NH DT V ERA L GSC Sbjct: 192 IRNVISPELSIPAVGQGALGIEINANRPDLLAVLAPLNHPDTQVCVEAERAMSRALAGSC 251 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A CKG + G V + DGK + NGNR A +G+ A + ++ Sbjct: 252 TVPLGAYATCKGEEISITGFVASVDGKQMLIETANGNRNQADALGKALANQLLAKGANDI 311 Query: 305 F 305 Sbjct: 312 L 312 >gi|167463591|ref|ZP_02328680.1| porphobilinogen deaminase [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383221|ref|ZP_08057032.1| porphobilinogen deaminase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152490|gb|EFX45276.1| porphobilinogen deaminase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 314 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 115/309 (37%), Positives = 167/309 (54%), Gaps = 9/309 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGGK 61 + +GTR S LAL + L + I + TKGDRI + TL+++GGK Sbjct: 2 RKIVVGTRQSALALTQTGQVVDELRKRCREAGLQVEFEIRKIVTKGDRILDVTLSKVGGK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +EIE+ +++GEID AVHS KDMP +L +GL I A R+D RD ++ SL +L Sbjct: 62 GLFVKEIEQAMLNGEIDLAVHSMKDMPFELPEGLVIGAIPERQDPRDCILTKGYVSLDEL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +++GTSSLRR + LL R D+++ RG I++RL KL + AI+LA AG+ R+ Sbjct: 122 PQGALVGTSSLRRGSQLLHARPDLTIRSVRGNIDSRLRKLESEGFDAIVLASAGLHRMGW 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I L E P+ GQGA+CIE + +L+K+I H+DT +V ERAFL L+ Sbjct: 182 EERISGYLPPEQCLPAVGQGALCIECRGGDAFVLDLLKLIQHDDTALAVRAERAFLGRLN 241 Query: 242 GSCKSAIAGFAYCK--GST---LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 G C+ + FA G T L +V + DG + +R G R +G A + Sbjct: 242 GGCQVPLGAFASVDHSGGTEPLLTLTAMVGSPDGSKLLKETRQGTR--PEELGLQLADAL 299 Query: 297 RFISNKNVF 305 + Sbjct: 300 IGRGADRIL 308 >gi|312114941|ref|YP_004012537.1| porphobilinogen deaminase [Rhodomicrobium vannielii ATCC 17100] gi|311220070|gb|ADP71438.1| porphobilinogen deaminase [Rhodomicrobium vannielii ATCC 17100] Length = 313 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 129/303 (42%), Positives = 188/303 (62%), Gaps = 2/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIGTR S LALA A E ++ L ++ + + T GD+I ++ L+ +GGKGL Sbjct: 8 RQIRIGTRGSALALAQATEVQNRLAAIYGD-EVKFERVVIKTTGDKILDKALSLVGGKGL 66 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E+ L + +ID AVHS KD+ L GL+I+ LPRED+RD FIS A+SL D+ Sbjct: 67 FTKELEEALFADQIDIAVHSMKDVQAFLPDGLEIACNLPREDVRDAFISMKAKSLADMPE 126 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +VIGT+S+RR+A + R D+ + FRG +++RL KL + A A LLA AG+ RL Sbjct: 127 GAVIGTASVRREAFIKNKRPDLKTVLFRGNVQSRLKKLEDGVADATLLASAGLNRLGLSD 186 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +ED P+P QGAI IE N+ +EL+ ++ E T +++ ERAFL+ELDGS Sbjct: 187 RITQHIPVEDMLPAPAQGAIGIEIRSNDQVTRELIMALHDEATGYAIDAERAFLSELDGS 246 Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C++ IA A G + F G +L DG +E +R G+ DA +G+DAAQ + K Sbjct: 247 CRTPIAALARYDGHGRVSFKGAILTPDGARIYETTREGSANDAAAMGKDAAQELYARGGK 306 Query: 303 NVF 305 +VF Sbjct: 307 DVF 309 >gi|155967344|gb|ABU41508.1| HemC [Heliophilum fasciatum] Length = 315 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 165/304 (54%), Gaps = 3/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +P IGTR S LAL L + P I + TKGD+I + L +IG KG Sbjct: 5 NRPIVIGTRDSALALWQTHWVLEQLQA--RFPEQRFEIKAIKTKGDKILDVALAKIGDKG 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E ++ GE+D AVHS KD+PT+L +GL + A RED RDV I TA++L +L Sbjct: 63 LFTKELEVAMLEGEVDMAVHSLKDLPTQLPEGLTVGAMCIREDYRDVLIGRTARTLAELK 122 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GT+SLRRK+ + + R D+ ++D RG ++TR+ K+ I+LA AG+ RL Sbjct: 123 PGARVGTASLRRKSQIWKVRPDLELLDIRGNLQTRMRKMEEQDLDGIILAAAGVLRLGWA 182 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + ++ + P+ GQG++ IE + +V +NH+DT D + ERA + L+G Sbjct: 183 DKITQYIDEDVCLPAVGQGSVGIEIRDGDEAIARVVGALNHKDTADCITAERALMRTLEG 242 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ I + +L +G+V + DG+ G+R +A ++G A + Sbjct: 243 GCQVPIGALGKLGEDDSLTLHGVVASLDGREICRDQVTGHRSEAADLGHRLADILIAKGA 302 Query: 302 KNVF 305 + Sbjct: 303 AEIL 306 >gi|90421073|ref|ZP_01228976.1| porphobilinogen deaminase [Aurantimonas manganoxydans SI85-9A1] gi|90334708|gb|EAS48485.1| porphobilinogen deaminase [Aurantimonas manganoxydans SI85-9A1] Length = 311 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 141/307 (45%), Positives = 190/307 (61%), Gaps = 1/307 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR S LA A A E R+ LM H +P I +ST GDRI +R L+E+GG Sbjct: 1 MASDIIRIGTRGSQLAKAQASEVRARLMAAHDLPEEAFEIEVISTTGDRILDRPLSEVGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE LI G +D A HS+KDM T +GL++SAYLPRED+RD FI TA ++ + Sbjct: 61 KGLFTKEIEAALIDGRVDIAAHSSKDMATASPEGLEVSAYLPREDVRDAFIGRTAATIDE 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IG++SLRR++LL R R D+ VI FRG +++RL KL + A LLA AG+ R+ Sbjct: 121 LPHGATIGSASLRRQSLLKRMRPDLKVITFRGNVQSRLRKLEEGQVDATLLALAGLNRMA 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + V EIL +E F P+PGQGAICI+ + + + LV I T ++ ERAFLAEL Sbjct: 181 MQDVATEILEVERFLPAPGQGAICIQNRIGDERVHGLVAAIADPRTTVALTAERAFLAEL 240 Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DGSC++ IA A + T+ +G++L DG HE R G DA +GR A + + Sbjct: 241 DGSCRTPIAAHAVLAEDGTVTLHGMILTPDGSRMHETRRTGIAADAEALGRLAGRDVLDA 300 Query: 300 SNKNVFN 306 + F+ Sbjct: 301 AGPGFFD 307 >gi|269215203|ref|ZP_05987933.2| hydroxymethylbilane synthase [Neisseria lactamica ATCC 23970] gi|269208048|gb|EEZ74503.1| hydroxymethylbilane synthase [Neisseria lactamica ATCC 23970] Length = 326 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 105/306 (34%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 16 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 74 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNRYARLEE 133 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L +++ RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 134 MPESAVVGTSSLRREAQLRARYPHLAIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 193 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 194 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 253 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 254 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILRADAQAPAGYADALGRAVAKKLADDG 313 Query: 301 NKNVFN 306 + + Sbjct: 314 ARELIG 319 >gi|255521282|ref|ZP_05388519.1| porphobilinogen deaminase [Listeria monocytogenes FSL J1-175] Length = 309 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 167/306 (54%), Gaps = 7/306 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L Sbjct: 60 LFVSEVEQALSDEVIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNRVNSLDELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 120 QGSVIGTSSLRRAAQLLKHRPDFVINPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL + Sbjct: 180 ENTTLKLEDIPPELCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKK 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ IAGFA ++F G+V +DG I + G + IG A+ + Sbjct: 240 LNGGCEIPIAGFATRANEVVHFKGLVGNADGSIILASEQAG--ANPSEIGNKVAEDLLSE 297 Query: 300 SNKNVF 305 + Sbjct: 298 GADTII 303 >gi|289434836|ref|YP_003464708.1| hypothetical protein lse_1471 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171080|emb|CBH27622.1| hemC [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 309 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 115/306 (37%), Positives = 169/306 (55%), Gaps = 7/306 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSGWVIARLKENY--PEIDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L G ID AVHS KD+P+ + +GL I A RE D F+ +T +S DL Sbjct: 60 LFVSEVEQALSDGAIDFAVHSMKDVPSSIKEGLTIGAIPKRESALDCFVFNTVESFHDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR A +LR R D + RG I+TRL KL++ AI+LA AG+ R+ Sbjct: 120 TAAVIGTSSLRRAAQILRQRPDFVIKPIRGNIDTRLQKLHDENFDAIILAKAGLSRMGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E ++ E P+ GQGA+ IE N+ + +++ I+HE+T V ER FL + Sbjct: 180 ENTTLKLEDISPELCLPAVGQGALAIECRENDKQICDMLASIHHEETGICVEAERVFLKK 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ IAGFA + F G+V +DG R G + + IG A+ + Sbjct: 240 LNGGCEIPIAGFATKTAGQIKFKGLVGNADGSTILSAERTG--ENPMTIGNQVAEALLSE 297 Query: 300 SNKNVF 305 + Sbjct: 298 GADTII 303 >gi|75759963|ref|ZP_00740032.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228902993|ref|ZP_04067133.1| Porphobilinogen deaminase [Bacillus thuringiensis IBL 4222] gi|74492560|gb|EAO55707.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228856669|gb|EEN01189.1| Porphobilinogen deaminase [Bacillus thuringiensis IBL 4222] Length = 309 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 114/304 (37%), Positives = 164/304 (53%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDAITERTVAAERVFLHRLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + T+ +V + DG + + + G + +G +AA + Sbjct: 240 GCQVPIAGYATLKENDTIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAAGRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|42783601|ref|NP_980848.1| porphobilinogen deaminase [Bacillus cereus ATCC 10987] gi|55976457|sp|Q72ZW2|HEM3_BACC1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|42739530|gb|AAS43456.1| porphobilinogen deaminase [Bacillus cereus ATCC 10987] Length = 309 Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats. Identities = 114/304 (37%), Positives = 165/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDGVTEKTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|323173419|gb|EFZ59048.1| porphobilinogen deaminase [Escherichia coli LT-68] Length = 286 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 98/272 (36%), Positives = 149/272 (54%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 5 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 64 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 65 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 125 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTR 184 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 185 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 244 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 R G +A +G A+ + + + Sbjct: 245 IRGERRGAPQNAEQMGISLAEELLNNGAREIL 276 >gi|254511195|ref|ZP_05123262.1| porphobilinogen deaminase [Rhodobacteraceae bacterium KLH11] gi|221534906|gb|EEE37894.1| porphobilinogen deaminase [Rhodobacteraceae bacterium KLH11] Length = 318 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 126/307 (41%), Positives = 176/307 (57%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A+ETR L +P I+ + T GD +R L E+G Sbjct: 11 PLKIGTRGSPLALAQAYETRRRLSTAFDLPEDAFEIVVIKTTGDNRAMIDADRPLKEVGN 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ ++ GEID AVHS KDMP +GL + +LPRED+RD FIS S+ D Sbjct: 71 KGLFTKEIEEAMLKGEIDIAVHSTKDMPVAQPQGLVLDTFLPREDVRDAFISPGLNSIHD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG++RL+ Sbjct: 131 LPRGAVVGTSSLRRRAQLLNRRPDLKVVEFRGNVQTRLKKLADGVADCTFLAMAGLRRLE 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V ++ +D P+ QGAI IE ++ +A ++ I+H +T + ER+ LA L Sbjct: 191 MADVPATAISPDDMLPAIAQGAIGIERRNDDSRAAGMLAAIHHPETAQRLAAERSLLAGL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A + L G VL DG G +G+ A + + Sbjct: 251 DGSCETPIAGLAEIRDGQLRLRGEVLRPDGTESIHEEAFGPVESGAKMGQAMADTLLKKA 310 Query: 301 NKNVFNF 307 N F++ Sbjct: 311 GPNFFDW 317 >gi|229147034|ref|ZP_04275394.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST24] gi|228636422|gb|EEK92892.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST24] Length = 309 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 114/304 (37%), Positives = 166/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDTITERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG + + + G + +G +AA + Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|218899632|ref|YP_002448043.1| porphobilinogen deaminase [Bacillus cereus G9842] gi|228967567|ref|ZP_04128593.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar sotto str. T04001] gi|226740628|sp|B7IIX5|HEM3_BACC2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|218545857|gb|ACK98251.1| porphobilinogen deaminase [Bacillus cereus G9842] gi|228792146|gb|EEM39722.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar sotto str. T04001] Length = 309 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 114/304 (37%), Positives = 165/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDAITERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + T+ +V + DG + + + G + +G +AA + Sbjct: 240 GCQVPIAGYATLKENDTIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAAGRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|110678608|ref|YP_681615.1| porphobilinogen deaminase [Roseobacter denitrificans OCh 114] gi|109454724|gb|ABG30929.1| porphobilinogen deaminase [Roseobacter denitrificans OCh 114] Length = 314 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 136/303 (44%), Positives = 182/303 (60%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR SPLA+A AFETR+ LM +P + I+ + GD I +R L +IGGKGLF Sbjct: 11 PLKIGTRGSPLAMAQAFETRARLMQAFDLPENAFTIVVIKVTGDMIQDRALKDIGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE+ L+S +ID AVHS KDMPT GL + YLPRED+RD FIS T + + DLA Sbjct: 71 TREIEEDLLSEKIDIAVHSMKDMPTLQPDGLILDTYLPREDVRDAFISPTLKGIADLAQG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRRKA LL R D++V++FRG ++TRL KL + A LA AG+ RLK ++V Sbjct: 131 AVVGTSSLRRKAQLLNRRPDLNVVEFRGNVQTRLKKLADGVAECTFLACAGLSRLKMDEV 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + P+ QGAI IE + + EL+ I+ T + ER FL LDGSC Sbjct: 191 PATPIETDHMLPAVAQGAIGIERRIADTNTAELLSAIHDGPTGQRLAAERNFLLTLDGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A G L G VL DG R+G D +GRD A+ + + + Sbjct: 251 ETPIAGLAELSGDHLRLRGEVLRPDGSEALNGERSGPISDGAAMGRDLAEKLLKRAGPSF 310 Query: 305 FNF 307 F++ Sbjct: 311 FDW 313 >gi|229019689|ref|ZP_04176496.1| Porphobilinogen deaminase [Bacillus cereus AH1273] gi|229025928|ref|ZP_04182320.1| Porphobilinogen deaminase [Bacillus cereus AH1272] gi|228735374|gb|EEL85977.1| Porphobilinogen deaminase [Bacillus cereus AH1272] gi|228741596|gb|EEL91789.1| Porphobilinogen deaminase [Bacillus cereus AH1273] Length = 309 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 115/304 (37%), Positives = 167/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + +S KDLA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGESFKDLAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWDD 179 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDAVTERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 240 GCQVPIAGYATLKEDDAIELTALVGSMDGSVLLKETVVGT--DPKQVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|298527685|ref|ZP_07015089.1| porphobilinogen deaminase [Desulfonatronospira thiodismutans ASO3-1] gi|298511337|gb|EFI35239.1| porphobilinogen deaminase [Desulfonatronospira thiodismutans ASO3-1] Length = 313 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 106/302 (35%), Positives = 161/302 (53%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL A S L + + + ++ + T GD+I + L ++GGKGL Sbjct: 2 KKVVIATRGSKLALWQAEHISSRLRERYS--GLEVELLKVKTTGDKILDVPLAKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+ G D AVHS KDMP +L +GL++ RE DV +S + + L Sbjct: 60 FVKEIEEALMDGRADIAVHSMKDMPAELPRGLKLGIIPERESRFDVLLSTSYPDISSLPT 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRR+A +L R D+ + RG ++TRL KL AI++A AG+ RL Sbjct: 120 GATVGTSSLRRQAQILHMRPDLEIQMLRGNLDTRLRKLKEGIYDAIIVAAAGMSRLNMHA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 L+ F P+ GQGA+ IE + + EL+ ++ T + CERAFLAEL+G Sbjct: 180 DYVTELSPPYFLPAVGQGALGIEYLQDRQELDELLGFMDDFSTRYCIECERAFLAELEGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IA + +G+ + G+V G+ S +G DA ++G D A+ + + Sbjct: 240 CQVPIACYCRHEGNNIQATGLVCDLKGERMIRKSVSGKPKDARSLGVDMARQVLEAGGRE 299 Query: 304 VF 305 + Sbjct: 300 IL 301 >gi|296080867|emb|CBI18797.3| unnamed protein product [Vitis vinifera] Length = 328 Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 138/307 (44%), Positives = 187/307 (60%), Gaps = 6/307 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A+ETR LM H I I+ + T GD+I + L +IGGKGL Sbjct: 21 VRIGTRGSPLALAQAYETRDKLMAAHSELAEEGAIQIVVIKTTGDKILTQPLADIGGKGL 80 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ L++G+ID AVHS KD+PT L + LPRED+RD FIS TA SL +L Sbjct: 81 FTKEIDEALLNGDIDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLTAASLSELPA 140 Query: 124 HSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S++GT+SLRRK+ LL ++V++ FRG ++TRL KLN A LLA AG+KRL Sbjct: 141 GSIVGTASLRRKSQLLHRYKSLNVLENFRGNVQTRLRKLNEGVVQATLLALAGLKRLNMT 200 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + IL+I++ P+ QGAI I N+ K + +NHE T +V CERAFL LDG Sbjct: 201 ENVTSILSIDEMLPAVAQGAIGIACRSNDDKMANYLASLNHEVTRLAVACERAFLETLDG 260 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFI 299 SC++ IAG+A + F G+V + DG E SR G D I +G+DA + + Sbjct: 261 SCRTPIAGYASHDEDGNCIFKGLVASPDGTKVLETSRKGPYALEDMIKMGKDAGEELLSR 320 Query: 300 SNKNVFN 306 + F+ Sbjct: 321 AGPGFFD 327 >gi|229175146|ref|ZP_04302662.1| Porphobilinogen deaminase [Bacillus cereus MM3] gi|228608282|gb|EEK65588.1| Porphobilinogen deaminase [Bacillus cereus MM3] Length = 309 Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 114/304 (37%), Positives = 166/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLQEEDYDAIILATAGLQRMGWDN 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDTVTERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG I + + G + +G +AA + Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSILLKETVVGT--NPEEVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|108761567|ref|YP_630875.1| porphobilinogen deaminase [Myxococcus xanthus DK 1622] gi|123374611|sp|Q1D8Z8|HEM3_MYXXD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|108465447|gb|ABF90632.1| porphobilinogen deaminase [Myxococcus xanthus DK 1622] Length = 314 Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 108/300 (36%), Positives = 159/300 (53%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L H P + ++ ++T+GDR + L+ +GGKGLF Sbjct: 5 VRIATRQSPLALWQARHVGALLTSRH--PGLEVTLVEMTTEGDRFLSAPLSAVGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G D AVHS KDM + +GL ++A RED RDVF +L L + Sbjct: 63 KEIEQALLDGRADIAVHSLKDMTSVFPEGLILAAVPEREDPRDVFCGLGGLTLDTLPQGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR +L R D+ ++ RG ++TRL + LLAYAG+KRL E VI Sbjct: 123 RVGTSSLRRSCILRSRRPDVDIVSVRGNVQTRLARTREQGLAGALLAYAGLKRLGLEDVI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++L E P+ GQG + I+ ++ + + L+ + H T +V ERA LA+L+G C Sbjct: 183 TQVLPPEVSLPAVGQGVLAIQCRTDDARVRALLVPLEHATTRIAVTAERALLAKLEGGCT 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +AG+A G T++ G+V DG G A +G A + ++ Sbjct: 243 VPLAGYATVSGDTVFLRGLVGRPDGTHVVRGEVRGPVSQAHALGESLADDLLSRGAADIL 302 >gi|324328367|gb|ADY23627.1| porphobilinogen deaminase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 309 Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 114/304 (37%), Positives = 165/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDGVTEKTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLINQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|332750972|gb|EGJ81377.1| porphobilinogen deaminase [Shigella flexneri 4343-70] gi|332751059|gb|EGJ81463.1| porphobilinogen deaminase [Shigella flexneri K-671] Length = 286 Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 99/272 (36%), Positives = 149/272 (54%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 5 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 64 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 65 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 125 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTR 184 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 185 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLCALVGAPDGSQI 244 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 R G DA +G A+ + + + Sbjct: 245 IRGERRGAPQDAEQMGISLAEELLNNGAREIL 276 >gi|228941631|ref|ZP_04104178.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974560|ref|ZP_04135126.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981155|ref|ZP_04141455.1| Porphobilinogen deaminase [Bacillus thuringiensis Bt407] gi|228778355|gb|EEM26622.1| Porphobilinogen deaminase [Bacillus thuringiensis Bt407] gi|228784963|gb|EEM32976.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817843|gb|EEM63921.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942243|gb|AEA18139.1| porphobilinogen deaminase [Bacillus thuringiensis serovar chinensis CT-43] Length = 309 Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 114/304 (37%), Positives = 164/304 (53%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G Sbjct: 180 EVITEHLDEALCVPAVGQGALAIECREDDKDLLQLLSHINDAITERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG + + + G + +G +AA + Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|163733941|ref|ZP_02141383.1| porphobilinogen deaminase [Roseobacter litoralis Och 149] gi|161393052|gb|EDQ17379.1| porphobilinogen deaminase [Roseobacter litoralis Och 149] Length = 314 Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 135/303 (44%), Positives = 181/303 (59%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR SPLA+A AFETR+ LM +P I+ + GD I +R L +IGGKGLF Sbjct: 11 PLKIGTRGSPLAMAQAFETRARLMQAFDLPEDAFSIVVIKVTGDMIQDRALKDIGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE+ L+S +ID AVHS KDMPT GL + YLPRED+RD F+S T + DLA Sbjct: 71 TREIEEDLLSEKIDIAVHSMKDMPTLQPDGLVLDTYLPREDVRDAFVSPTLSGIADLAQG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRRKA LL R D++V++FRG ++TRL KL + A LA AG+ RLK ++V Sbjct: 131 AVVGTSSLRRKAQLLNRRPDLNVVEFRGNVQTRLKKLADGVAECTFLASAGLNRLKMDEV 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + ++ P+ QGAI IE + + +L+ I+H +T + ER+FL LDGSC Sbjct: 191 PATPIEADEMLPAVAQGAIGIERRMADQNTADLLSAIHHIETGQRLTAERSFLLTLDGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A G L G VL DG R+G D +GR AQ + + Sbjct: 251 ETPIAGLAELDGDQLRLRGEVLRPDGSESLAGERSGPIADGAEMGRILAQELLDRAGPKF 310 Query: 305 FNF 307 F + Sbjct: 311 FEW 313 >gi|119357593|ref|YP_912237.1| porphobilinogen deaminase [Chlorobium phaeobacteroides DSM 266] gi|158512603|sp|A1BHD6|HEM3_CHLPD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|119354942|gb|ABL65813.1| porphobilinogen deaminase [Chlorobium phaeobacteroides DSM 266] Length = 313 Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 120/307 (39%), Positives = 176/307 (57%), Gaps = 6/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK IGTR SPLAL A T++ L + P +I + + T GD + + L++IG G Sbjct: 2 KKQLIIGTRSSPLALWQAEFTKAELSRHY--PELDITLKLVKTTGDVLLDSPLSKIGDMG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT++IEK LI+ EID AVHS KD+PT +GL I+++ RED RDV IS + ++L +L Sbjct: 60 LFTKDIEKHLIAKEIDLAVHSLKDVPTSTPEGLIITSFTEREDTRDVIISRSGETLLNLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ I TSSLRR + LL R D + D RG + TR K + + A++LAYAG+ RLK Sbjct: 120 QNARIATSSLRRMSQLLSMRPDFEICDIRGNLNTRFKKFDEGEFDAMMLAYAGVFRLKFS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EIL + P+ GQGA+ IET V++ + +E+V+++NH +T ERA L L G Sbjct: 180 DRISEILPHDVMLPAVGQGALGIETRVDDEQTREIVRILNHSNTEYCCRAERALLRHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFH--EVSRNG--NRCDAINIGRDAAQYIRF 298 C+ I +A K TL V + +GKI E+++ G + A G + A+ + Sbjct: 240 GCQIPIGAYASFKNGTLKLLAFVGSVNGKIGLRNEITKTGLVSPEQAEEAGIELAKELLK 299 Query: 299 ISNKNVF 305 + Sbjct: 300 QGADEIL 306 >gi|228923217|ref|ZP_04086507.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836423|gb|EEM81774.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 309 Score = 359 bits (923), Expect = 3e-97, Method: Composition-based stats. Identities = 115/304 (37%), Positives = 164/304 (53%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAITERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A K + +V + DG + + + G + +G +AA + Sbjct: 240 GCQVPIAGYATLTKNDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKRGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|283851270|ref|ZP_06368553.1| porphobilinogen deaminase [Desulfovibrio sp. FW1012B] gi|283573439|gb|EFC21416.1| porphobilinogen deaminase [Desulfovibrio sp. FW1012B] Length = 310 Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 162/304 (53%), Gaps = 2/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++ I TR S LAL A + L + + P + ++P+ TKGD+I + L ++GGKG Sbjct: 2 REKLVIATRSSKLALWQANHVSARLRETY--PGLVVDLLPIKTKGDKILDVPLAKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L+ G D AVHS KD+P + +GL + RED D +S L Sbjct: 60 LFVKEIEEALLDGRADLAVHSMKDVPAEQPQGLVVGIVPEREDPCDTLLSVAYAGFAALP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRRKA L+ R D+S+ID RG ++TR+ KL + AI++A AG+ RL Sbjct: 120 AGARVGTSSLRRKAQLMALRPDLSIIDLRGNLDTRVGKLLDGLFDAIVVATAGLNRLGLT 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 L +F P+ QGA+ +E ++P+ ++ +H ++ D+V ER FLA L+G Sbjct: 180 APQAVRLGPPEFLPAAAQGALGLEYRTDDPETAAMLAFFDHPESRDAVAAERGFLARLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IA A G L G+V + + G R +A +G+ A+ + + K Sbjct: 240 GCQVPIAAHATIDGDALALDGLVADPETGQTFRGNVTGKRSEARALGQGLAESVLAMGAK 299 Query: 303 NVFN 306 V Sbjct: 300 AVLE 303 >gi|71064670|ref|YP_263397.1| hydroxymethylbilane synthase [Psychrobacter arcticus 273-4] gi|71037655|gb|AAZ17963.1| hydroxymethylbilane synthase [Psychrobacter arcticus 273-4] Length = 345 Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats. Identities = 104/330 (31%), Positives = 169/330 (51%), Gaps = 31/330 (9%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR SPLAL A R L+ ++ P I ++ + TKGD+I + L +IGGKGLF Sbjct: 11 TLNIATRQSPLALWQAEHIRDRLLVLY--PEMTINLLKIVTKGDKILDTPLAKIGGKGLF 68 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E+ L + D AVHS KD+P L +GL + Y R D F+S+T S+ +L Sbjct: 69 VKELEQALYDKQADIAVHSLKDVPMDLPEGLTLGVYCKRASPTDAFVSNTYHSIDELPQG 128 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GT+SLRR+ + +R+D+ + RG + TRL+KL+ + AI+LA +G++RL+ Sbjct: 129 AVVGTASLRRQCQIKAYRADLQIKTLRGNVGTRLSKLDAGEYDAIILATSGLQRLELNAR 188 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ L+I+ P+ GQGA+ IE ++ + +L+ +N + + ERA L G C Sbjct: 189 IRSELDIDICLPAVGQGALAIECRADDDEVLKLLAPLNDDKARIRLIAERALNRHLQGGC 248 Query: 245 KSAIAGFAYCK---------------------GSTLYFYGIVLASDGKIFHEVSR----N 279 + IA +A + G TL+ G V DG +V + Sbjct: 249 QVPIAAYAVLQKADALAADNDDNGSVSNNNDAGDTLWLRGRVGQEDGSELLKVEKRQTLT 308 Query: 280 GNRCD----AINIGRDAAQYIRFISNKNVF 305 G++ + A +G + A+ + + Sbjct: 309 GSQAEQEAQANQLGIEVAEMLLEAGAGAIL 338 >gi|226326699|ref|ZP_03802217.1| hypothetical protein PROPEN_00552 [Proteus penneri ATCC 35198] gi|225204920|gb|EEG87274.1| hypothetical protein PROPEN_00552 [Proteus penneri ATCC 35198] Length = 291 Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats. Identities = 104/278 (37%), Positives = 153/278 (55%), Gaps = 2/278 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A + L H P + ++P+ TKGD I + L ++GG Sbjct: 1 MSKSTIRIATRQSPLAMWQALYVKEQLQLTH--PGLVVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+ +L++ Sbjct: 59 KGLFVKELELALLESRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYNALEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL+KL+N AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLKAQRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ E P+ GQGA+ I +N+ + + L +NH T V +RA L Sbjct: 179 LNERIRTPLSAEQSLPAVGQGAVGIGRQLNDNETRHLFDALNHSPTAILVKIKRAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR 278 +G C+ I +A + + F +V + DG+ Sbjct: 239 EGGCQVPIGTYAIWQDDKILFGALVGSPDGENIFRGEL 276 >gi|228954747|ref|ZP_04116769.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229071973|ref|ZP_04205183.1| Porphobilinogen deaminase [Bacillus cereus F65185] gi|229081729|ref|ZP_04214222.1| Porphobilinogen deaminase [Bacillus cereus Rock4-2] gi|229180740|ref|ZP_04308078.1| Porphobilinogen deaminase [Bacillus cereus 172560W] gi|228602718|gb|EEK60201.1| Porphobilinogen deaminase [Bacillus cereus 172560W] gi|228701574|gb|EEL54067.1| Porphobilinogen deaminase [Bacillus cereus Rock4-2] gi|228711132|gb|EEL63097.1| Porphobilinogen deaminase [Bacillus cereus F65185] gi|228804945|gb|EEM51542.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 309 Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats. Identities = 114/304 (37%), Positives = 164/304 (53%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G Sbjct: 180 EVITEHLDEALCVPAVGQGALAIECREDDKDLLQLLAHINDTITERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG + + + G + +G +AA + Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|88770654|gb|ABD51930.1| chloroplast hydroxymethylbilane synthase [Guillardia theta] Length = 346 Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats. Identities = 125/310 (40%), Positives = 187/310 (60%), Gaps = 5/310 (1%) Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIP----PHNIVIIPLSTKGDRITNRTL 55 M +P ++GTR SPLALA A+ETR L ++ + I ++T GD ++ L Sbjct: 13 MSGEPVIKLGTRGSPLALAQAYETRRRLAELFPEELGEKGEKVSINIINTSGDMELSKAL 72 Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115 +EIGGKGLFT+E++ L+ E+D VHS KD+PT L G + A LPRED RD FIS Sbjct: 73 SEIGGKGLFTKELDVALLKKEVDFCVHSMKDVPTYLPDGTHLEAMLPREDTRDAFISPKY 132 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 QS +++ +VIG++SLRR+A + I ++FRG ++TRL KL++ A LLA AG Sbjct: 133 QSFEEMPEGTVIGSASLRRQAQIFAKNPKIKCVNFRGNVQTRLRKLDDEVVDATLLALAG 192 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 +KR+ + ++L+ ++ P+ QGAI I+ ++ K + + +NH+DT V+CER+ Sbjct: 193 LKRMNMADCVTKVLDWDEMLPAVAQGAIGIQVRSDDDKTLKYISALNHKDTKTCVDCERS 252 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 FLA LDGSCK+ IAG A ++F G+V + DG R G+ D + IG+DA + Sbjct: 253 FLATLDGSCKTPIAGQARIIDGKIHFRGLVASPDGSKIFRAERVGDVSDYMKIGKDAGEE 312 Query: 296 IRFISNKNVF 305 IR + + F Sbjct: 313 IRKEAGEQFF 322 >gi|313633107|gb|EFS00005.1| porphobilinogen deaminase [Listeria seeligeri FSL N1-067] Length = 309 Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats. Identities = 115/306 (37%), Positives = 168/306 (54%), Gaps = 7/306 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSGWVIARLKENY--PEIDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L G ID AVHS KD+P+ + +GL I A RE D F+ +T S DL Sbjct: 60 LFVSEVEQALSDGAIDFAVHSMKDVPSSIKEGLTIGAIPKRESALDCFVFNTVGSFHDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR A +LR R D + RG I+TRL KL++ AI+LA AG+ R+ Sbjct: 120 TAAVIGTSSLRRAAQILRQRPDFVIKPIRGNIDTRLQKLHDENFDAIILAKAGLSRMGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E ++ E P+ GQGA+ IE N+ + +++ I+HE+T V ER FL + Sbjct: 180 ENTTLKLEDISPELCLPAVGQGALAIECRENDKQICDMLASIHHEETGICVEAERVFLKK 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ IAGFA + F G+V +DG R G + + IG A+ + Sbjct: 240 LNGGCEIPIAGFATKTAGQIKFKGLVGNADGSTILSAERTG--ENPMTIGNQVAEALLSE 297 Query: 300 SNKNVF 305 + Sbjct: 298 GADTII 303 >gi|304436298|ref|ZP_07396276.1| hydroxymethylbilane synthase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370703|gb|EFM24350.1| hydroxymethylbilane synthase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 311 Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats. Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M IGTR S LAL A ++ H P + + L+TKGDRI + L +IGG Sbjct: 1 MNSGTITIGTRASKLALWQANYVAEAIKKEH--PSCCVELRELTTKGDRILDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ ++ +D AVHS KDMPT++ GL I A R D D F+S +++D Sbjct: 59 KGLFTKELEQAMLDDAVDLAVHSLKDMPTEIPDGLVIGAITTRLDPGDAFVSAHYAAVED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + + +GTSSLRR+A LL R D+++ D RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPVGARVGTSSLRRRAQLLAVRPDLTICDLRGNVNTRLAKLDAGEFDAIVLAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ IL P+ GQGA+ IE + ++ + + ERAFL + Sbjct: 179 FERRIRTILPRSVMLPAVGQGALAIECRAGDAAILSAIEFLRDAGMTTAAQAERAFLRRV 238 Query: 241 DGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ + +A + ++ + DG+ +G A +G A+ + Sbjct: 239 EGGCQIPVGVYAEVDANGQISIDAMIASVDGQRICRSDAHGAGEQAEALGTALAEELLDA 298 Query: 300 SNKNVF 305 + + Sbjct: 299 GGREIL 304 >gi|155241760|gb|ABT18042.1| porphobilinogen deaminase [Heliobacillus mobilis] Length = 314 Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 162/305 (53%), Gaps = 3/305 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++P IGTR S LAL + L ++ P + + TKGD+I + L +IG KG Sbjct: 5 QRPVVIGTRDSALALWQTNWVMARLKEL--FPEQAFEVKAIKTKGDKILDVALAKIGDKG 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E ++ GEID AVHS KD+PT L +GL I A RED RD+ IS L L Sbjct: 63 LFTKELEVSMLEGEIDMAVHSLKDLPTVLPEGLTIGAMCVREDCRDILISRHG-GLDALP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GT+SLRRKA + + R D+ ++D RG ++TRL K+ ++LA AG+ RL Sbjct: 122 QGARVGTASLRRKAQIWQVRPDLELLDIRGNLQTRLRKMEEQNLDGLILAAAGVIRLGWA 181 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I + + ++ P+ GQG+I IE + + ++V +NH +T S+ ERA + L+G Sbjct: 182 EKISQYIPVDMCLPAVGQGSIGIEIREGDDEIAKIVGALNHYETSVSIRAERALMRTLEG 241 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I + L GIV + DGK G+ +G A+ + + Sbjct: 242 GCQVPIGSLGRLQEGRLVLDGIVASLDGKHVARGREEGDPSQPEEVGIRLAEQLLQQGAR 301 Query: 303 NVFNF 307 + N Sbjct: 302 EILNV 306 >gi|255070965|ref|XP_002507564.1| hydroxymethylbilane synthase [Micromonas sp. RCC299] gi|226522839|gb|ACO68822.1| hydroxymethylbilane synthase [Micromonas sp. RCC299] Length = 353 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 122/304 (40%), Positives = 177/304 (58%), Gaps = 4/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 +IGTR SPLALA A+ TR L ++ + I + T GD++ ++ L +IGGKGL Sbjct: 40 IKIGTRGSPLALAQAYMTRDLLKASFPELGNDGALEICIIKTTGDKVLDQPLADIGGKGL 99 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT E++ L+ G ID AVHS KD+PT L +G + LPRED+RD FIS L +L Sbjct: 100 FTRELDVALLDGRIDIAVHSMKDVPTYLPEGTILPCMLPREDVRDAFISVKYDDLSELPE 159 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S++GT+SLRR++ LL + ++FRG +++R+ KL LLA AG+ R+ + Sbjct: 160 GSLVGTASLRRQSQLLARFPGLKCVNFRGNVQSRIRKLQEGVVDCTLLAIAGLNRMDMTQ 219 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +IL+++ P+ QGAI I + K ++ +NHE+T +V CER+FLA LDGS Sbjct: 220 HATKILDVDVMLPAVAQGAIGIACRTGDSKQITYLESLNHEETRIAVECERSFLAALDGS 279 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFISN 301 C++ IAGFA G L F G+V A DG E SR + DAI G++A ++ + Sbjct: 280 CRTPIAGFARKDGDNLRFNGLVAALDGSEILETSRVTKWSYADAIAAGKEAGAELKKKAP 339 Query: 302 KNVF 305 F Sbjct: 340 AEFF 343 >gi|78357663|ref|YP_389112.1| porphobilinogen deaminase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123741224|sp|Q30Y29|HEM3_DESDG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78220068|gb|ABB39417.1| hydroxymethylbilane synthase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 316 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 103/304 (33%), Positives = 153/304 (50%), Gaps = 2/304 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL A + +M + + ++ L TKGD I + L ++GGKGL Sbjct: 2 KKIVIATRGSKLALWQAEHIKERIMQQYPD-SFEVELLVLKTKGDIILDVPLAKVGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+ G D AVHS KD+P +L +GL + A RE D +S L L Sbjct: 61 FVKEIEEALLDGRADIAVHSMKDVPMELPQGLTLGAIPEREVPTDSLLSARYDGLDALPQ 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR++ +L R D+ V RG ++TR+ KL + + AI++A +G+KRL + Sbjct: 121 GAVVGTSSLRRQSQILAMRPDLEVKWLRGNVQTRIRKLMDGEYDAIIMATSGLKRLGETA 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 L F P+ GQGA+ +E + E++ ++H + V ER FL L G Sbjct: 181 PFHSELGPPLFMPAVGQGALGLEYRSDRQDLAEMLAFLDHRPSRICVEAERGFLFGLQGG 240 Query: 244 CKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+A G G+V DG + G DA + G A ++ Sbjct: 241 CQVPIAGYAVMTGDNSFELTGLVAELDGTAVIRRTAAGTEADARDTGLTLAAQVKAAGAD 300 Query: 303 NVFN 306 + Sbjct: 301 AILQ 304 >gi|309784521|ref|ZP_07679159.1| porphobilinogen deaminase [Shigella dysenteriae 1617] gi|308927627|gb|EFP73096.1| porphobilinogen deaminase [Shigella dysenteriae 1617] Length = 286 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 99/272 (36%), Positives = 149/272 (54%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 5 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 64 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 65 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 125 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 184 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 185 TRELLVALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 244 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 R G DA +G A+ + + + Sbjct: 245 IRGERRGAPQDAEQMGISLAEELLNNGAREIL 276 >gi|254466587|ref|ZP_05079998.1| porphobilinogen deaminase [Rhodobacterales bacterium Y4I] gi|206687495|gb|EDZ47977.1| porphobilinogen deaminase [Rhodobacterales bacterium Y4I] Length = 323 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 137/307 (44%), Positives = 181/307 (58%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A+ETRS L +P I+ + T GD ++ L E+GG Sbjct: 15 PLKIGTRGSPLALAQAYETRSRLAAAFDLPQEAFEIVVIRTTGDNQALIAADKPLKELGG 74 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+SG ID AVHS KDMP +GL + YLPRED+RD FIS +SL D Sbjct: 75 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVAQPEGLALDTYLPREDVRDAFISPALKSLHD 134 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LA +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL+ A LA AG+ RL Sbjct: 135 LAEGAVVGTSSLRRRAQLLNRRPDLKVVEFRGNVQTRLRKLSEGVADCTFLAMAGLNRLA 194 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V + D P+ QGAI IE ++ +A E++ I+ +T + ERAFLA L Sbjct: 195 MADVPANPIETSDMLPAVAQGAIGIERRADDGRAAEMLAAIHDGETGLRLAAERAFLAAL 254 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A GSTL G VL DG + D +GR+ A + + Sbjct: 255 DGSCETPIAGLAELHGSTLRLRGEVLRPDGSESISDDQTCPVEDGAELGREMAAKLLEKA 314 Query: 301 NKNVFNF 307 K F++ Sbjct: 315 GKGFFDW 321 >gi|149181766|ref|ZP_01860257.1| porphobilinogen deaminase [Bacillus sp. SG-1] gi|148850507|gb|EDL64666.1| porphobilinogen deaminase [Bacillus sp. SG-1] Length = 310 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 166/305 (54%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL S L ++ + + TKGD+I + TL+++GGKGL Sbjct: 2 RKIIVGSRRSKLALTQTNWVISQLKELDS--SFEFEVKEIVTKGDQILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ ++ EID AVHS KDMP +L +GL I RED RD FIS L DL Sbjct: 60 FVKEIEQAMLDKEIDMAVHSMKDMPAELPEGLCIGCIPEREDHRDAFISKDHVKLADLPA 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 ++IGTSSLRR A +L R D+ + RG I+TRL KL AI+LA AG+ R+ Sbjct: 120 GAIIGTSSLRRGAQILAQRPDLEIKWIRGNIDTRLGKLETEDYDAIILAAAGLSRMGWTS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L+ E P+ GQGA+ IE ++ + L+ + +V ER FL +++G Sbjct: 180 NVVTEFLDPEVCVPAVGQGALSIECREDDEELLGLLGKFASDQVTKTVTAERTFLHKMEG 239 Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DGK ++ + G+ D + +G +AA + Sbjct: 240 GCQVPIAGYAELLQEEDVKLTVLVASPDGKDIYKETVTGS--DPVQVGEEAAALLTERGA 297 Query: 302 KNVFN 306 K + + Sbjct: 298 KALID 302 >gi|254366979|ref|ZP_04983015.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella tularensis subsp. holarctica 257] gi|134252805|gb|EBA51899.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella tularensis subsp. holarctica 257] Length = 300 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 107/303 (35%), Positives = 166/303 (54%), Gaps = 5/303 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I + S LAL ++ + IP I + T+GD I ++ L +IGGK L Sbjct: 2 KQITIASGESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKAL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 59 FMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ + Sbjct: 119 GAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELVE 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 179 RITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C AI +A + + +V +SDGK + G+ D +G+ AQ + + Sbjct: 239 CHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAYK 296 Query: 304 VFN 306 + Sbjct: 297 ILE 299 >gi|163942212|ref|YP_001647096.1| porphobilinogen deaminase [Bacillus weihenstephanensis KBAB4] gi|229836104|sp|A9VIT8|HEM3_BACWK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|163864409|gb|ABY45468.1| porphobilinogen deaminase [Bacillus weihenstephanensis KBAB4] Length = 309 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 116/304 (38%), Positives = 165/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S KDLA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPDGLTIGCTPKRVDPRDAFISKNGESFKDLAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 +++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWDG 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG + + G D +G +AA + Sbjct: 240 GCQVPIAGYATLKENDAIELTALVGSMDGSVLLKEIVVG--IDPKQVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|299535618|ref|ZP_07048939.1| porphobilinogen deaminase [Lysinibacillus fusiformis ZC1] gi|298728818|gb|EFI69372.1| porphobilinogen deaminase [Lysinibacillus fusiformis ZC1] Length = 310 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 115/299 (38%), Positives = 158/299 (52%), Gaps = 5/299 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + L P + + TKGD+I + L+++GGKGL Sbjct: 2 RKIIVGSRRSKLALTQTNWFINELKAAGV--PFEFEVKEIVTKGDQILDVQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L EID AVHS KDMP L GL I PRED RD FIS DL Sbjct: 60 FVKEIEQALYDKEIDFAVHSMKDMPAVLPDGLVIGCIPPREDARDAFISKGHVKFADLPA 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +V+GTSSLRR A LL R DI + RG ++TRL KL + AI+LA AG+KRL + Sbjct: 120 GAVVGTSSLRRSAQLLTVRPDIEIKWIRGNVDTRLAKLETEEYDAIILAAAGLKRLGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L +E P+ QG++ IE ++ + + + TW + ERAFLA +DG Sbjct: 180 DVVTEFLPVEQCLPAVAQGSLGIECRADDAELLAELGKLTDSFTWQEAHAERAFLAAMDG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A G + G+V A D + + + G DA IG + A + Sbjct: 240 GCQVPIAGYATSIGEEITLTGLVAAPDASVVFKETVVGT--DAQKIGEELAAILTEQGA 296 >gi|86604967|ref|YP_473730.1| porphobilinogen deaminase [Synechococcus sp. JA-3-3Ab] gi|86553509|gb|ABC98467.1| porphobilinogen deaminase [Synechococcus sp. JA-3-3Ab] Length = 310 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 102/304 (33%), Positives = 156/304 (51%), Gaps = 5/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R S LALA + L H P + + LST+GD I + L +IG KGLFT Sbjct: 1 MRIASRKSELALAQTYWVMGQLQAHH--PGLPLELHTLSTQGDIILDVALAKIGDKGLFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLA 122 +E+E L++G D AVHS KD+PT+L +GL + A RED D + L L Sbjct: 59 KELEVSLLNGSSDLAVHSLKDLPTRLPEGLVLGAITQREDPLDALVLREELRGYQLATLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR A L + + RG + TRL KL+ + ++LA AG+KRL +E Sbjct: 119 AGTVIGTSSLRRLAQLRHAFPHLQFKNVRGNLNTRLAKLDRGEYDGLILAVAGLKRLGQE 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I E+L+ + GQG++ IE + + EL++ + + ERAFL L+G Sbjct: 179 QRIHEVLDPSVSLYAVGQGSLGIECRQGDERILELIRPLADAEATARCLAERAFLRALEG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I + +G L+ G+V +G+ ++ G+ D +G A+ ++ Sbjct: 239 GCQVPIGVHSQVQGEELHLTGMVADLEGRQLIRDTQTGSTADPEAVGMALAEKLKRQGAD 298 Query: 303 NVFN 306 + Sbjct: 299 EILQ 302 >gi|206976024|ref|ZP_03236934.1| porphobilinogen deaminase [Bacillus cereus H3081.97] gi|217961956|ref|YP_002340526.1| porphobilinogen deaminase [Bacillus cereus AH187] gi|222097910|ref|YP_002531967.1| porphobilinogen deaminase [Bacillus cereus Q1] gi|229141205|ref|ZP_04269744.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST26] gi|229198593|ref|ZP_04325295.1| Porphobilinogen deaminase [Bacillus cereus m1293] gi|226740630|sp|B7HQM4|HEM3_BACC7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800234|sp|B9IZ39|HEM3_BACCQ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|206745776|gb|EDZ57173.1| porphobilinogen deaminase [Bacillus cereus H3081.97] gi|217066883|gb|ACJ81133.1| porphobilinogen deaminase [Bacillus cereus AH187] gi|221241968|gb|ACM14678.1| porphobilinogen deaminase [Bacillus cereus Q1] gi|228584875|gb|EEK42991.1| Porphobilinogen deaminase [Bacillus cereus m1293] gi|228642246|gb|EEK98538.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST26] Length = 309 Score = 358 bits (920), Expect = 5e-97, Method: Composition-based stats. Identities = 114/304 (37%), Positives = 164/304 (53%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDGVTEKTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG + + G D +G +AA + Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKEKVVGT--DPEKVGLEAADRLINQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|255066348|ref|ZP_05318203.1| hydroxymethylbilane synthase [Neisseria sicca ATCC 29256] gi|255049558|gb|EET45022.1| hydroxymethylbilane synthase [Neisseria sicca ATCC 29256] Length = 312 Score = 358 bits (920), Expect = 5e-97, Method: Composition-based stats. Identities = 102/306 (33%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL++IGG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKTLY--PDCEVEILGMTTRGDQILDKTLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L + ++A R + D F+S+ L++ Sbjct: 59 KGLFIKELEQALQDGRADLAVHSIKDVPMDLPEDFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + +++K +NH+ T V ERA L Sbjct: 179 LDERIRLILSEADSLPAAGQGALGIEIAAHRTDLLDVLKPLNHDVTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPATYADALGRAVAKKLADDG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 AQELIE 304 >gi|47566654|ref|ZP_00237476.1| porphobilinogen deaminase [Bacillus cereus G9241] gi|228960740|ref|ZP_04122379.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228987716|ref|ZP_04147827.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229158082|ref|ZP_04286152.1| Porphobilinogen deaminase [Bacillus cereus ATCC 4342] gi|47556684|gb|EAL15016.1| porphobilinogen deaminase [Bacillus cereus G9241] gi|228625401|gb|EEK82158.1| Porphobilinogen deaminase [Bacillus cereus ATCC 4342] gi|228771990|gb|EEM20445.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228798956|gb|EEM45931.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 309 Score = 358 bits (920), Expect = 5e-97, Method: Composition-based stats. Identities = 114/304 (37%), Positives = 166/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDN 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDGITEKTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLINQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|319789486|ref|YP_004151119.1| porphobilinogen deaminase [Thermovibrio ammonificans HB-1] gi|317113988|gb|ADU96478.1| porphobilinogen deaminase [Thermovibrio ammonificans HB-1] Length = 311 Score = 358 bits (920), Expect = 5e-97, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 174/306 (56%), Gaps = 6/306 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL + ++ + K P + ++ ++TKGD+I + L +IG KGLF Sbjct: 2 KIRIGTRKSKLALWQSEWVKAQIEK--KFPDVEVELVKITTKGDKILDVPLAKIGDKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+EIE+ ++ GE+D AVHS KD+P+KL KGL++ A+ RED RD +S +L+ L Sbjct: 60 TKEIEEAMLRGEVDIAVHSLKDVPSKLPKGLKLIAFSDREDPRDALLSCGRYTLETLPEG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRRKA L R D+ + D RG ++TR+ KL + AI+LA AG+KRL E+ Sbjct: 120 AVVGTSSLRRKAQLRILRPDLQIKDLRGNVDTRIRKLKEGQYDAIILAAAGVKRLGWEEE 179 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDGS 243 I EIL+ E PS QG + IE + + + +V+ +N ++ + ERAFL ++G Sbjct: 180 IDEILSPERMIPSVCQGILGIEGREGDSEVERIVREAVNSYESEVAATVERAFLRTVEGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS---RNGNRCDAINIGRDAAQYIRFIS 300 C+ + +A + + +G+ +H+ R + +A +IG A+ + Sbjct: 240 CQVPLGCYAVVNEDRILVRAFISDLNGRFYHKEEGVFRFKDLREADSIGVAVAERLLSAG 299 Query: 301 NKNVFN 306 K + Sbjct: 300 GKTILE 305 >gi|91200437|emb|CAJ73484.1| strongly similar to hydroxymethylbilane synthase (porphobilinogen deaminase) [Candidatus Kuenenia stuttgartiensis] Length = 319 Score = 358 bits (920), Expect = 5e-97, Method: Composition-based stats. Identities = 106/303 (34%), Positives = 162/303 (53%), Gaps = 2/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 KP +G+R S LAL S L ++ P I +ST GD+IT+ L+ +GG G+ Sbjct: 8 KPIIVGSRGSKLALTQTNWVISELKKLN--PGVEFEIKKISTSGDKITDVPLSRLGGVGV 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E LI +ID AVHSAKD+PT++ + L + A R D DV IS +L+ L Sbjct: 66 FTKELEVALIKEKIDLAVHSAKDIPTEVSEKLTLGAMPKRVDPSDVLISAKNVTLERLPG 125 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++ IGTSSLRRKA LL R D ++D RG ++TRL KL + I++A+AG+ R+ Sbjct: 126 NARIGTSSLRRKAQLLALRPDFEIVDLRGNLDTRLKKLEADDLDGIIVAHAGLIRIGYTG 185 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I EI+ E P+ GQG++ IE ++ + +++ ++ T +V ERA LA+L G Sbjct: 186 QISEIIPFEIMLPAVGQGSLGIEIRKDDERINKILSKMDDLHTRIAVEAERALLAKLQGG 245 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I A ++ ++ DG+ S G A +G + AQ + Sbjct: 246 CQVPIGAHAKVLNDEVHLEAVICTLDGERTIRDSHKGPANQAAAVGNELAQRMLDNGGDK 305 Query: 304 VFN 306 + Sbjct: 306 ILQ 308 >gi|78189475|ref|YP_379813.1| porphobilinogen deaminase [Chlorobium chlorochromatii CaD3] gi|123757008|sp|Q3AQF5|HEM3_CHLCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78171674|gb|ABB28770.1| Porphobilinogen deaminase [Chlorobium chlorochromatii CaD3] Length = 313 Score = 358 bits (920), Expect = 5e-97, Method: Composition-based stats. Identities = 118/307 (38%), Positives = 170/307 (55%), Gaps = 6/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK IGTR SPLAL A T++ L + P I + + T GD + + L++IG G Sbjct: 2 KKQLIIGTRSSPLALWQAEFTKAELSKHY--PDMEITLKLVKTTGDVLLDSPLSKIGDMG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT++IEK L++ EID AVHS KD+PT +GL I+++ RED RDV IS LKDL Sbjct: 60 LFTKDIEKHLLAREIDLAVHSLKDVPTSTPEGLIITSFTEREDTRDVIISKGGVKLKDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ + TSSLRR + LL R D+ + D RG + TR K ++ + A++LAYAG+ RL Sbjct: 120 PNARMATSSLRRMSQLLSVRPDLDIRDIRGNLNTRFQKFDDGEFDAMMLAYAGVYRLNFS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EIL + P+ GQGA+ IET V++ + +E+V+++NH T ERA L L G Sbjct: 180 DRISEILPHDMMLPAVGQGALGIETRVDDEQTREIVRILNHSTTEYCCRAERALLRHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFH--EVSRNG--NRCDAINIGRDAAQYIRF 298 C+ I +A TL V + DGK E+++ G + A G A+ + Sbjct: 240 GCQIPIGAYATFSNGTLKLLAFVGSVDGKTALRNEITKTGLTSPEQAEEAGIALAEELLK 299 Query: 299 ISNKNVF 305 + Sbjct: 300 QGADAIL 306 >gi|229105103|ref|ZP_04235754.1| Porphobilinogen deaminase [Bacillus cereus Rock3-28] gi|228678284|gb|EEL32510.1| Porphobilinogen deaminase [Bacillus cereus Rock3-28] Length = 309 Score = 358 bits (920), Expect = 6e-97, Method: Composition-based stats. Identities = 115/304 (37%), Positives = 166/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + +S KDLA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGESFKDLAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDNDLLQLLSHMNDAVTERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A K + +V + DG + + + G + +G +AA + Sbjct: 240 GCQVPIAGYATLTKDDAIELTALVGSMDGSVLLKETVVG--VEPKEVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|251773212|gb|EES53764.1| porphobilinogen deaminase [Leptospirillum ferrodiazotrophum] Length = 321 Score = 358 bits (920), Expect = 6e-97, Method: Composition-based stats. Identities = 111/302 (36%), Positives = 160/302 (52%), Gaps = 4/302 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LAL A + + + + T GD I + L+++GGKGLF Sbjct: 9 PIRIGTRGSELALWQARHVAAMIR---HTAGLESELTIIKTTGDMILSVPLSQVGGKGLF 65 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE+ LI+G ID AVHS KD+P L +GL+I A L RED RD F+S+ S L Sbjct: 66 VKEIEEALIAGTIDLAVHSMKDVPAFLPEGLEIGAILSREDPRDAFVSNAYSSFSSLPPG 125 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGTSSLRR A L + R D+ RG + TRL KL+ N+ AI+LA AG+ RL Sbjct: 126 ARIGTSSLRRMAQLKKRRPDLRFESLRGNVGTRLRKLDENQIDAIILAAAGLIRLGFSDR 185 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+E L +E P+ GQGA+ +E + + + ++ ++ +T V ER L+ LDG C Sbjct: 186 IREYLPVELSLPAVGQGALGLECRTGDHRIRTILARMHDPETTACVLAERGVLSALDGGC 245 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 + IA A + +L +G E +G +A +G +AAQ + + Sbjct: 246 QLPIAAHARTISPEQIELIARILDVEGTTLLEEHTSGPAKEAHRLGVEAAQKLLSRGGQK 305 Query: 304 VF 305 + Sbjct: 306 IL 307 >gi|297568516|ref|YP_003689860.1| porphobilinogen deaminase [Desulfurivibrio alkaliphilus AHT2] gi|296924431|gb|ADH85241.1| porphobilinogen deaminase [Desulfurivibrio alkaliphilus AHT2] Length = 311 Score = 358 bits (919), Expect = 6e-97, Method: Composition-based stats. Identities = 106/303 (34%), Positives = 170/303 (56%), Gaps = 2/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LALA + + + + P ++ ++ + TKGD+I + L ++GGKGL Sbjct: 3 KTIRIGTRASMLALAQSNWIKGRIEA--QYPGCSVELVKIVTKGDKIVDVPLAKVGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+ E+D AVHS KD+P +L +GL I RE D FI++ ++L ++ Sbjct: 61 FVKEIEEALLRREVDIAVHSMKDVPAELPEGLHIGIITEREKPFDAFITNNYKTLAEVPQ 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSSLRRKA L R R D+ + D RG ++TRL KL+ AI+LA AG+ RL Sbjct: 121 GATIGTSSLRRKAQLARLRPDLKIEDLRGNLDTRLRKLDEGVYDAIILAAAGLNRLDLFH 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ P+ QGA+ IE + +++ ++H +T +V+ ER++L L+G Sbjct: 181 RATFCFQPDEMLPAVAQGAVGIELRRADEDLLQMLSFMDHRETTLAVHAERSYLKRLEGG 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ +AGFA G TL G++ + DG + +G A +G + A+ + + + Sbjct: 241 CQVPLAGFATLAGQTLTINGLIASVDGGKMVKAKHSGPAAQAKTLGLELAEELLAMGGRE 300 Query: 304 VFN 306 + Sbjct: 301 ILE 303 >gi|149915548|ref|ZP_01904074.1| porphobilinogen deaminase [Roseobacter sp. AzwK-3b] gi|149810440|gb|EDM70283.1| porphobilinogen deaminase [Roseobacter sp. AzwK-3b] Length = 304 Score = 358 bits (919), Expect = 6e-97, Method: Composition-based stats. Identities = 127/302 (42%), Positives = 177/302 (58%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++GTR SPLALA A+ETRS L +PP I+ + T GDRI +R L EIGGKGLFT Sbjct: 1 MKLGTRGSPLALAQAYETRSRLSAAFDLPPEAFEIVVIKTTGDRIIDRPLKEIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EIE+ ++SGEID A+HS KDMP +GL + YLPRED+RD F+S L DL + Sbjct: 61 REIEEAMLSGEIDIAIHSMKDMPVLQPEGLVLDTYLPREDVRDAFVSPHVGGLADLEPGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRRKA +L + V++FRG ++TRL KL + A LA AG+ RL + +V Sbjct: 121 KVGTSSLRRKAQVLVAYPHLDVVEFRGNVQTRLKKLQDGVAACTFLAMAGLNRLGRSEVA 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ P+ QGAI IE ++ + E++ I+ T + ERAFLA LDGSC+ Sbjct: 181 TAAIETDEMLPAVAQGAIGIERRRDDTRTAEMLAAIHDTPTGQRLAAERAFLAALDGSCE 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG A G TL G VL DG + ++ D +G + + + + F Sbjct: 241 TPIAGLAELDGGTLRLRGQVLRPDGSEALDDDQSAPIEDGAKLGHEMGRKLLERAGPGFF 300 Query: 306 NF 307 ++ Sbjct: 301 DW 302 >gi|114765839|ref|ZP_01444932.1| porphobilinogen deaminase [Pelagibaca bermudensis HTCC2601] gi|114541838|gb|EAU44875.1| porphobilinogen deaminase [Roseovarius sp. HTCC2601] Length = 319 Score = 358 bits (919), Expect = 6e-97, Method: Composition-based stats. Identities = 131/307 (42%), Positives = 178/307 (57%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A ETR L +P I+ + T GD +R L EIG Sbjct: 11 PLKIGTRGSPLALAQAHETRDRLAAAFDLPQDAFEIVVIKTTGDDRAMIAADRPLKEIGN 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE++L+SG ID AVHS KDMPT+ +GL + YLPRED RD FIS L Sbjct: 71 KGLFTKEIEEQLLSGGIDIAVHSMKDMPTEQPEGLVLDCYLPREDERDAFISPGHAGLAA 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A A LA AG++R+ Sbjct: 131 LPEGTVVGTSSLRRRAQLLNRRPDLQVVEFRGNVQTRLKKLEDGVAAATFLAMAGLRRMD 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + ++ +D P+ QGAI IE ++ + +++ I+ DT + ER FLA L Sbjct: 191 MTDIPMTAMSPDDMLPAIAQGAIGIERRSDDSRTGDMLAAIHDTDTATRLAAERTFLAAL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A G L G +LA DG H +G D +GR A+ + + Sbjct: 251 DGSCETPIAGLAELDGDRLRLRGEILAPDGSASHAGELSGPAADGPAMGRALAEELLARA 310 Query: 301 NKNVFNF 307 + F + Sbjct: 311 GPDFFAW 317 >gi|293604316|ref|ZP_06686723.1| hydroxymethylbilane synthase [Achromobacter piechaudii ATCC 43553] gi|292817193|gb|EFF76267.1| hydroxymethylbilane synthase [Achromobacter piechaudii ATCC 43553] Length = 315 Score = 358 bits (919), Expect = 6e-97, Method: Composition-based stats. Identities = 110/301 (36%), Positives = 161/301 (53%), Gaps = 2/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A R L ++ P + ++ L+T+GD+I +RTL+++GGKGLF Sbjct: 7 LVIATRASRLALWQAEHVRDRLRTLY--PACAVELLTLTTRGDQILDRTLSKVGGKGLFV 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P L ++ A L R D RD F+S+ L DL + Sbjct: 65 KELENALLDGRADLAVHSLKDVPVDLQAPFELCAILDRADPRDAFVSNRYAGLADLPAGA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR++ + + V RG ++TRL KL+ + AI+LA AG++RL E I Sbjct: 125 VVGTSSLRRESQIRARFPTLVVKPLRGNLDTRLGKLDKGEYDAIVLAAAGLQRLGLESRI 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + +L+ D P+ GQGA+ IE + + + + T V ERA +L GSC+ Sbjct: 185 RSLLDPADSLPAAGQGALGIEIRNDRDDMRAWLAPLISAATTSCVQAERAVSRKLGGSCQ 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A FA G TL +V + DG R+G DA +G AAQ + + Sbjct: 245 VPLAAFAEISGDTLSLRALVASPDGVRMVHTRRSGPVADAQALGEAAAQELLDAGAAAIL 304 Query: 306 N 306 Sbjct: 305 Q 305 >gi|301055971|ref|YP_003794182.1| porphobilinogen deaminase [Bacillus anthracis CI] gi|300378140|gb|ADK07044.1| porphobilinogen deaminase [Bacillus cereus biovar anthracis str. CI] Length = 309 Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats. Identities = 114/304 (37%), Positives = 164/304 (53%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGVPFKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVG--IDPKEVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|317052496|ref|YP_004113612.1| porphobilinogen deaminase [Desulfurispirillum indicum S5] gi|316947580|gb|ADU67056.1| porphobilinogen deaminase [Desulfurispirillum indicum S5] Length = 308 Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats. Identities = 105/306 (34%), Positives = 165/306 (53%), Gaps = 7/306 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IGTR S LAL A ++ L + + + + TKGD+I + L ++GGKGLF Sbjct: 2 KIVIGTRASQLALWQAEHIKAELES--RWDDVQVELKKIITKGDKILDSPLAKVGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE +LI G ID AVHS KD+PT+ +GL++ A RED RD FIS +S+ +L Sbjct: 60 VKEIENELIDGTIDIAVHSMKDVPTEFPEGLELFAITEREDPRDAFISRNGKSMAELGQQ 119 Query: 125 S--VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 IGTSSLRR+A LL +++ RG ++TRL ++ + I+LA AG+KRL+ E Sbjct: 120 KDVTIGTSSLRRQAQLLTLYPHWNIVSIRGNVQTRLKRMEERQMDGIILAAAGMKRLELE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++KE + E P+ GQGA+ +E + +E ++ + H T V ERA L ++G Sbjct: 180 HLVKEYIAPEVMIPAIGQGALGLEVRSADTALKERLEFLRHPVTTQCVLAERALLRTMEG 239 Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ I +A + +++ +V + DGK + GN + +G A + Sbjct: 240 GCQVPIGAYAVPKENGSVFLNALVASVDGKEVVKGQLEGN--NPEELGVTLANQMLNSGA 297 Query: 302 KNVFNF 307 + + + Sbjct: 298 RAILSV 303 >gi|88797646|ref|ZP_01113235.1| porphobilinogen deaminase [Reinekea sp. MED297] gi|88779818|gb|EAR11004.1| porphobilinogen deaminase [Reinekea sp. MED297] Length = 313 Score = 357 bits (918), Expect = 8e-97, Method: Composition-based stats. Identities = 110/313 (35%), Positives = 172/313 (54%), Gaps = 11/313 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLAL A ++ L H P + ++ +STKGD+I + L+++GG Sbjct: 1 MSQ-IVRIATRKSPLALWQAEFVKAELEKHH--PDLQVELVKISTKGDQILDVALSKVGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E + +GE D AVHS KD+P ++ G +++ RE+ D F+S+ S+ D Sbjct: 58 KGLFIKELEVAMEAGEADMAVHSMKDVPMEMPAGFELATICERENPFDAFVSNDFDSIDD 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A +L R D+ V RG + TRL KL++ + AI+LA AG+ RL Sbjct: 118 LPQGAVLGTSSLRRQAQILAHRPDLDVRFLRGNVGTRLGKLDDGEYQAIVLACAGLIRLD 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I++ + P+ GQGA+ IE + +E ++ ++HE+T V+ ERA L Sbjct: 178 LQARIRQEIPGNLSLPAVGQGAVGIEIRAGDIALKERLQPLSHENTTLRVSAERAMNRVL 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFH----EVSRNGNR----CDAINIGRDA 292 +G C+ IAG+A L G V A DG E++ G A ++G Sbjct: 238 NGGCEVPIAGYAVLDDQVLKLEGRVGAVDGSKLLKSSAEMTLTGPVSQQISQATDLGHMV 297 Query: 293 AQYIRFISNKNVF 305 A+ + + + Sbjct: 298 ARDLLSQGAQALL 310 >gi|296314908|ref|ZP_06864849.1| hydroxymethylbilane synthase [Neisseria polysaccharea ATCC 43768] gi|296838093|gb|EFH22031.1| hydroxymethylbilane synthase [Neisseria polysaccharea ATCC 43768] Length = 311 Score = 357 bits (918), Expect = 9e-97, Method: Composition-based stats. Identities = 105/306 (34%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCKVEILGMTTRGDRILDRTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNRYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L +++ RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPESAVVGTSSLRREAQLRARYPHLAIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILRADAQAPAGYADALGRAVAKKLADDG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 ARELIG 304 >gi|317486609|ref|ZP_07945428.1| porphobilinogen deaminase [Bilophila wadsworthia 3_1_6] gi|316922143|gb|EFV43410.1| porphobilinogen deaminase [Bilophila wadsworthia 3_1_6] Length = 308 Score = 357 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 116/306 (37%), Positives = 161/306 (52%), Gaps = 5/306 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK I TR S LAL A + SL VH P + + + TKGD I + L ++GG Sbjct: 1 MEK--LVIATRGSRLALWQANHVKDSLEAVH--PGLAVELNIIKTKGDIILDVPLAKVGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L+SG D AVHS KD+P +L +GL + RED D+F+S SL++ Sbjct: 57 KGLFVKEIEEALLSGAADIAVHSMKDVPMELPEGLILGIVPEREDPTDLFLSVDYDSLEN 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A +L R D+ V+ RG ++TRL KL + AI++A AG+KRL Sbjct: 117 LPAGAVVGTSSLRRQAQVLAQRPDLEVVSLRGNVDTRLRKLTEGQFAAIIMATAGMKRLG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + L F P+ GQGA+ IE + E++ + H T V ER LA L Sbjct: 177 LSVPKECPLAPPAFIPAVGQGALGIEFREDRKDLAEMLSFMEHRPTRICVEAERGLLAGL 236 Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DG C+ IAG A T G+V DG + G +A +G A+ + Sbjct: 237 DGGCQVPIAGHAEMLDDGTFELEGLVGEVDGSVIIRRKVTGRADEARAVGFALARSLAED 296 Query: 300 SNKNVF 305 + Sbjct: 297 GGAEIL 302 >gi|189499889|ref|YP_001959359.1| porphobilinogen deaminase [Chlorobium phaeobacteroides BS1] gi|238058915|sp|B3EPK0|HEM3_CHLPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189495330|gb|ACE03878.1| porphobilinogen deaminase [Chlorobium phaeobacteroides BS1] Length = 313 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 122/307 (39%), Positives = 164/307 (53%), Gaps = 6/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK IGTR SPLAL A T++ L P I + + T GD + + L++IG G Sbjct: 2 KKKLIIGTRSSPLALWQADFTQAELSK--HFPDLEIELKLVKTTGDVLLDSPLSKIGDMG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT++IEK LISGEID AVHS KD+PT+ +GL +SA+ RED RDV IS +SLK L Sbjct: 60 LFTKDIEKHLISGEIDLAVHSLKDVPTETPEGLMLSAFTEREDTRDVIISKNGESLKTLK 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + I TSSLRR + LL R D + D RG + TR K + + A++LAYAG+ RL Sbjct: 120 QDAKIATSSLRRTSQLLSMRPDFQMGDIRGNLNTRFKKFDESDFDAMMLAYAGVHRLNFG 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EIL E P+ GQGA+ IET V++ +E+V V+N+ +T ERA L L G Sbjct: 180 DRISEILPHEVMLPAVGQGALGIETRVDDEATKEIVSVMNNVNTEFCTKAERALLRHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN----RCDAINIGRDAAQYIRF 298 C+ I +A K L+ V + DGK A G + A+ + Sbjct: 240 GCQIPIGSYASLKNGNLHLLAYVGSVDGKRTIRNEITKENCTLPEQAEQAGIELAEELLK 299 Query: 299 ISNKNVF 305 + Sbjct: 300 QGANEIL 306 >gi|229032118|ref|ZP_04188096.1| Porphobilinogen deaminase [Bacillus cereus AH1271] gi|228729208|gb|EEL80206.1| Porphobilinogen deaminase [Bacillus cereus AH1271] Length = 309 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 113/304 (37%), Positives = 164/304 (53%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 60 FVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLQEEDYDAIILATAGLQRMGWDD 179 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDAVTERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A + + +V + DG + + + G +G +AA + Sbjct: 240 GCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGTNS--EEVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|217969858|ref|YP_002355092.1| porphobilinogen deaminase [Thauera sp. MZ1T] gi|217507185|gb|ACK54196.1| porphobilinogen deaminase [Thauera sp. MZ1T] Length = 310 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 99/300 (33%), Positives = 152/300 (50%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A ++ L +H P + ++ ++T+GD+I +R L ++GGKGLF Sbjct: 9 IVIATRESRLALWQAEHIKARLEALH--PGCRVELLGMTTRGDQILDRPLAKVGGKGLFV 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P + + RE D F+S +SL D+ + Sbjct: 67 KELETALLDGRADIAVHSMKDVPMVMEPEFALPCITAREVPLDAFVSSRYESLADMPPGA 126 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR++ + + V RG ++TRL KL+ + AI+LA AG+ RL + I Sbjct: 127 VVGTSSLRRESQIHAQYPFLGVTSLRGNLDTRLRKLDEGQYDAIILAAAGLTRLGLGERI 186 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ E P+ GQGA+ IE ++ + DT V ERA L GSC+ Sbjct: 187 RSVMPAEVSLPAAGQGALGIECLSARADVIGWLQPLVDADTTACVLAERAVARALAGSCE 246 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + +A + L+ G V DG R G +A +GR A +R + + Sbjct: 247 VPLGAYAVMREGRLWLRGFVARPDGSTIVRAEREGAPAEAEALGRALADDLRAQGAEAIL 306 >gi|302756929|ref|XP_002961888.1| hypothetical protein SELMODRAFT_164683 [Selaginella moellendorffii] gi|300170547|gb|EFJ37148.1| hypothetical protein SELMODRAFT_164683 [Selaginella moellendorffii] Length = 353 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 130/309 (42%), Positives = 188/309 (60%), Gaps = 7/309 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A++TR L H + + I+ + T GD+I N+ L +IGGKGL Sbjct: 44 IRIGTRGSPLALAQAYQTRDLLKGAHPELAEDGALEIVIIKTTGDKILNQPLADIGGKGL 103 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ ID AVHS KD+PT L +G + L RED RD FIS A+SL +L Sbjct: 104 FTKEIDDALLDNRIDIAVHSMKDVPTYLPQGTILPCNLRREDARDAFISLKAKSLAELPP 163 Query: 124 HSVIGTSSLRRKALLLRWRSDISV-IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SV+GT+SLRRK+ +L+ + V +FRG ++TRL KL A LLA AG+KRL Sbjct: 164 GSVVGTASLRRKSQILKRYPHLQVDTNFRGNVQTRLKKLQEGIVTATLLALAGLKRLNMT 223 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + +L +++ P+ QGAI I + K + + +NHE+T +V+CERAFL LDG Sbjct: 224 EHVTGVLPMDEMLPAIAQGAIGIACRQGDEKMERYLASLNHEETRLAVSCERAFLEMLDG 283 Query: 243 SCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRF 298 SC++ IAG+A+ F G+V + DG E +R+G N + + +G+DAA+ + Sbjct: 284 SCRTPIAGYAHRDKLTDECKFRGLVASPDGTQVLETTRSGQYNLDEMVAMGKDAAKELLS 343 Query: 299 ISNKNVFNF 307 S ++ N+ Sbjct: 344 KSGPSLLNW 352 >gi|302817137|ref|XP_002990245.1| hypothetical protein SELMODRAFT_447969 [Selaginella moellendorffii] gi|300141954|gb|EFJ08660.1| hypothetical protein SELMODRAFT_447969 [Selaginella moellendorffii] Length = 353 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 130/309 (42%), Positives = 188/309 (60%), Gaps = 7/309 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A++TR L H + + I+ + T GD+I N+ L +IGGKGL Sbjct: 44 IRIGTRGSPLALAQAYQTRDLLKGAHPELAEDGALEIVIIKTTGDKILNQPLADIGGKGL 103 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ ID AVHS KD+PT L +G + L RED RD FIS A+SL +L Sbjct: 104 FTKEIDDALLDNRIDIAVHSMKDVPTYLPQGTILPCNLRREDARDAFISLKAKSLAELPP 163 Query: 124 HSVIGTSSLRRKALLLRWRSDISV-IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SV+GT+SLRRK+ +L+ + V +FRG ++TRL KL A LLA AG+KRL Sbjct: 164 GSVVGTASLRRKSQILKRYPHLQVDTNFRGNVQTRLKKLQEGIVTATLLALAGLKRLNMT 223 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + +L +++ P+ QGAI I + K + + +NHE+T +V+CERAFL LDG Sbjct: 224 EHVTGVLPMDEMLPAIAQGAIGIACRQGDEKMERYLASLNHEETRLAVSCERAFLEMLDG 283 Query: 243 SCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRF 298 SC++ IAG+A+ F G+V + DG E +R+G N + + +G+DAA+ + Sbjct: 284 SCRTPIAGYAHRDKLTDECKFRGLVASPDGTQVLETTRSGQYNFDEMVAMGKDAAKELLS 343 Query: 299 ISNKNVFNF 307 S ++ N+ Sbjct: 344 KSGPSLLNW 352 >gi|242060648|ref|XP_002451613.1| hypothetical protein SORBIDRAFT_04g004630 [Sorghum bicolor] gi|241931444|gb|EES04589.1| hypothetical protein SORBIDRAFT_04g004630 [Sorghum bicolor] Length = 356 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 130/306 (42%), Positives = 182/306 (59%), Gaps = 5/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGL Sbjct: 48 IRIGTRGSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGL 107 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L Sbjct: 108 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPA 167 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+G++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RL + Sbjct: 168 GSVVGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLNMAE 227 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+ Sbjct: 228 NATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVACEREFLAVLDGN 287 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFIS 300 C++ IA +AY F G++ + DG E +R+G D + +G+DA ++ + Sbjct: 288 CRTPIAAYAYRDKDGNCSFRGLLASPDGSKVFETTRSGPYSFDDMVELGKDAGHELKAKA 347 Query: 301 NKNVFN 306 F+ Sbjct: 348 GPGFFD 353 >gi|320529107|ref|ZP_08030199.1| porphobilinogen deaminase [Selenomonas artemidis F0399] gi|320138737|gb|EFW30627.1| porphobilinogen deaminase [Selenomonas artemidis F0399] Length = 311 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 107/306 (34%), Positives = 166/306 (54%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M IGTR S LAL A L H P +V+ ++TKGD+I + L +IGG Sbjct: 1 MNSGTITIGTRASKLALWQAKFVAGELQKRH--PSVTVVLKEMTTKGDKILDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ +++G+ID AVHS KDMPT++ GL I A R D D F+S+ ++++ Sbjct: 59 KGLFTKELEQAMLAGDIDIAVHSLKDMPTEIPAGLIIGAITARLDPGDAFVSNQYAAIEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+A LL R D+ ++D RG + TRL KL+ + A++LA AG++RL Sbjct: 119 LPAGARVGTSSLRRRAQLLAVRPDLVLLDLRGNVNTRLEKLDAGEFDAVVLAAAGLRRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ +L P+ GQGA+ IE ++ + + + D + ERAFL + Sbjct: 179 LGDRIRSVLPRAMMLPAVGQGALAIECRADDAEICAAIGFMCDADMTAAAAAERAFLGRV 238 Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ + +A G LY ++ + DG +G A IG A+ + + Sbjct: 239 EGGCQIPVGVYAEIGDGDMLYVDAMIASVDGMRVCRSRASGRPAQAAQIGVALAEELLDM 298 Query: 300 SNKNVF 305 + + Sbjct: 299 GGREIL 304 >gi|82703803|ref|YP_413369.1| porphobilinogen deaminase [Nitrosospira multiformis ATCC 25196] gi|82411868|gb|ABB75977.1| hydroxymethylbilane synthase [Nitrosospira multiformis ATCC 25196] Length = 321 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 110/304 (36%), Positives = 161/304 (52%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 I TR S LAL A R L +++ P I ++T+GD+I + TL++IGGK Sbjct: 6 TPNKIVIATRESALALWQANFIRDRLAELY--PQMEFQISGMTTRGDQILDVTLSKIGGK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E+ L G D AVHS KD+P + G ++A RED RD F+S+ L L Sbjct: 64 GLFIKELEQALEDGRADIAVHSMKDVPMDMPAGFALAAITEREDPRDAFVSNKYARLDAL 123 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SV+GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL Sbjct: 124 PPGSVVGTSSLRRESQLRARFPHLQVQPLRGNVQTRLRKLDEGQFAAIILAAAGLKRLGL 183 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I +L+ + P+ GQGA+ IE + +L++ ++H T V ERA L Sbjct: 184 AERITALLSPDLSLPAVGQGALGIECRADRSDLIKLMEPLHHIPTARCVEAERAMSRALG 243 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC+ + GFA G L G V + DG NG+ D +IG A+ ++ Sbjct: 244 GSCEVPLGGFAEIDGHVLRLRGFVASQDGIRMVSDELNGSPDDCASIGAQLAKNLKAKGA 303 Query: 302 KNVF 305 + + Sbjct: 304 EEIL 307 >gi|229098938|ref|ZP_04229873.1| Porphobilinogen deaminase [Bacillus cereus Rock3-29] gi|228684436|gb|EEL38379.1| Porphobilinogen deaminase [Bacillus cereus Rock3-29] Length = 309 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 115/304 (37%), Positives = 165/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKGL Sbjct: 2 RKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L+ EID AVHS KDMP L +GL I R D RD FIS + +S KDLA Sbjct: 60 FVKEIEHALLMKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGESFKDLAE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDD 179 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G Sbjct: 180 EVITEHLDETLCVPAVGQGALAIECRKDDNDLLQLLSHMNDAVTERTVAAERVFLHKLEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A K + +V + DG + + + G + +G +AA + Sbjct: 240 GCQVPIAGYATLTKDDAIELTALVGSMDGSVLLKETVVG--VEPKEVGLEAADRLIKQGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELI 301 >gi|84500376|ref|ZP_00998625.1| porphobilinogen deaminase [Oceanicola batsensis HTCC2597] gi|84391329|gb|EAQ03661.1| porphobilinogen deaminase [Oceanicola batsensis HTCC2597] Length = 315 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 127/304 (41%), Positives = 177/304 (58%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P +IGTR SPLALA A E R L +PP + + T GDR+ +R L EIGGKGL Sbjct: 10 RPLKIGTRGSPLALAQAHEARDRLAHAFDLPPEAFEVCVIQTTGDRVQDRPLKEIGGKGL 69 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT EIE L++G ID AVHS KDMP +GL + YLPRED RD F+S+ + L + Sbjct: 70 FTREIEHALLTGGIDIAVHSMKDMPVLQPEGLLLDCYLPREDPRDAFVSNLYERLDQIPA 129 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRR+A +L R D+ V++FRG ++TRL KL + A A LA AG+ RL + Sbjct: 130 GARVGTSSLRRRAQVLVRRPDLEVVEFRGNVQTRLRKLADGVASATFLAMAGLNRLDRAS 189 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + + L ++ P+ QGAI IE ++ L++ I+ +T + ERAFLA LDGS Sbjct: 190 IARSALATDEMLPAVAQGAIGIERREDDHATAALLEAIHDPETARQLAAERAFLAALDGS 249 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C++ IAG A +G TL G +L DG + R+ D +GR+ + + Sbjct: 250 CETPIAGLADLEGGTLRLRGEILRPDGSEALKDDRSAPVEDGAKLGREMGAALLAQAGDG 309 Query: 304 VFNF 307 F+F Sbjct: 310 FFDF 313 >gi|296136292|ref|YP_003643534.1| porphobilinogen deaminase [Thiomonas intermedia K12] gi|294340528|emb|CAZ88912.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Thiomonas sp. 3As] gi|295796414|gb|ADG31204.1| porphobilinogen deaminase [Thiomonas intermedia K12] Length = 317 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 102/303 (33%), Positives = 160/303 (52%), Gaps = 5/303 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A R L ++ P ++ I ++T+GD+I +++L +IGGKGLF Sbjct: 11 LVIATRESRLALWQAEHVRDLLKGLY--PQCDVRIFGMTTQGDQILDKSLAKIGGKGLFV 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E + G D AVHS KD+P L G ++A + RED RD ++S +L DL + Sbjct: 69 KELEVAMEQGHADLAVHSLKDVPMVLPTGFALTAVMEREDPRDAWVSPHYANLADLPAGA 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR++ L + V RG ++TRL KL+ + ILLA AG+KRL + + Sbjct: 129 VVGTSSLRRESQLRARYPHLKVQALRGNLDTRLRKLDEGQYAGILLAAAGLKRLGLGERV 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ ED P+ GQ A+ IE + P + + +NH T + ERA L GSC Sbjct: 189 RAVIEPEDMLPAVGQAALGIEIRADRPDLAQALAALNHPPTALCTHAERAVSRGLGGSCT 248 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIRFISNK 302 + + +A +G ++ ++ DG + G D A +G+ A+ +R Sbjct: 249 TPMGAYATLEGEAMHLRAVLGLPDGSQALHAQQRGRVTDLAQAEALGQQVARQLREQGAD 308 Query: 303 NVF 305 + Sbjct: 309 ALL 311 >gi|323177814|gb|EFZ63398.1| porphobilinogen deaminase [Escherichia coli 1180] Length = 279 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 97/268 (36%), Positives = 148/268 (55%) Query: 38 IVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQI 97 + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +GL + Sbjct: 2 VELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGL 61 Query: 98 SAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETR 157 RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG + TR Sbjct: 62 VTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTR 121 Query: 158 LNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217 L+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + +EL Sbjct: 122 LSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTRTREL 181 Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277 + +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 182 LAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGE 241 Query: 278 RNGNRCDAINIGRDAAQYIRFISNKNVF 305 R G +A +G A+ + + + Sbjct: 242 RRGAPQNAEQMGISLAEELLNNGAREIL 269 >gi|21674248|ref|NP_662313.1| porphobilinogen deaminase [Chlorobium tepidum TLS] gi|25453021|sp|Q8KCJ4|HEM3_CHLTE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|21647416|gb|AAM72655.1| porphobilinogen deaminase [Chlorobium tepidum TLS] Length = 312 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 116/306 (37%), Positives = 170/306 (55%), Gaps = 5/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK IGTR SPLAL A T++ L P NI + + T GD + + L++IG G Sbjct: 2 KKELIIGTRSSPLALWQAEFTKAEL--SRHFPELNITLKLVKTTGDVLLDSPLSKIGDMG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT++IEK L++ EID AVHS KD+PT +GL IS++ RED RDV IS + + LKDL Sbjct: 60 LFTKDIEKHLLAKEIDLAVHSLKDVPTGTPEGLVISSFTKREDTRDVIISKSGKGLKDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ + TSSLRR + LL R D+ ++D RG + TR K ++ + A++LAYAG+ RL+ Sbjct: 120 PNARMATSSLRRMSQLLSMRPDLQILDIRGNLNTRFKKFDDGEFDAMMLAYAGVYRLEFS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EIL + P+ GQGA+ IET ++ + E+V+V+N +T ERA L L G Sbjct: 180 DRISEILPHDVMLPAVGQGALGIETRTDDAETIEIVRVMNDSNTEICCRAERALLRHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFI 299 C+ I + TL V + DGK +A +G + A+ + + Sbjct: 240 GCQIPIGCYGSYISGTLKLLAFVGSVDGKTALRNELTKPVNTPEEAEAVGIELAEVLLSM 299 Query: 300 SNKNVF 305 + + Sbjct: 300 GAEKIL 305 >gi|33593520|ref|NP_881164.1| porphobilinogen deaminase [Bordetella pertussis Tohama I] gi|39931430|sp|Q7VVU9|HEM3_BORPE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|33572876|emb|CAE42812.1| porphobilinogen deaminase [Bordetella pertussis Tohama I] gi|332382928|gb|AEE67775.1| porphobilinogen deaminase [Bordetella pertussis CS] Length = 314 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 109/300 (36%), Positives = 158/300 (52%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A R L + P ++ ++ L+T+GD+I +RTL+++GGKGLF Sbjct: 7 LTIATRASRLALWQAEHVRDLLRA--RYPACSVELLTLTTRGDQILDRTLSKVGGKGLFV 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P L ++S L R D RD F+S+ SL DL + Sbjct: 65 KELETALLDGRADLAVHSLKDVPVDLHAPFELSCVLERADPRDAFVSNDYGSLADLPPGA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR++ + + V RG ++TRL KL+N AI+LA AG++RL I Sbjct: 125 AVGTSSLRRESQIRARYPHLVVKPLRGNLDTRLGKLDNGDYAAIVLAAAGLERLGLAARI 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + +L +D P+ GQGA+ IE + ++ + T V ERA L GSC+ Sbjct: 185 RALLEPDDSLPAAGQGALGIEILQGRADVRAMLAPLGDAATLACVTAERAVSRMLGGSCQ 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A +A G L +V A DG+ R G R A IG AA+ + + Sbjct: 245 VPLAAYARIDGDELALRALVAAPDGRRIVRAERRGPRDQAQAIGESAARDLLADGADAIL 304 >gi|193212401|ref|YP_001998354.1| porphobilinogen deaminase [Chlorobaculum parvum NCIB 8327] gi|209572771|sp|P28464|HEM3_CHLP8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|193085878|gb|ACF11154.1| porphobilinogen deaminase [Chlorobaculum parvum NCIB 8327] Length = 312 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 117/306 (38%), Positives = 171/306 (55%), Gaps = 5/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK IGTR SPLAL A T++ L + P NI + + T GD + + L++IG G Sbjct: 2 KKEIIIGTRSSPLALWQAEFTKAELSK--RFPDMNITLKLVKTTGDVLLDSPLSKIGDMG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT++IEK L++GEID AVHS KD+PT +GL I+++ RED RDV IS + + L DL Sbjct: 60 LFTKDIEKHLLAGEIDLAVHSLKDVPTGTPEGLVITSFTEREDTRDVIISKSGKGLMDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ + TSSLRR + LL R D+ ++D RG + TR K + A++LAYAG+ RL+ Sbjct: 120 QNAKMATSSLRRMSQLLSLRPDLEIMDIRGNLNTRFKKFDEGDFDAMMLAYAGVYRLEFS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EIL E P+ GQGA+ IET ++ + +E+V+V+N ++T ERA L L G Sbjct: 180 DRITEILPHETMLPAVGQGALGIETRTDDAETREIVRVLNDDNTEMCCRAERALLRHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIRFI 299 C+ I F TL V + DGK +A +G + A+ + + Sbjct: 240 GCQIPIGSFGSYIDGTLKLLAFVGSVDGKTGLRNEVTKAVKTPEEAEAVGIELAEILLSM 299 Query: 300 SNKNVF 305 + + Sbjct: 300 GAEKIL 305 >gi|294789041|ref|ZP_06754281.1| hydroxymethylbilane synthase [Simonsiella muelleri ATCC 29453] gi|294483143|gb|EFG30830.1| hydroxymethylbilane synthase [Simonsiella muelleri ATCC 29453] Length = 311 Score = 356 bits (914), Expect = 2e-96, Method: Composition-based stats. Identities = 100/302 (33%), Positives = 160/302 (52%), Gaps = 3/302 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A ++ L ++ P ++ I+ ++T+GD+I ++TL++IGGKGLF Sbjct: 7 LVIASRESALAMWQAQHIQAQLQQLY--PQCDVSILGMTTQGDQILDKTLSKIGGKGLFV 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P L +G + A R + D F+S+ L+DL + Sbjct: 65 KELEVALQDGRADLAVHSIKDVPMVLPEGFALVAISERANPFDAFVSNHYTRLEDLPKGA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+A L +++ RG ++TRL KL+N AI+LA AG++RL+ I Sbjct: 125 IVGTSSLRREAQLRARFPHLTIQPLRGNVQTRLAKLDNGDYDAIILAAAGLERLELHNRI 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + +L+ D P+ GQGA+ IE + + +NH T V ERA L GSC+ Sbjct: 185 RHVLSPADSLPAAGQGALGIEIAAHRTDLIATLLPLNHAKTAACVTAERALARALGGSCQ 244 Query: 246 SAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 +A + L +G+V DG + + A +GR A+ + ++ Sbjct: 245 VPLAAYCTADDAGLLTLHGLVAHPDGSVVLNANAQAPAQYADALGRAVAKKLADDGAMDI 304 Query: 305 FN 306 Sbjct: 305 IQ 306 >gi|224008054|ref|XP_002292986.1| porphobilinogen deaminase [Thalassiosira pseudonana CCMP1335] gi|220971112|gb|EED89447.1| porphobilinogen deaminase [Thalassiosira pseudonana CCMP1335] Length = 330 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 123/307 (40%), Positives = 181/307 (58%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKG 62 P RIGTR SPLALA A+ETR L++ I I + T+GD I +++L E+GGKG Sbjct: 9 PLRIGTRGSPLALAQAYETRRRLIENFPELEAEGAIEICVMKTQGDMILDKSLMELGGKG 68 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSLKD 120 LFT+E++ L+ E+D VHS KD+PT L +G + LPRED D FI+ + + D Sbjct: 69 LFTKELDTALLGDEVDICVHSMKDVPTWLPEGTVLPCNLPREDTNDAFITANGDIKRIAD 128 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +SVIGT+SLRR+A +L + ++FRG ++TRL KL++ A LLA AG+KR+ Sbjct: 129 LPDNSVIGTASLRRQAQILAQNPTLKCVNFRGNVQTRLRKLDDGVVDATLLAIAGLKRMD 188 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + IL ++ P+ QGAI I+ ++ ++ + + +N DT VNCERAFL L Sbjct: 189 MDDCATAILEWDEMLPAVAQGAIGIQCRSDDTRSLKYIDALNCMDTHVCVNCERAFLEAL 248 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DG+CK+ IAG A + F G++ DG + +E G DA+ IGR A + ++ + Sbjct: 249 DGNCKTPIAGQARIVDGKIVFKGLIAMPDGSLKYETEATGEIADAVEIGRKAGEELKAQA 308 Query: 301 NKNVFNF 307 + F Sbjct: 309 GEKFFEM 315 >gi|297810933|ref|XP_002873350.1| hypothetical protein ARALYDRAFT_908776 [Arabidopsis lyrata subsp. lyrata] gi|297319187|gb|EFH49609.1| hypothetical protein ARALYDRAFT_908776 [Arabidopsis lyrata subsp. lyrata] Length = 382 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 134/308 (43%), Positives = 186/308 (60%), Gaps = 6/308 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 RIGTR SPLALA A+ETR L H + I I + T GD+I ++ L +IGGKG Sbjct: 74 IIRIGTRGSPLALAQAYETREKLKSKHPELVEDGAIHIEIIKTTGDKILSQPLADIGGKG 133 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+EI++ LI+G ID AVHS KD+PT L + + LPRED+RD FI TA SL +L Sbjct: 134 LFTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFICLTAASLAELP 193 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SV+GT+SLRRK+ +L + V + FRG ++TRL+KL K A LLA AG+KRL Sbjct: 194 AGSVVGTASLRRKSQILHKYPALRVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSM 253 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + IL++++ P+ QGAI I ++ K + +NHE+T +++CERAFL LD Sbjct: 254 TENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLD 313 Query: 242 GSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRF 298 GSC++ IAG+ A + F G+V + DG E SR G D + +G+DA Q + Sbjct: 314 GSCRTPIAGYAAKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLS 373 Query: 299 ISNKNVFN 306 + F Sbjct: 374 RAGPGFFG 381 >gi|15241573|ref|NP_196445.1| HEMC (HYDROXYMETHYLBILANE SYNTHASE); hydroxymethylbilane synthase [Arabidopsis thaliana] gi|2495179|sp|Q43316|HEM3_ARATH RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase; Flags: Precursor gi|16930521|gb|AAL31946.1|AF419614_1 AT5g08280/F8L15_10 [Arabidopsis thaliana] gi|313150|emb|CAA51941.1| hydroxymethylbilane synthase [Arabidopsis thaliana] gi|313838|emb|CAA52061.1| hydroxymethylbilane synthase [Arabidopsis thaliana] gi|10178270|emb|CAC08328.1| hydroxymethylbilane synthase [Arabidopsis thaliana] gi|17979402|gb|AAL49926.1| putative hydroxymethylbilane synthase [Arabidopsis thaliana] gi|21689853|gb|AAM67570.1| putative hydroxymethylbilane synthase [Arabidopsis thaliana] gi|332003894|gb|AED91277.1| Porphobilinogen deaminase [Arabidopsis thaliana] Length = 382 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 133/308 (43%), Positives = 186/308 (60%), Gaps = 6/308 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 RIGTR SPLALA A+ETR L H + I I + T GD+I ++ L +IGGKG Sbjct: 74 IIRIGTRGSPLALAQAYETREKLKKKHPELVEDGAIHIEIIKTTGDKILSQPLADIGGKG 133 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+EI++ LI+G ID AVHS KD+PT L + + LPRED+RD FI TA +L +L Sbjct: 134 LFTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFICLTAATLAELP 193 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SV+GT+SLRRK+ +L + V + FRG ++TRL+KL K A LLA AG+KRL Sbjct: 194 AGSVVGTASLRRKSQILHKYPALHVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSM 253 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + IL++++ P+ QGAI I ++ K + +NHE+T +++CERAFL LD Sbjct: 254 TENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLD 313 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRF 298 GSC++ IAG+A + F G+V + DG E SR G D + +G+DA Q + Sbjct: 314 GSCRTPIAGYASKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLS 373 Query: 299 ISNKNVFN 306 + F Sbjct: 374 RAGPGFFG 381 >gi|190575960|ref|YP_001973805.1| porphobilinogen deaminase [Stenotrophomonas maltophilia K279a] gi|229846305|sp|B2FI06|HEM3_STRMK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|190013882|emb|CAQ47520.1| putative porphobilinogen deaminase [Stenotrophomonas maltophilia K279a] Length = 303 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 158/303 (52%), Gaps = 2/303 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL + L H P ++ ++P+ST+GD + +R+L IGGKGLF Sbjct: 3 TVRIATRKSPLALWQSEHVADRLRQAH--PGLHVELVPMSTRGDEVLDRSLAAIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ GE DCAVHS KD+P +L + A L R D D F+S+ SL L + Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDPPFALPAMLTRHDPADGFVSNLYASLDALPIG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A L R D+ ++D RG + TRL KL+N AI+LA AG++RL + Sbjct: 121 ARVGTSSLRRQAQLRALRPDLELLDLRGNVNTRLAKLDNGGYDAIVLAVAGLERLGLGER 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L + P+P QGA+ +E N + L ++ T V ERA L GSC Sbjct: 181 IVARLQPPQWLPAPAQGAVAVECDGGNARLMALFAPLDDAATRACVEAERAMNRALHGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 +A A +G L+ G+V ++ G D +G+ A+ + + Sbjct: 241 HVPVAAIAQWQGDDLHLQGLVGSASDGRAVRAEAVGPANDPEGLGQRVAKLLLDDGAGEL 300 Query: 305 FNF 307 N Sbjct: 301 LNV 303 >gi|89056336|ref|YP_511787.1| porphobilinogen deaminase [Jannaschia sp. CCS1] gi|88865885|gb|ABD56762.1| porphobilinogen deaminase [Jannaschia sp. CCS1] Length = 318 Score = 355 bits (912), Expect = 4e-96, Method: Composition-based stats. Identities = 128/307 (41%), Positives = 181/307 (58%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P RIGTR SPLALA A ETR+ LM +P I+ + T GD + L E+GG Sbjct: 11 PLRIGTRGSPLALAQARETRARLMAAWDLPEDAFEIVVIKTTGDDRSLIDADVALKELGG 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ +++ ID AVHS KDMPT GL + YLPRED+RD F+S L Sbjct: 71 KGLFTKEIEEDMLTSSIDIAVHSMKDMPTVQPDGLMLDCYLPREDVRDAFVSVNHDGLHA 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++G+SSLRR+A L R D++V++FRG ++TR+ KL A A LA AG++RL Sbjct: 131 LPEGAIVGSSSLRRRAQLFARRPDLNVVEFRGNVQTRMKKLGGGVADATFLAMAGLRRLG 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+V+K + +ED P+ QGAI IE V++ +A +++ I++ +T + ER+FL L Sbjct: 191 MEEVVKSAIEVEDMLPAVAQGAIGIERRVSDTRAGDMLAAIHNTETGQRLAAERSFLKGL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IA A G TL G +L DG R D +G D A+ +R + Sbjct: 251 DGSCQTPIAALAELDGGTLRLRGEILRPDGSEVLTDDRTAPIEDGAALGADMARDLRARA 310 Query: 301 NKNVFNF 307 F++ Sbjct: 311 GDGFFDW 317 >gi|113868875|ref|YP_727364.1| porphobilinogen deaminase [Ralstonia eutropha H16] gi|113527651|emb|CAJ93996.1| porphobilinogen deaminase [Ralstonia eutropha H16] Length = 337 Score = 355 bits (912), Expect = 4e-96, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 170/305 (55%), Gaps = 5/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + I +R S LAL A R++L + P ++ I+ ++T+GD+I +RTL+++GGKGL Sbjct: 19 QKLVIASRESRLALWQAEHVRAALQQYY--PACDVSILGMTTRGDQILDRTLSKVGGKGL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E + G D AVHS KD+P +L +G ++A + RED RD +S SL ++ Sbjct: 77 FVKELEFAMDEGRADLAVHSLKDVPMELPEGFALTAVMEREDPRDALVSSAYASLDEMPA 136 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR+A L + + RG ++TRL KL+ + AI+LA AG+KRL + Sbjct: 137 GTVVGTSSLRREAALRSRYPQLVIKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGE 196 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ ++ I+ P+ GQGA+ IE N P+ + + +NH+ T +V+ ERA L GS Sbjct: 197 RIRALIPIDVSLPAAGQGALGIEILANRPELAQWLAPLNHQPTALAVSAERAVSRMLGGS 256 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIRFIS 300 C+ +A A +G L V DG + +G D A +G+ A+ + Sbjct: 257 CQVPLAAHARWEGDQLKLDAFVALPDGTRAIRAAASGPAVDLAAAEALGQACARDLLAQG 316 Query: 301 NKNVF 305 + + Sbjct: 317 AEAIL 321 >gi|242373962|ref|ZP_04819536.1| hydroxymethylbilane synthase [Staphylococcus epidermidis M23864:W1] gi|242348316|gb|EES39918.1| hydroxymethylbilane synthase [Staphylococcus epidermidis M23864:W1] Length = 308 Score = 355 bits (912), Expect = 4e-96, Method: Composition-based stats. Identities = 100/304 (32%), Positives = 176/304 (57%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L ++ P +I I + TKGD+I ++ L+++GGKGL Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDELKEIE--PDLDIEIKEIVTKGDKIVDKQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L + +ID A+HS KD+P+ + +GL + RE D +IS L +L Sbjct: 60 FVKEIQNELFNKDIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHTPLSELPE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 S++GTSSLRR A +L + + RG I+TRLNKL AI+LA AG++R+ + Sbjct: 120 GSIVGTSSLRRGAQILSKYPHLEIKWIRGNIDTRLNKLETEDYDAIILAAAGLRRMGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ L+ + P+ GQGA+ IE ++ + +L+K +++ + V ER FL+E+DG Sbjct: 180 DIVTTYLDKDILLPAIGQGALGIECRSDDEELLDLLKKVHNHEVAQCVTAERTFLSEMDG 239 Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ I G+A G+ + F G+++ DGK +E + G+ + + +G++ ++ ++ Sbjct: 240 SCQVPIGGYATIDGNSQIEFTGLIMTPDGKERYEHTARGH--NPVELGQEVSRVLKEQGA 297 Query: 302 KNVF 305 + Sbjct: 298 YEII 301 >gi|119503707|ref|ZP_01625789.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2080] gi|119460215|gb|EAW41308.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2080] Length = 302 Score = 355 bits (912), Expect = 5e-96, Method: Composition-based stats. Identities = 108/306 (35%), Positives = 162/306 (52%), Gaps = 8/306 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I TR SPLAL A L ++ P + ++ ++++GD++ ++ L ++GG Sbjct: 1 MSK--LVIATRESPLALWQANYVADRLRALY--PELMVELLGMTSRGDQLLDKPLYKVGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P L GL + RED RD + +A L + Sbjct: 57 KGLFVKELETALLDGRADIAVHSMKDVPMALPPGLTLGVICEREDPRDALVGISA--LSE 114 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + GTSSLRR + R R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 115 LEQGARFGTSSLRRACQIRRVRPDLEIGFLRGNVNTRLAKLDAGEFDAIILATAGLVRLG 174 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I + E P+ GQGA+ IE ++ + EL+ +N DT + V ERA + L Sbjct: 175 FESRIGARIEPEVSLPAGGQGAVGIEYRSDDDRVAELLAPLNDADTAECVTAERAVVRVL 234 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DG C IA +A +G+ L+ +V + DG+ E G +A +G++ AQ + Sbjct: 235 DGGCDVPIASYAVKEGNELWLRALVGSVDGRSVLEAQSRG--ANAEELGQEVAQALLDGG 292 Query: 301 NKNVFN 306 V Sbjct: 293 AAAVLE 298 >gi|163745168|ref|ZP_02152528.1| porphobilinogen deaminase [Oceanibulbus indolifex HEL-45] gi|161381986|gb|EDQ06395.1| porphobilinogen deaminase [Oceanibulbus indolifex HEL-45] Length = 315 Score = 355 bits (911), Expect = 5e-96, Method: Composition-based stats. Identities = 132/304 (43%), Positives = 179/304 (58%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P IGTR S LALA A E R L +P I+ + T GD+I +R L EIGGKGL Sbjct: 10 RPLNIGTRGSLLALAQANEVRDRLAAAFDLPFEAFTIVVIKTTGDKIIDRPLKEIGGKGL 69 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT EIE L+ G ID AVHS KDMPT GL I YLPRED+RD FIS +S+ DL Sbjct: 70 FTREIEAALLDGSIDIAVHSMKDMPTLQPGGLVIDTYLPREDMRDAFISPHLKSIADLPE 129 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR+A + R D+ V++FRG ++TRL KL + A A LA AG+ RLK ++ Sbjct: 130 GAVVGTSSLRRRAQVKLRRPDLEVVEFRGNLQTRLKKLEDGVAEATFLAMAGLNRLKMDE 189 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V K ++ +D P+ QGAI IE +++ +A +++ I+ T + + ERAFLA LDGS Sbjct: 190 VPKAAVHTDDMLPAIAQGAIGIERRMDDTRAADMLAAIHDRATGEQLAAERAFLATLDGS 249 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C++ IAG A G+ + G VL DG D GR+ A+ + + Sbjct: 250 CETPIAGLAELNGTNMRLRGQVLRPDGSDAIGDDVTCTISDGAEAGREMARKLLAEAGPG 309 Query: 304 VFNF 307 F++ Sbjct: 310 FFDW 313 >gi|21592624|gb|AAM64573.1| hydroxymethylbilane synthase [Arabidopsis thaliana] Length = 382 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 132/308 (42%), Positives = 185/308 (60%), Gaps = 6/308 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 RIGTR SPLALA A+ETR L H + I I + T GD+I ++ L +IGGKG Sbjct: 74 IIRIGTRGSPLALAQAYETREKLKKKHPELVEDGAIHIEIIKTTGDKILSQPLADIGGKG 133 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+EI++ LI+G ID AVHS K +PT L + + LPRED+RD FI TA +L +L Sbjct: 134 LFTKEIDEALINGHIDIAVHSMKYVPTYLPEKTILPCNLPREDVRDAFICLTAATLAELP 193 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SV+GT+SLRRK+ +L + V + FRG ++TRL+KL K A LLA AG+KRL Sbjct: 194 AGSVVGTASLRRKSQILHKYPALHVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSM 253 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + IL++++ P+ QGAI I ++ K + +NHE+T +++CERAFL LD Sbjct: 254 TENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLD 313 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRF 298 GSC++ IAG+A + F G+V + DG E SR G D + +G+DA Q + Sbjct: 314 GSCRTPIAGYASKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLS 373 Query: 299 ISNKNVFN 306 + F Sbjct: 374 RAGPGFFG 381 >gi|229918358|ref|YP_002887004.1| porphobilinogen deaminase [Exiguobacterium sp. AT1b] gi|259647797|sp|C4L4J6|HEM3_EXISA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|229469787|gb|ACQ71559.1| porphobilinogen deaminase [Exiguobacterium sp. AT1b] Length = 305 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 97/303 (32%), Positives = 165/303 (54%), Gaps = 5/303 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LA+ L + I + TKGD+I + L+++GGKGL Sbjct: 2 RKIIVGSRRSQLAMTQTKWVIEQLKQAGA--TNEFEIKEIVTKGDQIVDVQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+++++ G+ID AVHS KD+P +L + L IS R D RDV I + + L Sbjct: 60 FVKEIQQQMLDGDIDFAVHSMKDVPAELPEELYISCMPKRVDARDVLICENGYTFETLPK 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S++GTSSLRR A +L R D+ + RG I+TRL KL++ +AILLA AG++R+ Sbjct: 120 GSIVGTSSLRRGAQILAARPDLEIQWIRGNIDTRLKKLDSENYNAILLAKAGLERMGWTD 179 Query: 184 V-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 E L+ + P+ GQG + IE+ ++ + ++++++ + T + ER FL ++G Sbjct: 180 RVDFEALDPDVMVPAVGQGVLAIESRKDDAEVTTVLQLLHDDVTAKAATAERTFLKAIEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC + G+A G + G++ + DGK V++ D + +G+ A+ + + Sbjct: 240 SCHVPVGGYATVNGDDVTLTGLIASVDGKEVLRVTKT--STDGVALGQAVAEELLGRGGR 297 Query: 303 NVF 305 + Sbjct: 298 EIL 300 >gi|87117998|gb|ABD20306.1| HemC [Shigella dysenteriae] gi|87118030|gb|ABD20322.1| HemC [Shigella flexneri] gi|87118032|gb|ABD20323.1| HemC [Shigella flexneri] Length = 272 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 99/267 (37%), Positives = 147/267 (55%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTR 185 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300 R G DA +G A+ + Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272 >gi|119386338|ref|YP_917393.1| porphobilinogen deaminase [Paracoccus denitrificans PD1222] gi|166217779|sp|A1B853|HEM3_PARDP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|119376933|gb|ABL71697.1| porphobilinogen deaminase [Paracoccus denitrificans PD1222] Length = 313 Score = 354 bits (910), Expect = 7e-96, Method: Composition-based stats. Identities = 130/305 (42%), Positives = 179/305 (58%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + P RIGTR S LALA A ETR LM H + I+ + T GDR+ +R L EIGGKG Sbjct: 8 QNPIRIGTRGSALALAQAHETRDRLMAAHGLAADAFRIVVIKTTGDRVLDRPLKEIGGKG 67 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT EIE L++ EID AVHS KDMPT +GL I YLPRED+RD F+S ++ +L Sbjct: 68 LFTREIEDALLAHEIDIAVHSMKDMPTIQPEGLVIDCYLPREDVRDAFVSAQFAAISELP 127 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+G+SSLRR+A L R D+ +++FRG ++TRL KL + A A LA AG+ RL Sbjct: 128 QGAVVGSSSLRRRAQLAARRPDLKLVEFRGNVQTRLKKLEDGVAVATFLAMAGLTRLGML 187 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V + + ++ P+ QG I +E ++ + L+ I+ D+ V ERAFLA LDG Sbjct: 188 HVARGAVEPDEMLPAVAQGCIGVERRADDARTASLLAAISDRDSALRVTAERAFLARLDG 247 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC++ IAG A +G L G +L DG R G D +G D A+ +R + Sbjct: 248 SCQTPIAGLAELQGDRLRLRGEILRPDGSEVIAAERVGPAADGAAMGTDLAEELRGRAPA 307 Query: 303 NVFNF 307 + F++ Sbjct: 308 DFFDW 312 >gi|56476047|ref|YP_157636.1| porphobilinogen deaminase [Aromatoleum aromaticum EbN1] gi|56312090|emb|CAI06735.1| Porphobilinogen deaminase [Aromatoleum aromaticum EbN1] Length = 314 Score = 354 bits (910), Expect = 7e-96, Method: Composition-based stats. Identities = 101/300 (33%), Positives = 153/300 (51%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A ++ L ++ P + ++ ++T+GD+I +R L ++GGKGLF Sbjct: 13 LVIATRESRLALWQAEHVKARLEALY--PGCRVELLGMTTRGDQILDRPLAKVGGKGLFV 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P +L + + RE D F+S SL D+ + Sbjct: 71 KELEAALLEERADIAVHSMKDVPMQLAEPFALPCISAREVPLDAFVSPRYASLADMPPGT 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR++ L ++V RG ++TRL KL+ + AI+LA AG++RL I Sbjct: 131 VVGTSSLRRESQLHAQFPFLAVTSLRGNLDTRLRKLDEGQYDAIILAAAGLRRLGLADRI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE + +N DT V ERA L GSC+ Sbjct: 191 RAELPSEVSLPAAGQGALGIECLAKRTDIAAWLAPLNDADTSACVRAERAVARALAGSCE 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + +A + L+ G V DG R G+ DA +G A +R +++ Sbjct: 251 VPLGAYAEIRAGRLWLRGFVALPDGSRMVRAEREGDAADAEGLGLALADDLRAQGAEDIL 310 >gi|87117964|gb|ABD20289.1| HemC [Shigella boydii] gi|87117966|gb|ABD20290.1| HemC [Shigella boydii] gi|87117982|gb|ABD20298.1| HemC [Shigella boydii] gi|87117986|gb|ABD20300.1| HemC [Shigella boydii] gi|87117990|gb|ABD20302.1| HemC [Shigella boydii] gi|87117994|gb|ABD20304.1| HemC [Shigella boydii] gi|87118012|gb|ABD20313.1| HemC [Shigella dysenteriae] Length = 272 Score = 354 bits (910), Expect = 7e-96, Method: Composition-based stats. Identities = 99/267 (37%), Positives = 147/267 (55%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 185 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300 R G DA +G A+ + Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272 >gi|168034136|ref|XP_001769569.1| predicted protein [Physcomitrella patens subsp. patens] gi|162679111|gb|EDQ65562.1| predicted protein [Physcomitrella patens subsp. patens] Length = 361 Score = 354 bits (910), Expect = 8e-96, Method: Composition-based stats. Identities = 135/306 (44%), Positives = 186/306 (60%), Gaps = 4/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A++TR L H + I+ + T GD+I ++ L +IGGKGL Sbjct: 56 VRIGTRGSPLALAQAYQTRDKLKAAHPELAEEGALDIVIIKTTGDKILSQPLADIGGKGL 115 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L++G+ID AVHS KD+PT L +G + LPRED+RD FI SL +L Sbjct: 116 FTKEIDDALLNGDIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICPKYSSLAELPE 175 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+G++SLRR++ LL + V++FRG ++TRL KLN A LLA AG+KRL + Sbjct: 176 GSVVGSASLRRQSQLLHRYPHLQVVNFRGNVQTRLRKLNEGVCAATLLALAGLKRLDMTE 235 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I IL +D P+ QGAI I + K +E + +NHEDT +++CERAFLA+LDGS Sbjct: 236 HITAILETDDMLPAIAQGAIGIACRTGDTKMEEYLASLNHEDTRLAISCERAFLAKLDGS 295 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFISN 301 C++ IAG A F G+V +DGK E SR G + D I + +DA Q + + Sbjct: 296 CRTPIAGLAQRTEDGCLFRGLVATTDGKQVLETSRTGSFSYDDMIALAQDAGQELISRAG 355 Query: 302 KNVFNF 307 F + Sbjct: 356 PGFFQW 361 >gi|317402904|gb|EFV83446.1| HemC protein [Achromobacter xylosoxidans C54] Length = 314 Score = 354 bits (910), Expect = 8e-96, Method: Composition-based stats. Identities = 101/301 (33%), Positives = 153/301 (50%), Gaps = 2/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A R L ++ P + ++ L+T+GD+I +RTL+++GGKGLF Sbjct: 7 LVIATRASRLALWQAEHVRDRLRTLY--PACAVELLTLTTRGDQILDRTLSKVGGKGLFV 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVH KDMP + ++ A L R D RD F+S+ +L DL + Sbjct: 65 KELETALLDGRADLAVHCLKDMPVDMQAPFELCAVLDRADPRDAFVSNRYATLADLPAGA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR++ + + V RG ++TRL KL+ + AI+LA AG+ RL I Sbjct: 125 VVGTSSLRRESQIRARYPQLLVKPLRGNLDTRLGKLDRGEYDAIVLAAAGLNRLGLTDRI 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +L+ + P+ GQGA+ IE + + + +N ERA L GSC+ Sbjct: 185 SSLLDPAESLPAAGQGALTIEIRDDRDDMRAWLAPLNDAGATSISLAERAVSRRLGGSCQ 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A +A TL +V + DG +G A IG A + + + Sbjct: 245 VPLAAYAEIADDTLTLRALVASPDGTRMLRAHGSGPVAQAQAIGEAVAAELFDAGAQAIL 304 Query: 306 N 306 + Sbjct: 305 D 305 >gi|145588841|ref|YP_001155438.1| porphobilinogen deaminase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047247|gb|ABP33874.1| porphobilinogen deaminase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 325 Score = 354 bits (910), Expect = 8e-96, Method: Composition-based stats. Identities = 102/303 (33%), Positives = 163/303 (53%), Gaps = 5/303 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A R L ++ P ++ I+ ++T+GD+I +R L+++GGKGLF Sbjct: 20 LVIASRESRLAMWQAEHVRDCLKSLY--PQCDVQILGMTTRGDQILDRALSKVGGKGLFV 77 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G AVHS KD+P + +G ++ + RED RD F+S+ SL++L + Sbjct: 78 KELETALEDGRAHLAVHSLKDVPMVMPEGFDLACVMAREDARDAFVSNDYASLEELPKGA 137 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+A+L + V RG ++TR+ KL+ + AI+LA AG+KRL E I Sbjct: 138 VVGTSSLRREAVLRAKFPHLEVHPLRGNLDTRMGKLDRGEYQAIILAAAGLKRLGLESRI 197 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L + + P+ GQGA+ IET +P + + +N T +V+ ER +L GSC+ Sbjct: 198 RAYLPYDPYTPAAGQGALGIETLSKHPSIKHWLAPLNDLPTLLAVSAERMVSRQLGGSCE 257 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNK 302 +A A + + V + DGK G +A +G AQ + Sbjct: 258 VPLAAHAVWDNNQMNIRSFVASVDGKAICLADGVGQVHTIEEAEALGLAVAQDLLAQGAA 317 Query: 303 NVF 305 ++ Sbjct: 318 DLI 320 >gi|223044144|ref|ZP_03614183.1| porphobilinogen deaminase [Staphylococcus capitis SK14] gi|222442538|gb|EEE48644.1| porphobilinogen deaminase [Staphylococcus capitis SK14] Length = 309 Score = 354 bits (910), Expect = 8e-96, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 173/304 (56%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L V P +I I + TKGD+I ++ L+++GGKGL Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDKLKKV--DPDLDIEIKEIVTKGDQIVDKQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L + EID A+HS KD+P+ + +GL + RE D +IS L +L Sbjct: 60 FVKEIQNELFNKEIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHTPLSELTE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 S++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ + Sbjct: 120 GSIVGTSSLRRGAQILSKYPHLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ L+ + P+ GQGA+ IE ++ + EL+K ++++D V ER FL+E+DG Sbjct: 180 DIVTTYLDKDVLLPAIGQGALGIECRSDDKELLELLKKVHNQDVAQCVTAERTFLSEMDG 239 Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ I G+A G + F G+++ DGK +E + G D + +G++ ++ ++ Sbjct: 240 SCQVPIGGYATIDGDKQIEFTGLIMTPDGKERYEHTAKG--LDPVELGQEVSRVLKEQGA 297 Query: 302 KNVF 305 + Sbjct: 298 YEII 301 >gi|187478790|ref|YP_786814.1| porphobilinogen deaminase [Bordetella avium 197N] gi|115423376|emb|CAJ49910.1| porphobilinogen deaminase [Bordetella avium 197N] Length = 314 Score = 354 bits (909), Expect = 9e-96, Method: Composition-based stats. Identities = 105/300 (35%), Positives = 159/300 (53%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A R L D++ P + ++ L+T+GD+I +R+L+++GGKGLF Sbjct: 7 LVIATRASRLALWQAEHVRDRLRDLY--PACAVELLTLTTRGDQILDRSLSKVGGKGLFV 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P + +S L R D RD F+S SL L + + Sbjct: 65 KELEHALLDGRADLAVHSLKDVPVDIQAPFALSTVLERADPRDAFVSARYASLDALPVGA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+A + R D+ V RG ++TRL KL+ + A++LA AG++R+ I Sbjct: 125 VVGTSSLRREAQIRAARPDLVVRPLRGNLDTRLGKLDRGEYDAVVLAAAGLERIGYGDRI 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L P+ GQGA+ IE + + + ++ T V+ ERA L GSC+ Sbjct: 185 RARLAPAQSLPAAGQGALGIEIRDDRDDMRAWLAPLSDASTTACVSAERAVSRALGGSCQ 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 I +A G TL +V + DG+ SR G +A ++G A + + Sbjct: 245 VPIGAYAELHGQTLRIDALVASPDGRRILRASRLGPVAEADSLGMAVAHDLLAQGGDAIL 304 >gi|126740632|ref|ZP_01756319.1| porphobilinogen deaminase [Roseobacter sp. SK209-2-6] gi|126718433|gb|EBA15148.1| porphobilinogen deaminase [Roseobacter sp. SK209-2-6] Length = 319 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 131/307 (42%), Positives = 180/307 (58%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A+ETR+ L +P I+ + T GD ++ L E+GG Sbjct: 11 PLKIGTRGSPLALAQAYETRARLAKAFDLPQEAFEIVVIKTTGDNQALIAADKPLKELGG 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+SG ID AVHS KDMP +GL + YLPRED+RD F+S L+D Sbjct: 71 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVLQPEGLLLDCYLPREDVRDAFVSPKFSRLQD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LA +V+GTSSLRR+A L+ R D+ V++FRG ++TRL KL + A LA AG+ RL Sbjct: 131 LAAGAVVGTSSLRRRAQLMNRRPDLKVVEFRGNVQTRLKKLEDGVAECTFLAMAGLNRLA 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E V + D P+ QGAI IE ++ + +++ I+ + T + ERAFLA L Sbjct: 191 MESVPATAIETTDMLPAVAQGAIGIERRSDDSRVAAMLEAIHDKATGQRLAAERAFLAAL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A G TL G VL DG ++ D +GRD A + + Sbjct: 251 DGSCETPIAGLAELDGGTLRMRGEVLRPDGSEAIAEDQSCAIEDGAALGRDMAAKLLDQA 310 Query: 301 NKNVFNF 307 + F++ Sbjct: 311 GPSFFDW 317 >gi|332968975|gb|EGK08019.1| hydroxymethylbilane synthase [Kingella kingae ATCC 23330] Length = 312 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 104/303 (34%), Positives = 162/303 (53%), Gaps = 3/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LA+ A ++ L ++ P I I+ ++T+GD+I ++TL++IGGKGL Sbjct: 5 KKLTIASRESALAMWQARHIQAQLQALY--PDCQIDILGMTTQGDQILDKTLSKIGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L D AVHS KD+P L +G + A R + D F+S+ L+DL Sbjct: 63 FIKELETALQENRADLAVHSIKDVPMDLPEGFALVAIGERANPFDAFVSNQYARLEDLPQ 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+A L +++ RG ++TRL KL+N AI+LA AG++RL+ + Sbjct: 123 GAIVGTSSLRREAQLRARFPHLNIKPLRGNVQTRLAKLDNGDYDAIILAAAGLERLELHE 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ +L+ D P+ GQGA+ IE + + + +NH T V ERA L GS Sbjct: 183 RIRSVLSPADSLPAAGQGALGIEIAAHRADLVQTLLPLNHAKTAACVTAERALARALGGS 242 Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ +A + L +G+V DG + V A +GR A+ + K Sbjct: 243 CQVPLAAYCTADDNGVLTLHGLVAHPDGSVMLTVQAQAPAEYADALGRAVAKKLADDGAK 302 Query: 303 NVF 305 +V Sbjct: 303 DVI 305 >gi|319892715|ref|YP_004149590.1| Porphobilinogen deaminase [Staphylococcus pseudintermedius HKU10-03] gi|317162411|gb|ADV05954.1| Porphobilinogen deaminase [Staphylococcus pseudintermedius HKU10-03] Length = 309 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 175/305 (57%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L +V P +I I + TKGD+I +R L+++GGKGL Sbjct: 2 RKLIVGSRRSQLALTQSQQFIDRLKEV--DPTLDIEIKEIVTKGDQIVDRQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L + +ID A+HS KD+P++L +GL + RE+ D FIS L +L Sbjct: 60 FVKEIQNELFNRDIDMAIHSLKDVPSELPEGLTLGCIPDRENPFDAFISKNHIPLDELPD 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG+KR+ + Sbjct: 120 GSIIGTSSLRRGAQILAKYPNLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ L+ + P+ GQGA+ IE ++ + L+ +++ED V ER FL E++G Sbjct: 180 DIVTTYLDEDLLVPAIGQGALGIECRADDDELLALLAKVHNEDVSACVTAERTFLKEMNG 239 Query: 243 SCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ I G+A K T + F G++++ DGK E + +G D I +G + ++ ++ Sbjct: 240 SCQVPIGGYATRKNDTEIQFTGLIMSPDGKQRFEYTFSG--QDPIQVGSEVSRVLKSQGA 297 Query: 302 KNVFN 306 + Sbjct: 298 DKIIQ 302 >gi|87118000|gb|ABD20307.1| HemC [Shigella dysenteriae] gi|87118002|gb|ABD20308.1| HemC [Shigella dysenteriae] gi|87118004|gb|ABD20309.1| HemC [Shigella dysenteriae] Length = 272 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 98/267 (36%), Positives = 147/267 (55%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L + P+ GQGA+ IE +++ + Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPDISLPAVGQGAVGIECRLDDAR 185 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300 R G DA +G A+ + Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272 >gi|120602319|ref|YP_966719.1| porphobilinogen deaminase [Desulfovibrio vulgaris DP4] gi|158513905|sp|A1VCX6|HEM3_DESVV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|120562548|gb|ABM28292.1| hydroxymethylbilane synthase [Desulfovibrio vulgaris DP4] Length = 315 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 107/304 (35%), Positives = 158/304 (51%), Gaps = 2/304 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL A +S + H ++ + + TKGD I + L ++GGKGL Sbjct: 2 KHLVIATRGSKLALWQAEHIKSLIETEHAG-KVDVSLKIIKTKGDIILDVPLAKVGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+ G D AVHS KD+P +L +GL + RE+ D +S SL L Sbjct: 61 FVKEIEEALLDGSADLAVHSMKDVPMELPEGLFLGCIPEREEPSDTLLSVRYASLDALPH 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRR++ LL R D+ +I RG ++TRL KL + + AI++A AG+KRL Sbjct: 121 GARVGTSSLRRQSQLLALRPDLDIISLRGNVDTRLRKLMDGEFDAIVMATAGLKRLGLSA 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 E+L F P+ GQGA+ IE + ++++ ++H T V ER FLA L+G Sbjct: 181 PHHEVLAPPRFLPAVGQGALGIEFREDRADLRDMLAFLDHRPTRIRVEAERGFLAGLEGG 240 Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG A G G+V G+ + G +A N G + A + Sbjct: 241 CQVPIAGHAVMTGDDDFRIEGLVADLKGERVIRRTLEGTGANARNRGLELASQVLADGAA 300 Query: 303 NVFN 306 + + Sbjct: 301 EILD 304 >gi|325981153|ref|YP_004293555.1| porphobilinogen deaminase [Nitrosomonas sp. AL212] gi|325530672|gb|ADZ25393.1| porphobilinogen deaminase [Nitrosomonas sp. AL212] Length = 318 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 108/302 (35%), Positives = 165/302 (54%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LA+ A + L +++ P I I+ ++T+GD+I +++L++IGGKGL Sbjct: 9 KKIVIASRESLLAMWQAKFIQKCLSELY--PQTEISILGMTTRGDQILDQSLSKIGGKGL 66 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ L G D AVHS KDMP + +G +++A RED RD F+S+ SL L Sbjct: 67 FIKELEQALEDGRADIAVHSMKDMPMNVPEGFKLAAITEREDPRDAFVSNHHASLDVLPA 126 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S++GTSSLRR++ L + V RG ++TRL KL+ ++ AI+LA AG+KRL+ Sbjct: 127 GSIVGTSSLRRESQLRAHFPLLQVQPLRGNVQTRLRKLDEDQYAAIILAAAGLKRLELSN 186 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I +LN E P+ GQGA+ IE + +L++ ++H+ T V ER+ L GS Sbjct: 187 RITALLNPEQSLPAVGQGALGIECRADRMDLIQLMQPLHHQATAYCVEAERSMSRVLGGS 246 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ + FA L G V DGK + G I +G+ AQ + Sbjct: 247 CQVPLGAFAEIDNDKLRLRGFVAQPDGKRIVSGALEGKPETGIAMGQQLAQKLIKKGADE 306 Query: 304 VF 305 + Sbjct: 307 IL 308 >gi|46580299|ref|YP_011107.1| porphobilinogen deaminase [Desulfovibrio vulgaris str. Hildenborough] gi|55976453|sp|Q72AV0|HEM3_DESVH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|46449716|gb|AAS96366.1| porphobilinogen deaminase [Desulfovibrio vulgaris str. Hildenborough] gi|311233718|gb|ADP86572.1| porphobilinogen deaminase [Desulfovibrio vulgaris RCH1] Length = 315 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 107/304 (35%), Positives = 158/304 (51%), Gaps = 2/304 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL A +S + H ++ + + TKGD I + L ++GGKGL Sbjct: 2 KHLVIATRGSKLALWQAEHIKSLIETEHAG-KVDVSLKIIKTKGDIILDVPLAKVGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+ G D AVHS KD+P +L +GL + RE+ D +S SL L Sbjct: 61 FVKEIEEALLDGSADLAVHSMKDVPMELPEGLFLGCIPEREEPSDTLLSVRYASLDALPH 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRR++ LL R D+ +I RG ++TRL KL + + AI++A AG+KRL Sbjct: 121 GARVGTSSLRRQSQLLALRPDLDIISLRGNVDTRLRKLMDGEFDAIVMATAGLKRLGLAA 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 E+L F P+ GQGA+ IE + ++++ ++H T V ER FLA L+G Sbjct: 181 PHHEVLAPPRFLPAVGQGALGIEFREDRADLRDMLAFLDHRPTRIRVEAERGFLAGLEGG 240 Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG A G G+V G+ + G +A N G + A + Sbjct: 241 CQVPIAGHAVMTGDDNFRIEGLVADLKGERVIRRTLEGTGANARNRGLELASQVLADGAA 300 Query: 303 NVFN 306 + + Sbjct: 301 EILD 304 >gi|87117974|gb|ABD20294.1| HemC [Shigella boydii] gi|87117976|gb|ABD20295.1| HemC [Shigella boydii] gi|87117978|gb|ABD20296.1| HemC [Shigella boydii] gi|87117980|gb|ABD20297.1| HemC [Shigella boydii] gi|87117984|gb|ABD20299.1| HemC [Shigella boydii] gi|87117988|gb|ABD20301.1| HemC [Shigella boydii] gi|87117992|gb|ABD20303.1| HemC [Shigella boydii] gi|87117996|gb|ABD20305.1| HemC [Shigella boydii] gi|87118006|gb|ABD20310.1| HemC [Shigella dysenteriae] gi|87118010|gb|ABD20312.1| HemC [Shigella dysenteriae] gi|87118016|gb|ABD20315.1| HemC [Shigella dysenteriae] gi|87118020|gb|ABD20317.1| HemC [Shigella dysenteriae] gi|87118036|gb|ABD20325.1| HemC [Shigella flexneri] gi|87118042|gb|ABD20328.1| HemC [Escherichia coli] gi|87118044|gb|ABD20329.1| HemC [Escherichia coli] Length = 272 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 99/267 (37%), Positives = 147/267 (55%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 185 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300 R G DA +G A+ + Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272 >gi|33597222|ref|NP_884865.1| porphobilinogen deaminase [Bordetella parapertussis 12822] gi|33601068|ref|NP_888628.1| porphobilinogen deaminase [Bordetella bronchiseptica RB50] gi|39931443|sp|Q7W785|HEM3_BORPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|39931458|sp|Q7WKM1|HEM3_BORBR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|33573649|emb|CAE37934.1| porphobilinogen deaminase [Bordetella parapertussis] gi|33575503|emb|CAE32581.1| porphobilinogen deaminase [Bordetella bronchiseptica RB50] Length = 314 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 109/300 (36%), Positives = 157/300 (52%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A R L + P ++ ++ L+T+GD+I +RTL+++GGKGLF Sbjct: 7 LTIATRASRLALWQAEHVRDLLRA--RYPACSVELLTLTTRGDQILDRTLSKVGGKGLFV 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P L ++S L R D RD F+S+ SL DL + Sbjct: 65 KELETALLDGRADLAVHSLKDVPVDLHAPFELSCVLERADPRDAFVSNDYGSLADLPPGA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR++ + + V RG ++TRL KL+N AI+LA AG++RL I Sbjct: 125 AVGTSSLRRESQIRARYPHLVVKPLRGNLDTRLGKLDNGDYAAIVLAAAGLERLGLAARI 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + +L D P+ GQGA+ IE + ++ + T V ERA L GSC+ Sbjct: 185 RALLEPADSLPAAGQGALGIEILQGRADVRAMLAPLGDAATLACVTAERAVSRMLGGSCQ 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A +A G L +V A DG+ R G R A IG AA+ + + Sbjct: 245 VPLAAYARIDGDELALRALVAAPDGRRIVRAERRGPRDQAQAIGESAARDLLADGADAIL 304 >gi|194707246|gb|ACF87707.1| unknown [Zea mays] gi|223947939|gb|ACN28053.1| unknown [Zea mays] Length = 356 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 131/306 (42%), Positives = 183/306 (59%), Gaps = 5/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGL Sbjct: 48 IRIGTRGSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGL 107 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L Sbjct: 108 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPA 167 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+G++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RLK + Sbjct: 168 GSVVGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLKMAE 227 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+ Sbjct: 228 NATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVTCEREFLAVLDGN 287 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFIS 300 C++ IA +AY F G++ + DG E +R+G D + +G+DA ++ + Sbjct: 288 CRTPIAAYAYRDKDGNCSFRGLLSSPDGSKVFETARSGPYSFDDMVEMGKDAGHELKAKA 347 Query: 301 NKNVFN 306 F+ Sbjct: 348 GPGFFD 353 >gi|86609244|ref|YP_478006.1| porphobilinogen deaminase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557786|gb|ABD02743.1| porphobilinogen deaminase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 310 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 103/304 (33%), Positives = 152/304 (50%), Gaps = 5/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R S LAL L + H P + + LST+GD I + L +IG KGLFT Sbjct: 1 MRIASRKSELALVQTQWVMGQLQEHH--PGLPLELNTLSTQGDIILDVALAKIGDKGLFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSLKDLA 122 +E+E L++G D AVHS KD+PT+L +GL + A RED D + L L Sbjct: 59 KELEVSLLNGSSDLAVHSLKDLPTRLPEGLVLGAITRREDPLDALVVGEKFRDYRLATLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR A L + D RG + TRL KL + ++LA AG+KRL K Sbjct: 119 EGTVIGTSSLRRLAQLRHAFPHLHFKDVRGNLNTRLAKLERGEYDGLILAVAGLKRLGKA 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E+L+ + GQG++ IE + + EL++ + + ERAFL L+G Sbjct: 179 DRIHEVLDPGVSLYAVGQGSLGIECRQGDERILELIRPLADAEATARCLAERAFLRALEG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I + +G L+ G+V DG+ ++ G+ D +G A+ ++ Sbjct: 239 GCQVPIGVHSQVQGEALHLTGMVADLDGRRLIRDTQTGSTADPEAVGMALAEKLKQQGAD 298 Query: 303 NVFN 306 + Sbjct: 299 EILQ 302 >gi|323464250|gb|ADX76403.1| porphobilinogen deaminase [Staphylococcus pseudintermedius ED99] Length = 309 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 175/305 (57%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L +V P +I I + TKGD+I +R L+++GGKGL Sbjct: 2 RKLIVGSRRSQLALTQSQQFIDRLKEV--DPTLDIEIKEIVTKGDQIVDRQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L S +ID A+HS KD+P++L +GL + RE+ D FIS L +L Sbjct: 60 FVKEIQNELFSRDIDMAIHSLKDVPSELPEGLTLGCIPDRENPFDAFISKNHIPLDELPD 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG+KR+ + Sbjct: 120 GSIIGTSSLRRGAQILAKYPNLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ L+ + P+ GQGA+ IE ++ + L+ +++ED V ER FL E++G Sbjct: 180 DIVTTYLDEDLLVPAIGQGALGIECRADDDELLALLAKVHNEDVSACVTAERTFLKEMNG 239 Query: 243 SCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ I G+A K T + F G++++ DGK E + +G D I +G + ++ ++ Sbjct: 240 SCQVPIGGYATRKNDTEIQFTGLIMSPDGKQRFEYTFSG--QDPIQVGSEVSRVLKSQGA 297 Query: 302 KNVFN 306 + Sbjct: 298 DKIIQ 302 >gi|387506|gb|AAA39890.1| porphobilinogen deaminase (housekeeping) [Mus musculus] Length = 400 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 105/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + L ++ P II +ST GD+I + L++IG K L Sbjct: 58 RVIRVGTRKSQLARIQTETVVAMLKALY--PGIQFEIIAMSTTGDKIVDTALSKIGEKSL 115 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A R++ D + H ++L+ Sbjct: 116 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRQNPCDAVVFHPKFIGKTLET 175 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 L S +GTSSLRR A L R ++ RG + TRL KL+ + AI+LA AG++R+ Sbjct: 176 LPEKSAVGTSSLRRVAQLQRKFPNLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRM 235 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 236 GWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRH 295 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 296 LEGGCSVPVAVHTVIKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLV 355 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 356 GITARNIPRGAQLAAENLGISLASLLLNKGAKNILDV 392 >gi|295317399|ref|NP_001171279.1| porphobilinogen deaminase isoform 1a [Felis catus] gi|289191079|gb|ADC93652.1| hydroxymethylbilane synthase housekeeping form 1a [Felis catus] Length = 361 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + L ++ P I+ +ST GD+I + L++IG K L Sbjct: 19 RVIRVGTRKSQLARIQTDSVVAVLKALY--PGLQFEIVAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLET 136 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDEFQEFSAIILAAAGLQRM 196 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 197 GWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 256 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 257 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSMQETMQATICVTAQHEDGPEDDPQLV 316 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 317 GITARNIPRQAQLAAENLGISLASLLLNKGAKNILDV 353 >gi|87117968|gb|ABD20291.1| HemC [Shigella boydii] Length = 272 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 100/267 (37%), Positives = 147/267 (55%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 I TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 126 IGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 185 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300 R G DA +G A+ + Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272 >gi|163737211|ref|ZP_02144629.1| porphobilinogen deaminase [Phaeobacter gallaeciensis BS107] gi|161389815|gb|EDQ14166.1| porphobilinogen deaminase [Phaeobacter gallaeciensis BS107] Length = 320 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 128/307 (41%), Positives = 180/307 (58%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A ETR+ L+ +P I+ + T GD ++ L E+GG Sbjct: 12 PLKIGTRGSPLALAQAHETRARLVAAFDLPQDAFEIVVIKTSGDNQALIAADKPLKELGG 71 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+SG ID AVHS KDMP GL + YLPRED+RD F+S ++ D Sbjct: 72 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVAQPAGLLLDTYLPREDVRDAFVSPDVTAITD 131 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG+ RL Sbjct: 132 LRAGAVVGTSSLRRRAQLLHRRPDLQVVEFRGNVQTRLTKLRDGVAECTFLAMAGLNRLG 191 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++V + ED P+ QGAI IE ++ + +++ ++ +T + + ERAFLA L Sbjct: 192 ADQVPATPIPPEDMLPAVAQGAIGIERRADDSRTGDMLAALHDRETGERLAAERAFLAAL 251 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A +G TL G VL DG + D +GR+ A + + Sbjct: 252 DGSCETPIAGLATLEGRTLRLRGEVLRPDGSEAISDEQTCPVEDGAELGREMAAKLLAQA 311 Query: 301 NKNVFNF 307 F++ Sbjct: 312 GAGFFDW 318 >gi|87117970|gb|ABD20292.1| HemC [Shigella boydii] gi|87118022|gb|ABD20318.1| HemC [Shigella flexneri] gi|87118024|gb|ABD20319.1| HemC [Shigella flexneri] gi|87118026|gb|ABD20320.1| HemC [Shigella flexneri] gi|87118028|gb|ABD20321.1| HemC [Shigella flexneri] gi|87118034|gb|ABD20324.1| HemC [Shigella flexneri] gi|87118038|gb|ABD20326.1| HemC [Shigella flexneri] gi|87118040|gb|ABD20327.1| HemC [Shigella flexneri] Length = 272 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 99/267 (37%), Positives = 147/267 (55%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTR 185 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLCALVGAPDGSQI 245 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300 R G DA +G A+ + Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272 >gi|256828337|ref|YP_003157065.1| porphobilinogen deaminase [Desulfomicrobium baculatum DSM 4028] gi|256577513|gb|ACU88649.1| porphobilinogen deaminase [Desulfomicrobium baculatum DSM 4028] Length = 311 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 102/302 (33%), Positives = 157/302 (51%), Gaps = 2/302 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR S LAL A L + P + + + TKGD+I + L +IGGKGLF Sbjct: 3 TIRIATRGSKLALWQAHHISGLLRA--QYPGMTVELNIIKTKGDKILDVPLAKIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE+ L++ E D AVHS KD+P +L +GL++ RE D F+S + L Sbjct: 61 VKEIEEALLADEADIAVHSMKDVPAQLPEGLKLGIIPEREQPTDSFLSVNYPDIASLPAG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+ L+ R D+ ++ RG ++TR+ KL + AI++A AG+ RL+ Sbjct: 121 ARVGTSSLRRQTQLMGLRRDLCILSLRGNLDTRVGKLMAGEFDAIIVATAGMNRLELSAP 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + L F P+ QGA+ IE + P+ EL+ ++H + V ER+FL LDG C Sbjct: 181 HMQELAPPMFYPAVAQGALGIEYRADRPQLDELLAFLDHAPSKICVEAERSFLFGLDGGC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + IAG+A G+ + G+V G+ A+ +G A+ + K + Sbjct: 241 QVPIAGYATLSGTEITLTGLVADLCGERVIRRQATALSHAAVELGAQVAKAVLADGGKEI 300 Query: 305 FN 306 + Sbjct: 301 LD 302 >gi|270158066|ref|ZP_06186723.1| porphobilinogen deaminase [Legionella longbeachae D-4968] gi|289163669|ref|YP_003453807.1| Porphobilinogen deaminase HemC [Legionella longbeachae NSW150] gi|269990091|gb|EEZ96345.1| porphobilinogen deaminase [Legionella longbeachae D-4968] gi|288856842|emb|CBJ10653.1| Porphobilinogen deaminase HemC [Legionella longbeachae NSW150] Length = 310 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 165/306 (53%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLAL A R L ++K P NI ++P++T GD+ L +GG Sbjct: 1 MNSRIIRIATRQSPLALWQANYVRQLL--LNKWPKLNIELLPMTTSGDKFLKDKLLAVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ D AVHS+KDMP + GL ++A R++ D +SH SL+ Sbjct: 59 KGLFVKELEEALLDKRADFAVHSSKDMPAEFPHGLCLAAICKRDNPFDALVSHHYTSLQT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++IGT+SLRR++ LL +RSD+ V RG I TRL KL + AI+LA +G++R+ Sbjct: 119 LPERAIIGTASLRRQSQLLAYRSDLCVKPLRGNINTRLEKLRAGEYQAIILAASGLERMG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 VI E L E P+ GQGA+ IE ++ + LV +N + V+ ER A+L Sbjct: 179 FTHVITEQLPTEIMLPACGQGALAIECRTDDQETLALVAELNDPISSLCVHTERQVNAQL 238 Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G+C +A F + + L +L DG ++ G+ A N+ +Q + Sbjct: 239 GGNCHIPLAVFCTPIEKNQLLLQAKILTIDGSQTIADTQMGSFAQATNMADRCSQSLIAQ 298 Query: 300 SNKNVF 305 N+ Sbjct: 299 GAANLL 304 >gi|163740378|ref|ZP_02147772.1| porphobilinogen deaminase [Phaeobacter gallaeciensis 2.10] gi|161386236|gb|EDQ10611.1| porphobilinogen deaminase [Phaeobacter gallaeciensis 2.10] Length = 320 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 128/307 (41%), Positives = 180/307 (58%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A ETR+ L+ +P I+ + T GD ++ L E+GG Sbjct: 12 PLKIGTRGSPLALAQAHETRARLVAAFDLPQDAFEIVVIKTSGDNQALIAADKPLKELGG 71 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+SG ID AVHS KDMP GL + YLPRED+RD F+S ++ D Sbjct: 72 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVAQPAGLLLDTYLPREDVRDAFVSPDVTAITD 131 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG+ RL Sbjct: 132 LRAGAVVGTSSLRRRAQLLHRRPDLQVVEFRGNVQTRLTKLRDGVAECTFLAMAGLNRLG 191 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++V + ED P+ QGAI IE ++ + +++ ++ +T + + ERAFLA L Sbjct: 192 ADQVPATPIPPEDMLPAVAQGAIGIERRADDSRTGDMLAALHDRETGERLAAERAFLAAL 251 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A +G TL G VL DG + D +GR+ A + + Sbjct: 252 DGSCETPIAGLATLEGRTLRLRGEVLRPDGSEAISDEQTCPVEDGAELGREMATKLLAQA 311 Query: 301 NKNVFNF 307 F++ Sbjct: 312 GAGFFDW 318 >gi|302879710|ref|YP_003848274.1| porphobilinogen deaminase [Gallionella capsiferriformans ES-2] gi|302582499|gb|ADL56510.1| porphobilinogen deaminase [Gallionella capsiferriformans ES-2] Length = 317 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 103/300 (34%), Positives = 159/300 (53%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A R L ++ P ++ I+ ++T+GD+I + +L++IGGKGLF Sbjct: 15 LVIASRESALAMWQAEHIRDRLRALY--PQTDVSILGMTTQGDQILDVSLSKIGGKGLFV 72 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P L +G ++A RED D F+S+ ++L L S Sbjct: 73 KELETALEDGRADFAVHSLKDVPMVLPEGFVLAAIGEREDPHDAFVSNNYENLAALPAGS 132 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR++ L + + RG ++TRL KL+ AI+LA AG+KRL I Sbjct: 133 VVGTSSLRRESQLRARFPHLVIEPLRGNVQTRLRKLDEGLYAAIILAAAGLKRLGLATRI 192 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + +++ ED P+ GQGA+ IE + ++ ++H DT V ERA L+GSC+ Sbjct: 193 RAVISSEDSLPAVGQGALGIECRADRLDVIAALQPLHHPDTAACVFAERAMSRALNGSCQ 252 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + GFA + L G V + DG+ G +G A+ + + Sbjct: 253 VPLGGFAEVQNGQLRMRGFVASPDGQRVIRAEAMGEIAAPEALGGQIAKSLLAQGAGEIL 312 >gi|258404816|ref|YP_003197558.1| porphobilinogen deaminase [Desulfohalobium retbaense DSM 5692] gi|257797043|gb|ACV67980.1| porphobilinogen deaminase [Desulfohalobium retbaense DSM 5692] Length = 311 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 101/303 (33%), Positives = 154/303 (50%), Gaps = 3/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + I TR S LAL A + L + + P + + + T+GD+I + L +IGGK L Sbjct: 2 RSLTIATRGSKLALWQANHIKGRLEE--RYPGIEVHLEVIKTQGDKILDVPLAKIGGKAL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ ++ G D AVHS KD+P +L +GL + RED D +S +L+++ Sbjct: 60 FVKEIEEAMLDGRADLAVHSMKDVPAELPEGLTLGVIPQREDYTDCLLSQHYTTLEEIPE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSSLRRK LLR R D+ + D RG ++TR+ KL AI++A AG++RL+ Sbjct: 120 GATIGTSSLRRKTQLLRLRPDLVIQDLRGNLDTRIRKLEEGMFDAIVVASAGLRRLQTGA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 L F P+ GQGA+ IE + +E++ ++H T V ERAFL L+G Sbjct: 180 RYMTELAPPQFLPAVGQGALGIEYPEDRKDLEEMLGFLDHPPTRFCVLTERAFLHRLEGG 239 Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I G A + + L+ V G+ D + +G+ A I Sbjct: 240 CQVPIGGHAVMSESNKLHLDCFVADLHGQQCLRREGEAKPKDGVALGQRLADDILASGGA 299 Query: 303 NVF 305 + Sbjct: 300 EIL 302 >gi|87118018|gb|ABD20316.1| HemC [Shigella dysenteriae] gi|87118046|gb|ABD20330.1| HemC [Escherichia coli] Length = 272 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 98/267 (36%), Positives = 147/267 (55%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 185 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300 R G +A +G A+ + Sbjct: 246 IRGERRGAPQNAEQMGISLAEELLNNG 272 >gi|94264595|ref|ZP_01288379.1| Porphobilinogen deaminase [delta proteobacterium MLMS-1] gi|93454949|gb|EAT05186.1| Porphobilinogen deaminase [delta proteobacterium MLMS-1] Length = 311 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 108/283 (38%), Positives = 161/283 (56%), Gaps = 2/283 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LALA A + + H P + ++ + TKGD+I + L ++GGKGLF Sbjct: 5 IRIGTRASMLALAQANWIKGRIEAQH--PQCRVELVKIITKGDKIVDVPLAKVGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ ++ GE+D AVHS KD+P +L +GL I RE+ D F+S+ Q+++ L + Sbjct: 63 KEIEEAMLRGEVDIAVHSMKDVPAELPQGLHIGIITQRENPFDAFVSNLYQNIEALPTGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRRK+ L R D+++ D RG ++TRL KL+ + I+LA AG+ RL Sbjct: 123 RVGTSSLRRKSQLAALRPDLTIEDLRGNLDTRLRKLDEGQYDGIILAAAGLNRLDLAHRA 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E P+ QGA+ IE + E++ ++H T +V ERA+L L+G C+ Sbjct: 183 TFYFQAEQMLPAVAQGAVGIELRRADADLLEMLSFMDHRATTLAVKAERAYLKRLEGGCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 +AGFA G L +V A DG +VS++G +A I Sbjct: 243 VPLAGFATLDGDRLQLDTLVAAIDGSRLLKVSKSGPAEEAEEI 285 >gi|295317401|ref|NP_001171280.1| porphobilinogen deaminase isoform 2a [Felis catus] gi|289191083|gb|ADC93654.1| hydroxymethylbilane synthase erythroid form 2a [Felis catus] gi|289191085|gb|ADC93655.1| hydroxymethylbilane synthase erythroid form 2b [Felis catus] Length = 344 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + L ++ P I+ +ST GD+I + L++IG K L Sbjct: 2 RVIRVGTRKSQLARIQTDSVVAVLKALY--PGLQFEIVAMSTTGDKILDTALSKIGEKSL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 60 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLET 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 120 LPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDEFQEFSAIILAAAGLQRM 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 180 GWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 240 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSMQETMQATICVTAQHEDGPEDDPQLV 299 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 300 GITARNIPRQAQLAAENLGISLASLLLNKGAKNILDV 336 >gi|303326737|ref|ZP_07357179.1| hydroxymethylbilane synthase [Desulfovibrio sp. 3_1_syn3] gi|302862725|gb|EFL85657.1| hydroxymethylbilane synthase [Desulfovibrio sp. 3_1_syn3] Length = 310 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 158/305 (51%), Gaps = 3/305 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K I TR S LAL A +S L + P + + + TKGD I + L+++GGKG Sbjct: 2 RKHLVIATRGSRLALWQAEHVKSRLEA--QDPGLTVSLNVIKTKGDIILDVPLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L+ G D AVHS KD+P L +GL + RE D F+S L Sbjct: 60 LFVKEIEEALLDGRADLAVHSIKDVPMVLPEGLILGCVPQREACTDCFLSVHYADPDALP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR+A LL R D+ + RG ++TRL KL N + AI+LA AG+ RL Sbjct: 120 QKAHVGTSSLRRQAQLLSMRPDLRISSLRGNVDTRLRKLQNGEYDAIILASAGLNRLGLS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 L+ E F P+ GQGA+ IE +N L+ + + T V+ ER FLA L+G Sbjct: 180 APYMAPLDPERFLPAVGQGALGIECREDNYDLLVLLASLENRATRVCVDAERGFLAGLEG 239 Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG A T+ G+V DG + +NGN DA +G + A + Sbjct: 240 GCQVPIAGHARLVDEETVSLKGLVAEVDGSLILRGEKNGNAADARALGLELAGELLNKGG 299 Query: 302 KNVFN 306 + + Sbjct: 300 RAILE 304 >gi|93004929|ref|YP_579366.1| porphobilinogen deaminase [Psychrobacter cryohalolentis K5] gi|92392607|gb|ABE73882.1| hydroxymethylbilane synthase [Psychrobacter cryohalolentis K5] Length = 345 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 103/330 (31%), Positives = 168/330 (50%), Gaps = 31/330 (9%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR SPLAL A R+ L+ ++ P I ++ + TKGD+I + L +IGGKGLF Sbjct: 11 TLNIATRQSPLALWQAEHIRNRLLALY--PEMTINLLKIVTKGDKILDTPLAKIGGKGLF 68 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E+ L + D AVHS KD+P L +GL + Y R D F+S+T S+ +L Sbjct: 69 VKELEQALYDKQADIAVHSLKDVPMDLPEGLTLGVYCKRASPTDAFVSNTYHSIAELPQG 128 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GT+SLRR+ + +R D+ + RG + TRL+KL+ + AI+LA +G+KR++ + Sbjct: 129 AVVGTASLRRQCQIKAYRPDLQIKTLRGNVGTRLSKLDAGEYDAIILATSGLKRIELDAR 188 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ L+I P+ GQGA+ IE ++ +L+ +N + + ERA L G C Sbjct: 189 IRSELDINICLPAVGQGALAIECREDDADVLKLLAPLNDDKARIRLIAERALNRHLQGGC 248 Query: 245 KSAIAGFAYCKGS---------------------TLYFYGIVLASDGKIFHEV----SRN 279 + IA +A + + TL+ G V DG +V + Sbjct: 249 QVPIAAYAVLQKADALAADNDSNDNDNGNNDAGDTLWLRGRVGQEDGSELLKVDKRQTLT 308 Query: 280 GNRCD----AINIGRDAAQYIRFISNKNVF 305 G++ + A +G + A+ + + Sbjct: 309 GSQAEQEAQANQLGIEVAEMLLQAGAGEIL 338 >gi|87118008|gb|ABD20311.1| HemC [Shigella dysenteriae] gi|87118014|gb|ABD20314.1| HemC [Shigella dysenteriae] Length = 272 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 99/267 (37%), Positives = 146/267 (54%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE + + + Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLGDAR 185 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300 R G DA +G A+ + Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272 >gi|261364223|ref|ZP_05977106.1| hydroxymethylbilane synthase [Neisseria mucosa ATCC 25996] gi|288567837|gb|EFC89397.1| hydroxymethylbilane synthase [Neisseria mucosa ATCC 25996] Length = 311 Score = 352 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 102/306 (33%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL++IGG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKTLY--PDCEVEILGMTTRGDQILDKTLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFIKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPKGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + +++K +NH+ T V ERA L Sbjct: 179 LDERIRLILSEADSLPAAGQGALGIEIAAHRTDLLDVLKPLNHDVTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEEDGLLTLRGLVGHPDGSVILQAHAQAPAAYAEALGRAVAKKLADDG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 AQELIE 304 >gi|314933825|ref|ZP_07841190.1| hydroxymethylbilane synthase [Staphylococcus caprae C87] gi|313653975|gb|EFS17732.1| hydroxymethylbilane synthase [Staphylococcus caprae C87] Length = 309 Score = 352 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 173/304 (56%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L V P +I I + TKGD+I ++ L+++GGKGL Sbjct: 2 RKLVVGSRRSKLALTQSQQFIYKLKKV--DPDLDIEIKEIVTKGDQIVDKQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L + EID A+HS KD+P+ + +GL + RE D +IS L +L Sbjct: 60 FVKEIQNELFNKEIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHTPLSELTE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 S++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ + Sbjct: 120 GSIVGTSSLRRGAQILSKYPHLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ L+ + P+ GQGA+ IE ++ + EL+K ++++D V ER FL+E+DG Sbjct: 180 DIVTTYLDKDVLLPAIGQGALGIECRSDDKELLELLKKVHNQDVAQCVTAERTFLSEMDG 239 Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ I G+A G + F G+++ DGK +E + G D + +G++ ++ ++ Sbjct: 240 SCQVPIGGYATIDGDKQIEFTGLIMTPDGKERYEHTAKG--LDPVELGQEVSRVLKEQGA 297 Query: 302 KNVF 305 + Sbjct: 298 YEII 301 >gi|268679946|ref|YP_003304377.1| porphobilinogen deaminase [Sulfurospirillum deleyianum DSM 6946] gi|268617977|gb|ACZ12342.1| porphobilinogen deaminase [Sulfurospirillum deleyianum DSM 6946] Length = 314 Score = 352 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 107/304 (35%), Positives = 162/304 (53%), Gaps = 5/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL + ++ L H P + + + TKGD+I + L +IGGKGL Sbjct: 2 KKLIIATRGSKLALWQSEHVKAELEKAH--PHLAVELSIMMTKGDKILDTPLAKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E+ ++ GE AVHS KD+P + +GL++ RED+RD +S L+DL Sbjct: 60 FTKELEEAMLRGEAHIAVHSLKDVPMEFPEGLKLGVITKREDVRDAMLSEKYGCLEDLPQ 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GT+SLRR+ LL+ R D + + RG + TR+ KL + AI+LA AGIKRL ++ Sbjct: 120 GAVVGTTSLRRRMQLLKLRPDFVIKNLRGNVNTRIRKLKEGEFDAIILASAGIKRLGLQE 179 Query: 184 VIKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 ++ I E P+ GQ A+ IE V+N + + LV V+ ED ER F+ L+ Sbjct: 180 EVRYFTPISKEVMIPASGQAALGIEI-VDNAEVERLVSVLKDEDAMIETRVERDFVTLLE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I A +L+ I+ DG +G R + +G+ AQ + Sbjct: 239 GGCQVPIGVNAEVTQESLHVKAILGLPDGSQMMCEVMSGKREEFETLGKVLAQKVIDKGA 298 Query: 302 KNVF 305 K + Sbjct: 299 KELL 302 >gi|94311681|ref|YP_584891.1| porphobilinogen deaminase [Cupriavidus metallidurans CH34] gi|93355533|gb|ABF09622.1| hydroxymethylbilane synthase [Cupriavidus metallidurans CH34] Length = 334 Score = 352 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 163/304 (53%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R++L + P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 21 KLVIASRESRLAMWQAEHVRAALQQYY--PSCDVSILGMTTRGDQILDRTLSKVGGKGLF 78 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E + G D AVHS KD+P +L +G ++A + RED RD +S SL+++ Sbjct: 79 VKELEVAMSEGRADLAVHSLKDVPMELPEGFTLTAVMEREDPRDALVSAQFASLEEMPAG 138 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A L + + RG ++TRL KL+ + AI+LA AG+KRL Sbjct: 139 TVVGTSSLRREAALRSRFPHLVIKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGDR 198 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ ++ E P+ GQGA+ IE + P+ E + +NH T +V+ ERA L GSC Sbjct: 199 IRALIAPESSLPAAGQGALGIEIRADRPELAEWLAPLNHLPTLLAVSAERAVSRRLGGSC 258 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301 + +A A + ++L V DG G DA +G A + Sbjct: 259 QVPLAAHARWRDASLQLDAFVALPDGSRQVRAHATGPVATVADAEALGTAVAGDLLAQGA 318 Query: 302 KNVF 305 V Sbjct: 319 DGVL 322 >gi|328952141|ref|YP_004369475.1| Porphobilinogen deaminase [Desulfobacca acetoxidans DSM 11109] gi|328452465|gb|AEB08294.1| Porphobilinogen deaminase [Desulfobacca acetoxidans DSM 11109] Length = 311 Score = 352 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 112/303 (36%), Positives = 164/303 (54%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RIGTR S LALA A + + + P + + + T GD+I + L +IGGKG Sbjct: 2 KNHLRIGTRGSALALAQAAWVQQQIQ--GRYPQITVDLEIIKTTGDKIQDVALAKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+EIE ++SGE+D VHS KD+PT++ GL I RED RD FIS +SL ++ Sbjct: 60 LFTKEIEMAILSGEVDLGVHSMKDVPTEIPLGLVIGITTVREDPRDAFISRKYRSLAEIP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 L IGT SLRR+A LL R D+ ++ RG ++TRL KL AI+LA AG+ RL + Sbjct: 120 LGGRIGTGSLRRRAQLLHLRPDLEIVPLRGNVDTRLRKLTEADLDAIILAAAGLHRLGRA 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I IL P+ GQGA+ +E ++ EL++ ++ +T +V ERAFLA L+G Sbjct: 180 AEITAILPETQMLPAIGQGALGLEYRQDDAVTMELLEFLDDPETRVAVAAERAFLARLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IA K L+ G++ G + + A ++G+ A+ + Sbjct: 240 GCQVPIAAMGTLKKGELFLDGLIGDLAGSRIYREQLSRPPAAAADLGQQLAETLLKRGGA 299 Query: 303 NVF 305 + Sbjct: 300 QIL 302 >gi|83594897|ref|YP_428649.1| porphobilinogen deaminase [Rhodospirillum rubrum ATCC 11170] gi|83577811|gb|ABC24362.1| Porphobilinogen deaminase [Rhodospirillum rubrum ATCC 11170] Length = 321 Score = 352 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 126/313 (40%), Positives = 175/313 (55%), Gaps = 7/313 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIG 59 EK RIGTR SPLALA + R L+ + + I + T GD I +R L+E+G Sbjct: 6 EKSKLRIGTRGSPLALAQTHQVRDLLIAANPDLGEPGAVTIEVIKTTGDAILDRPLSELG 65 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLFT EI+ +++G ID AVHS KD+PT L G+ + L RED+RD F+ L Sbjct: 66 GKGLFTREIDDAMLAGTIDIAVHSMKDVPTYLPDGIVLPCMLEREDVRDAFLGRDHARLA 125 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL SV+GT+SLRR A +L R DI VI FRG ++TRL+KL +A A +LA AG+ RL Sbjct: 126 DLPEGSVVGTASLRRGAQILAMRPDIKVISFRGNVQTRLDKLARGEADATMLAIAGLNRL 185 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 +L I++ P+ QGA+ + + A + +NH T V ERAFL Sbjct: 186 GMADKASSVLEIDEMLPAVAQGAVGVTCRAGDETAHRWLAPLNHRATQLCVEIERAFLTR 245 Query: 240 LDGSCKSAIAGFAYCK-----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 LDGSC++ I G A K T++F G+++ +DGK+ H+ +R G D I +G DA Sbjct: 246 LDGSCRTPIGGLARLKRVEDPSGTVFFRGMIIRTDGKVIHQTTREGLAADGIALGDDAGA 305 Query: 295 YIRFISNKNVFNF 307 + + F Sbjct: 306 ELLAKAGPGFFQV 318 >gi|110598700|ref|ZP_01386964.1| porphobilinogen deaminase [Chlorobium ferrooxidans DSM 13031] gi|110339694|gb|EAT58205.1| porphobilinogen deaminase [Chlorobium ferrooxidans DSM 13031] Length = 313 Score = 352 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 118/307 (38%), Positives = 171/307 (55%), Gaps = 6/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG G Sbjct: 2 KKQLIIGTRSSPLALWQAEFTKTEL--SRHFPELDIKLKLVKTTGDVLLDSPLSKIGDMG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT++IEK LI+ EID AVHS KD+PT +GL I+++ RED RDV IS LK+L Sbjct: 60 LFTKDIEKHLIAKEIDLAVHSLKDVPTGTPEGLIITSFTEREDTRDVIISKGGVKLKELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ + TSSLRR + LL R D+ + D RG + TR K + + A++LAYAG+ RL Sbjct: 120 ANAKMATSSLRRMSQLLSLRPDLDIRDIRGNLNTRFQKFDAGEFDAMMLAYAGVYRLNFS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EIL E P+ GQGA+ IET V++ + +E+V+++NH +T ERA L L G Sbjct: 180 DRISEILPHEVMLPAVGQGALGIETRVDDEQTREIVRILNHSNTEYCCRAERALLRHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFH--EVSRNG--NRCDAINIGRDAAQYIRF 298 C+ I + + TL V + DGK+ E+++ G + A G A+ + Sbjct: 240 GCQIPIGAYGSFQNGTLKLLAYVGSVDGKVGLHDEITKTGLTSPEQAEEAGIALAEKLLA 299 Query: 299 ISNKNVF 305 + Sbjct: 300 QGADAIL 306 >gi|89069761|ref|ZP_01157097.1| porphobilinogen deaminase [Oceanicola granulosus HTCC2516] gi|89044707|gb|EAR50818.1| porphobilinogen deaminase [Oceanicola granulosus HTCC2516] Length = 313 Score = 352 bits (904), Expect = 3e-95, Method: Composition-based stats. Identities = 132/304 (43%), Positives = 176/304 (57%), Gaps = 1/304 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P +IGTR SPLALA A ETR L H +P ++ + T GDR+ +R L EIGGKGL Sbjct: 9 RPLKIGTRGSPLALAQAHETRDRLAAAHGLPGEAFEVVVIRTTGDRVVDRPLKEIGGKGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EIE+ ++SG ID AVHS KDMP +GL + YLPRED RD F+S +K L Sbjct: 69 FTKEIEEAMLSGAIDIAVHSMKDMPVAQPEGLVLDCYLPREDPRDAFVSLLHAGIKALPD 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRKA LL R D+ V++FRG ++TRL KL + A A LA AG+ RL + Sbjct: 129 GATVGTSSLRRKAQLLHRRPDLHVVEFRGNVQTRLRKLESGVAVATFLAVAGLNRLGADD 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V + + ED P+ QGAI IE ++ E++ I+ T + + ERAFLA LDGS Sbjct: 189 VPQAPIAPEDMLPAVAQGAIGIERRASDEGLGEMLAAIHDRATGERLAAERAFLAALDGS 248 Query: 244 CKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C++ IAG A G L G +LA DG D +G D A+ + + Sbjct: 249 CETPIAGLAELIGDGRLRLRGEILAHDGSRCLADEAEAQIADGAALGTDMARRLLAQAGP 308 Query: 303 NVFN 306 F+ Sbjct: 309 GFFD 312 >gi|84685204|ref|ZP_01013103.1| porphobilinogen deaminase [Maritimibacter alkaliphilus HTCC2654] gi|84666936|gb|EAQ13407.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2654] Length = 319 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 136/310 (43%), Positives = 183/310 (59%), Gaps = 5/310 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEI 58 KP +IGTR SPLALA A+ETR L +P I+ + T GD +R L EI Sbjct: 9 TKPLKIGTRGSPLALAQAYETRDRLAAAFDLPETAFEIVVIKTTGDDRAMIAADRPLKEI 68 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G KGLFT EIE +L++G ID AVHS KDMPT+ GL + YLPRED RD FIS + Sbjct: 69 GNKGLFTREIEDQLLNGGIDLAVHSMKDMPTEQPPGLTLDCYLPREDTRDAFISLGGGGI 128 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 LA +V+GTSSLRRKA LL R D++V++FRG ++TRL KL + A A LA AGI R Sbjct: 129 HGLAEGAVVGTSSLRRKAQLLNRRPDLNVVEFRGNVQTRLTKLRDGVAEATFLAMAGITR 188 Query: 179 LKK-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 L ++V + + ED P+ QGAI IE ++ ++++ I+H T + ER+FL Sbjct: 189 LGMLDEVPHDAIAPEDMLPAIAQGAIGIERRSHDTNVADMLEAIHHGGTERRLAAERSFL 248 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 A LDGSC++ IAG A G TL G +L +DG +G D ++GR AQ + Sbjct: 249 ATLDGSCETPIAGLAEIDGGTLRLRGEILRTDGSEALADEISGAVEDGPDMGRALAQKLL 308 Query: 298 FISNKNVFNF 307 + + F++ Sbjct: 309 SRAGPDFFDW 318 >gi|226509736|ref|NP_001150986.1| LOC100284619 [Zea mays] gi|195643410|gb|ACG41173.1| porphobilinogen deaminase [Zea mays] Length = 356 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 130/306 (42%), Positives = 181/306 (59%), Gaps = 5/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGL Sbjct: 48 IRIGTRGSPLALAQAHETREKLKATHSELAEERAIEIVIIKTTGDMILDKPLADIGGKGL 107 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L Sbjct: 108 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPA 167 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SVIG++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RL + Sbjct: 168 GSVIGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLNMAE 227 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+ Sbjct: 228 NATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSALNHEDTRLAVACEREFLAVLDGN 287 Query: 244 CKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFIS 300 C++ IA +AY F G++ + G E +R+G D + +G+DA ++ + Sbjct: 288 CRTPIAAYAYRDNDGNCSFRGLLASPGGSKVFETTRSGPYSFDDMVEMGKDAGHELKAKA 347 Query: 301 NKNVFN 306 F+ Sbjct: 348 GPGFFD 353 >gi|194367302|ref|YP_002029912.1| porphobilinogen deaminase [Stenotrophomonas maltophilia R551-3] gi|238059002|sp|B4SJT8|HEM3_STRM5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|194350106|gb|ACF53229.1| porphobilinogen deaminase [Stenotrophomonas maltophilia R551-3] Length = 303 Score = 352 bits (903), Expect = 4e-95, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 160/303 (52%), Gaps = 2/303 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL + L H P ++ ++P+ST+GD + +R+L IGGKGLF Sbjct: 3 TVRIATRKSPLALWQSEHVADRLRQAH--PGLHVELVPMSTRGDEVLDRSLAAIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ GE DCAVHS KD+P +L + + A L R D D F+S+ SL L + Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDEPFALPAMLTRHDPADGFVSNLYASLDALPIG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A L R D+ ++D RG + TRL KL+N AI+LA AG++RL + Sbjct: 121 ARVGTSSLRRQAQLRALRPDLQLLDLRGNVNTRLAKLDNGGYDAIVLAVAGLERLGLGER 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L + P+P QGA+ +E +N + L ++ T V ERA L GSC Sbjct: 181 IVARLQPPQWLPAPAQGAVAVECDGSNARLMALFAGLDDAATRACVEAERAMNRALHGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 +A A +G L+ G+V ++ G D +G+ A+ + + Sbjct: 241 HVPVAAIAQWQGQDLHLQGLVGSASDGRAVRAEAVGPASDPEVLGQRVAKMLLDAGAGEL 300 Query: 305 FNF 307 N Sbjct: 301 LNV 303 >gi|242242934|ref|ZP_04797379.1| hydroxymethylbilane synthase [Staphylococcus epidermidis W23144] gi|242233535|gb|EES35847.1| hydroxymethylbilane synthase [Staphylococcus epidermidis W23144] Length = 308 Score = 352 bits (903), Expect = 4e-95, Method: Composition-based stats. Identities = 101/304 (33%), Positives = 173/304 (56%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L P +I I + TKGD+I ++ L+++GGKGL Sbjct: 2 RKLIVGSRRSKLALTQSQQFIDKLK--FIDPSLDIEIKEIVTKGDKIVDKQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L + EID A+HS KD+P+ + GL + RE D +I+ L++L+ Sbjct: 60 FVKEIQNELFNKEIDMAIHSLKDVPSIIPDGLTLGCIPDREIPFDAYIAKNHIPLEELSE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ Sbjct: 120 GSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSD 179 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ L+ + P+ GQGA+ IE ++ + +L+ +++ D V ER FL+E+DG Sbjct: 180 NIVTTYLDRDVLLPAIGQGALGIECRSDDKELLDLLAKVHNHDVAQCVTAERTFLSEMDG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ I G+A + + + F G++++ DGK +E + G+ D + +G + +Q ++ Sbjct: 240 SCQVPIGGYATIVQDNQIEFTGLIMSPDGKERYEHTTLGS--DPVQLGIEVSQVLKKQGA 297 Query: 302 KNVF 305 ++ Sbjct: 298 YDII 301 >gi|310815397|ref|YP_003963361.1| porphobilinogen deaminase [Ketogulonicigenium vulgare Y25] gi|308754132|gb|ADO42061.1| porphobilinogen deaminase [Ketogulonicigenium vulgare Y25] Length = 314 Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats. Identities = 132/302 (43%), Positives = 176/302 (58%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P RIGTR SPLALA A+ETR L +P I + GD + ++ L EIGGKGL Sbjct: 10 QPLRIGTRGSPLALAQAYETRDRLAQAFALPHEAFQIEVIKVTGDMVQDKALREIGGKGL 69 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT EIE L+ G ID AVHS KDMP + GL + YLPRED+RD F+S +L D+ Sbjct: 70 FTREIEDALLDGSIDIAVHSMKDMPVEQPAGLLLDCYLPREDVRDAFVSLHGWTLADVPA 129 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 VIGTSSLRR+A +L R D++V++FRG ++TRL KL+ A A LA AG+ RL++ Sbjct: 130 GKVIGTSSLRRRAQILARRPDLTVVEFRGNVQTRLKKLDEGVADATFLAMAGLNRLQRGD 189 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V + L +E P+ QGAI IE ++ + ++ VI+ T + ERAFLA LDGS Sbjct: 190 VPLKALEVEQMLPAVAQGAIGIERRADDRIIEGMLAVIHDGPTGVRLAAERAFLAGLDGS 249 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C + IAG A G + G VL DG G DA IG + A+ +R ++ + Sbjct: 250 CHTPIAGLAEIIGDQIRLRGEVLRPDGSEAICDDMRGAAVDAAQIGAEMARKLRGLAGEG 309 Query: 304 VF 305 F Sbjct: 310 FF 311 >gi|254508818|ref|ZP_05120929.1| porphobilinogen deaminase [Vibrio parahaemolyticus 16] gi|219548275|gb|EED25289.1| porphobilinogen deaminase [Vibrio parahaemolyticus 16] Length = 271 Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats. Identities = 96/263 (36%), Positives = 150/263 (57%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 + TKGD I + L ++GGKGLF +E+E ++ G D AVHS KD+P +GL + Sbjct: 1 MVTKGDIILDTPLAKVGGKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICE 60 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 RED RD F+S+T ++ +L +V+GT SLRR+ + +R D+ + + RG + TRL KL+ Sbjct: 61 REDPRDAFVSNTYNNIDELPHGAVVGTCSLRRQCQIKEYRPDLVIKELRGNVGTRLGKLD 120 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 + AI+LA AG+KRL+ E+ I+ + E P+ GQGA+ IE +++ + +L++ +N Sbjct: 121 AGEYDAIILAAAGLKRLELEERIRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLN 180 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 H+DT D V CERA L+G C+ I +A G ++ +V DG G R Sbjct: 181 HQDTADRVLCERAMNLTLEGGCQVPIGSYALLDGDEIWLRALVGEPDGSEIVRGEIKGAR 240 Query: 283 CDAINIGRDAAQYIRFISNKNVF 305 DA N+G A + + + Sbjct: 241 ADAENLGVTLANQLLDKGAREIL 263 >gi|189423573|ref|YP_001950750.1| porphobilinogen deaminase [Geobacter lovleyi SZ] gi|238058916|sp|B3E2H7|HEM3_GEOLS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189419832|gb|ACD94230.1| porphobilinogen deaminase [Geobacter lovleyi SZ] Length = 312 Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats. Identities = 115/306 (37%), Positives = 172/306 (56%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A T+S L + P + ++ + T GD+I + L ++GG Sbjct: 1 MAPKRLRIGTRASQLALWQANWTKSELEA--RYPGIQVELVKIKTMGDKILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD FIS + + Sbjct: 59 KGLFVKEIEEAMLRGEIDLAVHSMKDVPTEFPEGLGLVVTTKREDPRDAFIS-DKVTFSE 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A LL+ R D+ ++ RG +ETR+ KL + A++LA AG+ RL Sbjct: 118 LRQGARIGTSALRRQAQLLKARPDLEMVIIRGNVETRIRKLKEDNLDAVILAAAGLNRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V+ E+L+ + P+ GQGA+ +E +++ E + +NH DT +V ERA L Sbjct: 178 FTDVVTELLDTDFSIPAIGQGALGLECRLDDNATIEALAFLNHADTAAAVAAERALLKRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA G TL G + + DGK +G+ DA+ +G + A + Sbjct: 238 EGGCQVPIAAHGTVSGDTLTLVGFIASVDGKQTVRDRISGSTADAVKLGTELADRLLAAG 297 Query: 301 NKNVFN 306 K + Sbjct: 298 GKAILE 303 >gi|82751259|ref|YP_417000.1| porphobilinogen deaminase [Staphylococcus aureus RF122] gi|123727415|sp|Q2YTB9|HEM3_STAAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|82656790|emb|CAI81219.1| Porphobilinogen deaminase [Staphylococcus aureus RF122] Length = 308 Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats. Identities = 106/304 (34%), Positives = 168/304 (55%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGL Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L Sbjct: 60 FVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ L+I+ P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DG Sbjct: 180 DIVTSYLDIDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++ Sbjct: 240 SCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKKVSNKLKEQGA 297 Query: 302 KNVF 305 + Sbjct: 298 YEII 301 >gi|195953610|ref|YP_002121900.1| porphobilinogen deaminase [Hydrogenobaculum sp. Y04AAS1] gi|195933222|gb|ACG57922.1| porphobilinogen deaminase [Hydrogenobaculum sp. Y04AAS1] Length = 285 Score = 351 bits (902), Expect = 6e-95, Method: Composition-based stats. Identities = 115/293 (39%), Positives = 172/293 (58%), Gaps = 9/293 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+GTR S LAL A +S L + I ++ ++T GD+I + L++IGGKGLF Sbjct: 2 KLRLGTRKSKLALWQANFVKSKLEAL----GLEIELVLITTTGDKILDTPLSKIGGKGLF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE L+ EID AVHS KD+P + +GL + +L RED +D F+S + ++L +L + Sbjct: 58 VKEIENALMEDEIDFAVHSLKDVPAFIPQGLVVDVFLEREDPKDAFVSKSYKTLNELPPN 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGTSS+RRK LL+ R D+++ D RG ++TRL KL + AI+LA AG+KRL E V Sbjct: 118 AKIGTSSIRRKVQLLQRRKDLTIEDLRGNVDTRLKKLEDGLYDAIILASAGLKRLGFEGV 177 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L DF P+ GQG + IE +N + ++K INHE T+ ER+FL ++GSC Sbjct: 178 ISSYL---DFIPAVGQGIVAIEYKASNKELSNILKQINHEPTYICALAERSFLETVEGSC 234 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + + A + G + DG + E++ G D I +G+D A+ + Sbjct: 235 QIPMGAHATLAQDLIKIRGFIANEDGTNYRELTLEGK--DPIGLGKDLAKNLL 285 >gi|253995539|ref|YP_003047603.1| porphobilinogen deaminase [Methylotenera mobilis JLW8] gi|253982218|gb|ACT47076.1| porphobilinogen deaminase [Methylotenera mobilis JLW8] Length = 313 Score = 351 bits (902), Expect = 6e-95, Method: Composition-based stats. Identities = 104/302 (34%), Positives = 162/302 (53%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LA+ A +S L ++ P + I+ ++T GD+I + L ++GGKGL Sbjct: 11 KKLVIASRESALAMWQARHIQSRLQALY--PETEVTILGMTTTGDQILDTPLAKVGGKGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L G D AVHS KD+P L +G ++A RED RD F+S+ +L+DL Sbjct: 69 FVKELEIALADGRADLAVHSMKDVPMNLPEGFILAATGEREDPRDAFVSNDYATLEDLPA 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +S++GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+ RL+ Sbjct: 129 NSIVGTSSLRRQSQLQARFPHLKIESLRGNLQTRLRKLDEGQYAAIILAAAGLIRLELGN 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I++ + E P+ GQGA+ IE + P + +NH DT V ER L GS Sbjct: 189 RIRQFIAPEHSIPAVGQGALGIEISADRPDLIATLAPLNHPDTQVCVEAERGMSRSLAGS 248 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C + +A C+ ++ G V + DGK + G+R +A +G+ A + Sbjct: 249 CTVPLGAYAVCEADSIRITGFVASVDGKQMLIETAVGSRANAEALGKTLASQLVAKGADK 308 Query: 304 VF 305 + Sbjct: 309 IL 310 >gi|83952840|ref|ZP_00961570.1| porphobilinogen deaminase [Roseovarius nubinhibens ISM] gi|83835975|gb|EAP75274.1| porphobilinogen deaminase [Roseovarius nubinhibens ISM] Length = 304 Score = 351 bits (902), Expect = 6e-95, Method: Composition-based stats. Identities = 131/302 (43%), Positives = 183/302 (60%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR SPLALA A+ETR L+ +P I+ ++T GDR+ +R L EIGGKGLFT Sbjct: 1 MKIGTRGSPLALAQAYETRDRLVAAFDLPETAFEIVIITTTGDRVIDRPLKEIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EIE L++G+ID AVHS KDMP +GL I YLPRED+RD FI T ++L ++A + Sbjct: 61 REIEDALLTGDIDLAVHSMKDMPVLQPEGLIIDCYLPREDVRDAFICPTGRNLSEMAPGT 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G+SSLRR+A +L + V++FRG ++TRL KL+ A LA AG+ RLK+ +VI Sbjct: 121 KVGSSSLRRRAQVLVAHPQLEVVEFRGNVQTRLRKLDEGVAACTFLAMAGLNRLKRTEVI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L E+ P+ QGAI IE ++ A +++ I+H T + ERAFLA LDGSC+ Sbjct: 181 TRALEPEEMLPAVAQGAIGIERRRDDSGAAMMLEAIHHGPTGQRLAAERAFLAALDGSCE 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG A +G TL G +L DG R+ D +GR A + + + F Sbjct: 241 TPIAGLAELQGGTLRLRGEILRPDGSERLCDDRSAPVEDGAELGRAMAVDLLAQAGPDFF 300 Query: 306 NF 307 ++ Sbjct: 301 DW 302 >gi|74181545|dbj|BAE30038.1| unnamed protein product [Mus musculus] Length = 360 Score = 351 bits (902), Expect = 6e-95, Method: Composition-based stats. Identities = 108/336 (32%), Positives = 157/336 (46%), Gaps = 34/336 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + L ++ P II +ST GD+I + L++IG K L Sbjct: 19 RVIRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 77 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLET 136 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 137 LPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRM 196 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 197 GWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRH 256 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK----------IFHEVSRNGNRCD----- 284 L+G C +A K LY G V + DG I V +G D Sbjct: 257 LEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQEDGPEDDPQLVG 316 Query: 285 -------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 317 ITARNIPRGAQLAAENLGISLASLLLNKGAKNILDV 352 >gi|282916930|ref|ZP_06324688.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus D139] gi|283770735|ref|ZP_06343627.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus H19] gi|282319417|gb|EFB49769.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus D139] gi|283460882|gb|EFC07972.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus H19] Length = 308 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 167/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGL Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L Sbjct: 60 FVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DG Sbjct: 180 DIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++ Sbjct: 240 SCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKKVSNKLKEQGA 297 Query: 302 KNVF 305 + Sbjct: 298 YEII 301 >gi|258424087|ref|ZP_05686969.1| porphobilinogen deaminase [Staphylococcus aureus A9635] gi|257845708|gb|EEV69740.1| porphobilinogen deaminase [Staphylococcus aureus A9635] Length = 308 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 168/304 (55%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGL Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L +L Sbjct: 60 FVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSELPE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DG Sbjct: 180 DIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++ Sbjct: 240 SCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKKVSNKLKEQGA 297 Query: 302 KNVF 305 + Sbjct: 298 YEII 301 >gi|84516581|ref|ZP_01003940.1| porphobilinogen deaminase [Loktanella vestfoldensis SKA53] gi|84509617|gb|EAQ06075.1| porphobilinogen deaminase [Loktanella vestfoldensis SKA53] Length = 314 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 134/302 (44%), Positives = 179/302 (59%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 PF IGTR SPLALA A ETR+ LM +P I+ + GD I +R L +IGGKGLF Sbjct: 11 PFNIGTRGSPLALAQAHETRARLMAAFDLPQDAFAIVVIKVMGDAIQDRALKDIGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE L+ G ID AVHS KDMP + GL + YLPRED+RD F+S TA+ L DL Sbjct: 71 TREIEDALLDGSIDIAVHSMKDMPVEQPSGLLLDTYLPREDVRDAFVSLTARGLDDLEHG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR++ LL R D++V++FRG ++TRL KL N A A LA AG+ RL V Sbjct: 131 ATVGTSSLRRRSQLLVRRPDLNVVEFRGNVQTRLMKLGNGVAEATFLAMAGLNRLNMTDV 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + ED P+ QGAI IE ++ +A +++ I+H T + ER+FLA LDGSC Sbjct: 191 PRTAIAPEDMLPAIAQGAIGIERRADDSRAAAMLEAIHHGPTGQRLAAERSFLAHLDGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ I G A G TL G +L +DG G D ++GR+ A + + Sbjct: 251 QTPIGGLADLDGGTLRLRGEILRTDGSQVLADDMIGAIADGADMGREMAVKLLEKAGPGF 310 Query: 305 FN 306 F+ Sbjct: 311 FD 312 >gi|319400986|gb|EFV89205.1| porphobilinogen deaminase [Staphylococcus epidermidis FRI909] Length = 308 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 101/304 (33%), Positives = 173/304 (56%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L P +I I + TKGD+I ++ L+++GGKGL Sbjct: 2 RKLIVGSRRSKLALTQSQQFIDKLK--FIDPSLDIEIKEIVTKGDKIVDKQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L + EID A+HS KD+P+ + GL + RE D +I+ L++L+ Sbjct: 60 FVKEIQNELFNKEIDMAIHSLKDVPSIIPDGLTLGCIPDREIPFDAYIAKNHIPLEELSE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ Sbjct: 120 GSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSD 179 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ L+ + P+ GQGA+ IE ++ + +L+ +++ D V ER FL+E+DG Sbjct: 180 NIVTTYLDRDVLLPAIGQGALGIECRSDDKELLDLLTKVHNHDVAQCVTAERTFLSEMDG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ I G+A + + + F G++++ DGK +E + G+ D + +G + +Q ++ Sbjct: 240 SCQVPIGGYATIVQDNQIEFTGLIMSPDGKERYEHTTLGS--DPVQLGIEVSQVLKKQGA 297 Query: 302 KNVF 305 ++ Sbjct: 298 YDII 301 >gi|296216375|ref|XP_002754553.1| PREDICTED: porphobilinogen deaminase [Callithrix jacchus] Length = 361 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K L Sbjct: 19 RVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 77 FTKELEHALERNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 136 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 196 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + +IL+ E+ + GQGA+ +E + ++V V++ +T ERAFL Sbjct: 197 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDMVGVLHDPETLLRCIAERAFLRH 256 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 257 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQDTMQATIHVPAQHEDGPEDDPQLV 316 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 317 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDI 353 >gi|114705601|ref|ZP_01438504.1| porphobilinogen deaminase [Fulvimarina pelagi HTCC2506] gi|114538447|gb|EAU41568.1| porphobilinogen deaminase [Fulvimarina pelagi HTCC2506] Length = 316 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 137/303 (45%), Positives = 194/303 (64%), Gaps = 1/303 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR SPLALA A E R+ L+ H + + I +ST GDRI +R L+E+GGKGLF Sbjct: 7 IIRIGTRGSPLALAQASEVRARLIAAHGLTEDDFAIEVISTSGDRILDRPLSEVGGKGLF 66 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+EIE L+ ID AVHS+KDM T + GL I+A+L RED+RD FI A++L DL Sbjct: 67 TKEIEAALLDRRIDLAVHSSKDMATAIPDGLAITAFLEREDVRDAFIGRDAKTLADLPEG 126 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G++SLRR+AL+ R R D++ I FRG ++TRL KL +A A LLA AG+ R++ + Sbjct: 127 ATVGSASLRRQALIKRLRPDLNTIIFRGNVQTRLRKLGEGQADATLLALAGLNRMEMQHH 186 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 +IL EDFPP+PGQGAICIE+ + + + LV I H++T +++ ERAFL LDGSC Sbjct: 187 ATDILEPEDFPPAPGQGAICIESRQGDTRIENLVSAIVHDETSIALHAERAFLKVLDGSC 246 Query: 245 KSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 ++ IA A + F+G++L DG HEV G+ A+ +G A + + + + Sbjct: 247 RTPIAARAVLWDSGRIAFHGMILRPDGTEVHEVHDEGDADGAVALGERAGRSVLEAAGPH 306 Query: 304 VFN 306 F+ Sbjct: 307 FFD 309 >gi|294676723|ref|YP_003577338.1| hydroxymethylbilane synthase [Rhodobacter capsulatus SB 1003] gi|12280937|gb|AAG50298.1| porphobilinogen deaminase [Rhodobacter capsulatus] gi|294475543|gb|ADE84931.1| hydroxymethylbilane synthase [Rhodobacter capsulatus SB 1003] Length = 317 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 126/307 (41%), Positives = 179/307 (58%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA AFETRS LM +P I+ + T GD ++ L E+GG Sbjct: 10 PLKIGTRGSPLALAQAFETRSRLMAAFDLPEEAFEIVVIKTSGDNAALIAADKPLKEVGG 69 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ +++G ID AVHS KDMPT +GL + YLPRED RD F+S SL + Sbjct: 70 KGLFTKEIEEAMLAGSIDIAVHSMKDMPTLQPEGLILDCYLPREDTRDAFVSMKYNSLAE 129 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A L R D+ +++FRG ++TR+ KL A A LA AG+ RL Sbjct: 130 LPEGAVVGTSSLRRRAQLAARRPDLKMVEFRGNVQTRMKKLGEGVADATFLALAGLNRLG 189 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +V K + ED P+ QG I IE + +A+ L+ I+H + + CER+FL L Sbjct: 190 MSEVAKSAIEPEDMLPAVAQGCIGIERREADTRAKMLLDAIHHAPSGLRLACERSFLLTL 249 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ I G + +G ++ G +L DG G D + +G + A+ + + Sbjct: 250 DGSCETPIGGLSVLEGDQIWLRGEILRPDGSETITGEIRGPAADGVALGAELAKQLLAKA 309 Query: 301 NKNVFNF 307 + F + Sbjct: 310 PADFFCW 316 >gi|260425851|ref|ZP_05779830.1| porphobilinogen deaminase [Citreicella sp. SE45] gi|260420343|gb|EEX13594.1| porphobilinogen deaminase [Citreicella sp. SE45] Length = 319 Score = 351 bits (901), Expect = 7e-95, Method: Composition-based stats. Identities = 136/308 (44%), Positives = 185/308 (60%), Gaps = 4/308 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT----NRTLTEIG 59 +P RIGTR SPLALA A ETR L D + P I+ + T GD + +R L EIG Sbjct: 10 QPLRIGTRGSPLALAQAHETRDRLCDTFALSPEAFEIVVIRTTGDDRSMIAADRPLKEIG 69 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 KGLFT+EIE++L++G ID AVHS KDMPT +GL + YLPRED+RD FIS L Sbjct: 70 NKGLFTKEIEEQLMTGGIDIAVHSMKDMPTLQPEGLMLDCYLPREDVRDAFISPGHGGLG 129 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A A LA AG+ R+ Sbjct: 130 DLPAGTVVGTSSLRRRAQLLNRRPDLRVVEFRGNLQTRLKKLEDGVAAATFLAMAGLNRM 189 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 ++ ++ ++ P+ QGAI IE ++ +A E++ I+ DT + ERAFLAE Sbjct: 190 GMTQLPMTAMSPDEMLPAVAQGAIGIERRSDDSRAAEMLAAIHDRDTALRLGAERAFLAE 249 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 LDGSC++ IAG A G+ L G +LA DG H G + +GR AQ + Sbjct: 250 LDGSCETPIAGLAELDGTALRLRGELLAPDGSASHAGEIAGPADNGPELGRLLAQQLLAR 309 Query: 300 SNKNVFNF 307 + + F + Sbjct: 310 AGADFFAW 317 >gi|86139102|ref|ZP_01057673.1| porphobilinogen deaminase [Roseobacter sp. MED193] gi|85824333|gb|EAQ44537.1| porphobilinogen deaminase [Roseobacter sp. MED193] Length = 319 Score = 351 bits (901), Expect = 7e-95, Method: Composition-based stats. Identities = 129/307 (42%), Positives = 176/307 (57%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A+ETR L + +P I+ + T GD ++ L E+GG Sbjct: 11 PLKIGTRGSPLALAQAYETRRRLAEAFDLPHEAFEIVVIKTSGDNQALIAADKPLKELGG 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+SG ID AVHS KDMP +GL + YLPRED+RD F+S L+D Sbjct: 71 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVAQPEGLLLDCYLPREDVRDAFVSPKFSRLQD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A L+ R D+ V++FRG ++TRL KLN A LA AG+ RL Sbjct: 131 LEPGAVVGTSSLRRRAQLMNRRPDLKVVEFRGNVQTRLKKLNEGVAECTFLAMAGLNRLA 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V + D P+ QGAI IE ++ + +++ I+ T + ERAFLA L Sbjct: 191 MADVPATAIETNDMLPAVAQGAIGIERRGDDSRTAAMLEAIHDVTTGKRLAAERAFLAAL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A G TL G VL DG ++ D +GR+ A + + Sbjct: 251 DGSCETPIAGLAELDGGTLRLRGEVLRPDGSEALAEDQSCAIEDGGELGREMAAKLLATA 310 Query: 301 NKNVFNF 307 F++ Sbjct: 311 GPGFFDW 317 >gi|262163679|ref|ZP_06031420.1| porphobilinogen deaminase [Vibrio mimicus VM223] gi|262027895|gb|EEY46559.1| porphobilinogen deaminase [Vibrio mimicus VM223] Length = 271 Score = 351 bits (901), Expect = 8e-95, Method: Composition-based stats. Identities = 97/264 (36%), Positives = 146/264 (55%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 + T+GD I + L ++GGKGLF +E+E ++ G D AVHS KD+P +GL + Sbjct: 1 MVTRGDVILDTPLAKVGGKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICE 60 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 RED RD F+S+T + DL +V+GT SLRR+ L R D+ + + RG + TRL+KL+ Sbjct: 61 REDPRDAFVSNTYAKIDDLPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLD 120 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 + AI+LA AG+KRL+ E I+ + E P+ GQGA+ IE +++ + +EL+ +N Sbjct: 121 AGEYDAIILAAAGLKRLELESRIRSFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLN 180 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 H DT D V CERA L G C+ I +A G ++ +V DG G R Sbjct: 181 HTDTADRVRCERAMNLTLQGGCQVPIGSYALLDGDEIWLRALVGEPDGSQIVRGEIRGPR 240 Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306 +A +G A+ + K + Sbjct: 241 SEAEQLGITLAEQLLGQGAKEILE 264 >gi|57650542|ref|YP_186555.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus COL] gi|87160322|ref|YP_494312.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195475|ref|YP_500279.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221776|ref|YP_001332598.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus str. Newman] gi|161509889|ref|YP_001575548.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142579|ref|ZP_03567072.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253732321|ref|ZP_04866486.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253734545|ref|ZP_04868710.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus TCH130] gi|258451815|ref|ZP_05699837.1| porphobilinogen deaminase [Staphylococcus aureus A5948] gi|262048646|ref|ZP_06021529.1| porphobilinogen deaminase [Staphylococcus aureus D30] gi|262052244|ref|ZP_06024449.1| porphobilinogen deaminase [Staphylococcus aureus 930918-3] gi|282920211|ref|ZP_06327936.1| porphobilinogen deaminase [Staphylococcus aureus A9765] gi|284024719|ref|ZP_06379117.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 132] gi|294848692|ref|ZP_06789438.1| porphobilinogen deaminase [Staphylococcus aureus A9754] gi|304380738|ref|ZP_07363407.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|11386773|sp|O34090|HEM3_STAA8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|71152114|sp|Q5HFA2|HEM3_STAAC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123749605|sp|Q2FG66|HEM3_STAA3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|172048933|sp|A6QHK4|HEM3_STAAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189028161|sp|A8Z2J1|HEM3_STAAT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|2589181|gb|AAC45833.1| porphobilinogen deaminase [Staphylococcus aureus] gi|57284728|gb|AAW36822.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus COL] gi|87126296|gb|ABD20810.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203033|gb|ABD30843.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374576|dbj|BAF67836.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus str. Newman] gi|160368698|gb|ABX29669.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253723959|gb|EES92688.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253727486|gb|EES96215.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus TCH130] gi|257860527|gb|EEV83353.1| porphobilinogen deaminase [Staphylococcus aureus A5948] gi|259159845|gb|EEW44884.1| porphobilinogen deaminase [Staphylococcus aureus 930918-3] gi|259163293|gb|EEW47852.1| porphobilinogen deaminase [Staphylococcus aureus D30] gi|269941151|emb|CBI49538.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus TW20] gi|282594559|gb|EFB99544.1| porphobilinogen deaminase [Staphylococcus aureus A9765] gi|294824718|gb|EFG41141.1| porphobilinogen deaminase [Staphylococcus aureus A9754] gi|302751497|gb|ADL65674.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340737|gb|EFM06668.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315198635|gb|EFU28963.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus CGS01] gi|320140451|gb|EFW32305.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MRSA131] gi|320143989|gb|EFW35758.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MRSA177] gi|329314344|gb|AEB88757.1| Porphobilinogen deaminase [Staphylococcus aureus subsp. aureus T0131] gi|329728357|gb|EGG64794.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus 21189] gi|329733184|gb|EGG69521.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus 21193] Length = 308 Score = 351 bits (901), Expect = 8e-95, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 168/304 (55%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGL Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L Sbjct: 60 FVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DG Sbjct: 180 DIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ IAG+A + + F G+++ DGK E + NG D + +G+ + ++ Sbjct: 240 SCQVPIAGYATISDQNEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKTVSNKLKEQGA 297 Query: 302 KNVF 305 + Sbjct: 298 YEII 301 >gi|319942681|ref|ZP_08016988.1| hydroxymethylbilane synthase [Sutterella wadsworthensis 3_1_45B] gi|319803764|gb|EFW00699.1| hydroxymethylbilane synthase [Sutterella wadsworthensis 3_1_45B] Length = 309 Score = 351 bits (901), Expect = 8e-95, Method: Composition-based stats. Identities = 98/298 (32%), Positives = 159/298 (53%), Gaps = 2/298 (0%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR SPLA+ A ++ L D + P + ++ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 9 IATRESPLAMWQALHVQALLRD--RYPGAEVELLGMTTRGDQILDRTLSKVGGKGLFVKE 66 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E ++ G D AVHS KD+P +L +G ++ A RED RD F+S SL D+ + + Sbjct: 67 LEAAMLEGRADLAVHSLKDVPMELPEGFELVAVSEREDPRDAFVSPKYASLDDMPAGARV 126 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+SLRR+ +L + V+ RG + TRL KL+ + A+++A AG+KRL I++ Sbjct: 127 GTASLRRELMLRMRYPHLEVLPVRGNVGTRLRKLDEGQFDALVMASAGLKRLGLGDRIRQ 186 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 I+ E P+PGQGA+ IE + K + + IN +T ERA L GSC+ Sbjct: 187 IIPAEVSLPAPGQGALGIEIRKGDEKMEAALGFINSPETRACCMAERAVSRALGGSCQVP 246 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A +A + L+ +V G + + + +R ++ Sbjct: 247 LAAYAVVENGELWLRALVGNHKEGKAAFTQARGPLAEPEALAARVVEDLRRQGAEDYL 304 >gi|302342250|ref|YP_003806779.1| porphobilinogen deaminase [Desulfarculus baarsii DSM 2075] gi|301638863|gb|ADK84185.1| porphobilinogen deaminase [Desulfarculus baarsii DSM 2075] Length = 310 Score = 351 bits (901), Expect = 8e-95, Method: Composition-based stats. Identities = 117/301 (38%), Positives = 154/301 (51%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LALA A L + P + + TKGD+I + L ++GGKGLF Sbjct: 3 KLIIATRGSELALAQARWAARQLSAL--SPGLEVELQLFKTKGDKILDAPLAKVGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE L+ G AVHS KDMP +L GL I+A RED RDV IS L +L Sbjct: 61 VKEIEDALLDGRARVAVHSMKDMPAELPPGLCIAAVSRREDPRDVLISRDGLGLDELPAT 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +GTSSLRR+A LL R D V+ RG ++TRL KL AI+LA AG+ RL Sbjct: 121 PRLGTSSLRRQAQLLARRPDAMVVSVRGNVQTRLRKLEELGLDAIVLAAAGLDRLGLSDP 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + L E P+ GQGA+ IE ++ EL + H+ T +V ERAFL L+G C Sbjct: 181 RRVDLAPELMLPAVGQGALAIEARADDAFCLELCARLAHQPTAVAVEAERAFLGRLEGGC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + IAG A G + F G+V + DGK G +A +G A+ I + + Sbjct: 241 QVPIAGHAVVDGDEIVFEGLVASLDGKRLIRRRAVGRADEAGPLGLAVAEEILADGGRQI 300 Query: 305 F 305 Sbjct: 301 L 301 >gi|289550573|ref|YP_003471477.1| Porphobilinogen deaminase [Staphylococcus lugdunensis HKU09-01] gi|289180105|gb|ADC87350.1| Porphobilinogen deaminase [Staphylococcus lugdunensis HKU09-01] Length = 310 Score = 351 bits (901), Expect = 9e-95, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 172/304 (56%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L +++ P I I + TKGD+I ++ L+++GGKGL Sbjct: 2 RKLVVGSRRSKLALTQSKQFIDKLKEIN--PDLEIEIKEIVTKGDQILDKQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L + EID A+HS KD+P+ L +GL + RE+ D +I+ L L Sbjct: 60 FVKEIQHELFNKEIDFAIHSLKDVPSILPEGLTLGCIPDRENPFDAYIAKNHTPLDQLPD 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 S+IGTSSLRR A +L ++ + RG I+TRL+KL AI+LA AG+KR+ + Sbjct: 120 GSIIGTSSLRRGAQILAKYPNLEIKWIRGNIDTRLHKLETENYDAIILAAAGLKRMGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ L+ + P+ GQGA+ IE ++ + L+K ++++ D V ER FLA +DG Sbjct: 180 DIVTTYLDKDVLLPAIGQGALGIECRSDDVELLALLKQVHNQQVADCVTAERTFLAAMDG 239 Query: 243 SCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ I G+A K + F G+++ DGK +E + +GN + I +G + + Sbjct: 240 SCQVPIGGYAMNKPNGDIEFTGLIMTPDGKERYEHTESGN--NPIELGNKVSDVLIEQGA 297 Query: 302 KNVF 305 + Sbjct: 298 YEII 301 >gi|311031438|ref|ZP_07709528.1| porphobilinogen deaminase [Bacillus sp. m3-13] Length = 310 Score = 351 bits (901), Expect = 9e-95, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 168/305 (55%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + P + + + TKGD+I + TL+++GGKGL Sbjct: 2 RKIIVGSRRSKLALTQTNWVIDQLKALGA--PFDFEVKEIVTKGDQILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ ++ +ID AVHS KDMP L +GL I RED RD FIS DL Sbjct: 60 FVKEIEQAMLDKDIDMAVHSMKDMPAVLPEGLTIGCIPFREDHRDAFISKDHVKFADLPS 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 S++GTSSLRR A LL R D+ + RG I+TRL KL N AI+LA AG+ R+ + Sbjct: 120 GSIVGTSSLRRGAQLLAKRPDLEIKWIRGNIDTRLAKLQNEDYDAIILAAAGLARMGWSK 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L+ + P+ GQGA+ IE ++ E++K+ T +V ERAFL +++G Sbjct: 180 DVVTEFLDEDLCLPAVGQGALSIECREDDADLLEVLKLFTDSVTEKAVIAERAFLHKMEG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAGFA + L +V A DG + ++ G D + +G +AA+ + Sbjct: 240 GCQVPIAGFASVGQDDNLTLTVLVGAPDGSVLYKERITGT--DPVKVGLEAAESLTAQGG 297 Query: 302 KNVFN 306 K + + Sbjct: 298 KKIID 302 >gi|208435725|pdb|3ECR|A Chain A, Structure Of Human Porphobilinogen Deaminase gi|208435726|pdb|3ECR|B Chain B, Structure Of Human Porphobilinogen Deaminase Length = 364 Score = 351 bits (901), Expect = 9e-95, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA ++L + P II +ST GD+I + L++IG K L Sbjct: 22 RVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 79 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 80 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 139 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 140 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 199 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 200 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 259 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 260 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLV 319 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 320 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 356 >gi|114770079|ref|ZP_01447617.1| porphobilinogen deaminase [alpha proteobacterium HTCC2255] gi|114548916|gb|EAU51799.1| porphobilinogen deaminase [alpha proteobacterium HTCC2255] Length = 307 Score = 351 bits (901), Expect = 9e-95, Method: Composition-based stats. Identities = 119/301 (39%), Positives = 172/301 (57%), Gaps = 1/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P IGTR SPLALA A ET L+ + I + T GD+I +R L+E+GGKGLF Sbjct: 8 PLVIGTRGSPLALAQAHETMGRLIRSTGLDESCFKITVIKTSGDKIQDRPLSEVGGKGLF 67 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+EIE ++ ID AVHS KDMP +GL++S YLPRED+RD FIS +++ +L Sbjct: 68 TKEIEDAMLDYGIDIAVHSMKDMPVICPEGLKLSCYLPREDVRDSFISTKYKNINELPKG 127 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A LL R D+ +++FRG ++TRL KLN A A LA AG+ RL + ++ Sbjct: 128 ATVGTSSLRRRAQLLNKRPDLKIVEFRGNVQTRLRKLNEGVAEATFLACAGLNRLGRNEI 187 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + +D P+ QG I IE + + E++ IN + + ER LAELDGSC Sbjct: 188 -SNPIEPDDMLPAIAQGCIGIEQREGDTEIAEILTKINDKSASLRLAAERTLLAELDGSC 246 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A G + G V+ DG + + + + + A+ +R ++ Sbjct: 247 QTPIAGLAELDGQKMRLRGEVIRPDGSEVLKDEIICHVNEGVEMASGMAKRLRDQMGEDF 306 Query: 305 F 305 F Sbjct: 307 F 307 >gi|148655885|ref|YP_001276090.1| porphobilinogen deaminase [Roseiflexus sp. RS-1] gi|166217784|sp|A5UU37|HEM3_ROSS1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|148567995|gb|ABQ90140.1| hydroxymethylbilane synthase [Roseiflexus sp. RS-1] Length = 303 Score = 351 bits (901), Expect = 9e-95, Method: Composition-based stats. Identities = 102/303 (33%), Positives = 163/303 (53%), Gaps = 3/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ IGTR S LAL + R +L H P + + ++T+GD I +R L IG KG Sbjct: 2 KQTLIIGTRASKLALVQTYMVRDALQSAH--PGLTVAVEHITTRGDIILDRPLNAIGDKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF EIE+ + +G ID AVHSAKD+P+ L + ++A R D RD ++ +L L Sbjct: 60 LFVVEIEEAMRAGRIDLAVHSAKDLPSVLPPDMTLAACPRRADPRDALVAQPGMTLAALP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR L R D++++D RG ++TRL KL + AI+LA AG+KRL + Sbjct: 120 SGARVGTSSLRRACQLRALRPDLTLVDLRGNVDTRLRKLREGQYDAIVLAAAGLKRLGLD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E++ + P+ GQG I +E ++ + L+ ++ + ++ ERAFLA + G Sbjct: 180 GAISELIEPDVLIPAVGQGVIGVEARADDEEVLRLLAPLDDQAARIAITAERAFLARIGG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ + A+ +G L G++ A DG+ + G+ D + +G A + + Sbjct: 240 GCQVPVGALAHLEGDELLLRGMIGARDGR-MVRGMQRGSASDPVGLGCALADELLDQGGR 298 Query: 303 NVF 305 + Sbjct: 299 ALL 301 >gi|148358525|ref|YP_001249732.1| porphobilinogen deaminase [Legionella pneumophila str. Corby] gi|148280298|gb|ABQ54386.1| porphobilinogen deaminase [Legionella pneumophila str. Corby] Length = 321 Score = 350 bits (900), Expect = 9e-95, Method: Composition-based stats. Identities = 105/306 (34%), Positives = 160/306 (52%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A R L V + P +I ++P+ T GDR L GG Sbjct: 13 MSAKIIRIATRQSPLALWQANHVRKML--VKQWPNLSIELLPMITSGDRFLKDKLLSAGG 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL Sbjct: 71 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLLLAAICKRDNPFDALISPQFKSLDA 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++IGTSSLRR++ LL + ++ + RG I TRL+KL + + AI+LA AG++R+ Sbjct: 131 LPKNAIIGTSSLRRQSQLLAYNPNLQIKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ + P+ QGA+CIE ++ + QEL+ +N + V+ ER A+L Sbjct: 191 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELIHGLNDPISALCVHTERRVNAKL 250 Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G+C A + + L VL DG + + G +A I + + Sbjct: 251 GGNCHIPFAVYCTITEEKRLLLRAKVLNMDGSQMIDDEQQGKIAEAEVIADRCTESLMTK 310 Query: 300 SNKNVF 305 ++ Sbjct: 311 GAMSLL 316 >gi|160872858|ref|ZP_02062990.1| porphobilinogen deaminase [Rickettsiella grylli] gi|159121657|gb|EDP46995.1| porphobilinogen deaminase [Rickettsiella grylli] Length = 311 Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 125/308 (40%), Positives = 172/308 (55%), Gaps = 5/308 (1%) Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M KK RI TR SPLA A ++ L + P I ++P T+GDR ++ +L + G Sbjct: 1 MSKKKFLRIATRKSPLAYWQATSIKNQLEKI--FPFLKITLLPFVTEGDRPSH-SLNQWG 57 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E L+ G+ D AVHS KD+P L KGL + A R D RDV IS + + Sbjct: 58 GKGLFVKELEAALLHGQADIAVHSLKDLPMTLEKGLVLGAICKRCDPRDVLISRSDRLFT 117 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L S +GTSSLRR++ LL R D+ + RG I TRLNKL + AI+LA AG+ RL Sbjct: 118 QLPPGSYVGTSSLRRQSQLLALRPDLKIGVLRGNIGTRLNKLAAGEFDAIILAAAGLIRL 177 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 KK + I E I+ F P+PGQGA+ IE H N+ ++ + + H T V ERA E Sbjct: 178 KKTECISEYFEIDHFLPAPGQGALGIECHENDEESLTYISALIHPITHSCVLAERALSRE 237 Query: 240 LDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L G C+ +A +A G + V +SDG +V + G R +A IG AAQ +R Sbjct: 238 LGGGCQVPLAAYAASLGQDFIRLQAFVGSSDGTTQIKVEKQGPRVEAEKIGFLAAQDLRA 297 Query: 299 ISNKNVFN 306 + + + N Sbjct: 298 LGVEEILN 305 >gi|254474607|ref|ZP_05087993.1| porphobilinogen deaminase [Ruegeria sp. R11] gi|214028850|gb|EEB69685.1| porphobilinogen deaminase [Ruegeria sp. R11] Length = 320 Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 132/307 (42%), Positives = 180/307 (58%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A+ETR+ L +P I+ + T GD ++ L E+GG Sbjct: 12 PLKIGTRGSPLALAQAYETRARLAAAFDLPDDAFEIVVIKTTGDNQALIAADKPLKELGG 71 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+SG ID AVHS KDMP + GL + YLPRED+RD FIS + S+ D Sbjct: 72 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVQQPDGLVLDTYLPREDVRDAFISPSLTSIHD 131 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LA +V+GTSSLRR+A LL R D++V+ FRG ++TRL KL+ A LA AG+ RL Sbjct: 132 LAKGAVVGTSSLRRRAQLLHRRPDLNVVQFRGNVQTRLRKLSEGVAECTFLAMAGLNRLA 191 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V + D P+ QGAI IE ++ +A +++ I+ + T + ERAFLA L Sbjct: 192 MADVPANAIETNDMLPAVAQGAIGIERRTSDNRAADMLAAIHDQQTGQRLAAERAFLAAL 251 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A G+TL G VL DG + D +GR A + + Sbjct: 252 DGSCETPIAGLAELDGTTLRLRGEVLRPDGSEAISDDQRCPIEDGAELGRAMAAKLLDQA 311 Query: 301 NKNVFNF 307 + F++ Sbjct: 312 GEGFFDW 318 >gi|34101365|gb|AAQ57734.1| porphobilinogen deaminase [Chromobacterium violaceum ATCC 12472] Length = 295 Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 106/286 (37%), Positives = 159/286 (55%), Gaps = 2/286 (0%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + A ++ L ++ P + I+ ++T+GD+I ++TL++IGGKGLF +E+E+ L+ G Sbjct: 1 MWQAEHIQARLQALY--PHLTVEILGMTTQGDQILDKTLSKIGGKGLFVKELEQALMDGR 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 D AVHS KD+P L G ++A RED RD F+S+ Q L +L SV+GTSSLRR+A Sbjct: 59 ADLAVHSLKDVPMTLPDGFALAAVCEREDPRDAFVSNRYQHLSELPAGSVVGTSSLRREA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 L ++V RG ++TRL KL++ + AI+LA AG+KRL + I+ L + P Sbjct: 119 QLRARFPQLAVKPLRGNVQTRLKKLDDGEFDAIILAAAGLKRLGLAERIQGELAPSESLP 178 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + GQGA+ IE + L+ +NH DT ERA EL GSC+ + FA Sbjct: 179 AAGQGALGIEIRADRADLSALLAPLNHPDTRACTAAERALAKELGGSCQVPLGAFATLAD 238 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 TL G+V DG + S +G A +GR A+ + + Sbjct: 239 GTLTLGGLVAHPDGSVVLTASASGPADYADALGRAVAKKLIDAGAR 284 >gi|159110431|ref|NP_038579.2| porphobilinogen deaminase isoform 1 [Mus musculus] gi|74177773|dbj|BAE38979.1| unnamed protein product [Mus musculus] gi|74198532|dbj|BAE39746.1| unnamed protein product [Mus musculus] Length = 361 Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + L ++ P II +ST GD+I + L++IG K L Sbjct: 19 RVIRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 77 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLET 136 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 137 LPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRM 196 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 197 GWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRH 256 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 257 LEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLV 316 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 317 GITARNIPRGAQLAAENLGISLASLLLNKGAKNILDV 353 >gi|159110463|ref|NP_001103721.1| porphobilinogen deaminase isoform 2 [Mus musculus] gi|74138074|dbj|BAE25434.1| unnamed protein product [Mus musculus] Length = 344 Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + L ++ P II +ST GD+I + L++IG K L Sbjct: 2 RVIRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKSL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 60 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLET 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 120 LPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRM 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 180 GWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRH 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 240 LEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLV 299 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 300 GITARNIPRGAQLAAENLGISLASLLLNKGAKNILDV 336 >gi|298369901|ref|ZP_06981217.1| hydroxymethylbilane synthase [Neisseria sp. oral taxon 014 str. F0314] gi|298281361|gb|EFI22850.1| hydroxymethylbilane synthase [Neisseria sp. oral taxon 014 str. F0314] Length = 311 Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 102/306 (33%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL++IGG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFIKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPKGTIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + +++K +NH+ T V ERA L Sbjct: 179 LDERIRLILSEADSLPAAGQGALGIEIASHRTDLLDVLKPLNHDITRACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEEDGLLTLRGLVGHPDGSVILQADAQAPAAYADALGRAVAKKLADDG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 AQELIE 304 >gi|13277999|gb|AAH03861.1| Hydroxymethylbilane synthase [Mus musculus] Length = 361 Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + L ++ P II +ST GD+I + L++IG K L Sbjct: 19 RVIRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 77 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLET 136 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 L S +GTSSLRR A L R ++ RG + TRL KL+ + AI+LA AG++R+ Sbjct: 137 LPEKSAVGTSSLRRVAQLQRKFPNLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRM 196 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 197 GWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRH 256 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 257 LEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLV 316 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 317 GITARNIPRGAQLAAENLGISLASLLLNKGAKNILDV 353 >gi|83590097|ref|YP_430106.1| porphobilinogen deaminase [Moorella thermoacetica ATCC 39073] gi|123766782|sp|Q2RJ26|HEM3_MOOTA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|83573011|gb|ABC19563.1| hydroxymethylbilane synthase [Moorella thermoacetica ATCC 39073] Length = 313 Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 116/301 (38%), Positives = 164/301 (54%), Gaps = 2/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++G+R S LA A +L P + ++ L TKGD+I + L IG KGLFT Sbjct: 4 IKVGSRESELARWQARWVIQALEKA--WPGLSCRLVTLKTKGDKILDVALARIGDKGLFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G ID AVHS KDMPT L +GL I A PRED DV +S +L L + + Sbjct: 62 KELELALLDGAIDLAVHSMKDMPTTLPEGLVIGAIGPREDPADVLVSPEGYTLATLPIKA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRRKA L R D+ ++D RG + TRL K+ + AI+LA AG+KRL +V+ Sbjct: 122 RVGTSSLRRKAQLAYARPDLELVDLRGNVPTRLAKMERDGLTAIVLAAAGLKRLNHGQVL 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E + P+ GQGAI +E + + ELV INH T +V ERA+L L+G C+ Sbjct: 182 GEPIPYHICLPAVGQGAIGVEIRAGDRRVAELVAAINHPPTAAAVRAERAYLRALEGGCQ 241 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IA A + + L G+V + DG+ +G+ D GR+ A+ + + Sbjct: 242 VPIAALATVEDTALVLQGMVASLDGREMLRDIASGSTRDPEAAGRELARKLLARGAGEIL 301 Query: 306 N 306 Sbjct: 302 Q 302 >gi|387507|gb|AAA39891.1| porphobilinogen deaminase (erythroid sp.) [Mus musculus] Length = 344 Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 105/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + L ++ P II +ST GD+I + L++IG K L Sbjct: 2 RVIRVGTRKSQLARIQTETVVAMLKALY--PGIQFEIIAMSTTGDKIVDTALSKIGEKSL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A R++ D + H ++L+ Sbjct: 60 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRQNPCDAVVFHPKFIGKTLET 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 L S +GTSSLRR A L R ++ RG + TRL KL+ + AI+LA AG++R+ Sbjct: 120 LPEKSAVGTSSLRRVAQLQRKFPNLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRM 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 180 GWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRH 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 240 LEGGCSVPVAVHTVIKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLV 299 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 300 GITARNIPRGAQLAAENLGISLASLLLNKGAKNILDV 336 >gi|49483913|ref|YP_041137.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MRSA252] gi|257425786|ref|ZP_05602210.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 55/2053] gi|257428452|ref|ZP_05604850.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 65-1322] gi|257431086|ref|ZP_05607463.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 68-397] gi|257433769|ref|ZP_05610127.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus E1410] gi|257436685|ref|ZP_05612729.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus M876] gi|282904242|ref|ZP_06312130.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus C160] gi|282906067|ref|ZP_06313922.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Btn1260] gi|282908982|ref|ZP_06316800.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911298|ref|ZP_06319100.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus WBG10049] gi|282914467|ref|ZP_06322253.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus M899] gi|282919436|ref|ZP_06327171.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus C427] gi|282924813|ref|ZP_06332479.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus C101] gi|283958422|ref|ZP_06375873.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus A017934/97] gi|293503545|ref|ZP_06667392.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 58-424] gi|293510560|ref|ZP_06669265.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus M809] gi|293537102|ref|ZP_06671782.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus M1015] gi|295428242|ref|ZP_06820871.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590795|ref|ZP_06949433.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus MN8] gi|55976402|sp|Q6GG35|HEM3_STAAR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|49242042|emb|CAG40741.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MRSA252] gi|257271480|gb|EEV03626.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 55/2053] gi|257275293|gb|EEV06780.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 65-1322] gi|257278034|gb|EEV08682.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 68-397] gi|257281862|gb|EEV11999.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus E1410] gi|257284036|gb|EEV14159.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus M876] gi|282313179|gb|EFB43575.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus C101] gi|282317246|gb|EFB47620.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus C427] gi|282321648|gb|EFB51973.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus M899] gi|282324993|gb|EFB55303.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus WBG10049] gi|282327246|gb|EFB57541.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331359|gb|EFB60873.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Btn1260] gi|282595860|gb|EFC00824.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus C160] gi|283790571|gb|EFC29388.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus A017934/97] gi|290919947|gb|EFD97015.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus M1015] gi|291095211|gb|EFE25476.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 58-424] gi|291466451|gb|EFF08972.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus M809] gi|295127642|gb|EFG57279.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575681|gb|EFH94397.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus MN8] gi|298694941|gb|ADI98163.1| Porphobilinogen deaminase [Staphylococcus aureus subsp. aureus ED133] gi|312437871|gb|ADQ76942.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus TCH60] gi|315195573|gb|EFU25960.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus CGS00] Length = 308 Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 167/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGL Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L Sbjct: 60 FVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DG Sbjct: 180 DIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++ Sbjct: 240 SCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKKVSNKLKEQGA 297 Query: 302 KNVF 305 + Sbjct: 298 YEII 301 >gi|122844|sp|P22907|HEM3_MOUSE RecName: Full=Porphobilinogen deaminase; Short=PBG-D; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 361 Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 105/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + L ++ P II +ST GD+I + L++IG K L Sbjct: 19 RVIRVGTRKSQLARIQTETVVAMLKALY--PGIQFEIIAMSTTGDKIVDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A R++ D + H ++L+ Sbjct: 77 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRQNPCDAVVFHPKFIGKTLET 136 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 L S +GTSSLRR A L R ++ RG + TRL KL+ + AI+LA AG++R+ Sbjct: 137 LPEKSAVGTSSLRRVAQLQRKFPNLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRM 196 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 197 GWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRH 256 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 257 LEGGCSVPVAVHTVIKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLV 316 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 317 GITARNIPRGAQLAAENLGISLASLLLNKGAKNILDV 353 >gi|20149500|ref|NP_000181.2| porphobilinogen deaminase isoform 1 [Homo sapiens] gi|1170217|sp|P08397|HEM3_HUMAN RecName: Full=Porphobilinogen deaminase; Short=PBG-D; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|12653497|gb|AAH00520.1| Hydroxymethylbilane synthase [Homo sapiens] gi|14198180|gb|AAH08149.1| Hydroxymethylbilane synthase [Homo sapiens] gi|17939638|gb|AAH19323.1| Hydroxymethylbilane synthase [Homo sapiens] gi|119587851|gb|EAW67447.1| hydroxymethylbilane synthase, isoform CRA_a [Homo sapiens] gi|158261573|dbj|BAF82964.1| unnamed protein product [Homo sapiens] gi|312152370|gb|ADQ32697.1| hydroxymethylbilane synthase [synthetic construct] Length = 361 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA ++L + P II +ST GD+I + L++IG K L Sbjct: 19 RVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 136 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 196 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 197 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 256 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 257 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLV 316 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 317 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 353 >gi|301788448|ref|XP_002929638.1| PREDICTED: porphobilinogen deaminase-like isoform 1 [Ailuropoda melanoleuca] Length = 361 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + L + P I+ +ST GD+I + L++IG K L Sbjct: 19 RVIRVGTRKSQLARIQTDSVVAMLKAFY--PGLQFEIVAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLET 136 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQRM 196 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 197 GWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIAERAFLRH 256 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 257 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSMQETMQATIRVTAQLEDGPEDDPQLV 316 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 317 GITARNIPREAQLAAENLGISLASLLLNKGAKNILDV 353 >gi|301788450|ref|XP_002929639.1| PREDICTED: porphobilinogen deaminase-like isoform 2 [Ailuropoda melanoleuca] Length = 344 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + L + P I+ +ST GD+I + L++IG K L Sbjct: 2 RVIRVGTRKSQLARIQTDSVVAMLKAFY--PGLQFEIVAMSTTGDKILDTALSKIGEKSL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 60 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLET 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 120 LPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQRM 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 180 GWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIAERAFLRH 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 240 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSMQETMQATIRVTAQLEDGPEDDPQLV 299 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 300 GITARNIPREAQLAAENLGISLASLLLNKGAKNILDV 336 >gi|188585750|ref|YP_001917295.1| porphobilinogen deaminase [Natranaerobius thermophilus JW/NM-WN-LF] gi|229836110|sp|B2A1G7|HEM3_NATTJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|179350437|gb|ACB84707.1| porphobilinogen deaminase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 311 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 107/306 (34%), Positives = 166/306 (54%), Gaps = 7/306 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL L + P I I + TKGD++ N +L+++GGKGLF Sbjct: 2 KLRIGTRRSQLALDQTNWVVEQLKTHY--PDIEIEIKKIETKGDQLLNVSLSKVGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EI+ L+ GEID AVHS KD+PT+ + L+I A R D D IS+ ++ +L + Sbjct: 60 LKEIQNALLQGEIDLAVHSMKDIPTETTEDLEICAITKRVDPLDALISNNDITIDELPEN 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEK 183 + IGTSSLRR + L +R+D+ +I RG I TR+NKL + A++LA AG+ R Sbjct: 120 AKIGTSSLRRGSQLKAYRNDLQIIPIRGNINTRMNKLQELPELDAVVLAKAGLVRSGMTD 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + ++ E P PGQGA+ +E +N +E + V++ ++ ++ ERAFL L GS Sbjct: 180 SISQNISPEIIVPCPGQGALGLEIRHDNENLKEKLAVLDDSESRKAIGAERAFLNRLGGS 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD----AINIGRDAAQYIRFI 299 C + +A + L+ G+V + DG+ + S + D +G D A+ + + Sbjct: 240 CHVPVGAYAEIISNELHLTGVVASEDGQDVIKRSVQTHLSDNNKIPSTLGNDLAEELIEL 299 Query: 300 SNKNVF 305 + Sbjct: 300 GANKIL 305 >gi|315658068|ref|ZP_07910940.1| hydroxymethylbilane synthase [Staphylococcus lugdunensis M23590] gi|315496397|gb|EFU84720.1| hydroxymethylbilane synthase [Staphylococcus lugdunensis M23590] Length = 310 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 103/304 (33%), Positives = 170/304 (55%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L +++ P I I + TKGD+I ++ L+++GGKGL Sbjct: 2 RKLVVGSRRSKLALTQSKQFIDKLKEIN--PDLEIEIKEIVTKGDQILDKQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L + EID A+HS KD+P+ L +GL + RE+ D +I+ L L Sbjct: 60 FVKEIQHELFNKEIDFAIHSLKDVPSILPEGLTLGCIPDRENPFDAYIAKNHTPLDQLPD 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 S++GTSSLRR A +L ++ + RG I+TRL+KL AI+LA AG+KR+ + Sbjct: 120 GSIVGTSSLRRGAQILAKYPNLEIKWIRGNIDTRLHKLETENYDAIILAAAGLKRMGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ L+ + P+ GQGA+ IE ++ + L+ ++++ D V ER FLA +DG Sbjct: 180 DIVTTYLDKDVLLPAIGQGALGIECRSDDVELLALLNQVHNQQVADCVTAERTFLAAMDG 239 Query: 243 SCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ I G+A K + F G+++ DGK +E + GN + I +G + + Sbjct: 240 SCQVPIGGYATNKTNGDIEFTGLIMTPDGKERYEHTEIGN--NPIELGNKVSDVLIEQGA 297 Query: 302 KNVF 305 + Sbjct: 298 YEII 301 >gi|325291200|ref|YP_004267381.1| hydroxymethylbilane synthase [Syntrophobotulus glycolicus DSM 8271] gi|324966601|gb|ADY57380.1| hydroxymethylbilane synthase [Syntrophobotulus glycolicus DSM 8271] Length = 305 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 121/303 (39%), Positives = 175/303 (57%), Gaps = 5/303 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LA+ A + SL ++ P + V++P TKGD+I + L +IG KG Sbjct: 2 KTIRIGTRESKLAIWQAEWVKDSLTSIY--PGIDCVLVPKKTKGDKIPDIPLPKIGDKGF 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FTEE+E+ L++GEID AVHS KD+P +L +GL I+AY R D RDVF L +L Sbjct: 60 FTEELEQALLTGEIDLAVHSLKDLPVELPQGLSIAAYGERHDPRDVFFGKEGLPLAELPA 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA-ILLAYAGIKRLKKE 182 S+IGTSSLRR+ L R+D++ D RG ++TR +KL N++ A I+LA AG RL + Sbjct: 120 GSMIGTSSLRRQCQLKYQRADLNFCDLRGNLDTRWDKLQNSRDMAGIVLAAAGALRLGWQ 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E L + P+ GQG I IET + + +++++ +NH + + ER+FL L G Sbjct: 180 DRITEFLAEDVVLPAVGQGIIAIETASHRTEIRQILQPLNHRPSELAGRAERSFLRSLGG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C++ IA A + + G+V DGK +V+ G D G DAA I+ + Sbjct: 240 GCQTPIAALAKVQEDRIQVTGMVAGMDGKNILKVTAEGF--DPEQTGADAAAQIKCLGAN 297 Query: 303 NVF 305 N+ Sbjct: 298 NLL 300 >gi|27468263|ref|NP_764900.1| porphobilinogen deaminase [Staphylococcus epidermidis ATCC 12228] gi|57867145|ref|YP_188808.1| porphobilinogen deaminase [Staphylococcus epidermidis RP62A] gi|251811065|ref|ZP_04825538.1| hydroxymethylbilane synthase [Staphylococcus epidermidis BCM-HMP0060] gi|282875909|ref|ZP_06284776.1| hydroxymethylbilane synthase [Staphylococcus epidermidis SK135] gi|293366381|ref|ZP_06613060.1| hydroxymethylbilane synthase [Staphylococcus epidermidis M23864:W2(grey)] gi|38258087|sp|Q8CNY8|HEM3_STAES RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|71152115|sp|Q5HNN3|HEM3_STAEQ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|27315809|gb|AAO04944.1|AE016748_178 porphobilinogen deaminase [Staphylococcus epidermidis ATCC 12228] gi|57637803|gb|AAW54591.1| porphobilinogen deaminase [Staphylococcus epidermidis RP62A] gi|251805400|gb|EES58057.1| hydroxymethylbilane synthase [Staphylococcus epidermidis BCM-HMP0060] gi|281294934|gb|EFA87461.1| hydroxymethylbilane synthase [Staphylococcus epidermidis SK135] gi|291319506|gb|EFE59873.1| hydroxymethylbilane synthase [Staphylococcus epidermidis M23864:W2(grey)] gi|329733769|gb|EGG70095.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU045] gi|329737359|gb|EGG73613.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU028] Length = 308 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 101/304 (33%), Positives = 172/304 (56%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L P +I I + TKGD+I ++ L+++GGKGL Sbjct: 2 RKLIVGSRRSKLALTQSQQFIDKLK--FIDPSLDIEIKEIVTKGDKIVDKQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L + EID A+HS KD+P+ + GL + RE D +I+ L++L+ Sbjct: 60 FVKEIQNELFNKEIDMAIHSLKDVPSMIPDGLTLGCIPDREIPFDAYIAKNHIPLQELSE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ Sbjct: 120 GSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSD 179 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ L+ + P+ GQGA+ IE ++ + +L+ +++ D V ER FL+E+DG Sbjct: 180 NIVTTYLDRDILLPAIGQGALGIECRSDDKELLDLLSKVHNHDVAQCVTAERTFLSEMDG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ I G+A + + + F G++++ DGK +E + G D + +G + +Q ++ Sbjct: 240 SCQVPIGGYATIAQDNQIEFTGLIMSPDGKERYEHTALGT--DPVKLGIEVSQVLKKQGA 297 Query: 302 KNVF 305 ++ Sbjct: 298 YDII 301 >gi|73955044|ref|XP_546491.2| PREDICTED: similar to Porphobilinogen deaminase (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) (PBG-D) [Canis familiaris] Length = 361 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + L ++ P I+ +ST GD+I + L++IG K L Sbjct: 19 RVIRVGTRKSQLARIQTDSVVAMLKALY--PGLQFEIVAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLET 136 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDELQEFSAIILAAAGLQRM 196 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 197 GWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIAERAFLRH 256 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 257 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSMQETMQATIHITAQHEDGPEDDPQLV 316 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 317 GITARNIPREAQLAAENLGISLASLLLNKGAKNILDV 353 >gi|66933009|ref|NP_001019553.1| porphobilinogen deaminase isoform 2 [Homo sapiens] Length = 344 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA ++L + P II +ST GD+I + L++IG K L Sbjct: 2 RVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 60 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 120 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 180 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 240 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLV 299 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 300 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 336 >gi|145346959|ref|XP_001417948.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578176|gb|ABO96241.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 325 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 117/306 (38%), Positives = 175/306 (57%), Gaps = 6/306 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKG 62 +IGTR SPLALA A+ TR L + + + I + T GD++ ++ L +IGGKG Sbjct: 11 IVKIGTRGSPLALAQAYMTRDLLKENFPELAEDGALEICIIKTTGDKVLDQPLADIGGKG 70 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT E++ L+ G ID AVHS KD+PT L +G+ + LPRED+RD F+ SL L Sbjct: 71 LFTRELDDALLDGRIDIAVHSMKDVPTYLPEGMVLPCMLPREDVRDAFLCLKYDSLSQLP 130 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GT+SLRR++ LL + ++FRG +++R+ KL LLA AG+KR+ Sbjct: 131 EGAVVGTASLRRQSQLLYKFPTLKCVNFRGNVQSRIRKLKEEVVDCTLLAIAGLKRMDLA 190 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + K I+ E+ P+ QGAI I + K + +NHEDT +V ER+FLA LDG Sbjct: 191 QHAKVIIPTEEMLPAVAQGAIGITCRAGDDKQLAFLAKLNHEDTRMAVEGERSFLAALDG 250 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI---GRDAAQYIRFI 299 SC++ IA + + F G++ + DGK E +R G DA ++ G+DA ++ Sbjct: 251 SCRTPIAAHCHLVDGKMQFRGLIASLDGKQVLETTREG-AWDAASLLDAGKDAGAELKGK 309 Query: 300 SNKNVF 305 + + F Sbjct: 310 APADFF 315 >gi|171463846|ref|YP_001797959.1| porphobilinogen deaminase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193384|gb|ACB44345.1| porphobilinogen deaminase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 321 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 101/305 (33%), Positives = 169/305 (55%), Gaps = 5/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LA+ A + L ++ P ++ I+ ++T+GD+I +R L+++GGKGL Sbjct: 14 KRLVIASRESRLAMWQAEHVQDCLKKLY--PDCDVQILGMTTRGDQILDRALSKVGGKGL 71 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L G D AVHS KD+P + +G ++ + RED RD F+S+ SL+DL + Sbjct: 72 FVKELETALEDGRADLAVHSLKDVPMVMPEGFDLACVMAREDARDAFVSNDYASLEDLPI 131 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+++L + + RG ++TR+ KL+ + AI+LA AG+KRL E Sbjct: 132 GAIVGTSSLRRESVLRAKFPHLVIQPLRGNLDTRMGKLDKGEYQAIILAAAGLKRLGLES 191 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L + + P+ GQGA+ IET +P ++ + +N T +V+ ER +L GS Sbjct: 192 RIRAFLPYDPYTPAAGQGALGIETLSKHPNIKQWLAPLNDLPTLFAVSAERMVSRQLGGS 251 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFIS 300 C+ +A A + + V ++DGK + + DA +G AQ + Sbjct: 252 CEVPLAAHAVRDQNQMQIRSFVASTDGKAICLAHGSALVESVEDAEALGLAVAQDLLSQG 311 Query: 301 NKNVF 305 ++ Sbjct: 312 AADLI 316 >gi|194334346|ref|YP_002016206.1| porphobilinogen deaminase [Prosthecochloris aestuarii DSM 271] gi|238058997|sp|B4S922|HEM3_PROA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|194312164|gb|ACF46559.1| porphobilinogen deaminase [Prosthecochloris aestuarii DSM 271] Length = 312 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 114/307 (37%), Positives = 169/307 (55%), Gaps = 6/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ IGTR SPLAL A T++ L P +I + + T GD + + L++IG G Sbjct: 2 KQQLIIGTRSSPLALWQAEFTKAELSK--NFPELDIQLKLIKTTGDVLLDSPLSKIGDMG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT++IEK L++ EID AVHS KD+PT+ +GL +SA+ RED RDV IS +LK L Sbjct: 60 LFTKDIEKHLLAKEIDLAVHSLKDVPTETPEGLILSAFTEREDTRDVIISKNGDNLKQLK 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ I TSSLRR + LL R D + D RG + TR + + + A++LAYAG+ RL Sbjct: 120 PNAKIATSSLRRTSQLLGIRPDFEMGDIRGNLNTRFKRFDESDFDAMILAYAGVHRLNFG 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I EIL + P+ GQGA+ IET +++ + +++VKV+N++++ ERA L L G Sbjct: 180 DRISEILPHDVLLPAVGQGALGIETRIDDEQTRQIVKVMNNQNSEYCTKAERALLRHLQG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI----GRDAAQYIRF 298 C+ I +A K TL+ V + DGK A + G + A+ + Sbjct: 240 GCQIPIGAYATYKNGTLHLSAFVGSVDGKRAIRNEITKENVTAPELAEKTGIELAEELMK 299 Query: 299 ISNKNVF 305 + Sbjct: 300 QGANEIL 306 >gi|292386|gb|AAA60029.1| hydroxymethylbilane synthase [Homo sapiens] Length = 361 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA ++L + P II +ST GD+I + L++IG K L Sbjct: 19 RVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 136 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + RG + TRL K++ + AI+LA AG++R+ Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKMDEQQEFSAIILATAGLQRM 196 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 197 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 256 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 257 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLV 316 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 317 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 353 >gi|54295573|ref|YP_127988.1| porphobilinogen deaminase HemC [Legionella pneumophila str. Lens] gi|61213284|sp|Q5WT65|HEM3_LEGPL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|53755405|emb|CAH16901.1| Porphobilinogen deaminase HemC [Legionella pneumophila str. Lens] Length = 309 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 106/306 (34%), Positives = 158/306 (51%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A R L V + P +I ++P+ T GDR L GG Sbjct: 1 MSAKIIRIATRQSPLALWQANHVREML--VKQWPNLSIELLPMITSGDRFLKDKLLSAGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL Sbjct: 59 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLSLAAICKRDNPFDALISPQFKSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++IGTSSLRR++ LL + ++ V RG I TRL+KL + + AI+LA AG++R+ Sbjct: 119 LPKNAIIGTSSLRRQSQLLAYNPNLQVKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ + P+ QGA+CIE ++ + QEL+ +N + V+ ER A+L Sbjct: 179 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELIYGLNDPISALCVHTERRVNAKL 238 Query: 241 DGSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G+C A + L VL DG + + G +A I + + Sbjct: 239 GGNCHIPFAVYCTITAENLLLLRAKVLNLDGSQMIDDEQQGKIEEAEIIADRCTESLMTK 298 Query: 300 SNKNVF 305 + Sbjct: 299 GAMTLL 304 >gi|224510663|pdb|3EQ1|A Chain A, The Crystal Structure Of Human Porphobilinogen Deaminase At 2.8a Resolution gi|224510664|pdb|3EQ1|B Chain B, The Crystal Structure Of Human Porphobilinogen Deaminase At 2.8a Resolution Length = 361 Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA ++L + P II +ST GD+I + L++IG K L Sbjct: 19 RVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 136 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + +G + TRL KL+ + AI+LA AG++R+ Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIQGNLNTRLRKLDEQQEFSAIILATAGLQRM 196 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 197 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 256 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 257 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLV 316 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 317 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 353 >gi|219117329|ref|XP_002179459.1| hydroxymethylbilane synthase [Phaeodactylum tricornutum CCAP 1055/1] gi|217409350|gb|EEC49282.1| hydroxymethylbilane synthase [Phaeodactylum tricornutum CCAP 1055/1] Length = 329 Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 121/307 (39%), Positives = 179/307 (58%), Gaps = 4/307 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGK 61 +P RIGTR SPLALA A+ETR L++ I I L T+GD I +++L E+GGK Sbjct: 7 QPLRIGTRGSPLALAQAYETRKRLIENFPDLEAEGAIEICVLKTQGDMILDKSLMELGGK 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSLK 119 GLFT+E++ L+S E+D VHS KD+PT L G + LPRED D FI + ++ Sbjct: 67 GLFTKELDTALLSDEVDICVHSMKDVPTWLPDGTVLPCNLPREDTNDAFIYKDDSVKRIE 126 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 D+ SVIGT+SLRR+A L+ + ++FRG ++TRL KL++ A LLA AG+KR+ Sbjct: 127 DIPDGSVIGTASLRRQAQLMAKNPTLKCVNFRGNVQTRLRKLDDGVVDATLLAIAGLKRM 186 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + IL ++ P+ QGAI I+ ++ ++ + + +NH +T V+CER FL Sbjct: 187 DMDGCATSILEWDEMLPAVAQGAIGIQCRDDDERSLKYLAALNHPETKACVDCERGFLEA 246 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 LDG+CK+ IAG A + F G++ DG E G +A IGR+A + ++ Sbjct: 247 LDGNCKTPIAGQARIVDGKIMFRGLIAMPDGSKKFECESEGAIEEAAKIGREAGEGLKKE 306 Query: 300 SNKNVFN 306 + + F Sbjct: 307 AGEEFFQ 313 >gi|293374464|ref|ZP_06620786.1| hydroxymethylbilane synthase [Turicibacter sanguinis PC909] gi|292646843|gb|EFF64831.1| hydroxymethylbilane synthase [Turicibacter sanguinis PC909] Length = 301 Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 105/294 (35%), Positives = 157/294 (53%), Gaps = 3/294 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LAL L H P + + TKGD I + +L +IG KGLF Sbjct: 3 VVVGTRGSKLALTQTQWVIDQLRKYH--PEVEFEVKIIKTKGDLIQHVSLDKIGDKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124 EIE++L+ EID AVHS KDMP+KL KGL+ +A RED RDV I ++L+DL Sbjct: 61 REIEQQLLDKEIDIAVHSMKDMPSKLPKGLKFAAVPKREDPRDVLILKDGYKTLEDLPKG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGT S RRK LL++R D+ ++ RG I+TR+ K+ + I+LA AGI R ++ Sbjct: 121 AKIGTGSKRRKYQLLKYRPDLDILSIRGNIDTRIRKIEDENLDGIVLAAAGILRAGMSEM 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + ++ P+P QGA+ I+ + + + L++ I +T V ERAFLA ++G C Sbjct: 181 ISSYIPVDIMVPAPAQGALAIQIREADLEIEALIESIKDVETEIRVAAERAFLAGVNGGC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 + + +G L G+ + +G G I +G + AQ++ Sbjct: 241 HIPMGAYCELEGDKLKLTGLYGSENGNCLVRKCLEGGIESPIELGLEVAQFVLK 294 >gi|109108914|ref|XP_001101764.1| PREDICTED: porphobilinogen deaminase isoform 6 [Macaca mulatta] Length = 391 Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 108/337 (32%), Positives = 159/337 (47%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K L Sbjct: 49 RVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 106 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 107 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 166 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R S + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 167 LPEKSVVGTSSLRRAAQLQRKFSHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 226 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 227 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 286 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 287 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQDTMQATIHVPAQHEDGPEDDPQLV 346 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 347 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 383 >gi|21283343|ref|NP_646431.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MW2] gi|49486497|ref|YP_043718.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MSSA476] gi|297207616|ref|ZP_06924051.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911698|ref|ZP_07129142.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus TCH70] gi|23821677|sp|Q8NW74|HEM3_STAAW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|55976400|sp|Q6G8Q5|HEM3_STAAS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|21204783|dbj|BAB95479.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MW2] gi|49244940|emb|CAG43401.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MSSA476] gi|296887633|gb|EFH26531.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300887119|gb|EFK82320.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus TCH70] gi|323440785|gb|EGA98494.1| porphobilinogen deaminase [Staphylococcus aureus O11] gi|323442940|gb|EGB00563.1| porphobilinogen deaminase [Staphylococcus aureus O46] Length = 308 Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 167/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGL Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L Sbjct: 60 FVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DG Sbjct: 180 DIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++ Sbjct: 240 SCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKTVSNKLKEQGA 297 Query: 302 KNVF 305 + Sbjct: 298 YEII 301 >gi|52842939|ref|YP_096738.1| porphobilinogen deaminase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52630050|gb|AAU28791.1| porphobilinogen deaminase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 321 Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 106/306 (34%), Positives = 159/306 (51%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A R L V + P +I ++P+ T GDR L GG Sbjct: 13 MSAKIIRIATRQSPLALWQANHVREML--VKQWPNLSIELLPMITSGDRFLKDKLLSAGG 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL Sbjct: 71 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLLLTAICKRDNPFDALISPQFKSLAA 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++IGTSSLRR++ LL + ++ + RG I TRL+KL + + AI+LA AG++R+ Sbjct: 131 LPKNAIIGTSSLRRQSQLLAYNPNLQIKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ + P+ QGA+CIE ++ + QELV +N + V+ ER A+L Sbjct: 191 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELVHGLNDPISALCVHTERRVNAKL 250 Query: 241 DGSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G+C A + L VL DG + + G +A I + + Sbjct: 251 GGNCHIPFAVYCTITEEKLLLLRAKVLNMDGSQMIDDEQQGKIAEAEVIADRCTESLMTK 310 Query: 300 SNKNVF 305 ++ Sbjct: 311 GAMSLL 316 >gi|15924660|ref|NP_372194.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Mu50] gi|15927249|ref|NP_374782.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus N315] gi|148268151|ref|YP_001247094.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus JH9] gi|150394218|ref|YP_001316893.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus JH1] gi|156979988|ref|YP_001442247.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Mu3] gi|253317186|ref|ZP_04840399.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006455|ref|ZP_05145056.2| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257794056|ref|ZP_05643035.1| porphobilinogen deaminase [Staphylococcus aureus A9781] gi|258415760|ref|ZP_05682031.1| porphobilinogen deaminase [Staphylococcus aureus A9763] gi|258422003|ref|ZP_05684923.1| porphobilinogen deaminase [Staphylococcus aureus A9719] gi|258438239|ref|ZP_05689523.1| porphobilinogen deaminase [Staphylococcus aureus A9299] gi|258443697|ref|ZP_05692036.1| porphobilinogen deaminase [Staphylococcus aureus A8115] gi|258444935|ref|ZP_05693255.1| porphobilinogen deaminase [Staphylococcus aureus A6300] gi|258447989|ref|ZP_05696121.1| porphobilinogen deaminase [Staphylococcus aureus A6224] gi|258454303|ref|ZP_05702272.1| porphobilinogen deaminase [Staphylococcus aureus A5937] gi|269203288|ref|YP_003282557.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus ED98] gi|282893166|ref|ZP_06301400.1| porphobilinogen deaminase [Staphylococcus aureus A8117] gi|282929344|ref|ZP_06336911.1| porphobilinogen deaminase [Staphylococcus aureus A10102] gi|295405981|ref|ZP_06815789.1| porphobilinogen deaminase [Staphylococcus aureus A8819] gi|296274902|ref|ZP_06857409.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MR1] gi|297245093|ref|ZP_06928970.1| porphobilinogen deaminase [Staphylococcus aureus A8796] gi|54037282|sp|P64341|HEM3_STAAN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|54041349|sp|P64340|HEM3_STAAM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166217788|sp|A7X391|HEM3_STAA1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189028098|sp|A6U2D8|HEM3_STAA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189028160|sp|A5ITJ5|HEM3_STAA9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|13701467|dbj|BAB42761.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus N315] gi|14247442|dbj|BAB57832.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Mu50] gi|147741220|gb|ABQ49518.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus JH9] gi|149946670|gb|ABR52606.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus JH1] gi|156722123|dbj|BAF78540.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Mu3] gi|257788028|gb|EEV26368.1| porphobilinogen deaminase [Staphylococcus aureus A9781] gi|257839353|gb|EEV63826.1| porphobilinogen deaminase [Staphylococcus aureus A9763] gi|257842047|gb|EEV66476.1| porphobilinogen deaminase [Staphylococcus aureus A9719] gi|257848283|gb|EEV72274.1| porphobilinogen deaminase [Staphylococcus aureus A9299] gi|257851103|gb|EEV75046.1| porphobilinogen deaminase [Staphylococcus aureus A8115] gi|257856143|gb|EEV79058.1| porphobilinogen deaminase [Staphylococcus aureus A6300] gi|257858750|gb|EEV81621.1| porphobilinogen deaminase [Staphylococcus aureus A6224] gi|257863533|gb|EEV86292.1| porphobilinogen deaminase [Staphylococcus aureus A5937] gi|262075578|gb|ACY11551.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus ED98] gi|282589076|gb|EFB94177.1| porphobilinogen deaminase [Staphylococcus aureus A10102] gi|282764484|gb|EFC04610.1| porphobilinogen deaminase [Staphylococcus aureus A8117] gi|285817354|gb|ADC37841.1| Porphobilinogen deaminase [Staphylococcus aureus 04-02981] gi|294968978|gb|EFG44999.1| porphobilinogen deaminase [Staphylococcus aureus A8819] gi|297178173|gb|EFH37421.1| porphobilinogen deaminase [Staphylococcus aureus A8796] gi|312830049|emb|CBX34891.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315130698|gb|EFT86684.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus CGS03] gi|329727593|gb|EGG64049.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus 21172] Length = 308 Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 168/304 (55%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + + L V P I I + TKGDRI ++ L+++GGKGL Sbjct: 2 RKLVVGSRRSKLALTQSQQFINKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L Sbjct: 60 FVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DG Sbjct: 180 DIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++ Sbjct: 240 SCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKTVSNKLKEQGA 297 Query: 302 KNVF 305 + Sbjct: 298 YEII 301 >gi|302333336|gb|ADL23529.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus JKD6159] Length = 308 Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 104/304 (34%), Positives = 167/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGL Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L Sbjct: 60 FVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DG Sbjct: 180 DIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ IAG+A + F G+++ DGK E + NG + + +G+ + ++ Sbjct: 240 SCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTLNGT--NPVELGKKVSNKLKKQGA 297 Query: 302 KNVF 305 + Sbjct: 298 YEII 301 >gi|283470938|emb|CAQ50149.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus ST398] Length = 308 Score = 349 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 167/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKGL Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L Sbjct: 60 FVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+DG Sbjct: 180 DIVTSYLDRDTLLPAIGQGALGIECRSDDDELLSLLSKVHNDEVAKCVTAERTFLAEMDG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++ Sbjct: 240 SCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKTVSNKLKEQGA 297 Query: 302 KNVF 305 + Sbjct: 298 YEII 301 >gi|329724698|gb|EGG61204.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU144] Length = 308 Score = 349 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 101/304 (33%), Positives = 172/304 (56%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L P +I I + TKGD+I ++ L+++GGKGL Sbjct: 2 RKLIVGSRRSKLALTQSQQFIDKLK--FIDPSLDIEIKEIVTKGDKIVDKQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L + EID A+HS KD+P+ + GL + RE D +I+ L++L+ Sbjct: 60 FVKEIQNELFNKEIDMAIHSLKDVPSMIPDGLTLGCIPDREIPFDAYIAKNHIPLQELSE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ Sbjct: 120 GSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRIGWSD 179 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ L+ + P+ GQGA+ IE ++ + +L+ +++ D V ER FL+E+DG Sbjct: 180 NIVTTYLDRDILLPAIGQGALGIECRSDDKELLDLLSKVHNHDVAQCVTAERTFLSEMDG 239 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ I G+A + + + F G++++ DGK +E + G D + +G + +Q ++ Sbjct: 240 SCQVPIGGYATIAQDNQIEFTGLIMSPDGKERYEHTALGT--DPVKLGIEVSQVLKKQGA 297 Query: 302 KNVF 305 ++ Sbjct: 298 YDII 301 >gi|260888475|ref|ZP_05899738.1| hydroxymethylbilane synthase [Selenomonas sputigena ATCC 35185] gi|330838215|ref|YP_004412795.1| Porphobilinogen deaminase [Selenomonas sputigena ATCC 35185] gi|260861672|gb|EEX76172.1| hydroxymethylbilane synthase [Selenomonas sputigena ATCC 35185] gi|329745979|gb|AEB99335.1| Porphobilinogen deaminase [Selenomonas sputigena ATCC 35185] Length = 311 Score = 349 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 116/306 (37%), Positives = 173/306 (56%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+K IGTR S LAL A + L + + P ++V ++TKGDR+ + L +IGG Sbjct: 1 MKKDTIVIGTRSSKLALWQADYVEAKLRE--RYPELHVVQKRMTTKGDRVLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ +++GEID AVHS KDMPT+L +GL ++A R D D +S Q+L + Sbjct: 59 KGLFTKELEQAMLAGEIDLAVHSLKDMPTELPEGLMLAAVTERFDPGDAVVSPRYQTLAN 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+A LL R D+ ++ RG + TRL KL AI+LA AG+KRL Sbjct: 119 LPQGAKVGTSSLRRRAQLLAKRPDLEIVSLRGNVNTRLKKLEEENFDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I EIL E P+ GQGA+ IE ++ L+ ++ T + ERAFLA + Sbjct: 179 FHDRITEILPREICLPAVGQGALAIEARADDEATLSLIAFLDDAATRAAARAERAFLARV 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ + +A L ++ + DG+ + + G+ DA IGR A+ + + Sbjct: 239 EGGCQVPVGVYAEAADEALEMEAVIASIDGERLYRKKKAGSALDAEKIGRALAEELLAMG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 GKEILQ 304 >gi|35309|emb|CAA28499.1| unnamed protein product [Homo sapiens] Length = 361 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 156/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA ++L + P II +ST GD+I + L++IG K L Sbjct: 19 RVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 136 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 196 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + +IL+ E + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 197 GWHNRVGQILHPEKCMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 256 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 257 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLV 316 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 317 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 353 >gi|260893122|ref|YP_003239219.1| porphobilinogen deaminase [Ammonifex degensii KC4] gi|260865263|gb|ACX52369.1| porphobilinogen deaminase [Ammonifex degensii KC4] Length = 308 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 167/305 (54%), Gaps = 3/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ RIGTR S LALA + L + + P + I+ + T GD++ N L IGGK Sbjct: 4 SKRCLRIGTRGSDLALAQTEQVLQILRE--RWPHYTYEIVKIKTTGDKVRNLALPRIGGK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT+E+E L+ +ID AVHS KD+PT+L + L + A LPRE DV IS T L+DL Sbjct: 62 GLFTKELEVALLEEKIDLAVHSLKDLPTELPEELCVGAVLPREHPGDVLISLTGAGLEDL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSSLRR+A L R D++ + RG + TRL KL + A++LA+AG++RL+ Sbjct: 122 PEGARIGTSSLRRQAQLKAARPDLNFVPLRGNVPTRLRKLEKGECEAVVLAWAGLRRLRL 181 Query: 182 EKVIK-EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + +L + P+ QGAI +E + + +++V+V++ T V ERAFL L Sbjct: 182 DLTGRMTLLPYQVCLPAVAQGAIGVEMRKEDRELRKMVEVLDDPTTRLEVTAERAFLRWL 241 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C IA A G+ + G+V +GK +G+ +G A+ + Sbjct: 242 GGGCHVPIAALARVAGAEILLEGLVADPEGKRIVRGQESGSTAYPEEVGIRLAERLLREG 301 Query: 301 NKNVF 305 + + Sbjct: 302 AEELL 306 >gi|11386777|sp|O69110|HEM3_PAEMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|3172405|gb|AAC18587.1| porphobilinogen deaminase [Paenibacillus macerans] Length = 324 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 111/324 (34%), Positives = 169/324 (52%), Gaps = 24/324 (7%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEI 58 M K+ +GTR S LAL + L ++ + I + TKGDRI + TL++I Sbjct: 1 MTKRTIVVGTRQSQLALTQTEQVIGDLKELCRAHGLPFEFEIKKIVTKGDRILDVTLSKI 60 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLF +EIE+ ++ GEID AVHS KDMP+ L +GL R+D RD IS + L Sbjct: 61 GGKGLFVKEIEQAMLDGEIDMAVHSMKDMPSVLPEGLINGGVPLRKDPRDALISRSGLHL 120 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L + +GTS+LRR + LL +R D+ + RG I++RL KL AI+LA AG++R Sbjct: 121 HELPQGARVGTSTLRRSSQLLAYRPDLVLEPVRGNIDSRLRKLEEEGFDAIILAAAGLQR 180 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E + L+ + P+ GQGA+ IE N+ + ++++ + N DT +V ER FLA Sbjct: 181 MGWENRVTAYLSADVCLPAVGQGALGIECRENDAELRDVLSLYNDPDTALTVAAERRFLA 240 Query: 239 ELDGSCKSAIAGFAYCK--GST------------------LYFYGIVLASDGKIFHEVSR 278 L+G C+ IA +A + G + G+V ++DG+ + E Sbjct: 241 VLNGGCQVPIAAYANLERAGGQAPEEGGRAAASQAPAALRIRLTGMVGSADGRGYFEGEC 300 Query: 279 NGNRCDAINIGRDAAQYIRFISNK 302 R D + G A + + Sbjct: 301 R--REDPVAFGERIAGLLLAQGGR 322 >gi|149041454|gb|EDL95295.1| hydroxymethylbilane synthase, isoform CRA_a [Rattus norvegicus] Length = 345 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + L ++ P II +ST GD+I + L++IG K L Sbjct: 3 RVIRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKSL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 61 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLET 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 121 LPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAVAGLQRM 180 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 181 GWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 240 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 241 LEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLV 300 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 301 GITARNIPRGAQLAAENLGISLASLLLNKGAKNILDV 337 >gi|254522867|ref|ZP_05134922.1| porphobilinogen deaminase [Stenotrophomonas sp. SKA14] gi|219720458|gb|EED38983.1| porphobilinogen deaminase [Stenotrophomonas sp. SKA14] Length = 303 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 158/303 (52%), Gaps = 2/303 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL + L H P ++ ++P+ST+GD + +R+L IGGKGLF Sbjct: 3 TVRIATRKSPLALWQSEHVADRLRQAH--PGLHVELVPMSTRGDEVLDRSLAAIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ GE DCAVHS KD+P +L + A L R D D F+S+ SL+ L + Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDAPFALPAMLTRHDPADGFVSNLYASLEALPIG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A L R D+ ++D RG + TRL KL+N AI+LA AG++RL + Sbjct: 121 ARVGTSSLRRQAQLRALRPDLELLDLRGNVNTRLAKLDNGGYDAIVLAVAGLERLGLGQR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L + P+P QGA+ +E N + L ++ T V ERA L GSC Sbjct: 181 IVARLQPPQWLPAPAQGAVAVECDGGNARLMALFAGLDDASTRACVEAERAMNRALHGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 +A A +G L+ G+V ++ G D +G+ A + + Sbjct: 241 HVPVAAIAQWQGDDLHLQGLVGSASDGRAVRAEAVGPASDPDALGQRVATMLLDAGAGEL 300 Query: 305 FNF 307 N Sbjct: 301 LNV 303 >gi|91774391|ref|YP_544147.1| porphobilinogen deaminase [Methylobacillus flagellatus KT] gi|123253776|sp|Q1GXA1|HEM3_METFK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|91708378|gb|ABE48306.1| hydroxymethylbilane synthase [Methylobacillus flagellatus KT] Length = 310 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 105/302 (34%), Positives = 158/302 (52%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LA+ A + L ++ P + I+ ++T GD+I + L IGGKGL Sbjct: 5 KTLVIASRESALAMWQAQYIQGRLQTLY--PETEVTILGMTTTGDQILDSPLARIGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ L G D AVHS KD+P L G ++A R+D RD F+S+ +L L Sbjct: 63 FVKELEQALADGRADLAVHSMKDVPMHLPPGFALAAISERDDPRDAFVSNDYPNLASLPA 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S++GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL Sbjct: 123 GSIVGTSSLRRQSQLQARFPGLKVESLRGNLQTRLRKLDEGQYAAIILAAAGLKRLGLAS 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+E ++ ++ P+ GQGA+ IE + +++ +NH +T V ER L GS Sbjct: 183 RIRESIDPDNSIPAVGQGALGIEINAERLDLLKVLAPLNHPETAACVEAERGMSRALAGS 242 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ + FA G TL G V + DGK F S G +G+ A + + Sbjct: 243 CQVPLGAFAQQHGDTLQMTGFVASIDGKEFLRESVQGPAEQPEALGQALAAKLVALGADR 302 Query: 304 VF 305 + Sbjct: 303 IL 304 >gi|292385|gb|AAA60030.1| hydroxymethylbilane synthase [Homo sapiens] Length = 344 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA ++L + P II +ST GD+I + L++IG K L Sbjct: 2 RVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 60 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + RG + TRL K++ + AI+LA AG++R+ Sbjct: 120 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKMDEQQEFSAIILATAGLQRM 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 180 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 240 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLV 299 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 300 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 336 >gi|78214363|ref|NP_037300.2| porphobilinogen deaminase [Rattus norvegicus] gi|56789892|gb|AAH88162.1| Hydroxymethylbilane synthase [Rattus norvegicus] Length = 361 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + L ++ P II +ST GD+I + L++IG K L Sbjct: 19 RVIRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 77 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLET 136 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 137 LPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAVAGLQRM 196 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 197 GWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 256 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 257 LEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLV 316 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 317 GITARNIPRGAQLAAENLGISLASLLLNKGAKNILDV 353 >gi|2506505|sp|P19356|HEM3_RAT RecName: Full=Porphobilinogen deaminase; Short=PBG-D; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|1911164|emb|CAA72734.1| hemC [Rattus sp.] Length = 361 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + L ++ P II +ST GD+I + L++IG K L Sbjct: 19 RVIRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 77 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLET 136 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179 L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 137 LPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDEQLEFSAIILAVAGLQRM 196 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 197 GWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 256 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 257 LEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLV 316 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 317 GITARNIPRGAQLAAENLGISLASLLLNKGAKNILDV 353 >gi|218885688|ref|YP_002435009.1| porphobilinogen deaminase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226740632|sp|B8DKW2|HEM3_DESVM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|218756642|gb|ACL07541.1| porphobilinogen deaminase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 317 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 114/307 (37%), Positives = 159/307 (51%), Gaps = 7/307 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL A +S + H P ++ ++ L T+GD I + L ++GGKGL Sbjct: 2 KKLVIATRGSKLALWQAEHVKSCIEGQH--PGVSVELLVLKTRGDIILDVPLAKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+ G D AVHS KD+P +L +GL + RE+ D F+S SL L Sbjct: 60 FVKEIEEALLDGRADLAVHSMKDVPMELPEGLVLGIIPEREEPSDTFLSVHHDSLAALPH 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRR++ LL R D++V+ RG ++TRL KL+ + AI++A AG+KRL Sbjct: 120 GATVGTSSLRRQSQLLALRPDLNVVSLRGNVDTRLRKLSEGQFDAIIMATAGMKRLGLSA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 E+L F P+ GQGA+ IE + EL+ + H T V ER FLA L G Sbjct: 180 PRSEVLGPPAFLPAVGQGALGIEFRADRADLHELLAFMEHTPTRIRVEAERGFLAGLQGG 239 Query: 244 CKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIRF 298 C+ IAG A G T G+V G + NG + A IG D A + Sbjct: 240 CQVPIAGHAVMTGDGTFALEGLVADLTGARVIRRTMNGVSAPDGAQARQIGLDLAAQLVA 299 Query: 299 ISNKNVF 305 + Sbjct: 300 DGAGEIL 306 >gi|109108912|ref|XP_001101850.1| PREDICTED: porphobilinogen deaminase isoform 7 [Macaca mulatta] Length = 361 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 108/337 (32%), Positives = 159/337 (47%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K L Sbjct: 19 RVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 136 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R S + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFSHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 196 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 197 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 256 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 257 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQDTMQATIHVPAQHEDGPEDDPQLV 316 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 317 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 353 >gi|54298727|ref|YP_125096.1| porphobilinogen deaminase [Legionella pneumophila str. Paris] gi|61213295|sp|Q5X1F2|HEM3_LEGPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|53752512|emb|CAH13944.1| Porphobilinogen deaminase HemC [Legionella pneumophila str. Paris] Length = 309 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 105/306 (34%), Positives = 159/306 (51%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A R L V + P +I ++P+ T GDR L GG Sbjct: 1 MSAKIIRIATRQSPLALWQANHVREML--VKQWPNLSIELLPMITSGDRFLKDKLLSAGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL Sbjct: 59 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLSLAAICKRDNPFDALISPRFKSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++IGTSSLRR++ LL + ++ + RG I TRL+KL + + AI+LA AG++R+ Sbjct: 119 LPKNAIIGTSSLRRQSQLLAYNPNLQIKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ + P+ QGA+CIE ++ + QEL+ +N + V+ ER A+L Sbjct: 179 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELIHGLNDPISALCVHTERRVNAKL 238 Query: 241 DGSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G+C A + L VL DG + + G +A I + + Sbjct: 239 GGNCHIPFAVYCTITAEKLLLLRAKVLNLDGSQMIDDEQQGKIEEAEIIADRCTESLMTK 298 Query: 300 SNKNVF 305 ++ Sbjct: 299 GAMSLL 304 >gi|312964492|gb|ADR30032.1| porphobilinogen deaminase [Ovis aries] Length = 350 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 105/337 (31%), Positives = 159/337 (47%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K L Sbjct: 8 RVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE D + H ++L+ Sbjct: 66 FTKELEHALERNEVDLVVHSLKDLPTVLPPGFTIGAVCKRESPYDAVVFHPKFVGKTLET 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 126 LPEKSVVGTSSLRRAAQLQRKFPHLEFRNIRGNLNTRLRKLDELQEFSAIILAAAGLQRM 185 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ER+FL Sbjct: 186 GWQNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERSFLRH 245 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + +G + + +G D Sbjct: 246 LEGGCSVPVAVHTAIKDGQLYLTGGVWSLNGAETMQDTMQTTIHVPVQHEDGPEDDPQLV 305 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 306 GITARNIPRQPQLAAENLGISLATLLLNKGAKNILDV 342 >gi|253997747|ref|YP_003049810.1| porphobilinogen deaminase [Methylovorus sp. SIP3-4] gi|253984426|gb|ACT49283.1| porphobilinogen deaminase [Methylovorus sp. SIP3-4] Length = 320 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 103/302 (34%), Positives = 155/302 (51%), Gaps = 2/302 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A ++ L ++ P + I+ ++T GD+I + L IGGKGLF Sbjct: 12 KLVIASRESALAMWQARHIQARLQALY--PSTQVEILGMTTTGDQILDSPLARIGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E+ L G D AVHS KD+P L +G ++A RED RD F+S+ SL+ L Sbjct: 70 VKELEQALADGRADLAVHSMKDVPMHLPEGFAMAAIGEREDPRDAFVSNDYPSLEALPAG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S++GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+ RL Sbjct: 130 SIVGTSSLRRQSQLQARFPHLVIESLRGNLQTRLRKLDEGQYAAIILAAAGLIRLGLGNR 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + + ED P+ GQGA+ IE + ++ +NH DT V ER L GSC Sbjct: 190 IAQTIAPEDSIPAVGQGALGIEINAARTDLLTVLAPLNHADTAACVEAERGMSRALAGSC 249 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A +G + +G V + DGK GN +G+ AQ + + Sbjct: 250 TVPLGAYATKQGENITIHGFVASVDGKQMLRAEATGNAAQPELLGQQLAQSLIARGADKI 309 Query: 305 FN 306 Sbjct: 310 LQ 311 >gi|325841152|ref|ZP_08167277.1| hydroxymethylbilane synthase [Turicibacter sp. HGF1] gi|325490009|gb|EGC92355.1| hydroxymethylbilane synthase [Turicibacter sp. HGF1] Length = 301 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 105/294 (35%), Positives = 157/294 (53%), Gaps = 3/294 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LAL L H P + + TKGD I + +L +IG KGLF Sbjct: 3 VVVGTRGSKLALTQTQWVIDQLRKYH--PEVEFEVKIIKTKGDLIQHVSLDKIGDKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124 EIE++L+ EID AVHS KDMP+KL KGL+ +A RED RDV I ++L+DL Sbjct: 61 REIEQQLLDKEIDIAVHSMKDMPSKLPKGLKFAAVPKREDPRDVLILKDGYKTLEDLPKG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGT S RRK LL++R D+ ++ RG I+TR+ K+ + I+LA AGI R ++ Sbjct: 121 AKIGTGSKRRKYQLLKYRPDLDILSIRGNIDTRIRKIEDENLDGIVLAAAGILRAGMSEM 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + ++ P+P QGA+ I+ + + + L++ I +T V ERAFLA ++G C Sbjct: 181 ISSYIPVDIMVPAPAQGALAIQIREADLEIEALIESIKDVETEIRVAAERAFLAGVNGGC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 + + +G L G+ + +G G I +G + AQ++ Sbjct: 241 HIPMGAYCELEGEKLKLTGLYGSENGNCLVRKCLEGGIESPIELGLEVAQFVLK 294 >gi|258591837|emb|CBE68140.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [NC10 bacterium 'Dutch sediment'] Length = 315 Score = 348 bits (894), Expect = 5e-94, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 160/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++GTR SPLAL A L + P ++ I+P+ T GD+ + L+++GG Sbjct: 1 MRSHTVKLGTRGSPLALCQAGLVTEELRR--RWPDLDVTIVPIKTSGDKFLDVVLSQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L+ G ID AVHS KD+P +L GL A + RED D ++ D Sbjct: 59 KGLFVKEIEEALLDGRIDLAVHSLKDLPAELAPGLCEGAVMRREDPLDALVARNGLRFTD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSSLRR+ L R D+ + RG ++TRLNKL A++LA AG+ RL Sbjct: 119 LPRGARIGTSSLRRQVQFLHCRPDLQIESLRGNVQTRLNKLETLGLEAVVLAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I E L + P+ GQGA+ IE ++ + E V+ +NH +T + ERAFL L Sbjct: 179 LQDRITERLQPDLCLPAIGQGALVIEIREDDRQTAERVETLNHRETRQATTAERAFLRRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC + IA F +G TL G+V DGK + G +G+ A + Sbjct: 239 GGSCVTPIAAFGRLEGETLELTGMVAGLDGKRLLRQAVVGEAGAPEQVGQTLADRLLSAG 298 Query: 301 NKNVF 305 + Sbjct: 299 AGEII 303 >gi|325266571|ref|ZP_08133248.1| hydroxymethylbilane synthase [Kingella denitrificans ATCC 33394] gi|324982014|gb|EGC17649.1| hydroxymethylbilane synthase [Kingella denitrificans ATCC 33394] Length = 313 Score = 348 bits (894), Expect = 5e-94, Method: Composition-based stats. Identities = 99/303 (32%), Positives = 158/303 (52%), Gaps = 3/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + I +R S LA+ A ++ L ++ P + I+ ++T+GD+I ++TL++IGGKGL Sbjct: 5 QKLTIASRESALAMWQAEHIQAKLQALY--PSCTVDILGMTTQGDQILDKTLSKIGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L D AVHS KD+P L +G + A R + D +S+ + L++L Sbjct: 63 FIKELETALQENRADLAVHSLKDVPMDLPEGFVLVAVGERANPFDALVSNRFERLEELPE 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR+A L + V RG ++TRL KL+N AI+LA AG++RL+ Sbjct: 123 GAVVGTSSLRREAQLRARFPHLQVKPLRGNVQTRLAKLDNGDYDAIILAAAGLERLQLHG 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ +L D P+ GQGA+ IE + +++ +NH T V ERA L GS Sbjct: 183 RIRNLLPPSDSLPAAGQGALGIEIAAHRTDLVDILLPLNHAQTAACVTAERALARALGGS 242 Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ + + L +G+V DG + + A +GR A+ + + Sbjct: 243 CQVPLGAYCTADEYGLLTLHGLVAHPDGSVVMTANAQAPAPYADALGRAVAKKLSDDGAR 302 Query: 303 NVF 305 V Sbjct: 303 EVI 305 >gi|315635705|ref|ZP_07890968.1| hydroxymethylbilane synthase [Arcobacter butzleri JV22] gi|315480002|gb|EFU70672.1| hydroxymethylbilane synthase [Arcobacter butzleri JV22] Length = 312 Score = 348 bits (894), Expect = 5e-94, Method: Composition-based stats. Identities = 111/309 (35%), Positives = 162/309 (52%), Gaps = 8/309 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK I TR S LAL + ++ L++ + P I + TKGD+I + L +IGG Sbjct: 1 MEK--LVIATRRSQLALWQSEYVKARLLEHY--PNMQIELQEFVTKGDKILDVPLAKIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E ++ G AVHS KD+PT+ GL ++A R D RD F+S+ SL++ Sbjct: 57 KGLFTKELEVAMLEGSAHLAVHSLKDVPTQFEDGLMLAAVTKRFDPRDAFLSNKYTSLEE 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT+SLRR+ L R DI + D RG I TR+ KLN + AI+LA GI++L Sbjct: 117 LPKGAVVGTTSLRRRMALKILRPDIELKDLRGNINTRIAKLNAGEYDAIILAATGIQKLG 176 Query: 181 KEKVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 E +K + PS GQ + IET N+PK E++KV+N + ER+F+ Sbjct: 177 IENEVKYFSPISTDVMIPSMGQATLGIET-TNDPKVLEILKVLNDNNAHIESTIERSFVD 235 Query: 239 ELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L G C+ I A +++ IV DG + + D IG++ AQ Sbjct: 236 TLQGGCQVPIGVKATILDENSIRVQAIVGMPDGSEYISEDITADIEDYETIGQNLAQIFI 295 Query: 298 FISNKNVFN 306 K + Sbjct: 296 DQGAKELLE 304 >gi|169831506|ref|YP_001717488.1| porphobilinogen deaminase [Candidatus Desulforudis audaxviator MP104C] gi|238058920|sp|B1I4L8|HEM3_DESAP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|169638350|gb|ACA59856.1| porphobilinogen deaminase [Candidatus Desulforudis audaxviator MP104C] Length = 309 Score = 348 bits (894), Expect = 5e-94, Method: Composition-based stats. Identities = 106/303 (34%), Positives = 158/303 (52%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++ +GTR S LALA A L + P + V + T GD I L +IG KG Sbjct: 2 RREVVVGTRGSRLALAQADWVIDHLRA--RYPRVSFVRKEIRTTGDNILEVALAKIGDKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E+ L+ EID AVHS KD+PT L +GL I A RE DVFIS + L++L Sbjct: 60 LFTKELEQALLHREIDLAVHSMKDLPTGLPEGLVIGAVSVREYPGDVFISRGGERLEELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR A LL +R D+ VI RG ++TRL KL+ A++LA+AG+ RL Sbjct: 120 AGAVLGTSSLRRTAQLLAYRPDLQVIPVRGNVQTRLRKLDEGVVDALVLAWAGLFRLGLT 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + + + P+ GQGA+ IE ++ + E+++ I+H T +V ER L L+G Sbjct: 180 ERVTHRIPVAMCLPAVGQGALGIEARADDAEILEMLRTIDHAPTRAAVQAERTLLRRLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ + + L +V + DG +G +G A + + Sbjct: 240 GCQVPVGALGRFRDGRLVLEAVVASLDGTELVRAQESGPADRPEALGNSLAVRLLEMGAG 299 Query: 303 NVF 305 + Sbjct: 300 EIL 302 >gi|157736544|ref|YP_001489227.1| porphobilinogen deaminase [Arcobacter butzleri RM4018] gi|167008810|sp|A8ERI4|HEM3_ARCB4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157698398|gb|ABV66558.1| porphobilinogen deaminase [Arcobacter butzleri RM4018] Length = 312 Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 111/309 (35%), Positives = 162/309 (52%), Gaps = 8/309 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK I TR S LAL + +S L++ + P I + TKGD+I + L +IGG Sbjct: 1 MEK--LVIATRRSQLALWQSEYVKSRLLEHY--PNMQIELQEFVTKGDKILDVPLAKIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E ++ G AVHS KD+PT+ GL ++A R D RD F+S+ SL++ Sbjct: 57 KGLFTKELEVAMLEGSAHLAVHSLKDVPTQFEDGLMLAAVTKRFDPRDAFLSNKYTSLEE 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT+SLRR+ L R DI + D RG I TR+ KLN + AI+LA GI++L Sbjct: 117 LPKGAIVGTTSLRRRMALKILRPDIELKDLRGNINTRIAKLNAGEYDAIILAATGIQKLG 176 Query: 181 KEKVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 E +K + PS GQ + IET N+PK E++KV+N + ER+F+ Sbjct: 177 IENEVKYFSPISTDIMIPSMGQATLGIET-TNDPKVLEILKVLNDNNAHIESTVERSFVD 235 Query: 239 ELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L G C+ I A +++ IV DG + + D IG++ AQ Sbjct: 236 TLQGGCQVPIGVKATILDENSIRVQAIVGMPDGSEYISEDITADIEDYETIGQNLAQIFI 295 Query: 298 FISNKNVFN 306 K + Sbjct: 296 DQGAKELLE 304 >gi|308803813|ref|XP_003079219.1| putative porphobilinogen deaminase (ISS) [Ostreococcus tauri] gi|116057674|emb|CAL53877.1| putative porphobilinogen deaminase (ISS) [Ostreococcus tauri] Length = 441 Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 120/306 (39%), Positives = 174/306 (56%), Gaps = 6/306 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKG 62 RIGTR SPLALA A+ TR L + + + I + T GD++ ++ L +IGGKG Sbjct: 46 IVRIGTRGSPLALAQAYMTRDLLKENFPELAEDGALEICIIKTTGDKVLDQPLADIGGKG 105 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT E++ L+ G ID AVHS KD+PT L +G+ + LPRED+RD F+ SL DL Sbjct: 106 LFTRELDDALLDGRIDIAVHSMKDVPTYLPEGMVLPCMLPREDVRDAFLCLKYDSLDDLP 165 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GT+SLRR++ LL + ++FRG +++R+ KL LLA AG+KR+ Sbjct: 166 EGAVVGTASLRRQSQLLYKYPTLKCVNFRGNVQSRIRKLKEEVVDCTLLAIAGLKRMDLA 225 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + K I+ E P+ QGAI I + K + +NHEDT +V ERAFLA LDG Sbjct: 226 QHAKLIIPTEQMLPAVAQGAIGITCRGGDDKQLAFLAKLNHEDTRMAVEGERAFLAALDG 285 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI---GRDAAQYIRFI 299 SC++ IA + + F G++ + DGK E +R G DA ++ G DA ++ Sbjct: 286 SCRTPIAAHCHNVDGKMQFRGLIASLDGKEVLETTREG-AWDAASLLAAGTDAGAELKGK 344 Query: 300 SNKNVF 305 + + F Sbjct: 345 APADFF 350 >gi|332764355|gb|EGJ94590.1| porphobilinogen deaminase [Shigella flexneri 2930-71] Length = 273 Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 97/263 (36%), Positives = 144/263 (54%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 + T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +GL + Sbjct: 1 MVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICE 60 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG + TRL+KL+ Sbjct: 61 REDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLD 120 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + +EL+ +N Sbjct: 121 NGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALN 180 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 H +T V ERA L+G C+ I +A ++ +V A DG R G Sbjct: 181 HHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLCALVGAPDGSQIIRGERRGAP 240 Query: 283 CDAINIGRDAAQYIRFISNKNVF 305 DA +G A+ + + + Sbjct: 241 QDAEQMGISLAEELLNNGAREIL 263 >gi|224083036|ref|XP_002187797.1| PREDICTED: hydroxymethylbilane synthase [Taeniopygia guttata] Length = 371 Score = 348 bits (893), Expect = 6e-94, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 159/337 (47%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + L +++ P + I+ +ST GD+I + L++IG K L Sbjct: 29 RAIRVGTRRSQLARIQTDSVVTMLRELY--PDLHFEIVAMSTTGDKILDTALSKIGEKSL 86 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L I A RE+ D + H ++L Sbjct: 87 FTKELENALERNEVDLVVHSLKDLPTSLPPDFTIGAVCKRENPLDAVVFHPKNCGKTLSL 146 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKRL 179 L SVIGTSSLRR A L + + D RG + TRL KL+ + AI+LA AG+KR+ Sbjct: 147 LPEKSVIGTSSLRRAAQLKKKFPHLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRM 206 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E I ++L+ ED + GQGA+ +E + + +V ++ DT ERAF+ Sbjct: 207 GWENRIGQLLSPEDCLYAVGQGALAVEVRAKDQEILNMVSALHDADTVLCCIAERAFMKR 266 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 267 LEGGCSVPVAVNTLLKDGQLYLTGAVYSLDGSDSLKETMQTGVSYPHQNEDGPNDDVQHV 326 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G + A + K++ + Sbjct: 327 GITAKNVPGQAQEAAENLGVELASLLLSKGAKHILSV 363 >gi|35307|emb|CAA27801.1| unnamed protein product [Homo sapiens] Length = 344 Score = 348 bits (893), Expect = 6e-94, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 156/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA ++L + P II +ST GD+I + L++IG K L Sbjct: 2 RVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 60 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 120 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 180 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 240 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLV 299 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + K + + Sbjct: 300 GITARNIPRGPQLAAQNLGISLANLLLSKGAKTILDV 336 >gi|299822782|ref|ZP_07054668.1| hydroxymethylbilane synthase [Listeria grayi DSM 20601] gi|299816311|gb|EFI83549.1| hydroxymethylbilane synthase [Listeria grayi DSM 20601] Length = 311 Score = 348 bits (893), Expect = 6e-94, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 163/306 (53%), Gaps = 7/306 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +G+R S LAL + L + P + I + TKGD+I + TL+++GGKG Sbjct: 2 KSQIIVGSRRSKLALVQTNWVINELKKHY--PTIDFRIEEMVTKGDKILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E+E+ L+ ID AVHS KD+P + +GL I+A RE DVF+ DL Sbjct: 60 LFVSEVEQALVDKHIDFAVHSMKDVPAVIEEGLTIAAIPERESANDVFVFKEVHDFGDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 ++IGTSSLRR + +L R D+ + RG I+TRL KL AI+LA AG+ R+ Sbjct: 120 TQAIIGTSSLRRASQILAERPDLQIKFIRGNIDTRLRKLREEDFDAIILAQAGLSRMGWL 179 Query: 182 --EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + + + P+ GQGA+ IE + +++++ I+H T + V ERAFL Sbjct: 180 EDDSLRIQTIPETICLPAVGQGALAIECREEDNDTKDILRSIHHAITANCVAAERAFLKT 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ IAG+A GS + F G+V DGK E R G DA IG +AA + Sbjct: 240 LNGGCEIPIAGYATQSGSKVSFKGLVGTPDGKTIWEAERVG--EDADQIGTEAANELLEK 297 Query: 300 SNKNVF 305 + Sbjct: 298 GAGALI 303 >gi|115378196|ref|ZP_01465368.1| porphobilinogen deaminase [Stigmatella aurantiaca DW4/3-1] gi|310820650|ref|YP_003953008.1| porphobilinogen deaminase [Stigmatella aurantiaca DW4/3-1] gi|115364784|gb|EAU63847.1| porphobilinogen deaminase [Stigmatella aurantiaca DW4/3-1] gi|309393722|gb|ADO71181.1| Porphobilinogen deaminase [Stigmatella aurantiaca DW4/3-1] Length = 314 Score = 348 bits (893), Expect = 6e-94, Method: Composition-based stats. Identities = 107/303 (35%), Positives = 162/303 (53%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RI TR SPLAL A + L H P ++ ++ ++T+GDR + L+ +GGKG Sbjct: 2 SRLVRIATRQSPLALWQARHVGALLTAQH--PGLSVSLVEMTTEGDRFLSAPLSSVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L+ G D AVHS KDM + L +GL ++A RED RD F S T +L L Sbjct: 60 LFVKEIEQALLDGRADIAVHSLKDMTSVLPEGLMLAAVPVREDPRDAFCSPTGLTLDRLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR +L WR D+ ++ RG ++TRL K + +LA+AG+KRL E Sbjct: 120 QGARVGTSSLRRSCILRSWRKDLEIVSLRGNVQTRLQKTRDLGLAGTVLAHAGLKRLGLE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I E+L+ P+ GQG + I+ + + + L+ + T +V ERA LA+L+G Sbjct: 180 REISEVLSPSVSLPAVGQGVLAIQCRTEDAEVRALLGPLEDAVTRVAVTAERALLAKLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 CK +AG A + ++ G V DG G +A +G A+ + Sbjct: 240 GCKVPLAGHATVEQGRVHLRGFVGRPDGTQVVAGEVRGTAKEAQALGEALAEDLLSRGAG 299 Query: 303 NVF 305 + Sbjct: 300 EIL 302 >gi|21241393|ref|NP_640975.1| porphobilinogen deaminase [Xanthomonas axonopodis pv. citri str. 306] gi|23821681|sp|Q8PPR3|HEM3_XANAC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|21106726|gb|AAM35511.1| porphobilinogen deaminase [Xanthomonas axonopodis pv. citri str. 306] Length = 304 Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats. Identities = 113/301 (37%), Positives = 167/301 (55%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL + +L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 3 TLRIATRKSPLALWQSEHVADALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ GE DCAVHS KD+P +L + + A L R D D +S+ SL+ L L Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDEPFVLPAILERGDPADALVSNLYASLQALPLG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEAR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC Sbjct: 181 ISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRVCVEAERAMNRALHGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 +A FA +G L+ G+V ++ +G+ D +GR AQ + + Sbjct: 241 HVPVAAFARWEGQDLFLQGMVGSASDGRLIHADAHGSADDTEALGRRVAQGLFDKGAAQL 300 Query: 305 F 305 Sbjct: 301 L 301 >gi|109108922|ref|XP_001101575.1| PREDICTED: porphobilinogen deaminase isoform 4 [Macaca mulatta] gi|109108924|ref|XP_001101668.1| PREDICTED: porphobilinogen deaminase isoform 5 [Macaca mulatta] Length = 344 Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats. Identities = 108/337 (32%), Positives = 159/337 (47%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K L Sbjct: 2 RVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 60 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R S + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 120 LPEKSVVGTSSLRRAAQLQRKFSHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 180 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 240 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQDTMQATIHVPAQHEDGPEDDPQLV 299 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 300 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 336 >gi|291612739|ref|YP_003522896.1| porphobilinogen deaminase [Sideroxydans lithotrophicus ES-1] gi|291582851|gb|ADE10509.1| porphobilinogen deaminase [Sideroxydans lithotrophicus ES-1] Length = 314 Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats. Identities = 105/300 (35%), Positives = 162/300 (54%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A R L ++ P ++ I+ ++T+GD+I + TL++IGGKGLF Sbjct: 12 LVIASRESALAMWQAEHIRDRLRALY--PQTSVSILGMTTQGDQILDVTLSKIGGKGLFV 69 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L +G D AVHS KD+P L +G ++ RED RD F+S+ +L L S Sbjct: 70 KELETALENGSADIAVHSLKDVPMNLPEGFALACIGEREDPRDAFVSNRFDNLAALPAGS 129 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+KRL + I Sbjct: 130 VVGTSSLRRESQLRARFPHLKIEPLRGNVQTRLRKLDEGQYAAIILAAAGLKRLGLGERI 189 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + +++ ++ P+ GQGA+ IET + P + ++ ++H DT V ERA L GSC+ Sbjct: 190 RAVISSDESLPAVGQGALGIETRADRPDLKAVLAPLHHADTAACVLAERAMSRALAGSCQ 249 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + GFA + L G V DG G+ +G AQ + + Sbjct: 250 VPLGGFAEVQNGKLRMRGFVATPDGTRLLRAEHVGDIAQPEALGDLVAQDLLRQGAGEIL 309 >gi|297690413|ref|XP_002822613.1| PREDICTED: porphobilinogen deaminase-like isoform 1 [Pongo abelii] Length = 361 Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K L Sbjct: 19 RVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFAGKTLET 136 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 196 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 197 GWHNGVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 256 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 257 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMHATIHVPAQHEDGPEDDPQLV 316 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 317 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 353 >gi|114051169|ref|NP_001039672.1| porphobilinogen deaminase [Bos taurus] gi|109892198|sp|Q2KIN5|HEM3_BOVIN RecName: Full=Porphobilinogen deaminase; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS gi|86438293|gb|AAI12574.1| Hydroxymethylbilane synthase [Bos taurus] gi|296480113|gb|DAA22228.1| porphobilinogen deaminase [Bos taurus] Length = 361 Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats. Identities = 105/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K L Sbjct: 19 RVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE D + H ++L+ Sbjct: 77 FTKELEHALERNEVDLVVHSLKDLPTVLPPGFTIGAVCKRESPYDAVVFHPKFVGKTLET 136 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILATAGLQRM 196 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ER+FL Sbjct: 197 GWQNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERSFLRH 256 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + +G + + +G D Sbjct: 257 LEGGCSVPVAVHTAIKDGQLYLTGGVWSLNGAETMQDTMQTTIHVPVQHEDGPEDDPQLV 316 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 317 GITARNIPRQPQLAAENLGISLATLLLNKGAKNILDV 353 >gi|152990765|ref|YP_001356487.1| porphobilinogen deaminase [Nitratiruptor sp. SB155-2] gi|166217777|sp|A6Q3S1|HEM3_NITSB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|151422626|dbj|BAF70130.1| porphobilinogen deaminase [Nitratiruptor sp. SB155-2] Length = 310 Score = 347 bits (892), Expect = 8e-94, Method: Composition-based stats. Identities = 103/305 (33%), Positives = 163/305 (53%), Gaps = 10/305 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LAL + ++ L + + + TKGD+I + L IGGKGLF Sbjct: 2 KLTIATRGSKLALWQSNHIKAQLESF----GYEVELKIFKTKGDKILDTPLALIGGKGLF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E ++ GE D AVHS KD+PT+L +GL + A RE D +S ++L DL + Sbjct: 58 TKELEDAMLRGEADLAVHSLKDVPTELPEGLVLGAITKREMTNDSLLSEQYETLADLPPN 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GT+SLRR+ LL R DI + D RG ++TR+NKL N + AI+LAYAG+KRL + Sbjct: 118 AVVGTTSLRRRMQLLHLRPDICIKDLRGNVDTRINKLKNGEFDAIILAYAGLKRLGILES 177 Query: 185 IKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ + I++ P+ GQ A+ IE P ++VK +N E + ER F+ L G Sbjct: 178 VRYVHPIDENTMIPAMGQAALGIECR---PDVVDVVKKLNDEKSAIETFIERDFIDRLQG 234 Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ I A + + + ++ DG + G++ + +G++ A+ + Sbjct: 235 GCQVPIGVRASLLENNDIIVKAVIGLPDGSELLKDKIFGSKENYHELGKELAESMIDNGA 294 Query: 302 KNVFN 306 K + Sbjct: 295 KELLQ 299 >gi|153004241|ref|YP_001378566.1| porphobilinogen deaminase [Anaeromyxobacter sp. Fw109-5] gi|152027814|gb|ABS25582.1| porphobilinogen deaminase [Anaeromyxobacter sp. Fw109-5] Length = 313 Score = 347 bits (892), Expect = 9e-94, Method: Composition-based stats. Identities = 105/300 (35%), Positives = 150/300 (50%), Gaps = 3/300 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLA A L K P + + L TKGDRI L E+GGKGLF Sbjct: 2 IRIATRRSPLAKWQANHVADLLRA--KEPGLEVRLHELVTKGDRILEVPLAEVGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ + + AVHS KD+P +L GL I A RED RD S ++L L + Sbjct: 60 KEIEDALLASDAEIAVHSMKDLPAELAPGLAIGAVPEREDPRDALCSPRYKTLAGLPRGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR A L R D+ + RG +ETRL K + A++LAYAG++RL + Sbjct: 120 KVGTSSLRRGAQLKALRPDLQLEMVRGNVETRLRK-ASEALDAVVLAYAGLRRLGLAEHA 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + E+ P+ QGA+ +E + + + H +T + ER FL ++G C+ Sbjct: 179 TYVFPAEEMLPAVAQGALALEARAADAPTMARLAALEHPETRVRIEAERGFLGRIEGGCQ 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IAG A +G + +V + DG R+G DA +G A+ + + Sbjct: 239 VPIAGHATVQGGRVSMRALVASLDGTRVIRGERSGPAADARQLGIALAEELLSKGAAEIL 298 >gi|126733455|ref|ZP_01749202.1| porphobilinogen deaminase [Roseobacter sp. CCS2] gi|126716321|gb|EBA13185.1| porphobilinogen deaminase [Roseobacter sp. CCS2] Length = 311 Score = 347 bits (892), Expect = 9e-94, Method: Composition-based stats. Identities = 131/301 (43%), Positives = 175/301 (58%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 PF IGTR SPLALA A ETRS LM +P I + GD I +R L EIGGKGLF Sbjct: 11 PFNIGTRGSPLALAQAHETRSRLMAAFNLPEEAFAICVIKVTGDAIQDRPLKEIGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE+ L+ G ID AVHS KDMP GL + YLPRED+RD F+S A SL DLA Sbjct: 71 TREIEEALLDGSIDIAVHSMKDMPVDQPGGLLLDTYLPREDVRDAFVSLNASSLNDLAEG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR++ LL R D+++++FRG ++TRL KL + A A LA AG+ RL V Sbjct: 131 ATVGTSSLRRRSQLLAKRPDLNIVEFRGNVQTRLKKLGDGVAEATFLAMAGLNRLHMTDV 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + ED P+ QGAI IE ++ +A ++ I+ T + ER+FLA LDGSC Sbjct: 191 PRTAVAPEDMLPAVAQGAIGIERRGDDSRAAAMLDAIHDHATGRRLAAERSFLAALDGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ I G A G ++ G +L +DG +G+ D +G A + + + Sbjct: 251 ETPIGGLAELDGGSIRLRGEILRTDGTEVFADDMSGSIEDGPAMGHAMAAKLLEKAGPDF 310 Query: 305 F 305 F Sbjct: 311 F 311 >gi|242309899|ref|ZP_04809054.1| porphobilinogen deaminase [Helicobacter pullorum MIT 98-5489] gi|239523196|gb|EEQ63062.1| porphobilinogen deaminase [Helicobacter pullorum MIT 98-5489] Length = 314 Score = 347 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 101/306 (33%), Positives = 161/306 (52%), Gaps = 6/306 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K IGTR S LAL A + +L + + + + + TKGD+I + L +IGGKGL Sbjct: 2 KKIIIGTRGSVLALWQANFVKRALEEQYS--NLEVELKIVKTKGDKILDVPLAKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E+ ++ GEID AVHS KD+P + ++ L ++A RED+RD F+S +SL++L Sbjct: 60 FTKELEELMLKGEIDIAVHSLKDVPVEFVENLGLAAITKREDVRDSFLSFKYKSLEELPS 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GT+SLRR + R D+ I RG ++TRL +L AI+LA AG+ RL E Sbjct: 120 GAKVGTTSLRRVMQIHTLRKDLDCISLRGNVQTRLKRLKEGDFDAIILAQAGVNRLGIEN 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I I+ ++ P+ GQ A+ IE + + K E++ +N + + ER F+ L+G Sbjct: 180 EIPYIIPLDFMIPAMGQAALGIECRM-DSKVVEMLDFLNDKKACFETSAEREFVRTLEGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFIS 300 C+ I A + + L ++ DG S+ + IGR A + Sbjct: 239 CQVPIGVNANLENNLLSIKAVLGIPDGTKCLRDSKEVQVQGVEECRQIGRKLALEMIDKG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 AREILQ 304 >gi|99082369|ref|YP_614523.1| porphobilinogen deaminase [Ruegeria sp. TM1040] gi|99038649|gb|ABF65261.1| porphobilinogen deaminase [Ruegeria sp. TM1040] Length = 318 Score = 347 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 133/306 (43%), Positives = 181/306 (59%), Gaps = 5/306 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A+ETR L ++ P I+ + T GD +R L EIG Sbjct: 11 PLKIGTRGSPLALAQAYETRDRLARAFELEPTAFDIVVIKTTGDNRAMIDADRPLKEIGN 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+SG ID AVHS KDMPT +GL + YLPRED+RD F+S S+ D Sbjct: 71 KGLFTKEIEEALLSGGIDIAVHSMKDMPTLQPEGLTLDCYLPREDVRDAFVSPGIHSIAD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL N A A LA AG++RL Sbjct: 131 LPEGAVVGTSSLRRRAQLLHRRPDLQVVEFRGNVQTRLQKLENGVASATFLAMAGLRRLD 190 Query: 181 K-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E V ++++D P+ QGAI IE ++ +++ I+H +T + ERAFLA Sbjct: 191 MAEAVPATPISVDDMLPAVAQGAIGIERRSSDITTAAMLEAIHHAETSLRLAAERAFLAA 250 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 LDGSC++ IA A G T+ G +L DG ++G D +GR + +R Sbjct: 251 LDGSCETPIAALADLSGGTIQLRGQILRPDGSEALSDEQDGAIEDGAELGRQMGETLRAR 310 Query: 300 SNKNVF 305 + F Sbjct: 311 AGAGFF 316 >gi|297690415|ref|XP_002822614.1| PREDICTED: porphobilinogen deaminase-like isoform 2 [Pongo abelii] gi|297690417|ref|XP_002822615.1| PREDICTED: porphobilinogen deaminase-like isoform 3 [Pongo abelii] gi|297690419|ref|XP_002822616.1| PREDICTED: porphobilinogen deaminase-like isoform 4 [Pongo abelii] Length = 344 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K L Sbjct: 2 RVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 60 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFAGKTLET 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 120 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 180 GWHNGVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 240 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMHATIHVPAQHEDGPEDDPQLV 299 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 300 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 336 >gi|291412990|ref|XP_002722769.1| PREDICTED: hydroxymethylbilane synthase [Oryctolagus cuniculus] Length = 365 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K L Sbjct: 23 RVIRVGTRKSQLARIQTDSVVATLKTLY--PGLRFEIIAMSTTGDKILDTALSKIGEKSL 80 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G + A RE+ D + H ++L Sbjct: 81 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTVGAICKRENPCDAVVFHPKFVGKTLAT 140 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 141 LPERSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDEQQEFSAIILAVAGLQRM 200 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 201 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLKH 260 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 261 LEGGCSVPVAVHTAMKDGQLYMTGGVWSLDGSDTMQETMQASIQVPAQHEDGPEDDPQLV 320 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 321 GITARNIPRGPQLAAENLGISLANLLLNKGAKNILDV 357 >gi|229543656|ref|ZP_04432716.1| porphobilinogen deaminase [Bacillus coagulans 36D1] gi|229328076|gb|EEN93751.1| porphobilinogen deaminase [Bacillus coagulans 36D1] Length = 310 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 163/304 (53%), Gaps = 5/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + L + P I ++TKGD++ + TL+++GGKGL Sbjct: 2 RTIVVGSRRSKLALTQTKWVVAKLEQLGL--PFRFEIREITTKGDKVLDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE +++ EID AVHS KD+P L GL I RED+RD IS L Sbjct: 60 FVKEIEDAMLNHEIDMAVHSMKDVPAVLPDGLVIGCIPEREDVRDALISKNGTPFSSLKE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 +V+GTSSLRR A LL RSDI + RG I+TRL KL N AI+LA AG+KR+ Sbjct: 120 GAVVGTSSLRRGAQLLAVRSDIRIKSVRGNIDTRLEKLKNGDYDAIVLAAAGLKRMGWSA 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + E + + P+ GQGA+ +E ++ + + ++ ++ +T ++V ER FL +++G Sbjct: 180 DTVTEFFDPDICLPAIGQGALAVECRADDGELLDALRKLDSAETAETVKAERVFLDKMEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG A + +V + DGK ++ + + + + G AA + K Sbjct: 240 GCQVPIAGLAKKTAEGISLTALVASPDGKTVYKETVVSH--NPVTAGEKAADILSRQGAK 297 Query: 303 NVFN 306 + Sbjct: 298 ALIE 301 >gi|61213316|sp|Q5ZRY6|HEM3_LEGPH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 309 Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats. Identities = 106/306 (34%), Positives = 159/306 (51%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A R L V + P +I ++P+ T GDR L GG Sbjct: 1 MSAKIIRIATRQSPLALWQANHVREML--VKQWPNLSIELLPMITSGDRFLKDKLLSAGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL Sbjct: 59 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLLLTAICKRDNPFDALISPQFKSLAA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++IGTSSLRR++ LL + ++ + RG I TRL+KL + + AI+LA AG++R+ Sbjct: 119 LPKNAIIGTSSLRRQSQLLAYNPNLQIKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ + P+ QGA+CIE ++ + QELV +N + V+ ER A+L Sbjct: 179 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELVHGLNDPISALCVHTERRVNAKL 238 Query: 241 DGSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G+C A + L VL DG + + G +A I + + Sbjct: 239 GGNCHIPFAVYCTITEEKLLLLRAKVLNMDGSQMIDDEQQGKIAEAEVIADRCTESLMTK 298 Query: 300 SNKNVF 305 ++ Sbjct: 299 GAMSLL 304 >gi|102139875|gb|ABF70028.1| porphobilinogen deaminase, chloroplast (hydroxymethylbilane synthase) (pre-uroporphyrinogen synthase), putative [Musa acuminata] Length = 426 Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats. Identities = 126/301 (41%), Positives = 179/301 (59%), Gaps = 5/301 (1%) Query: 11 RCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 R SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGLFT+EI Sbjct: 123 RDSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGLFTKEI 182 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128 + L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L SV+G Sbjct: 183 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPAGSVVG 242 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188 ++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RL + + Sbjct: 243 SASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLNMAENATAV 302 Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248 L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+C++ I Sbjct: 303 LSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVACEREFLAVLDGNCRTPI 362 Query: 249 AGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFISNKNVF 305 A +AY + F G++ + DG E +R+G D + +G+DA ++ + F Sbjct: 363 AAYAYRDEDGNCSFRGLLASPDGSKVFETTRSGPYSFDDMVELGKDAGHELKAKAGPGFF 422 Query: 306 N 306 + Sbjct: 423 D 423 >gi|254498735|ref|ZP_05111451.1| porphobilinogen deaminase HemC [Legionella drancourtii LLAP12] gi|254352063|gb|EET10882.1| porphobilinogen deaminase HemC [Legionella drancourtii LLAP12] Length = 309 Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats. Identities = 102/306 (33%), Positives = 157/306 (51%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A R L + + P + ++P++T GD+ L +GG Sbjct: 1 MNSRIIHIATRQSPLALWQANHVRGLL--LKQWPMLQVELLPMTTSGDKFLKDKLLAVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ D AVHSAKDMP + GL ++A R++ DV +S L D Sbjct: 59 KGLFVKELEEALLDNRADIAVHSAKDMPAEFPAGLGLAAICKRDNPFDVLVSKHYAKLVD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR++ LL +R D+ + RG I TRL KL + + AI+LA AG++R+ Sbjct: 119 LPQQAIVGTGSLRRQSQLLAYRPDLCIKPLRGNINTRLAKLESGEYQAIILAAAGLERMG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E L+ + P+ QGA+ IE + + EL+ +N + V+ ER A L Sbjct: 179 FNHAISEQLSEQIMLPACAQGALAIECRTEDQEIHELLAGLNDPLSAVCVHTERQVNALL 238 Query: 241 DGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G+C +A F A + L+ +L DG + + G A + + AQ + Sbjct: 239 GGNCHVPLAVFCAPTTSNQLFLQAKILNQDGSKIIQNQQTGALDKATVLAYNCAQSLLTQ 298 Query: 300 SNKNVF 305 + Sbjct: 299 GAATLL 304 >gi|148234672|ref|NP_001090881.1| porphobilinogen deaminase [Sus scrofa] gi|112980813|gb|ABI29188.1| hydroxymethylbilane synthase [Sus scrofa] Length = 361 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K L Sbjct: 19 RVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE D + H ++L+ Sbjct: 77 FTKELEHALERNEVDLVVHSLKDLPTVLPPGFTIGAVCKRECPYDAVVFHPKFVGKTLET 136 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQRM 196 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 197 GWQNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 256 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + +G + + +G D Sbjct: 257 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLNGAESMQETMQATIHVPAQHEDGPEDDPQLV 316 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 317 GITARNIPREAQLAAENLGISLATLLLNKGAKNILDV 353 >gi|156742007|ref|YP_001432136.1| porphobilinogen deaminase [Roseiflexus castenholzii DSM 13941] gi|189028097|sp|A7NKU8|HEM3_ROSCS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|156233335|gb|ABU58118.1| porphobilinogen deaminase [Roseiflexus castenholzii DSM 13941] Length = 303 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 104/303 (34%), Positives = 161/303 (53%), Gaps = 3/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + IGTR S LAL R +L H P + + ++T+GD I +R L IG KG Sbjct: 2 RNSLTIGTRASKLALVQTHMIRDALQAAH--PGLTVAVERITTRGDIILDRPLNAIGDKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF EIE+ + +G +D AVHSAKD+P+ L + ++ R D RD ++ +L L Sbjct: 60 LFVVEIEEAMRAGRVDLAVHSAKDLPSTLPPDMTLAVCPRRADPRDALVAQPGMTLASLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR L R D++++D RG ++TRL KL + AI+LA AG+KRL E Sbjct: 120 HGARVGTSSLRRACQLRALRPDLTLLDLRGNVDTRLRKLREGQYDAIVLAAAGLKRLGLE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +VI E+L + P+ GQG I +E + + L+ ++ ++ ERAFLA + G Sbjct: 180 EVITELLEPDVLIPAVGQGIIGVEARAGDDEVLRLLAPLDDPAARAAITAERAFLARIGG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ + A +G L YG++ A DG+ R+G+ D +G A+ + + Sbjct: 240 GCRVPVGALALLEGDELLLYGMIGALDGR-MVRGMRSGSASDPAGLGSALAEELLDAGGQ 298 Query: 303 NVF 305 + Sbjct: 299 ALL 301 >gi|86158914|ref|YP_465699.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-C] gi|85775425|gb|ABC82262.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-C] Length = 314 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 99/300 (33%), Positives = 151/300 (50%), Gaps = 3/300 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLA A L D + P + + L T+GD+I L ++GGKGLF Sbjct: 2 IRIATRRSPLAKWQANHVSQLLRD--REPGLEVRLHELVTRGDKILEVPLADVGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ + + AVHS KD+P L GL +++ RED RD S ++L L + Sbjct: 60 KEIEDALLNRDAEVAVHSMKDLPAVLAPGLVLASVPQREDPRDALCSPRWKTLAALPKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR A L R D+ + RG +ETRL K + A++LAYAG++RL + Sbjct: 120 RVGTSSLRRSAQLKALRPDLQMEVVRGNVETRLRKASEG-LDAVVLAYAGLRRLGLAEHA 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + E+ P+ QGA+ +E ++ + + + +T + ER FLA ++G C+ Sbjct: 179 TYVFPPEEMLPAVAQGALALEARADDAPTLKRLAALEDPETRVRIEAERGFLARIEGGCQ 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IAG A G + +V + DG R G +A +G A+ + + Sbjct: 239 VPIAGHATLAGGKITIRALVASLDGTRVIRGERTGAYAEARALGESLAEELLSRGADQIL 298 >gi|159900065|ref|YP_001546312.1| porphobilinogen deaminase [Herpetosiphon aurantiacus ATCC 23779] gi|159893104|gb|ABX06184.1| porphobilinogen deaminase [Herpetosiphon aurantiacus ATCC 23779] Length = 300 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 108/301 (35%), Positives = 164/301 (54%), Gaps = 3/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IGTR S LAL R +L+ H P I + ++TKGD I +R L IG KGLF Sbjct: 3 ILTIGTRKSQLALVQTHAMRDALLAAH--PQLTIELEHITTKGDAILDRPLAAIGDKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 EIE + +G++D AVHSAKD+P+ L + I+AY R D RDV + + L DL Sbjct: 61 VSEIEDAMRNGKVDLAVHSAKDLPSILAPDMTIAAYPERADPRDVLVGAEGRRLADLVPG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSS RR A L R D+++ID RG ++TRL KL+ + AI+LA AG++RL K Sbjct: 121 AKVGTSSPRRAAQLRHLRPDLTIIDIRGNVDTRLRKLDEGQYDAIVLAAAGLQRLGLLKR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + + P+ QG + IE + + +L+KV++H ++ + E+AFLA + G C Sbjct: 181 VTQFFEPAEMTPAVSQGILGIEARAGDQRVADLLKVLDHAESRATAEAEKAFLATIGGGC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + A+ FA + L+ G++ A DG+ G+ A +G AQ + + + Sbjct: 241 QVAVGAFATYQIGQLHLIGMIGALDGR-LVRGELTGSASTAQALGTSLAQQLLAQGGREL 299 Query: 305 F 305 Sbjct: 300 L 300 >gi|294625631|ref|ZP_06704254.1| porphobilinogen deaminase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600054|gb|EFF44168.1| porphobilinogen deaminase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 304 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 113/301 (37%), Positives = 168/301 (55%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 3 TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ GE DCAVHS KD+P +L + + A L R D D +S+ SL+ L L Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDEPFVLPAILERGDPADALVSNLYASLQALPLG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEAR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC Sbjct: 181 ISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 +A FA +G L+ G+V ++ +G+ D +GR AQ + + Sbjct: 241 HVPVAAFARWEGQDLFLQGMVGSASDGRLIHADAHGSADDTEALGRRVAQGLFDKGAAQL 300 Query: 305 F 305 Sbjct: 301 L 301 >gi|294666828|ref|ZP_06732061.1| porphobilinogen deaminase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603412|gb|EFF46830.1| porphobilinogen deaminase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 304 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 113/301 (37%), Positives = 169/301 (56%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 3 TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ GE DCAVHS KD+P +L + + A L R D D +S+ SL+ L L Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDEPFVLPAILERGDPADGLVSNLYASLQALPLG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEAR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L+ ++ P+P QGA+ +E ++ + L+ V++ + T V ERA L GSC Sbjct: 181 ISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDADRTRACVEAERAMNRALHGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 +A FA +G L+ G+V ++ +G+ D +GR AQ + + Sbjct: 241 HVPVAAFARWEGQDLFLQGMVGSASDGRLIHADAHGSADDTEALGRRVAQGLFDKGAAQL 300 Query: 305 F 305 Sbjct: 301 L 301 >gi|259417591|ref|ZP_05741510.1| porphobilinogen deaminase [Silicibacter sp. TrichCH4B] gi|259346497|gb|EEW58311.1| porphobilinogen deaminase [Silicibacter sp. TrichCH4B] Length = 318 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 133/306 (43%), Positives = 182/306 (59%), Gaps = 5/306 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A+ETR L ++ P I+ + T GD +R L EIG Sbjct: 11 PLKIGTRGSPLALAQAYETRDRLARAFELEPTAFDIVVIKTTGDNRAMIDADRPLKEIGN 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L SG ID AVHS KDMPT+ +GL + YLPRED+RD F+S +++ D Sbjct: 71 KGLFTKEIEEALTSGGIDLAVHSMKDMPTEQPEGLMLDCYLPREDVRDAFVSPQIRAIAD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A A LA AG++RL Sbjct: 131 LPEGAVVGTSSLRRRAQLLHRRPDLQVVEFRGNVQTRLQKLQDGVASATFLAMAGLRRLN 190 Query: 181 K-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E+V + ED P+ QGAI IE ++ A +++ I+H +T + ERAFLA Sbjct: 191 MAEEVPATPIAPEDMLPAVAQGAIGIERRSDDTTAAAMLEAIHHAETSLRLAAERAFLAA 250 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 LDGSC++ IA A G TL G +L DG ++ D +GR + +R Sbjct: 251 LDGSCETPIAALADLSGGTLQLRGQILRPDGSEALADQQSCAIEDGAELGRRMGEALRAR 310 Query: 300 SNKNVF 305 + + F Sbjct: 311 AGEGFF 316 >gi|193215989|ref|YP_001997188.1| porphobilinogen deaminase [Chloroherpeton thalassium ATCC 35110] gi|238058923|sp|B3QWI1|HEM3_CHLT3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|193089466|gb|ACF14741.1| porphobilinogen deaminase [Chloroherpeton thalassium ATCC 35110] Length = 314 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 120/294 (40%), Positives = 172/294 (58%), Gaps = 6/294 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK IGTR SPLAL A ++ L + P +I + + T GD+I + L +IG KG Sbjct: 2 KKALIIGTRSSPLALWQAEFIKAELSKHY--PSLDISLRHIKTTGDKILDAPLAKIGDKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT EIE ++ EID AVHS KD+PT+ +GL I+A RED RDV IS +LK L Sbjct: 60 LFTREIEHVMLRNEIDLAVHSLKDLPTETPEGLVITAITEREDNRDVLISKGKYTLKTLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++ TSSLRR++ LL R D+ VID RG + TR + A A+LLA+AG+ RL+ Sbjct: 120 QGAIVATSSLRRRSQLLHLRPDLEVIDMRGNLNTRFKRFEEGDAEAMLLAFAGVHRLEFS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I EI++ +D P+ GQGA+ IET +++ + +EL+KV+NH +T CER+ L L+G Sbjct: 180 EHIAEIISFDDILPAVGQGALGIETRIDDEETRELLKVLNHAETELCTKCERSLLRTLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN----GNRCDAINIGRDA 292 C+ I A + T +F V + DGK + S + +A IG + Sbjct: 240 GCQIPIGAHARIENGTFHFATYVGSIDGKRAIKKSLSRENVTTVEEAEQIGIEV 293 >gi|118101810|ref|XP_417846.2| PREDICTED: similar to Hydroxymethylbilane synthase [Gallus gallus] Length = 358 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 156/338 (46%), Gaps = 35/338 (10%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LA L + + P I+ +ST GD+I + L++IG K Sbjct: 15 SRAIRVGTRRSQLARIQTDSVVEMLREFY--PDLCFEIVAMSTTGDKILDTALSKIGEKS 72 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 73 LFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAICKRENPLDAVVFHPKNCGKTLS 132 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKR 178 L SVIGTSSLRR A L + + D RG + TRL KL+ + AI+LA AG+KR Sbjct: 133 VLPEKSVIGTSSLRRAAQLKKKFPQLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGLKR 192 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E I ++L+ ED + GQGA+ +E + + +V + +T ERAF+ Sbjct: 193 MGWENRIGQLLSPEDCLYAVGQGALAVEVRAKDQETLNMVSALQDGETVLCCIAERAFMK 252 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 253 RLEGGCSVPVAVNTMLKDGQLYLTGAVYSLDGSDSLKETMQTSVNYPHRNEDGPNDDVQH 312 Query: 285 ---------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G + A + K++ + Sbjct: 313 VGITAKNVPGQAQEAAENLGIELASLLLSKGAKHILSV 350 >gi|168057909|ref|XP_001780954.1| predicted protein [Physcomitrella patens subsp. patens] gi|162667588|gb|EDQ54214.1| predicted protein [Physcomitrella patens subsp. patens] Length = 299 Score = 345 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 127/299 (42%), Positives = 179/299 (59%), Gaps = 4/299 (1%) Query: 13 SPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEK 70 SPLALA A++TR L H + II + T GD+I ++ L +IGGKGLFT+EI+ Sbjct: 1 SPLALAQAYQTRDKLKAAHPGLAEEGALEIIIIKTTGDKILSQPLADIGGKGLFTKEIDD 60 Query: 71 KLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTS 130 L++G+ID AVHS KD+PT L +G + LPRED+RD FI SL +L SV+G++ Sbjct: 61 ALLNGDIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICPNYSSLAELPEGSVVGSA 120 Query: 131 SLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILN 190 SLRR++ +L + V +FRG ++TRL KL+ A LLA AG+KRL + I IL Sbjct: 121 SLRRQSQILHKYPHLKVENFRGNVQTRLRKLSEGTVQATLLALAGLKRLDMTEHITAILA 180 Query: 191 IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250 +D P+ QGAI I + K +E + +NHE T +++CERAFLA+LDGSC++ IAG Sbjct: 181 TDDMLPAIAQGAIGIACRTGDSKMEEYLASLNHEGTRLAISCERAFLAKLDGSCRTPIAG 240 Query: 251 FAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFISNKNVFNF 307 A F G+V +DGK E SR G + D I + +DA + + + F + Sbjct: 241 LAERTEDGCSFRGLVATTDGKQVLETSRKGSFSYDDMIALAQDAGAELISRAGPDFFKW 299 >gi|313199811|ref|YP_004038469.1| porphobilinogen deaminase [Methylovorus sp. MP688] gi|312439127|gb|ADQ83233.1| porphobilinogen deaminase [Methylovorus sp. MP688] Length = 320 Score = 345 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 103/302 (34%), Positives = 154/302 (50%), Gaps = 2/302 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A ++ L ++ P + I+ ++T GD+I + L IGGKGLF Sbjct: 12 KLVIASRESALAMWQARHIQARLQALY--PSTQVEILGMTTTGDQILDSPLARIGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E+ L G D AVHS KD+P L +G ++A RED RD F+S+ SL+ L Sbjct: 70 VKELEQALADGRADLAVHSMKDVPMHLPEGFAMAAIGEREDPRDAFVSNDYPSLEALPAG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S++GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+ RL Sbjct: 130 SIVGTSSLRRQSQLQARFPHLVIESLRGNLQTRLRKLDEGQYAAIILAAAGLIRLGLGNR 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + + ED P+ GQGA+ IE + ++ +NH DT V ER L GSC Sbjct: 190 IAQTIAPEDSIPAVGQGALGIEINAARTDLLTVLAPLNHADTAACVEAERGMSRALAGSC 249 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A G + +G V + DGK GN +G+ AQ + + Sbjct: 250 TVPLGAYATKLGENITIHGFVASVDGKQMLRAEATGNAAKPELLGQQLAQSLIARGADKI 309 Query: 305 FN 306 Sbjct: 310 LQ 311 >gi|325918388|ref|ZP_08180519.1| hydroxymethylbilane synthase [Xanthomonas vesicatoria ATCC 35937] gi|325535411|gb|EGD07276.1| hydroxymethylbilane synthase [Xanthomonas vesicatoria ATCC 35937] Length = 304 Score = 345 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 114/301 (37%), Positives = 167/301 (55%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 3 TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ SL+ L L Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDDPFVLPAILGRGDAADALVSNLYASLQALPLG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL + Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLDAR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L+ D+ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC Sbjct: 181 ISARLDAPDWLPAPAQGAVAVECRGDDARIHALLAVLDAPTTRVCVEAERAMNRALHGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 +A FA +G LY G+V ++ +G+ D +GR AQ + + Sbjct: 241 HVPVAAFATWEGEGLYLQGMVGSASDGRLIHADAHGSAGDTEELGRRVAQGLFDKGAAQL 300 Query: 305 F 305 Sbjct: 301 L 301 >gi|87117972|gb|ABD20293.1| HemC [Shigella boydii] Length = 272 Score = 345 bits (886), Expect = 4e-93, Method: Composition-based stats. Identities = 97/267 (36%), Positives = 145/267 (54%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T GD I + L ++ GKGLF +E++ L+ D AVHS KD+P + + Sbjct: 6 PGLVVELVPMVTPGDVILDTPLAKVCGKGLFVKELDVALLENRADIAVHSMKDVPVEFPQ 65 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+T SL L S++GTSSLRR+ L R D+ + RG Sbjct: 66 GLGLVTICEREDPRDAFVSNTYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +N+ + Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEVSLPAVGQGAVGIECRLNDTR 185 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 + L+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 186 TRALLAALNHNETALRVTAERAMNTRLEGGCQVPIGSYAELVDGEIWLLALVGAPDGSQI 245 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300 R G+ DA + A+ + Sbjct: 246 IRGERRGSPQDAEQMSVSLAEELLNNG 272 >gi|146329177|ref|YP_001209219.1| porphobilinogen deaminase [Dichelobacter nodosus VCS1703A] gi|158513296|sp|A5EW83|HEM3_DICNV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|146232647|gb|ABQ13625.1| porphobilinogen deaminase [Dichelobacter nodosus VCS1703A] Length = 305 Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats. Identities = 102/301 (33%), Positives = 155/301 (51%), Gaps = 3/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL A L + P + ++P+ T+GD + + L++IGGK LF Sbjct: 3 TLRIATRKSPLALWQAEHVAQQLKQHY--PELTVELVPIVTQGDILAHTPLSKIGGKNLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E + D AVHS KD+ L +G ++A LPRE+ D +S+ L +L Sbjct: 61 IKELEIAMQQNAADIAVHSMKDVGVTLPEGFVLAAILPRENPFDALVSNHYAHLNELPNG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT SLRRK L +R D+ +ID RG + TRL KL++ A++LA AG+ RL++ Sbjct: 121 ARVGTCSLRRKMQLAHYRPDLKLIDIRGNVHTRLQKLDSGAFDALILACAGLIRLQQNAR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I++IL E P+ GQGAI +E ++P ++ +NH +T V ER L G C Sbjct: 181 IRQILPAEISLPAIGQGAIGVECRADSP-FLAHIQTLNHFETAVCVQTERVVNQRLQGDC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + IA FA G T+ + DG+ DA G A+ + +++ Sbjct: 240 QVPIAVFATLSGKTMTLQSRIGTIDGQRMLAHQEICALEDAEKAGARCAEALIQQGAQDI 299 Query: 305 F 305 Sbjct: 300 L 300 >gi|170749246|ref|YP_001755506.1| porphobilinogen deaminase [Methylobacterium radiotolerans JCM 2831] gi|170655768|gb|ACB24823.1| porphobilinogen deaminase [Methylobacterium radiotolerans JCM 2831] Length = 307 Score = 345 bits (885), Expect = 5e-93, Method: Composition-based stats. Identities = 122/291 (41%), Positives = 174/291 (59%), Gaps = 2/291 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +P RIGTR SP+ALA R ++ + P ++ ++T D+I +R L+EIGG Sbjct: 1 MLNRPLRIGTRGSPMALAQTGMVRDRIVAAN--PGLETELVVVTTVADKILDRPLSEIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ L +GE+D AVHS KD+ T L GL I+ L R+D RD F+S A L Sbjct: 59 KGLFTKELEQALFAGEVDVAVHSMKDVETWLPDGLTIACILERDDPRDAFLSPHADGLAG 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LA + +GTSSLRR A +L R D+ V+ RG TR+ KL + A LLA AG++RL Sbjct: 119 LAAGARVGTSSLRRGAQVLMRRPDLRVVPLRGNANTRMRKLEAGECDATLLALAGLQRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E + + +L++E+ P+ QGA+ IE ++ ++L+ I E T +V+ ERA LAEL Sbjct: 179 LESMARSVLSVEEMLPAVAQGALGIECRADDAVIRDLLAPIACERTTVAVSAERALLAEL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 DGSC++ IA A G +L G++ DG SR G +A IGR+ Sbjct: 239 DGSCRTPIAALAQIDGDSLRIDGLLFLPDGSRHWAASRQGLVAEAERIGRE 289 >gi|258545718|ref|ZP_05705952.1| hydroxymethylbilane synthase [Cardiobacterium hominis ATCC 15826] gi|258519035|gb|EEV87894.1| hydroxymethylbilane synthase [Cardiobacterium hominis ATCC 15826] Length = 310 Score = 345 bits (885), Expect = 6e-93, Method: Composition-based stats. Identities = 107/301 (35%), Positives = 162/301 (53%), Gaps = 3/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LAL A + L + P + ++P++T+GD+I + L IGGKGLF Sbjct: 8 IRIATRESKLALWQAEHVAARLRAHY--PHLAVRLVPMTTRGDQILDAPLARIGGKGLFI 65 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ + GE D AVHS KD+ L +G +I+A LPRE+ D F+S+ SL +L + Sbjct: 66 KELEQAMARGEADIAVHSMKDVGVHLPEGFRIAAILPRENPHDAFVSNHYASLAELPPGA 125 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT SLRR+ L R R D+ ++D RG ++TRL+KL+ AI+LA AG+ RL + I Sbjct: 126 RVGTCSLRRRMQLARLRPDLKLLDLRGNVQTRLDKLDRGDFDAIVLACAGLIRLGLQARI 185 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGAI IE H L+ ++ DT V+ ER L+GSC+ Sbjct: 186 RAELPPEQSLPAIGQGAIGIECHE-TSAVYPLLAALDDADTALCVHTERIINTHLEGSCQ 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A A G ++ + DG + + + R DA +G A + +++ Sbjct: 245 VPLAAHAALHGERIHLAARIGMPDGSRYLSAADDAPRRDAEALGNHIAARLIADGARDIL 304 Query: 306 N 306 Sbjct: 305 Q 305 >gi|237752686|ref|ZP_04583166.1| porphobilinogen deaminase [Helicobacter winghamensis ATCC BAA-430] gi|229376175|gb|EEO26266.1| porphobilinogen deaminase [Helicobacter winghamensis ATCC BAA-430] Length = 310 Score = 345 bits (885), Expect = 6e-93, Method: Composition-based stats. Identities = 105/309 (33%), Positives = 165/309 (53%), Gaps = 9/309 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+K IGTR S LAL A ++ L + + P + + + TKGD+I + L +IGG Sbjct: 1 MQK--LTIGTRGSVLALWQANHIKNLLEE--RYPKLEVELKIVKTKGDKILDVPLAKIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E L+ G+ID AVHS KD+P + +GL ++A RED+RD F+S ++L D Sbjct: 57 KGLFTKELEVLLLEGDIDLAVHSLKDVPVEFTQGLGLAAITKREDVRDSFLSFKYKNLGD 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRR + R D+ RG ++TRL +L N + AI+LA AG+ RL+ Sbjct: 117 LPKGAKVGTTSLRRVMQINALRGDLDCQSLRGNVQTRLQRLENEEFDAIILAQAGVNRLE 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + I ++ P+ GQ A+ IE ++ EL+ +N ++ +CERAF+ L Sbjct: 177 LKGIPY-ITPLDFMVPAMGQAALGIECKKDSNYV-ELLSFLNDKNAVFETHCERAFVRVL 234 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDAAQYIR 297 +G C+ I A +L I+ DG + S + D IG+ A+ Sbjct: 235 NGGCQVPIGINARYNEGSLEVRAILGLPDGSEIIKENLESEVSSIKDCEYIGKTLAESFL 294 Query: 298 FISNKNVFN 306 + + Sbjct: 295 NQGAREILQ 303 >gi|218533190|ref|YP_002424006.1| porphobilinogen deaminase [Methylobacterium chloromethanicum CM4] gi|218525493|gb|ACK86078.1| porphobilinogen deaminase [Methylobacterium chloromethanicum CM4] Length = 309 Score = 345 bits (885), Expect = 6e-93, Method: Composition-based stats. Identities = 122/304 (40%), Positives = 174/304 (57%), Gaps = 3/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIGTR SP+ALA R ++ + P I+ +ST DR+ +R L+EIGGKG Sbjct: 4 SRALRIGTRGSPMALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIGGKG 61 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKDL 121 LFT+E+E+ L + EID AVHS KD+ T L GL I+ L R+D RD F+S + L DL Sbjct: 62 LFTKELEQALFADEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSSLRR A +L R D++++ RG TR+ KL + A LLA AG++RL Sbjct: 122 PPGARVGTSSLRRGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGM 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E V + +L++E+ P+ QGA+ IE + + L+ + T +++ ER LAELD Sbjct: 182 EDVARSVLSVEEMLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELD 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC++ IA A KG + G++ DG EV R G DA IGRDA ++ + Sbjct: 242 GSCRTPIAALAQVKGDRISLDGLLFLPDGSRHWEVHREGLAADADAIGRDAGAELKRAAG 301 Query: 302 KNVF 305 F Sbjct: 302 DVYF 305 >gi|289667461|ref|ZP_06488536.1| porphobilinogen deaminase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 304 Score = 345 bits (885), Expect = 6e-93, Method: Composition-based stats. Identities = 111/301 (36%), Positives = 167/301 (55%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 3 TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ G+ DCAVHS KD+P +L + A L R D D +S+ SL+ L L Sbjct: 61 LKELELAMLRGDADCAVHSLKDVPMELDDPFVLPAILERGDPADALVSNLYASLQALPLG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL + Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLDAR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC Sbjct: 181 ISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 +A FA +G L+ G+V ++ +G+ D +GR AQ + + Sbjct: 241 HVPVAAFARWEGEGLFLQGMVGSASDGRLIHADAHGSADDTEALGRRVAQGLFDKGAAQL 300 Query: 305 F 305 Sbjct: 301 L 301 >gi|197121772|ref|YP_002133723.1| porphobilinogen deaminase [Anaeromyxobacter sp. K] gi|220916566|ref|YP_002491870.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-1] gi|196171621|gb|ACG72594.1| porphobilinogen deaminase [Anaeromyxobacter sp. K] gi|219954420|gb|ACL64804.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-1] Length = 314 Score = 345 bits (885), Expect = 7e-93, Method: Composition-based stats. Identities = 101/300 (33%), Positives = 149/300 (49%), Gaps = 3/300 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLA A L D + P + + L T+GD+I L ++GGKGLF Sbjct: 2 IRIATRRSPLAKWQANHVSQLLRD--REPGLEVRLHELVTRGDKILEVPLADVGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ + + AVHS KD+P L GL ++A RED RD S ++L L + Sbjct: 60 KEIEDALLNRDAEVAVHSMKDLPAVLAPGLVLAAVPQREDPRDALCSPRWKTLAALPKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR A L R D+ + RG +ETRL K + A++LAYAG++RL + Sbjct: 120 RVGTSSLRRSAQLKALRPDLQMEMVRGNVETRLRKASEG-LDAVVLAYAGLRRLGLAEHA 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + E+ P+ QGA+ +E ++ + + DT + ER FLA ++G C+ Sbjct: 179 TYVFPPEEMLPAVAQGALALEARADDAPTLARLAALEDPDTRVRIEAERGFLARIEGGCQ 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IAG A G + +V + DG R G +A +G A + + Sbjct: 239 VPIAGHATLAGGKVTIRALVASLDGARVIRGERTGAYAEARAMGESLADELLSRGADQIL 298 >gi|295095182|emb|CBK84272.1| hydroxymethylbilane synthase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 273 Score = 344 bits (884), Expect = 7e-93, Method: Composition-based stats. Identities = 100/263 (38%), Positives = 142/263 (53%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 + T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +GL + Sbjct: 1 MVTRGDVILDTPLAKVGGKGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICE 60 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 RED RD F+S+ SL L SV+GTSSLRR+ L R D+ + RG + TRL KL+ Sbjct: 61 REDPRDAFVSNRYDSLDALPAGSVVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLGKLD 120 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 N AI+LA AG+KRL E+ I+ L E P+ GQGA+ IE + + + Q L+ +N Sbjct: 121 NGDYDAIILAVAGLKRLGLEERIRVALPPELSLPAVGQGAVGIECRLVDARTQALLAPLN 180 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 H+DT V ERA L+G C+ I +A L+ +V A DG R G Sbjct: 181 HDDTAVRVKAERAMNTRLEGGCQVPIGSYAELTDGELWLRALVGAPDGSQMVRGERRGKP 240 Query: 283 CDAINIGRDAAQYIRFISNKNVF 305 DA +G A+ + + + Sbjct: 241 QDAEALGVSLAEELLNNGAREIL 263 >gi|303257759|ref|ZP_07343771.1| hydroxymethylbilane synthase [Burkholderiales bacterium 1_1_47] gi|331001196|ref|ZP_08324823.1| hydroxymethylbilane synthase [Parasutterella excrementihominis YIT 11859] gi|302859729|gb|EFL82808.1| hydroxymethylbilane synthase [Burkholderiales bacterium 1_1_47] gi|329569128|gb|EGG50920.1| hydroxymethylbilane synthase [Parasutterella excrementihominis YIT 11859] Length = 310 Score = 344 bits (884), Expect = 7e-93, Method: Composition-based stats. Identities = 106/304 (34%), Positives = 163/304 (53%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++ I TR SPLAL A +S L + K P ++ ++ L+TKGD+I + TL++IGGK Sbjct: 3 QQDHLVIATRESPLALWQAKYVQSCLKE--KFPELDVQLLGLTTKGDKILDVTLSKIGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G+ AVHS KD+P LL+ ++A + RED RD +SH SL+++ Sbjct: 61 GLFVKELEAAMLEGKAQIAVHSLKDVPMDLLEPFTLAAVMVREDPRDAVVSHKYASLEEM 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SV+GTSSLRR+ ++ + V RG + TRL+KL+N + +++A AG+KRL Sbjct: 121 PAGSVVGTSSLRRELMVRSRFPHLKVEMIRGNVGTRLSKLDNGQYDTLVMAVAGLKRLGL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I+ I+ E P+PGQGAI IE N+ Q+ V+ +N EDT ERA L Sbjct: 181 SDRIRSIIPPEVSLPAPGQGAIGIEAVGNDEMTQKYVEALNDEDTRLCTQAERAVSRALG 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC+ +A +A ++ +V + G + R + Sbjct: 241 GSCQVPLAAYATIDDGQMFLRALVGNHMTGEYVTAEYTGLANEPEENARKVLDQLIEKGA 300 Query: 302 KNVF 305 K + Sbjct: 301 KRLL 304 >gi|154148130|ref|YP_001406461.1| porphobilinogen deaminase [Campylobacter hominis ATCC BAA-381] gi|166201500|sp|A7I1S0|HEM3_CAMHC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|153804139|gb|ABS51146.1| porphobilinogen deaminase [Campylobacter hominis ATCC BAA-381] Length = 308 Score = 344 bits (884), Expect = 7e-93, Method: Composition-based stats. Identities = 114/307 (37%), Positives = 166/307 (54%), Gaps = 8/307 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR S LAL + ++ + + + + TKGD I + L +IGG Sbjct: 1 MNK--LRIATRGSALALWQSKYIQNLIE---NNTEVEVELQSMKTKGDVILDTPLAKIGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ ++ GE D AVHS KD+P KGL ++A RED+RD F+S S + Sbjct: 56 KGLFTKELEESMLRGESDLAVHSLKDVPVVFPKGLILTAISEREDVRDSFVSEKFASFNE 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRRK LL R D+ +I RG I TRL KL N+ AI+LA AG+KRL Sbjct: 116 LPKGAKVGTTSLRRKMQLLIKRPDLKIISLRGNINTRLRKLKENEFDAIILASAGLKRLN 175 Query: 181 KEKVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + IK + +++ P+ GQGA+ IE V+ + E++K IN+E++ + ER F+A Sbjct: 176 LMENIKYFVPFSLDEMIPAMGQGALGIEC-VDKSEVIEILKFINNENSVIATTIERDFVA 234 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +L+G C+ I A G + IV DG F + R ++ D N G A Sbjct: 235 KLNGGCQVPIGVNAEISGDIIKVRAIVGLPDGSEFIKDKREISKADFKNFGTKLADEFIS 294 Query: 299 ISNKNVF 305 + Sbjct: 295 RGAIELL 301 >gi|170738754|ref|YP_001767409.1| porphobilinogen deaminase [Methylobacterium sp. 4-46] gi|168193028|gb|ACA14975.1| porphobilinogen deaminase [Methylobacterium sp. 4-46] Length = 311 Score = 344 bits (884), Expect = 8e-93, Method: Composition-based stats. Identities = 116/304 (38%), Positives = 172/304 (56%), Gaps = 2/304 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEI 58 M +P RIGTR SP+ALA R + H P + ++ ++T DRI +R L+ I Sbjct: 1 MAHRPLRIGTRGSPMALAQTGMVRDRIAAAHPHLAEPGAMELVVVNTVADRILDRPLSAI 60 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLFT+E+E+ L +GEID AVHS KD+ T L GL I+ L R+D RD F+S + SL Sbjct: 61 GGKGLFTKELEQALFAGEIDVAVHSMKDVETWLPDGLVIACILERDDPRDAFLSLASGSL 120 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L + +GTSSLRR A +L R D+ ++ RG TR+ KL A LLA AG++R Sbjct: 121 AELPAGARVGTSSLRRGAQVLMRRPDLRIVPLRGNANTRIRKLEEGVCDATLLAIAGLER 180 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + + ++ +E+ P+ QGA+ IE + L++ + T ++ ER LA Sbjct: 181 LGLAHLARTVIPVEEMLPAVAQGALGIECRAADEDVIALLQAVACPRTTTALAAERGLLA 240 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 ELDGSC++ IA A G L G++ DG +R+G +A +IGR+A ++ Sbjct: 241 ELDGSCRTPIAALAQIDGDRLTLDGLLFLPDGSAHWATTRSGPAAEAASIGREAGADLKA 300 Query: 299 ISNK 302 + + Sbjct: 301 QAGE 304 >gi|118594154|ref|ZP_01551501.1| porphobilinogen deaminase [Methylophilales bacterium HTCC2181] gi|118439932|gb|EAV46559.1| porphobilinogen deaminase [Methylophilales bacterium HTCC2181] Length = 305 Score = 344 bits (884), Expect = 8e-93, Method: Composition-based stats. Identities = 102/302 (33%), Positives = 160/302 (52%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R SPLA+ A ++ L +++ P +I I T+GD I +++L IGGKGL Sbjct: 3 KKITIASRESPLAMWQAEHIKTQLNNLY--PYLSIYIKGFKTQGDIILDQSLATIGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ L+ E D AVHS KD+P + + Q+SA RED RD FIS +SL D+ Sbjct: 61 FIKELEQALLKKEADLAVHSMKDLPMDIYEDFQLSAITAREDPRDAFISLKYKSLDDMPD 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR++ + + + RG ++TRL+KL + AI+LA AG+ RL + Sbjct: 121 GAIVGTSSLRRQSQIKAKYPSLIIEPLRGNLQTRLSKLKKGQYGAIILAAAGLIRLDLQD 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I ++ P+ GQGA+ IE +N + L+K +N +DT V ER L GS Sbjct: 181 QITMYIDKNVSIPAVGQGALGIEILSSNTELDLLLKPLNDDDTSRCVLAERMVSRSLAGS 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C + A+ + + G V + +G+ G + D +G +Q + K Sbjct: 241 CTVPLGAHAFINKNAMVINGFVASPNGEKIIHAEMKGVKADFYKLGESLSQLLIDQGAKT 300 Query: 304 VF 305 + Sbjct: 301 LL 302 >gi|54020779|ref|NP_001005635.1| hydroxymethylbilane synthase [Xenopus (Silurana) tropicalis] gi|49250823|gb|AAH74624.1| hydroxymethylbilane synthase [Xenopus (Silurana) tropicalis] Length = 351 Score = 344 bits (884), Expect = 9e-93, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 148/337 (43%), Gaps = 35/337 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K R+GTR S LA L + P + I+ +ST GD+I + L++IG K Sbjct: 7 NKHVIRVGTRKSQLARIQTDSVVEMLSK--RFPSTHFDIVAMSTTGDKILDTALSKIGEK 64 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H +L Sbjct: 65 SLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPYDAVVFHPKRYGNTL 124 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIK 177 L SVIGTSSLRR A L + + D RG + TR+ KL+ + AI+LA AG++ Sbjct: 125 STLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRMKKLDEKEDFSAIILAAAGLR 184 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + I +IL ++ + GQGA+ IE + +V + +T ERAF+ Sbjct: 185 RMGWKNRIGQILTSDECLYAVGQGALAIEVRAKDQDILSMVSALQDPETVLRCIAERAFM 244 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV-----------SRNGNRCD-- 284 L+G C +A K S LY G V + DG + G D Sbjct: 245 KRLEGGCSVPVAVNTVVKDSQLYLTGAVYSLDGSDSLKETMQSCINFPQQEVEGPNDDVQ 304 Query: 285 ----------------AINIGRDAAQYIRFISNKNVF 305 A +G A + K + Sbjct: 305 HVGITALGVSHQALESAECLGTGLADLLLSKGAKEIL 341 >gi|325927040|ref|ZP_08188311.1| hydroxymethylbilane synthase [Xanthomonas perforans 91-118] gi|325542591|gb|EGD14062.1| hydroxymethylbilane synthase [Xanthomonas perforans 91-118] Length = 304 Score = 344 bits (884), Expect = 9e-93, Method: Composition-based stats. Identities = 113/301 (37%), Positives = 167/301 (55%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 3 TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ SL+ L L Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYASLQALPLG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEAR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC Sbjct: 181 ISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 +A FA +G L+ G+V ++ +G+ D +GR AQ + + Sbjct: 241 HVPVAAFARWEGQGLFLQGMVGSASDGRLIHADAHGSAEDTEALGRRVAQGLFDKGAAQL 300 Query: 305 F 305 Sbjct: 301 L 301 >gi|126326558|ref|XP_001370512.1| PREDICTED: similar to Porphobilinogen deaminase (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) (PBG-D) [Monodelphis domestica] Length = 344 Score = 344 bits (883), Expect = 9e-93, Method: Composition-based stats. Identities = 109/337 (32%), Positives = 158/337 (46%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + L D++ P II +ST GD+I + L++IG K L Sbjct: 2 RVIRVGTRKSQLARIQTDSVVAMLKDIY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKD 120 FT+E+E L E+D VHS KD+PT L I A RE D I H T Q+L Sbjct: 60 FTKELEYALEKNEVDLVVHSLKDLPTVLPPAFTIGAVCKRESPYDAVIFHPKYTGQTLGT 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179 L SVIGTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 120 LPERSVIGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILAAAGLQRM 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + ++L E+ + GQGA+ +E + + +LV+V++ +T ERAFL Sbjct: 180 GWQSRVGQLLYPEECLYAVGQGALGVEVRAKDQEVLDLVQVLHDPETLLRCIAERAFLRH 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 240 LEGGCSVPVAVDTTLKDGQLYLTGGVWSLDGSDSLKETMQTTINDSAQHEDGPEDDVQRV 299 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + +N+ + Sbjct: 300 GITAQHISQGVQRAAENLGISLANLLLNKGARNILDV 336 >gi|85858418|ref|YP_460620.1| porphobilinogen deaminase [Syntrophus aciditrophicus SB] gi|123738772|sp|Q2LQU2|HEM3_SYNAS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|85721509|gb|ABC76452.1| porphobilinogen deaminase [Syntrophus aciditrophicus SB] Length = 306 Score = 344 bits (883), Expect = 9e-93, Method: Composition-based stats. Identities = 100/301 (33%), Positives = 161/301 (53%), Gaps = 2/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LAL + + L + P ++ I+ + T GD + L +IGGKGLF Sbjct: 1 MKIGTRGSALALTQTRQIAARLQ--GQYPEMHLEIVVIKTSGDIQKDVPLAKIGGKGLFI 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L++G +D AVHS KD+P +L +GLQI+A RED RDV IS + +L + Sbjct: 59 KEIEEALLAGTVDLAVHSMKDLPAELPEGLQIAAVPRREDPRDVLISGICREFDNLPAGA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGT SLRR L WR D+ ++ RG ++TR+ K+ +++A AGI+R+ + + Sbjct: 119 RIGTGSLRRSVQLRDWRPDLEIVPLRGNLDTRIRKVAQAALDGVVVAAAGIRRMGWAEKV 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + E P+ GQG +C+ET + + + + + T V ERAFL L G C Sbjct: 179 TQFIPTEKMLPAVGQGVLCLETREEDEDLKAGLAFLEDKRTRREVTAERAFLRRLGGGCT 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A FA +G L G+V + + + G+ A+++G + A+ + + + Sbjct: 239 LPVAAFAEQRGDVLTIRGMVGSLNERTMIRQEIYGSVEQAVDLGTELAERLLDGGGRILL 298 Query: 306 N 306 Sbjct: 299 E 299 >gi|323136449|ref|ZP_08071531.1| porphobilinogen deaminase [Methylocystis sp. ATCC 49242] gi|322398523|gb|EFY01043.1| porphobilinogen deaminase [Methylocystis sp. ATCC 49242] Length = 308 Score = 344 bits (883), Expect = 9e-93, Method: Composition-based stats. Identities = 133/296 (44%), Positives = 178/296 (60%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RIGTR SPLALA R++L H + + I + T GD+I +R L+E GG Sbjct: 1 MTVRSLRIGTRGSPLALAQTHMIRAALAQAHGVAEDHFAIEIIKTTGDQIQDRPLSESGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E++ LI+G+ID AVHS+KD+PT L + I+ YLPRED RD +I +L Sbjct: 61 KGLFTKELDSALIAGDIDLAVHSSKDLPTHLPAEIVIAGYLPREDARDAWIGRNGVTLDQ 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT+SLRR A + R R D+ RG + TRLNK+ + A LLA AG+KRL Sbjct: 121 LPAGAVVGTASLRRAAQVKRLRPDVQTTLLRGNVHTRLNKVERGEIDATLLALAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +L ++DFPP+ GQGAI I + N+P+ + + + E T ++ ERAFLA L Sbjct: 181 LADRATALLPLDDFPPAVGQGAIGITSRANDPETRAALAPLLDEATALALLAERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 DGSC++ IAG A K L FYG VL +DG V R+G DA IG DA I Sbjct: 241 DGSCRTPIAGHATVKDGDLTFYGEVLKADGSEVWIVRRHGRAIDAAMIGADAGNEI 296 >gi|212275007|ref|NP_001130048.1| hypothetical protein LOC100191140 [Zea mays] gi|194688160|gb|ACF78164.1| unknown [Zea mays] Length = 394 Score = 344 bits (883), Expect = 9e-93, Method: Composition-based stats. Identities = 131/299 (43%), Positives = 180/299 (60%), Gaps = 5/299 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGL Sbjct: 48 IRIGTRGSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGL 107 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L Sbjct: 108 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPA 167 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+G++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RLK + Sbjct: 168 GSVVGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLKMAE 227 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+ Sbjct: 228 NATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVTCEREFLAVLDGN 287 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFI 299 C++ IA +AY F G++ + DG E +R+G D + +G+DA +R Sbjct: 288 CRTPIAAYAYRDKDGNCSFRGLLSSPDGSKVFETARSGPYSFDDMVEMGKDAGHELRRR 346 >gi|66809519|ref|XP_638482.1| porphobilinogen deaminase [Dictyostelium discoideum AX4] gi|74854142|sp|Q54P93|HEM3_DICDI RecName: Full=Porphobilinogen deaminase; AltName: Full=Heme biosynthesis protein C; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS gi|60467077|gb|EAL65118.1| porphobilinogen deaminase [Dictyostelium discoideum AX4] Length = 325 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 96/316 (30%), Positives = 157/316 (49%), Gaps = 14/316 (4%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++ IG+R S LA+ R + +++ P + I + T GD++ + +L++IG K Sbjct: 6 KRDKVIIGSRKSQLAMLQTEWVRDRIQELN--PGIIVEIKTMDTTGDKVLDVSLSKIGDK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH-----TAQ 116 GLFT+E+E +++G ID AVHS KD+PTKL GL++ A R + D FI++ Sbjct: 64 GLFTKELEDMMLNGTIDLAVHSLKDIPTKLPDGLKLGAITKRYNTSDAFIANAKKHGKNC 123 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYA 174 L +L ++IG+SSLRR A L + + D RG + TR KL + N ++LA A Sbjct: 124 KLSELPQGAMIGSSSLRRVAQLKKAYPHLQFKDIRGNLNTRFKKLEDDSNGYDGMILAVA 183 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G++R++ I EI+ + GQG++ IE + Q ++ + H ++ ER Sbjct: 184 GLERMELTDHISEIIPDSISLYAVGQGSLGIECKDGDDFIQSILNPLIHRESMYCCEAER 243 Query: 235 AFLAELDGSCKSAIAGFAYCK-----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 + L +L+G C I TL IVL DG + E G +G Sbjct: 244 SMLRDLEGGCHVPIGVVTKLHNQSQPDETLEINAIVLNLDGSKYIESKIIGPSIQYYQLG 303 Query: 290 RDAAQYIRFISNKNVF 305 + AQ + +K++ Sbjct: 304 KSIAQDLINKGSKDIL 319 >gi|254283408|ref|ZP_04958376.1| porphobilinogen deaminase [gamma proteobacterium NOR51-B] gi|219679611|gb|EED35960.1| porphobilinogen deaminase [gamma proteobacterium NOR51-B] Length = 303 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 109/306 (35%), Positives = 160/306 (52%), Gaps = 9/306 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I TR SPLAL A L ++H P + ++ ++++GD++ +R L ++GG Sbjct: 1 MSK--IVIATRESPLALWQANHVADRLSELH--PELEVELLGMTSRGDQLLDRPLYKVGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L G D AVHS KD+P L GL + RED D + + Sbjct: 57 KGLFVKELETALQDGSADIAVHSMKDVPMALPPGLTLGVICEREDPTDSLVGVSG--FDQ 114 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR + LLR R D+ + RG + TRL KL+ + +AI+LA AG+KRL Sbjct: 115 LPQGARVGTSSLRRGSQLLRHRPDLEIGFLRGNVNTRLAKLDAGEFNAIILASAGLKRLG 174 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++ + P+ GQGA+ IE + + EL+K ++H T V ERA + L Sbjct: 175 FEDRIGQLIDPDLSLPAGGQGAVGIEYRDGDDRIAELLKPLHHVQTAACVLAERALVRRL 234 Query: 241 DGSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DG C IA FA G L+ G V +++GK G D +G D A + Sbjct: 235 DGGCDVPIASFALPDGDGGLWLRGRVGSTEGKTLLLAEGRG--RDPEVLGYDVADQLLQA 292 Query: 300 SNKNVF 305 + Sbjct: 293 GAAELL 298 >gi|289664026|ref|ZP_06485607.1| porphobilinogen deaminase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 304 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 112/301 (37%), Positives = 167/301 (55%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 3 TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ SL+ L L Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYASLQALPLG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL + Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLDAR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC Sbjct: 181 ISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 +A FA +G L+ G+V ++ +G+ D +GR AQ + + Sbjct: 241 HVPVAAFARWEGEGLFLQGMVGSASDGRLIHADAHGSADDTEALGRRVAQGLFDKGAAQL 300 Query: 305 F 305 Sbjct: 301 L 301 >gi|66773161|ref|NP_001019559.1| hydroxymethylbilane synthase, b [Danio rerio] gi|63101908|gb|AAH95373.1| Hydroxymethylbilane synthase, b [Danio rerio] Length = 360 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 114/338 (33%), Positives = 158/338 (46%), Gaps = 37/338 (10%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LA L +++ P I+ +ST GD+I + L++IG K Sbjct: 15 SRVIRVGTRKSQLARIQTDSVVEKLKELY--PDVLFEIVAMSTTGDKILDTALSKIGEKS 72 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLK 119 LFT+E+E L E+D VHS KD+PT L G I A L RE+ D + H + L Sbjct: 73 LFTKELENALEKNEVDLVVHSLKDLPTVLPAGFTIGAVLKRENPHDAVVLHPKNKGKRLD 132 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKR 178 L+ SVIGTSSLRR A L + + D RG + TRL KL+ NN AI+LA AG+KR Sbjct: 133 SLSNKSVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDENNDFSAIILAAAGLKR 192 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E I +IL ED + GQGA+ +E + E+V V+N DT S ERAFL Sbjct: 193 MGWENRISQILGPEDCMYAVGQGALAVEVRARDLDILEMVSVLNDSDTALSCIAERAFLK 252 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS--------------------- 277 L+G C +A + K S LY G V + DG + + Sbjct: 253 HLEGGCSVPVAVHSEVKNSQLYLTGAVYSLDGSDSLKETMQTSFNPDTQAEEQEKVDEKV 312 Query: 278 ----------RNGNRCDAINIGRDAAQYIRFISNKNVF 305 + A+ +G D + K + Sbjct: 313 QRVGITALKVAEAAQDAAMKLGVDLGNLLLSKGAKEIL 350 >gi|330684284|gb|EGG96022.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU121] Length = 298 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 101/300 (33%), Positives = 168/300 (56%), Gaps = 6/300 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L V P +I I + TKGDRI ++ L+++GGKGL Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDKLKQVR--PELDIEIKEIVTKGDRIVDKQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L +ID A+HS KD+P+ + +GL + RE D +IS L++L Sbjct: 60 FVKEIQNELFEKQIDMAIHSLKDVPSVIPEGLTLGCIPDREVPFDAYISKNHTPLRELPE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 S+IGTSSLRR A +L + + RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GSIIGTSSLRRGAQILSKYPHLEIKWIRGNIDTRLQKLETEDYDAIILAAAGLRRMGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ L+ + P+ GQGA+ IE ++ + +L++ ++++D V ER FLAE+DG Sbjct: 180 DIVTTYLDKDVLLPAIGQGALGIECRSDDKELLDLLQEVHNKDVEKCVTAERTFLAEMDG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ I G+A + F G+++ DG +E + G +G++ ++ ++ Sbjct: 240 SCQVPIGGYATINSQQQIEFTGLIMTPDGTERYEHTAIG--ESPTELGKEVSRVLKEQGA 297 >gi|92116183|ref|YP_575912.1| porphobilinogen deaminase [Nitrobacter hamburgensis X14] gi|123387219|sp|Q1QQP5|HEM3_NITHX RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|91799077|gb|ABE61452.1| porphobilinogen deaminase [Nitrobacter hamburgensis X14] Length = 316 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 137/299 (45%), Positives = 190/299 (63%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 IGTR S LALA A E R L H++ P IVI + T GD I +R L ++GGKGLFT+ Sbjct: 12 TIGTRGSALALAQANEVRDRLARAHQVAPERIVIKTIRTSGDAIQDRPLFDVGGKGLFTK 71 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE+ L++G ID AVHS+KD+PT L + A+LPRED+RD FIS A SL DL S+ Sbjct: 72 EIEEALLAGSIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDAFISPRAASLNDLPAGSI 131 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GT+SLRR+A++LR R D+ V RG +ETRL KL +A A LLA AG+ RL + Sbjct: 132 VGTASLRRQAMVLRLRPDLKVSVIRGNVETRLRKLVAGEADATLLALAGLNRLGLQDRAT 191 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 IL ++F P+ GQGAI IE+ ++ + VK I +T +++ ER+FLA LDGSC++ Sbjct: 192 RILETDEFLPAVGQGAIAIESRRDDDRINAFVKAIGDSETEVALSAERSFLALLDGSCRT 251 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 I G G ++F G++++ DG +E +R G R DA +G DAA+ +R + + F Sbjct: 252 PIGGHCRVNGDRIHFRGLIISPDGTQSYETTREGARADAAALGADAARELRERAGEKFF 310 >gi|288957245|ref|YP_003447586.1| hydroxymethylbilane synthase [Azospirillum sp. B510] gi|288909553|dbj|BAI71042.1| hydroxymethylbilane synthase [Azospirillum sp. B510] Length = 312 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 134/307 (43%), Positives = 175/307 (57%), Gaps = 2/307 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEI 58 M P RIGTR SPLALA A ETR L+ H P I I+ T GDRI +RTL E Sbjct: 1 MTTHPLRIGTRGSPLALAQAHETRDRLIAAHPHLAAPGAIEIVVFKTTGDRILDRTLAEA 60 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLFT+E+E+ L G D AVHS KD+PT+L GL+I+ LPRED RD F S + L Sbjct: 61 GGKGLFTKELEEALFDGRADLAVHSMKDVPTQLPDGLEIATLLPREDPRDAFFSRSGGGL 120 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 DL +V+GT+ LRR+A +L R D+ + RG ++TRL+KL+ + A LLA AG++R Sbjct: 121 ADLPAGAVVGTAGLRRQAQVLELRPDLRIFPLRGNVQTRLSKLDAGEVDATLLALAGLRR 180 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L I +L E P+ QGAI IE + + L+ +N +T V ERA LA Sbjct: 181 LGLTGRISAVLEPETMLPAVAQGAIGIEIRSADDATRALLAPLNCAETMVRVTAERALLA 240 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 LDGSC++ IA A G L+ VL+ DG+ R G +A ++G DA IR Sbjct: 241 ALDGSCRTPIAALALLDGDALHLRAKVLSCDGRSIFRAERRGKAANAESLGADAGAEIRA 300 Query: 299 ISNKNVF 305 + F Sbjct: 301 QLPPDFF 307 >gi|84625435|ref|YP_452807.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188575118|ref|YP_001912047.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae PXO99A] gi|123752694|sp|Q2NYU4|HEM3_XANOM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238059004|sp|B2SMV3|HEM3_XANOP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|84369375|dbj|BAE70533.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188519570|gb|ACD57515.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 304 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 110/301 (36%), Positives = 168/301 (55%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 3 TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ G+ DCAVHS KD+P +L + A L R D D +S+ SL+ L L Sbjct: 61 LKELELAMLRGDADCAVHSFKDVPMELDDPFVLPAILERGDPADALVSNLYASLQALPLG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL ++ Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLDER 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC Sbjct: 181 ISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 +A A +G L+ G+V ++ +G+ D ++GR AQ + + Sbjct: 241 HVPVAALARWEGEGLFLQGMVGSASDGRLIHADAHGSADDTEDLGRRVAQGLFDKGAAQL 300 Query: 305 F 305 Sbjct: 301 L 301 >gi|70726258|ref|YP_253172.1| porphobilinogen deaminase [Staphylococcus haemolyticus JCSC1435] gi|123748643|sp|Q4L709|HEM3_STAHJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|68446982|dbj|BAE04566.1| porphobilinogen deaminase [Staphylococcus haemolyticus JCSC1435] Length = 310 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 101/304 (33%), Positives = 169/304 (55%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L V P I I + TKGDRI N+ L+++GGKGL Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDKLKAV--DPTLEIEIKEIVTKGDRIVNKQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+++L EID A+HS KD+P+ + +GL + RE D +IS L +L Sbjct: 60 FVKEIQQELFDKEIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHIPLNELPD 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLKKLEIEDYDAIILAAAGLRRMGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ L+ + P+ GQGA+ IE ++ + EL+ ++++ + V ER FL+ +DG Sbjct: 180 DIVTTYLDKDILLPAIGQGALGIECRSDDVELLELLSKVHNQAVANCVTAERTFLSAMDG 239 Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ I G+A + + F G+++ DG +E + G + +++G ++ ++ Sbjct: 240 SCQVPIGGYATNKENGEIEFTGLIMTPDGTKRYEHTEVGK--NPVDLGEAVSRVLKEQGA 297 Query: 302 KNVF 305 + Sbjct: 298 YEII 301 >gi|224419071|ref|ZP_03657077.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491] gi|253828009|ref|ZP_04870894.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491] gi|313142581|ref|ZP_07804774.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491] gi|253511415|gb|EES90074.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491] gi|313131612|gb|EFR49229.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491] Length = 314 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 105/309 (33%), Positives = 162/309 (52%), Gaps = 8/309 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+K IGTR S LAL A + SL + P + + + TKGD+I + L +IGG Sbjct: 1 MQK--IIIGTRGSVLALWQANFVKDSLEK--QYPNLQVELKIVKTKGDKILDVPLAKIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ ++ GEID AVHS KD+P + ++GL ++A RED+RD F+S ++L++ Sbjct: 57 KGLFTKELEELMLKGEIDVAVHSLKDVPVEFVEGLGLAAITKREDVRDSFLSFKYKNLQE 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRR + R D+ + RG ++TRL +L AI+LA AG+ RL Sbjct: 117 LPQGAKVGTTSLRRVMQINTLRKDLDCMSLRGNVQTRLKRLKEGDFDAIILAQAGVNRLG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E + I ++ P+ GQ A+ IE V + + +L++ +N + ER F+ L Sbjct: 177 IEGEVDCIAPLDFMIPAMGQAALGIECRV-DSEVAKLLEFLNDTKASFETSAEREFVKTL 235 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFH---EVSRNGNRCDAINIGRDAAQYIR 297 +G C+ I A + L I+ DG +V + D GRD A Sbjct: 236 EGGCQVPIGINATLEKDNLTIRAILGIPDGSRILKDAKVCAVSSLEDCKKAGRDFALEFI 295 Query: 298 FISNKNVFN 306 K + Sbjct: 296 KKGAKEILQ 304 >gi|209147746|gb|ACI32904.1| Porphobilinogen deaminase [Salmo salar] Length = 359 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 107/285 (37%), Positives = 147/285 (51%), Gaps = 6/285 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIGTR S LA L ++ P +I I+ ++T GD+I + L++IG K Sbjct: 16 SRVIRIGTRNSQLARIQTDSVAEKLKGLY--PDVHIEIVGMTTTGDKILDTALSKIGEKS 73 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119 LFT+E+E L E+D VHS KD+PT L G I A L RE+ D + H +SL Sbjct: 74 LFTKELETALERNEVDLVVHSLKDLPTTLPPGFTIGAVLKRENPHDAVVLHPQNMGKSLD 133 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKR 178 L SVIGTSSLRR A L + + D RG + TRL KL+ AI+LA AG++R Sbjct: 134 TLPDKSVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDEKGDFSAIILAAAGLRR 193 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E + +IL ED + GQGAI IE + E+V V++ +T ERAFL Sbjct: 194 MGWESRVSQILGPEDCMYAVGQGAIAIEVRAKDKDILEMVSVLHDPNTVLRCIAERAFLR 253 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283 L+G C +A K S LY G V + DG + + + Sbjct: 254 RLEGGCSVPVAVHTEVKDSQLYLTGAVYSLDGSDSLKETMQTSIA 298 >gi|78046235|ref|YP_362410.1| porphobilinogen deaminase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123771497|sp|Q3BXV3|HEM3_XANC5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78034665|emb|CAJ22310.1| hydroxymethylbilane synthase HemC [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 304 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 113/301 (37%), Positives = 167/301 (55%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 3 TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEMLDRSLAAIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ SL+ L L Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYASLQALPLG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEAR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC Sbjct: 181 ISARLDAPEWLPAPAQGAVAVECRGDDARIYSLLAVLDAGRTRACVEAERAMNRALHGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 +A FA +G L+ G+V ++ +G+ D +GR AQ + + Sbjct: 241 HVPVAAFARWEGQGLFLQGMVGSASDGRLIHADAHGSAEDTEALGRRVAQGLFDKGAAQL 300 Query: 305 F 305 Sbjct: 301 L 301 >gi|163856376|ref|YP_001630674.1| porphobilinogen deaminase [Bordetella petrii DSM 12804] gi|229836105|sp|A9IKF3|HEM3_BORPD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|163260104|emb|CAP42405.1| hemC [Bordetella petrii] Length = 313 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 109/300 (36%), Positives = 163/300 (54%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A R L ++ P + ++ L+T+GD+I +RTL+++GGKGLF Sbjct: 7 LVIATRASRLALWQAEHVRDRLRALY--PACAVELLTLTTRGDQILDRTLSKVGGKGLFV 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P L ++ A L R D RD F+S+ +L DL + Sbjct: 65 KELETALLDGRADLAVHSLKDVPVDLQAPFELCAILERADPRDAFVSNQYTTLADLPAGA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR++ + + +SV RG ++TRL+KL+ AI+LA AG++RL + I Sbjct: 125 VVGTSSLRRESQIRQRYPHLSVKPLRGNLDTRLSKLDRGDYAAIVLAAAGLQRLGMGERI 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + +L ED P+ GQGA+ IE + +E + + T V ERA L GSC+ Sbjct: 185 RSLLEPEDSLPAAGQGALGIEIRNDRNDLREWLAPLACSRTTACVVAERAVSRALGGSCQ 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A +A G++L +V + DG G A IG+ AAQ + + Sbjct: 245 VPLAAYAELNGNSLALRALVASPDGTRVIRSQHAGPAEQAQAIGQAAAQELLSNGADAIL 304 >gi|166710503|ref|ZP_02241710.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 304 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 111/301 (36%), Positives = 168/301 (55%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 3 TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ G+ DCAVHS KD+P +L + A L R D D +S+ SL+ L L Sbjct: 61 LKELELAVLRGDADCAVHSLKDVPMELDDPFVLPAILERGDPADALVSNLYASLQALPLG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL + Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLDAR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC Sbjct: 181 ISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 +A FA +G L+ G+V ++ +G+ D ++GR AQ + + Sbjct: 241 HVPVAAFARWEGEGLFLQGMVGSASDGRLIHADAHGSADDTEDLGRRVAQGLFDKGAAQL 300 Query: 305 F 305 Sbjct: 301 L 301 >gi|298707417|emb|CBJ30046.1| hydroxymethylbilane synthase, putative chloroplast precursor [Ectocarpus siliculosus] Length = 373 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 127/299 (42%), Positives = 188/299 (62%), Gaps = 2/299 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 IGTR SPLALA A+ETR L + + I + T GD I ++ LTEIGGKGL Sbjct: 59 LTIGTRGSPLALAQAYETRKRLGEQFDELKEEGAVAIQVIKTSGDMILDKPLTEIGGKGL 118 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E++ +L++ ++D VHS KD+PT ++ G + LPRED D FIS+ A ++ L Sbjct: 119 FTKELDVQLLNKDVDICVHSMKDVPTWIVPGTILPCNLPREDTSDAFISNKADNIASLPD 178 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SVIG++SLRR+A LLR V++FRG ++TRL KL+ A LLA+AG+KRL+ + Sbjct: 179 GSVIGSASLRRQAQLLRANPTFKVVNFRGNVQTRLRKLDEEIVDATLLAFAGLKRLEMAQ 238 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V +L+ + P+ QGAI I+ N+P ++ + + H++T +V+CERAFLA LDG+ Sbjct: 239 VATSVLDQDAMLPAVAQGAIGIQCRENDPTFEKYLAGLCHQETKTAVDCERAFLAALDGN 298 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 CK+ IAG A +G L F G++ + DGK F++ +R G DA+ +G DA ++ + Sbjct: 299 CKTPIAGQARMEGEKLVFRGLIASPDGKQFYDTTREGKPEDAVAMGHDAGMELKKRAGP 357 >gi|242060650|ref|XP_002451614.1| hypothetical protein SORBIDRAFT_04g004640 [Sorghum bicolor] gi|241931445|gb|EES04590.1| hypothetical protein SORBIDRAFT_04g004640 [Sorghum bicolor] Length = 340 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 122/299 (40%), Positives = 176/299 (58%), Gaps = 5/299 (1%) Query: 13 SPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEK 70 S LALA A ETR L H + II + T GD I ++ L +IGGKGLFT+EI+ Sbjct: 41 SDLALAQARETRDKLKAAHSELAEEGAVEIIIIKTTGDMILDKPLADIGGKGLFTKEIDD 100 Query: 71 KLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTS 130 ++ G ID AVHS KD+PT L +G + LPRED RD FI TA SL +L V+G++ Sbjct: 101 AILQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDARDAFICLTANSLAELPSGCVVGSA 160 Query: 131 SLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILN 190 SLRR++ +L + V++ RG ++TRL KL N HA LLA AG+KRL + + IL+ Sbjct: 161 SLRRQSQILCRYPSLKVVNLRGNVQTRLTKLKNGDVHATLLALAGLKRLNMVENVTSILS 220 Query: 191 IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250 +E+ P+ QGAI I N+ K E + +NHEDT +V CER FL LDG+C++ IA Sbjct: 221 MEEMLPAVAQGAIGIACRSNDNKMMEYLSSLNHEDTRSAVACEREFLTVLDGNCRTPIAA 280 Query: 251 FAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFISNKNVFN 306 +A+ + F G++ + DG +E +R G D + +G+DA ++ + ++ Sbjct: 281 YAHRDKDGSCSFRGLLASPDGSKVYETTRIGPYSFDDMVEMGKDAGHELKAKAGPGFYD 339 >gi|75674669|ref|YP_317090.1| porphobilinogen deaminase [Nitrobacter winogradskyi Nb-255] gi|123745784|sp|Q3SVF3|HEM3_NITWN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|74419539|gb|ABA03738.1| porphobilinogen deaminase [Nitrobacter winogradskyi Nb-255] Length = 316 Score = 342 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 136/299 (45%), Positives = 190/299 (63%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 IGTR SPLALA A E R L H++ P I I + T GD I +R L ++GGKGLFT+ Sbjct: 12 TIGTRGSPLALAQAHEVRDRLARAHQVAPERIAIKTIRTSGDAIQDRPLFDVGGKGLFTK 71 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE+ L++G ID AVHS+KD+PT L + A+LPRED+RDVFIS A SL DL + Sbjct: 72 EIEEALLAGTIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDVFISPHAGSLNDLPAGAT 131 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GT+SLRR+A++L+ R D+ V RG +ETRL K++ +A A LLA AG+ RL + Sbjct: 132 VGTASLRRQAMVLKLRPDLKVNSLRGNVETRLRKISVGEADATLLALAGLNRLGLQDKAT 191 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 IL ++F P+ GQGAI IE+ ++ + VK I +T +++ ER+FLA LDGSC++ Sbjct: 192 RILETDEFLPAVGQGAIAIESRRDDDRINAFVKAIGDPETEVALSAERSFLALLDGSCRT 251 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 I G G + F G++++ DG F+E +R G R DA +G DAA +R + + F Sbjct: 252 PIGGHCRVNGDRIDFRGLIISPDGTEFYETTREGARADAAALGADAAHELRERAGEKFF 310 >gi|148222555|ref|NP_001089699.1| hydroxymethylbilane synthase [Xenopus laevis] gi|76780331|gb|AAI06358.1| MGC130905 protein [Xenopus laevis] Length = 351 Score = 342 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 148/337 (43%), Gaps = 35/337 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K R+GTR S LA L + + I+ +ST GD+I + L++IG K Sbjct: 7 TKHVIRVGTRKSQLARIQTDSVVEMLSK--RFSSTHFEIVAMSTTGDKILDTALSKIGEK 64 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H +L Sbjct: 65 SLFTKELENALEKNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPYDAVVFHPKRFGNTL 124 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIK 177 L SVIGTSSLRR A L + + D RG + TRL KL+ + AI+LA AG++ Sbjct: 125 STLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRLRKLDEQEDFSAIILAAAGLR 184 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ E I +IL ++ + GQGA+ +E + +V + +T ERAF+ Sbjct: 185 RMGWENRIGQILTSDECLYAVGQGALAVEVRAKDQDILSMVSALQDPETVLRCVAERAFM 244 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV-----------SRNGNRCD-- 284 +L+G C +A K S LY G V + DG + G D Sbjct: 245 KKLEGGCSVPVAVSTVVKDSQLYLTGAVYSLDGSDSLKETMQSCINFPQQEVEGPNDDVQ 304 Query: 285 ----------------AINIGRDAAQYIRFISNKNVF 305 A +G A + K + Sbjct: 305 HVGITALGVSHQALESAECLGTGLADLLLSKGAKEIL 341 >gi|194290490|ref|YP_002006397.1| porphobilinogen deaminase [Cupriavidus taiwanensis LMG 19424] gi|193224325|emb|CAQ70336.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Cupriavidus taiwanensis LMG 19424] Length = 336 Score = 342 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 163/305 (53%), Gaps = 5/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + I +R S LAL A R++L + P ++ I+ ++T+GD+I +RTL+++GGKGL Sbjct: 19 QKLVIASRESRLALWQAEHVRAALQQYY--PACDVSILGMTTRGDQILDRTLSKVGGKGL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E + G D AVHS KD+P +L G ++A + RED RD +S SL ++ Sbjct: 77 FVKELEFAMDEGRADLAVHSLKDVPMELPPGFTLAAVMEREDPRDALVSSAYASLDEMPP 136 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR+A L + V RG ++TRL KL+ + AI+LA AG+KRL Sbjct: 137 GTVVGTSSLRREAALRSRYPHLVVKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGD 196 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ ++ +E P+ GQGA+ IET P+ E + +NH+ T +V ERA L GS Sbjct: 197 RIRALIPLEASLPAAGQGALGIETLSTRPELAEWLAPLNHQPTALAVTAERAVSRRLGGS 256 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKI---FHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C+ +A A G L V DG + A +G+ A + Sbjct: 257 CQVPLAAHARWDGDQLRLEAFVALPDGSRAIRAAAAGPAADLAAAEALGQACAGDLLAQG 316 Query: 301 NKNVF 305 +++ Sbjct: 317 AESIL 321 >gi|188584576|ref|YP_001928021.1| porphobilinogen deaminase [Methylobacterium populi BJ001] gi|179348074|gb|ACB83486.1| porphobilinogen deaminase [Methylobacterium populi BJ001] Length = 309 Score = 342 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 121/304 (39%), Positives = 171/304 (56%), Gaps = 3/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +P RIGTR SP+ALA R ++ + P I+ +ST DR+ +R L+EIGGKG Sbjct: 4 SRPLRIGTRGSPMALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIGGKG 61 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH-TAQSLKDL 121 LFT+E+E+ L + ID AVHS KD+ T L GL I+ L R+D RD F+S TA L DL Sbjct: 62 LFTKELEQALFADTIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSAGTANGLADL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSSLRR A +L R D+ ++ RG TR+ KL + A LLA AG++RL Sbjct: 122 PSGARVGTSSLRRGAQVLMHRPDLMIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGM 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E V + +L +E+ P+ QGA+ IE + + L+ + T +++ ER LAELD Sbjct: 182 EDVARSVLPVEEMLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELD 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC++ IA A G + G++ DG V R G +A IGRDA ++ + Sbjct: 242 GSCRTPIAALAQVNGDRIALDGLLFLPDGSRHWAVHREGPAAEADAIGRDAGAELKRSAG 301 Query: 302 KNVF 305 F Sbjct: 302 DVYF 305 >gi|56856|emb|CAA29984.1| unnamed protein product [Rattus norvegicus] Length = 344 Score = 342 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 155/337 (45%), Gaps = 35/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + L ++ P II +ST GD+I + L++IG K L Sbjct: 2 RVIRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKSL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + ++L+ Sbjct: 60 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFEGKFIGKTLET 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179 L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 120 LPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDEQLEFSAIILAVAGLQRM 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ER FL Sbjct: 180 GWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERDFLRH 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 240 LEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLV 299 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 300 GITARNIPRGAQLAAENLGISLASLLLNKGAKNILDV 336 >gi|164687765|ref|ZP_02211793.1| hypothetical protein CLOBAR_01407 [Clostridium bartlettii DSM 16795] gi|164603539|gb|EDQ97004.1| hypothetical protein CLOBAR_01407 [Clostridium bartlettii DSM 16795] Length = 298 Score = 342 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 100/295 (33%), Positives = 153/295 (51%), Gaps = 3/295 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +GTR S LAL L + P + + TKGD I + L +IG KGLF Sbjct: 2 KLVVGTRGSNLALVQTNWVVDQLKK--ENPGVEFEVKIIKTKGDLIKDLPLDKIGDKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLAL 123 +EIEK L+ GEID AVHS KDMP+ L +GL+ + RED RD I +SL DL Sbjct: 60 VKEIEKSLLDGEIDMAVHSMKDMPSYLPEGLKFAHSPKREDPRDALIFKEGYKSLDDLPQ 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGT S RRK LL+ R D+ ++ RG IETR+ K+ K ++LA +G++R + Sbjct: 120 GARIGTGSKRRKYQLLKHRPDLEIVPIRGNIETRIKKIETEKLDGVVLAASGLRRAGLDD 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + P+P QG + +E ++ + ++++ I + T ++ ER FL ++GS Sbjct: 180 KIDYYIPTDIMLPAPAQGILALEIREDDKETEKIIDSIKDDITKIQIDAERGFLIGVNGS 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C + + +G + G+ +GK S+ G DA IG + A+ + Sbjct: 240 CHIPMGAYCEIEGEKITLTGLYGDGEGKKIVVQSQVGTLADAPKIGYELAKSVLK 294 >gi|119897284|ref|YP_932497.1| porphobilinogen deaminase [Azoarcus sp. BH72] gi|119669697|emb|CAL93610.1| hydroxymethylbilane synthase [Azoarcus sp. BH72] Length = 316 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 102/300 (34%), Positives = 156/300 (52%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A ++ L ++ P + ++ ++T+GD+I +R L ++GGKGLF Sbjct: 15 IVIATRESRLALWQAEHVKARLEALY--PACTVELLGMTTRGDQILDRPLAKVGGKGLFV 72 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P ++ K + RE D F+S+ SL D+ + Sbjct: 73 KELETALLDGRADIAVHSMKDVPMEMGKAFALPCISAREVPLDAFVSNRYASLADMPPGT 132 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR++ L ++V RG ++TRL KL+ + AI+LA AG+ RL I Sbjct: 133 VVGTSSLRRESQLHAQYPFLAVTSLRGNLDTRLRKLDEGQYDAIILAAAGLTRLGLADRI 192 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE + P+ + +N T V ERA L GSC+ Sbjct: 193 RATLPAEVSLPAAGQGALGIECLSSRPEVAAWLAPLNDPATSACVRAERAVARALAGSCE 252 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + +A +G+ L+ G V DG R G+ A +G A +R + + Sbjct: 253 VPLGAYAELRGARLWLRGFVARPDGSEIVRAEREGDPAAAEALGGALADDLRAQGAERIL 312 >gi|228475193|ref|ZP_04059919.1| hydroxymethylbilane synthase [Staphylococcus hominis SK119] gi|228270804|gb|EEK12206.1| hydroxymethylbilane synthase [Staphylococcus hominis SK119] Length = 310 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 173/304 (56%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L + P I I + TKGDRI N+ L+++GGKGL Sbjct: 2 RKLVVGSRRSKLALTQSKQFIDKLKAI--DPSLEIEIKEIVTKGDRIVNQQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L + +ID A+HS KD+P+ + +GL + RE D +I+ L++L Sbjct: 60 FVKEIQNELFNNDIDMAIHSLKDVPSIIPEGLTLGCIPDREIPFDAYIAKNHVPLEELPK 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +S++GTSSLRR A +L + + RG I+TRLNKL AI+LA AG+KR+ + Sbjct: 120 NSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLNKLETEDYDAIILAAAGLKRMGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ L+ + P+ GQGA+ IE N+ + EL++ +++ + + V ER FLA +DG Sbjct: 180 DVVTTYLDKDTLLPAIGQGALGIECRSNDIELLELLQKVHNNEVANCVTAERTFLASMDG 239 Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ I G+A Y + + F G+++ DGK +E + G D + +G ++ ++ Sbjct: 240 SCQVPIGGYANYNNNNEIEFTGLIMTPDGKERYEHTEVGT--DPVKLGNRVSEILKEQGA 297 Query: 302 KNVF 305 + Sbjct: 298 YEII 301 >gi|188990080|ref|YP_001902090.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris str. B100] gi|229846307|sp|B0RNI9|HEM3_XANCB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|167731840|emb|CAP50024.1| hydroxymethylbilane synthase [Xanthomonas campestris pv. campestris] Length = 304 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 110/301 (36%), Positives = 167/301 (55%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 3 TLRIATRKSPLALWQSEHVATALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ +L+ L L Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYATLQALPLG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEAR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L+ ++ P+P QGA+ +E ++ + +L+ V++ T V ERA L GSC Sbjct: 181 ITARLDAPEWLPAPAQGAVAVECRGDDARIHDLLAVLDAGRTRACVEAERAMNRALHGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 +A FA +G L+ G+V ++ +G+ ++GR A + + Sbjct: 241 HVPVAAFARWEGEDLFLQGMVGSASDGRLIHAEAHGSPDATEDLGRRVADGLFEKGAAQL 300 Query: 305 F 305 Sbjct: 301 L 301 >gi|73662403|ref|YP_301184.1| porphobilinogen deaminase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123761533|sp|Q49YA2|HEM3_STAS1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|72494918|dbj|BAE18239.1| porphobilinogen deaminase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 308 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 100/304 (32%), Positives = 167/304 (54%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L + P I I + TKGD I ++ L+++GGKGL Sbjct: 2 RKLVVGSRRSKLALTQSRQFIDKLKAI--DPSLEIEIKEIVTKGDLIVDKQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L + ID A+HS KD+P+ + GL + RE+ D +I+ L +L Sbjct: 60 FVKEIQNELFNHGIDMAIHSLKDVPSVIPDGLTLGCIPDRENPYDAYIAKNHVPLNELPD 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +S++GTSSLRR A +L + + RG I+TRLNKL AI+LA AG+KR+ + Sbjct: 120 NSIVGTSSLRRGAQILAKYPKLQIKWIRGNIDTRLNKLETEDYDAIILAAAGLKRMGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ L+ E P+ GQGA+ IE ++ L+ ++++D D V ER FL ++G Sbjct: 180 DIVTSYLDKETLIPAIGQGALGIECRSDDETLLSLLSKVHNQDVADCVTAERTFLTRMNG 239 Query: 243 SCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ I G+A + T+ F G++++ DGK ++ + G D + +G + + + Sbjct: 240 SCQVPIGGYATKEADGTIEFTGLIMSPDGKERYQHTVRGT--DPVALGEEVTKVLNEQGA 297 Query: 302 KNVF 305 + Sbjct: 298 YEII 301 >gi|329119508|ref|ZP_08248193.1| hydroxymethylbilane synthase [Neisseria bacilliformis ATCC BAA-1200] gi|327464441|gb|EGF10741.1| hydroxymethylbilane synthase [Neisseria bacilliformis ATCC BAA-1200] Length = 317 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 105/302 (34%), Positives = 165/302 (54%), Gaps = 2/302 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A ++ L ++ P +I I+ L+T+GD+I +RTL++IGGKGLF Sbjct: 6 KLTIASRQSALAMWQAEHIKARLHALY--PACDIRILGLTTRGDQILDRTLSKIGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E+ L G D AVHS KD+P +L +G ++A R D F+S+ +L L Sbjct: 64 IKELEQALHDGRADLAVHSIKDVPMELPEGFLLAAIGERASPFDAFVSNRHNTLAALPAG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A + ++V RG ++TRL KL+N + AI+LA AG++RL Sbjct: 124 AVVGTSSLRREAQIRARHPHLTVKPLRGNVQTRLAKLDNGEYDAIILAAAGLQRLGLNGR 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+EIL+ ++ P+ GQGA+ IE + L+ +NH +T V ER L GSC Sbjct: 184 IREILSPDECLPAAGQGALGIEIAEHRSDLLPLLAPLNHAETAACVTAERTLAQALGGSC 243 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A + L G+V DG + E + A +GR A+ + + + Sbjct: 244 QIPLAAYCTSDEGLLTLRGLVGHPDGSVLIEAAAQAPAAYARTLGRAVAKRLADQDAEAL 303 Query: 305 FN 306 + Sbjct: 304 ID 305 >gi|295695321|ref|YP_003588559.1| porphobilinogen deaminase [Bacillus tusciae DSM 2912] gi|295410923|gb|ADG05415.1| porphobilinogen deaminase [Bacillus tusciae DSM 2912] Length = 310 Score = 342 bits (877), Expect = 5e-92, Method: Composition-based stats. Identities = 102/302 (33%), Positives = 153/302 (50%), Gaps = 4/302 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIG+R S LA+ ++P + ++P++T+GDR+ + L+ +GGKGLF Sbjct: 3 ILRIGSRKSALAMTQTRWLIEQWQK--RVPGLSAEVVPMTTRGDRVLDVPLSRVGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 EEIE+ L+ ID AVHS KD+P +L G + A RED RD I+ + DL Sbjct: 61 VEEIERALLEKRIDAAVHSLKDLPAQLAPGTVVGAVPRREDPRDAVITRDGRPFDDLPSG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR A L R+R D++ I RG ++TRL KL + A++LA AGI RL Sbjct: 121 ARVGTSSLRRVAQLRRYRPDLAFIPLRGNVDTRLRKLAAGEVDAVVLAAAGILRLGLGDR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ E P+ GQGA+ ++ + + ++ + +V ER LA L+G C Sbjct: 181 ITEYLSPEICLPAVGQGALAVQCREADEDTRRSLESVEDAAARKTVEAERTCLAALEGGC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A + + +V DG V G D +GR AA + + + Sbjct: 241 QVPIGALAEIRDGHIRLAAMVARPDGSELLRVVVQG--EDPAEVGRRAAADLLELGAGKL 298 Query: 305 FN 306 Sbjct: 299 LQ 300 >gi|299533189|ref|ZP_07046573.1| porphobilinogen deaminase [Comamonas testosteroni S44] gi|298718719|gb|EFI59692.1| porphobilinogen deaminase [Comamonas testosteroni S44] Length = 314 Score = 342 bits (877), Expect = 5e-92, Method: Composition-based stats. Identities = 102/300 (34%), Positives = 159/300 (53%), Gaps = 8/300 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LA+ A ++ L H++ ++ ++TKGD+I +R L+++GGKGLF Sbjct: 11 IVIATRESQLAMWQAEHVQAILRGR----GHSVDLLGMTTKGDQILDRALSKVGGKGLFV 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P +L +G ++ + RED RD F+S+ SL +L + Sbjct: 67 KELEVALEEGRADLAVHSLKDVPMELPEGFVLACVMTREDPRDAFVSNRYASLDELPQGA 126 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ALL R D+ + RG + TRL KL+ + AI+LA AG+ RL+ + I Sbjct: 127 VVGTSSLRRQALLQALRPDLKIEALRGNVNTRLRKLDEGQYDAIVLAAAGLMRLEMSERI 186 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + P+ GQGA+ IE + + + + H TW +V ERA + GSC Sbjct: 187 RAKFDPAQMLPAAGQGALGIEVRADRQDIIDALAPLAHMPTWLTVTAERAVSRCMGGSCS 246 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNRCD---AINIGRDAAQYIRFISN 301 +A + +G TL+ +G V + + D A +G A ++ Sbjct: 247 MPLAAYGRFEGDTLHMDAAWGDMEGSKGLVRVQASASVTDFASANALGEQLATQLQAAGA 306 >gi|326317960|ref|YP_004235632.1| porphobilinogen deaminase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374796|gb|ADX47065.1| porphobilinogen deaminase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 318 Score = 341 bits (876), Expect = 6e-92, Method: Composition-based stats. Identities = 106/303 (34%), Positives = 157/303 (51%), Gaps = 9/303 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P I TR S LAL A ++ L H + ++ ++TKGD+I +RTL+++GGKGLF Sbjct: 17 PIVIATRESRLALWQAEHVQALLRAR----GHAVELLGMTTKGDQILDRTLSKVGGKGLF 72 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G AVHS KD+P +L +G +++ + RED RD F+S L DL Sbjct: 73 VKELEVALEEGRAHVAVHSLKDVPMELPEGFELACVMEREDPRDAFVSPRHACLADLPQG 132 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL E Sbjct: 133 AVVGTSSLRRQVLLQALRPDLDIQPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGMEDR 192 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + ++ P+ GQGA+ +E + V + H+ TW V ERA L GSC Sbjct: 193 IRALFEPDEMLPAAGQGALGLEVRSERHDLLQAVAPLAHQATWLCVAAERAVSRALGGSC 252 Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDG-KIFHEVSRNGNRC---DAINIGRDAAQYIRFI 299 +A TL G +G + V + +A +G A +R Sbjct: 253 SVPLAAHGRWTDAGTLRLDGAWGDPEGIRPLVRVQVSAPVASLPEAEALGSAVAARLRAD 312 Query: 300 SNK 302 + Sbjct: 313 GAQ 315 >gi|254440462|ref|ZP_05053956.1| porphobilinogen deaminase [Octadecabacter antarcticus 307] gi|198255908|gb|EDY80222.1| porphobilinogen deaminase [Octadecabacter antarcticus 307] Length = 321 Score = 341 bits (876), Expect = 6e-92, Method: Composition-based stats. Identities = 117/305 (38%), Positives = 174/305 (57%), Gaps = 4/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A ETR+ LM + + + T GD + L IG Sbjct: 11 PLKIGTRGSPLALAQAHETRARLMVAFDLAEAAFEVCVIKTTGDDRSLIDADIPLKVIGN 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ +++G+ID AVHS KDMP GL + +LPRED RD F+S + D Sbjct: 71 KGLFTKEIEEAMLAGQIDIAVHSTKDMPVAQPDGLVLDVFLPREDARDAFVSVKYSGIPD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+A LL R D++V++FRG ++TRL KL + A A LA AG+ R+ Sbjct: 131 LPEGAIVGTSSLRRRAQLLAKRPDLTVVEFRGNVQTRLKKLADGLADATFLAMAGLNRMG 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + +++ D P+ QG I IE +++ +A++++ I+ + ER+FLA L Sbjct: 191 MDDAAMGAIDLADMLPAIAQGTISIERRIDDLRARDMLAAIHDVQAGQQMAAERSFLAAL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A G ++ G +L DG R G + +G++ AQ + + Sbjct: 251 DGSCETPIAGLAMIDGDNMWLRGEILKPDGSQVFTGERRGLVTEGRAMGKELAQELLGQA 310 Query: 301 NKNVF 305 + F Sbjct: 311 GPDFF 315 >gi|320449225|ref|YP_004201321.1| porphobilinogen deaminase [Thermus scotoductus SA-01] gi|320149394|gb|ADW20772.1| porphobilinogen deaminase [Thermus scotoductus SA-01] Length = 301 Score = 341 bits (876), Expect = 7e-92, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 158/303 (52%), Gaps = 8/303 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +GTR S LALA L + P + + T+GD+ N I Sbjct: 2 RVIVVGTRGSALALAQTRFVVERLKE--SWPEAEFKVKTIKTRGDQGANPMEQAI----- 54 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+++ L+S EID AVHS KD+PT+ GL+I+A R+D RD F+ + L+DL Sbjct: 55 FVKELQEALLSREIDIAVHSLKDLPTEEPPGLKIAAIPRRQDPRDAFLGKVYKRLEDLPE 114 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSS+RRKA +L R D+ V D RG ++TRL L N + I+LA AG+ RL Sbjct: 115 GAVVGTSSIRRKAQILAHRPDLVVKDLRGNVDTRLAALGNGEYDGIILAAAGLIRLDLRN 174 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + L E P+PGQGA+ +E + A+EL ++H + D V ERAFL L Sbjct: 175 RIDQFLEPEVLLPAPGQGALALEVRQGDDLAEELCYALHHHPSHDRVRAERAFLKGLGAG 234 Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C + + A + TL G+VL DGK F G+ +A +G + AQ + + Sbjct: 235 CLAPVGALAQVAEDGTLLLEGMVLTPDGKSFIRAEIEGDASEAEELGLELAQDVLEQGGR 294 Query: 303 NVF 305 + Sbjct: 295 EIL 297 >gi|78777061|ref|YP_393376.1| hydroxymethylbilane synthase [Sulfurimonas denitrificans DSM 1251] gi|123727562|sp|Q30S90|HEM3_SULDN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78497601|gb|ABB44141.1| hydroxymethylbilane synthase [Sulfurimonas denitrificans DSM 1251] Length = 313 Score = 341 bits (875), Expect = 8e-92, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 165/305 (54%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL + ++ L + + P + + + T GDRI ++ L++IGGKGL Sbjct: 2 KKLVIATRGSQLALWQSNHIKAILQE--QNPGLEVELNVIVTTGDRIQDKALSKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ ++ GE AVHS KD+PT + GL ++A RED RD +S ++ L Sbjct: 60 FLKELEEAMLQGEAQIAVHSLKDVPTVMPDGLILAAITEREDSRDALLSEKYANIDALPK 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++V+GTSSLRR+ + + R D+ + D RG ++TR+ KL + AI+LA AGI RL Sbjct: 120 NAVVGTSSLRRRMQIQKLRPDLIIKDLRGNVDTRIRKLKEGEFDAIILAAAGINRLSLLD 179 Query: 184 VIKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +K + I E+ PS GQGA+ IE VN+ + +V + E + ER+F+ EL+ Sbjct: 180 AVKHVYPISLEEMVPSMGQGALGIEA-VNDAEVLRIVAGLEDEYSRIETTIERSFVDELE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I A T+ ++ +G+ S+ ++ D NIGR+ A Sbjct: 239 GGCQVPIGVNASVLDDGTISIRAVLGLPNGEEMLSDSKITSKKDYENIGREIAAEFIEKG 298 Query: 301 NKNVF 305 K + Sbjct: 299 AKELL 303 >gi|254452699|ref|ZP_05066136.1| porphobilinogen deaminase [Octadecabacter antarcticus 238] gi|198267105|gb|EDY91375.1| porphobilinogen deaminase [Octadecabacter antarcticus 238] Length = 321 Score = 341 bits (875), Expect = 8e-92, Method: Composition-based stats. Identities = 119/306 (38%), Positives = 174/306 (56%), Gaps = 4/306 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A ETR+ LM +P + + T GD + L IG Sbjct: 11 PLKIGTRGSPLALAQAHETRARLMIAFDLPESAFEVCVIKTSGDDRSLIDADIPLKVIGN 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ +++G ID AVHS KDMP GL ++ +LPRED RD F+S + D Sbjct: 71 KGLFTKEIEEAMLAGRIDIAVHSTKDMPVAQPDGLVLNVFLPREDARDAFVSVKYAGIAD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+A LL R D++V++FRG ++TRL KL + A A LA AG+ R+ Sbjct: 131 LPEGAIVGTSSLRRRAQLLVKRPDLTVVEFRGNVQTRLKKLADGLADATFLAMAGLNRMG 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++++D P+ QG I IE V++ +A++++ I++ + ERAFLA L Sbjct: 191 MHDAAIGAIDLDDMLPAIAQGTISIERRVDDLRARDMLAAIHNVQAGQQMAAERAFLAAL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A ++ G +L DG R G + +G + AQ + + Sbjct: 251 DGSCETPIAGLAMIDCDQMWLRGEILKPDGSQVFTGERRGLVSEGAAMGMELAQELLGQA 310 Query: 301 NKNVFN 306 + F Sbjct: 311 GPDFFE 316 >gi|163854244|ref|YP_001642287.1| porphobilinogen deaminase [Methylobacterium extorquens PA1] gi|163665849|gb|ABY33216.1| porphobilinogen deaminase [Methylobacterium extorquens PA1] Length = 309 Score = 341 bits (875), Expect = 8e-92, Method: Composition-based stats. Identities = 120/304 (39%), Positives = 172/304 (56%), Gaps = 3/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIGTR SP+ALA R ++ + P I+ +ST DR+ +R L+EIGGKG Sbjct: 4 SRALRIGTRGSPMALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIGGKG 61 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKDL 121 LFT+E+E+ L + EID AVHS KD+ T L GL I+ L R+D RD F+S + L DL Sbjct: 62 LFTKELEQALFADEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSSLRR A +L R D++++ RG TR+ KL + A LLA AG++RL Sbjct: 122 PPGARVGTSSLRRGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGM 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 V + +L++E+ P+ QGA+ IE + + L+ + T +++ ER LAELD Sbjct: 182 ADVARSVLSVEEMLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELD 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC++ IA A KG + G++ DG V R G DA IGRDA ++ + Sbjct: 242 GSCRTPIAALAQVKGDRISLDGLLFLPDGSRHWAVHREGLAADADTIGRDAGAELKRAAG 301 Query: 302 KNVF 305 F Sbjct: 302 DVYF 305 >gi|21232940|ref|NP_638857.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766987|ref|YP_241749.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris str. 8004] gi|23821678|sp|Q8P536|HEM3_XANCP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|81307026|sp|Q4UYZ4|HEM3_XANC8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|21114777|gb|AAM42781.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572319|gb|AAY47729.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris str. 8004] Length = 304 Score = 341 bits (875), Expect = 8e-92, Method: Composition-based stats. Identities = 110/301 (36%), Positives = 167/301 (55%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 3 TLRIATRKSPLALWQSEHVATALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ +L+ L L Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYATLQALPLG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL E Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLEAR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L+ ++ P+P QGA+ +E ++ + +L+ V++ T V ERA L GSC Sbjct: 181 ITARLDAPEWLPAPAQGAVAVECRGDDARIHDLLAVLDAGRTRACVEAERAMNRALHGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 +A FA +G L+ G+V ++ +G+ ++GR A + + Sbjct: 241 HVPVAAFARWEGEDLFLQGMVGSASDGRLIHAEAHGSPDATEDLGRLVADGLFEKGAAQL 300 Query: 305 F 305 Sbjct: 301 L 301 >gi|314936225|ref|ZP_07843572.1| hydroxymethylbilane synthase [Staphylococcus hominis subsp. hominis C80] gi|313654844|gb|EFS18589.1| hydroxymethylbilane synthase [Staphylococcus hominis subsp. hominis C80] Length = 310 Score = 341 bits (875), Expect = 9e-92, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 173/304 (56%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L + P I I + TKGDRI N+ L+++GGKGL Sbjct: 2 RKLVVGSRRSKLALTQSKQFIDKLKAI--DPSLEIEIKEIVTKGDRIVNQQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L + +ID A+HS KD+P+ + +GL + RE D +I+ L++L Sbjct: 60 FVKEIQNELFNNDIDMAIHSLKDVPSIIPEGLTLGCIPDREIPFDAYIAKNHVPLEELPK 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +S++GTSSLRR A +L + + RG I+TRLNKL AI+LA AG+KR+ + Sbjct: 120 NSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLNKLETEDYDAIILAAAGLKRMGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ L+ + P+ GQGA+ IE N+ + EL++ +++ + + V ER FLA +DG Sbjct: 180 DVVTTYLDKDTLLPAIGQGALGIECRRNDIELLELLQKVHNNEVANCVTAERTFLAAMDG 239 Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ I G+A Y + + F G+++ DGK +E + G D + +G ++ ++ Sbjct: 240 SCQVPIGGYANYNNNNEIEFTGLIMTPDGKERYEHTEVGT--DPVKLGNRVSEILKEQGA 297 Query: 302 KNVF 305 + Sbjct: 298 YEII 301 >gi|58583630|ref|YP_202646.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae KACC10331] gi|75433978|sp|Q5GVL2|HEM3_XANOR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|58428224|gb|AAW77261.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 304 Score = 340 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 109/301 (36%), Positives = 167/301 (55%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IG KGLF Sbjct: 3 TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGDKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ G+ DCAVHS KD+P +L + A L R D D +S+ SL+ L L Sbjct: 61 LKELELAMLRGDADCAVHSFKDVPMELDDPFVLPAILERGDPADALVSNLYASLQALPLG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL ++ Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGLDER 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L GSC Sbjct: 181 ISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 +A A +G L+ G+V ++ +G+ D ++GR AQ + + Sbjct: 241 HVPVAALARWEGEGLFLQGMVGSASDGRLIHADAHGSADDTQDLGRRVAQGLFDKGAAQL 300 Query: 305 F 305 Sbjct: 301 L 301 >gi|223648136|gb|ACN10826.1| Porphobilinogen deaminase [Salmo salar] Length = 359 Score = 340 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 104/302 (34%), Positives = 152/302 (50%), Gaps = 6/302 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIGTR S LA L ++ P ++ I+ ++T GD+I + L++IG K Sbjct: 16 SRVIRIGTRKSQLARIQTDSVAEKLKGLY--PDVHLEIVGMTTTGDKILDTALSKIGEKS 73 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119 LFT+E+E L E+D VHS KD+PT L G I A L RE+ D + H +SL Sbjct: 74 LFTKELETALEKNEVDLVVHSLKDLPTTLPPGFTIGAVLKRENPHDAVVLHPKNMGKSLD 133 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKR 178 L SVIGTSSLRR A L + + D RG + TRL KL+ AI+LA AG++R Sbjct: 134 TLPDKSVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDEKDDFSAIILAAAGLRR 193 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + + +IL ED + GQGA+ IE + E+V V++ +T ERAFL Sbjct: 194 MGWDSRVSQILGPEDCMYAVGQGALAIEVRARDEDILEMVSVLHDPNTVLRCIAERAFLR 253 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+G C +A K S LY G V + DG + + + + + ++ Sbjct: 254 RLEGGCSVPVAVHTEVKDSQLYLTGAVYSLDGSDSLKETMQTSIASDNKVEEQVDERVQR 313 Query: 299 IS 300 + Sbjct: 314 VG 315 >gi|326930594|ref|XP_003211431.1| PREDICTED: vacuolar protein sorting-associated protein 11 homolog, partial [Meleagris gallopavo] Length = 1060 Score = 340 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 102/325 (31%), Positives = 150/325 (46%), Gaps = 35/325 (10%) Query: 14 PLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLI 73 LA L + + P I+ +ST GD+I + L++IG K LFT+E+E L Sbjct: 728 QLARIQTDSVVEMLREFY--PDLCFEIVAMSTTGDKILDTALSKIGEKSLFTKELENALE 785 Query: 74 SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDLALHSVIGTS 130 E+D VHS KD+PT L G I A RE+ D + H ++L L SVIGTS Sbjct: 786 RNEVDLVVHSLKDLPTSLPPGFTIGAICKRENPLDAVVFHPKNCGKTLSLLPEKSVIGTS 845 Query: 131 SLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKRLKKEKVIKEIL 189 SLRR A L + + D RG + TRL KL+ + AI+LA AG+KR+ E I ++L Sbjct: 846 SLRRAAQLKKKFPQLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRMGWENRIGQLL 905 Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 + ED + GQGA+ +E + + +V V++ +T ERAF+ L+G C +A Sbjct: 906 SPEDCLYAVGQGALAVEVRAKDQETLNMVSVLHDGETVLCCIAERAFMKHLEGGCSVPVA 965 Query: 250 GFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-------------- 284 K LY G V + DG + + +G D Sbjct: 966 VNTMLKDGQLYLTGAVYSLDGSDSLKETMQASVNYPQRNEDGPNDDVQHVGITAKNVSGQ 1025 Query: 285 ----AINIGRDAAQYIRFISNKNVF 305 A N+G + A + K++ Sbjct: 1026 AQEAAENLGIELASLLLSKGAKHIL 1050 >gi|206603978|gb|EDZ40458.1| Porphobilinogen deaminase [Leptospirillum sp. Group II '5-way CG'] Length = 314 Score = 340 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 113/310 (36%), Positives = 164/310 (52%), Gaps = 7/310 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M P +IG+R S LAL A S + V I P I+ + T GD I +R L+E+GG Sbjct: 1 MSLMPLKIGSRGSELALWQARHVASMIESVSGILP---EIVVIKTTGDIILDRQLSEVGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L+ EID AVHS KD+P L GL ++A L RED RDVF+S +K Sbjct: 58 KGLFVKEIEEALLRKEIDLAVHSMKDVPAFLPPGLTLAATLKREDPRDVFLSPHYPDIKS 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR A + +RSD+ I RG + TR+ K+ + AI+LA AG+ RL Sbjct: 118 LPHKARVGTSSLRRLAQIREFRSDLEFIPLRGNVGTRIRKMEDGVVEAIILAGAGLLRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++E ++ + P+ GQGA+ +E ++ L++ ++ E T SV ER L L Sbjct: 178 HANRVREWISPQVLLPAIGQGALGLEIRTDDETTGTLIRSLSDESTHLSVAAERGVLQSL 237 Query: 241 DGSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYI 296 +G C+ IA +A + + TL G VL G +A +G D + Sbjct: 238 NGGCQVPIAAYAVWEKNRTLSLEGRVLDISGTRRIHARETRDIATIDEAYQMGMDLGNRL 297 Query: 297 RFISNKNVFN 306 + + N Sbjct: 298 LADGAEEILN 307 >gi|149928342|ref|ZP_01916583.1| porphobilinogen deaminase [Limnobacter sp. MED105] gi|149822927|gb|EDM82172.1| porphobilinogen deaminase [Limnobacter sp. MED105] Length = 310 Score = 340 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 105/303 (34%), Positives = 161/303 (53%), Gaps = 3/303 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI +R S LA+ A R L+ + + + I+ ++TKGD+I +R+L +IGGKGLF Sbjct: 2 KIRIASRESRLAMWQAEHVRDLLLALPGVSG--VEIVGMTTKGDQILDRSLAKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L+ G D AVHS KD+P + Q+ ++ RED D F+S+ SL DL Sbjct: 60 IKELEYALLEGRADLAVHSGKDIPMDVDPEFQLLGFMTREDPHDAFVSNDYASLADLPAG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+G+SSLRR+A +L + V RG ++TRL KL++ + AI+LA AG+KRL Sbjct: 120 AVVGSSSLRRQAQVLARYPHLKVEPLRGNLDTRLGKLDSGQYQAIVLAAAGLKRLGLHSR 179 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ ++ D P+ GQGA+ +E + + ELVK + V+ ER+ L GSC Sbjct: 180 IRNVIESTDMLPAVGQGALGLEIRAGDSQLAELVKPLIDPVCTALVSAERSVSKALGGSC 239 Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 + IAG+A T G+V + DGK E S + D + + + Sbjct: 240 QVPIAGYATLNDAQTFTLRGLVASPDGKAVIEKSAQASLQDWETAANRVIEGLLQEGAQA 299 Query: 304 VFN 306 + Sbjct: 300 LIE 302 >gi|255322661|ref|ZP_05363805.1| porphobilinogen deaminase [Campylobacter showae RM3277] gi|255300222|gb|EET79495.1| porphobilinogen deaminase [Campylobacter showae RM3277] Length = 311 Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats. Identities = 100/307 (32%), Positives = 156/307 (50%), Gaps = 7/307 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK +I TR S LA+ + R + + + P + + + TKGD I + L +IGG Sbjct: 1 MEK--LKIATRKSVLAMWQSEHIRDKI--LSRYPQIAVELTGMKTKGDVILDTPLAKIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E ++SGE AVHS KD+P +GL ++A RED+RD +S +D Sbjct: 57 KGLFTKELEDSMLSGETHIAVHSLKDVPVVFPEGLVLAAICSREDVRDAMLSEKYAKFED 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRRK LL R D+ +I RG ++TRL KL + AI+LA AG+ RL Sbjct: 117 LPEGARVGTTSLRRKMQLLAMRPDLEIISLRGNVQTRLRKLKEGEFDAIILAMAGVNRLN 176 Query: 181 KEKVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + I+ ++ P+ GQGA+ IE + + L++ + E ER F+A Sbjct: 177 LRSEVAHIVPFELDQMVPAMGQGALGIEARE-DSEILNLIEFLKDEKAVIETTVERDFVA 235 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+G C+ I A G + +V DG + + + ++G + + Sbjct: 236 MLEGGCQVPIGVNANLNGDKIEIRAVVGLPDGSESIRENIVAQKSEWKSVGAELGRIFIG 295 Query: 299 ISNKNVF 305 K + Sbjct: 296 KGAKELL 302 >gi|302391331|ref|YP_003827151.1| hydroxymethylbilane synthase [Acetohalobium arabaticum DSM 5501] gi|302203408|gb|ADL12086.1| hydroxymethylbilane synthase [Acetohalobium arabaticum DSM 5501] Length = 314 Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats. Identities = 106/308 (34%), Positives = 163/308 (52%), Gaps = 4/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ IGTR S LA+ A L + + + + TKGD+I + L+++GG Sbjct: 1 MKGNKVIIGTRSSDLAVGQAEIVAEMLGKA--VSEYEFELEKIKTKGDKILDSPLSQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ EID AVHS KDMP +L +GL + + R D RD +S+ ++L + Sbjct: 59 KGLFIKELEVSLLEEEIDLAVHSMKDMPAELPEGLAVLGFPERVDSRDALVSNGDRNLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKR 178 L + IGT SLRR + LL +R D+ V+ RG I TRL KL + AI+LA AG+ R Sbjct: 119 LPTGARIGTGSLRRTSQLLNYRPDLEVVPIRGNINTRLEKLTAEELNLDAIVLAAAGLIR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + I E L+ E P+ GQGA+ IE ++ + + L+ I+ + T + ER FL Sbjct: 179 MGWKDKITEYLDDEVMLPAAGQGALAIEAREDDEEIKTLINKIDDQRTRYILQAERGFLE 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 LDG C+ I A +G + G+V DG+ G+ +A +G + A+ + Sbjct: 239 RLDGDCQVPIGALAEIEGEEITLEGMVATLDGQKHLRDQITGSVGEAEELGIELAEELIA 298 Query: 299 ISNKNVFN 306 + + Sbjct: 299 KGAEKILQ 306 >gi|325922553|ref|ZP_08184310.1| hydroxymethylbilane synthase [Xanthomonas gardneri ATCC 19865] gi|325546966|gb|EGD18063.1| hydroxymethylbilane synthase [Xanthomonas gardneri ATCC 19865] Length = 304 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 109/301 (36%), Positives = 168/301 (55%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGGKGLF Sbjct: 3 TLRIATRKSPLALWQSEHVATALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ GE DCAVHS KD+P +L + A + R D D +S+ +++ L L Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDAPFVLPAIMERGDAADALVSNLYATVQALPLG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL + Sbjct: 121 ARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLGFDAR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L++ ++ P+P QGA+ +E ++ L+ V++ T V ERA L GSC Sbjct: 181 ITARLDVPEWLPAPAQGAVAVECRGDDAHIHGLLAVLDAGRTRACVEAERAMNRALHGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 +A FA +G L+ G+V ++ +G+ D ++GR AQ + + Sbjct: 241 HVPVAAFARWEGDGLFLQGMVGSASDGRLIHAEAHGSAEDTESLGRLVAQGLFDKGAAQL 300 Query: 305 F 305 Sbjct: 301 L 301 >gi|260431649|ref|ZP_05785620.1| porphobilinogen deaminase [Silicibacter lacuscaerulensis ITI-1157] gi|260415477|gb|EEX08736.1| porphobilinogen deaminase [Silicibacter lacuscaerulensis ITI-1157] Length = 320 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 130/307 (42%), Positives = 178/307 (57%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A ETR L D +P I+ + T GD +R L EIG Sbjct: 11 PLKIGTRGSPLALAQAHETRQRLCDAFDLPEQAFEIVVIKTTGDNRAMIDADRPLKEIGN 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ ++ G ID AVHS KDMP + +GL + +LPRED+RD FIS S+ D Sbjct: 71 KGLFTKEIEEAMLGGYIDIAVHSTKDMPVEQPQGLVLDTFLPREDVRDAFISPRLNSIHD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A LL R D++V++FRG ++TRL KL + A LA AG++RL Sbjct: 131 LPEGAVVGTSSLRRRAQLLYRRPDLNVVEFRGNVQTRLKKLADGVAECTFLAMAGLRRLN 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + V ++ +D P+ QG I IE ++ +A E+++ I+H +T + ERA LA L Sbjct: 191 MQDVPATAISPDDMLPAIAQGTIGIERRADDHRAAEMLEAIHHPETAQRLAAERALLAAL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A L G VL DG + G DA +GR A + + Sbjct: 251 DGSCETPIAGLAEITDGQLRLRGEVLRPDGSESVVSEQMGATEDATEMGRAMASDLLRQA 310 Query: 301 NKNVFNF 307 F + Sbjct: 311 GPGFFEW 317 >gi|220921724|ref|YP_002497025.1| porphobilinogen deaminase [Methylobacterium nodulans ORS 2060] gi|219946330|gb|ACL56722.1| porphobilinogen deaminase [Methylobacterium nodulans ORS 2060] Length = 318 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 114/304 (37%), Positives = 175/304 (57%), Gaps = 2/304 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEI 58 M +P RIGTR SP+ALA R + H P + ++ ++T D++ +R L+ I Sbjct: 8 MVHRPLRIGTRGSPMALAQTGMVRDRIAAAHPHLAEPGAMELVVVNTVADKVLDRPLSAI 67 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLFT+E+E+ L +GEID AVHS KD+ T L GL I++ L R+D RD F+S A+SL Sbjct: 68 GGKGLFTKELEQALFAGEIDLAVHSMKDVETWLPDGLVIASILERDDPRDAFLSLKARSL 127 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L S +GTSSLRR A +L R D+ ++ RG TR+ +L A LLA AG++R Sbjct: 128 AELPAGSRVGTSSLRRGAQVLMRRPDLQIVPLRGNANTRIRRLEEGACDATLLAIAGLER 187 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + +E++ + P+ QGA+ IE + + +L++ + T ++ ER LA Sbjct: 188 LGLAHLAQEVMGTDTMLPAVAQGALGIECRAADQELIDLLQAVACPRTTTALAAERGLLA 247 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 ELDGSC++ IA A +G L G++ DG +R+G +A IG++A ++ Sbjct: 248 ELDGSCRTPIAALAEIEGDRLTLNGLLFLPDGSAHWATTRSGPAAEAAAIGKEAGADLKA 307 Query: 299 ISNK 302 + + Sbjct: 308 QAGE 311 >gi|154174368|ref|YP_001408386.1| porphobilinogen deaminase [Campylobacter curvus 525.92] gi|259647805|sp|A7GYU4|HEM3_CAMC5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|112802609|gb|EAT99953.1| porphobilinogen deaminase [Campylobacter curvus 525.92] Length = 311 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 158/304 (51%), Gaps = 5/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR S LAL + ++ LM H + ++ + TKGD I + L +IGGKGL Sbjct: 2 KILKIATRKSALALWQSEHIKARLMAQHA--GLQVELVGMKTKGDVILDTPLAKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E ++SG+ AVHS KD+P L GL ++A RED+RD IS DL Sbjct: 60 FTKELEDSMLSGQTHIAVHSLKDVPVAFLDGLVLAAICSREDVRDAMISQRYVKFDDLPQ 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GT+SLRRK LLR R D+++I RG ++TRL KL + AI+LA AGI RL Sbjct: 120 SAKVGTTSLRRKMQLLRMRPDLNIISLRGNVQTRLRKLKEGEFDAIILAMAGINRLNLAD 179 Query: 184 VIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I + P+ GQGA+ +E V++ + E +K +N E + ER F+ L+ Sbjct: 180 EVAHIYPFDIAQMTPAMGQGALGVEA-VDDAQILEKIKFLNDERSVIETRVERDFVTLLE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I A + IV DG + + + ++G++ A+ Sbjct: 239 GGCQVPIGINARLASEEIEINAIVGLPDGSEVITENLTAKKSEFESVGKELAREFIARGA 298 Query: 302 KNVF 305 K + Sbjct: 299 KELL 302 >gi|85713686|ref|ZP_01044676.1| porphobilinogen deaminase [Nitrobacter sp. Nb-311A] gi|85699590|gb|EAQ37457.1| porphobilinogen deaminase [Nitrobacter sp. Nb-311A] Length = 316 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 138/299 (46%), Positives = 191/299 (63%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 IGTR SPLALA A E R L H++ P I I + T GD I +R L ++GGKGLFT+ Sbjct: 12 TIGTRGSPLALAQAHEVRDRLARAHQVAPERIAIKTIRTSGDAIQDRPLFDVGGKGLFTK 71 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE+ L++G ID AVHS+KD+PT L + A+LPRED+RDVFIS A SL DL S+ Sbjct: 72 EIEEALLAGAIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDVFISPRAASLHDLPAGSI 131 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GT+SLRR+A++LR R D+ V RG +ETRL K++ +A A LLA AG+ RL + Sbjct: 132 VGTASLRRQAMVLRLRPDLKVNALRGNVETRLRKIDAGEADATLLALAGLNRLGLQDKAT 191 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 IL E+F P+ GQGAI IE+ ++ + VK I +T +++ ER+FLA LDGSC++ Sbjct: 192 RILETEEFLPAVGQGAIAIESRRDDDRINAFVKAIGDSETEVALSAERSFLALLDGSCRT 251 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 I G G ++F G++++ DG +E +R G R DA +G DAA +R + + F Sbjct: 252 PIGGHCRVNGDRIHFRGLIISPDGTESYETTREGARADAAALGADAAHELRERAGEKFF 310 >gi|223040967|ref|ZP_03611228.1| porphobilinogen deaminase [Campylobacter rectus RM3267] gi|222877764|gb|EEF12884.1| porphobilinogen deaminase [Campylobacter rectus RM3267] Length = 309 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 100/307 (32%), Positives = 156/307 (50%), Gaps = 7/307 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK +I TR S LA+ + R + + + P + + + TKGD I + L +IGG Sbjct: 1 MEK--LKIATRKSVLAMWQSEHIRDKI--LSRYPELAVELTGMKTKGDVILDTPLAKIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E ++SGE AVHS KD+P +GL ++A RED+RD +S +D Sbjct: 57 KGLFTKELEDSMLSGETHIAVHSLKDVPVVFPEGLVLAAICSREDVRDAMLSEKYAKFED 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRRK LL R D+ +I RG ++TRL KL + AI+LA AG+ RL Sbjct: 117 LPEGARVGTTSLRRKMQLLAMRPDLEIISLRGNVQTRLRKLKEGEFDAIILAMAGVNRLN 176 Query: 181 KEKVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + I+ ++ P+ GQGA+ IE + + L++ + E ER F+A Sbjct: 177 LRSEVAHIVPFELDQMIPAMGQGALGIEARE-DAEILNLIEFLKDEKAVIETTVERDFVA 235 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+G C+ I A G + +V DG + + + ++G + + Sbjct: 236 MLEGGCQVPIGVNANLNGDKIEIRAVVGLPDGSESIRENIVAQKSEWKSVGAELGRIFIG 295 Query: 299 ISNKNVF 305 K + Sbjct: 296 KGAKELL 302 >gi|120610679|ref|YP_970357.1| porphobilinogen deaminase [Acidovorax citrulli AAC00-1] gi|120589143|gb|ABM32583.1| porphobilinogen deaminase [Acidovorax citrulli AAC00-1] Length = 318 Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats. Identities = 106/303 (34%), Positives = 157/303 (51%), Gaps = 9/303 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P I TR S LAL A ++ L H + ++ ++T+GDRI +RTL+++GGKGLF Sbjct: 17 PIVIATRESRLALWQAEHVQALLRAR----GHAVELLGMTTQGDRILDRTLSKVGGKGLF 72 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G AVHS KD+P +L +G +++ + RED RD F+S L DL Sbjct: 73 VKELEVALEEGRAHVAVHSLKDVPMELPEGFELACVMEREDPRDAFVSPRHACLADLPQG 132 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL E Sbjct: 133 AVVGTSSLRRQVLLQALRPDLVIQPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGLEGR 192 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + ++ P+ GQGA+ +E + V + H+ TW V ERA L GSC Sbjct: 193 IRALFEPDEMLPAAGQGALGLEVRSERHDLLQAVAPLAHQATWLCVAAERAVSRALGGSC 252 Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDG-KIFHEVSRNGNRC---DAINIGRDAAQYIRFI 299 +A TL G +G + V + +A +G A +R Sbjct: 253 SVPLAAHGRWTDAGTLRLDGAWGDPEGIRPLVRVQISAPVASLPEAEALGSAVAARLRAD 312 Query: 300 SNK 302 + Sbjct: 313 GAQ 315 >gi|238022038|ref|ZP_04602464.1| hypothetical protein GCWU000324_01943 [Kingella oralis ATCC 51147] gi|237866652|gb|EEP67694.1| hypothetical protein GCWU000324_01943 [Kingella oralis ATCC 51147] Length = 316 Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats. Identities = 100/303 (33%), Positives = 160/303 (52%), Gaps = 3/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + I +R S LA+ A ++ L ++ P I II ++T+GD+I ++TL++IGGKGL Sbjct: 8 QTLTIASRESALAMWQARHIQAQLQSLY--PQCQIHIIGMTTQGDQILDKTLSKIGGKGL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L D AVHS KD+P L +G ++A R + D F+S+ L++L Sbjct: 66 FIKELETALQENRADLAVHSIKDVPMDLPQGFTLAAIGERANPFDAFVSNRYTRLEELPH 125 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+A L +++ RG ++TRL KL+N AI+LA AG++RL+ + Sbjct: 126 GAIVGTSSLRREAQLRARFPHLTIRPLRGNVQTRLAKLDNGDYDAIILAAAGLERLELHE 185 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ +L D P+ GQGA+ IE + +++ +NH T V ERA L GS Sbjct: 186 RIRAVLPPADSLPAAGQGALGIEIAAHRTDLIDVLLPLNHAKTAACVTAERALARALGGS 245 Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ +A + L G+V DG + A +GR A+ + + Sbjct: 246 CQVPLAAYCTADDHGLLTLSGLVGHPDGSVILTAQAQAPAAYADALGRAVAKKLADDGAQ 305 Query: 303 NVF 305 + Sbjct: 306 ELI 308 >gi|134094241|ref|YP_001099316.1| porphobilinogen deaminase [Herminiimonas arsenicoxydans] gi|133738144|emb|CAL61189.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Herminiimonas arsenicoxydans] Length = 317 Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats. Identities = 110/303 (36%), Positives = 165/303 (54%), Gaps = 2/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LA+ A R L ++ P I I+ ++T+GD+I +RTL+++GGKGL Sbjct: 7 KKLVIASRESRLAMWQAEHVREKLALLY--PQCAIEILGMTTRGDQILDRTLSKVGGKGL 64 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E + D AVHS KD+P L +G ++A L RED RD F+S+ SL DL Sbjct: 65 FVKELEVAIAERRADLAVHSLKDVPMSLPEGFALAAVLEREDPRDAFVSNDYASLDDLPD 124 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+AL+ + + RG ++TRL KL+ + AI+LA AG+KRL + Sbjct: 125 GAIVGTSSLRRQALIAARYPKLVIRPLRGNLDTRLGKLDKGEYAAIILAAAGLKRLGMPQ 184 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ +L+ E P+PGQGA+ IE H + QE + +NHE T +V ER GS Sbjct: 185 RIRAVLDPEQSLPAPGQGAMGIEIHADRADLQEWLAPLNHEATAQAVTAERTVSRNFGGS 244 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ +A FA + T+ ++ DGK NG +G A+ + Sbjct: 245 CQIPLAAFATIENGTMRLRAMIATPDGKRVARADLNGAAHAPEALGGQIAELLHQQEANA 304 Query: 304 VFN 306 + Sbjct: 305 ILE 307 >gi|154251802|ref|YP_001412626.1| porphobilinogen deaminase [Parvibaculum lavamentivorans DS-1] gi|154155752|gb|ABS62969.1| porphobilinogen deaminase [Parvibaculum lavamentivorans DS-1] Length = 308 Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats. Identities = 131/307 (42%), Positives = 183/307 (59%), Gaps = 2/307 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNI-VIIPLSTKGDRITNRTLTEIG 59 M+++ +RIGTR S LAL A E + P + I+ +ST GDR+ +R L+EIG Sbjct: 1 MQRR-YRIGTRGSRLALIQANEVARRIALALHAPVEEVTEIVVISTAGDRVQDRALSEIG 59 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLFTEEIE++L ID AVHS KDMPT L +GL I L R D RD F+S A SL Sbjct: 60 GKGLFTEEIEEQLADARIDVAVHSMKDMPTLLPEGLVIDCLLERADPRDAFLSSKANSLM 119 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +V+GTSSLRR A + R D++V+ FRG ++TRL KL + A A LLA AG+ R+ Sbjct: 120 SLPQGAVVGTSSLRRAAQVRARRPDVTVVPFRGNVDTRLKKLADGVADATLLAMAGLTRM 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + L+ E+ P+ QGAI IE + +A L++ ++H +T V ERAFLA Sbjct: 180 DLLECVTAPLSPEELLPAVAQGAIGIERRAADDEAAHLLEKLHHTETGLRVAAERAFLAV 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 LDGSC++ IA A G + ++L DG HE R G DA+ +G+DA + ++ Sbjct: 240 LDGSCRTPIAALAEISGDHMRLRTMILTPDGAEIHETEREGLAADAVLLGQDAGEELKGR 299 Query: 300 SNKNVFN 306 + + F+ Sbjct: 300 AGPHFFD 306 >gi|71892349|ref|YP_278083.1| porphobilinogen deaminase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|123747812|sp|Q491Z6|HEM3_BLOPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|71796455|gb|AAZ41206.1| porphobilinogen deaminase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 300 Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats. Identities = 97/297 (32%), Positives = 145/297 (48%), Gaps = 2/297 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ K +I TR S LA+ A + L H P +I ++P+ T GD+ N Sbjct: 1 MKNKILKIATRKSQLAICQAQYVHNELKHYH--PTLSIELMPIVTTGDKFLNIDAKNKIK 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG F +E+E LI+ D AVHS KD+ L L + R D RD F+S ++ Sbjct: 59 KGAFIKELEHALINFRADIAVHSMKDITVPLPDELTLPVLCKRNDPRDAFVSLKYPNIDT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + SVIGTSSLRR+ + R D+ V + RG I+TRL KL + AI+LA AG++RL+ Sbjct: 119 LPIGSVIGTSSLRRQCQIRAHRPDLVVSNLRGNIDTRLKKLQYGQYDAIVLAVAGLQRLQ 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ ++ D P+ GQG I IE N+ L+ + H++T V ERA L Sbjct: 179 LHEYIRVHIDPSDLLPAMGQGVIAIECRSNDADILSLLSPLYHQETSFRVRAERAVTTYL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + C IA +A + ++ ++ DG A +G A+ + Sbjct: 239 ESYCHLPIASYAEIEEDQIWLRALIGLPDGSKIIRTEGRAPLDQAEKLGFILAEDLL 295 >gi|34557903|ref|NP_907718.1| porphobilinogen deaminase [Wolinella succinogenes DSM 1740] gi|55976472|sp|Q7M8L2|HEM3_WOLSU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|34483621|emb|CAE10618.1| PORPHOBILINOGEN DEAMINASE [Wolinella succinogenes] Length = 311 Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats. Identities = 103/303 (33%), Positives = 163/303 (53%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IGTR S LAL A ++ L H+ ++ + + TKGD+I + L ++GGKGLF Sbjct: 3 KIIIGTRGSVLALWQAEYVKAELERAHE--GLSVELKIVKTKGDKILDVPLAKVGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ ++ GEID AVHS KD+P +L++GL +SA RED+RD F+S SL+ L L Sbjct: 61 TKELEEMMLQGEIDLAVHSLKDVPVELIEGLTLSAITEREDVRDCFLSDKYASLETLPLG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT+SLRR + RSD+ RG ++TR+ +L AI+LA AG+ RL K Sbjct: 121 AKVGTTSLRRSMQIKSMRSDLDTESLRGNVQTRIKRLKEGDFDAIILATAGVNRLDLWKE 180 Query: 185 IKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + ++ E P+ GQ A+ IE + + L +++ + ER F+ L+G Sbjct: 181 VNYVIPIDTEMMIPAMGQAALGIECKEGSEAFR-LTQILEDKKARIETTAEREFVRVLEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I AY +G TL+ V DG + + +A+ +GR+ A + + Sbjct: 240 GCQVPIGANAYLEGETLHLKVAVGLPDGSEILMDRLSAPKGEAVRLGRELAARLIAKGAR 299 Query: 303 NVF 305 + Sbjct: 300 ELL 302 >gi|124514859|gb|EAY56370.1| Porphobilinogen deaminase [Leptospirillum rubarum] Length = 314 Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats. Identities = 113/310 (36%), Positives = 162/310 (52%), Gaps = 7/310 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M P +IG+R S LAL A S + V + P I+ + T GD I +R L+E+GG Sbjct: 1 MLPTPLKIGSRGSELALWQARHVASLIESVSGVLP---EIVVIKTTGDIILDRQLSEVGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L+ EID AVHS KD+P L GL ++A L RED RDVF+S +K Sbjct: 58 KGLFVKEIEEALLRKEIDLAVHSMKDVPAFLPPGLTLAATLTREDPRDVFLSPHYPDIKS 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR A + R+D+ I RG + TR+ K+ AI+LA AG+ RL Sbjct: 118 LPQKARVGTSSLRRLAQIREIRNDLEFIPLRGNVGTRIRKMEEGVVDAIILAGAGLLRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++E ++ P+ GQGA+ +E ++ LV+ ++ E T SV ER L L Sbjct: 178 HANRVREWISPRVLLPAIGQGALGLEIRTDDETTGTLVRSLSDESTHLSVAAERGVLQSL 237 Query: 241 DGSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYI 296 +G C+ IA +A + + TL G VL G + DA +G D + Sbjct: 238 NGGCQVPIAAYAVWEKNRTLSLEGRVLDISGTRRIHARETRDIVTIDDAYQMGIDLGNRL 297 Query: 297 RFISNKNVFN 306 + + N Sbjct: 298 LSDGAEEILN 307 >gi|239637532|ref|ZP_04678504.1| porphobilinogen deaminase [Staphylococcus warneri L37603] gi|239596750|gb|EEQ79275.1| porphobilinogen deaminase [Staphylococcus warneri L37603] Length = 308 Score = 338 bits (868), Expect = 5e-91, Method: Composition-based stats. Identities = 103/304 (33%), Positives = 169/304 (55%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + + L V P +I I + TKGDRI ++ L+++GGKGL Sbjct: 2 RKLVVGSRRSKLALTQSQQFIDKLKQVR--PDLDIEIKEIVTKGDRIVDKQLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI+ +L +ID A+HS KD+P+ + +GL + RE D +IS L++L Sbjct: 60 FVKEIQNELFEKQIDMAIHSLKDVPSVIPEGLTLGCIPDREVPFDAYISKNHTPLRELPE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 S+IGTSSLRR A +L + + RG I+TRL KL AI+LA AG++R+ + Sbjct: 120 GSIIGTSSLRRGAQILSKYPHLEIKWIRGNIDTRLQKLETEDYDAIILAAAGLRRMGWSD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ L+ + P+ GQGA+ IE ++ + EL+K ++++D V ER FLAE+DG Sbjct: 180 DIVTTYLDKDILLPAIGQGALGIECRSDDEELLELLKEVHNKDVEKCVTAERTFLAEMDG 239 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC+ I G+A + F G+++ DG +E + G +G++ ++ ++ Sbjct: 240 SCQVPIGGYATINSQQQIEFTGLIMTPDGTERYEHTAIG--ESPTELGKEVSRVLKEQGA 297 Query: 302 KNVF 305 + Sbjct: 298 YEII 301 >gi|262199948|ref|YP_003271157.1| porphobilinogen deaminase [Haliangium ochraceum DSM 14365] gi|262083295|gb|ACY19264.1| porphobilinogen deaminase [Haliangium ochraceum DSM 14365] Length = 320 Score = 338 bits (868), Expect = 6e-91, Method: Composition-based stats. Identities = 105/317 (33%), Positives = 161/317 (50%), Gaps = 13/317 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ I TR S LAL A R + V P + ++ + T+GD+I + L++IGG Sbjct: 1 MSERTIHISTRGSQLALWQAHHVRDEIRRVR--PAWQVELVIIKTQGDKILDVPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K LF +EIE+ L+ G D AVHS KD+P +L GL ++A RED D + + L + Sbjct: 59 KALFVKEIEQALLDGRADVAVHSMKDVPAELAPGLFMAATSRREDPYDALCTRDGRGLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LA + +GTSSLRR+ +L R D+ + RG + TRL KL++ A++LA AG+KRL Sbjct: 119 LAEGATLGTSSLRRQCQILARRPDLRIEMLRGNVPTRLGKLDDGSFDAVILAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNN-----PKAQELVKVINHEDTWDSVNCERA 235 + I + L+ P+ GQG + IET + + L + ++ V ERA Sbjct: 179 HGERISQRLDGGVCVPAVGQGVLGIETRQGDAPADRELVEALREALHDPAEERRVVAERA 238 Query: 236 FLAELDGSCKSAIAGFAYCKGS------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +A L GSC++ +A A +G TL G+ DG G DA +G Sbjct: 239 MMAALGGSCQTPLAAHASYRGDSDPVAGTLVIEGLCGRPDGSEILRAQVEGRAEDAQALG 298 Query: 290 RDAAQYIRFISNKNVFN 306 A+ +R + + + Sbjct: 299 SSLAEELRGQGAQAIID 315 >gi|298292774|ref|YP_003694713.1| porphobilinogen deaminase [Starkeya novella DSM 506] gi|296929285|gb|ADH90094.1| porphobilinogen deaminase [Starkeya novella DSM 506] Length = 309 Score = 338 bits (867), Expect = 7e-91, Method: Composition-based stats. Identities = 124/300 (41%), Positives = 176/300 (58%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR SPLAL A R +L+ H P + + + T GD IT+R L+E GGKGLFT Sbjct: 8 LRLGTRGSPLALWQAHAVRDALVKAHGWAPEAVEVQVIRTTGDAITDRALSEAGGKGLFT 67 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ ID AVHSAKDM TKL GL + YLPR D+RD I SL DL + Sbjct: 68 KELEEALLDRRIDLAVHSAKDMATKLPDGLHLVGYLPRADVRDALILREGSSLADLKPGA 127 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT+SLRR+A L R R D+ V RG + TRL+K+ + + LLA AG+ RL Sbjct: 128 KVGTASLRREAQLRRLRPDLQVSLLRGNVHTRLSKVESGEFDGTLLALAGLTRLGMADKA 187 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +L++ DF P+ GQGA+ IE+ + L+ + T ++ ERA+L ELDGSC+ Sbjct: 188 SALLDVADFLPAVGQGAVAIESRFGDIAVDALLVPVTCPATGLALRVERAYLGELDGSCR 247 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + I G A +G + F G+VL+ DG ++E+ R G A+ +G A Q +R + ++ Sbjct: 248 TPIGGLAEVQGEEIRFRGVVLSPDGSRYYEIVRYGPANRALELGLAAGQEMRAMVPADLL 307 >gi|268317443|ref|YP_003291162.1| porphobilinogen deaminase [Rhodothermus marinus DSM 4252] gi|262334977|gb|ACY48774.1| porphobilinogen deaminase [Rhodothermus marinus DSM 4252] Length = 312 Score = 338 bits (867), Expect = 8e-91, Method: Composition-based stats. Identities = 106/309 (34%), Positives = 167/309 (54%), Gaps = 7/309 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +GTR S LAL A RS L ++ + + T GD I + L +IG Sbjct: 1 MPEPTLILGTRGSALALRQATLIRSFLEAR----GVSVQVEIIRTTGDHIQDVPLAKIGA 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ--SL 118 KGLFT+E+++ L+ G ID AVHS KD+PT++ +GL ++A R DVF++H L Sbjct: 57 KGLFTKELDQALLEGRIDLAVHSLKDLPTEMPEGLVVAAVPERAPPWDVFVAHPDFAGRL 116 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +DL +V+ TSSLRR+A L WRSD+ V+ RG ++TRL KL H ++LA AG++R Sbjct: 117 EDLPTGAVVATSSLRRQAQLRAWRSDLQVVPVRGNVDTRLRKLEAEGWHGLILAEAGLQR 176 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + +++ + E P+ GQGA+ + N + + L++ ++H T +V ERA L Sbjct: 177 LGLLERVRQRIAPEILLPAVGQGALGVVCAEANRRVRALLQALHHAPTAAAVRAERALLH 236 Query: 239 ELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L G C+ +A A + TL G V++ DG+ E + G + +G A+ + Sbjct: 237 ALQGGCQVPVAALAAVEADGTLVLRGRVVSLDGRQLVEGVQRGAMAEPEAVGEALAETLL 296 Query: 298 FISNKNVFN 306 + + Sbjct: 297 QQGARAILE 305 >gi|254463278|ref|ZP_05076694.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2083] gi|206679867|gb|EDZ44354.1| porphobilinogen deaminase [Rhodobacteraceae bacterium HTCC2083] Length = 295 Score = 337 bits (866), Expect = 9e-91, Method: Composition-based stats. Identities = 128/293 (43%), Positives = 173/293 (59%) Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74 +ALA A+ETR L +P VI + T GD+I +R L EIGGKGLFT EIE ++S Sbjct: 1 MALAQAYETRRRLSGAFDLPEEAFVIKVIKTTGDKILDRPLKEIGGKGLFTREIEDDMLS 60 Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRR 134 G ID AVHS KDMP +GL + YLPRED+RD F+S + L DL +V+GTSSLRR Sbjct: 61 GAIDIAVHSMKDMPVLQPEGLVLDTYLPREDVRDAFVSSGHERLADLPSGAVVGTSSLRR 120 Query: 135 KALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDF 194 +A LL +R D++V++FRG ++TRL KL + A LA AG++RL V K + E+ Sbjct: 121 RAQLLNYRPDLNVVEFRGNVQTRLKKLEDKVADCTFLAMAGLRRLDMAHVAKSAIETEEM 180 Query: 195 PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254 P+ QGAI IE +N+ A E++ I+ T + ERAFLA LDGSC++ IAG A Sbjct: 181 LPAVAQGAIGIERRINDTNAAEMLAAIHDTQTGQRLAAERAFLAALDGSCETPIAGLAEL 240 Query: 255 KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307 GS + F G VL DG +G D + +G A + + + F + Sbjct: 241 DGSNMRFRGQVLRPDGSESIGDDVSGTIEDGVAMGEAMAAKLLAEAGEGFFEW 293 >gi|296162267|ref|ZP_06845062.1| porphobilinogen deaminase [Burkholderia sp. Ch1-1] gi|295887534|gb|EFG67357.1| porphobilinogen deaminase [Burkholderia sp. Ch1-1] Length = 332 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 108/304 (35%), Positives = 164/304 (53%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 12 TLVIASRESRLAMWQAEHVRCALHKLY--PSCDVKILGMTTRGDQILDRTLSKVGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G +S + RED RD +S+T SL L Sbjct: 70 VKELEAALADGRADLAVHSLKDVPMALPEGFALSTIMEREDPRDALVSNTYDSLAALPEG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL + Sbjct: 130 AVVGTSSLRREAMLRMRYPHLEVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLGER 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+ ED P+ GQGA+ IE + + ++HE T +V ER L GSC Sbjct: 190 IRALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHEHTAAAVEAERMVSRALGGSC 249 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISN 301 + +A +A L+ GIV DG+ + AI +G++ A + Sbjct: 250 EVPLAAYATWHDGALHLRGIVATPDGQRVLSAQASAPATSVEQAIALGQEVASALEQQGA 309 Query: 302 KNVF 305 + Sbjct: 310 MEIV 313 >gi|332208884|ref|XP_003253541.1| PREDICTED: porphobilinogen deaminase, partial [Nomascus leucogenys] Length = 332 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 103/304 (33%), Positives = 151/304 (49%), Gaps = 17/304 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K L Sbjct: 19 RVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 136 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFRHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 196 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 197 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 256 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCDAINI 288 L+G C +A K LY G V + DG + + +G D + Sbjct: 257 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLV 316 Query: 289 GRDA 292 G A Sbjct: 317 GITA 320 >gi|73540406|ref|YP_294926.1| porphobilinogen deaminase [Ralstonia eutropha JMP134] gi|72117819|gb|AAZ60082.1| hydroxymethylbilane synthase [Ralstonia eutropha JMP134] Length = 334 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 107/304 (35%), Positives = 161/304 (52%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R++L + P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 20 KLVIASRESRLAMWQAEYVRAALQQYY--PACDVSILGMTTRGDQILDRTLSKVGGKGLF 77 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E + G D AVHS KD+P +L G ++A + RED RD +S T SL+++ Sbjct: 78 VKELEFAMAEGRADLAVHSLKDVPMELPDGFALTAVMEREDPRDALVSSTFASLEEMPAG 137 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A L + + RG ++TRL KL+ + AI+LA AG+KRL Sbjct: 138 TVVGTSSLRREAALRARYPHLVIKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGDR 197 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ ++ E P+ GQGA+ IE P + +NH+ T +V ERA L GSC Sbjct: 198 IRALIAPEASLPAAGQGALGIEILSTRPDVAAWLSPLNHQPTALAVTAERAVSRMLGGSC 257 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIRFISN 301 + +A A G L V DG S G D A +G AA+ + Sbjct: 258 QVPLAAHARWVGDQLRLDAFVAMPDGSRQTRASAAGLVVDAAAAEALGASAARDLLSQGA 317 Query: 302 KNVF 305 + Sbjct: 318 AEIL 321 >gi|257092424|ref|YP_003166065.1| porphobilinogen deaminase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044948|gb|ACV34136.1| porphobilinogen deaminase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 315 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 103/300 (34%), Positives = 152/300 (50%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A L +++ P + I+ ++T+GD+I +R L IGGKGLF Sbjct: 11 LVIASRESRLAMWQAQHVSGRLTELY--PQTAVDILGMTTRGDQILDRPLAAIGGKGLFI 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E + G D AVHS KD+P ++ +G ++A RE+ D F+S+ L +L ++ Sbjct: 69 KELEVAMQQGRADLAVHSMKDLPMEMPEGFALAAISVRENPCDAFVSNRFGGLAELPANA 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+A+L + + RG ++TRL KL+ AI+LA AG+ RL I Sbjct: 129 VVGTSSLRREAMLRAGYPQLEIRSLRGNLDTRLRKLDAGDYDAIILAAAGLIRLGLTDRI 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 K +L E P+PGQG + IE LV +N T V ERAF L GSC+ Sbjct: 189 KAVLTPEQSLPAPGQGVLGIEVLSARVDLLTLVAPLNDVATAHCVRAERAFSRALGGSCQ 248 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A A L+ G + DG+ G D +IG AQ + + Sbjct: 249 IPLAAHAVLDSGALWLRGWIATPDGRHSLSGELRGLPEDDESIGCRLAQALHERGADAIL 308 >gi|118444575|ref|YP_878763.1| porphobilinogen deaminase [Clostridium novyi NT] gi|189028087|sp|A0Q2B1|HEM3_CLONN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|118135031|gb|ABK62075.1| porphobilinogen deaminase [Clostridium novyi NT] Length = 300 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 106/298 (35%), Positives = 159/298 (53%), Gaps = 6/298 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +G+R S LAL + K P + +STKGDRI + L +IG KGLF Sbjct: 2 KIVVGSRGSKLALTQTNWVIDKIKQ--KYPQIQFEVKIISTKGDRIQHIALDKIGDKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLAL 123 +EIE++LISG+ID AVHS KDM T++ + L+ S RED RDV I + S+ +L + Sbjct: 60 VKEIEEQLISGDIDMAVHSMKDMSTEMPEELKFSYVPKREDYRDVLILNKKYNSIDELPM 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++ IGT S RRK LL++R D++++ RG +ETR+NK+ H ++LA AGIKRL ++ Sbjct: 120 NAKIGTGSKRRKYQLLQYRDDLNIVPIRGNVETRINKIEMENLHGVVLASAGIKRLNIQE 179 Query: 184 VIKE---ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + LN + PSP QG + +E + +E++K I +++ ERAFL + Sbjct: 180 KLDYNIFYLNEDIMLPSPAQGILALEIRKDREDLEEILKSIEDKNSSIQAVAERAFLKGV 239 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +G C I + G++ DG S G DA IG + A+ + Sbjct: 240 NGGCHVPIGAICNINKDNVELTGLLGKEDGSKIIRKSLGGKIEDAEKIGYELAEIVLK 297 >gi|194212756|ref|XP_001501130.2| PREDICTED: similar to hydroxymethylbilane synthase [Equus caballus] Length = 348 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 152/337 (45%), Gaps = 48/337 (14%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K R+GTR S LA + L ++ P II +ST GD+I + L++IG K L Sbjct: 19 KVIRVGTRKSQLARIQTDSVVAMLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLET 136 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLDISPXRGNLNTRLRKLDELQEFSAIILAAAGLQRM 196 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 197 GWQNRM-------------GQGALGVEVRAKDQDILDLVGVLHDPETLLCCLAERAFLRH 243 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G + Sbjct: 244 LEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSMQETMQATIHVPAQHEDGPEDNPQLV 303 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 304 GITARNIPREAQLAAENLGISLANLLLSKGAKNILDV 340 >gi|255102624|ref|ZP_05331601.1| porphobilinogen deaminase [Clostridium difficile QCD-63q42] gi|255308450|ref|ZP_05352621.1| porphobilinogen deaminase [Clostridium difficile ATCC 43255] Length = 301 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 106/294 (36%), Positives = 158/294 (53%), Gaps = 3/294 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LAL + L K P + I + TKGD I N +L +IG KGLF Sbjct: 3 IVVGTRGSNLALIQTEWVINELKK--KYPEISFEIKIIKTKGDLIQNVSLDKIGDKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124 +EIE++L+ G+ID AVHS KDMP+ L GL+ + RED RDV I ++L DL Sbjct: 61 KEIEQQLLDGKIDIAVHSMKDMPSYLADGLKFAHTPKREDPRDVLILREGYKNLDDLPHG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +VIGT S RRK LL+ R D++++ RG +ETR+ K+ + H I+LA +GI R + Sbjct: 121 AVIGTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L ++ P+P QGA+ IE N+ + +V + E+T + ER FL ++GSC Sbjct: 181 ISSYLPVDVVIPAPAQGALAIEIRSNDSTIEGIVNSLKDENTEIQILAERGFLDGVNGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +A + ++ G+ S+GK S +G+ +G A+ + Sbjct: 241 HIPMAAYCEIIQDKIHLTGLYGDSEGKKVVIKSIDGDISSPRELGLKLAKLVLK 294 >gi|150865873|ref|XP_001385264.2| hypothetical protein PICST_47071 [Scheffersomyces stipitis CBS 6054] gi|149387129|gb|ABN67235.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 372 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 94/316 (29%), Positives = 149/316 (47%), Gaps = 17/316 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IG R S LA+ + + + + P N I+ LST GD+I N+ L GGK L+T Sbjct: 26 IQIGGRKSTLAVVQSEIVKKEIEEA--FPHINCSILALSTLGDKIQNKPLYSFGGKSLWT 83 Query: 66 EEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117 +E+E L+ ++D VHS KDMPT L ++ L RED RD + ++ Sbjct: 84 KELEILLLDSIDEFPQLDLIVHSLKDMPTNLPDEFELGCILKREDPRDALVMRAGSPYKT 143 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAG 175 L DL SV+GTSS+RR + L++ + RG ++TRL+KL++ I+LA AG Sbjct: 144 LDDLPAGSVVGTSSIRRSSQLVKNYPHLKFDSVRGNLQTRLSKLDDDSQPFECIILASAG 203 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + R+ + + LN + GQGA+ +E N+ K + ++ I+H T ER+ Sbjct: 204 LIRVGLGHRVTDYLNAPHMYYAVGQGALGVEIRKNDTKMKNILAKISHIPTSLCCYAERS 263 Query: 236 FLAELDGSCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGR 290 + L+G C I L F I+++ DG F E A +G Sbjct: 264 LMRYLEGGCSVPIGVHTNYDEDSKVLKFEAIIVSPDGTQFVEDELEAQVETLQQAEALGI 323 Query: 291 DAAQYIRFISNKNVFN 306 + K++ + Sbjct: 324 QLGDRLIAKGAKDILD 339 >gi|209965647|ref|YP_002298562.1| porphobilinogen deaminase [Rhodospirillum centenum SW] gi|209959113|gb|ACI99749.1| porphobilinogen deaminase [Rhodospirillum centenum SW] Length = 323 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 132/306 (43%), Positives = 179/306 (58%), Gaps = 3/306 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGG 60 K+P RIGTR SPLALA A ETR L + H P I I+ + T GDRI +RTL E GG Sbjct: 2 KQPLRIGTRGSPLALAQAHETRRRLAEAHPHLAEPDAIEIVVIKTTGDRILDRTLMEAGG 61 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L + ID AVHS KD+PT GLQ++A LPRED RD + L + Sbjct: 62 KGLFTKEIEEALQAETIDLAVHSMKDVPTWRQTGLQLTAMLPREDPRDAWFCRHGCGLDE 121 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT+SLRR+A +L R D+ V+ FRG ++TR+ KL + A LLA AG++RL Sbjct: 122 LPAGAVVGTASLRRQAQILARRPDLKVVPFRGNVQTRMTKLAEGQVDATLLALAGLRRLG 181 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + + + P+ QGAI IET + LV +NH +T V ER LA L Sbjct: 182 LVEHMTAAIETDVMLPAVAQGAIGIETRAADDVTNALVAALNHAETMTRVTAERGVLATL 241 Query: 241 DGSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DGSC++ IA A G +L +V+ +G+ F+ R G+ DA +G DA Q ++ Sbjct: 242 DGSCRTPIAALAELPGDGSLTLSALVIRPNGQEFYRTERRGDPDDAEAMGIDAGQELKAK 301 Query: 300 SNKNVF 305 + F Sbjct: 302 LPPDFF 307 >gi|126701044|ref|YP_001089941.1| porphobilinogen deaminase [Clostridium difficile 630] gi|122973521|sp|Q180R9|HEM3_CLOD6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|115252481|emb|CAJ70324.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Clostridium difficile] Length = 301 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 106/294 (36%), Positives = 158/294 (53%), Gaps = 3/294 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LAL + L K P + I + TKGD I N +L +IG KGLF Sbjct: 3 IVVGTRGSNLALIQTEWVINELKK--KYPEISFEIKIIKTKGDLIQNVSLDKIGDKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124 +EIE++L+ G+ID AVHS KDMP+ L GL+ + RED RDV I ++L DL Sbjct: 61 KEIEQQLLDGKIDIAVHSMKDMPSYLANGLKFAHTPKREDPRDVLILREGYKNLDDLPHG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +VIGT S RRK LL+ R D++++ RG +ETR+ K+ + H I+LA +GI R + Sbjct: 121 AVIGTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L ++ P+P QGA+ IE N+ + +V + E+T + ER FL ++GSC Sbjct: 181 ISSYLPVDVVIPAPAQGALAIEIRSNDSAIEGIVNSLKDENTEIQILAERGFLDGVNGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +A + ++ G+ S+GK S +G+ +G A+ + Sbjct: 241 HIPMAAYCEIIQDKIHLTGLYGDSEGKKVVIKSIDGDISSPRELGLKLAKLVLK 294 >gi|254977043|ref|ZP_05273515.1| porphobilinogen deaminase [Clostridium difficile QCD-66c26] gi|255094370|ref|ZP_05323848.1| porphobilinogen deaminase [Clostridium difficile CIP 107932] gi|255316123|ref|ZP_05357706.1| porphobilinogen deaminase [Clostridium difficile QCD-76w55] gi|255518784|ref|ZP_05386460.1| porphobilinogen deaminase [Clostridium difficile QCD-97b34] gi|255651962|ref|ZP_05398864.1| porphobilinogen deaminase [Clostridium difficile QCD-37x79] gi|260684926|ref|YP_003216211.1| porphobilinogen deaminase [Clostridium difficile CD196] gi|260688584|ref|YP_003219718.1| porphobilinogen deaminase [Clostridium difficile R20291] gi|306521710|ref|ZP_07408057.1| porphobilinogen deaminase [Clostridium difficile QCD-32g58] gi|260211089|emb|CBA66474.1| porphobilinogen deaminase [Clostridium difficile CD196] gi|260214601|emb|CBE07178.1| porphobilinogen deaminase [Clostridium difficile R20291] Length = 301 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 106/294 (36%), Positives = 158/294 (53%), Gaps = 3/294 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LAL + L K P + I + TKGD I N +L +IG KGLF Sbjct: 3 IVVGTRGSTLALIQTEWVINELKK--KYPEISFEIKIIKTKGDLIQNVSLDKIGDKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124 +EIE++L+ G+ID AVHS KDMP+ L GL+ + RED RDV I ++L DL Sbjct: 61 KEIEQQLLDGKIDIAVHSMKDMPSYLADGLKFAHTPKREDPRDVLILREGYKNLDDLPHG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +VIGT S RRK LL+ R D++++ RG +ETR+ K+ + H I+LA +GI R + Sbjct: 121 AVIGTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L ++ P+P QGA+ IE N+ + +V + E+T + ER FL ++GSC Sbjct: 181 ISSYLPVDVVIPAPAQGALAIEIRSNDSTIEGIVNSLKDENTEIQILAERGFLDGVNGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +A + ++ G+ S+GK S +G+ +G A+ + Sbjct: 241 HIPMAAYCEIIQDKIHLTGLYGDSEGKKVVIKSIDGDISSPRELGLKLAKLVLK 294 >gi|242015312|ref|XP_002428308.1| Porphobilinogen deaminase, putative [Pediculus humanus corporis] gi|212512893|gb|EEB15570.1| Porphobilinogen deaminase, putative [Pediculus humanus corporis] Length = 356 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 108/334 (32%), Positives = 161/334 (48%), Gaps = 36/334 (10%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++G+R S LAL+ + L + P I+ + T GD+I ++ L +IG K LFT Sbjct: 7 LKVGSRKSQLALSQTQIIVNQLKE--NFPDLKFDIVTMLTTGDKILDKPLPKIGEKSLFT 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD---LA 122 +E+E L E+D VHS KD+PT L L I A L RED RD + + + K+ L Sbjct: 65 KELEAALEKNEVDFVVHSLKDLPTSLPPNLTIGAILKREDPRDALVVNKNLNFKNVSSLP 124 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKRLKK 181 SVIGTSSLRR A L R ++ V + RG + TRL KL+ I+LA AG+KRLK Sbjct: 125 ESSVIGTSSLRRCAQLCRNYPNLKVENIRGNLNTRLKKLDEGDKYTGIVLAAAGLKRLKY 184 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I +IL + + GQGA+ +E + NN K ++++V+N T V ER+FL L Sbjct: 185 DDRITQILEPNEMLYAVGQGALAVECNKNNEKVLDILEVLNDHSTILRVIAERSFLKTLG 244 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE--VSRNGNRCDA-------------- 285 G C + +A + LY G V + +G+ + S + + Sbjct: 245 GGCSAPVAVSTKLEEKELYLTGAVWSLNGEKHIQKTKSVTISSDEPLRKKSRVMGESHAE 304 Query: 286 --------------INIGRDAAQYIRFISNKNVF 305 N+G AQ + + N+ Sbjct: 305 ITARNISNNDLNLSENLGILLAQDLIKLGALNII 338 >gi|29655352|ref|NP_821044.1| porphobilinogen deaminase [Coxiella burnetii RSA 493] gi|212213517|ref|YP_002304453.1| porphobilinogen deaminase [Coxiella burnetii CbuG_Q212] gi|39931503|sp|Q83A37|HEM3_COXBU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226706284|sp|B6J3T6|HEM3_COXB2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|29542624|gb|AAO91558.1| porphobilinogen deaminase [Coxiella burnetii RSA 493] gi|212011927|gb|ACJ19308.1| porphobilinogen deaminase [Coxiella burnetii CbuG_Q212] Length = 307 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 106/304 (34%), Positives = 160/304 (52%), Gaps = 4/304 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K+ I TR SPLAL A + + + H P I+ +T+GDR+T L + GGK Sbjct: 3 KKRSILIVTRKSPLALWQAEFVKQQIENSH--PHLACQILGCTTQGDRLTTEKLVDSGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 LF ++++K L++ + D AVHS KDM L + A++ RED RDV I L L Sbjct: 61 DLFVKDLQKALLNRDADIAVHSIKDMSACDGPELMVGAFIRREDPRDVLIVKG--ELSTL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 H+VIGTSS RR+ L +++ + + RG + TRL KL+ AI+LA AG+KRL Sbjct: 119 PPHAVIGTSSPRRQCQLKKFQPGCKIKEIRGNVGTRLAKLDAGHYEAIVLAAAGLKRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I + +F P+ GQGAI +E ++ + Q L+K ++H +T V ERA +L Sbjct: 179 ENRIHYYFDPHEFIPAIGQGAIGVECRSDDHEMQTLLKSLDHRETRLCVTAERAVNEKLG 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C + IA A K L + ++ DG++ + GN +A IG A + Sbjct: 239 GDCFTPIAAHAIIKNDQLSLFAMLGKIDGRVIIRATEIGNSEEAKRIGFKVASQLLEQGG 298 Query: 302 KNVF 305 ++ Sbjct: 299 DSLL 302 >gi|221124344|ref|XP_002162635.1| PREDICTED: similar to hydroxymethylbilane synthase a [Hydra magnipapillata] Length = 450 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 103/299 (34%), Positives = 162/299 (54%), Gaps = 8/299 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 F I TR S LAL A ++ L ++ ++ ++TKGD+I +R+L+++GGKGLF Sbjct: 150 TFTIATRESRLALWQAEHVKALLEQSGA----SVSLLGMTTKGDQILDRSLSKVGGKGLF 205 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G ++ + RED D ++S T S+ DL Sbjct: 206 VKELEVALEDGRADLAVHSLKDVPMELPDGFALACVMEREDPWDAWVSGTYASVMDLPKG 265 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR ALL R D+ + RG ++TRL KL++ I+LA AG+KRL E Sbjct: 266 AVVGTSSLRRVALLRAIRPDLKIEPLRGNLDTRLRKLDDGLYDGIVLAAAGLKRLGLESR 325 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + E P+ GQGA+ IE + ++ + H+ TW +V+ ERA + GSC Sbjct: 326 IRAVFEPEQMLPAAGQGALGIEVRAGRQDVEAALQHLVHQPTWLAVSAERAVSRMMGGSC 385 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNG---NRCDAINIGRDAAQYIRFI 299 +A +A G L+ ++G + +G + +A +G A+ ++ Sbjct: 386 SMPLAAYATISGDELHIRAAWGDAEGIQPVVYARASGLAKDAPEATALGEQVARDLQAA 444 >gi|255657374|ref|ZP_05402783.1| porphobilinogen deaminase [Clostridium difficile QCD-23m63] gi|296448968|ref|ZP_06890759.1| hydroxymethylbilane synthase [Clostridium difficile NAP08] gi|296879793|ref|ZP_06903766.1| hydroxymethylbilane synthase [Clostridium difficile NAP07] gi|296262194|gb|EFH08998.1| hydroxymethylbilane synthase [Clostridium difficile NAP08] gi|296429082|gb|EFH14956.1| hydroxymethylbilane synthase [Clostridium difficile NAP07] Length = 301 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 107/294 (36%), Positives = 159/294 (54%), Gaps = 3/294 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LAL + L K P + I + TKGD I N +L +IG KGLF Sbjct: 3 IVVGTRGSNLALIQTEWVINELKK--KYPEISFEIKIIKTKGDLIQNVSLDKIGDKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124 +EIE++L+ G+ID AVHS KDMP+ L GL+ + RED RDV I ++L DL Sbjct: 61 KEIEQQLLYGKIDIAVHSMKDMPSYLADGLKFAHTPKREDPRDVLILREGYKNLDDLPRG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +VIGT S RRK LL+ R D++++ RG +ETR+ K+ + H I+LA +GI R + Sbjct: 121 AVIGTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L ++ P+P QGA+ IE N+ K + +V + E+T + ER FL ++GSC Sbjct: 181 ISSYLPVDVVIPAPAQGALAIEIRSNDSKIEGIVNSLKDENTEIQILAERGFLDGVNGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +A + ++ G+ S+GK S +G+ +G A+ + Sbjct: 241 HIPMAAYCEIIQDKIHLTGLYGDSEGKKVVIKSIDGDISSPRELGLKLAKLVLK 294 >gi|153206963|ref|ZP_01945781.1| porphobilinogen deaminase [Coxiella burnetii 'MSU Goat Q177'] gi|154707682|ref|YP_001425472.1| porphobilinogen deaminase [Coxiella burnetii Dugway 5J108-111] gi|165918283|ref|ZP_02218369.1| porphobilinogen deaminase [Coxiella burnetii RSA 334] gi|212219568|ref|YP_002306355.1| porphobilinogen deaminase [Coxiella burnetii CbuK_Q154] gi|189028088|sp|A9KDC4|HEM3_COXBN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226706283|sp|B6J6K0|HEM3_COXB1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|120577036|gb|EAX33660.1| porphobilinogen deaminase [Coxiella burnetii 'MSU Goat Q177'] gi|154356968|gb|ABS78430.1| porphobilinogen deaminase [Coxiella burnetii Dugway 5J108-111] gi|165918143|gb|EDR36747.1| porphobilinogen deaminase [Coxiella burnetii RSA 334] gi|212013830|gb|ACJ21210.1| porphobilinogen deaminase [Coxiella burnetii CbuK_Q154] Length = 307 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 106/304 (34%), Positives = 160/304 (52%), Gaps = 4/304 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K+ I TR SPLAL A + + + H P I+ +T+GDR+T L + GGK Sbjct: 3 KKRSILIVTRKSPLALWQAEFVKQQIENSH--PHLACQILGCTTQGDRLTTEKLVDSGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 LF ++++K L++ + D AVHS KDM L + A++ RED RDV I L L Sbjct: 61 DLFVKDLQKALLNRDADIAVHSIKDMSACDGPELMVGAFIRREDPRDVLIVKG--ELSTL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 H+VIGTSS RR+ L +++ + + RG + TRL KL+ AI+LA AG+KRL Sbjct: 119 PPHAVIGTSSPRRQCQLKKFQPGCKIKEIRGNVGTRLAKLDAGHYEAIVLAAAGLKRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I + +F P+ GQGAI +E ++ + Q L+K ++H +T V ERA +L Sbjct: 179 ENRIHYYFDPHEFIPAIGQGAIGVECRSDDHEMQTLLKSLDHRETRLCVTAERAVNEKLG 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C + IA A K L + ++ DG++ + GN +A IG A + Sbjct: 239 GDCFTPIAAHAIIKNDQLSLFAMLGKIDGRVIIRATEIGNSEEAQRIGFKVASQLLEQGG 298 Query: 302 KNVF 305 ++ Sbjct: 299 DSLL 302 >gi|323525182|ref|YP_004227335.1| porphobilinogen deaminase [Burkholderia sp. CCGE1001] gi|323382184|gb|ADX54275.1| porphobilinogen deaminase [Burkholderia sp. CCGE1001] Length = 349 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 163/304 (53%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 12 TLVIASRESRLAMWQAEHVRCALHKLY--PSCDVKILGMTTRGDQILDRTLSKVGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G ++ + RED RD +S+ SL L Sbjct: 70 VKELEAALADGRADLAVHSLKDVPMELPAGFALATIMEREDPRDALVSNDYDSLAALPAG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL + Sbjct: 130 AVVGTSSLRREAMLRMRYPHLEVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAER 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+ ED P+ GQGA+ IE + + ++HE T +V ER L GSC Sbjct: 190 IRALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHEHTAAAVEAERMVSRALGGSC 249 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISN 301 + +A +A L+ G+V DG+ + A+ +GR+ A + Sbjct: 250 EVPLAAYATWHDGALHLRGVVATPDGQRVLSAHASAPAPTTERAVALGREVASALEQQGA 309 Query: 302 KNVF 305 + Sbjct: 310 MEIV 313 >gi|116690445|ref|YP_836068.1| porphobilinogen deaminase [Burkholderia cenocepacia HI2424] gi|105893551|gb|ABF76716.1| porphobilinogen deaminase [Burkholderia cenocepacia AU 1054] gi|116648534|gb|ABK09175.1| porphobilinogen deaminase [Burkholderia cenocepacia HI2424] Length = 403 Score = 335 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 165/305 (54%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 87 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 144 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 145 VKELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAG 204 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E Sbjct: 205 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 264 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC Sbjct: 265 IRALLDVEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 324 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + +A A + LY G V +DGK G DA+ +GR + + Sbjct: 325 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGA 384 Query: 302 KNVFN 306 ++ Sbjct: 385 LDIVQ 389 >gi|157164515|ref|YP_001466695.1| porphobilinogen deaminase [Campylobacter concisus 13826] gi|259647804|sp|A7ZD37|HEM3_CAMC1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|112800491|gb|EAT97835.1| porphobilinogen deaminase [Campylobacter concisus 13826] Length = 309 Score = 335 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 104/304 (34%), Positives = 158/304 (51%), Gaps = 5/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR S LAL + ++ + HK +V+ + TKGD I + L +IGGKGL Sbjct: 2 KEIKIATRKSILALWQSEHIKARIEAQHK--GMKVVLEGMKTKGDVILDTPLAKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E ++ GE D AVHS KD+P +GL+++A RED RD IS DL Sbjct: 60 FTKELEDSMLKGETDIAVHSLKDVPVVFPEGLRLAAICSREDTRDAMISEKFAKFSDLPH 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GT+SLRRK LL R D+ +I RG ++TRL KL + AI+LA AGI RL + Sbjct: 120 GAKVGTTSLRRKMQLLIMRPDLEIISLRGNVQTRLRKLKEGEFDAIILAMAGINRLNIKA 179 Query: 184 VIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I ++ P+ GQGA+ IE + + + +N E+ ER F++ L+ Sbjct: 180 EVAHIYTFGFDEMIPAMGQGALGIEAR-DEKQILDETSFLNDENAVIETTIERDFVSVLE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I A KG + IV DG + + S ++ ++G++ A Sbjct: 239 GGCQVPIGISARLKGDEISIDAIVGLPDGSEYIKDSLKTSKDKFQSVGKELAHKFIEKGA 298 Query: 302 KNVF 305 + + Sbjct: 299 RELL 302 >gi|186476930|ref|YP_001858400.1| porphobilinogen deaminase [Burkholderia phymatum STM815] gi|238058733|sp|B2JEN9|HEM3_BURP8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|184193389|gb|ACC71354.1| porphobilinogen deaminase [Burkholderia phymatum STM815] Length = 327 Score = 335 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 108/304 (35%), Positives = 165/304 (54%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLVIASRESRLAMWQAEHVRCALHKLY--PSCDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L +G +S + RED RD F+S+ SL L Sbjct: 71 VKELENALADGRADLAVHSLKDVPMELPEGFVLSTIMEREDPRDAFVSNQYDSLAALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SV+GTSSLRR+A+L ++ V RG ++TRL KL+ AI+LA AG+KRL + Sbjct: 131 SVVGTSSLRREAMLRARYPELVVKPLRGNLDTRLGKLDRGDYAAIILAAAGLKRLGLGER 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+ D P+ GQGA+ IE + ++HE T +V ER L GSC Sbjct: 191 IRSLLDPADSLPAAGQGALGIEIRAGRDDLAAWLAPLHHEHTAAAVEAERMVSRTLGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIRFISN 301 + +A +A L+ GIV DG+ + A+ +GR+ A + Sbjct: 251 EVPLAAYATWHDGALHLRGIVATPDGERVLSAQASAPAATTDAALELGREVASQLEAQGA 310 Query: 302 KNVF 305 ++ Sbjct: 311 LDIV 314 >gi|171319139|ref|ZP_02908260.1| porphobilinogen deaminase [Burkholderia ambifaria MEX-5] gi|171095659|gb|EDT40618.1| porphobilinogen deaminase [Burkholderia ambifaria MEX-5] Length = 328 Score = 335 bits (861), Expect = 4e-90, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 169/305 (55%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 71 VKELENALADGRADLAVHSLKDVPMALPDGFALTAIMEREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E Sbjct: 131 AVVGTSSLRREAMLRARYPHLDVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ ++++ED PP+ GQGA+ IE + + ++ T +V ER L GSC Sbjct: 191 IRTLIDVEDSPPAAGQGALGIEIAAHRTDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + +A A + LY G V +DG+ G DA+ +GR + + Sbjct: 251 EVPLAAHAVWRAGELYLTGRVSTTDGQRVLTAEECGAVMTVADALALGRAVSDELEAQGA 310 Query: 302 KNVFN 306 +++ N Sbjct: 311 RDIVN 315 >gi|210621716|ref|ZP_03292765.1| hypothetical protein CLOHIR_00710 [Clostridium hiranonis DSM 13275] gi|210154598|gb|EEA85604.1| hypothetical protein CLOHIR_00710 [Clostridium hiranonis DSM 13275] Length = 299 Score = 335 bits (861), Expect = 4e-90, Method: Composition-based stats. Identities = 107/296 (36%), Positives = 164/296 (55%), Gaps = 3/296 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+GTR S LAL L + K P + + TKGD+I + +L +IG KGLF Sbjct: 2 KIRVGTRGSNLALIQTNWAIDRLKE--KFPEVEFEVKIIKTKGDKILHLSLDKIGDKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLAL 123 +EIE +L+ GEID AVHS KDMP ++++GL+ +A RED RDV I S +L + Sbjct: 60 VKEIESQLLEGEIDLAVHSMKDMPAEVVEGLKFAAVPKREDPRDVIILREGLNSFDELPI 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGT S RRK LLR R D++++ RG IETR++K+ + I+LA +G+ R E+ Sbjct: 120 GATIGTGSKRRKYQLLRKRPDLNIVPIRGNIETRISKIESENLDGIVLAASGVIRADLEE 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I E L ++ P+P QGA+ +E N+ + ++++ I E + + ER++LA +DGS Sbjct: 180 KITEFLPVDLMIPAPAQGALALEIRENDEELEKMIDAIKDEISQIQTDAERSYLAGIDGS 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 C + + G L GI DG+ S G+R + +G + A+ + Sbjct: 240 CHIPMGAYCEVDGEKLTLTGIFGDEDGEKITVASLEGDRDNPKELGSNLAKLVLKK 295 >gi|172058146|ref|YP_001814606.1| porphobilinogen deaminase [Exiguobacterium sibiricum 255-15] gi|254800251|sp|B1YJV1|HEM3_EXIS2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|171990667|gb|ACB61589.1| porphobilinogen deaminase [Exiguobacterium sibiricum 255-15] Length = 308 Score = 335 bits (861), Expect = 4e-90, Method: Composition-based stats. Identities = 104/304 (34%), Positives = 163/304 (53%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LA+ L P+ I + TKGDRI + TL+++GGKGL Sbjct: 2 RKIIVGSRSSKLAMTQTKWVIEQLKQAGA--PYEFEIKNIITKGDRILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+++I +ID AVHS KD+P++L GL I A R D RD I+ T L L Sbjct: 60 FVKEIEQQMIDEDIDFAVHSMKDLPSELPTGLIIGATPSRVDARDALITTTGGGLDSLPE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +++GTSSLRR + LL+ R D+ + RG I+TRL KL ILLA AG++R+ E Sbjct: 120 GAIVGTSSLRRGSQLLKLRPDLKIESIRGNIDTRLEKLKTGPFDGILLAAAGLQRMGWSE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ E ++ +D P+ GQG + IE N+ + ++L+ +I+ + T ER+FLA ++G Sbjct: 180 DIVSEYISTDDMIPAVGQGILAIECRANDQEVRDLLNLIHDQMTEKVAFAERSFLAAIEG 239 Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC + GFA + G + + DG+ D + +G+ A + Sbjct: 240 SCHVPVGGFATINEDLSTTLVGFLGSVDGQQILLERET--SLDPMQLGQTVATRLLDAGG 297 Query: 302 KNVF 305 + + Sbjct: 298 REIL 301 >gi|330824252|ref|YP_004387555.1| Porphobilinogen deaminase [Alicycliphilus denitrificans K601] gi|329309624|gb|AEB84039.1| Porphobilinogen deaminase [Alicycliphilus denitrificans K601] Length = 309 Score = 335 bits (860), Expect = 5e-90, Method: Composition-based stats. Identities = 106/301 (35%), Positives = 157/301 (52%), Gaps = 8/301 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P I TR S LAL A ++ L H++ ++ ++T+GD+I +RTL+++GGKGLF Sbjct: 9 PIVIATRESQLALWQAEHVQALLAAR----GHSVSLLGMTTRGDQILDRTLSKVGGKGLF 64 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G ++ + RED RD F+S SL +L Sbjct: 65 VKELEVALEEGRADIAVHSLKDVPMELPDGFALACIMEREDPRDAFVSPHHASLDELPQG 124 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL + Sbjct: 125 AVVGTSSLRRQVLLQALRPDLKIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHER 184 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + P+ GQGA+ IE ++ + + HE TW +V ERA + GSC Sbjct: 185 IRSVFEPGQMLPAAGQGALGIEIRSQRQDLRDALAPLAHERTWLTVTAERAVSRAMGGSC 244 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGK----IFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +A G TL +G+ SR +A +G A +R Sbjct: 245 SMPLAAHGVWSGDTLRLQAAWGDVEGRLPLVRAEGSSRVATLDEADALGLAVAGRLRAAG 304 Query: 301 N 301 Sbjct: 305 A 305 >gi|319763492|ref|YP_004127429.1| porphobilinogen deaminase [Alicycliphilus denitrificans BC] gi|317118053|gb|ADV00542.1| porphobilinogen deaminase [Alicycliphilus denitrificans BC] Length = 309 Score = 335 bits (859), Expect = 6e-90, Method: Composition-based stats. Identities = 106/301 (35%), Positives = 157/301 (52%), Gaps = 8/301 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P I TR S LAL A ++ L H++ ++ ++T+GD+I +RTL+++GGKGLF Sbjct: 9 PIVIATRESQLALWQAEHVQALLAAR----GHSVSLLGMTTRGDQILDRTLSKVGGKGLF 64 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G ++ + RED RD F+S SL +L Sbjct: 65 VKELEVALEEGRADIAVHSLKDVPMELPDGFALACVMEREDPRDAFVSPHHASLDELPQG 124 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL + Sbjct: 125 AVVGTSSLRRQVLLQALRPDLKIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHER 184 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + P+ GQGA+ IE ++ + + HE TW +V ERA + GSC Sbjct: 185 IRSVFEPGQMLPAAGQGALGIEIRSQRQDLRDALAPLAHERTWLTVTAERAVSRAMGGSC 244 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGK----IFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +A G TL +G+ SR +A +G A +R Sbjct: 245 SMPLAAHGVWSGDTLRLQAAWGDVEGRLPLVRAEGSSRVATLDEADALGLAVAGRLRAAG 304 Query: 301 N 301 Sbjct: 305 A 305 >gi|326409887|gb|ADZ66952.1| Porphobilinogen deaminase [Brucella melitensis M28] Length = 277 Score = 335 bits (859), Expect = 6e-90, Method: Composition-based stats. Identities = 129/273 (47%), Positives = 179/273 (65%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P I I+P+ST GDRI +R L+E+GGKGLFTEEIE+ L G ID AVHS KDMPT L + Sbjct: 2 PEDAIEILPMSTAGDRIQDRPLSEVGGKGLFTEEIEQALKDGRIDIAVHSTKDMPTALPE 61 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL +S +L RED RD FI +A+ DL + +G+SSLRR+AL+ R R DI V+ +RG Sbjct: 62 GLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVGSSSLRRQALIRRLRPDIEVVMYRGN 121 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 ++TRL KL+ + LA AG++RL VI ++L+ FPP+PGQGAI IE+ + + + Sbjct: 122 VDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDVLDPSVFPPAPGQGAIGIESRIGDER 181 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 L+ + H +T ++ CERAFL LDGSC++ IAG A +G L F G++L DG+ Sbjct: 182 IDVLLAPLAHRETQIALACERAFLGALDGSCRTPIAGLATVEGDRLSFRGMILTPDGRQA 241 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 HEV+ G DA +G DAA +R ++ + F+ Sbjct: 242 HEVTAEGVVSDAAALGTDAANRVRAMAGPHFFD 274 >gi|116622285|ref|YP_824441.1| porphobilinogen deaminase [Candidatus Solibacter usitatus Ellin6076] gi|116225447|gb|ABJ84156.1| hydroxymethylbilane synthase [Candidatus Solibacter usitatus Ellin6076] Length = 297 Score = 335 bits (859), Expect = 6e-90, Method: Composition-based stats. Identities = 115/301 (38%), Positives = 154/301 (51%), Gaps = 11/301 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LAL A + L H I + T GD+IT+ L ++G KGLFT Sbjct: 2 LVIASRGSQLALWQAHWVEAQLQAA----GHECRIEIIKTTGDKITDVPLAKVGTKGLFT 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G AVHS KD+PT+L +GL + A RED RD I ++L +L L + Sbjct: 58 KEIEEALLDGRAQLAVHSLKDLPTELPEGLVLGAVPKREDPRDAVI---GKTLAELPLGA 114 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR A L R R D+ V RG ++TRL KL+ + AILLA AG+KRL I Sbjct: 115 KVGTSSLRRSAQLKRLRPDLVVESIRGNLDTRLRKLDEGQYDAILLAAAGMKRLGWGARI 174 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 EIL + P+ GQGA+ IET L V+NH DT +V ER L L G C+ Sbjct: 175 AEILPPDLMCPAVGQGALAIETRAGFV----LPAVLNHADTHTAVLAERGLLGALGGGCQ 230 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 I A G + G+V A DG G +A IG+ + + + Sbjct: 231 VPIGAHATVAGGRVRLLGLVAAPDGSEIVRAEAEGASGEAAEIGKRLGAELLARGARRIL 290 Query: 306 N 306 + Sbjct: 291 D 291 >gi|332527780|ref|ZP_08403819.1| porphobilinogen deaminase [Rubrivivax benzoatilyticus JA2] gi|332112176|gb|EGJ12152.1| porphobilinogen deaminase [Rubrivivax benzoatilyticus JA2] Length = 309 Score = 334 bits (858), Expect = 7e-90, Method: Composition-based stats. Identities = 103/310 (33%), Positives = 152/310 (49%), Gaps = 9/310 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M I TR S LAL A R L + ++ ++TKGD+I +R L+++GG Sbjct: 1 MSSNTI-IATRESRLALWQAEHVRDVLTARF---GLAVELLGMTTKGDQILDRALSKVGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L G AVHS KD+P L G ++A RED RD ++S+ ++L Sbjct: 57 KGLFVKELETALEEGRAHLAVHSLKDVPMDLPPGFALAAIWEREDPRDAWVSNQYENLDA 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR LL R D+ + RG ++TRL KL+ AI+LA AG+KRL Sbjct: 117 LPQGACVGTSSLRRVVQLLARRPDLKIEPLRGNLDTRLRKLDEGGYDAIVLAAAGLKRLG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ + + P+ GQGA+ IE ++ + +EL+ H T+ + + ERA L Sbjct: 177 LGARIRSLFDTSVMIPAAGQGALGIEIREDDTRLKELLAQTLHLPTFLACHAERAVSRSL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVL--ASDGKIFHEVSRNGNRCD---AINIGRDAAQY 295 GSC +A F L + + +V G D A +G AA Sbjct: 237 GGSCSMPLAAFGQWNDGVLTIDAALGHSTELTRPLIKVRVTGTPTDEASARALGEHAAAL 296 Query: 296 IRFISNKNVF 305 +R + Sbjct: 297 LREAGAGDYL 306 >gi|71899004|ref|ZP_00681170.1| Porphobilinogen deaminase [Xylella fastidiosa Ann-1] gi|71731250|gb|EAO33315.1| Porphobilinogen deaminase [Xylella fastidiosa Ann-1] Length = 305 Score = 334 bits (858), Expect = 7e-90, Method: Composition-based stats. Identities = 101/300 (33%), Positives = 158/300 (52%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LA+ + + L + P ++V++P+ST+GD I +R+L IGGKGLF Sbjct: 4 LRIATRKSLLAMWQSEYVAARLRML--CPDLDVVLVPMSTRGDEILDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ G+ DCAVHS KD+P L ++A L R+D D IS+ SL+ L + + Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 + TSSLRR+A L +R D+ + D RG + TRL KL+N AI+LA AG++RL E+ + Sbjct: 122 RVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNGDYDAIVLACAGLRRLGLEQRM 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L ++ P+PGQGAI +E+ + + L+ ++ T V ER L GSC Sbjct: 182 TARLAPPEWLPAPGQGAIAVESLTEDARIATLLAGLDDLPTRQCVVAERTMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + +A + + G+V + + +GR AQ + + Sbjct: 242 VPVGAYASYEVGGMRLQGLVGCVADGRLVRAELCSAKDEGDMLGRAVAQCLLDAGAAELL 301 >gi|156846242|ref|XP_001646009.1| hypothetical protein Kpol_1031p58 [Vanderwaltozyma polyspora DSM 70294] gi|156116680|gb|EDO18151.1| hypothetical protein Kpol_1031p58 [Vanderwaltozyma polyspora DSM 70294] Length = 327 Score = 334 bits (858), Expect = 7e-90, Method: Composition-based stats. Identities = 98/321 (30%), Positives = 153/321 (47%), Gaps = 17/321 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K+ IG R S LA+A + + + + + + P + I+ L T GD+I ++ L GG Sbjct: 1 MSKEVLVIGGRSSKLAVAQSTKVKELIEE--QFPQYECRIVALKTLGDQIQSKPLYSFGG 58 Query: 61 KGLFTEEIEKKLI----SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH--- 113 K ++T+E+E L ID VHS KD+PT L G +I A R D D + Sbjct: 59 KAVWTKELEDLLYHEDAKERIDLIVHSLKDVPTLLPDGFEIGAITKRVDPSDCLVMPIDS 118 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILL 171 +SL DL S++GTSS+RR A L R + RG I TRL K+++ + I+L Sbjct: 119 KYKSLDDLPNGSIVGTSSIRRSAQLKRRYPHLKFESVRGNIHTRLKKVDDPESHYQCIIL 178 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ R+ E I + N + GQGA+ IE + K + ++ I+ E+T Sbjct: 179 AAAGLIRMGLESRITQTFNSTMMYHAVGQGAMGIEIREGDEKLRNILSKISDEETTVCCL 238 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVS----RNGNRCDA 285 ER+ + L+G C I S L GIV+ DG E ++ D+ Sbjct: 239 AERSLMRTLEGGCSVPIGVETKYDASKKELLLKGIVVDVDGTKAIEEQHSIIIQDSKEDS 298 Query: 286 INIGRDAAQYIRFISNKNVFN 306 + G+ A+ ++ K + + Sbjct: 299 MACGKALAEKMKQAGAKTILD 319 >gi|254488942|ref|ZP_05102147.1| porphobilinogen deaminase [Roseobacter sp. GAI101] gi|214045811|gb|EEB86449.1| porphobilinogen deaminase [Roseobacter sp. GAI101] Length = 297 Score = 334 bits (858), Expect = 7e-90, Method: Composition-based stats. Identities = 123/291 (42%), Positives = 165/291 (56%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 +A A ETR+ L +P I+ + GD I +R L EIGGKGLFT EIE+ L++G+ Sbjct: 1 MAQAVETRARLSAAFDLPLTAFEIVVIKVTGDMIQDRPLKEIGGKGLFTREIEEDLLAGK 60 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 ID AVHS KDMPT GL + YLPRED RD F++ +L L +V+GTSSLRR+A Sbjct: 61 IDIAVHSMKDMPTVQPGGLLLDTYLPREDPRDAFVAPLMSALDQLTEGAVVGTSSLRRRA 120 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 LL R D+ V++FRG ++TRL KL + A LA AG+ RL E V ++ D P Sbjct: 121 QLLHKRPDLQVVEFRGNVQTRLRKLADGVAECTFLAMAGLNRLGMENVPATPIDDTDMLP 180 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + QGAI IE + + L+ I+ T + ERAFL LDGSC++ IAG A G Sbjct: 181 AVAQGAIGIERRAGDLDTEALLAAIHDTPTGQRLIAERAFLLTLDGSCETPIAGLATLDG 240 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307 TL+ G VL DG R+G D +G D A+ + + N F++ Sbjct: 241 DTLHLRGEVLRPDGSEVISGDRSGPIGDGGQMGVDLARELLSQAGPNFFDW 291 >gi|161831110|ref|YP_001595911.1| porphobilinogen deaminase [Coxiella burnetii RSA 331] gi|189028089|sp|A9N910|HEM3_COXBR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|161762977|gb|ABX78619.1| porphobilinogen deaminase [Coxiella burnetii RSA 331] Length = 307 Score = 334 bits (858), Expect = 8e-90, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 159/304 (52%), Gaps = 4/304 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K+ I TR SPLAL A + + + H P I+ +T+GDR+T L + GGK Sbjct: 3 KKRSILIVTRKSPLALWQAEFVKQQIENSH--PHLACQILGCTTQGDRLTTEKLVDSGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 LF ++++K L++ + D AVHS KDM L + A++ RED RDV I L L Sbjct: 61 DLFVKDLQKALLNRDADIAVHSIKDMSACDGPELMVGAFIRREDPRDVLIVKG--ELSTL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 H+VIGTSS RR+ L +++ + + RG + TRL KL+ AI+LA AG+KRL Sbjct: 119 PPHAVIGTSSPRRQCQLKKFQPGCKIKEIRGNVGTRLAKLDAGHYEAIVLAAAGLKRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I + +F P+ GQGAI +E ++ + Q L+K ++H +T V ERA +L Sbjct: 179 ENRIHYYFDPHEFIPAIGQGAIGVECRSDDHEMQTLLKSLDHRETRLCVTAERAVNEKLG 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C + IA A K + ++ DG++ + GN +A IG A + Sbjct: 239 GDCFTPIAAHAIIKNDQFSLFAMLGKIDGRVIIRATEIGNSEEAKRIGFKVASQLLEQGG 298 Query: 302 KNVF 305 ++ Sbjct: 299 DSLL 302 >gi|260220724|emb|CBA28572.1| Porphobilinogen deaminase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 312 Score = 334 bits (858), Expect = 8e-90, Method: Composition-based stats. Identities = 103/299 (34%), Positives = 162/299 (54%), Gaps = 8/299 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 F I TR S LAL A ++ L ++ ++ ++TKGD+I +R+L+++GGKGLF Sbjct: 12 TFTIATRESRLALWQAEHVKALLEQSGA----SVSLLGMTTKGDQILDRSLSKVGGKGLF 67 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G ++ + RED D ++S T S+ DL Sbjct: 68 VKELEVALEDGRADLAVHSLKDVPMELPDGFALACVMEREDPWDAWVSGTYASVMDLPKG 127 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR ALL R D+ + RG ++TRL KL++ I+LA AG+KRL E Sbjct: 128 AVVGTSSLRRVALLRAIRPDLKIEPLRGNLDTRLRKLDDGLYDGIVLAAAGLKRLGLESR 187 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + E P+ GQGA+ IE + ++ + H+ TW +V+ ERA + GSC Sbjct: 188 IRAVFEPEQMLPAAGQGALGIEVRAGRQDVEAALQHLVHQPTWLAVSAERAVSRMMGGSC 247 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNG---NRCDAINIGRDAAQYIRFI 299 +A +A G L+ ++G + +G + +A +G A+ ++ Sbjct: 248 SMPLAAYATISGDELHIRAAWGDAEGIQPVVYARASGLAKDAPEATALGEQVARDLQAA 306 >gi|94984201|ref|YP_603565.1| porphobilinogen deaminase [Deinococcus geothermalis DSM 11300] gi|123257361|sp|Q1J288|HEM3_DEIGD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|94554482|gb|ABF44396.1| porphobilinogen deaminase [Deinococcus geothermalis DSM 11300] Length = 309 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 108/306 (35%), Positives = 164/306 (53%), Gaps = 5/306 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITN--RTLTEIGGK 61 + +GTR S LALA + L + + P + I +STKGDR ++L + G K Sbjct: 2 RTVTVGTRGSALALAQTRWVVARLKE--EWPDTDFRIQTISTKGDRDRAALQSLAQKGDK 59 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKD 120 G + +EIE L++G ID AVHS KD+PT+ +GL+I++ R D RDV I + L+D Sbjct: 60 GFWVKEIEDALLAGRIDIAVHSLKDLPTEQPEGLEIASIPKRVDARDVLIGKDGMKRLED 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSS+RRKA L +R D+ ++D RG I+TRL L AI+LA AG+ R + Sbjct: 120 LPSGARVGTSSVRRKAFLRAYRPDLQILDLRGNIDTRLAALGTPDYDAIVLAAAGLIRTE 179 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E ++ + P+PGQGA+ +ET ++ + E+V I+ T D V ER FLA L Sbjct: 180 MRHRIDEFIDPDLLLPAPGQGALALETRADDDLSIEVVYAIHDHATDDRVTAEREFLAGL 239 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C + + A K L G V A DG + +G+ + ++G + A + Sbjct: 240 GAGCMAPVGAHATLKDGVLTLEGWVGALDGSQVIRATTSGDPAECADLGAELAADMLGQG 299 Query: 301 NKNVFN 306 + + Sbjct: 300 AQQLIE 305 >gi|300312229|ref|YP_003776321.1| porphobilinogen deaminase [Herbaspirillum seropedicae SmR1] gi|300075014|gb|ADJ64413.1| porphobilinogen deaminase protein [Herbaspirillum seropedicae SmR1] Length = 318 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 97/300 (32%), Positives = 153/300 (51%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A R L ++ P +I I+ +T+GD+I +R L+++GGKGLF Sbjct: 9 IVIVSRESRLAMWQAEYVRDRLAALY--PQCSISILGTTTRGDQILDRALSKVGGKGLFV 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E + G D AVH KDMP L +G +++A L RED RD F+S+ +L +L + Sbjct: 67 KELEVAMAEGRADLAVHCLKDMPMDLPEGFELAAILEREDPRDAFVSNDYAALDELPDGA 126 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+A++ + V RG ++TRL KL+ AI+LA AG+ RL + I Sbjct: 127 VVGTSSLRRQAMIAARYPQLVVKPLRGNLDTRLAKLDRGDYAAIILAVAGLNRLGLKARI 186 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L+ PSPGQG + IE + L+ ++ E ER+ SC+ Sbjct: 187 RSFLDPAQSLPSPGQGTLAIEIPEGREDIKRLLAPLHDEPAAVVSAAERSVSRIFGASCQ 246 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A +A G L+ ++ DG G +G A+ ++ ++ Sbjct: 247 IPLAAYATLDGQRLHLRAMIATPDGLHAAAAEAEGPAAAPEALGAQVAELLKARGADDIL 306 >gi|160897675|ref|YP_001563257.1| porphobilinogen deaminase [Delftia acidovorans SPH-1] gi|160363259|gb|ABX34872.1| porphobilinogen deaminase [Delftia acidovorans SPH-1] Length = 312 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 103/299 (34%), Positives = 153/299 (51%), Gaps = 13/299 (4%) Query: 1 MEKKP-----FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL 55 M KP I TR S LAL A ++ L H + ++ ++TKGD+I +RTL Sbjct: 1 MNTKPLLPHSIVIATRESQLALWQAEHVQALLRAR----GHEVELLGMTTKGDQILDRTL 56 Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115 +++GGKGLF +E+E L G AVHS KD+P +L +G ++ + RED RD F+S+ Sbjct: 57 SKVGGKGLFVKELEVALEEGRAHIAVHSLKDVPMELPEGFVLACVMEREDPRDAFVSNRY 116 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 +L +L +V+GTSSLRR+ALL R D+ + RG + TRL KL+ AI+LA AG Sbjct: 117 ATLAELPQGAVVGTSSLRRQALLQALRPDLKIEPLRGNVNTRLRKLDEGHYDAIVLAAAG 176 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + RL I+ P+ GQGA+ IE + + + + H+ TW +V ERA Sbjct: 177 LMRLGLADRIRARFEPTGMLPAAGQGALGIEVRADRQDLIDALAPLAHQTTWLTVTAERA 236 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNRCD---AINIGR 290 + GSC +A G L G++ +V + D A +G+ Sbjct: 237 VSRCMGGSCSMPLAAHGTFDGRQLRLDAAWGDPQGRLPLVQVHADATVTDFASADALGQ 295 >gi|307720830|ref|YP_003891970.1| hydroxymethylbilane synthase [Sulfurimonas autotrophica DSM 16294] gi|306978923|gb|ADN08958.1| hydroxymethylbilane synthase [Sulfurimonas autotrophica DSM 16294] Length = 319 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 103/304 (33%), Positives = 169/304 (55%), Gaps = 4/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL A+ + + + P +V+ + + GD++ ++ L IGGKG Sbjct: 2 KKLTIATRVSDLALWQAYHIKERVEVNY--PEIEVVLNKIVSNGDKVLDKPLALIGGKGH 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E ++++G + AVHS KD+PT + GL++ A R+D DVF+SHT +L DL Sbjct: 60 FTKELEDEMLAGNAELAVHSLKDVPTYIPDGLELVAVTQRQDQSDVFLSHTYATLDDLPK 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GT+SLRR+ LL+ R D+ V D RG + TRL KL + AI+LA+ G+ RL K Sbjct: 120 GAVVGTTSLRRRMQLLQKRPDLKVKDLRGNVNTRLRKLKEGQYDAIILAWIGLNRLDLLK 179 Query: 184 --VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + L+++ P GQ A+ IE +N K +E+ K +N EDT+ ER F++++ Sbjct: 180 DIPYTQKLSLDMMIPPMGQAALGIEIISDNEKVREIAKSLNDEDTFTCTQIERDFISKIG 239 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C + +A A G + F ++ DG + ++ ++ N+G++ AQ + Sbjct: 240 AGCSAPVACNAVIDGDNVVFRTMIGFPDGTNIMQKKVVKSKNESENLGKELAQKMINNGA 299 Query: 302 KNVF 305 + Sbjct: 300 LKLL 303 >gi|229117967|ref|ZP_04247327.1| Porphobilinogen deaminase [Bacillus cereus Rock1-3] gi|228665416|gb|EEL20898.1| Porphobilinogen deaminase [Bacillus cereus Rock1-3] Length = 295 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 109/291 (37%), Positives = 156/291 (53%), Gaps = 6/291 (2%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + L + P+ + + TKGD I + TL+++GGKGLF +EIE L+ E Sbjct: 1 MTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGLFVKEIEHALLMKE 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 ID AVHS KDMP L +GL I R D RD FIS + S KDLA +++GTSSLRR A Sbjct: 59 IDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKDLAEGAILGTSSLRRSA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-VIKEILNIEDFP 195 LL R D+ V RG I+TRL KL AI+LA AG++R+ + VI E L+ Sbjct: 119 QLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEVITEHLDETLCV 178 Query: 196 PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC- 254 P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C+ IAG+A Sbjct: 179 PAVGQGALAIECRKDDNDLLQLLSHMNDAVTERTVAAERVFLHKLEGGCQVPIAGYATLT 238 Query: 255 KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 K + +V + DG + + + G + +G +AA + K + Sbjct: 239 KDDAIELTALVGSMDGSVLLKETVVG--VEPKEVGLEAADLLIKQGAKELI 287 >gi|15838228|ref|NP_298916.1| porphobilinogen deaminase [Xylella fastidiosa 9a5c] gi|11386846|sp|Q9PCX7|HEM3_XYLFA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|9106679|gb|AAF84436.1|AE003989_13 hydroxymethylbilane synthase [Xylella fastidiosa 9a5c] Length = 305 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 101/300 (33%), Positives = 158/300 (52%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LA+ + + L + P ++V++P+ST+GD I +R+L IGGKGLF Sbjct: 4 LRIATRKSLLAMWQSEYVAARLRMLR--PDLDVVLVPMSTRGDEILDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ G+ DCAVHS KD+P L ++A L R+D D IS+ SL+ L + + Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 + TSSLRR+A L +R D+ + D RG + TRL KL+N AI+LA AG++RL E+ + Sbjct: 122 RVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNGDYDAIVLACAGLRRLGLEQRM 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L ++ P+PGQGAI +E+ + + L+ ++ T V ER L GSC Sbjct: 182 TARLAPPEWLPAPGQGAIAVESLTEDARIGTLLAGLDDLPTRQCVVAERTMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + +A + + G+V + + +GR AQ + + Sbjct: 242 VPVGAYASYEVGGMRLQGLVGCVADGRLVRAELCSAKDEGDMLGRAVAQCLLDAGAAELL 301 >gi|327290907|ref|XP_003230163.1| PREDICTED: porphobilinogen deaminase-like, partial [Anolis carolinensis] Length = 351 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 103/291 (35%), Positives = 146/291 (50%), Gaps = 6/291 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 ++ + R+GTR S LA L H P + II ++T GD+I + L++IG Sbjct: 7 LKNQTIRVGTRKSQLARIQTDSVVEMLQKHH--PQLHFEIIGMTTTGDKILDTALSKIGE 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117 K LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++ Sbjct: 65 KSLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPHDAVVFHPKHVGKT 124 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGI 176 L L SVIGTSSLRR A L R + D RG + TRL KL+ AI+LA AG+ Sbjct: 125 LSSLPDKSVIGTSSLRRAAQLKRAFPQLQFKDIRGNLNTRLKKLDEKDDFSAIVLATAGL 184 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 +R+ E I +IL + + GQGA+ +E + + E+V V++ +T ERAF Sbjct: 185 RRMGWEDRIGQILTPMECLYAVGQGALAVEVRARDQEILEMVSVLHDGETVLRCIAERAF 244 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 + L+G C +A K S LY G V + DG + N + Sbjct: 245 MKHLEGGCSVPVAVSTTLKDSQLYLTGAVYSLDGSESLCETMQTNVKFPME 295 >gi|28199044|ref|NP_779358.1| porphobilinogen deaminase [Xylella fastidiosa Temecula1] gi|182681767|ref|YP_001829927.1| porphobilinogen deaminase [Xylella fastidiosa M23] gi|32129567|sp|Q87CC9|HEM3_XYLFT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238059005|sp|B2I5K8|HEM3_XYLF2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|28057142|gb|AAO29007.1| hydroxymethylbilane synthase [Xylella fastidiosa Temecula1] gi|182631877|gb|ACB92653.1| porphobilinogen deaminase [Xylella fastidiosa M23] gi|307580196|gb|ADN64165.1| porphobilinogen deaminase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 305 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 101/300 (33%), Positives = 158/300 (52%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LA+ + + L + P ++V++P+ST+GD I +R+L IGGKGLF Sbjct: 4 LRIATRKSLLAMWQSEYVAARLRML--CPDLDVVLVPMSTRGDEILDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ G+ DCAVHS KD+P L ++A L R+D D IS+ SL+ L + + Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 + TSSLRR+A L +R D+ + D RG + TRL KL+N AI+LA AG++RL E+ + Sbjct: 122 RVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNGDYDAIVLACAGLRRLGLEQRM 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L ++ P+PGQGAI +E+ + + L+ ++ T V ER L GSC Sbjct: 182 TARLAPPEWLPAPGQGAIAVESLTEDARIGTLLAGLDDLPTRKCVIAERTMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + +A + + G+V + + +GR AQ + + Sbjct: 242 VPVGAYASYEVGGMRLQGLVGCVADGRLVRAELCSAKDEGDMLGRAVAQCLLDAGAAELL 301 >gi|187929644|ref|YP_001900131.1| porphobilinogen deaminase [Ralstonia pickettii 12J] gi|309781590|ref|ZP_07676324.1| hydroxymethylbilane synthase [Ralstonia sp. 5_7_47FAA] gi|187726534|gb|ACD27699.1| porphobilinogen deaminase [Ralstonia pickettii 12J] gi|308919565|gb|EFP65228.1| hydroxymethylbilane synthase [Ralstonia sp. 5_7_47FAA] Length = 338 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 160/305 (52%), Gaps = 6/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LAL A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF Sbjct: 25 KLVIASRESRLALWQAEHVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLF 82 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L +G +SA L RED RD FIS+ L L Sbjct: 83 VKELEVALAEGRADLAVHSLKDVPMELPEGFALSAILEREDPRDAFISNDYADLASLPAG 142 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A L + + RG ++TRL KL+ AI+LA AG+KRL Sbjct: 143 AVVGTSSLRREASLRARFPHLVIQPLRGNLDTRLGKLDRGDYAAIILAAAGLKRLGLVDR 202 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + E+ P+ GQGA+ IE + + + ++ E T +V ERA L GSC Sbjct: 203 IRSTIAPEESLPAAGQGALGIEIRADRADVRACLAPLHDEPTALAVTAERAVSRILGGSC 262 Query: 245 KSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFIS 300 + +A FA G TL V + DG +A +G AQ + Sbjct: 263 QVPLASFAQWSDGGTLRLRAFVASQDGTRKLAADGEATPSTLAEADALGVRVAQQMLAGG 322 Query: 301 NKNVF 305 +++ Sbjct: 323 ARDIL 327 >gi|241663752|ref|YP_002982112.1| porphobilinogen deaminase [Ralstonia pickettii 12D] gi|240865779|gb|ACS63440.1| porphobilinogen deaminase [Ralstonia pickettii 12D] Length = 338 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 105/307 (34%), Positives = 160/307 (52%), Gaps = 6/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LAL A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF Sbjct: 25 KLVIASRESRLALWQAEHVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLF 82 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L +G +S L RED RD F+S+ L L Sbjct: 83 VKELEVALAEGRADLAVHSLKDVPMQLPEGFALSTILEREDPRDAFVSNDYADLASLPAG 142 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A L + + RG ++TRL KL+ AI+LA AG++RL Sbjct: 143 AVVGTSSLRREASLRARFPHLVIQPLRGNLDTRLGKLDRGDYAAIILAAAGLRRLGLADR 202 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + E+ P+ GQGA+ IE + + + + ++ T +V ERA L GSC Sbjct: 203 IRSTIAPEESLPAAGQGALGIEIRADREEVRACLAPLHDAPTALAVTAERAVSRILGGSC 262 Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFIS 300 + +A FA G TL V + DG DA +G AQ + Sbjct: 263 QVPLAAFAQWSGAGTLRLRAFVASQDGTRKLAADGEATPSTLADADALGVRVAQQMLAGG 322 Query: 301 NKNVFNF 307 +++ + Sbjct: 323 ARDILSM 329 >gi|198284968|ref|YP_002221289.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666388|ref|YP_002427653.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC 23270] gi|226740625|sp|B7JBH8|HEM3_ACIF2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226740626|sp|B5ERN6|HEM3_ACIF5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|198249489|gb|ACH85082.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518601|gb|ACK79187.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 306 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 108/285 (37%), Positives = 158/285 (55%), Gaps = 4/285 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLA+ A R++L+ +H P + II ++T GD + + L +GGKGLF Sbjct: 5 LRIGTRASPLAVWQAEHVRAALLRLH--PGMAVEIITMTTSGDVLLDAPLHALGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L +D AVHS KD+P GL+I A + RED+RD F+S+T L + Sbjct: 63 KEIEDALQQRRVDVAVHSMKDVPALQPDGLEIVAIMAREDVRDAFVSNTFLHPDALPEGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G+SSLRR+A LL + V D RG + TRL +L+ AI+LA AG+KRL I Sbjct: 123 RVGSSSLRRRAQLLERYPHLRVEDLRGNVATRLRRLDEGHYDAIILAAAGLKRLGLPDRI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +L+I+ P+ GQGAI IE ++ + +EL+ + DT + V ER+ L G C+ Sbjct: 183 THLLDIDRSLPAVGQGAIGIEARSDDRRTRELLAPLADADTQNCVLAERSMNQVLGGDCR 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 +A A +G + G+V DG+ G+ D + +G Sbjct: 243 LPVAALARWQGPQMLLRGLVATPDGRRVLHAEAKGS--DPVALGM 285 >gi|56685543|dbj|BAD78765.1| hydroxymethylbilane synthase [Synechococcus elongatus PCC 6301] Length = 300 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 99/291 (34%), Positives = 148/291 (50%), Gaps = 5/291 (1%) Query: 19 HAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEID 78 + L ++ P + +ST+GD I + L +IG KGLFT+E+E +++GE+D Sbjct: 2 QTHWVQGELQRLY--PDRQFDVQTMSTQGDIILDVALAKIGDKGLFTKELEVAMLAGEVD 59 Query: 79 CAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRK 135 AVHS KD+PT+L +GL + RED D + H L+ L +VIGTSSLRR Sbjct: 60 FAVHSLKDLPTRLPEGLILGCVTEREDPADALVVHDRFKDHQLETLPEGTVIGTSSLRRL 119 Query: 136 ALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFP 195 A L + D RG + TRL KL+ + A++LA AG++RL I +++ Sbjct: 120 AQLRHHYPHLQFKDVRGNLNTRLAKLDAGEYDALILAAAGLQRLSMADRIHQLIPAAVSL 179 Query: 196 PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK 255 + GQGA+ IE +P+ EL+K + HE T ERAFL EL+G C+ I Sbjct: 180 HAVGQGALGIECRAEDPEILELLKALEHEPTSQRCLAERAFLRELEGGCQVPIGVNTAIA 239 Query: 256 GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 TL G+V + DG+ +G D +G A ++ K + + Sbjct: 240 DGTLTLTGMVASLDGQRLLRDQVSGPTSDPEALGLALAAQLKAQGAKEILD 290 >gi|115352519|ref|YP_774358.1| porphobilinogen deaminase [Burkholderia ambifaria AMMD] gi|122322497|sp|Q0BCU9|HEM3_BURCM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|115282507|gb|ABI88024.1| porphobilinogen deaminase [Burkholderia ambifaria AMMD] Length = 328 Score = 332 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 71 VKELENALADGRADLAVHSLKDVPMALPDGFALTAIMEREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E Sbjct: 131 AVVGTSSLRREAMLRARYPHLDVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ ++++ED PP+ GQGA+ IE + + ++ T +V ER L GSC Sbjct: 191 IRTLIDVEDSPPAAGQGALGIEIATHRTDVAAWLAPLHDPRTALAVEAERMVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + +A A + LY G V +DG+ G DA+ +GR + + Sbjct: 251 EVPLAAHAVWRAGELYLTGRVSTTDGQRVLTAEECGAVMTVADALALGRAVSDELEAQGA 310 Query: 302 KNVFN 306 ++ N Sbjct: 311 LDIVN 315 >gi|291277466|ref|YP_003517238.1| porphobilinogen deaminase [Helicobacter mustelae 12198] gi|290964660|emb|CBG40515.1| porphobilinogen deaminase [Helicobacter mustelae 12198] Length = 315 Score = 332 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 105/311 (33%), Positives = 156/311 (50%), Gaps = 9/311 (2%) Query: 1 MEK--KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M K + IGTR S LAL A L + + T+GDR+ + L +I Sbjct: 1 MSKQNRQIIIGTRGSALALWQAEYIAMRLKKEL---GIESRLQIVKTQGDRMLDVPLAKI 57 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLFT+E+EK L+ +ID AVHS KD+P + ++GL ++ RED+RD F+S S+ Sbjct: 58 GGKGLFTKELEKLLLQEKIDIAVHSLKDVPVEFVEGLDLACITKREDVRDCFLSVRYASI 117 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 DL + +GT+SLRR L R D+ RG ++TRL +L + + AI+LA AG+ R Sbjct: 118 LDLPPGARVGTTSLRRSMQLKILRKDLDTQSLRGNVQTRLKRLFDGEFDAIILAQAGLNR 177 Query: 179 LKKEKVIKEILNI---EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 L ++ L E+ P+ GQGA+ IE + L++ +N E T N ER Sbjct: 178 LGIDQQKVPFLKPFSTEELIPAMGQGALGIEAREGDG-IFSLLQGLNDEATAICTNAERT 236 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 F+ LDG C+ I A C + I+ DG S +G+ D+I + + A+ Sbjct: 237 FIRVLDGGCQVPIGVHAQCNNQDFVIHAILGLPDGSKVLRDSISGSTKDSILLAENLAER 296 Query: 296 IRFISNKNVFN 306 + Sbjct: 297 FLSQGALEILE 307 >gi|258511805|ref|YP_003185239.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478531|gb|ACV58850.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 305 Score = 332 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 113/302 (37%), Positives = 160/302 (52%), Gaps = 4/302 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+ TR S LAL L V ++P+ T+GD I +R L+E+GGKGL Sbjct: 2 RTLRVATRRSALALTQTNHVVDLLKQVAH--GVEFELVPIRTRGDEIVDRALSEVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +IE L +G+ D AVHS KD+P +L GL I A PRED RD IS T Q L DL Sbjct: 60 FVADIEDALATGQADLAVHSLKDVPFELRDGLTIGAVPPREDPRDALISRTGQGLFDLPP 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRR+A L R R D+ V RG ++TRL +L + AI+LA +G+ RL + Sbjct: 120 GARVGTSSLRRQAALRRLRPDLCVETLRGNVDTRLRRLEEGQFDAIVLAASGLHRLGLAE 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I E L ++ F P+ GQGA+ IE + + + I D +V ERAFL+ L+GS Sbjct: 180 RITEYLPVDRFVPAVGQGALAIECRAEDDEVMRHLAAIADPDATRAVEAERAFLSRLEGS 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I +A G L V G ++ R G+ +A +G A+ + ++ Sbjct: 240 CQVPIGAYAEPVGHELRLIAFVADPSGIHHLQLERTGD--EARALGVAMAEEMLRQGAED 297 Query: 304 VF 305 Sbjct: 298 WL 299 >gi|297183175|gb|ADI19316.1| porphobilinogen deaminase [uncultured delta proteobacterium HF0500_03A04] Length = 315 Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats. Identities = 108/302 (35%), Positives = 157/302 (51%), Gaps = 4/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LAL A +S + H P + ++ + TKGDRI +R L+++GGKGLF Sbjct: 5 LRIATRGSRLALWQANWVKSQIEQNH--PGQTVELVIVQTKGDRIQDRPLSQVGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L D AVHS KD+ ++ +GL + RED RD ++ S +L + Sbjct: 63 KELEGSLFREAADLAVHSLKDVTGEVPEGLALPVVTAREDFRDALVAPRHGSFCELPSGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR A LL R D+ RG +ETRLNK+++ A LLA AG+KRL+ E I Sbjct: 123 VVGTSSLRRAAQLLHLRPDLETQPIRGNVETRLNKVDSGAFDATLLAVAGLKRLELELRI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+ E P+ GQG + +E ++P EL++ + + T ER L L+G+C+ Sbjct: 183 TEVFPPEMLLPALGQGVLGLEIRADDPATLELIQPLQDKTTALCCQAERRLLERLEGNCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHE--VSRNGNRCDAINIGRDAAQYIRFISNKN 303 +AG G L G +LA DG+ E A +G + A I + Sbjct: 243 VPLAGLCERCGERLLLRGQLLAPDGQQVVEHKAESAATPEAARALGDEVANAILNSGGRE 302 Query: 304 VF 305 + Sbjct: 303 IL 304 >gi|283780135|ref|YP_003370890.1| porphobilinogen deaminase [Pirellula staleyi DSM 6068] gi|283438588|gb|ADB17030.1| porphobilinogen deaminase [Pirellula staleyi DSM 6068] Length = 311 Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats. Identities = 115/306 (37%), Positives = 175/306 (57%), Gaps = 5/306 (1%) Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M P R+GTR SPLA A R L+ ++ +I ++T+GD+ T++ L +IG Sbjct: 1 MSDAPKLRLGTRASPLARWQADWVRDQLIAA----GIDVEMILITTEGDQQTSQPLGQIG 56 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G+GLFT+EI+++L++G+ID AVHS KD+PT + GL ++A RED D+ I SL Sbjct: 57 GQGLFTKEIQRRLLAGDIDLAVHSLKDLPTLPIDGLSLAAVPEREDTADILIGPAGTSLA 116 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + IGT SLRRKA LL R+D+ ++D RG ++TRL KL+ + HAI+LA AG+KRL Sbjct: 117 TLPSGAKIGTGSLRRKAQLLHARADLEILDIRGNVDTRLRKLDEGQYHAIILAAAGLKRL 176 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 K + + E L P+ GQGA+ IE+ ++P ++L+ ++H T +V ER+ LA Sbjct: 177 KLDDRMTERLEAPLMLPAVGQGALGIESRSDDPTTRKLLAPLSHAPTLQAVIAERSLLAA 236 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L C + + A L +VL+ DG+ S DA +G + A+ +R Sbjct: 237 LRAGCLAPVGAHAQVVDGQLTLAAVVLSIDGQSRLFASLTSAPADAAQLGEEVAELLRQQ 296 Query: 300 SNKNVF 305 + Sbjct: 297 GATELL 302 >gi|254467792|ref|ZP_05081198.1| porphobilinogen deaminase [beta proteobacterium KB13] gi|207086602|gb|EDZ63885.1| porphobilinogen deaminase [beta proteobacterium KB13] Length = 292 Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 153/291 (52%), Gaps = 2/291 (0%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + A + + K P + ++ T+GD I ++ L EIGGKGLF +E+E L++ + Sbjct: 1 MWQANYIADRIRE--KYPDTEVNVLSFKTQGDIILDQPLAEIGGKGLFIKELEHALLNDD 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 D AVHS KD+P L + +I A RE+ D FIS+ SL DL +VIGTSSLRR++ Sbjct: 59 ADLAVHSMKDVPMDLPEPFEICAISERENPSDAFISNKYASLDDLPQDAVIGTSSLRRQS 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 L+ R D+ + RG ++TRL KL++ AI+LA AG+ RL E IK L+++ + P Sbjct: 119 LIKHTRPDLIIESLRGNLQTRLKKLDSGIYDAIILASAGLIRLNLENRIKSTLDVKQYIP 178 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 S GQGA+ IE N + +E + +N E T V ER L GSC + A K Sbjct: 179 SVGQGALGIEILKNKSEVKEFLDFLNDEQTQIQVEAERKISKTLAGSCTVPMGAHASIKN 238 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307 + L V + DG + G + +++ + AQ + KN+ Sbjct: 239 NLLTIQAFVSSPDGIKMIRATDTGPCSEHLSLANNVAQSLIDQGAKNILGL 289 >gi|323489960|ref|ZP_08095181.1| porphobilinogen deaminase [Planococcus donghaensis MPA1U2] gi|323396256|gb|EGA89081.1| porphobilinogen deaminase [Planococcus donghaensis MPA1U2] Length = 309 Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats. Identities = 114/304 (37%), Positives = 169/304 (55%), Gaps = 5/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + L P I + TKGDRI + L+++GGKGL Sbjct: 2 RKIIVGSRRSKLALTQTNQFIDKLKAAGA--PFEFEIKEIVTKGDRIVDVMLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L EID AVHS KDMP+ L +GL I RED RD +I++ L DL + Sbjct: 60 FVKEIEQALFDREIDFAVHSMKDMPSVLPEGLAIGCIPEREDPRDAYIANDHVKLLDLPV 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +V+GTSSLRR + LL R D+ + RG I+TRL KL + AI+LA AG+KR+ + Sbjct: 120 GAVVGTSSLRRSSQLLLLRPDLDIQWIRGNIDTRLAKLKSGDFDAIILAAAGLKRMGWKD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ E L +++ P+ GQG++ IE + + + +NHEDT +VN ER FL ++DG Sbjct: 180 DLVTEFLEVDECLPAIGQGSLGIECREEDTELLSELAKLNHEDTALAVNAERKFLKDMDG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC+ IAG+A K + F G++ + + + + D I GR A+ I Sbjct: 240 SCQVPIAGYATVKDGEVTFTGLISSPEADQVFKEMAISH--DPIEAGRIVAEKISAQGGY 297 Query: 303 NVFN 306 ++ Sbjct: 298 DLIQ 301 >gi|302896420|ref|XP_003047090.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256728018|gb|EEU41377.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 334 Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats. Identities = 100/317 (31%), Positives = 153/317 (48%), Gaps = 15/317 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +GTR SPLALA +L + P H I ++T GDR N L GGKG Sbjct: 7 KNVINVGTRKSPLALAQTNIVVDALKA--QFPDHEFPIHGMTTTGDRDQNTALYNFGGKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-------HTA 115 L+T ++E++L++ E+D VHS KDMPT L +G + RED RD + H Sbjct: 65 LWTSQLEERLVNKELDLVVHSLKDMPTSLPEGCVLGCVTSREDPRDTLVIKKSLQEKHGW 124 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNKAHAILLAYA 174 ++L DL S+IGTSS+RR A L+R + D RG I+TRL KL ++ + I+LA A Sbjct: 125 KTLADLPAGSIIGTSSVRRIAQLVRRYPTLKFKDHRGNIQTRLQKLEDDPELTGIILAAA 184 Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 G++R+ I + L + + GQGA+ +E ++ K + +K I +E T + Sbjct: 185 GLQRMDLGHHISQFLESDTGGILHAVGQGALGVECRADDEKVLKFLKTIENEQTMLACEA 244 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIG 289 ERA + L+G C I L V++ G + +A G Sbjct: 245 ERAVMRALEGGCSVPIGVETKWVDGKLRLRATVVSLRGDEGVDAEMTEEIKTQEEADTFG 304 Query: 290 RDAAQYIRFISNKNVFN 306 + A+++ + + Sbjct: 305 KKVAKHLVDQGAGKILD 321 >gi|328768210|gb|EGF78257.1| hypothetical protein BATDEDRAFT_17445 [Batrachochytrium dendrobatidis JAM81] Length = 342 Score = 332 bits (851), Expect = 5e-89, Method: Composition-based stats. Identities = 109/324 (33%), Positives = 155/324 (47%), Gaps = 21/324 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K F IGTR S LA+ ++ L + P I ++T GD++ + L++IG K Sbjct: 16 SKTNFTIGTRESQLAMIQTTHVQALLKQ--QYPQLTFDINGMTTTGDQVQDVALSKIGTK 73 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSL 118 LFT+E+E L +D VHS KD+PT+L G+ + A L RE DV I H+ L Sbjct: 74 SLFTKELEMALDDHSVDFVVHSLKDLPTQLPSGMMVGAILEREQPNDVVIMSLKHSFTGL 133 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176 L S+IGTSS+RR A L R ++ D RG + TRL KL++ + AILLAYAGI Sbjct: 134 AQLPAGSIIGTSSVRRSAQLKRRFPNLVFQDIRGNLNTRLKKLDDPASPFAAILLAYAGI 193 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ I EIL + GQGAI IE N+ + L+ +NH T ER+F Sbjct: 194 HRMGWTDRITEILPTVTILHAVGQGAIGIECRENDTCVRSLLAPLNHTPTRIRCTAERSF 253 Query: 237 LAELDGSCKSAIAGFAYCKG-----STLYFYGIVLASDGKIFHE--VSRNGNRCD----- 284 + L+G C + + L G V + DG I +S + + D Sbjct: 254 MRSLEGGCSVPLGVSTSIEPNDTGIDVLCLTGSVTSLDGSIELRHAMSMDLDSEDIEEKV 313 Query: 285 --AINIGRDAAQYIRFISNKNVFN 306 A +G A + K+V + Sbjct: 314 TMAHKLGTALANVLIERGAKDVLD 337 >gi|260574199|ref|ZP_05842204.1| porphobilinogen deaminase [Rhodobacter sp. SW2] gi|259023665|gb|EEW26956.1| porphobilinogen deaminase [Rhodobacter sp. SW2] Length = 314 Score = 332 bits (851), Expect = 5e-89, Method: Composition-based stats. Identities = 130/303 (42%), Positives = 180/303 (59%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR SPLAL A ETR SLM +P I+ + GD++ +R L EIGGKGLF Sbjct: 11 PLKIGTRGSPLALWQAHETRRSLMAAFSLPEAAFEIVVIKVTGDQVQDRALKEIGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE L+ G ID AVHS KDMPT +GL + YLPRED+RD F+S T L DL Sbjct: 71 TREIEDALLDGSIDIAVHSMKDMPTLQPEGLLLDCYLPREDVRDAFVSPTVARLADLPHG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G+SSLRR+A L R D+++++FRG ++TR+ KL + A A LA AG+ RL V Sbjct: 131 ATVGSSSLRRRAQLAARRPDLNLVEFRGNVQTRMKKLEDGVAVATFLAMAGLNRLGMAHV 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + +E+ P+ QGAI IE +P+A+ L+ I+H T + CERA+L ELDGSC Sbjct: 191 ARSAIEVEEMLPAVAQGAIGIERRTADPRAEALLAGIHHGPTGIRLACERAYLQELDGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + IAG + +G ++ G +L DG DA GRD A+ + + + Sbjct: 251 ATPIAGMSVLEGDRIWLRGEILRPDGSEVIAGEIRAAASDAAEAGRDLARQLLGRAPEGF 310 Query: 305 FNF 307 F++ Sbjct: 311 FSW 313 >gi|56698469|ref|YP_168844.1| porphobilinogen deaminase [Ruegeria pomeroyi DSS-3] gi|56680206|gb|AAV96872.1| porphobilinogen deaminase [Ruegeria pomeroyi DSS-3] Length = 319 Score = 332 bits (851), Expect = 5e-89, Method: Composition-based stats. Identities = 134/307 (43%), Positives = 188/307 (61%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A+ETR L +P I+ +ST GD +R L EIG Sbjct: 11 PLKIGTRGSPLALAQAYETRHRLGAAFDLPEDAFEIVVISTTGDNRAMIEADRPLKEIGN 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ ++ G+ID AVHS KDMP + GL + +LPRED+RD FIS +++D Sbjct: 71 KGLFTKEIEEAMLRGDIDIAVHSTKDMPVEQPAGLVLDTFLPREDVRDAFISPGHSAIRD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L +V+GTSSLRRKA LL R D+ V++FRG ++TRL KL+ A LA AGI+RL Sbjct: 131 LPLGAVVGTSSLRRKAQLLNRRPDLKVVEFRGNVQTRLRKLSEGVAECTFLAMAGIRRLN 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +V ++ +D P+ QGAI IE +++ +A E++ I+H +T + ERA LA L Sbjct: 191 MAEVPATAISPDDMLPAIAQGAIGIERRMDDTRAAEMLTAIHHGETGQRLAAERALLAAL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A G+TL G VL DG + R+G+ D +G + A+ + + Sbjct: 251 DGSCETPIAGLAELDGTTLRLRGEVLRPDGSEAITLDRSGDVADGPALGTEMARELLAQA 310 Query: 301 NKNVFNF 307 F++ Sbjct: 311 GPGFFDW 317 >gi|161702955|ref|YP_369990.2| porphobilinogen deaminase [Burkholderia sp. 383] Length = 334 Score = 331 bits (850), Expect = 6e-89, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 166/305 (54%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVNILGMTTRGDQILDRTLSKVGGKGLF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 76 VKELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAG 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E Sbjct: 136 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLETR 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC Sbjct: 196 IRALLDVEASPPAAGQGALGIEIASHRSDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 255 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + +A A + LY G V +DGK G DA+ +GR + + Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGA 315 Query: 302 KNVFN 306 ++ Sbjct: 316 LDIVQ 320 >gi|253680789|ref|ZP_04861592.1| hydroxymethylbilane synthase [Clostridium botulinum D str. 1873] gi|253562638|gb|EES92084.1| hydroxymethylbilane synthase [Clostridium botulinum D str. 1873] Length = 300 Score = 331 bits (850), Expect = 7e-89, Method: Composition-based stats. Identities = 107/297 (36%), Positives = 154/297 (51%), Gaps = 6/297 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + P N I +STKGDRI + L +IGGKGLF Sbjct: 3 IVVGSRGSKLALTQTNWVIDKIKQ--NNPQLNFEIKIISTKGDRIQHMLLDKIGGKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLALH 124 +EIE++LISG+ID AVHS KDM T + + L+ S RED RDV I + +S+ +L Sbjct: 61 QEIEEQLISGQIDLAVHSMKDMSTDIPEELKFSYVPIREDYRDVLILNKKYKSIDELPKG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGT S RRK LL +R+D+ V+ RG ++TR+ K+ I+LA AGIKRL E Sbjct: 121 AKIGTGSKRRKYQLLDYRTDLKVVPIRGNVDTRIKKIETENLDGIVLASAGIKRLGLEDK 180 Query: 185 IKE---ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I L + PSP QG + +E + ++K I H+ + ERAFL ++ Sbjct: 181 IDYNIFYLEKDIMLPSPAQGILALEIKRGRKDLENILKSIEHKASTIQAEAERAFLKGVN 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 G C I +T+ G++ DG + G+ +A +G + A+ I Sbjct: 241 GGCHVPIGALCNINKNTIEVTGLLGKEDGSKIIRKTLVGSIDEAEYVGYELAKIILK 297 >gi|224437777|ref|ZP_03658724.1| porphobilinogen deaminase [Helicobacter cinaedi CCUG 18818] gi|313144223|ref|ZP_07806416.1| porphobilinogen deaminase [Helicobacter cinaedi CCUG 18818] gi|313129254|gb|EFR46871.1| porphobilinogen deaminase [Helicobacter cinaedi CCUG 18818] Length = 323 Score = 331 bits (850), Expect = 7e-89, Method: Composition-based stats. Identities = 107/312 (34%), Positives = 170/312 (54%), Gaps = 14/312 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + IGTR S LAL A ++ L D + + + T+GD+I + L +IGGKGL Sbjct: 7 RKLIIGTRGSALALWQAQYVKNRLKDECR---LDSEFKIIKTQGDKILDVPLAKIGGKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E+KL+ EID AVHS KD+P ++L L ++A RED RD F+S +SL+ L+ Sbjct: 64 FTKELEQKLLDKEIDLAVHSLKDVPVEILPLLDLAAITEREDCRDCFLSMKYESLESLSQ 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GT+SLRR + +R+D+ + RG I+TRL KL N AI+LA AG+KRL + Sbjct: 124 GARVGTTSLRRSMQIKAFRADLDTLSLRGNIQTRLEKLKNGVFDAIILAQAGVKRLGIDV 183 Query: 184 VI-----KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 I+ ++ P+ GQGA+ IE ++P E + + H+ + V+ ER+F+ Sbjct: 184 KKNDMGICHIVPLDFMIPAMGQGALGIEMRKDSPYF-ETISRLTHKRSALCVSAERSFVR 242 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG-----NRCDAINIGRDAA 293 EL+G C+ I A + L +V +G+ + S ++ A ++G++ A Sbjct: 243 ELEGGCQVPIGVQAMYENGILRLRAMVGLPNGQEILQESLEDSILEEDKAKAESLGKNLA 302 Query: 294 QYIRFISNKNVF 305 Q K + Sbjct: 303 QSFIAKGAKEIL 314 >gi|162218053|ref|YP_621689.2| porphobilinogen deaminase [Burkholderia cenocepacia AU 1054] Length = 334 Score = 331 bits (849), Expect = 8e-89, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 165/305 (54%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 76 VKELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAG 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E Sbjct: 136 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC Sbjct: 196 IRALLDVEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 255 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + +A A + LY G V +DGK G DA+ +GR + + Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGA 315 Query: 302 KNVFN 306 ++ Sbjct: 316 LDIVQ 320 >gi|264679667|ref|YP_003279574.1| porphobilinogen deaminase [Comamonas testosteroni CNB-2] gi|262210180|gb|ACY34278.1| porphobilinogen deaminase [Comamonas testosteroni CNB-2] Length = 314 Score = 331 bits (849), Expect = 9e-89, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 155/289 (53%), Gaps = 8/289 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LA+ A ++ L H++ ++ ++TKGD+I +R L+++GGKGLF Sbjct: 11 IVIATRESQLAMWQAEHVQAILRGR----GHSVDLLGMTTKGDQILDRALSKVGGKGLFV 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P +L +G ++ + RED RD F+S+ SL +L + Sbjct: 67 KELEVALEEGRADLAVHSLKDVPMELPEGFVLACVMTREDPRDAFVSNRYASLDELPQGA 126 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ALL R D+ + RG + TRL KL+ + AI+LA AG+ RL+ + I Sbjct: 127 VVGTSSLRRQALLQALRPDLKIEALRGNVNTRLRKLDEGQYDAIVLAAAGLMRLEMSERI 186 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + P+ GQGA+ IE + + + + H TW +V ERA + GSC Sbjct: 187 RARFDPAQMLPAAGQGALGIEVRADRQDIIDALAPLAHMPTWLTVTAERAVSRCMGGSCS 246 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNRCD---AINIGR 290 +A + +G TL+ +G V + D A +G Sbjct: 247 MPLAAYGRFEGDTLHMDAAWGDMEGSKGLVRVQASAQVTDFASANALGE 295 >gi|295675858|ref|YP_003604382.1| porphobilinogen deaminase [Burkholderia sp. CCGE1002] gi|295435701|gb|ADG14871.1| porphobilinogen deaminase [Burkholderia sp. CCGE1002] Length = 332 Score = 331 bits (849), Expect = 9e-89, Method: Composition-based stats. Identities = 106/304 (34%), Positives = 162/304 (53%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 12 TLVIASRESRLAMWQAEHVRCALHKLY--PSCDVKILGMTTRGDQILDRTLSKVGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G +S + RED RD +S+ SL L Sbjct: 70 VKELEAALADGRADLAVHSLKDVPMELPAGFALSTIMEREDPRDALVSNQYDSLAALPAG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 130 AVVGTSSLRREAMLRMRYPHLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLADR 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+ ED P+ GQGA+ IE + + ++H+ T +V ER L GSC Sbjct: 190 IRALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHQHTAAAVEAERMVSRALGGSC 249 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISN 301 + +A +A L+ GIV DG+ + A+ +G + AQ + Sbjct: 250 EVPLAAYATWGDGALHLRGIVATPDGQRVLSAQASAPAPTVERALALGEEVAQSLAQQGA 309 Query: 302 KNVF 305 + Sbjct: 310 LEIV 313 >gi|296274257|ref|YP_003656888.1| porphobilinogen deaminase [Arcobacter nitrofigilis DSM 7299] gi|296098431|gb|ADG94381.1| porphobilinogen deaminase [Arcobacter nitrofigilis DSM 7299] Length = 312 Score = 331 bits (849), Expect = 9e-89, Method: Composition-based stats. Identities = 105/306 (34%), Positives = 159/306 (51%), Gaps = 6/306 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL + ++ L + P I + STK D+I + L +IGGKGL Sbjct: 2 KKIVIATRKSKLALWQSEYIKAEL--LKHYPDMVIELKTFSTKADKILDVPLAKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E L + E D AVHS KD+P + +G ++A R D RD F+S S+ DL Sbjct: 60 FTKELEIALENKEADIAVHSLKDVPVEFEEGFVLAALTKRFDPRDAFLSEKYASITDLPN 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++IGT+SLRR+ L R DI + D RG I TR+ KL + AI+LA G+++L+ E Sbjct: 120 GAIIGTTSLRRRMELKLLRPDIELKDLRGNINTRIAKLKAGEYDAIILAATGVQKLQIED 179 Query: 184 VIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +K I++ PS GQ + IET ++NP+ E++ V++ ++ ER+F+ L+ Sbjct: 180 EVKYFTPISIDEMIPSMGQATLGIET-LDNPELVEILSVLHDKNAEIESTIERSFVHTLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I A +++ IV DG + + N D G+ AQ Sbjct: 239 GGCQVPIGVKATILDENSVDVRAIVGMPDGSEYVQEDIKINIDDYKTAGQALAQTFIDQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKELLE 304 >gi|209516094|ref|ZP_03264954.1| porphobilinogen deaminase [Burkholderia sp. H160] gi|209503554|gb|EEA03550.1| porphobilinogen deaminase [Burkholderia sp. H160] Length = 332 Score = 331 bits (849), Expect = 9e-89, Method: Composition-based stats. Identities = 104/304 (34%), Positives = 162/304 (53%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P + I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 12 TLVIASRESRLAMWQAEHVRCALHKLY--PSCEVKILGMTTRGDQILDRTLSKVGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G +S + RED RD +S+ SL L Sbjct: 70 VKELEAALADGRADLAVHSLKDVPMELPAGFVLSTIMEREDPRDALVSNQYDSLAALPAG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L ++ V RG ++TR+ KL+ AI+LA AG+KRL Sbjct: 130 AVVGTSSLRREAMLRMRYPNLDVRPLRGNLDTRVAKLDRGDYAAIILAAAGLKRLGLADR 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+ ED P+ GQGA+ IE + + ++H+ T +V ER L GSC Sbjct: 190 IRALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHQHTAAAVEAERMVSRALGGSC 249 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISN 301 + +A +A L+ GIV DG+ + A+ +G + A + Sbjct: 250 EVPLAAYATWGDGALHLRGIVATPDGQRVLSAQASAPAPTLERALALGEEVAHSLVQQGA 309 Query: 302 KNVF 305 ++ Sbjct: 310 LDIV 313 >gi|77967966|gb|ABB09346.1| Porphobilinogen deaminase [Burkholderia sp. 383] Length = 378 Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 166/305 (54%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 62 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVNILGMTTRGDQILDRTLSKVGGKGLF 119 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 120 VKELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAG 179 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E Sbjct: 180 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLETR 239 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC Sbjct: 240 IRALLDVEASPPAAGQGALGIEIASHRSDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 299 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + +A A + LY G V +DGK G DA+ +GR + + Sbjct: 300 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGA 359 Query: 302 KNVFN 306 ++ Sbjct: 360 LDIVQ 364 >gi|187923070|ref|YP_001894712.1| porphobilinogen deaminase [Burkholderia phytofirmans PsJN] gi|238058734|sp|B2T1D1|HEM3_BURPP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|187714264|gb|ACD15488.1| porphobilinogen deaminase [Burkholderia phytofirmans PsJN] Length = 342 Score = 330 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 166/304 (54%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 12 TLVIASRESRLAMWQAEHVRCALHKLY--PSCDVKILGMTTRGDQILDRTLSKVGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G +S + RED RD +S+ SL L Sbjct: 70 VKELEAALADGRADLAVHSLKDVPMELPAGFALSTIMEREDPRDALVSNDYDSLAALPAG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL+KL+ AI+LA AG+KRL + Sbjct: 130 AVVGTSSLRREAMLRMRYPHLEVRPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLGER 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+ ED P+ GQGA+ IE + + ++H+ T +V ER L GSC Sbjct: 190 IRALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHDHTAAAVEAERMVSRALGGSC 249 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISN 301 + +A +A + L+ GIV DG+ + A+ +G++ A + Sbjct: 250 EVPLAAYATWRDGALHLRGIVATPDGQRVLSAQASAPAPSVERAVALGQEVASALEQQGA 309 Query: 302 KNVF 305 ++ Sbjct: 310 MDIV 313 >gi|328949818|ref|YP_004367153.1| Porphobilinogen deaminase [Marinithermus hydrothermalis DSM 14884] gi|328450142|gb|AEB11043.1| Porphobilinogen deaminase [Marinithermus hydrothermalis DSM 14884] Length = 305 Score = 330 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 158/305 (51%), Gaps = 9/305 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +GTR S LAL L + + P I + T+GDR + + Sbjct: 2 RVIVVGTRGSALALTQTRWVVERLKE--QWPEAEFKIKTIQTRGDRG-----APPTDRDI 54 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDLA 122 F +E+E+ L+ GEID AVHS KD+PT+ +GL I++ R D RDVFI + L+DL Sbjct: 55 FVKELEEALLRGEIDIAVHSLKDLPTEQPEGLVIASIPKRVDPRDVFIGRNGIRRLEDLP 114 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSS+RRKA LL +R D+ V + RG ++TRL+ L + + I+LA AG+ RL Sbjct: 115 EGAVVGTSSVRRKAQLLAYRPDLVVRELRGNVDTRLSALGSGEFDGIILAAAGLLRLDLR 174 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I ++ + P+PGQGA+ +E + A EL I+H T D ER+FL L Sbjct: 175 NRIDAFIDPKIMLPAPGQGALALEVREGDDIADELAYSIHHHPTDDRTTAERSFLHHLGA 234 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C + + A+ + TL G+V+A DG G+ +A +G + A+ I Sbjct: 235 GCLAPVGALAHVEEDGTLRLEGVVVAPDGSSMIHGEIEGDAEEAWELGAELARDILEQGG 294 Query: 302 KNVFN 306 K + Sbjct: 295 KRILE 299 >gi|121595211|ref|YP_987107.1| porphobilinogen deaminase [Acidovorax sp. JS42] gi|120607291|gb|ABM43031.1| porphobilinogen deaminase [Acidovorax sp. JS42] Length = 320 Score = 330 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 106/300 (35%), Positives = 155/300 (51%), Gaps = 8/300 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A +S L H + ++ ++T+GD+I +RTL+++GGKGLF Sbjct: 21 IVIATRESQLALWQAEHVQSLLRAR----GHAVALLGMTTRGDQILDRTLSKVGGKGLFV 76 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P +L +G ++ + RED RD F+S SL +L + Sbjct: 77 KELEVALEEGRADIAVHSLKDVPMELPQGFALACVMEREDPRDAFVSPGYASLDELPHGA 136 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ALL R D+ + RG ++TRL KL+ + AI+LA AG+KRL + I Sbjct: 137 VVGTSSLRRQALLQALRPDLQIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHERI 196 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + E P+ GQGA+ IE + +E + + HE TW +V ERA + GSC Sbjct: 197 RAVFTPEQMLPAAGQGALGIEIRGDRHDLREALAPLAHERTWLTVTAERAVSRAMGGSCS 256 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNR---CDAINIGRDAAQYIRFISN 301 +A G TL ++ A +G A +R Sbjct: 257 MPLAAHGQWDGDTLSLRAAWGDVAARVPLVRAEGAAPVHTLEQADALGLAVAAQLRTAGA 316 >gi|222111550|ref|YP_002553814.1| porphobilinogen deaminase [Acidovorax ebreus TPSY] gi|221730994|gb|ACM33814.1| porphobilinogen deaminase [Acidovorax ebreus TPSY] Length = 310 Score = 330 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 105/300 (35%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A +S L H + ++ ++T+GD+I +RTL+++GGKGLF Sbjct: 11 IVIATRESQLALWQAEHVQSLLRAR----GHAVALLGMTTRGDQILDRTLSKVGGKGLFV 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P +L +G ++ + RED RD F+S SL +L + Sbjct: 67 KELEVALEEGRADIAVHSLKDVPMELPQGFALACVMEREDPRDAFVSPGYASLDELPHGA 126 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL + I Sbjct: 127 VVGTSSLRRQVLLQALRPDLQIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHERI 186 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + E P+ GQGA+ IE + +E + + HE TW +V ERA + GSC Sbjct: 187 RAVFTPEQMLPAAGQGALGIEIRGDRHDLREALAPLAHERTWLTVTAERAVSRAMGGSCS 246 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNR---CDAINIGRDAAQYIRFISN 301 +A G TL ++ A +G A +R Sbjct: 247 MPLAAHGQWDGDTLSLRAAWGDVAARVPLVRAEGAAPVHTLEQADALGLAVAAQLRTAGA 306 >gi|170733765|ref|YP_001765712.1| porphobilinogen deaminase [Burkholderia cenocepacia MC0-3] gi|238058731|sp|B1JWR0|HEM3_BURCC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|169817007|gb|ACA91590.1| porphobilinogen deaminase [Burkholderia cenocepacia MC0-3] Length = 334 Score = 330 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 165/305 (54%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 76 VKELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAG 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E Sbjct: 136 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC Sbjct: 196 IRALLDVEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 255 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + +A A + LY G V +DGK G DA+ +GR + + Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGA 315 Query: 302 KNVFN 306 ++ Sbjct: 316 LDIVQ 320 >gi|161524048|ref|YP_001579060.1| porphobilinogen deaminase [Burkholderia multivorans ATCC 17616] gi|160341477|gb|ABX14563.1| porphobilinogen deaminase [Burkholderia multivorans ATCC 17616] Length = 402 Score = 330 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 108/304 (35%), Positives = 165/304 (54%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 87 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 144 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 145 VKELESALADGRADLAVHSLKDVPMMLPDGFALAAIMQREDPRDAFVSNDYASLDALPAG 204 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E Sbjct: 205 AVVGTSSLRREAMLRARYPQLQVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEAR 264 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++ED PP+ GQGA+ IE + ++ ++ T +V ER L GSC Sbjct: 265 IRALLDVEDSPPAAGQGALGIEIAAHRTDVAAWLEPLHDAQTALAVEAERMVSRALGGSC 324 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301 + +A A + LY G V DG + DA+ +GR + + Sbjct: 325 EVPLAAHAVWRAGELYLTGRVSTIDGTRVLTAEECASVVTVADALALGRAVSDELEAQGA 384 Query: 302 KNVF 305 + Sbjct: 385 LEIV 388 >gi|134296607|ref|YP_001120342.1| porphobilinogen deaminase [Burkholderia vietnamiensis G4] gi|166201499|sp|A4JGV4|HEM3_BURVG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|134139764|gb|ABO55507.1| porphobilinogen deaminase [Burkholderia vietnamiensis G4] Length = 333 Score = 330 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 169/305 (55%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 76 VKELENALADGRADLAVHSLKDVPMALPDGFALAAIMAREDARDAFVSNDYASLDALPAG 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L ++V+ RG ++TRL KL+ AI+LA AG+KRL E Sbjct: 136 AVVGTSSLRREAMLRARYPHLNVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ ++++ED P+ GQGA+ IE + + + ++ T +V ER L GSC Sbjct: 196 IRALIDVEDSLPAAGQGALGIEIAAHRSDVAQWLAPLHDPHTALAVEAERMVSRALGGSC 255 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + +A A + LY G V +DG+ G DA+ +GR + + Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGRRVLSAQACGAVMTAADALALGRAVSDELDAQGA 315 Query: 302 KNVFN 306 +++ N Sbjct: 316 RDIVN 320 >gi|320101752|ref|YP_004177343.1| hydroxymethylbilane synthase [Isosphaera pallida ATCC 43644] gi|319749034|gb|ADV60794.1| hydroxymethylbilane synthase [Isosphaera pallida ATCC 43644] Length = 332 Score = 330 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 157/305 (51%), Gaps = 3/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RIGTR SPLA A + L D P + ++ + T GDR N L IGG Sbjct: 15 SHRRVRIGTRGSPLARWQAEWVAARLRDA--WPGLTVELVEIKTLGDRDRNSPLASIGGA 72 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT+EI++ L+ ++ AVHS KD+PT+ ++GL + A PRE+ RD I+ L+ L Sbjct: 73 GLFTKEIQRALLDCRVEIAVHSLKDLPTQPVEGLILGAVPPREEPRDALIAPAHGLLEHL 132 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GT SLRR+A LL R D+ V+ RG +ETRLN + A+LLA AG++RL Sbjct: 133 PAAARVGTGSLRRRAQLLWMRPDLEVVGVRGNVETRLNHALEGRLDAVLLAVAGLRRLGL 192 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I + L DF P+ GQGA+ IE ++P L+ ++ + SV ERA LA+L+ Sbjct: 193 DSAITQTLGPPDFLPAVGQGALGIECRGDDPDTLALLAPLDDPASRASVLAERALLADLE 252 Query: 242 GSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C + + + L VL G+ +G D +G A +R Sbjct: 253 AGCMVPLGAWGRSEADGLLALDAAVLDPAGRQRLAAHASGPANDPQTLGLAVAAELRRQG 312 Query: 301 NKNVF 305 + + Sbjct: 313 AEALL 317 >gi|254247511|ref|ZP_04940832.1| Porphobilinogen deaminase [Burkholderia cenocepacia PC184] gi|124872287|gb|EAY64003.1| Porphobilinogen deaminase [Burkholderia cenocepacia PC184] Length = 334 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 165/305 (54%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 76 VKELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAG 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E Sbjct: 136 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC Sbjct: 196 IRALLDVEASPPAAGQGALGIEIAAHRDDVAAWLASLHDPQTALAVEAERMVSRALGGSC 255 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + +A A + LY G V +DGK G DA+ +GR + + Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGA 315 Query: 302 KNVFN 306 ++ Sbjct: 316 LDIVQ 320 >gi|152992229|ref|YP_001357950.1| porphobilinogen deaminase [Sulfurovum sp. NBC37-1] gi|166217789|sp|A6Q7Y4|HEM3_SULNB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|151424090|dbj|BAF71593.1| porphobilinogen deaminase [Sulfurovum sp. NBC37-1] Length = 323 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 107/312 (34%), Positives = 165/312 (52%), Gaps = 10/312 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK I TR S LAL A+ + + P + + +++KGD+I ++ L +GG Sbjct: 1 MEK--LVIATRASNLALWQAYHIKERIETA--FPEVRVELNEITSKGDKILDKPLALVGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG FT+E+E ++I+G AVHS KD+PT + +GL++ A R+D DVF+SHT +SL + Sbjct: 57 KGHFTKELEDEMIAGNAHLAVHSLKDVPTYIPEGLELCAITERQDQSDVFLSHTYKSLSE 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT+SLRR+ LL R D+ V D RG + TRL KL + AI+LAY G+ RL Sbjct: 117 LPEGAVVGTTSLRRRMQLLEKRPDLKVKDLRGNVNTRLRKLKEGQYDAIILAYIGLYRLD 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K I + ++ F P GQ A+ IE NN + +E+ +NHE T+ ER F++ + Sbjct: 177 LLKDIPYVEKLDFFIPPMGQAALGIEIVANNDRIREIAMTLNHEPTFICTKVERDFISVI 236 Query: 241 DGSCKSAIAGFAYCKGS------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 C + +A A T+ ++ DG S +A +G + AQ Sbjct: 237 GAGCSAPVAVNATMDKKEDDKVPTISVRAMIGYPDGTHILHKSLTVPLNEADILGDELAQ 296 Query: 295 YIRFISNKNVFN 306 + ++ Sbjct: 297 AMIEEGALDILE 308 >gi|218295973|ref|ZP_03496753.1| porphobilinogen deaminase [Thermus aquaticus Y51MC23] gi|218243711|gb|EED10239.1| porphobilinogen deaminase [Thermus aquaticus Y51MC23] Length = 303 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 106/302 (35%), Positives = 156/302 (51%), Gaps = 8/302 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +GTR S LALA L + P + + T+GD + I Sbjct: 2 RVIVVGTRGSALALAQTRWVVERLKE--SWPEAEFKVKTIRTRGDGGADPREQAI----- 54 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+++ L++ EID AVHS KD+PT+ KGL+I+A R+D RD F+ + L+DL Sbjct: 55 FVKELQEALLAREIDIAVHSLKDLPTEEPKGLKIAAIPRRQDPRDAFLGKAFKRLEDLPP 114 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSS+RRKA +L R D+ V D RG ++TRL L + AI+LA AG+ RL Sbjct: 115 GAVVGTSSIRRKAQILAHRPDLVVKDLRGNVDTRLAALGGGEYDAIILAAAGLIRLDLRN 174 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + L E P+PGQGA+ +E + A+EL ++H + D V ERAFL L Sbjct: 175 RIDQFLEPEVMLPAPGQGALALEVRQGDDLAEELSYALHHHASHDRVRAERAFLRGLGAG 234 Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C + + A + TL G + A DGK F G +A +G + A+ I + Sbjct: 235 CLAPVGALAQVGEDGTLVLEGGIFAPDGKSFIRAEIEGEASEAEELGLELARDILEQGGR 294 Query: 303 NV 304 + Sbjct: 295 EI 296 >gi|331270186|ref|YP_004396678.1| porphobilinogen deaminase [Clostridium botulinum BKT015925] gi|329126736|gb|AEB76681.1| porphobilinogen deaminase [Clostridium botulinum BKT015925] Length = 300 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 105/298 (35%), Positives = 153/298 (51%), Gaps = 6/298 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +G+R S LAL + + H P N I +STKGDRI + L +IGGKGLF Sbjct: 2 KIIVGSRGSKLALTQTNWVIDKIKENH--PQVNFEIKIISTKGDRIQHMPLDKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLAL 123 +EIE++LI+G+ID AVHS KDM T + + L+ S RED RDV I + +S+ +L Sbjct: 60 VQEIEEQLINGQIDLAVHSMKDMSTDIPEELKFSYVPVREDYRDVLILNKKYKSIDELPK 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGT S RRK LL +R+D+ ++ RG ++TR+ K+ I+LA AGIKRL E Sbjct: 120 GAKIGTGSKRRKYQLLDYRNDLKIVPIRGNVDTRIKKIETENLDGIVLASAGIKRLGLED 179 Query: 184 VIKE---ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I L + PSP QG + +E + ++K I E + ERAFL + Sbjct: 180 KIDYNIFYLEKDIMLPSPAQGILALEIKRGRKDLENILKSIEDEISTIQAEAERAFLKGV 239 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +G C I T+ G++ D + G+ +A IG + A+ + Sbjct: 240 NGGCHVPIGALCSINKDTVEVTGLLGKEDASKIVRKTLVGSIDEAEYIGYELAKIVLK 297 >gi|319760696|ref|YP_004124634.1| porphobilinogen deaminase [Candidatus Blochmannia vafer str. BVAF] gi|318039410|gb|ADV33960.1| porphobilinogen deaminase [Candidatus Blochmannia vafer str. BVAF] Length = 310 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 99/299 (33%), Positives = 145/299 (48%), Gaps = 2/299 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR S LA+ + + L H P I ++P+ T GD+ N T Sbjct: 1 MNTKFLRIATRKSRLAICQSEYVCNELKRFH--PNIKIKLVPIVTTGDKFFNSTTKIKIK 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG F +E+E LI D AVHS KDM L L + R D RD F+S ++ Sbjct: 59 KGAFIKELEYALIENRADIAVHSMKDMTASLPNELILPILCKRIDPRDAFVSIKYSNIDM 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S+IGTSSLRR+ + RSD+++ + RG I+TR+ KL+ K AI+LA AG+ RL Sbjct: 119 LPSGSIIGTSSLRRQCQIQARRSDLTLHNLRGNIDTRIKKLHQGKYDAIILAVAGLNRLH 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + IK +N +D P+ GQGAI IE + L+ + H++T + ERA L Sbjct: 179 LTQYIKTYINPKDLLPAMGQGAIAIECRKKDIDTLSLLSPLYHQETSLRIQSERAVTTYL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ IA ++ ++ ++ DG A +G A+ + Sbjct: 239 EGYCQFPIASYSEIHNHQIWLRALIGLPDGSKIIRTEGRAPFDQAEKLGLFLAKKLLNQ 297 >gi|206560969|ref|YP_002231734.1| porphobilinogen deaminase [Burkholderia cenocepacia J2315] gi|238058732|sp|B4E8C4|HEM3_BURCJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|198037011|emb|CAR52932.1| putative porphobilinogen deaminase protein [Burkholderia cenocepacia J2315] Length = 334 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 165/305 (54%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 76 VKELEAALADGRADLAVHSLKDVPMALPDGFALAAIMEREDPRDAFVSNDYASLDALPAG 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E Sbjct: 136 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC Sbjct: 196 IRALLDVEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPRTALAVEAERMVSRALGGSC 255 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + +A A + LY G V +DGK G DA+ +GR + + Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVMTVADALALGRAVSDELEAQGA 315 Query: 302 KNVFN 306 ++ Sbjct: 316 LDIVQ 320 >gi|218290821|ref|ZP_03494890.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius LAA1] gi|218239179|gb|EED06380.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius LAA1] Length = 305 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 113/303 (37%), Positives = 159/303 (52%), Gaps = 4/303 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+ TR S LAL L V I ++P+ T+GD I +R L+E+GGKGL Sbjct: 2 RILRVATRRSALALTQTNHVVDLLKRV--IHDLKFELVPIRTRGDEIVDRALSEVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +IE L +G D AVHS KD+P +L GL I A RED RD IS T Q L DL Sbjct: 60 FVADIEDALATGRADLAVHSLKDVPFELRDGLTIGAVPRREDPRDALISRTGQGLFDLPP 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRR+A L R R D+ V RG ++TR+ +L + AI+LA +G+ RL + Sbjct: 120 GARVGTSSLRRQAALRRLRPDLRVDTLRGNVDTRIRRLEEGQFDAIVLAASGLHRLGLAE 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I E L ++ F P+ GQGA+ IE + + + I D +V ERAFL+ L+GS Sbjct: 180 KITEYLPVDRFVPAVGQGALAIECRAEDDEVLRYLGAIADPDATRAVEAERAFLSRLEGS 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I +A G L V G + ++ R G+ DA +G A+ + + Sbjct: 240 CQVPIGAYAEPVGHELRLIAFVADPSGARYLQLERTGS--DARALGVAVAEEMLRQGAET 297 Query: 304 VFN 306 Sbjct: 298 WLE 300 >gi|300703401|ref|YP_003745003.1| hydroxymethylbilane synthase [Ralstonia solanacearum CFBP2957] gi|299071064|emb|CBJ42373.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Ralstonia solanacearum CFBP2957] Length = 334 Score = 329 bits (845), Expect = 3e-88, Method: Composition-based stats. Identities = 104/304 (34%), Positives = 160/304 (52%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF Sbjct: 22 LVIASRESRLAMWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLFV 79 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P +L G + A L RED RD F+S+ L L + Sbjct: 80 KELEVALAEGRADLAVHSLKDVPMELPPGFALPAILEREDPRDAFVSNQYADLAALPAGA 139 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+A L + + RG ++TRL KL+ AI+LA AG+KRL + I Sbjct: 140 VVGTSSLRREASLRARFPHLVIQPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLSERI 199 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ + P+ GQGA+ IET + Q + ++H T +V ERA L GSC+ Sbjct: 200 RAVIASDVSLPAAGQGALGIETRADRTDVQAWLAPLHHLPTALAVTAERAVSRRLGGSCQ 259 Query: 246 SAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISN 301 +A FA+ L V + DG+ +A +G AQ + Sbjct: 260 VPLAAFAHWTDAGALRLRAFVASQDGRRKLAAEGEATPATLAEAEALGAHVAQQMLDGGA 319 Query: 302 KNVF 305 +++ Sbjct: 320 RDIL 323 >gi|320335860|ref|YP_004172571.1| Porphobilinogen deaminase [Deinococcus maricopensis DSM 21211] gi|319757149|gb|ADV68906.1| Porphobilinogen deaminase [Deinococcus maricopensis DSM 21211] Length = 313 Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats. Identities = 111/307 (36%), Positives = 161/307 (52%), Gaps = 5/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR--TLTEIGG 60 + +GTR S LALA + L + + P I +STKGDR + TL + G Sbjct: 5 SRSITVGTRGSALALAQTRWVVARLKE--EWPDTEFRIQTISTKGDRDRSSLETLAQKGD 62 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLK 119 KG + +EIE L+S ID AVHS KD+PT +GL+IS+ R + RD I + L Sbjct: 63 KGFWVKEIEDALLSSRIDIAVHSLKDLPTAQPEGLEISSIPKRVEARDALIGKEGMKRLV 122 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL + IGTSS+RRKA L +R D+ V D RG ++TRL L N+ AI+LA AG+ RL Sbjct: 123 DLPQGARIGTSSVRRKAFLRAFRPDLDVKDLRGNVDTRLAALAGNEYDAIILAAAGLTRL 182 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I E+++ + P+PGQGA+ +ET ++ A E+ I+ T D ER FLA Sbjct: 183 EMRNRIDELVDPDILLPAPGQGALALETRSDDDLAVEVAYAIHDRATDDRTTAEREFLAG 242 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L C + + A KG L G V A DG + G+ + ++G A+ + Sbjct: 243 LGAGCMAPVGALATLKGGVLTLEGWVGALDGTQVIRATIEGDADECADLGAQLAEDMLAQ 302 Query: 300 SNKNVFN 306 + + + Sbjct: 303 GAQALID 309 >gi|167585805|ref|ZP_02378193.1| porphobilinogen deaminase [Burkholderia ubonensis Bu] Length = 328 Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats. Identities = 107/304 (35%), Positives = 164/304 (53%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 71 VKELENALADGRADLAVHSLKDVPMALPDGFSLAAIMTREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL + Sbjct: 131 AVVGTSSLRREAMLRARYPHLQVQPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLDAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ ++ ++D PP+ GQGA+ IE + + ++ T +V ER L GSC Sbjct: 191 IRALIGVDDSPPAAGQGALGIEIASHRADVAAWLAPLHDHATALAVEAERMVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301 + +A A + LY G V +DGK + DA+ +GR A + Sbjct: 251 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTSEECASVMTVADALALGRAVADALEAQGA 310 Query: 302 KNVF 305 ++ Sbjct: 311 LDIV 314 >gi|319785862|ref|YP_004145337.1| porphobilinogen deaminase [Pseudoxanthomonas suwonensis 11-1] gi|317464374|gb|ADV26106.1| porphobilinogen deaminase [Pseudoxanthomonas suwonensis 11-1] Length = 301 Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats. Identities = 106/301 (35%), Positives = 152/301 (50%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL + + L H P +V++PLST+GD + +R+L IGGKGLF Sbjct: 3 TLRIATRKSPLALWQSEHVAARLRAAH--PGLEVVLVPLSTRGDEVLDRSLAAIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E + GE DCAVHS KD+P +L G + A L R D D F+S+ L L Sbjct: 61 LKELEIAMERGEADCAVHSLKDVPMELEPGFVLPAVLERADPADAFVSNDFADLDALPQG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A L R D+ + D RG + TRL KL+ + HAI+LA AG++RL + Sbjct: 121 AVVGTSSLRRQAQLRARRPDLQLRDLRGNVNTRLAKLDAGEYHAIILACAGLQRLGLDAR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ L + P+P Q + E + + L+ ++ H T + ERA L GSC Sbjct: 181 IRARLVPPQWLPAPAQAVVACECRAGDERTIGLLSLLEHAPTRAVIEAERALNRGLHGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 +A +A TL +V ++ G D +G A + Sbjct: 241 HVPVAAYAELHDRTLRLQALVGSAADGRAVRAEGEGPAADPQTLGSRLAAELLERGAGEF 300 Query: 305 F 305 Sbjct: 301 L 301 >gi|296423212|ref|XP_002841149.1| hypothetical protein [Tuber melanosporum Mel28] gi|295637383|emb|CAZ85340.1| unnamed protein product [Tuber melanosporum] Length = 349 Score = 329 bits (844), Expect = 4e-88, Method: Composition-based stats. Identities = 99/313 (31%), Positives = 155/313 (49%), Gaps = 11/313 (3%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K RIG+R S LAL R SL ++ P N II ++T GD + L G K Sbjct: 27 ARKNIRIGSRKSKLALVQTHLVRDSLQAIY--PDTNFEIIAMTTTGDNNQTKPLHNFGAK 84 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118 L+T+E+E L+ +++ VHS KDMPT+L G +I A L RED RD + T +SL Sbjct: 85 ALWTQELEVLLLEDKLEMIVHSLKDMPTQLPHGCKIGAILEREDPRDALVMKTGSSYKSL 144 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176 +DL SV+GTSS+RR A + + ++ D RG + TRL KL++ + ++LA AG+ Sbjct: 145 EDLPEGSVVGTSSVRRSAQIKKRYPHLNFEDVRGNVGTRLAKLDDPASSYTCLILAAAGL 204 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 RL + I L+ + GQGA+ +E + ++++V+ H++T ER+ Sbjct: 205 IRLDLGERITGYLSSPCLLHAVGQGALGVEIRDGDEDTAKMLRVLGHKETTLHCLAERSL 264 Query: 237 LAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDA 292 + L+G C I + +V++ DG+ F V A N GR Sbjct: 265 MRTLEGGCSVPIGVETETATNGQMLMRAVVVSLDGQNFVNVEERMEVAGEEAADNFGRVV 324 Query: 293 AQYIRFISNKNVF 305 A + ++ Sbjct: 325 AGKLVAAGAGDIL 337 >gi|255725590|ref|XP_002547724.1| porphobilinogen deaminase [Candida tropicalis MYA-3404] gi|240135615|gb|EER35169.1| porphobilinogen deaminase [Candida tropicalis MYA-3404] Length = 340 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 92/314 (29%), Positives = 151/314 (48%), Gaps = 19/314 (6%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG R S LA+ + + ++ D P + I+ LST GD++ + L GGK L+T+E Sbjct: 16 IGGRKSKLAVVQSELVKKAIED--TFPNLSCSILALSTLGDKVQTQPLYTFGGKSLWTKE 73 Query: 68 IEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLK 119 +E L+ ++D VHS KDMPT L + ++ RED RD + +SLK Sbjct: 74 LEILLLDSIDEYPQLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAVVMKSGSPYKSLK 133 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIK 177 DL +++GTSS+RR + L++ + RG I+TRLNKL +N+ ++LA AG+ Sbjct: 134 DLPAGAIVGTSSIRRSSQLIKNYPHLRFESVRGNIQTRLNKLDQPDNEYCCLILASAGLI 193 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I L +D + GQGA+ IE + K + +++ I ER+ + Sbjct: 194 RLGLGDRITSFL--DDMYYAVGQGALGIEIRRGDDKVKPILQKIEDPIATVCCLAERSLM 251 Query: 238 AELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDA 292 L+G C + + T L GI+++ DG ++ E D +G + Sbjct: 252 RYLEGGCSVPLGVNSNYNEDTQELTLKGIIVSPDGSVWIEDEVVKTINCNEDCEQVGIEL 311 Query: 293 AQYIRFISNKNVFN 306 ++ K + + Sbjct: 312 GDKLKAKGAKEILD 325 >gi|320582367|gb|EFW96584.1| Phorphobilinogen deaminase [Pichia angusta DL-1] Length = 413 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 98/317 (30%), Positives = 158/317 (49%), Gaps = 17/317 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIG+R S LA+ + + ++ P I+ LST GD++ N+ L GGK L+ Sbjct: 81 TVRIGSRKSQLAVVQSEIVGIGIQKLY--PKLQTPIVKLSTLGDQVQNKPLYSFGGKSLW 138 Query: 65 TEEIEKKLIS-----GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQ 116 T+E+E L+ +ID VHS KDMPT L ++ L RED RD + + Sbjct: 139 TKELEVLLLQSFGEFEQIDMIVHSLKDMPTSLPDEFELGCILQREDPRDALVMRKDSPYK 198 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYA 174 SL DL SV+GTSS+RR A LL+ ++ RG + TR+NKL ++ ++LA A Sbjct: 199 SLSDLPDGSVVGTSSVRRSAQLLKNHPNLRFKSIRGNLNTRINKLDAPDSDYACVILAAA 258 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G+ R+ I + L E+ + GQGA+ +E N+PK +++ + ++ + T ER Sbjct: 259 GLIRINMGHRITQFLGPEEMLYAVGQGALGVEIRKNDPKMKKICQRLDCKSTSIRCRAER 318 Query: 235 AFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVS---RNGNRCDAINIG 289 L L+G C + ++ T LY +VL+ +G E + + N +A+ G Sbjct: 319 ELLRTLEGGCSVPVGVWSDYNKDTHELYMKSVVLSVEGTQSVEKTLIRKVENFEEAVAFG 378 Query: 290 RDAAQYIRFISNKNVFN 306 + A + K + + Sbjct: 379 HELALLLINGGAKAILD 395 >gi|254251705|ref|ZP_04945023.1| Porphobilinogen deaminase [Burkholderia dolosa AUO158] gi|124894314|gb|EAY68194.1| Porphobilinogen deaminase [Burkholderia dolosa AUO158] Length = 333 Score = 329 bits (843), Expect = 5e-88, Method: Composition-based stats. Identities = 107/304 (35%), Positives = 165/304 (54%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 76 VKELENALADGRADLAVHSLKDVPMALPDGFSLAAIMTREDPRDAFVSNDYASLDALPAG 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L ++V+ RG ++TRL KL+ AI+LA AG+KRL E Sbjct: 136 AVVGTSSLRREAMLRARYPHLNVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L ++D PP+ GQGA+ IE + + ++ T +V ER L GSC Sbjct: 196 IRALLAVDDSPPAAGQGALGIEIASHRTDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 255 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + +A A + LY G V +DG + DA+ +GR + + Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGTRVLTADACAAVISVADALALGRAVSDELEAQGA 315 Query: 302 KNVF 305 ++ Sbjct: 316 LDIV 319 >gi|148544908|ref|YP_001272278.1| porphobilinogen deaminase [Lactobacillus reuteri DSM 20016] gi|184154245|ref|YP_001842586.1| porphobilinogen deaminase [Lactobacillus reuteri JCM 1112] gi|227364048|ref|ZP_03848148.1| hydroxymethylbilane synthase [Lactobacillus reuteri MM2-3] gi|325683253|ref|ZP_08162769.1| hydroxymethylbilane synthase [Lactobacillus reuteri MM4-1A] gi|167008814|sp|A5VM67|HEM3_LACRD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|229836109|sp|B2G9H4|HEM3_LACRJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|60172703|gb|AAX14537.1| HemC [Lactobacillus reuteri] gi|148531942|gb|ABQ83941.1| hydroxymethylbilane synthase [Lactobacillus reuteri DSM 20016] gi|183225589|dbj|BAG26106.1| porphobilinogen deaminase HemC [Lactobacillus reuteri JCM 1112] gi|227070970|gb|EEI09293.1| hydroxymethylbilane synthase [Lactobacillus reuteri MM2-3] gi|324977603|gb|EGC14554.1| hydroxymethylbilane synthase [Lactobacillus reuteri MM4-1A] Length = 305 Score = 329 bits (843), Expect = 5e-88, Method: Composition-based stats. Identities = 102/308 (33%), Positives = 162/308 (52%), Gaps = 7/308 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +G+R S LA+A +SL + P I + T+GDR + +L +IGG Sbjct: 1 MTNKVI-VGSRKSKLAMAQTELVIASLEKI--FPDIKFEIKNVITEGDRNRHVSLAKIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLK 119 KG+F +EIE +L G ID AVHS KD+ L + L + A+ R D +S SL Sbjct: 58 KGVFVKEIEDELKDGTIDFAVHSLKDVMPILPEELVLGAFPKRVSPYDCLVSRKNLSSLN 117 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL + IGT+SLRR+ LL R D+ +I RG I+TRL K++ I+LA AG+ RL Sbjct: 118 DLPKGARIGTNSLRRQGQLLSIRPDLKIIPIRGNIDTRLRKIDTEALDGIILAEAGLTRL 177 Query: 180 KKEKVIKEILNIEDFP-PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + +L+++++ P+ GQG + IE N+ + ++++ IN E++ V ER F+ Sbjct: 178 NIDLSSYHVLDLQNYIMPAVGQGCLAIECRKNDTRIRKMLDQINDEESAYCVQVEREFMR 237 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 EL GSC I G AY K + F G++ + +G+ + ++ + +G+ A + Sbjct: 238 ELGGSCNFPIGGHAYAKNGQILFDGLIASPNGEHVIKETKI--PANNSGVGKKVADQLLA 295 Query: 299 ISNKNVFN 306 + Sbjct: 296 KDKFGIIE 303 >gi|300690776|ref|YP_003751771.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Ralstonia solanacearum PSI07] gi|299077836|emb|CBJ50474.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Ralstonia solanacearum PSI07] Length = 334 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 104/304 (34%), Positives = 158/304 (51%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF Sbjct: 22 LVIASRESRLAMWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLFV 79 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P +L G + L RED RD F+S+ L L + Sbjct: 80 KELEVALAEGRADLAVHSLKDVPMELPAGFALPTILEREDPRDAFVSNHYADLAALPAGA 139 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+A L + + RG ++TRL+KL+ AI+LA AG+KRL + I Sbjct: 140 VVGTSSLRREASLRARFPHLVIQPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLSERI 199 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ E P+ GQGA+ IE + P Q + ++H T +V ERA L GSC+ Sbjct: 200 RAVIAPEASLPAAGQGALGIEIRADRPDVQAWLAPLHHAPTALAVTAERAVSRRLGGSCQ 259 Query: 246 SAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIRFISN 301 +A FA L V + DG+ +A +G AQ + Sbjct: 260 VPLAAFAQWTDDGALRLRAFVASQDGRRKLAAEGETTPATLAEAEALGARVAQQMLDGGA 319 Query: 302 KNVF 305 ++ Sbjct: 320 HDIL 323 >gi|152980451|ref|YP_001352832.1| hydroxymethylbilane synthase [Janthinobacterium sp. Marseille] gi|151280528|gb|ABR88938.1| hydroxymethylbilane synthase [Janthinobacterium sp. Marseille] Length = 317 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 104/302 (34%), Positives = 159/302 (52%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LA+ A R L ++ P +I I+ ++T+GD+I +RTL+++GGKGL Sbjct: 7 KKLVIASRESRLAMWQAEHVREKLAILY--PQCSIEILGMTTRGDQILDRTLSKVGGKGL 64 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E + D AVHS KD+ L G +++A L RED RD F+S+ +L+ L Sbjct: 65 FVKELEVAIAEQRADLAVHSLKDVAMTLPDGFELAAVLEREDPRDAFVSNEFDTLEALPA 124 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+AL+ + + RG ++ RL KL+N + AI+LA AG+KRL Sbjct: 125 GAIVGTSSLRRQALIAARYPQLVIRPLRGNLDRRLGKLDNGEYAAIILAAAGLKRLGLTA 184 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L E P+PGQGA+ IE +E + +NH +T +V ER GS Sbjct: 185 RIRSYLPPEQSLPAPGQGAMAIEILSERADLKEWLAPLNHTETALAVTAERTVSRNFGGS 244 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ +A FA G + I+ DG +G +GR A ++ Sbjct: 245 CQIPLAAFATIDGVNMRLRAIIATPDGSKMASADLSGAANAPEALGRQIADALQQQDAAA 304 Query: 304 VF 305 + Sbjct: 305 IL 306 >gi|219848200|ref|YP_002462633.1| porphobilinogen deaminase [Chloroflexus aggregans DSM 9485] gi|219542459|gb|ACL24197.1| porphobilinogen deaminase [Chloroflexus aggregans DSM 9485] Length = 324 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 97/312 (31%), Positives = 156/312 (50%), Gaps = 14/312 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LA + + L + ++ + ++T GDR+ + L+ +G KGLF Sbjct: 4 LLLGTRGSALARTQSEWVANVLR--NTFADLSVELRIITTTGDRVLDVALSAVGDKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDLA 122 +E+E+ L++G++D VHSAKDMPT GL +SA+ RED RDV + L L Sbjct: 62 KELEQALLAGDVDLCVHSAKDMPTATPPGLMLSAFPVREDPRDVLVVRHADVGTDLATLP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IGTSSLRR + L R D+ + D RG ++TRL KL +++ A++LA AG++RL Sbjct: 122 TGARIGTSSLRRASQLRYHRPDLHLNDVRGNVDTRLRKLASDQYDALILAAAGLRRLGLW 181 Query: 183 K---------VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 + L+ P+ QG + +ET ++ LV ++ + E Sbjct: 182 DGTPGASIGAALVYPLDPSVMLPAVAQGILAVETRTDDETTNRLVAALDDSAARTAALAE 241 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 RAFL L+G C+ +A A + L+F G+V A DG + G+ +G A Sbjct: 242 RAFLRRLEGGCQIPVAAHAVLTEAGLHFRGMVGALDGSTLVFAEQVGDPAQPEAVGIAVA 301 Query: 294 QYIRFISNKNVF 305 + + + + Sbjct: 302 EAVLAQGGEAIL 313 >gi|89900504|ref|YP_522975.1| porphobilinogen deaminase [Rhodoferax ferrireducens T118] gi|122996949|sp|Q21XQ9|HEM3_RHOFD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|89345241|gb|ABD69444.1| porphobilinogen deaminase [Rhodoferax ferrireducens T118] Length = 315 Score = 328 bits (842), Expect = 6e-88, Method: Composition-based stats. Identities = 105/299 (35%), Positives = 152/299 (50%), Gaps = 8/299 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LAL A + L H + ++ ++T GD+I +R L+++GGKGLF Sbjct: 3 TLTIATRESRLALWQAEYVQDLLTRR----GHQVGLLGMTTLGDQILDRALSKVGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G ++ + RED RD F+S+ +L L Sbjct: 59 VKELEVALEDGRADLAVHSLKDVPMELPDGFALACVMEREDPRDAFVSNQYANLASLPQG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR ALL R D+ + RG ++TRL KL++ AI+LA AG+KRL + Sbjct: 119 AVVGTSSLRRMALLRALRPDLKIEPLRGNLDTRLRKLDDGMYAAIVLAAAGLKRLGLSQR 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ D P+ GQGA+ IE + + + H TW +V+ ERA + GSC Sbjct: 179 IRATFEPTDMLPAAGQGALGIEVRSQRQDVIDALAPLAHHTTWLAVSAERAVSRAMGGSC 238 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNRCD---AINIGRDAAQYIRFI 299 +A +A L DGK+ V + D A +G A +R Sbjct: 239 SMPLAAYATLAADILTIDAAWGDPDGKLALVHVRASAAVSDLASATALGARVAADLRAA 297 >gi|46199940|ref|YP_005607.1| porphobilinogen deaminase [Thermus thermophilus HB27] gi|55980314|ref|YP_143611.1| porphobilinogen deaminase [Thermus thermophilus HB8] gi|55976454|sp|Q72H57|HEM3_THET2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|81600541|sp|Q5SLE8|HEM3_THET8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|46197567|gb|AAS81980.1| porphobilinogen deaminase [Thermus thermophilus HB27] gi|55771727|dbj|BAD70168.1| porphobilinogen deaminase [Thermus thermophilus HB8] Length = 301 Score = 328 bits (841), Expect = 7e-88, Method: Composition-based stats. Identities = 109/303 (35%), Positives = 163/303 (53%), Gaps = 8/303 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +GTR S LALA L + P I + T+GD+ + I Sbjct: 2 RVVVVGTRGSALALAQTRFVVERLKE--TWPETEFKIRTIKTRGDQGASPREEAI----- 54 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EI++ L+S EID AVHS KD+PT+ +GL+I++ R+D RDVF+ A+ LKDL Sbjct: 55 FVKEIQEALLSREIDIAVHSLKDLPTESPRGLKIASVPRRQDPRDVFLGKAAKRLKDLPP 114 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSS+RRKA +L R D+ V D RG ++TRL L N + I+LA AG+ RL Sbjct: 115 GAVVGTSSVRRKAQILALRPDLVVRDLRGNVDTRLAALGNGEYDGIVLAAAGLIRLDLRN 174 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I E L+ + P+PGQGA+ +E + A+EL ++H ++ V ERAFL L Sbjct: 175 RIDEFLDPGEVLPAPGQGALALEVREGDDLAEELCYALHHPPSYHRVRAERAFLRGLGAG 234 Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C + + A+ + TL G++L DGK F G+ +A +G D A+ + + Sbjct: 235 CLAPVGALAHVEEDGTLRLEGVLLTPDGKSFIRAEIEGDVSEAEELGLDLARDVLEQGGR 294 Query: 303 NVF 305 + Sbjct: 295 EIL 297 >gi|320168193|gb|EFW45092.1| porphobilinogen deaminase [Capsaspora owczarzaki ATCC 30864] Length = 333 Score = 328 bits (841), Expect = 8e-88, Method: Composition-based stats. Identities = 101/314 (32%), Positives = 144/314 (45%), Gaps = 11/314 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + R+G+R S LAL + L ++ + +ST GD + +R L++IG Sbjct: 1 MSGRVVRVGSRKSELALIQTNSVIARLKAIYS--DCTFELTTMSTTGDNVLDRALSKIGE 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117 K LFT+E+E L E+D VHS KD+PT L G+ I A R+ D I + Sbjct: 59 KSLFTKELEVALAQNEVDLVVHSLKDLPTTLPPGMTIGAICKRDSPYDAVILRAKFAGLT 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGI 176 L L SVIGTSSLRR A L R + D RG + TRL KL++ + ++LA AG+ Sbjct: 119 LATLPEGSVIGTSSLRRIAQLRRAFPHLVFRDVRGNLNTRLRKLDDAETYAGLILAEAGL 178 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ + + EIL E + GQGA+ IE N+ EL+K + DT ERAF Sbjct: 179 DRMGWQGRVSEILKPEVTLYAVGQGALAIECRENDTATLELLKPLQDNDTTLRCTAERAF 238 Query: 237 LAELDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNGNRCDAIN---IGRD 291 + L+G C + L G V + DG R DA +G+ Sbjct: 239 MRSLEGGCSVPLGVHTEFDASSGQLRLRGGVFSLDGTDSRFAERTITATDAATASGLGQA 298 Query: 292 AAQYIRFISNKNVF 305 A + + Sbjct: 299 LATEMIAAGAAEIL 312 >gi|296327549|ref|ZP_06870095.1| hydroxymethylbilane synthase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296155375|gb|EFG96146.1| hydroxymethylbilane synthase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 298 Score = 328 bits (841), Expect = 8e-88, Method: Composition-based stats. Identities = 109/299 (36%), Positives = 145/299 (48%), Gaps = 7/299 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60 KK IG+R S LALA A + L P + I + T GD+ N ++I Sbjct: 2 KKNIIIGSRGSILALAQANLVKDRLQ--GNYPNLSFEIKEIVTSGDKDLKSNWENSDISL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE+KL+ GEID AVHS KDMP KGL A RED RDV +S L Sbjct: 60 KSFFTKEIEQKLLDGEIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 LPQGAKVGTSSLRRAMNLKAVRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRTG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E LN E FPP+P QG + I+ N+ + ++ +K I++E V ER F Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKKFLKSIHNETVAKIVEIEREFSKIF 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DG C + + ++ G + F V + +GK + I A+ I+ Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTA-VYSDEGKQ-IRAVVEDDLAKGKEIAHMVAEEIKNK 295 >gi|258645838|ref|ZP_05733307.1| hydroxymethylbilane synthase [Dialister invisus DSM 15470] gi|260403210|gb|EEW96757.1| hydroxymethylbilane synthase [Dialister invisus DSM 15470] Length = 307 Score = 328 bits (841), Expect = 8e-88, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 171/306 (55%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ K I TR S LAL A + + D + P + ++P++TKGD+I +R+L EIGG Sbjct: 1 MKDKII-IATRESLLALWQAEHVKKRIEDTY--PEIQVELLPVTTKGDQILDRSLLEIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+EK L+ + D AVHS KDM + GL+++A RED RD F+S SL++ Sbjct: 58 KGLFIKELEKLLLEKKADIAVHSLKDMTAVIPDGLKLAAVTAREDPRDAFVSLEYGSLQE 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A LL D+ + RG ++TRL L+ A++LA AG+KRL Sbjct: 118 LPEGAVVGTSSLRRQAQLLHLWPDLQIKTLRGNVQTRLRHLDEGNYDAVILAAAGLKRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ ++ D P+ GQG + IET + + + E+++ I+ E + ERAFL ++ Sbjct: 178 LQERIQSYISTCDSIPAAGQGVMAIETRIGDDETMEIIQFIHDEKVASCIMAERAFLEKV 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G CK +A + + + DGK ++ S NG DA +G A+ + Sbjct: 238 GGDCKVPAGIYAVPFLGHIEAVAFIGSPDGKEMYKRSLNGQTQDAKQLGESLAEALIADG 297 Query: 301 NKNVFN 306 + Sbjct: 298 GGRILE 303 >gi|256827644|ref|YP_003151603.1| porphobilinogen deaminase [Cryptobacterium curtum DSM 15641] gi|256583787|gb|ACU94921.1| porphobilinogen deaminase [Cryptobacterium curtum DSM 15641] Length = 313 Score = 328 bits (841), Expect = 8e-88, Method: Composition-based stats. Identities = 101/312 (32%), Positives = 153/312 (49%), Gaps = 8/312 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K IGTR S LAL A + R+ + P + + + TKGD+I + L++IG Sbjct: 1 MTDKTITIGTRGSKLALWQAEKVRALIQA--TFPEVHCAVKVIRTKGDKILDVALSKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLK 119 KGLFT+E+E+ L+ GE+D VHS KDMPT L KGL I+ R DV + S +L Sbjct: 59 KGLFTKELERCLLEGEVDVCVHSMKDMPTVLPKGLFIAGVTERAYPNDVIVASAKGLTLS 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL + + T SLRR A L R R D++ + RG I+TR+ ++ + A +LA AG+ RL Sbjct: 119 DLPAGARVATGSLRRVAQLARLRPDVTACEIRGNIDTRIGRVLAGEFDAAILAAAGLYRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E+ I ++ E+ P+ GQGAI +E ++ + L I+H+ T +V ER + Sbjct: 179 GLEEQISSLIPTEEMIPAVGQGAIALEARADDREVAHLCTAISHQPTLRAVEAERYIMRA 238 Query: 240 LDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 L+G C+ + +A ++ V DG F + AI Sbjct: 239 LEGGCQVPMGAYATESEDEQGRRMIHIDAFVATLDGTRFLRAQASTPVDQAIEAAGKIVD 298 Query: 295 YIRFISNKNVFN 306 + + Sbjct: 299 DLVSQGATEILE 310 >gi|300087569|ref|YP_003758091.1| porphobilinogen deaminase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527302|gb|ADJ25770.1| porphobilinogen deaminase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 301 Score = 327 bits (840), Expect = 9e-88, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 155/303 (51%), Gaps = 3/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+G+R S LALA A ++ L P I+ +ST+GDR ++ E+ G G Sbjct: 2 RKIRLGSRSSRLALAQAEYLQARLRAA--FPEVEFDIVRISTQGDRNRLVSMGELPGVGF 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L +GE D AVHS KD+P +L ++A RED RDV IS + L L + Sbjct: 60 FVKEIESALAAGEADIAVHSLKDVPVELPPEFILAAVPEREDTRDVLISR-GRKLDQLPV 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+G+ SLRR + R D+ V RG IETR+ + + A++LA AG+ RL E Sbjct: 119 GAVVGSDSLRRSFQIRARRPDVEVRSIRGNIETRIKAVEEGRVDAVILAAAGLHRLGLET 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I E L + +F P PGQ A+ IE N+ ++E +NH T +V ER+FL L G Sbjct: 179 RIDEYLPLTEFLPPPGQAALGIEVRKNDDFSRETAGAVNHPPTCLAVTAERSFLRRLGGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C++ IA +G L G+V G+ S +G A +G A+ I Sbjct: 239 CRAPIAALGTVEGDVLTLRGMVADEAGRNIISRSLSGTASAAEAVGGALAEMILEAGANK 298 Query: 304 VFN 306 N Sbjct: 299 YIN 301 >gi|257124843|ref|YP_003162957.1| porphobilinogen deaminase [Leptotrichia buccalis C-1013-b] gi|257048782|gb|ACV37966.1| porphobilinogen deaminase [Leptotrichia buccalis C-1013-b] Length = 322 Score = 327 bits (840), Expect = 9e-88, Method: Composition-based stats. Identities = 116/322 (36%), Positives = 170/322 (52%), Gaps = 22/322 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVH----------------KIPPHNIVIIPLS 44 M+ IGTR S LALA A + + L+ + K P I + + Sbjct: 1 MKSNKIIIGTRGSILALAQAEKVKEMLIKKYDELRENENFCEIEGFDKKNPLEIELKVIV 60 Query: 45 TKGDRITNRTLTEIGG---KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYL 101 TKGD+ R T+I G K LF +EIEK+++ +ID AVHS KDMP +GL + + Sbjct: 61 TKGDKDL-RDFTKIKGTTQKDLFVKEIEKEMLENKIDLAVHSLKDMPQNTPEGLLNACFP 119 Query: 102 PREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 RED RDV +S + LK+L +SVIGT S+RR+ LL R+D+ + RG I TRL KL Sbjct: 120 MREDNRDVLVSKNGKKLKELDENSVIGTGSIRREKELLNLRNDVKIKAIRGNIHTRLKKL 179 Query: 162 NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221 ++ + AI+LA AG+KR+ E I E + + F P+PGQG +CI+ N+ K + L+K+I Sbjct: 180 DDGEYDAIVLAAAGLKRVGLENRITEYFDKDSFMPAPGQGILCIQCRENDNKIRHLLKII 239 Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281 N ++ ER F DG C + I + +G+TL G+ +G + GN Sbjct: 240 NDDEVTIMCKAEREFSKIFDGGCHTPIGCSSVIEGNTLKLKGM-FNDNGIRIFK-EVEGN 297 Query: 282 RCDAINIGRDAAQYIRFISNKN 303 R + + A+ I+ KN Sbjct: 298 RENPKETAQKLAEEIKKEEMKN 319 >gi|163797975|ref|ZP_02191917.1| Porphobilinogen deaminase [alpha proteobacterium BAL199] gi|159176769|gb|EDP61340.1| Porphobilinogen deaminase [alpha proteobacterium BAL199] Length = 321 Score = 327 bits (840), Expect = 1e-87, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 159/305 (52%), Gaps = 5/305 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R SPLAL E R L I + + T GD + +R L EIGGKGLF Sbjct: 15 LTLGSRGSPLALRQTHEVRDRLAAAWPELAGAIAVQEIRTTGDAVRDRPLAEIGGKGLFI 74 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L++G+ID AVHS KDM T + + A LPRED RD ++S A + DL + Sbjct: 75 KEIEQALMAGQIDAAVHSMKDMETTIAPASVLVAVLPREDPRDAWLSPIADRVDDLPSGA 134 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGT+S+RR A +L R D+ V+ FRG ++TRL KL + LA AG+ RL Sbjct: 135 KIGTASVRRAAQVLNRRPDLQVVLFRGNVDTRLRKLAEGEVAGTFLAAAGLSRLGMLDKA 194 Query: 186 KEILNIEDFPPSPGQGAICIETH-----VNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 IL +++ P+ QGAI ++ + + + + +++ + V ERA LA L Sbjct: 195 TRILEVDEMLPAVSQGAIGVQCRDGEASARDAEIRNWLSILDDRPSRLRVTAERAMLATL 254 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A G+ L G+V + DG+ H D +GR + I Sbjct: 255 DGSCRTPIAGHATLGGARLTLSGMVFSLDGQSSHGAVDTSATDDPEALGRTVGEAILARG 314 Query: 301 NKNVF 305 +N Sbjct: 315 GRNFL 319 >gi|167746868|ref|ZP_02418995.1| hypothetical protein ANACAC_01580 [Anaerostipes caccae DSM 14662] gi|167653828|gb|EDR97957.1| hypothetical protein ANACAC_01580 [Anaerostipes caccae DSM 14662] Length = 292 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 102/298 (34%), Positives = 158/298 (53%), Gaps = 6/298 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 ME K RIG+R S LA+A L + P + ++ L T GD+I N+TL +IGG Sbjct: 1 MEPKRLRIGSRESLLAVAQTRLVIEQLKANY--PELSFELVTLKTTGDKILNKTLDKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+++ L+ G ID AVHS KD+P ++ L ++A R D RDV + ++ ++ Sbjct: 59 KGLFVKELDQALLDGRIDMAVHSMKDLPMEISDDLPVAAVPKRGDPRDVLVLPSSGDFEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 VIG+SS RR + R + RG I TRL KL+ + ++++A AG+KR Sbjct: 119 F--GQVIGSSSARRVLQVRRLFPEAEFQSIRGNIHTRLRKLDKGQYSSLIMAAAGLKRAG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I ++E+ P+ GQG +C++ + Q L I+ +T ER+F+ L Sbjct: 177 LKERISRYFSVEEMLPAAGQGTLCVQVRKDFD--QSLFSCIHDRETELVTEAERSFVRAL 234 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 DG C S IA +A GS L G+ + ++S G DA +GR A+ I+ Sbjct: 235 DGGCSSPIAAYAEITGSDLCLTGLYYNAADNTGRKMSITGKAQDAGGLGRRLAEQIQE 292 >gi|309790863|ref|ZP_07685407.1| porphobilinogen deaminase [Oscillochloris trichoides DG6] gi|308227150|gb|EFO80834.1| porphobilinogen deaminase [Oscillochloris trichoides DG6] Length = 353 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 98/333 (29%), Positives = 153/333 (45%), Gaps = 30/333 (9%) Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M +GTR S LA+ + ++ H + + +STKGDRI + L+ +G Sbjct: 15 MSNATKLILGTRGSKLAVTQSGMMADAMRAAHA--GLEVEMQLISTKGDRILDVALSAVG 72 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ--- 116 KGLF +E+E+ L+ ++D VHS KD+P+ + GL ++A+ PR D RD + + Sbjct: 73 DKGLFVKELEQALLDNQVDFCVHSCKDLPSVVPDGLTLAAFPPRADARDALVVMESAVGD 132 Query: 117 ---------SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH 167 L +V+GTSSLRR + R D+ + D RG ++TRL KL + + Sbjct: 133 LDLSNFSMQDSPLLRQGAVVGTSSLRRACQIRAIRPDLDLRDVRGNVDTRLRKLADGQFE 192 Query: 168 AILLAYAGIKRLKKEK------VIKE---------ILNIEDFPPSPGQGAICIETHVNNP 212 AI+LA AG+ RL E + P+ QG + IE + Sbjct: 193 AIILASAGLDRLGFTDATIDGPRHFEAVDARFVALPIPTTQMLPAVSQGILAIECRAADA 252 Query: 213 KAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272 L+ ++H + + ERAFLA L+G C+ IA FA +G L G+V + DG Sbjct: 253 DTISLLGALDHAPSRAAALAERAFLARLEGGCQVPIAAFAVVEGENLRLRGMVGSLDGTT 312 Query: 273 FHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 G+ D IG A+ + ++ Sbjct: 313 QVRGELVGSLADPAAIGLALAEDLISQGASDIL 345 >gi|118474504|ref|YP_891866.1| porphobilinogen deaminase [Campylobacter fetus subsp. fetus 82-40] gi|158512506|sp|A0RNT3|HEM3_CAMFF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|118413730|gb|ABK82150.1| porphobilinogen deaminase [Campylobacter fetus subsp. fetus 82-40] Length = 303 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 102/300 (34%), Positives = 158/300 (52%), Gaps = 6/300 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +I +R S LAL R L+ H++ II + TKGD I + L +IGGKGLFT Sbjct: 3 IKIASRNSALALWQTHHIRDLLIAQ----GHSVEIITMKTKGDVILDTPLAKIGGKGLFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ G D AVHS KD+PT GL+++ RED+RD +S ++L +L + Sbjct: 59 KELENSMLEGSADIAVHSLKDVPTTFPDGLKLACVCSREDVRDAMLSMKYKNLDELPQGA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT+SLRRK +L R+D+ +I RG + +R+ KL N + AI+LA AGI RL K + Sbjct: 119 KVGTTSLRRKMQILAHRADLDIISLRGNVNSRIAKLKNGEFDAIILAMAGINRLNLSKEV 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 K I+ P+ GQGA+ IE ++ + + ++ +N E + ER F+ L+G C+ Sbjct: 179 KFTSAIDT-IPAMGQGALGIEA-IDKKEILDAIEFLNDEKSVVETTIERDFVHTLNGGCQ 236 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + I A KG + I+ DG S+ + G++ A K + Sbjct: 237 APIGINAKLKGDKIEVEAILGLVDGSEILRDSKTYPKLAYKIAGKNFADEFIARGAKELL 296 >gi|215272308|ref|NP_001135813.1| hydroxymethylbilane synthase [Nasonia vitripennis] Length = 356 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 114/342 (33%), Positives = 164/342 (47%), Gaps = 41/342 (11%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+ FR+G+R S LAL L D++ P I+ +STKGD+I N +L +IG K Sbjct: 5 EQNVFRVGSRKSELALIQTEYVIKCLKDLN--PDKEFKIVTMSTKGDKILNISLPKIGEK 62 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS---L 118 LFTEE+E L + +D VHS KD+PT L +GL + A L RED RD + A S L Sbjct: 63 SLFTEELENALENNRVDFLVHSLKDLPTTLREGLALGAILEREDPRDAVVMSKAFSAFTL 122 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176 L SVIGTSSLRR A L R + V + RG + TR KL++ AI+LA AG+ Sbjct: 123 DTLPPGSVIGTSSLRRSAYLARNMPHLKVENIRGNLNTRFKKLDDEKGAYAAIILAVAGL 182 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 KR+ E I + L+ E+ GQGA+ +E +P+ L++ +NH T ER+F Sbjct: 183 KRMGLENRISQYLDSEETLYCVGQGALAVECREVDPRVLSLLEPLNHFHTTLRCVAERSF 242 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG----NRCD-------- 284 L L G C + + + + L G VL+ +GK+ + + D Sbjct: 243 LKYLGGGCSAPVGVSSTLENKELKITGAVLSLNGKVLIKDTLKCKLYMPSDDGEPPKKCP 302 Query: 285 ----------------------AINIGRDAAQYIRFISNKNV 304 A +G+D A+ + + V Sbjct: 303 YREPRTYCGTVPGNMNAISLFGAEQLGKDIAESLIKQNALEV 344 >gi|71275417|ref|ZP_00651703.1| Porphobilinogen deaminase [Xylella fastidiosa Dixon] gi|71898589|ref|ZP_00680760.1| Porphobilinogen deaminase [Xylella fastidiosa Ann-1] gi|170730394|ref|YP_001775827.1| porphobilinogen deaminase [Xylella fastidiosa M12] gi|238059006|sp|B0U2W8|HEM3_XYLFM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|71163717|gb|EAO13433.1| Porphobilinogen deaminase [Xylella fastidiosa Dixon] gi|71731713|gb|EAO33773.1| Porphobilinogen deaminase [Xylella fastidiosa Ann-1] gi|167965187|gb|ACA12197.1| Hydroxymethylbilane synthase [Xylella fastidiosa M12] Length = 305 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 101/300 (33%), Positives = 157/300 (52%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LA+ + + L + P ++V++P+ST+GD I +R+L IGGKGLF Sbjct: 4 LRIATRKSLLAMRQSEYVAARLRML--CPDLDVVLVPMSTRGDEILDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ G+ DCAVHS KD+P L ++A L R+D D IS+ SL+ L + + Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 + TSSLRR+A L +R D+ + D RG + TRL KL+N AI+LA AG++RL E+ + Sbjct: 122 RVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNGDYDAIVLACAGLRRLGLEQRM 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L ++ P+PGQGAI +E+ + + L+ ++ T V ER L GSC Sbjct: 182 TARLAPPEWLPAPGQGAIAVESLTEDARIGTLLAGLDDLPTRQCVVAERTMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + +A + G+V + + +GR AQ + + Sbjct: 242 VPVGAYASYGVGGMRLQGLVGCVADGRLVRAELCSAKDEGDMLGRAVAQCLLDAGAAELL 301 >gi|319792195|ref|YP_004153835.1| porphobilinogen deaminase [Variovorax paradoxus EPS] gi|315594658|gb|ADU35724.1| porphobilinogen deaminase [Variovorax paradoxus EPS] Length = 308 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 104/301 (34%), Positives = 153/301 (50%), Gaps = 9/301 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A ++ L + H + ++ ++T+GD+I +++L+++GGKGLF Sbjct: 11 IVIATRESRLALWQAEHVQALLQER----GHTVSLLGMTTRGDQILDKSLSKVGGKGLFV 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E + G D AVHS KD+P L +G ++ L RED RD +S SL +L + Sbjct: 67 KELETAIEDGRADIAVHSLKDVPMDLPEGFVLACVLEREDPRDAMVSPRYASLDELPHGA 126 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL E I Sbjct: 127 VVGTSSLRRVVLLKARRPDVRIEPLRGNLDTRLRKLDEGQYDAIILAAAGLKRLGLEDRI 186 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + +D P+ GQGA+ IE + EL+ + H W S ERA + GSC Sbjct: 187 RVAFEPDDMLPAAGQGALGIEVRADREDLIELLAPLAHRGDWLSTAAERAVSRAMGGSCS 246 Query: 246 SAIAGFAYCK-GSTLYFYGIVLASDGKI-FHEVSRNGNRCD---AINIGRDAAQYIRFIS 300 +A A + L +G V + D A +G AA +R Sbjct: 247 MPLAAHARWQADGVLRIDAAWGDPEGNAPLVRVHAQADVGDFGRADALGEHAAALLRDAG 306 Query: 301 N 301 Sbjct: 307 A 307 >gi|221065751|ref|ZP_03541856.1| porphobilinogen deaminase [Comamonas testosteroni KF-1] gi|220710774|gb|EED66142.1| porphobilinogen deaminase [Comamonas testosteroni KF-1] Length = 314 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 154/289 (53%), Gaps = 8/289 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LA+ A ++ L H++ ++ ++TKGD+I +R L+++GGKGLF Sbjct: 11 IVIATRESQLAMWQAEHVQAILRGR----GHSVDLLGMTTKGDQILDRALSKVGGKGLFV 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P +L +G ++ + RED RD F+S+ SL +L + Sbjct: 67 KELEVALEEGRADLAVHSLKDVPMELPEGFVLACVMTREDPRDAFVSNRYASLDELPQGA 126 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ALL R D+ + RG + TRL KL+ + AI+LA AG+ RL+ I Sbjct: 127 VVGTSSLRRQALLQALRPDLKIEALRGNVNTRLRKLDEGQYDAIVLAAAGLMRLEMSDRI 186 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + P+ GQGA+ IE + + + + H TW +V ERA + GSC Sbjct: 187 RARFDPAQMLPAAGQGALGIEVRADRQDIIDALAPLAHMPTWLTVTAERAVSRCMGGSCS 246 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNGNRCD---AINIGR 290 +A + + L+ +G K V + + D A +G Sbjct: 247 MPLAAYGRFESDILHMDAAWGDMEGDKGLVRVQASASVTDFASANALGE 295 >gi|50557014|ref|XP_505915.1| YALI0F26609p [Yarrowia lipolytica] gi|55976378|sp|Q6C097|HEM3_YARLI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|49651785|emb|CAG78727.1| YALI0F26609p [Yarrowia lipolytica] Length = 338 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 95/312 (30%), Positives = 155/312 (49%), Gaps = 15/312 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +G R S LAL + L VH P ++ ++ L+T GD++ ++ L GK L+T+E Sbjct: 21 VGGRKSKLALVQTQHVAAMLKKVH--PDYSFPVLGLTTLGDQVQSKPLYSFDGKALWTKE 78 Query: 68 IEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119 +E L+ + D VHS KDMPT L G ++ A L RED RD + ++L Sbjct: 79 LETLLLEKVPGFDQQDIIVHSLKDMPTVLPDGCELGAILTREDPRDALVMAAGSPYKTLA 138 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGIK 177 DL SV+GTSS+RR A L + + RG + TRL+KL++ + ++LA AG+K Sbjct: 139 DLPAGSVVGTSSIRRSAQLKKSYPGLVYESVRGNVGTRLSKLDDPETPYKCLILAAAGLK 198 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I L D + GQGA+ +E + K +++++ I +++ ERA + Sbjct: 199 RLDLGDRITGYLQKPDMLHAVGQGALGLEIRQGDEKTKKILEAIYDKESTLCCLAERAVM 258 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQ 294 L+G C I + L IV++ +G F E ++ +A +G+D A+ Sbjct: 259 RTLEGGCSVPIGVETKYENGKLTLDAIVVSVEGTEFVECTQVRAVEENWEAEQLGKDVAE 318 Query: 295 YIRFISNKNVFN 306 + K + + Sbjct: 319 QLVKDGAKKILD 330 >gi|168188066|ref|ZP_02622701.1| porphobilinogen deaminase [Clostridium botulinum C str. Eklund] gi|169294098|gb|EDS76231.1| porphobilinogen deaminase [Clostridium botulinum C str. Eklund] Length = 300 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 105/298 (35%), Positives = 157/298 (52%), Gaps = 6/298 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +G+R S LAL + + + P + +STKGDRI + L +IG KGLF Sbjct: 2 KIVVGSRGSKLALTQTNWIINEIKQNY--PQIQFEVKIISTKGDRIQHIALDKIGDKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLAL 123 +EIE++LISGEID AVHS KDM T + + L+ S RED RDV I + S+ +L + Sbjct: 60 VKEIEEQLISGEIDMAVHSMKDMSTDIPEELKFSYVPKREDYRDVLILNKKYNSIDELPM 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++ IGT S RR+ LL++R D++++ RG +ETR+NK+ H ++LA AGIKRL E+ Sbjct: 120 NARIGTGSKRRRYQLLQYRDDLNIVPIRGNVETRINKIETENLHGVVLAVAGIKRLNIEE 179 Query: 184 VIKE---ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + LN PSP QG + +E + ++++K I ++ ERAFL + Sbjct: 180 KLDYNIFYLNENIMLPSPAQGILALEIKKHREDLEKILKSIEDRNSTIQAIAERAFLKGV 239 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +G C I + G++ DG S G DA IG + A+ + Sbjct: 240 NGGCHVPIGAICNINKDNIEVTGLLGKEDGSKIIRKSLGGKIEDAEKIGYELAEIVLK 297 >gi|57167590|ref|ZP_00366730.1| porphobilinogen deaminase [Campylobacter coli RM2228] gi|57020712|gb|EAL57376.1| porphobilinogen deaminase [Campylobacter coli RM2228] Length = 308 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 95/304 (31%), Positives = 150/304 (49%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL + L + H+ +++ TKGD + + L +IGGKGL Sbjct: 2 KELVIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L Sbjct: 59 FTKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGT+SLRRK LL R D+ +I RG + +R+ KL N AI+LA AGIKRL +K Sbjct: 119 GAKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNGDFDAIILAMAGIKRLDLDK 178 Query: 184 --VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ P+ QGA+ IE+ +++ + E +K +N ++ ER F++ L+ Sbjct: 179 QVNFVYTFSKDELIPAASQGALGIES-IDDEQILEFLKCLNDDNALIETTIEREFISTLE 237 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I A + I+ DG + R + + G A+ Sbjct: 238 GGCQVPIGINAELLNDEICVRAILGLPDGSEILKEKRMIKKSEFKGFGESLAKEFIAKGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KEIL 301 >gi|302388903|ref|YP_003824724.1| hydroxymethylbilane synthase [Thermosediminibacter oceani DSM 16646] gi|302199531|gb|ADL07101.1| hydroxymethylbilane synthase [Thermosediminibacter oceani DSM 16646] Length = 299 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 105/293 (35%), Positives = 169/293 (57%), Gaps = 5/293 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+G+R S LAL L D + P ++ + T+GD++ + L++ GGKG+ Sbjct: 6 RIVRVGSRESRLALVQTEIVIRLLKD--RRPELEFEVVKIKTQGDKLLDVNLSDAGGKGV 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L++G ID AVHS KD+P +L +GL I+A RED RDV IS + L +L Sbjct: 64 FVKEIEEALLAGSIDLAVHSMKDVPYELPEGLCIAAVTEREDPRDVLISRDKRRLLNLRP 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSSLRR L R D+ ++ RG + TR+ K+++ + ++LA AGIKRL E+ Sbjct: 124 GARIGTSSLRRSVQLKALRPDLDIVPVRGNVPTRIRKMDDLELDGLVLAAAGIKRLGLEE 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +I E E P+ GQGA+ +E ++ EL +++H+ T +V ER+F+ L GS Sbjct: 184 LIAEYFPPEVIVPAVGQGALAVEARKDD-DILELAGLVSHKATEVAVRAERSFMRALGGS 242 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ + FA +G+ + G+V +G + + + +G +A IG A+ + Sbjct: 243 CRVPLGAFARVEGTVVTLVGMV-EKNGSV-CKGTMSGKLKEAEEIGLRLAERL 293 >gi|257459674|ref|ZP_05624783.1| porphobilinogen deaminase [Campylobacter gracilis RM3268] gi|257443099|gb|EEV18233.1| porphobilinogen deaminase [Campylobacter gracilis RM3268] Length = 309 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 104/304 (34%), Positives = 152/304 (50%), Gaps = 7/304 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL + S L + + TKGD+I + L +IGGKGL Sbjct: 2 KNLIIATRGSVLALWQSKHIASLLNAR----GIQAQLKSMKTKGDKILDTPLAKIGGKGL 57 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E+ ++ GE AVHS KD+P + +GL ++A RED+RD IS +L Sbjct: 58 FTKELEESMLRGESHIAVHSLKDVPVEFPQGLVLAAICAREDVRDAMISEKYSKFDELPR 117 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GT+SLRRK LL R D+ VI RG ++TRL KL + + AI+LA AGI RL Sbjct: 118 GAKVGTTSLRRKMQLLSMRPDLEVISLRGNVQTRLRKLKDGEFDAIILAMAGINRLNLRA 177 Query: 184 VIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +K + E P+ GQGA+ IE V+ P+ ++ + E ER F+ L+ Sbjct: 178 EVKHVAPFEISQMIPAMGQGALGIEA-VDEPQILRAIEFLKDERAIIETTVERDFVRVLE 236 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I A +G ++ IV DG S + ++G + A+ Sbjct: 237 GGCQVPIGINARLEGENIHISAIVGLPDGSESIRQSIVAQKSQYQSVGAELARVFIEKGA 296 Query: 302 KNVF 305 K + Sbjct: 297 KQLL 300 >gi|322695309|gb|EFY87119.1| porphobilinogen deaminase [Metarhizium acridum CQMa 102] Length = 327 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 106/319 (33%), Positives = 158/319 (49%), Gaps = 15/319 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +GTR SPLA+A A +SL V P + I ++T GDR N L GG Sbjct: 1 MAPSTITVGTRKSPLAMAQAELVVASLQSV--FPSSSFPIHGMTTTGDRDQNTALYNFGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT------ 114 KGL+T ++E+KL++ E+D VHS KDMPT L + A RED RDV + Sbjct: 59 KGLWTTQLEEKLVARELDIVVHSLKDMPTTLPSDCTLGAVTKREDPRDVLVLKKALRDAN 118 Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLA 172 ++L DL SVIGTSS+RR A L R + D RG I+TRL KL+ + + AI+LA Sbjct: 119 GYKTLADLPDGSVIGTSSIRRIAQLARRYPALRFKDVRGNIQTRLKKLDEDPELSAIVLA 178 Query: 173 YAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 AG+ R+ + I + L++++ + GQGA+ +E + + +K I H DT + Sbjct: 179 AAGLLRMDLGEHISQYLDVDNGGILHAVGQGALGVECRAGDEQVLRALKEIEHRDTLLAC 238 Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV---SRNGNRCDAIN 287 ER+ + EL+G C I L V++ GK + + +A Sbjct: 239 LAERSLMRELEGGCSVPIGVETKWADGKLRLRATVVSVTGKEGVDADVLETVTSEEEATE 298 Query: 288 IGRDAAQYIRFISNKNVFN 306 +G+ AQ + + + Sbjct: 299 LGKRVAQDLVSRGADKILD 317 >gi|322712674|gb|EFZ04247.1| porphobilinogen deaminase [Metarhizium anisopliae ARSEF 23] Length = 327 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 104/319 (32%), Positives = 158/319 (49%), Gaps = 15/319 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +GTR SPLA+A A +SL + P + I ++T GDR N L GG Sbjct: 1 MAPSTITVGTRKSPLAMAQAELVVASLQSI--FPSSSFPIHGMTTTGDRDQNTALYNFGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT------ 114 KGL+T ++E+KL++ E+D VHS KDMPT L + A RED RDV + Sbjct: 59 KGLWTTQLEEKLVARELDIVVHSLKDMPTTLPSDCTLGAVTKREDPRDVLVLKKALRDAN 118 Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLA 172 ++L DL SVIGTSS+RR A L R + D RG I+TRL KL+ + + AI+LA Sbjct: 119 GYKTLADLPDGSVIGTSSIRRIAQLARRYPALRFKDVRGNIQTRLKKLDEDPELSAIVLA 178 Query: 173 YAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 AG+ R+ + I + L++++ + GQGA+ +E + +K I H+DT + Sbjct: 179 AAGLLRMDLGEHISQYLDVDNGGILHAVGQGALGVECRAGDEHVLRALKEIEHKDTLLAC 238 Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV---SRNGNRCDAIN 287 ER+ + EL+G C I L V++ GK + + +A Sbjct: 239 LAERSLMRELEGGCSVPIGVETRWVDGKLRLRATVVSVTGKEGVDADVLETVTSEEEAEE 298 Query: 288 IGRDAAQYIRFISNKNVFN 306 +G+ A+ + + + Sbjct: 299 LGKRVARDLVSRGADKILD 317 >gi|32267226|ref|NP_861258.1| porphobilinogen deaminase [Helicobacter hepaticus ATCC 51449] gi|39931411|sp|Q7VFE9|HEM3_HELHP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|32263279|gb|AAP78324.1| porphobilinogen deaminase [Helicobacter hepaticus ATCC 51449] Length = 321 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 103/309 (33%), Positives = 161/309 (52%), Gaps = 10/309 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + IG+R S LAL A +S L I + T+GD+I + L +IGGKGL Sbjct: 9 RELVIGSRGSILALWQAEYIKSCLKAQC---GLQSRIQIIKTRGDKILDVPLAKIGGKGL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E+ L+S +ID AVHS KD+P + + L ++A RE D F+S +L L Sbjct: 66 FTKELEEMLLSKDIDLAVHSLKDVPVEFVPELDLAAITQRESANDCFLSVNYPNLNALPQ 125 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 + +GT+SLRR + ++RSD+ + RG ++TRL KL+N AI+LA AG+ RLK Sbjct: 126 GAKVGTTSLRRSMQIKKYRSDLDTLSLRGNVQTRLEKLHNGAFDAIILAQAGVNRLKINT 185 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + ++ I+ ++ P+ GQGA+ IE ++ + V+N + + V+ ERAF+ L+G Sbjct: 186 QDVRYIVPLDFMIPAMGQGALGIEMRKDSIFFDR-IAVLNDKQSALCVSAERAFVRTLEG 244 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-----GNRCDAINIGRDAAQYIR 297 C+ I +A + L IV DG + S + + N+G AQ Sbjct: 245 GCQVPIGVYAQFSNNKLTLQAIVGLPDGSEVLQDSVEDSINIDDINASENLGIAFAQKFI 304 Query: 298 FISNKNVFN 306 K + Sbjct: 305 DKGAKELLE 313 >gi|86148990|ref|ZP_01067222.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni CF93-6] gi|86153229|ref|ZP_01071433.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni HB93-13] gi|88597145|ref|ZP_01100381.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 84-25] gi|218562197|ref|YP_002343976.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|12643831|sp|Q9PHW9|HEM3_CAMJE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|85840348|gb|EAQ57605.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni CF93-6] gi|85842955|gb|EAQ60166.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni HB93-13] gi|88190834|gb|EAQ94807.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 84-25] gi|112359903|emb|CAL34691.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315927042|gb|EFV06397.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315928698|gb|EFV07978.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 305] Length = 307 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 101/303 (33%), Positives = 153/303 (50%), Gaps = 6/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LAL + L + H+ +++ TKGD + + L +IGGKGLF Sbjct: 2 KLIIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L Sbjct: 59 TKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183 + IGT+SLRRK LL R D+ +I RG + +R+ KL NN AI+LA AGIKRL +K Sbjct: 119 AKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQ 178 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + ++ P+ QGA+ IE+ +N+ K EL+K +N E+ + ER F+A L+G Sbjct: 179 VNFVYEFSKDELIPAASQGALGIES-INDEKILELLKCLNDENALIETSIEREFIATLEG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I A G + ++ DG + R + D G A+ K Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIKKNDFKGFGESLAKEFIAKGAK 297 Query: 303 NVF 305 + Sbjct: 298 ELL 300 >gi|241952386|ref|XP_002418915.1| hydroxymethylbilan synthase, putative; porphobilinogen deaminase, putative; pre-uroporphyrinogen synthase, putative [Candida dubliniensis CD36] gi|223642254|emb|CAX44222.1| hydroxymethylbilan synthase, putative [Candida dubliniensis CD36] Length = 340 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 94/314 (29%), Positives = 151/314 (48%), Gaps = 19/314 (6%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG R S LA+ + + ++ D P + I+ LST GD++ + L GGK L+T+E Sbjct: 16 IGGRKSKLAVVQSEIVKKAIED--TFPNLSCSILALSTLGDKVQTQPLYTFGGKSLWTKE 73 Query: 68 IEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119 +E L+ ++D VHS KDMPT L + ++ RED RD + +SLK Sbjct: 74 LEILLLDSVDEFPQLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAIVMKQGSSYKSLK 133 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIK 177 DL +++GTSS+RR + L++ + RG I+TRLNKL NN+ ++LA AG+ Sbjct: 134 DLPAGAIVGTSSIRRSSQLIKNYPHLRFESVRGNIQTRLNKLDQPNNEYCCLILASAGLI 193 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I L +D + GQGA+ IE + + ++K I ER+ + Sbjct: 194 RLGLGHRITSYL--DDMYYAVGQGALGIEIRKGDDNIKSILKKIEDPIATICCLAERSLM 251 Query: 238 AELDGSCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDA 292 L+G C + + S L GI+++ DG + E + R D +G + Sbjct: 252 RYLEGGCSVPLGVHSDYNESKQELTLKGIIVSPDGTVSIEDQVIKRITCDEDCEQVGIEL 311 Query: 293 AQYIRFISNKNVFN 306 ++ K + + Sbjct: 312 GDKLKAKGAKEILD 325 >gi|91084135|ref|XP_967479.1| PREDICTED: similar to porphobilinogen deaminase [Tribolium castaneum] gi|270006650|gb|EFA03098.1| hypothetical protein TcasGA2_TC013007 [Tribolium castaneum] Length = 460 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 108/284 (38%), Positives = 151/284 (53%), Gaps = 12/284 (4%) Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + + R+G+R S LAL S L +H P + I+ +ST GD++ + L +IG Sbjct: 1 MSEIEKIRVGSRKSELALIQTRHVISLLKKIH--PGKDFEIVTMSTLGDKVLDIPLPKIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQ 116 K LFT+E+E L +G +D VHS KD+PT L G+ I A L RED RD + H Sbjct: 59 EKSLFTKELEAALSTGCVDFVVHSLKDLPTVLPPGMAIGAVLTREDPRDALVLQKDHDKY 118 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAG 175 L+ L SVIGTSSLRR A L R + V RG + TRL KL+ K AI+LA AG Sbjct: 119 LLETLPEGSVIGTSSLRRGAQLARKYPHLKVESIRGNLNTRLKKLDELGKYQAIILASAG 178 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + R+ I +IL+ ++ + GQGA+ +E ++ K EL+K + T V ER+ Sbjct: 179 LIRMGWTSRISKILDSDELLYAVGQGALAVECRESDEKTIELLKPLYDVQTALRVISERS 238 Query: 236 FLAELDGSCKSAIAG---FAYCKGS--TLYFYGIVLASDGKIFH 274 FL L G C + +A + K + TL G V + DGK Sbjct: 239 FLKTLGGGCSAPVAVSSDLSRLKDNKHTLKLKGAVWSLDGKEEI 282 >gi|326792716|ref|YP_004310537.1| porphobilinogen deaminase [Clostridium lentocellum DSM 5427] gi|326543480|gb|ADZ85339.1| porphobilinogen deaminase [Clostridium lentocellum DSM 5427] Length = 301 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 111/304 (36%), Positives = 157/304 (51%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IGTR S LAL L + P + + TKGD I ++ L +IG KG+F Sbjct: 2 KVVIGTRGSRLALTQTKWVIDELEKHY--PELACEMKIIKTKGDLIQDKPLDKIGDKGIF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKDLAL 123 T+EIE +L+ G ID AVHS KDMP++L GL+ + L RED RDV I S++DL + Sbjct: 60 TKEIEAELLKGNIDMAVHSMKDMPSELPLGLRFTRTLKREDARDVLILKEGYASIEDLPI 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + I T S RRK LL +RSD++++ RG ++TRL KL K I+LA AG+ RL Sbjct: 120 GATIATGSKRRKYQLLAYRSDLNIVPIRGNVDTRLCKLEEEKLEGIVLAAAGLHRLGLAD 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I L +E P+P QGA+ IE + KA +LVKV+ + V ERAF+ ++G Sbjct: 180 KITCYLPMEIMLPAPAQGALAIEIRQEDTKAYDLVKVLEDPVSSIQVEAERAFMDAINGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C I + G+ L G++ GK +G + A +R KN Sbjct: 240 CHMPIGAYCEVIGTKLRMRGLLGDELGKKLVIKELCAPIGSEKQLGEELASVLRKEFEKN 299 Query: 304 VFNF 307 ++ Sbjct: 300 --DW 301 >gi|68483293|ref|XP_714388.1| likely phorphobilinogen deaminase Hem3p [Candida albicans SC5314] gi|68483380|ref|XP_714346.1| likely phorphobilinogen deaminase Hem3p [Candida albicans SC5314] gi|10720013|sp|O94048|HEM3_CANAL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|3859661|emb|CAA21999.1| Porphobilinogen deaminase [Candida albicans] gi|46435905|gb|EAK95277.1| likely phorphobilinogen deaminase Hem3p [Candida albicans SC5314] gi|46435949|gb|EAK95320.1| likely phorphobilinogen deaminase Hem3p [Candida albicans SC5314] gi|238883889|gb|EEQ47527.1| porphobilinogen deaminase [Candida albicans WO-1] Length = 340 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 94/314 (29%), Positives = 149/314 (47%), Gaps = 19/314 (6%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG R S LA+ + + + D P + I+ LST GD++ + L GGK L+T+E Sbjct: 16 IGGRKSKLAVVQSEIVKKVIED--TFPNLSCSILALSTLGDKVQTQPLYTFGGKSLWTKE 73 Query: 68 IEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119 +E L+ ++D VHS KDMPT L + ++ RED RD + +SLK Sbjct: 74 LEILLLDSVDEFPKLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAIVMKQGSSYKSLK 133 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIK 177 DL +++GTSS+RR + L++ + RG I+TRLNKL NN+ ++LA AG+ Sbjct: 134 DLPAGAIVGTSSIRRSSQLIKNYPHLRFESVRGNIQTRLNKLDQPNNEYCCLILASAGLI 193 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I L +D + GQGA+ IE + + ++K I ER+ + Sbjct: 194 RLGLGHRITSYL--DDMYYAVGQGALGIEIRKGDDNIKSILKKIEDPIATICCLAERSLM 251 Query: 238 AELDGSCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVS---RNGNRCDAINIGRDA 292 L+G C + + S L GI+++ DG + E R D +G + Sbjct: 252 RYLEGGCSVPLGVHSDYNESKQELTLKGIIVSPDGTVSIEDEVIKRITCDEDCEQVGIEL 311 Query: 293 AQYIRFISNKNVFN 306 ++ K + + Sbjct: 312 GDKLKAKGAKEILD 325 >gi|149921672|ref|ZP_01910121.1| porphobilinogen deaminase [Plesiocystis pacifica SIR-1] gi|149817516|gb|EDM76986.1| porphobilinogen deaminase [Plesiocystis pacifica SIR-1] Length = 322 Score = 325 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 106/310 (34%), Positives = 161/310 (51%), Gaps = 4/310 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 + + R+GTR S LAL A R L+ + ++ + TKGDR+T+R L ++GG Sbjct: 6 LAARKLRLGTRGSALALWQANMIRDRLLAAWGAQGLEVELVRVVTKGDRVTDRPLNQVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ--SL 118 GLF + +E KL++GEID AVHS KDMP L +GL +++ R D RD F++ + +L Sbjct: 66 MGLFVKGLEDKLLAGEIDFAVHSMKDMPGTLPEGLTLASTPERADPRDAFLAAPGRDVTL 125 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L S +GTSSLRR AL R + ++ RG + TR+ K+ + A+LLA AG+ R Sbjct: 126 ATLPAGSRLGTSSLRRGALAKRINPGLEIVPIRGNVPTRMGKIAEGEVDAVLLAAAGLDR 185 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L K + I E L+ + F P+ QG + IE + L + + H T ER++LA Sbjct: 186 LGKGEAITERLDPDAFMPAACQGVLAIELRAADTDIAALFEPLGHGPTSIVAAAERSYLA 245 Query: 239 ELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L G C+ +A A G + G+V+ DG + G DA +G A+ + Sbjct: 246 TLQGGCQVPLACHARLSEDGRRVRVEGLVVEPDGSTVYASEAEGPVADAAQLGAGVAREV 305 Query: 297 RFISNKNVFN 306 + V + Sbjct: 306 LAAGGQGVID 315 >gi|289615845|emb|CBI57434.1| unnamed protein product [Sordaria macrospora] Length = 338 Score = 325 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 99/321 (30%), Positives = 153/321 (47%), Gaps = 18/321 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K+ IGTR S LAL ++L H P + + L+T GD+ +L +G K Sbjct: 5 QKQTVHIGTRRSALALRQVDLVIAALQPHH--PNVHFQVHALATLGDKNQTASLPSLG-K 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT------- 114 GL+T E+E KL + E+D VH KD+PT L +G +I RED RDV + Sbjct: 62 GLWTNELEAKLFNNEVDFIVHCLKDVPTTLPEGGKIGVVTEREDPRDVVVMKKKWAEQGK 121 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 + L DL +++GTSS+RR A L R + D RG IETR+ K + I+LA A Sbjct: 122 YKVLADLPEGAIVGTSSVRRAAQLRRQYPGLVFKDVRGNIETRMRKCDEEDYDCIILAAA 181 Query: 175 GIKRLKKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 G+ R+ ++ I + L+ + GQGA+ +E + K E++K + HE T + Sbjct: 182 GLLRMGYDERIAQWLDSTTEGGGMLHAVGQGALAMEIREGDEKTLEIIKPLCHEKTMVAT 241 Query: 231 NCERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAI 286 ERA + L+G C I + L V++ DGK + V +A Sbjct: 242 FAERAVMRSLEGGCSVPIGVETKWVEDDKLQLKATVVSLDGKESVDGQSVEVVKTTEEAE 301 Query: 287 NIGRDAAQYIRFISNKNVFNF 307 +GR A+ + + + + Sbjct: 302 EMGRKLAEDLAKRGAQKILDV 322 >gi|221199353|ref|ZP_03572397.1| porphobilinogen deaminase [Burkholderia multivorans CGD2M] gi|221205745|ref|ZP_03578760.1| porphobilinogen deaminase [Burkholderia multivorans CGD2] gi|221174583|gb|EEE07015.1| porphobilinogen deaminase [Burkholderia multivorans CGD2] gi|221180638|gb|EEE13041.1| porphobilinogen deaminase [Burkholderia multivorans CGD2M] Length = 333 Score = 325 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 108/304 (35%), Positives = 165/304 (54%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 76 VKELESALADGRADLAVHSLKDVPMMLPDGFALAAIMQREDPRDAFVSNDYASLDALPAG 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E Sbjct: 136 AVVGTSSLRREAMLRARYPHLQVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEAR 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++ED PP+ GQGA+ IE + ++ ++ T +V ER L GSC Sbjct: 196 IRALLDVEDSPPAAGQGALGIEIAAHRADVAAWLEPLHDAQTALAVEAERMVSRALGGSC 255 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301 + +A A + LY G V DG + DA+ +GR + + Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTIDGTRVLTAEECASVVTVADALALGRAVSDELEAQGA 315 Query: 302 KNVF 305 + Sbjct: 316 LEIV 319 >gi|189351191|ref|YP_001946819.1| porphobilinogen deaminase [Burkholderia multivorans ATCC 17616] gi|189335213|dbj|BAG44283.1| hydroxymethylbilane synthase [Burkholderia multivorans ATCC 17616] Length = 333 Score = 325 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 108/304 (35%), Positives = 165/304 (54%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 76 VKELESALADGRADLAVHSLKDVPMMLPDGFALAAIMQREDPRDAFVSNDYASLDALPAG 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E Sbjct: 136 AVVGTSSLRREAMLRARYPQLQVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEAR 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++ED PP+ GQGA+ IE + ++ ++ T +V ER L GSC Sbjct: 196 IRALLDVEDSPPAAGQGALGIEIAAHRTDVAAWLEPLHDAQTALAVEAERMVSRALGGSC 255 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301 + +A A + LY G V DG + DA+ +GR + + Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTIDGTRVLTAEECASVVTVADALALGRAVSDELEAQGA 315 Query: 302 KNVF 305 + Sbjct: 316 LEIV 319 >gi|190683048|gb|ACE81820.1| hydroxymethylbilane synthetase [Oxyrrhis marina] Length = 395 Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats. Identities = 128/301 (42%), Positives = 180/301 (59%), Gaps = 3/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLALA A + S + + I I +ST+GDRI +R L ++GGKGLFT Sbjct: 76 LRIGTRGSPLALAQARDVESRAREQLQQGG-EIDICVISTEGDRILDRALADVGGKGLFT 134 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+++ L+SGE+DC VHS KD+PT + G +I AYLPRED RDVF+S +L DL + Sbjct: 135 KELDRALLSGEVDCCVHSMKDVPTTVAPGTEIVAYLPREDTRDVFLSAKYATLADLPDGA 194 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GT+SLRR+A +L ++ V +FRG ++TRL KL LAYAG+KRL Sbjct: 195 VVGTASLRRQAQILAQ-KNVVVTNFRGNVQTRLRKLAAGTVDCTFLAYAGLKRLGMLAEA 253 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++L D P+ QGA+ I+ N+ + + ++HE T +V ERAFL LDGSC+ Sbjct: 254 TQVLEWSDMLPAIAQGAVGIQIRSNDAALRGTLSQLDHEPTRLAVETERAFLRALDGSCR 313 Query: 246 SAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + IAG A+ S L F G VL++DGK E + CD +G+ +R + + Sbjct: 314 TPIAGQAWIGPDSRLAFRGQVLSADGKQRFERVGDCLPCDGPELGKTLGDDLRREAGEEF 373 Query: 305 F 305 F Sbjct: 374 F 374 >gi|57238255|ref|YP_178664.1| porphobilinogen deaminase [Campylobacter jejuni RM1221] gi|121612975|ref|YP_001000245.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 81-176] gi|148925915|ref|ZP_01809602.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni CG8486] gi|167005201|ref|ZP_02270959.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 81-176] gi|205355401|ref|ZP_03222172.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni CG8421] gi|81557551|sp|Q5HVM1|HEM3_CAMJR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|158513884|sp|A1VYQ4|HEM3_CAMJJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|57167059|gb|AAW35838.1| porphobilinogen deaminase [Campylobacter jejuni RM1221] gi|87250005|gb|EAQ72963.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 81-176] gi|145844901|gb|EDK22005.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni CG8486] gi|205346635|gb|EDZ33267.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni CG8421] gi|284925807|gb|ADC28159.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni IA3902] gi|315057963|gb|ADT72292.1| Porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni S3] Length = 307 Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats. Identities = 101/303 (33%), Positives = 153/303 (50%), Gaps = 6/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LAL + L + H+ +++ TKGD + + L +IGGKGLF Sbjct: 2 KLIIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L Sbjct: 59 TKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183 + IGT+SLRRK LL R D+ +I RG + +R+ KL NN AI+LA AGIKRL +K Sbjct: 119 AKIGTTSLRRKMQLLLLRPDLDIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQ 178 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + ++ P+ QGA+ IE+ +N+ K EL+K +N E+ + ER F+A L+G Sbjct: 179 VNFVYEFSKDELIPAASQGALGIES-INDEKILELLKCLNDENALIETSIEREFIATLEG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I A G + ++ DG + R + D G A+ K Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIKKNDFKGFGESLAKEFIAKGAK 297 Query: 303 NVF 305 + Sbjct: 298 ELL 300 >gi|317498182|ref|ZP_07956483.1| porphobilinogen deaminase [Lachnospiraceae bacterium 5_1_63FAA] gi|316894537|gb|EFV16718.1| porphobilinogen deaminase [Lachnospiraceae bacterium 5_1_63FAA] Length = 312 Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats. Identities = 112/304 (36%), Positives = 161/304 (52%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 + IG+R S LAL + L + P H I + TKGD+I N+ L +IGGKGLF Sbjct: 2 KYIIGSRGSRLALIQTKYVQEKLAKAY--PEHTFEIQIIKTKGDKIQNKPLDKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE+K+ISGEI VHS KDMP+ KGL + RED RDV I TA+ L +L Sbjct: 60 VKEIEEKIISGEIHMGVHSMKDMPSTPAKGLVFTKVWKREDPRDVLILRTAKHLSELREG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +VI T S RR LL+ R D+ +I+ RG ++TRL K+ + I+LA AG+KRL E V Sbjct: 120 AVIATGSKRRAFQLLKLRPDLQIINIRGNVDTRLRKMEEQQLDGIVLAAAGLKRLGMEDV 179 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + L ED +P QGA+ +E + + Q+++ V E+T + V ER FL ++ GSC Sbjct: 180 ITQYLAPEDMISAPAQGALALEVREDQKELQKMLDVFCDEETMNEVCAERNFLEQMGGSC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN- 303 + Y + DG G + + A + I+ + +N Sbjct: 240 HTPAGARCQKTDQGYELYAMFGNEDGSKQAYTKVYGTC--PEILAQTAVKNIKKTAGRNR 297 Query: 304 VFNF 307 +FN+ Sbjct: 298 IFNW 301 >gi|222823771|ref|YP_002575345.1| porphobilinogen deaminase [Campylobacter lari RM2100] gi|254800239|sp|B9KGA9|HEM3_CAMLR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|222538993|gb|ACM64094.1| porphobilinogen deaminase [Campylobacter lari RM2100] Length = 308 Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats. Identities = 100/302 (33%), Positives = 161/302 (53%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL + ++ L H I + TKGD + + L +IGGKGLFT Sbjct: 3 LIIATRKSQLALWQSEYIKNKLSQTHS--DLEISLEGFKTKGDVLLDSPLAKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ ++ G+ AVHS KD+P+ KGL ++A RE++ D F+S +SL L + Sbjct: 61 KELEESMLRGDSHLAVHSLKDVPSFFPKGLVLAAISKREEVNDAFLSEYYESLNALPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT+SLRR+ LL R D+++I RG I +RL KL + AI+LA+AGIKRL EK I Sbjct: 121 KVGTTSLRRRMQLLALRPDLNIISLRGNINSRLEKLKAKEFDAIILAFAGIKRLGLEKQI 180 Query: 186 K--EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 K + +++ P+ QGA+ IE+ +++ + + ++ +N ++ + + ER F+ L+G Sbjct: 181 KFVKKFELDEMIPAASQGALGIES-IDDKQILKYLECLNDKNAFVETHIERDFIKTLEGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I A + IV D + R ++ D G A+ + K Sbjct: 240 CQVPIGINAKIIDEKIEIRAIVGLPDASKILKEKRMIDKQDYAKAGELLAKEMIAKGAKE 299 Query: 304 VF 305 + Sbjct: 300 IL 301 >gi|260941880|ref|XP_002615106.1| hypothetical protein CLUG_05121 [Clavispora lusitaniae ATCC 42720] gi|238851529|gb|EEQ40993.1| hypothetical protein CLUG_05121 [Clavispora lusitaniae ATCC 42720] Length = 356 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 95/314 (30%), Positives = 156/314 (49%), Gaps = 17/314 (5%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG R S LA+ + ++ + P + I+ L+T GD++ N+ L GGK L+T+E Sbjct: 18 IGGRKSRLAVVQSEFVKAGIEA--NFPELSCSILALNTLGDKVQNKPLYSFGGKSLWTKE 75 Query: 68 IEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 +E L+ ++D VHS KDMPT L ++ + RED RD + +SL Sbjct: 76 LEILLLEAVGDYPQLDMIVHSLKDMPTNLPDEFELGCIVEREDPRDALVVKKGLPFRSLS 135 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIK 177 DL +V+GTSS+RR A LL+ + D RG I TRL+KL++ + ++LA +G+ Sbjct: 136 DLPPGAVVGTSSIRRSAQLLKNYPHLRFEDMRGNIATRLSKLDDPSSPFTCLILAASGLL 195 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I L+ D + GQGA+ IE ++ +++ + H + ERA + Sbjct: 196 RLGLGDRISAPLDAPDMYYAVGQGALGIEIRKDDTVMLSVLRKLEHLPSAYCCYAERAMM 255 Query: 238 AELDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDA 292 L+G C + + LYF GI+++ DGK E N+ +A +G + Sbjct: 256 RMLEGGCSVPLGVKTHYNEQTQQLYFKGIIVSPDGKQSVEAEHTSIIYNKAEAEAVGEEV 315 Query: 293 AQYIRFISNKNVFN 306 A+ + + K + + Sbjct: 316 ARKLTHLGGKKILD 329 >gi|120437548|ref|YP_863234.1| porphobilinogen deaminase [Gramella forsetii KT0803] gi|117579698|emb|CAL68167.1| porphobilinogen deaminase [Gramella forsetii KT0803] Length = 305 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 96/304 (31%), Positives = 161/304 (52%), Gaps = 9/304 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A + +L H ++P+ + GD ++ L E+G Sbjct: 1 MS-KVIRIGTRDSELALWQAKTVQKALEST----GHQTELVPVKSTGDLNLDQPLYEMGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ +I+G++D AVHS KD+PT L KG+ +A + R + +D + H + Sbjct: 56 TGIFTKTLDVAMINGDVDIAVHSMKDVPTALPKGIVEAAIMKRANSKD-LLIHKGVEFLE 114 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 I T SLRRKA L + V+D RG + TR+ KLN+N + + A AG++R++ Sbjct: 115 NEEG-TIATGSLRRKAQWLHKYPNHKVVDLRGNVNTRMQKLNDNNWNGAIFAAAGLERIE 173 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + +++ P+P QGA+ I + + + V+NH+++ V+ ER FL L Sbjct: 174 IKPEN--FIDLNWMIPAPAQGAMLIVAMEEDEYCRRALSVLNHKESELCVHVEREFLKTL 231 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C + I A + ++F+G + + DGK EV R+ + ++G++ AQ I Sbjct: 232 EGGCTAPIGALAKILNNHVHFHGALFSLDGKKKMEVERSLPVAEIEDMGKECAQEILKNG 291 Query: 301 NKNV 304 K + Sbjct: 292 GKEL 295 >gi|157414826|ref|YP_001482082.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 81116] gi|172047086|sp|A8FKW8|HEM3_CAMJ8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157385790|gb|ABV52105.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 81116] gi|307747464|gb|ADN90734.1| Porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni M1] gi|315931740|gb|EFV10695.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 327] Length = 307 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 101/303 (33%), Positives = 153/303 (50%), Gaps = 6/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LAL + L + H+ +++ TKGD + + L +IGGKGLF Sbjct: 2 KLIIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L Sbjct: 59 TKELEESMLRKEAHLAVHSLKDVPSFFPRGLVLAAVSKREQSNDAMLSQNYKDFLSLPKG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183 + IGT+SLRRK LL R D+ +I RG + +R+ KL NN AI+LA AGIKRL +K Sbjct: 119 AKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQ 178 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + ++ P+ QGA+ IE+ +N+ K EL+K +N E+ + ER F+A L+G Sbjct: 179 VNFVYEFSKDELIPAASQGALGIES-INDEKILELLKCLNDENALIETSIEREFIATLEG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I A G + ++ DG + R + D G A+ K Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIKKNDFKGFGESLAKEFIAKGAK 297 Query: 303 NVF 305 + Sbjct: 298 ELL 300 >gi|254303623|ref|ZP_04970981.1| hydroxymethylbilane synthase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323815|gb|EDK89065.1| hydroxymethylbilane synthase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 301 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 148/305 (48%), Gaps = 7/305 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60 KK IG+R S LALA A + L P I + T GD+ N ++I Sbjct: 2 KKNIIIGSRGSILALAQANLVKEKLE--LNYPNLTFEIKEIVTSGDKDLKSNWENSDISL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 LPQGAKVGTSSLRRAMNLKAVRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRTG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E LN E FPP+P QG + I+ N+ + +E++K I++E V ER F Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKEILKSIHNEAIAKIVEIEREFSKIF 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DG C + + ++ G + F V + +GK + I AA+ I+ Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTA-VYSDEGKQ-IKAVVEDYLVKGKEIAHMAAEEIKNKI 296 Query: 301 NKNVF 305 KN Sbjct: 297 AKNTL 301 >gi|262038272|ref|ZP_06011662.1| hydroxymethylbilane synthase [Leptotrichia goodfellowii F0264] gi|261747739|gb|EEY35188.1| hydroxymethylbilane synthase [Leptotrichia goodfellowii F0264] Length = 316 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 113/316 (35%), Positives = 163/316 (51%), Gaps = 22/316 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVH----------------KIPPHNIVIIPLS 44 M+ IGTR S LALA A + + L+ + K I + + Sbjct: 1 MKSNKIIIGTRGSILALAQAEKVKEMLIAKYDELRKKEDFKGISDFNKNESLTIELKIIV 60 Query: 45 TKGDRITNRTLTEIGG---KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYL 101 T GD+ R +I G K LF +EIEK+++ +ID AVHS KDMP + +GL + + Sbjct: 61 TTGDKDL-RDFDKIKGTTQKELFVKEIEKEMLENKIDFAVHSLKDMPQQTPEGLLNACFP 119 Query: 102 PREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 RED RDV +S + + L +L SVIGT S+RR+ LL R DI + RG I TRL KL Sbjct: 120 LREDNRDVIVSKSGKKLNELREKSVIGTGSIRRETELLNLRKDIIIKPIRGNIHTRLKKL 179 Query: 162 NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221 +N + AI+LA AG+KR I E E F P+PGQG +CI+ N+ + +EL+++I Sbjct: 180 DNGEYDAIILAAAGLKRTGLSDRITEYFEDEVFMPAPGQGILCIQCRENDDRIRELLEII 239 Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281 N ++ ER F DG C + I + +G+TL G V DGK G+ Sbjct: 240 NDKEVGIMCETEREFSRIFDGGCHTPIGCSSTIEGNTLKLKG-VYNKDGKRIF-SEIEGD 297 Query: 282 RCDAINIGRDAAQYIR 297 + + I + A+ I+ Sbjct: 298 KNNPKEIAQKLAKEIK 313 >gi|283955967|ref|ZP_06373457.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 1336] gi|283792627|gb|EFC31406.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 1336] Length = 307 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 100/303 (33%), Positives = 155/303 (51%), Gaps = 6/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LAL + L + H+ +++ TKGD + + L +IGGKGLF Sbjct: 2 KLIIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L Sbjct: 59 TKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183 + IGT+SLRRK +L R D+ +I RG + +R+ KL NN+ AI+LA AGIKRL +K Sbjct: 119 AKIGTTSLRRKMQILLLRPDLEIISLRGNVNSRIEKLKNNEFDAIILAMAGIKRLNLDKQ 178 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + ++ P+ QGA+ IE+ +N+ K EL+K +N E+ + ER F+A L+G Sbjct: 179 VNFVYGFSKDELIPAASQGALGIES-INDEKILELLKCLNDENALIETSIEREFIATLEG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I A G + ++ DG+ + R + D G A+ K Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGREILKDKRMIKKDDFKGFGESLAKEFIAKGAK 297 Query: 303 NVF 305 + Sbjct: 298 ELL 300 >gi|164423255|ref|XP_001728039.1| porphobilinogen deaminase [Neurospora crassa OR74A] gi|55976426|sp|Q6MW51|HEM3_NEUCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|38566782|emb|CAE76093.1| related to hydroxymethylbilane synthase [Neurospora crassa] gi|157070012|gb|EDO64948.1| porphobilinogen deaminase [Neurospora crassa OR74A] Length = 337 Score = 325 bits (833), Expect = 7e-87, Method: Composition-based stats. Identities = 102/321 (31%), Positives = 155/321 (48%), Gaps = 18/321 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K+ IGTR S LAL ++L H P + + L+T GD+ +L +G K Sbjct: 4 QKETVHIGTRRSALALRQVDLVIAALQPHH--PNVHFQVHALATLGDKNQTASLPSLG-K 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT------- 114 GL+T E+E KL + E+D VH KDMPT L +G +I RED RDV + Sbjct: 61 GLWTNELEAKLFNKEVDFIVHCLKDMPTTLPEGGKIGVVTEREDPRDVVVMKKKWAEQGK 120 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 +SL DL +++GTSS+RR A L R + D RG IETR+ K + I+LA A Sbjct: 121 YKSLADLPEGAIVGTSSVRRAAQLRRRYPGLVFKDVRGNIETRMRKCDEEDYDCIILAAA 180 Query: 175 GIKRLKKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 G+ R+ ++ I + L+ + GQGA+ +E + K E++K + HE T + Sbjct: 181 GLLRMGYDERIAQWLDSTTEGGGMLHAVGQGALAMEIREGDEKTLEIIKPLCHEKTMVAT 240 Query: 231 NCERAFLAELDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHE---VSRNGNRCDAI 286 ERA + L+G C I G L V++ DGK + V +A Sbjct: 241 FAERAVMRTLEGGCSVPIGVETKWVGEDQLQLKVTVVSLDGKESVDGQSVEVIKTIEEAE 300 Query: 287 NIGRDAAQYIRFISNKNVFNF 307 +G+ A+ + + + +F Sbjct: 301 AMGQKLAEDLAKRGAQKILDF 321 >gi|253582657|ref|ZP_04859878.1| uroporphyrinogen III synthase/methyltransferase [Fusobacterium varium ATCC 27725] gi|251835527|gb|EES64067.1| uroporphyrinogen III synthase/methyltransferase [Fusobacterium varium ATCC 27725] Length = 306 Score = 325 bits (833), Expect = 7e-87, Method: Composition-based stats. Identities = 109/304 (35%), Positives = 153/304 (50%), Gaps = 16/304 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT-------NRTL 55 K+ IGTR S LA+A + + L + P I + T GD +++L Sbjct: 9 KRKIVIGTRGSILAMAQSEMIKKMLE--NNFPELEFEIKKIVTSGDTDLVSNWNNSDKSL 66 Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115 K FT+EIE +L++G ID AVHS KDMP +GL A RED RDV IS + Sbjct: 67 -----KSFFTKEIEVELLNGTIDLAVHSMKDMPVVSPEGLICGAVPDREDSRDVLISKSG 121 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 ++L +L +VIGTSSLRR L RSD+ + RG I TRLNKL AILLA AG Sbjct: 122 KTLMELPKGAVIGTSSLRRTMNLKNLRSDLKIKQLRGNIHTRLNKLKTENYDAILLAAAG 181 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 +KR+ E I E L+ E F P+P QG + I+ N+ + +E++K I+++D V ER Sbjct: 182 LKRVGLENEITEYLDPEKFLPAPAQGVLHIQCRENDEEIKEILKSIHNKDMEKIVVIERE 241 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 F DG C + + G + G+ G+ + S + I I + A Sbjct: 242 FSKIFDGGCHTPMGCHCILNGDKITLTGVYFK--GETGYSASITEDAALGIKIAQKLADI 299 Query: 296 IRFI 299 I+ Sbjct: 300 IKEK 303 >gi|149240385|ref|XP_001526068.1| porphobilinogen deaminase [Lodderomyces elongisporus NRRL YB-4239] gi|146450191|gb|EDK44447.1| porphobilinogen deaminase [Lodderomyces elongisporus NRRL YB-4239] Length = 347 Score = 324 bits (832), Expect = 8e-87, Method: Composition-based stats. Identities = 94/317 (29%), Positives = 154/317 (48%), Gaps = 20/317 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IG R S LA+ + + ++ ++ P I+ LST GD++ + L GGK L+T Sbjct: 20 LQIGGRKSKLAVVQSQLVQQAIQKIY--PDLPSSILALSTLGDKVQTQPLYTFGGKSLWT 77 Query: 66 EEIEKKLISG------EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQ 116 +E+E L+ G +D VHS KDMPT L + ++ RED RD + + Sbjct: 78 KELEILLMDGIDDEFPRLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAIVMKQGSPYK 137 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYA 174 L+DL S++GTSS+RR + L++ + RG I+TRLNKL++ N ++LA A Sbjct: 138 YLRDLPAGSIVGTSSIRRSSQLIKNYPHLKFESVRGNIQTRLNKLDDPSNPYCCLILASA 197 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G+ RL I L ++ + GQGA+ IE ++ + +E++K I ER Sbjct: 198 GLIRLGLGGRITSCL--DEVYYAVGQGALGIEIRKDDHQVKEILKKIEDPVATICCLAER 255 Query: 235 AFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNG---NRCDAINIG 289 + + L+G C + + ST L GI+++ DG E +R D +G Sbjct: 256 SLMRYLEGGCSVPLGVHSEYNESTKKLTLKGIIVSPDGSKSIEDEVTKTIESREDCEAVG 315 Query: 290 RDAAQYIRFISNKNVFN 306 D ++ K + + Sbjct: 316 IDLGDRLKAKGAKEILD 332 >gi|15807343|ref|NP_296073.1| porphobilinogen deaminase [Deinococcus radiodurans R1] gi|11386849|sp|Q9RRY0|HEM3_DEIRA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|6460165|gb|AAF11898.1|AE002066_2 porphobilinogen deaminase [Deinococcus radiodurans R1] Length = 309 Score = 324 bits (832), Expect = 8e-87, Method: Composition-based stats. Identities = 107/306 (34%), Positives = 158/306 (51%), Gaps = 5/306 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR--TLTEIGGK 61 + +GTR S LALA + L + + P + I +STKGDR L + G K Sbjct: 2 RTVTVGTRGSTLALAQTRWVVARLKE--EWPETDFRIQTISTKGDRNRESLEQLAQKGDK 59 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKD 120 G + +EIE+ L++ +ID AVHS KD+PT+ +GL+IS+ R D RD I + L + Sbjct: 60 GFWVKEIEEALLAKKIDIAVHSLKDLPTEQPEGLEISSIPKRVDGRDALIGREGMKKLAE 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSS+RRKA L +R D+ V D RG I+TRL L + + AI+LA AG+ R + Sbjct: 120 LPEGARIGTSSVRRKAFLRAYRPDLIVKDLRGNIDTRLAALGSGEYDAIILAAAGLIRTE 179 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I E ++ + P+PGQGA+ +ET + E+ I+ T D + ER FLA L Sbjct: 180 QRHRIDEFVDPDILLPAPGQGALALETRTEDDLTIEVAYAIHDHATDDRITAEREFLAGL 239 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C + + A K L G V A DG + G+ + +IG + A + Sbjct: 240 GAGCMAPVGAHAVIKNGLLTLEGWVGALDGTQVIRATSQGDVAECADIGAELAADMLERG 299 Query: 301 NKNVFN 306 + Sbjct: 300 AAELIE 305 >gi|46130844|ref|XP_389153.1| hypothetical protein FG08977.1 [Gibberella zeae PH-1] Length = 335 Score = 324 bits (832), Expect = 8e-87, Method: Composition-based stats. Identities = 101/317 (31%), Positives = 152/317 (47%), Gaps = 15/317 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +GTR SPLALA +L + P H+ I ++T GDR N L GGKG Sbjct: 8 KGVVNVGTRKSPLALAQTQIVVDALKQ--RFPDHDFPIHSMTTTGDRDQNTALYNFGGKG 65 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-------HTA 115 L+T ++E++L++ E+D VHS KDMPT L +G + RED RD + H Sbjct: 66 LWTSQLEERLVNRELDIVVHSLKDMPTVLPEGCVLGCVTSREDPRDTLVIKKELQDKHGW 125 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNKAHAILLAYA 174 ++L DL S+IGTSS+RR A L+R + D RG I+TRL KL + I+LA A Sbjct: 126 KTLADLPAGSIIGTSSVRRIAQLVRRYPTLKFKDHRGNIQTRLRKLEEDPDLTGIILAAA 185 Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 G++R+ I + L E+ + GQGA+ +E ++ K +K I +E T + Sbjct: 186 GLQRMDLGHHITQFLESENGGILYAVGQGALGVECRGDDEKVLGFLKTIENEQTALACEA 245 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIG 289 ERA + L+G C I L V++ G + +A G Sbjct: 246 ERALMRALEGGCSVPIGVETKWIDDKLRMKATVVSLRGDEGVDCEIAEAIKTHDEADKFG 305 Query: 290 RDAAQYIRFISNKNVFN 306 + A+ + + + + Sbjct: 306 KKVAETLVEQGAQKILD 322 >gi|198415361|ref|XP_002126885.1| PREDICTED: similar to hydroxymethylbilane synthase, b [Ciona intestinalis] Length = 359 Score = 324 bits (832), Expect = 8e-87, Method: Composition-based stats. Identities = 101/279 (36%), Positives = 150/279 (53%), Gaps = 6/279 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+GTR S LA+ + L ++K + I+ ++T GD+I +++L++ G K LF Sbjct: 6 ILRVGTRKSELAMVQTNWVVNQLKSLNK--SLEVEIVQMATIGDKILDKSLSKTGEKSLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDL 121 T+E+E LI+ ++D V+S KDMP+ L L ISA RED RD I H + L+DL Sbjct: 64 TKELEDALIANQVDLVVNSLKDMPSTLPPNLTISAVSRREDPRDAVIMHPDNVGKRLEDL 123 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLK 180 S++GTSSLRR A L + D+ RG + TRL KL++ + AI+LA AG+KR+ Sbjct: 124 PPGSIVGTSSLRRVAQLKKLFPDLKFKSIRGNLNTRLRKLDDASNFSAIILAVAGVKRMG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I L ++ + GQGA+ IET ++ K+ +LV ++ +DT ERAFL L Sbjct: 184 WNARISYTLTTDECLYAIGQGALGIETRADDMKSIKLVSQLHDKDTVIRTVAERAFLKTL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 G C A ++ LY G V DG + Sbjct: 244 GGGCSVPQAVHSWIIEDELYMRGAVFNLDGSKSLYETMQ 282 >gi|254458597|ref|ZP_05072022.1| porphobilinogen deaminase [Campylobacterales bacterium GD 1] gi|207084905|gb|EDZ62192.1| porphobilinogen deaminase [Campylobacterales bacterium GD 1] Length = 319 Score = 324 bits (832), Expect = 9e-87, Method: Composition-based stats. Identities = 99/307 (32%), Positives = 167/307 (54%), Gaps = 6/307 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I TR S LAL A+ ++ + + P + + + + GD++ ++ L IGG Sbjct: 1 MNK--LVIATRVSDLALWQAYHIKARVEASY--PEITVELNKIVSNGDKVLDKPLALIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG FT+E+E ++++G D AVHS KD+PT + +GL++ A R+D DVF+SH +L+D Sbjct: 57 KGHFTKELEDEMLAGNADIAVHSLKDVPTYIPEGLELVAVTQRQDQSDVFLSHKHATLED 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT+SLRR+ LL+ R D+ V D RG + TRL KL+ + AI+LA+ G+ RL Sbjct: 117 LPQGAVVGTTSLRRRMQLLQQRPDLKVKDLRGNVNTRLRKLSEGQYDAIILAWIGLHRLD 176 Query: 181 KEK--VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 K + L+++ P GQ A+ IE N K +E+ + + +T+ ER F++ Sbjct: 177 LLKDVPFTQKLSLDMMIPPMGQAALGIEIVCGNAKVREIAESLKDLNTFICTQIERDFIS 236 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 ++ C + +A A + + F ++ DG + N D+ N+G + A+ + Sbjct: 237 KIGAGCSAPVACNAVIDDNIITFRVMLGFPDGTNIMQEKVVINVEDSDNLGSELAKKMID 296 Query: 299 ISNKNVF 305 + Sbjct: 297 NGALELL 303 >gi|17547076|ref|NP_520478.1| porphobilinogen deaminase [Ralstonia solanacearum GMI1000] gi|24211753|sp|Q8XWW3|HEM3_RALSO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|17429377|emb|CAD16064.1| probable porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase) (hmbs) (pre-uroporphyrinogen synthase) protein [Ralstonia solanacearum GMI1000] Length = 334 Score = 324 bits (832), Expect = 9e-87, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 163/305 (53%), Gaps = 6/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF Sbjct: 21 KLVIASRESRLAMWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLF 78 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G +SA L RED RD F+S+ L L Sbjct: 79 VKELEVALAEGRADLAVHSLKDVPMELPPGFVLSAILEREDPRDAFVSNDYADLAALPAG 138 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A L + + RG ++TRL+KL+ AI+LA AG+KRL + Sbjct: 139 AVVGTSSLRREASLRARFPHLVIQPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLSER 198 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ ++ E P+ GQGA+ IE+ V+ Q + ++H T +V ERA +L GSC Sbjct: 199 IRAVIAPETSLPAAGQGALGIESRVDRHDVQAWLAPLHHAPTALAVTAERAVSRQLGGSC 258 Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDGKIFH---EVSRNGNRCDAINIGRDAAQYIRFIS 300 + +A FA L V + DG+ + +A +G AQ + Sbjct: 259 QVPLAAFAQWTDAGALRLRAFVASPDGRRKLAAEAEATPATPAEAEALGARVAQQMLDGG 318 Query: 301 NKNVF 305 ++ Sbjct: 319 AHDIL 323 >gi|221211567|ref|ZP_03584546.1| porphobilinogen deaminase [Burkholderia multivorans CGD1] gi|221168928|gb|EEE01396.1| porphobilinogen deaminase [Burkholderia multivorans CGD1] Length = 333 Score = 324 bits (832), Expect = 9e-87, Method: Composition-based stats. Identities = 108/304 (35%), Positives = 165/304 (54%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 76 VKELESALADGRADLAVHSLKDVPMMLPDGFALAAIMRREDPRDAFVSNDYASLDALPAG 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E Sbjct: 136 AVVGTSSLRREAMLRARYPQLQVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEAR 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++ED PP+ GQGA+ IE + ++ ++ T +V ER L GSC Sbjct: 196 IRALLDVEDSPPAAGQGALGIEIAAHRTDVAAWLEPLHDAQTALAVEAERMVSRALGGSC 255 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301 + +A A + LY G V DG + DA+ +GR + + Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTIDGTRVLTAEECASVVTVADALALGRAVSDELEAQGA 315 Query: 302 KNVF 305 + Sbjct: 316 LEIV 319 >gi|237744690|ref|ZP_04575171.1| porphobilinogen deaminase [Fusobacterium sp. 7_1] gi|229431919|gb|EEO42131.1| porphobilinogen deaminase [Fusobacterium sp. 7_1] Length = 302 Score = 324 bits (831), Expect = 9e-87, Method: Composition-based stats. Identities = 110/303 (36%), Positives = 150/303 (49%), Gaps = 7/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60 KK IG+R S LALA A + L + P I + T GD+ N +++ Sbjct: 2 KKNIIIGSRGSILALAQANLIKDKLQINY--PNLTFTIKEIVTSGDKDLKSNWENSDVSL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 LPQGAKIGTSSLRRVMNLKAIRPDFEIKHLRGNIHTRLKKLEIEDYDAIVLAAAGLKRTG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E L+ E FPP+P QG + I+ N+ + +E++K I++E+ V ER F Sbjct: 179 MTDKITEYLSGEVFPPAPAQGVLYIQCRENDEEIKEILKSIHNENIAKIVEIEREFSKIF 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DG C + + ++ G + F V + +GK + I AA+ I+ Sbjct: 239 DGGCHTPMGCYSQVNGDKIKFTA-VYSDEGKQ-IRAVVEDDLTKGKEIAYMAAEEIKNKI 296 Query: 301 NKN 303 NK Sbjct: 297 NKG 299 >gi|310826391|ref|YP_003958748.1| uroporphyrinogen III synthase/methyltransferase [Eubacterium limosum KIST612] gi|308738125|gb|ADO35785.1| uroporphyrinogen III synthase/methyltransferase [Eubacterium limosum KIST612] Length = 804 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 99/304 (32%), Positives = 156/304 (51%), Gaps = 6/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +G+R S LA+ L + P + + + TKGD+I ++ L +IG KG+F Sbjct: 2 KIIVGSRGSKLAVVQTNWLLEELRKAN--PEVDFELKIIKTKGDKIQHKALDKIGDKGIF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDLAL 123 T+E+E L+SGEID AVHS KDMP+ L GL +S RED RDV ++ H ++++L Sbjct: 60 TKELEDALLSGEIDMAVHSMKDMPSALPDGLTLSVPPMREDPRDVLLTPHKISAIQELPE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK--- 180 ++VIGT S RR L R D V+ RG I+TR+ K+ I+LA AG+KR+ Sbjct: 120 NAVIGTGSKRRIYQLKNIRKDFEVVGIRGNIDTRIRKMKEQGLDGIILAAAGLKRIGVYE 179 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 L+ F +P QG + +E +N + L++ +++ T + ER FL L Sbjct: 180 SGDYTCLPLDPCQFVSAPAQGILAVEIREDNETVKALMESVSNPVTKAQMTAERQFLISL 239 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +GSC I + +G L YG+ DG I ++ G + +G A+ ++ + Sbjct: 240 NGSCHIPIGAYCNVEGEKLTLYGLFGNEDGTILYKGQTEGAMGEEAKMGDRLAKELKEMV 299 Query: 301 NKNV 304 + Sbjct: 300 EAKI 303 >gi|86151766|ref|ZP_01069980.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 260.94] gi|315124067|ref|YP_004066071.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841395|gb|EAQ58643.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 260.94] gi|315017789|gb|ADT65882.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 307 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 100/303 (33%), Positives = 153/303 (50%), Gaps = 6/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LAL + L + H+ +++ TKGD + + L +IGGKGLF Sbjct: 2 KLIIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L Sbjct: 59 TKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183 + IGT+SLRRK LL R D+ +I RG + +R+ KL NN AI+LA AGIKRL +K Sbjct: 119 AKIGTTSLRRKMQLLLLRPDLDIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQ 178 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + ++ P+ QGA+ IE+ +N+ K EL++ +N E+ + ER F+A L+G Sbjct: 179 VNFVYEFSKDELIPAASQGALGIES-INDEKILELLECLNDENALIETSIEREFIATLEG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I A G + ++ DG + R + D G A+ K Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIKKNDFKGFGESLAKEFIAKGAK 297 Query: 303 NVF 305 + Sbjct: 298 ELL 300 >gi|315453028|ref|YP_004073298.1| porphobilinogen deaminase [Helicobacter felis ATCC 49179] gi|315132080|emb|CBY82708.1| porphobilinogen deaminase [Helicobacter felis ATCC 49179] Length = 305 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 100/301 (33%), Positives = 154/301 (51%), Gaps = 5/301 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IG+R S LAL A + L + I + TKGD+I + L +IGGKGLF Sbjct: 4 KLVIGSRGSALALWQARHVQELLKPL----GLESEIKIVKTKGDKILDVPLAKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E L+ G+ID AVHS KD+P L +GL ++ R + +D F+S+ +L+ L + Sbjct: 60 TKELEVLLLGGKIDLAVHSLKDVPVDLQEGLVLACVSARANPQDCFLSYKYPNLQALPPN 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGT+SLRR L R+D + RG ++ RL +L AI+LA AG++RL E Sbjct: 120 ARIGTTSLRRAMQLKALRTDTDPLSLRGNVQRRLERLQRGDFEAIILACAGVERLGLELP 179 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + L++E+ PS GQGA+ IE N+P + + +N ++ ER F+ L G C Sbjct: 180 YRVPLSLEEMIPSMGQGALGIEMRANHP-LLDQITSLNDPNSALCCGLERDFVRALGGGC 238 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + + A +G + IV DGK F + + R A + + A + + Sbjct: 239 QVPLGVHARLQGEHIEMRAIVGLVDGKTFIKERASAPRDRAQELAHNLAHTFKQKGALEI 298 Query: 305 F 305 Sbjct: 299 L 299 >gi|296446253|ref|ZP_06888200.1| porphobilinogen deaminase [Methylosinus trichosporium OB3b] gi|296256290|gb|EFH03370.1| porphobilinogen deaminase [Methylosinus trichosporium OB3b] Length = 308 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 128/297 (43%), Positives = 168/297 (56%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M IGTR SPLALA E R L P + I + T GD I +R L E GG Sbjct: 1 MTTAILTIGTRGSPLALAQTHEVRRLLAAALGAPEEALPIEIIRTTGDMIQDRPLAESGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT E++ L G ID AVHS+KD+PT L + I+ +LPRED+RD +I SL D Sbjct: 61 KGLFTRELDIALAEGRIDLAVHSSKDLPTHLPPEIAIAGFLPREDVRDAWIGRGGASLAD 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT+SLRR A + R R D+SV RG +ETRL+K+ + + LLA AG+KRL Sbjct: 121 LPQGAVVGTASLRRGAQVKRLRPDVSVTLLRGNVETRLHKVESGEVDGTLLALAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 IL +EDF P+ GQGAI I + + ++ + I T ++ ERAFL L Sbjct: 181 LADKATAILPLEDFLPAAGQGAIAITKRAGDARTRDALAPILDAATGAALAAERAFLTVL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 DGSC++ IA A G + F+G+ L +DG +E R G DA +G DAA I Sbjct: 241 DGSCRTPIAAHARVDGDAMEFHGLALRADGSEIYEARRRGAAIDAARLGDDAANEIL 297 >gi|313205044|ref|YP_004043701.1| porphobilinogen deaminase [Paludibacter propionicigenes WB4] gi|312444360|gb|ADQ80716.1| porphobilinogen deaminase [Paludibacter propionicigenes WB4] Length = 306 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 96/303 (31%), Positives = 154/303 (50%), Gaps = 3/303 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M KK F + TR S LA +T L K P I+ +ST GD +T++ LT GG Sbjct: 1 MSKK-FVVATRPSLLAYTQTQQTVDLLRV--KNPDCEFEIVKISTHGDTVTDKPLTAFGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F +E+E L G+ A+HS KD+P+ +GL ++A+ R+D RD+ ++ S+ D Sbjct: 58 TGVFVKELENALYEGKAHFAIHSLKDVPSIQPEGLVLAAFPTRQDPRDLLLTRGGVSVAD 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L VIGT S RR + + + I+ D RG I+TRL KL + + AI+LA AG+KRL Sbjct: 118 LPSPCVIGTGSPRRMVQVAKLKEQITFADLRGNIDTRLKKLEDGQYDAIVLAAAGLKRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 KE + + P+ GQGAI IE ++ + ++K IN T ++ ER+++ + Sbjct: 178 KEIAESAYMPTDVCLPAIGQGAIAIECRADDAETIAMLKSINDAATETAIVAERSYMKTI 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G CK + +A + + + ++ + DA +G+ + I + Sbjct: 238 GGGCKFPLGAYATVESDEVNLHVMLGNHHTGQIIRMHETSTVADAEKLGQKLGEAIIAEA 297 Query: 301 NKN 303 K Sbjct: 298 EKQ 300 >gi|307636930|gb|ADN79380.1| porphobilinogen deaminase [Helicobacter pylori 908] gi|325997118|gb|ADZ49326.1| Porphobilinogen deaminase [Helicobacter pylori 2017] Length = 306 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 96/303 (31%), Positives = 153/303 (50%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IG+R S LAL A + L I + TKGD+I + L++IGGKGLF Sbjct: 3 KLVIGSRGSELALWQANHIKERLKKEC---SMESEIRIVKTKGDKILDTPLSKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L Sbjct: 60 TKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183 + +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL + Sbjct: 120 AKVGTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ ++++ PS GQGA+ +E N+ ++ +N E++ + ER F+ L+G Sbjct: 180 KYRKAFSVKEMIPSMGQGALGVEMLKNHKHFIT-LQKLNDEESAFCCHLEREFIKGLNGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I A G + ++ +GK + G++ A ++ R+ + K Sbjct: 239 CQIPIGVHANLMGDEVKIQAVLGLPNGKEVITKEKQGDKNKAFDLVRELLEEFLQSGAKE 298 Query: 304 VFN 306 + Sbjct: 299 ILE 301 >gi|61653263|gb|AAX48216.1| porphobilinogen deaminase [uncultured proteobacterium DelRiverFos06H03] Length = 314 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 103/311 (33%), Positives = 150/311 (48%), Gaps = 15/311 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR S LAL A + L H + ++ ++T GD+I ++ L++IGG Sbjct: 1 MTSQ-LIIATRESRLALWQANHVKELLE----CQGHQVELLGMTTLGDQILDQPLSQIGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L G AVHS KD+P L +G +++ L RED RD ++S +SL Sbjct: 56 KGLFIKELEVALADGSAHLAVHSLKDVPMDLPEGFELACILEREDPRDAWVSPRFESLDS 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR LL R D+ + RG ++TRL KL+ + I+LA AG+KRL Sbjct: 116 LPPGAVVGTSSLRRTVLLKALRPDLKIEPLRGNLDTRLRKLDEGQYAGIVLASAGLKRLG 175 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ + P+ GQGAI IE P L+ +NH T V ER + Sbjct: 176 LKDRIRYSFPLNTMTPAAGQGAIGIEICDKRPDLAHLLSNLNHLPTAVQVYAERGVSRTM 235 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK----------IFHEVSRNGNRCDAINIGR 290 GSC +A A + L + I K +S + A +G+ Sbjct: 236 GGSCSMPLAAHATLETGLLSIHAIWGDPQLKATSLIHAHQQCTLNMSASDVLSQATELGK 295 Query: 291 DAAQYIRFISN 301 AQ + Sbjct: 296 QVAQKLIAKGA 306 >gi|330813348|ref|YP_004357587.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. IMCC9063] gi|327486443|gb|AEA80848.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. IMCC9063] Length = 321 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 177/306 (57%), Gaps = 2/306 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHK-IPPHNIVIIPLSTKGDRITNRTLTEIGG 60 K+ IG+R S L+LA + + L+ + + P I + + T GD+ L +GG Sbjct: 3 AKQKLIIGSRGSRLSLAQSEHFKDELLLANPDLRPDQIELKVIKTSGDKFKTENLASMGG 62 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE++L+ IDCAVHS KD+PT + L+++A+L R+D RD FIS A+S + Sbjct: 63 KGLFVKEIEQELLENNIDCAVHSLKDVPTFGVPSLKLAAFLKRKDERDAFISPVAKSFET 122 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S +GTSS+RR A L + RSD++++ RG I+TR+ K+ +I+LAYAG+KRL Sbjct: 123 LKPGSTVGTSSVRRIAQLKKLRSDLNIVSMRGNIDTRIEKVKEGIYDSIVLAYAGLKRLG 182 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + EIL+ E P+ GQG + I+ N+ + +L+K +N ++T V+ ER+FL + Sbjct: 183 FHTHVSEILDKEKMLPAAGQGVVTIQCRSNDGELIKLLKSVNDKETEIIVSAERSFLHRV 242 Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G+C + +A A ++ +L+ DGK R G A++IG D A+ I Sbjct: 243 NGACDTPVAVNAVLNDDGEVFIQAEILSLDGKKVFNAHRTGISEKAVSIGLDVAEEILDK 302 Query: 300 SNKNVF 305 + + Sbjct: 303 AGHDFV 308 >gi|167767183|ref|ZP_02439236.1| hypothetical protein CLOSS21_01702 [Clostridium sp. SS2/1] gi|167711158|gb|EDS21737.1| hypothetical protein CLOSS21_01702 [Clostridium sp. SS2/1] gi|291559492|emb|CBL38292.1| porphobilinogen deaminase [butyrate-producing bacterium SSC/2] Length = 780 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 109/295 (36%), Positives = 154/295 (52%), Gaps = 4/295 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 + IG+R S LAL + L + P H I + TKGD+I N+ L +IGGKGLF Sbjct: 2 KYIIGSRGSRLALIQTKYVQEKLAKAY--PEHTFEIQIIKTKGDKIQNKPLDKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE+K+ISGEI VHS KDMP+ KGL + RED RDV I TA+ L +L Sbjct: 60 VKEIEEKIISGEIHMGVHSMKDMPSTPAKGLVFTKVWKREDPRDVLILRTAKHLSELREG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +VI T S RR LL+ R D+ +I+ RG ++TRL K+ + I+LA AG+KRL E V Sbjct: 120 AVIATGSKRRAFQLLKLRPDLQIINIRGNVDTRLRKMEEQQLDGIVLAAAGLKRLGMEDV 179 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + L ED +P QGA+ +E + + Q+++ V E+T + V ER FL ++ GSC Sbjct: 180 ITQYLAPEDMISAPAQGALALEVREDQKELQKMLDVFCDEETMNEVCAERNFLEQMGGSC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + Y + DG G + + A + I+ Sbjct: 240 HTPAGARCQKTDQGYELYAMFGNEDGSKQAYTKVYGTC--PEILAQTAVKNIKKQ 292 >gi|91789512|ref|YP_550464.1| porphobilinogen deaminase [Polaromonas sp. JS666] gi|91698737|gb|ABE45566.1| porphobilinogen deaminase [Polaromonas sp. JS666] Length = 334 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 103/314 (32%), Positives = 158/314 (50%), Gaps = 19/314 (6%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + I TR S LAL A ++ L + ++ ++T+GD+I +R+L+++GGKGL Sbjct: 14 RKIIIATRESRLALWQAEHVKALLESRLGW---QVELLGMTTQGDQILDRSLSKVGGKGL 70 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L G D AVHS KD+P L G ++ L RED D F+S+ SL DL Sbjct: 71 FVKELEVALSEGRADLAVHSLKDVPMDLPDGFALACVLEREDPHDAFVSNQFASLADLPQ 130 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR LL R D+++ RG ++TRL KL+ HAI+LA AG+KRL + Sbjct: 131 GAVVGTSSLRRLVLLKALRPDLNIEPLRGNLDTRLRKLDEGHYHAIVLAAAGLKRLGLQA 190 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ I +D P+ GQGA+ IE + + + + H+ TW +V ER + GS Sbjct: 191 RIRGIFAPDDMLPAAGQGALGIEVRADRHDLMQALGTLAHQPTWLAVTAERTVSRAMGGS 250 Query: 244 CKSAIAGFAY------CKGSTLYFY----GIVLASDGK------IFHEVSRNGNRCDAIN 287 C +A + +G L+ A G+ + + + +A Sbjct: 251 CSMPLAAYTEGPAAEGSEGMQLHATWGDPATADAPAGQPLAPLVRVQKTAVVRSFAEAEA 310 Query: 288 IGRDAAQYIRFISN 301 +G A +R Sbjct: 311 LGEAVAAQLRAGGA 324 >gi|50305837|ref|XP_452879.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|55976379|sp|Q6CT60|HEM3_KLULA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|49642012|emb|CAH01730.1| KLLA0C15147p [Kluyveromyces lactis] Length = 327 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 99/321 (30%), Positives = 154/321 (47%), Gaps = 17/321 (5%) Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 ME K RIG R S LA+ + + + + K ++ + T GD++ ++ L G Sbjct: 1 MESKETVRIGGRRSKLAVVQSEQVKVMIES--KFSHIECPLLSVHTLGDQVQSKPLYSFG 58 Query: 60 GKGLFTEEIEKKLI---SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH--- 113 GK ++T+E+E L ID VHS KDMPT L G ++ R D D + Sbjct: 59 GKAVWTKELEDLLYKDDESRIDLIVHSLKDMPTLLPDGFELGGITKRVDPTDALVMPIGS 118 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILL 171 SL +L SV+GTSS+RR A L R ++ RG I+TRL KL++ + I+L Sbjct: 119 PYSSLSELPDGSVVGTSSVRRSAQLKRKFPNLKFESIRGNIQTRLAKLDDPETPYKCIVL 178 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ R + I + N + + GQGA+ IE ++ K ++++K I T Sbjct: 179 ASAGLMRSGLDSRITQRFNADTMCYAVGQGALGIEIRKDDEKMKKILKEICDPSTTICCL 238 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVS----RNGNRCDA 285 ER+ L L+G C I + ST L GIV+ +G + E+ + R D+ Sbjct: 239 AERSLLRTLEGGCSVPIGVVSNYDESTKVLTLKGIVINVEGTEWVEIEHKVTISNEREDS 298 Query: 286 INIGRDAAQYIRFISNKNVFN 306 IN G++ A + K + + Sbjct: 299 INCGKELAAKLTQNGAKEILD 319 >gi|328474912|gb|EGF45712.1| porphobilinogen deaminase [Listeria monocytogenes 220] Length = 288 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 107/285 (37%), Positives = 156/285 (54%), Gaps = 7/285 (2%) Query: 24 RSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHS 83 + L + + P + I + TKGDRI + TL+++GGKGLF E+E+ L ID AVHS Sbjct: 2 INKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKGLFVSEVEQALSDEVIDFAVHS 59 Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS 143 KD+P+ L +GL I A RE D F+ + SL +L SVIGTSSLRR A LL+ R Sbjct: 60 MKDVPSSLKEGLIIGAIPKRESPLDCFVFNRVNSLDELPQGSVIGTSSLRRAAQLLKHRP 119 Query: 144 DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK---EILNIEDFPPSPGQ 200 D + RG I+TRL KL+ AI+LA AG+ R+ + E + E P+ GQ Sbjct: 120 DFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWLENTTLKLEDIPPELCLPAVGQ 179 Query: 201 GAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY 260 GA+ IE ++ + ++++ I+HE+T V ER FL +L+G C+ IAGFA ++ Sbjct: 180 GALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKKLNGGCEIPIAGFATRANEVVH 239 Query: 261 FYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 F G+V +DG I + G + IG A+ + + Sbjct: 240 FKGLVGNADGSIILASEQAG--ANPSEIGNKVAEDLLSEGADTII 282 >gi|45185123|ref|NP_982840.1| ABL107Cp [Ashbya gossypii ATCC 10895] gi|55976464|sp|Q75DY0|HEM3_ASHGO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|44980759|gb|AAS50664.1| ABL107Cp [Ashbya gossypii ATCC 10895] Length = 326 Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats. Identities = 95/321 (29%), Positives = 156/321 (48%), Gaps = 17/321 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ RI R S LA+ + + + + P + ++ T GD++ ++ L GG Sbjct: 1 MGEETLRIAGRRSKLAVIQSESVKEIVQR--EFPNYTCTVLAKQTLGDQVQSKPLYAFGG 58 Query: 61 KGLFTEEIEKKL----ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SH 113 K L+T+E+E L + ID VHS KDMPT+L +G ++ A R D D + Sbjct: 59 KALWTKELEDLLYEEDLDQRIDMIVHSLKDMPTQLPEGFELGAITKRVDPSDCLVMAAGS 118 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILL 171 ++L DL SV+GTSS+RR A L R + RG I+TRL KL++ N+ I+L Sbjct: 119 PYKTLGDLPNGSVVGTSSIRRSAQLRRRYPHLVFASVRGNIQTRLKKLDDPENECKCIIL 178 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ RL E I + + + GQGA+ IET + + Q ++ + ++ Sbjct: 179 ATAGLVRLGLESRITQRFDSTIMLHAVGQGALGIETRTGDERLQAILAKVADRNSTICCL 238 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRN----GNRCDA 285 ER+ + L+G C I ++ T L G+V++ DG E + + ++ DA Sbjct: 239 AERSLMRTLEGGCSVPIGVYSTFDEETSMLTLDGLVVSVDGADAAEATVSYKIKSDKEDA 298 Query: 286 INIGRDAAQYIRFISNKNVFN 306 I G+ A + K + + Sbjct: 299 IACGQLLAAKLLEAGAKKILD 319 >gi|237736083|ref|ZP_04566564.1| porphobilinogen deaminase [Fusobacterium mortiferum ATCC 9817] gi|229421794|gb|EEO36841.1| porphobilinogen deaminase [Fusobacterium mortiferum ATCC 9817] Length = 299 Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats. Identities = 104/304 (34%), Positives = 154/304 (50%), Gaps = 16/304 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT-------NRTL 55 KK IG+R S LALA + + L P + I + T GD+ +++L Sbjct: 2 KKKIVIGSRGSILALAQSEIVKQQLEK--NFPEYEFEIKKIVTSGDKDLVSNWNNSDKSL 59 Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115 K FT+EIE +L++ ID AVHS KDMP+ +GL A RED RDV IS Sbjct: 60 -----KSFFTKEIEVELLNETIDLAVHSMKDMPSISPEGLICGAIPDREDQRDVLISKNG 114 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 ++L +L +++GTSSLRR + R D+ + RG I TRLNKL AILLA AG Sbjct: 115 KTLMELPKGAIVGTSSLRRTMNIKSLRPDLQIKQLRGNIHTRLNKLKTEDYDAILLAAAG 174 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 +KR+ E I E L+ + F P+P QG + I+ N+ + + ++K I+ ED V ER Sbjct: 175 LKRVGLENEITEYLDPKIFLPAPAQGVLHIQCRENDEEIKNILKTIHKEDIKKIVVIERE 234 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 F DG C + + ++ G + FYG+ + + + S + I + + A Sbjct: 235 FSKIFDGGCHTPMGCYSEVNGDKITFYGVYFKDN--LGYTASITEKLSEGIRVAQKLADT 292 Query: 296 IRFI 299 I+ Sbjct: 293 IKEK 296 >gi|68171155|ref|ZP_00544563.1| Porphobilinogen deaminase [Ehrlichia chaffeensis str. Sapulpa] gi|88657743|ref|YP_507506.1| porphobilinogen deaminase [Ehrlichia chaffeensis str. Arkansas] gi|123722778|sp|Q2GGC7|HEM3_EHRCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|67999425|gb|EAM86066.1| Porphobilinogen deaminase [Ehrlichia chaffeensis str. Sapulpa] gi|88599200|gb|ABD44669.1| porphobilinogen deaminase [Ehrlichia chaffeensis str. Arkansas] Length = 298 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 109/292 (37%), Positives = 160/292 (54%), Gaps = 5/292 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+A E ++ L P ++ I+ + T GD L+ IGGK LF Sbjct: 3 IRIGTRGSILAIAQTLEIKNLL--NRYFPEISVQIVKIKTSGDINNQVPLSAIGGKSLFI 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G++D AVHS KD+P +GL I L R DVFIS + +K L L++ Sbjct: 61 KEIEEALLMGKVDLAVHSVKDIPAFYCEGLIIPCVLKRNSPYDVFISSKHKDIKSLPLNA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS+RRK L R D+ V+ RG I+TR+ K N + I+LA AG+ R+ + VI Sbjct: 121 TIGTSSVRRKVQLNYLRPDLQVVPVRGNIDTRILKANVGEFDGIVLAEAGLIRINRCDVI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 KEIL+ + + GQGAI I+ V++ +KV+N ++ V ER+FL ++GSC Sbjct: 181 KEILSPKIMLSAVGQGAIGIQCRVDDHSIINKIKVLNCHQSYVCVMAERSFLKTINGSCD 240 Query: 246 SAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + +A A Y T++ ++ K S N CDA G + + + Sbjct: 241 TPLAALAQYVNNDTIHMSCMLANE--KNMVFASCCFNECDAEKSGINMGKKL 290 >gi|299066045|emb|CBJ37226.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Ralstonia solanacearum CMR15] Length = 334 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 161/305 (52%), Gaps = 6/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF Sbjct: 21 KLVIASRESRLAMWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLF 78 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G +SA L RED RD F+S+ L L Sbjct: 79 VKELEVALAEGRADLAVHSLKDVPMELPPGFALSAILEREDPRDAFVSNDYADLAALPAG 138 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A L + + RG ++TRL+KL+ AI+LA AG+KRL Sbjct: 139 AVVGTSSLRREASLRARFPHLVIQPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLSAR 198 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ ++ E P+ GQGA+ IE+ V+ Q + ++H T +V ERA +L GSC Sbjct: 199 IRAVIAPETSLPAAGQGALGIESRVDRHDVQAWLAPLHHVPTTLAVTAERAVSRQLGGSC 258 Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDGKIFH---EVSRNGNRCDAINIGRDAAQYIRFIS 300 + +A FA L V + DG + +A +G AQ + Sbjct: 259 QVPLAAFAQWTDAGALRLRAFVASPDGSRKLAAEAEATPATPAEAEALGARVAQQMLDGG 318 Query: 301 NKNVF 305 ++ Sbjct: 319 AHDIL 323 >gi|283954165|ref|ZP_06371690.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 414] gi|283794444|gb|EFC33188.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 414] Length = 307 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 99/303 (32%), Positives = 152/303 (50%), Gaps = 6/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LAL + L H+ +++ TKGD + + L +IGGKGLF Sbjct: 2 KLIIATRKSQLALWQSEYIAQILKKTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L Sbjct: 59 TKELEESILRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSKNYKDFLSLPKG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183 + +GT+SLRRK LL R D+ +I RG + +R+ KL N + AI+LA AGIKRL +K Sbjct: 119 ARVGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNGEFDAIILAMAGIKRLSLDKQ 178 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + ++ P+ QGA+ IE+ +N+ K EL+K +N E+ + ER F+A L+G Sbjct: 179 VNFVYEFSKDELIPAASQGALGIES-INDEKILELLKCLNDENALIETSIEREFIATLEG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I A G + ++ DG + R + D G A+ K Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMICKSDFKGFGESLAKEFIAKGAK 297 Query: 303 NVF 305 + Sbjct: 298 ELL 300 >gi|301630638|ref|XP_002944423.1| PREDICTED: porphobilinogen deaminase-like [Xenopus (Silurana) tropicalis] Length = 343 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 102/301 (33%), Positives = 155/301 (51%), Gaps = 8/301 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A ++ L H + ++ L+T+GD+I +R+L++IGGKGLF +E Sbjct: 47 IATRESRLALWQAAHVQALLAAR----GHAVTLLGLTTQGDQILDRSLSKIGGKGLFVKE 102 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L G D AVHS KD+P +L G ++ + RED RD F+S SL L +V+ Sbjct: 103 LELALEQGRADIAVHSLKDVPMELPAGFALACVMEREDARDAFVSPRYASLDALPQGAVV 162 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+ LL R + + RG ++TRL KL+ + AI+LA AG+KRL + I+ Sbjct: 163 GTSSLRRQVLLQALRPGLRIEPLRGNLDTRLRKLDAGQYDAIVLAAAGLKRLGLGERIRS 222 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + + P+ GQGA+ IE + + + + H TW +V ERA + GSC Sbjct: 223 VFAPAEILPAAGQGALGIEVRSDRQDLIDALAPLAHRPTWLTVAAERAVSRAMGGSCSMP 282 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNR---CDAINIGRDAAQYIRFISNKN 303 +A +G+TL+ +G+ A +G A +R + Sbjct: 283 LAAHGQWQGNTLHLDAAWGDPEGRTALVRAQVQAAVATLAQAEALGDAVAARLRAGGAQG 342 Query: 304 V 304 + Sbjct: 343 L 343 >gi|239814381|ref|YP_002943291.1| porphobilinogen deaminase [Variovorax paradoxus S110] gi|239800958|gb|ACS18025.1| porphobilinogen deaminase [Variovorax paradoxus S110] Length = 308 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 102/301 (33%), Positives = 151/301 (50%), Gaps = 9/301 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A ++ L + H + ++ ++T+GD+I +++L+++GGKGLF Sbjct: 11 IVIATRESRLALWQAEHVQALLQER----GHAVSLLGMTTRGDQILDKSLSKVGGKGLFV 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P L +G ++ L RED RD +S SL +L + Sbjct: 67 KELELALEEGRADIAVHSLKDVPMDLPEGFVLACVLEREDPRDALVSPRHASLDELPQGA 126 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR LL R D+ + RG ++TRL KL+ AI+LA AG+KRL E I Sbjct: 127 VVGTSSLRRVVLLRALRPDLRIEPLRGNLDTRLRKLDQGHYDAIVLAAAGLKRLGLEHRI 186 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + + P+ GQGA+ IE + L+ ++H W + ERA + GSC Sbjct: 187 RVAFDPDTMLPAAGQGALGIEVRADRTDLIALLAALSHSRDWLATAAERAVSRSMGGSCS 246 Query: 246 SAIAGFAYCK-GSTLYFYGIVLASDGK-IFHEVSRNGNRCD---AINIGRDAAQYIRFIS 300 +A A + L +G V D A +G AA +R Sbjct: 247 MPLAAHARWQADGALRVDAAWGDPEGNAALVRVHAQAPAADFAQAGALGERAAALLRDAG 306 Query: 301 N 301 Sbjct: 307 A 307 >gi|33520023|ref|NP_878855.1| porphobilinogen deaminase [Candidatus Blochmannia floridanus] gi|39931423|sp|Q7VRM4|HEM3_BLOFL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|33504369|emb|CAD83262.1| porphobilinogen deaminase [Candidatus Blochmannia floridanus] Length = 311 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 101/300 (33%), Positives = 151/300 (50%), Gaps = 3/300 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR-TLTEIG 59 M+ K RI TR SPLA+ A + L H P +IP+ T GD + + T Sbjct: 1 MQAKILRIATRKSPLAICQACYVCNKLKHYH--PHIQTELIPIITTGDTSLHTVSKTNKI 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 KG F +E+E LI D AVHS KD+ L K L I R D RD F+S ++ Sbjct: 59 KKGAFIKELEYALIEHRADIAVHSMKDVTVLLPKELIIPVLCKRHDPRDAFVSIQYPNIH 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L S+IGTSSLRR+ + RSD+ + D RG I TR+ KL+ + +AI+LA AG+ RL Sbjct: 119 SLPTGSIIGTSSLRRQCQIRAQRSDLILHDLRGNINTRIKKLHQGQYNAIILAVAGLTRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 K K I+ ++ + P+ GQG I IE +N+ L+ + H++T + ERA Sbjct: 179 KLTKYIQTYIDPSELLPAMGQGVIAIECRINDINTISLLSPLYHKETSLCIKSERAVTTY 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+ C+ IA +A + + ++ ++ DG I + A +G + A+ + Sbjct: 239 LESYCRLPIASYAEIQNNQIWLRALIGLPDGSIIIRTEGIASLDKAEELGLNLAKDLLIQ 298 >gi|313682001|ref|YP_004059739.1| porphobilinogen deaminase [Sulfuricurvum kujiense DSM 16994] gi|313154861|gb|ADR33539.1| porphobilinogen deaminase [Sulfuricurvum kujiense DSM 16994] Length = 313 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 100/305 (32%), Positives = 154/305 (50%), Gaps = 6/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL + +S + + + + + T GD+I + L +IGGKGL Sbjct: 2 KKLTIATRGSKLALWQSNHIKSVIES--QFSDVEVELKIIITSGDKILDVPLAKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ ++ GE AVHS KD+PT + +GL +SA RED+RD +S +K L Sbjct: 60 FLKEIEESMLRGEAQMAVHSLKDVPTVMPQGLLLSAITVREDVRDAMLSEKYPDIKSLPQ 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR+ L++ R D+ + D RG ++TR+ KL + AI+LA AGI RL Sbjct: 120 GAVVGTSSLRRRMQLVQQRPDLVIKDLRGNVDTRIRKLKEGEFDAIILAAAGINRLGFSN 179 Query: 184 VIKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +++ I ++ P+ GQGA+ IET VN P E+ K + E++ ER F+ L Sbjct: 180 LVQYFYPIALDEMLPAMGQGALGIET-VNEPWVLEIAKFLEDENSRIETTIERGFVDTLQ 238 Query: 242 GSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I A + + + DG + +G A+ + Sbjct: 239 GGCQVPIGVSARVQPNGEVIVRSTLGMPDGSEVMGDEVVVAKGQTEGVGEAMAKRLIAQG 298 Query: 301 NKNVF 305 + Sbjct: 299 AMELL 303 >gi|255262497|ref|ZP_05341839.1| porphobilinogen deaminase [Thalassiobium sp. R2A62] gi|255104832|gb|EET47506.1| porphobilinogen deaminase [Thalassiobium sp. R2A62] Length = 316 Score = 322 bits (827), Expect = 4e-86, Method: Composition-based stats. Identities = 131/305 (42%), Positives = 176/305 (57%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KP +IGTR SPLALA A ETR L +P I + T GDRI +R L EIGGKG Sbjct: 9 TKPLKIGTRGSPLALAQAHETRERLAAAFDLPHEAFAIQVIQTTGDRIIDRPLKEIGGKG 68 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT EIE+ ++ G ID AVHS KDMPT GL + YLPRED+RD FI+ +L DL Sbjct: 69 LFTREIEQAMLDGSIDIAVHSMKDMPTLQPDGLLLDTYLPREDVRDAFIALDGGTLADLP 128 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 V+GTSSLRR+A L R D+ V++FRG ++TRL KL + A A LA AG+ RLK + Sbjct: 129 DGGVVGTSSLRRQAQLRLRRPDLQVVEFRGNLQTRLRKLGDKVADATFLAMAGLNRLKMD 188 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V + + +E+ P+ QGAI IE N+ +A +++ I+ T ++ ERAFL LDG Sbjct: 189 DVTRTPIEVEEMLPAVAQGAIGIERRANDLRAADMLAAIHDRLTGQRLSAERAFLQALDG 248 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC++ IA A G+++ G VL DG D G+ A + + + Sbjct: 249 SCETPIAALAELDGTSMRLRGEVLRPDGSEAIGDDVTILIEDGAAAGQAMAARLLANAGE 308 Query: 303 NVFNF 307 F++ Sbjct: 309 GFFDW 313 >gi|153952621|ref|YP_001398427.1| porphobilinogen deaminase [Campylobacter jejuni subsp. doylei 269.97] gi|166201501|sp|A7H4J7|HEM3_CAMJD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|152940067|gb|ABS44808.1| porphobilinogen deaminase [Campylobacter jejuni subsp. doylei 269.97] Length = 307 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 100/303 (33%), Positives = 153/303 (50%), Gaps = 6/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LAL + L + H+ +++ TKGD + + L +IGGKGLF Sbjct: 2 KLIIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L Sbjct: 59 TKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSTDAMLSQNYKDFLSLPKG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183 + IGT+SLRRK LL R D+ +I RG + +R+ KL NN+ AI+LA AGIKRL +K Sbjct: 119 AKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNNEFDAIILAMAGIKRLNLDKQ 178 Query: 184 -VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + ++ P+ QGA+ IE+ + + K EL+K +N E+ + ER F+A L+G Sbjct: 179 VNFVYEFSKDELIPAASQGALGIES-IKDEKILELLKCLNDENALIETSIEREFIATLEG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I A G + ++ DG + R + D G A+ K Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIKKNDFKGFGEGLAKEFITKGAK 297 Query: 303 NVF 305 + Sbjct: 298 ELL 300 >gi|325995520|gb|ADZ50925.1| Porphobilinogen deaminase [Helicobacter pylori 2018] Length = 306 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 95/303 (31%), Positives = 152/303 (50%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IG+R S LAL A + L I + TKGD+I + L++IGGKGLF Sbjct: 3 KLVIGSRGSELALWQANHIKERLKKEC---SMESEIRIVKTKGDKILDTPLSKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD +S L L Sbjct: 60 TKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTVLSVKFPDLMSLPKG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183 + +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL + Sbjct: 120 AKVGTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ ++++ PS GQGA+ +E N+ ++ +N E++ + ER F+ L+G Sbjct: 180 KYRKAFSVKEMIPSMGQGALGVEMLKNHKHFIT-LQKLNDEESAFCCHLEREFIKGLNGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I A G + ++ +GK + G++ A ++ R+ + K Sbjct: 239 CQIPIGVHANLMGDEVKIQAVLGLPNGKEVITKEKQGDKNKAFDLVRELLEEFLQSGAKE 298 Query: 304 VFN 306 + Sbjct: 299 ILE 301 >gi|308184042|ref|YP_003928175.1| porphobilinogen deaminase [Helicobacter pylori SJM180] gi|308059962|gb|ADO01858.1| porphobilinogen deaminase [Helicobacter pylori SJM180] Length = 306 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 100/307 (32%), Positives = 156/307 (50%), Gaps = 7/307 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK IG+R S LAL A + L I + TKGD+I + L +IGG Sbjct: 1 MEK--LVIGSRGSELALWQANYIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L Sbjct: 56 KGLFTKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMS 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG++RL Sbjct: 116 LPKGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLQRLN 175 Query: 181 KE-KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ER F+ Sbjct: 176 VQGAKYRKAFSVEEMIPSMGQGALGVEMLKNHKHFAT-LQKLNDEESAFCCHLEREFIKG 234 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I A G + ++ +GK + G++ A ++ ++ + Sbjct: 235 LNGGCQIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEEFLQS 294 Query: 300 SNKNVFN 306 K + Sbjct: 295 GAKEILE 301 >gi|208434184|ref|YP_002265850.1| porphobilinogen deaminase [Helicobacter pylori G27] gi|226706288|sp|B5ZA04|HEM3_HELPG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|208432113|gb|ACI26984.1| porphobilinogen deaminase [Helicobacter pylori G27] Length = 306 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 97/302 (32%), Positives = 153/302 (50%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECF---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ER F+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKNHKHFAT-LQKLNDEESAFCCHLEREFVKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A ++ +D + K + Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVITKEKRGDKTKAFDLVQDLLEEFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|305433096|ref|ZP_07402252.1| hydroxymethylbilane synthase [Campylobacter coli JV20] gi|304443797|gb|EFM36454.1| hydroxymethylbilane synthase [Campylobacter coli JV20] Length = 308 Score = 322 bits (826), Expect = 5e-86, Method: Composition-based stats. Identities = 97/304 (31%), Positives = 148/304 (48%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR S LAL + L H + + TKGD + + L +IGGKGL Sbjct: 2 KELVIATRKSQLALWQSEFIADFLNKTH---GIAVRLEGFKTKGDVLLDSPLAKIGGKGL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L Sbjct: 59 FTKELEESMLRNEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGT+SLRRK LL R D+ +I RG + +R+ KL N AI+LA AGIKRL +K Sbjct: 119 GAKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNGDFDAIILAMAGIKRLDLDK 178 Query: 184 --VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ P+ QGA+ IE+ +++ K + +K +N ++ ER F++ L+ Sbjct: 179 QVNFVYTFSKDELIPAASQGALGIES-IDDEKFLKFLKCLNDDNALIETTIEREFISTLE 237 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I A G + I+ DG + R + D G A+ Sbjct: 238 GGCQVPIGINAELLGDEICVRAILGLPDGSEILKEKRMIKKSDFKGFGESLAKEFIAKGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELL 301 >gi|317008888|gb|ADU79468.1| porphobilinogen deaminase [Helicobacter pylori India7] Length = 306 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 96/303 (31%), Positives = 153/303 (50%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IG+R S LAL A + L I + TKGD+I + L +IGGKGLF Sbjct: 3 KLVIGSRGSELALWQANHIQERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L Sbjct: 60 TKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183 + +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 120 AKVGTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ER F+ L+G Sbjct: 180 KYRKAFSVEEMIPSMGQGALGVEMLKNHKHFIT-LQKLNDEESAFCCHLEREFIKGLNGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I A G + ++ +GK + G++ A ++ ++ + K Sbjct: 239 CQIPIGVHASLMGDRVKIQAVLGLPNGKEVITKEKRGDKTKAFDLIQELLEEFLQSGAKE 298 Query: 304 VFN 306 + Sbjct: 299 ILE 301 >gi|50424323|ref|XP_460748.1| DEHA2F08888p [Debaryomyces hansenii CBS767] gi|55976377|sp|Q6BM23|HEM3_DEBHA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|49656417|emb|CAG89089.1| DEHA2F08888p [Debaryomyces hansenii] Length = 361 Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats. Identities = 97/314 (30%), Positives = 153/314 (48%), Gaps = 17/314 (5%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG R S LA+ + + + V K P + ++ LST GD++ ++ L GGK L+T+E Sbjct: 21 IGGRKSKLAVVQSEIVKECI--VEKFPELSCSVLALSTLGDKVQSKPLYSFGGKALWTKE 78 Query: 68 IEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119 +E L+ +D VHS KD+PT L + ++ L RED RD + + +SL Sbjct: 79 LEILLLEQVEEYPRLDLIVHSLKDIPTNLPEEFELGCILNREDARDALVMKSGSSYKSLA 138 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGIK 177 DL S++GTSS+RR + LL+ + RG ++TRLNKL++ +LLA AG+ Sbjct: 139 DLPDGSLVGTSSVRRSSQLLKNHPKLRFDSVRGNLQTRLNKLDDENSPFECLLLASAGLI 198 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ I L+ + + GQGA+ IE + K +L+K I T ER+ + Sbjct: 199 RIGLGDRITAHLDAPEMYYAVGQGALGIEIRKGDEKMLQLLKTIEDLPTTYCCLAERSLM 258 Query: 238 AELDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDA 292 L+G C I ++ + L I+++ DG F E G N+ DA IG Sbjct: 259 RHLEGGCSVPIGVQSHYNESTNELSLKAIIVSPDGIHFVEDEYKGVVNNKDDADAIGIKV 318 Query: 293 AQYIRFISNKNVFN 306 + + + N Sbjct: 319 GDLLSAKGGREILN 332 >gi|217031453|ref|ZP_03436958.1| hypothetical protein HPB128_21g11 [Helicobacter pylori B128] gi|298736817|ref|YP_003729347.1| hydroxymethylbilane synthase [Helicobacter pylori B8] gi|216946653|gb|EEC25249.1| hypothetical protein HPB128_21g11 [Helicobacter pylori B128] gi|298356011|emb|CBI66883.1| hydroxymethylbilane synthase [Helicobacter pylori B8] Length = 306 Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats. Identities = 94/302 (31%), Positives = 150/302 (49%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + T GD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECF---IESEIQIVKTTGDKILDAPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ G ID AVHS KD+P KGL ++ R D RD F+S L L + Sbjct: 61 KELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADARDTFLSVKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL + Sbjct: 121 KVGTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ER F+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKNHKHFIT-LQKLNDEESAFCCHLEREFIKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + + A G + ++ +GK + G++ A ++ ++ + K + Sbjct: 240 QIPVGVHANLMGDEVKIQAVLGLPNGKEVITKEKQGDKNKAFDLVQELLEEFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|145254797|ref|XP_001398757.1| porphobilinogen deaminase [Aspergillus niger CBS 513.88] gi|134084341|emb|CAK48681.1| unnamed protein product [Aspergillus niger] Length = 334 Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats. Identities = 100/315 (31%), Positives = 156/315 (49%), Gaps = 12/315 (3%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K F IGTR S LAL +++L P + I T GD+ T L + K Sbjct: 13 SRKTFTIGTRKSKLALLQTDLVQAALKQ--TWPDYEFKIHSRETAGDQNTTIALRDFTTK 70 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118 L+T+E+E LI+G++D VHS KD+PT L + + RED RDV + SL Sbjct: 71 NLWTQELEDLLIAGQVDFIVHSLKDVPTLLPSSCTLGPMMKREDTRDVLVMKKGLSYTSL 130 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 +L SV+GTSS+RR A L R + V+D RG I TRL+KL+ + ++LA AG+ Sbjct: 131 AELPEGSVVGTSSIRRTAQLARRYPHLKVMDVRGNIGTRLSKLDAEDGPFTCLILAAAGL 190 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 RL I L+ ++ + GQGA+ IE ++ + ++++ I H++T + ER Sbjct: 191 LRLDLGDRITSYLDSKNGGMLYAVGQGALGIEIRKDDQQVLDMLQNIGHKETTFACLAER 250 Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRD 291 + L L+G C + + + L IV++ DGK EV +G + A G Sbjct: 251 SLLRTLEGGCSAPLGVESEWVNGALTMRSIVVSVDGKESAEVEVDGAVDSPQAAEEFGVT 310 Query: 292 AAQYIRFISNKNVFN 306 A+ + + + Sbjct: 311 VAKALVEKGAGKILD 325 >gi|269119644|ref|YP_003307821.1| porphobilinogen deaminase [Sebaldella termitidis ATCC 33386] gi|268613522|gb|ACZ07890.1| porphobilinogen deaminase [Sebaldella termitidis ATCC 33386] Length = 297 Score = 321 bits (824), Expect = 8e-86, Method: Composition-based stats. Identities = 102/303 (33%), Positives = 154/303 (50%), Gaps = 11/303 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG--- 60 + +GTR S LA+A A + L++ KIP + I + T GDR GG Sbjct: 2 RKIVMGTRGSVLAVAQAETVKKMLIE--KIPGLTVEIKKIVTSGDRDQTT---NWGGDSS 56 Query: 61 -KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 K +F +EIE++L+ G ID AVHS KDMP +GL + + RED RDV +S Sbjct: 57 LKSMFVKEIERELLEGTIDFAVHSMKDMPQISPEGLINACFPIREDNRDVLVSKNNTVFS 116 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 ++ SVIGTSSLRRK+ + ++ + RG I TRL KL++ + I+LA AG+ R Sbjct: 117 EMPSGSVIGTSSLRRKSAVTELYPEMEIKPIRGNIHTRLGKLDSGEYDGIILAAAGLIRT 176 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E I E ++ E PP+P QG +C++ NN + E++K I+ +T ER F Sbjct: 177 GLESRISEYIDPEKMPPAPAQGILCVQCRENNMEILEILKEIDDRETRIICEAEREFSRI 236 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DG C + + FA K ++ G+ + G+ + G+ + A+ IR Sbjct: 237 FDGGCHTPMGCFAVIKEEEIFLKGMFCS--GEKMYFGEAGGSIEKPKEAAQKLAEIIRRQ 294 Query: 300 SNK 302 N+ Sbjct: 295 INE 297 >gi|83313519|ref|YP_423783.1| porphobilinogen deaminase [Magnetospirillum magneticum AMB-1] gi|82948360|dbj|BAE53224.1| Porphobilinogen deaminase [Magnetospirillum magneticum AMB-1] Length = 262 Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats. Identities = 106/257 (41%), Positives = 159/257 (61%) Query: 51 TNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF 110 +R L EIGGKGLFT+E+++ ++SG I AVHS KD+PT+L G+ + LPRED+RD F Sbjct: 2 QDRPLAEIGGKGLFTKELDEAMLSGRIHLAVHSMKDVPTQLPDGIVLPCILPREDVRDAF 61 Query: 111 ISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAIL 170 +S SL +L +V+GTSSLRR A +L R D+ V++FRG ++TRL KL A + Sbjct: 62 LSLKVGSLAELPQGAVVGTSSLRRGAQILHRRPDLKVVNFRGNVQTRLRKLEEGVVDATM 121 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 LA AG++RL + L+ +D P+ QGAI I ++ + + + +N D++ V Sbjct: 122 LAMAGLRRLGLAQHATSALSEDDMLPAVAQGAIGITCRADDQASLDYLAALNCPDSFVRV 181 Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 ERAFL LDGSC++ IA A G L F G++++ DG H +R+G+R DA +G+ Sbjct: 182 AAERAFLTRLDGSCRTPIAALAELDGDRLSFRGLIVSPDGTTVHATARSGSRADAEAMGK 241 Query: 291 DAAQYIRFISNKNVFNF 307 DAA+ + ++ F+ Sbjct: 242 DAAEELIKVAGPGFFDL 258 >gi|195490377|ref|XP_002093114.1| GE21148 [Drosophila yakuba] gi|194179215|gb|EDW92826.1| GE21148 [Drosophila yakuba] Length = 653 Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats. Identities = 101/316 (31%), Positives = 152/316 (48%), Gaps = 21/316 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K Sbjct: 4 QEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKIGEK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + ++ Sbjct: 62 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHTI 121 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 L SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA AG+ Sbjct: 122 ASLPQGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQAGL 181 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+F Sbjct: 182 VRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERSF 241 Query: 237 LAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 L L G C + +A ++ KG L G V + DG I + Sbjct: 242 LKTLGGGCSAPVAVWSTLKGEPLNGNSQEVGLSLTGAVWSLDGAIEIRNHLACALNE--- 298 Query: 288 IGRDAAQYIRFISNKN 303 + R + Sbjct: 299 --QKLEGEQRKRGAQE 312 >gi|15611292|ref|NP_222943.1| porphobilinogen deaminase [Helicobacter pylori J99] gi|11133270|sp|Q9ZMJ7|HEM3_HELPJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|4154748|gb|AAD05809.1| PORPHOBILINOGEN DEAMINASE [Helicobacter pylori J99] Length = 306 Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats. Identities = 97/307 (31%), Positives = 155/307 (50%), Gaps = 7/307 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK IG+R S LAL A + L I + T GD+I + L +IGG Sbjct: 1 MEK--LVIGSRGSELALWQANHIKERLKKEC---SMESEIRIVKTTGDKILDAPLNKIGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L Sbjct: 56 KGLFTKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMS 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL Sbjct: 116 LPKGAKVGTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLN 175 Query: 181 KE-KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ ++++ PS GQGA+ +E N+ ++ +N+E++ + ER F+ Sbjct: 176 VQGAKYRKAFSVKEMIPSMGQGALGVEMLKNHKHFIT-LQKLNNEESAFCCHLEREFIKG 234 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I A G + ++ +GK + G++ A ++ ++ + Sbjct: 235 LNGGCQIPIGVHANLMGDEVKIRAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEEFLQS 294 Query: 300 SNKNVFN 306 K + Sbjct: 295 GAKEILE 301 >gi|124005986|ref|ZP_01690823.1| porphobilinogen deaminase [Microscilla marina ATCC 23134] gi|123988393|gb|EAY28039.1| porphobilinogen deaminase [Microscilla marina ATCC 23134] Length = 308 Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats. Identities = 105/303 (34%), Positives = 159/303 (52%), Gaps = 7/303 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A L ++ + TKGD+I N+ L++IG KG+FT Sbjct: 3 IRIGTRGSKLALWQANYVADLLQKGGA----TTELVMVETKGDKILNKALSKIGSKGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDLALH 124 EE+E+ L E+D AVHSAKD+ + L L++ A+ RE++ DV IS +T L Sbjct: 59 EELEEHLRQKEVDIAVHSAKDVQSTLPDDLELIAFSEREEVHDVLISFNTDARLDTFNSS 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +IGTSS RR A L + I D RG ++TR+ KL A++LAYAG+ R+ K Sbjct: 119 YIIGTSSTRRVAQLKHYYPKIRTADVRGNLQTRMKKLEKGNYDALILAYAGVHRMGFSKY 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVN--NPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E L+ F P+ GQG + IE + N K + + +N + T + ER+FL L+G Sbjct: 179 IVEDLSPNKFIPAVGQGCVAIEAAKDLNNDKVAMIRQCVNDKKTEQCLRAERSFLKTLEG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C + G A K + + G +++ +G+ + G D ++IG+ A+ I + Sbjct: 239 GCSIPVFGLARIKKNQIELKGGIISLNGQDLVKQQAKGVLDDGVSIGKQLAERILQDGGE 298 Query: 303 NVF 305 + Sbjct: 299 EIL 301 >gi|150024157|ref|YP_001294983.1| hydroxymethylbilane synthase [Flavobacterium psychrophilum JIP02/86] gi|149770698|emb|CAL42162.1| Hydroxymethylbilane synthase [Flavobacterium psychrophilum JIP02/86] Length = 308 Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 96/303 (31%), Positives = 159/303 (52%), Gaps = 10/303 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M KK +IGTR S LAL A L D+ H II + ++GD I ++ L E+G Sbjct: 1 MAKKTIKIGTRDSELALWQAHHVEKMLNDL----GHKTKIIAVKSQGDIILDKPLYELGI 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ +++G+ID AVHS KD+PT L +G+ +A L R + +D+ + + +L Sbjct: 57 TGIFTKTLDIAMVNGDIDIAVHSMKDVPTALPQGIVQAAVLERANEKDILVYNN--NLDF 114 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + I T SLRR+A L + V+D RG + TR+ KL +N + + A AG++R+ Sbjct: 115 LNTQATIATGSLRRQAQWLHKYPNHKVVDLRGNVNTRMQKLQDNNWNGAVFAAAGLERIN 174 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + +N++ P+P QGA+ + N+ + + +NH +T + ER FL L Sbjct: 175 IKPENY--INLDWMIPAPAQGAMMVVAMGNDTYCLDALAELNHIETEITTYIERQFLRTL 232 Query: 241 DGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +G C + I +A K T++F G++ + DG E+ + + +G A Q I Sbjct: 233 EGGCTAPIGAYARFNEKDETIHFQGVLFSLDGSQKIEIKKIVEIQEWKQLGYHAGQEIFE 292 Query: 299 ISN 301 Sbjct: 293 NGG 295 >gi|330817976|ref|YP_004361681.1| Porphobilinogen deaminase [Burkholderia gladioli BSR3] gi|327370369|gb|AEA61725.1| Porphobilinogen deaminase [Burkholderia gladioli BSR3] Length = 323 Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 160/305 (52%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LAL A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLALWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G +S + RED RD F+S+ SL DL Sbjct: 71 VKELENALADGRADLAVHSLKDVPMSLPEGFVLSTVMSREDPRDAFVSNDYASLDDLPTG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +++GTSSLRR+A+L D V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AIVGTSSLRREAMLRAHYLDFDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLGDR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ ++++E PP+ GQGA+ IE + + ++ T + ER L GSC Sbjct: 191 IRALIDVETSPPAAGQGALGIEIAASRTDVARWLAPLHDSATALAAEAERMVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 +A A G L G V + G V ++ +A+ +G+ + + Sbjct: 251 SVPLAAHAIWHGERLELTGRVSNTSGTRVLTVRQDAAVTTPDEALALGKQVSDELERQGA 310 Query: 302 KNVFN 306 + Sbjct: 311 FEIIE 315 >gi|193638791|ref|XP_001948145.1| PREDICTED: porphobilinogen deaminase-like isoform 1 [Acyrthosiphon pisum] gi|328705509|ref|XP_003242834.1| PREDICTED: porphobilinogen deaminase-like isoform 2 [Acyrthosiphon pisum] Length = 377 Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 103/363 (28%), Positives = 165/363 (45%), Gaps = 61/363 (16%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K R+G+R S LAL S L ++H P I+ ++T GDR+ ++ L +IG K Sbjct: 6 RKTIRVGSRKSELALIQTKFVISQLKELH--PEIEFEIVSMTTMGDRVLDKPLPKIGEKS 63 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 LFT+++E L+SG +D VHS KD+PT + G I A L R+D RD + L Sbjct: 64 LFTKDLEVALLSGTVDFIVHSLKDLPTVMEIGTTIGAILKRDDPRDALVLRDDCKEYQLD 123 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK---------AHAIL 170 L S IGTSSLRR A L R ++ V D RG + TRL KL++++ I+ Sbjct: 124 SLPSKSFIGTSSLRRTAQLKRKFPNLQVSDVRGNLNTRLKKLDSSQSTGDNTNTNYSGII 183 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 LA AGI+R+ EK + +I++ + + GQGA+ +E + + E+++ ++H +T V Sbjct: 184 LALAGIQRMGWEKRVSQIIDSDVMLYAVGQGALAVECRLGDDYILEMLEPLHHYETVLQV 243 Query: 231 NCERAFLAELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCD---- 284 ER FL L G C + + + + + G V + DG + S + D Sbjct: 244 VAERGFLTRLGGGCSAPVGIRSTVCLTKNAMSLDGAVWSLDGAEELQYSSSAELADKKVI 303 Query: 285 -----------------------------------------AINIGRDAAQYIRFISNKN 303 A+ +G + A+ + + Sbjct: 304 QSHIDQYRGEDGEPPKKCPYKQPRQFVGVTPGKISYLDLDTALKLGTELAENLISKGALD 363 Query: 304 VFN 306 + N Sbjct: 364 IMN 366 >gi|256845448|ref|ZP_05550906.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_36A2] gi|256719007|gb|EEU32562.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_36A2] Length = 302 Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 109/303 (35%), Positives = 149/303 (49%), Gaps = 7/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60 KK IG+R S LALA A + L + P I + T GD+ N ++I Sbjct: 2 KKNIIIGSRGSILALAQANLIKDKLQINY--PNLTFTIKEIVTSGDKDLKSNWENSDISL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 LPQGAKVGTSSLRRAMNLKTVRPDFEIKHLRGNIHTRLKKLETENYDAIVLAAAGLKRTG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E LN E FPP+P QG + I+ N+ + ++++K I+++ V ER F Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKKILKSIHNKAVAKIVEIEREFSKIF 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DG C + + ++ G + F + L GK + + I AA+ I+ Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTAVYLDE-GKQ-IKAVVEDDLAKGKEIAHMAAEEIKNKI 296 Query: 301 NKN 303 NK Sbjct: 297 NKG 299 >gi|15644865|ref|NP_207035.1| porphobilinogen deaminase [Helicobacter pylori 26695] gi|2495174|sp|P56140|HEM3_HELPY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|2313328|gb|AAD07304.1| porphobilinogen deaminase (hemC) [Helicobacter pylori 26695] Length = 306 Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 96/302 (31%), Positives = 151/302 (50%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E N+ ++ +N E + ER F+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKNHKHFAT-LQKLNDEKSAFCCRLEREFIKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A ++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVITKEKQGDKTKAFDLVQELLEEFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|154298906|ref|XP_001549874.1| hypothetical protein BC1G_11700 [Botryotinia fuckeliana B05.10] gi|150857605|gb|EDN32797.1| hypothetical protein BC1G_11700 [Botryotinia fuckeliana B05.10] Length = 379 Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 98/315 (31%), Positives = 147/315 (46%), Gaps = 15/315 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IGTR S LA+ + +++L H P N I L T GD+ L + G K L+ Sbjct: 52 TIHIGTRKSALAMVQTEQVKAALEKAH--PHLNFEITKLETMGDKNQVTALHDFGAKSLW 109 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T E+E L+ ++D VH KDMPT+L I A L RED RD I +SL +L Sbjct: 110 THELEALLLDRKLDIVVHCLKDMPTQLPSKCIIGAILEREDPRDALIMKAGSNYKSLSEL 169 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRL 179 SV+GTSS+RR A + R ++ + RG I TRLNKL ++ K ++LA AG+ R+ Sbjct: 170 PAGSVVGTSSVRRSAQIARKYPELKFENARGNIGTRLNKLDADDGKYSCLILAAAGLLRM 229 Query: 180 KKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + I + L+ + + GQGA+ +E + + ++ + HE T + ER+ Sbjct: 230 GWGERITQYLDSKTEGGGMLHAVGQGALALEVRDGDEEIGTMISALQHEPTQLAGLAERS 289 Query: 236 FLAELDGSCKSAIAG-FAYCKGSTLYFYGIVLASDGKIFHEVSR---NGNRCDAINIGRD 291 + L+G C I + + L IV++ DG E R DA G Sbjct: 290 LMRTLEGGCSVPIGVETTWIEKGKLLMKAIVVSLDGTESVESERLEEILTPKDADEFGWS 349 Query: 292 AAQYIRFISNKNVFN 306 AQ + + Sbjct: 350 LAQDLVSKGAAKILE 364 >gi|171057453|ref|YP_001789802.1| porphobilinogen deaminase [Leptothrix cholodnii SP-6] gi|170774898|gb|ACB33037.1| porphobilinogen deaminase [Leptothrix cholodnii SP-6] Length = 322 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 100/307 (32%), Positives = 155/307 (50%), Gaps = 8/307 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P I TR S LAL A R L H + ++ ++T+GD+I +R L+++GGKGL Sbjct: 12 QPCIIATRESRLALWQAEHVRDLLQRRHGA---VVELLGMTTRGDQILDRALSKVGGKGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L AVHS KD+P +L +G ++A L RED RD ++S+ + L Sbjct: 69 FVKELEVALEEDRAQLAVHSLKDVPMELPEGFVLAAVLEREDPRDAWVSNHYDDVASLPQ 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRR L R D+ + RG ++TRL KL+ I+LA AG+KRL + Sbjct: 129 GARVGTSSLRRIVQLKAVRPDLEIHALRGNLDTRLRKLDEGLYDGIVLAAAGLKRLGLAQ 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ +++ P+ GQGA+ IE + +E + + TW +V+ ERA L GS Sbjct: 189 RIRSVIDPAVMLPAAGQGALGIEVRADASALREALAAMTDAPTWLAVHAERAVSRALGGS 248 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLAS-DGKI-FHEVSRNGNRCD---AINIGRDAAQYIRF 298 C +A FA +G+ L+ + D + S D A +G +R Sbjct: 249 CSMPLAAFAQWQGAQLHLEARLGHPEDASVALIVASAEAAVTDTAGAEALGLAVVARLRA 308 Query: 299 ISNKNVF 305 + + Sbjct: 309 GGGEALL 315 >gi|296823866|ref|XP_002850512.1| porphobilinogen deaminase [Arthroderma otae CBS 113480] gi|238838066|gb|EEQ27728.1| porphobilinogen deaminase [Arthroderma otae CBS 113480] Length = 334 Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats. Identities = 100/319 (31%), Positives = 154/319 (48%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +P RIGTR S LA+ A + L + P H I L T GD+ N +L G K Sbjct: 7 ANRPLRIGTRRSNLAIIQAKAIQDQLQKL--APEHTFEIEALHTIGDKDQNSSLYNFGAK 64 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 L+T E+E+ L SG++D VH KDMPTKL ++A R+D RD I SL Sbjct: 65 NLWTTELEELLTSGKLDVVVHCLKDMPTKLPDSCDLAAIPLRDDPRDALIVKVGLPYTSL 124 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176 + L +V+GTSS+RR A L R ++ I+ RG +ETRL KL++ ++ I+++ G+ Sbjct: 125 QSLPEGAVVGTSSVRRSAQLCRLFPNLRFINIRGNVETRLAKLDDPQSEYTCIIMSACGL 184 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 +R+ I + + +D + GQGAI +E + K L+ + + + ER Sbjct: 185 ERVGLGYRINQRIGSKDGGILHAVGQGAIGLEVRKGDTKILHLLDQLVDHKSSLACLAER 244 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNG---NRCDAI 286 A + L+G C I G TL GIV++ DG E S + + +A Sbjct: 245 ALMRTLEGGCSVPIGVETEWIGDSEVYLTLRIRGIVISLDGSRSVEDSIDATVSTKDEAT 304 Query: 287 NIGRDAAQYIRFISNKNVF 305 +G++ A + + Sbjct: 305 ALGQELAARLLEAGAATIL 323 >gi|210134437|ref|YP_002300876.1| porphobilinogen deaminase [Helicobacter pylori P12] gi|226706287|sp|B6JKG8|HEM3_HELP2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|210132405|gb|ACJ07396.1| porphobilinogen deaminase [Helicobacter pylori P12] Length = 306 Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats. Identities = 96/302 (31%), Positives = 151/302 (50%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGTIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++++ PS GQGA+ +E N+ ++ +N E + ER F+ L+G C Sbjct: 181 YRKAFSVKEMIPSMGQGALGVEMLKNHKHFAT-LQKLNDEKSAFCCRLEREFIKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A ++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVITKEKRGDKTKAFDLVQELLEEFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|146298706|ref|YP_001193297.1| porphobilinogen deaminase [Flavobacterium johnsoniae UW101] gi|146153124|gb|ABQ03978.1| porphobilinogen deaminase [Flavobacterium johnsoniae UW101] Length = 307 Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats. Identities = 96/306 (31%), Positives = 158/306 (51%), Gaps = 11/306 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K RIGTR S LAL A L D+ + I+ + ++GD I ++ L E+G Sbjct: 1 MAEKTIRIGTRDSELALWQAHNVEKKLNDL----GYKTSIVAVKSQGDIILDKPLYELGI 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ +I+G+ID AVHS KD+PT L KG+ A LPR ++ D+ + D Sbjct: 57 TGIFTKTLDIAMINGDIDIAVHSMKDVPTALPKGIVQGAVLPRANVLDILVHKGN---PD 113 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 S I T SLRR+A + +V+D RG + TR+ KL +N + A AG++R+ Sbjct: 114 FTNPSTIATGSLRRQAQWFNKYPNHTVVDLRGNVNTRMQKLQDNNWDGAVFAAAGLERIN 173 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + +N++ P+P QGA+ + N+ + + +N +T + ER FL L Sbjct: 174 LKPENY--INLDWMIPAPAQGAMLVVGMENDNYTLDALSQLNDIETEICTHIERQFLRTL 231 Query: 241 DGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +G C + I TL+F G++L+ DGK E+++ + + +G ++AQ I Sbjct: 232 EGGCTAPIGALVTYNEDEDTLHFQGVLLSIDGKQKLEINKTVDISEWKKLGFNSAQEILN 291 Query: 299 ISNKNV 304 + Sbjct: 292 NGGTEL 297 >gi|190345502|gb|EDK37399.2| hypothetical protein PGUG_01497 [Meyerozyma guilliermondii ATCC 6260] Length = 371 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 95/319 (29%), Positives = 154/319 (48%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K +IG R S LA+A + + L V K P I+ LST GD+I ++ L GGK Sbjct: 8 TTKHIQIGGRKSTLAVAQSNIVKKHL--VAKFPQLKCSILALSTLGDQIQSQPLYSFGGK 65 Query: 62 GLFTEEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-- 114 L+T+E+E L+ ++D VHS KD+PT L + ++ L R D RDV + Sbjct: 66 ALWTKELETLLMQAIGGLPQLDMIVHSLKDVPTNLPEEFELGCILDRSDPRDVLVMRKGS 125 Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILL 171 +SL +L +++GTSS+RR + L++ + RG I TR+ KL+ +LL Sbjct: 126 KYKSLAELPAGTMVGTSSVRRSSQLMKNYPHLRFDSARGNINTRVQKLDAEDSPFECLLL 185 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG++R+ + I L+ D + GQGA+ +E + + ++L++ I T + Sbjct: 186 AAAGLQRVGLDHRITTYLDAPDMYYAVGQGALGVEIRKGDEQIKQLLQAIEDVPTSLCCH 245 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRN---GNRCDAI 286 ER+ + L+G C I +T L F IV++ DG F E + +A Sbjct: 246 AERSLMRYLEGGCSVPIGVHTDYDKTTQVLKFNAIVVSPDGNEFVEDKIEMKVTTKSEAD 305 Query: 287 NIGRDAAQYIRFISNKNVF 305 +G+ + K + Sbjct: 306 ALGQQLGDKLIAKGAKEIL 324 >gi|238028332|ref|YP_002912563.1| Porphobilinogen deaminase [Burkholderia glumae BGR1] gi|237877526|gb|ACR29859.1| Porphobilinogen deaminase [Burkholderia glumae BGR1] Length = 322 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 158/305 (51%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL +L Sbjct: 71 VKELETALADGRADLAVHSLKDVPMSLPEGFALTAVMRREDPRDAFVSNDYASLDELPTG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S++GTSSLRR+A+L DI V RG ++TRL KL+ AI+LA AG+KRL + Sbjct: 131 SIVGTSSLRREAMLRARYLDIDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLDAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ ++ +E PP+ GQGA+ IE + + ++ T + ER L GSC Sbjct: 191 IRSLIEVEASPPAAGQGALGIEIAAARAELARWLAPLHDPATALACEAERMVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + +A A G L G V G A+ +GR A + Sbjct: 251 EVPLAAHAVWDGDVLQLTGRVSNPSGTRVLNARARAAVSTPDAALALGRQVADELARQGA 310 Query: 302 KNVFN 306 + Sbjct: 311 FEIVE 315 >gi|294507567|ref|YP_003571625.1| Porphobilinogen deaminase [Salinibacter ruber M8] gi|294343895|emb|CBH24673.1| Porphobilinogen deaminase [Salinibacter ruber M8] Length = 323 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 100/305 (32%), Positives = 167/305 (54%), Gaps = 7/305 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +GTR S LAL A RS L H + + ++T+GD T+ ++EIG + +F Sbjct: 6 PLVLGTRGSELALRQANVVRSRLEAA----GHRVELETITTRGDEATDTPISEIGDEAVF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS--LKDLA 122 T+E+++ L+ G +D AVHS KD+P+ + GL ++A RED RD F++H + L DL Sbjct: 62 TKELDRALLQGGVDLAVHSLKDIPSTVPSGLALAAIGEREDPRDAFVAHPSFDGHLHDLP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + + T+SLRR A LL WRSD+ V+ RG ++TRL KL+ + ++LA AG+ RL Sbjct: 122 EGATVATASLRRTAQLLTWRSDLEVVPVRGNVDTRLEKLSESDWTGMVLAVAGLVRLGLS 181 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV-INHEDTWDSVNCERAFLAELD 241 I++ ++ P+ GQGA+ I + ++L++ ++H + + N ERAFL ++ Sbjct: 182 LHIRDRIDPSLIVPAVGQGALGIACREDQDALRDLLRETLHHAPSGHAANAERAFLKKVG 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ + +A+ TL + A DG + R D +GR+ A + + Sbjct: 242 GGCQVPLGAWAHIDDGTLVLDACIAALDGSEHYRDERRCAPEDGAAVGRELAADLLAMGG 301 Query: 302 KNVFN 306 ++ + Sbjct: 302 DHILD 306 >gi|226354974|ref|YP_002784714.1| porphobilinogen deaminase [Deinococcus deserti VCD115] gi|259647793|sp|C1CYD9|HEM3_DEIDV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226316964|gb|ACO44960.1| putative Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Deinococcus deserti VCD115] Length = 311 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 108/308 (35%), Positives = 158/308 (51%), Gaps = 7/308 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR--TLTEIGGK 61 + +GTR S LALA + L + + P + I +STKGDR + + G K Sbjct: 2 RTVTVGTRGSTLALAQTRWVVARLKE--EWPDTDFRIQTISTKGDRNRESLEAMAQKGDK 59 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKD 120 G + +EIE L+ ID AVHS KD+PT+ +GL++++ R D RDV I + L D Sbjct: 60 GFWVKEIEDALLQKRIDIAVHSLKDLPTEQPEGLEVASIPKRVDARDVLIGKEGMKRLAD 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSS+RRKA L +R D+ VID RG I+TRL L ++ AI+LA AG+ R + Sbjct: 120 LPQGARVGTSSVRRKAFLRAYRPDLQVIDLRGNIDTRLAALAGDEYDAIILAAAGLIRTE 179 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVN--NPKAQELVKVINHEDTWDSVNCERAFLA 238 I E + + P+PGQGA+ +ET N E+ I+ T D + ER FLA Sbjct: 180 MRHRIDEFVEPDILLPAPGQGALALETRSGPENDLTIEVAYAIHDHGTDDRITAEREFLA 239 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L C + + A KG L G V A DG + G+ + +IG + A + Sbjct: 240 GLGAGCMAPVGAHASIKGGVLTLEGWVGALDGSKVIRATSIGDPAECADIGAELAGDMLG 299 Query: 299 ISNKNVFN 306 + + + Sbjct: 300 QGAQALID 307 >gi|325262509|ref|ZP_08129246.1| hydroxymethylbilane synthase [Clostridium sp. D5] gi|324032341|gb|EGB93619.1| hydroxymethylbilane synthase [Clostridium sp. D5] Length = 293 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 99/294 (33%), Positives = 150/294 (51%), Gaps = 6/294 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LA+ A + + H P + ++ + T GD+I +++L IGGKGLF Sbjct: 5 IRIGSRESRLAVIQAEIVKELIQKNH--PDIQVELVTMKTTGDKILDKSLELIGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++K L+ G ID +VHS KDMP ++ K L I+AY RED RD I ++ + Sbjct: 63 KELDKALLEGSIDISVHSLKDMPMEIPKELPIAAYSKREDPRDALICRPGC--CEIPVDG 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS RR L + + + RG ++TRL KL +LA AG+ RL E VI Sbjct: 121 VIGTSSRRRSLQLKKLYPECTFRQIRGNVQTRLRKLEEEGYDGTILAAAGLSRLNMEHVI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 I + E+ P+ GQG + ++ + + ++ + ER F+A LDG C Sbjct: 181 GRIFSTEEMIPAAGQGILAVQGRKGED--HFFLDCVENKKSRAEALAEREFVAVLDGGCT 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S +A A G+ L G+ + + +R GN DA +G A+ +R Sbjct: 239 SPVAAHAEVNGNELKLTGLYYREEDDTYWTETRIGNTADARQLGAALAEEMRRR 292 >gi|240141705|ref|YP_002966185.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Methylobacterium extorquens AM1] gi|240011682|gb|ACS42908.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Methylobacterium extorquens AM1] Length = 294 Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats. Identities = 112/292 (38%), Positives = 164/292 (56%), Gaps = 3/292 (1%) Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74 +ALA R ++ + P I+ +ST DR+ +R L+EIGGKGLFT+E+E+ L + Sbjct: 1 MALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIGGKGLFTKELEQALFA 58 Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKDLALHSVIGTSSLR 133 EID AVHS KD+ T L GL I+ L R+D RD F+S + L DL + +GTSSLR Sbjct: 59 DEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADLPPGARVGTSSLR 118 Query: 134 RKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIED 193 R A +L R D++++ RG TR+ KL + A LLA AG++RL V + +L++E+ Sbjct: 119 RGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGMADVARSVLSVEE 178 Query: 194 FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY 253 P+ QGA+ IE + + L+ + T +++ ER LAELDGSC++ IA A Sbjct: 179 MLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELDGSCRTPIAALAQ 238 Query: 254 CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 KG + G++ DG V R G DA IGR+A ++ + F Sbjct: 239 VKGDRISLDGLLFLPDGSRHWAVHREGLAADADAIGREAGAELKRAAGDVYF 290 >gi|317064836|ref|ZP_07929321.1| porphobilinogen deaminase [Fusobacterium ulcerans ATCC 49185] gi|313690512|gb|EFS27347.1| porphobilinogen deaminase [Fusobacterium ulcerans ATCC 49185] Length = 299 Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats. Identities = 108/304 (35%), Positives = 154/304 (50%), Gaps = 16/304 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT-------NRTL 55 KK IG+R S LA+A + + L + P I + T GD +++L Sbjct: 2 KKKIVIGSRGSILAMAQSEMIKKMLE--NNFPELEFEIKKIVTSGDTDLVSNWNNSDKSL 59 Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115 K FT+EIE +L++G ID AVHS KDMP +GL A RED RDV +S + Sbjct: 60 -----KSFFTKEIEVELLNGTIDLAVHSMKDMPVVSPEGLICGAVPDREDSRDVLVSKSG 114 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 ++L +L +++GTSSLRR L RSD+ + RG I TRLNKL N AILLA AG Sbjct: 115 KTLMELPAGAIVGTSSLRRTMNLKNLRSDLEIKQLRGNIHTRLNKLKNEDYDAILLAAAG 174 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 +KR+ EK I E L+ E F P+P QG + I+ N+ + ++++K I++ED V ER Sbjct: 175 LKRVGLEKEITEYLDPEKFLPAPAQGVLHIQCRENDDEVKKILKSIHNEDIEKVVVIERE 234 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 F DG C + + G + GI G+ + S + I + A Sbjct: 235 FSKIFDGGCHTPMGCHCILDGDKITLTGIYFK--GENGYSASITEDAALGIKTAQKLADI 292 Query: 296 IRFI 299 I+ Sbjct: 293 IKEK 296 >gi|158421885|ref|YP_001523177.1| porphobilinogen deaminase [Azorhizobium caulinodans ORS 571] gi|158328774|dbj|BAF86259.1| porphobilinogen deaminase [Azorhizobium caulinodans ORS 571] Length = 313 Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats. Identities = 121/300 (40%), Positives = 162/300 (54%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR SPLAL A R +L P +I I + T GD I +R L+E GGKGLFT+E Sbjct: 14 IGTRGSPLALWQAHAVRDALAAALARPVESISITVIRTSGDSIQDRALSEAGGKGLFTKE 73 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE++L+ G ID AVHSAKDM T L GL +S +LPR D+RD I +SL DL + I Sbjct: 74 IEEQLLDGRIDLAVHSAKDMATALPDGLFLSGFLPRADVRDALILREGKSLADLPAGARI 133 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+SLRR+A L R R D+ V RG + TRL K+ LLA AG+ RL Sbjct: 134 GTASLRREAQLRRLRPDLDVSLLRGNVHTRLAKVREGTFDGTLLALAGLTRLGLAHEASA 193 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L+ + F P+ GQGA+ IE+ V + + I T ++ ERA L LDGSC++ Sbjct: 194 VLDTDAFLPAVGQGAVAIESRVGDEATNGAIAAIACRATGIALAAERALLTALDGSCRTP 253 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307 I G A +G + G++L+ DG+ E DA +G D +R + Sbjct: 254 IGGLATVEGDMVRLRGLILSPDGRDAAEADETAPVSDAARLGADMGARLRATAPARALGL 313 >gi|295109819|emb|CBL23772.1| hydroxymethylbilane synthase [Ruminococcus obeum A2-162] Length = 308 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 97/298 (32%), Positives = 161/298 (54%), Gaps = 8/298 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + IG+R S LA+ + R + H P ++ I+ + T GD+I +RTL ++GGKG Sbjct: 7 QNKVIIGSRESRLAVLQSEMVRDYIKTQH--PELDVEILTMKTTGDKILDRTLDKVGGKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E++K L+ G +VHS KDMP ++ L + A+ RED RDV + S +L Sbjct: 65 LFVKELDKALLEGRTMLSVHSLKDMPMEVPGELPLLAFSKREDPRDVLVLPEGVS--ELD 122 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 L +G SSLRR L ++ V RG ++TRL KL+N + ++LA AG+KRL E Sbjct: 123 LTKPLGCSSLRRTLQLKELYPEMEVKSIRGNLQTRLRKLDNGEYSGLILAAAGLKRLGLE 182 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + ++ P+ GQG + ++ + + ++ E W + + ERAF+ L+G Sbjct: 183 NRICRYFSEDEILPAAGQGILAVQGRQD--LTYDYLEGYRDEKAWFAGSAERAFVKYLNG 240 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLAS-DGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 C S +A + +G L+ G+ DG+ + + S G + +A +GRD A+ ++ + Sbjct: 241 GCSSPVAAYGVVEGDELFLRGLYYRECDGR-YFKDSIRGPKSEAEKLGRDLAKRMQDM 297 >gi|260494552|ref|ZP_05814682.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_33] gi|260197714|gb|EEW95231.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_33] Length = 302 Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats. Identities = 110/303 (36%), Positives = 148/303 (48%), Gaps = 7/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60 KK IG+R S LALA A + L + P I + T GD+ N +++ Sbjct: 2 KKNIIIGSRGSILALAQADFIKDKLQINY--PNLTFTIKEIVTSGDKDLKSNWENSDVSL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE+ L+ G+ID AVHS KDMP KGL A RED RDV +S L Sbjct: 60 KSFFTKEIEQGLLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDARDVLVSKNG-FLVT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 LPQGAKIGTSSLRRAMNLKAIRPDFEIKHLRGNIHTRLKKLEIEDYDAIVLAAAGLKRTG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E L+ E FPP+P QG + I+ N+ + +E++K I++E+ V ER F Sbjct: 179 MTDKITEYLSGEVFPPAPAQGVLYIQCRENDKEIKEILKTIHNENVAKIVEIEREFSKIF 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DG C + + ++ G + F V + GK + I AA+ I+ Sbjct: 239 DGGCHTPMGCYSQVNGDKIKFTA-VYSDKGKQ-IRAVIEDDLTKGKEIAYMAAEKIKNKI 296 Query: 301 NKN 303 NK Sbjct: 297 NKG 299 >gi|328863687|gb|EGG12786.1| hypothetical protein MELLADRAFT_114915 [Melampsora larici-populina 98AG31] Length = 430 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 106/333 (31%), Positives = 150/333 (45%), Gaps = 33/333 (9%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P IGTR S LAL A R H P H I +ST GD+ R L +GGK L+ Sbjct: 44 PIVIGTRNSRLALVQAELVRKLFEISH--PNHPTTIQSMSTAGDQNQGRPLYLMGGKSLW 101 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDL 121 T+E+E L+ G +D VH KDMPT L G ++ A L RED RD + +SL +L Sbjct: 102 TKELEVALLEGSVDLIVHCLKDMPTSLPPGCELGAILEREDPRDALVIRRDLPFRSLSEL 161 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRL 179 SVIGTSS+RR A L R + D RG + TR KL ++ I+LA AG+ RL Sbjct: 162 PAGSVIGTSSVRRVAQLRRRFPQLKFQDIRGNLNTRFRKLDAPDSPYTGIVLAVAGLNRL 221 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK-------------AQELVKVINHEDT 226 + I L+ + + GQGAI IE + ++LVK + H T Sbjct: 222 ECADRISSYLSPPELYYAVGQGAIGIEIRSRAEEGEVTPRASQRTETVRQLVKSLEHWPT 281 Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYC----------KGSTLYFYGIVLASDGKIFHEV 276 + ER+ L L+G C + + + L G+V + DG V Sbjct: 282 ALVCHAERSLLRTLEGGCSVPVGVTSTLLPLPMPCQWAPQARLTLTGVVTSVDGTKEVMV 341 Query: 277 SRNGN---RCDAINIGRDAAQYIRFISNKNVFN 306 ++ + D+I +G + A + + Sbjct: 342 TKTADIYGPKDSIKLGCELAAELLEAGADEILE 374 >gi|328350818|emb|CCA37218.1| hydroxymethylbilane synthase [Pichia pastoris CBS 7435] Length = 376 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 95/316 (30%), Positives = 148/316 (46%), Gaps = 17/316 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++G+R S LA+ A R + + + P ++ +ST GD++ N+ L GGK L+T Sbjct: 47 LKLGSRKSALAIIQAEIVRQLI--LKEYPELETKLVSVSTLGDQVQNKALFTFGGKSLWT 104 Query: 66 EEIEKKLIS-----GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117 +E+E L+ +ID VHS KDMPT L ++ + RED RD + +S Sbjct: 105 KELEMLLLESVGGFDQIDMIVHSLKDMPTHLPDEFELGCIIEREDPRDALVVQDGLSYKS 164 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAG 175 L DL +V+GTSS+RR A LL+ + RG ++TRL KL +++ +LLA AG Sbjct: 165 LADLPEGAVVGTSSVRRSAQLLKNFPHLKFKSVRGNLQTRLRKLDDPDSEYCCLLLAAAG 224 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + R + I LN + S GQGA+ +E + + + + I H T ERA Sbjct: 225 LIRTGLQHRISMYLNDDVMYHSVGQGALGVEIRKGDQFMKNICEKIGHRTTTLRCLAERA 284 Query: 236 FLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRN---GNRCDAINIGR 290 L L+G C I T L +V++ +G+ S A + G Sbjct: 285 LLRYLEGGCSVPIGVSTIYSEDTKELTMNSLVVSCNGRDSVTESMTEVVTTEEQAEDFGE 344 Query: 291 DAAQYIRFISNKNVFN 306 AQ + K + + Sbjct: 345 RLAQKLIDQGAKRILD 360 >gi|294782423|ref|ZP_06747749.1| hydroxymethylbilane synthase [Fusobacterium sp. 1_1_41FAA] gi|294481064|gb|EFG28839.1| hydroxymethylbilane synthase [Fusobacterium sp. 1_1_41FAA] Length = 301 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 113/303 (37%), Positives = 149/303 (49%), Gaps = 7/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60 KK IGTR S LALA A ++SL + P I + T GD+ N + Sbjct: 2 KKNIIIGTRGSILALAQANLVKTSLEANY--PDLTFEIKEIVTSGDKDLKSNWENSNASL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV IS L Sbjct: 60 KSFFTKEIEQELLDGQIDIAVHSMKDMPAVSPKGLICGAIPDREDARDVLISKNG-FLVT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 LPQGAKIGTSSLRRVMNLKAIRPDFEIKHLRGNIHTRLKKLETEDYDAIILAAAGLKRTG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E L+ E FPP+P QG + I+ N+ + + ++K I++E+ V ER F Sbjct: 179 MADKITEYLSGEAFPPAPAQGVLYIQCRENDEEIKGILKSIHNENIAKIVEIEREFSKIF 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DG C + + ++ + F G + DGK V + I AA+ I+ Sbjct: 239 DGGCHTPMGCYSQVDEDKIKFIGAY-SHDGKQ-IRVVIEDDLAKGKEIAHMAAEEIKAKI 296 Query: 301 NKN 303 NK Sbjct: 297 NKG 299 >gi|123210215|emb|CAM15095.1| hydroxymethylbilane synthase [Danio rerio] Length = 358 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 111/336 (33%), Positives = 159/336 (47%), Gaps = 34/336 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + R+GTR S LA +L ++ P ++ I+ +ST GD+I + L++IG K Sbjct: 15 ASRVIRMGTRKSQLARIQTDSVAGTLKQLY--PDVHLEIVAMSTIGDKILDTALSKIGEK 72 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118 LFT+E+E L E+D VHS KD+PT L G I A L RE+ D + H +L Sbjct: 73 SLFTKELENALERNEVDIVVHSLKDLPTSLPPGFTIGAILERENPHDAVVLHPKNAGLTL 132 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIK 177 L SVIGTSSLRR A L + + + RG + TRL KL+ AI+LA AG+K Sbjct: 133 DSLPEKSVIGTSSLRRAAQLKKRFPQLEFENIRGNLNTRLKKLDEKDDYAAIILAAAGLK 192 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ E I ++L ED + GQGA+ +E + E+V V++H DT ERAFL Sbjct: 193 RMGWESRISQVLGPEDCMYAVGQGALAVEVRAQDKDILEMVSVLHHPDTVLRCISERAFL 252 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR------------------- 278 +L+G C +A KGS LY G V + DG + + Sbjct: 253 KQLEGGCSVPVAVHTEVKGSMLYLTGAVYSLDGADCLKDTMQTCVELDNKVNESTQRSAN 312 Query: 279 ---------NGNRCDAINIGRDAAQYIRFISNKNVF 305 + A +G D A + K++ Sbjct: 313 VGVTACNISSSALEAAEKLGLDLANVLLNKGAKDIL 348 >gi|83815900|ref|YP_445675.1| porphobilinogen deaminase [Salinibacter ruber DSM 13855] gi|83757294|gb|ABC45407.1| porphobilinogen deaminase [Salinibacter ruber DSM 13855] Length = 323 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 100/305 (32%), Positives = 165/305 (54%), Gaps = 7/305 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +GTR S LAL A RS L H + + ++T+GD T+ ++EIG + +F Sbjct: 6 PLVLGTRGSELALRQANVVRSRLEAA----GHRVELETITTRGDEATDTPISEIGDEAVF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS--LKDLA 122 T+E+++ L+ G +D AVHS KD+P+ + GL ++A RED RD F++H + L DL Sbjct: 62 TKELDRALLQGGVDLAVHSLKDIPSTVPSGLALAAIGEREDPRDAFVAHPSFDGHLHDLP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + + T+SLRR A LL WRSD+ V+ RG ++TRL KL + ++LA AG+ RL Sbjct: 122 EGATVATASLRRTAQLLTWRSDLEVVPVRGNVDTRLEKLGESDWTGMVLAVAGLVRLGLS 181 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV-INHEDTWDSVNCERAFLAELD 241 I++ ++ P+ GQGA+ I + ++L++ ++H + + N ERAFL ++ Sbjct: 182 LHIRDRIDPSLIVPAVGQGALGIACREDQDALRDLLRETLHHAPSGHAANAERAFLKKVG 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ + +A+ TL + A DG + R D +GR A + + Sbjct: 242 GGCQVPLGAWAHIDDGTLVLDACIAALDGSEHYRDERRCAPEDGAAVGRKLAADLLAMGG 301 Query: 302 KNVFN 306 ++ + Sbjct: 302 DHILD 306 >gi|305665660|ref|YP_003861947.1| porphobilinogen deaminase [Maribacter sp. HTCC2170] gi|88710417|gb|EAR02649.1| porphobilinogen deaminase [Maribacter sp. HTCC2170] Length = 529 Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats. Identities = 101/311 (32%), Positives = 152/311 (48%), Gaps = 13/311 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A ++ L + H ++P+ + GD + ++ L E+G Sbjct: 1 MS-KIIRIGTRDSELALWQANAVKNQLEAL----GHQTTLVPVKSTGDIVLDKPLYELGV 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ +++G+ID AVHS KD+PT L KG+ +A L R + D+ + + Sbjct: 56 TGIFTKTLDVAMLNGDIDIAVHSMKDVPTALPKGIVQAAVLKRANYLDILAYNDNEEFLG 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 ++I T SLRRKA L +V+D RG I +R+ KLN+N + + A AG+ R+ Sbjct: 116 -GRDAIIATGSLRRKAQWLNRYPTHTVVDLRGNINSRMQKLNDNDWNGAIFAAAGLDRIG 174 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E + + P+P QGAI + N+ E +NHE T ER FL L Sbjct: 175 LEHENT--IGLTWMVPAPAQGAIMVVALENDEYVLEACAQMNHEATEICTGLEREFLRIL 232 Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C + I AY K + G++L+ DGK E N+ RD A I Sbjct: 233 EGGCTAPIGALAYINKEEEVKLKGVLLSLDGKKRLEAEFAEPLGKHQNMARDCANSILAR 292 Query: 300 SNK----NVFN 306 K + N Sbjct: 293 GGKRLMGEILN 303 >gi|198462481|ref|XP_001352446.2| GA21587 [Drosophila pseudoobscura pseudoobscura] gi|198150842|gb|EAL29942.2| GA21587 [Drosophila pseudoobscura pseudoobscura] Length = 630 Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats. Identities = 98/297 (32%), Positives = 149/297 (50%), Gaps = 16/297 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K Sbjct: 4 QEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQRFEIHTMSTFGDRVLNVSLPKIGEK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + ++ Sbjct: 62 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFQGHTI 121 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 L SVIGTSSLRR A + R + V D RG + TRL KL+ +++ I+LA AG+ Sbjct: 122 ASLPQGSVIGTSSLRRTAQIRRLYPHLIVCDIRGNLNTRLAKLDAADSRFAGIILAQAGL 181 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+F Sbjct: 182 VRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDVQVLAMLQKLMCLNTTCRILAERSF 241 Query: 237 LAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCD 284 L L G C + +A ++ +G L G V + DG I + + Sbjct: 242 LKTLGGGCSAPVAVWSNLQGEPLNANSQDVGLSLTGAVWSLDGAIEIRNHLSCALSE 298 >gi|56416851|ref|YP_153925.1| porphobilinogen deaminase [Anaplasma marginale str. St. Maries] gi|56388083|gb|AAV86670.1| porphobilinogen deaminase [Anaplasma marginale str. St. Maries] Length = 303 Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats. Identities = 100/298 (33%), Positives = 161/298 (54%), Gaps = 2/298 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M R+GTR S LAL A E ++++ P + + + T GD +R L +IGG Sbjct: 1 MYAPVVRLGTRGSTLALIQAEEVKAAIAA--HFPEVRVDVTKIKTSGDIKVDRPLCDIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L++ +ID AVHSAKD+P + L + L R DVFIS +SL Sbjct: 59 KGLFIKEIEEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSS+RRK LL +R D+ + RG ++TR+ K+ + + I+LA AG+ R+ Sbjct: 119 LPAGAKIGTSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRIS 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E+L+ + + GQGAIC++ ++ ++ +N +++ +V ER+F+ + Sbjct: 179 ARAKITEVLHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAV 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +GSC + +A A S L +LA D + R DA ++G + ++ Sbjct: 239 NGSCHTPLAAMARYVDSGLMSMKCMLAHDSRTMVSAERTFPERDAESVGFEMGVMLKD 296 >gi|325282435|ref|YP_004254976.1| Porphobilinogen deaminase [Deinococcus proteolyticus MRP] gi|324314244|gb|ADY25359.1| Porphobilinogen deaminase [Deinococcus proteolyticus MRP] Length = 310 Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats. Identities = 100/307 (32%), Positives = 160/307 (52%), Gaps = 5/307 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR--TLTEIGGK 61 + +GTR S LAL+ L + + P I ++TKGD+ ++ + G K Sbjct: 2 RTVTVGTRGSTLALSQTRWVVERLKE--QWPETEFRIQTITTKGDKNRASLQSMAKAGDK 59 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKD 120 G + +EI+ L++ ID AVHS KD+PT+ +GL I++ R D RDV + +SL D Sbjct: 60 GFWIKEIQDALLAKSIDIAVHSLKDLPTEQTEGLDIASIPKRADARDVLVGAEGFKSLAD 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSS+RR+A L +R D+ VI RG IETR+ + ++ A++LA AG+ R Sbjct: 120 LPQGARIGTSSVRRRAFLKAFRPDLQVIPVRGNIETRMAAVASDDYDAVILAGAGLIRTD 179 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + E ++ + P+PGQGA+ +E ++ E+ IN T D + ER FLA L Sbjct: 180 QRHRADEFVSTDILLPAPGQGALALEVRADDDLIAEVAYAINDAVTDDRITAEREFLAGL 239 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C + + FA KG L G V A DG + + +G+ + ++G + A+ + Sbjct: 240 GAGCLAPVGAFATVKGDLLTLEGWVGAVDGSEVIKATTSGDASECADLGAELAEDMLSQG 299 Query: 301 NKNVFNF 307 + + Sbjct: 300 AQRLIEM 306 >gi|222475216|ref|YP_002563632.1| porphobilinogen deaminase (hemC) [Anaplasma marginale str. Florida] gi|255003192|ref|ZP_05278156.1| porphobilinogen deaminase [Anaplasma marginale str. Puerto Rico] gi|269958734|ref|YP_003328521.1| porphobilinogen deaminase [Anaplasma centrale str. Israel] gi|222419353|gb|ACM49376.1| porphobilinogen deaminase (hemC) [Anaplasma marginale str. Florida] gi|269848563|gb|ACZ49207.1| porphobilinogen deaminase [Anaplasma centrale str. Israel] Length = 303 Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats. Identities = 100/298 (33%), Positives = 161/298 (54%), Gaps = 2/298 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M R+GTR S LAL A E ++++ P + + + T GD +R L +IGG Sbjct: 1 MYAPVVRLGTRGSTLALIQAEEVKAAIAA--HFPEVRVDVTKIKTSGDVKVDRPLCDIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L++ +ID AVHSAKD+P + L + L R DVFIS +SL Sbjct: 59 KGLFIKEIEEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSS+RRK LL +R D+ + RG ++TR+ K+ + + I+LA AG+ R+ Sbjct: 119 LPAGAKIGTSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRIS 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E+L+ + + GQGAIC++ ++ ++ +N +++ +V ER+F+ + Sbjct: 179 ARAKITEVLHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAV 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +GSC + +A A S L +LA D + R DA ++G + ++ Sbjct: 239 NGSCHTPLAAMARYVDSGLMSMKCMLAHDSRTMVSAERTFPERDAESVGFEMGVMLKD 296 >gi|156064079|ref|XP_001597961.1| hypothetical protein SS1G_00047 [Sclerotinia sclerotiorum 1980] gi|154690909|gb|EDN90647.1| hypothetical protein SS1G_00047 [Sclerotinia sclerotiorum 1980 UF-70] Length = 379 Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats. Identities = 97/315 (30%), Positives = 146/315 (46%), Gaps = 15/315 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IGTR S LA+ + +++L H P N I L T GD+ L + G K L+ Sbjct: 52 TIHIGTRKSALAMVQTEQVKAALEKAH--PNLNFEITKLETMGDKNQVTALHDFGAKSLW 109 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T E+E L+ +D VH KDMPT+L + I A L RED RD I ++L +L Sbjct: 110 THELEALLLERNLDIVVHCLKDMPTQLPQKCTIGAILEREDPRDALIMKAGSNYKTLSEL 169 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRL 179 SV+GTSS+RR A + ++ + RG I TRLNKL ++ K ++LA AG+ R+ Sbjct: 170 PAGSVVGTSSVRRSAQIAMKYPELKFENARGNIGTRLNKLDADDGKYSCLILAAAGLLRM 229 Query: 180 KKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + I + L+ + + GQGA+ +E + + +V + HE T + ER+ Sbjct: 230 GWGERITQYLDSKTEGGGMLHAVGQGALALEVRDGDEEINTMVSALQHEPTQLAGLAERS 289 Query: 236 FLAELDGSCKSAIAG-FAYCKGSTLYFYGIVLASDGKIFHEVSR---NGNRCDAINIGRD 291 + L+G C I + + L IV++ DG E R DA G Sbjct: 290 LMRTLEGGCSVPIGVETTWIEKGKLLMKAIVVSLDGTESVESERLEEILTPKDADEFGWT 349 Query: 292 AAQYIRFISNKNVFN 306 AQ + + Sbjct: 350 IAQDLVSKGAAKILE 364 >gi|168703144|ref|ZP_02735421.1| porphobilinogen deaminase [Gemmata obscuriglobus UQM 2246] Length = 299 Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats. Identities = 102/297 (34%), Positives = 155/297 (52%), Gaps = 2/297 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P ++GTR SPLAL A L V + P + ++ + T GDR L+ +GG G+F Sbjct: 4 PLKLGTRGSPLALWQANYIAELLRPV--VAPRPVELVLIETHGDRDQASALSAMGGFGVF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+ I+ L+ G D AVHS KD+PT L+++A PR D F+S + DL Sbjct: 62 TKAIQNALLDGRADVAVHSLKDLPTIPEPRLELAAVPPRGPTGDAFVSRKHKRFDDLHPG 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A +L R D+ ++D RG ++TRL KL++ AI+LA AG+ RL Sbjct: 122 ATVGTSSLRRRAQVLNRRPDLKLLDLRGNVDTRLRKLDDLGLDAIVLAEAGLARLGLADR 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I EIL+ P+ GQGAI +E ++ + + ++ + E T+ V ERA L L G C Sbjct: 182 ITEILDPSWMLPAVGQGAIGLECRSDDGETKLVLAQVRCESTFARVQAERAMLYALGGGC 241 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 I + L G VL+ DG+ + G +++G++ A + Sbjct: 242 LVPIGATSKVLDGVLTVRGAVLSPDGRRRIVGTHEGLMRAPLSVGQELAGILLAEGA 298 >gi|254564213|ref|YP_003071308.1| Porphobilinogen deaminase [Methylobacterium extorquens DM4] gi|254271491|emb|CAX27506.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Methylobacterium extorquens DM4] Length = 294 Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats. Identities = 112/292 (38%), Positives = 163/292 (55%), Gaps = 3/292 (1%) Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74 +ALA R ++ + P I+ +ST DR+ +R L+EIGGKGLFT+E+E+ L + Sbjct: 1 MALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIGGKGLFTKELEQALFA 58 Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKDLALHSVIGTSSLR 133 EID AVHS KD+ T L GL I+ L R+D RD F+S + L DL + +GTSSLR Sbjct: 59 DEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADLPPGARVGTSSLR 118 Query: 134 RKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIED 193 R A +L R D++++ RG TR+ KL + A LLA AG++RL V + +L++E+ Sbjct: 119 RGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGMANVARSVLSVEE 178 Query: 194 FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY 253 P+ QGA+ IE + + L+ + T +++ ER LAELDGSC++ IA A Sbjct: 179 MLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELDGSCRTPIAALAQ 238 Query: 254 CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 G + G++ DG V R G DA IGRDA ++ + F Sbjct: 239 VSGDRISLDGLLFLPDGSRHWAVHREGLAADADAIGRDAGAELKRAAGDVYF 290 >gi|255004322|ref|ZP_05279123.1| porphobilinogen deaminase [Anaplasma marginale str. Virginia] Length = 303 Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats. Identities = 100/298 (33%), Positives = 162/298 (54%), Gaps = 2/298 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M R+GTR S LAL A E ++++ + P + + + T GD +R L +IGG Sbjct: 1 MHAPVVRLGTRGSTLALIQAEEVKAAIAA--RFPEVRVDVTKIKTSGDVKVDRPLCDIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L++ +ID AVHSAKD+P + L + L R DVFIS +SL Sbjct: 59 KGLFIKEIEEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSS+RRK LL +R D+ + RG ++TR+ K+ + + I+LA AG+ R+ Sbjct: 119 LPAGAKIGTSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRIS 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E+L+ + + GQGAIC++ ++ ++ +N +++ +V ER+F+ + Sbjct: 179 ARAKITEVLHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAV 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +GSC + +A A S L +LA D + R DA ++G + ++ Sbjct: 239 NGSCHTPLAAMARYVDSGLMSMKCMLAHDSRTMVFAERTFPERDAESVGFEMGVMLKD 296 >gi|254995040|ref|ZP_05277230.1| porphobilinogen deaminase [Anaplasma marginale str. Mississippi] Length = 303 Score = 318 bits (816), Expect = 7e-85, Method: Composition-based stats. Identities = 100/298 (33%), Positives = 161/298 (54%), Gaps = 2/298 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M R+GTR S LAL A E ++++ P + + + T GD +R L +IGG Sbjct: 1 MYAPVVRLGTRGSTLALIQAEEVKAAIAA--HFPEVRVDVTKIKTSGDVKVDRPLCDIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L++ +ID AVHSAKD+P + L + L R DVFIS +SL Sbjct: 59 KGLFIKEIEEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSS+RRK LL +R D+ + RG ++TR+ K+ + + I+LA AG+ R+ Sbjct: 119 LPAGAKIGTSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRIS 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E+L+ + + GQGAIC++ ++ ++ +N +++ +V ER+F+ + Sbjct: 179 ARAKITEVLHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAV 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +GSC + +A A S L +LA D + R DA ++G + ++ Sbjct: 239 NGSCHTPLAAMARYVDSGLMSMKCMLAHDSRTMVFAERTFPERDAESVGFEMGVMLKD 296 >gi|195586907|ref|XP_002083209.1| GD13613 [Drosophila simulans] gi|194195218|gb|EDX08794.1| GD13613 [Drosophila simulans] Length = 651 Score = 318 bits (815), Expect = 8e-85, Method: Composition-based stats. Identities = 101/316 (31%), Positives = 152/316 (48%), Gaps = 21/316 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K Sbjct: 4 QEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKIGEK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + ++ Sbjct: 62 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHTI 121 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 L SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA AG+ Sbjct: 122 ASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQAGL 181 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+F Sbjct: 182 VRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERSF 241 Query: 237 LAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 L L G C + +A ++ KG L G V + DG I + Sbjct: 242 LKTLGGGCSAPVAVWSNLKGEPLNGNSQEVGLSLTGAVWSLDGAIEIRNHLACALNE--- 298 Query: 288 IGRDAAQYIRFISNKN 303 + R + Sbjct: 299 --QKLEGDQRKRGAQE 312 >gi|313680762|ref|YP_004058501.1| hydroxymethylbilane synthase [Oceanithermus profundus DSM 14977] gi|313153477|gb|ADR37328.1| hydroxymethylbilane synthase [Oceanithermus profundus DSM 14977] Length = 303 Score = 318 bits (815), Expect = 8e-85, Method: Composition-based stats. Identities = 104/303 (34%), Positives = 147/303 (48%), Gaps = 8/303 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +GTR S LAL L + P I + TKGDR + I Sbjct: 2 RVIVVGTRGSLLALTQTRWAVERLKE--NWPETEFKIKTIQTKGDRGADPREQNI----- 54 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122 F E+E+ L GEID AVHS KD+PT +GL I+ R D RDVFI + DL Sbjct: 55 FVGELEEALRRGEIDIAVHSLKDLPTTQPEGLVIAGVPRRVDPRDVFIGRNSVARMADLP 114 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IGTSS+RR+A LL WR D+ ++ RG +++RL +L + I+LA AG+ RL+ Sbjct: 115 KGARIGTSSVRRRAQLLAWRDDLEIVPLRGNVDSRLKRLVSEDLDGIILAAAGLLRLEMR 174 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E ++ E P+PGQGA+ +E + A EL +NH T V ER FL L Sbjct: 175 NRIGEFVDPEILLPAPGQGALALEVREGDDMADELAYSLNHAPTRARVLAERGFLHGLGA 234 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C + + A + L VL+ DGK G+ +A +G + A+ + + Sbjct: 235 GCLAPVGALAQIEDDVLVLDAGVLSLDGKTLIRGEIEGDPEEAWELGLELARDVLEAGGR 294 Query: 303 NVF 305 V Sbjct: 295 EVL 297 >gi|41056087|ref|NP_957448.1| hydroxymethylbilane synthase a [Danio rerio] gi|31419559|gb|AAH53268.1| Hydroxymethylbilane synthase a [Danio rerio] Length = 358 Score = 318 bits (815), Expect = 8e-85, Method: Composition-based stats. Identities = 111/336 (33%), Positives = 158/336 (47%), Gaps = 34/336 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + R+GTR S LA +L ++ P + I+ +ST GD+I + L++IG K Sbjct: 15 ASRVIRMGTRKSQLARIQTDSVAGTLKQLY--PDVRLEIVAMSTIGDKILDTALSKIGEK 72 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118 LFT+E+E L E+D VHS KD+PT L G I A L RE+ D + H +L Sbjct: 73 SLFTKELENALERNEVDIVVHSLKDLPTSLPPGFTIGAILERENPHDAVVLHPKNAGLTL 132 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIK 177 L SVIGTSSLRR A L + + + RG + TRL KL+ AI+LA AG+K Sbjct: 133 DSLPEKSVIGTSSLRRAAQLKKRFPQLEFENIRGNLNTRLKKLDEKDDYAAIILAAAGLK 192 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ E I ++L ED + GQGA+ +E + E+V V++H DT ERAFL Sbjct: 193 RMGWESRISQVLGPEDCMYAVGQGALAVEVRAQDKDILEMVSVLHHPDTVLRCISERAFL 252 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR------------------- 278 +L+G C +A KGS LY G V + DG + + Sbjct: 253 KQLEGGCSVPVAVHTEVKGSMLYLTGAVYSLDGADCLKDTMQTCVELDNKVNESTQRSAN 312 Query: 279 ---------NGNRCDAINIGRDAAQYIRFISNKNVF 305 + A +G D A + K++ Sbjct: 313 VGVTACNISSSALEAAEKLGLDLANVLLNKGAKDIL 348 >gi|34762659|ref|ZP_00143651.1| Porphobilinogen deaminase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887680|gb|EAA24757.1| Porphobilinogen deaminase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 302 Score = 318 bits (815), Expect = 8e-85, Method: Composition-based stats. Identities = 109/303 (35%), Positives = 149/303 (49%), Gaps = 7/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60 KK IG+R S LALA A + L + P I + T GD+ N ++I Sbjct: 2 KKNIIIGSRGSILALAQANLIKDKLQINY--PNLTFTIKEIVTSGDKDLKSNWENSDISL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDARDVLVSKNG-FLVT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 LPQGAKVGTSSLRRAMNLKAIRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRTG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E LN E FPP+P QG + I+ N+ + ++++K I+++ V ER F Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKKILKSIHNKAVAKIVEIEREFSKIF 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DG C + + ++ G + F + L GK + + I AA+ I+ Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTAVYLDE-GKQ-IKAVVEDDLAKGKEIAYMAAEEIKNKI 296 Query: 301 NKN 303 NK Sbjct: 297 NKG 299 >gi|194864825|ref|XP_001971126.1| GG14785 [Drosophila erecta] gi|190652909|gb|EDV50152.1| GG14785 [Drosophila erecta] Length = 650 Score = 318 bits (815), Expect = 9e-85, Method: Composition-based stats. Identities = 100/316 (31%), Positives = 151/316 (47%), Gaps = 21/316 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++ R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K Sbjct: 4 QENVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKIGEK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + ++ Sbjct: 62 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRDNFKGHTI 121 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 L SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA AG+ Sbjct: 122 ASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQAGL 181 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+F Sbjct: 182 VRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERSF 241 Query: 237 LAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 L L G C + +A ++ KG L G V + DG I + Sbjct: 242 LKTLGGGCSAPVAVWSNLKGEPLNGNSQEVGLSLTGAVWSLDGAIEIRNHLACALNE--- 298 Query: 288 IGRDAAQYIRFISNKN 303 + R + Sbjct: 299 --QKLEGEQRKRGAQE 312 >gi|317122098|ref|YP_004102101.1| porphobilinogen deaminase [Thermaerobacter marianensis DSM 12885] gi|315592078|gb|ADU51374.1| porphobilinogen deaminase [Thermaerobacter marianensis DSM 12885] Length = 335 Score = 318 bits (815), Expect = 9e-85, Method: Composition-based stats. Identities = 111/322 (34%), Positives = 168/322 (52%), Gaps = 19/322 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR S LA A L H P + ++P++T GDR R L + Sbjct: 1 MTAPVVRIGTRASALARIQAQWVARELQRHH--PGLQVELVPVTTHGDRHRARPLYTLDT 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS--- 117 G F +E+E+ L +G ID AVHSAKD+PT+L +GL+++A+ RED D + +Q Sbjct: 59 PGAFVKELEEALRAGIIDLAVHSAKDVPTRLPEGLELAAFPQREDPGDALVLPRSQEGLG 118 Query: 118 --------------LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN 163 L+ L + +GTSSLRR+A L R D+ V RG ++TRL +L+ Sbjct: 119 PNGRDAGRGAGMTALELLPPGARVGTSSLRRQAWLRARRPDLKVEPARGNLDTRLRRLDE 178 Query: 164 NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223 A++LA AG++RL I + P+PGQGA+ +E ++ + LV+V++ Sbjct: 179 GAWDALVLAAAGLRRLGVGHRITAAIPPRALLPAPGQGALAVEIRASDDATRRLVQVLDR 238 Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283 + +V ERAFLAEL G+C+ + +A +G L G+V A DG + E G Sbjct: 239 PEVALAVRAERAFLAELGGTCRIPLGAWARLEGPRLRLAGMVAAPDGDPWLEEEVEGPAT 298 Query: 284 DAINIGRDAAQYIRFISNKNVF 305 D +GR+ A+ +R ++V Sbjct: 299 DPEAVGRELAERLRARGAESVL 320 >gi|269926448|ref|YP_003323071.1| porphobilinogen deaminase [Thermobaculum terrenum ATCC BAA-798] gi|269790108|gb|ACZ42249.1| porphobilinogen deaminase [Thermobaculum terrenum ATCC BAA-798] Length = 300 Score = 318 bits (815), Expect = 9e-85, Method: Composition-based stats. Identities = 88/297 (29%), Positives = 150/297 (50%), Gaps = 4/297 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LAL + L ++ P + + DR + ++ IG G+ Sbjct: 2 KVIKVGTRGSKLALWQTQWVINRLRSLY--PGFQFEPVVIKVTSDRSPDAPISAIGQVGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT++IE+ L++G+I AVHS KD+PT G I+A+ RED RD + Q + DL Sbjct: 60 FTKDIEQALLAGDIHLAVHSLKDLPTLSTPGTVIAAFTEREDPRDCILWPKGQPMPDLN- 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +S +GTSS+RR AL+ + + +V++ RG ++TR+ K+ +L+AYA +KR+ Sbjct: 119 NSRVGTSSVRRSALVRSYWPNANVVNLRGNVDTRVRKMLEGNYDVVLMAYAAVKRMDL-P 177 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V + L ++ + PS GQG I ++ ++ + ++ IN + + ER+ + L G Sbjct: 178 VEFKPLPLDSWVPSAGQGIIAVQAREDDQQIIGMLNAINFFPSKVAYLAERSLMRALGGG 237 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C + +A L G+V A DG R A ++G A+ + + Sbjct: 238 CSMPVGAYAELHDGELSLIGMVAAPDGSQVVITRRVDTPDQADHLGERVAREMLDLG 294 >gi|294785256|ref|ZP_06750544.1| hydroxymethylbilane synthase [Fusobacterium sp. 3_1_27] gi|294486970|gb|EFG34332.1| hydroxymethylbilane synthase [Fusobacterium sp. 3_1_27] Length = 302 Score = 317 bits (814), Expect = 9e-85, Method: Composition-based stats. Identities = 107/303 (35%), Positives = 148/303 (48%), Gaps = 7/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60 KK IG+R S LALA A + L + P I + T GD+ N ++I Sbjct: 2 KKNIIIGSRGSILALAQANLIKDKLQINY--PNLTFTIKEIVTSGDKDLKSNWENSDISL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 LPQGAKVGTSSLRRAMNLKTVRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRTG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E L+ E FPP+P QG + I+ N+ + ++++K I+++ V ER F Sbjct: 179 MTDKITEYLSGEVFPPAPAQGVLYIQCRENDEEIKKILKSIHNKAVAKIVEIEREFSKIF 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DG C + + ++ G + F + L GK + + I A + I+ Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTAVYLDE-GKQ-IKAVVEDDLTKGKEIAYMATEEIKNKI 296 Query: 301 NKN 303 NK Sbjct: 297 NKG 299 >gi|238926756|ref|ZP_04658516.1| hydroxymethylbilane synthase [Selenomonas flueggei ATCC 43531] gi|238885288|gb|EEQ48926.1| hydroxymethylbilane synthase [Selenomonas flueggei ATCC 43531] Length = 289 Score = 317 bits (814), Expect = 1e-84, Method: Composition-based stats. Identities = 95/283 (33%), Positives = 151/283 (53%), Gaps = 3/283 (1%) Query: 24 RSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHS 83 ++ H P + + L+TKGDRI + L +IGGKGLFT+E+E+ ++ +D AVHS Sbjct: 2 AEAIKKEH--PSCCVELHELTTKGDRILDAPLAKIGGKGLFTKELEQAMLDDAVDLAVHS 59 Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS 143 KDMPT++ GL I A R D D F+S +++DL + + +GTSSLRR+A LL R Sbjct: 60 LKDMPTEVPDGLVIGAITTRLDPGDAFVSAHYAAVEDLPVGARVGTSSLRRRAQLLAVRP 119 Query: 144 DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAI 203 D+++ D RG + TRL KL+ + AI+LA AG+KRL E+ I+ IL P+ GQGA+ Sbjct: 120 DLTICDLRGNVNTRLAKLDAGEFDAIVLAAAGLKRLGFERRIRTILPRSVMLPAVGQGAL 179 Query: 204 CIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK-GSTLYFY 262 IE + ++ + + ERAFL ++G C+ + +A + Sbjct: 180 AIECRAGDAAILSAIEFLRDAGMTTAAQAERAFLRRVEGGCQIPVGVYAEVDANGQISID 239 Query: 263 GIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 ++ + DG+ +G A +G A+ + + + Sbjct: 240 AMIASVDGQRICRSDAHGAGEQAEALGTALAEELLDAGGREIL 282 >gi|154245106|ref|YP_001416064.1| porphobilinogen deaminase [Xanthobacter autotrophicus Py2] gi|154159191|gb|ABS66407.1| porphobilinogen deaminase [Xanthobacter autotrophicus Py2] Length = 317 Score = 317 bits (814), Expect = 1e-84, Method: Composition-based stats. Identities = 121/302 (40%), Positives = 172/302 (56%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLAL A +++L + I + + T GD+I +R L+E GGKGLFT Sbjct: 16 LRIGTRGSPLALWQAHAVQAALAVALGVEKEAIAVEVIKTSGDQIQDRALSEAGGKGLFT 75 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G +D AVHSAKD+ T L GL ++ YLPR D+RD I + +L DL + Sbjct: 76 KEIEEALLDGRVDLAVHSAKDVATVLPDGLHLAGYLPRADVRDALILKSGAALADLPAGA 135 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT+SLRR+A L R R D+ V RG + TRL K+ + A LLA AG+ RL + Sbjct: 136 KVGTASLRREAQLRRIRPDLKVELLRGNVHTRLAKVKDGDFDATLLALAGLTRLGMAQAA 195 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +L +DF P+ GQGA+ IE + +P + I DT ++ ERAFLA LDGSC+ Sbjct: 196 SCVLATDDFLPAVGQGAVAIECRIADPDTNAAIAAIACRDTGIALEAERAFLAALDGSCR 255 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG A +G ++ G+VL+ DG E++ DA +G + +R + Sbjct: 256 TPIAGLATVEGESVRLRGLVLSPDGSDAAEIAELAPIADAARLGAECGARLRTSAPARAL 315 Query: 306 NF 307 Sbjct: 316 GL 317 >gi|19703980|ref|NP_603542.1| porphobilinogen deaminase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|25453023|sp|Q8RFP5|HEM3_FUSNN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|19714161|gb|AAL94841.1| Porphobilinogen deaminase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 298 Score = 317 bits (814), Expect = 1e-84, Method: Composition-based stats. Identities = 109/299 (36%), Positives = 145/299 (48%), Gaps = 7/299 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60 KK IG+R S LALA A + L P + I + T GD+ N ++I Sbjct: 2 KKNIIIGSRGSILALAQANLVKDRLQ--GNYPNLSFEIKEIVTSGDKDLKSNWENSDISL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE++L+ GEID AVHS KDMP K L A RED RDV +S L Sbjct: 60 KSFFTKEIEQELLDGEIDIAVHSMKDMPAVSAKSLICGAIPDREDPRDVLVSKNGL-LVT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 LPQGAKVGTSSLRRAMNLKTVRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRTG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E LN E FPP+P QG + I+ N+ + +E++K I++E V ER F Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKEILKSIHNEAIAKIVEIEREFSKIF 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DG C + + ++ G + F + L GK + I AA+ I+ Sbjct: 239 DGGCHTPMGCYSQVNGDKIKFTAVYLDE-GKQ-IRAVVEDDLAKGKEIAYMAAEEIKNK 295 >gi|260588741|ref|ZP_05854654.1| hydroxymethylbilane synthase [Blautia hansenii DSM 20583] gi|260540923|gb|EEX21492.1| hydroxymethylbilane synthase [Blautia hansenii DSM 20583] Length = 296 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 91/297 (30%), Positives = 148/297 (49%), Gaps = 6/297 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + IG+R S LA+ + R + + + I+ + T GD+I +RTL +IGGKGL Sbjct: 2 RKVVIGSRESKLAVVQSEMVRDYIRE--NNADIQVEILTMKTTGDKILDRTLDKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E++K L+ + + +VHS KDMP ++ + L + A+ RED RDV + + L Sbjct: 60 FVKELDKALMERKTELSVHSLKDMPMEVPEELPLIAFSKREDPRDVLVLPKGVT--QLDT 117 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 IG SSLRR L D+ RG ++TRL KL++ + +LLA AG+KRL E Sbjct: 118 SKPIGCSSLRRILQLKEIFPDMECKSVRGNVQTRLKKLDDGEYSGLLLAAAGLKRLGLED 177 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I E+ P+ GQG + I+ + +K E+ + ERAF+ L+G Sbjct: 178 RIARYFEPEEMIPAAGQGILAIQGRKDVDY--SYLKGYGDENATYAALAERAFVRYLNGG 235 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C S +A A + + G+ + + + + G+ A +G A+ ++ S Sbjct: 236 CSSPVAAHARVEDGQIILRGLYYDENTGNYEKGLKKGSAEAAEELGISLAKELQERS 292 >gi|209155902|gb|ACI34183.1| Porphobilinogen deaminase [Salmo salar] Length = 358 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 108/334 (32%), Positives = 155/334 (46%), Gaps = 33/334 (9%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LA L ++ P ++ I+ +ST GD+I + L++IG K Sbjct: 17 NRVIRMGTRKSQLARIQTDYVAEKLKTLY--PDVHLEIVAMSTIGDKILDTALSKIGEKS 74 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119 LFT+E+E L E+D VHS KD+PT L G I A L RE D + H +L Sbjct: 75 LFTKELENALERNEVDLVVHSLKDLPTTLPNGFTIGAVLQRESPHDAVVLHPKNSGLTLD 134 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKR 178 L SVIGTSSLRR A L + + D RG + TRL KL+ + AI+LA AG+KR Sbjct: 135 TLPDGSVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDEKEDYAAIILAAAGLKR 194 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E + ++L ED + GQGA+ +E + E+V ++H +T ERAFL Sbjct: 195 MGWEARVSQVLGPEDCMYAVGQGALAVEVRARDCDILEMVSTLHHSETVLRCIAERAFLR 254 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-----GNRCD--------- 284 L+G C +A K S L G V + DG + + GN+ + Sbjct: 255 RLEGGCSVPVAVNTEVKDSVLSLTGAVYSLDGADSLKEAMETNVDPGNKLESAADIQHVG 314 Query: 285 -------------AINIGRDAAQYIRFISNKNVF 305 A +G D A + + Sbjct: 315 VTAHNVPQCAQVAAEKLGVDLADLLLSKGAMEIL 348 >gi|195336557|ref|XP_002034902.1| GM14404 [Drosophila sechellia] gi|194127995|gb|EDW50038.1| GM14404 [Drosophila sechellia] Length = 651 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 101/316 (31%), Positives = 152/316 (48%), Gaps = 21/316 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K Sbjct: 4 QEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKIGEK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + ++ Sbjct: 62 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHTI 121 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 L SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA AG+ Sbjct: 122 ASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQAGL 181 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+F Sbjct: 182 LRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERSF 241 Query: 237 LAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 L L G C + +A ++ KG L G V + DG I + Sbjct: 242 LKTLGGGCSAPVAVWSNLKGEPLNQNSQELGLSLTGAVWSLDGAIEIRNHLACALNE--- 298 Query: 288 IGRDAAQYIRFISNKN 303 + R + Sbjct: 299 --QKLEGDQRKRGAQE 312 >gi|255715311|ref|XP_002553937.1| KLTH0E10604p [Lachancea thermotolerans] gi|238935319|emb|CAR23500.1| KLTH0E10604p [Lachancea thermotolerans] Length = 336 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 98/320 (30%), Positives = 151/320 (47%), Gaps = 17/320 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E + RIG R S LA+ + E + + + ++ + L T GD++ ++ L GGK Sbjct: 10 EHQIVRIGGRKSKLAVIQSHEVKDLIER--EFSQYSCTVRALKTLGDQVQSKPLYSFGGK 67 Query: 62 GLFTEEIEKKLISG----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT--- 114 ++T+E+E L ID VHS KDMPT L G + A + R D D I Sbjct: 68 AVWTKELEDLLYEKDKEKRIDLIVHSLKDMPTLLPDGFLVGAIIKRVDPTDCIIMAKESP 127 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLA 172 ++L DL SV+GTSS+RR A L R + RG IETRL+KL++ I+LA Sbjct: 128 YKTLDDLPDGSVVGTSSIRRSAQLKRKYPKLVFESVRGNIETRLSKLDDPITPFSCIVLA 187 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 AG+ R+K I + L+ + GQGA+ IE ++P +++ IN ++T Sbjct: 188 TAGLLRVKLAHRITQRLDSSVMYHAVGQGALGIEIRSDDPWIAGILQKINDKETAICCFA 247 Query: 233 ERAFLAELDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVS----RNGNRCDAI 286 ER+ + L+G C I + L +V++ DG E R DAI Sbjct: 248 ERSLMRTLEGGCSVPIGVESNYDDTTKQLCLKAVVVSVDGTEAVEDEYTMTIEDMRQDAI 307 Query: 287 NIGRDAAQYIRFISNKNVFN 306 G+ A + K++ + Sbjct: 308 ICGQQLAHKMIKNGAKDILD 327 >gi|262067556|ref|ZP_06027168.1| hydroxymethylbilane synthase [Fusobacterium periodonticum ATCC 33693] gi|291378731|gb|EFE86249.1| hydroxymethylbilane synthase [Fusobacterium periodonticum ATCC 33693] Length = 302 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 108/295 (36%), Positives = 149/295 (50%), Gaps = 7/295 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60 KK +G+R S LALA A +++L + P + I + T GD+ N +++ Sbjct: 2 KKNIIMGSRGSILALAQANLVKNNLEANY--PELSFEIKEIVTSGDKDLKSNWENSDVSL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAVSPKGLICGAIPDREDPRDVLVSKNG-FLVT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 LPKGAKIGTSSLRRAMNLKAVRPDFEIKHLRGNIHTRLKKLEIEDYDAIVLAAAGLKRTG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E LN E FPP+P QG + I+ N+ + +E++K I++E V ER F Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKEILKSIHNEAVAKIVEIEREFSKIF 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 DG C + + ++ G + F V + +GK + N I AA+ Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTA-VYSDEGKQ-IKAVVEDNLAKGKEIAYMAAEE 291 >gi|20130425|ref|NP_612103.1| lethal (3) 02640 [Drosophila melanogaster] gi|7292071|gb|AAF47484.1| lethal (3) 02640 [Drosophila melanogaster] gi|77403925|gb|ABA81841.1| GH16723p [Drosophila melanogaster] gi|211938543|gb|ACJ13168.1| FI03834p [Drosophila melanogaster] gi|220951602|gb|ACL88344.1| l(3)02640-PA [synthetic construct] Length = 652 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 101/316 (31%), Positives = 152/316 (48%), Gaps = 21/316 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K Sbjct: 4 QEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKIGEK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + ++ Sbjct: 62 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHTI 121 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 L SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA AG+ Sbjct: 122 ASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQAGL 181 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+F Sbjct: 182 VRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERSF 241 Query: 237 LAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 L L G C + +A ++ KG L G V + DG I + Sbjct: 242 LKTLGGGCSAPVAVWSNLKGEPLNGNSQEVGLSLTGAVWSLDGAIEIRNHLACALNE--- 298 Query: 288 IGRDAAQYIRFISNKN 303 + R + Sbjct: 299 --QKLEGDQRKRGAQE 312 >gi|292670850|ref|ZP_06604276.1| hydroxymethylbilane synthase [Selenomonas noxia ATCC 43541] gi|292647471|gb|EFF65443.1| hydroxymethylbilane synthase [Selenomonas noxia ATCC 43541] Length = 271 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 94/264 (35%), Positives = 151/264 (57%), Gaps = 1/264 (0%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 ++TKGDRI + L +IGGKGLFT+E+E+ +++G+ID AVHS KDMPT++ KGL I A Sbjct: 1 MTTKGDRILDAPLAKIGGKGLFTKELEQAMLAGQIDIAVHSLKDMPTEIPKGLIIGAITK 60 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 R D D F+S S+++L + + +GTSSLRR+A LL R D+ ++D RG + TRL KL+ Sbjct: 61 RLDPGDAFVSVNYTSIEELPIGAKVGTSSLRRRAQLLAVRPDLQLLDLRGNVNTRLAKLD 120 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 AI+LA AG+KRL I+ IL+ P+ GQG + IE ++ + ++ ++ Sbjct: 121 AGDFDAIILAAAGLKRLGLGNRIRSILSQRMMLPAVGQGTLAIECRADDTRILSVIDFLH 180 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN 281 + + ERAFL ++G C+ + +A + L+ ++ + DG G+ Sbjct: 181 DRNMSAAAMAERAFLCRVEGGCQIPVGVYADLKEDGLLHVDAMIASVDGMRVCRSRCTGS 240 Query: 282 RCDAINIGRDAAQYIRFISNKNVF 305 A +G A+ + + + Sbjct: 241 AERAEELGISLAEELLDAGGREIL 264 >gi|169762720|ref|XP_001727260.1| porphobilinogen deaminase [Aspergillus oryzae RIB40] gi|83770288|dbj|BAE60421.1| unnamed protein product [Aspergillus oryzae] Length = 330 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 100/315 (31%), Positives = 157/315 (49%), Gaps = 13/315 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + P RIGTR S LA+ A R+ L + P + I L T GDR L G K Sbjct: 8 QPPLRIGTRRSNLAMVQAEGIRNCLQKI--APDRSFEIEALRTLGDRDQLTALYNFGAKS 65 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLK 119 L+T E+E+KL +GE+D VH KDMPT L +++A PR+D RD I SLK Sbjct: 66 LWTTELEEKLNAGELDVIVHCLKDMPTSLPDSCELAAIPPRDDPRDALIVKAGLPYTSLK 125 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177 L +V+GTSS+RR A L R + + RG +ETRL K++ +++ ++++ AG++ Sbjct: 126 SLPEGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDNSDSEYTCMVMSAAGLE 185 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R+ E I + L +D + GQGA+ +E + K QEL+ + + + + ER+ Sbjct: 186 RVGLEHRISQYLGSKDGGILHAVGQGALGLEIRKGDRKMQELLGQLADQQSTLACLAERS 245 Query: 236 FLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRD 291 + L+G C + I L + IV++ DG E + N +A +G++ Sbjct: 246 LMRTLEGGCSAPIGVETEWISAGALSIHAIVVSLDGTKSVEDTIVSNVKTVEEATALGKE 305 Query: 292 AAQYIRFISNKNVFN 306 A + + N Sbjct: 306 LAARLVKAGAGEILN 320 >gi|237742175|ref|ZP_04572656.1| porphobilinogen deaminase [Fusobacterium sp. 4_1_13] gi|229429823|gb|EEO40035.1| porphobilinogen deaminase [Fusobacterium sp. 4_1_13] Length = 302 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 148/303 (48%), Gaps = 7/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60 KK IG+R S LALA A + L + P I + T GD+ N ++I Sbjct: 2 KKNIIIGSRGSILALAQANLIKDKLQINY--PNLTFTIKEIVTSGDKDLKSNWENSDISL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L Sbjct: 60 KSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 LPQGAKVGTSSLRRAMNLKTVRPDFEIKHLRGNIHTRLKKLETENYDAIVLAAAGLKRTG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E LN E FPP+P QG + I+ N+ + ++++K I+++ V ER F Sbjct: 179 LADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKKILKSIHNKAVAKIVEIEREFSKIF 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DG C + + ++ G + F + L GK + + I A + I+ Sbjct: 239 DGGCHTPMGCYSQINGDKIKFTAVYLDE-GKQ-IKAVVEDDLAKGKEIAHMATEEIKNKI 296 Query: 301 NKN 303 NK Sbjct: 297 NKG 299 >gi|161527999|ref|YP_001581825.1| porphobilinogen deaminase [Nitrosopumilus maritimus SCM1] gi|238054422|sp|A9A1A1|HEM3_NITMS RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|160339300|gb|ABX12387.1| porphobilinogen deaminase [Nitrosopumilus maritimus SCM1] Length = 311 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 107/304 (35%), Positives = 161/304 (52%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 + +G R S L++A + L H P I ++TKGD + R L I KG+F Sbjct: 2 KYIVGARGSQLSVAQTNLVIAELKKAH--PDTEYEIKTITTKGDTDS-RPLFTIDQKGIF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EI++ + E+D AVHS KD+P++L L ++ RE + DVFIS +L + Sbjct: 59 EKEIDRAVAQKEVDFAVHSLKDVPSELDDNLVLACIPKRETVNDVFISPDGSTLDSIKPG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SVIGTSSLRR + R R D++V RG IETR+ K + AI+LA AGI RL V Sbjct: 119 SVIGTSSLRRAVQVSRKRPDVTVKPIRGNIETRIKKASGENYDAIVLAKAGISRLGV-DV 177 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 L+ +DF PSPGQGAI I ++ K E++K I D+ + ERA +D C Sbjct: 178 KYTELSTDDFSPSPGQGAIAIVARADDSKTIEMLKKIEDPDSRLEIEAERALSDFVDSGC 237 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + + +A GS + + DGK F VS+ G++ + ++G+ A + +R ++ Sbjct: 238 RFPVGAYAKSNGSEMTLTVTAFSVDGKQFLHVSKTGDKNNPKSLGQSAGEELREKGVNDL 297 Query: 305 -FNF 307 N+ Sbjct: 298 ALNW 301 >gi|91205161|ref|YP_537516.1| porphobilinogen deaminase [Rickettsia bellii RML369-C] gi|157827501|ref|YP_001496565.1| porphobilinogen deaminase [Rickettsia bellii OSU 85-389] gi|122990935|sp|Q1RJN7|HEM3_RICBR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166217782|sp|A8GXC8|HEM3_RICB8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|91068705|gb|ABE04427.1| Porphobilinogen deaminase [Rickettsia bellii RML369-C] gi|157802805|gb|ABV79528.1| porphobilinogen deaminase [Rickettsia bellii OSU 85-389] Length = 300 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 109/294 (37%), Positives = 161/294 (54%), Gaps = 4/294 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL + P N I+ ++T GD I N+ L +IGGK LF Sbjct: 5 IRIGTRKSKLALTQTNLVIEQIKQ--HFPNINCEIVEITTSGDLIQNKPLYDIGGKALFL 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L++ ++D AVHS KD+P + K L I A L RED RDVF+ T +S+++L ++ Sbjct: 63 KEIEQALLNKKVDLAVHSLKDVPGIIPKDLSIEAVLEREDSRDVFVCLTHKSIEELPKNA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 VIGTSS+RRK + R R D+ +I FRG +++R+NKL N + A +LAYAG+KRL Sbjct: 123 VIGTSSVRRKLCVQRMRPDLEIIVFRGNVDSRINKLINKEVDATILAYAGLKRLNAFNPE 182 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ P GQG I IE ++ E+ K INH T++ + ERA L LD +C Sbjct: 183 YCHLIEHSQMLPCIGQGVIAIEIRKDDHDMIEICKQINHLPTFELIKPERALLEYLDANC 242 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 ++ I ++ Y + ++ DG + N + G AA+ + Sbjct: 243 RTPIGAYSKYLDNGDIQTDFMLGNLDGSKIAFHTEISNPKTSKESGIKAAKVML 296 >gi|331084091|ref|ZP_08333198.1| porphobilinogen deaminase [Lachnospiraceae bacterium 6_1_63FAA] gi|330402453|gb|EGG82023.1| porphobilinogen deaminase [Lachnospiraceae bacterium 6_1_63FAA] Length = 296 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 91/297 (30%), Positives = 148/297 (49%), Gaps = 6/297 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + IG+R S LA+ + R + + + I+ + T GD+I +RTL +IGGKGL Sbjct: 2 RKVVIGSRESKLAVVQSEMVRDYIRE--NNADIQVEILTMKTTGDKILDRTLDKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E++K L+ + + +VHS KDMP ++ + L + A+ RED RDV + + L Sbjct: 60 FVKELDKALMERKTELSVHSLKDMPMEVPEELPLIAFSKREDPRDVLVLPKGVT--QLDT 117 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 IG SSLRR L D+ RG ++TRL KL++ + +LLA AG+KRL E Sbjct: 118 SKPIGCSSLRRILQLKEIFPDMECKSVRGNVQTRLKKLDDGEYSGLLLAAAGLKRLGLED 177 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I E+ P+ GQG + I+ + +K E+ + ERAF+ L+G Sbjct: 178 RIARYFEPEEMIPAAGQGILAIQGRKDVDY--SYLKGYGDENATYAALAERAFVRYLNGG 235 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C S +A A + + G+ + + + + G+ A +G A+ ++ S Sbjct: 236 CSSPVAAHARVEDGQIILRGLYYDENTGNYEKGLKKGSAEAAEELGISLAKELQERS 292 >gi|307728969|ref|YP_003906193.1| porphobilinogen deaminase [Burkholderia sp. CCGE1003] gi|307583504|gb|ADN56902.1| porphobilinogen deaminase [Burkholderia sp. CCGE1003] Length = 307 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 99/292 (33%), Positives = 155/292 (53%), Gaps = 5/292 (1%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + A + +L ++ P + I+ ++T+GD+I +RTL+++GGKGLF +E+E L G Sbjct: 1 MWQAEHVQCALHKLY--PSCEVKILGMTTRGDQILDRTLSKVGGKGLFVKELEAALADGR 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 D AVHS KD+P +L G +S + RED RD +S+ SL L +V+GTSSLRR+A Sbjct: 59 ADLAVHSLKDVPMELPPGFALSTIMEREDPRDALVSNHYDSLAALPAGAVVGTSSLRREA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 +L + V RG ++TRL KL+ AI+LA AG+KRL I+ +L+ +D P Sbjct: 119 MLRMRYPHLEVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLGDRIRALLDPQDSLP 178 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + GQGA+ IE + + ++HE T +V ER L GSC+ +A +A Sbjct: 179 AAGQGALGIEIRADRADLAAWLTPLHHEHTAAAVEAERMVSRALGGSCEVPLAAYAEWHD 238 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISNKNVF 305 L+ G+V DG+ + A+ +GR+ A + + Sbjct: 239 GALHLRGVVATPDGRRVLSAQASAPAPTVERAVALGREVANALEQQGAMEIV 290 >gi|86133880|ref|ZP_01052462.1| Porphobilinogen deaminase [Polaribacter sp. MED152] gi|85820743|gb|EAQ41890.1| Porphobilinogen deaminase [Polaribacter sp. MED152] Length = 530 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 98/306 (32%), Positives = 152/306 (49%), Gaps = 10/306 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K RIGTR S LAL A + R L ++ + I+P+ + GD I ++ L E+G G Sbjct: 2 QKTIRIGTRESQLALWQANKVRKQLEEL----GYETEIVPIKSTGDIILDKPLYELGITG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT+ ++ L++ +ID AVHS KD+PT L +G+ A L R + D+ + + Sbjct: 58 IFTKNLDIALLNEDIDIAVHSLKDVPTALPEGIMQGAVLKRANYSDLLVLKDTEEFFGQP 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKRLKK 181 +I T SLRRKA+ L V D RG + TRL+KL N++ + + A AG++RL Sbjct: 118 -GGIIATGSLRRKAMWLNRYPTHKVEDLRGNVNTRLSKLENSETWNGAIFAAAGLERLGL 176 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 K + + P+P QGAI + + + + +NH +T V ER FL L+ Sbjct: 177 --REKGAIPLTWMIPAPAQGAIMLACLEKDQFVIDACEQLNHYETKVCVGIEREFLRLLE 234 Query: 242 GSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G C + I AY T + F GI+L DG V++ + +D A Y+ Sbjct: 235 GGCTAPIGALAYVDEKTQEINFKGILLKRDGSKKITVTKTAKLGSHRYLAKDCADYVINR 294 Query: 300 SNKNVF 305 K + Sbjct: 295 GGKELI 300 >gi|310658305|ref|YP_003936026.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Clostridium sticklandii DSM 519] gi|308825083|emb|CBH21121.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Clostridium sticklandii] Length = 304 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 90/295 (30%), Positives = 144/295 (48%), Gaps = 4/295 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +G+R S LAL + L ++ P + I + TKGD+I + L ++ KG+F Sbjct: 2 KIIVGSRGSQLALTQTKLIVNELSKLN--PNVDFEIKVIKTKGDKIQDIPLDKMNDKGIF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA-- 122 +EIE++LIS EID AVHS KDMPTK+ + L RED RD I L+DL+ Sbjct: 60 VKEIEEQLISYEIDMAVHSMKDMPTKMDERLVFPVIPKREDSRDALILKNNLKLEDLSML 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +IGT S RR RG I+TR+NKL+ I+LA +G+KR+ +E Sbjct: 120 ETMIIGTGSKRRSYQFKASYPKAEFEPIRGNIDTRINKLHTQNLDGIILAASGLKRISRE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + + P+P QG + ++T N+ + ++ + + ERA+L E++G Sbjct: 180 NEISHYFDEKTMIPAPCQGILALQTRTNDYQVIAVLSKVEDRCSRIQYIAERAYLEEIEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C + + + G + Y + G + G +A +GR A+ ++ Sbjct: 240 GCHAPVGAYCEINGDKITIYAVYGDEQGNKLIRDNITGATDNADELGRTLAKKMK 294 >gi|70999177|ref|XP_754310.1| porphobilinogen deaminase Hem3 [Aspergillus fumigatus Af293] gi|66851947|gb|EAL92272.1| porphobilinogen deaminase Hem3, putative [Aspergillus fumigatus Af293] gi|159127327|gb|EDP52442.1| porphobilinogen deaminase Hem3, putative [Aspergillus fumigatus A1163] Length = 362 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 97/312 (31%), Positives = 146/312 (46%), Gaps = 13/312 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA+ R L + P I L T GDR L + G K L+ Sbjct: 42 PLRIGTRRSNLAMVQTEGIRDRLQKIG--PDRTYEIEALRTAGDRDQLTALYDFGAKSLW 99 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T E+E+KL SGE+D VH KDMPT L +++A PR+D RD I SLK L Sbjct: 100 TTELEEKLTSGELDVIVHCLKDMPTTLPDTCELAAIPPRDDPRDALIIKAGLPYTSLKSL 159 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIKRL 179 +V+GTSS+RR A L R + + RG +ETRL K+++ ++ ++++ AG++R+ Sbjct: 160 PEGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPHSEYMCMVMSAAGLERV 219 Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + I + L D + GQGA+ +E + K QEL+ + + + ER+ + Sbjct: 220 GLKHRISQYLGSRDGGILYAVGQGALGLEIRKGDRKMQELLGQLADRKSTLACLAERSLM 279 Query: 238 AELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAA 293 L+G C I L IV++ DG E +A +G + A Sbjct: 280 RTLEGGCSVPIGVETEWMSSGDLRMDAIVVSLDGTRSVEDRITARVEAIDEADALGEELA 339 Query: 294 QYIRFISNKNVF 305 + + Sbjct: 340 GRLLEAGAGEIL 351 >gi|326804046|ref|YP_004321864.1| hydroxymethylbilane synthase [Aerococcus urinae ACS-120-V-Col10a] gi|326650262|gb|AEA00445.1| hydroxymethylbilane synthase [Aerococcus urinae ACS-120-V-Col10a] Length = 332 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 91/326 (27%), Positives = 156/326 (47%), Gaps = 26/326 (7%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +RIGTR S LA+ + E +L V+ P ++ LSTKGD+ + L++IGGKG+F Sbjct: 3 TYRIGTRSSRLAMQQSLEVVRALEAVY--PQDEFQLVKLSTKGDKDKSSPLSKIGGKGVF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 IE+ L G++D VHS KD+P++L +G ++A R+D DV ++ DL Sbjct: 61 VRWIEQALAQGKVDFIVHSLKDVPSELAQGTVLAAIPKRQDPGDVILTAKGMDWHDLPNG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183 + +GT SLRR A L R D+ ++ RG I++RL+KL A++LA AG+KRL+ Sbjct: 121 ARVGTGSLRRLAQLHALRPDLEIVHVRGNIDSRLDKLARGDFQALVLATAGLKRLQLLDY 180 Query: 184 -----------------------VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220 + ++++ P+ GQGA+ ++ ++ + +E+++ Sbjct: 181 PFDSQRFNQKEVNSEAHILNNYELQAHAFSLDEMIPAVGQGALAVQCLNDDQQTREVLQA 240 Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG 280 ++ +T +V CER L L C + + KG + ++ DG Sbjct: 241 VDDPETHQAVACERVVLKALGADCNYPVGAYGQIKGQEINLTAMIGRQDGFALVRSQLEA 300 Query: 281 NRCDAINIGRDAAQYIRFISNKNVFN 306 A+ +G+ Q + Sbjct: 301 PLDQALALGQAVYQDLLDQGAGKWLG 326 >gi|167042167|gb|ABZ06900.1| putative porphobilinogen deaminase, dipyromethane cofactor-binding domain protein [uncultured marine crenarchaeote HF4000_ANIW93H17] Length = 311 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 106/300 (35%), Positives = 158/300 (52%), Gaps = 4/300 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 F +GTR S L+LA S L K P I ++TKGD T R L I KG+F Sbjct: 2 TFLVGTRGSNLSLAQTNWVISELQK--KNPSSEFEIKTITTKGDTDT-RALFTIDQKGIF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EI+K + +ID AVHS KD+P+ + K L I+ RE DV I+ +LK + L Sbjct: 59 EKEIDKAVAEKQIDFAVHSLKDVPSDISKSLTIACVPKRESANDVLITKDGSNLKTIQLS 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR + R R D+ V RG IETR+NK+ + K AI+LA AGI RL V Sbjct: 119 AVVGTSSLRRAVQVSRIRPDVVVKPVRGNIETRINKVIDGKFDAIILAEAGISRLGL-DV 177 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 +L+ +DFPPSPGQGA+ I ++ K ++K I + + + ERA ++ C Sbjct: 178 KHSVLSTKDFPPSPGQGALAIVCRADDDKTISMLKKIEDKKSRIEIEAERALSDYVESGC 237 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + + A L + DGKI ++ + G+ + N+G++ + ++ + Sbjct: 238 RFPVGALAIANSGMLKLTVSAYSVDGKISIKLEKTGDVDNPKNLGQELGKELKKSGIAEI 297 >gi|298207313|ref|YP_003715492.1| porphobilinogen deaminase [Croceibacter atlanticus HTCC2559] gi|83849949|gb|EAP87817.1| porphobilinogen deaminase [Croceibacter atlanticus HTCC2559] Length = 305 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 96/304 (31%), Positives = 157/304 (51%), Gaps = 10/304 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A ++ L ++ + V++P+ + GD I ++ L E+G Sbjct: 1 MS-KVIRIGTRDSELALWQANTVKAQLENL----GYKTVLVPVKSTGDLILDQPLYELGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ +++G++D AVHS KD+PT L KG+ A L R +D+ + + L Sbjct: 56 TGIFTKTLDVAMVNGDVDIAVHSMKDVPTALPKGIMQGAVLKRAATKDILV---HKGLDF 112 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L I T SLRRKA L + V+D RG + TRL KL +N + + A AG+ R+ Sbjct: 113 LEAEGTIATGSLRRKAQWLNKYPNHKVVDLRGNVNTRLQKLEDNSWNGAIFAKAGLTRIN 172 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + + ++ P+P QGA+ I + +E V +N + ER FL L Sbjct: 173 V--LPEHFIELDWMLPAPAQGAMVIAVMEQDVFCKEAVSKLNDHFSEICTTIEREFLKTL 230 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C + I A + ++F G + + DGK E+ + + + N+GR+ A I Sbjct: 231 EGGCTAPIGALAVIEDKDIWFRGCLFSLDGKQKLEIEKRVSLKENRNLGRNCAIEILDQG 290 Query: 301 NKNV 304 K++ Sbjct: 291 GKDL 294 >gi|195440018|ref|XP_002067856.1| GK12668 [Drosophila willistoni] gi|194163941|gb|EDW78842.1| GK12668 [Drosophila willistoni] Length = 629 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 101/297 (34%), Positives = 147/297 (49%), Gaps = 16/297 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K Sbjct: 4 QDKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNISLPKIGEK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + S+ Sbjct: 62 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHSI 121 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 L SVIGTSSLRR A + R + V D RG + TRL KL+ ++K I+LA AG+ Sbjct: 122 ATLPKGSVIGTSSLRRTAQIRRQYPHLVVCDIRGNLNTRLAKLDAADSKFAGIILAQAGL 181 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ I ++L D + GQGA+ +E N+ ++++ + +T + ER+F Sbjct: 182 VRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDGPVLDMLQKLLCLNTTCRILAERSF 241 Query: 237 LAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCD 284 L L G C + +A ++ KG L G V + DG I + Sbjct: 242 LKTLGGGCSAPVAVWSNLKGEPMTANSQDVGLSLTGAVWSLDGAIEIREHLACALSE 298 >gi|311745811|ref|ZP_07719596.1| hydroxymethylbilane synthase [Algoriphagus sp. PR1] gi|126576013|gb|EAZ80291.1| hydroxymethylbilane synthase [Algoriphagus sp. PR1] Length = 312 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 100/307 (32%), Positives = 166/307 (54%), Gaps = 7/307 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +IGTR S LAL A+ L+ I+ + TKGD+I + ++ +IG KG Sbjct: 2 SKLIKIGTRGSKLALWQAYYVEELLVKA----GLKAEIVIIDTKGDQILDVSIAKIGSKG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKDL 121 +FT+E+E +L+ G ID AVHSAKDM + L +G +I A+ RE DV SH L Sbjct: 58 VFTQELEDQLLDGRIDIAVHSAKDMQSNLPEGFEIIAFTERETENDVLASHKKDIDLSGA 117 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSS RR A L + + ++ RG ++TR+ K+ A+LLAYAG+ R+ Sbjct: 118 SKPLTLGTSSTRRVATLKHFYPHVKTVEVRGNLQTRIRKMEEGLCDALLLAYAGVHRMGY 177 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQ-ELVKVINHEDTWDSVNCERAFLAE 239 +++I + L++ +F P+ GQG++ IE +P+ + +++ NH +T + ERA+L Sbjct: 178 DEMIAQKLDLNEFTPAVGQGSVAIEVAEKLDPEVKKQIIDACNHTETSLKLRAERAYLRV 237 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C + A +G + G +++ DG + +G+ D IG+ A+ + Sbjct: 238 LEGGCSIPVFALATMEGEEIKLKGGIVSLDGSERISLLVSGSASDPEKIGKQLAKEVFAA 297 Query: 300 SNKNVFN 306 K + + Sbjct: 298 GGKVILD 304 >gi|15604330|ref|NP_220846.1| porphobilinogen deaminase [Rickettsia prowazekii str. Madrid E] gi|11386862|sp|Q9ZD77|HEM3_RICPR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|3861022|emb|CAA14922.1| PORPHOBILINOGEN DEAMINASE (hemC) [Rickettsia prowazekii] gi|292572083|gb|ADE29998.1| Porphobilinogen deaminase [Rickettsia prowazekii Rp22] Length = 299 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 104/296 (35%), Positives = 158/296 (53%), Gaps = 4/296 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL + + P N I+P+ T GD I N+ L +IGGK LF Sbjct: 5 IRIGTRNSTLALIQTNLVIEQIKQI--FPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ +ID AVHS KD+P K+ L I+A L RED RDV + QS++ L ++ Sbjct: 63 KEIEQALLDKKIDLAVHSLKDIPGKIPVELVIAAVLEREDPRDVLVCLNYQSIETLPQNA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 VIG+S++RRKA + + R D+++ FRG +++R+ KL + AI+L+YAG+KRL + Sbjct: 123 VIGSSAVRRKAFIKKIRPDLNIKVFRGNVDSRIKKLMTGEVDAIILSYAGLKRLNVFNQK 182 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ P GQG I +E ++ + INH T++ + ERAFL LD +C Sbjct: 183 YCHLIEYSKMLPCIGQGVIAVEIRKDDNAMFNICSQINHLPTFELIKPERAFLEYLDANC 242 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + IA +A Y + ++ D + N + G AA+ + Sbjct: 243 STPIAAYAQYLDAYNIQIDFMLGNLDCTKIIFQTEITNIKTSKICGIKAAKMMLAQ 298 >gi|194748513|ref|XP_001956689.1| GF24457 [Drosophila ananassae] gi|190623971|gb|EDV39495.1| GF24457 [Drosophila ananassae] Length = 648 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 146/288 (50%), Gaps = 16/288 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K Sbjct: 4 QEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKIGEK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + ++ Sbjct: 62 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHTI 121 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 L SVIGTSSLRR A + R + V D RG + TRL KL+ ++K I+LA AG+ Sbjct: 122 ASLPNGSVIGTSSLRRTAQIRRQYPHLVVCDIRGNLNTRLAKLDAADSKFAGIILAQAGL 181 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ I ++L D + GQGA+ +E N+ +++ + +T + ER+F Sbjct: 182 VRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDEPVLAMLQKLMCLNTTCRILAERSF 241 Query: 237 LAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHE 275 L L G C + +A ++ KG L G V + DG I Sbjct: 242 LKTLGGGCSAPVAVWSNLKGEPLNGNTQEVGLSLTGAVWSLDGAIEIR 289 >gi|302410259|ref|XP_003002963.1| porphobilinogen deaminase [Verticillium albo-atrum VaMs.102] gi|261357987|gb|EEY20415.1| porphobilinogen deaminase [Verticillium albo-atrum VaMs.102] Length = 353 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 102/316 (32%), Positives = 146/316 (46%), Gaps = 16/316 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA+ +L + P + I + T GD+ L GGKGL+ Sbjct: 20 TVRIGTRRSALAVRQTELVIEALKRIR--PDYTYEIHAMQTLGDKDQVTALYNFGGKGLW 77 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-----AQSLK 119 T E+E KL + EID VHS KDMPT L +G + A + RE+ DV + +S+ Sbjct: 78 TNELEAKLTNNEIDVIVHSLKDMPTVLPEGCILGAVVERENPHDVVVFKDTVADQYKSIA 137 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIK 177 DL SV+GTSS+RR A L R + D RG I+TRL KL + AI+LA AG+ Sbjct: 138 DLPAGSVVGTSSIRRIAQLKRKYPGLQFADVRGNIQTRLAKLDNPDGPFTAIILAAAGLL 197 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R+ I + L + + GQGA+ IE ++ + L++ I H T + ER+ Sbjct: 198 RMDLGGRIGQYLASDTGGILHAVGQGALGIEARTDDDRVLTLLRGIEHGPTRLAAEAERS 257 Query: 236 FLAELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGR 290 + L+G C I G TL V DG + + A +GR Sbjct: 258 VMRTLEGGCSVPIGVETTWRDDGKTLTLKASVTHVDGTHGVDGESTRVIESPEAADQLGR 317 Query: 291 DAAQYIRFISNKNVFN 306 D A + + + + Sbjct: 318 DLAAELVGRGAQTILD 333 >gi|67459209|ref|YP_246833.1| porphobilinogen deaminase [Rickettsia felis URRWXCal2] gi|75536359|sp|Q4ULA5|HEM3_RICFE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|67004742|gb|AAY61668.1| Porphobilinogen deaminase [Rickettsia felis URRWXCal2] Length = 301 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 107/299 (35%), Positives = 163/299 (54%), Gaps = 4/299 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLAL + P N I+P+ T GD I N+ L +IGGK LF Sbjct: 5 IRIGTRKSPLALIQTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++ Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEELVIAAILEREDPRDVFVCLNYKSIEELPQNA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL-KKEKV 184 VIG+S++RRKA + + RSD+ V FRG I++R+ KL + A +LAYAG+KRL Sbjct: 123 VIGSSAVRRKAFIQKIRSDLKVTVFRGNIDSRIKKLMTAEVDATILAYAGLKRLRAFNPE 182 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ P GQG I +E ++ E+ INH T++ + ERAFL LD +C Sbjct: 183 YCHLIEYSQMLPCIGQGVIAVEIRQDDNAMLEICNQINHLPTFELIKPERAFLEYLDANC 242 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 ++ IA ++ Y + ++ D + + + G AA+ + +K Sbjct: 243 RTPIAAYSKYLDADNIQTDFMLGNLDCSKIIFHTEVTDINTSKEAGIKAAKMMLNQLDK 301 >gi|6319996|ref|NP_010076.1| Hem3p [Saccharomyces cerevisiae S288c] gi|122846|sp|P28789|HEM3_YEAST RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|3771|emb|CAA77804.1| porphobilinogen deaminase [Saccharomyces cerevisiae] gi|1429351|emb|CAA67486.1| hydroxymethylbilane synthase [Saccharomyces cerevisiae] gi|1431340|emb|CAA98783.1| HEM3 [Saccharomyces cerevisiae] gi|190405197|gb|EDV08464.1| phorphobilinogen deaminase [Saccharomyces cerevisiae RM11-1a] gi|256270069|gb|EEU05314.1| Hem3p [Saccharomyces cerevisiae JAY291] gi|259145042|emb|CAY78306.1| Hem3p [Saccharomyces cerevisiae EC1118] gi|285810835|tpg|DAA11659.1| TPA: Hem3p [Saccharomyces cerevisiae S288c] gi|323309897|gb|EGA63098.1| Hem3p [Saccharomyces cerevisiae FostersO] gi|323349387|gb|EGA83611.1| Hem3p [Saccharomyces cerevisiae Lalvin QA23] Length = 327 Score = 315 bits (809), Expect = 4e-84, Method: Composition-based stats. Identities = 93/321 (28%), Positives = 146/321 (45%), Gaps = 17/321 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + IG R S LA+ + + + K P ++ + L T GD+I + L GG Sbjct: 1 MGPETLHIGGRKSKLAVIQSNHVLKLIEE--KYPDYDCKVFTLQTLGDQIQFKPLYSFGG 58 Query: 61 KGLFTEEIEKKLI----SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH--- 113 K L+T+E+E L S ++D VHS KDMPT L +G ++ R D D + Sbjct: 59 KALWTKELEDHLYHDDPSKKLDLIVHSLKDMPTLLPEGFELGGITKRVDPTDCLVMPFYS 118 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILL 171 +SL DL ++GTSS+RR A L R + RG I+TRL KL++ K I+L Sbjct: 119 AYKSLDDLPDGGIVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIIL 178 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ R+ E I + + + + GQGA+ IE + K +++ I + Sbjct: 179 ASAGLMRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCL 238 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVS----RNGNRCDA 285 ERA + L+G C I + T L IV+ +G E + D+ Sbjct: 239 SERALMRTLEGGCSVPIGVESKYNEETKKLLLKAIVVDVEGTEAVEDEIEMLIENVKEDS 298 Query: 286 INIGRDAAQYIRFISNKNVFN 306 + G+ A+ + K + + Sbjct: 299 MACGKILAERMIADGAKKILD 319 >gi|182677009|ref|YP_001831155.1| porphobilinogen deaminase [Beijerinckia indica subsp. indica ATCC 9039] gi|182632892|gb|ACB93666.1| porphobilinogen deaminase [Beijerinckia indica subsp. indica ATCC 9039] Length = 337 Score = 315 bits (809), Expect = 4e-84, Method: Composition-based stats. Identities = 132/306 (43%), Positives = 171/306 (55%), Gaps = 5/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR SPLALA A E L H + I + T GD I +R L+ GGKGLFT Sbjct: 19 LRLGTRGSPLALAQAHELADRLARAHGFAKEAVAITIIRTSGDMIQDRPLSLAGGKGLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+++ LI G +D AVHSAKD+PT L + L I+ YLPRED+RDV+IS A +DL S Sbjct: 79 KELDQALIEGMVDLAVHSAKDLPTILPEDLIIAGYLPREDVRDVWISPKAGHPRDLPPGS 138 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GT+SLRR ALL R R D+ V RG +ETRL KL + A LLA AG++RL Sbjct: 139 VVGTASLRRGALLKRLRPDLEVRLLRGNVETRLAKLAAGEVDATLLALAGLRRLGLADKA 198 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++L IEDF P+ GQGAI I T ++ L+ I T ++ ER FL LDGSCK Sbjct: 199 TQVLAIEDFLPAAGQGAIGITTRRDDAATLALLAPILDPATHVALAAERGFLTVLDGSCK 258 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-----AINIGRDAAQYIRFIS 300 + I A + + GIVL DG + E +G A +G AA+ I Sbjct: 259 TPIGAHATVEHDQVTLRGIVLRPDGSEWFEACESGPLESGSLEAARELGETAARAILARL 318 Query: 301 NKNVFN 306 + F Sbjct: 319 PEGFFQ 324 >gi|115387533|ref|XP_001211272.1| porphobilinogen deaminase [Aspergillus terreus NIH2624] gi|114195356|gb|EAU37056.1| porphobilinogen deaminase [Aspergillus terreus NIH2624] Length = 342 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 106/319 (33%), Positives = 156/319 (48%), Gaps = 17/319 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K F IGTR S LAL +++L P ++ I T GD+ T L + K Sbjct: 17 KTTFTIGTRKSKLALLQTDLVQAALQKA--WPQYSFRIHSRETAGDQNTTIALRDFTTKN 74 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119 L+T+E+E LI+G++D VHS KD+PT L + L RED RDV + +SL Sbjct: 75 LWTQELEDLLIAGDVDLIVHSLKDVPTLLPPSCTLGPMLKREDTRDVLVVKKGLSYKSLD 134 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177 DL SV+GTSS+RR A L R + +ID RG I TRL KL+ + I+LA AG+ Sbjct: 135 DLPAGSVVGTSSIRRTAQLARRYPHLKIIDVRGNIGTRLAKLDAEDGPFTCIILAAAGLL 194 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 RL + I + L+ ++ + GQGA+ IE ++P E++K I ++T + ER+ Sbjct: 195 RLGLQDRITQYLDSKNGGMLYAVGQGALGIEIRKDDPLMHEMLKNIGDDETTFASLAERS 254 Query: 236 FLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGN---RCDAIN 287 L L+G C + + + S L IV++ DGK EV +G+ A Sbjct: 255 LLRTLEGGCSAPLGVESEWIPSSGSSRKLRMRSIVVSVDGKESAEVEVDGDVDSVDSAEA 314 Query: 288 IGRDAAQYIRFISNKNVFN 306 G A + + Sbjct: 315 FGIKVANALVEKGAGKILE 333 >gi|215434281|gb|ACJ66828.1| porphobilinogen deaminase [uncultured bacterium pSY1435] Length = 310 Score = 315 bits (808), Expect = 5e-84, Method: Composition-based stats. Identities = 105/300 (35%), Positives = 153/300 (51%), Gaps = 1/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LAL A R L+ + ++ ++T+GDRI +R L E+GGKGLF Sbjct: 7 LRLGTRASALALWQARHVRDRLLARWGA-AIEVELVEITTEGDRIIDRPLNEVGGKGLFV 65 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 IE +L+ ID AVHS KD+P GL I R D RDV + +L L + Sbjct: 66 TGIEDRLLDRSIDFAVHSMKDLPGHTPDGLAIVCTPERADARDVLVGRAGSTLVRLPAGT 125 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR AL R I VI RG + TR+ K+ + +LLA AG++RL+ + + Sbjct: 126 RVGTSSLRRAALARRINPGIEVIAIRGNVPTRIAKIADGVCDVVLLAAAGLERLELAQHV 185 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ E F P+ QG + IE ++ + EL+ + H DT ER FLA L+G C+ Sbjct: 186 AEYLDPESFCPAACQGILAIEARADDRRVHELLAPLEHADTATLAAAERGFLARLEGGCQ 245 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A A L+ G+V+ G+ + G A +GR A+ + + + Sbjct: 246 VPMACHARLDAGVLHVRGLVVGIGGEPLFDAREQGEPSAAAQLGRTVAEQLLVLGAAEIL 305 >gi|121605981|ref|YP_983310.1| porphobilinogen deaminase [Polaromonas naphthalenivorans CJ2] gi|120594950|gb|ABM38389.1| porphobilinogen deaminase [Polaromonas naphthalenivorans CJ2] Length = 331 Score = 315 bits (808), Expect = 5e-84, Method: Composition-based stats. Identities = 99/313 (31%), Positives = 149/313 (47%), Gaps = 19/313 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LA+ A ++ L + ++ ++T GD+I +R+L+++GGKGLF Sbjct: 13 KVVIATRESRLAMWQAEHVKALLESRLGW---QVELLGMTTLGDQILDRSLSKVGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++ L RED D F+S+ SL +L Sbjct: 70 VKELEVALSEGRADLAVHSLKDVPMDLPEGFALACVLEREDPHDAFVSNDFASLAELPPG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR LL R D+++ RG ++TRL KL+ + AI+LA AG+KRL E Sbjct: 130 AVVGTSSLRRLVLLKALRPDLAIQPLRGNLDTRLRKLDEGQYQAIVLAAAGLKRLGLESR 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ D P+ GQGA+ IE + + + H+ TW +V ER + GSC Sbjct: 190 IRHTFAPTDMLPAAGQGALGIEVRADRADLIAALATLAHQPTWLAVTAERTVSRAMGGSC 249 Query: 245 KSAIAGFAYC-KGSTLYFYGIVLAS---DGK------------IFHEVSRNGNRCDAINI 288 +A F L D + + + +A + Sbjct: 250 SMPLAAFVTAGSDGALQLDAAWGDPATADASSGVSAVLPAPLVQVRQTAVVRSFAEAEAL 309 Query: 289 GRDAAQYIRFISN 301 G A +R Sbjct: 310 GDAVAAQLRAGGA 322 >gi|257470630|ref|ZP_05634720.1| porphobilinogen deaminase [Fusobacterium ulcerans ATCC 49185] Length = 306 Score = 315 bits (808), Expect = 5e-84, Method: Composition-based stats. Identities = 106/301 (35%), Positives = 152/301 (50%), Gaps = 16/301 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT-------NRTLTEI 58 IG+R S LA+A + + L + P I + T GD +++L Sbjct: 12 IVIGSRGSILAMAQSEMIKKMLE--NNFPELEFEIKKIVTSGDTDLVSNWNNSDKSL--- 66 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 K FT+EIE +L++G ID AVHS KDMP +GL A RED RDV +S + ++L Sbjct: 67 --KSFFTKEIEVELLNGTIDLAVHSMKDMPVVSPEGLICGAVPDREDSRDVLVSKSGKTL 124 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L +++GTSSLRR L RSD+ + RG I TRLNKL N AILLA AG+KR Sbjct: 125 MELPAGAIVGTSSLRRTMNLKNLRSDLEIKQLRGNIHTRLNKLKNEDYDAILLAAAGLKR 184 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + EK I E L+ E F P+P QG + I+ N+ + ++++K I++ED V ER F Sbjct: 185 VGLEKEITEYLDPEKFLPAPAQGVLHIQCRENDDEVKKILKSIHNEDIEKVVVIEREFSK 244 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 DG C + + G + GI G+ + S + I + A I+ Sbjct: 245 IFDGGCHTPMGCHCILDGDKITLTGIYFK--GENGYSASITEDAALGIKTAQKLADIIKE 302 Query: 299 I 299 Sbjct: 303 K 303 >gi|225630165|ref|YP_002726956.1| porphobilinogen deaminase [Wolbachia sp. wRi] gi|254800263|sp|C0R2M3|HEM3_WOLWR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|225592146|gb|ACN95165.1| porphobilinogen deaminase [Wolbachia sp. wRi] Length = 292 Score = 315 bits (808), Expect = 6e-84, Method: Composition-based stats. Identities = 112/295 (37%), Positives = 162/295 (54%), Gaps = 8/295 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LA+ A E + L+D P +I I+ + T GD+ N L EIGGKGLF Sbjct: 3 VKIGTRGSKLAVVQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFI 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE +L+ ID AVHS KD+P GL I L R D FISH SL+ L + Sbjct: 61 KEIEAELLENNIDMAVHSLKDVPAFFSWGLTIPCVLERLSPCDAFISHKHNSLESLPQQA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 I TS++RRK LL +R D++++ RG + TR L N I+LA AG+ RL+K +I Sbjct: 121 TIATSAIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLI 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L + + GQGAICI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC Sbjct: 178 TEVLPPKVMLSAVGQGAICIQCRRNDVKIIDLLEKINNNMSFIGVKSERSFMKTVNGSCF 237 Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + +A A + LY ++ DGK + R DA +G DA ++ Sbjct: 238 TPLAALAEYVSENMLYLRCMLA--DGKNIYFTERTSFIEDAEKMGMDAGLELKSK 290 >gi|170691941|ref|ZP_02883105.1| porphobilinogen deaminase [Burkholderia graminis C4D1M] gi|170143225|gb|EDT11389.1| porphobilinogen deaminase [Burkholderia graminis C4D1M] Length = 318 Score = 315 bits (808), Expect = 6e-84, Method: Composition-based stats. Identities = 104/292 (35%), Positives = 159/292 (54%), Gaps = 5/292 (1%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E+E L G Sbjct: 1 MWQAEHVRCALHKLY--PSCDVKILGMTTRGDQILDRTLSKVGGKGLFVKELEAALADGR 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 D AVHS KD+P +L G +S + RED RD +S+ SL L +V+GTSSLRR+A Sbjct: 59 ADLAVHSLKDVPMELPAGFALSTIMEREDPRDALVSNDYDSLAALPAGAVVGTSSLRREA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 +L + V RG ++TRL KL+ AI+LA AG+KRL E I+ +L+ ED P Sbjct: 119 MLRMRYPHLEVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEGRIRALLDPEDSLP 178 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + GQGA+ IE + + + ++HE T +V ER L GSC+ +A +A Sbjct: 179 AAGQGALGIEIRSDRAELAAWLAPLHHEHTAAAVEAERMVSRVLGGSCEVPLAAYATWHD 238 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISNKNVF 305 L+ GIV DG+ + AI +GR+ A + ++ Sbjct: 239 GALHLRGIVATPDGQRVLSAQASAPAPTTERAIALGREVANALEQQGAMDIV 290 >gi|257465835|ref|ZP_05630146.1| porphobilinogen deaminase [Fusobacterium gonidiaformans ATCC 25563] gi|315916992|ref|ZP_07913232.1| porphobilinogen deaminase [Fusobacterium gonidiaformans ATCC 25563] gi|313690867|gb|EFS27702.1| porphobilinogen deaminase [Fusobacterium gonidiaformans ATCC 25563] Length = 299 Score = 315 bits (807), Expect = 6e-84, Method: Composition-based stats. Identities = 107/301 (35%), Positives = 164/301 (54%), Gaps = 6/301 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL--TEI 58 M K+ +G+R S LALA + L H P + I + T+GD+ + ++ Sbjct: 1 MSKQQIILGSRGSILALAQTNWVKEQLEKYH--PELSFSIQIIETQGDKDLHSHFGNSQS 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 K FT+EIEK L+ GEID AVHS KD+P+ GL A RED+RDV IS + + L Sbjct: 59 SLKSFFTKEIEKSLLEGEIDIAVHSMKDVPSVSPAGLICGAIPIREDVRDVLISRSGKPL 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L ++IGTSSLRR + + R D+ + RG I TRL KL + AI+LA AG+KR Sbjct: 119 AELPQGAIIGTSSLRRIQNIKKIRPDLEIKALRGNIHTRLRKLEEEQYDAIILAAAGLKR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 +K E+ I E L+ FPP+P QGA+ I+ + + Q++++ I++E+ + ER F Sbjct: 179 VKLEEKITEYLDPTIFPPAPAQGALYIQCREKDTEVQKILQSIHNENLEKVLVVEREFSK 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 DG C + + ++ +G TL F+ + + + ++ N +I R AAQ I Sbjct: 239 IFDGGCHTPMGCYSNLQGDTLEFFAMYSHENKR--YQTKVVENLSKGKDIARMAAQEIEK 296 Query: 299 I 299 + Sbjct: 297 M 297 >gi|317010518|gb|ADU84265.1| porphobilinogen deaminase [Helicobacter pylori SouthAfrica7] Length = 306 Score = 315 bits (807), Expect = 6e-84, Method: Composition-based stats. Identities = 93/303 (30%), Positives = 151/303 (49%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IG+R S LAL A + L I + T GD+I + L +IGGKGLF Sbjct: 3 KLVIGSRGSELALWQANYIKERLKKECF---IESEIQIVKTTGDKILDAPLNKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L Sbjct: 60 TKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITQRADVRDTFLSAQFPDLMSLPKG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183 + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG++RL + Sbjct: 120 AKVGTTSLRRSMQLKCKRKDLDTESLRGNVQTRLKKLECGEFDAIVLAEAGLRRLNIQGA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ ++E+ PS GQGA+ +E ++ ++ +N E + + ER F+ L+G Sbjct: 180 KYRKAFSVEEMIPSMGQGALGVEMLKSHKHFST-LQKLNDEKSAFCCHLEREFIKGLNGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ + A G + I+ +G+ + G++ A ++ ++ + + Sbjct: 239 CQIPVGVHASLMGEKVKIQAILGLPNGEEVITKEKQGDKNKAFDLVQELLEAFLQNGARE 298 Query: 304 VFN 306 + Sbjct: 299 ILE 301 >gi|254566627|ref|XP_002490424.1| Phorphobilinogen deaminase [Pichia pastoris GS115] gi|238030220|emb|CAY68143.1| Phorphobilinogen deaminase [Pichia pastoris GS115] Length = 344 Score = 315 bits (807), Expect = 6e-84, Method: Composition-based stats. Identities = 95/316 (30%), Positives = 148/316 (46%), Gaps = 17/316 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++G+R S LA+ A R + + + P ++ +ST GD++ N+ L GGK L+T Sbjct: 15 LKLGSRKSALAIIQAEIVRQLI--LKEYPELETKLVSVSTLGDQVQNKALFTFGGKSLWT 72 Query: 66 EEIEKKLIS-----GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117 +E+E L+ +ID VHS KDMPT L ++ + RED RD + +S Sbjct: 73 KELEMLLLESVGGFDQIDMIVHSLKDMPTHLPDEFELGCIIEREDPRDALVVQDGLSYKS 132 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAG 175 L DL +V+GTSS+RR A LL+ + RG ++TRL KL +++ +LLA AG Sbjct: 133 LADLPEGAVVGTSSVRRSAQLLKNFPHLKFKSVRGNLQTRLRKLDDPDSEYCCLLLAAAG 192 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + R + I LN + S GQGA+ +E + + + + I H T ERA Sbjct: 193 LIRTGLQHRISMYLNDDVMYHSVGQGALGVEIRKGDQFMKNICEKIGHRTTTLRCLAERA 252 Query: 236 FLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRN---GNRCDAINIGR 290 L L+G C I T L +V++ +G+ S A + G Sbjct: 253 LLRYLEGGCSVPIGVSTIYSEDTKELTMNSLVVSCNGRDSVTESMTEVVTTEEQAEDFGE 312 Query: 291 DAAQYIRFISNKNVFN 306 AQ + K + + Sbjct: 313 RLAQKLIDQGAKRILD 328 >gi|195127549|ref|XP_002008231.1| GI11928 [Drosophila mojavensis] gi|193919840|gb|EDW18707.1| GI11928 [Drosophila mojavensis] Length = 632 Score = 315 bits (807), Expect = 7e-84, Method: Composition-based stats. Identities = 99/311 (31%), Positives = 149/311 (47%), Gaps = 28/311 (9%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K Sbjct: 6 KEKVIRVGSRKSELALIQTKHVVGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKIGEK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 LFT ++E L +G +D VHS KD+PT L G+ + A L RED RD + ++ Sbjct: 64 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAVGAVLEREDARDALVLREHLKGHTI 123 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 L SVIGTSSLRR A + R + V D RG + TRL KL+ ++K I+LA AG+ Sbjct: 124 ASLPKGSVIGTSSLRRTAQIRRQYPHLIVCDIRGNLNTRLAKLDAKDSKFSGIILAQAGL 183 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ I ++L D + GQGA+ +E N+ +++ + +T + ER+F Sbjct: 184 VRMGWMNRISQVLEPTDLLYAVGQGALAVECRANDAHVLGMLQRLMCLNTTCRILAERSF 243 Query: 237 LAELDGSCKSAIAGFAYCKGS---------------------TLYFYGIVLASDGKIFHE 275 L L G C + +A ++ KG L G V + DG I Sbjct: 244 LKTLGGGCSAPVAVWSKLKGEPSNISNGNRQQQQQLKQDEEVGLSLTGAVWSLDGAIEIR 303 Query: 276 VSRNGNRCDAI 286 + ++ Sbjct: 304 EHLDCALNESE 314 >gi|302884312|ref|XP_003041052.1| hypothetical protein NECHADRAFT_81309 [Nectria haematococca mpVI 77-13-4] gi|256721948|gb|EEU35339.1| hypothetical protein NECHADRAFT_81309 [Nectria haematococca mpVI 77-13-4] Length = 332 Score = 315 bits (807), Expect = 7e-84, Method: Composition-based stats. Identities = 98/317 (30%), Positives = 153/317 (48%), Gaps = 15/317 (4%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RIGTR S LA+ A R SL + P I L T GD+ + L G K Sbjct: 7 TQPPLRIGTRRSNLAMVQAEGIRDSLQKI--APDRTFEIEALKTLGDKDKSTALYSFGAK 64 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 L+T E+E+KL SG+ID VH KDMPTKL +++A R+D RD I +L Sbjct: 65 NLWTTELEEKLTSGDIDVVVHCLKDMPTKLPDTCELTAIPLRDDPRDALIVKASLPYNNL 124 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176 K L +V+GTSS+RR A L R + + RG +ETRL K+++ ++ ++++ G+ Sbjct: 125 KTLPEGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPESEYTCMIMSACGL 184 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 +R+ I + L +D + GQGA+ +E + K EL+ + + + + ER Sbjct: 185 QRVGLGHRITQFLGSKDGGIYHAVGQGALGLEIRKGDTKTLELINQLVDQKSTLACLAER 244 Query: 235 AFLAELDGSCKSAIAGFAYCKGST---LYFYGIVLASDGKIFHEVSRNG---NRCDAINI 288 A L L+G C I + L IV++ DG + + + N +A + Sbjct: 245 ALLRTLEGGCTVPIGVETEWVDESQLLLRMRAIVVSLDGTQSVQDTMDATVKNDDEATAL 304 Query: 289 GRDAAQYIRFISNKNVF 305 GR+ A + + Sbjct: 305 GRELAARLAKGGASEIL 321 >gi|157125875|ref|XP_001654431.1| porphobilinogen deaminase [Aedes aegypti] gi|108873496|gb|EAT37721.1| porphobilinogen deaminase [Aedes aegypti] Length = 534 Score = 315 bits (807), Expect = 7e-84, Method: Composition-based stats. Identities = 100/286 (34%), Positives = 148/286 (51%), Gaps = 13/286 (4%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++ R+G+R S LAL + L ++ P I ++T GDR+ N++L +IG K Sbjct: 6 KEHVIRVGSRKSELALIQTKHVIACLQKLN--PDVQYEIHTMTTVGDRVLNKSLPKIGEK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 LFT+++E L +G +D VHS KD+PT L G+ I A L RED RD + + ++L Sbjct: 64 SLFTKDLEDALRNGGVDFVVHSLKDLPTSLPIGMAIGAVLEREDPRDALVLNEKFRGKTL 123 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176 L SVIGTSSLRR A L R + V D RG + TRL KL+ K I+LA AG+ Sbjct: 124 STLPKGSVIGTSSLRRSAQLARLHPHLVVCDIRGNLNTRLAKLDAEGSKFAGIVLAQAGL 183 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ EK I +++ + + GQGA+ +E N+ ++ + H +T + ER+F Sbjct: 184 VRMGWEKRIDQVIEPSEILYAVGQGALAVECRSNDEYILNMLSKLCHLETQCKILVERSF 243 Query: 237 LAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEV 276 L L G C + +A K + L G V + DGK Sbjct: 244 LKTLGGGCSAPVAVCTSLKRKHDSKSNYLNIQGAVWSLDGKTEIRA 289 >gi|237751827|ref|ZP_04582307.1| porphobilinogen deaminase [Helicobacter bilis ATCC 43879] gi|229373193|gb|EEO23584.1| porphobilinogen deaminase [Helicobacter bilis ATCC 43879] Length = 328 Score = 315 bits (807), Expect = 7e-84, Method: Composition-based stats. Identities = 100/315 (31%), Positives = 153/315 (48%), Gaps = 14/315 (4%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++KP +GTR S LAL A + L + +V+ + TKGD+I + L +IGGK Sbjct: 11 QEKPLVLGTRGSLLALWQANHIKEKLESL----GFQVVLKTIKTKGDKILDAPLAKIGGK 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT+E+E +L+SG ID AVHS KD+P + L + + RED RD F+S + L Sbjct: 67 GLFTKELENELLSGGIDFAVHSLKDVPIAIPPELMLVSITQREDARDCFVSEKYADIASL 126 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GT+SLRR L R R D+ RG ++TRL KL + AI+LA AG+ RL Sbjct: 127 PQGAKVGTTSLRRSMQLKRIRQDLDTQSLRGNVQTRLEKLRKGEFDAIILASAGLNRLDL 186 Query: 182 EKVIK--EILNIEDFPPSPGQGAICIETH-------VNNPKAQELVKVINHEDTWDSVNC 232 + I L I F P+ GQG++ IE + ++++ ++ + N Sbjct: 187 KDDIGFISHLQINQFIPAMGQGSLGIECRDPKYSPDFRDQAIMKVLESLHDSKSALCCNI 246 Query: 233 ERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 ERAF+ L G C+S I A + +V D +R N+ + +D Sbjct: 247 ERAFIQLLGGGCQSPIGIHAQILDSKEIEIQCVVGNLDASKVLTETRVCNKGEVEYALQD 306 Query: 292 AAQYIRFISNKNVFN 306 ++ + Sbjct: 307 MINTLKKNGVMEILE 321 >gi|151941802|gb|EDN60158.1| phorphobilinogen deaminase [Saccharomyces cerevisiae YJM789] Length = 327 Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 93/321 (28%), Positives = 146/321 (45%), Gaps = 17/321 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + IG R S LA+ + + + K P ++ + L T GD+I + L GG Sbjct: 1 MGPETLHIGGRKSKLAVIQSNHVLKLIEE--KYPDYDCKVFTLQTLGDQIQFKPLYSFGG 58 Query: 61 KGLFTEEIEKKLI----SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH--- 113 K L+T+E+E L S ++D VHS KDMPT L +G ++ R D D + Sbjct: 59 KALWTKELEDHLYHDDPSKKLDLIVHSLKDMPTLLPEGFELGGITKRVDPTDCLVMPFYS 118 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILL 171 +SL DL ++GTSS+RR A L R + RG I+TRL KL++ K I+L Sbjct: 119 AYKSLDDLPDGGIVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIIL 178 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ R+ E I + + + + GQGA+ IE + K +++ I + Sbjct: 179 ASAGLMRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCL 238 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVS----RNGNRCDA 285 ERA + L+G C I + T L IV+ +G E + D+ Sbjct: 239 SERALMRTLEGGCSVPIGVESKYNEETKKLLLKAIVVDVEGTEAVEDKIEMLIENVKEDS 298 Query: 286 INIGRDAAQYIRFISNKNVFN 306 + G+ A+ + K + + Sbjct: 299 MACGKILAERMIADGAKKILD 319 >gi|322379565|ref|ZP_08053902.1| porphobilinogen deaminase [Helicobacter suis HS1] gi|322380567|ref|ZP_08054732.1| porphobilinogen deaminase [Helicobacter suis HS5] gi|321147006|gb|EFX41741.1| porphobilinogen deaminase [Helicobacter suis HS5] gi|321147959|gb|EFX42522.1| porphobilinogen deaminase [Helicobacter suis HS1] Length = 302 Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 101/302 (33%), Positives = 155/302 (51%), Gaps = 5/302 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 KP IG+R S LAL A ++ L + + VI + TKGD+I + L +IGGKGL Sbjct: 2 KPLIIGSRGSALALWQARYIQTQLESLGLLS----VIEVVKTKGDKILDVPLAKIGGKGL 57 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E+ L+S +ID AVHS KD+P + ++ L ++ R D RD F+S + + KDL Sbjct: 58 FTKELEELLLSKDIDLAVHSLKDVPVEFVEPLDLACVSVRADARDCFLSFKSPNFKDLPK 117 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GT+SLRR L R R D+ + RG ++TRL +L + AI+LA AG++RL+ + Sbjct: 118 GAKVGTTSLRRSMQLKRKRPDLDTLSLRGNVQTRLKRLEAGEFDAIVLACAGVERLQIKV 177 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + IE+ P GQGA+ +E ++P + +N + ER F+ +L G Sbjct: 178 PYQIPFEIEEMIPCMGQGALGVEMCTSHP-LFNTIAGLNDSTSAFLCGVERLFVKKLGGG 236 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I A KG L +V DG + G A + + K Sbjct: 237 CQVPIGVHASLKGDHLEICAVVGLVDGSQMIKEKIQGLAKQANTLVQTLLDRFLAQGAKE 296 Query: 304 VF 305 + Sbjct: 297 IL 298 >gi|195376491|ref|XP_002047030.1| GJ12153 [Drosophila virilis] gi|194154188|gb|EDW69372.1| GJ12153 [Drosophila virilis] Length = 618 Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 100/325 (30%), Positives = 151/325 (46%), Gaps = 31/325 (9%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K Sbjct: 6 KEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKIGEK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 LFT ++E L +G +D VHS KD+PT L G+ + A L RED RD + ++ Sbjct: 64 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAVGAVLEREDARDALVLRENLKGHTI 123 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGI 176 L SVIGTSSLRR A + R + V D RG + TRL KL+ + I+LA AG+ Sbjct: 124 ATLPKGSVIGTSSLRRTAQIRRQYPHLIVCDIRGNLNTRLAKLDAKESKFAGIILAQAGL 183 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ I ++L D + GQGA+ +E N+ +++ + +T + ER+F Sbjct: 184 VRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDAHVLTMLQKLMCLNTTCRILAERSF 243 Query: 237 LAELDGSCKSAIAGFAYCKGS------------------TLYFYGIVLASDGKIFHEVSR 278 L L G C + +A ++ KG L G V + DG I Sbjct: 244 LKTLGGGCSAPVAVWSNLKGEPSSINANNRQQQQQLEEVGLSLTGAVWSLDGAIEIREHL 303 Query: 279 NGNRCDAINIGRDAAQYIRFISNKN 303 + ++ + +R N Sbjct: 304 DCALNESET------EVLRRKRAAN 322 >gi|300856363|ref|YP_003781347.1| porphobilinogen deaminase [Clostridium ljungdahlii DSM 13528] gi|300436478|gb|ADK16245.1| porphobilinogen deaminase [Clostridium ljungdahlii DSM 13528] Length = 290 Score = 314 bits (806), Expect = 9e-84, Method: Composition-based stats. Identities = 101/294 (34%), Positives = 150/294 (51%), Gaps = 6/294 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F+I TR S LA L + + + T GD+ + L +IGGKGLF Sbjct: 3 FKIATRKSKLAQTQTEIVMDILQKDYNA---KCEKVLIETMGDKRLDIALNKIGGKGLFL 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L+ E D AVHS KD+P + + +I+A + RED+RD F+S +L + Sbjct: 60 KEIELALLKDEADAAVHSMKDVPFDVPEDFEIAAIMQREDVRDAFVSKDKVPFDELPKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR L R DI + RG I+TR++K+ + I+LA AGIKR E+++ Sbjct: 120 KIGTSSNRRAEQLKILRPDIEIAPIRGNIQTRISKIESQNLDGIVLAAAGIKRSHLEELV 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E +ED P+ GQGA+ IET + K + ++ E+T V ER+F+ L+G C Sbjct: 180 TEYFKVEDMVPAIGQGALGIET-KKDSKNKSFFSKLDDENTRICVEAERSFMRTLNGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S I +A T+ G+ + G + GN+ D + +G A+ I Sbjct: 239 STIGAYAKIDKDTINIMGMFMV--GNKLIKKDVTGNKEDYMVLGEKLAKMILKA 290 >gi|71083016|ref|YP_265735.1| hydroxymethylbilane synthase [Candidatus Pelagibacter ubique HTCC1062] gi|71062129|gb|AAZ21132.1| hydroxymethylbilane synthase [Candidatus Pelagibacter ubique HTCC1062] Length = 307 Score = 314 bits (806), Expect = 9e-84, Method: Composition-based stats. Identities = 103/302 (34%), Positives = 172/302 (56%), Gaps = 1/302 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSS-LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M+ + IG+R S LAL +A + R L ++I + TKGD++ ++ L+E+G Sbjct: 1 MKNRKIIIGSRGSKLALIYAEKAREKILKHSKDFGIEEVIIKEIVTKGDQVQDKRLSEVG 60 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF++ IE +L+ +ID AVH+ KDMP++ +GL +L R D R++ IS + LK Sbjct: 61 GKGLFSKTIEVELLEKKIDIAVHALKDMPSEETRGLLTDCFLERNDPREILISKDNKHLK 120 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DLA +S+IGTSS RR+ + + R D++ RG ++TR+ KL N AI+L+YAGI L Sbjct: 121 DLASNSIIGTSSYRREFQIKKIRDDLNCKLIRGNVDTRIRKLKENLYDAIILSYAGIDSL 180 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I + + + P GQG I ++ N+ EL+K ++H+ T S+ ER L Sbjct: 181 GLNQNISQTFSTSEIIPCAGQGVIALQCRDNDESLIELLKQVDHQSTHSSIKAERNVLKV 240 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C++A+ FA +G+ + + + DG + + + A +G + + ++ + Sbjct: 241 LEGDCETAVGAFANIEGNKINLEVELFSLDGSKRFYLKSSESVNKAEELGIEMGKTLKKM 300 Query: 300 SN 301 SN Sbjct: 301 SN 302 >gi|83720099|ref|YP_441428.1| porphobilinogen deaminase [Burkholderia thailandensis E264] gi|257139896|ref|ZP_05588158.1| porphobilinogen deaminase [Burkholderia thailandensis E264] gi|123740194|sp|Q2T071|HEM3_BURTA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|83653924|gb|ABC37987.1| porphobilinogen deaminase, putative [Burkholderia thailandensis E264] Length = 329 Score = 314 bits (806), Expect = 1e-83, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 166/305 (54%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMELPAGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARYPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++ED P+ GQGA+ IE + ++ T +V ERA L GSC Sbjct: 191 IRALLDVEDSLPAAGQGALGIEIAAGRADVAAWLAPLHDHATALAVEAERAVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV---SRNGNRCDAINIGRDAAQYIRFISN 301 + +A A +G L+ G V +DG SR DA+ +GR + + Sbjct: 251 EVPLAAHAVWRGDELHLTGSVSTTDGARVLAARAQSRAATAADALALGRAVSDELERQGA 310 Query: 302 KNVFN 306 + + + Sbjct: 311 RAIVD 315 >gi|325688053|gb|EGD30072.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK72] Length = 306 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 107/302 (35%), Positives = 162/302 (53%), Gaps = 9/302 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L +L Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCVLGAISQREDVRDCLIFRQAGQTLANLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 120 QGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWM 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + L P+ QGA+ +E + + ++L+ + E T V+ ERA LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDEKTAAEVSVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA A ++ DG+ VS G D + A + + Sbjct: 240 MNADCSFPIAALARKNDQDYQLEAMLAKEDGQCIF-VSLQG--QDGQELAEQAVRQLADK 296 Query: 300 SN 301 Sbjct: 297 GA 298 >gi|225706856|gb|ACO09274.1| Porphobilinogen deaminase [Osmerus mordax] Length = 357 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 110/334 (32%), Positives = 157/334 (47%), Gaps = 33/334 (9%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LA L ++ P ++ I+ +ST GD+I + L++IG K Sbjct: 16 SRVIRMGTRKSQLARIQTDYVAEKLKTLY--PDVHLEIVAMSTIGDKILDTALSKIGEKS 73 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119 LFT+E+E L E+D VHS KD+PT L G I A L RE+ D + H +L Sbjct: 74 LFTKELENALERNEVDLVVHSLKDLPTTLPTGFTIGAVLQRENPHDAVVLHPKNAGLTLD 133 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKR 178 L SVIGTSSLRR A L + + D RG + TRL KL+ + AI+LA AG+KR Sbjct: 134 ALPSESVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDEKEDYAAIILAAAGLKR 193 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E + +IL +D + GQGA+ IE + E+V ++H +T ERAFL Sbjct: 194 MGWEGRVSQILGPDDCMYAVGQGALAIEVRARDRDILEMVSTLHHPETVLRCIAERAFLK 253 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG----KIFHEVSR-NGNRCD--------- 284 L+G C +A K L G V + DG K + S GN+ + Sbjct: 254 HLEGGCSVPVAVHTELKDLMLSMTGAVFSLDGADSLKEVMQTSVDTGNQVEEPADTQHVG 313 Query: 285 -------------AINIGRDAAQYIRFISNKNVF 305 A +G D A + ++ Sbjct: 314 VTARNMPQSSQDAAEKLGVDLATLLLSKGAMDIL 347 >gi|119490987|ref|XP_001263154.1| porphobilinogen deaminase Hem3, putative [Neosartorya fischeri NRRL 181] gi|119411314|gb|EAW21257.1| porphobilinogen deaminase Hem3, putative [Neosartorya fischeri NRRL 181] Length = 331 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 103/315 (32%), Positives = 154/315 (48%), Gaps = 13/315 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + P RIGTR S LA+A A R SL + +P + I L T GDR L G K Sbjct: 9 QPPLRIGTRRSNLAMAQAEGIRDSLQKI--VPDRSYEIEALRTLGDRDQLTALYSFGAKS 66 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLK 119 L+T E+E+KL SGE+D VH KDMPTKL +++A PR+D RD I SLK Sbjct: 67 LWTTELEEKLTSGELDVIVHCLKDMPTKLPDTCELAAIPPRDDPRDALIVKAGLPYTSLK 126 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIK 177 L +V+GTSS+RR A L R + + RG +ETRL K+ +++ ++++ AG++ Sbjct: 127 SLPEGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPDSEYTCMVMSAAGLE 186 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R+ + I + L D + GQGA+ +E + K QEL+ + + + + ER+ Sbjct: 187 RVGLKHRISQYLGSRDGGILHAVGQGALGLEIRKGDRKMQELLGQLADQKSTLACLAERS 246 Query: 236 FLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRD 291 + L+G C I L IV++ DG E S +A +G + Sbjct: 247 LMRTLEGGCSVPIGVETEWMPSGDLRMNAIVVSLDGTRSVEDSITSRVEVVDEADALGEE 306 Query: 292 AAQYIRFISNKNVFN 306 A + + N Sbjct: 307 LAGRLVKAGAGKILN 321 >gi|91762559|ref|ZP_01264524.1| hydroxymethylbilane synthase [Candidatus Pelagibacter ubique HTCC1002] gi|91718361|gb|EAS85011.1| hydroxymethylbilane synthase [Candidatus Pelagibacter ubique HTCC1002] Length = 307 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 103/302 (34%), Positives = 172/302 (56%), Gaps = 1/302 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSS-LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M+ + IG+R S LAL +A + R L ++I + TKGD++ ++ L+E+G Sbjct: 1 MKNRKIIIGSRGSKLALIYAEKAREKILKHSKDFGIEEVIIKEIVTKGDQVQDKRLSEVG 60 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF++ IE +L+ +ID AVH+ KDMP++ +GL +L R D R++ IS + LK Sbjct: 61 GKGLFSKTIEVELLEKKIDIAVHALKDMPSEETRGLLTDCFLERNDPREILISKDNKHLK 120 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DLA +S+IGTSS RR+ + + R D++ RG ++TR+ KL N AI+L+YAGI L Sbjct: 121 DLASNSIIGTSSYRREFQIKKIRDDLNCKLIRGNVDTRIRKLKENLYDAIILSYAGIDSL 180 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I + + + P GQG I ++ N+ EL+K ++H+ T S+ ER L Sbjct: 181 GLNQNISQTFSTSEIIPCAGQGVIALQCRDNDESLIELLKQVDHQSTHSSIKAERNVLKV 240 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C++A+ FA +G+ + + + DG + + + A +G + + ++ + Sbjct: 241 LEGDCETAVGAFANIEGNKINLEVELFSLDGSKRFYLKSSESVDKAEELGIEMGKTLKKM 300 Query: 300 SN 301 SN Sbjct: 301 SN 302 >gi|237740509|ref|ZP_04570990.1| porphobilinogen deaminase [Fusobacterium sp. 2_1_31] gi|229422526|gb|EEO37573.1| porphobilinogen deaminase [Fusobacterium sp. 2_1_31] Length = 301 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 111/303 (36%), Positives = 148/303 (48%), Gaps = 7/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60 K+ IG+R S LALA A ++SL + P I + T GD+ N + Sbjct: 2 KRHVVIGSRGSILALAQASLVKNSLEANY--PDLTFEIKEIVTSGDKDLKSNWENSNASL 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV IS L Sbjct: 60 KSFFTKEIEQELLDGQIDIAVHSMKDMPAVSPKGLICGAIPDREDARDVLISKNG-FLVT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 LPQGAKIGTSSLRRVMNLKAIRPDFEIKHLRGNIHTRLKKLETEDYDAIILAAAGLKRTG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E L+ E FPP+P QG + I+ N+ + + ++K I++ED V ER F Sbjct: 179 MADKITEYLSGEAFPPAPAQGVLYIQCRENDEEIKGILKSIHNEDIAKIVEIEREFSKIF 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DG C + + ++ + F + DGK V + I AA+ I+ Sbjct: 239 DGGCHTPMGCYSQVDEDKIKFIAAY-SHDGKQ-IRVVIEDDLTKGKEIAHMAAEEIKAKI 296 Query: 301 NKN 303 NK Sbjct: 297 NKG 299 >gi|332363838|gb|EGJ41617.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK355] Length = 306 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 110/302 (36%), Positives = 161/302 (53%), Gaps = 9/302 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQSGQTLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + L P+ QGA+ +E + + + L+ + E T V ERA LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA FA G ++ DG+ VS G D + A + + Sbjct: 240 MNADCTFPIAAFAQKNGQNYQLEAMLAKEDGQCIF-VSLQG--QDGQELAEQAVRQLADK 296 Query: 300 SN 301 Sbjct: 297 GA 298 >gi|170703456|ref|ZP_02894225.1| porphobilinogen deaminase [Burkholderia ambifaria IOP40-10] gi|170131633|gb|EDT00192.1| porphobilinogen deaminase [Burkholderia ambifaria IOP40-10] Length = 304 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 104/293 (35%), Positives = 162/293 (55%), Gaps = 5/293 (1%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E+E L G Sbjct: 1 MWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELENALADGR 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+GTSSLRR+A Sbjct: 59 ADLAVHSLKDVPMALPDGFALTAIMEREDPRDAFVSNDYASLDALPPGAVVGTSSLRREA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 +L + V+ RG ++TRL+KL+ AI+LA AG+KRL E I+ ++++ED PP Sbjct: 119 MLRARYPHLDVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEARIRTLIDVEDSPP 178 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + GQGA+ IE + + ++ T +V ER L GSC+ +A A + Sbjct: 179 AAGQGALGIEIAAHRTDVAAWLAPLHDPRTALAVEAERMVSRALGGSCEVPLAAHAVWRA 238 Query: 257 STLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNKNVFN 306 LY G V +DG+ G DA+ +GR + + ++ N Sbjct: 239 GELYLTGRVSTTDGQRVLTAEECGAVMTVADALALGRAVSDELEAQGALDIVN 291 >gi|225025796|ref|ZP_03714988.1| hypothetical protein EUBHAL_00021 [Eubacterium hallii DSM 3353] gi|224956880|gb|EEG38089.1| hypothetical protein EUBHAL_00021 [Eubacterium hallii DSM 3353] Length = 844 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 160/288 (55%), Gaps = 6/288 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +IGTR S LAL + + P + I+ + TKGD+I +++LT GGKG Sbjct: 2 KNIIKIGTRKSKLALIQTDIVKDKIKKA--FPEIEVEIVKIDTKGDQILDKSLTSFGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT E+E +L+SG +D AVHSAKDMP +GL I A L R D+RD F++ T + L++L Sbjct: 60 VFTAELEAELLSGAVDIAVHSAKDMPMDFPEGLGIGAVLDRADVRDTFVTTTGKKLEELE 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S++GTSSLRR+ L+ +++ RG ++TRL+KL + + I+LA AGI+RL E Sbjct: 120 PGSIVGTSSLRRELLIKEINPYVTIKLLRGNVQTRLSKLRDGQYDGIILAAAGIERLGYE 179 Query: 183 K---VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 K + + L+ + F P+ GQG + +E+ V + + E++ I+ E + ERAFL Sbjct: 180 KEEGLHYQYLDPDVFLPAAGQGILAVESRVEDAEMAEILAAIHSEKAECLLMAERAFLKT 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 + GSC + A + + + DG + N DAI Sbjct: 240 IGGSCNAPAAALCREENGEFSMRAMYV-KDGIHSRKTYMTVNIEDAIA 286 >gi|162449896|ref|YP_001612263.1| hydroxymethylbilane synthase [Sorangium cellulosum 'So ce 56'] gi|189028159|sp|A9FDP9|HEM3_SORC5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|161160478|emb|CAN91783.1| Hydroxymethylbilane synthase [Sorangium cellulosum 'So ce 56'] Length = 300 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 97/297 (32%), Positives = 158/297 (53%), Gaps = 6/297 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 + TR S LALA + SL +P ++ + + T GD+ +R+L +IGGKGLF Sbjct: 5 LTLATRRSALALAQSRAFARSLEAA--VPDLSLRELEVVTSGDKTQDRSLQDIGGKGLFI 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ D AVHS KD+P ++ L ++ RED RD ++ + L +L + Sbjct: 63 KELEEALLDRRADFAVHSIKDVPAEIAPALCLACIPAREDPRDALVTRSGALLAELPAGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR L R D+ + RG ++TRL K+ + A++LA AG+KRL E Sbjct: 123 RVGTSSLRRAVALREARPDLVIEPVRGNVDTRLRKVFDGVFDAVVLALAGLKRLGLEARA 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L+ E P+ GQGA+ IE + ++++ + +T V+ ERA +A ++GSC+ Sbjct: 183 TEVLSPEVSLPAIGQGALGIECRTADDSVRDVLGTLADAETTICVSAERAVMAAVEGSCR 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN----GNRCDAINIGRDAAQYIRF 298 + +A +A G L+ ++ DG R GN +A +G D ++ Sbjct: 243 TPVAAYAVRDGGALWLRALLAEPDGSRLRRAERRLSWPGNTREAERLGADLGAELKK 299 >gi|70997451|ref|XP_753473.1| hydroxymethylbilane synthase [Aspergillus fumigatus Af293] gi|66851109|gb|EAL91435.1| hydroxymethylbilane synthase, putative [Aspergillus fumigatus Af293] gi|159126797|gb|EDP51913.1| hydroxymethylbilane synthase, putative [Aspergillus fumigatus A1163] Length = 341 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 151/319 (47%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++ F IGTR S LAL ++L P + I T GD+ T L E K Sbjct: 15 SRRTFTIGTRKSKLALLQTDLVVAALKK--SWPEYTFQIHSQETAGDKNTVIALREFTTK 72 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118 L+T+E+E+ L++G++D VHS KD+PT+L + + RED RDV + S Sbjct: 73 NLWTQELEELLMAGDVDLIVHSLKDVPTQLPPSCTLGPMMEREDTRDVLVMKKGLPNMSF 132 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGI 176 ++ SV+GTSS+RR A L R + V D RG I TRL KL+ I+LA AG+ Sbjct: 133 SEMPAGSVVGTSSIRRTAQLARRYPHLKVQDVRGNIGTRLAKLDAEDSPFTCIVLAAAGL 192 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 RL E I + L+ ++ + GQGA+ +E ++ ++++ I H+ T + ER Sbjct: 193 LRLGMEDRISQYLDSKNGGMLYAVGQGALGVEIRKDDKVLRDMLNSIGHQKTTLACLAER 252 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGN---RCDAI 286 + L L+G C + + L IV++ DG+ EV +G+ A Sbjct: 253 SLLRTLEGGCSAPLGVETEWVQDSDRSSKLRMRAIVVSVDGRESAEVEVDGSVDTAESAE 312 Query: 287 NIGRDAAQYIRFISNKNVF 305 G A+ + + Sbjct: 313 EFGVTVAKALVEKGAGEIL 331 >gi|125975012|ref|YP_001038922.1| hydroxymethylbilane synthase [Clostridium thermocellum ATCC 27405] gi|256005102|ref|ZP_05430072.1| porphobilinogen deaminase [Clostridium thermocellum DSM 2360] gi|281418570|ref|ZP_06249589.1| porphobilinogen deaminase [Clostridium thermocellum JW20] gi|167008812|sp|A3DIF0|HEM3_CLOTH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|125715237|gb|ABN53729.1| hydroxymethylbilane synthase [Clostridium thermocellum ATCC 27405] gi|255990953|gb|EEU01065.1| porphobilinogen deaminase [Clostridium thermocellum DSM 2360] gi|281407654|gb|EFB37913.1| porphobilinogen deaminase [Clostridium thermocellum JW20] gi|316939173|gb|ADU73207.1| porphobilinogen deaminase [Clostridium thermocellum DSM 1313] Length = 292 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 94/297 (31%), Positives = 158/297 (53%), Gaps = 7/297 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+G+R S LA+ A S+ + P I ++ + T GD+I ++T+ +IGGKGLF Sbjct: 2 KIRVGSRESKLAVRQAQIVIDSIKKYN--PDIEIELVTMKTTGDKILDKTIDKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+++ L+ G++D VHS KDMP + L I A RED RDV + ++ D + Sbjct: 60 VKELDRALLDGKVDITVHSFKDMPMDIDDRLPIVAVSKREDPRDVLVLPKGKNEIDF--N 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IG SS RRK + + +V RG + TRL KL+ + AI LAYAG+KRL E+ Sbjct: 118 GPIGCSSSRRKIQIEKIYPGCTVEPIRGNVLTRLEKLDKGEYSAIALAYAGLKRLGLEER 177 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + + ++ P+ QG I ++ + ++ + +D+WD ER+F+ L+G C Sbjct: 178 IWRVFSTDEIVPAACQGIIAVQARKDFD--ASILANFHDKDSWDVSVAERSFIKALNGGC 235 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 S A + +G + G + +GKI+ ++++ G+R +G A + ++ Sbjct: 236 SSPSAAYGVIQGEKIVLTGFYVDKNGKIY-KMTKTGDRNQGEALGYSLAMEMLKGAD 291 >gi|121711982|ref|XP_001273606.1| porphobilinogen deaminase Hem3, putative [Aspergillus clavatus NRRL 1] gi|119401758|gb|EAW12180.1| porphobilinogen deaminase Hem3, putative [Aspergillus clavatus NRRL 1] Length = 333 Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 97/314 (30%), Positives = 149/314 (47%), Gaps = 15/314 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA+ A R +L + P + I+ L T GDR + L G K L+ Sbjct: 11 PLRIGTRRSKLAIVQAEGIRDNLQKL--SPDRSFEIVTLHTLGDRDKSTALYSFGAKNLW 68 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T E+E+KL SGE+D VH KDMPT L ++A PR+D RD I +L+ L Sbjct: 69 TAELEEKLNSGELDVVVHCLKDMPTTLPDTCDLAAIPPRDDPRDALIIKSSLPYTTLQSL 128 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRL 179 +++GTSS+RR A L R + + RG +ETRL K+ + + ++++ AG++RL Sbjct: 129 PAGAIVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPDGEYTCMVMSAAGLERL 188 Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + I + L D + GQGA+ +E + EL+ + E + + ERA + Sbjct: 189 GLQHRISQYLGSRDGGILHAVGQGALGLEIRKGDSATLELLDRLGDEGSTLACLAERALM 248 Query: 238 AELDGSCKSAIAGFAYCKG---STLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRD 291 L+G C I L IV++ DG S ++ +AI +G + Sbjct: 249 RALEGGCSVPIGVETEWVDWAARLLAMRAIVVSLDGTRSVLDSVEVRVQSKEEAIALGEE 308 Query: 292 AAQYIRFISNKNVF 305 A + + Sbjct: 309 LAARLVKAGADGIL 322 >gi|328786215|ref|XP_624261.3| PREDICTED: porphobilinogen deaminase-like [Apis mellifera] Length = 357 Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 107/281 (38%), Positives = 154/281 (54%), Gaps = 7/281 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + R+G+R S LAL L + H P II +STKGD+I +++L +IG K Sbjct: 6 TRDVIRVGSRKSELALKQTKYVIECLKEYH--PTKEFQIITMSTKGDKILDKSLPKIGEK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSL 118 LFTEE+E L SG +D VHS KD+PT L +G+ + A L RED RD + + ++L Sbjct: 64 SLFTEELELALESGRVDFVVHSLKDLPTSLPEGMALGAILKREDPRDAVVMSKKYKNKTL 123 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176 L SVIGTSSLRR A L R + V + RG + TRL KL++ AI+LA AG+ Sbjct: 124 STLPEGSVIGTSSLRRSAQLARNMPHLKVENIRGNLNTRLRKLDDENGPFAAIILAAAGL 183 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 KR+ E I ++L E+ + GQGA+ +E + K L++ + +T CER+F Sbjct: 184 KRMNWENRISQLLEPEEALYAVGQGALGVECRETDWKILSLLEPLYDVETTLRCVCERSF 243 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277 L L G C + +A + K L G V + DG+ F + + Sbjct: 244 LKTLGGGCSAPVAVSSTLKNKILTVTGAVWSLDGQKFIKDT 284 >gi|109947886|ref|YP_665114.1| porphobilinogen deaminase [Helicobacter acinonychis str. Sheeba] gi|123066146|sp|Q17W61|HEM3_HELAH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|109715107|emb|CAK00115.1| hemC [Helicobacter acinonychis str. Sheeba] Length = 306 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 93/303 (30%), Positives = 151/303 (49%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IG+R S LAL A + L I + T GD+I + L +IGGKGLF Sbjct: 3 KLVIGSRGSELALWQANYIKERLKKECF---IESEIQIVKTTGDKILDAPLNKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L Sbjct: 60 TKELEELLLKGTIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSTKFPDLMSLPKG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183 + +GT+SLRR L R D+ RG ++TRL KL + + AI+LA AG+ RL + Sbjct: 120 AKVGTTSLRRSMQLKCKRKDLDTESLRGNVQTRLKKLESGEFDAIILAEAGLCRLNIQGA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ ++E+ PS GQGA+ +E ++ ++ +N E++ + ER F+ L+G Sbjct: 180 KYRKAFSVEEMIPSMGQGALGVEMLKSHKHFTA-LQKLNDEESAFCCHLEREFIKGLNGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ + A G + I+ +G+ + G++ A + ++ + + Sbjct: 239 CQIPVGVHASLMGEKVKIQAILGLPNGEEVIAKEKQGDKNKAFDSVQELLEAFLQSGARE 298 Query: 304 VFN 306 + Sbjct: 299 ILE 301 >gi|327469193|gb|EGF14665.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK330] Length = 306 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 111/302 (36%), Positives = 163/302 (53%), Gaps = 9/302 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 182 --EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + L P+ QGA+ +E + + +L+ + E T V ERA LA+ Sbjct: 180 DQSHLHIQPLETSLCLPAISQGALAVECREEDKELLQLLATVQDEKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA FA KG ++ DG+ VS G D + A + + Sbjct: 240 MNADCTFPIAAFAQKKGQDYQLEAMLAKEDGQCVF-VSLKG--QDGQELAEQAVRQLADK 296 Query: 300 SN 301 Sbjct: 297 GA 298 >gi|257463595|ref|ZP_05627986.1| porphobilinogen deaminase [Fusobacterium sp. D12] gi|317061149|ref|ZP_07925634.1| porphobilinogen deaminase [Fusobacterium sp. D12] gi|313686825|gb|EFS23660.1| porphobilinogen deaminase [Fusobacterium sp. D12] Length = 301 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 101/301 (33%), Positives = 156/301 (51%), Gaps = 6/301 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL--TEI 58 M K +G+R S LALA + L + P I + T+GD+ +E+ Sbjct: 1 MLKHHIILGSRGSILALAQTNWVKKQLQRHY--PQLTFSIQVIETQGDKDLTSHFGNSEL 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 K FT+EIEK L+ GEID AVHS KD+P+ GL A RED+RDV +S + ++L Sbjct: 59 SLKSFFTKEIEKSLLDGEIDIAVHSMKDVPSSSPVGLICGAIPVREDVRDVLVSTSGKTL 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 DL S++GTSSLRR + + R D+ + RG I TRL KL AI+LA AG+KR Sbjct: 119 ADLPKGSILGTSSLRRIQNIKQLRPDLEIKALRGNIHTRLKKLEEGHYDAIVLAAAGLKR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E+ I E LN F P+P QGA+ I+ + + + +++ I+ E+ + ER F Sbjct: 179 VGLEEKITEYLNPTVFSPAPAQGALYIQCREKDEETRNILQSIHDENLAKILEIEREFSR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 DG C + + ++ +G ++F+ + + ++ + I AAQ I+ Sbjct: 239 IFDGGCHTPMGCYSKVEGKKIFFHAMYSHKEKS--YQTIITESITKGKEIAIMAAQEIQK 296 Query: 299 I 299 + Sbjct: 297 M 297 >gi|195014661|ref|XP_001984055.1| GH15218 [Drosophila grimshawi] gi|193897537|gb|EDV96403.1| GH15218 [Drosophila grimshawi] Length = 612 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 100/305 (32%), Positives = 149/305 (48%), Gaps = 24/305 (7%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K Sbjct: 6 KDKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKIGEK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 LFT ++E L +G +D VHS KD+PT L G+ + A L RED RD + ++ Sbjct: 64 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAVGAVLEREDARDALVLRENLKGHTI 123 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 +L SVIGTSSLRR A + R D+ V D RG + TRL KL+ ++K I+LA AG+ Sbjct: 124 ANLPKGSVIGTSSLRRTAQIRRQYPDLIVCDIRGNLNTRLAKLDAKDSKFAGIILAQAGL 183 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+F Sbjct: 184 VRMGWMARISQVLEPTDLLYAVGQGALAVECRANDNQVLGMLQKLMCLNTTCRILAERSF 243 Query: 237 LAELDGSCKSAIAGFAYCKGS-----------------TLYFYGIVLASDGKIFHEVSRN 279 L L G C + +A ++ G L G V + DG I + Sbjct: 244 LKTLGGGCSAPVAVWSNLNGEPSSINREQLLQQQQQEVGLSLTGAVWSLDGAIEIREHLD 303 Query: 280 GNRCD 284 D Sbjct: 304 CALND 308 >gi|325693629|gb|EGD35548.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK150] Length = 306 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 110/302 (36%), Positives = 162/302 (53%), Gaps = 9/302 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + L P+ QGA+ +E + + ++L+ + E T V ERA LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDEKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA FA G ++ DG+ VS G D + A + + Sbjct: 240 MNADCTFPIAAFAQKNGQDYQLEAMLAKEDGQCVF-VSFQG--QDGQELAEQAVRQLADK 296 Query: 300 SN 301 Sbjct: 297 GA 298 >gi|254577639|ref|XP_002494806.1| ZYRO0A10098p [Zygosaccharomyces rouxii] gi|238937695|emb|CAR25873.1| ZYRO0A10098p [Zygosaccharomyces rouxii] Length = 327 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 93/321 (28%), Positives = 150/321 (46%), Gaps = 18/321 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ RIG R S LA+ + + + K P + L T GD+ ++ L GG Sbjct: 1 MSRR-IRIGGRQSQLAIVQSELVKHLIEQ--KFPDITCSVFALQTLGDQQQSKPLYSFGG 57 Query: 61 KGLFTEEIEKKLIS----GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA- 115 K L+T+E+E L ++D VHS KDMPT L G ++ R D D + Sbjct: 58 KALWTKELEDLLYDEDDNRKLDIIVHSLKDMPTTLPDGFELGGITERVDPSDCLVMPQGS 117 Query: 116 --QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILL 171 ++L L SV+GTSS+RR A L R + RG + TR+ KL++ N I+L Sbjct: 118 PHKNLDTLPAGSVVGTSSVRRSAQLKRKYPHLRFESIRGNLHTRIRKLDDPQNDYQCIIL 177 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+KRL I + + GQGA+ IE + + ++++ + H++T Sbjct: 178 ASAGMKRLGLGYRITNTFDSSVMYHAVGQGALGIEIRAQDKEMKKILDAVCHKNTTVCCL 237 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNRC----DA 285 ER + L+G C I + +T L+ GIV++ DGK E+++ D+ Sbjct: 238 AERQLMRSLEGGCSVPIGVGSRYDETTGYLHLRGIVVSVDGKQAVELNQELAINDVIRDS 297 Query: 286 INIGRDAAQYIRFISNKNVFN 306 I G+ A+ + + + Sbjct: 298 IECGKLLAEKMISNGARKILE 318 >gi|313637685|gb|EFS03063.1| porphobilinogen deaminase [Listeria seeligeri FSL S4-171] Length = 274 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 105/270 (38%), Positives = 151/270 (55%), Gaps = 5/270 (1%) Query: 39 VIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQIS 98 I + TKGDRI + TL+++GGKGLF E+E+ L G ID AVHS KD+P+ + +GL I Sbjct: 1 EIKEIVTKGDRILDVTLSKVGGKGLFVSEVEQALSDGAIDFAVHSMKDVPSSIKEGLTIG 60 Query: 99 AYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRL 158 A RE D F+ +T +S DL +VIGTSSLRR A +LR R D + RG I+TRL Sbjct: 61 AIPKRESALDCFVFNTVESFHDLPTAAVIGTSSLRRAAQILRQRPDFVIKPIRGNIDTRL 120 Query: 159 NKLNNNKAHAILLAYAGIKRLKKEKVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQ 215 KL++ AI+LA AG+ R+ + E ++ E P+ GQGA+ IE N+ + Sbjct: 121 QKLHDENFDAIILAKAGLSRMGWLENTTLKLEDISPELCLPAVGQGALAIECRENDKQIC 180 Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275 +++ I+HE+T V ER FL +L+G C+ IAGFA + F G+V +DG Sbjct: 181 DMLASIHHEETGICVEAERVFLKKLNGGCEIPIAGFATKTAGQIKFKGLVGNADGSTILS 240 Query: 276 VSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 G + + IG A+ + + Sbjct: 241 AENIG--ENPMTIGNQVAEALLSEGADTII 268 >gi|296268254|ref|YP_003650886.1| porphobilinogen deaminase [Thermobispora bispora DSM 43833] gi|296091041|gb|ADG86993.1| porphobilinogen deaminase [Thermobispora bispora DSM 43833] Length = 303 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 97/297 (32%), Positives = 154/297 (51%), Gaps = 6/297 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S +A + + L ++ ++T GD ++ LT++GG G+F Sbjct: 4 PLRLGTRKSLMATSQSRRVAERLAQATGRRS---ELVGITTFGD-VSRAHLTQLGGTGVF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 E+ LI+GE+D AVHS KD+PTK + I+A PR+D RD F+ +L Sbjct: 60 VSELRNALIAGEVDFAVHSLKDLPTKGDDRIVIAAIPPRDDPRDAFVGR--VPFSELPPG 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT S RR A L R D+ + RG +TRL K+ + + I+LA AG+ R+ +E+ Sbjct: 118 ARVGTGSPRRIAQLRMLRPDLEYVPIRGNADTRLGKVTSGELDGIVLAAAGLGRIGREEA 177 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I ++ +E P+PGQGA+ +E + EL+ I+ T D+V ER+ LA L+ C Sbjct: 178 IAQVFEVEQVLPAPGQGALAVECRADRADLIELLSAIDDRATRDAVTAERSVLAALEAGC 237 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 + + A G+ L V++ DG+ S +G A+ +GRD A + Sbjct: 238 AAPVGAHASGDGNVLSLTAAVVSVDGRRSVRKSVSGPASAAMELGRDLAAAMLAEGA 294 >gi|332798468|ref|YP_004459967.1| Porphobilinogen deaminase [Tepidanaerobacter sp. Re1] gi|332696203|gb|AEE90660.1| Porphobilinogen deaminase [Tepidanaerobacter sp. Re1] Length = 293 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 109/294 (37%), Positives = 160/294 (54%), Gaps = 6/294 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK ++G+R S LAL S L + P + +I + T GD+ N + E+G KG Sbjct: 2 KKIVKVGSRQSQLALVQTELVISQLKE--HFPQWDFKLITVKTTGDKFLNSNMYELG-KG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 F +EIE+ L+SG ID AVHS KD+P +L +GL ISA RED RDVFIS + +L Sbjct: 59 AFVKEIEEALLSGAIDMAVHSLKDVPHELPEGLAISAITRREDPRDVFISADDRRFSELD 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IGTSS+RR L + R DI + RG I TR+ K+ I+LA AG+KRL E Sbjct: 119 TGAKIGTSSMRRMCELNKLRQDIECVPIRGNINTRIKKIKTCGLDGIVLAAAGVKRLGME 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +I + + ++ P+ GQGA+ +ET ++ + VK IN ++T + ERAF+ + G Sbjct: 179 NLITDYFSPDEIVPAVGQGALAVETRADD-EMSLFVKYINDDETTCATGAERAFMKVVGG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 SCK + +A L G++ DG + G + +A IG A+ + Sbjct: 238 SCKQPMGAYAEIFDDALKLIGMI-ERDG-VVKWGKLEGRKSEAEQIGIRLAEEL 289 >gi|221134062|ref|ZP_03560367.1| porphobilinogen deaminase [Glaciecola sp. HTCC2999] Length = 328 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 101/324 (31%), Positives = 158/324 (48%), Gaps = 37/324 (11%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + A ++ L + P ++ ++P+STKGDRI + L ++GGKGLF +E+E + G Sbjct: 1 MWQAEYVQAQLKAHY--PDMSVNLVPMSTKGDRILDTPLAKVGGKGLFIKELEVAMQEGR 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 D AVHS KD+P + +G + A PRE+ D F+S+T + L +V+GTSSLRR+A Sbjct: 59 ADIAVHSMKDVPVEFPEGFGLHAICPRENPFDAFVSNTYDDIDSLPKGAVVGTSSLRRQA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 L R D+++ D RG + TRL KL+ + AI+LA AG+ RLK I+ ++ P Sbjct: 119 QLRARRPDLTIKDLRGNVNTRLAKLDAGEYDAIILACAGLIRLKMHDRIRSEIDPLTSLP 178 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + GQGA+ IE +N ++++ + +T V ERA A+L G C+ I FA + Sbjct: 179 AVGQGAVGIECRDDNLALIDVLQCLACPETTIRVMAERAMNAKLQGGCQVPIGSFATLET 238 Query: 257 ST-----LYFYGIVLASDGKIFHEVS------------------------------RNGN 281 S LY G+V DG + E + Sbjct: 239 SQDGYRELYLKGLVATVDGSVLLESDGSVILAKTAEEMMNDITDTSVTLNSPLEQIEEVH 298 Query: 282 RCDAINIGRDAAQYIRFISNKNVF 305 AI +G+ A + ++ Sbjct: 299 IQQAIQLGQHIASQLIEQGAADIL 322 >gi|121713720|ref|XP_001274471.1| hydroxymethylbilane synthase, putative [Aspergillus clavatus NRRL 1] gi|119402624|gb|EAW13045.1| hydroxymethylbilane synthase, putative [Aspergillus clavatus NRRL 1] Length = 339 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 99/320 (30%), Positives = 155/320 (48%), Gaps = 17/320 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K F IGTR S LAL+ S+L + P + I T GDR T L E K Sbjct: 13 SRKTFTIGTRSSKLALSQTDLIASALKK--RWPDYTFEIHSRETAGDRNTTIALREFTTK 70 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118 L+T+E+E+ L++G++D VHS KD+PT L + RED RDV + SL Sbjct: 71 NLWTQELEELLMAGDVDLIVHSLKDVPTLLPSSCTLGPMTEREDSRDVLVMKKGLPRMSL 130 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGI 176 ++ SV+GTSS+RR A L R + + D RG I TRL KL+ I+LA AG+ Sbjct: 131 SEMPEGSVVGTSSIRRTAQLARRYPHLKIQDVRGNIGTRLAKLDAEDSPFTCIILAAAGL 190 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 RL + I + L+ ++ + GQGA+ +E ++ E+++ I H++T + ER Sbjct: 191 LRLGLDDRITQYLDSKNGGMLYAVGQGALGVEIRKDDQLLHEMLQTIGHKETTLACLAER 250 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 + L L+G C + + L +V++ DG+ E+ +G+ +A Sbjct: 251 SLLRTLEGGCSAPLGVETEWVKDSTGASKLRMRAVVVSVDGRESAEIEVDGSIDTNEEAE 310 Query: 287 NIGRDAAQYIRFISNKNVFN 306 N G A+ + + Sbjct: 311 NFGVTVAKSLVEKGAGKILE 330 >gi|84494981|ref|ZP_00994100.1| porphobilinogen deaminase [Janibacter sp. HTCC2649] gi|84384474|gb|EAQ00354.1| porphobilinogen deaminase [Janibacter sp. HTCC2649] Length = 329 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 93/304 (30%), Positives = 153/304 (50%), Gaps = 8/304 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+GTR S LA + L + H++ ++ ++T GDR L +GG G+F Sbjct: 2 TLRLGTRRSALATTQSGWVADQLRAL----GHDVELVEITTDGDRDRTTPLATMGGTGVF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L +G +D AVHS KD+PT L ++A PRED RD ++ +L +L Sbjct: 58 VSALRDALRAGTVDLAVHSLKDLPTTPEDDLAVAAIPPREDPRDALVARDGLTLGELPSG 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S +GT S RR+A L + + + RG ++TRL ++ + A++LA AG+ RL + V Sbjct: 118 STVGTGSPRRRAQLEALGLGLDIRELRGNVDTRLGRVTSGDLDAVVLAQAGLARLGRTSV 177 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E+++ P+PGQGA+ +E ++ ++ V ++ DT V+ ERA L+EL+ C Sbjct: 178 VTEVIDPIQMLPAPGQGALAVEVRADDAATRDAVAALDDADTRACVDAERAVLSELEVGC 237 Query: 245 KSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 + + A G L +V + DG S G+ DA IGR A+ + Sbjct: 238 SAPVGALAEIVLGDDGDELSLRAVVASPDGTGDIRRSATGSPTDADGIGRRLARLLLEDG 297 Query: 301 NKNV 304 ++ Sbjct: 298 AADL 301 >gi|291298238|ref|YP_003509516.1| porphobilinogen deaminase [Stackebrandtia nassauensis DSM 44728] gi|290567458|gb|ADD40423.1| porphobilinogen deaminase [Stackebrandtia nassauensis DSM 44728] Length = 307 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 106/309 (34%), Positives = 162/309 (52%), Gaps = 9/309 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR SP+ALA A ++L + P + I+P +T GD+ L+++GG Sbjct: 1 MSVK-VRIGTRSSPMALAQADRVSAALTAL--DPDVAVEIVPFTTSGDKWMG-PLSQLGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSL 118 KG FT+E++ L+ G D VH KD+P L +G I+A+L R+D+RD + SL Sbjct: 57 KGAFTKEVDAALVEGTCDLCVHCVKDIPGDRDLPEGTVIAAHLERDDVRDALVHPGGLSL 116 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 DL S IGTSS RR A L +S + RG TRL KL+ A+LLA +G++R Sbjct: 117 SDLPDGSRIGTSSPRRAAQLALHWPRLSPLPIRGNANTRLAKLDAGDFDALLLAVSGLER 176 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L I EIL+++ P+ G G + ++ ++ ++LV ++ T ER+ L Sbjct: 177 LALTDRITEILDVDTMVPAIGSGTLALQCRTDDTPVRDLVARLDDPMTSWRTEAERSMLR 236 Query: 239 ELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L+G C S IAG+A + L +G V++ DG E +G DA +G A+ + Sbjct: 237 ALNGHCHSPIAGYAIQESEGVLSLHGRVMSLDGSTVLEARESG--ADATALGTSVAEALL 294 Query: 298 FISNKNVFN 306 + + + Sbjct: 295 RQGARELID 303 >gi|332365713|gb|EGJ43471.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1059] Length = 306 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 110/302 (36%), Positives = 161/302 (53%), Gaps = 9/302 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKKLH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISKREDVRDCLIFRQAGQTLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + L P+ QGA+ +E + + + L+ + E T V ERA LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLATVQDEKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA A KG ++ DG+ VS G D + A + + Sbjct: 240 MNADCTFPIAALAQKKGQDYQLEAMLAKEDGQCVF-VSLQG--QDGQQLAEQAVRQLADK 296 Query: 300 SN 301 Sbjct: 297 GA 298 >gi|238508247|ref|XP_002385322.1| porphobilinogen deaminase Hem3, putative [Aspergillus flavus NRRL3357] gi|220688841|gb|EED45193.1| porphobilinogen deaminase Hem3, putative [Aspergillus flavus NRRL3357] Length = 333 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 97/317 (30%), Positives = 155/317 (48%), Gaps = 15/317 (4%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RIGTR S LA+ A R SL P + I L T GD+ + L G K Sbjct: 8 AQPPLRIGTRRSKLAIVQAEGIRDSLQK--TAPNRSYEIETLHTLGDKDKSTALYNFGAK 65 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 L+T E+E+KL SG++D VH KDMPT L + ++A R+D RD + SL Sbjct: 66 SLWTSELEEKLTSGQLDVIVHCLKDMPTTLPESCDLAAITLRDDPRDALVIKAGLPYTSL 125 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176 + L +V+GTSS+RR A LLR + + RG +ETRL K++N ++ ++++ AG+ Sbjct: 126 QTLPEGAVVGTSSVRRSAQLLRLYPHLRFANLRGNVETRLAKVDNPESEYTCMIMSAAGL 185 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 +R+ + I + + +D + GQGA+ +ET + QEL+ + E + + ER Sbjct: 186 ERIGLKHRINQYIGSKDGGILHAVGQGALGLETRKGDSSTQELLNKLVDEKSTLACLAER 245 Query: 235 AFLAELDGSCKSAIAGFAYCKGST---LYFYGIVLASDGKIFHEVSRNG---NRCDAINI 288 A L L+G C I + L IV++ DG + + + + +A Sbjct: 246 ALLRTLEGGCSVPIGVETEWVDQSEYFLRMRAIVVSLDGTQSVQDTIDATVRTKDEATVF 305 Query: 289 GRDAAQYIRFISNKNVF 305 G++ A + + Sbjct: 306 GKELATRLVTAGADAIL 322 >gi|172061376|ref|YP_001809028.1| porphobilinogen deaminase [Burkholderia ambifaria MC40-6] gi|171993893|gb|ACB64812.1| porphobilinogen deaminase [Burkholderia ambifaria MC40-6] Length = 304 Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats. Identities = 104/293 (35%), Positives = 161/293 (54%), Gaps = 5/293 (1%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E+E L G Sbjct: 1 MWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELENALADGR 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+GTSSLRR+A Sbjct: 59 ADLAVHSLKDVPMALPDGFALTAIMEREDPRDAFVSNDYASLDALPAGAVVGTSSLRREA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 +L + V+ RG ++TRL KL+ AI+LA AG+KRL E I+ ++++ED PP Sbjct: 119 MLRARYPHLDVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARIRTLIDVEDSPP 178 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + GQGA+ IE + + ++ T +V ER L GSC+ +A A + Sbjct: 179 AAGQGALGIEIAAHRTDVAAWLAPLHDPKTALAVEAERMVSRALGGSCEVPLAAHAVWRA 238 Query: 257 STLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNKNVFN 306 LY G V +DG+ G DA+ +GR + + ++ N Sbjct: 239 GELYLTGRVSTTDGQRVLTAEECGAVMTIADALALGRAVSDELEAQGALDIVN 291 >gi|255949632|ref|XP_002565583.1| Pc22g16690 [Penicillium chrysogenum Wisconsin 54-1255] gi|211592600|emb|CAP98957.1| Pc22g16690 [Penicillium chrysogenum Wisconsin 54-1255] Length = 330 Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats. Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 13/312 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA+ A R SL + P + I L T GDR L + G K L+ Sbjct: 10 PLRIGTRRSNLAVVQAEGIRDSLKRI--APERSYEIETLRTLGDRDQLTALYDFGAKSLW 67 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T E+E+KL+SGE+D VH KDMPT L +++A PR+D RD I S+K+L Sbjct: 68 TTELEEKLVSGELDVIVHCLKDMPTTLPDTCELAAIPPRDDPRDALIVKSSLPYTSIKEL 127 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIKRL 179 +V+GTSS+RR A L R + + RG +ETRL KL+N ++ ++++ AG++R+ Sbjct: 128 PKGAVVGTSSVRRSAQLRRLYPYLRFANIRGNVETRLAKLDNPASEYTCMVMSAAGLERV 187 Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 ++ I + L +D + GQGA+ +E + K QEL+ + + + ER+ + Sbjct: 188 GRKFRINQYLCSKDGGIFHAVGQGALGLEIRKGDTKTQELLDQLADRKSTLACLAERSLM 247 Query: 238 AELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAA 293 L+G C I + L +V++ DG E S +A +G+ A Sbjct: 248 RTLEGGCSVPIGVETEWIRSDVLKITALVVSLDGSESVEDSLEARVQTVDEATELGKKIA 307 Query: 294 QYIRFISNKNVF 305 + + + Sbjct: 308 ARLVKAGAEAIL 319 >gi|302870086|ref|YP_003838723.1| porphobilinogen deaminase [Micromonospora aurantiaca ATCC 27029] gi|315503637|ref|YP_004082524.1| porphobilinogen deaminase [Micromonospora sp. L5] gi|302572945|gb|ADL49147.1| porphobilinogen deaminase [Micromonospora aurantiaca ATCC 27029] gi|315410256|gb|ADU08373.1| porphobilinogen deaminase [Micromonospora sp. L5] Length = 328 Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats. Identities = 95/314 (30%), Positives = 157/314 (50%), Gaps = 17/314 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + +L P + ++ + T GDR + + G G+F Sbjct: 4 PLRLGTRGSALAMAQSGHVAEALTAATGRP---VELVEVVTAGDR--STAPVQRLGVGVF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L +GEID AVHS KD+PT GL ++A PR+D RD ++ ++L +L Sbjct: 59 VSALRDALTAGEIDFAVHSYKDLPTAAAPGLHVAAVPPRQDPRDALVATNGRTLAELPPG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRLKKE 182 + +GT +LRR A L + V RG ++TRL ++ + A++LA AG+ R+ + Sbjct: 119 ARVGTGALRRIAQLHALGMQLEVSPIRGNVDTRLGRVLGPDADLDAVVLARAGLNRIGRA 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+P QGA+ +E ++ EL+ +++H + ++ ERA LA L+ Sbjct: 179 DVITETLDPMLMLPAPAQGALAVECRADDQDVIELLALLDHAPSRAAITAERALLATLEA 238 Query: 243 SCKSAIAGFAYCKGS----------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292 C + +A +A +Y G V++ DG +SR G DA IG+ Sbjct: 239 GCSAPVAAYAVLAEGEPTDEGDVNQEIYLRGAVISPDGTRDLRLSRTGTPADAAEIGKAL 298 Query: 293 AQYIRFISNKNVFN 306 A + + ++ Sbjct: 299 AAELLELGADSILG 312 >gi|325286453|ref|YP_004262243.1| porphobilinogen deaminase [Cellulophaga lytica DSM 7489] gi|324321907|gb|ADY29372.1| porphobilinogen deaminase [Cellulophaga lytica DSM 7489] Length = 525 Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats. Identities = 104/307 (33%), Positives = 154/307 (50%), Gaps = 9/307 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A +S L + I+ + + GD ++ L E+G Sbjct: 1 MS-KIIRIGTRDSELALYQANRVKSELETL----GFKTKIVAVKSAGDLELDKPLYELGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT ++ ++ GEID AVHS KD+PT L KG+ +A L R +++D + + Sbjct: 56 TGIFTRTLDIAMLKGEIDIAVHSLKDVPTVLPKGIVQAAVLERGNVKDTLVYKNNEEFLG 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKRL 179 VI TSSLRRKA L V D RG + TRL KL +++ + + A AGI RL Sbjct: 116 ARDG-VIATSSLRRKAQWLNRYPTHKVEDIRGNVNTRLQKLEDSETWNGAIFAAAGIGRL 174 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 +E +N++ P+PGQGAI + + + + + INH +T ER FL Sbjct: 175 NL--RPEEAVNLDWMIPAPGQGAIMVTAKEDEEEILAICEEINHRETEICTTIERTFLNR 232 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C + I AY K + F ++L+ DG EV R D N+ +AA+++ Sbjct: 233 LEGGCTAPIGALAYIKSEQVIFRAVLLSPDGTKKIEVDRLVKLGDHNNLAIEAAEHVLER 292 Query: 300 SNKNVFN 306 K + Sbjct: 293 GGKYIME 299 >gi|169784578|ref|XP_001826750.1| porphobilinogen deaminase [Aspergillus oryzae RIB40] gi|83775497|dbj|BAE65617.1| unnamed protein product [Aspergillus oryzae] Length = 333 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 97/317 (30%), Positives = 155/317 (48%), Gaps = 15/317 (4%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RIGTR S LA+ A R SL P + I L T GD+ + L G K Sbjct: 8 AQPPLRIGTRRSKLAIVQAEGIRDSLQK--TAPNRSYEIETLHTLGDKDKSTALYNFGAK 65 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 L+T E+E+KL SG++D VH KDMPT L + ++A R+D RD + SL Sbjct: 66 SLWTSELEEKLTSGQLDVIVHCLKDMPTTLPESCDLAAITLRDDPRDALVIKAGLPYTSL 125 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176 + L +V+GTSS+RR A LLR + + RG +ETRL K++N ++ ++++ AG+ Sbjct: 126 QTLPEGAVVGTSSVRRSAQLLRLYPHLRFANLRGNVETRLAKVDNPESEYTCMIMSAAGL 185 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 +R+ + I + + +D + GQGA+ +ET + QEL+ + E + + ER Sbjct: 186 ERIGLKHRINQYIGSKDGGILHAVGQGALGLETRKGDSSTQELLNKLVDEKSTLACLAER 245 Query: 235 AFLAELDGSCKSAIAGFAYCKGST---LYFYGIVLASDGKIFHEVSRNG---NRCDAINI 288 A L L+G C I + L IV++ DG + + + + +A Sbjct: 246 ALLRTLEGGCSVPIGVETEWVDQSEYFLRMRAIVVSLDGTQSVQDTIDATVRTKDEATVF 305 Query: 289 GRDAAQYIRFISNKNVF 305 G++ A + + Sbjct: 306 GKELATRLVTAGADAIL 322 >gi|310794330|gb|EFQ29791.1| porphobilinogen deaminase [Glomerella graminicola M1.001] Length = 347 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 101/317 (31%), Positives = 144/317 (45%), Gaps = 18/317 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LA+ A L P + I + T GD+ L GGKGL+T Sbjct: 13 IHVGTRKSALAMKQAEIVVEGLSKAR--PDVSFEIHGMQTLGDKDQITALYNFGGKGLWT 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-------QSL 118 E+E KL + EID VHS KDMPT L G + RED RDV + ++L Sbjct: 71 SELEAKLAAKEIDIIVHSLKDMPTTLPDGCTLGCVTKREDPRDVVVFKAGLAEKHGWKTL 130 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176 DL SVIGTSS+RR A L R + D RG IETRL K ++ AI+LA AG+ Sbjct: 131 ADLPEGSVIGTSSVRRIAQLKRRYPGLKFADVRGNIETRLRKCDDPEGPFSAIILAAAGL 190 Query: 177 KRLKKEKVIKEILNIEDF--PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R+ I + L E+ + GQGA+ IE + + ++K + + T + ER Sbjct: 191 LRMDYGARISQFLESENSGTLHAVGQGALGIEARTGDERVLAVIKELEDKPTMLACFAER 250 Query: 235 AFLAELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIG 289 + + L+G C I G L V+ +DG + V +A + G Sbjct: 251 SVMRTLEGGCSVPIGVETTWVEDGKKLRLKATVVHADGTRGVDTEMVEVITTAEEADDFG 310 Query: 290 RDAAQYIRFISNKNVFN 306 + AQ + + + + Sbjct: 311 KVVAQALVDRGAQQILD 327 >gi|297197348|ref|ZP_06914745.1| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083] gi|297146690|gb|EDY58887.2| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083] Length = 314 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 101/304 (33%), Positives = 151/304 (49%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA RS L ++ P ++P+ T GD+ L+++ GKG FT Sbjct: 10 IRIVSRDSPMALAQVERVRSELTALY--PGVRTEVVPVRTTGDKWMGD-LSKVEGKGAFT 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +A+L R+DIRD I +L +L Sbjct: 67 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTTFAAFLKRDDIRDALIHPGGLTLDELPE 126 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSS+RR A L + + FRG RL KL +A A+LLA AG++R+ ++ Sbjct: 127 GTRVGTSSVRRVAQLAATHPHLECVPFRGNANRRLAKLEAGEADALLLAVAGLERIGRQD 186 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI E+L+ E P G G + ++ + + + V + DT+ ER FL L G Sbjct: 187 VISEVLSPETMMPPIGAGILGLQCREGDTELIDAVSALGDPDTYREATAERMFLHVLQGH 246 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG+A G L V DGK R D +G A + + Sbjct: 247 CNSPIAGYARVDHGDELSLRACVFTPDGKTRLNAHEWAGRLDPATLGTSVAVALLRQGAR 306 Query: 303 NVFN 306 + + Sbjct: 307 EIID 310 >gi|50291395|ref|XP_448130.1| hypothetical protein [Candida glabrata CBS 138] gi|55976396|sp|Q6FNR4|HEM3_CANGA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|49527441|emb|CAG61081.1| unnamed protein product [Candida glabrata] Length = 329 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 96/321 (29%), Positives = 145/321 (45%), Gaps = 17/321 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ IG R S LA+ + R + K P ++ + L T GD+I + L GG Sbjct: 1 MTRESINIGGRRSKLAVVQSNHVRDLVQA--KFPQYDCTVFTLQTLGDQIQFKPLYSFGG 58 Query: 61 KGLFTEEIEKKL----ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116 K L+T+E+E L +D VHS KDMPT L G ++ R D D + Sbjct: 59 KALWTKELEDYLYCEDQEKRLDLIVHSLKDMPTLLPDGFELGCVTKRVDPTDCIVMPRGS 118 Query: 117 S---LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILL 171 L DL +V+GTSS+RR A L R + RG I TRL KL++ ++L Sbjct: 119 PHRCLADLPEGAVVGTSSVRRSAQLKRKFPHLKYQSVRGNIHTRLEKLDDPEGPFQCLVL 178 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ R+ E I + L+ + + GQGA+ IE + K +++ I ++ Sbjct: 179 ASAGLVRMGLEDRITQRLHSDIMYHAVGQGALGIEIRQGDKKILQILDEIADLESTVCCL 238 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFH----EVSRNGNRCDA 285 ER+ + L+G C I + T L GIV+ +G + EV N R D+ Sbjct: 239 AERSLMRTLEGGCSVPIGVESSYDHKTKKLLLKGIVVNVEGTMAIEDQQEVVVNDIREDS 298 Query: 286 INIGRDAAQYIRFISNKNVFN 306 I G A + K + + Sbjct: 299 IKCGVLLAHKMIKDGAKKILD 319 >gi|257452372|ref|ZP_05617671.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_5R] gi|317058915|ref|ZP_07923400.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_5R] gi|313684591|gb|EFS21426.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_5R] Length = 299 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 106/301 (35%), Positives = 164/301 (54%), Gaps = 6/301 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL--TEI 58 M K+ +G+R S LALA + L H P + I + T+GD+ + ++ Sbjct: 1 MSKQQIILGSRGSILALAQTNWVKEQLEKYH--PELSFSIQIIETQGDKDLHSHFGNSQS 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 K FT+EIEK L+ GEID AVHS KD+P+ GL A RED+RDV IS + + L Sbjct: 59 SLKSFFTKEIEKSLLEGEIDIAVHSMKDVPSVSPAGLICGAIPIREDVRDVLISRSGKPL 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L ++IGTSSLRR + + R D+ + RG I TRL KL + AI+LA AG+KR Sbjct: 119 AELPQGAIIGTSSLRRIQNIKKIRPDLEIKALRGNIHTRLRKLEEEQYDAIILAAAGLKR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 +K E+ I E L+ FPP+P QGA+ I+ + + Q++++ I++++ + ER F Sbjct: 179 VKLEEKITEYLDPTVFPPAPAQGALYIQCREEDIEVQKILQSIHNKNLEKVLVVEREFSK 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 DG C + + ++ +G TL F+ + + + ++ N +I R AAQ I Sbjct: 239 IFDGGCHTPMGCYSNLQGDTLEFFAMYSHENKR--YQTKVVENLSKGKDIARMAAQKIEK 296 Query: 299 I 299 + Sbjct: 297 M 297 >gi|226948193|ref|YP_002803284.1| hydroxymethylbilane synthase [Clostridium botulinum A2 str. Kyoto] gi|254800244|sp|C1FVB9|HEM3_CLOBJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226840754|gb|ACO83420.1| hydroxymethylbilane synthase [Clostridium botulinum A2 str. Kyoto] Length = 290 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 103/293 (35%), Positives = 153/293 (52%), Gaps = 6/293 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LA L H + + T GD+I +L +IGGKGLF Sbjct: 3 FVIATRRSKLAQVQTEIIIDLLNKKH---DIECEKLLIETVGDKILEVSLDKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL + Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 S I +A K + ++ GI + + G + +G A++I Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGISLAEHILK 289 >gi|154505786|ref|ZP_02042524.1| hypothetical protein RUMGNA_03326 [Ruminococcus gnavus ATCC 29149] gi|153793804|gb|EDN76224.1| hypothetical protein RUMGNA_03326 [Ruminococcus gnavus ATCC 29149] Length = 295 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 102/300 (34%), Positives = 156/300 (52%), Gaps = 6/300 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RIG+R S LA+ + + P + I+ + T GDRI +R+L +IGGKG Sbjct: 2 KTVIRIGSRESRLAVTQTEIIKGQIEA--HFPHIRVEIVTMKTTGDRILDRSLEQIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+++ L G +D +VHS KDMP + + L I AY RED RDV I Q+ + Sbjct: 60 LFVKELDQALRKGRVDLSVHSLKDMPMDIPEDLPILAYSKREDPRDVLIFRQGQT--ESI 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +IGTSS RR+ L R D RG ++TRL KL A +LA AG+KRL + Sbjct: 118 SGGMIGTSSKRRRLQLERLYPDCHFQGIRGNVQTRLRKLEEEGFCATVLAAAGLKRLGMD 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + E+ P+ GQG + ++ + QEL++V+N + + ERAF+ L+G Sbjct: 178 SCIGRYFSCEEMIPAAGQGILAVQARAG--EYQELLEVLNDPRSEAAAKAERAFVKVLNG 235 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S +A +A +GS + G+ + + +GN+ +A +G A ++ K Sbjct: 236 GCTSPVAAYAEIRGSKCHITGLYWRESDENWFVEKTSGNKKEAELLGETLAHNMQKKYGK 295 >gi|73666979|ref|YP_302995.1| porphobilinogen deaminase [Ehrlichia canis str. Jake] gi|123773372|sp|Q3YSA8|HEM3_EHRCJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|72394120|gb|AAZ68397.1| Porphobilinogen deaminase [Ehrlichia canis str. Jake] Length = 298 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 108/292 (36%), Positives = 157/292 (53%), Gaps = 5/292 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LALA E + L P NI ++ + T GD + IGGKGLF Sbjct: 3 IRIGTRGSVLALAQTLEVTNLL--NRYFPEINIQVVKIKTSGDINNKVPINTIGGKGLFI 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G++D AVHS KD+P GL I L R DVF+S QS+K L +++ Sbjct: 61 KEIEEALLIGKVDLAVHSVKDIPAFYCDGLIIPCVLKRSSPYDVFVSSKYQSIKSLPINA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS+RRK L R D+ VI RG I+TR+ K + + I+LA AG+ R+ K VI Sbjct: 121 TVGTSSIRRKVQLNYLRPDLQVIPVRGNIDTRILKSDIGEFDGIVLAEAGLIRINKCNVI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 KE+L+ + + GQGAIC++ ++ +KV+N ++ V ER+FL ++GSC Sbjct: 181 KEVLDSKIMLSAVGQGAICVQCRADDYNIINKIKVLNCHKSYVCVIAERSFLKTINGSCD 240 Query: 246 SAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + +A A Y T+Y ++ K C+A G D + + Sbjct: 241 TPLAALAQYVDSDTIYMSCMLSNE--KEMVFSDCYFKECNAEESGIDMGKKL 290 >gi|86141058|ref|ZP_01059617.1| porphobilinogen deaminase [Leeuwenhoekiella blandensis MED217] gi|85833000|gb|EAQ51449.1| porphobilinogen deaminase [Leeuwenhoekiella blandensis MED217] Length = 305 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 93/303 (30%), Positives = 151/303 (49%), Gaps = 6/303 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LAL A + L ++ + +I + + GD I ++ L E+G G+ Sbjct: 3 KTIRIGTRDSELALWQAHTVQDQLENL----GYKTELISVKSTGDLILDKPLYELGITGI 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ ++ +I+G++D AVHS KD+PT+L G+ A LPR D+F+ ++ D Sbjct: 59 FTKTLDVAMINGDVDIAVHSMKDVPTQLPNGIVQGAVLPRAATEDIFVFKKDKNATDFTK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 I T SLRRKA L V+D RG + TRL K+ +N + A AG++R+ + Sbjct: 119 SVTIATGSLRRKAQWLNKYPKHQVVDLRGNVNTRLQKVADNDWAGAVFAKAGLERINLKP 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 E+L + P+P QGA+ I N+ +E +N D + ER FL +L+G Sbjct: 179 ENHEVL--DWMIPAPAQGAMVIAVMDNDAFCKEACAKLNDADAALTTKVEREFLRKLEGG 236 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C + I A + ++F+G + + DG E+ + + ++ G A I + Sbjct: 237 CTAPIGAIAKIEDDHIHFHGALFSLDGTQKLEIKESIPVSECLDFGALCALKILEEGGRE 296 Query: 304 VFN 306 + Sbjct: 297 LME 299 >gi|153939780|ref|YP_001390273.1| porphobilinogen deaminase [Clostridium botulinum F str. Langeland] gi|166201504|sp|A7GBW3|HEM3_CLOBL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|152935676|gb|ABS41174.1| hydroxymethylbilane synthase [Clostridium botulinum F str. Langeland] gi|295318368|gb|ADF98745.1| hydroxymethylbilane synthase [Clostridium botulinum F str. 230613] Length = 290 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 104/293 (35%), Positives = 153/293 (52%), Gaps = 6/293 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LA L H + + T GD+I +L +IGGKGLF Sbjct: 3 FIIATRRSKLAQVQTEIIIDLLNKKH---DIECEKLLIETVGDKILEVSLDKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL + Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPKREDVRDAFISLDNIKFKDLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ E +I Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLEHLI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 S I +A K + ++ GI + + G + +G A++I Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGIALAEHILK 289 >gi|51473654|ref|YP_067411.1| porphobilinogen deaminase [Rickettsia typhi str. Wilmington] gi|55976371|sp|Q68WR3|HEM3_RICTY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|51459966|gb|AAU03929.1| Porphobilinogen deaminase [Rickettsia typhi str. Wilmington] Length = 299 Score = 312 bits (800), Expect = 5e-83, Method: Composition-based stats. Identities = 102/297 (34%), Positives = 158/297 (53%), Gaps = 6/297 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL + + P N I+P+ T GD I N+ L +IGGK LF Sbjct: 5 IRIGTRNSTLALIQTNLVIAQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ +ID AVHS KD+P ++ L I+A L RED RDV + +S++ L ++ Sbjct: 63 KEIEQALLDKKIDLAVHSLKDIPGRIPVDLVIAAVLEREDPRDVLVCLNYKSIETLPQNA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 VIG+S++RRKA + + R D+++ FRG +++R+ KL + A +L+YAG+KRL K Sbjct: 123 VIGSSAVRRKAFIKKIRPDLNIKVFRGNVDSRIKKLMTGEVDATILSYAGLKRLNAFNKK 182 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ P GQG I +E ++ + INH T++ + ERAFL LD +C Sbjct: 183 YCHLIEYSQILPCVGQGVIAVEIRKDDNAMFNICNQINHIPTFELIKPERAFLEHLDANC 242 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASD-GKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + I ++ Y + ++ D KI + N + G AA+ + Sbjct: 243 STPIGAYSQYLDAYNIQTDFMLGKLDCNKIIFQTEIT-NINTSRECGIKAAKMMLAQ 298 >gi|306819824|ref|ZP_07453478.1| hydroxymethylbilane synthase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304552071|gb|EFM40008.1| hydroxymethylbilane synthase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 301 Score = 312 bits (800), Expect = 5e-83, Method: Composition-based stats. Identities = 101/306 (33%), Positives = 155/306 (50%), Gaps = 7/306 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ + RI R S LAL L +K N I+ + T GD+ L+EIG Sbjct: 1 MKMQTVRIAGRKSKLALVQTQRVIDLLKQKYK--DVNFEIVTVETLGDKNLKEKLSEIGT 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLK 119 KGLFT EIE+ L++G +D AVHS KDMPT ++ L+I AY+ RE +DV + + +S+K Sbjct: 59 KGLFTFEIEQMLLNGSVDMAVHSLKDMPTDFIRDLKIGAYIKRESNKDVIVFNKDYKSVK 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL ++ IGTSSLRR+ + + D V + RG I TRL ++ + AI+LA + RL Sbjct: 119 DLPKNAKIGTSSLRREVQIKKLGKDFEVANIRGNIHTRLKRMKDENFDAIILAKVALTRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + F + GQG IC++ +N K +++++ +N +T V ER FL Sbjct: 179 NLQDELVFEELP--FVSAAGQGCICVQVKKDNKKIEKMLEFLNDAETQSCVMAEREFLHT 236 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + G C + + + G Y V + DGK + D N+G+ AQ + Sbjct: 237 IGGGCHTPVGAYCEKIGQIYRIYAFVSSLDGKKYLSCEI--KSKDTENLGKQTAQRLIAK 294 Query: 300 SNKNVF 305 + Sbjct: 295 GADKIV 300 >gi|254382514|ref|ZP_04997873.1| porphobilinogen deaminase 1 [Streptomyces sp. Mg1] gi|194341418|gb|EDX22384.1| porphobilinogen deaminase 1 [Streptomyces sp. Mg1] Length = 322 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 17/314 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P R+GTR S LA++ + ++ + P + ++ ++T GD ++ L +IGG G+ Sbjct: 7 QPLRLGTRRSKLAMSQSGHVADAVRAITGRP---VELVEITTYGD-VSREHLAQIGGTGV 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F + L+ GEID AVHS KD+PT L I+A PRED RD ++ + + L Sbjct: 63 FVTALRDALLRGEIDFAVHSLKDLPTTQPDDLVIAAMPPREDPRDALVARDGLTFEQLPD 122 Query: 124 HSVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 + +GT S RR A L I + RG ++TR+ + N + A++LA AG+ R+ Sbjct: 123 GARVGTGSPRRMAQLNHAARALGKRIETVAIRGNVDTRIGFVRNGELDAVVLAAAGLNRI 182 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + L+++ P+PGQGA+ +E ++ + + ++ T +V ER+ LA Sbjct: 183 GRSDEATDFLSVDSVLPAPGQGALAVECLASDAELIAALAELDDPHTRAAVTAERSLLAA 242 Query: 240 LDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGR 290 L+ C + + A + G+V DG ++S G DA+ +GR Sbjct: 243 LEAGCSAPVGALADLLADGQIVNEMRLRGVVGTLDGTTLVQLSTTGPVPQSYDDAMALGR 302 Query: 291 DAAQYIRFISNKNV 304 + A + + Sbjct: 303 ELADEMLAKGAAGL 316 >gi|157825828|ref|YP_001493548.1| porphobilinogen deaminase [Rickettsia akari str. Hartford] gi|166217781|sp|A8GNR5|HEM3_RICAH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157799786|gb|ABV75040.1| porphobilinogen deaminase [Rickettsia akari str. Hartford] Length = 301 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 109/296 (36%), Positives = 158/296 (53%), Gaps = 4/296 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLAL + P N I+P+ T GD I N+ L +IGGK LF Sbjct: 5 IRIGTRNSPLALIQTNLVIQQIKQF--FPDINCAIVPIITSGDLIQNKPLYDIGGKALFL 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ +ID AVHS KD+P ++ + L ISA L RED RDVF+ +S+K+L HS Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEELVISAVLEREDPRDVFVCLNYKSIKELPQHS 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAYAG+KRL Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKVTIFRGNVDSRIKKLMTGEVDATILAYAGLKRLGAFNPE 182 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ P GQG I +E N+ E+ INH T + + ERAFL LD +C Sbjct: 183 YCHLIEYSHMLPCVGQGVIAVEIRQNDNSMLEICNQINHLPTCELIKPERAFLEYLDANC 242 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ I ++ Y + ++ D + N + G AA+ + Sbjct: 243 RTPIGTYSQYLDADNIQTDFMLGNPDCSKITFHTEITNIKTSKEGGIKAAKMMLNQ 298 >gi|157803668|ref|YP_001492217.1| porphobilinogen deaminase [Rickettsia canadensis str. McKiel] gi|166217783|sp|A8EYJ9|HEM3_RICCK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157784931|gb|ABV73432.1| porphobilinogen deaminase [Rickettsia canadensis str. McKiel] Length = 301 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 104/295 (35%), Positives = 162/295 (54%), Gaps = 4/295 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLAL + +P N I+P++T GD I N+ L +IGGK LF Sbjct: 5 IRIGTRKSPLALIQTNLVIQQIKQF--VPDINYKIVPITTSGDLIQNKPLYDIGGKALFL 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++ Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEDLIIAAVLEREDPRDVFVCLKYKSIEELPQNA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 +IG+S++RRK + + RSD+ V FRG +++R+ KL N + A +LAYAG+KRL Sbjct: 123 IIGSSAVRRKTFIEKIRSDLKVTVFRGNVDSRIKKLMNGEVDATILAYAGLKRLNAFNPQ 182 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ P GQG I +E ++ E INH T++ + ERAFL LD +C Sbjct: 183 YCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLETCNQINHLTTFELIKPERAFLEYLDANC 242 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 ++ IA ++ Y + ++ + + N + G AA+ + Sbjct: 243 RTPIAAYSKYLDKDNIETDFMLGNLESSKITFHTETTNIKTSKEAGIKAAKIMLS 297 >gi|187778036|ref|ZP_02994509.1| hypothetical protein CLOSPO_01628 [Clostridium sporogenes ATCC 15579] gi|187774964|gb|EDU38766.1| hypothetical protein CLOSPO_01628 [Clostridium sporogenes ATCC 15579] Length = 295 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 104/293 (35%), Positives = 154/293 (52%), Gaps = 6/293 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LA SL H + + T GD+I +L +IGGKGLF Sbjct: 8 FVIATRRSKLAQVQTEIIIDSLNKKH---DIECEKLLIETIGDKILEVSLDKIGGKGLFV 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL + Sbjct: 65 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLREGA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I Sbjct: 125 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C Sbjct: 185 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 S I +A K + ++ GI + + G + +G A++I Sbjct: 244 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGIALAEHILK 294 >gi|297172436|gb|ADI23410.1| porphobilinogen deaminase [uncultured gamma proteobacterium HF0770_28K04] Length = 311 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 104/300 (34%), Positives = 155/300 (51%), Gaps = 4/300 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 F +GTR S L+LA S L + P I ++T GD T R L I KG+F Sbjct: 2 TFLVGTRGSKLSLAQTNWVISELQK--QNPGSEFEIKTITTNGDTDT-RALFTIDQKGIF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EI+K + +ID AVHS KD+P+ + K L I+ RE DV I+ +LK + L+ Sbjct: 59 EKEIDKAVAEKQIDFAVHSLKDVPSDISKSLTIACVPKRESANDVLITKDGFNLKTIPLN 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR + R R D+ V RG IETR+NK+ + K AI+LA AGI RL V Sbjct: 119 AVVGTSSLRRAVQVSRIRPDVVVKPVRGNIETRINKVIDGKFDAIILAEAGISRLGL-DV 177 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 +L+ +DFPPSPGQGA+ I ++ K ++K I + + + ERA ++ C Sbjct: 178 KHSVLSTKDFPPSPGQGALAIVCRADDDKTISMLKKIEDKKSRIEIESERALSDYVESGC 237 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + + A L + DGK + + G+ N+G+ + ++ I + Sbjct: 238 RFPVGALAIANSGMLKLTVTAYSVDGKKSITIEKTGDIDKPRNLGQGVGEELQKIGIAEI 297 >gi|115399989|ref|XP_001215583.1| porphobilinogen deaminase [Aspergillus terreus NIH2624] gi|114191249|gb|EAU32949.1| porphobilinogen deaminase [Aspergillus terreus NIH2624] Length = 337 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 100/321 (31%), Positives = 151/321 (47%), Gaps = 19/321 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + P RIGTR S LA+ A R SL V P + I+ L T GDR L G K Sbjct: 9 QPPLRIGTRRSNLAMVQAEGIRDSLQKV--APDRSYEIVALRTLGDRDKQTALYNFGAKN 66 Query: 63 LFTEEIEKKLISGEIDCAVHSA------KDMPTKLLKGLQISAYLPREDIRDVFISH--- 113 L+T E+E+KL SGE+D VH DMPT L Q++A PR+D RD I Sbjct: 67 LWTTELEEKLTSGELDVIVHCLKDQLTAPDMPTTLPDTCQLAAIPPRDDPRDALIVKASL 126 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILL 171 SL+ L +V+GTSS+RR A L R + + RG +ETRL K+++ ++ +++ Sbjct: 127 PYTSLQSLPAGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPESEYTCMIM 186 Query: 172 AYAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 + AG++R+ + I + L D + GQGA+ +E + + EL+ + + + Sbjct: 187 SAAGLERVGLQYRINQYLGSRDGGILHAVGQGALGLEIRKGDAQMLELLGQLADRKSTLA 246 Query: 230 VNCERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRN---GNRCDA 285 ER+ + L+G C I L + IV++ DG E S G +A Sbjct: 247 CLAERSLMKTLEGGCSVPIGVETEWLSSGDLRMHSIVVSLDGTQCVEDSITSKVGTDDEA 306 Query: 286 INIGRDAAQYIRFISNKNVFN 306 G + A + + N Sbjct: 307 AAFGEELAARLVKAGAGQILN 327 >gi|323353345|ref|ZP_08087878.1| hydroxymethylbilane synthase [Streptococcus sanguinis VMC66] gi|322121291|gb|EFX93054.1| hydroxymethylbilane synthase [Streptococcus sanguinis VMC66] Length = 306 Score = 312 bits (799), Expect = 6e-83, Method: Composition-based stats. Identities = 109/302 (36%), Positives = 161/302 (53%), Gaps = 9/302 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKAIH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L +L Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLANLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + L P+ QGA+ +E + + + L+ + E T V ERA LA+ Sbjct: 180 DQSRLHIQTLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA FA G ++ DG+ VS G D + A + + Sbjct: 240 MNADCTFPIAAFAQKNGQGYQLEAMLAKEDGQCIF-VSLQG--QDGQELAEQAVRQLADK 296 Query: 300 SN 301 Sbjct: 297 GA 298 >gi|297192867|ref|ZP_06910265.1| porphobilinogen deaminase domain-containing protein [Streptomyces pristinaespiralis ATCC 25486] gi|297151527|gb|EFH31219.1| porphobilinogen deaminase domain-containing protein [Streptomyces pristinaespiralis ATCC 25486] Length = 319 Score = 312 bits (799), Expect = 6e-83, Method: Composition-based stats. Identities = 90/317 (28%), Positives = 155/317 (48%), Gaps = 17/317 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ R+GTR S LA+A + + ++ + + ++ ++T GD ++ L +IGG Sbjct: 1 MTERALRLGTRRSKLAMAQSGQVAEAVRRLS---GRAVELVEITTYGD-VSREHLAQIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L GE+D AVHS KD+PT L ++A RED RDV I+ S + Sbjct: 57 TGVFVAALREALARGEVDFAVHSLKDLPTTQPDELALAAVPKREDPRDVLIARDGLSFER 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + IGT S RR A L + + RG ++TR+ + N + A++LA AG+ Sbjct: 117 LPNGARIGTGSPRRMAQLNAYARTHGLTIETVPIRGNVDTRIGFVRNGELDAVVLAAAGL 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ + + + L+++ P+PGQGA+ IE ++ + ++ T +V ER+ Sbjct: 177 NRIGRTDEVTDFLSVDFVLPAPGQGALAIECSASDADLVATLAGLDDPHTRVAVTAERSL 236 Query: 237 LAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAIN 287 LA L+ C + + A G + G+V +DG ++S G DA Sbjct: 237 LAALEAGCSAPVGALADLLGDGQEFTEMRLRGVVGTTDGSSLVQLSTTGPVPTSHDDAAA 296 Query: 288 IGRDAAQYIRFISNKNV 304 +GR+ A + + Sbjct: 297 LGRELADEMLAKGAAGL 313 >gi|324990199|gb|EGC22137.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK353] Length = 306 Score = 312 bits (799), Expect = 6e-83, Method: Composition-based stats. Identities = 110/302 (36%), Positives = 162/302 (53%), Gaps = 9/302 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 120 KGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + L P+ QGA+ +E + + + L+ + E T V ERA LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA FA G ++ DG+ VS G D + A + + Sbjct: 240 MNADCTFPIAAFAQKNGQNHQLEAMLAKEDGQCVF-VSLQG--QDGQELAEQAVRQLADK 296 Query: 300 SN 301 Sbjct: 297 GA 298 >gi|148378912|ref|YP_001253453.1| porphobilinogen deaminase [Clostridium botulinum A str. ATCC 3502] gi|153934281|ref|YP_001383295.1| porphobilinogen deaminase [Clostridium botulinum A str. ATCC 19397] gi|153936114|ref|YP_001386843.1| porphobilinogen deaminase [Clostridium botulinum A str. Hall] gi|166201502|sp|A7FSG8|HEM3_CLOB1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166201503|sp|A5I0B2|HEM3_CLOBH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|148288396|emb|CAL82473.1| porphobilinogen deaminase [Clostridium botulinum A str. ATCC 3502] gi|152930325|gb|ABS35825.1| porphobilinogen deaminase [Clostridium botulinum A str. ATCC 19397] gi|152932028|gb|ABS37527.1| hydroxymethylbilane synthase [Clostridium botulinum A str. Hall] Length = 290 Score = 312 bits (799), Expect = 6e-83, Method: Composition-based stats. Identities = 102/293 (34%), Positives = 153/293 (52%), Gaps = 6/293 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LA L H + + T GD+I +L +IGGKGLF Sbjct: 3 FVIATRRSKLAQVQTEIIIDLLNKKH---DIECEKLLIETVGDKILEVSLDKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL + Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L R D+ ++ RG ++TR+ K+ ++LA AG+KR+ + +I Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGVILAVAGLKRVNLDHLI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 S I +A K + ++ GI + + G + +G A++I Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGISLAEHILK 289 >gi|315925350|ref|ZP_07921561.1| hydroxymethylbilane synthase [Pseudoramibacter alactolyticus ATCC 23263] gi|315621251|gb|EFV01221.1| hydroxymethylbilane synthase [Pseudoramibacter alactolyticus ATCC 23263] Length = 309 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 103/300 (34%), Positives = 147/300 (49%), Gaps = 6/300 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +G+R S LA+ L H P + ++TKGDR ++ L IG KGL Sbjct: 2 KKIVVGSRGSKLAVTQTNWLIERLAAAH--PDIAFELKIITTKGDRNQHQALDAIGDKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKDLA 122 FT E+E +L+SGEI AVHS KDMP+ L +GL ++ RED DV ++ SL DL Sbjct: 60 FTAELEAELLSGEIQMAVHSMKDMPSALPEGLCLTVPPMREDPADVLVTPHGAASLDDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIG+ S RR L R D+ + RG I+TR+ KL + I+LA AG++RL Sbjct: 120 EGAVIGSGSKRRVFQLKALRPDLQTVGIRGNIDTRIRKLFDEHLDGIVLAAAGMRRLNVY 179 Query: 183 KVIKEILNI---EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 L F P+P QG + +E +N + + L+ I+ E + ER+FL Sbjct: 180 DAADYHLVPLLPPAFVPAPAQGILAVEIREDNAEVKALMAAISDETARVQMAAERSFLTA 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 LDG C I + G + YG+ G + S G DA +G A+ +R Sbjct: 240 LDGDCHLPIGAYCEAAGDAITLYGLYGDEAGTRLVKGSAAGRAADAERLGAQLAEQLRKA 299 >gi|99034622|ref|ZP_01314577.1| hypothetical protein Wendoof_01000608 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 302 Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats. Identities = 112/295 (37%), Positives = 162/295 (54%), Gaps = 8/295 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LA+A A E + L+D P +I I+ + T GD+ N L EIGGKGLF Sbjct: 13 VKIGTRGSKLAVAQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFI 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE +L+ ID AVHS KDMP GL I L R D FISH SL+ L + Sbjct: 71 KEIETELLENNIDMAVHSLKDMPAFFSGGLTIPCVLERLSSCDAFISHKHNSLESLPQQA 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 I TSS+RRK LL R D++++ RG + TR L N I+LA AG+ RL+K +I Sbjct: 131 TIATSSIRRKVQLLNVRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLI 187 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L + + GQGA+CI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC Sbjct: 188 TEVLPPKVMLSAVGQGAVCIQCRRNDVKIIDLLEKINNNMSFIGVKSERSFMKTVNGSCF 247 Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + +A A + L+ ++ + GK + R DA +G DA ++ Sbjct: 248 TPLAALAEYVSENMLHLRCMLAS--GKNIYFTERTSFIEDAEKMGMDAGLELKSK 300 >gi|170757497|ref|YP_001780553.1| porphobilinogen deaminase [Clostridium botulinum B1 str. Okra] gi|229836107|sp|B1IHD1|HEM3_CLOBK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|169122709|gb|ACA46545.1| porphobilinogen deaminase [Clostridium botulinum B1 str. Okra] Length = 290 Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats. Identities = 103/293 (35%), Positives = 153/293 (52%), Gaps = 6/293 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LA L H + + T GD+I +L +IGGKGLF Sbjct: 3 FVIATRRSKLAQVQTEIIIDLLNKKH---DIECEKLLIETVGDKILEVSLDKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL + Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 S I +A K + ++ GI + + G + +G A++I Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGIALAEHILK 289 >gi|332360583|gb|EGJ38393.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1056] Length = 306 Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats. Identities = 109/302 (36%), Positives = 161/302 (53%), Gaps = 9/302 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKAIH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L +L Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLANLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + L P+ QGA+ +E + + + L+ + E T V ERA LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLATVQDEKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA FA G ++ DG+ VS G D + A + + Sbjct: 240 MNADCTFPIAAFAQKNGQNYQLEAMLAKEDGQCVF-VSLQG--QDGQQLAEQAVRQLADK 296 Query: 300 SN 301 Sbjct: 297 GA 298 >gi|295131995|ref|YP_003582671.1| porphobilinogen deaminase [Zunongwangia profunda SM-A87] gi|294980010|gb|ADF50475.1| porphobilinogen deaminase [Zunongwangia profunda SM-A87] Length = 304 Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats. Identities = 90/303 (29%), Positives = 149/303 (49%), Gaps = 10/303 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RIGTR S LAL A +S+L + H ++P+ + GD + L E+G G Sbjct: 2 NKVIRIGTRDSELALWQAKTVQSALEKL----GHQTELVPVKSTGDLNLDVPLYEMGITG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT+ ++ +++G++D AVHS KD+PT L KG+ +A L R + +D+ H L Sbjct: 58 IFTKTLDIAMLTGKVDIAVHSMKDVPTALPKGIVEAAVLKRANTKDIL-IHKGTDF--LD 114 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 I T SLRRK+ L V+D RG + TR+ KL ++ + + A AG++R++ + Sbjct: 115 AQGTIATGSLRRKSQWLHRYPTHEVVDLRGNVNTRMQKLEDSNWNGAIFAAAGLERIEIK 174 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++++ P+P QGA+ + + + + +NH T V+ ER FL L+G Sbjct: 175 PEN--FIDLDWMIPAPAQGAMLVVALEKDEFTRTAIGALNHYQTDLEVHVEREFLRTLEG 232 Query: 243 SCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C + I A L+F G + + DG EV + + G+ A+ I Sbjct: 233 GCTAPIGALAKIDNDNILHFKGALFSLDGSQKIEVEKRIAADNVAEFGKFCAKEILAKGG 292 Query: 302 KNV 304 + Sbjct: 293 AKL 295 >gi|167569219|ref|ZP_02362093.1| porphobilinogen deaminase [Burkholderia oklahomensis C6786] Length = 280 Score = 311 bits (798), Expect = 8e-83, Method: Composition-based stats. Identities = 102/270 (37%), Positives = 156/270 (57%), Gaps = 2/270 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L +G ++A + RED RD F+S+ SL +L Sbjct: 71 VKELENALADGRADLAVHSLKDVPMELPEGFALAAVMSREDPRDAFVSNAYASLAELPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARYPQLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+++D P+ GQGA+ IE + ++ T +V ERA L GSC Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDCATALAVEAERAVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFH 274 + +A A +G L+ G V +DG+ Sbjct: 251 EVPLAAHAVWRGDELHLTGSVSTTDGRRVL 280 >gi|255526355|ref|ZP_05393269.1| porphobilinogen deaminase [Clostridium carboxidivorans P7] gi|255509932|gb|EET86258.1| porphobilinogen deaminase [Clostridium carboxidivorans P7] Length = 290 Score = 311 bits (798), Expect = 8e-83, Method: Composition-based stats. Identities = 99/295 (33%), Positives = 155/295 (52%), Gaps = 6/295 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +I TR S LA L + H + + + T GD+I + +L++IGGKGLF Sbjct: 2 KLKIATRRSQLAQVQTETIMKILKENHNV---EAEKLLVETTGDKILDVSLSKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE L+ + D AVHS KD+P + I + PRED+RD F+S K+L Sbjct: 59 IKEIEVALLEDKADAAVHSMKDVPFDVPDMFDIVSIPPREDVRDAFVSMNGVHFKELKKG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGTSS RR A + R D+ ++ RG ++TR++K+ I+LA AG+KR+ E + Sbjct: 119 AKIGTSSNRRAAQVKLLRPDLEIVPIRGNVQTRISKIEKENLDGIILAAAGLKRMNMENI 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + ++ + P+ GQGA+ IET N+ +++ K + E+T V ER+F+ L+G C Sbjct: 179 ITDYFDVNEMVPAVGQGALGIETKKNSVN-EDIFKKMEDENTRICVEAERSFMRTLNGDC 237 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S I +A +T+ GI D + GN+ D + +G A+ I Sbjct: 238 HSTIGAYAQINENTISIIGIFQVGD--NLIKRDIAGNKEDYMELGYKLAKKIIEA 290 >gi|146419731|ref|XP_001485826.1| hypothetical protein PGUG_01497 [Meyerozyma guilliermondii ATCC 6260] Length = 371 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 94/319 (29%), Positives = 153/319 (47%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K +IG R LA+A + + L V K P I+ LST GD+I ++ L GGK Sbjct: 8 TTKHIQIGGRKLTLAVAQSNIVKKHL--VAKFPQLKCSILALSTLGDQIQSQPLYLFGGK 65 Query: 62 GLFTEEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-- 114 L+T+E+E L+ ++D VHS KD+PT L + ++ L R D RDV + Sbjct: 66 ALWTKELETLLMQAIGGLPQLDMIVHSLKDVPTNLPEEFELGCILDRLDPRDVLVMRKGS 125 Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILL 171 +SL +L +++GTSS+RR + L++ + RG I TR+ KL+ +LL Sbjct: 126 KYKSLAELPAGTMVGTSSVRRSSQLMKNYPHLRFDSARGNINTRVQKLDAEDSPFECLLL 185 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG++R+ + I L+ D + GQGA+ +E + + ++L++ I T + Sbjct: 186 AAAGLQRVGLDHRITTYLDAPDMYYAVGQGALGVEIRKGDEQIKQLLQAIEDVPTSLCCH 245 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRN---GNRCDAI 286 ER+ + L+G C I +T L F IV++ DG F E + +A Sbjct: 246 AERSLMRYLEGGCSVPIGVHTDYDKTTQVLKFNAIVVSPDGNEFVEDKIEMKVTTKSEAD 305 Query: 287 NIGRDAAQYIRFISNKNVF 305 +G+ + K + Sbjct: 306 ALGQQLGDKLIAKGAKEIL 324 >gi|42520403|ref|NP_966318.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410142|gb|AAS14252.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila melanogaster] Length = 292 Score = 311 bits (797), Expect = 9e-83, Method: Composition-based stats. Identities = 112/295 (37%), Positives = 162/295 (54%), Gaps = 8/295 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LA+A A E + L+D P +I I+ + T GD+ N L EIGGKGLF Sbjct: 3 VKIGTRGSKLAVAQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFI 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE +L+ ID AVHS KDMP GL I L R D FISH SL+ L + Sbjct: 61 KEIETELLENNIDMAVHSLKDMPAFFSGGLTIPCVLERLSSCDAFISHKHNSLESLPQQA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 I TSS+RRK LL R D++++ RG + TR L N I+LA AG+ RL+K +I Sbjct: 121 TIATSSIRRKVQLLNVRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLI 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L + + GQGA+CI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC Sbjct: 178 TEVLPPKVMLSAVGQGAVCIQCRRNDVKIIDLLEKINNNMSFIGVKSERSFMKTVNGSCF 237 Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + +A A + L+ ++ + GK + R DA +G DA ++ Sbjct: 238 TPLAALAEYVSENMLHLRCMLAS--GKNIYFTERTSFIEDAEKMGMDAGLELKSK 290 >gi|83945095|ref|ZP_00957461.1| porphobilinogen deaminase [Oceanicaulis alexandrii HTCC2633] gi|83851877|gb|EAP89732.1| porphobilinogen deaminase [Oceanicaulis alexandrii HTCC2633] Length = 320 Score = 311 bits (797), Expect = 9e-83, Method: Composition-based stats. Identities = 108/302 (35%), Positives = 171/302 (56%), Gaps = 8/302 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVH--KIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR SPLA+A + ++ L H K P + I+ ++T GDRIT+R L GGKGLFT Sbjct: 8 IATRTSPLAMAQTLDVQARLAKAHGEKDPEESFPILGMTTTGDRITDRALLLAGGKGLFT 67 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKDLALH 124 +E+E+ L+ G+ AVHS KD+PT L GL+I+ L RED RD ++ S ++DL Sbjct: 68 KELERALLDGDARFAVHSMKDVPTTLPDGLEIACVLEREDPRDTLLTRDGISRIEDLPQG 127 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT+S+RR++ L R D++++ RG ++TRL KLN+ + A LA AG++RL +E+ Sbjct: 128 ATLGTASIRRQSQALALRPDLNIVLLRGNVDTRLEKLNSGEVDATFLARAGLRRLGREQA 187 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 L + P+P QGA+ IE ++ +A++ ++ +NH T ++ ER FL LDGSC Sbjct: 188 ELPPLELTAVIPAPAQGAVGIEIRSDDVEARKALEPLNHLPTRIAIAAERGFLQALDGSC 247 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG-----NRCDAINIGRDAAQYIRFI 299 ++ IA A +G+ ++ G L DG + A +G + ++ Sbjct: 248 RTPIAAHATLEGAEIHLRGEALMPDGSKRWANETRAQLPELDPDAARLLGYELGLEVKRA 307 Query: 300 SN 301 Sbjct: 308 GG 309 >gi|227545398|ref|ZP_03975447.1| porphobilinogen deaminase [Lactobacillus reuteri CF48-3A] gi|300908522|ref|ZP_07125985.1| hydroxymethylbilane synthase [Lactobacillus reuteri SD2112] gi|112944692|gb|ABI26362.1| porphobilinogen deaminase [Lactobacillus reuteri] gi|227184680|gb|EEI64751.1| porphobilinogen deaminase [Lactobacillus reuteri CF48-3A] gi|300893929|gb|EFK87287.1| hydroxymethylbilane synthase [Lactobacillus reuteri SD2112] Length = 305 Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats. Identities = 96/308 (31%), Positives = 154/308 (50%), Gaps = 7/308 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +G+R S LA+A +SL ++ P I + T+GDR +L +IGG Sbjct: 1 MTDKVI-VGSRKSKLAMAQTKLVIASLKEL--FPTTQFEIKNVITEGDRNQQASLAKIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLK 119 KG+F +EIE++L + ID AVHS KD+ L L + A+ R D +S SL Sbjct: 58 KGVFVKEIEEELKNCTIDFAVHSLKDVMPVLPDELTLGAFPKRVSPFDCLVSRQEFTSLD 117 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + IGT+SLRR+ LL R D+ +I RG I+TRL K++ ++LA AG+ RL Sbjct: 118 ALPHGARIGTNSLRRQGQLLNVRPDLKIIPIRGNIDTRLKKIDTENLAGVVLAEAGLDRL 177 Query: 180 KKEKVIKEILNI-EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + L++ + P+ GQG + IE + + ++++ IN + ++ ER F+ Sbjct: 178 SIDLSSYHQLSLKDIIVPAVGQGCLAIECRKADERVRKMLDQINDPQSAKCIHIEREFMR 237 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 EL GSC I G AY + + F G++ + +G+ + +G+ A + Sbjct: 238 ELGGSCNFPIGGHAYLQDQQIVFDGLIASPNGEHLIK-EVAVPANKP-GVGKVVADQLLA 295 Query: 299 ISNKNVFN 306 N + Sbjct: 296 KDNFGIIE 303 >gi|282865645|ref|ZP_06274696.1| porphobilinogen deaminase [Streptomyces sp. ACTE] gi|282559689|gb|EFB65240.1| porphobilinogen deaminase [Streptomyces sp. ACTE] Length = 328 Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats. Identities = 94/315 (29%), Positives = 156/315 (49%), Gaps = 17/315 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KP R+GTR S LA+A + ++ +V + ++ ++T GD ++ L +IGG G Sbjct: 12 TKPLRLGTRRSKLAMAQSGMVADAVREVT---GRAVELVEITTYGD-VSREHLAQIGGTG 67 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F + + L GE+D AVHS KD+PT +GL ++A RED RDV ++ + L Sbjct: 68 VFVAALREALARGEVDFAVHSLKDLPTTQPEGLVLAAVPVREDPRDVLVARDGLTFAQLP 127 Query: 123 LHSVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 + IGT S RR A L D+ + RG ++TR+N + + A++LA AG+ R Sbjct: 128 SGARIGTGSPRRMAQLNAYARSHGLDMETVAIRGNVDTRINFVRTGELDAVVLAAAGLSR 187 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + + + L+ + P+PGQGA+ IE ++ + + ++ T +V ERA LA Sbjct: 188 LGRTGEVTDFLSTDTVLPAPGQGALAIECAEDSTELAAALAELDDPHTRVAVTAERALLA 247 Query: 239 ELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAINIG 289 L+ C + + A L G+V ++DG ++S G+ DA G Sbjct: 248 ALEAGCSAPVGALADLLADGQIVNELRLRGVVGSTDGTSLVQLSITGSVPTSHDDAAAFG 307 Query: 290 RDAAQYIRFISNKNV 304 R+ A + + Sbjct: 308 RELASEMLAKGAAGL 322 >gi|170759533|ref|YP_001786306.1| porphobilinogen deaminase [Clostridium botulinum A3 str. Loch Maree] gi|238058921|sp|B1KY15|HEM3_CLOBM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|169406522|gb|ACA54933.1| hydroxymethylbilane synthase [Clostridium botulinum A3 str. Loch Maree] Length = 290 Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 103/293 (35%), Positives = 153/293 (52%), Gaps = 6/293 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LA L H + + T GD+I +L +IGGKGLF Sbjct: 3 FIIATRRSKLAQVQTEIIIDLLNKKH---DIECEKLLIETVGDKILEVSLDKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL + Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLREGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 S I +A K + ++ GI + + G + +G A++I Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIVKKEITGTKDQYEKLGIALAEHILK 289 >gi|126662834|ref|ZP_01733833.1| hypothetical protein FBBAL38_05745 [Flavobacteria bacterium BAL38] gi|126626213|gb|EAZ96902.1| hypothetical protein FBBAL38_05745 [Flavobacteria bacterium BAL38] Length = 305 Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 92/306 (30%), Positives = 153/306 (50%), Gaps = 9/306 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A + L D+ + II + ++GD I ++ L E+G Sbjct: 1 MS-KIIRIGTRDSELALWQAHTVQKKLNDL----GYKTEIIAVKSQGDIILDKPLYELGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ +++G++D AVHS KD+PT L G+ +A L R + D+ + +L Sbjct: 56 TGIFTKTLDIGMLNGQVDIAVHSMKDVPTALPIGIVQAAVLERANTLDILVHKG--NLDF 113 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L I T SLRR+A L + V+D RG + TR+ KLN ++ + + A AG++R+ Sbjct: 114 LTSSGTIATGSLRRQAQWLNKYPNHKVVDLRGNVNTRMQKLNESEWNGAVFAAAGLERIN 173 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + ++++ P+P QGA+ + + E + +N +T ER FL L Sbjct: 174 IKPENY--IDLDWMTPAPAQGAMVVVAMEKDTYCTEALAKLNDRETEICTFIERQFLKTL 231 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C + I A + F G++ + +GK H + ++ N N G D A+ I Sbjct: 232 EGGCSAPIGALAKFTTENIEFEGVLFSLNGKEKHIIKKSCNFDSYKNFGADCAKEILNNG 291 Query: 301 NKNVFN 306 + Sbjct: 292 GAALME 297 >gi|328945742|gb|EGG39893.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1087] Length = 306 Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 109/302 (36%), Positives = 162/302 (53%), Gaps = 9/302 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++IGTSS+RR+ L R D++ RG I+TR+ KL + +I+LA AG+KRL Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDSIVLAMAGLKRLGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + L P+ QGA+ +E + + ++L+ + E T V ERA LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDKELRQLLATVQDEKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA A KG ++ DG+ VS G D + A + + Sbjct: 240 MNADCTFPIAALAQKKGQDYQLEAMLAKEDGQCVF-VSLQG--QDGQELAEQAVRQLADK 296 Query: 300 SN 301 Sbjct: 297 GA 298 >gi|15893393|ref|NP_346742.1| porphobilinogen deaminase [Clostridium acetobutylicum ATCC 824] gi|25453028|sp|Q97MU4|HEM3_CLOAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|15022921|gb|AAK78082.1|AE007522_6 Hydroxymrthylbilane syntase (porphobilinogen deaminase) [Clostridium acetobutylicum ATCC 824] gi|325507505|gb|ADZ19141.1| porphobilinogen deaminase [Clostridium acetobutylicum EA 2018] Length = 291 Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 102/294 (34%), Positives = 161/294 (54%), Gaps = 6/294 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LA + L D + I + + T GD+I +++L +IGGKGLF Sbjct: 2 KLTIATRKSKLAQVQTELIINVLKDKYGISS---EKLLMETLGDKILDKSLADIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 ++IE+ L+ + D AVHS KD+P ++ +I+A R D+RDVF+S KDL Sbjct: 59 IKDIERILLEDKADAAVHSMKDVPFEVPDMFEIAAVTLRVDVRDVFVSRDGTHFKDLKNG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +VIGTSS RR A L R DI V+ RG ++TR+ K+ K I+LA AG+KRL E + Sbjct: 119 AVIGTSSNRRAAQLKMLRDDIKVVPIRGNVQTRIRKMGEEKLDGIILAAAGLKRLNMENI 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + ++E+ P+ GQGA+ +E N ++L + ++++++ V ER+F+ L+G C Sbjct: 179 ITDYFSVEEMIPAVGQGALGVEIKKENKN-RDLFRKLDNKNSRMCVEAERSFMRTLNGDC 237 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 S I +A + G DG+ + +GN D +++G+ A+ I Sbjct: 238 HSTIGAYAEIVNGQMNVLGFY-EIDGRRVKKD-VSGNIEDYMSLGKTLAEKILE 289 >gi|331085795|ref|ZP_08334878.1| porphobilinogen deaminase [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406718|gb|EGG86223.1| porphobilinogen deaminase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 292 Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 7/295 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ R+G+R S LA+ + L +H P I ++ + T GD+I +R+L +IGGKG Sbjct: 2 KRKIRVGSRESKLAVVQSEMIIQELKKLH--PQLEIELVTMKTTGDKILDRSLDQIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+++ L+ GEID AVH KDMP + + L I AY RED RDV + + ++ Sbjct: 60 LFVKELDRALLDGEIDLAVHCLKDMPMETPEELPILAYSRREDPRDVLVPAKGK--ENWN 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 VIG SS RR+ L + D V RG I+TRL KL++ + ++LA AG+KRL E Sbjct: 118 GQGVIGCSSFRRRIQLQKLYPDAEVRGIRGNIQTRLQKLDSGQYDVLVLAAAGLKRLGLE 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ + E+ P+ GQG + ++ + +ELVK + E+ ERAF+ LDG Sbjct: 178 ERIERYFSPEEILPAAGQGILVVQGR---EEMRELVKKLQPEEMEVIAENERAFVRRLDG 234 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C S +A + + L G+ D + ++ + ++G + A +R Sbjct: 235 GCSSPVAAYGRIEQDELVLTGLYYEEDTGNYVIATKRAEVRASAHLGWELADELR 289 >gi|327473567|gb|EGF18987.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK408] Length = 306 Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 9/302 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKKLH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+ RL Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLNRLGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + L P+ QGA+ +E + + ++L+ + E T V ER LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDEKTAAEVAVERVVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA FA G ++ DG+ VS G D + A + + Sbjct: 240 MNADCTFPIAAFAQKNGQDYQLEAMLAKEDGQCVF-VSLKG--QDGQQLAEQAVRQLADK 296 Query: 300 SN 301 Sbjct: 297 GA 298 >gi|119478980|ref|XP_001259519.1| hydroxymethylbilane synthase, putative [Neosartorya fischeri NRRL 181] gi|119407673|gb|EAW17622.1| hydroxymethylbilane synthase, putative [Neosartorya fischeri NRRL 181] Length = 341 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 96/319 (30%), Positives = 150/319 (47%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++ F IGTR S LAL ++L P + I T GD+ T L E K Sbjct: 15 SRRTFTIGTRKSKLALMQTDLVVAALKK--SWPEYTFQIHSQETAGDKNTVIALREFTTK 72 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS---L 118 L+T+E+E+ L++G++D VHS KD+PT+L + + RED RDV + Sbjct: 73 NLWTQELEELLMAGDVDLIVHSLKDVPTQLPPSCTLGPMMEREDTRDVLVMKKGLPNMAF 132 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGI 176 ++ SV+GTSS+RR A L R + V D RG I TRL KL+ I+LA AG+ Sbjct: 133 SEMPAGSVVGTSSIRRTAQLARRYPHLKVQDVRGNIGTRLAKLDAEDSPFTCIILAAAGL 192 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 RL E I + L+ ++ + GQGA+ +E ++ ++++ I H +T + ER Sbjct: 193 LRLGLEDRISQYLDSKNGGMLYAVGQGALGVEIRKDDKLLRDMLSSIGHHETTMACLAER 252 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 + L L+G C + + L IV++ DG+ EV +G+ A Sbjct: 253 SLLRTLEGGCSAPLGVETEWVQDSDGSSKLRMRAIVVSVDGRESAEVEVDGSVDTSESAG 312 Query: 287 NIGRDAAQYIRFISNKNVF 305 G A+ + + Sbjct: 313 EFGVTVAKALVEKGAGEIL 331 >gi|167561971|ref|ZP_02354887.1| porphobilinogen deaminase [Burkholderia oklahomensis EO147] Length = 278 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 103/268 (38%), Positives = 156/268 (58%), Gaps = 2/268 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L +G ++A + RED RD F+S+ SL +L Sbjct: 71 VKELENALADGRADLAVHSLKDVPMELPEGFALAAVMSREDPRDAFVSNAYASLAELPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SV+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 SVVGTSSLRREAMLRARYPQLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+++D P+ GQGA+ IE + ++ T +V ERA L GSC Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDCATALAVEAERAVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKI 272 + +A A +G L+ G V +DG+ Sbjct: 251 EVPLAAHAVWRGDELHLTGSVSTTDGRR 278 >gi|324993558|gb|EGC25478.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK405] gi|324995130|gb|EGC27042.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK678] gi|327458927|gb|EGF05275.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1057] gi|327461831|gb|EGF08162.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1] Length = 306 Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats. Identities = 109/302 (36%), Positives = 161/302 (53%), Gaps = 9/302 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKKLH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + L P+ QGA+ +E + + ++L+ + E T V ER LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDEKTAAEVAVERVVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA FA G ++ DG+ VS G D + A + + Sbjct: 240 MNADCTFPIAAFAQKNGQDYQLEAMLAKEDGQCVF-VSLKG--QDGQQLAEQAVRQLADK 296 Query: 300 SN 301 Sbjct: 297 GA 298 >gi|116199079|ref|XP_001225351.1| hypothetical protein CHGG_07695 [Chaetomium globosum CBS 148.51] gi|88178974|gb|EAQ86442.1| hypothetical protein CHGG_07695 [Chaetomium globosum CBS 148.51] Length = 343 Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats. Identities = 101/324 (31%), Positives = 152/324 (46%), Gaps = 25/324 (7%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 ++GTR S LAL ++L H P + ++T GDR + L E+G KGL+ Sbjct: 7 TIKMGTRRSALALRQTELVIAALQSAH--PHVTFEVHAMATAGDRDKSTPLPEMG-KGLW 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-------AQS 117 T E+E KL++ ++D VHS KDMPT L +G + RED RDV I + Sbjct: 64 TSELEAKLVARDVDVIVHSLKDMPTTLPEGCVLRCVPAREDPRDVVIFSKAREEAGRYKK 123 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 LKDL +V+GTSS+RR A L R + D RG IETRL K + AI+LA AG+ Sbjct: 124 LKDLPEGAVVGTSSVRRAAQLKRRYPGLVFRDVRGNIETRLRKCDEEGFDAIILAAAGLL 183 Query: 178 RLKKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 RL I + L+ + GQG + +E ++ + +EL+K I T + E Sbjct: 184 RLDLGARIAQYLDSNTEGGGLLHAVGQGGLGLEVREDDEQMKELLKAIEDTPTMTACFAE 243 Query: 234 RAFLAELDGSCKSAIAGFAYC--------KGSTLYFYGIVLASDGKIFHEVSRN---GNR 282 R+ + L+G C I K L +V++ DG E + + Sbjct: 244 RSVMRTLEGGCSVPIGVETAWVEEEEAGEKKKKLQLRAVVVSLDGSQAVEGEKTQEVTSL 303 Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306 A +G++ AQ + + + + Sbjct: 304 EQAEAMGKELAQELAGRGAQQILD 327 >gi|254455286|ref|ZP_05068715.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. HTCC7211] gi|207082288|gb|EDZ59714.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. HTCC7211] Length = 305 Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats. Identities = 109/301 (36%), Positives = 177/301 (58%), Gaps = 1/301 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M KK IG+R S LAL +A + + ++ I +I+I ++TKGD++ + L+E+GG Sbjct: 1 MNKK-ITIGSRGSKLALIYAQKAKDKIIQNTNIKDEDIIIKEITTKGDQVQDMRLSEVGG 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF+ IEK+L +ID AVH+ KDMP GL+ + +L R D R++ I+ + + L + Sbjct: 60 KGLFSTNIEKELQDKKIDIAVHALKDMPAIETVGLRTNTFLKRNDPREILIAQSGKKLNE 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++S+IGTSS RR+ + + RSDI+ RG ++TR+ KLN+ AI+L+YAGIK L+ Sbjct: 120 LKINSIIGTSSYRREFQIKKIRSDINCKLIRGNVDTRIKKLNDGLYDAIILSYAGIKSLE 179 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I EI +IE+ PS GQG I ++ N+ + ++ IN ++T + ER L L Sbjct: 180 IEDKITEIFSIEEIIPSAGQGIIALQCRNNDIEIISVLDEINDKETSSMAHAERNVLKVL 239 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C++AI A + + + + DGK ++ DA +G++ + ++ S Sbjct: 240 EGDCETAIGTHAIIEEDKIILQAELFSLDGKQRFFEKKSSKINDARELGKELGEILKTKS 299 Query: 301 N 301 N Sbjct: 300 N 300 >gi|145592923|ref|YP_001157220.1| porphobilinogen deaminase [Salinispora tropica CNB-440] gi|145302260|gb|ABP52842.1| hydroxymethylbilane synthase [Salinispora tropica CNB-440] Length = 322 Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats. Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 11/308 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + + +L P + ++ + T GDR + + ++G G+F Sbjct: 4 PLRLGTRGSALAMAQSGQVAEALTAATGTP---VELVEVVTTGDR-STAPVHQLG-VGVF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L +G ID AVHS KD+PT GL ++A PR+D RD ++ ++L +L Sbjct: 59 VSALRDALAAGAIDFAVHSYKDLPTAAAPGLYVAAVPPRQDPRDALVATGGRTLAELPPG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRLKKE 182 + +GT +LRR A L + V RG + TRL ++ +A A++LA AG+ RL + Sbjct: 119 ARVGTGALRRIAQLHALGLQLEVQPIRGNVGTRLARVLGPEADLDAVVLARAGLARLDRT 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E L+ P+P QGA+ +E ++ EL+ V++H + +V ERA LA L+ Sbjct: 179 DTITETLDPMLMLPAPAQGALAVECRSDDSALVELLAVLDHAPSRATVVAERALLATLEA 238 Query: 243 SCKSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C + +A +A G +Y G V++ DG +SR G DA+ IG+ A + Sbjct: 239 GCSAPVAAYAELAEGDVGEEIYLRGAVISPDGTRDLRLSRTGTPADAVEIGKALATDLLD 298 Query: 299 ISNKNVFN 306 + ++ Sbjct: 299 LGADSILG 306 >gi|254418576|ref|ZP_05032300.1| porphobilinogen deaminase [Brevundimonas sp. BAL3] gi|196184753|gb|EDX79729.1| porphobilinogen deaminase [Brevundimonas sp. BAL3] Length = 317 Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats. Identities = 112/309 (36%), Positives = 165/309 (53%), Gaps = 8/309 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV----IIPLSTKGDRITNRTLTEIGG 60 P RIGTR S LALA + + ++ + I ++ + T GDRI +R L E+GG Sbjct: 4 PLRIGTRRSKLALAQSGMMQRAIGRALGVAEAEIEAAVPLVEIVTTGDRIQDRRLMEMGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K LFT+EIE+ L+ ID A+HS KD+P + +GL I+A RED RD FIS S Sbjct: 64 KALFTKEIEEALLDRRIDIAIHSMKDVPAEQPEGLCIAAIPEREDARDAFISRDFDSFDQ 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRR+A L R D+ V RG I+TRL + AILLA +G+ RL Sbjct: 124 LPFGARLGTASLRRQAQALALRPDLKVEMLRGNIDTRLRRAAEGDFDAILLAVSGMTRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+E L+++ F P+PGQGA+ I+T ++ A V +NH +T +V ER + L Sbjct: 184 VTEHIREKLSLDAFLPAPGQGALAIQTRADDIDA-PWVAALNHPETAVAVAAERGAMTAL 242 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIR 297 +GSC++A+ +A +G TL +L+ DG DA +G + Sbjct: 243 EGSCRTAVGAYALIEGDTLRLTTEMLSPDGSARWRRVGELFQPTEADARALGERLGGEVH 302 Query: 298 FISNKNVFN 306 + + Sbjct: 303 AFAGDQEVD 311 >gi|39940760|ref|XP_359917.1| hypothetical protein MGG_04860 [Magnaporthe oryzae 70-15] gi|145010915|gb|EDJ95571.1| hypothetical protein MGG_04860 [Magnaporthe oryzae 70-15] Length = 340 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 93/323 (28%), Positives = 156/323 (48%), Gaps = 20/323 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +IGTR SPLA+ T + L H P + ++T+GD+ L +G K Sbjct: 3 NSRVIKIGTRRSPLAIRQVEHTVALLQKAH--PDITFEVNAIATQGDKDKVSPLPSMG-K 59 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA------ 115 G++T E+E L +GE+D VH KDMPT L ++ A + RED RDV + Sbjct: 60 GMWTNELEAMLTTGEVDFIVHCLKDMPTTLPDNCELGAVMEREDPRDVVVIKPKHVQAGC 119 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAY 173 +++ DL S++GTSS RR + L RW ++ D+RG I+TRL KL+ + + I+LA Sbjct: 120 KTIADLPKGSLVGTSSPRRSSQLKRWYPELRFRDYRGNIDTRLRKLDAEDGEFDCIILAA 179 Query: 174 AGIKRLKKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 AG+ R+ + I + L+ + GQGA+ +E + + ++++ + T + Sbjct: 180 AGLHRMDQHSRIAQYLDSTTEGGGVLHAVGQGALGLEVRKGDIETLKVIECLVDMPTMKA 239 Query: 230 VNCERAFLAELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNR---CD 284 ER + L+G C I +G TL V+A DG + + + + Sbjct: 240 GWAERTVMRTLEGGCSVPIGVETSWSDEGKTLRLRATVVALDGSEAVDADASASVSNQEE 299 Query: 285 AINIGRDAAQYIRFISNKNVFNF 307 A +G+ +Q + K + + Sbjct: 300 AEALGKQVSQVLVERGAKKILDV 322 >gi|325696921|gb|EGD38808.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK160] Length = 306 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 110/302 (36%), Positives = 162/302 (53%), Gaps = 9/302 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q L DL Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQKLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + L P+ QGA+ +E + + ++L+ + + T V ERA LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDDKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA FA KG ++ DG+ VS G D + A + + Sbjct: 240 MNADCTFPIAAFAQKKGQAYQLEAMLAKEDGQCVF-VSLQG--QDGQELAEQAVRQLADK 296 Query: 300 SN 301 Sbjct: 297 GA 298 >gi|256425452|ref|YP_003126105.1| porphobilinogen deaminase [Chitinophaga pinensis DSM 2588] gi|256040360|gb|ACU63904.1| porphobilinogen deaminase [Chitinophaga pinensis DSM 2588] Length = 307 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 89/304 (29%), Positives = 147/304 (48%), Gaps = 7/304 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +IGTR S LAL A + + L ++ V++P+ ++GD L EIG +G Sbjct: 2 NREIKIGTRDSQLALWQANKVKGLLEAQ----GYSTVLVPIKSEGDIDLVTPLYEIGVQG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT+ ++ L++G ID AVHS KD+PT+L K + +A L R ++D+ + + Sbjct: 58 IFTKSLDIALLNGRIDIAVHSLKDVPTQLPKNIIQAAVLERGPVKDLLVYRQDTAFLGQP 117 Query: 123 LH-SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + + I TSS+RRKA LR + + RG + TRL KL + A AG++R+ Sbjct: 118 EYIANIATSSVRRKAQWLRKYPKHQLHNLRGNVNTRLQKLAAENWDGAIFAAAGLERIGV 177 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ P+P QGA+ ++ ++ N T ER FL L Sbjct: 178 --RPATSIELDWMLPAPAQGAVVAVCREDDDFCRQACAPFNDLATALCTRVERDFLRTLM 235 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C + I+ +A T++F G + + DG+ ++ DA IGR AA+ I Sbjct: 236 GGCTTPISAYATISNETVHFSGELCSLDGQQLFTITEQLPLQDAGVIGRSAAEKILAQGG 295 Query: 302 KNVF 305 + Sbjct: 296 DKIV 299 >gi|207723608|ref|YP_002254006.1| porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase) (hmbs) (pre-uroporphyrinogen synthase) protein [Ralstonia solanacearum MolK2] gi|207742664|ref|YP_002259056.1| porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase) (hmbs) (pre-uroporphyrinogen synthase) protein [Ralstonia solanacearum IPO1609] gi|206588811|emb|CAQ35773.1| porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase) (hmbs) (pre-uroporphyrinogen synthase) protein [Ralstonia solanacearum MolK2] gi|206594058|emb|CAQ60985.1| porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase) (hmbs) (pre-uroporphyrinogen synthase) protein [Ralstonia solanacearum IPO1609] Length = 302 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 99/293 (33%), Positives = 153/293 (52%), Gaps = 6/293 (2%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF +E+E L G Sbjct: 1 MWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLFVKELEVALAEGR 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 D AVHS KD+P +L G + A L RED RD F+S+ L L +V+GTSSLRR+A Sbjct: 59 ADLAVHSLKDVPMELPPGFALPAILEREDPRDAFVSNQYADLAALPAGAVVGTSSLRREA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 L + + RG ++TRL KL+ AI+LA AG+KRL + I+ ++ + P Sbjct: 119 SLRARFPHLVIQPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLSERIRAVIASDVSLP 178 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + GQGA+ IET + Q + ++H T +V ERA L GSC+ +A FA+ Sbjct: 179 AAGQGALGIETRADRTDVQAWLAPLHHLPTALAVTAERAVSRRLGGSCQVPLAAFAHWTD 238 Query: 257 -STLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISNKNVF 305 L V + DG+ +A +G AQ + ++ Sbjct: 239 AGALRLRAFVASQDGRRKLAAEGEATPATLAEAEALGARVAQQMLDGGAWDIL 291 >gi|225677334|ref|ZP_03788309.1| porphobilinogen deaminase [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590620|gb|EEH11872.1| porphobilinogen deaminase [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 292 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 110/295 (37%), Positives = 162/295 (54%), Gaps = 8/295 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LA+A A E + L+D P +I I+ + T GD+ N L EIGGKGLF Sbjct: 3 VKIGTRGSKLAVAQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFI 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE +L+ ID AVHS KD+P GL I L R D FISH SL+ L + Sbjct: 61 KEIEAELLENNIDMAVHSLKDVPAFFSGGLTIPCVLERLSPCDAFISHKHNSLESLPQQA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +I TS++RRK LL +R D++++ RG + TR L N I+LA AG+ RL+K +I Sbjct: 121 IIATSAIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLI 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L + + GQGAICI+ N+ K +L++ IN+ ++ V ER+F+ ++ SC Sbjct: 178 TEVLPPKVMLSAVGQGAICIQCRRNDVKIIDLLEKINNNMSFIRVKSERSFMKTVNASCF 237 Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + +A A + L+ ++ D K + R DA +G DA ++ Sbjct: 238 TPLAALAEYVSENMLHLRCMLA--DEKNIYFTERTSFIEDAEKMGMDAGLELKSK 290 >gi|153813574|ref|ZP_01966242.1| hypothetical protein RUMOBE_03996 [Ruminococcus obeum ATCC 29174] gi|149830319|gb|EDM85411.1| hypothetical protein RUMOBE_03996 [Ruminococcus obeum ATCC 29174] Length = 312 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 98/297 (32%), Positives = 153/297 (51%), Gaps = 6/297 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K IG+R S LA+ + R + + H P ++ I+ + T GD+I +RTL ++GGK Sbjct: 6 AKNKVIIGSRESRLAVLQSEMVRDYIKEQH--PGLDVEILTMKTTGDKILDRTLDKVGGK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E++K L+ G +VHS KDMP ++ + L + A+ RED RDV + L Sbjct: 64 GLFVKELDKALLEGRTMLSVHSLKDMPMEVPEDLPLLAFSRREDPRDVLVLPEGA--ASL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +G SSLRR L D+ V RG ++TRL KL+ + ++LA AG+KRL Sbjct: 122 DPLKPLGCSSLRRTLQLQTIYPDMKVKSIRGNLQTRLRKLDAGEYAGLILAAAGLKRLGL 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 EK I + ++ P+ GQG + ++ H E + ED W + ERAF+ LD Sbjct: 182 EKRIHRYFSADEILPAAGQGILAVQGHKGLKY--EYLSGYKDEDAWIAGTAERAFVRYLD 239 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 G C S +A F +G L+ G+ + + S G + +A +G A+ ++ Sbjct: 240 GGCSSPVAAFGIVEGEELFLRGLYYREKDGRYFKDSIRGPKTEAARLGMCLAEQMKR 296 >gi|284992946|ref|YP_003411500.1| porphobilinogen deaminase [Geodermatophilus obscurus DSM 43160] gi|284066191|gb|ADB77129.1| porphobilinogen deaminase [Geodermatophilus obscurus DSM 43160] Length = 312 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 91/304 (29%), Positives = 152/304 (50%), Gaps = 8/304 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+GTR S LA + ++ +P + ++ +ST+GDR ++ + ++GG G+F Sbjct: 8 TLRLGTRASQLATTQSQAVADAITAASGVP---VELVHISTEGDR-SSVAIAQLGGTGVF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 I + L+ G +D AVHS KD+PT GL I+A PRED RD ++ +L +L Sbjct: 64 VTAIRQALLEGTVDVAVHSYKDLPTLPEPGLTIAAVPPREDPRDALVARDGLTLGELPAG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT + RR A L + V+ RG ++TR+ ++ A++LA AG+ RL + Sbjct: 124 ARVGTGAPRRVAQLRALGLGLEVVPIRGNVDTRMARVVPGDLDAVVLARAGLSRLGRLSA 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E L+ P+P QGA+ +E N+ + ++L+ ++ T V ER LA L+ C Sbjct: 184 VTETLDPLQVLPAPAQGALAVECRGNDERTRQLLAALDDAATRACVVAERTTLAALEAGC 243 Query: 245 KSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 + +A +A G L+ V A DG S G +A +GR+ A + Sbjct: 244 SAPVAAYAEVAEGEDGPELFLRASVTALDGSDGVRGSITGPPPEAERLGRELAAELLDRG 303 Query: 301 NKNV 304 + Sbjct: 304 AAEL 307 >gi|325661929|ref|ZP_08150549.1| porphobilinogen deaminase [Lachnospiraceae bacterium 4_1_37FAA] gi|325471781|gb|EGC74999.1| porphobilinogen deaminase [Lachnospiraceae bacterium 4_1_37FAA] Length = 292 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 7/295 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ R+G+R S LA+ + L +H P I ++ + T GD+I +R+L +IGGKG Sbjct: 2 KRKIRVGSRESKLAVVQSEMIIQELKKLH--PQLEIELVTMKTTGDKILDRSLDQIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+++ L+ GEID AVH KDMP + + L I AY RED RDV + + ++ Sbjct: 60 LFVKELDRALLDGEIDLAVHCLKDMPMETPEELPILAYSRREDPRDVLVPAKGK--ENWN 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 VIG SS RR+ L + D V RG I+TRL KL++ + ++LA AG+KRL E Sbjct: 118 GQGVIGCSSFRRRIQLQKLYPDAEVRGIRGNIQTRLQKLDSGQYDVLVLAAAGLKRLGLE 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ + E+ P+ GQG + ++ + +ELVK + E+ ERAF+ LDG Sbjct: 178 ERIERYFSPEEILPAAGQGILVVQGR---EEMRELVKELQPEEMEVIAENERAFVRRLDG 234 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C S +A + + L G+ D + ++ + ++G + A +R Sbjct: 235 GCSSPVAAYGRIQQDELVLTGLYYEEDTGNYVIATKRAEVRASAHLGWELADELR 289 >gi|296532729|ref|ZP_06895413.1| hydroxymethylbilane synthase [Roseomonas cervicalis ATCC 49957] gi|296266947|gb|EFH12888.1| hydroxymethylbilane synthase [Roseomonas cervicalis ATCC 49957] Length = 368 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 112/313 (35%), Positives = 158/313 (50%), Gaps = 14/313 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN----IVIIPLSTKGDRITNRTLTEIGG 60 P R+GTR SPLAL + +H P ++T GDRI ++ L +IGG Sbjct: 56 PLRVGTRGSPLALWQTRTFLELV--LHFCPVLRNAKAFEEHVIATSGDRIQDKRLADIGG 113 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF-------ISH 113 KGLF +EI + L+ G ID AVHS KD+ T+L G+ ++ L RED RD + Sbjct: 114 KGLFAKEIHEALLDGRIDFAVHSLKDLETELPPGIVLACTLRREDARDTLVLGPGAADAD 173 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173 A + + IGT+SLRR+A LL R D+ V RG + +RL KL + LLA Sbjct: 174 PADPFSAIPAGARIGTASLRRQAQLLHARPDLKVEMIRGNVGSRLAKLAGGECDGTLLAL 233 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG+KRL E +L+ E P+ GQG + + + + EL+ I E Sbjct: 234 AGLKRLGLESHASVVLDAEAMVPAAGQGIVGVTVRAADTELHELLSGIEDRTARAVSRAE 293 Query: 234 RAFLAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292 RA LA LDGSC++ I G A G L+ G+V DG + S +G +A IGR+ Sbjct: 294 RALLAALDGSCRTPIGGHARLLPGGELHLTGLVARPDGSFLLKRSLHGAAGEAERIGREL 353 Query: 293 AQYIRFISNKNVF 305 + +R S ++F Sbjct: 354 GESLRADSPADIF 366 >gi|49388603|dbj|BAD25718.1| putative porphobilinogen deaminase [Oryza sativa Japonica Group] gi|215686353|dbj|BAG87614.1| unnamed protein product [Oryza sativa Japonica Group] gi|215717107|dbj|BAG95470.1| unnamed protein product [Oryza sativa Japonica Group] Length = 264 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 106/260 (40%), Positives = 157/260 (60%), Gaps = 3/260 (1%) Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109 I ++ L +IGGKGLFT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD Sbjct: 2 ILDKPLADIGGKGLFTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDA 61 Query: 110 FISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAI 169 FI TA SL +L SV+G++SLRR++ +L + V++FRG ++TRL KL HA Sbjct: 62 FICLTASSLAELPAGSVVGSASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHAT 121 Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 LLA AG+KRL + +L++++ P+ QGAI I ++ + +NHEDT + Sbjct: 122 LLALAGLKRLNMAETATSVLSVDEMLPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLA 181 Query: 230 VNCERAFLAELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRC-D-AI 286 V CER FL+ LDG+C++ IA +A K F G++ + DG +E SR G D + Sbjct: 182 VACEREFLSVLDGNCRTPIAAYASRDKDGNCSFRGLLASPDGSTVYETSRTGPYDFDIMV 241 Query: 287 NIGRDAAQYIRFISNKNVFN 306 +G+DA ++ + F+ Sbjct: 242 EMGKDAGHELKAKAGPGFFD 261 >gi|332363288|gb|EGJ41073.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK49] Length = 306 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 110/302 (36%), Positives = 162/302 (53%), Gaps = 9/302 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAITQTQQLVDQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISRREDVRDCLIFRQAGQTLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 120 KGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + L P+ QGA+ +E + + + L+ + E T V ERA LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA FA G ++ DG+ VS G D + A + + Sbjct: 240 MNADCTFPIAAFAQKNGQDYQLEAMLAKEDGQCVF-VSLQG--QDGQELAEQAVRQLADK 296 Query: 300 SN 301 Sbjct: 297 GA 298 >gi|149174132|ref|ZP_01852760.1| porphobilinogen deaminase [Planctomyces maris DSM 8797] gi|148847112|gb|EDL61447.1| porphobilinogen deaminase [Planctomyces maris DSM 8797] Length = 318 Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 160/305 (52%), Gaps = 7/305 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 EK+P RI TR S LAL A+ L + I I+ ++++GDR L+E GG Sbjct: 6 EKRPLRIATRASNLALWQAYYVSDLLKK--QSSERPIEIVHITSEGDRDLTSPLSEFGGL 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----QS 117 G+FT E++K ++ G D AVHS KD+PT+ GLQ++ R + DV I + Sbjct: 64 GVFTREVQKAVLDGRADLAVHSLKDLPTEQAPGLQLAGIPERGPLYDVLIFPQGSEAVEH 123 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 + DLA + IGT SLRR+A LL RSD+ +++ RG +ETRL KL+ + A+ LA AG+ Sbjct: 124 ITDLADDARIGTGSLRRRAQLLHQRSDLQMLEVRGNVETRLKKLDAGEYDALCLAEAGMV 183 Query: 178 RLKK-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 RL+ E+ +L + P+ GQGA+ IE ++ + L+ ++ T + ER+ Sbjct: 184 RLELLEQRASLLLQPPEVYPAVGQGALGIECRADDEETAALLAGLSDPPTQAATTAERSL 243 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 LA L C + I + L +VL++DG S G+ +A +IG A+ + Sbjct: 244 LAHLRAGCHAPIGSLSQTTVDQLTLEAVVLSADGVERICASVTGSLTEAADIGVKVAKAL 303 Query: 297 RFISN 301 Sbjct: 304 LADGA 308 >gi|322435837|ref|YP_004218049.1| porphobilinogen deaminase [Acidobacterium sp. MP5ACTX9] gi|321163564|gb|ADW69269.1| porphobilinogen deaminase [Acidobacterium sp. MP5ACTX9] Length = 318 Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 100/320 (31%), Positives = 162/320 (50%), Gaps = 21/320 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITN---RTLTE 57 M + RIG+R S LAL A + L H + I + T GDR+ Sbjct: 1 MTQ--IRIGSRGSQLALWQANHIAAELRAH----GHQVEIEVIRTTGDRMQQPGFVPPPG 54 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 + GKG+F +EIE L+ G ID AVHS KD+PT + I+A PR D RD F+ + Sbjct: 55 LDGKGIFIKEIEDALLDGRIDLAVHSYKDLPTTIDPRFTIAAVPPRADARDAFVCEPYWA 114 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L IGT+S RR+A LL R D++ ++ RG I+TRL KL A++LA AG+ Sbjct: 115 LHTLPHAGRIGTTSPRRRAQLLALRPDLTFVELRGNIDTRLRKLEEGACDALVLACAGLD 174 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHV-----------NNPKAQELVKVINHEDT 226 R+ + + + + ++++ P+PGQGA+ +ET +P + ++ + H +T Sbjct: 175 RIARTESVHQRFDVDELTPAPGQGALALETRSPAHALDTEDPTRDPAIYKAIRALEHPET 234 Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-A 285 + + ERAFLAE+ G C+ + Y VL+ DG+ + + + + + A Sbjct: 235 RFATDAERAFLAEMGGGCELPLGAHCLSTSGVYRLYAQVLSPDGEYMVQTTLDRHPEEPA 294 Query: 286 INIGRDAAQYIRFISNKNVF 305 +G+ AA+ ++ ++ Sbjct: 295 AALGQRAAEILKAQGALDLL 314 >gi|329114337|ref|ZP_08243099.1| Porphobilinogen deaminase [Acetobacter pomorum DM001] gi|326696413|gb|EGE48092.1| Porphobilinogen deaminase [Acetobacter pomorum DM001] Length = 406 Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 111/320 (34%), Positives = 165/320 (51%), Gaps = 21/320 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-----NIVIIPLSTKGDRITNRTLTEIG 59 P R+GTR SPLAL R+ L + + P ++T GD++ NR L EIG Sbjct: 88 PLRVGTRGSPLALVQT---RAFLTTLTRFCPVLRDMGAFQEHQINTTGDQVQNRRLAEIG 144 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +EI + L G ID AVHS KD+ T L GL ++ L RED RD I + Sbjct: 145 GKGLFAKEIHEALADGRIDFAVHSLKDLETTLPPGLVLACTLKREDARDALILSPGLAQS 204 Query: 120 D-------LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLA 172 D L +++G +S+RR+A +L R D+ RG ++TRL+KL ++ A LLA Sbjct: 205 DPDDPYSALPEGALVGCASVRRQAQMLHVRPDLQFGLLRGNVQTRLDKLAAHQCQATLLA 264 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 AG+KRL + +L+ P+ GQG + + ++ + +EL+ I + Sbjct: 265 LAGLKRLGMAERASIVLDPTVMVPAAGQGIVGVTVREDDVELRELLSAIEDYEARAVATA 324 Query: 233 ERAFLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286 ER+ LAELDGSC++ I G+A K L+ G+V DG + S G DA Sbjct: 325 ERSLLAELDGSCRTPIGGYAQLLPAEEGKDPKLHLTGLVAREDGSFLLKRSITGMPEDAA 384 Query: 287 NIGRDAAQYIRFISNKNVFN 306 +G++ + +R S ++F Sbjct: 385 RLGKELGESLRKDSPSDIFE 404 >gi|171692929|ref|XP_001911389.1| hypothetical protein [Podospora anserina S mat+] gi|170946413|emb|CAP73214.1| unnamed protein product [Podospora anserina S mat+] Length = 341 Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 106/323 (32%), Positives = 155/323 (47%), Gaps = 20/323 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+ +IGTR S LALA ++L P + ++T GDR L +G K Sbjct: 3 EEYTVKIGTRRSALALAQTDLVIAALSKAAG-PSVKFEVHSMATMGDRDKTTPLPSLG-K 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-----AQ 116 GL+T E+E KL++ E+D VHS KDMPT L +G + A RED RDV + + Sbjct: 61 GLWTSELEAKLVNKEVDVIVHSLKDMPTSLPEGCVLGAVTQREDARDVVVFPRRQGGEYK 120 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYA 174 +LKDL SV+GTSS+RR A L R + D RG I+TRL K ++ AI+LA A Sbjct: 121 ALKDLPEGSVVGTSSVRRAAQLKRSYKGLVFRDVRGNIDTRLAKCDDENGGYDAIILAAA 180 Query: 175 GIKRLKKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 G+ RL ++ I + L + GQGA+ +E + K EL+K EDT + Sbjct: 181 GLLRLGYDERIGQYLESSTEGGGLLHAVGQGALGLEIREGDEKIAELIKAAVDEDTMMAA 240 Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGST----LYFYGIVLASDGKIFHEVSRN---GNRC 283 ER+ + L+G C I L V++ DGK + R N Sbjct: 241 FAERSVMRTLEGGCSVPIGVETKWVEDEGEKKLRLKVAVVSLDGKKAVDGERTEKIANLE 300 Query: 284 DAINIGRDAAQYIRFISNKNVFN 306 +A +G+ A+ + + + + Sbjct: 301 EAEALGKSLAEKLAREGAQEILD 323 >gi|315638143|ref|ZP_07893325.1| hydroxymethylbilane synthase [Campylobacter upsaliensis JV21] gi|315481679|gb|EFU72301.1| hydroxymethylbilane synthase [Campylobacter upsaliensis JV21] Length = 308 Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 97/304 (31%), Positives = 150/304 (49%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR SPLAL + L H + + STKGD + + L +IGGKGL Sbjct: 2 KKLIIATRKSPLALWQSEFVADILRKTHH---IEVDLEGFSTKGDILLDSPLAKIGGKGL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E ++ + AVHS KD+P+ L +GL ++A RED D +S + L L Sbjct: 59 FTKELENAMLENKAHLAVHSLKDVPSFLPQGLVLAALSVREDDTDALLSELYKDLNALPQ 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++ +GT+SLRRK LL R D+ +I+ RG + +RL +L + + AI+LA AG+KRL E Sbjct: 119 NAKVGTTSLRRKMQLLSLRPDLHIINLRGNVNSRLKRLKDGEFDAIILASAGVKRLGLES 178 Query: 184 VIK--EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +K + ++ P+ QG + I++ N + L++ +N E + ER F+ L+ Sbjct: 179 EVKFIYRFSKDELVPAATQGILGIQS-PNKSEILTLLQCLNDEKSLIESTVERDFIRTLE 237 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I A G + I+ DG R + + G A Sbjct: 238 GGCQVPIGINAELIGEQITVRSILGLPDGSEILRDKRIILKKNYQGFGERLALEFIKRGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELL 301 >gi|221126431|ref|XP_002156062.1| PREDICTED: similar to hydroxymethylbilane synthase, partial [Hydra magnipapillata] Length = 418 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 100/339 (29%), Positives = 156/339 (46%), Gaps = 37/339 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 EK +G+R S LA+ ++L K +I + T GD+I + L +IG K Sbjct: 27 EKTSVVVGSRKSQLAVIQTKSIVAALCQKEK--DVECIIETMDTLGDKILHIALPKIGEK 84 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 LFT+++E L +D VHS KD+PT L +G+ IS R+D RD I H + L Sbjct: 85 SLFTKDLELALSEKRVDFLVHSLKDLPTTLPQGMAISTIYKRDDPRDCIIFHPKHNGKKL 144 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIK 177 DL +S+IGTSSLRR A L R + ++ RG + TRL KL AI+LA AG+ Sbjct: 145 ADLPENSIIGTSSLRRVAQLKRKYNKLTFQSVRGNLNTRLQKLEEESLYDAIVLAKAGVD 204 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + I +IL+ ++ + GQGAI +E ++ ++ + +T + ER F+ Sbjct: 205 RMGWTEKIGQILSEDECLYAIGQGAITVEVRNDDKYTISILAQLTDMETLLACVAERCFM 264 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC-------------- 283 L+G C + IA + G+ GIVL +DG F + + + Sbjct: 265 RTLNGGCSTPIACHSQFSGNNYSLRGIVLNADGSRFLDSTVSTTLQVNILTDQNEPPSYT 324 Query: 284 -----------------DAINIGRDAAQYIRFISNKNVF 305 A G + A ++ + +V Sbjct: 325 VSKSGVVINSLYINEFIKAEKCGEELAYCLKKLGADDVL 363 >gi|167580196|ref|ZP_02373070.1| porphobilinogen deaminase [Burkholderia thailandensis TXDOH] Length = 286 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 102/275 (37%), Positives = 153/275 (55%), Gaps = 2/275 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMELPAGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARYPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++ED P+ GQGA+ IE + ++ T +V ERA L G+C Sbjct: 191 IRALLDVEDSLPAAGQGALGIEIAAGRADVAAWLAPLHDHPTALAVEAERAVSRALGGNC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 + +A A +G L+ G V +DG Sbjct: 251 EVPLAAHAVWRGDELHLTGSVSTTDGARVLAAHAQ 285 >gi|289642295|ref|ZP_06474444.1| porphobilinogen deaminase [Frankia symbiont of Datisca glomerata] gi|289507930|gb|EFD28880.1| porphobilinogen deaminase [Frankia symbiont of Datisca glomerata] Length = 313 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 104/308 (33%), Positives = 160/308 (51%), Gaps = 6/308 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RIGTR SP+ALA A R+ L ++ P I+P++T GDR T L+ +GGK Sbjct: 5 ASRLIRIGTRSSPMALAQAERVRAELTALN--PDLTAEIVPITTSGDRWTG-PLSTLGGK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLK 119 G FT+E+++ L++G D AVH KD+P + G +AYLPR+DIRD I ++L Sbjct: 62 GAFTKEVDEALLAGRADLAVHCMKDVPGDRPVPAGTVFAAYLPRDDIRDALIHPGGRTLD 121 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + +GTS++RR A L + + + RG TRL +L++ A A+LLA +G++R+ Sbjct: 122 QLPAGTRVGTSAVRRIAQLAQSHPHLETVPIRGNANTRLARLDDGAADALLLAVSGLERI 181 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I EIL+ E P G G + ++ ++ +LV ++ D V ER L Sbjct: 182 GQAGRITEILSAETMCPPIGAGVLGLQCREDDTDTAQLVAGMDDIDARRQVTAERMLLHV 241 Query: 240 LDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L G C S IAG A+ + L V + DGK + G D +G A + Sbjct: 242 LQGHCNSPIAGHAHTEPDGRLSLRAKVFSPDGKTVLDAHEWGPGTDPTTLGASVAVALLR 301 Query: 299 ISNKNVFN 306 +++ N Sbjct: 302 QGAQDLLN 309 >gi|114797250|ref|YP_761901.1| porphobilinogen deaminase [Hyphomonas neptunium ATCC 15444] gi|123128354|sp|Q0BX92|HEM3_HYPNA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|114737424|gb|ABI75549.1| porphobilinogen deaminase [Hyphomonas neptunium ATCC 15444] Length = 321 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 169/306 (55%), Gaps = 7/306 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K R+GTR SPLALA A + + ++ I+ +T GD++T L GGKGL Sbjct: 11 KRLRLGTRGSPLALAQAHQIADGIRAA-SAGAYDCEIVAFTTTGDKLTTERLINSGGKGL 69 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT E++ L GE+D AVHS KD+P+ L G +A+ RED RD F+SH A+S++DL Sbjct: 70 FTRELDDALSRGELDLAVHSLKDVPSVLPPGQIFAAFPKREDPRDGFLSHGAKSIQDLPE 129 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GT+SLRR+A L R D+ V+ FRG + TR+ KL A A LA AG+ RL + Sbjct: 130 GATLGTASLRREAQALALRPDLKVVTFRGNVATRMRKLEEGLADATFLAMAGLTRLGLSE 189 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V + +ED P+ GQG I + T + + + E++ ++HE + + ERAFL +LDG Sbjct: 190 VAT-PIPLEDMLPAAGQGIIGVVTRDDVDTELLEILGQLSHEPSRVAAIAERAFLEKLDG 248 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV----SRNGNRCDAINIGRDAAQYIRF 298 SC++ IA + +G G VL+ G ++ + +GR AQ I F Sbjct: 249 SCRTPIAAHLFDRGDEWQLIGEVLSPGGTTRWRGDGVCRKDATDAQLVLLGRAVAQEIIF 308 Query: 299 ISNKNV 304 + + + Sbjct: 309 AAKEAL 314 >gi|302511047|ref|XP_003017475.1| porphobilinogen deaminase Hem3, putative [Arthroderma benhamiae CBS 112371] gi|291181046|gb|EFE36830.1| porphobilinogen deaminase Hem3, putative [Arthroderma benhamiae CBS 112371] Length = 331 Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats. Identities = 98/321 (30%), Positives = 151/321 (47%), Gaps = 18/321 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K F IGTR S LA+ R +L V + P + GD L E K Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRDAL--VARWPDCEFNVHTRDAAGDLNKVTPLREFTSKN 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119 L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q +L Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPEACTLSAIMKREDPRDALVVKKGQPKMTLA 122 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177 +L SV+GTSS+RR A L R + VID RG I+TRL KL+ + I+LA AG+ Sbjct: 123 ELPAGSVVGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER Sbjct: 183 RSGHGDRIAQYLDSKNGKMLHAVGQGALGVEIRADDEKMAEMLREIGDQKTTFACLAERN 242 Query: 236 FLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAI 286 L L+G C + + G L IV + DGK E+ ++ A Sbjct: 243 LLRTLEGGCSAPLGVETEWVPNASGNGEMLRLRCIVTSIDGKEAVEIEKDCHVQAPEQAE 302 Query: 287 NIGRDAAQYIRFISNKNVFNF 307 G+ A + + Sbjct: 303 EFGKAVADEMVEKGAGKILEV 323 >gi|327489115|gb|EGF20910.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1058] Length = 306 Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats. Identities = 109/302 (36%), Positives = 161/302 (53%), Gaps = 9/302 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKKLH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L +L Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFLQAGQTLANLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + L P+ QGA+ +E + + + L+ + E T V ERA LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA A KG ++ DG+ VS G D + A + + Sbjct: 240 MNADCTFPIAALAQKKGQDYQLEAMLAKEDGQCVF-VSLQG--QDGQELAEQAVRQLADK 296 Query: 300 SN 301 Sbjct: 297 GA 298 >gi|167044207|gb|ABZ08888.1| putative Porphobilinogen deaminase, dipyromethane cofactor binding domain protein [uncultured marine microorganism HF4000_APKG5H11] Length = 322 Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats. Identities = 98/300 (32%), Positives = 148/300 (49%), Gaps = 3/300 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++G+R S LAL + L P + + T+GD L +G G+F Sbjct: 18 IKVGSRGSTLALIQDHVVINRLKA--NSPALEFEVDTVRTRGDVDQTSRLAGMG-LGIFV 74 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E++L+ G++D AVHS KDMPT+L GL + A L RED RDV ++ L L + Sbjct: 75 KELEQELLDGKLDIAVHSLKDMPTQLADGLVLGAVLSREDPRDVLVNRYGCPLDGLPKGA 134 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L ++ + V+ RG +ETRL K +A +LA AG+ RL + I Sbjct: 135 KIGTSSPRRAAQLKQYAPQVEVVSIRGNVETRLRKAQGEEADGAILAAAGMIRLGLQDQI 194 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ F P PGQG + +E ++ + EL+ I+ DT ER FLA L G C Sbjct: 195 AEYLSATQFVPPPGQGILAVEARADDFRMLELLSAIDDADTRYEATAERGFLARLGGGCS 254 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + +A C G + + +DG+ G + D + + DA + ++ Sbjct: 255 IPVGAYARCNGDNIVMTIYMSTADGEKKFSAKIQGLKRDPLQLANDAYLALVERGGADLV 314 >gi|312141093|ref|YP_004008429.1| hydroxymethylbilane synthase hemc [Rhodococcus equi 103S] gi|325674097|ref|ZP_08153787.1| hydroxymethylbilane synthase [Rhodococcus equi ATCC 33707] gi|311890432|emb|CBH49750.1| hydroxymethylbilane synthase HemC [Rhodococcus equi 103S] gi|325555362|gb|EGD25034.1| hydroxymethylbilane synthase [Rhodococcus equi ATCC 33707] Length = 334 Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats. Identities = 99/311 (31%), Positives = 152/311 (48%), Gaps = 15/311 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIGTR S LA A R +L+ H ++ + TKGD +T + IG G Sbjct: 19 SRTLRIGTRGSLLATTQAGHVRDALIAA----GHPAELVIIKTKGD-VTAGPVQRIG-VG 72 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F E+ + L++GE+D AVHS KD+PT L I+A RED RD ++ L +L Sbjct: 73 VFVAELREALVAGEVDVAVHSYKDLPTAQPDDLTIAAVPTREDPRDALVARDGLVLGELP 132 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S IGTS+ RR+A L + + RG I+TRL K+ + + AI++A AG+ R+ + Sbjct: 133 PGSRIGTSAPRRRAQLRAMGLGLEIEPLRGNIDTRLGKVASGELDAIVIARAGLSRIGRT 192 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I E L P+P QGA+ +E +NP ++ ++ T +V ERA LAEL+ Sbjct: 193 ERITETLEPVQMLPAPSQGALAVECRSDNPDLIAILGELDDHATRAAVVAERALLAELEA 252 Query: 243 SCKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 C + + A L G A DG S G+ A +GR A Sbjct: 253 GCTAPVGAIAEVVESLDDDGRVFEELSIRGCAAAIDGSDVIRASLVGSPERADELGRAVA 312 Query: 294 QYIRFISNKNV 304 + + + +++ Sbjct: 313 RELLDLGARDL 323 >gi|168178318|ref|ZP_02612982.1| porphobilinogen deaminase [Clostridium botulinum NCTC 2916] gi|182670871|gb|EDT82845.1| porphobilinogen deaminase [Clostridium botulinum NCTC 2916] Length = 290 Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats. Identities = 102/293 (34%), Positives = 153/293 (52%), Gaps = 6/293 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LA L H + + T GD+I +L +IGGKGLF Sbjct: 3 FIIATRRSNLAQVQTEIIIDLLNKKH---DIKCEKLLIETVGDKILEVSLDKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL + Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ GQGA+ IE +PK ++L K ++H ++ V ERAF+ ELDG C Sbjct: 180 TDYFDTKEMVPAIGQGALGIEIMEEHPK-KDLFKDLDHYNSKICVLAERAFMRELDGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 S I +A K + ++ GI + + G + +G A++I Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGIALAEHILK 289 >gi|297201478|ref|ZP_06918875.1| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083] gi|197716811|gb|EDY60845.1| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083] Length = 319 Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats. Identities = 95/317 (29%), Positives = 156/317 (49%), Gaps = 17/317 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K R+GTR S LALA + ++ V P + ++ ++T GD ++ L +IGG Sbjct: 1 MSTKALRLGTRRSKLALAQSGRVAEAVSQVTGRP---VELVEITTYGD-VSKEALAQIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L+ GE+D AVHS KD+PT L ++A RED RDV ++ A D Sbjct: 57 TGVFVTALREALLKGEVDFAVHSLKDLPTGQPDELVLAALPEREDPRDVIVARDALKFTD 116 Query: 121 LALHSVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + IGT S RR A L DI + RG I+TR+ + + + A++LA AG+ Sbjct: 117 LPPGARIGTGSPRRTAQLNAYARAHGLDIETVAIRGNIDTRMRFVRDGELDAVVLAAAGL 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 +R+ + + + L+++ P+PGQGA+ IE +N + ++ T +V ER+ Sbjct: 177 QRIGRIDEVTDFLSVDTVLPAPGQGALAIECTADNADLIAALGELDDPFTRVAVTAERSL 236 Query: 237 LAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAIN 287 LA L+ C + + A + G+V +DG ++S G A+ Sbjct: 237 LAALEAGCSAPVGALADLLADGQIVKEMRLRGVVGTTDGSRMVQLSTTGPVPETYDQAMA 296 Query: 288 IGRDAAQYIRFISNKNV 304 +GR+ A + + Sbjct: 297 LGRELAAEMLAQGAAGL 313 >gi|311744366|ref|ZP_07718168.1| hydroxymethylbilane synthase [Aeromicrobium marinum DSM 15272] gi|311312332|gb|EFQ82247.1| hydroxymethylbilane synthase [Aeromicrobium marinum DSM 15272] Length = 311 Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats. Identities = 89/303 (29%), Positives = 152/303 (50%), Gaps = 8/303 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + + +V + ++ +ST+GDR T L E+GG+G+F Sbjct: 8 LRLGTRASVLARTQSGHVADRITEVS---GRAVELVTISTEGDRSTG-PLAEMGGQGVFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + +G +D AVHS KD+PT L ++A PRED+RDV ++ +L +L + Sbjct: 64 AALREAVAAGHVDLAVHSLKDLPTAPDPRLALAAVPPREDVRDVVVARDGLTLGELPQGA 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGT S RR+A + + ++ RG ++TR+ K+ + + A++LA AG+ RL + Sbjct: 124 RIGTGSPRREAQINALGLGVEIVPIRGNVDTRIGKVASGEVDAVVLARAGLLRLGRADEA 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L+ P+PGQGA+ +E + + L+ ++ DT +V ER+ LA L+ C Sbjct: 184 TEVLDPIQVLPAPGQGALAVECRAGDDELIGLLAALDDADTRAAVTAERSLLAALEAGCS 243 Query: 246 SAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 + + A G L+ +V G +S G +A +G A + Sbjct: 244 APVGALAEVAWGDDGDELWIRAVVADPSGSPTIRLSATGLPAEAAAVGERLAAEMLADGA 303 Query: 302 KNV 304 + Sbjct: 304 DRI 306 >gi|291452105|ref|ZP_06591495.1| porphobilinogen deaminase 1 [Streptomyces albus J1074] gi|291355054|gb|EFE81956.1| porphobilinogen deaminase 1 [Streptomyces albus J1074] Length = 323 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 90/321 (28%), Positives = 157/321 (48%), Gaps = 21/321 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K R+GTR S LA+A + + ++ + P + ++ ++T GD + L +IGG Sbjct: 1 MTEKALRLGTRRSKLAMAQSGQVADAVHQLTGRP---VELVEITTYGDT-SREHLAQIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L+ GE+D AVHS KD+PT L ++A PRED RDV I+ ++ Sbjct: 57 TGVFVAALREALVRGEVDFAVHSLKDLPTAQPDELVLAAVPPREDPRDVLIARDGLRFEE 116 Query: 121 LALHSVIGTSSLRRKALLLRW----RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + +GT S RR A L + R + + RG I+TR+ + + + A++LA AG+ Sbjct: 117 LPEGARVGTGSPRRMAQLNAYARGHRMAVETVPIRGNIDTRIGFVRSGELDAVVLAAAGL 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK----AQELVKVINHEDTWDSVNC 232 R+ + + E L+++ P+PGQGA+ IE + ++ ++ T +V Sbjct: 177 HRVGRSDEVTEYLSVDTILPAPGQGALAIECAAGHEADGLPLAAVLAELDDPATRAAVTA 236 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----C 283 ER+ LA L+ C + + A + G+V + DG ++S G Sbjct: 237 ERSLLAALEAGCSAPVGALADLLADGQVVKEMRLRGVVGSPDGSALVQLSTTGPVPTTHD 296 Query: 284 DAINIGRDAAQYIRFISNKNV 304 +A +G + A + + Sbjct: 297 EAAALGTELAAEMLAKGAAGL 317 >gi|58585034|ref|YP_198607.1| porphobilinogen deaminase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419350|gb|AAW71365.1| Porphobilinogen deaminase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 292 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 116/295 (39%), Positives = 168/295 (56%), Gaps = 8/295 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+A A E + L+D+ ++ II + T GD+ N L EIGGKGLF Sbjct: 3 IRIGTRGSSLAIAQALEAKQKLLDL--FSSLSVEIIKIKTSGDKYANANLAEIGGKGLFI 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE +LI ID AVHS KD+P K L I L R D FIS+ +SLK L + Sbjct: 61 KEIETELIKSNIDMAVHSLKDVPAFFSKDLTIPCILERLSPYDTFISNKYKSLKSLPQQA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +I TSS+RRK LL +R D++++ RG + TR L N I+LA AG+ RLKK+ +I Sbjct: 121 IIATSSIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLKKDYLI 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L+ + + GQGAICI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC Sbjct: 178 TEVLSPKTMLSAVGQGAICIQCRKNDIKIIDLLEKINNNKSFIRVKSERSFMKTVNGSCF 237 Query: 246 SAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + +A A Y + L+ Y ++ D K + R DA +G DA ++ Sbjct: 238 TPLAALAKYVSENVLHLYCMLA--DKKNIYFTERTSFVEDAEKMGMDAGLELKSK 290 >gi|302381524|ref|YP_003817347.1| porphobilinogen deaminase [Brevundimonas subvibrioides ATCC 15264] gi|302192152|gb|ADK99723.1| porphobilinogen deaminase [Brevundimonas subvibrioides ATCC 15264] Length = 315 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 106/310 (34%), Positives = 162/310 (52%), Gaps = 12/310 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LALA + + ++ ++P +V++ + T GD+I +R L E+GGK LF Sbjct: 3 TIRIGTRRSALALAQSGMMQRAIAAAMQLPIEEVVLVEIVTTGDQIQDRRLMEVGGKALF 62 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+EIE+ L+ G +D AVHS KD+P + GL I+A RED RD FIS L+ L Sbjct: 63 TKEIEEALLDGRVDIAVHSMKDVPAEQPPGLTIAAIPEREDARDAFISRDFDELEHLPHG 122 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +GT+SLRR+A L R D+ + RG I+TRL + AILLA +G+ RL + Sbjct: 123 GRLGTASLRRQAQALALRPDLQIEMLRGNIDTRLRRAAEGDFDAILLAASGLNRLGRSDA 182 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ L+++ F P+PGQGA+ ++T + V+ +NH T V ER + L+GSC Sbjct: 183 VRGFLSVDAFLPAPGQGALALQTREGDTD-HAWVQAMNHGPTALCVAAERGAMVALEGSC 241 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR-----------CDAINIGRDAA 293 ++A+ A+ G L +LA DG + +A ++G Sbjct: 242 RTAVGAHAHIDGDRLTLTTEMLAPDGTARWRRAGEITLITAPDAPGRAMDNARDLGLRLG 301 Query: 294 QYIRFISNKN 303 + + Sbjct: 302 HEVHAAAGDQ 311 >gi|271962120|ref|YP_003336316.1| hydroxymethylbilane synthase [Streptosporangium roseum DSM 43021] gi|270505295|gb|ACZ83573.1| Hydroxymethylbilane synthase [Streptosporangium roseum DSM 43021] Length = 306 Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats. Identities = 98/302 (32%), Positives = 154/302 (50%), Gaps = 6/302 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S +A + + L ++ + ++ ++T GD +T LT++GG G+F Sbjct: 7 PLRLGTRRSLMATTQSGLVAARLTELT---GRAVELVGVTTFGD-VTKANLTQLGGTGVF 62 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + KLI GEID AVHS KD+PT + I+A PR+D RD +S L DL Sbjct: 63 VSALRDKLIDGEIDFAVHSLKDLPTTQDPRVVIAAIPPRDDPRDALVST--AKLADLPAG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S +GT S RR A L R D+ + RG +TR+ K+ + + ++LA AG+ RL +E Sbjct: 121 SKVGTGSPRRIAQLRVLRPDLEYVPIRGNADTRIGKVTSGELQGVVLAAAGLGRLGREAE 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I ++ +E+ P+PGQGA+ +E + E + V++ T +V ERA L L+ C Sbjct: 181 ISQVFEVEEMLPAPGQGALAVECRADRTDLIEFLSVLDDARTRAAVTAERAVLNALEAGC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + + ++ G L V+A DGK S G +++GRD A + + Sbjct: 241 AAPVGAYSADDGQNLILTAAVVAVDGKRAVRKSTAGTLSAPMDLGRDLAAEMIAEGAGTL 300 Query: 305 FN 306 Sbjct: 301 IG 302 >gi|168182770|ref|ZP_02617434.1| hydroxymethylbilane synthase [Clostridium botulinum Bf] gi|237794217|ref|YP_002861769.1| porphobilinogen deaminase [Clostridium botulinum Ba4 str. 657] gi|259647792|sp|C3L2Z3|HEM3_CLOB6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|182673912|gb|EDT85873.1| hydroxymethylbilane synthase [Clostridium botulinum Bf] gi|229263906|gb|ACQ54939.1| hydroxymethylbilane synthase [Clostridium botulinum Ba4 str. 657] Length = 290 Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats. Identities = 104/293 (35%), Positives = 154/293 (52%), Gaps = 6/293 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LA L H + + T GD+I +L +IGGKGLF Sbjct: 3 FIIATRRSKLAQVQTEIIIDLLNKKH---DIECEKLLIETVGDKILEVSLDKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL + Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLREGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L RSD+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I Sbjct: 120 KIGTSSRRRAAQLKLLRSDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ GQGA+ IE +PK +EL K ++H ++ V ERAF+ ELDG C Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPK-KELFKDLDHYNSKICVLAERAFMRELDGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 S I +A K + ++ GI + + G + +G A++I Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGIALAEHILK 289 >gi|285019346|ref|YP_003377057.1| hydroxymethylbilane synthase [Xanthomonas albilineans GPE PC73] gi|283474564|emb|CBA17065.1| probable hydroxymethylbilane synthase protein [Xanthomonas albilineans] Length = 302 Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats. Identities = 112/287 (39%), Positives = 159/287 (55%), Gaps = 2/287 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RI TR SPLAL + + L H P ++++P+ST+GD + +R+L IGGKGL Sbjct: 2 KILRIATRKSPLALWQSEYVAACLRRAH--PQLEVLLVPMSTRGDEVLDRSLAAIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++ G+ DCAVHS KD+P +L + +SA LPR D D IS+ +L L L Sbjct: 60 FLKELELAMLRGDADCAVHSLKDVPMELERPFVLSAILPRADSADALISNLYAALDALPL 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRR+A L R D+ ++D RG + TRL KL+N AI+LA AG++RL E+ Sbjct: 120 GARVGTSSLRRQAQLRARRPDLQLLDLRGNVNTRLAKLDNGDYDAIVLACAGLQRLGLER 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + L D+ P+P QGAI +E + A L V++ T V ERA L GS Sbjct: 180 RITQRLQAPDWLPAPAQGAIAVECRQDMAAACALFAVLDDVATRTCVEAERAMNRALHGS 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 C +A FA +G L G+V + D +G+ Sbjct: 240 CHVPVAAFAQWRGEDLLLQGLVGDVADGRLVRAQIQRSAQDPQALGQ 286 >gi|238563412|ref|ZP_00438929.2| hydroxymethylbilane synthase [Burkholderia mallei GB8 horse 4] gi|238520765|gb|EEP84222.1| hydroxymethylbilane synthase [Burkholderia mallei GB8 horse 4] Length = 393 Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 77 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 134 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 135 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 194 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 195 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 254 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC Sbjct: 255 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 314 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYIRFISN 301 + +A A +G L+ G V +DG H +R DA+ +GR + + Sbjct: 315 EVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGA 374 Query: 302 KNVFN 306 + + + Sbjct: 375 RAIVD 379 >gi|169779115|ref|XP_001824022.1| porphobilinogen deaminase [Aspergillus oryzae RIB40] gi|83772761|dbj|BAE62889.1| unnamed protein product [Aspergillus oryzae] Length = 342 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 105/320 (32%), Positives = 155/320 (48%), Gaps = 17/320 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K F +GTR S LAL+ S+L V+ P + I T GD T E K Sbjct: 16 SRKTFTVGTRKSKLALSQTDLVVSALKKVY--PNYEFKIHSQETAGDLNTTIAFREFTTK 73 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118 L+TEE+E+ L++G +D VHS KD+PT L + + RED RDV + SL Sbjct: 74 NLWTEELEEHLMAGNVDFIVHSLKDVPTTLPPACTLGPMMEREDSRDVLVIKQGLPNMSL 133 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGI 176 DL SV+GTSS+RR A L + VID RG I TRL KL+ I+LA AG+ Sbjct: 134 SDLPAGSVVGTSSIRRTAQLALKYPHLKVIDVRGNIGTRLAKLDAEDSPYTCIILAAAGL 193 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 RL + I + L+ ++ + GQGA+ IE ++ ++++ I H +T + ER Sbjct: 194 LRLGLDDRISQYLDSKNGGMLYAVGQGALGIEIRKDDQVMRDMLNNIGHNETTFASTAER 253 Query: 235 AFLAELDGSCKSAIAGFAYC----KGS-TLYFYGIVLASDGKIFHEVSRNGNRCD---AI 286 + L L+G C + + GS L IV++ DGK EV +G+ A Sbjct: 254 SLLRTLEGGCSAPLGVETEWIKSSDGSKKLRMRSIVVSVDGKESAEVEIDGSVDSVQAAE 313 Query: 287 NIGRDAAQYIRFISNKNVFN 306 + G A+ + + + Sbjct: 314 DFGVTVAKELVTKGAEKILE 333 >gi|57242140|ref|ZP_00370080.1| porphobilinogen deaminase [Campylobacter upsaliensis RM3195] gi|57017332|gb|EAL54113.1| porphobilinogen deaminase [Campylobacter upsaliensis RM3195] Length = 308 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 96/304 (31%), Positives = 149/304 (49%), Gaps = 6/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR SPLAL + L H + + STKGD + + L +IGGKGL Sbjct: 2 KKLIIATRKSPLALWQSEFVADILRKTH---GIEVHLEGFSTKGDILLDSPLAKIGGKGL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E ++ + AVHS KD+P+ L +GL ++A RED D +S + L L Sbjct: 59 FTKELENAMLENKAHLAVHSLKDVPSFLPQGLVLAALSVREDDTDALLSELYKDLNALPQ 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++ +GT+SLRRK LL R D+ +I+ RG + +RL +L + AI+LA AG+KRL E Sbjct: 119 NAKVGTTSLRRKMQLLSLRPDLHIINLRGNVNSRLKRLKGGEFDAIILASAGVKRLGLES 178 Query: 184 VIK--EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +K + ++ P+ QG + I++ + + L++ +N E + ER F+ L+ Sbjct: 179 EVKFIYRFSKDELVPAATQGILGIQS-PDKNEILTLLQCLNDEKSLIESTVERDFIRTLE 237 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I A G + I+ DG R + + G A Sbjct: 238 GGCQVPIGINAELMGEQITVRSILGLPDGSEILRDKRIILKKNYQGFGERLALEFIKRGA 297 Query: 302 KNVF 305 K + Sbjct: 298 KELL 301 >gi|238061239|ref|ZP_04605948.1| porphobilinogen deaminase [Micromonospora sp. ATCC 39149] gi|237883050|gb|EEP71878.1| porphobilinogen deaminase [Micromonospora sp. ATCC 39149] Length = 322 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 100/308 (32%), Positives = 163/308 (52%), Gaps = 11/308 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + + ++L + ++ + T GDR ++ + +G G+F Sbjct: 4 PLRLGTRGSALAIAQSGQVAAALTAAT---GREVELVEVVTAGDR-SSAPVHRLG-VGVF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L++ ID AVHS KD+PT GL I+A PR+D RD ++ ++L +L Sbjct: 59 VSALRDALVARTIDLAVHSYKDLPTAAASGLHIAAVPPRQDPRDALVAKGGRTLAELPPG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRLKKE 182 +V+GT +LRR A L + V RG ++TRL ++ + A++LA AG+ RL + Sbjct: 119 AVVGTGALRRIAQLHALGLQLEVTPIRGNVDTRLARVLGPDADLDAVVLARAGLARLGRT 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+P QGA+ +E ++P EL+ V++H + +V ERA LA L+ Sbjct: 179 DVITETLDPMLMLPAPAQGALAVECRADDPDLVELLAVLDHAPSRAAVTAERALLATLEA 238 Query: 243 SCKSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C + +A +A G +Y G V++SDG +SR G DA IG+ A + Sbjct: 239 GCSAPVAAYAELAEGDVGDEIYLRGAVISSDGTRDLRLSRTGTPADAAEIGKALAAELLE 298 Query: 299 ISNKNVFN 306 + ++ Sbjct: 299 LGADSILG 306 >gi|326472408|gb|EGD96417.1| porphobilinogen deaminase [Trichophyton tonsurans CBS 112818] gi|326481632|gb|EGE05642.1| porphobilinogen deaminase [Trichophyton equinum CBS 127.97] Length = 331 Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats. Identities = 100/321 (31%), Positives = 153/321 (47%), Gaps = 18/321 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K F IGTR S LA+ R +L V + P + GD L E K Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRDAL--VARWPDCEFNVHTRDAAGDLNKVTPLREFTSKN 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119 L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q +L Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPEACTLSAIMKREDPRDALVVKRGQPKTTLA 122 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177 +L SV+GTSS+RR A L R + VID RG I+TRL KL+ + I+LA AG+ Sbjct: 123 ELPAGSVVGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER Sbjct: 183 RSGHGDRIAQYLDSKNGKMLHAVGQGALGVEIRADDEKMVEMLREIGDQKTTFACLAERN 242 Query: 236 FLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAI 286 L L+G C + + KG L IV + DGK E+ ++ N A Sbjct: 243 LLRTLEGGCSAPLGVETEWVPDASGKGEMLRLRCIVTSIDGKEAVEIEKDCNVQTPEQAE 302 Query: 287 NIGRDAAQYIRFISNKNVFNF 307 G+ A + + Sbjct: 303 AFGKAVADEMVEKGAGKILEV 323 >gi|302662015|ref|XP_003022667.1| porphobilinogen deaminase Hem3, putative [Trichophyton verrucosum HKI 0517] gi|291186626|gb|EFE42049.1| porphobilinogen deaminase Hem3, putative [Trichophyton verrucosum HKI 0517] Length = 331 Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats. Identities = 98/321 (30%), Positives = 151/321 (47%), Gaps = 18/321 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K F IGTR S LA+ R +L V + P + GD L E K Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRDAL--VARWPDCEFNVHTRDAAGDLNKVTPLREFTSKN 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119 L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q +L Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPEACTLSAIMKREDPRDALVVKKGQPKMTLA 122 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177 +L SV+GTSS+RR A L R + VID RG I+TRL KL+ + I+LA AG+ Sbjct: 123 ELPAGSVVGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER Sbjct: 183 RSGHGDRIAQYLDSKNGKMLHAVGQGALGVEIRADDEKMAEMLREIGDQKTTFACLAERN 242 Query: 236 FLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAI 286 L L+G C + + G L IV + DGK E+ ++ A Sbjct: 243 LLRTLEGGCSAPLGVETEWVPDASGNGEMLRLRCIVTSIDGKEAVEIEKDCHVQAPEQAE 302 Query: 287 NIGRDAAQYIRFISNKNVFNF 307 G+ A + + Sbjct: 303 EFGKAVADEMVEKGAGKILEV 323 >gi|158520980|ref|YP_001528850.1| porphobilinogen deaminase [Desulfococcus oleovorans Hxd3] gi|226740631|sp|A8ZWG5|HEM3_DESOH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|158509806|gb|ABW66773.1| porphobilinogen deaminase [Desulfococcus oleovorans Hxd3] Length = 310 Score = 308 bits (790), Expect = 7e-82, Method: Composition-based stats. Identities = 107/303 (35%), Positives = 156/303 (51%), Gaps = 7/303 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LA+ L I+P+ T+GD++ N + +IG KG+FT Sbjct: 3 IRIGSRKSSLAMWQTCYVEDKLKQS----GITTSILPIDTRGDQVLNVAIAKIGSKGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKDLALH 124 EE+E KL G+ID AVHSAKDMP+ L G ++ A+ RE+ DV +SH + D + Sbjct: 59 EELEAKLADGDIDIAVHSAKDMPSVLPDGFELIAFTDREEPADVLVSHKKDLDISDSSRP 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IGTSS+RR+ALL R+ + +D RG ++TR+ K+ AIL+AYAGI R+ + + Sbjct: 119 VTIGTSSVRRQALLGRFYPHVRTVDIRGNVQTRVLKMKEGLCDAILMAYAGIHRMGMDDL 178 Query: 185 IKEILNIEDFPPSPGQGAICIET--HVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + + F P GQG I +E + K + + INH + + ERAFL L+G Sbjct: 179 IVHTFSPDTFIPPVGQGCIAVEASSRLAAEKKEAIRACINHPASETCLLAERAFLKRLEG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C A G L G +++ DGK F +R G A IG D ++ Sbjct: 239 GCSIPAFALARLNGDRLTLSGGLMSLDGKKFIFNTRAGAGSQATAIGTDLGNHVLENGGA 298 Query: 303 NVF 305 + Sbjct: 299 ALL 301 >gi|295687518|ref|YP_003591211.1| porphobilinogen deaminase [Caulobacter segnis ATCC 21756] gi|295429421|gb|ADG08593.1| porphobilinogen deaminase [Caulobacter segnis ATCC 21756] Length = 333 Score = 308 bits (790), Expect = 7e-82, Method: Composition-based stats. Identities = 120/317 (37%), Positives = 174/317 (54%), Gaps = 15/317 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIP----PHNIV----IIPLSTKGDRITNRT 54 + P RIG R S L+LA + ++ + P I +IP+ T GDRI +R Sbjct: 15 QPPIRIGARGSKLSLAQSGLMQARIAAALGAPAGASKEEIEAFAPLIPIVTSGDRIQDRR 74 Query: 55 LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT 114 L EIGGKGLFT+EIE+ L+ G IDCAVHS KDMP +L GL ++A RED RD FISH Sbjct: 75 LMEIGGKGLFTKEIEEALLDGRIDCAVHSLKDMPAELPPGLVLAATPEREDPRDAFISHV 134 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 + L+DL + +GT+SLRR+A L R D+ ++ RG ++TRL KL +A AILLA + Sbjct: 135 CERLEDLPKGARLGTASLRRQAQALHVRPDLEIVMLRGNVDTRLAKLERGEADAILLAQS 194 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G+ RL + K ++ + PP+PGQGA+ IET + A + + T +V ER Sbjct: 195 GLNRLGLGHLTKSWIDPDACPPAPGQGALVIETRAEDIGA-AWLDAVRCRPTTIAVAAER 253 Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG----KIFHEVSRNG--NRCDAINI 288 L L+GSC++AI A G+ L L +G + E++ +G + +A+ + Sbjct: 254 GALLALEGSCRTAIGARATLDGARLSMIVEALTPNGAQRFRRHGEITLSGGDDAGEALAL 313 Query: 289 GRDAAQYIRFISNKNVF 305 G +R + Sbjct: 314 GLKLGAEVRAEGGDAIL 330 >gi|332291690|ref|YP_004430299.1| porphobilinogen deaminase [Krokinobacter diaphorus 4H-3-7-5] gi|332169776|gb|AEE19031.1| porphobilinogen deaminase [Krokinobacter diaphorus 4H-3-7-5] Length = 304 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 97/304 (31%), Positives = 147/304 (48%), Gaps = 10/304 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A +S L + ++P+ + GD I ++ L E+G Sbjct: 1 MS-KTIRIGTRDSELALWQAKTVQSQLEAN----GYKTELVPVKSTGDLILDKPLYELGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ +++G +D AVHS KD+PT L G+ +A LPR + D+ + A D Sbjct: 56 TGIFTKTLDVAMLNGIVDIAVHSMKDVPTALPIGIVQAAVLPRAETEDILVHKGA---PD 112 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 I T SLRR+A L + D RG + TRL KL + + A AG+KR+ Sbjct: 113 YKQACTIATGSLRRQAQWLNRYPNHKTTDIRGNVNTRLQKLEESDWTGAIFAKAGLKRIN 172 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+L + P+P QGA+ I + E +NH+ T ER FL L Sbjct: 173 VLPENYEVL--DWMIPAPAQGAMLIVAMEEDQFCLEACATLNHKPTALCTYIEREFLKTL 230 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C + I A G + F G++ + DG EV + ++ +A+ G D A I Sbjct: 231 EGGCTAPIGALAEEIGDDIRFRGVLFSLDGATKIEVEQVVSKANAVGFGTDCALDILDDG 290 Query: 301 NKNV 304 + + Sbjct: 291 GREL 294 >gi|238578919|ref|XP_002388878.1| hypothetical protein MPER_12057 [Moniliophthora perniciosa FA553] gi|215450574|gb|EEB89808.1| hypothetical protein MPER_12057 [Moniliophthora perniciosa FA553] Length = 350 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 96/322 (29%), Positives = 147/322 (45%), Gaps = 17/322 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN----IVIIPLSTKGDRITNRTLTE 57 + F + +R S LA SL ++ ++T GD+ ++ L Sbjct: 7 ASRTFVLASRASQLAQIQTNMVLDSLKALYPDTTSESNPKFTTSFMTTAGDKNQSQALYL 66 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-- 115 +GGK L+T+E+E L+ E+D VHS KD+PT L +G I L RED D + Sbjct: 67 LGGKALWTKELEVALLEREVDMLVHSLKDVPTVLPEGCMIGGILEREDPVDSLVVKRGYE 126 Query: 116 ---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAIL 170 +SL DL SV+GTSS+RR A L R + D RG + TR+ KL + AI+ Sbjct: 127 DKWKSLDDLPEGSVVGTSSVRRVAQLKRNYPGLKFQDVRGNLNTRMAKLDAPDGPYAAII 186 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 LA AG+ RL + L + QGA+ +E N+ +A EL K I H++T Sbjct: 187 LAKAGMVRLGMGDRLTCDLAPPTLFHAVSQGALAVEIRNNDKEALELCKRITHQNTAWKC 246 Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGST---LYFYGIVLASDGKIFHEVSRNGN---RCD 284 + ERA L L+G C + ++ K L G V + DG E + + Sbjct: 247 SAERACLRVLEGGCSVPVGVSSFLKHDKELVLEISGCVTSLDGSTHVEHTLKEPVTSVEE 306 Query: 285 AINIGRDAAQYIRFISNKNVFN 306 A ++G A+ + + + + Sbjct: 307 AEDVGGRLARILIETGAREILD 328 >gi|327297350|ref|XP_003233369.1| porphobilinogen deaminase [Trichophyton rubrum CBS 118892] gi|326464675|gb|EGD90128.1| porphobilinogen deaminase [Trichophyton rubrum CBS 118892] Length = 331 Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats. Identities = 100/321 (31%), Positives = 153/321 (47%), Gaps = 18/321 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K F IGTR S LA+ R +L V + P + GD L E K Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRDAL--VARWPDCEFNVHTRDAAGDLNKITPLREFTSKN 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119 L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q +L Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPEACTLSAIMKREDPRDALVVKKGQPKTTLA 122 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177 +L SV+GTSS+RR A L R + VID RG I+TRL KL+ + I+LA AG+ Sbjct: 123 ELPAGSVVGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER Sbjct: 183 RSGHGDRIAQYLDSKNGKMLHAVGQGALGVEIRADDEKMVEMLREIGDQKTTFACLAERN 242 Query: 236 FLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAI 286 L L+G C + + KG L IV + DGK E+ ++ N A Sbjct: 243 LLRTLEGGCSAPLGVETEWVPDASGKGEMLRLRCIVTSIDGKEAVEIEKDCNVHTPEQAE 302 Query: 287 NIGRDAAQYIRFISNKNVFNF 307 G+ A + + Sbjct: 303 AFGKAVAGEMVEKGAGKILEV 323 >gi|319953182|ref|YP_004164449.1| porphobilinogen deaminase [Cellulophaga algicola DSM 14237] gi|319421842|gb|ADV48951.1| porphobilinogen deaminase [Cellulophaga algicola DSM 14237] Length = 524 Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats. Identities = 93/302 (30%), Positives = 149/302 (49%), Gaps = 8/302 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A + L + + V++P+ + GD + ++ L E+G Sbjct: 1 MS-KIIRIGTRDSELALWQARTVQKQLKEQ----GYQSVLVPVKSMGDLVLDKPLHELGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ ++ GEID AVHS KD+PT L KG+ +A L R + D+ + Sbjct: 56 TGVFTKTLDIAMLKGEIDIAVHSMKDVPTVLPKGIVQAAVLKRGNYMDILAFKHNEEFLS 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 +VI T SLRRKA L V+D RG ++TR +KL +N + + A AG++R+ Sbjct: 116 -QKEAVIATGSLRRKAQWLNRYPTHEVVDLRGNVQTRADKLEDNDWNGAIFAAAGLERVG 174 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E + + P+P QGA+ + ++ ++ +NH++T ER FL L Sbjct: 175 LEFENT--IGLTWMVPAPAQGAVVVVALEDDEFSKTACAELNHKETEICTTLERKFLNLL 232 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C + I A K + + G++L+ DGK EV N+ + + Sbjct: 233 EGGCTAPIGALAIIKDTNVSLKGVLLSVDGKKRIEVEFTSKLGKHENLAEACVERVFSRG 292 Query: 301 NK 302 K Sbjct: 293 GK 294 >gi|163754811|ref|ZP_02161933.1| porphobilinogen deaminase (hemC) [Kordia algicida OT-1] gi|161325752|gb|EDP97079.1| porphobilinogen deaminase (hemC) [Kordia algicida OT-1] Length = 526 Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats. Identities = 98/307 (31%), Positives = 156/307 (50%), Gaps = 9/307 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K+ RIGTR S LAL A + L H ++P+ GD + ++ L E+G Sbjct: 1 MSKR-IRIGTRDSELALWQAKVVQEQLE----FLGHKTELVPVKATGDLVLDKPLYELGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT ++ +++ +ID AVHS KD+PT L KG+ +A L R ++RD + + Sbjct: 56 TGIFTRTLDIAMLNNDIDIAVHSLKDVPTILPKGIVQAAVLKRGNVRDTLVFKNNEEFLS 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKRL 179 ++VI T SLRRKA L ++ D RG + TRL KL + + + + A AG+ R+ Sbjct: 116 -QRNAVIATGSLRRKAQWLHRYPTHTIEDLRGNVNTRLQKLADTEHWNGAIFAAAGLGRI 174 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 +E +N+E P+P QGAI I + + + + INHE+T + ER FL Sbjct: 175 GL--RPEESVNLEWMIPAPAQGAIMITALEADEEIRAICAEINHEETEICTSIERKFLNL 232 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C + I AY K + G++L++DG V+R + ++ + YI Sbjct: 233 LEGGCTAPIGAIAYIKDEVVTLEGVLLSTDGTKRIYVTRYEKLGEHHDLAEYCSNYIIER 292 Query: 300 SNKNVFN 306 K + + Sbjct: 293 GGKRLMD 299 >gi|315023924|gb|EFT36926.1| Porphobilinogen deaminase [Riemerella anatipestifer RA-YM] gi|325335710|gb|ADZ11984.1| Porphobilinogen deaminase [Riemerella anatipestifer RA-GD] Length = 306 Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats. Identities = 100/304 (32%), Positives = 155/304 (50%), Gaps = 8/304 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +IGTR SPLAL A E ++L + I+P+ + GD+ + L +G G Sbjct: 5 KNTIKIGTRNSPLALWQAKEVAAALEQK----NYATEIVPIVSSGDKNLTQPLYSLGITG 60 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT++++ L++ +ID AVHS KD+PT+L + + + AYL R+ +DV + + K L Sbjct: 61 VFTKDLDIALLNKQIDIAVHSLKDVPTQLPQNIALIAYLERDYPQDVLVRSSNAKDKSLE 120 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 I TSSLRR+A L+ + D RG ++TRL KL + A A L + AG+KR+ Sbjct: 121 E-LTIATSSLRRRAFWLKQFPNTKFSDIRGNVQTRLQKLEDGIADATLFSLAGLKRMAL- 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + E L +P QG + + H +N + E+VK INH T V ER FL L+G Sbjct: 179 DIPYEHLP--FMISAPSQGVVTVAGHTDNTEINEIVKTINHHQTQVCVEIERQFLNRLEG 236 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C + I FA + F G + + +GK E++ N G + A + K Sbjct: 237 GCTAPIGAFAEFNEEEIKFQGRLCSLNGKECLELNETFAWKQGRNFGNELADKLLANGGK 296 Query: 303 NVFN 306 + + Sbjct: 297 AIMD 300 >gi|170085353|ref|XP_001873900.1| predicted protein [Laccaria bicolor S238N-H82] gi|164651452|gb|EDR15692.1| predicted protein [Laccaria bicolor S238N-H82] Length = 342 Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats. Identities = 97/318 (30%), Positives = 143/318 (44%), Gaps = 14/318 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKI------PPHNIVIIPLSTKGDRITNRTLT 56 + F + +R S LA +S + P ++T GD+ ++ L Sbjct: 2 SRSFILASRESQLAQIQTNSVLASFQALFAANADSSSPTPTFRASFMTTAGDKNQSQALY 61 Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA- 115 +GGK L+T+E+E L +D VHS KD+PT L G + L RED D + Sbjct: 62 LLGGKALWTKELEVALKEHHVDMLVHSLKDVPTTLPDGCVLGGILEREDPVDSLVVKHGE 121 Query: 116 --QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILL 171 +SL +L SVIGTSS+RR A L R + +D RG + TRL KL A++L Sbjct: 122 RWKSLDELPSGSVIGTSSVRRIAQLKRKYPHLKFMDVRGNLNTRLAKLDAPEGPYSALIL 181 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ RL I L + QGA+ IE ++ +A EL + + H +T Sbjct: 182 AKAGLVRLGMGDRITLDLTPPTLFYAVSQGALGIEVRSDDVEALELCERLTHRETQLKCL 241 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINI 288 ERA L L+G C + + +G L G V A DG+ E + N DA + Sbjct: 242 AERACLRVLEGGCSVPVGVASQLEGGVLSLSGCVTAIDGESHVEHKLEEKVENAEDAEKV 301 Query: 289 GRDAAQYIRFISNKNVFN 306 G A+ + K + + Sbjct: 302 GTKLAKILLDSGAKKILD 319 >gi|167618302|ref|ZP_02386933.1| porphobilinogen deaminase [Burkholderia thailandensis Bt4] Length = 278 Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats. Identities = 103/266 (38%), Positives = 153/266 (57%), Gaps = 2/266 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMELPTGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARYPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++ED P+ GQGA+ IE + ++ T +V ERA L GSC Sbjct: 191 IRALLDVEDSLPAAGQGALGIEIAAGRADVAAWLAPLHDHATALAVEAERAVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG 270 + +A A +G L+ G V +DG Sbjct: 251 EVPLAAHAVWRGDELHLTGSVSTTDG 276 >gi|159036094|ref|YP_001535347.1| porphobilinogen deaminase [Salinispora arenicola CNS-205] gi|157914929|gb|ABV96356.1| porphobilinogen deaminase [Salinispora arenicola CNS-205] Length = 322 Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats. Identities = 97/308 (31%), Positives = 158/308 (51%), Gaps = 11/308 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + + +L P + ++ + T GDR + + +G G+F Sbjct: 4 PLRLGTRGSALAMAQSGQVAQALTAATGNP---VELVEVVTAGDR-SAAPVHRLG-VGVF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L + ID AVHS KD+PT GL ++A PR+D RD ++ ++L +L Sbjct: 59 VSALRDALTARTIDFAVHSFKDLPTAAAPGLHVAAVPPRQDPRDALVARAGRTLAELPPG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRLKKE 182 + +GT +LRR A L + V RG + TRL ++ +A A++LA AG+ RL + Sbjct: 119 ARVGTGALRRIAQLHALGLQLDVQPIRGNVGTRLARVLGPEADLDAVVLARAGLARLDRT 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E L+ P+P QGA+ +E ++ EL+ V++H + +V ERA LA L+ Sbjct: 179 DTITETLDPMLMLPAPAQGALAVECRSDDSDLVELLAVLDHAPSRATVVAERALLATLEA 238 Query: 243 SCKSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C + +A +A G +Y G V++ DG +SR G DA+ IG+ A + Sbjct: 239 GCSAPVAAYAELAEGDVGEEIYLRGAVISPDGTRDLRLSRTGTPADAVEIGKALAADLLE 298 Query: 299 ISNKNVFN 306 + ++ Sbjct: 299 LGADSILG 306 >gi|319943887|ref|ZP_08018168.1| hydroxymethylbilane synthase [Lautropia mirabilis ATCC 51599] gi|319743120|gb|EFV95526.1| hydroxymethylbilane synthase [Lautropia mirabilis ATCC 51599] Length = 315 Score = 308 bits (789), Expect = 9e-82, Method: Composition-based stats. Identities = 104/299 (34%), Positives = 156/299 (52%), Gaps = 7/299 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RI TR S LAL A L H P + ++ ++T+GD+I +R L EIGGKGLF Sbjct: 9 PLRIATRESRLALWQANHVAELLRARH--PAAGVALLGMTTRGDQILDRPLAEIGGKGLF 66 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E L G + AVHS KD+P L +G ++A + R D RD F+S SL +L Sbjct: 67 TKELEVALFDGRAELAVHSLKDVPMDLPEGFDLAAVMTRADARDAFVSTRYASLDELPPD 126 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR A L + RG ++TRL KL+ + AI+LA AG+ RL Sbjct: 127 AVVGTSSLRRAAQLQARHPGFRIQPLRGNLDTRLGKLDAGQYDAIVLAAAGLTRLGLADR 186 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I++ L +++ P+PGQG + IE + ++ + +N + ERA +L G+C Sbjct: 187 IRQYLPLDEMLPAPGQGMLGIEIRADRDDVRQALAFLNDPEAARIAAAERAVSRQLGGNC 246 Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAIN---IGRDAAQYIRFI 299 K+ +A A + ++ DG+I V+R G D +G A ++ Sbjct: 247 KTPLAAHARFTASGQMQLDALLADDDGRIA-RVTRVGKVADPKEARVMGEAVAAELKAQ 304 >gi|313206850|ref|YP_004046027.1| porphobilinogen deaminase [Riemerella anatipestifer DSM 15868] gi|312446166|gb|ADQ82521.1| porphobilinogen deaminase [Riemerella anatipestifer DSM 15868] Length = 303 Score = 308 bits (789), Expect = 9e-82, Method: Composition-based stats. Identities = 100/304 (32%), Positives = 155/304 (50%), Gaps = 8/304 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +IGTR SPLAL A E ++L + I+P+ + GD+ + L +G G Sbjct: 2 KNTIKIGTRNSPLALWQAKEVAAALEQK----NYATEIVPIVSSGDKNLTQPLYSLGITG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT++++ L++ +ID AVHS KD+PT+L + + + AYL R+ +DV + + K L Sbjct: 58 VFTKDLDIALLNKQIDIAVHSLKDVPTQLPQNIALIAYLERDYPQDVLVRSSNAKDKSLE 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 I TSSLRR+A L+ + D RG ++TRL KL + A A L + AG+KR+ Sbjct: 118 E-LTIATSSLRRRAFWLKQFPNTKFSDIRGNVQTRLQKLEDGIADATLFSLAGLKRMAL- 175 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + E L +P QG + + H +N + E+VK INH T V ER FL L+G Sbjct: 176 DIPYEHLP--FMISAPSQGVVTVAGHTDNTEINEIVKTINHHQTQVCVEIERQFLNRLEG 233 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C + I FA + F G + + +GK E++ N G + A + K Sbjct: 234 GCTAPIGAFAEFNEEEIKFQGRLCSLNGKECLELNETFAWKQGRNFGNELADKLLANGGK 293 Query: 303 NVFN 306 + + Sbjct: 294 AIMD 297 >gi|315044601|ref|XP_003171676.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893] gi|311344019|gb|EFR03222.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893] Length = 335 Score = 308 bits (789), Expect = 9e-82, Method: Composition-based stats. Identities = 98/324 (30%), Positives = 156/324 (48%), Gaps = 21/324 (6%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K F IGTR S LA+ R++L+ + P + GD L E+ K Sbjct: 6 RKTFTIGTRKSNLAVLQTEIVRNALIA--RWPDCQFNVHTRDAAGDLNKVTPLRELTSKN 63 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119 L+TEE+E+ L++ E+D VHS KD+PT++ + ++ A++ RED RD + Q +L Sbjct: 64 LWTEELEEMLLAKELDLVVHSLKDVPTQIPEACKLGAFMKREDPRDALVVKKGQPKTTLA 123 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177 +L SV+GTSS+RR A + R + VID RG I+TRL KL+ + I+LA AG+ Sbjct: 124 ELPAGSVVGTSSVRRTAQIGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 183 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R E I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER Sbjct: 184 RTGYEDRISQYLDSKNGKMLHAVGQGALGVEIRADDEKMVEMLREIGDQKTTFACLAERN 243 Query: 236 FLAELDGSCKSAIAGFAYC---------KGSTLYFYGIVLASDGKIFHEVSRNG---NRC 283 L L+G C + + KG L IV + DG+ EV ++ Sbjct: 244 LLRTLEGGCSAPLGVETEWVPDASDASGKGELLRLRCIVTSVDGREAVEVEKDCGVQTPE 303 Query: 284 DAINIGRDAAQYIRFISNKNVFNF 307 A G+ A + + Sbjct: 304 QAEAFGKAVADEMVEQGAGKILEV 327 >gi|289423443|ref|ZP_06425247.1| hydroxymethylbilane synthase [Peptostreptococcus anaerobius 653-L] gi|289156201|gb|EFD04862.1| hydroxymethylbilane synthase [Peptostreptococcus anaerobius 653-L] Length = 307 Score = 308 bits (789), Expect = 9e-82, Method: Composition-based stats. Identities = 104/301 (34%), Positives = 154/301 (51%), Gaps = 9/301 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +GTR S LA+ ++ ++ I +STKGDRI +++L +IG KG+F Sbjct: 2 KLIVGTRGSKLAVTQTKIVVDAIKS--NFENIDVDIKIISTKGDRILDKSLDKIGDKGIF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA-- 122 T+EIE++LI GEID A+HS KDMP++L +GL ++ + RED RD+ I ++ D Sbjct: 60 TQEIERQLIEGEIDFAIHSLKDMPSELGEGLVLTKTIQREDPRDLLILNSKFKKIDDPIK 119 Query: 123 -----LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 IGT S RR A LL ++ + RG I+TRL K+ AI+LA AG+ Sbjct: 120 WLKENDGMRIGTGSKRRSAQLLNINPNLKIDLIRGNIDTRLEKMEKESYDAIVLAAAGVN 179 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RLK + + +L+ P+ GQGA+ IE N + + + I+ + V ER +L Sbjct: 180 RLKMDWINSYVLDEGSMIPAVGQGALAIEIKEGNQELVNIFEAISDDIANVCVEAERTYL 239 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 A ++G C + A L GI + D K+ S G DA IGR+ A I Sbjct: 240 ATINGGCHMPVGALAQVNEGKLCLKGIYGSEDCKLIISSSLEGPLEDAQRIGRELADKIL 299 Query: 298 F 298 Sbjct: 300 R 300 >gi|302543510|ref|ZP_07295852.1| hydroxymethylbilane synthase [Streptomyces hygroscopicus ATCC 53653] gi|302461128|gb|EFL24221.1| hydroxymethylbilane synthase [Streptomyces himastatinicus ATCC 53653] Length = 322 Score = 308 bits (789), Expect = 9e-82, Method: Composition-based stats. Identities = 95/313 (30%), Positives = 159/313 (50%), Gaps = 17/313 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + ++ ++ P + ++ ++T GD ++ L +IGG G+F Sbjct: 8 PLRLGTRRSALAMAQSGLIADAVRELTGRP---VELVEITTYGD-VSREQLAQIGGTGVF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L+SGEID AVHS KD+PT +GL ++A RED RD I+ + + L Sbjct: 64 VSALREALLSGEIDFAVHSLKDLPTAEPEGLTLAAIPRREDPRDALIARDGLTFEQLPPG 123 Query: 125 SVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + IGT S RR A L W D+ + RG + TR+ + + + A++LA AG+ RL Sbjct: 124 ARIGTGSPRRAAQLNAWARSVGLDVETVPIRGNVGTRIGYVRSGELDAVVLAAAGLSRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + EIL+ + P+PGQGA+ +E ++ + L+ ++ T +V ER+ LA L Sbjct: 184 RIGEATEILDADHVLPAPGQGALAVECAADDAELTALLAGLDDPHTRAAVTAERSLLAAL 243 Query: 241 DGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGN----RCDAINIGRD 291 + C + + A G + G+V +DG ++S G A ++GR+ Sbjct: 244 EAGCSAPVGALADLLGDGQVVTEMRLRGVVGTTDGTTLVQLSTTGPVPASPDQAADLGRE 303 Query: 292 AAQYIRFISNKNV 304 A + + Sbjct: 304 LAAEMLAKGAAGL 316 >gi|161486849|ref|NP_781392.2| porphobilinogen deaminase [Clostridium tetani E88] Length = 290 Score = 308 bits (789), Expect = 9e-82, Method: Composition-based stats. Identities = 101/292 (34%), Positives = 149/292 (51%), Gaps = 6/292 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 + TR S LA + + + + + T GD+I +RTL +IGGKGLF Sbjct: 2 KLIVATRRSILAQTQTDLVIKKIEEDN---EVKCEKLLIQTLGDKILDRTLDKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIEK L+ G+ AVHS KD+P ++ I A RED+RD F+S +L Sbjct: 59 IKEIEKALLDGKAHMAVHSMKDVPYEVPSMFYIGAIPRREDVRDAFVSRDGTKFMELPSG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S IGTSS RR + + R D+ V+ RG ++TRL K+ +LA AG+KRL E+V Sbjct: 119 SKIGTSSRRRSSQIKILRPDVEVVPIRGNVQTRLRKIEEMNLAGTILAVAGLKRLNMEEV 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + + E+ P+ GQGA+ IE + +K I+HE+T V ER+F+ L G C Sbjct: 179 ITDYFSPEEMVPAIGQGALGIEI-KKYEDVIDYIKGIDHEETRICVEGERSFMEALKGDC 237 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 S I A + +Y G + +GKI + G + + +G+ A I Sbjct: 238 HSTIGAHAIVENDLMYMTG-IFEVNGKIVKKD-IEGKKENYKQLGKTLADRI 287 >gi|126348046|emb|CAJ89766.1| putative porphobilinogen deaminase [Streptomyces ambofaciens ATCC 23877] Length = 311 Score = 308 bits (789), Expect = 9e-82, Method: Composition-based stats. Identities = 101/304 (33%), Positives = 148/304 (48%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT Sbjct: 7 IRIVSRDSPMALAQVERVRAGLAALH--PGVRTEVVPVKTTGDKWLGD-LSQVEGKGAFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L+S E D AVH KD+P L G +A+L R+D+RD I +L +L Sbjct: 64 KEVDAALLSDEADLAVHCVKDVPADRPLPAGTVFAAFLERDDVRDALIHPDGLTLDELPA 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSS+RR A L + + FRG RL KL +A A+LLA AG++R+ + Sbjct: 124 GTRVGTSSVRRVAQLAATHPHLRCVPFRGNANRRLAKLAAGEADALLLAVAGLERIGRRD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI E+L+ E P G G + ++ + E V + H T + ER FL L G Sbjct: 184 VISEVLSPETMMPPIGAGILALQCREGDTDLIEAVSGLGHPATHREASAERMFLHVLQGH 243 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG+A G L V DGK R D +G A + + Sbjct: 244 CNSPIAGYARVDRGGELSLRACVFTPDGKTRLNAHEWAGRLDPATLGTSVAVALLRQGAR 303 Query: 303 NVFN 306 + + Sbjct: 304 EIID 307 >gi|197106866|ref|YP_002132243.1| porphobilinogen deaminase [Phenylobacterium zucineum HLK1] gi|238058996|sp|B4RC21|HEM3_PHEZH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|196480286|gb|ACG79814.1| porphobilinogen deaminase [Phenylobacterium zucineum HLK1] Length = 320 Score = 308 bits (789), Expect = 9e-82, Method: Composition-based stats. Identities = 116/320 (36%), Positives = 173/320 (54%), Gaps = 16/320 (5%) Query: 1 MEKKPF-RIGTRCSPLALAHAFETRSSLMDVHKIPPH---NIV----IIPLSTKGDRITN 52 M +P RIG R S L+L + + + + P + +IP++T GDR+ + Sbjct: 1 MPTQPVVRIGARGSKLSLTQSGIVQRRIAAALGVDPDNAAEVERVAPLIPITTTGDRVQD 60 Query: 53 RTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS 112 R L EIGGKGLFT+EIE+ L+ G IDCAVHS KDMP +L +GL I+A RED RD FIS Sbjct: 61 RRLLEIGGKGLFTKEIEEALMDGRIDCAVHSMKDMPAELPEGLCIAAIPEREDPRDAFIS 120 Query: 113 HTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLA 172 + L+DL +++GT+SLRR+A L R D+ RG +ETRL KL + AILLA Sbjct: 121 RGPERLEDLTEGAILGTASLRRQAQCLHRRPDLEAKLLRGNVETRLGKLEAGEYDAILLA 180 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 Y+G++RL + K +++ ++ PP+PGQGA+ +ET + + + T +V Sbjct: 181 YSGLRRLGLGHLPKSLIDPKEAPPAPGQGALAVETRAADRDL-PWAQALRCRPTTLAVAA 239 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-------A 285 ER L L+GSC++ I A+ +G T L+ DGK+ S A Sbjct: 240 ERGALIALEGSCRTPIGAHAWLEGGTCKLIVEALSPDGKLRFRHSGEAELSQMADPEASA 299 Query: 286 INIGRDAAQYIRFISNKNVF 305 ++G ++ + + Sbjct: 300 RDLGLSLGLAVKEEAGDAIV 319 >gi|302535112|ref|ZP_07287454.1| porphobilinogen deaminase [Streptomyces sp. C] gi|302444007|gb|EFL15823.1| porphobilinogen deaminase [Streptomyces sp. C] Length = 322 Score = 307 bits (788), Expect = 9e-82, Method: Composition-based stats. Identities = 84/314 (26%), Positives = 153/314 (48%), Gaps = 17/314 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P R+GTR S LA++ + ++ + P + ++ ++T GD ++ L +IGG G+ Sbjct: 7 QPLRLGTRRSKLAMSQSGHVAEAVRAITGRP---VELVEITTYGD-VSRENLAQIGGTGV 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F + L+ GE+D AVHS KD+PT L I+A RED RD ++ + + L Sbjct: 63 FVTALRDALVRGEVDFAVHSLKDLPTAQPDELVIAAMPKREDPRDALVARDGLTFEQLPD 122 Query: 124 HSVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 + +GT S RR A L + + RG ++TR+ + + + A++LA AG+ R+ Sbjct: 123 GARVGTGSPRRMAQLNAYARSLGKSVETVAIRGNVDTRIGFVRSGELDAVVLAAAGLNRI 182 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++L++++ P+PGQGA+ +E ++ + ++ T +V ERA LA Sbjct: 183 GRADEATDLLSVDNVLPAPGQGALAVECLASDADLISALGRLDDPHTRAAVTAERALLAA 242 Query: 240 LDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGR 290 L+ C + + A + G+V DG ++S G +A+ +GR Sbjct: 243 LEAGCSAPVGALADLLADGQIVNEMRLRGVVGTLDGSTLVQLSTTGPVPQSYDEAMALGR 302 Query: 291 DAAQYIRFISNKNV 304 + A + + Sbjct: 303 ELADEMLAKGAAGL 316 >gi|195170703|ref|XP_002026151.1| GL16182 [Drosophila persimilis] gi|194111031|gb|EDW33074.1| GL16182 [Drosophila persimilis] Length = 630 Score = 307 bits (788), Expect = 9e-82, Method: Composition-based stats. Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 24/301 (7%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH----NIVIIPLSTKGDRITNRTLTE 57 ++K R+G+R S LAL + P I +ST GDR+ N +L + Sbjct: 4 QEKVIRVGSRKSELALIQTKHV------IGPTPELYLKQRFEIHTMSTFGDRVLNVSLPK 57 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---T 114 IG K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + Sbjct: 58 IGEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFQ 117 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLA 172 ++ L SVIGTSSLRR A + R + V D RG + TRL KL+ +++ I+LA Sbjct: 118 GHTIASLPQGSVIGTSSLRRTAQIRRLYPHLIVCDIRGNLNTRLAKLDAADSRFAGIILA 177 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 AG+ R+ I ++L D + GQGA+ +E N+ + +++ + +T + Sbjct: 178 QAGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDVQVLAMLQKLMCLNTTCRILA 237 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRC 283 ER+FL L G C + +A ++ +G L G V + DG I + Sbjct: 238 ERSFLKTLGGGCSAPVAVWSNLQGEPLNANSQDVGLSLTGAVWSLDGAIEIRNHLSCALS 297 Query: 284 D 284 + Sbjct: 298 E 298 >gi|296809948|ref|XP_002845312.1| porphobilinogen deaminase [Arthroderma otae CBS 113480] gi|238842700|gb|EEQ32362.1| porphobilinogen deaminase [Arthroderma otae CBS 113480] Length = 330 Score = 307 bits (788), Expect = 9e-82, Method: Composition-based stats. Identities = 99/320 (30%), Positives = 151/320 (47%), Gaps = 17/320 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K F IGTR S LA+ R++L V + P + GD L E K Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRNAL--VARWPDCEFNVHTRDAAGDLNKITPLREFTSKN 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119 L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q +L Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPETCTLSAIIKREDPRDALVVKKGQPNMTLA 122 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177 +L SVIGTSS+RR A L R + VID RG I+TRL KL+ + I+LA AG+ Sbjct: 123 ELPAGSVIGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182 Query: 178 RLKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R I + L+ + + GQGA+ +E + + E+++ I + T + ER Sbjct: 183 RTGHGYRISQYLDSKNGQMLHAVGQGALGVEIRAGDARMIEMLREIGDQKTTFACLAERN 242 Query: 236 FLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNGN---RCDAIN 287 L L+G C + + T L IV + DGK E ++G+ A Sbjct: 243 LLRTLEGGCSAPLGVETEWVQDTDGKEMLRLRCIVTSIDGKEAVETEKDGDVQTPEQAEA 302 Query: 288 IGRDAAQYIRFISNKNVFNF 307 G+ A + + Sbjct: 303 FGKAVADEMVGKGAGKILEV 322 >gi|239929697|ref|ZP_04686650.1| porphobilinogen deaminase [Streptomyces ghanaensis ATCC 14672] gi|291438017|ref|ZP_06577407.1| porphobilinogen deaminase 1 [Streptomyces ghanaensis ATCC 14672] gi|291340912|gb|EFE67868.1| porphobilinogen deaminase 1 [Streptomyces ghanaensis ATCC 14672] Length = 319 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 91/317 (28%), Positives = 156/317 (49%), Gaps = 17/317 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K R+GTR S LA+A + + ++ V P + ++P++T GD + L +IGG Sbjct: 1 MTEKALRLGTRRSKLAMAQSGQVAEAVRQVTGRP---VELVPITTYGDT-SREHLAQIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L GE+D AVHS KD+PT L ++A RED RDV + D Sbjct: 57 TGVFVAALREALARGEVDFAVHSLKDIPTTQPDELVVAAIPVREDPRDVMVGRDVPKFTD 116 Query: 121 LALHSVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + IGT S RR A L +I + RG ++TR+ + + + A++LA AG+ Sbjct: 117 LPRGARIGTGSPRRMAQLNAYARAHGMEIETVPIRGNVDTRIGYVRSGELDAVVLAAAGM 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ + + + + L+++ P+PGQGA+ +E +N + ++ T +V ER+ Sbjct: 177 NRVGRSEEVTDFLSVDTVLPAPGQGALAVECTADNAPLIAALAELDDPLTRAAVTAERSL 236 Query: 237 LAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNRCD----AIN 287 LA L+ C + + A G + G+V +DG ++S G + A+ Sbjct: 237 LAALEAGCSAPVGALADLLGDGQTVKEMRLRGVVGTTDGTKLVQLSTTGPVPETHEAAMA 296 Query: 288 IGRDAAQYIRFISNKNV 304 +G + A + + Sbjct: 297 LGSELATEMLAQGAAGL 313 >gi|319956650|ref|YP_004167913.1| hydroxymethylbilane synthase [Nitratifractor salsuginis DSM 16511] gi|319419054|gb|ADV46164.1| hydroxymethylbilane synthase [Nitratifractor salsuginis DSM 16511] Length = 317 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 95/301 (31%), Positives = 153/301 (50%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LAL A+ + + P + ++ ++++GD+I +R L +GGKG F Sbjct: 3 KLTIVTRASQLALWQAYHIKDRIEKAR--PELEVELMEITSRGDKILDRPLALVGGKGHF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E ++++G AVHS KD+PT + +GL+++A R+D DVF+SH SL+ L Sbjct: 61 TKELEDEMLAGRAQMAVHSLKDVPTFIPEGLELAAITERQDQSDVFLSHRFSSLEALPEG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GT+SLRR+ LL+ R D+ V D RG + TRL KL + AI+LAY G+ RL K Sbjct: 121 AVVGTTSLRRRMQLLQRRPDLIVKDLRGNVNTRLRKLAEGQYDAIILAYIGLARLDLLKE 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + +E P GQ A+ IE + + + L ++ +T ER F+A + C Sbjct: 181 IPHVQKLEWMIPPMGQAALGIEILSGDEELRHLAMELDDPETHLCTEIEREFVAAVGAGC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A A L ++ D +A G+ A+ + + Sbjct: 241 SAPVAVNARIIDGELDLRAMLGYPDASEVLYEELVLPMEEATGAGKRLAEKMIADGALEL 300 Query: 305 F 305 Sbjct: 301 L 301 >gi|238916686|ref|YP_002930203.1| hydroxymethylbilane synthase [Eubacterium eligens ATCC 27750] gi|259647796|sp|C4Z552|HEM3_EUBE2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238872046|gb|ACR71756.1| hydroxymethylbilane synthase [Eubacterium eligens ATCC 27750] Length = 295 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 101/294 (34%), Positives = 149/294 (50%), Gaps = 7/294 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +RIGTR S LAL + + + + + P ++ + T GD++T++ L IG KG F Sbjct: 3 YRIGTRGSKLALVQSEYVKRRMEEAY--PEDTFELVIIKTTGDKVTDKPLAAIGTKGFFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+SG ID AVHS KDMP + GL + RED RDV I TA S +L + Sbjct: 61 KEIEEALLSGSIDMAVHSMKDMPAECAAGLTFAKAWKREDCRDVLILKTAGSFSELPSGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLKKEK 183 VIGT SLRR L R DI RG ++TR+NKL ++ I+LA AG+ RL + Sbjct: 121 VIGTGSLRRACQLAMLRPDIQFTAIRGNVDTRINKLMDDSYGLDGIVLAAAGLNRLGRSS 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I E L+ E P+P QG + IET N + + + ++ +++ ER FL G Sbjct: 181 EITEYLDPEVVIPAPAQGVLAIETAEVNTELLDKINALSDDNSDREAVAERTFLRLTGGG 240 Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C + + K L + D + G D+ +G +AA+ + Sbjct: 241 CHAPVGAHCVTKDNGDLRMVVLFGNDDCSRILRIEVTGT--DSEAVGHEAARML 292 >gi|134281147|ref|ZP_01767856.1| porphobilinogen deaminase [Burkholderia pseudomallei 305] gi|134247453|gb|EBA47538.1| porphobilinogen deaminase [Burkholderia pseudomallei 305] Length = 329 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYIRFISN 301 + +A A +G L+ G V +DG H +R DA+ +GR + + Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGA 310 Query: 302 KNVFN 306 + + + Sbjct: 311 RAIVD 315 >gi|190570895|ref|YP_001975253.1| porphobilinogen deaminase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019411|ref|ZP_03335217.1| porphobilinogen deaminase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357167|emb|CAQ54582.1| porphobilinogen deaminase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212994833|gb|EEB55475.1| porphobilinogen deaminase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 292 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 112/295 (37%), Positives = 161/295 (54%), Gaps = 8/295 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LAL A E + L++ P ++ II + T GD+ N TL EIGGKGLF Sbjct: 3 VKIGTRGSDLALIQALEAKQRLLE--SFPNLSVEIIKIKTSGDKYANVTLAEIGGKGLFL 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EIE +L+ ID AVHS KD+P K L I L R DVFISH +SLK L + Sbjct: 61 REIEAELLKNNIDMAVHSLKDVPAFFSKDLTIPCVLERLSPCDVFISHKYKSLKTLPQQA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 I TSS+RRK LL R D++V+ RG + TR L N ++LA AG+ RLKK +I Sbjct: 121 TIATSSIRRKVQLLNLRPDLNVVPLRGNVTTR---LQNQNFDGMILAEAGLIRLKKYHLI 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L + + GQG ICI+ N+ K +L++ IN+ ++ ER+F+ ++GSC Sbjct: 178 TEVLPPKVMLSAVGQGTICIQCRKNDIKVIDLLEKINNNMSFIRAKSERSFMKTVNGSCF 237 Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + +A A + L+ Y ++ ++ + R DA +G DA ++ Sbjct: 238 TPLAALAEYVSENMLHLYCMLAGE--RVIYFTERTSFVEDAEKMGMDAGLELKSK 290 >gi|332016383|gb|EGI57296.1| Porphobilinogen deaminase [Acromyrmex echinatior] Length = 358 Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats. Identities = 102/277 (36%), Positives = 155/277 (55%), Gaps = 7/277 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+G+R S LAL L ++H P I+ ++TKGD+I +++L +IG K LFT Sbjct: 10 IRVGSRKSELALIQTKHVIQCLKEIH--PKKEFEIVTMNTKGDKILDKSLPKIGEKSLFT 67 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLA 122 EE+E L +G +D VHS KD+PT L G+ + A L RED RD + ++L L Sbjct: 68 EELELALENGSVDFVVHSLKDLPTILPVGMALGAILKREDPRDAVVMSKKFKDKTLSTLP 127 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIKRLK 180 SVIGTSSLRR A LLR + + + RG + TRL KLN+ AI+LA AG+KR+ Sbjct: 128 KDSVIGTSSLRRSAQLLRNMPHLKIENIRGNLNTRLKKLNDENGPYAAIILAAAGLKRMG 187 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++L +E+ + GQGA+ +E ++ K + +++ + + + CER+FL L Sbjct: 188 WEDKISQLLELEEALYAVGQGALGVECRESDWKIRSILEPLFDLEATLTCVCERSFLKTL 247 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277 G C + +A + K + L G V + DG+ + Sbjct: 248 GGGCSAPVAVSSSLKKNELTITGAVWSLDGQTLITDT 284 >gi|167644091|ref|YP_001681754.1| porphobilinogen deaminase [Caulobacter sp. K31] gi|189042878|sp|B0T287|HEM3_CAUSK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|167346521|gb|ABZ69256.1| porphobilinogen deaminase [Caulobacter sp. K31] Length = 318 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 118/316 (37%), Positives = 170/316 (53%), Gaps = 12/316 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDV-HKIPPHNI----VIIPLSTKGDRITNRTL 55 M ++P RIG R S L+LA + ++ + P +I +IP+ T GDRI +R L Sbjct: 1 MSRQPIRIGARGSKLSLAQSGLMQARIAAALGAGPGDDIDAFAQLIPIVTSGDRIQDRRL 60 Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115 EIGGKGLFT+EIE+ L+ G IDCA+HS KDMP +L GL ++A RED RD FISH A Sbjct: 61 MEIGGKGLFTKEIEEALLDGRIDCAIHSLKDMPAELPPGLVLAAVPEREDPRDAFISHVA 120 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 + L+DL+ + +GT+SLRR+A L R D+ ++ RG ++TRL KL +A AILLA +G Sbjct: 121 ERLEDLSKGARLGTASLRRQAQALHVRPDLEIVMLRGNVDTRLAKLERGEADAILLAQSG 180 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + RL + L+ PP+PGQGA+ IET + ++ + + T +V ER Sbjct: 181 LNRLGLGHITNSWLDPLAAPPAPGQGALVIETRAEDVDL-PWLQAVRCQATTLAVAAERG 239 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN------RCDAINIG 289 L L+GSC++A+ A G L L DG + A +G Sbjct: 240 ALYALEGSCRTAVGAHARLDGLILTMIVEALTPDGVQRFRREGSATLSSLDAADQARALG 299 Query: 290 RDAAQYIRFISNKNVF 305 + +R + Sbjct: 300 LELGGAVRAEGGPALI 315 >gi|53718657|ref|YP_107643.1| porphobilinogen deaminase [Burkholderia pseudomallei K96243] gi|53725180|ref|YP_102499.1| porphobilinogen deaminase [Burkholderia mallei ATCC 23344] gi|76808885|ref|YP_332640.1| porphobilinogen deaminase [Burkholderia pseudomallei 1710b] gi|121600693|ref|YP_993593.1| porphobilinogen deaminase [Burkholderia mallei SAVP1] gi|124386445|ref|YP_001028944.1| porphobilinogen deaminase [Burkholderia mallei NCTC 10229] gi|126449020|ref|YP_001081141.1| porphobilinogen deaminase [Burkholderia mallei NCTC 10247] gi|126455102|ref|YP_001065357.1| porphobilinogen deaminase [Burkholderia pseudomallei 1106a] gi|167003503|ref|ZP_02269289.1| hydroxymethylbilane synthase [Burkholderia mallei PRL-20] gi|167901767|ref|ZP_02488972.1| porphobilinogen deaminase [Burkholderia pseudomallei NCTC 13177] gi|217419743|ref|ZP_03451249.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 576] gi|226194325|ref|ZP_03789923.1| hydroxymethylbilane synthase [Burkholderia pseudomallei Pakistan 9] gi|237811340|ref|YP_002895791.1| hydroxymethylbilane synthase [Burkholderia pseudomallei MSHR346] gi|242316542|ref|ZP_04815558.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 1106b] gi|254178350|ref|ZP_04885005.1| porphobilinogen deaminase [Burkholderia mallei ATCC 10399] gi|254190785|ref|ZP_04897292.1| porphobilinogen deaminase [Burkholderia pseudomallei Pasteur 52237] gi|254199404|ref|ZP_04905770.1| porphobilinogen deaminase [Burkholderia mallei FMH] gi|254205719|ref|ZP_04912071.1| porphobilinogen deaminase [Burkholderia mallei JHU] gi|254260166|ref|ZP_04951220.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 1710a] gi|254298288|ref|ZP_04965740.1| porphobilinogen deaminase [Burkholderia pseudomallei 406e] gi|254357877|ref|ZP_04974150.1| porphobilinogen deaminase [Burkholderia mallei 2002721280] gi|61213345|sp|Q62LC0|HEM3_BURMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|61213357|sp|Q63W73|HEM3_BURPS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123599913|sp|Q3JUW3|HEM3_BURP1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|158513523|sp|A3NSN6|HEM3_BURP0 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166201495|sp|A3MLK5|HEM3_BURM7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166201496|sp|A2SAH5|HEM3_BURM9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166201497|sp|A1V5U0|HEM3_BURMS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|52209071|emb|CAH35011.1| putative porphobilinogen deaminase protein [Burkholderia pseudomallei K96243] gi|52428603|gb|AAU49196.1| porphobilinogen deaminase [Burkholderia mallei ATCC 23344] gi|76578338|gb|ABA47813.1| porphobilinogen deaminase [Burkholderia pseudomallei 1710b] gi|121229503|gb|ABM52021.1| porphobilinogen deaminase [Burkholderia mallei SAVP1] gi|124294465|gb|ABN03734.1| hydroxymethylbilane synthase [Burkholderia mallei NCTC 10229] gi|126228744|gb|ABN92284.1| porphobilinogen deaminase [Burkholderia pseudomallei 1106a] gi|126241890|gb|ABO04983.1| hydroxymethylbilane synthase [Burkholderia mallei NCTC 10247] gi|147749000|gb|EDK56074.1| porphobilinogen deaminase [Burkholderia mallei FMH] gi|147753162|gb|EDK60227.1| porphobilinogen deaminase [Burkholderia mallei JHU] gi|148027004|gb|EDK85025.1| porphobilinogen deaminase [Burkholderia mallei 2002721280] gi|157808153|gb|EDO85323.1| porphobilinogen deaminase [Burkholderia pseudomallei 406e] gi|157938460|gb|EDO94130.1| porphobilinogen deaminase [Burkholderia pseudomallei Pasteur 52237] gi|160699389|gb|EDP89359.1| porphobilinogen deaminase [Burkholderia mallei ATCC 10399] gi|217397047|gb|EEC37063.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 576] gi|225933410|gb|EEH29399.1| hydroxymethylbilane synthase [Burkholderia pseudomallei Pakistan 9] gi|237505195|gb|ACQ97513.1| hydroxymethylbilane synthase [Burkholderia pseudomallei MSHR346] gi|242139781|gb|EES26183.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 1106b] gi|243060977|gb|EES43163.1| hydroxymethylbilane synthase [Burkholderia mallei PRL-20] gi|254218855|gb|EET08239.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 1710a] Length = 329 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYIRFISN 301 + +A A +G L+ G V +DG H +R DA+ +GR + + Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGA 310 Query: 302 KNVFN 306 + + + Sbjct: 311 RAIVD 315 >gi|255037032|ref|YP_003087653.1| porphobilinogen deaminase [Dyadobacter fermentans DSM 18053] gi|254949788|gb|ACT94488.1| porphobilinogen deaminase [Dyadobacter fermentans DSM 18053] Length = 307 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 105/303 (34%), Positives = 159/303 (52%), Gaps = 6/303 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LAL A+ L I+ + TKGD+I +R+L++IG KG+FT Sbjct: 3 IKIGTRGSKLALWQAYYVEELLQR----GGVETEIVIIETKGDKILDRSLSKIGSKGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EE+E +L SG+ID AVHSAKD+ + L +I A+ RE DV +SH Sbjct: 59 EELEDQLRSGDIDIAVHSAKDLQSHLDDAFEIIAFTEREQANDVLVSHDTTLSLKSGESF 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS RR A+L + I +D RG ++TRL KL + A+LLA+AG+ R++ + I Sbjct: 119 TVGTSSTRRVAVLKHYYPHIKTVDMRGNLQTRLRKLEEGQCDALLLAFAGVHRMEYDDKI 178 Query: 186 KEILNIEDFPPSPGQGAICIETHV--NNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 E L +++F P+ GQG++ IET V + K +L +++N+E T + ERAFL L G Sbjct: 179 AEHLLLDEFTPAVGQGSVAIETAVALDPAKKSKLRELLNNEHTETCLLAERAFLKRLQGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C + G A + G +++ DG + G +G A+ + Sbjct: 239 CSIPVFGMATLHEDEIRMTGGIISLDGTELIRKTETGATAFPQELGTALAEELLAAGADR 298 Query: 304 VFN 306 + Sbjct: 299 ILQ 301 >gi|126439305|ref|YP_001058121.1| porphobilinogen deaminase [Burkholderia pseudomallei 668] gi|166201498|sp|A3N700|HEM3_BURP6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|126218798|gb|ABN82304.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 668] Length = 329 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMVLPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYIRFISN 301 + +A A +G L+ G V +DG H +R DA+ +GR + + Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGA 310 Query: 302 KNVFN 306 + + + Sbjct: 311 RAIVD 315 >gi|253579011|ref|ZP_04856282.1| porphobilinogen deaminase [Ruminococcus sp. 5_1_39B_FAA] gi|251849954|gb|EES77913.1| porphobilinogen deaminase [Ruminococcus sp. 5_1_39BFAA] Length = 317 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 91/305 (29%), Positives = 150/305 (49%), Gaps = 11/305 (3%) Query: 1 MEKK---PFRIGTRCSPLALAHAFETRSSLMDVHKIP----PHNIVIIPLSTKGDRITNR 53 M +K IG+R S LA+ + +S + ++ + I+ + T GD I +R Sbjct: 12 MRRKMMTEVIIGSRESKLAVLQSEMVKSYIEQKNREENAGSEITVNILTMKTTGDIILDR 71 Query: 54 TLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH 113 TL ++GGKGLF +E+++ L+ G+ + +VHS KDMP ++ K L + A+ RED RDV + Sbjct: 72 TLDKVGGKGLFVKELDRALLDGKSNLSVHSLKDMPMEVPKELPLLAFSKREDPRDVLVLP 131 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173 + +L +G SSLRR L + ++ V RG ++TRL KL+ + ++LA Sbjct: 132 EG--VAELDPDKPLGCSSLRRTLQLKKLYPEMEVKSIRGNLQTRLRKLDEGEYSGLILAA 189 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG+KRL E I ++ PS GQG + ++ + D W + E Sbjct: 190 AGLKRLGLENRISRYFTPDEMIPSAGQGILAVQGRKGEDY--GYLDGYCDRDAWLAGTAE 247 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 RA++ LDG C S +A FA G ++ G+ + + G D +G A Sbjct: 248 RAYVKYLDGGCSSPVAAFAEVDGDEIFIRGLYYSEATGKWLTGQIRGAAEDGEKLGIALA 307 Query: 294 QYIRF 298 + ++ Sbjct: 308 KQLKS 312 >gi|317180043|dbj|BAJ57829.1| porphobilinogen deaminase [Helicobacter pylori F32] Length = 306 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 99/302 (32%), Positives = 156/302 (51%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKEC---SIESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ERAF+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKNHKHFAT-LQKLNDEESAFCCHLERAFIKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A+++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIRAVLGLPNGKEVITKEKQGDKTKALDLVQELLEAFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|169869297|ref|XP_001841215.1| porphobilinogen deaminase [Coprinopsis cinerea okayama7#130] gi|116497683|gb|EAU80578.1| porphobilinogen deaminase [Coprinopsis cinerea okayama7#130] Length = 351 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 93/323 (28%), Positives = 147/323 (45%), Gaps = 18/323 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH----NIVIIPLSTKGDRITNRTLTE 57 + + F + R S LA A + L ++ +ST GD+ ++ L Sbjct: 7 QPRTFVVAARNSQLAQVQANSVLAQLEQLYASSDDPSKPKFTTSFMSTAGDKNQSQALYL 66 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ- 116 +GGK L+T+E+E L E+D VHS KD+PT L +G + A L RED D + + Sbjct: 67 MGGKALWTKELEVALKDKEVDMLVHSLKDVPTTLPEGCLLGAILEREDPVDALVVKKGKE 126 Query: 117 ----SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAIL 170 SL+DL SV+GTSS+RR A L R + +D RG + TRL KL+ + A++ Sbjct: 127 GVWKSLEDLPEGSVVGTSSVRRVAQLKRKFPGLRFLDVRGNLNTRLAKLDAEDGPYAALI 186 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 LA AG+ RL I LN + QGA+ +E ++ ++ E+++ + H T Sbjct: 187 LAKAGLVRLGWGDRITADLNPPTLYHAVSQGALAVEIRDDDLESLEILQKLTHRGTDWKC 246 Query: 231 NCERAFLAELDGSCKSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEV---SRNGNRC 283 ERA L L+G C + + L G V + DG E + + Sbjct: 247 RAERALLRVLEGGCSVPVGVYTTLTKEGGDELLEITGCVTSLDGSEHVEESLKEKVTSVE 306 Query: 284 DAINIGRDAAQYIRFISNKNVFN 306 +A +G A+ + + + Sbjct: 307 EAEAVGVKLAKVLMEKGATRILD 329 >gi|317013683|gb|ADU81119.1| porphobilinogen deaminase [Helicobacter pylori Gambia94/24] Length = 306 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 96/303 (31%), Positives = 152/303 (50%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IG+R S LAL A + L I + T GD+I + L +IGGKGLF Sbjct: 3 KLVIGSRGSELALWQANHIKERLKKEC---SMESEIQIVKTTGDKILDAPLNKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L Sbjct: 60 TKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183 + +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL + Sbjct: 120 AKVGTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ER F+ L+G Sbjct: 180 KYRKAFSVEEMIPSMGQGALGVEMLKNHKHFIT-LQKLNDEESAFCCHLEREFIKGLNGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I A G + ++ +GK + G++ A ++ ++ + K Sbjct: 239 CQIPIGVHASLMGDEVKIRAVLGLPNGKEVITKEKQGDKTKAFDLIQELLEEFLQSGAKE 298 Query: 304 VFN 306 + Sbjct: 299 ILE 301 >gi|229586831|ref|YP_002845332.1| porphobilinogen deaminase [Rickettsia africae ESF-5] gi|259646263|sp|C3PNS9|HEM3_RICAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|228021881|gb|ACP53589.1| Porphobilinogen deaminase [Rickettsia africae ESF-5] Length = 351 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 99/250 (39%), Positives = 148/250 (59%), Gaps = 3/250 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLAL H + P N I+P+ T GD I N+ L +IGGK LF Sbjct: 5 IRIGTRKSPLALIHTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++ Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+ Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLEVFNPE 182 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ P GQG I +E ++ E+ INH T++ + ERAFL LD +C Sbjct: 183 YCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFLEYLDANC 242 Query: 245 KSAIAGFAYC 254 ++ IA ++ Sbjct: 243 RTPIAAYSQY 252 >gi|148693633|gb|EDL25580.1| mCG10727, isoform CRA_a [Mus musculus] Length = 371 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 95/334 (28%), Positives = 141/334 (42%), Gaps = 58/334 (17%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + L ++ P II +ST GD+I + L++IG K L Sbjct: 58 RVIRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKSL 115 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H K L Sbjct: 116 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTL-- 173 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKKE 182 RG + TRL KL+ + AI+LA AG++R+ + Sbjct: 174 ------------------------ETLRGNLNTRLRKLDELQEFSAIVLAVAGLQRMGWQ 209 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L+G Sbjct: 210 NRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRHLEG 269 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD------- 284 C +A K LY G V + DG + + +G D Sbjct: 270 GCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLVGIT 329 Query: 285 -----------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 330 ARNIPRGAQLAAENLGISLASLLLNKGAKNILDV 363 >gi|238650859|ref|YP_002916714.1| porphobilinogen deaminase [Rickettsia peacockii str. Rustic] gi|259646264|sp|C4K265|HEM3_RICPU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238624957|gb|ACR47663.1| porphobilinogen deaminase [Rickettsia peacockii str. Rustic] Length = 351 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 99/250 (39%), Positives = 148/250 (59%), Gaps = 3/250 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLAL H + P N I+P+ T GD I N+ L +IGGK LF Sbjct: 5 IRIGTRKSPLALIHTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++ Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+ Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLEVFNPE 182 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ P GQG I +E ++ E+ INH T++ + ERAFL LD +C Sbjct: 183 YCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFLEYLDANC 242 Query: 245 KSAIAGFAYC 254 ++ IA ++ Sbjct: 243 RTPIAAYSQY 252 >gi|149194367|ref|ZP_01871464.1| Porphobilinogen deaminase [Caminibacter mediatlanticus TB-2] gi|149135542|gb|EDM24021.1| Porphobilinogen deaminase [Caminibacter mediatlanticus TB-2] Length = 295 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 106/298 (35%), Positives = 162/298 (54%), Gaps = 10/298 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LAL A + L ++ H + + ++T GD+I ++ L IGGKGLF Sbjct: 2 KLTIATRGSKLALWQAEWVKKRLENL----GHEVDLKIVTTTGDKILDKPLASIGGKGLF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGL-QISAYLPREDIRDVFISHTAQSLKDLAL 123 +E+E+ L+ GE AVHS KD PT+ K ++A RE + DVF+S T ++L +L Sbjct: 58 IKEVEEALLRGEAQIAVHSLKDFPTEYNKEHFTLAAVPKREAVEDVFLSETFETLAELPH 117 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-- 181 ++V+GTSS+RR L +R D+ + D RG ++TR+NKL + AI+LAYAG+KRL Sbjct: 118 NAVVGTSSIRRAMQLKAFREDLVISDLRGNVDTRINKLKKGEYDAIILAYAGVKRLNLIK 177 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E EIL+ + P+ GQGA+ IET + + K E VK +N T V ER F+ EL+ Sbjct: 178 EVKYFEILDTDIMIPAMGQGALGIET-IKDEKVIEAVKPLNDLWTKIEVTIERDFIDELN 236 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C + + A ++ +L + K+ + + N GR+ A+ + Sbjct: 237 LGCHAPVGVNAKIMVDDSIKIKAAILDKNNKVIKK-EMVVPFDEWENAGREFAEEFKE 293 >gi|91218004|ref|ZP_01254956.1| porphobilinogen deaminase [Psychroflexus torquis ATCC 700755] gi|91183862|gb|EAS70253.1| porphobilinogen deaminase [Psychroflexus torquis ATCC 700755] Length = 302 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 10/304 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K IGTR S LA+ A + ++ L + ++ ++ P+ + GD ++ L E+G Sbjct: 1 MS-KTISIGTRDSELAMWQAHKVKTLLENQ----GYSTILKPVKSTGDLNLDQPLYEMGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ L+ GEID AVHS KD+PT L KG+ A LPR + D+ + H S Sbjct: 56 TGIFTKTLDVALVKGEIDIAVHSMKDVPTALPKGVVQGAVLPRANTSDILL-HKGLSF-- 112 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L I T SLRRKA LR V + RG + TRL KL N+ + + A AG++R+ Sbjct: 113 LENKGTIATGSLRRKAQWLRKYPQHKVENLRGNVNTRLQKLQNHDWNGAIFAAAGLERIN 172 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + ++ P+P QGA+ + T +N ++ ++ +NH DT +V ER FL L Sbjct: 173 LK--PDNHIELDWMIPAPAQGAMLVVTMEHNTVCRKALEKLNHTDTALAVRVEREFLKTL 230 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C + I A K + F + + DGK + + D G+ A+++ Sbjct: 231 EGGCTAPIGALATIKDREINFRAGLFSLDGKQTFTIHEVISIDDVEGFGKRCAEHVLKQG 290 Query: 301 NKNV 304 + Sbjct: 291 GGKL 294 >gi|312375045|gb|EFR22490.1| hypothetical protein AND_15185 [Anopheles darlingi] Length = 638 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 101/314 (32%), Positives = 149/314 (47%), Gaps = 34/314 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK R+G+R S LAL + L ++ P I ++T GDR+ N++L +IG K Sbjct: 9 AKKTIRVGSRKSELALTQTKHVIARLQKLN--PDVVYEIHTMTTVGDRVLNKSLPKIGEK 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118 LFT+++E L +G +D VHS KD+PT L G+ I A L RED RD + H +L Sbjct: 67 SLFTKDLEDALRTGGVDFVVHSLKDLPTALPVGMAIGAVLEREDPRDALVLNERHRGSTL 126 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176 L S+IGTSSLRR A L R+ ++V D RG + TRL KL+ +K I+LA AG+ Sbjct: 127 ASLPRGSLIGTSSLRRSAQLARYYRHLNVCDIRGNLNTRLAKLDADASKFAGIILAQAGL 186 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ + I +++ + + GQGA+ +E N+ ++ + H +T + ER+F Sbjct: 187 VRMGWNERIDQVIEPSEILYAVGQGALAVECRSNDEYILGMLAKLCHLETQCRILTERSF 246 Query: 237 LAELDGSCKSAIAGFAYCKGS---------------------------TLYFYGIVLASD 269 L L G C + +A K L G V + D Sbjct: 247 LRTLGGGCSAPVAVRTELKRQADSDSSNNNNSNVQRKRSSVDTEQGTFQLQVEGAVWSLD 306 Query: 270 GKIFHEVSRNGNRC 283 GK S Sbjct: 307 GKTEIRTSGECTLD 320 >gi|239946738|ref|ZP_04698491.1| porphobilinogen deaminase [Rickettsia endosymbiont of Ixodes scapularis] gi|239921014|gb|EER21038.1| porphobilinogen deaminase [Rickettsia endosymbiont of Ixodes scapularis] Length = 350 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 97/250 (38%), Positives = 146/250 (58%), Gaps = 3/250 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLAL + P N I+P+ T GD I N+ L +IGGK LF Sbjct: 5 IRIGTRKSPLALIQTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ +ID AVHS KD+P ++ + L I+A L R+D RDVF+ +S+++L ++ Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEELVIAAVLERKDPRDVFVCLNYKSIEELPQNA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 VIG+S++RRKA + + R D+ FRG +++R+ KL + A +LAYAG+KRL Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKATVFRGNVDSRIKKLMTGEVDATILAYAGLKRLGAFNPE 182 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ P GQG I +E ++ E+ INH T++ + ERAFL LD +C Sbjct: 183 YCHLIEYSQMLPCIGQGVIAVEIRQDDNAMLEICNQINHIPTFELIKPERAFLEYLDANC 242 Query: 245 KSAIAGFAYC 254 ++ IA ++ Sbjct: 243 RTPIAAYSKY 252 >gi|269128634|ref|YP_003302004.1| porphobilinogen deaminase [Thermomonospora curvata DSM 43183] gi|268313592|gb|ACY99966.1| porphobilinogen deaminase [Thermomonospora curvata DSM 43183] Length = 311 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 96/305 (31%), Positives = 156/305 (51%), Gaps = 12/305 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S +A + L + H + ++ ++T+GD I+ L ++GG G+F Sbjct: 4 LRLGTRKSLMATTQSRRVGDELTRLT---GHAVELVGVTTEGD-ISRAHLAQMGGTGVFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + KLISGE+D AVHS KD+PT +G+ ++A R+D RD L DL + Sbjct: 60 SALRDKLISGEVDFAVHSLKDLPTAPAEGITLAAVYRRDDPRDALCGP--LKLADLPRGA 117 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT S RR A L R D+ ++ RG +TRL K+ + + A++LAYAG+ R+ + + Sbjct: 118 RVGTGSPRRVAQLRALRGDLEIVPIRGNADTRLRKVADGELDAVVLAYAGLGRIGRRDAV 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+ + D P+PGQGA+ +E + EL+ ++H T +V ER LA L+ C Sbjct: 178 VEVFDPADMLPAPGQGALALECRSDRLDLIELLATVDHAPTRAAVTAERTVLAVLEAGCS 237 Query: 246 SAIAGFAYCKGS------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + + +A + S +L+ V DG +S +G+ A IGR+ A + Sbjct: 238 APVGAYATVEDSAEEEQPSLHLSACVAGIDGARQVRLSGSGHPERAEEIGRELAAQLLAQ 297 Query: 300 SNKNV 304 + Sbjct: 298 GADQL 302 >gi|282865792|ref|ZP_06274842.1| porphobilinogen deaminase [Streptomyces sp. ACTE] gi|282559436|gb|EFB64988.1| porphobilinogen deaminase [Streptomyces sp. ACTE] Length = 311 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 99/304 (32%), Positives = 149/304 (49%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L + P ++P+ T GD L+++ GKG FT Sbjct: 7 IRIVSRDSPMALAQVERVRNELAA--RYPALRTEVVPVRTTGDTWLGD-LSQVEGKGAFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +A+L R+DIRD + +L +L Sbjct: 64 KEVDAALLAGEADLAVHCVKDIPADRPLPAGTTFAAFLERDDIRDALVHPDGLTLDELPP 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S IGTSS+RR A L ++ + FRG RL KL + A+LLA +G++R+ + Sbjct: 124 GSRIGTSSVRRTAQLAASHPELRCVPFRGNANRRLAKLAAGEVDALLLAVSGLRRIGRPD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI +IL E P G G + ++ ++ + V +NH T+ + ER FL L G Sbjct: 184 VISDILGPETMIPPIGAGVLALQCRQDDTATIDAVAALNHPATYREITAERMFLHVLQGH 243 Query: 244 CKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG+A + L G V DGK D +G A + + Sbjct: 244 CNSPIAGYATSHRNGDLSLRGCVFTPDGKTVLNAHEWAGPLDPATLGTSVAVTLLRQGAR 303 Query: 303 NVFN 306 + + Sbjct: 304 ELID 307 >gi|315497777|ref|YP_004086581.1| porphobilinogen deaminase [Asticcacaulis excentricus CB 48] gi|315415789|gb|ADU12430.1| porphobilinogen deaminase [Asticcacaulis excentricus CB 48] Length = 314 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 113/309 (36%), Positives = 173/309 (55%), Gaps = 8/309 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSL-MDVHKIPPHNIV---IIPLSTKGDRITNRTLTEIGGK 61 +IGTR S LA + + + P + ++ ++T+GDRI +R L E GGK Sbjct: 5 LKIGTRGSRLATTQCGWVQRQIVTALGHDPALSHEVAPLVIITTQGDRIQDRRLIEAGGK 64 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 LFT+EIE L+SGE+D AVHS KDMP + + GL + A+ RED RD F+S +SL+DL Sbjct: 65 QLFTKEIEDALLSGEVDVAVHSLKDMPAEDIPGLSLCAFPVREDPRDAFVSLKYRSLEDL 124 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GT+SLRR+A L R D+ V+ RG ++TRL+KL A+LLA AG+KR+ Sbjct: 125 PQGAKLGTASLRRQAQALAVRPDLEVVMLRGNVDTRLSKLEAGHCDAMLLAAAGLKRMGL 184 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E IK ++ + FP +PGQGA+ I+ N+ QE +K ++H +T ++ ER L L+ Sbjct: 185 EAHIKSYIDPDLFPCAPGQGALAIQCRTNDLD-QEWIKRLHHVETHLQISAERGALVALE 243 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIRF 298 SC++A+ +A +G L + L +DG+ + A +G Q IR Sbjct: 244 ASCRTAVGAYAKIEGDALTLFVEALTADGRTRWQRRETIIAPTLETAHALGLGLGQSIRD 303 Query: 299 ISNKNVFNF 307 + + + Sbjct: 304 EAGDRLIQY 312 >gi|258541892|ref|YP_003187325.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-01] gi|256632970|dbj|BAH98945.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-01] gi|256636027|dbj|BAI01996.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-03] gi|256639082|dbj|BAI05044.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-07] gi|256642136|dbj|BAI08091.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-22] gi|256645191|dbj|BAI11139.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-26] gi|256648246|dbj|BAI14187.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-32] gi|256651299|dbj|BAI17233.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654290|dbj|BAI20217.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-12] Length = 357 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 111/320 (34%), Positives = 165/320 (51%), Gaps = 21/320 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-----NIVIIPLSTKGDRITNRTLTEIG 59 P R+GTR SPLAL R+ L + + P ++T GD++ NR L EIG Sbjct: 39 PLRVGTRGSPLALVQT---RAFLTTLTRFCPVLRDMGAFQEHQINTTGDQVQNRRLAEIG 95 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +EI + L G ID AVHS KD+ T L GL ++ L RED RD I + Sbjct: 96 GKGLFAKEIHEALADGRIDFAVHSLKDLETTLPPGLVLACTLKREDARDALILSPGLAQS 155 Query: 120 D-------LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLA 172 D L ++IG +S+RR+A +L R D+ RG ++TRL+KL ++ A LLA Sbjct: 156 DPDDPYSALPEGALIGCASVRRQAQMLHVRPDLKFGLLRGNVQTRLDKLAAHQCQATLLA 215 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 AG+KRL + +L+ P+ GQG + + ++ + +EL+ I + Sbjct: 216 LAGLKRLGMAERASIVLDPTVMVPAAGQGIVGVTVREDDIELRELLSAIEDYEARAVATA 275 Query: 233 ERAFLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286 ER+ LAELDGSC++ I G+A + L+ G+V DG + S G DA Sbjct: 276 ERSLLAELDGSCRTPIGGYAQLIPIVAGEDPKLHLTGLVAREDGSFLLKRSITGLPEDAA 335 Query: 287 NIGRDAAQYIRFISNKNVFN 306 +G++ + +R S ++F Sbjct: 336 RLGKELGESLRKDSPSDIFE 355 >gi|254519530|ref|ZP_05131586.1| porphobilinogen deaminase [Clostridium sp. 7_2_43FAA] gi|226913279|gb|EEH98480.1| porphobilinogen deaminase [Clostridium sp. 7_2_43FAA] Length = 290 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 105/293 (35%), Positives = 165/293 (56%), Gaps = 6/293 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LA A + + + + I ++++ T+GDR + TL +IGGKGLF Sbjct: 3 LIIATRKSKLAQVQADKVIELIKEKNNINAKKLLVV---TEGDRRLDVTLDKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ E AVHS KD+P +L + ++ A R+DIRDVF+S +DL + Sbjct: 60 KEIEYALLNKEAHAAVHSMKDVPFELSEDFELVAIPERDDIRDVFVSSNGIHFQDLKEGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +IGTSS+RR A+L + R D++++ RG ++TRL+K+ I+LA AGIKRL E +I Sbjct: 120 IIGTSSIRRAAMLKKLRGDLNIVPIRGNVQTRLDKMKKENMDGIILAAAGIKRLGLEDII 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++F P+ GQGA+ IE N +K +++++ +V ER+F+ +L+G C Sbjct: 180 TDYFDPKEFLPAIGQGALGIEALKNGEY-NNYLKKLDNKEVRIAVEAERSFMKKLNGGCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 S I ++ K LY G GKI + G + + I +G AQ I Sbjct: 239 SVIGVYSEIKNDDLYMIGT-FDVGGKIIKKD-ILGKKSENIELGFKLAQKILE 289 >gi|121608027|ref|YP_995834.1| porphobilinogen deaminase [Verminephrobacter eiseniae EF01-2] gi|121552667|gb|ABM56816.1| porphobilinogen deaminase [Verminephrobacter eiseniae EF01-2] Length = 345 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 101/302 (33%), Positives = 154/302 (50%), Gaps = 8/302 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P I TR S LAL A ++ L H++ ++ ++T+GD+I +R+L+++GGKGLF Sbjct: 8 PIVIATRASRLALWQAGHVQALLQAR----GHSVQLLGMTTRGDQILDRSLSKVGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KDMP +L G ++ L RED RD ++S +L+ L Sbjct: 64 VKELEAALAEGRADIAVHSLKDMPMELPAGFALACVLEREDPRDAWVSPQYATLEALPPG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+ALL R D+ + RG ++TRL KL+ + AI+LA AG+KRL E Sbjct: 124 AVVGTSSLRRQALLQALRPDLRMEPLRGNLDTRLRKLDAGQYQAIVLAVAGLKRLGLEAR 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ P+ GQGA+ IE + + H+ +W +V ERA + GSC Sbjct: 184 IRAPFAPAALLPAAGQGALGIEVRSERQDLCAALAALAHQPSWLAVAAERAVSRAMGGSC 243 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNR---CDAINIGRDAAQYIRFIS 300 +A + G+ L G+ + A +G A+ + Sbjct: 244 SMPLAAYGQFHGAVLQLDAAWGDPQGQAPLVRAQASATVTTLAQAEALGSALARRLCADG 303 Query: 301 NK 302 + Sbjct: 304 AR 305 >gi|325690356|gb|EGD32360.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK115] Length = 306 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 110/302 (36%), Positives = 163/302 (53%), Gaps = 9/302 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVEQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122 F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL Sbjct: 60 FVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 120 EGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 183 K---VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + L P+ QGA+ +E + + ++L+ + E T V ERA LA+ Sbjct: 180 DQSLLHIQPLETRLCLPAISQGALAVEYREEDEELRKLLATVQDEKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA A KG ++ DG+ VS G D + A + + Sbjct: 240 MNADCTFPIAALAQKKGQDYQLEAMLAKEDGQCVF-VSLQG--QDGQELAEQAVRQLADK 296 Query: 300 SN 301 Sbjct: 297 GA 298 >gi|15892629|ref|NP_360343.1| porphobilinogen deaminase [Rickettsia conorii str. Malish 7] gi|20138263|sp|Q92HR5|HEM3_RICCN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|15619798|gb|AAL03244.1| porphobilinogen deaminase [Rickettsia conorii str. Malish 7] Length = 351 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 99/250 (39%), Positives = 148/250 (59%), Gaps = 3/250 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLAL H + P N I+P+ T GD I N+ L +IGGK LF Sbjct: 5 IRIGTRKSPLALIHTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++ Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRMPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+ Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLEVFNPE 182 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ P GQG I +E ++ E+ INH T++ + ERAFL LD +C Sbjct: 183 YCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFLEYLDANC 242 Query: 245 KSAIAGFAYC 254 ++ IA ++ Sbjct: 243 RTPIAAYSQY 252 >gi|157828627|ref|YP_001494869.1| porphobilinogen deaminase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933343|ref|YP_001650132.1| porphobilinogen deaminase [Rickettsia rickettsii str. Iowa] gi|189028152|sp|B0BY00|HEM3_RICRO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189028153|sp|A8GSI6|HEM3_RICRS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157801108|gb|ABV76361.1| porphobilinogen deaminase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908430|gb|ABY72726.1| porphobilinogen deaminase [Rickettsia rickettsii str. Iowa] Length = 351 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 99/250 (39%), Positives = 148/250 (59%), Gaps = 3/250 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLAL H + P N I+P+ T GD I N+ L +IGGK LF Sbjct: 5 IRIGTRKSPLALIHTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++ Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+ Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLEVFNPE 182 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ P GQG I +E ++ E+ INH T++ + ERAFL LD +C Sbjct: 183 YCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFLEYLDANC 242 Query: 245 KSAIAGFAYC 254 ++ IA ++ Sbjct: 243 RTPIAAYSQY 252 >gi|313215076|emb|CBY42810.1| unnamed protein product [Oikopleura dioica] Length = 368 Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 101/343 (29%), Positives = 159/343 (46%), Gaps = 47/343 (13%) Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 G+R S LA+ +S L + P I I + TKGD++ + L++IG K LFT+E+ Sbjct: 6 GSRKSELAMLQTNFVKSLLKKAN--PKLEIEIEGIVTKGDKVLDVALSKIGEKSLFTKEL 63 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA------QSLKDLA 122 E L G++ VHS KDMPT L +G+ +S L RE D + +SL L Sbjct: 64 EVALQEGKVQFLVHSLKDMPTTLPEGMVLSTILERESPEDAVVIRKDLADKGIKSLDQLE 123 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL------NNNKAHAILLAYAGI 176 ++IG+SSLRRKA L R + + RG + TRL KL + A++LA AG+ Sbjct: 124 KTALIGSSSLRRKAQLKRKYPEFRIESVRGNLNTRLKKLDNVEKSYETEYSALILARAGL 183 Query: 177 KRLKKEK-----VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 +R+ ++ + E L+ + + GQGA+ IET + K EL+ ++HE+T V Sbjct: 184 ERMARQNETFVGRLSETLDTKTCLYAVGQGALAIETMATDEKTIELLSSLSHEETTLRVV 243 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLY-FYGIVLASDGKIFHEVS------------- 277 ER+F+ L+G C + +A + K + G V + DGK + Sbjct: 244 AERSFMKALNGGCSAPVAVESKIKDDNILALTGGVFSLDGKESIIKTENIDLCPAKMPKI 303 Query: 278 ---------RNGNRCD-----AINIGRDAAQYIRFISNKNVFN 306 G A+ +GR+ A+ + + Sbjct: 304 KYPFDYVGIVRGKIDKSKMYLAMKLGRELAEQLIADGAMKILE 346 >gi|313676857|ref|YP_004054853.1| hydroxymethylbilane synthase [Marivirga tractuosa DSM 4126] gi|312943555|gb|ADR22745.1| hydroxymethylbilane synthase [Marivirga tractuosa DSM 4126] Length = 311 Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 159/303 (52%), Gaps = 7/303 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A ++ + H I + TKGD+I + +++IG KG+FT Sbjct: 3 IRIGTRGSKLALWQAEYVKTRIEKA----GHTAEIKIIQTKGDKILDVAISKIGSKGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKDLALH 124 EEIE +L G ID AVHSAKDM ++L +G + A+ RE + DV +SH + D Sbjct: 59 EEIEAQLEDGNIDIAVHSAKDMQSELPQGFDLIAFTEREKVNDVLVSHKDSIDINDKDNP 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 VIGTSS RR A L + I +D RG ++TR+ K+ AILLAYAG+ R++ + Sbjct: 119 IVIGTSSTRRIATLKHFYPHIKTVDIRGNLQTRIRKMEEGLCDAILLAYAGVHRMEYDDK 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHV--NNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 IK L+ ++F P+ GQG++ IE H + K Q L +NH +T + ERA+L L G Sbjct: 179 IKLELSTQEFIPAVGQGSVAIEVHESIEDDKKQMLRFALNHRNTEYCLRAERAYLRHLQG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C + G A +++ +++ DG+ + A +G A+ I Sbjct: 239 GCSIPVFGLATLNSNSIEMEAGIISLDGQERISMKLTDETSRAEELGTLIARQILKKGGD 298 Query: 303 NVF 305 V Sbjct: 299 KVL 301 >gi|227508197|ref|ZP_03938246.1| porphobilinogen deaminase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227192426|gb|EEI72493.1| porphobilinogen deaminase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 303 Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 103/301 (34%), Positives = 148/301 (49%), Gaps = 6/301 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K F +GTR S LA+ +L + + P + ++T+GDR +L +IGGKG Sbjct: 2 KPEFVVGTRQSKLAMRQTNLVVDALKE--RFPKIIFKVEKITTQGDRNRKDSLRKIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDL 121 +F +EIE++L ID AVHS KD+ L K L I R+ D IS + L Sbjct: 60 IFVKEIEQRLTDKRIDFAVHSLKDVMPSLPKNLIIGGVPKRDSPFDCLISTKPFSDIDQL 119 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSS RR+ R D+ ++ RG +++R+ KL + I+LA AG+ RL Sbjct: 120 PKGARIGTSSSRRQGQFSHLRPDVEIVSIRGNVDSRIQKLQRDHLDGIILAEAGLNRLGV 179 Query: 182 EKVIKEILNIE-DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + L+++ D P+ GQGAI IE ++ L+K I DT SV ER FL L Sbjct: 180 DLTGLYRLSLKNDLLPAAGQGAIGIECRADDHDTLALLKQIEDADTRQSVTIERDFLRRL 239 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC I FA + F G+V + DGKIF S+ N+G + A + Sbjct: 240 GGSCNFPIGAFASQTSMGVRFDGLVASIDGKIFFSKSKT--EQTGGNLGEEVADELISEG 297 Query: 301 N 301 Sbjct: 298 A 298 >gi|254196423|ref|ZP_04902847.1| porphobilinogen deaminase [Burkholderia pseudomallei S13] gi|169653166|gb|EDS85859.1| porphobilinogen deaminase [Burkholderia pseudomallei S13] Length = 329 Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYIRFISN 301 + +A A +G L+ G V +DG H +R DA+ +GR + + Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGA 310 Query: 302 KNVFN 306 + V + Sbjct: 311 RAVVD 315 >gi|254778943|ref|YP_003057048.1| porphobilinogen deaminase [Helicobacter pylori B38] gi|254000854|emb|CAX28786.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Helicobacter pylori B38] Length = 306 Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 101/307 (32%), Positives = 156/307 (50%), Gaps = 7/307 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK IG+R S LAL A + L I + TKGD+I + L +IGG Sbjct: 1 MEK--LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L Sbjct: 56 KGLFTKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMS 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL Sbjct: 116 LPKGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLN 175 Query: 181 KE-KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ER F+ Sbjct: 176 IQGAKYRKAFSVEEMIPSMGQGALGVEMLKNHKHFIT-LQKLNDEESAFCCHLEREFIKG 234 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I A G + ++ +GK + G++ A ++ ++ + Sbjct: 235 LNGGCQIPIGVHASLMGDGVKIQAVLGLPNGKEVITKEKRGDKTKAFDLIQELLEEFLQS 294 Query: 300 SNKNVFN 306 K + Sbjct: 295 GAKEILE 301 >gi|307611613|emb|CBX01297.1| porphobilinogen deaminase HemC [Legionella pneumophila 130b] Length = 284 Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 91/277 (32%), Positives = 144/277 (51%), Gaps = 1/277 (0%) Query: 30 VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPT 89 V + P +I ++P+ T GDR L GGKGLF +E+E+ L+ D AVHS KDMP Sbjct: 3 VKQWPNLSIELLPMITSGDRFLKDKLLSAGGKGLFVKELEEALLDKRADLAVHSTKDMPA 62 Query: 90 KLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVID 149 +L GL ++A R++ D IS +SL L +++IGTSSLRR++ LL + ++ + Sbjct: 63 QLPDGLSLAAICKRDNPFDALISPQFKSLDALPKNAIIGTSSLRRQSQLLAYNPNLQIKT 122 Query: 150 FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209 RG I TRL+KL + + AI+LA AG++R+ I +++ + P+ QGA+CIE Sbjct: 123 LRGNIHTRLSKLESGEYQAIILAAAGLERMGLTHHITQLIPDDIMLPTCAQGALCIECRT 182 Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST-LYFYGIVLAS 268 ++ + QEL+ +N + V+ ER A+L G+C A + L VL Sbjct: 183 DDLEIQELIHSLNDPISALCVHTERRVNAKLGGNCHIPFAVYCTITAENLLLLRAKVLNL 242 Query: 269 DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 DG + + G +A I + + + Sbjct: 243 DGSQMIDDEQQGKIEEAEIIADRCTESLMTKGAMTLL 279 >gi|34581586|ref|ZP_00143066.1| porphobilinogen deaminase [Rickettsia sibirica 246] gi|28262971|gb|EAA26475.1| porphobilinogen deaminase [Rickettsia sibirica 246] Length = 351 Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 99/250 (39%), Positives = 148/250 (59%), Gaps = 3/250 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLAL H + P N I+P+ T GD I N+ L +IGGK LF Sbjct: 5 IRIGTRKSPLALIHTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGGKALFL 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++ Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+ Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLEVFNPE 182 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ P GQG I +E ++ E+ INH T++ + ERAFL LD +C Sbjct: 183 YCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFLEYLDANC 242 Query: 245 KSAIAGFAYC 254 ++ IA ++ Sbjct: 243 RTPIAAYSQY 252 >gi|330993440|ref|ZP_08317375.1| Porphobilinogen deaminase [Gluconacetobacter sp. SXCC-1] gi|329759470|gb|EGG75979.1| Porphobilinogen deaminase [Gluconacetobacter sp. SXCC-1] Length = 360 Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 115/316 (36%), Positives = 164/316 (51%), Gaps = 15/316 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGGKG 62 P ++GTR SPLAL + L + +ST GD++ NR L EIGGKG Sbjct: 41 PLKVGTRASPLALVQTRAFLTVLTRFCPVLRDMGAFQEHQISTTGDQVQNRKLAEIGGKG 100 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD-- 120 LF +EI + L+ G ID AVHS KD+ T L GL ++ L RED RDV I D Sbjct: 101 LFAKEIHEALLDGRIDFAVHSLKDLETTLPPGLVLACTLKREDARDVLILGPGCGEPDPA 160 Query: 121 -----LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 L +++G +S+RR+A +L R D+ RG ++TRL+KL + A LLAYAG Sbjct: 161 DPYSVLPQGALVGCASVRRQAQMLHVRPDLKFGLLRGNVQTRLDKLAARQCDATLLAYAG 220 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 ++RL E IL+ P+ GQG + + ++ + +EL+ I + ERA Sbjct: 221 LRRLGMEDRADVILDPTIMVPAAGQGIVGVTVRESDVELRELLSAIEDYEARAVATAERA 280 Query: 236 FLAELDGSCKSAIAGFAY----CKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 LAELDGSC++ I G+A G L+ G+V DG + S +G DA +G Sbjct: 281 LLAELDGSCRTPIGGYARLIPVVAGGAPELHLTGLVAREDGSFLLKRSISGAPADAARLG 340 Query: 290 RDAAQYIRFISNKNVF 305 RD + +R S ++F Sbjct: 341 RDLGRSLRADSPADIF 356 >gi|320006816|gb|ADW01666.1| porphobilinogen deaminase [Streptomyces flavogriseus ATCC 33331] Length = 311 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 101/304 (33%), Positives = 149/304 (49%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT Sbjct: 7 IRIVSRDSPMALAQVERVRAGLAALH--PDTVTEVVPVRTTGDKWLGD-LSKVEGKGAFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +A+L R+DIRD + +L+ L Sbjct: 64 KEVDAALLAGEADLAVHCVKDIPADRPLPAGTTFAAFLERDDIRDALVHPDGLTLEQLPE 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSS+RR A L + + FRG RL KL +A A+LLA AG+ R+ + Sbjct: 124 GTRIGTSSVRRTAQLASSHPHLDCVPFRGNANRRLAKLAAGEADALLLAVAGLHRIGRPD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI +IL E P G G + ++ ++ E V +NH T+ + ER FL L G Sbjct: 184 VISDILAPETMCPPIGAGVLALQCREDDTATIEAVGALNHPGTYREITAERMFLHVLQGH 243 Query: 244 CKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG+A + L V DGK D +G A + + Sbjct: 244 CNSPIAGYATAHRNGDLSLRACVFTPDGKTVLNAHEWAGPLDPATLGTSVAVSLLRQGAR 303 Query: 303 NVFN 306 + + Sbjct: 304 ELID 307 >gi|110636914|ref|YP_677121.1| hydroxymethylbilane synthase [Cytophaga hutchinsonii ATCC 33406] gi|123163848|sp|Q11XT5|HEM3_CYTH3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|110279595|gb|ABG57781.1| hydroxymethylbilane synthase [Cytophaga hutchinsonii ATCC 33406] Length = 312 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 162/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RIGTR S LAL A + L P I+ + T GD+I +++L++IG KG Sbjct: 2 NKTVRIGTRGSKLALWQAEHVAACLQTKGLEP----QIVIIDTTGDKILDQSLSKIGSKG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFTEE+E++L +G ID AVHSAKD+ T L G+ I A RE + DV +SH Sbjct: 58 LFTEELEEQLHAGTIDIAVHSAKDLQTHLKGGMYILAITERELVNDVLVSHKPIDTLKNN 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +IGTSS RR+ALL ++ ++D RG ++TR+ K+ A+LLAYAG+ R+ + Sbjct: 118 PDLIIGTSSTRRRALLRKFYPQAKMVDMRGNLQTRIRKMEEGACDAMLLAYAGMHRMGYD 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHV--NNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +IKE L++E+F P+ GQG + IE + KA + V+N T +V+ ERAFL L Sbjct: 178 SLIKEKLSLEEFIPAAGQGTLAIEAASTLDKEKAAVIRAVLNDAATETAVSAERAFLRTL 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C + A + + G +++ DG + DA G + A + Sbjct: 238 EGGCSIPVFALAVERDTDYLLTGGIVSLDGTKYLRKEIRFTAADAEQRGVELATVLLKDG 297 Query: 301 NKNVF 305 + Sbjct: 298 ADEIL 302 >gi|57239097|ref|YP_180233.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden] gi|58579044|ref|YP_197256.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden] gi|57161176|emb|CAH58090.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden] gi|58417670|emb|CAI26874.1| Porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden] Length = 299 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 113/300 (37%), Positives = 168/300 (56%), Gaps = 5/300 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +GTR S LA+A A E + L + P N+ I+ + T GD +L+EIGG Sbjct: 1 MNSMNVYVGTRGSILAIAQAMEVKKLL--YNYFPDINVQIVHIVTSGDINDKISLSEIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L++G ID AVHS KD+P L I L R DVFIS QSL+ Sbjct: 59 KGLFLKELEEALLTGTIDLAVHSMKDVPAFYCDSLVIPCILKRSSPYDVFISSKYQSLRS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++VIGTSS+RRK L+R S + V+ RG ++TR+ KL + I+LA AG+ R+ Sbjct: 119 LPDNAVIGTSSIRRKVQLMRLLSSVQVVPIRGNVDTRILKLEAGQYDGIILAKAGLMRIN 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K VIKE+L+ + + GQGAI I+ N+ K +++K++N + ++ SV ER+F+ + Sbjct: 179 KTHVIKEVLDPQVMLSAVGQGAIGIQCRANDYKMIDMIKILNCKKSYISVAAERSFMKTV 238 Query: 241 DGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +GSC + +A A Y TLY ++ + +F N CDA G + + Sbjct: 239 NGSCDTPLAALAKYVNSDTLYMSCMLSNEEKTVF--SDCYFNECDAEISGINMGNDLMDQ 296 >gi|153953354|ref|YP_001394119.1| porphobilinogen deaminase [Clostridium kluyveri DSM 555] gi|146346235|gb|EDK32771.1| HemC [Clostridium kluyveri DSM 555] Length = 305 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 111/291 (38%), Positives = 153/291 (52%), Gaps = 6/291 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 FRI TR S LAL L K + + T+GDR + +L +IGGKG+F Sbjct: 18 FRIATRKSKLALVQTDYVIDLLALKFK---MQCEKVLIRTEGDRKLDVSLDKIGGKGVFV 74 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IEK LI AVHS KDMP +LL +I A RED+RDVFIS DL + Sbjct: 75 KDIEKALIEKRAQAAVHSMKDMPNELLDLFEIIAMPVREDVRDVFISPEGIKFLDLPKGA 134 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS+RR + R DI ++ RG IETR+ K+ K I+LA AG+KRL ++I Sbjct: 135 VIGTSSIRRAVQIKNLRHDIEIVPIRGNIETRVRKMKEEKLDGIVLAAAGVKRLGMSEII 194 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E N +F P+ GQGAI +E N+ A + I++ED V ER+FL +L G C Sbjct: 195 TEYFNPFEFIPAVGQGAIGVEILKNSEYAST-LGKIDNEDIRMGVEAERSFLKKLQGDCH 253 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + ++ +G L GI G + G++ D I +G + I Sbjct: 254 TPVGAYSVIEGEILNITGIFQV--GNKLIKKDVCGDKWDYIALGESLGEKI 302 >gi|313227065|emb|CBY22212.1| unnamed protein product [Oikopleura dioica] Length = 382 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 101/343 (29%), Positives = 160/343 (46%), Gaps = 47/343 (13%) Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 G+R S LA+ +S L + P I I + TKGD++ + L++IG K LFT+E+ Sbjct: 6 GSRKSELAMLQTNFVKSLLKKAN--PKLEIEIEGIVTKGDKVLDVALSKIGEKSLFTKEL 63 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA------QSLKDLA 122 E L G++ VHS KDMPT L +G+ +S L RE D + +SL L Sbjct: 64 EIALQEGKVQFLVHSLKDMPTTLPEGMVLSTILERESPEDAVVIRKDLADKGIKSLDQLE 123 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL------NNNKAHAILLAYAGI 176 ++IG+SSLRRKA L R + + RG + TRL KL + A++LA AG+ Sbjct: 124 KTALIGSSSLRRKAQLKRKYPEFRIESVRGNLNTRLKKLDNVEKSYETEYSALILARAGL 183 Query: 177 KRLKKEK-----VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 +R+ ++ + E L+ + + GQGA+ IET + K EL+ ++HE+T V Sbjct: 184 ERMARQNETFVGRLSETLDTKTCLYAVGQGALAIETMATDEKTIELLSSLSHEETTLRVV 243 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLY-FYGIVLASDGKIFHEVS------------- 277 ER+F+ L+G C + +A + K + G V + DGK + Sbjct: 244 AERSFMKALNGGCSAPVAVESKIKDDNILALTGGVFSLDGKESIIKTENIDLCPAKMPKI 303 Query: 278 ---------RNGNRCD-----AINIGRDAAQYIRFISNKNVFN 306 G A+ +GR+ A+++ + Sbjct: 304 KYPFDYVGIVRGKIDKSKMYLAMKLGRELAEHLIADGAMKILE 346 >gi|119714759|ref|YP_921724.1| porphobilinogen deaminase [Nocardioides sp. JS614] gi|119535420|gb|ABL80037.1| hydroxymethylbilane synthase [Nocardioides sp. JS614] Length = 314 Score = 305 bits (781), Expect = 7e-81, Method: Composition-based stats. Identities = 91/303 (30%), Positives = 152/303 (50%), Gaps = 9/303 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGGKG 62 P R+GTR S LA + L + + ++ +ST+GDR L G Sbjct: 4 PLRVGTRASVLATTQSGLVADQLREAL---GREVELVTVSTEGDRTQAAGIPLQGGSATG 60 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F + L+ GE+D AVHS KD+PT +G+ ++A RED RDV ++ +L +L Sbjct: 61 VFVAALRDALLRGEVDVAVHSLKDLPTYPTEGITLAAVPVREDPRDVVVARDGLTLGELP 120 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + S +GT S RR A L + V+ RG ++TR+ K+ + + A++LA AG+ R+ + Sbjct: 121 VGSRVGTGSPRRVAQLHALGLGLEVVGIRGNVDTRIGKVRSGECDAVILARAGLARIGRL 180 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + E+L+ P+PGQGA+ +E ++P A ++ ++ +V ERA LA L+G Sbjct: 181 EAVTEVLDPLQMLPAPGQGALAVECRTDDPLAAQVAAALDDPRVRAAVTAERAVLATLEG 240 Query: 243 SCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C + I A G L+ + L+ DG + S +G+ DA +G + + Sbjct: 241 GCSAPIGALAEIVEGEDGDELWVRSVALSPDGALSVRRSASGSPSDAAGVGTRLGEQMLA 300 Query: 299 ISN 301 Sbjct: 301 DGA 303 >gi|312137417|ref|YP_004004754.1| hydroxymethylbilane synthase [Methanothermus fervidus DSM 2088] gi|311225136|gb|ADP77992.1| hydroxymethylbilane synthase [Methanothermus fervidus DSM 2088] Length = 289 Score = 305 bits (781), Expect = 7e-81, Method: Composition-based stats. Identities = 103/291 (35%), Positives = 161/291 (55%), Gaps = 6/291 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR SPLAL + + L + + I + T GD+I + L +IG +G+FT Sbjct: 1 MIVGTRGSPLALKQTYYVVNQLSKLV---NEEVKIKIIKTTGDKIKDSQLHKIGQRGVFT 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EI+K +++ E+D AVHS KD+PT+L + L+I A R+ +V +S S +L+ Sbjct: 58 KEIDKAVLNEEVDLAVHSLKDVPTELHEDLEIVAIPHRDSPNEVLVSK--YSWDELSEEC 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRRKA + RG IETR+ K+ + + A ++A A +KRL EK I Sbjct: 116 ILGTSSLRRKAFCRYHGKKFKIKPLRGNIETRIKKVEDGEYDATIMAEAALKRLNLEKYI 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 K+ +++ F PS GQGAI IET ++ ++K +N + V ER L EL C+ Sbjct: 176 KKRFSVKYFTPSAGQGAIAIETRSDSKYI-SVLKKLNDHRAFYEVTAERTVLKELGVGCQ 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I A KG L Y I+L+ GK+ ++ +G +A +G+ AA+ + Sbjct: 235 WPIGVVARSKGKNLNLYAILLSKKGKLLSKIELDGKLHEATKLGKKAAKKM 285 >gi|307293495|ref|ZP_07573339.1| porphobilinogen deaminase [Sphingobium chlorophenolicum L-1] gi|306879646|gb|EFN10863.1| porphobilinogen deaminase [Sphingobium chlorophenolicum L-1] Length = 308 Score = 305 bits (781), Expect = 7e-81, Method: Composition-based stats. Identities = 123/297 (41%), Positives = 165/297 (55%), Gaps = 8/297 (2%) Query: 1 MEK--KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M+K +P R+GTR SPLALA A T ++L H + I+ + T GDRI +R L EI Sbjct: 1 MQKPFRPLRLGTRGSPLALAQAHMTIAALRARHGWDEGAVEIVVVQTSGDRIQDRALAEI 60 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGK L+T+E+++ L+ GEID AVHS KD+ T ++I+A LPR D+RD + A S Sbjct: 61 GGKALWTKELDRALLEGEIDFAVHSMKDVETIRPAEIRIAAMLPRADVRDRLVG--AASF 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L V+GTSS RR A + R R D V+ FRG + TRL KL +AHA LLA AG+ R Sbjct: 119 DALPEKPVVGTSSPRRAAQVKRLRPDAGVVLFRGNVATRLAKLEKGEAHATLLAAAGLDR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + V + E P+P QGA+ IET N +L+ IN DT+D V ERA L Sbjct: 179 LGQSDVGVA-IPAEVMLPAPSQGAVGIETLSGNGAMLDLLATINDADTFDCVMAERAVLV 237 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDA 292 L G+C S IA + +Y +++ DG+ S R D A +GR Sbjct: 238 GLGGTCHSPIAALGRLEEGRIYLRAEIISPDGQETIGDSLRIERNDVATAEAMGRGL 294 >gi|315047640|ref|XP_003173195.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893] gi|311343581|gb|EFR02784.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893] Length = 342 Score = 305 bits (781), Expect = 7e-81, Method: Composition-based stats. Identities = 96/325 (29%), Positives = 146/325 (44%), Gaps = 25/325 (7%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA+ A + L + P H I L T GD+ N L G K L+ Sbjct: 10 PLRIGTRRSNLAIVQAKGVQDQLQKI--APDHTFEIEALHTLGDKDQNSALYNFGAKNLW 67 Query: 65 TEEIEKKLISGEIDCAVHSAK-------DMPTKLLKGLQISAYLPREDIRDVFISH---T 114 T E+E+ L SG++D VH K DMPT L ++A R+D RD I Sbjct: 68 TTELEELLTSGKLDVIVHCLKGECSKNSDMPTNLPDSCDLAAIPLRDDPRDALIVKAGLP 127 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLA 172 SL+ L ++IGTSS+RR A L R + + RG +ETRL KL++ ++ I+++ Sbjct: 128 YTSLQTLPEGAIIGTSSVRRSAQLHRLFPSLRFTNIRGNVETRLAKLDDPQSEYTCIVMS 187 Query: 173 YAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 G++R+ I + L +D + GQGA+ +E + K L+ + + + Sbjct: 188 ACGLERIGLGYRISQRLGSKDGGILHAIGQGALGLEVRKGDTKILHLLDQLVDHKSSLAC 247 Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGST------LYFYGIVLASDGKIFHEVSRNG---N 281 ERA + L+G C I L IV++ DG E S N Sbjct: 248 LAERALMRTLEGGCSVPIGVETEWLDEGEAADPILEMRAIVVSLDGSQCVEDSINAAVHT 307 Query: 282 RCDAINIGRDAAQYIRFISNKNVFN 306 + +A +G++ A + + Sbjct: 308 KDEATVLGQELAARMLKAGAATILE 332 >gi|254181386|ref|ZP_04887983.1| porphobilinogen deaminase [Burkholderia pseudomallei 1655] gi|184211924|gb|EDU08967.1| porphobilinogen deaminase [Burkholderia pseudomallei 1655] Length = 329 Score = 305 bits (781), Expect = 7e-81, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAALMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYIRFISN 301 + +A A +G L+ G V +DG H +R DA+ +GR + + Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGA 310 Query: 302 KNVFN 306 + + + Sbjct: 311 RAIVD 315 >gi|219853983|ref|YP_002471105.1| hypothetical protein CKR_0640 [Clostridium kluyveri NBRC 12016] gi|254800246|sp|B9DZL6|HEM3_CLOK1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|219567707|dbj|BAH05691.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 290 Score = 305 bits (781), Expect = 7e-81, Method: Composition-based stats. Identities = 111/291 (38%), Positives = 153/291 (52%), Gaps = 6/291 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 FRI TR S LAL L K + + T+GDR + +L +IGGKG+F Sbjct: 3 FRIATRKSKLALVQTDYVIDLLALKFK---MQCEKVLIRTEGDRKLDVSLDKIGGKGVFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IEK LI AVHS KDMP +LL +I A RED+RDVFIS DL + Sbjct: 60 KDIEKALIEKRAQAAVHSMKDMPNELLDLFEIIAMPVREDVRDVFISPEGIKFLDLPKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS+RR + R DI ++ RG IETR+ K+ K I+LA AG+KRL ++I Sbjct: 120 VIGTSSIRRAVQIKNLRHDIEIVPIRGNIETRVRKMKEEKLDGIVLAAAGVKRLGMSEII 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E N +F P+ GQGAI +E N+ A + I++ED V ER+FL +L G C Sbjct: 180 TEYFNPFEFIPAVGQGAIGVEILKNSEYAST-LGKIDNEDIRMGVEAERSFLKKLQGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + ++ +G L GI G + G++ D I +G + I Sbjct: 239 TPVGAYSVIEGEILNITGIFQV--GNKLIKKDVCGDKWDYIALGESLGEKI 287 >gi|16124327|ref|NP_418891.1| porphobilinogen deaminase [Caulobacter crescentus CB15] gi|221233009|ref|YP_002515445.1| porphobilinogen deaminase [Caulobacter crescentus NA1000] gi|24211766|sp|Q9ABZ8|HEM3_CAUCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800240|sp|B8GXG1|HEM3_CAUCN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|13421169|gb|AAK22059.1| porphobilinogen deaminase [Caulobacter crescentus CB15] gi|220962181|gb|ACL93537.1| porphobilinogen deaminase [Caulobacter crescentus NA1000] Length = 322 Score = 305 bits (781), Expect = 7e-81, Method: Composition-based stats. Identities = 121/320 (37%), Positives = 173/320 (54%), Gaps = 16/320 (5%) Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIP----PHNIV----IIPLSTKGDRIT 51 M ++P RIG R S L+LA + ++ + +P I +IP+ T GDRI Sbjct: 1 MSRQPPIRIGARGSKLSLAQSGLMQARIAHALGVPAGASKDEIEAAAPLIPIVTSGDRIQ 60 Query: 52 NRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI 111 +R L EIGGKGLFT+EIE+ L+ G IDCAVHS KDMP +L GL ++A RED RD FI Sbjct: 61 DRRLMEIGGKGLFTKEIEEALLDGRIDCAVHSLKDMPAELPPGLVLAATPEREDPRDAFI 120 Query: 112 SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILL 171 SH + L+DL + +GT+SLRR+A L R D+ ++ RG ++TRL KL +A AILL Sbjct: 121 SHVCERLEDLPKGARLGTASLRRQAQALHVRPDLEIVMLRGNVDTRLAKLERGEADAILL 180 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A +G+ RL + + L+ + PP+PGQGA+ IET + A ++ + T +V Sbjct: 181 AQSGLNRLGLGHLTRSWLDPDACPPAPGQGALVIETRAEDIGA-PWLEAVRCRQTTIAVA 239 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE----VSRNG--NRCDA 285 ER L L+GSC++AI A G+ L L DG ++ G + +A Sbjct: 240 AERGALLALEGSCRTAIGARAILDGARLSMIVEALTPDGAQRFRREGDITLTGADDIAEA 299 Query: 286 INIGRDAAQYIRFISNKNVF 305 G +R + Sbjct: 300 RAFGLTLGAEVRAAGGDAII 319 >gi|326201521|ref|ZP_08191392.1| porphobilinogen deaminase [Clostridium papyrosolvens DSM 2782] gi|325988121|gb|EGD48946.1| porphobilinogen deaminase [Clostridium papyrosolvens DSM 2782] Length = 297 Score = 304 bits (780), Expect = 8e-81, Method: Composition-based stats. Identities = 88/293 (30%), Positives = 155/293 (52%), Gaps = 7/293 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIG+R S LA+ + +++ + P + +I + T GD+I ++TL +IGGKGL Sbjct: 6 KKIRIGSRDSKLAIIQSEMVMAAIREF--DPDIELELITMKTTGDKILDKTLDKIGGKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E++ L + E+D VHS KDMP + L + A RED RD F+ ++ ++ Sbjct: 64 FVKELDYALYNNEVDITVHSYKDMPLEDNPELPVVAVSKREDPRDAFVLPQGENTEN--- 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IG+SS RR+ L + RG ++TRL KL++ + AI+LA AGIKRL E Sbjct: 121 NEPIGSSSQRRQLQLKALFPNHKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLES 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I ++++ P+ QG I ++ + + +K+ + E++ + ER F+ E++G Sbjct: 181 RISRYFSVDEILPAASQGIIAVQGRAG--ENFDFLKLFHSEESLCISHAERTFVREMNGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C + IA +A S + G+ + +G+R + + +G + + + Sbjct: 239 CSTPIAAYATIVESEIILKGLYHNEATGESKKECVSGSRQNPVELGYELVKKM 291 >gi|309775730|ref|ZP_07670726.1| hydroxymethylbilane synthase [Erysipelotrichaceae bacterium 3_1_53] gi|308916493|gb|EFP62237.1| hydroxymethylbilane synthase [Erysipelotrichaceae bacterium 3_1_53] Length = 299 Score = 304 bits (780), Expect = 8e-81, Method: Composition-based stats. Identities = 112/299 (37%), Positives = 157/299 (52%), Gaps = 3/299 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LALA E R L + + P H + +STKGDR + L ++ KG+F Sbjct: 3 IRMGTRGSALALAQCKEVRDRLQEAY--PQHTFELCVISTKGDRNQHVALDQMKDKGIFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE++L+ G ID AVHS KDMP+ L L + L RED RDV + TA +L+ L H+ Sbjct: 61 KEIEQQLLEGTIDLAVHSMKDMPSTLDARLCFTKTLLREDARDVLVLRTAPTLEQLPPHA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 I T S RR LLR R+D+ ++ RG IETRL KL + I+LA AG+KRLK + I Sbjct: 121 RIATGSKRRSYQLLRQRNDLEIVGIRGNIETRLRKLEEQQLDGIVLAAAGLKRLKLKPYI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L P+ QGA+ IE +LV + + V ERAFL EL+G C Sbjct: 181 TQTLKECIMVPAVAQGALAIEVCKEREDLIQLVNALCDPALDEEVCAERAFLQELNGGCH 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI-SNKN 303 + + +T+ Y + DG ++ +G R A+ + AA +R K Sbjct: 241 TPLGARCILHDTTVELYAVYGNEDGTRLKQLHVSGAREQAVELAIQAAAVLREQVGGKQ 299 >gi|302549045|ref|ZP_07301387.1| porphobilinogen deaminase [Streptomyces viridochromogenes DSM 40736] gi|302466663|gb|EFL29756.1| porphobilinogen deaminase [Streptomyces viridochromogenes DSM 40736] Length = 311 Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats. Identities = 103/304 (33%), Positives = 150/304 (49%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L H P ++P+ T GD+ L+++ GKG FT Sbjct: 7 IRIVSRDSPMALAQVERVRTELAAAH--PGVRTEVVPVKTTGDKWMGD-LSQVEGKGAFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +A+L R+DIRD I +L +L Sbjct: 64 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTVFAAFLERDDIRDALIHPDGLTLDELPA 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSS+RR A L + + FRG RL KL +A A+LLA AG++R+ ++ Sbjct: 124 GTRIGTSSVRRVAQLAATHPHLECVPFRGNANRRLAKLAAKEADALLLAVAGLERIGRQD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI EIL+ E P G G + ++ ++ + V + DT+ ER FL L G Sbjct: 184 VISEILSTETMMPPIGAGVLALQCREDDADLIDAVSGLGDPDTYRETMAERMFLHVLQGH 243 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAGFA+ L V DGK R D +G A + + Sbjct: 244 CNSPIAGFAHVDRSGELSLRACVFTPDGKTRLNAHEWAGRLDPATLGTSVAVALLRQGAR 303 Query: 303 NVFN 306 + + Sbjct: 304 EIID 307 >gi|217033471|ref|ZP_03438901.1| hypothetical protein HP9810_1g85 [Helicobacter pylori 98-10] gi|216944176|gb|EEC23604.1| hypothetical protein HP9810_1g85 [Helicobacter pylori 98-10] Length = 306 Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats. Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECF---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ER F+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKNHKHFTT-LQKLNDEESAFCCHLEREFIKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A+++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIRAVLGLPNGKEVITKEKQGDKTKALDLVQELLEAFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|167918037|ref|ZP_02505128.1| porphobilinogen deaminase [Burkholderia pseudomallei BCC215] Length = 276 Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats. Identities = 101/266 (37%), Positives = 153/266 (57%), Gaps = 2/266 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG 270 + +A A +G L+ G V +DG Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDG 276 >gi|317123819|ref|YP_004097931.1| hydroxymethylbilane synthase [Intrasporangium calvum DSM 43043] gi|315587907|gb|ADU47204.1| hydroxymethylbilane synthase [Intrasporangium calvum DSM 43043] Length = 316 Score = 304 bits (780), Expect = 1e-80, Method: Composition-based stats. Identities = 100/303 (33%), Positives = 152/303 (50%), Gaps = 9/303 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L H++ ++ ++T+GD ++ LT IGG G+F Sbjct: 4 LRLGTRRSALATTQSGWVADQLRAA----GHDVELVEITTEGD-VSGGLLTAIGGTGVFA 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 I K L G +D AVHS KD+PT GL ++A RED RDV ++ +L +L + S Sbjct: 59 AAIRKALTDGRVDVAVHSLKDLPTAPEPGLVVAAVPAREDSRDVLVARDGLTLGELPIGS 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GT S RR A L + + RG ++TRL +++ + A++LA AG+ RL + V+ Sbjct: 119 VVGTGSPRRTAQLAALGLGLEIRPIRGNVDTRLRLVSSGEVDAVILARAGLARLGRLDVV 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L+ P+PGQGA+ +E + P E V V+ DT S+ ERA LA L+ C Sbjct: 179 TEVLDPIQVLPAPGQGALAVECRADRPDVLEAVSVLEDADTRASITAERALLAALEAGCT 238 Query: 246 SAIAGFAYCKGS----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 + + A L DG+I S G D ++GR AQ + Sbjct: 239 APVGALAEVVDGEEGLELSLRAFAGTEDGRIDLRRSLTGRYDDPESLGRRLAQILLEDGA 298 Query: 302 KNV 304 ++ Sbjct: 299 ADL 301 >gi|283798144|ref|ZP_06347297.1| hydroxymethylbilane synthase [Clostridium sp. M62/1] gi|291074124|gb|EFE11488.1| hydroxymethylbilane synthase [Clostridium sp. M62/1] gi|295091711|emb|CBK77818.1| hydroxymethylbilane synthase [Clostridium cf. saccharolyticum K10] Length = 298 Score = 304 bits (780), Expect = 1e-80, Method: Composition-based stats. Identities = 101/303 (33%), Positives = 151/303 (49%), Gaps = 7/303 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M KK R+G+R S LA+ A ++ P + ++ + T GDRI N++L +IGG Sbjct: 1 MNKK-VRVGSRDSLLAVRQAELVMEAVRKA--SPETELTLVTMKTTGDRILNQSLDKIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E++ L+ G D +VHS KDMP ++ + L I AY PRED RDV + L + Sbjct: 58 KGLFVKELDLALMEGRSDLSVHSLKDMPMEIPEELPILAYSPREDNRDVLVLREG--LSE 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L H VIGT S RRK R D RG I TRL KL++ + A++LA AG+ R+ Sbjct: 116 LPAHPVIGTGSARRKIQAARIYPDAEFKGIRGNIHTRLRKLDSGEYDALILAAAGMIRMG 175 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++E+ P GQG + ++ ++ + IN + ER+F+ L Sbjct: 176 LQDRISRYFSVEEIIPPAGQGIMAVQGRKDDSY--PFLIKINSPKSQAMAEAERSFVKTL 233 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DG C S IA A +G L G+ + S G+ +GR A ++ Sbjct: 234 DGGCSSPIAACALIEGDRLKLRGLYFEEKSGRWVVGSLEGSVQGPAELGRSLALRLKSEI 293 Query: 301 NKN 303 + Sbjct: 294 EQE 296 >gi|224372609|ref|YP_002606981.1| porphobilinogen deaminase [Nautilia profundicola AmH] gi|223588468|gb|ACM92204.1| porphobilinogen deaminase [Nautilia profundicola AmH] Length = 291 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 105/295 (35%), Positives = 162/295 (54%), Gaps = 11/295 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LAL A +S L + H I + ++T GD+I ++ L EIGGKGLF Sbjct: 2 KLTIATRGSKLALWQAEWVKSKLEKL----GHEIDLKIVTTTGDKILDKPLAEIGGKGLF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKL-LKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E+E+ L+ G+ AVHS KD PT+ ++A RE + DVF+S ++L +L Sbjct: 58 IKEVEEALLKGDAQIAVHSLKDFPTQYETDHFTLAAIPVREAVEDVFLSENFETLAELPH 117 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++V+GTSS+RR L +R D+ + D RG ++TR+NKL + K AI+LA+AG+KRL K Sbjct: 118 NAVVGTSSIRRAMQLKAFRDDLVITDLRGNVDTRINKLKDGKYDAIILAHAGVKRLGLLK 177 Query: 184 --VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+L+ + P+ GQGA+ IET +N+PK E VK +N T V ER F+ L+ Sbjct: 178 SVKYFEVLDTDIMIPAMGQGALGIET-INDPKVIEAVKPLNDFRTQICVTIERDFVDTLN 236 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 C + + +A ++ +L D + + + N G++ A+ Sbjct: 237 LGCHAPVGVYAKIMADDSIKIKAALLKDD--KMIKKEVVISFDEWENAGKEFAKE 289 >gi|322389389|ref|ZP_08062943.1| hydroxymethylbilane synthase [Streptococcus parasanguinis ATCC 903] gi|321143877|gb|EFX39301.1| hydroxymethylbilane synthase [Streptococcus parasanguinis ATCC 903] Length = 307 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 86/303 (28%), Positives = 155/303 (51%), Gaps = 10/303 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + ++GTR S LA+ L + H P + ++P T+GDR+ + +L IGGKG+ Sbjct: 2 RSIKVGTRKSQLAMTQTKMVVERLKECH--PEVDFELVPYKTQGDRLVHVSLQTIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH-TAQSLKDLA 122 F +EIE+ L++ +ID A+HS KD+P+ L+ G I A RED+RD I +L L Sbjct: 60 FVKEIEQALLNKDIDIAIHSLKDVPSILVDGCTIGAIPEREDVRDCLIFREEGMTLATLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSS+RR+ L R+D+ RG I++R+ KL + AI+LA AG+KR+ Sbjct: 120 QGAVVGTSSIRRQVQLQSLRNDLQFKPLRGNIDSRIRKLQEGECDAIVLAAAGLKRIGYL 179 Query: 183 K----VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E L+ + F P+ QGA+ +E ++ + E++ I+ ++ + + ER+FL+ Sbjct: 180 DQSPSLNLEFLDPQTFIPAVSQGALAVECREDDEEVLEILASIHDKEVENCIQLERSFLS 239 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 ++ C + A + ++ + + + + + D + + + Sbjct: 240 LMNADCTFPVGAHAQYIDGHYHLETMLADAKDRCLYVALTSKDGSDLPKLAL---EQLME 296 Query: 299 ISN 301 Sbjct: 297 KGA 299 >gi|294010302|ref|YP_003543762.1| hydroxymethylbilane synthase [Sphingobium japonicum UT26S] gi|292673632|dbj|BAI95150.1| hydroxymethylbilane synthase [Sphingobium japonicum UT26S] Length = 308 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 118/297 (39%), Positives = 168/297 (56%), Gaps = 8/297 (2%) Query: 1 MEK--KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M+K +P R+GTR SPLALA A T ++L H + I+ + T GDRI +R L +I Sbjct: 1 MQKPSRPLRLGTRGSPLALAQAHMTVAALRARHGWDEGAVEIVVVQTSGDRIQDRALADI 60 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGK L+T+E+++ L SGEID AVHS KD+ T ++I+A LPR D+RD + A Sbjct: 61 GGKALWTKELDRALASGEIDFAVHSMKDVETIRPAEIRIAAMLPRADVRDRLVG--ADDF 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L V+GTSS RR A + R R D V+ FRG + TRL +L+ +AHA LLA AG+ R Sbjct: 119 AALPERPVVGTSSPRRAAQVRRLRPDAQVVLFRGNVATRLARLDRGEAHATLLAAAGLDR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + V + ++ P+P QGA+ IET + +L+ I+ DT+D V ERA LA Sbjct: 179 LGQGDVGVA-IPVDVMLPAPSQGAVGIETLSGDEAMLDLLAAISDADTFDCVMAERAVLA 237 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR---NGNRCDAINIGRDA 292 L G+C S IA FA + + +++ DG+ + G+ A +GR Sbjct: 238 GLGGTCHSPIAAFARLEDGQVRLRAEIISPDGRETVGETARIERGDAAAAEAMGRGL 294 >gi|331230279|ref|XP_003327804.1| porphobilinogen deaminase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309306794|gb|EFP83385.1| porphobilinogen deaminase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 461 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 99/336 (29%), Positives = 145/336 (43%), Gaps = 35/336 (10%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IGTR S LAL A + I +ST GD + L +GGK ++T Sbjct: 67 LIIGTRNSKLALVQAESVEREINKRFSSDQIKTEIKSMSTSGDENLLKPLYLLGGKSVWT 126 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLA 122 +E+E L++G ID VHS KD+PT L G ++++ + RED RD I +L L Sbjct: 127 KELEFNLLNGSIDLIVHSLKDVPTSLPAGCELASVMLREDPRDALIIRNGLPFTNLSQLP 186 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLK 180 S+IGTSS+RR A L R +++ D RG ++TR KL+ ++ I+LA AG+KR+ Sbjct: 187 AGSIIGTSSVRRVAQLRRRFPNLAFQDIRGNLQTRFKKLDASDSPYTGIILAVAGLKRIG 246 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIET-----------------HVNNPKAQELVKVINH 223 + I L D + GQGAI IE + LVK + Sbjct: 247 LAERITSYLEPPDLYHAVGQGAIGIEIRTPPEIKLNETVEETILRERATTVRRLVKSLED 306 Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG----------STLYFYGIVLASDGKIF 273 T S ERA L L+G C + + + L G+V + DG Sbjct: 307 WRTALSCEAERALLRRLEGGCSVPVGVTSSLVDLPMPCPWAPKARLTLTGVVTSVDGLEE 366 Query: 274 HEVSRNGNRC---DAINIGRDAAQYIRFISNKNVFN 306 + C DA ++G A + + + Sbjct: 367 VRKEAWLDVCGPKDAAHLGTALADELFRDGADKILD 402 >gi|320010120|gb|ADW04970.1| porphobilinogen deaminase [Streptomyces flavogriseus ATCC 33331] Length = 328 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 94/316 (29%), Positives = 158/316 (50%), Gaps = 17/316 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 P R+GTR S LA+A + ++ +V + ++ ++T GD I+ L +IGG Sbjct: 11 TTTPLRLGTRRSKLAMAQSGMVADAVREVT---GRAVELVEITTYGD-ISREHLAQIGGT 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F + + L+SGE+D AVHS KD+PT +GL ++A PRED RD ++ + L Sbjct: 67 GVFVAALREALLSGEVDFAVHSLKDLPTTQPEGLVLAAVPPREDPRDALVARDGLTFGQL 126 Query: 122 ALHSVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 + IGT S RR A L DI + RG ++TR+ + + + A++LA AG+ Sbjct: 127 PAGARIGTGSPRRMAQLNAYARSHGLDIETVAIRGNVDTRIGFVRSGELDAVVLAAAGLS 186 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL + + + L ++ P+PGQGA+ +E ++ + ++ T +V ERA L Sbjct: 187 RLGRTDEVTDFLPVDTVLPAPGQGALAVECAESSADLAAALAELDDPYTRIAVTAERALL 246 Query: 238 AELDGSCKSAIAGFAYC--KG---STLYFYGIVLASDGKIFHEVSRNGNR----CDAINI 288 L+ C + + A +G + L G+V ++DG ++S G DA + Sbjct: 247 NALEAGCSAPVGALADLLAEGQVVNELRLRGVVGSTDGTSLVQLSITGPVPTSHDDAAAL 306 Query: 289 GRDAAQYIRFISNKNV 304 GR+ A + + Sbjct: 307 GRELAAEMLAKGAAGL 322 >gi|225012137|ref|ZP_03702574.1| porphobilinogen deaminase [Flavobacteria bacterium MS024-2A] gi|225003692|gb|EEG41665.1| porphobilinogen deaminase [Flavobacteria bacterium MS024-2A] Length = 300 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 104/299 (34%), Positives = 151/299 (50%), Gaps = 8/299 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A E ++ L + ++ + + GD+ N+ L +G +G+FT Sbjct: 2 VRIGTRKSKLALWQANEVKAILES----EGYPCCLVHIESNGDQDLNQPLYAMGIQGVFT 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + ++ L++ +ID AVHS KD+PT L KG+ I A L R + DV + + A + Sbjct: 58 KTLDTALLNEKIDIAVHSLKDVPTLLPKGINIKAVLSRGNPMDVLVYNPA--FMGWETEA 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGT SLRRKA LR V + RG ++ R+ KLNN+ + A AG+ RL + Sbjct: 116 SIGTGSLRRKAQWLRKNPKHQVENLRGNLQKRIEKLNNSNWSGAIFAQAGLDRLNLLQDN 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L E P+P QG I I + N + ++ IN +T ER+FL L+G C Sbjct: 176 YEVL--EWMIPAPSQGIIGIASLEKNKELNAVLDKINCAETSLCAQIERSFLNTLEGGCT 233 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I AYC +TLYF G + + DG I N + G AAQ I K + Sbjct: 234 APIGAHAYCIENTLYFKGGLFSLDGTIAIVHEENTPLENTKEYGVKAAQKILNEGGKEL 292 >gi|102139876|gb|ABF70029.1| porphobilinogen deaminase, chloroplast (hydroxymethylbilane synthase) (pre-uroporphyrinogen synthase), putative [Musa acuminata] Length = 328 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 110/301 (36%), Positives = 160/301 (53%), Gaps = 32/301 (10%) Query: 11 RCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 R S LALA A ETR L H + II + T GD I ++ L +IGGKGLFT+EI Sbjct: 54 RDSDLALAQARETRDKLKAAHSELAEEGAVEIIIIKTTGDMILDKPLADIGGKGLFTKEI 113 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128 + L+ G ID AVHS KD+PT L +G + LP Sbjct: 114 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLP-------------------------- 147 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188 +SLRR++ +L + V++ RG ++TRL KL N HA LLA AG+KRL + + I Sbjct: 148 -ASLRRQSQILCRYPSLKVVNLRGNVQTRLTKLKNGDVHATLLALAGLKRLNMVENVTSI 206 Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248 L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FL LDG+C++ I Sbjct: 207 LSMEEMLPAVAQGAIGIACRSNDNKMMEYLSSLNHEDTRSAVACEREFLTVLDGNCRTPI 266 Query: 249 AGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFISNKNVF 305 A +A+ + F G++ + DG +E +R G D + +G+DA ++ + + Sbjct: 267 AAYAHRDKDGSCSFRGLLASPDGSKVYETTRIGPYSFDDMVEMGKDAGHELKAKAGPGFY 326 Query: 306 N 306 + Sbjct: 327 D 327 >gi|302559228|ref|ZP_07311570.1| porphobilinogen deaminase [Streptomyces griseoflavus Tu4000] gi|302476846|gb|EFL39939.1| porphobilinogen deaminase [Streptomyces griseoflavus Tu4000] Length = 319 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 93/317 (29%), Positives = 156/317 (49%), Gaps = 17/317 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K R+GTR S LA+A + + ++ V P + ++ ++T GD ++ L +IGG Sbjct: 1 MTEKALRLGTRRSKLAMAQSGQVAEAVSQVTGRP---VELVEITTYGD-VSREHLAQIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L GE+D AVHS KD+PT L ++A RED RDV ++ A L D Sbjct: 57 TGVFVAALREALARGEVDFAVHSLKDLPTTQPDELVVAAIPVREDPRDVVVARDALKLTD 116 Query: 121 LALHSVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + IGT S RR A L D + RG ++TR+ + A++LA AG+ Sbjct: 117 LPRGARIGTGSPRRMAQLNAYARSHGMDFETVPIRGNVDTRIGYVTKGDLDAVVLAAAGL 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ + + + + L+++ P+PGQGA+ IE +N + ++ T +V ER+ Sbjct: 177 NRVGRSEDVTDFLSVDTVLPAPGQGALAIECTADNAALIAELAELDDPLTRAAVTAERSL 236 Query: 237 LAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNRCD----AIN 287 LA L+ C + + A + G+V +DG ++S G + A+ Sbjct: 237 LAALEAGCSAPVGALADLLADGQIVKEMRLRGVVGTTDGSTLVQLSTTGPVPETHEAAMA 296 Query: 288 IGRDAAQYIRFISNKNV 304 +GR+ A + + Sbjct: 297 LGRELATGMLAQGAAGL 313 >gi|167910007|ref|ZP_02497098.1| porphobilinogen deaminase [Burkholderia pseudomallei 112] Length = 278 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 101/266 (37%), Positives = 153/266 (57%), Gaps = 2/266 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG 270 + +A A +G L+ G V +DG Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDG 276 >gi|21221749|ref|NP_627528.1| porphobilinogen deaminase [Streptomyces coelicolor A3(2)] gi|289770973|ref|ZP_06530351.1| porphobilinogen deaminase [Streptomyces lividans TK24] gi|11386858|sp|Q9WX16|HEM31_STRCO RecName: Full=Porphobilinogen deaminase 1; Short=PBG 1; AltName: Full=Hydroxymethylbilane synthase 1; Short=HMBS 1; AltName: Full=Pre-uroporphyrinogen synthase 1 gi|5123663|emb|CAB45352.1| putative porphobilinogen deaminase [Streptomyces coelicolor A3(2)] gi|289701172|gb|EFD68601.1| porphobilinogen deaminase [Streptomyces lividans TK24] Length = 319 Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats. Identities = 90/317 (28%), Positives = 160/317 (50%), Gaps = 17/317 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K R+GTR S LA+A + + ++ V P + ++ ++T GD + L +IGG Sbjct: 1 MTEKALRLGTRRSKLAMAQSGQVADAVSQVTGRP---VELVEITTYGDT-SREHLAQIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + L+ GE+D AVHS KD+PT +GL ++A RED RDV ++ A+ L D Sbjct: 57 TGVFVAALRDALLRGEVDFAVHSLKDLPTAQHEGLVVAAIPEREDPRDVVVARDARKLTD 116 Query: 121 LALHSVIGTSSLRRKALLLRW----RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + +GT + RR A L + +I + RG ++TR+ + + + A++LA AG+ Sbjct: 117 LPRGARVGTGAPRRMAQLNAYARTHGMEIETVPIRGNVDTRIGYVRSGELDAVVLAAAGL 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ + + + L+++ P+PGQGA+ +E +N + ++ T +V ER+ Sbjct: 177 NRVGRIDEVTDFLSVDTVLPAPGQGALAVECAADNASLIAALAELDDPFTRAAVTAERSL 236 Query: 237 LAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNRCD----AIN 287 LA L+ C + + A + G+V +DG ++S G + A+ Sbjct: 237 LAALEAGCSAPVGALADLLADGQTVKEMRLRGVVGTTDGSTLVQLSTTGPVPETHEAALA 296 Query: 288 IGRDAAQYIRFISNKNV 304 +G + A + + Sbjct: 297 LGGELAAEMLAQGAAGL 313 >gi|226228000|ref|YP_002762106.1| porphobilinogen deaminase [Gemmatimonas aurantiaca T-27] gi|226091191|dbj|BAH39636.1| porphobilinogen deaminase [Gemmatimonas aurantiaca T-27] Length = 309 Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats. Identities = 109/310 (35%), Positives = 160/310 (51%), Gaps = 10/310 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M P RIGTR S LAL A + + L D +P ++ +T GDRI +R L+ IG Sbjct: 1 MMTVPVRIGTRSSELALRQARQVAAQL-DARGVPS---ELVEYTTLGDRILDRPLSAIGE 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117 KGLFT E+E L++G IDCAVHS KD+PT +G+ + A L RED RD + S Sbjct: 57 KGLFTAELEADLLAGRIDCAVHSLKDLPTADPQGIIVVALLEREDPRDALVVRAGVDAHS 116 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L + +GTSSLRR+A L RSD+ V + RG + TRL KL+ + A LLA AG+ Sbjct: 117 LDTLPEGARVGTSSLRRRAQLQALRSDLEVCELRGNVGTRLRKLDEGQVDAALLAAAGLH 176 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I L+ ++ +PGQGAI ++ ++ + ++H T +V ERA L Sbjct: 177 RLGLADRIVAYLDAPEWLSAPGQGAIAVQGRADDEALLSTLSSLDHAPTRVAVTAERALL 236 Query: 238 AELDGSCKSAIAGFAYCKGSTL--YFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 A L+G C+ I A + + ++++ DG + + G + A+ Sbjct: 237 AALEGGCQVPIGA-AVLEEPEYGTILHAVIVSLDGSSAVRGGYPVDHANPAASGIELARQ 295 Query: 296 IRFISNKNVF 305 +R + Sbjct: 296 LRAAGGAQIL 305 >gi|87306341|ref|ZP_01088488.1| porphobilinogen deaminase [Blastopirellula marina DSM 3645] gi|87290520|gb|EAQ82407.1| porphobilinogen deaminase [Blastopirellula marina DSM 3645] Length = 308 Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats. Identities = 107/304 (35%), Positives = 160/304 (52%), Gaps = 7/304 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A L V ++ II ++T+GD +T L IGG+G+FT Sbjct: 4 IRIGTRGSQLAQWQANWVADQLRAV----GTDVEIIHIATQGD-VTQGPLDLIGGRGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EI+ L+ ID AVHS KD+PT+ + GL+++A R DV I+ A + L S Sbjct: 59 TEIQAALLDNRIDVAVHSLKDLPTEAVVGLRLAAVPARGADGDVLITSKASDVLGLPQES 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +IGT S+RRKA LL R D + D RG ++TRL KL++ AI+LA AG++RL+ + I Sbjct: 119 IIGTGSMRRKAQLLHLRRDFQIRDIRGNLDTRLRKLDDGLYDAIILAEAGLRRLELIERI 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ P+ GQGA+ +E + ++ +NHED+ SV ER+ L L G C Sbjct: 179 RHVIPKAQMLPAVGQGALGLEIRERDSATAAMLAPLNHEDSHYSVLAERSMLRNLRGGCL 238 Query: 246 SAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 + + + L+ G+V++ DG S G A +IGR A + + Sbjct: 239 APVGAWGRIDPIKQLLFLDGVVVSGDGHHKVTASACGPPNRAEDIGRQVADQLAIQGAER 298 Query: 304 VFNF 307 + F Sbjct: 299 LIAF 302 >gi|297190129|ref|ZP_06907527.1| porphobilinogen deaminase 2 [Streptomyces pristinaespiralis ATCC 25486] gi|197721156|gb|EDY65064.1| porphobilinogen deaminase 2 [Streptomyces pristinaespiralis ATCC 25486] Length = 311 Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats. Identities = 97/304 (31%), Positives = 147/304 (48%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L +H P ++P+ T GD+ L+ + GKG FT Sbjct: 7 IRIVSRDSPMALAQVERVRAELAALH--PGIRTEVVPVKTTGDKWMGD-LSLVEGKGAFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +A+L R+D+RD I +L +L Sbjct: 64 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTVFAAFLERDDVRDALIHPGGLTLDELPE 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSS+RR A L + + RG RL KL A A+LLA +G++R+ + Sbjct: 124 GARIGTSSVRRIAQLAVSHPHLECVPMRGNANRRLEKLAAGDADALLLAVSGLERIGRTD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI + L+ + P G G + ++ + + V + H T V ER FL L G Sbjct: 184 VITQTLSTDVMCPPIGAGVLALQCREGDSALIDTVSDLGHPGTHREVTAERMFLHVLQGH 243 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG+A + L V + DGK+ R D +G A + + Sbjct: 244 CNSPIAGYARSERNGELSLRAKVFSPDGKVILNAHEWAGRLDPATLGTSVAVALLRQGAR 303 Query: 303 NVFN 306 + + Sbjct: 304 ELID 307 >gi|308063099|gb|ADO04986.1| porphobilinogen deaminase [Helicobacter pylori Sat464] Length = 306 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 99/302 (32%), Positives = 156/302 (51%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ERAF+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKNHKHFAT-LQKLNDEESAFCCHLERAFVKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A+++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKNKALDLVQELLEAFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|188527044|ref|YP_001909731.1| porphobilinogen deaminase [Helicobacter pylori Shi470] gi|238058919|sp|B2US69|HEM3_HELPS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|188143284|gb|ACD47701.1| porphobilinogen deaminase [Helicobacter pylori Shi470] Length = 306 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 99/302 (32%), Positives = 155/302 (51%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKEC---SIESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E ++ ++ +N E++ + ERAF+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKSHKHFAT-LQKLNDEESAFCCHLERAFVKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK R G++ A ++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIRAVLGLPNGKEVIAKERQGDKTKAFDLVQELLEAFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|312129517|ref|YP_003996857.1| hydroxymethylbilane synthase [Leadbetterella byssophila DSM 17132] gi|311906063|gb|ADQ16504.1| hydroxymethylbilane synthase [Leadbetterella byssophila DSM 17132] Length = 300 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 101/303 (33%), Positives = 163/303 (53%), Gaps = 11/303 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA+ A +S L I+ + TKGD++ + L++IG KG+F Sbjct: 2 KIRIGTRVSLLAMWQANYIKSRLEAAGA----ETEIVGMETKGDKVLDVALSKIGSKGVF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 TEE+E+KL++GEI AVHSAKDM + L + ++ A+ RE DV ++ A DL+ Sbjct: 58 TEELEEKLLNGEIHIAVHSAKDMQSSLAEDFELIAFTEREYPGDVLVADRAL---DLSAP 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IGTSS+RR A + I +++ RG ++TR+ K+ + + + LAYAG+ R++ +++ Sbjct: 115 ITIGTSSVRRIAFFKKHYPHIKLVNMRGNLQTRIQKMRSGQCDGLALAYAGVHRMEYDEL 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVK-VINHEDTWDSVNCERAFLAELDG 242 I ++ F P GQG + +E N + + VK N E+T+ + ERAFL E++G Sbjct: 175 IVHRFPLDQFIPPVGQGTVTVEIAKNLDENIKTFVKNTCNDENTYKCLQAERAFLKEMNG 234 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C + G A +G + F G + +G + G D I +G+ AA+ + Sbjct: 235 GCSIPVFGHATLEGEEILFKGGITNLEGTEEVSMEFRGT--DPILLGQHAAEQVLQNGGA 292 Query: 303 NVF 305 + Sbjct: 293 EIL 295 >gi|58617102|ref|YP_196301.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Gardel] gi|58416714|emb|CAI27827.1| Porphobilinogen deaminase [Ehrlichia ruminantium str. Gardel] Length = 299 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 112/300 (37%), Positives = 168/300 (56%), Gaps = 5/300 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +GTR S LA+A A + + L + P N+ I+ + T GD +L+EIGG Sbjct: 1 MNSMNVYLGTRGSILAIAQAMKVKKLL--YNYFPDINVQIVHIVTSGDINDKISLSEIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L++G ID AVHS KD+P L I L R DVFIS QSL+ Sbjct: 59 KGLFLKELEEALLTGTIDLAVHSMKDVPAFYCDSLVIPCILKRSSPYDVFISSKYQSLRS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++VIGTSS+RRK L+R S + V+ RG ++TR+ KL + I+LA AG+ R+ Sbjct: 119 LPDNAVIGTSSIRRKVQLMRLLSSVQVVPIRGNVDTRILKLEAGQYDGIILAKAGLMRIN 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K VIKE+L+ + + GQGAI I+ N+ K +++K++N + ++ SV ER+F+ + Sbjct: 179 KTHVIKEVLDPQVMLSAVGQGAIGIQCRANDYKMIDMIKILNCKKSYISVAAERSFMKTV 238 Query: 241 DGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +GSC + +A A Y TLY ++ + +F N CDA G + + Sbjct: 239 NGSCDTPLAALAKYVNSDTLYMSCMLSNEEKTVF--SDCYFNECDAEISGINMGNDLMDQ 296 >gi|25026992|ref|NP_737046.1| porphobilinogen deaminase [Corynebacterium efficiens YS-314] gi|259508525|ref|ZP_05751425.1| hydroxymethylbilane synthase [Corynebacterium efficiens YS-314] gi|39931582|sp|Q8FSF7|HEM3_COREF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|23492272|dbj|BAC17246.1| putative hydroxymethylbilane synthase [Corynebacterium efficiens YS-314] gi|259163875|gb|EEW48429.1| hydroxymethylbilane synthase [Corynebacterium efficiens YS-314] Length = 299 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 86/305 (28%), Positives = 139/305 (45%), Gaps = 10/305 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA A R L + + + ++T GD N + E G G+F Sbjct: 2 TLRIGTRGSKLATTQAGHMRDRLKHFGR----DAELTIVTTPGDV--NMSPVERIGVGVF 55 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+ + L++ EID AVHS KD+PT R D RD I+ +L++L Sbjct: 56 TQALRDALVADEIDVAVHSFKDLPTA-PDPRFHLVVPTRADARDALIARDGLTLEELPEG 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTS+ RR + L R D+ ++ RG I+TR+ K+ + + A++LA+AG+ R+ + Sbjct: 115 AKVGTSAPRRISQLKALRPDLEILPLRGNIDTRMGKVTSGELDAVVLAFAGLSRVGMQDR 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ + + P+P QGA+ IE V + + ++ H DT+ + ER L L+ C Sbjct: 175 ATQVFDPDMLMPAPAQGALAIECRVEDEDIITGLNMLMHADTYVTAVAERTVLNRLEAGC 234 Query: 245 KSAIAGFAYCK---GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 + +A A G T+ V A DG S G + A + Sbjct: 235 TAPVAAHATLDGYAGDTMTLTAGVFALDGSEQLVFSAQGAGERPEELAEQVAAQLIEQGA 294 Query: 302 KNVFN 306 + Sbjct: 295 ATLLG 299 >gi|259489684|tpe|CBF90157.1| TPA: hydroxymethylbilane synthase, putative (AFU_orthologue; AFUA_5G11760) [Aspergillus nidulans FGSC A4] Length = 347 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 96/319 (30%), Positives = 148/319 (46%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K F IGTR S LAL ++L + + P + I T GD+ T L + K Sbjct: 14 SQKIFTIGTRKSKLALLQTDLVLAALKE--RFPDYTFKIHSRETAGDQNTTIALRDFTTK 71 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118 L+T+E+E L +G +D VHS KD+PT L + + RED RD + SL Sbjct: 72 NLWTQELEDLLEAGSVDLIVHSLKDVPTLLPTSCTLGPMMKREDSRDGLVIKKGLPNMSL 131 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGI 176 ++ SV+GTSS+RR A L R + V+D RG I TRL KL+ ++LA AG+ Sbjct: 132 AEMPAGSVVGTSSIRRTAQLARKYPHLKVMDVRGNIGTRLAKLDAEDSPYTCLILAAAGL 191 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 RL I + L+ + + GQGA+ IE + ++++ I H++T + ER Sbjct: 192 LRLGLGDRIYQYLDSRNAGMLYAVGQGALGIEIRKGDKAMEDILNTIGHKETTFACLAER 251 Query: 235 AFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNG---NRCDAI 286 + L L+G C + + T L +V++ DG EV +G + A Sbjct: 252 SLLRTLEGGCSAPLGVETEWIQDTNGSSKLRMRSVVVSVDGSEHAEVEIDGTVDSPQSAE 311 Query: 287 NIGRDAAQYIRFISNKNVF 305 G A+ + + Sbjct: 312 EFGVTVAKALVNEGAGKIL 330 >gi|124268186|ref|YP_001022190.1| hydroxymethylbilane synthase [Methylibium petroleiphilum PM1] gi|124260961|gb|ABM95955.1| hydroxymethylbilane synthase [Methylibium petroleiphilum PM1] Length = 317 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 102/315 (32%), Positives = 155/315 (49%), Gaps = 27/315 (8%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 I TR S LAL A R+ L P + ++ ++T+GD+I +RTL+++GGKGLF +E Sbjct: 10 IATRESRLALWQAEHVRALLGSRLVEP---VELLGMTTRGDQILDRTLSKVGGKGLFVKE 66 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 +E L +G+ AVHS KD+P L G ++A L RED RD ++S L L +V+ Sbjct: 67 LETALEAGDAHLAVHSLKDVPMDLPAGFVLAAVLEREDPRDAWVSPRYADLAALPAGAVV 126 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR + L R D+ + RG ++TRL KL+ + AI+LA AG+KRL + I+ Sbjct: 127 GTSSLRRLSQLRARRPDLRIEPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGLAERIRS 186 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPK----AQELVKVINHEDTWDSVNCERAFLAELDGS 243 + + P+ GQGA+ IE + P+ ++ + HE +W +V+ ERA L GS Sbjct: 187 VFEADAMIPAAGQGALGIELRADAPERHPALWAALRALTHEPSWLAVHAERAVSRALGGS 246 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAI------------NIGR 290 C +A A + L + + A +G Sbjct: 247 CSMPLAAHAQWQADGRLVLRAALGSV-------AEAAPALVHAEAGAAVADTAAAEALGL 299 Query: 291 DAAQYIRFISNKNVF 305 AQ +R + Sbjct: 300 AVAQQLRQRGGDALL 314 >gi|255953953|ref|XP_002567729.1| Pc21g06870 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589440|emb|CAP95584.1| Pc21g06870 [Penicillium chrysogenum Wisconsin 54-1255] Length = 339 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 100/320 (31%), Positives = 150/320 (46%), Gaps = 17/320 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K IGTR S LAL +L P + I T GD T L + K Sbjct: 7 TQKTITIGTRKSKLALLQTNLVLDALKKA--FPQYEYKIFSKETAGDLNTTIALRDFNTK 64 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 L+TEE+E+ +I G++D VHS KD+PT L ++ +PRED RDV + +SL Sbjct: 65 NLWTEELEELMIDGQVDIIVHSLKDVPTTLPSSCKLGPSMPREDSRDVLVVKQGLPYKSL 124 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGI 176 ++ SV+GTSS+RR A L R + V D RG I TRL+KL+ I+LA AG+ Sbjct: 125 SEIPAGSVVGTSSIRRTAQLARKYPHLKVQDVRGNIGTRLSKLDAEDSPYACIILAAAGL 184 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 RL I + L+ ++ + GQGA+ IE + +++ I H+DT SV ER Sbjct: 185 LRLDLADRITQYLDSKNSGMLYAVGQGALGIEIRKEDTVLHDMLDKIGHQDTTFSVLAER 244 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGN---RCDAI 286 + L L+G C + + + L +V++ DGK +V + A Sbjct: 245 SLLRTLEGGCSAPLGVETGWVQNAQGAKQLRMRSVVVSVDGKECAQVELEADVTSAESAE 304 Query: 287 NIGRDAAQYIRFISNKNVFN 306 G A+ + ++ Sbjct: 305 AFGITVAKALVADGAGDILQ 324 >gi|255534181|ref|YP_003094552.1| Porphobilinogen deaminase [Flavobacteriaceae bacterium 3519-10] gi|255340377|gb|ACU06490.1| Porphobilinogen deaminase [Flavobacteriaceae bacterium 3519-10] Length = 311 Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats. Identities = 98/304 (32%), Positives = 157/304 (51%), Gaps = 9/304 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +IGTR SPLAL A E L + H I P+ +KGD+ ++ L +G Sbjct: 8 SMRSIKIGTRNSPLALWQAREVARHLQNN----NHTTDITPIISKGDKNLSQPLYTLGIT 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT++++ L++ E+D AVHS KD+PT+L + ++I A L R+ +DV + + +L Sbjct: 64 GIFTKDLDIALLNNEVDIAVHSLKDIPTQLPENVEIIAVLQRDYPQDVLVRKKDAATLEL 123 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 I TSSLRR+A L+ D RG ++TRL KL N A + + A I+R+ Sbjct: 124 HQ-LKIATSSLRRRAFWLKEFPGTEFSDIRGNVQTRLTKLEENDFDATMFSLAAIERMGL 182 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 V E L + P+P QG + + N+P+ +EL K INH +T ++ ER+FL+ L+ Sbjct: 183 S-VDYEHLPL--MIPAPAQGVVAVCARSNDPEIKELFKEINHRETRICIDIERSFLSTLE 239 Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C + I FA + F G + + DG+ E + + G+ A+ I Sbjct: 240 GGCTAPIGAFAEINDLGEVRFTGRICSLDGQNCIETDEIFAWNEHDDFGKILAEKILQNG 299 Query: 301 NKNV 304 + + Sbjct: 300 GREL 303 >gi|110801892|ref|YP_698741.1| porphobilinogen deaminase [Clostridium perfringens SM101] gi|123047375|sp|Q0ST16|HEM3_CLOPS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|110682393|gb|ABG85763.1| hydroxymethylbilane synthase [Clostridium perfringens SM101] Length = 291 Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats. Identities = 99/292 (33%), Positives = 157/292 (53%), Gaps = 6/292 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LA + L + ++++ T+GDR + +L +IGGKGLF Sbjct: 3 LIIATRKSKLAQVQTEKVMELLKKKENVDSKKLLVM---TEGDRRLDVSLNKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L + Sbjct: 60 KEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI Sbjct: 120 RIGTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + + F P+ GQGA+ IE + + + K ++ ++ +V ER+F+ L+G C Sbjct: 180 SDYFDPKVFLPAIGQGALGIECL-KDGEFNDYFKALDSKEVRTTVEAERSFMKVLNGGCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 S I ++ K + LY G + +I + GN+ D I +G+ A+ I Sbjct: 239 SLIGAYSEVKDNDLYMIGT-FTVNNRIVKKD-ILGNKEDNILLGKKLAEKIL 288 >gi|296108387|ref|YP_003620088.1| hydroxymethylbilane synthase [Legionella pneumophila 2300/99 Alcoy] gi|295650289|gb|ADG26136.1| hydroxymethylbilane synthase [Legionella pneumophila 2300/99 Alcoy] Length = 284 Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats. Identities = 91/277 (32%), Positives = 146/277 (52%), Gaps = 1/277 (0%) Query: 30 VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPT 89 V + P +I ++P+ T GDR L GGKGLF +E+E+ L+ D AVHS KDMP Sbjct: 3 VKQWPNLSIELLPMITSGDRFLKDKLLSAGGKGLFVKELEEALLDKRADLAVHSTKDMPA 62 Query: 90 KLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVID 149 +L GL ++A R++ D IS +SL L +++IGTSSLRR++ LL + ++ + Sbjct: 63 QLPDGLLLAAICKRDNPFDALISPQFKSLDALPKNAIIGTSSLRRQSQLLAYNPNLQIKT 122 Query: 150 FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209 RG I TRL+KL + + AI+LA AG++R+ I +++ + P+ QGA+CIE Sbjct: 123 LRGNIHTRLSKLESGEYQAIILAAAGLERMGLAHHITQLIPDDIMLPTCAQGALCIECRT 182 Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLAS 268 ++ + QEL+ +N + V+ ER A+L G+C A + + L VL Sbjct: 183 DDLEIQELIHGLNDPISALCVHTERRVNAKLGGNCHIPFAVYCTITEEKRLLLRAKVLNM 242 Query: 269 DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 DG + + G +A I + + ++ Sbjct: 243 DGSQMIDDEQQGKIAEAEVIADRCTESLMTKGAMSLL 279 >gi|256783360|ref|ZP_05521791.1| porphobilinogen deaminase [Streptomyces lividans TK24] Length = 311 Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats. Identities = 98/304 (32%), Positives = 146/304 (48%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT Sbjct: 7 IRIVSRDSPMALAQVERVRAELAALH--PGVRTEVVPVRTTGDKWLGD-LSQVEGKGAFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L+SGE D AVH KD+P L G +A+L R+D+RD + +L +L Sbjct: 64 KEVDAALLSGEADLAVHCVKDVPADRPLPAGTVFAAFLKRDDVRDALVHPDGLTLDELPD 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSS+RR A L + + FRG RL KL +A A+LLA +G++R+ + Sbjct: 124 GTRVGTSSVRRVAQLAATHPHLRCVPFRGNANRRLAKLAAGEADALLLAVSGLERIGRTD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI E+L+ E P G G + ++ + E V + T ER FL L G Sbjct: 184 VISEVLSTETMMPPIGAGILALQCREGDRALIEAVSALGDPRTHREATAERMFLHVLQGH 243 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG A L V DGK+ R D +G A + + Sbjct: 244 CNSPIAGHAQVDRSGELSLRACVFTPDGKVRLNAHEWAGRLDPATLGTSVAVALLRQGAR 303 Query: 303 NVFN 306 + + Sbjct: 304 EIID 307 >gi|148284479|ref|YP_001248569.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Boryong] gi|167008815|sp|A5CDH4|HEM3_ORITB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|146739918|emb|CAM79909.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Boryong] Length = 298 Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats. Identities = 110/293 (37%), Positives = 162/293 (55%), Gaps = 7/293 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+G+R S LAL A + D+ N +IIP+ T GD I N+ L +IGGKGLF Sbjct: 2 IIRVGSRASRLALIQAQAVVQKINDLL---GLNAIIIPIKTTGDLIQNKNLYDIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE L++ ID AVHS KD+P L GLQ++A L R D+ D+ +S A + DL L Sbjct: 59 LKEIEYALLNNTIDIAVHSLKDVPAYLPDGLQLAAVLERGDVGDMLVSKIANKITDLPLG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183 +++GTSS+RR+ LL R D++++ FRG ++TR NK+ NN+ A +LA AG++RL + Sbjct: 119 AIVGTSSVRRRIQLLMLRPDLNIVLFRGNVDTRWNKIINNEVDATVLAAAGLQRLNYDTS 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ + P+ GQGAI IE ++ L INH+ TW + ER +L L+ Sbjct: 179 RFCNIIPQSEMLPAIGQGAIAIEARKDDKLIMPLCAKINHQLTWQLIQVERGYLKTLNAD 238 Query: 244 CKSAIAGFAYCKGSTLYFYG--IVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 C I G A G+ F ++ + + F G +IG +AA+ Sbjct: 239 CNVPIGGIASYIGNN-SFEAKFMLGDYNMRYFFYSEVRGKLQHGYDIGVEAAK 290 >gi|317177053|dbj|BAJ54842.1| porphobilinogen deaminase [Helicobacter pylori F16] Length = 306 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKEC---SMESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ER F+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKNHKHFAT-LQKLNDEESAFCCHLEREFVKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A+++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKALDLVQELLEAFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|328883227|emb|CCA56466.1| Porphobilinogen deaminase [Streptomyces venezuelae ATCC 10712] Length = 328 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 89/326 (27%), Positives = 154/326 (47%), Gaps = 26/326 (7%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ R+GTR S LA+A + ++ + P + ++ ++T GD + L +IGG Sbjct: 1 MTERALRLGTRRSKLAMAQSGHVADAVRRLTGRP---VELVEITTYGDT-SREHLAQIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + L++ E+D AVHS KD+PT L ++A RED RDV I+ +L Sbjct: 57 TGVFVAALRDALLADEVDFAVHSLKDLPTAQHPDLVLAAIPEREDPRDVLIARDGLTLDR 116 Query: 121 LALHSVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + +GT S RR A L DI+ + RG ++TR+ + + A++LA AG+ Sbjct: 117 LPEGARVGTGSPRRMAQLHAYARNHGLDITCVPIRGNVDTRVGYVRKGELDAVVLAAAGL 176 Query: 177 KRLK-----KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 R+ + E L ++ P+PGQGA+ +E +N + + ++ T +V Sbjct: 177 NRIGGTDELLGGLSAEPLPVDTVLPAPGQGALAVECLASNTELVAALAPLDDPLTRAAVT 236 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNR 282 ER+ LA L+ C + + A + G+V +DG ++S G Sbjct: 237 AERSLLAALEAGCSAPVGALADLLADDPGHGQVVTEMRLRGVVGTTDGSTLVQLSTTGPV 296 Query: 283 ----CDAINIGRDAAQYIRFISNKNV 304 +A+ +GR+ A + + Sbjct: 297 PTSHDEAMALGRELADEMLAKGAAGL 322 >gi|317179367|dbj|BAJ57155.1| porphobilinogen deaminase [Helicobacter pylori F30] Length = 306 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 97/302 (32%), Positives = 154/302 (50%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKEC---SIESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E ++ ++ +N E++ + ER F+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKSHKHFAT-LQKLNDEESAFCCHLERKFIKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A ++ ++ + K + Sbjct: 240 QIPIGVHASLTGDRVKIRAVLGLPNGKEVITKEKQGDKTRAFDLIQELLEAFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|21225618|ref|NP_631397.1| porphobilinogen deaminase [Streptomyces coelicolor A3(2)] gi|289767234|ref|ZP_06526612.1| porphobilinogen deaminase [Streptomyces lividans TK24] gi|11386841|sp|Q9KY00|HEM32_STRCO RecName: Full=Porphobilinogen deaminase 2; Short=PBG 2; AltName: Full=Hydroxymethylbilane synthase 2; Short=HMBS 2; AltName: Full=Pre-uroporphyrinogen synthase 2 gi|8246838|emb|CAB92889.1| porphobilinogen deaminase [Streptomyces coelicolor A3(2)] gi|289697433|gb|EFD64862.1| porphobilinogen deaminase [Streptomyces lividans TK24] Length = 313 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 98/304 (32%), Positives = 146/304 (48%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT Sbjct: 9 IRIVSRDSPMALAQVERVRAELAALH--PGVRTEVVPVRTTGDKWLGD-LSQVEGKGAFT 65 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L+SGE D AVH KD+P L G +A+L R+D+RD + +L +L Sbjct: 66 KEVDAALLSGEADLAVHCVKDVPADRPLPAGTVFAAFLKRDDVRDALVHPDGLTLDELPD 125 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSS+RR A L + + FRG RL KL +A A+LLA +G++R+ + Sbjct: 126 GTRVGTSSVRRVAQLAATHPHLRCVPFRGNANRRLAKLAAGEADALLLAVSGLERIGRTD 185 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI E+L+ E P G G + ++ + E V + T ER FL L G Sbjct: 186 VISEVLSTETMMPPIGAGILALQCREGDRALIEAVSALGDPRTHREATAERMFLHVLQGH 245 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG A L V DGK+ R D +G A + + Sbjct: 246 CNSPIAGHAQVDRSGELSLRACVFTPDGKVRLNAHEWAGRLDPATLGTSVAVALLRQGAR 305 Query: 303 NVFN 306 + + Sbjct: 306 EIID 309 >gi|160879516|ref|YP_001558484.1| porphobilinogen deaminase [Clostridium phytofermentans ISDg] gi|160428182|gb|ABX41745.1| porphobilinogen deaminase [Clostridium phytofermentans ISDg] Length = 295 Score = 302 bits (775), Expect = 4e-80, Method: Composition-based stats. Identities = 93/294 (31%), Positives = 146/294 (49%), Gaps = 6/294 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LA+ + S+ H +I + T GD I +++L +IGGKGL Sbjct: 2 RIIRIGSRESELAVRQSRILIDSIKQYHN--EIETELITMKTTGDIILDKSLDKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E++ LI G D +VHS KDMP + + L I A+ RED RD + + ++ Sbjct: 60 FVKELDLALIEGRSDLSVHSLKDMPMETPEELPILAFSKREDPRDALVLPLGCT--EIDP 117 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 IG SS RR L + + RG + TRL KL+ + A++LA AG+KRL E Sbjct: 118 VLPIGCSSQRRMLQLKKIYPGANYKGIRGNVLTRLEKLDRGEYGALVLAAAGLKRLGLES 177 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I I E+ P+ GQG + ++ ++ E +K ++E+ CERAF+ L+G Sbjct: 178 RISRIFTTEEIIPAAGQGILAVQGRAG--ESYEFLKQFHNEEATFQAVCERAFVKTLNGG 235 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C S +A +A + + G+ + + G + DA +G A +R Sbjct: 236 CSSPVAAYAKVEDEMITVTGLYFDEITGDYITGNLTGKKEDAEQLGEMLANKLR 289 >gi|54027143|ref|YP_121385.1| porphobilinogen deaminase [Nocardia farcinica IFM 10152] gi|61213309|sp|Q5YP70|HEM3_NOCFA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|54018651|dbj|BAD60021.1| putative porphobilinogen deaminase [Nocardia farcinica IFM 10152] Length = 346 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 91/310 (29%), Positives = 148/310 (47%), Gaps = 15/310 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA+ A R +L+ + ++ + T GD ++ + +IG G+F Sbjct: 9 PLRIGTRGSLLAMTQAGTVRDALIAAGRPA----ELVVVKTPGDMSSD-PVQKIG-VGVF 62 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T + +L +G ID AVHS KD+PT I+A PRED RD ++ L +L Sbjct: 63 TSALRDELAAGTIDLAVHSYKDLPTAPDPRFVIAAIPPREDPRDALVARDGLVLGELPAG 122 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTS+ RR A L + ++ RG +++RL ++ + + A+++A AG+ R+ + V Sbjct: 123 AKVGTSAPRRVAQLRALGLGLDIVPLRGNLDSRLARVTDGELDAVVVARAGLSRIGRTAV 182 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L P+P QGA+ +E + E + ++ T +V ERA LAEL+ C Sbjct: 183 ITEALEPVQMLPAPAQGALAVECRSEDAALIEALAELDDAATRAAVVAERALLAELEAGC 242 Query: 245 KSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 + + A L G A DG S G+ A +GR A+ Sbjct: 243 TAPVGALAEVVESLDDDGRIVEELSLRGCAAAVDGSEVLRASVVGDPERAAELGRALARE 302 Query: 296 IRFISNKNVF 305 + + + + Sbjct: 303 LLELGARELL 312 >gi|261837684|gb|ACX97450.1| porphobilinogen deaminase [Helicobacter pylori 51] Length = 306 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 99/302 (32%), Positives = 155/302 (51%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ERAF+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKNHKHFAT-LQKLNDEESAFCCHLERAFIKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A ++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEAFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|319946908|ref|ZP_08021142.1| hydroxymethylbilane synthase [Streptococcus australis ATCC 700641] gi|319746956|gb|EFV99215.1| hydroxymethylbilane synthase [Streptococcus australis ATCC 700641] Length = 307 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 89/303 (29%), Positives = 154/303 (50%), Gaps = 10/303 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + ++GTR S LA+ L + H P ++P T+GDR+ + +L IGGKG+ Sbjct: 2 RSIKVGTRKSQLAMTQTKMMVDRLKECH--PDVEFELVPYKTQGDRLVHVSLQTIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH-TAQSLKDLA 122 F +EIE+ L++ +ID A+HS KD+P+ L+ G I A RED+RD I +L L Sbjct: 60 FVKEIEQALLNRDIDIAIHSLKDVPSILVDGCTIGAIPEREDVRDCLIYREEGMTLATLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSS+RR+ L R+D+ RG I++R+ KL + AI+LA AG+KR+ Sbjct: 120 QGAVVGTSSIRRQVQLQSLRNDLQFKPLRGNIDSRIRKLQEGECDAIVLAAAGLKRIGYL 179 Query: 183 K----VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E LN +F P+ QGA+ IE ++ + E++ I+ ++ + + ER FL+ Sbjct: 180 DQSPSLNIEFLNPHEFIPAVSQGALAIECREDDEEVLEILASIHDKEVENCIQLERCFLS 239 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 ++ C + A + ++ + + + D ++ + A + + Sbjct: 240 LMNADCTFPVGAHAQYIDGHYHLETMLADAKDRCLY---VALTSKDGSDLPKRALEQLME 296 Query: 299 ISN 301 Sbjct: 297 KGA 299 >gi|297379462|gb|ADI34349.1| porphobilinogen deaminase [Helicobacter pylori v225d] Length = 306 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 99/303 (32%), Positives = 155/303 (51%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IG+R S LAL A + L I + TKGD+I + L +IGGKGLF Sbjct: 3 KLVIGSRGSELALWQANHIKERLKKEC---SIESEIQIVKTKGDKILDTPLNKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L Sbjct: 60 TKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183 + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 120 AKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ERAF+ L+G Sbjct: 180 KYRKAFSVEEMIPSMGQGALGVEMLKNHKHFAT-LQKLNDEESAFCCHLERAFVKGLNGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I A G + ++ +GK + G++ A ++ ++ + K Sbjct: 239 CQIPIGVHASLMGDRVKIQAVLGLPNGKEAIAKEKQGDKTKAFDLVQELLEAFLQSGAKE 298 Query: 304 VFN 306 + Sbjct: 299 ILE 301 >gi|261839094|gb|ACX98859.1| porphobilinogen deaminase [Helicobacter pylori 52] Length = 306 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 97/302 (32%), Positives = 154/302 (50%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E ++ ++ +N E + + ER F+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKSHKHFAT-LQKLNDEKSAFCCHLEREFVKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A+++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVITKEKQGDKTKALDLVQELLEAFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|226305131|ref|YP_002765089.1| porphobilinogen deaminase [Rhodococcus erythropolis PR4] gi|226184246|dbj|BAH32350.1| porphobilinogen deaminase [Rhodococcus erythropolis PR4] Length = 324 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 15/312 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA A R +L+ H ++ + TKGD+ T+ + +IG G+F Sbjct: 11 PLRIGTRGSLLATTQAGTVRDALIAA----GHPAELVIIKTKGDQSTD-PVQKIG-VGVF 64 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T E+ + L+ +D AVHS KD+PT I+A PRED RD ++ L +L Sbjct: 65 TAELREALLDNRVDVAVHSYKDLPTAQDPRFVIAAIPPREDPRDALVARDGLVLGELPAG 124 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S +GTS+ RR + L + ++ RG ++ RL K+ + + A++LA AG+ R+ + Sbjct: 125 SKVGTSAPRRVSQLKALGLGLDIVPLRGNLQRRLGKVESGELDAVILARAGLSRIGLLDL 184 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E + P+P QGA+ +E N + ++ + T +V ERA LAEL+ C Sbjct: 185 ITENIEPVQMLPAPAQGALAVECLSANVELAAILAEHDDAGTRAAVTAERALLAELEAGC 244 Query: 245 KSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 + + A L G A DG G A +GR A+ Sbjct: 245 TAPVGAIAEIVESLDDDGRIFDELSVRGCAAAIDGSDVIRTGAVGAPDKAEELGRAVARE 304 Query: 296 IRFISNKNVFNF 307 + + + + N Sbjct: 305 LLELGARELMNV 316 >gi|460692|dbj|BAA05861.1| porphobilinogen deaminase [Clostridium josui] Length = 295 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 93/295 (31%), Positives = 151/295 (51%), Gaps = 9/295 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIG+R S LA+ + S++ P + +I + T GD+I ++TL +I GKGL Sbjct: 6 KKIRIGSRDSKLAIIQSELIMSAIRKY--DPDIELELITMKTTGDKILDKTLDKIEGKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E++ L + E+D VHS KDMP + L + A RED RD FI Sbjct: 64 FVKELDNALYNNEVDITVHSYKDMPLEENPELPVVALSKREDPRDAFILPQNG-----EN 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 IG+SSLRR+ L RG ++TRL KL++ + AI+LA AGIKRL E Sbjct: 119 GEPIGSSSLRRQLQLKELFPGCKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLES 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I ++++ P+ QG I ++ V + + +K+ + E++ ER F+ E++G Sbjct: 179 RIGRYFSVDEILPAASQGIIAVQGRVG--ENFDFLKLFHSEESLCISLAERTFVREMNGG 236 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C + IA +A +GS + G+ + +GNR + + +G + + ++ Sbjct: 237 CSTPIAAYATIQGSEIILKGLYCNETTGELRKECVSGNRNNPVELGYELVKKMKS 291 >gi|117927446|ref|YP_871997.1| hydroxymethylbilane synthase [Acidothermus cellulolyticus 11B] gi|254800230|sp|A0LRF1|HEM3_ACIC1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|117647909|gb|ABK52011.1| hydroxymethylbilane synthase [Acidothermus cellulolyticus 11B] Length = 331 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 89/305 (29%), Positives = 140/305 (45%), Gaps = 8/305 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA A E +L + I+ + + GDR + L E G G+F Sbjct: 10 LRLGTRRSTLARAQTEEIAGALRAA----GCRVEIVGIQSTGDRHADVPLHEFAGSGVFV 65 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E+ L+ GE+D VHS KD+PT + L I+A R D RD ++ L +L + Sbjct: 66 AELRAALLRGEVDVVVHSMKDLPTAEIPELAIAAIPRRADPRDALVTGAGCRLAELPTGA 125 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GT S RR A L R D+ + RG ++TRL KL+ A+++A AG+ RL + + Sbjct: 126 IVGTGSPRRAAQLRLLRPDLEIRPIRGNLDTRLGKLHAGGYAALIVAAAGLARLHRSEEA 185 Query: 186 KEILNIEDFPPSPGQGAICIETH----VNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E + P+PGQGA+ +E + + ++ ++ T +V ERA LA + Sbjct: 186 AEFFDPTVMLPAPGQGALAVECRRADIADGGRLAGILAGLDDPATRAAVTAERALLAAVG 245 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C + + TL +V+ G S G DA ++GR A + Sbjct: 246 AGCSAPVGALGVVTADTLQLDAVVVDPSGTTAFRRSLTGTPDDASDLGRRLAADLIRAGA 305 Query: 302 KNVFN 306 + Sbjct: 306 DQLLQ 310 >gi|258651772|ref|YP_003200928.1| porphobilinogen deaminase [Nakamurella multipartita DSM 44233] gi|258554997|gb|ACV77939.1| porphobilinogen deaminase [Nakamurella multipartita DSM 44233] Length = 305 Score = 302 bits (774), Expect = 5e-80, Method: Composition-based stats. Identities = 93/307 (30%), Positives = 150/307 (48%), Gaps = 5/307 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + R+GTR S LALA + + + + ++ + T+GD T L IGG Sbjct: 1 MSSRVLRVGTRGSALALAQSGMIADRVARLAGA---TVELVRIRTEGDVNTG-PLATIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L+ G D VHS KD+PT +G+ ++A RE D + L D Sbjct: 57 TGVFVTGVREALLDGRADIVVHSYKDLPTAPTEGITVAAVPERESPFDALCARDGLRLDD 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S +GT S RR A LL R D++V+ RG ++TRL +++ A++LA AG+ RL Sbjct: 117 LPRGSTVGTGSPRRAAQLLARRPDLAVVPIRGNVDTRLRQVSEGHLDAVVLAAAGLNRLG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I ++L+ + P+P QGA+ +E + E + ++ T +V ER L + Sbjct: 177 RADAITDVLDADRMLPAPAQGALAVECRSGADTWFTEATRTLDDAPTRAAVVAERVLLRD 236 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+ C + + FA +G L +V+A DG V R G+ A ++G AA + Sbjct: 237 LEAGCSAPVGAFAQVQGDALTLRAVVVAVDGSSEFRVHRAGSPAAAADLGARAAADLIGQ 296 Query: 300 SNKNVFN 306 + Sbjct: 297 GAAGLLG 303 >gi|307187698|gb|EFN72670.1| Porphobilinogen deaminase [Camponotus floridanus] Length = 357 Score = 302 bits (774), Expect = 5e-80, Method: Composition-based stats. Identities = 102/281 (36%), Positives = 153/281 (54%), Gaps = 7/281 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++ R+G+R S LAL SL ++H P I+ ++TKGD+I +++L +IG K Sbjct: 6 KRDVIRVGSRKSELALIQTKHVIQSLKELH--PKKEFEIVTMNTKGDKILDKSLPKIGEK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 LFTEE+E L + ID VHS KDMPT L G+ + A L RED RD + K L Sbjct: 64 SLFTEELEIALENDRIDFVVHSLKDMPTTLPAGMALGAILKREDPRDAVVMSKKFKSKKL 123 Query: 122 ---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176 S+IGTSSLRR A L R + + + RG + TRL KL++ AI+LA AG+ Sbjct: 124 SSLPKGSIIGTSSLRRSAQLSRNMPHLKIQNIRGNLNTRLKKLDDENGSYAAIILAAAGL 183 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 KR+ E I ++L E+ + GQGA+ +E ++ + + L++ + +T CER+F Sbjct: 184 KRMGWEDRISQLLEPEEALYAIGQGALGVECRESDWEIRSLLEPLFDVETTLRCVCERSF 243 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277 L L G C + +A + K + L G V + DG+ + Sbjct: 244 LKTLGGGCSAPVAVSSCLKKNELTITGAVWSLDGQTLVTNT 284 >gi|241766973|ref|ZP_04764769.1| porphobilinogen deaminase [Acidovorax delafieldii 2AN] gi|241362537|gb|EER58429.1| porphobilinogen deaminase [Acidovorax delafieldii 2AN] Length = 244 Score = 302 bits (774), Expect = 5e-80, Method: Composition-based stats. Identities = 93/241 (38%), Positives = 140/241 (58%), Gaps = 4/241 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P I TR S LAL A ++ L H + ++ ++T+GD+I +R+L+++GGKGLF Sbjct: 8 PLVIATRESRLALWQAEHVQALLRAR----GHTVSLLGMTTQGDQILDRSLSKVGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G AVHS KD+P +L +G ++ + RED RD F+S SL+ L Sbjct: 64 VKELEVALEEGRAHIAVHSLKDVPMELPEGFALACVMEREDPRDAFVSPRYASLEALPQG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL ++ Sbjct: 124 AVVGTSSLRRQVLLQALRPDLRIEPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGLQER 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ P+ GQGA+ IE + E + + H++TW +V ERA + GSC Sbjct: 184 IRTEFATTAMLPAAGQGALGIEIRSDRQDLIEALAPLAHQETWLTVTAERAVSRAMGGSC 243 Query: 245 K 245 Sbjct: 244 S 244 >gi|317181546|dbj|BAJ59330.1| porphobilinogen deaminase [Helicobacter pylori F57] Length = 306 Score = 302 bits (774), Expect = 5e-80, Method: Composition-based stats. Identities = 99/304 (32%), Positives = 157/304 (51%), Gaps = 5/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K IG+R S LAL A + L I + TKGD+I + L +IGGKGL Sbjct: 2 KKLVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDAPLNKIGGKGL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L Sbjct: 59 FTKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE- 182 + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 119 GAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQG 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ ++E+ PS GQGA+ +E ++ ++ +N E++ + ERAF+ L+G Sbjct: 179 AKYRKAFSVEEMIPSMGQGALGVEMLKSHKHFAT-LQKLNDEESAFCCHLERAFVKGLNG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I A G + ++ +GK + G++ A+++ ++ + K Sbjct: 238 GCQIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKALDLVQELLEAFLQSGAK 297 Query: 303 NVFN 306 + Sbjct: 298 EILE 301 >gi|317012081|gb|ADU82689.1| porphobilinogen deaminase [Helicobacter pylori Lithuania75] Length = 306 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 97/303 (32%), Positives = 151/303 (49%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IG+R S LAL A + L I + TKGD+I + L +IGGKGLF Sbjct: 3 KLVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L Sbjct: 60 TKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183 + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 120 AKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ ++E+ PS GQGA+ +E N+ ++ +N + ER F+ L+G Sbjct: 180 KYRKAFSVEEMIPSMGQGALGVEMLKNHKHFAT-LQKLNDAKSAFCCRLEREFIKGLNGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I A G + ++ +GK + G++ A ++ ++ + K Sbjct: 239 CQIPIGVHASLVGDRVKIQAVLGLPNGKEVITKEKQGDKTKAFDLVQELLEEFLQSGAKE 298 Query: 304 VFN 306 + Sbjct: 299 ILE 301 >gi|301102795|ref|XP_002900484.1| porphobilinogen deaminase [Phytophthora infestans T30-4] gi|262101747|gb|EEY59799.1| porphobilinogen deaminase [Phytophthora infestans T30-4] Length = 361 Score = 302 bits (773), Expect = 6e-80, Method: Composition-based stats. Identities = 99/303 (32%), Positives = 154/303 (50%), Gaps = 12/303 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK- 61 K+ + +R S LA+A + L + + P V+ T GD++ +R L+++G Sbjct: 13 KRTIFVSSRKSQLAMAQTNTVIAMLEE--RFPDLQFVVGQEDTVGDQVLDRHLSDLGTTT 70 Query: 62 --GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---- 115 GLFT+ +E+ L++ AVHS KDMPT L GL ++A RE D + H Sbjct: 71 ASGLFTKSLEEALLAKAASFAVHSLKDMPTTLPDGLVLAAITKRESPEDAAVIHPKHKEK 130 Query: 116 --QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLA 172 ++L++L SVIGTSSLRR+ALL + RG I+TRL KL+ + AI++A Sbjct: 131 GIKTLQELPEGSVIGTSSLRREALLRSQFPTFEIKTVRGNIQTRLAKLDEHDDYDAIIVA 190 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 G +R + I EIL ++ F GQG+I +E ++ + E++K I E + Sbjct: 191 ACGFRRGELGDRIDEILPMDTFGYGVGQGSIGVECRADDEETIEMLKTITDEKSAQLCKA 250 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292 ER+ L L+G C+ A+ A TL VL+ DGK + +G R +G+ Sbjct: 251 ERSLLYHLEGGCQIAMGVSATLDEDTLTLNATVLSRDGKESVHETISGPRTQCEELGKQL 310 Query: 293 AQY 295 A+ Sbjct: 311 AER 313 >gi|307332259|ref|ZP_07611338.1| porphobilinogen deaminase [Streptomyces violaceusniger Tu 4113] gi|306882087|gb|EFN13194.1| porphobilinogen deaminase [Streptomyces violaceusniger Tu 4113] Length = 319 Score = 302 bits (773), Expect = 6e-80, Method: Composition-based stats. Identities = 97/304 (31%), Positives = 150/304 (49%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L + P ++P++T GDR L+++GGKG FT Sbjct: 15 IRIVSRSSPMALAQVERVRAELAALR--PGIRTEVVPVTTSGDRWMGD-LSKLGGKGAFT 71 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +AYL R+DIRD I +L ++ Sbjct: 72 KEVDAALLAGEADLAVHCIKDVPADRPLPAGTVFAAYLKRDDIRDAVIHPEGLTLDEMPA 131 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSS+RR A L ++ + RG RL KL + A++LA +G++R+ + Sbjct: 132 GTRIGTSSVRRVAQLAITHPELECVPMRGNANRRLEKLEAGECDALMLAVSGLERIGRTD 191 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I EIL ++ P G G + ++ ++ + E V + D W + ER L L G Sbjct: 192 RISEILPVDTMCPPIGAGVLGLQCREDDTETIEAVAGLGDADVWKEITAERMLLHVLQGH 251 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG+A + L V + DGK + D +G A + + Sbjct: 252 CNSPIAGYAKAERDGRLSLRARVFSPDGKRVLDAHEWAGPLDPATLGTSVAVALLRQGAR 311 Query: 303 NVFN 306 V + Sbjct: 312 EVID 315 >gi|25453441|sp|Q59293|HEM3_CLOJO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 291 Score = 302 bits (773), Expect = 6e-80, Method: Composition-based stats. Identities = 93/295 (31%), Positives = 151/295 (51%), Gaps = 9/295 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIG+R S LA+ + S++ P + +I + T GD+I ++TL +I GKGL Sbjct: 2 KKIRIGSRDSKLAIIQSELIMSAIRKY--DPDIELELITMKTTGDKILDKTLDKIEGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E++ L + E+D VHS KDMP + L + A RED RD FI Sbjct: 60 FVKELDNALYNNEVDITVHSYKDMPLEENPELPVVALSKREDPRDAFILPQNG-----EN 114 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 IG+SSLRR+ L RG ++TRL KL++ + AI+LA AGIKRL E Sbjct: 115 GEPIGSSSLRRQLQLKELFPGCKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLES 174 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I ++++ P+ QG I ++ V + + +K+ + E++ ER F+ E++G Sbjct: 175 RIGRYFSVDEILPAASQGIIAVQGRVG--ENFDFLKLFHSEESLCISLAERTFVREMNGG 232 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C + IA +A +GS + G+ + +GNR + + +G + + ++ Sbjct: 233 CSTPIAAYATIQGSEIILKGLYCNETTGELRKECVSGNRNNPVELGYELVKKMKS 287 >gi|226361138|ref|YP_002778916.1| porphobilinogen deaminase [Rhodococcus opacus B4] gi|226239623|dbj|BAH49971.1| porphobilinogen deaminase [Rhodococcus opacus B4] Length = 321 Score = 302 bits (773), Expect = 6e-80, Method: Composition-based stats. Identities = 92/314 (29%), Positives = 152/314 (48%), Gaps = 15/314 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIGTR S LA A R +L+ H+ ++ + TKGD+ + ++ +IG G Sbjct: 6 TRTLRIGTRGSELATTQAGTVRDALISA----GHDAELVIIKTKGDQ-SMESVEKIG-VG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT E+ + L G +D AVHS KD+PT + I+A PRED RD ++ L +L Sbjct: 60 VFTAELREALADGRVDVAVHSYKDLPTARDERFTIAAIPPREDPRDALVARDGLVLGELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S +GTS+ RR + L + ++ RG ++ RL K+ + + A++LA AG+ R+ + Sbjct: 120 PGSKVGTSAPRRTSQLRALGLGLDILPLRGNLQRRLGKVESGELDAVVLARAGLARIGRL 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +I E L P+P QGA+ +E N ++ ++ ++ +V ERA LAEL+ Sbjct: 180 DLITESLEPVQMLPAPAQGALAVECLSANTALVAILSELDDPNSRAAVTAERALLAELEA 239 Query: 243 SCKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 C + + A L G A DG G+ +A +GR A Sbjct: 240 GCTAPVGAIAEVVESLDDDGRIFDELSVRGCAAAIDGSDVIRTGAVGSPENAEELGRSVA 299 Query: 294 QYIRFISNKNVFNF 307 + + + + + N Sbjct: 300 RELLELGARELMNV 313 >gi|309810452|ref|ZP_07704278.1| hydroxymethylbilane synthase [Dermacoccus sp. Ellin185] gi|308435584|gb|EFP59390.1| hydroxymethylbilane synthase [Dermacoccus sp. Ellin185] Length = 327 Score = 302 bits (773), Expect = 6e-80, Method: Composition-based stats. Identities = 87/306 (28%), Positives = 142/306 (46%), Gaps = 10/306 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+ + L H + I+ ++T+GD +L ++GG G+F Sbjct: 10 PIRLGTRRSHLAMTQSTWVAEQLRAH----GHAVEIVEITTEGDVNR-ASLAQMGGTGVF 64 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 I + L+ E+D AVHS KD+P GL I+ RED RD ++ +L +L Sbjct: 65 AAAIRRALLEDEVDMAVHSLKDLPVAPEPGLVIAGIPVREDPRDALVARDGLTLGELPAG 124 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GT S RR A L + D RG I+TR+ + + + ++LA AG+ R+++ Sbjct: 125 AVVGTGSPRRAAQLQALGLGFEIRDIRGNIDTRMGYVTSGELDGVILARAGLARVERTGA 184 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E ++ P+PGQGA+ +E + + + ++ DT +V ERA L L+ C Sbjct: 185 ISETIDPLQMLPAPGQGALGLECREGDARVIAALAELDDADTRAAVTAERAVLGALEAGC 244 Query: 245 KSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + + A + V A DG S G+ + +G A+ + Sbjct: 245 AAPVGALAEIVEEPDGSLEISLRAFVGAPDGSFELRRSDVGSYDNPAAVGEALARTLLDD 304 Query: 300 SNKNVF 305 V Sbjct: 305 GAGAVI 310 >gi|150016167|ref|YP_001308421.1| porphobilinogen deaminase [Clostridium beijerinckii NCIMB 8052] gi|254800241|sp|A6LSY5|HEM3_CLOB8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|149902632|gb|ABR33465.1| porphobilinogen deaminase [Clostridium beijerinckii NCIMB 8052] Length = 291 Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats. Identities = 109/300 (36%), Positives = 160/300 (53%), Gaps = 10/300 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I TR S LA SL D I ++I+ T+GDR + +L +IGG Sbjct: 1 MNK--LTIATRKSKLAQTQTEIIMKSLKDKFNIDSEKMLIV---TEGDRKLDVSLAKIGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF ++IE L+ D AVHS KD+P +L +I+A REDIRDV IS K+ Sbjct: 56 KGLFVKDIEIALLEKRADGAVHSMKDVPYELSHEFEIAAITEREDIRDVLISKDNIPFKE 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++IGTSS+RR L R+D+ ++ RG ++TRL K+ I+LA AG+KRL Sbjct: 116 LRKGAIIGTSSIRRACQLKLMRNDLDIVPIRGNVQTRLEKMKEQNLDGIILASAGLKRLN 175 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +E +I E + + F P+ QGA+ IE + A++ + + + +V ER+F+ L Sbjct: 176 EEDIITEYFDPKVFIPAVAQGALGIEC-LKTSSAKKYFEKMEDSNAKLTVEAERSFMRML 234 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASD-GKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C S I ++ +G+ LY GI D G + G++ D I +GR A I I Sbjct: 235 NGDCHSLIGAYSEIQGNDLYMIGIY---DIGGRIVKKDILGDKNDHIELGRKLANKILEI 291 >gi|29831283|ref|NP_825917.1| porphobilinogen deaminase [Streptomyces avermitilis MA-4680] gi|39931482|sp|Q82E76|HEM31_STRAW RecName: Full=Porphobilinogen deaminase 1; Short=PBG 1; AltName: Full=Hydroxymethylbilane synthase 1; Short=HMBS 1; AltName: Full=Pre-uroporphyrinogen synthase 1 gi|29608398|dbj|BAC72452.1| putative porphobilinogen deaminase [Streptomyces avermitilis MA-4680] Length = 324 Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats. Identities = 86/322 (26%), Positives = 153/322 (47%), Gaps = 22/322 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ R+GTR S LA+A + + ++ V P + ++ ++T GD + L +IGG Sbjct: 1 MSEQALRLGTRRSKLAMAQSGQVADAVRQVTGRP---VELVEITTYGDT-SREHLAQIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + L+ GE+D AVHS KD+PT L ++A RED RDV ++ + ++ Sbjct: 57 TGVFVTALRDALLRGEVDFAVHSLKDLPTAQPDELALAAVPVREDPRDVLVARDGLTFEE 116 Query: 121 L----ALH-SVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILL 171 L + +GT S RR A L + + RG +++R+ + + + ++L Sbjct: 117 LGAPSPKGTARVGTGSPRRMAQLNAYARSHGLAVETVPIRGNVDSRIGYVRSGELDGVVL 176 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ R+ + + E L ++ P+PGQGA+ IE +N + ++ T +V Sbjct: 177 AAAGLHRIGRIDEVTEFLPVDTVLPAPGQGALAIECAADNADLIAALAELDDPFTRAAVT 236 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---- 282 ER+ LA L+ C + + A + G+V +DG ++S G Sbjct: 237 AERSLLAALEAGCSAPVGALADLLADGQIVTEMRLRGVVGTTDGSTLVQLSTTGPVPETH 296 Query: 283 CDAINIGRDAAQYIRFISNKNV 304 A+ +GR+ A + + Sbjct: 297 DQAMALGRELAAEMLAKGAAGL 318 >gi|86131003|ref|ZP_01049602.1| Porphobilinogen deaminase [Dokdonia donghaensis MED134] gi|85818414|gb|EAQ39574.1| Porphobilinogen deaminase [Dokdonia donghaensis MED134] Length = 304 Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats. Identities = 93/304 (30%), Positives = 146/304 (48%), Gaps = 10/304 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A + L D + ++P+ + GD I ++ L E+G Sbjct: 1 MS-KTIRIGTRDSELALWQAKTVQKQLEDH----GYTTELVPVKSTGDLILDKPLYELGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ +++G +D AVHS KD+PT L G+ +A LPR + D+ + A D Sbjct: 56 TGIFTKTLDVAMLNGTVDIAVHSMKDVPTALPIGIVQAAVLPRAETEDILVHKGA---PD 112 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 I T SLRR+A L + D RG + TRL KL + + A AG+KR+ Sbjct: 113 YKQACTIATGSLRRQAQWLNRYPNHKTTDIRGNVNTRLQKLEESDWTGAIFAKAGLKRIN 172 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+L + P+P QGA+ + + ++E +N T + ER FL L Sbjct: 173 VLPENYEVL--DWMIPAPAQGAMLVVAMEEDAFSKEACAKLNDRTTALCTHIEREFLRTL 230 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C + I A + F G++ + DG EV + + +A+ G D A + Sbjct: 231 EGGCTAPIGALAQEIDGAIRFKGVLFSLDGATKIEVEQVVSTENALGFGTDCALEVLDNG 290 Query: 301 NKNV 304 + + Sbjct: 291 GRAL 294 >gi|163848145|ref|YP_001636189.1| porphobilinogen deaminase [Chloroflexus aurantiacus J-10-fl] gi|222526046|ref|YP_002570517.1| porphobilinogen deaminase [Chloroflexus sp. Y-400-fl] gi|163669434|gb|ABY35800.1| porphobilinogen deaminase [Chloroflexus aurantiacus J-10-fl] gi|222449925|gb|ACM54191.1| porphobilinogen deaminase [Chloroflexus sp. Y-400-fl] Length = 324 Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats. Identities = 93/312 (29%), Positives = 150/312 (48%), Gaps = 14/312 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LA + +L P + + +ST GDR+ + L+ +G KGLF Sbjct: 4 LLLGTRGSALARVQSVWVADALRTA--FPSLEVELRIISTTGDRVLDVALSAVGDKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDLA 122 +E+E L++ E+D VHSAKDMPT GL ++A+ R D RDV + L L Sbjct: 62 KELEHALLASEVDLCVHSAKDMPTATPDGLVLAAFPVRVDPRDVLVVRQAGLGTDLATLP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 + +GTSSLRR + + R D+ + D RG ++TRL KL + + A++LA AG++RL Sbjct: 122 AGARVGTSSLRRTSQVRHHRPDLQLTDVRGNVDTRLRKLASGQYDALILAAAGLRRLGLW 181 Query: 182 --------EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 + + L P+ QG + IET ++ + LV+ ++ + E Sbjct: 182 DGTPGAQIGEAVVYPLEPSVMLPAVAQGILAIETRADDEATRTLVESLDDPAARAAALAE 241 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 RA L L+G C+ +A A + ++ G+V DG + G+ A +G A Sbjct: 242 RALLRRLEGGCQIPVAAHAVMTDTGMHLRGMVGTLDGSTLVFAEQTGDPAQAEALGVAVA 301 Query: 294 QYIRFISNKNVF 305 + + + Sbjct: 302 EELLARGGDAIL 313 >gi|308061591|gb|ADO03479.1| porphobilinogen deaminase [Helicobacter pylori Cuz20] Length = 306 Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats. Identities = 97/302 (32%), Positives = 155/302 (51%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKEC---SIESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E ++ ++ +N E++ + ER F+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKSHKHFAT-LQKLNDEESAFCCHLEREFIKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A+++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIRAVLGLPNGKEVIAKEKQGDKTKALDLVQELLEAFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|238499723|ref|XP_002381096.1| hydroxymethylbilane synthase, putative [Aspergillus flavus NRRL3357] gi|220692849|gb|EED49195.1| hydroxymethylbilane synthase, putative [Aspergillus flavus NRRL3357] Length = 337 Score = 301 bits (772), Expect = 8e-80, Method: Composition-based stats. Identities = 105/310 (33%), Positives = 153/310 (49%), Gaps = 17/310 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K F +GTR S LAL+ S+L V+ P + I T GD T E K Sbjct: 16 SRKTFTVGTRKSKLALSQTDLVVSALKKVY--PNYEFKIHSQETAGDLNTTIAFREFTTK 73 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118 L+TEE+E+ L++G +D VHS KD+PT L + + RED RDV + SL Sbjct: 74 NLWTEELEEHLMAGNVDFIVHSLKDVPTTLPPACTLGPMMEREDSRDVLVIKQGLPNMSL 133 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGI 176 DL SV+GTSS+RR A L + VID RG I TRL KL+ I+LA AG+ Sbjct: 134 SDLPAGSVVGTSSIRRTAQLALKYPHLKVIDVRGNIGTRLAKLDAEDSPYTCIILAAAGL 193 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 RL + I + L+ ++ + GQGA+ IE ++ ++++ I H +T + ER Sbjct: 194 LRLGLDDRISQYLDSKNGGMLYAVGQGALGIEIRKDDQVMRDMLNNIGHNETTFASTAER 253 Query: 235 AFLAELDGSCKSAIAGFAYC----KGS-TLYFYGIVLASDGKIFHEVSRNG---NRCDAI 286 + L L+G C + + GS L IV++ DGK EV +G + A Sbjct: 254 SLLRTLEGGCSAPLGVETEWIKSSDGSKKLRMRSIVVSVDGKESAEVEIDGSVDSVEAAE 313 Query: 287 NIGRDAAQYI 296 + G A+ + Sbjct: 314 DFGVTVAKEL 323 >gi|207092595|ref|ZP_03240382.1| porphobilinogen deaminase [Helicobacter pylori HPKX_438_AG0C1] Length = 306 Score = 301 bits (772), Expect = 8e-80, Method: Composition-based stats. Identities = 98/302 (32%), Positives = 152/302 (50%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECF---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E N+ ++ +N E + ER F+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKNHKHFIT-LQKLNDEKSAFCCRLEREFIKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A ++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEAIAKEKQGDKTKAFDLVQELLEEFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|315586235|gb|ADU40616.1| hydroxymethylbilane synthase [Helicobacter pylori 35A] Length = 306 Score = 301 bits (772), Expect = 8e-80, Method: Composition-based stats. Identities = 99/302 (32%), Positives = 155/302 (51%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECF---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E N+ ++ +N E++ + ER F+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKNHKHFAT-LQKLNDEESAFCCHLEREFIKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK R G++ A+++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKERQGDKTKALDLVQELLEAFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|297156263|gb|ADI05975.1| porphobilinogen deaminase [Streptomyces bingchenggensis BCW-1] Length = 315 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 98/304 (32%), Positives = 147/304 (48%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L + P ++P++T GDR L+ +GGKG FT Sbjct: 11 IRIVSRSSPMALAQVERVRAELAALR--PGIRTEVVPVTTSGDRWMGD-LSALGGKGAFT 67 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +AYL R+DIRD + +L L Sbjct: 68 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTVFAAYLKRDDIRDAVVHPGGLTLDQLPE 127 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSS+RR A L + + RG RL KL+ + A+LLA +G++R+ + Sbjct: 128 GARIGTSSVRRIAQLAVSHPHLECVPMRGNANRRLEKLDAGECDALLLAVSGLERIGRTD 187 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I EIL +E P G G + ++ ++ + V + D W + ER L L G Sbjct: 188 RISEILPVETMCPPIGAGVLALQCREDDTATIDAVSGLGDADAWKEITAERMLLHVLQGH 247 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG+A + L V + DGK + D +G A + + Sbjct: 248 CNSPIAGYARAERDGRLSLRARVFSPDGKTVLDAHEWAGPLDPATLGTSVAVALLRQGAR 307 Query: 303 NVFN 306 V + Sbjct: 308 EVID 311 >gi|110800724|ref|YP_696126.1| porphobilinogen deaminase [Clostridium perfringens ATCC 13124] gi|169347253|ref|ZP_02866192.1| porphobilinogen deaminase [Clostridium perfringens C str. JGS1495] gi|123344731|sp|Q0TQG4|HEM3_CLOP1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|4239996|dbj|BAA74781.1| hydroxymethylbilane synthase [Clostridium perfringens] gi|110675371|gb|ABG84358.1| porphobilinogen deaminase [Clostridium perfringens ATCC 13124] gi|169296649|gb|EDS78780.1| porphobilinogen deaminase [Clostridium perfringens C str. JGS1495] Length = 291 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 99/292 (33%), Positives = 157/292 (53%), Gaps = 6/292 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LA + L + + ++++ T+GDR + +L +IGGKGLF Sbjct: 3 LIIATRKSKLAQVQTEKVMELLKEKENVDSKKLLVM---TEGDRRLDVSLNKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L + Sbjct: 60 KEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI Sbjct: 120 RIGTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + + F P+ GQGA+ IE + + K ++ ++ +V ER+F+ L+G C Sbjct: 180 SDYFDPKVFLPAIGQGALGIECLKGG-EFNDYFKALDSKEVRTTVEAERSFMKVLNGGCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 S I ++ K + LY G + +I + GN+ D I +G+ A+ I Sbjct: 239 SLIGAYSEVKDNDLYMIGT-FTVNNRIVKKD-ILGNKEDNILLGKKLAEKIL 288 >gi|332673079|gb|AEE69896.1| hydroxymethylbilane synthase [Helicobacter pylori 83] Length = 306 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 96/302 (31%), Positives = 154/302 (50%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKEC---SIESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA G+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEVGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E ++ ++ +N E++ + ER F+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKSHKHFAT-LQKLNDEESAFCCHLEREFVKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A+++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIRAVLGLPNGKEVIAKEKQGDKTKALDLVQELLEAFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|326329564|ref|ZP_08195886.1| hydroxymethylbilane synthase [Nocardioidaceae bacterium Broad-1] gi|325952560|gb|EGD44578.1| hydroxymethylbilane synthase [Nocardioidaceae bacterium Broad-1] Length = 336 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 92/311 (29%), Positives = 157/311 (50%), Gaps = 12/311 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGGK 61 + R+GTR S LA+ + L H + ++ + + GDR N LT Sbjct: 2 RTLRLGTRRSQLAVTQSTLVAEMLRAQ----GHIVELVEIVSDGDRTQASNTPLTSANST 57 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F + L + EID AVHS KD+PT +G+++ A LPRED RDV ++ +L +L Sbjct: 58 GVFVSALRDALHAKEIDLAVHSLKDLPTYPEEGIELVAILPREDPRDVIVARDGLTLGEL 117 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 S +GT S RR A + + + RG ++TR+ K+ + + A++LA AG+ R+ + Sbjct: 118 PPGSRVGTGSPRRVAQIKALGLGLELAGIRGNVDTRIGKVRSGEFDAVVLARAGLARIDR 177 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVN--NPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E+L+ P+PGQGA+ +E + ++++ ++ T +V ERA LA Sbjct: 178 LDEVTEVLDPIQVLPAPGQGALAVECREGDADADVRKILTSLDDAPTRAAVEAERAVLAT 237 Query: 240 LDGSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 L+G C + I A +G L+ + L+ DG + +S +G DA +GR A+ Sbjct: 238 LEGGCAAPIGTLADVVEGEEGPELWVRAVALSLDGSLSVRLSASGPLDDAAGVGRRLAEE 297 Query: 296 IRFISNKNVFN 306 + ++ + Sbjct: 298 MLAEGAADLTD 308 >gi|158287571|ref|XP_564464.3| AGAP011080-PA [Anopheles gambiae str. PEST] gi|157019715|gb|EAL41625.3| AGAP011080-PA [Anopheles gambiae str. PEST] Length = 599 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 148/290 (51%), Gaps = 17/290 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K R+G+R S LAL S L ++ P I ++T GDR+ N++L +IG K Sbjct: 10 ATKTIRVGSRKSELALTQTKHVISLLQKLN--PDVVYEIHTMTTVGDRVLNKSLPKIGEK 67 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118 LFT+++E L +G +D VHS KD+PT L G+ I A L RED RD + H +L Sbjct: 68 SLFTKDLEDALRTGGVDFVVHSLKDLPTSLPLGMAIGAVLEREDPRDALVLNERHRGCTL 127 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176 L S++GTSSLRR A L R+ S ++V D RG + TRL KL+ K I+LA AG+ Sbjct: 128 ATLPRGSIVGTSSLRRSAQLARYYSHLAVCDIRGNLNTRLAKLDAEASKFAGIILAQAGL 187 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ K I +I+ + + GQGA+ +E N+ ++ + H +T + ER+F Sbjct: 188 VRMGWNKRIDQIIEPHEILYAVGQGALAVECRSNDEYILGMLGKLCHLETQCRILTERSF 247 Query: 237 LAELDGSCKSAIAGFAYC----------KGSTLYFYGIVLASDGKIFHEV 276 L L G C + +A GS L G V + DGK Sbjct: 248 LKTLGGGCSAPVAVRTDLKRRWRADDAEDGSPLVVEGAVWSLDGKTEIRT 297 >gi|182626954|ref|ZP_02954686.1| porphobilinogen deaminase [Clostridium perfringens D str. JGS1721] gi|177907690|gb|EDT70308.1| porphobilinogen deaminase [Clostridium perfringens D str. JGS1721] Length = 291 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 99/293 (33%), Positives = 158/293 (53%), Gaps = 6/293 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LA + L + + ++++ T+GDR + +L +IGGKGLF Sbjct: 3 LIIATRKSKLAQVQTEKVMELLKEKENVDSKKLLVM---TEGDRRLDVSLNKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L + Sbjct: 60 KEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI Sbjct: 120 RIGTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + + F P+ GQGA+ IE + + K ++ ++ +V+ ER+F+ L+G C Sbjct: 180 SDYFDPKVFLPAIGQGALGIECLKGG-EFNDYFKALDSKEVRTTVDAERSFMKVLNGGCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 S I ++ K + LY G + +I + GN+ D I +G+ A+ I Sbjct: 239 SLIGAYSEVKDNDLYMIGT-FTVNNRIVKKD-ILGNKEDNILLGKKLAEKILE 289 >gi|125717350|ref|YP_001034483.1| porphobilinogen deaminase [Streptococcus sanguinis SK36] gi|254800260|sp|A3CL78|HEM3_STRSV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|125497267|gb|ABN43933.1| Porphobilinogen deaminase, putative [Streptococcus sanguinis SK36] Length = 306 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 110/302 (36%), Positives = 160/302 (52%), Gaps = 9/302 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG+ Sbjct: 2 KVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKGV 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLA 122 F +EIE+ L++GEI+ AVHS KDMP KL +G + A RED+RD I Q+L DL Sbjct: 60 FVKEIERALLAGEINMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S+IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 120 KGSLIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGWL 179 Query: 183 KVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + L P+ QGA+ +E + + L+ + E T V ERA LA+ Sbjct: 180 DQSRLHIQPLETSLCLPAISQGALAVECREEDEELLSLLAAVQDEKTAAEVAVERAVLAQ 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ C IA FA G ++ DG+ VS G D + A + + Sbjct: 240 MNADCTFPIAAFAQKNGQGYQLEAMLAKEDGQCIF-VSLQG--QDGQQLAEQAVRQLADK 296 Query: 300 SN 301 Sbjct: 297 GA 298 >gi|118472022|ref|YP_885356.1| porphobilinogen deaminase [Mycobacterium smegmatis str. MC2 155] gi|118173309|gb|ABK74205.1| porphobilinogen deaminase [Mycobacterium smegmatis str. MC2 155] Length = 318 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 91/310 (29%), Positives = 142/310 (45%), Gaps = 15/310 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA A R +L+ H ++ +ST+GDR + +IG G+FT Sbjct: 9 IRLGTRGSLLATTQAGTVRDALLAA----GHPCELVIISTEGDRNQG-PIADIG-IGVFT 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + G +D AVHS KD+PT + I A RED RD ++ L +L S Sbjct: 63 AALREAIHDGRVDMAVHSYKDLPTASDERFCIPAIPRREDPRDALVARDGLVLGELPTGS 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS RR A L + + RG ++TRLN++ + + I++A AG+ R+ + V+ Sbjct: 123 VIGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVTSGELDGIVVARAGLARIGRLNVV 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ +E + + ++ ++ DT +V ER LAEL+ C Sbjct: 183 TETLEPVQMLPAPAQGALAVECRAGDTELIAILSELDDADTRAAVTAERVLLAELEAGCS 242 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G DG S G A +G A + Sbjct: 243 APVGAIAEVVESIDEDGNVFEELSLRGCAATLDGSDVIRASGIGTPDRAAELGVSVAAEL 302 Query: 297 RFISNKNVFN 306 + + + Sbjct: 303 FDLGARELLE 312 >gi|168206340|ref|ZP_02632345.1| porphobilinogen deaminase [Clostridium perfringens E str. JGS1987] gi|170662220|gb|EDT14903.1| porphobilinogen deaminase [Clostridium perfringens E str. JGS1987] Length = 291 Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats. Identities = 99/292 (33%), Positives = 157/292 (53%), Gaps = 6/292 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LA + L + + ++++ T+GDR + +L +IGGKGLF Sbjct: 3 LIIATRKSKLAQVQTEKVMELLKEKENVDSKKLLVM---TEGDRRLDVSLNKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L + Sbjct: 60 KEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI Sbjct: 120 RIGTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + + F P+ GQGA+ IE + + K ++ ++ +V ER+F+ L+G C Sbjct: 180 SDYFDPKVFLPAIGQGALGIECLKGG-EFNKYFKALDSKEVRTTVEAERSFMKVLNGGCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 S I ++ K + LY G + +I + GN+ D I +G+ A+ I Sbjct: 239 SLIGAYSEVKDNDLYMIGT-FTVNNRIVKKD-ILGNKEDNILLGKKLAEKIL 288 >gi|111019045|ref|YP_702017.1| porphobilinogen deaminase [Rhodococcus jostii RHA1] gi|110818575|gb|ABG93859.1| hydroxymethylbilane synthase [Rhodococcus jostii RHA1] Length = 321 Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats. Identities = 91/314 (28%), Positives = 151/314 (48%), Gaps = 15/314 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIGTR S LA A R +L+ H+ ++ + TKGD+ + ++ +IG G Sbjct: 6 TRTLRIGTRGSELATTQAGTVRDALISA----GHDAELVIIKTKGDQ-SMESVEKIG-VG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT E+ + L G +D AVHS KD+PT + I+A PRED RD ++ L +L Sbjct: 60 VFTAELREALADGRVDVAVHSYKDLPTAPDERFTIAAIPPREDPRDALVARDGLVLGELP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S +GTS+ RR + L + + RG ++ RL K+ + + A++LA AG+ R+ + Sbjct: 120 AGSKVGTSAPRRTSQLRALGLGLDIRPLRGNLQRRLGKVESGELDAVVLARAGLARIGRL 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +I E + P+P QGA+ +E N ++ ++ ++ +V ERA LAEL+ Sbjct: 180 DLITESIEPVQMLPAPAQGALAVECLSANTALVAILSELDDPNSRAAVTAERALLAELEA 239 Query: 243 SCKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 C + + A L G A DG G+ +A +GR A Sbjct: 240 GCTAPVGAIAEVVESLDDDGRIFDELSVRGCAAAIDGSDVIRTGAVGSPENAEELGRSVA 299 Query: 294 QYIRFISNKNVFNF 307 + + + + + N Sbjct: 300 RELLELGARELMNV 313 >gi|94498044|ref|ZP_01304607.1| porphobilinogen deaminase [Sphingomonas sp. SKA58] gi|94422479|gb|EAT07517.1| porphobilinogen deaminase [Sphingomonas sp. SKA58] Length = 313 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 117/292 (40%), Positives = 160/292 (54%), Gaps = 6/292 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P R+GTR SPLALA A T +L+ H I I+ + T GDRI +R L +IGGK L Sbjct: 11 RPLRLGTRGSPLALAQARLTAQALIAAHGWSADAIEIVTVQTSGDRIQDRALADIGGKAL 70 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +T+E+++ L++GE D +VHS KD+ T I+A LPR D RD I A S L Sbjct: 71 WTKELDRALVAGETDLSVHSMKDVETVRHDIFHIAAMLPRADPRDKLIG--AASFDALPP 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + ++GTSS RR A + R R D ++ FRG + TRL KL + HA LLA AG+ RL + Sbjct: 129 NPIVGTSSPRRGAQVKRLRPDATITLFRGNVATRLAKLAAGEVHATLLAAAGLDRLDQGN 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V I+ ++ P+P QGA+ IE N E V INH DT+D+V ERA L L G+ Sbjct: 189 VGT-IIPVDTMLPAPSQGAVGIEILAGNAPVIEAVAAINHRDTFDTVMMERAVLRGLGGT 247 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS---RNGNRCDAINIGRDA 292 C S IA A G L +++ DG+ + G+ +GR Sbjct: 248 CHSPIAALALVDGDDLMLRAEIISPDGQETVSENLRLARGDLDAGEALGRAL 299 >gi|157964647|ref|YP_001499471.1| porphobilinogen deaminase [Rickettsia massiliae MTU5] gi|189028151|sp|A8F1Y8|HEM3_RICM5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157844423|gb|ABV84924.1| Porphobilinogen deaminase [Rickettsia massiliae MTU5] Length = 351 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 98/250 (39%), Positives = 148/250 (59%), Gaps = 3/250 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLAL H + P N I+P+ T GD I N+ L +IGGK LF Sbjct: 5 IRIGTRKSPLALIHTNLVIQQIKQF--FPDINCKIVPIITSGDLIQNKPLYDIGGKALFL 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++L ++ Sbjct: 63 KEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+ Sbjct: 123 VIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLEAFNPE 182 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ P GQG I +E ++ ++ INH T++ + ERAFL LD +C Sbjct: 183 YCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLKICNQINHLPTFELIKPERAFLEYLDANC 242 Query: 245 KSAIAGFAYC 254 ++ IA ++ Sbjct: 243 RTPIAAYSQY 252 >gi|302553238|ref|ZP_07305580.1| porphobilinogen deaminase [Streptomyces viridochromogenes DSM 40736] gi|302470856|gb|EFL33949.1| porphobilinogen deaminase [Streptomyces viridochromogenes DSM 40736] Length = 330 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 92/316 (29%), Positives = 154/316 (48%), Gaps = 17/316 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+ R+GTR S LA+A + + ++ V P + ++ ++T GD ++ L +IGG Sbjct: 13 EQGALRLGTRRSKLAMAQSGQVAEAVRRVTGRP---VELVEITTYGD-VSREQLAQIGGT 68 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F + L+ GE+D AVHS KD+PT L ++A RED RDV ++ A DL Sbjct: 69 GVFVTALRDALLKGEVDFAVHSLKDLPTTQPDELVVAAVPVREDPRDVIVARDALKFTDL 128 Query: 122 ALHSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 + IGT S RR A L + DIS + RG ++TR+ + + + A++LA AG+ Sbjct: 129 PSGARIGTGSPRRMAQLNAYARSHSLDISTVPIRGNVDTRIGYVRSGELDAVVLAAAGLN 188 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + + + L+++ P+PGQGA+ IE N + ++ T +V ER+ L Sbjct: 189 RIGRGDEVTDFLSVDTVLPAPGQGALAIECAAGNADLVAALAELDDPFTRVAVTAERSLL 248 Query: 238 AELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAINI 288 A L+ C + + A + +V +DG ++S G A + Sbjct: 249 AALEAGCSAPVGALADLLADGQIVKEMRLRAVVGTTDGTRTVQLSTTGPVPQTHDRATAL 308 Query: 289 GRDAAQYIRFISNKNV 304 GR+ A + + Sbjct: 309 GRELAAEMLAQGAAGL 324 >gi|95931480|ref|ZP_01314180.1| porphobilinogen deaminase [Desulfuromonas acetoxidans DSM 684] gi|95132465|gb|EAT14164.1| porphobilinogen deaminase [Desulfuromonas acetoxidans DSM 684] Length = 313 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 112/309 (36%), Positives = 174/309 (56%), Gaps = 9/309 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +IGTR S LAL A+ L D + I+ + T+GD++ + ++ +IG Sbjct: 1 MSTK-IKIGTRRSKLALWQAYYVEQLLQDA----GMDTEIVEIDTRGDQVLDVSIAKIGS 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLK 119 KG+FTEE+E +L SG+ID AVHSAKDM ++L +G +I A+ RE + DV +S L Sbjct: 56 KGVFTEELEDQLRSGDIDIAVHSAKDMQSELPEGFEIIAFTIREKVNDVVVSRDKSIRLG 115 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 D + IG+SS+RR+A+L + +++I+ RG ++TR+ K+++ + AILLAYAG+ R+ Sbjct: 116 DTSRPLTIGSSSVRRRAILKAYYPHLNIIEMRGNLQTRIGKMDDGQCDAILLAYAGVNRM 175 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQE-LVKVINHEDTWDSVNCERAFL 237 + +I E L +E F P GQG++ IE+ +N + K +E + K +NH DT + ERAFL Sbjct: 176 EYNDLIVETLPLEQFIPPVGQGSVAIESAINLDAKKRETIRKAVNHPDTEFRLLAERAFL 235 Query: 238 AELDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L G C A +G L G +++ DG+ + G R DA +G A Sbjct: 236 KTLKGGCSIPAFCMAELEGDDQLKVTGGMISLDGQTLIKNVLTGARSDAEQLGDQMANLT 295 Query: 297 RFISNKNVF 305 + Sbjct: 296 LEQGGAQIL 304 >gi|332981813|ref|YP_004463254.1| porphobilinogen deaminase [Mahella australiensis 50-1 BON] gi|332699491|gb|AEE96432.1| porphobilinogen deaminase [Mahella australiensis 50-1 BON] Length = 292 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 104/292 (35%), Positives = 154/292 (52%), Gaps = 4/292 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+G+R S LALA S+L ++ P + + T+GDR+ + + IG KG+F Sbjct: 3 KIRVGSRGSRLALAQTDAVISALRSLY--PDIDFERQIVKTEGDRLQHIPVERIGDKGIF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 ++IE+ L+ G ID AVHS KD+P++L GL I A RED RD FIS ++++ L Sbjct: 61 VKDIEQALMDGHIDMAVHSMKDVPSQLPDGLMIGAMPWREDPRDAFISSDGRTIEQLGCR 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IG S RR A L I ++ RG I+TR+NK+N I+LA AG+KRL V Sbjct: 121 ARIGIGSARRSAQLKNCFPGIDIVAIRGNIDTRINKINEAGLDGIVLAVAGLKRLGVSDV 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I +IL ++ P+ GQGA+ IE ++ KA +L+ +NH T +V+ ER F+A + G C Sbjct: 181 ITQILPVDVCTPAAGQGALGIEIRKSDEKAADLLMPLNHAPTRAAVDAERMFMAMMGGDC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + I + G + V DG I S G N+ + Sbjct: 241 NTPIGVYGEVDGVDILLRAAV-EKDGCIM-RHSVKGEVAQYQNVVSKLVALL 290 >gi|229490699|ref|ZP_04384537.1| porphobilinogen deaminase [Rhodococcus erythropolis SK121] gi|229322519|gb|EEN88302.1| porphobilinogen deaminase [Rhodococcus erythropolis SK121] Length = 324 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 92/312 (29%), Positives = 145/312 (46%), Gaps = 15/312 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA A R +L+ H ++ + TKGD+ T+ + +IG G+F Sbjct: 11 PLRIGTRGSLLATTQAGTVRDALIAA----GHPAELVIIKTKGDQSTD-PVQKIG-VGVF 64 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T E+ + L+ +D AVHS KD+PT I+A PRED RD ++ L +L Sbjct: 65 TAELREALVDNRVDVAVHSYKDLPTAQDPRFVIAAIPPREDPRDALVARDGLVLGELPAG 124 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S +GTS+ RR + L + ++ RG ++ RL K+ + + A++LA AG+ R+ + Sbjct: 125 SKVGTSAPRRVSQLKALGLGLDIVPLRGNLQRRLGKVESGELDAVILARAGLSRIGLLDL 184 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E + P+P QGA+ +E N + ++ + T +V ERA LA L+ C Sbjct: 185 ITENIEPVQMLPAPAQGALAVECLSANAELAAILAEHDDAGTRAAVTAERALLAGLEAGC 244 Query: 245 KSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 + + A L G A DG G A +GR A+ Sbjct: 245 TAPVGAIAEIVESLDDDGRIFDELSVRGCAAAIDGSDVIRTGAVGAPDKAEELGRAVARE 304 Query: 296 IRFISNKNVFNF 307 + + + + N Sbjct: 305 LLELGARELMNV 316 >gi|255280051|ref|ZP_05344606.1| hydroxymethylbilane synthase [Bryantella formatexigens DSM 14469] gi|255269142|gb|EET62347.1| hydroxymethylbilane synthase [Bryantella formatexigens DSM 14469] Length = 309 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 93/294 (31%), Positives = 151/294 (51%), Gaps = 6/294 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ IG+R S LA+ + + ++ + P + I+ + T GD+I +RTL ++GGKG Sbjct: 2 KRTIIIGSRESRLAVIQSEIVKQAIEQ--ENPQLAVSILTMKTTGDKILDRTLDKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+++ L+ D +VHS KD+P ++ K L + A+ RED+RDV + D Sbjct: 60 LFVKELDRALLEKRSDLSVHSLKDVPMEVPKELPLLAFSAREDVRDVLVLPEGAVEPDF- 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 G S RR + ++ RG + TRL KL+ + A++LA AG+KRL E Sbjct: 119 -SKPFGCSGRRRALQIKELYPHVTCHPVRGNVLTRLRKLDEGEYGALILAAAGLKRLGLE 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + E+ P+ GQG + ++ +K + ++ D+ CERAF+ LDG Sbjct: 178 GRISRYFSTEEMVPAAGQGILAVQGRCGED--HSYLKAFSDDEARDAALCERAFVRALDG 235 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C S +A +A +GS + G+ D + G R DA IG + A+Y+ Sbjct: 236 GCSSPVAAYARTEGSRILLTGLYYEEDTGRWCRGCLGGARTDAERIGAELAEYL 289 >gi|308182412|ref|YP_003926539.1| porphobilinogen deaminase [Helicobacter pylori PeCan4] gi|308064597|gb|ADO06489.1| porphobilinogen deaminase [Helicobacter pylori PeCan4] Length = 306 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 100/307 (32%), Positives = 157/307 (51%), Gaps = 7/307 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK IG+R S LAL A + L I + T GD+I + L +IGG Sbjct: 1 MEK--LVIGSRGSELALWQANHIKERLKKEC---SMESEIQIVKTTGDKILDAPLNKIGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L Sbjct: 56 KGLFTKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACTTKRADVRDTFLSMKFPDLMS 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ Sbjct: 116 LPKGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLE 175 Query: 181 KE-KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ ++E+ PS GQGA+ +E ++ ++ +N E++ + ERAF+ Sbjct: 176 IQGAKYRKAFSVEEMIPSMGQGALGVEMLKSHKHFAT-LQKLNDEESAFCCHLERAFIKG 234 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I A G + ++ +GK + G++ A ++ ++ + Sbjct: 235 LNGGCQIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEAFLQS 294 Query: 300 SNKNVFN 306 K + Sbjct: 295 GAKEILE 301 >gi|18310417|ref|NP_562351.1| porphobilinogen deaminase [Clostridium perfringens str. 13] gi|168216823|ref|ZP_02642448.1| porphobilinogen deaminase [Clostridium perfringens NCTC 8239] gi|25453024|sp|Q8XKG4|HEM3_CLOPE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|18145097|dbj|BAB81141.1| hydroxymethylbilane synthase [Clostridium perfringens str. 13] gi|182381001|gb|EDT78480.1| porphobilinogen deaminase [Clostridium perfringens NCTC 8239] Length = 291 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 99/293 (33%), Positives = 156/293 (53%), Gaps = 6/293 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LA + L + ++++ T+GDR + +L +IGGKGLF Sbjct: 3 LIIATRKSKLAQVQTEKVMELLKGKENVDSKKLLVM---TEGDRRLDVSLNKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L + Sbjct: 60 KEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI Sbjct: 120 RIGTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + + F P+ GQGA+ IE + + K ++ ++ +V ER+F+ L+G C Sbjct: 180 SDYFDPKVFLPAIGQGALGIECLKGG-EFNDYFKALDSKEVRTTVEAERSFMKVLNGGCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 S I ++ K + LY G + +I + GN+ D I +G+ A+ I Sbjct: 239 SLIGAYSEVKDNDLYMIGT-FTVNNRIVKKD-ILGNKEDNILLGKKLAEKILE 289 >gi|296123437|ref|YP_003631215.1| porphobilinogen deaminase [Planctomyces limnophilus DSM 3776] gi|296015777|gb|ADG69016.1| porphobilinogen deaminase [Planctomyces limnophilus DSM 3776] Length = 318 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 99/316 (31%), Positives = 149/316 (47%), Gaps = 18/316 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LAL A SL + P + ++ ++T GDR+ L + GG+G+FT Sbjct: 4 LRIATRASQLALWQANFVADSLRSL--DPELTVELVHVTTTGDRVQGEPLRQFGGQGVFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS----LKDL 121 E++ L+ G D AVHS KD+PT GL+++A R + D + T S L L Sbjct: 62 REVQAALLEGRADIAVHSLKDLPTVPTAGLELAAVPARAPVADALLLPTGHSGPASLAML 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGT S RR+A LLR R D+ + RG ++TR+ KL+ + ++LA AG+ RL Sbjct: 122 PRGARIGTGSPRRQAQLLRIRPDLVCSEVRGNLDTRIRKLDAGEYEGLILAVAGLSRLGW 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I IL P+ GQGA+ +E + V + T +V+ ERA L L+ Sbjct: 182 SDRISLILAPPTMFPAAGQGALGLECRHGDEATIRWVSQLEDRQTRLAVDAERAVLRTLE 241 Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSR----------NGNRCDAI-NIG 289 C + + +A K TL+ I++A DG + +GN DA +G Sbjct: 242 AGCHAPVGTWASWKSPETLHLEAILIAPDGSETLAAASSMQGPLSQYGSGNALDAAHELG 301 Query: 290 RDAAQYIRFISNKNVF 305 + A + Sbjct: 302 ANVAHLLLKQGASRYL 317 >gi|168214449|ref|ZP_02640074.1| porphobilinogen deaminase [Clostridium perfringens CPE str. F4969] gi|170714079|gb|EDT26261.1| porphobilinogen deaminase [Clostridium perfringens CPE str. F4969] Length = 291 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 100/292 (34%), Positives = 158/292 (54%), Gaps = 6/292 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LA + L + + ++++ T+GDR + +L +IGGKGLF Sbjct: 3 LIIATRKSKLAQVQTEKVMELLKEKENVDSKKLLVM---TEGDRRLDVSLNKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L + Sbjct: 60 KEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS+RR L +R D+ ++ RG I+TR+ K+ I+LA AG+KRL E+VI Sbjct: 120 RIGTSSIRRAEQLKLFRDDLEIVPIRGNIQTRIKKITEENLDGIILAAAGLKRLGMEEVI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + + F P+ GQGA+ IE + + K ++ ++ +V ER+F+ L+G C Sbjct: 180 SDYFDPKVFLPAIGQGALGIECLKGG-EFNDYFKALDSKEVRTTVEAERSFMKVLNGGCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 S I ++ K + LY G + +I + GN+ D I +G+ A+ I Sbjct: 239 SLIGAYSEVKDNDLYMIGT-FTVNNRIVKKD-ILGNKEDNILLGKKLAEKIL 288 >gi|108562665|ref|YP_626981.1| porphobilinogen deaminase [Helicobacter pylori HPAG1] gi|123073837|sp|Q1CUR5|HEM3_HELPH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|107836438|gb|ABF84307.1| porphobilinogen deaminase [Helicobacter pylori HPAG1] Length = 306 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 96/302 (31%), Positives = 152/302 (50%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++++ PS GQGA+ +E N+ ++ +N E + ER F+ L+G C Sbjct: 181 YRKAFSVKEMIPSMGQGALGVEMLKNHKHFIT-LQKLNDEKSAFCCRLEREFIKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A ++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEEFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|332877010|ref|ZP_08444763.1| hydroxymethylbilane synthase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332685118|gb|EGJ57962.1| hydroxymethylbilane synthase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 290 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 100/296 (33%), Positives = 152/296 (51%), Gaps = 10/296 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 KP RIGTR S LAL A + L + + I+ + ++GD L E+G G+ Sbjct: 2 KPIRIGTRDSQLALWQAETVQYQLELL----GYPTEIVGIKSEGDLELTTPLYEMGVTGI 57 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ ++ L+ GEID AVHS KD+PT L G+ + A L R + D+ + + DL Sbjct: 58 FTKALDIALLKGEIDIAVHSMKDVPTLLPDGIAVGAVLERGNPHDILVYKG--DVSDLDS 115 Query: 124 H-SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + I TSSLRRKA L ++ + RG + TRL KL +N + A AG++R+ + Sbjct: 116 RVATIATSSLRRKAQWLHRYPHHTIENLRGNVNTRLQKLADNPWDGAIFAAAGLERI--D 173 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 K+ ++ L ++ P+P QGAI + H +N Q ++ I+ T+ ERAFL L+G Sbjct: 174 KLPEDYLVLDWMLPAPAQGAIMVLAHEDNVDLQGILLKIHDGKTYIETQVERAFLRALEG 233 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C + I +A G ++F G + + DGK V+ + D G A IR Sbjct: 234 GCTAPIGAYAEFDGEQVHFKGGLWSEDGKQEALVNETFDHID-EFTGEWLASKIRD 288 >gi|29827579|ref|NP_822213.1| porphobilinogen deaminase [Streptomyces avermitilis MA-4680] gi|39931490|sp|Q82P95|HEM32_STRAW RecName: Full=Porphobilinogen deaminase 2; Short=PBG 2; AltName: Full=Hydroxymethylbilane synthase 2; Short=HMBS 2; AltName: Full=Pre-uroporphyrinogen synthase 2 gi|29604679|dbj|BAC68748.1| putative porphobilinogen deaminase [Streptomyces avermitilis MA-4680] Length = 314 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 98/304 (32%), Positives = 146/304 (48%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L +H P ++ + T GD+ L+++ GKG FT Sbjct: 10 IRIVSRDSPMALAQVARVRAELAALH--PRTRTEVVAVKTTGDKWMGD-LSKVDGKGAFT 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +A+L R+DIRD + +L +L Sbjct: 67 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTMFAAFLKRDDIRDALVHPGGLTLDELPP 126 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSS+RR A L + + FRG RL KL +A A+LLA +G++R+ +E Sbjct: 127 GTRIGTSSVRRVAQLAAAYPHLECVPFRGNANRRLEKLAAGEADALLLAVSGLERIGRED 186 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI E+L E P G G + ++ + E + + T ER FL L G Sbjct: 187 VITEVLEPETMMPPIGAGILALQCREGDTGLIETISELGDPGTHREATAERMFLHVLQGH 246 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG+A + L V DGK R D +G A + + Sbjct: 247 CNSPIAGYARTERNGELSLRASVFTLDGKTVLNAHEWAGRLDPATLGTSVAVALLRQGAR 306 Query: 303 NVFN 306 + + Sbjct: 307 ELID 310 >gi|88607872|ref|YP_505325.1| porphobilinogen deaminase [Anaplasma phagocytophilum HZ] gi|88598935|gb|ABD44405.1| porphobilinogen deaminase [Anaplasma phagocytophilum HZ] Length = 304 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 102/293 (34%), Positives = 160/293 (54%), Gaps = 4/293 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+ A ++++ + + II + T GD T+ L +IGGKGLF Sbjct: 7 IRIGTRGSLLAMQQARIVKTAIETNYA--ELSTRIITIKTSGDMNTHVPLYDIGGKGLFI 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ ID AVHSAKD+P + L I LPR D F+S S+ L L++ Sbjct: 65 KEIEEALLDNIIDVAVHSAKDVPGIYSEDLDIPCILPRASALDAFLSSKYDSIASLPLNA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS+RRK LL R D+ +I RG +ETR++K+ + I+LA AG+ R+ K+ +I Sbjct: 125 KIGTSSVRRKVQLLTMRPDLEIIPMRGNVETRISKMQMGECDGIVLAEAGLYRVSKDNLI 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L E + GQGAIC++ + + E++K +N ++ +V+ ER+F+ +DGSC Sbjct: 185 SEVLQPEVMLGAVGQGAICVQCRRYDRRILEILKKLNCHKSYTTVSAERSFMRAVDGSCN 244 Query: 246 SAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + +A A L ++ D + R +A + G + ++ Sbjct: 245 TPLAAMAKYIDMDILTMKCMLAD-DARNMVFTERVFAEQNAESAGYEMGTLLK 296 >gi|225548234|ref|ZP_03769519.1| hypothetical protein RUMHYD_00213 [Blautia hydrogenotrophica DSM 10507] gi|225040673|gb|EEG50919.1| hypothetical protein RUMHYD_00213 [Blautia hydrogenotrophica DSM 10507] Length = 291 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 97/295 (32%), Positives = 148/295 (50%), Gaps = 8/295 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIG+R S LA+ + ++ L + II + T GD I +RTL +IGGKGLF Sbjct: 3 TIRIGSRESKLAVIQSELVQNYLRAQ----GLDAQIITMKTTGDIILDRTLDQIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+++ L+ G D +VHS KD+P ++ + L + AY RED RDV I + K+L L Sbjct: 59 VKELDRALLDGRSDLSVHSLKDLPMEVAQDLPVVAYSKREDPRDVLILPQGE--KELDLS 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IG+SSLRR L + + RG + TRL KL++ + A++LA AG+KRL + Sbjct: 117 KPIGSSSLRRCIQLKKLFPEAECKSVRGNVLTRLEKLDSGQYSALVLAAAGVKRLGLQGR 176 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I +E+ P+ GQG + ++ + N ERAF+ LDG C Sbjct: 177 ISRYFTVEEMLPAAGQGILAVQGKAGQDY--SYLGAYNDRQAQAEALAERAFVRWLDGGC 234 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S +A A C+G L G+ +H+ G A +G + A+ ++ Sbjct: 235 SSPVAAHAVCQGERLQMTGLYYHDLTGQWHKEQIAGETSQAKMLGVELAKRMKGR 289 >gi|225872374|ref|YP_002753829.1| hydroxymethylbilane synthase [Acidobacterium capsulatum ATCC 51196] gi|225793745|gb|ACO33835.1| hydroxymethylbilane synthase [Acidobacterium capsulatum ATCC 51196] Length = 312 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 103/324 (31%), Positives = 151/324 (46%), Gaps = 39/324 (12%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI----GGK 61 RIG+R S LAL A + L + H + I + T GD + + T ++ GGK Sbjct: 2 MRIGSRGSQLALWQANHIAARLRTL----GHEVTIEIIRTTGDALQHVTFAKVSTELGGK 57 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT+EIE+ L G ID AVHS KD+PT L ++A R D RD +S SL L Sbjct: 58 GIFTKEIEEALREGRIDLAVHSLKDLPTDLDPAFTLAAIPERVDPRDALLSARYTSLASL 117 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSS RR+A LL RSD+ +FRG ++TR+ K+ +A AI+LA AG++RL Sbjct: 118 PHGACVGTSSERRRAQLLVHRSDLRFQEFRGNVDTRIRKMVEGQADAIILASAGLERLGL 177 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + +E L E P+ GQGA+ IET ++ + ++ ++H T +V ER LA L Sbjct: 178 TEYRRECLAPEILCPAAGQGALAIETRADDAETLAILASLDHSATRYAVTAERTALASLG 237 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC------------------ 283 G C+ I V +DG + G Sbjct: 238 GGCQVPIGIHC----------APVPGADGAYAIQGVVAGAAAKAASSAAHPVIRVAFEHQ 287 Query: 284 ---DAINIGRDAAQYIRFISNKNV 304 +GR A+ + + Sbjct: 288 QGLSPQALGRQLAEELLRQGAQPF 311 >gi|167754990|ref|ZP_02427117.1| hypothetical protein CLORAM_00494 [Clostridium ramosum DSM 1402] gi|237735283|ref|ZP_04565764.1| porphobilinogen deaminase [Mollicutes bacterium D7] gi|167705040|gb|EDS19619.1| hypothetical protein CLORAM_00494 [Clostridium ramosum DSM 1402] gi|229381028|gb|EEO31119.1| porphobilinogen deaminase [Coprobacillus sp. D7] Length = 297 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 97/292 (33%), Positives = 149/292 (51%), Gaps = 3/292 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +G+R S LAL L + P + I + T GD++ + L +I KG+F Sbjct: 2 KIIVGSRGSSLALKQTEYVIEKLQRAY--PENEYEIKVIHTIGDKMQHIALDKINDKGVF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIEK+L+ ID AVHS KDMP+ GL + L D RD + SL L H Sbjct: 60 VKEIEKELLEHTIDLAVHSLKDMPSDNPAGLVYAKTLAPSDYRDCLVLKNCSSLARLPQH 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + I T S RRK LL+ R D+ ++D RG + TRL K+ N + ++LA AG+KRL E + Sbjct: 120 ATIATGSKRRKYQLLKLRPDLKIVDIRGNVNTRLQKMANQEIDGLVLASAGLKRLGLEDL 179 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQG + I+ + + ++ I+ E T + ER FL ++GSC Sbjct: 180 ISEYLDETKMIPACGQGILAIQVRQ-DSELLTMINNISDEITTTRMELERLFLKTVNGSC 238 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + G+A G ++FYG++ DG + + + + DA A+ + Sbjct: 239 HIPVGGYAKIIGDQVHFYGLLGNEDGTVLKNIDKKFSLKDASEEVTALAEML 290 >gi|254388880|ref|ZP_05004112.1| porphobilinogen deaminase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|254393333|ref|ZP_05008481.1| porphobilinogen deaminase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294813175|ref|ZP_06771818.1| Porphobilinogen deaminase 1 [Streptomyces clavuligerus ATCC 27064] gi|326441528|ref|ZP_08216262.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064] gi|197702599|gb|EDY48411.1| porphobilinogen deaminase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|197706968|gb|EDY52780.1| porphobilinogen deaminase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294325774|gb|EFG07417.1| Porphobilinogen deaminase 1 [Streptomyces clavuligerus ATCC 27064] Length = 319 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 92/317 (29%), Positives = 156/317 (49%), Gaps = 17/317 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ R+GTR S LA+A + + + + P + ++ ++T GD I+ L +IGG Sbjct: 1 MTERALRLGTRRSMLAMAQSGQVAQEVRRLTGRP---VELVEITTYGD-ISREQLAQIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L+ GE+D AVHS KD+PT L ++A RED RDV ++ + Sbjct: 57 TGVFVAALREALLRGEVDFAVHSLKDLPTGQPDELALAAIPRREDPRDVLVARDGLTFDR 116 Query: 121 LALHSVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + +GT S RR A L I + RG I+TR+ + + K A++LA AG+ Sbjct: 117 LPDGARVGTGSPRRMAQLNAYARAHGLRIETVPIRGNIDTRIGYVRSGKLDAVVLAAAGL 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ + + ++L+++ P+PGQGA+ IE + + ++ T +V ER+ Sbjct: 177 NRIGRADEVTDVLSVDSVLPAPGQGALAIECAAADADLAATLGALDDPHTRVAVTAERSL 236 Query: 237 LAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAIN 287 LA L+ C + + A G + G+V +DG ++S G DAI Sbjct: 237 LAALEAGCSAPVGALADLLGDEEVVTEMRLRGVVGTTDGSTLVQLSTTGPVPTSHGDAIA 296 Query: 288 IGRDAAQYIRFISNKNV 304 +GR+ A + + Sbjct: 297 LGRELASEMLAKGAAGL 313 >gi|291615715|ref|YP_003518457.1| HemC [Pantoea ananatis LMG 20103] gi|291150745|gb|ADD75329.1| HemC [Pantoea ananatis LMG 20103] Length = 244 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 81/234 (34%), Positives = 124/234 (52%) Query: 72 LISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSS 131 ++ D AVHS KD+P +GL + R+D RD F+S+ S+ +L +VIGTSS Sbjct: 1 MLENRADLAVHSMKDVPVAFPEGLGLVTICQRDDPRDAFVSNHYASIDELPQGAVIGTSS 60 Query: 132 LRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNI 191 LRR+ + R D+ + RG + TRL+KL+ + AI+LA AG+ RL I++ L Sbjct: 61 LRRQCQISARRPDLVIRSLRGNVGTRLSKLDAGEYDAIILAAAGLNRLGLADRIRQPLPA 120 Query: 192 EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGF 251 + P+ GQGA+ IE +++ L++ +NH+DT V ERA L+G C+ I F Sbjct: 121 DISLPAVGQGAVGIECRLDDSTLIALLQALNHDDTAVCVKAERAMNTRLEGGCQVPIGSF 180 Query: 252 AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 A +G L+ G+V A DG + R G R A +G A + + + Sbjct: 181 AVLEGDELWLRGLVGAPDGSVMVSGERRGPRDQAEQMGISLADELLNGGAREIL 234 >gi|182416929|ref|ZP_02948313.1| porphobilinogen deaminase [Clostridium butyricum 5521] gi|237667199|ref|ZP_04527183.1| hydroxymethylbilane synthase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379227|gb|EDT76728.1| porphobilinogen deaminase [Clostridium butyricum 5521] gi|237655547|gb|EEP53103.1| hydroxymethylbilane synthase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 292 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 110/297 (37%), Positives = 162/297 (54%), Gaps = 8/297 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+K + TR S LA SL + ++I+ T+GDR + +L +IGG Sbjct: 1 MDK--LILATRKSRLAQVQTEIVMDSLKNKINKESEKLLIV---TEGDRKLDVSLNKIGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF ++IE L+ G D AVHS KD+P +L +I+A + REDIRDV IS S Sbjct: 56 KGLFVKDIECALLEGSADAAVHSMKDVPYELSNEFEITAIIEREDIRDVLISKDGISFSK 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSS+RR A L RSDI V+ RG ++TRL K+ + I+LA AGI RLK Sbjct: 116 LRYGAKIGTSSIRRAAQLKLLRSDIEVVPIRGNVQTRLAKMESENLDGIILAAAGIHRLK 175 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + +I E + ++F P+ QGAI IE V N + + K++++ + +V ER+F+ EL Sbjct: 176 LDSIITEYFDPKEFIPAVSQGAIGIEC-VKNSENSKYFKMLDNSEARITVEAERSFMREL 234 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 G C S I ++ G LY G + +G + G + + + +GR A+ I Sbjct: 235 KGDCHSLIGAYSEVTGDELYMIG-IYDLNG-VIVRKDIKGKKSNHLEVGRKLAEKIL 289 >gi|256820282|ref|YP_003141561.1| porphobilinogen deaminase [Capnocytophaga ochracea DSM 7271] gi|256581865|gb|ACU93000.1| porphobilinogen deaminase [Capnocytophaga ochracea DSM 7271] Length = 288 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 97/293 (33%), Positives = 151/293 (51%), Gaps = 8/293 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL A ++ L + + I+ + GD ++ L E+G G+F Sbjct: 3 TIRIGTRDSELALWQAKTVQNQLKTL----GYPTEIVSTKSHGDIELSKPLYEMGVTGIF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+ ++ L++GEID AVHS KD+PT L +G+ + A L R + DV + S + A Sbjct: 59 TKALDIALLNGEIDIAVHSMKDVPTALPEGIAVGAVLKRGNPHDVLVYKGDLSFLE-AEI 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + I TSSLRRKA L ++ RG + TRL KL +N + + A AG++R+ K+ Sbjct: 118 ATIATSSLRRKAQWLHRYPHHNIESLRGNVNTRLQKLTDNPWNGAIFAAAGLERIN--KL 175 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ L ++ P+P QGAI + +N Q+ + ++ + T+ + ER FL L+G C Sbjct: 176 PEKHLVLDWMLPAPAQGAIVVVVREDNVALQKKLLPLHDDYTYIATQLERDFLRALEGGC 235 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + I FA K LYF G + + DGK + + D G A I+ Sbjct: 236 TAPIGAFAEFKDDKLYFKGGLWSEDGKEASVIDEVLTQID-EYTGEKLATMIK 287 >gi|145220672|ref|YP_001131350.1| porphobilinogen deaminase [Mycobacterium gilvum PYR-GCK] gi|315442377|ref|YP_004075256.1| hydroxymethylbilane synthase [Mycobacterium sp. Spyr1] gi|189028094|sp|A4T340|HEM3_MYCGI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|145213158|gb|ABP42562.1| hydroxymethylbilane synthase [Mycobacterium gilvum PYR-GCK] gi|315260680|gb|ADT97421.1| hydroxymethylbilane synthase [Mycobacterium sp. Spyr1] Length = 312 Score = 298 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 95/310 (30%), Positives = 151/310 (48%), Gaps = 14/310 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H+ ++ +ST+GDR + + +IG G+FT Sbjct: 2 IRIGTRGSLLATTQAGTIRDALIAA----GHDAELVIISTEGDRRADEPIADIG-VGVFT 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + +D AVHS KD+PT + I+A RED RD ++ L +L S Sbjct: 57 AALREAIADNVVDAAVHSYKDLPTAVDPRFMIAATPVREDARDALVARDGMVLGELPAGS 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS RR A L + + RG ++TRLN++++ + AI++A AG+ R+ + +V+ Sbjct: 117 VIGTSSPRRVAQLKALGLGLEIRPLRGNLDTRLNRVSSGELDAIVVAKAGLSRIGRLEVV 176 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ IE + +L+ ++ DT +V ER LAEL+ C Sbjct: 177 TETLEPVQMLPAPAQGALAIECRAGDTALAQLLAELDDADTRAAVTAERTLLAELEAGCS 236 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V DG S G+ A +G A + Sbjct: 237 APVGAIAEVVESIDEDGRVFEELSLRGCVATLDGSDVIRASGIGSPDRARELGLSVAAEL 296 Query: 297 RFISNKNVFN 306 + +++ + Sbjct: 297 FDLGARDLLD 306 >gi|300774730|ref|ZP_07084593.1| hydroxymethylbilane synthase [Chryseobacterium gleum ATCC 35910] gi|300506545|gb|EFK37680.1| hydroxymethylbilane synthase [Chryseobacterium gleum ATCC 35910] Length = 302 Score = 298 bits (765), Expect = 5e-79, Method: Composition-based stats. Identities = 107/301 (35%), Positives = 159/301 (52%), Gaps = 8/301 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LAL A E L + + + I+P+ + GD+ N+ L +G G+ Sbjct: 2 KSIRIGTRNSALALWQAREVARHLQNNNYL----TEIVPIVSSGDKNLNQPLYSLGITGV 57 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT +++ L++ EID AVHS KD+PT+L + +++ AYL R+ +D+ I + K+ Sbjct: 58 FTRDLDIALLNDEIDIAVHSLKDVPTQLPQNIEMIAYLERDYPQDILIRKESSRNKEF-H 116 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + TSSLRR+A LR D RG I+TRL KL A +L+ AGIKR+K E Sbjct: 117 ELKLATSSLRRRAFWLRNYPTAEFSDIRGNIQTRLQKLEEGDFDATILSLAGIKRMKME- 175 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + E+L + +P QG I + H + P+ E+V+ INH++T V ER FL+ L+G Sbjct: 176 IDYEMLPL--MISAPSQGVISVAGHTDKPEINEIVRQINHQETQICVEIERNFLSTLEGG 233 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C + I FA G + F + + DGK V N A N G A+ + K Sbjct: 234 CTAPIGAFAEIIGDQIRFKAALCSLDGKNCIAVDENFVYTPAENFGEKYAKVVLENGGKE 293 Query: 304 V 304 + Sbjct: 294 L 294 >gi|38233015|ref|NP_938782.1| porphobilinogen deaminase [Corynebacterium diphtheriae NCTC 13129] gi|55976429|sp|Q6NJK0|HEM3_CORDI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|38199274|emb|CAE48905.1| Porphobilinogen deaminase [Corynebacterium diphtheriae] Length = 294 Score = 298 bits (765), Expect = 6e-79, Method: Composition-based stats. Identities = 85/302 (28%), Positives = 141/302 (46%), Gaps = 9/302 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IGTR S LA + R L P+ ++ ++T GD N E G G+F Sbjct: 2 TLKIGTRGSLLATTQSGHVRDDLR------PYEAELVIVTTHGDV--NMAPVERIGVGVF 53 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+ + ++L +G D AVHS KD+PT+L R D RD I+ SL DL Sbjct: 54 TQALREELHTGGCDIAVHSFKDLPTELDP-RFHLVVPKRADFRDCLIARDGLSLADLPAG 112 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 ++IGT + RR + + R D+ + RG I+TR+ K+ + + A++LAYAG+ R+ + Sbjct: 113 ALIGTGAPRRISQIKALRPDVECVPLRGNIDTRMGKVTSGELDAVVLAYAGLTRVGRGDE 172 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ + +DF P+P QGA+ +E ++ A+E + I E ER L L+ C Sbjct: 173 ATQVFDPQDFLPAPAQGALAVECRADDAYAREAIDSICDEQAQVCAVTERVVLNRLEAGC 232 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A A TL V+A DG + + + + + + + + Sbjct: 233 TAPVAAHATLNDGTLTLTAAVIALDGSKVVRRELSAPVAENVALAEELTRALIADGAATI 292 Query: 305 FN 306 Sbjct: 293 LG 294 >gi|313905566|ref|ZP_07838929.1| porphobilinogen deaminase [Eubacterium cellulosolvens 6] gi|313469629|gb|EFR64968.1| porphobilinogen deaminase [Eubacterium cellulosolvens 6] Length = 299 Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats. Identities = 93/299 (31%), Positives = 145/299 (48%), Gaps = 9/299 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 ME IGTR S LAL L + K P ++ ++ ++T GDRI +R L +IGG Sbjct: 1 MENNRIIIGTRESRLALVQTGMVADFLRE--KYPERSVELLKMTTTGDRILDRRLDQIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+++ L +GE D VHS KD+P +L + L + RED RDV + + D Sbjct: 59 KGLFVKELDRALAAGECDLCVHSMKDLPMELPEELPLLGCSRREDPRDVLVLPAGRKEPD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 IGTSS RR + + D RG ++TRL KL+ ++LA AG+KR+ Sbjct: 119 --PSLPIGTSSRRRILQVQKLYPDAKFESVRGNLQTRLKKLDEGLYGGLILAAAGLKRMG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I + E+ P+ GQG + I+ + + T + ERAF+ L Sbjct: 177 LENRISRYFSTEEVIPAAGQGVLAIQGRADTYDFD--LDGFIDPGTMLATLAERAFVRRL 234 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYI 296 +G C +A + G +L G+ + ++ R+ + +A +GR A+ + Sbjct: 235 NGGCSLPVAAYGEFDGESLALRGLYYDEEKRVSRTEERSAIVRTKEEAEALGRGLAEQL 293 >gi|303239240|ref|ZP_07325769.1| porphobilinogen deaminase [Acetivibrio cellulolyticus CD2] gi|302593285|gb|EFL63004.1| porphobilinogen deaminase [Acetivibrio cellulolyticus CD2] Length = 293 Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats. Identities = 94/297 (31%), Positives = 148/297 (49%), Gaps = 9/297 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K R+G+R S LA+ + ++ +I + T GD+I + TL +IGGKGL Sbjct: 2 KTIRVGSRDSKLAIIQSQMVMDAIKSYDS--NIKTELITMKTTGDKILDVTLDKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+++ LI+GE+D VHS KDMP ++ + L + A RED RDV I Q+ D Sbjct: 60 FVKELDEALINGEVDITVHSYKDMPMQIDEDLPVVALSTREDERDVLILPKGQTFSDKP- 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +G SS RR L ++ RG + TRL KL++ + AI+LA AGIKRL E+ Sbjct: 119 ---VGCSSERRTMQLKEL-GFENIKPLRGNVITRLKKLDDGEYSAIVLAAAGIKRLGLEE 174 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I +++ P+ QG I ++ ++ + + ERAF+ L+G Sbjct: 175 RISRYFTVDEIMPAACQGIIAVQARKGED--TSYLRCFHSYASQVISEAERAFITALNGG 232 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C S +A +AY L G+ + + KI S++G A +G + A ++ Sbjct: 233 CSSPVAAYAYLDKDILVLNGLYVDKENKIAVRGSQHGTPAQAAVLGEELANRLKERG 289 >gi|302556915|ref|ZP_07309257.1| porphobilinogen deaminase [Streptomyces griseoflavus Tu4000] gi|302474533|gb|EFL37626.1| porphobilinogen deaminase [Streptomyces griseoflavus Tu4000] Length = 311 Score = 298 bits (764), Expect = 7e-79, Method: Composition-based stats. Identities = 97/304 (31%), Positives = 146/304 (48%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L P ++P+ T GD+ L+ + GKG FT Sbjct: 7 IRIVSRDSPMALAQVERVRAELAAAR--PGVRTEVVPVKTTGDKWLGD-LSAVEGKGAFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++G D AVH KD+P L G +A+L R+D+RD + +L +LA Sbjct: 64 KEVDAALLAGRADVAVHCVKDVPADRPLPAGTVFAAFLKRDDVRDALVHPDGLTLDELAP 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSS+RR A L ++ + RG R+ KL +A A+LLA +G++R+ + Sbjct: 124 GTRIGTSSVRRVAQLAVSHPHLTCVPLRGNANLRMEKLAAGEADALLLAVSGLERIGRAD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI E+L+ E P G G + ++ + E V + H DT ER FL L G Sbjct: 184 VISEVLSPEAMMPPIGAGILALQCREGDTALIEAVSALGHPDTHREATAERMFLHVLQGH 243 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG+A L V +DGK R D +G A + + Sbjct: 244 CNSPIAGYAQVDLSGELSLRACVFTADGKTRLNAHEWAGRLDPATLGTSVAVALLRQGAR 303 Query: 303 NVFN 306 + + Sbjct: 304 EIID 307 >gi|154496817|ref|ZP_02035513.1| hypothetical protein BACCAP_01110 [Bacteroides capillosus ATCC 29799] gi|150274069|gb|EDN01169.1| hypothetical protein BACCAP_01110 [Bacteroides capillosus ATCC 29799] Length = 287 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 88/296 (29%), Positives = 144/296 (48%), Gaps = 11/296 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIG+R S LA+ + ++ P + ++ + T GD+I +RTL ++GGKGLF Sbjct: 2 KLRIGSRESVLAVTQSELVMEAIRAF--DPSIELELVTMKTTGDKILDRTLDKVGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 E++ L+ G +D VHS KD+P + L ++ + RED RD + ++ +L Sbjct: 60 VRELDAALLEGRVDITVHSCKDLPMETDPRLPLAGFSKREDPRDALVLPAGKT--ELDPS 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IG +S RR L D+ V RG ++TRL KL+ + A++LA AG+KRL E Sbjct: 118 LPIGCASRRRAIQLAALYPDMEVAPVRGNVQTRLRKLDEGQYSALVLASAGLKRLGLEGR 177 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E+ P+ GQG + ++T + + + + ERAF+ LDG C Sbjct: 178 IARYFTAEEMIPAAGQGILAVQTRAG--ENYPCLAAVTDREGTICALAERAFVRMLDGGC 235 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 S +A G TL G+ +G+ +G +A +G A+ ++ + Sbjct: 236 SSPVAAHGVVDGDTLILTGM--DENGR---RDRISGPVTEAEQLGETLARRMKEAA 286 >gi|296138401|ref|YP_003645644.1| porphobilinogen deaminase [Tsukamurella paurometabola DSM 20162] gi|296026535|gb|ADG77305.1| porphobilinogen deaminase [Tsukamurella paurometabola DSM 20162] Length = 318 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 15/310 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA A R +L+ H ++ ++T GD ++ + +IG G+F Sbjct: 14 PLRIGTRGSLLATTQAGTVRDALIAA----GHPAELVIVTTPGDLSSD-PVEKIG-VGVF 67 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T + L +GE+D AVHS KD+PT L ++A PRED RD ++ L +L Sbjct: 68 TSALRDALANGEVDVAVHSYKDLPTAPDDRLVLAAVPPREDSRDALVARDGMVLGELPAG 127 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SV+GTSS RR L + + RG +++RL K+ + + AI++A AG+KR+ + Sbjct: 128 SVVGTSSPRRATQLTALGLGLEIRPLRGNLDSRLRKVADGELDAIVVALAGLKRIGRHDE 187 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E L+ P+P QGA+ +E + Q ++ ++ T +V ERA LAEL+ C Sbjct: 188 VTEALDPVQMLPAPAQGALAVECRRGDADLQSVLSELDDHWTRAAVTAERALLAELEAGC 247 Query: 245 KSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 + + A L GI LA+DG + S G +A +G A+ Sbjct: 248 TAPVGAIAEVVESLDDDGRIFEELSLRGIALAADGSDSVKASAVGPVGEAGALGTALARE 307 Query: 296 IRFISNKNVF 305 + + +++ Sbjct: 308 LLDLGARDLL 317 >gi|72004296|ref|XP_781025.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115932051|ref|XP_001188143.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 324 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 96/318 (30%), Positives = 145/318 (45%), Gaps = 17/318 (5%) Query: 1 MEKK--PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M K R+G+R S LA+ L VH P I+ + T GD I ++ L I Sbjct: 1 MADKMEIVRVGSRKSELAMIQTNHVVEMLQKVH--PETEFKIVTMETIGDHIQDKPLASI 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---A 115 G LFT+E+EK L E+D VHS KDMP++L + I A RED D + H Sbjct: 59 GESNLFTKELEKALALDEVDMLVHSLKDMPSRLPSNMAIGAICEREDPHDALVLHKKLTG 118 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYA 174 S++ + SV+GTSS+RR A L R + D RG + TRL KL+ + ++LA A Sbjct: 119 ISIETMKEGSVLGTSSVRRVAQLKRKFPHLVFKDVRGNLNTRLRKLDEGQVYDGLVLAVA 178 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G+ R+ E I +IL + S QGA+ IE N + EL++ +NH T ER Sbjct: 179 GMMRMGWEHRISQILKPDICKYSVSQGALGIEIKTKNRRMHELLRQLNHVPTLIRCIAER 238 Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN------RCDAINI 288 L L+G C + +A + + + ++ ++ S +A + Sbjct: 239 GLLKTLEGGCSAPVAVHSELEENRHSLDAE---TNEEMKLFSSVIAPWVSQHAMQEAEAL 295 Query: 289 GRDAAQYIRFISNKNVFN 306 G A+ + + Sbjct: 296 GVSVAKGLFDKGAGPILE 313 >gi|269215656|ref|ZP_06159510.1| hydroxymethylbilane synthase [Slackia exigua ATCC 700122] gi|269131143|gb|EEZ62218.1| hydroxymethylbilane synthase [Slackia exigua ATCC 700122] Length = 318 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 96/311 (30%), Positives = 143/311 (45%), Gaps = 7/311 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M IGTR S LAL A + ++ P + I + T GDR L EIG Sbjct: 1 MHNDTCVIGTRGSALALWQAHAVKRAIEASR--PDVSCEIRVIKTTGDRNLATPLAEIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQS 117 KGLFT+++E L++GE+D VHS KD+PT+L G I+A L R D RDV + A+ Sbjct: 59 KGLFTKDLEAALVAGEVDICVHSMKDVPTELANGCGITAMLERADARDVIVCGPRIQAEC 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L D+ S +GT SLRR A + S I RG ++TR+ K + +LA AG+ Sbjct: 119 LADVPAGSRLGTGSLRRVAQIRAGFSGIVPTPIRGNVDTRIAKACGEEYEGAVLAAAGVT 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ I + + + P+ GQGA+ IE + + + EL I+ T V ER L Sbjct: 179 RMGLADRIAAYIPVSEIVPAVGQGAVGIEARLGDERVCELCARIDDAATRVCVEAERIVL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA--INIGRDAAQY 295 L+G C+ + + + +V + DG V+ DA ++ R Sbjct: 239 CALEGGCQVPMGAYMRFDSGDIAADAVVASVDGSRVARVALRVPASDATPADVARRVLAE 298 Query: 296 IRFISNKNVFN 306 + + Sbjct: 299 LSAQGADVILE 309 >gi|298674197|ref|YP_003725947.1| porphobilinogen deaminase [Methanohalobium evestigatum Z-7303] gi|298287185|gb|ADI73151.1| porphobilinogen deaminase [Methanohalobium evestigatum Z-7303] Length = 308 Score = 298 bits (763), Expect = 9e-79, Method: Composition-based stats. Identities = 97/302 (32%), Positives = 146/302 (48%), Gaps = 7/302 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IGTR S LAL L + N + + T GD T+R L E+GG G F Sbjct: 3 LIIGTRGSSLALTQTRRVSQMLKE----EGVNTFLKIIKTSGDSFTDRPLHELGGVGAFV 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EI+++++SGE+D AVHS KD+PT+ + L SA L R+ D ++ +L +L + Sbjct: 59 REIDERMLSGELDIAVHSMKDLPTERPEELPTSAVLKRDSPFDALLTRDGSTLDELPEGA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGT+SLRRK+ +LR+R D V RG I+TRL KL + I+LA AG++R+ + Sbjct: 119 VIGTTSLRRKSQVLRYRPDFDVQSLRGNIDTRLKKLESGIYDGIILAEAGLRRMGW-DIP 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ + F PS QGAI + + + +V INH T ER + + G C Sbjct: 178 VHQLDTDHFCPSANQGAIAVVAKSGDES-ENVVSRINHPQTKIETEIERILIGNVGGGCI 236 Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 I +A ++ VLA DG + V + + + + + K + Sbjct: 237 VPIGAYAEFVNDEKIHIRSEVLALDGSHYVAVDDVISADNYKEEANELGEELVRKGGKKL 296 Query: 305 FN 306 Sbjct: 297 VQ 298 >gi|307331356|ref|ZP_07610476.1| porphobilinogen deaminase [Streptomyces violaceusniger Tu 4113] gi|306882979|gb|EFN14045.1| porphobilinogen deaminase [Streptomyces violaceusniger Tu 4113] Length = 329 Score = 298 bits (763), Expect = 9e-79, Method: Composition-based stats. Identities = 95/313 (30%), Positives = 155/313 (49%), Gaps = 17/313 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + + +V P + ++ ++T GD + L +IGG G+F Sbjct: 15 PLRLGTRRSALAMAQSGLVADLVREVTGRP---VELVEITTYGDT-SREHLAQIGGTGVF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L+SGEID AVHS KD+PT GL+++A RED RD I+ + L Sbjct: 71 VSALREALLSGEIDLAVHSLKDLPTAEPDGLRLAAIPRREDPRDALIARDGLTFAQLPPG 130 Query: 125 SVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 S IGT S RR A L + DI + RG ++TR+ + + + A++LA AG+ RL Sbjct: 131 SRIGTGSPRRAAQLNAWARAFGLDIETVPIRGNVDTRIGYVRSGRLDAVVLAAAGLIRLG 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + E+L++ P+PGQGA+ +E ++ + I+ T +V ER+ LA L Sbjct: 191 RIGEATELLDVGHVLPAPGQGALAVECAASSVALTARLAEIDDPYTRVAVTAERSLLAAL 250 Query: 241 DGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGN----RCDAINIGRD 291 + C + + A + G+V +DG ++S G +A ++GR+ Sbjct: 251 EAGCSAPVGALADLLADGQAVTEMRLRGVVGTTDGTTLVQLSTTGPVPASPSEAGDLGRE 310 Query: 292 AAQYIRFISNKNV 304 A + + Sbjct: 311 LAAEMLAKGAAGL 323 >gi|118376440|ref|XP_001021402.1| porphobilinogen deaminase family protein [Tetrahymena thermophila] gi|89303169|gb|EAS01157.1| porphobilinogen deaminase family protein [Tetrahymena thermophila SB210] Length = 362 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 102/335 (30%), Positives = 161/335 (48%), Gaps = 30/335 (8%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVH--KIPPHNIVIIPL--------------- 43 ++ + F+I +R S LAL+ +E L+ V + N ++P+ Sbjct: 16 LKNRKFKIASRSSQLALSQTYEVIDLLVGVKELGLTKENFEVVPISNAPGKNCTLKFKIN 75 Query: 44 ------STKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQI 97 + KGD+ L +GG G+FT+ +E +L++ D AVHS KD+PT + + L I Sbjct: 76 ITNKQFTNKGDQNLKDPLYVMGGVGVFTKIVEVELLNKNGDIAVHSLKDLPTIIDERLFI 135 Query: 98 SAYLPREDIRDVFIS---HTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKI 154 A P + DV I H + LKDL SVIGTSSLRR L + + RG + Sbjct: 136 GAVPPLKPRGDVVIFNEKHKGKELKDLPEGSVIGTSSLRRITNLKNRYPHLKYENIRGNL 195 Query: 155 ETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKA 214 TRL KL N + AI+LA AG+ RL + + + L EDF +PGQGA+ ++ ++ +A Sbjct: 196 NTRLTKLENGQYDAIILAEAGVFRLGWIEKVGQFLKQEDFLYAPGQGALGVQCRADDKEA 255 Query: 215 QELVKVINHEDTWDSVNCERAFLAELDG---SCKSAIAGFAYCKGSTLYFYGIVLASDGK 271 L+ IN ++ V+ ER FL +L+G CK IA + TL G V + + Sbjct: 256 IALLSYINQKEPRIRVDAERQFLNKLEGVILGCKLPIAVHSEIIDQTLRLTGQVWSLEAD 315 Query: 272 IFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 G+ D ++G ++ ++ + Sbjct: 316 KTIREVIEGHISD-QDLGLKLSEKMKQAGAGEILE 349 >gi|256397425|ref|YP_003118989.1| porphobilinogen deaminase [Catenulispora acidiphila DSM 44928] gi|256363651|gb|ACU77148.1| porphobilinogen deaminase [Catenulispora acidiphila DSM 44928] Length = 317 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 90/305 (29%), Positives = 154/305 (50%), Gaps = 7/305 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++ R+GTR S LALA + +L + ++ ++T GD + L+ IGG G Sbjct: 16 ERALRLGTRASTLALAQSGMVAEALTAAT---GRAVELVHVTTYGDT-SREALSVIGGTG 71 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F + + + +G++D AVHS KD+PT +GL ++A R + D ++ L DL Sbjct: 72 VFVNALREAIYAGDVDFAVHSLKDLPTAAPEGLHLAAITERAAVNDALVARDGLKLADLP 131 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GT + RR ALL R D+ ++ RG ++TR+N + + A+++A AG++RL + Sbjct: 132 AGAKVGTGAARRMALLKMIRPDLEIVPIRGNVDTRVNHVRSGDLDAVVVALAGLQRLGRA 191 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + E+ + PSPGQGA+ +E +P+ EL+ V++ T +V ER LA L+ Sbjct: 192 EEATEVFGPDVILPSPGQGALAVEC--KDPELAELLAVLDSPLTRAAVVAERTMLAVLEA 249 Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C + + G A + L G+V G +S G + +GR AQ + Sbjct: 250 GCSAPVGGHAIALDDNVLSLTGVVATVSGSRGLRLSHAGAVSEPEALGRRVAQALLADGA 309 Query: 302 KNVFN 306 + Sbjct: 310 AELME 314 >gi|19551663|ref|NP_599665.1| porphobilinogen deaminase [Corynebacterium glutamicum ATCC 13032] gi|62389318|ref|YP_224720.1| porphobilinogen deaminase [Corynebacterium glutamicum ATCC 13032] gi|25453022|sp|Q8NT90|HEM3_CORGL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|21323183|dbj|BAB97811.1| Porphobilinogen deaminase [Corynebacterium glutamicum ATCC 13032] gi|41324652|emb|CAF19134.1| PORPHOBILINOGEN DEAMINASE [Corynebacterium glutamicum ATCC 13032] Length = 302 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 90/305 (29%), Positives = 142/305 (46%), Gaps = 10/305 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IGTR S LA A R L + + + ++T GD N + E G G+F Sbjct: 2 TLKIGTRGSKLATTQAGTIRDQLKHYGR----DAELHIVTTPGDV--NMSPVERIGVGVF 55 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+ + L SGE D AVHS KD+PT R D R+ I+ +L +L Sbjct: 56 TQALRDVLHSGECDVAVHSMKDLPTATDP-RFHLVVPTRADSREALIARDGLTLAELPEG 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTS+ RR + L R D+ ++ RG I+TR+ K+ + + A++LAYAG+ R+ + Sbjct: 115 AKVGTSAPRRISQLKAIRPDLEILPLRGNIDTRMGKVTSGELDAVMLAYAGLTRVGMQDR 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E+ + + P+P QGA+ IE ++ + + ++ H DT+ S ER L L+ C Sbjct: 175 ATEVFDADIIMPAPAQGALAIECRADDTETVRALNMLMHADTFVSAVAERTVLNRLEAGC 234 Query: 245 KSAIAGFAYCK---GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 + +A A G T+ V A DG S G+ +G AQ + Sbjct: 235 TAPVAAHATLDGYSGDTMTLTAGVYALDGSDQLVFSAEGDGARPEELGELVAQQLIDAGA 294 Query: 302 KNVFN 306 N+ Sbjct: 295 ANLLG 299 >gi|163787007|ref|ZP_02181454.1| porphobilinogen deaminase [Flavobacteriales bacterium ALC-1] gi|159876895|gb|EDP70952.1| porphobilinogen deaminase [Flavobacteriales bacterium ALC-1] Length = 526 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 97/308 (31%), Positives = 153/308 (49%), Gaps = 10/308 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LA+ A +S L + H V++P+ + GD + ++ L E+G Sbjct: 1 MS-KIIRIGTRDSQLAMWQAKTVQSQLEHL----GHKTVLVPVKSTGDLVLDKPLYELGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ +++ +ID AVHS KD+PT L KG+ +A L R +I D + + Sbjct: 56 TGIFTKTLDIAMLNEDIDIAVHSLKDVPTILPKGIVQAAVLKRGNINDTLVYKANEEFLS 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKRL 179 A +VI T SLRR+A L +++ RG + +RL KL N +A + A AG+ RL Sbjct: 116 -ARDAVIATGSLRRRAQWLNRYPTHTIVGLRGNVNSRLEKLETNEDWNAAIFAGAGLGRL 174 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 +N+ P+P QGAI I ++ + + + IN E + ER FL Sbjct: 175 GITPENS--INLHWMIPAPAQGAIMITALESDEETRAICAEINDEVSEICTTIEREFLNR 232 Query: 240 LDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+G C + I Y K + F G++L+ DG E ++ + + AA YI Sbjct: 233 LEGGCTAPIGAICYINKEEEVNFKGVLLSKDGTKKIEYTKVVALDQKDELAKLAADYIIE 292 Query: 299 ISNKNVFN 306 K + + Sbjct: 293 KGGKTLID 300 >gi|326383045|ref|ZP_08204734.1| porphobilinogen deaminase [Gordonia neofelifaecis NRRL B-59395] gi|326198181|gb|EGD55366.1| porphobilinogen deaminase [Gordonia neofelifaecis NRRL B-59395] Length = 315 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 93/310 (30%), Positives = 144/310 (46%), Gaps = 15/310 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA A + L H ++ +ST GD ++ + +IG G+F Sbjct: 8 TIRIGTRGSLLATTQAQDIADRLTAA----GHPAELVIISTAGDT-SSAPVAQIG-VGVF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T I L SGE D A+HS KD+PT L ++A R D RD +S L +L Sbjct: 62 TTAIRLALRSGECDVAIHSYKDLPTAPEDDLAMAAVPTRVDPRDALVSRDGMVLGELPSG 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SV+GTSS RR A L + + RG +++RL K+ + + AI++A AG+ R+ + V Sbjct: 122 SVVGTSSPRRAAQLRALGLGLEIRPLRGNLDSRLGKVASGELDAIVVARAGLVRIGRADV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E L+ +P QGA+ +E ++ + ++ ++ T +V+ ERA LA L+ C Sbjct: 182 VTEALDPLVMLSAPAQGALAVECRSDDAELVRILAELDDPSTRAAVDAERAVLATLEAGC 241 Query: 245 KSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 + + A S L V A DG S G A +G+D A Sbjct: 242 TAPVGALAEVVDSIDEDGRIFAELSLRAAVAAEDGSEVIRASVVGPVDRAAQLGKDLAAE 301 Query: 296 IRFISNKNVF 305 + + + Sbjct: 302 LLELGAAALV 311 >gi|213964237|ref|ZP_03392470.1| porphobilinogen deaminase [Capnocytophaga sputigena Capno] gi|213953127|gb|EEB64476.1| porphobilinogen deaminase [Capnocytophaga sputigena Capno] Length = 293 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 98/297 (32%), Positives = 156/297 (52%), Gaps = 9/297 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LAL A + L + ++ I+ + GD ++ L E+G G+ Sbjct: 2 KTIRIGTRDSELALWQAKTVQHQLEAL----GYSTEIVSTKSHGDIELSKPLYEMGVIGI 57 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ ++ L++GEID AVHS KD+PT L G+ + A L R + DV + S D+ + Sbjct: 58 FTKALDIALLNGEIDIAVHSMKDVPTALPDGIVVGAVLKRGNPHDVLVYKGDLSFLDVEI 117 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + I TSSLRRKA L ++ + RG + TRL KL +N + + A AG++R+ K Sbjct: 118 -ATIATSSLRRKAQWLHRYPHHNIENLRGNVNTRLQKLADNPWNGAIFAAAGLERIN--K 174 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + + L ++ P+P QGAI + H +N Q ++ I+ +T+ + ERAFL L+G Sbjct: 175 LPENHLRLDWMFPAPAQGAIMVTLHEDNVPLQGVLLRIHDGNTYVATQVERAFLRALEGG 234 Query: 244 CKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 C + I FA G +YF G + + DGK + + + + G A+ ++ Sbjct: 235 CTAPIGAFAQYDGQQKVYFKGGLWSEDGKKAAVIEEILTQIN-EHTGEQLAEKVKSK 290 >gi|188589216|ref|YP_001922029.1| porphobilinogen deaminase [Clostridium botulinum E3 str. Alaska E43] gi|254800242|sp|B2UXC4|HEM3_CLOBA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|188499497|gb|ACD52633.1| porphobilinogen deaminase [Clostridium botulinum E3 str. Alaska E43] Length = 290 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 106/292 (36%), Positives = 159/292 (54%), Gaps = 6/292 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LA S L I ++I+ T+GDR + +L +IGGKGLF Sbjct: 4 LIIATRKSKLAQVQTEIIMSELKSKFNIDSKKLLIV---TEGDRKLDVSLNKIGGKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE L++ E AVHS KD+P ++ +I+A REDIRDVFIS+ S KD+ + Sbjct: 61 KDIELALLNKEAHAAVHSMKDVPFEVSSEFEITAITGREDIRDVFISNGDISFKDIKKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS+RR A L RSD+ ++ RG ++TRL K+ I+LA AG+KRL E +I Sbjct: 121 KVGTSSIRRAAQLKLLRSDLEIVPIRGNVQTRLKKMEEQNLDGIVLAAAGLKRLGDENLI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++F P+ QGA+ IE + A + + + + +V ER+F+ EL G C Sbjct: 181 TDYFDPKEFLPAVSQGALGIECL-KDGDANKYFEALIDAEATLTVEAERSFMKELQGDCH 239 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 S I ++ +G LY G + GKI + G + + I +G+ AQ I Sbjct: 240 SLIGAYSEIQGDDLYMIG-IYDIGGKIVKKD-ILGCKTNNIELGKKLAQKIL 289 >gi|251778553|ref|ZP_04821473.1| hydroxymethylbilane synthase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082868|gb|EES48758.1| hydroxymethylbilane synthase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 290 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 106/292 (36%), Positives = 159/292 (54%), Gaps = 6/292 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LA S L I ++I+ T+GDR + +L +IGGKGLF Sbjct: 4 LIIATRKSKLAQVQTEIIMSELKSKFNIDSKKLLIV---TEGDRKLDVSLNKIGGKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE L++ E AVHS KD+P ++ +I+A REDIRDVFIS+ S KD+ + Sbjct: 61 KDIELALLNKEAHAAVHSMKDVPFEVSSEFEITAITGREDIRDVFISNGDISFKDIKKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS+RR A L RSD+ ++ RG ++TRL K+ I+LA AG+KRL + +I Sbjct: 121 KVGTSSIRRAAQLKLLRSDLEIVPIRGNVQTRLKKMEEQNLDGIVLAAAGLKRLGDKNLI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++F P+ QGA+ IE + A + + + + +V ER+F+ EL G C Sbjct: 181 TDYFDPKEFLPAVSQGALGIECL-KDGDANKYFEALIDAEATLTVEAERSFMKELQGDCH 239 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 S I ++ KG LY G + GKI + G + + I +G+ AQ I Sbjct: 240 SLIGAYSEIKGDDLYMIG-IYDIGGKIVKKD-ILGCKTNNIELGKKLAQKIL 289 >gi|67515679|ref|XP_657725.1| hypothetical protein AN0121.2 [Aspergillus nidulans FGSC A4] gi|40746143|gb|EAA65299.1| hypothetical protein AN0121.2 [Aspergillus nidulans FGSC A4] Length = 350 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 95/322 (29%), Positives = 147/322 (45%), Gaps = 20/322 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K F IGTR S LAL ++L + + P + I T GD+ T L + K Sbjct: 14 SQKIFTIGTRKSKLALLQTDLVLAALKE--RFPDYTFKIHSRETAGDQNTTIALRDFTTK 71 Query: 62 GLFTEEIEKKLISGEIDCAVHSAK---DMPTKLLKGLQISAYLPREDIRDVFISHTAQ-- 116 L+T+E+E L +G +D VHS K +PT L + + RED RD + Sbjct: 72 NLWTQELEDLLEAGSVDLIVHSLKGISYVPTLLPTSCTLGPMMKREDSRDGLVIKKGLPN 131 Query: 117 -SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAY 173 SL ++ SV+GTSS+RR A L R + V+D RG I TRL KL+ ++LA Sbjct: 132 MSLAEMPAGSVVGTSSIRRTAQLARKYPHLKVMDVRGNIGTRLAKLDAEDSPYTCLILAA 191 Query: 174 AGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 AG+ RL I + L+ + + GQGA+ IE + ++++ I H++T + Sbjct: 192 AGLLRLGLGDRIYQYLDSRNAGMLYAVGQGALGIEIRKGDKAMEDILNTIGHKETTFACL 251 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNG---NRC 283 ER+ L L+G C + + T L +V++ DG EV +G + Sbjct: 252 AERSLLRTLEGGCSAPLGVETEWIQDTNGSSKLRMRSVVVSVDGSEHAEVEIDGTVDSPQ 311 Query: 284 DAINIGRDAAQYIRFISNKNVF 305 A G A+ + + Sbjct: 312 SAEEFGVTVAKALVNEGAGKIL 333 >gi|183980868|ref|YP_001849159.1| porphobilinogen deaminase HemC [Mycobacterium marinum M] gi|238054421|sp|B2HRJ2|HEM3_MYCMM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|183174194|gb|ACC39304.1| porphobilinogen deaminase HemC [Mycobacterium marinum M] Length = 314 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 96/308 (31%), Positives = 145/308 (47%), Gaps = 15/308 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H ++ +ST GDR + E G G+FT Sbjct: 2 IRIGTRGSLLATTQAATVRDALIAN----GHAAELVTISTLGDR--SSAPIETLGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + G +D AVHS KD+PT I+A PR+D RD ++ L +L + S Sbjct: 56 TALREAIEDGRVDAAVHSHKDLPTAQDPRFTIAAIPPRQDPRDAVVARDGLVLGELPVGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLN+++N AI++A AG+ RL + + Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSNGDLDAIVVARAGLARLGRLDDV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ IE + + ++ ++ DT +V ERA LAEL+ C Sbjct: 176 TETLEPVQMLPAPAQGALAIECRAGDSRLATVLAELDDADTRAAVTAERALLAELEAGCS 235 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V A DG S G A +G A + Sbjct: 236 APVGAIAEVVESIDEEGRVFEELSLRGCVAALDGSDVIRASGIGTSGRARELGLAVAAEL 295 Query: 297 RFISNKNV 304 + + + Sbjct: 296 FELGAREL 303 >gi|220928704|ref|YP_002505613.1| porphobilinogen deaminase [Clostridium cellulolyticum H10] gi|254800245|sp|B8I0Q8|HEM3_CLOCE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|219999032|gb|ACL75633.1| porphobilinogen deaminase [Clostridium cellulolyticum H10] Length = 293 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 88/293 (30%), Positives = 153/293 (52%), Gaps = 7/293 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIG+R S LA+ + +++ + P + +I + T GD+I ++TL +IGGKGL Sbjct: 2 KKIRIGSRDSKLAIIQSEMVMAAIREF--DPDIELELITMKTTGDKILDKTLDKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E++ L + E+D VHS KDMP + L + A RED RD F+ + ++ Sbjct: 60 FVKELDYALYNNEVDITVHSYKDMPLEDNPKLPVVALSKREDPRDAFVLPQGEIAEN--- 116 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IG+SS RR+ L + RG ++TRL KL++ + AI+LA AGIKRL E Sbjct: 117 NEPIGSSSQRRQLQLKALFPNRKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLES 176 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I ++++ P+ QG I ++ + + +K+ + E++ ER F+ E++G Sbjct: 177 RISRYFSVDEILPAASQGIIAVQGRAG--ENFDFLKLFHSEESLCISQAERTFVREMNGG 234 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C + IA +A S + G+ + +G+R + + +G + + + Sbjct: 235 CSTPIAAYATIVESEIILKGLYHNEATGESKKECVSGSRQNPVELGYELVKKM 287 >gi|187933878|ref|YP_001887094.1| porphobilinogen deaminase [Clostridium botulinum B str. Eklund 17B] gi|254800243|sp|B2TPD7|HEM3_CLOBB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|187722031|gb|ACD23252.1| hydroxymethylbilane synthase [Clostridium botulinum B str. Eklund 17B] Length = 290 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 105/292 (35%), Positives = 158/292 (54%), Gaps = 6/292 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LA L I ++I+ T+GDR + +L +IGGKGLF Sbjct: 4 LIIATRKSKLAQVQTEIIMGKLKSKFNIDSKKLLIV---TEGDRKLDVSLNKIGGKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE L++ E AVHS KD+P ++ +I+A REDIRDVFIS+ S KD+ + Sbjct: 61 KDIELALLNKEAHAAVHSMKDVPFEVSSEFEITAITGREDIRDVFISNGDISFKDIKKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS+RR A L RSD+ ++ RG ++TRL K+ I+LA AG+KRL E +I Sbjct: 121 KVGTSSIRRAAQLKLLRSDLEIVPIRGNVQTRLKKMEEQNLDGIVLAAAGLKRLGDENLI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++F P+ QGA+ IE + A + + + + +V ER+F+ EL G C Sbjct: 181 TDYFDPKEFLPAVSQGALGIECL-KDGDANKYFEALIDAEATLTVEAERSFMKELQGDCH 239 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 S I ++ +G LY G + GKI + G + + I +G+ AQ I Sbjct: 240 SLIGAYSEIQGDDLYMIG-IYDIGGKIVKKD-ILGCKTNNIELGKKLAQKIL 289 >gi|87200799|ref|YP_498056.1| porphobilinogen deaminase [Novosphingobium aromaticivorans DSM 12444] gi|87136480|gb|ABD27222.1| porphobilinogen deaminase [Novosphingobium aromaticivorans DSM 12444] Length = 312 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 107/302 (35%), Positives = 160/302 (52%), Gaps = 4/302 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++P ++GTR SPLA+A A E R+ L H + ++P++ GD+I +R L +IGGK Sbjct: 7 QRPLKLGTRRSPLAMAQAEEARARLCAAHGWAESQVELVPVTASGDKIQDRPLADIGGKA 66 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 L+T+E++ L+SGEID AVHS KD+ T + I+A LPR D+RDV I A S+ + Sbjct: 67 LWTKELDAWLVSGEIDFAVHSMKDVETIRPENFAIAAVLPRADVRDVLIG--AASIHAIP 124 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTS+ RR A +L R D++V+ FRG + TRL KL +A LLA AG+ RL + Sbjct: 125 PGARVGTSAPRRAAQMLHARPDLTVVSFRGNVATRLAKLQAGEADVTLLAAAGLGRLGET 184 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V L+ ++ P+P QGAI IE + + I+ + T ++ ERA L L G Sbjct: 185 GVG-HPLSEYEWLPAPAQGAIGIECLASRADLCAWLGAIDDKPTHHAIRAERALLLALGG 243 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 +C S IA S+L + + DG E D A + + Sbjct: 244 NCHSPIAVLTTHHESSLTLRAALFSPDGAERVEAHETFAAGDDAGPAH-LAHRLLGEAPD 302 Query: 303 NV 304 + Sbjct: 303 AI 304 >gi|158320361|ref|YP_001512868.1| porphobilinogen deaminase [Alkaliphilus oremlandii OhILAs] gi|167008809|sp|A8MGE4|HEM3_ALKOO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|158140560|gb|ABW18872.1| porphobilinogen deaminase [Alkaliphilus oremlandii OhILAs] Length = 296 Score = 296 bits (759), Expect = 3e-78, Method: Composition-based stats. Identities = 92/293 (31%), Positives = 145/293 (49%), Gaps = 7/293 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+G+R S LA+ + ++ P I ++ + T GD ++TL +IGGKGLF Sbjct: 2 KIRVGSRESKLAVKQSEIVIEAIRKY--DPNIEIELVTMKTTGDIKLDQTLDKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+++ L +D VHS KDMP + + L I A RED RDV + +++K+ Sbjct: 60 IKELDQALYDDRVDITVHSFKDMPMAIDEYLPIVAVSKREDPRDVLVLP--KTVKEPDFS 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IG SS RRK L SV RG + TRL KL+ + AI LA AG+KRL E+ Sbjct: 118 KPIGCSSFRRKIQLQEIYPHCSVEPIRGNVLTRLEKLDRGEFSAITLALAGLKRLGLEER 177 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I I + + P+ QG I ++ + + ++ WD ER+F+ L+G C Sbjct: 178 ISRIFEVTEILPAACQGVIVVQARKGFD--VSFLSDFHDKEAWDISMAERSFVRTLNGGC 235 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 S +A + K + L G+ + S + H+ + G R +G + A ++ Sbjct: 236 SSPVAAYGEIKDNYLTLTGLYVDSSNSV-HKKTITGARKQGEEMGFNLALQMK 287 >gi|320587748|gb|EFX00223.1| porphobilinogen deaminase [Grosmannia clavigera kw1407] Length = 342 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 99/327 (30%), Positives = 150/327 (45%), Gaps = 25/327 (7%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +GTR S LAL A ++L + P V+ T GDR L +G K Sbjct: 3 SQAIIHVGTRSSALALKQAELVVAALEKAN--PHVKFVVDARETAGDRDKVTPLPNLG-K 59 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118 GL+T E E +L+ G++D VHSAKDMPT L G + A RED RD I + L Sbjct: 60 GLWTTEFETRLVDGDLDLVVHSAKDMPTTLPVGCLLGAIPKREDPRDAVIFPPGSAYKVL 119 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN---------KAHAI 169 DL + S++GTSS+RR A L R + D RG I+TRL KL+ + I Sbjct: 120 ADLPVGSIVGTSSVRRSAQLRRRFPGLEFRDLRGNIDTRLRKLDAPVPGPDGTTVRYDCI 179 Query: 170 LLAYAGIKRLKKEKVIKEILNIEDF--PPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227 +LA AG+ R+ I ++L+ + GQGA+ +E + K L++ I + T Sbjct: 180 ILAAAGLIRMGFNDRISQLLDSASSGTLYAVGQGAMAVEIRNGDAKTLALLEPIIDKPTM 239 Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNG-- 280 + ERA + L+G C I + + T L +++ DGKI + Sbjct: 240 LACLAERAVMRALEGGCSVPIGVESAWEAETAASPRLKLQATIVSLDGKIGIDAELTAMV 299 Query: 281 -NRCDAINIGRDAAQYIRFISNKNVFN 306 +A +G A+ + + + + Sbjct: 300 TTPQEADALGLKVAEDMIGSGAQKILD 326 >gi|145294537|ref|YP_001137358.1| porphobilinogen deaminase [Corynebacterium glutamicum R] gi|158513580|sp|A4QB59|HEM3_CORGB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|23507698|gb|AAN38291.1| porphobilinogen deaminase [Corynebacterium glutamicum] gi|140844457|dbj|BAF53456.1| hypothetical protein [Corynebacterium glutamicum R] Length = 302 Score = 296 bits (758), Expect = 4e-78, Method: Composition-based stats. Identities = 89/305 (29%), Positives = 141/305 (46%), Gaps = 10/305 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IGTR S LA A R L + + ++T GD N + E G G+F Sbjct: 2 TLKIGTRGSKLATTQAGTIRDQLK----YFGRDAELHIVTTPGDV--NMSPVERIGVGVF 55 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+ + L +GE D AVHS KD+PT R D R+ I+ +L +L Sbjct: 56 TQALRDVLHAGECDVAVHSMKDLPTAADP-RFHLVVPTRADSREALIARDGLTLAELPEG 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTS+ RR + L R D+ ++ RG I+TR+ K+ + + A++LAYAG+ R+ + Sbjct: 115 AKVGTSAPRRISQLKAIRPDLEILPLRGNIDTRMGKVTSGELDAVMLAYAGLTRVGMQDR 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E+ + + P+P QGA+ IE ++ + + ++ H DT+ S ER L L+ C Sbjct: 175 ATEVFDADIIMPAPAQGALAIECRADDTETVRALNMLMHADTFVSAVAERTVLNRLEAGC 234 Query: 245 KSAIAGFAYCK---GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 + +A A G T+ V A DG S G+ +G AQ + Sbjct: 235 TAPVAAHATLDGYSGDTMTLTAGVYALDGSDQLVFSAEGDGARPEELGELVAQQLIDAGA 294 Query: 302 KNVFN 306 N+ Sbjct: 295 ANLLG 299 >gi|325967722|ref|YP_004243914.1| porphobilinogen deaminase [Vulcanisaeta moutnovskia 768-28] gi|323706925|gb|ADY00412.1| porphobilinogen deaminase [Vulcanisaeta moutnovskia 768-28] Length = 305 Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 93/301 (30%), Positives = 145/301 (48%), Gaps = 8/301 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR S L+L + L V P +I + T GD + ++ L IG KG+F Sbjct: 2 KIRIATRGSRLSLIQSDIVMRMLRRVE--PNIQFEVIIIRTTGDLVQDKPLYAIGTKGIF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ--SLKDLA 122 +E+ L+ E D AVHS KD+P+++ GL I+ + PR+ DV + L L Sbjct: 60 EKEVNLALLKDEADIAVHSLKDLPSEISPGLVIAGFSPRDPPFDVLVVRNDYPSDLMALP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--- 179 + +GTSS+RR+A LL R DIS+ RG ++TR+NKL A+++A AG+ RL Sbjct: 120 SGAKVGTSSVRRRAFLLSVRKDISINVIRGNVDTRINKLIRGDYDAVVIAEAGLVRLIND 179 Query: 180 -KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 K + + ++ PP+PGQG I + T + +L++ + ERAFL Sbjct: 180 MKSLHIRYARIPLDLLPPAPGQGIIAVVTREKDTNLIDLLRKASDPKAMVEALAERAFLR 239 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 + G C + G A G+ + F + +G V + D +G +AA + Sbjct: 240 TVGGGCHVPVGGIAIYDGNYMEFIAGIADINGNRKVIVKIRDSSIDPERLGINAAHELLR 299 Query: 299 I 299 Sbjct: 300 Q 300 >gi|257791816|ref|YP_003182422.1| porphobilinogen deaminase [Eggerthella lenta DSM 2243] gi|257475713|gb|ACV56033.1| porphobilinogen deaminase [Eggerthella lenta DSM 2243] Length = 327 Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 94/314 (29%), Positives = 149/314 (47%), Gaps = 15/314 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A L P ++ + + TKGDRI L++IG KGLFT Sbjct: 4 MRIGTRGSKLALWQAHHVADLLRAA--SPGMDVSVEVVKTKGDRILGVALSKIGDKGLFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L G +D VHS KD+PT L +GL ++ L R D RDV ++ + + L S Sbjct: 62 KELEQALFDGRVDVCVHSMKDVPTALPEGLALAGCLIRADARDVLVAASGTTFAGLPAGS 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT +LRR + L R D+ ++ RG ++TR+ K+ + A++LA AGI+R+ + Sbjct: 122 RVGTGALRRLSQLRAVRDDLDYVEVRGNLDTRIAKVRDGALDAVVLAAAGIERMGWSAEV 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E +++ P+ GQGAI +E ++ + + T V ER + LDG C+ Sbjct: 182 AEAFSVDTVVPAVGQGAIGLEVRADDERTARACAQVRCAATDACVAAERHVMRALDGGCQ 241 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHE-------------VSRNGNRCDAINIGRDA 292 I +A + L V + DG + +A + + A Sbjct: 242 VPIGAYARYEEGLLVLDAFVGSLDGSHVLRSRLSAASQPPNDTDAVEAAVREARALAQRA 301 Query: 293 AQYIRFISNKNVFN 306 + + V + Sbjct: 302 VEEFEAQGARAVLD 315 >gi|310780153|ref|YP_003968485.1| hydroxymethylbilane synthase [Ilyobacter polytropus DSM 2926] gi|309749476|gb|ADO84137.1| hydroxymethylbilane synthase [Ilyobacter polytropus DSM 2926] Length = 303 Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 153/305 (50%), Gaps = 6/305 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEI 58 M+K IGTR S LA+A + RS L + K P I + T GD N ++ Sbjct: 2 MKKNKVVIGTRGSLLAVAQSKHVRSMLKE--KYPEIEFEIKEIVTTGDVDLRTNWNNSDT 59 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 K LFT+EIEK+L+ G I AVHS KDMP + GL + RED RDV +S + L Sbjct: 60 SLKSLFTKEIEKELLDGTIHLAVHSMKDMPAESPAGLICGSIPEREDYRDVVVSKSNLKL 119 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L SV+GTSSLRR + R D+ + RG I TRL KL AI+LA AG+KR Sbjct: 120 SELPEGSVVGTSSLRRTMAVKEMRPDLVIEPIRGNIHTRLRKLKEENFDAIVLAAAGLKR 179 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E I + L + P+P QGA+CI+ ++ +E++ I ++ + V ER F Sbjct: 180 VGLENEITQYLETHEMMPAPAQGALCIQCKEDDLFIREILSSITEKEVEEVVEIEREFSR 239 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 DG C + + A G + G+ ++ ++ G R + ++ + A IR Sbjct: 240 IFDGGCHTPMGCSAEIIGDEICLKGMYCHE--EVVYKGEVTGKREEGKSLAQKLAGIIRG 297 Query: 299 ISNKN 303 ++ Sbjct: 298 QIDEQ 302 >gi|262201010|ref|YP_003272218.1| porphobilinogen deaminase [Gordonia bronchialis DSM 43247] gi|262084357|gb|ACY20325.1| porphobilinogen deaminase [Gordonia bronchialis DSM 43247] Length = 313 Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 95/310 (30%), Positives = 146/310 (47%), Gaps = 15/310 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA A +L + H ++ + T GD + + EIG G+F Sbjct: 8 PIRIGTRGSLLATTQAQTIADALTEA----GHPAELVIIRTAGD-DSAAPVAEIG-VGVF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T I L + E+D AVHS KD+PT GL I+A PRED RD +S L +L Sbjct: 62 TTAIRIALHNREVDVAVHSYKDLPTADEPGLYIAAVPPREDPRDALVSRDNMVLGELPPG 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S IGTS+ RR A L + + RG +++RL K+ + + A+++A AG+ R+ + Sbjct: 122 STIGTSAPRRVAQLRALGLGLEIRPLRGNLDSRLGKVASGELDAVVVARAGLVRIGRADE 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E + P+P QGA+ +E ++ + ++ ++ E T +++ ERA LA L+ C Sbjct: 182 VTESFDPVVLLPAPAQGALAVECRSDDAQLVRILAELDDESTRAAIDAERAVLAALEAGC 241 Query: 245 KSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 + I A S L V A DG S G A +G D A Sbjct: 242 TAPIGAIAEVVESIDDDGRIFAELSLRAAVAAEDGSDVIRASVVGPVDRAAQLGADLAAE 301 Query: 296 IRFISNKNVF 305 + + ++ Sbjct: 302 LLELGAGDLV 311 >gi|118619687|ref|YP_908019.1| porphobilinogen deaminase [Mycobacterium ulcerans Agy99] gi|158512390|sp|A0PW29|HEM3_MYCUA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|118571797|gb|ABL06548.1| porphobilinogen deaminase HemC [Mycobacterium ulcerans Agy99] Length = 314 Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 95/308 (30%), Positives = 144/308 (46%), Gaps = 15/308 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H ++ +ST GDR + E G G+FT Sbjct: 2 IRIGTRGSLLATTQAAIVRDALIAN----GHAAELVTISTLGDR--SSAPIETLGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + G +D AVHS KD+PT I+A PR+D RD ++ L +L + S Sbjct: 56 TALREAIEDGRVDAAVHSHKDLPTAQDPRFTIAAIPPRQDPRDAVVARDGLVLGELPVGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A + + RG ++TRLN+++N AI++A AG+ RL + + Sbjct: 116 LVGTSSPRRAAQFRALGLGLEIRPLRGNLDTRLNRVSNGDLDAIVVARAGLARLGRLDDV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ IE + + ++ ++ DT +V ERA LAEL+ C Sbjct: 176 TETLEPVQMLPAPAQGALAIECRAGDSRLATVLAELDDADTRAAVTAERALLAELEAGCS 235 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V A DG S G A +G A + Sbjct: 236 APVGAIAEVVESIDEEGRVFEELSLRGCVAALDGSDVIRASGIGTSGRARELGLAVAAEL 295 Query: 297 RFISNKNV 304 + + + Sbjct: 296 FELGAREL 303 >gi|294630701|ref|ZP_06709261.1| porphobilinogen deaminase [Streptomyces sp. e14] gi|292834034|gb|EFF92383.1| porphobilinogen deaminase [Streptomyces sp. e14] Length = 326 Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 90/324 (27%), Positives = 152/324 (46%), Gaps = 29/324 (8%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA+A + + ++ V P + ++ ++T GD + L +IGG G+F Sbjct: 1 MRLGTRRSKLAMAQSGQVADAVSQVTGRP---VELVEITTYGDT-SREHLAQIGGTGVFV 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + L GE+D AVHS KD+PT L ++A RED RDV ++ A DL + Sbjct: 57 AALREALARGEVDFAVHSLKDLPTAQPAELVLAAIPEREDPRDVLVARDALKFADLPRGA 116 Query: 126 VIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +GT S RR A L DI + RG ++TR+ ++ + A++LA AG+ R+ + Sbjct: 117 RVGTGSPRRMAQLNAYARAHGLDIETVPIRGNVDTRIGFVHGGELDAVVLAAAGLNRIGR 176 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + L+++ P+PGQGA+ IE + + ++ T +V ER+ LA L+ Sbjct: 177 GDEVTDFLSVDTVLPAPGQGALAIECAADRADLVAALAELDDPHTRAAVTAERSLLAALE 236 Query: 242 GSCKSAIAGFAYCKG-----------------STLYFYGIVLASDGKIFHEVSRNGNR-- 282 C + + A + G+V +DG ++S G Sbjct: 237 AGCSAPVGALADLPPLSAPLERAEPQADRQIVKEMRLRGVVGTTDGSTLVQLSTTGPVPR 296 Query: 283 --CDAINIGRDAAQYIRFISNKNV 304 DA+ +GR+ A + + Sbjct: 297 THDDAMALGRELATEMLARGAAGL 320 >gi|88802327|ref|ZP_01117854.1| porphobilinogen deaminase HemC [Polaribacter irgensii 23-P] gi|88781185|gb|EAR12363.1| porphobilinogen deaminase HemC [Polaribacter irgensii 23-P] Length = 531 Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 97/304 (31%), Positives = 147/304 (48%), Gaps = 10/304 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K RIGTR S LAL A + R L + + V++P+ + GD + L E+G G Sbjct: 2 QKIIRIGTRDSQLALWQANKVRKELAGL----GYESVLVPIKSSGDINLDTPLYEMGITG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT+ ++ L+ G+ID AVHS KD+PT L KG+ +A L R + DV + + + Sbjct: 58 IFTKSLDIALLEGKIDIAVHSLKDVPTALPKGIVQAAVLKRGNYNDVLVLNGTEEFFGEE 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKRLKK 181 +I T SLRRKA+ L V RG ++TRL KL +K + + A AG++RL Sbjct: 118 QG-LIATGSLRRKAMWLDRYPTHKVAPLRGNVQTRLEKLETSKTWNGAVFAAAGLERLGI 176 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +++ P+P QGAI I + + + INH +T V ER FL L+ Sbjct: 177 TPEDT--VDLPWMLPAPAQGAIMIAALEKDDFTLDACEQINHHETSVCVGVEREFLRLLE 234 Query: 242 GSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G C + I AY + F ++L DG V++ + +D A Y+ Sbjct: 235 GGCTAPIGALAYVDARTDEVNFKAVLLKKDGSKKIRVAKTAKFGSHKFLAKDCADYVINR 294 Query: 300 SNKN 303 K Sbjct: 295 GGKE 298 >gi|291528492|emb|CBK94078.1| porphobilinogen deaminase [Eubacterium rectale M104/1] Length = 338 Score = 295 bits (756), Expect = 6e-78, Method: Composition-based stats. Identities = 97/309 (31%), Positives = 141/309 (45%), Gaps = 41/309 (13%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LAL L + P + + + T GD + L +IG KG+F +E Sbjct: 5 IGTRGSKLALVQTDYVIDKLKRAY--PDDDFKAVIIKTTGDLEQKKALDKIGSKGIFVKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE +L+SG+I AVHS KDMP + GL + RED RDV + A SL +L +VI Sbjct: 63 IEDELLSGKIHMAVHSMKDMPDEPAAGLTFAKAWKREDPRDVLVLKNAASLDELPHGAVI 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK---------------------- 165 GT S RRK LL+ R D+ V+ RG I+TRL KL + + Sbjct: 123 GTGSKRRKYQLLKLRPDLKVVGIRGNIDTRLRKLYDGEIIYEEIADNTVNNNEIANEKQN 182 Query: 166 ------AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219 I+LA AGIKR+ ++ I + + +D P+P QG + +E +N + + Sbjct: 183 KYNEYRLDGIVLAAAGIKRIGRDSEITQYFSEDDMIPAPAQGTLALELRADNAELMAKLD 242 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-----------KGSTLYFYGIVLAS 268 ++ E T ER FL + G+C +A + K + L + + Sbjct: 243 ALSDEKTNLCAGIEREFLKRIGGNCHLPVAAYCDIVSEKDCGNDSDKNNRLKLLAMFGSE 302 Query: 269 DGKIFHEVS 277 DGK Sbjct: 303 DGKKLARTE 311 >gi|291525403|emb|CBK90990.1| porphobilinogen deaminase [Eubacterium rectale DSM 17629] Length = 338 Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 98/309 (31%), Positives = 142/309 (45%), Gaps = 41/309 (13%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LAL L + P + + + T GD + L +IG KG+F +E Sbjct: 5 IGTRGSKLALVQTDYVIDKLKRAY--PDDDFKAVIIKTTGDLEQKKALDKIGSKGIFVKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE +L+SG+I AVHS KDMP + GL + RED RDV + A SL +L +VI Sbjct: 63 IEDELLSGKIHMAVHSMKDMPDEPAAGLTFAKAWKREDPRDVLVLKNAASLDELPHGAVI 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK---------------------- 165 GT S RRK LL+ R D+ V+ RG I+TRL KL + + Sbjct: 123 GTGSKRRKYQLLKLRPDLKVVGIRGNIDTRLRKLYDGEIIYEEVADNTVNNNEIANEKQN 182 Query: 166 ------AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219 I+LA AGIKR+ ++ I + + +D P+P QG + +E +N K + Sbjct: 183 KYNEYRLDGIVLAAAGIKRIGRDSEITQYFSEDDMIPAPAQGTLALELRADNAKLMAKLD 242 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-----------KGSTLYFYGIVLAS 268 ++ E T ER FL ++ G+C +A + K + L + + Sbjct: 243 ALSDEKTNLCAGIEREFLKQIGGNCHLPVAAYCDIVSEKDRGNDSNKNNRLKLLAMFGSE 302 Query: 269 DGKIFHEVS 277 DGK Sbjct: 303 DGKQLARTE 311 >gi|120401860|ref|YP_951689.1| porphobilinogen deaminase [Mycobacterium vanbaalenii PYR-1] gi|158513128|sp|A1T3D3|HEM3_MYCVP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|119954678|gb|ABM11683.1| hydroxymethylbilane synthase [Mycobacterium vanbaalenii PYR-1] Length = 312 Score = 295 bits (755), Expect = 7e-78, Method: Composition-based stats. Identities = 91/310 (29%), Positives = 149/310 (48%), Gaps = 14/310 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H+ ++ +ST+GD+ + + EIG G+FT Sbjct: 2 IRIGTRGSLLATTQAGTVRDALIAA----GHDAELVIVSTEGDQRADAPIAEIG-VGVFT 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + G +D AVHS KD+PT I+A RED RD ++ L +L S Sbjct: 57 AALREAIADGLVDAAVHSYKDLPTAPDPRFMIAATPVREDARDALVARDGLVLGELPAGS 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS RR A L + + RG ++TRLN++++ + AI++A AG+ R+ + + Sbjct: 117 VIGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGELDAIVVARAGLARIGRLDAV 176 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ +E + +++ ++ DT ++ ER LAEL+ C Sbjct: 177 TEALEPVQMLPAPAQGALAVECRAGDTALAQVLSQLDDADTRAAITAERTLLAELEAGCS 236 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V DG + G A +G A+ + Sbjct: 237 APVGAIAEVVESIDEDGRVFEELSLRGCVATLDGSDVIRATGIGTPDRARELGLSVAEEL 296 Query: 297 RFISNKNVFN 306 + +++ + Sbjct: 297 FELGARDLLD 306 >gi|302541659|ref|ZP_07294001.1| hydroxymethylbilane synthase [Streptomyces hygroscopicus ATCC 53653] gi|302459277|gb|EFL22370.1| hydroxymethylbilane synthase [Streptomyces himastatinicus ATCC 53653] Length = 311 Score = 295 bits (755), Expect = 7e-78, Method: Composition-based stats. Identities = 97/304 (31%), Positives = 147/304 (48%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L + P ++P++T GDR L+++GGKG FT Sbjct: 7 IRIVSRSSPMALAQVERVRTELAALR--PGIRTEVVPVTTSGDRWMGD-LSKLGGKGAFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +AYL R+DIRD I +L + Sbjct: 64 KEVDAALLAGEADLAVHCIKDVPADRPLPAGTVFAAYLKRDDIRDAVIHPEGLTLDQMPE 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSS+RR A L + + RG RL K+ A++LA +G++R+ + Sbjct: 124 GTRIGTSSVRRVAQLAVTHPHVECVPMRGNANRRLEKMAAGDCDALMLAVSGLERIDRTD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI EIL +E P G G + ++ ++ E V + + W + ER L L G Sbjct: 184 VISEILPVETMCPPIGAGVLGLQCREDDTTTIEAVAGLGDTEVWKEITAERMLLHVLQGH 243 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG+A + L V + DGK + D +G A + + Sbjct: 244 CNSPIAGYAKAERDGRLSLRARVFSPDGKTVLDAHEWAGPLDPATLGTSVAVALLRQGAR 303 Query: 303 NVFN 306 V + Sbjct: 304 EVID 307 >gi|326336014|ref|ZP_08202190.1| hydroxymethylbilane synthase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691811|gb|EGD33774.1| hydroxymethylbilane synthase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 308 Score = 295 bits (755), Expect = 8e-78, Method: Composition-based stats. Identities = 100/302 (33%), Positives = 151/302 (50%), Gaps = 7/302 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK RIGTR S LAL A + +S L + + ++P+ ++GD + L +G G Sbjct: 2 KKTLRIGTRDSELALWQARKVQSLLEAL----GYPTTLVPVKSQGDLTLDIPLYTMGITG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT+ ++ ++ G ID AVHS KD+PT L KG+ A L R +++DV + Sbjct: 58 VFTKVLDVAMLQGVIDIAVHSMKDVPTTLPKGIIKGAILKRANVQDVLVYKENLDFLS-H 116 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 H+ I T SLRRKA LR V + RG I TRL KL+ + + A A ++RL K+ Sbjct: 117 THATIATGSLRRKAQWLRRFPTHLVENLRGNINTRLEKLHKSPWQGAIFAAAALERLDKK 176 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +V ++ P+P QGAI + + + +E + +IN + T N ER FL L+G Sbjct: 177 EVNA--FPLDWMTPAPAQGAIMVVSKAEDTYTKEALALINDQPTDIETNIERRFLKRLEG 234 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C + I A G T+ F G + + DGK EV + + D N A I Sbjct: 235 GCTAPIGAKATLDGKTISFVGNLFSLDGKHAIEVKKTISLDDIENFPEACADEILLKGGA 294 Query: 303 NV 304 ++ Sbjct: 295 DL 296 >gi|327400408|ref|YP_004341247.1| Porphobilinogen deaminase [Archaeoglobus veneficus SNP6] gi|327315916|gb|AEA46532.1| Porphobilinogen deaminase [Archaeoglobus veneficus SNP6] Length = 296 Score = 294 bits (754), Expect = 8e-78, Method: Composition-based stats. Identities = 108/299 (36%), Positives = 154/299 (51%), Gaps = 12/299 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K +GTR S LALA + + L + + I + T GD + +R L E G Sbjct: 1 MPEK-IVVGTRGSKLALAQTEKVIAHLKA----EGYEVEIRIIKTPGDIMKDRPLHEFKG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G F I++ L+ G+ID AVHS KD+P+K+ I+A L RE D F++ ++ + Sbjct: 56 MGAFVRVIDEALVDGDIDIAVHSYKDVPSKI--NGVIAAVLERESPCDAFVTREGLTIDE 113 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +SV+GTSSLRR+A + R+R D+ + + RG ++TRL KL + AILLA AG+ RL Sbjct: 114 LESYSVVGTSSLRRRAQIKRYRPDLKIENLRGNVDTRLRKLREKQYDAILLAEAGLIRLG 173 Query: 181 K-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 EKV + LN E F PS QG I +ET LV +NH+ T ERA L E Sbjct: 174 LNEKVRYQSLNPEIFVPSANQGIIAVETRKGEED---LVSFMNHKRTAVEAEVERAVLKE 230 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L C + +A G + Y VL+ DG V + AI A+ ++ Sbjct: 231 LGVGCAVPVGIYAKFDG-KIRLYCEVLSHDGSRAVRVEETLSPKTAIEEAIIIARELKK 288 >gi|149369456|ref|ZP_01889308.1| porphobilinogen deaminase [unidentified eubacterium SCB49] gi|149356883|gb|EDM45438.1| porphobilinogen deaminase [unidentified eubacterium SCB49] Length = 313 Score = 294 bits (754), Expect = 9e-78, Method: Composition-based stats. Identities = 97/311 (31%), Positives = 149/311 (47%), Gaps = 18/311 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RIGTR S LAL A + L + + ++P+ + GD + ++ L E+G G Sbjct: 2 NKVIRIGTRDSELALWQANTVKRQLESL----GYKTELLPVKSTGDLVLDKPLYEMGITG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT+ ++ +++G +D AVHS KD+PT L KG+ +A L R DV ++ S D Sbjct: 58 IFTKTLDVAMLNGTVDIAVHSMKDVPTALPKGIIQTAVLERAMTEDVLVT---TSEIDYT 114 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 I T SLRRKA L +V+D RG ++TRL KL +N + A AG+ RL+ Sbjct: 115 KPCTIATGSLRRKAQWLNRYPHHTVVDLRGNVQTRLQKLKDNPWDGAIFAKAGLDRLEYL 174 Query: 183 KVIKEILNIE---------DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 EI + + P+P QGA+ I T N+ + V +N+ E Sbjct: 175 N-NTEITSPDFSGTFENLSWMLPAPAQGAMVIVTLQNDDFTTKAVSKLNNTAADICTQIE 233 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 R FL +L+G C + I A + F G + + DGK EV + ++ + G DAA Sbjct: 234 RDFLRKLEGGCTAPIGALAQVVEENIQFTGCLFSLDGKTKIEVEKTIDKNNNNG-GVDAA 292 Query: 294 QYIRFISNKNV 304 + + Sbjct: 293 IELLENDGAAL 303 >gi|238923292|ref|YP_002936807.1| porphobilinogen deaminase [Eubacterium rectale ATCC 33656] gi|238874966|gb|ACR74673.1| porphobilinogen deaminase [Eubacterium rectale ATCC 33656] Length = 338 Score = 294 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 98/309 (31%), Positives = 142/309 (45%), Gaps = 41/309 (13%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LAL L + P + + + T GD + L +IG KG+F +E Sbjct: 5 IGTRGSKLALVQTDYVIDKLKRAY--PDDDFKAVIIKTTGDLEQKKALDKIGSKGIFVKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE +L+SG+I AVHS KDMP + GL + RED RDV + A SL +L +VI Sbjct: 63 IEDELLSGKIHMAVHSMKDMPDEPAAGLTFAKAWKREDPRDVLVLKNAASLDELPHGAVI 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK---------------------- 165 GT S RRK LL+ R D+ V+ RG I+TRL KL + + Sbjct: 123 GTGSKRRKYQLLKLRPDLKVVGIRGNIDTRLRKLYDGEIIYEEVADNTVNNNEIANEKKN 182 Query: 166 ------AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219 I+LA AGIKR+ ++ I + + +D P+P QG + +E +N K + Sbjct: 183 KYSEYRLDGIVLAAAGIKRIGRDSEITQYFSEDDMIPAPAQGTLALELRADNAKLMAKLD 242 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-----------KGSTLYFYGIVLAS 268 ++ E T ER FL ++ G+C +A + K + L + + Sbjct: 243 ALSDEKTNLCAGIEREFLKQIGGNCHLPVAAYCDIVSEKDRGNDSNKNNRLKLLAMFGSE 302 Query: 269 DGKIFHEVS 277 DGK Sbjct: 303 DGKQLARTE 311 >gi|284039864|ref|YP_003389794.1| porphobilinogen deaminase [Spirosoma linguale DSM 74] gi|283819157|gb|ADB40995.1| porphobilinogen deaminase [Spirosoma linguale DSM 74] Length = 309 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 162/304 (53%), Gaps = 8/304 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+ A ++ L ++ + TKGD + +R+L +IG KG+FT Sbjct: 3 IRIGTRSSRLAVWQAEHIQALLEK----GGLTSELVLIETKGDLVLDRSLAKIGSKGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E +L SG ID AVHSAKD+P+ L L I A+ RE DV +S Sbjct: 59 QELEDQLRSGTIDIAVHSAKDLPSNLPADLHIIAFTEREPANDVLVSRNKSLSLQGGESF 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A+L + ++ +D RG ++TR+ KL+ A+LLAYAG+ R+ + +I Sbjct: 119 RIGTSSTRRVAMLKHYCPQLATVDMRGNLQTRIRKLDEGHCDALLLAYAGVHRMGYDDLI 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVN---NPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 E L +++F P+ GQG+I IE + + A+ + ++INHE T + ERAFLA L+G Sbjct: 179 VERLPLDEFTPAVGQGSIAIEVATDALKSDIAEAITRLINHEPTAACLRAERAFLARLEG 238 Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C A T+ G +++ DG + +G+ ++ +G A+ I Sbjct: 239 GCSIPSFALAQWTDDTTVSLTGGLVSLDGSQLLRETFSGSAQESHLLGHSLAEAILARGG 298 Query: 302 KNVF 305 + Sbjct: 299 DTLL 302 >gi|315223357|ref|ZP_07865216.1| hydroxymethylbilane synthase [Capnocytophaga ochracea F0287] gi|314946688|gb|EFS98677.1| hydroxymethylbilane synthase [Capnocytophaga ochracea F0287] Length = 288 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 96/294 (32%), Positives = 148/294 (50%), Gaps = 8/294 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL A ++ L + + I+ + GD ++ L E+G G+F Sbjct: 3 TIRIGTRDSELALWQAKTVQNQLKTL----GYATEIVSTKSHGDIELSKPLYEMGVTGIF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+ ++ L++ EID AVHS KD+PT L +G+ + A L R + DV + S + A Sbjct: 59 TKALDIALLNSEIDIAVHSMKDVPTALPEGIVVGAVLKRGNPHDVLVYKGDLSFLE-AEI 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 I TSSLRRKA L ++ RG + TRL KL +N + + A AG++R+ K+ Sbjct: 118 VTIATSSLRRKAQWLHRYPHHNIESLRGNVNTRLQKLTDNPWNGAIFAAAGLERIN--KL 175 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ L ++ P+P QGAI + N Q+ + ++ + T+ + ER FL L+G C Sbjct: 176 PEKHLVLDWMLPAPAQGAIVVVVREANVALQKKLLPLHDDYTYIATQLERDFLRALEGGC 235 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 + I FA K LYF G + + DGK + + D G A +R Sbjct: 236 TAPIGAFAEFKDDKLYFKGGLWSEDGKESSVIDEVLTQID-EYTGEKLATMVRS 288 >gi|332531340|ref|ZP_08407248.1| porphobilinogen deaminase [Hylemonella gracilis ATCC 19624] gi|332039204|gb|EGI75622.1| porphobilinogen deaminase [Hylemonella gracilis ATCC 19624] Length = 323 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 108/314 (34%), Positives = 161/314 (51%), Gaps = 25/314 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A + L H + ++ ++T+GD+I +R L+++GGKGLF Sbjct: 5 LTIATRESRLALWQAEHVQGLLRQQ----GHAVTLLGMTTQGDQILDRALSKVGGKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P +L +G ++A L RED RD ++S L DL + Sbjct: 61 KELEVALDEGRADLAVHSLKDVPMELPEGFVLAAVLEREDERDAWVSPHCAGLADLPSGA 120 Query: 126 VIGTSSLRRKALLLRW-----RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 ++GTSSLRR LL R D+ + RG ++TRL KL+ + HAI+LA AG+KRL Sbjct: 121 IVGTSSLRRVVLLREALRALGRDDVRIEPLRGNLDTRLRKLDEGQYHAIVLAAAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVN----NPKAQELVKVINHEDTWDSVNCERAF 236 I++I E+ P+ GQGA+ IE ++ + + H+ TW V ERA Sbjct: 181 LAARIRKIFTPEEMLPAAGQGALGIEIKHGATAQTAALEQALSNLAHQPTWLRVAAERAV 240 Query: 237 LAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFH-----EVSRNGNRCDA 285 + GSC +A A KG+TL G++ E + +G DA Sbjct: 241 SRAMGGSCSMPLAAHAAFVSSPAPKGATLRLRAAWGDVQGRLPLVQAQDEAAVHG-LDDA 299 Query: 286 INIGRDAAQYIRFI 299 +G A+ ++ Sbjct: 300 EALGLRVARQLQEA 313 >gi|239942156|ref|ZP_04694093.1| porphobilinogen deaminase [Streptomyces roseosporus NRRL 15998] gi|239988619|ref|ZP_04709283.1| porphobilinogen deaminase [Streptomyces roseosporus NRRL 11379] gi|291445603|ref|ZP_06584993.1| porphobilinogen deaminase 1 [Streptomyces roseosporus NRRL 15998] gi|291348550|gb|EFE75454.1| porphobilinogen deaminase 1 [Streptomyces roseosporus NRRL 15998] Length = 328 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 90/313 (28%), Positives = 152/313 (48%), Gaps = 17/313 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + ++ +V + ++ ++T GD + L +IGG G+F Sbjct: 14 PLRLGTRRSKLAMAQSGLVAEAVREVT---GRAVELVEITTYGDT-SREHLAQIGGTGVF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L GE+D AVHS KD+PT L ++A RED RD ++ + + L Sbjct: 70 VAALREALARGEVDFAVHSLKDLPTSQPDELVLAAVPQREDPRDALVARDGLTFEQLPDG 129 Query: 125 SVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + IGT S RR A L + + RG ++TR+ + + + A++LA AG+ RL Sbjct: 130 ARIGTGSPRRMAQLNAYARSHGLRIETVPIRGNVDTRIGFVRDGELDAVVLAAAGLSRLG 189 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + + L ++ P+PGQGA+ IE ++ + ++ T +V ERA LA L Sbjct: 190 RTGEVTDFLPVDTVLPAPGQGALAIECAASSADLAAALAELDDPYTRVAVTAERALLAAL 249 Query: 241 DGSCKSAIAGFAY--CKG---STLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGRD 291 + C + + A G + L G+V ++DG ++S G DA +GR+ Sbjct: 250 EAGCSAPVGALADVLVDGHVVNELRLRGVVGSTDGSSLVQLSTTGPVPTSHDDAAALGRE 309 Query: 292 AAQYIRFISNKNV 304 A + + Sbjct: 310 LASEMLAKGAAGL 322 >gi|329764682|ref|ZP_08256278.1| porphobilinogen deaminase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138828|gb|EGG43068.1| porphobilinogen deaminase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 308 Score = 293 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 101/293 (34%), Positives = 156/293 (53%), Gaps = 4/293 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG R S L+LA S L + P + I + TKGD R L I KG+F +E Sbjct: 2 IGARGSQLSLAQTKLVISELKKI--TPDVDFEIKSIKTKGDTDA-RPLFTIDQKGIFEKE 58 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I++ + GE+D AVHS KD+P++L++ L +++ RE + D+FIS +L + +VI Sbjct: 59 IDRAVADGEVDFAVHSLKDVPSQLVENLTLASIPKREMVNDIFISSDGTTLDSIKSGAVI 118 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR + R RSD++V RG IETR+ K+ + I+LA AGI RL V Sbjct: 119 GTSSLRRAVQITRKRSDVTVRPIRGNIETRIKKVTDKIFDGIVLAQAGISRLGI-DVQYT 177 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 L+I+DF PSPGQGA+ I + + ++K I D+ + ER+ +D C+ Sbjct: 178 PLSIQDFSPSPGQGALAIVSRKDESSTISMLKKIEDTDSRLEIEAERSLSDFVDSGCRFP 237 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 I +A G+ + + DGK V ++G++ D ++G+ + + Sbjct: 238 IGAYAKSNGNQMTLSVSAFSVDGKKSLFVEKSGDKNDPFSLGKSVGEELHKKG 290 >gi|223939088|ref|ZP_03630972.1| porphobilinogen deaminase [bacterium Ellin514] gi|223892248|gb|EEF58725.1| porphobilinogen deaminase [bacterium Ellin514] Length = 332 Score = 293 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 106/332 (31%), Positives = 160/332 (48%), Gaps = 40/332 (12%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG- 60 KP I TR S LALA A S P +I + + T GD++ +L + G Sbjct: 5 NNKPIFIATRGSALALAQANAVLSQCRSA--FPKLDIELKIIKTTGDKLQKASLAKEGES 62 Query: 61 --KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 KGLFT+E+E L++G+ D AVHS KD+PT+L GL + A R D+RDV + A+ L Sbjct: 63 LPKGLFTKELEVALLNGDADIAVHSLKDLPTELPTGLILGAVSKRADVRDVLVYRDAEYL 122 Query: 119 ------------------KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK 160 KD + + TSS RRKA LL R D++V++ RG + TRL K Sbjct: 123 RSQPGKSNRRGFTPKLAIKDFPPGATVATSSTRRKAQLLAQRGDLNVVEIRGNVATRLEK 182 Query: 161 LNNN-KAHAILLAYAGIKRLKK--------------EKVIKEILNIEDFPPSPGQGAICI 205 L N + A +LA AG++RL E ++ IL+ + P GQ A+ + Sbjct: 183 LANQPELDATVLAAAGLERLNFKITAEGKLAGEGIPEGLLATILDFDVMLPCVGQAALGM 242 Query: 206 ETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIV 265 E N+ + QE+ +NH +T V ER+FL+ + G C+S +A +A G L Sbjct: 243 EIRENDARIQEICDRLNHPETHACVLAERSFLSGMGGGCQSPVAAYAEIAGDQLQMRAAS 302 Query: 266 LASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + +A+ +G++ A ++ Sbjct: 303 FRE--TSARRAVGGKSINEAVALGQELAAKLK 332 >gi|134103372|ref|YP_001109033.1| porphobilinogen deaminase [Saccharopolyspora erythraea NRRL 2338] gi|291004409|ref|ZP_06562382.1| porphobilinogen deaminase [Saccharopolyspora erythraea NRRL 2338] gi|133915995|emb|CAM06108.1| porphobilinogen deaminase [Saccharopolyspora erythraea NRRL 2338] Length = 315 Score = 293 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 96/312 (30%), Positives = 151/312 (48%), Gaps = 19/312 (6%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RIGTR S LA+A +L + ++ +ST GDR + + EIG G Sbjct: 2 NKTLRIGTRGSALAMAQTSWVAEALEKA----GYRTELVTVSTPGDR-SMAPIAEIG-VG 55 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT + L GE+D AVHS KD+PT L ++A RED RD ++ +L +L Sbjct: 56 VFTSALRDALADGEVDVAVHSYKDLPTAPDPRLSLAAVPVREDPRDALVARDGLTLGELP 115 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SV+GT S RR L + V D RG ++TR+ K+ + + A++LA AG+ R+ + Sbjct: 116 PGSVVGTGSPRRAGQLKALGLGLEVRDIRGNVDTRMRKVTDGELDAVVLARAGLARVGRL 175 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELD 241 I E L+ P+P QGA+ +E V++ + L++ V++ + + +V ERA LA L+ Sbjct: 176 AGITETLDPLQMLPAPAQGALAVECRVDDVDTEHLLQSVLDDQASRVAVAAERAMLAALE 235 Query: 242 GSCKSAIAGFAYCKGS---------TLYFYGIVLASD--GKI-FHEVSRNGNRCDAINIG 289 C + + A L+ G+V D G++ S G A +G Sbjct: 236 AGCSAPVGALAEVVEDLDADGRVAQRLFVRGVVAVDDASGRVDLLRASVTGETTAAEQLG 295 Query: 290 RDAAQYIRFISN 301 R+ A + Sbjct: 296 RELAAQLLDARA 307 >gi|254390668|ref|ZP_05005882.1| porphobilinogen deaminase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294812261|ref|ZP_06770904.1| Porphobilinogen deaminase 2 [Streptomyces clavuligerus ATCC 27064] gi|326440901|ref|ZP_08215635.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064] gi|197704369|gb|EDY50181.1| porphobilinogen deaminase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294324860|gb|EFG06503.1| Porphobilinogen deaminase 2 [Streptomyces clavuligerus ATCC 27064] Length = 311 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 98/308 (31%), Positives = 146/308 (47%), Gaps = 6/308 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E + RI +R SP+ALA R+ L P ++P++T GDR L +GGK Sbjct: 3 ETEVMRIVSRSSPMALAQVERVRAELAVAR--PGVRTEVVPVTTSGDRWMGD-LAALGGK 59 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLK 119 G FT+E++ L++GE D AVH KD+P L G +A+L R+DIRD + +L Sbjct: 60 GAFTKEVDAALLAGEADLAVHCMKDVPADRPLPAGTTFAAFLRRDDIRDALVHPGGLTLD 119 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L + IGTSS+RR A L + + RG RL KL A A+LLA +G++R+ Sbjct: 120 ELPDGTRIGTSSVRRIAQLASSHPQLECVPMRGNANRRLEKLAAGDADALLLAVSGLERI 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + VI E+L+ + P G G + ++ + + + V + T V ER L Sbjct: 180 GRTDVISEVLSADVMCPPIGAGVLALQCREEDEETIDAVSGLGDPATHREVTAERMLLHV 239 Query: 240 LDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L G C S IAG+A + G L V DGK D +G A + Sbjct: 240 LQGHCNSPIAGYARAERGGELSLRAKVFTPDGKRVLNAHEWAGPLDPATLGTSVAVALLR 299 Query: 299 ISNKNVFN 306 + + + Sbjct: 300 QGARELID 307 >gi|182437949|ref|YP_001825668.1| porphobilinogen deaminase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326778585|ref|ZP_08237850.1| Porphobilinogen deaminase [Streptomyces cf. griseus XylebKG-1] gi|178466465|dbj|BAG20985.1| putative porphobilinogen deaminase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326658918|gb|EGE43764.1| Porphobilinogen deaminase [Streptomyces cf. griseus XylebKG-1] Length = 328 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 92/313 (29%), Positives = 151/313 (48%), Gaps = 17/313 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + ++ +V + ++ ++T GD + L +IGG G+F Sbjct: 14 PLRLGTRRSKLAMAQSGLVAEAVREVT---GRAVELVEITTYGDT-SREHLAQIGGTGVF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L+ GE+D AVHS KD+PT L ++A RED RD I+ + L Sbjct: 70 VAALREALVRGEVDFAVHSLKDLPTFQPDDLVLAAVPQREDPRDALIARDGLTFGQLPEG 129 Query: 125 SVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +GT S RR A L + + RG ++TR+ + + + A++LA AG+ RL Sbjct: 130 ARVGTGSPRRMAQLNAYARSHGLRIETVPIRGNVDTRIGFVRDGELDAVVLAAAGLSRLG 189 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + E L ++ P+PGQGA+ IE ++ + ++ T +V ERA LA L Sbjct: 190 RSGEVTEFLPVDTVLPAPGQGALAIECAASSADLAAALAELDDPYTRAAVTAERALLAAL 249 Query: 241 DGSCKSAIAGFAY--CKG---STLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGRD 291 + C + + A G + L G+V +DG ++S G DA IGR+ Sbjct: 250 EAGCSAPVGALADLLVDGQVVNELRLRGVVGTTDGSSLVQLSTTGPVPTSHDDAAAIGRE 309 Query: 292 AAQYIRFISNKNV 304 A + + Sbjct: 310 LAAEMLAKGAAGL 322 >gi|256826210|ref|YP_003150170.1| hydroxymethylbilane synthase [Kytococcus sedentarius DSM 20547] gi|256689603|gb|ACV07405.1| hydroxymethylbilane synthase [Kytococcus sedentarius DSM 20547] Length = 358 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 90/334 (26%), Positives = 150/334 (44%), Gaps = 36/334 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA + +L H + ++ ++T+GD L+ IGG Sbjct: 12 QGRVVRLGTRRSDLATTQSTHVADALRAR----GHEVELVLVTTEGDVNR-APLSRIGGT 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F + L++GEID AVHS KD+P + L I+A RED RD ++ +L+ L Sbjct: 67 GVFVSALRDALLAGEIDIAVHSLKDLPVAQPQELVIAAVPEREDPRDALVARDGLTLETL 126 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GT S RR+A L R D+ V+D RG + RL + + A++LA AG++RL Sbjct: 127 PAGARVGTGSPRREAQLRVARPDLEVVDLRGNVPRRLATVAEGELDAVVLAGAGLRRLGL 186 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + + L + P+PGQGA+ +E ++ ++ +++ ++H T + ERA L L+ Sbjct: 187 TEHVTQWLEPQVMVPAPGQGALAVECRSDDAESIAMLEPLDHLPTRTATTAERAVLGTLE 246 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFH--------------------------- 274 C + I A G+ + DG Sbjct: 247 AGCSAPIGALARHDGARVDLMTFAGPRDGSRALLEADCARGVPAGHPADTPDDTPADTPD 306 Query: 275 ---EVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 R A +GR A+ +R +V Sbjct: 307 DSRNDDRVALDTAARELGRRVAEALRG-GGADVL 339 >gi|240171918|ref|ZP_04750577.1| porphobilinogen deaminase [Mycobacterium kansasii ATCC 12478] Length = 317 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 94/308 (30%), Positives = 143/308 (46%), Gaps = 15/308 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H ++ +ST GDR + E G G+FT Sbjct: 2 IRIGTRGSLLATTQAATVRDALIAN----GHPAELVTISTAGDR--SSAPIETLGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + G +D AVHS KD+PT I+A PR D RD ++ L +L S Sbjct: 56 TALREAIEDGRVDAAVHSHKDLPTAEDPRFTIAAIPPRNDPRDAVVARDGLVLGELPAGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + + Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDDV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ +E + + ++ ++ DT +V ERA LAEL+ C Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAADHRLAAVLAELDDADTRAAVTAERALLAELEAGCS 235 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V A DG S G A +G A + Sbjct: 236 APVGAIAEVVESIDEEGRVFEELSLRGCVAALDGSDVIRASGVGTSGRARELGLSVAAEL 295 Query: 297 RFISNKNV 304 + + + Sbjct: 296 FELGAREL 303 >gi|158317872|ref|YP_001510380.1| porphobilinogen deaminase [Frankia sp. EAN1pec] gi|158113277|gb|ABW15474.1| porphobilinogen deaminase [Frankia sp. EAN1pec] Length = 354 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 96/337 (28%), Positives = 158/337 (46%), Gaps = 40/337 (11%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 + ++P R+GTR S LA A + + +L P + ++P+ T GD+ +++IGG Sbjct: 15 LARRPLRLGTRRSALARAQSEKVAETLRTRLSRP---VELVPIVTAGDQSQ-VAISQIGG 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + L++GEID AVHS KD+PT GL ++A R D RDV +S + + L + Sbjct: 71 TGVFVSALRDALLAGEIDLAVHSLKDLPTATPDGLVLAAVPRRADTRDVLVSPSGRRLSE 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT S RR A LL V+ RG ++TR+ K + + A++LA+AG+ RL Sbjct: 131 LGPGARVGTGSPRRAAQLLALGHGFEVVPIRGNVDTRIKKAIDGEVDAVVLAHAGLDRLD 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIET-------------------HVNNPKAQELVK-V 220 + + EI++ E P+PGQGA+ IE + EL++ V Sbjct: 191 RLDAVTEIISPEVMLPAPGQGALAIECVRTPAGGGPAHDQTGPEAGRGFDEGLAELLRFV 250 Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC------------KG----STLYFYGI 264 ++ + +V ERAFLA ++ C + + A+ + + Sbjct: 251 LDDATSSVAVRAERAFLAGIEAGCTAPVGALAHVLPGTDARLVAGGDDAPAVGEIRLRAV 310 Query: 265 VLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 V A DG G+ D +G+ A + Sbjct: 311 VAAPDGGRVLRRELTGSAVDPEALGQRLADELLSAGA 347 >gi|304317047|ref|YP_003852192.1| porphobilinogen deaminase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778549|gb|ADL69108.1| porphobilinogen deaminase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 297 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 104/298 (34%), Positives = 152/298 (51%), Gaps = 10/298 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K R+GTR S LAL + + P I+ +STKGD + N L+EIGGKGL Sbjct: 2 KKIRVGTRSSELALTQTLIVINEIKKYK--PNIEFEIVKISTKGDSVLNAPLSEIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE LI+ EID AVHS KDMP ++ L++ + RED RDVFIS + + DL Sbjct: 60 FVKEIEDALINNEIDMAVHSMKDMPYEVPNDLKLLSVYRREDPRDVFISRS-EKFIDLKN 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++ IGTSSLRR L R DI ++ RG I TR+ K++ I+LA +GIKRL E Sbjct: 119 NARIGTSSLRRSVQLKNLRPDIEIVPIRGNIATRIKKMHELNLDGIVLAASGIKRLGLED 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNN-PKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +IK+ ++ P+P QG + +E + + E+ ++ T+ + ER + + G Sbjct: 179 MIKDYFPVDLIVPAPCQGILAVEIRRDFEEEFFEIYPMLLDAKTFFESSAERKIMKKFGG 238 Query: 243 SCKSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +CK + ++ K + DGK + G D IG + I Sbjct: 239 NCKIPLGIYSEYKRNGNDDLITVRVSYY-KDGK-LIKGRETGLMRDIDKIGDRLVEKI 294 >gi|254292449|ref|YP_003058472.1| porphobilinogen deaminase [Hirschia baltica ATCC 49814] gi|254040980|gb|ACT57775.1| porphobilinogen deaminase [Hirschia baltica ATCC 49814] Length = 323 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 104/303 (34%), Positives = 155/303 (51%), Gaps = 7/303 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +IG R SPLA+ A + + ++ I I +T GD++ ++ L + GGK Sbjct: 17 STQIVKIGARGSPLAVQQAEDFAARFKEIVGN-TVEIEIHTFTTSGDQLLDKRLQDAGGK 75 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT E++ +SG ID VHS KD+PT L GLQ+ YLPRED RD ++KDL Sbjct: 76 GLFTRELDIAQLSGRIDIVVHSLKDVPTVLPDGLQMGCYLPREDPRDALFGKVG-NIKDL 134 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GT+SLRR A L R D+ ++ FRG ++TRL KL +A A LLA AG+ RL Sbjct: 135 PHGATLGTASLRRSAQALALRPDLKIVMFRGNVQTRLRKLEEGQADATLLAAAGLNRLGM 194 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPK-AQELVKVINHEDTWDSVNCERAFLAEL 240 + E+ P+ GQG +C N + I+ ++ + ERAFL L Sbjct: 195 TDKAAGFMPKEEMLPACGQGIVCTTLTNNAEDWIFKACLQIDVLESRIAAIAERAFLKRL 254 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN----GNRCDAINIGRDAAQYI 296 DGSC++ IAG + + G VLA DG + + A ++G + + + Sbjct: 255 DGSCRTPIAGHLSFNETGVDMRGEVLADDGSKRWFSQMSLDTIPDENQAASLGFELGEKV 314 Query: 297 RFI 299 + Sbjct: 315 AKL 317 >gi|330946190|ref|XP_003306713.1| hypothetical protein PTT_19919 [Pyrenophora teres f. teres 0-1] gi|311315692|gb|EFQ85212.1| hypothetical protein PTT_19919 [Pyrenophora teres f. teres 0-1] Length = 398 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 106/347 (30%), Positives = 150/347 (43%), Gaps = 47/347 (13%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG----G 60 P IGTR S LA A SL D + P I P+ +GDR L ++ Sbjct: 30 PVNIGTRNSVLAQIQARAVERSLKDAY--PERTYNICPVVVQGDRDKITPLQQLSQGENA 87 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS----HTAQ 116 K L+T E+E L SG++D VH KDMPT+L L++ A L RED RD + Sbjct: 88 KSLWTGELESMLESGDLDIIVHCLKDMPTQLPDHLELGAILEREDPRDALLVSPRLPKET 147 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYA 174 +L L ++IGTSS+RR A L + + D RG + TRL KL+ AI+LA A Sbjct: 148 TLATLPQGAIIGTSSVRRAATLRKLYPHLKFADLRGNVGTRLGKLDAEDSPYSAIILAAA 207 Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 G+KR+ + I + L+ + GQGA+ IE N+ +EL+ I E T + + Sbjct: 208 GLKRMGLDNRITQYLSSTSGGMLHAVGQGALGIEIRKNDDAMKELMSKIRCERTTRACSA 267 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGS------------------------------TLYFY 262 ERA L L+G C I KG L Sbjct: 268 ERALLRTLEGGCSVPIGVETSWKGGKGLAVGPQPAKDYDKHGNAIEEDEPDVDDQELVLR 327 Query: 263 GIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIRFISNKNVFN 306 +V++ DGK E N +A +GR+ A+ + + Sbjct: 328 AMVVSVDGKESVEYEATRKVRNAEEAEEMGREVAKVLIEKGADKILE 374 >gi|256380712|ref|YP_003104372.1| porphobilinogen deaminase [Actinosynnema mirum DSM 43827] gi|255925015|gb|ACU40526.1| porphobilinogen deaminase [Actinosynnema mirum DSM 43827] Length = 313 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 96/309 (31%), Positives = 151/309 (48%), Gaps = 17/309 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIGTR S LALA +L + I+ +ST GDR ++ + EIG G Sbjct: 2 NRTLRIGTRGSALALAQTGTVAEALRAAGA----QVEIVTVSTPGDR-SHAPIAEIG-IG 55 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT + L GE+D AVHS KD+PT L ++A RED RD ++ +L +L Sbjct: 56 VFTSALRDALAHGEVDVAVHSYKDLPTAPDTRLSLAAIPQREDPRDALVARDGLTLGELP 115 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S +GT S RR L + ++ RG I++R+ ++ + + A++LA AGI RL + Sbjct: 116 PGSKVGTGSPRRATQLAALGLGLEILPIRGNIDSRMARVFDGELDAVVLARAGISRLGRV 175 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV-INHEDTWDSVNCERAFLAELD 241 + I E+L+ P+P QGA+ IE V++ + L++ ++ + +V ERA LA L+ Sbjct: 176 ENITEVLDPIQMLPAPAQGALAIECRVDDVDTEHLLRSTLDDSASRAAVTAERAMLAALE 235 Query: 242 GSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292 C + + A + G+V A DG S G+ A +GR Sbjct: 236 AGCSAPVGALADVVEDLDDEGAAVLRISLRGVVAAEDGD-LLRASATGDLTAAEELGRAL 294 Query: 293 AQYIRFISN 301 A + +S Sbjct: 295 AAELLDLSG 303 >gi|297543913|ref|YP_003676215.1| porphobilinogen deaminase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841688|gb|ADH60204.1| porphobilinogen deaminase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 299 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 92/298 (30%), Positives = 142/298 (47%), Gaps = 9/298 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK ++GTR S LAL + + + I+ ++T+GD + ++ ++EIGGKG Sbjct: 2 KKVIKVGTRSSELALVQTQMVINEIKKFRQ--DFEFEIVKITTQGDALIDKPVSEIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F +EIE L+ GEID AVHS KDMP ++ KGL++ A L RED +DVF+S DL Sbjct: 60 VFVKEIESALLKGEIDMAVHSMKDMPYEIPKGLKLMAVLKREDPKDVFVSRDGTQFMDLK 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IGTSSLRR+ L + DI ++ RG + TRL K+ I+L+ AG+ RL E Sbjct: 120 EGAKIGTSSLRRQVQLKALKPDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGLE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKA-QELVKVINHEDTWDSVNCERAFLAELD 241 +I E + P+P QG + +E + QE I T+ + ER L Sbjct: 180 SIITEYFPPDVVVPAPCQGILAVEIAESFDNIFQEFYPYIVDRRTFFEASVERELLKVFG 239 Query: 242 GSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 +C+ +A + + D + G + + + Sbjct: 240 VNCRQPFGAYAQYRKERDEEKINIKVVYQKED--KLLKSEVTGLIEETDKMIEKLIEE 295 >gi|284034243|ref|YP_003384174.1| porphobilinogen deaminase [Kribbella flavida DSM 17836] gi|283813536|gb|ADB35375.1| porphobilinogen deaminase [Kribbella flavida DSM 17836] Length = 294 Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats. Identities = 95/298 (31%), Positives = 148/298 (49%), Gaps = 10/298 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++GTR S LA A A +L ++ H + ++P+ T GD L +IGG G+F Sbjct: 2 IKLGTRRSALATAQAALVADALRNL----GHEVDLVPIVTTGDVNR-APLEQIGGTGVFV 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + L++GEID AVHS KD+PT + GL + A RED RDV ++ +L +L + Sbjct: 57 SALRDALLAGEIDIAVHSLKDLPTAPVDGLTLGAIPVREDPRDVLVARDGLTLGELQTGA 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GT S RR A L + + RG ++TR+ + + K A++LA AG+ RL + I Sbjct: 117 LVGTGSPRRVAQLEALGLGLELTGIRGNVDTRIAMVADGKVDAVVLARAGLARLGRLAEI 176 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ P+PGQGA+ IE ++ + ++ T +V ER LA L+ C Sbjct: 177 TETLDPIQMLPAPGQGALGIECRSDDTAVLAALAPLDDPGTRAAVTAERQLLATLEAGCT 236 Query: 246 SAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + + A G L+ G + DG +S NG+ D +GR A + Sbjct: 237 APVGALAEVVDGEDGPELWLRGALG-EDGGGVRRLSANGSVDDPAAVGRALANELLEQ 293 >gi|332519549|ref|ZP_08396016.1| porphobilinogen deaminase [Lacinutrix algicola 5H-3-7-4] gi|332045397|gb|EGI81590.1| porphobilinogen deaminase [Lacinutrix algicola 5H-3-7-4] Length = 527 Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats. Identities = 106/307 (34%), Positives = 163/307 (53%), Gaps = 9/307 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A +S L + H V++P+ + GD + ++ L E+G Sbjct: 1 MS-KTIRIGTRDSELALYQANAVKSQLEHL----GHKTVLVPVKSTGDIVLDKPLYELGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT ++ +++G+ID AVHS KD+PT L KG+ +A L R ++RD + T + Sbjct: 56 TGIFTRTLDIAMLNGDIDIAVHSLKDVPTLLPKGIVQAAVLKRGNVRDTLVYKTTEEFLG 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 A +VI TSSLRRKA L ++ D RG + TRL KL N ++ +A + A AGI RL Sbjct: 116 -AREAVIATSSLRRKAQWLNRYPTHTIEDIRGNVNTRLEKLKNTSRFNAAIFAAAGIGRL 174 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + +N+E P+P QGAI + + + + ++ INHE+T ER FL + Sbjct: 175 GL--RPETAVNLEWMIPAPAQGAIMVTALEEDEETRAILAEINHEETQICTQIEREFLNK 232 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C + I Y K + F G++L+ +G V R + +I A Y+ Sbjct: 233 LEGGCTAPIGALCYIKDEEVNFEGVLLSPNGTKKITVQRVKKLGEHTDIATWCADYVIDK 292 Query: 300 SNKNVFN 306 K++ + Sbjct: 293 GGKHLMD 299 >gi|257063872|ref|YP_003143544.1| porphobilinogen deaminase [Slackia heliotrinireducens DSM 20476] gi|256791525|gb|ACV22195.1| porphobilinogen deaminase [Slackia heliotrinireducens DSM 20476] Length = 318 Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 98/310 (31%), Positives = 146/310 (47%), Gaps = 8/310 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ F IGTR S LAL ++M P + I +T GD L EIG Sbjct: 1 MPER-FVIGTRGSKLALWQTETVGRAIMRA--FPEIEVEIRVRNTTGDINLASPLAEIGD 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQS 117 KGLFT E+E L+ GE+D VHS KD+ T+ +G ++ LPR D RDV + A S Sbjct: 58 KGLFTRELETDLLLGEVDMCVHSLKDLETEQPEGCVVAGVLPRADARDVLVCGPRIQAAS 117 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L ++ S IGT S RR A L ++ RG ++TR+ K + +LA AG+K Sbjct: 118 LAEVPEGSRIGTGSRRRVAQLKANFPNMVPEGIRGNVDTRVAKAEGDDYEGAILAAAGMK 177 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ E I L IED P+PGQGAI +E N +A ++ + +N T + ER L Sbjct: 178 RMGYEDHIAAYLPIEDMIPAPGQGAIAMEVLKKNERAYQIARALNDPVTKACTDAERFVL 237 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE--VSRNGNRCDAINIGRDAAQY 295 L+G C + I + F VL+ G + + + D +++ + Sbjct: 238 FSLEGGCSAPIGAHCRLEDGKYIFDACVLSLGGTKAARCHLEADADSADPMDMAWEVVSE 297 Query: 296 IRFISNKNVF 305 + + + Sbjct: 298 LIGEGARAIL 307 >gi|288561002|ref|YP_003424488.1| porphobilinogen deaminase HemC [Methanobrevibacter ruminantium M1] gi|288543712|gb|ADC47596.1| porphobilinogen deaminase HemC [Methanobrevibacter ruminantium M1] Length = 289 Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 95/293 (32%), Positives = 152/293 (51%), Gaps = 6/293 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LAL R L + I + + TKGD+ITN L + KGLFT Sbjct: 1 MIVGTRGSKLALVQTDYIRQCL---YNITGEEVEKNIIKTKGDKITNSQLYNMDSKGLFT 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E++ L+ E+D AVHS KD+PT+L + L+I A RE +V IS+ S +L S Sbjct: 58 RELDNALLDEEVDFAVHSLKDVPTELNEDLEIVAVPIRESPNEVLISN--YSWSELEEGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A D + RG +ETR+ K+ + + A ++A AG+ RL +K I Sbjct: 116 TLGTSSLRREAFCKHHNKDFELKPIRGNVETRIEKVMDGQVDATIMAEAGLNRLGLQKYI 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 K + P+ GQGA+ + T + + +E ++ +NH + V E+ L E+ C+ Sbjct: 176 KAKFPTDYIMPAAGQGALAVMTR-KDSEHKETIRKLNHYFSHQEVLAEKTILEEIGVGCQ 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 I + K + L I+L +G+I ++ + +G+ +A +G + + Sbjct: 235 WPIGAISGIKNNQLELKSILLDKNGEILYQKTLSGSIREAKEMGVQIGKEMIE 287 >gi|20089471|ref|NP_615546.1| porphobilinogen deaminase [Methanosarcina acetivorans C2A] gi|23821686|sp|Q8TT56|HEM3_METAC RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|19914376|gb|AAM04026.1| hydroxymethylbilane synthase [Methanosarcina acetivorans C2A] Length = 317 Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 100/300 (33%), Positives = 152/300 (50%), Gaps = 9/300 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI-GGKGLF 64 IGTR S LALA L + I + T GDR T+R L + GG G F Sbjct: 1 MIIGTRGSQLALAQTENVARLLKER----GVETSIKIIKTSGDRFTDRPLHAVSGGVGAF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 E++ +++GEID AVHS KDMPT +GL A L R+ D+ +++ +L +L Sbjct: 57 VRELDDVMLAGEIDIAVHSMKDMPTIRPEGLPTVAVLKRDTPFDILLTYDGTTLDELPEQ 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 ++IGTSSLRR A + R+R D+ + RG I+TRL KL + ILLA AG++R+ E + Sbjct: 117 AIIGTSSLRRTAQIRRYRPDLITQELRGNIDTRLRKLKEGQYDGILLAKAGLERMGWE-I 175 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 EIL+ + F PSP QG + + T +P+ + V ++H ++ ER ++EL G C Sbjct: 176 DGEILSPDFFCPSPNQGTVAVVTRA-DPEIEAAVSGLDHTESRIVTEIERILISELGGGC 234 Query: 245 KSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 + I +A ++ VL+ DGK + + R+ + + K Sbjct: 235 TTPIGSYAELTSDKQEIHIRAEVLSLDGKEDVRIDEFIPMLGGLEKARELGHRLVEMGGK 294 >gi|213406619|ref|XP_002174081.1| porphobilinogen deaminase [Schizosaccharomyces japonicus yFS275] gi|212002128|gb|EEB07788.1| porphobilinogen deaminase [Schizosaccharomyces japonicus yFS275] Length = 335 Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 95/318 (29%), Positives = 149/318 (46%), Gaps = 18/318 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG---GK 61 F +G+R S LAL L +++ P +N I+ T GD I N+ L E K Sbjct: 10 TFPLGSRKSKLALIQTNLVLKQLKELY--PEYNFPILSRDTVGDEIINKALFEFKTQMAK 67 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 L+T E+E L+ GE VHS KD+PT L +G+ I+ R D + +S+ Sbjct: 68 SLWTRELEVLLMHGECRMLVHSLKDLPTDLPEGMTIACITRRSCPLDAVVMRAGSPYKSV 127 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGI 176 +L +SV+GTSS+RR+A+L R + D RG + TRL KL ++ ++LA AG+ Sbjct: 128 SELPPNSVVGTSSIRRRAMLQRHFPHLKFRDIRGNVGTRLAKLDAPDSPFDCLILAAAGL 187 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 RL + I ++L + GQGA+ +E ++ + EL+K + +T S ERA Sbjct: 188 IRLNLKDRITQMLQAPFVFYAVGQGALAVEVRADDTEIIELLKPLQDMETTYSCLAERAL 247 Query: 237 LAELDGSCKSAIAGFAYC-----KGSTLYFYGIVLASDGKIFHEVS---RNGNRCDAINI 288 + L G C I C ++ G+V++SDG S + DA + Sbjct: 248 MKRLQGGCAIPIGVETQCLPLSKDKYSVVLQGMVVSSDGTRSAYASEFMEVSSEKDAEQL 307 Query: 289 GRDAAQYIRFISNKNVFN 306 G + A + + Sbjct: 308 GMNVATALLKRGAGAILE 325 >gi|293402361|ref|ZP_06646498.1| hydroxymethylbilane synthase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304208|gb|EFE45460.1| hydroxymethylbilane synthase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 299 Score = 292 bits (749), Expect = 4e-77, Method: Composition-based stats. Identities = 101/294 (34%), Positives = 155/294 (52%), Gaps = 2/294 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 + IGTR S LALA + + R+ L + + P H+ + ++TKGD + L ++ KG+F Sbjct: 3 YIIGTRGSALALAQSEQVRTLLQNTY--PQHSFTLQIIATKGDLQQHVALDQMDAKGIFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L++G+I AVHS KDMPT+L KGL + L RED RDVFIS T + +L + Sbjct: 61 KEIEEALLAGKIHMAVHSLKDMPTQLPKGLCFTKTLLREDARDVFISRTKTAFHELGPQA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGT S RRK L++ R DISV+ RG ++TRL K+ + I+LA AG+KRL+ + + Sbjct: 121 KIGTGSKRRKVQLMKLRPDISVVGIRGNVDTRLRKMEEQQLDGIVLAAAGLKRLQVQGIS 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E P+ GQGA+ IE + ++ + + + ER FL +DG C Sbjct: 181 YEYFPYTSMIPACGQGALAIEVKEQDATLLTMINALANTHIDQEIQIERTFLQAIDGGCH 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + + + F + D + DA + +AA+Y+ Sbjct: 241 TPVGAHCKITEKEIVFDALYGNEDCSKMCNLHWRRPLTDAQQLPFEAAKYLIKA 294 >gi|166033239|ref|ZP_02236068.1| hypothetical protein DORFOR_02964 [Dorea formicigenerans ATCC 27755] gi|166027596|gb|EDR46353.1| hypothetical protein DORFOR_02964 [Dorea formicigenerans ATCC 27755] Length = 310 Score = 292 bits (749), Expect = 4e-77, Method: Composition-based stats. Identities = 97/305 (31%), Positives = 147/305 (48%), Gaps = 13/305 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +R+GTR S LALA + L P ++ + T GD L +IG KG+F Sbjct: 3 YRVGTRGSKLALAQTKQVIEKLKSA--FPEDEFDVVIIKTTGDMDQKSRLDQIGSKGIFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE++L+ +I AVHS KDMP GL + RED RDV I A S+ DL + Sbjct: 61 KEIEEELLEEKIHLAVHSMKDMPDTTADGLIFAKAWKREDPRDVLILREAVSVDDLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGT S RRK LL+ R D++++ RG ++TR+ K+ + I+LA AGI RL +E+ I Sbjct: 121 VIGTGSKRRKYQLLKIRPDLNIVGIRGNVDTRIRKMQEEEMDGIVLAVAGINRLGREQEI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L + P+P QG + +E +N + + ++ ++T V ER FL ++ GSC Sbjct: 181 TCYLEPDQMIPAPAQGTLALEVKADNIQLIRKLNRLSDQETDICVKAERQFLKQIGGSCH 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-----------AINIGRDAAQ 294 + + + L + DGK + I R+A + Sbjct: 241 LPVGAYCKIQDEKLVLRAMFGTEDGKKMAYTKVESAVLNKIEDSSQIDEICRQIAREAVE 300 Query: 295 YIRFI 299 I+ Sbjct: 301 KIQMQ 305 >gi|15839903|ref|NP_334940.1| porphobilinogen deaminase [Mycobacterium tuberculosis CDC1551] gi|253797442|ref|YP_003030443.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN 1435] gi|254363472|ref|ZP_04979518.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis str. Haarlem] gi|308231570|ref|ZP_07412948.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu001] gi|308369414|ref|ZP_07417699.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu002] gi|308370431|ref|ZP_07421471.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu003] gi|308371690|ref|ZP_07425840.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu004] gi|308372913|ref|ZP_07430371.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu005] gi|308374024|ref|ZP_07434556.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu006] gi|308375179|ref|ZP_07442991.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu007] gi|308376421|ref|ZP_07438780.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu008] gi|308377443|ref|ZP_07479182.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu009] gi|308378656|ref|ZP_07483377.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu010] gi|308379797|ref|ZP_07487609.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu011] gi|308395586|ref|ZP_07492111.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu012] gi|13880040|gb|AAK44754.1| porphobilinogen deaminase [Mycobacterium tuberculosis CDC1551] gi|134148986|gb|EBA41031.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis str. Haarlem] gi|253318945|gb|ACT23548.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN 1435] gi|308216828|gb|EFO76227.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu001] gi|308327689|gb|EFP16540.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu002] gi|308332040|gb|EFP20891.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu003] gi|308335827|gb|EFP24678.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu004] gi|308339432|gb|EFP28283.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu005] gi|308343307|gb|EFP32158.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu006] gi|308347203|gb|EFP36054.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu007] gi|308351144|gb|EFP39995.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu008] gi|308355775|gb|EFP44626.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu009] gi|308359835|gb|EFP48686.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu010] gi|308363637|gb|EFP52488.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu011] gi|308367292|gb|EFP56143.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu012] gi|323721187|gb|EGB30249.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis CDC1551A] Length = 312 Score = 292 bits (749), Expect = 4e-77, Method: Composition-based stats. Identities = 92/308 (29%), Positives = 150/308 (48%), Gaps = 15/308 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H+ ++ +ST+GDR + + +G G+FT Sbjct: 5 IRIGTRGSLLATTQAATVRDALIA----GGHSAELVTISTEGDR-SMAPIASLG-VGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + +G +D AVHS KD+PT ++A PR D RD ++ +L +L + S Sbjct: 59 TALREAMEAGLVDAAVHSYKDLPTAADPRFTVAAIPPRNDPRDAVVARDGLTLGELPVGS 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLNK+++ AI++A AG+ RL + + Sbjct: 119 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNKVSSGDLDAIVVARAGLARLGRLDDV 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ +E + + ++ ++ DT +V ERA LA+L+ C Sbjct: 179 TETLEPVQMLPAPAQGALAVECRAGDSRLVAVLAELDDADTRAAVTAERALLADLEAGCS 238 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V A DG S G+ A +G A + Sbjct: 239 APVGAIAEVVESIDEDGRVFEELSLRGCVAALDGSDVIRASGIGSCGRARELGLSVAAEL 298 Query: 297 RFISNKNV 304 + + + Sbjct: 299 FELGAREL 306 >gi|242827493|ref|XP_002488841.1| porphobilinogen deaminase, putative [Talaromyces stipitatus ATCC 10500] gi|218712002|gb|EED11431.1| porphobilinogen deaminase, putative [Talaromyces stipitatus ATCC 10500] Length = 413 Score = 292 bits (749), Expect = 4e-77, Method: Composition-based stats. Identities = 103/339 (30%), Positives = 154/339 (45%), Gaps = 36/339 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT---LTEIGG 60 K R+G+R S +AL ++L H + S +GDR L + G Sbjct: 72 KAVRVGSRNSKMALIQTSSVAAALYKAHHGF-FTFPVSTHSVQGDRDKTSAFRDLAKAHG 130 Query: 61 ---------KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI 111 K L+T EIE +L++G+ID VHS KD+PT L G +I A+ R D D + Sbjct: 131 NKQTAADTAKSLWTLEIEARLLAGDIDLIVHSLKDVPTTLPDGCEIGAFPHRNDPTDALL 190 Query: 112 SH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKA 166 +SL++L SV+GT S+RR A L + + + + RG ++TR+ KL N++ Sbjct: 191 VKAGLPYKSLEELPAGSVVGTCSVRRTAQLRHYCPHLIIQECRGNVDTRVAKLDANDSPY 250 Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226 AI++A AGI RL E I + L+ + + GQGA+ IE + KA+ELV I+H T Sbjct: 251 TAIVVAAAGIVRLNLEHRITQRLSGPAYTYAVGQGALGIEIRKEDQKARELVACIDHWPT 310 Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCK---------------GSTLYFYGIVLASDGK 271 ERA L L G C + I + TLY G +L DG Sbjct: 311 RVRCLAERALLRFLQGGCSAPIGVHSAFVRTPAKGEPNVNDNHYEGTLYLTGTLLHPDGG 370 Query: 272 IFHEVSRNGNR---CDAINIGRDAAQYIRFISNKNVFNF 307 + G D+ IG+ + I + + + Sbjct: 371 MEIRAHEKGQVKCTADSETIGKSVGKKILDLGGAQILDI 409 >gi|330470294|ref|YP_004408037.1| porphobilinogen deaminase [Verrucosispora maris AB-18-032] gi|328813265|gb|AEB47437.1| porphobilinogen deaminase [Verrucosispora maris AB-18-032] Length = 336 Score = 292 bits (749), Expect = 4e-77, Method: Composition-based stats. Identities = 105/325 (32%), Positives = 169/325 (52%), Gaps = 24/325 (7%) Query: 1 MEKK----PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLT 56 M ++ P R+GTR S LA+A + +L P + ++ + T GDR ++ + Sbjct: 1 MSQRQPSGPLRLGTRGSKLAMAQSGHVAEALTARTGRP---VELVEVITAGDR-SSAPVH 56 Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116 +G G+F + L++ EID AVHS KD+PT + GL I+A PRED RD ++ + Sbjct: 57 RLG-VGVFVSALRDALVAREIDFAVHSYKDLPTAMPAGLHIAAVPPREDPRDALVARDGR 115 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYA 174 +L +LA + IGT +LRR A L +SV RG I+TRL ++ + AI+LA A Sbjct: 116 TLAELAPGASIGTGALRRIAQLHALGMQLSVSPIRGNIDTRLARVLGPDADLDAIVLARA 175 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G+ R+ + VI E L+ P+P QGA+ +E V++P+ EL+ ++H + +V ER Sbjct: 176 GLARIGRLDVITETLDPMLMLPAPAQGALAVECRVDDPEMVELLGTLDHAASRATVTAER 235 Query: 235 AFLAELDGSCKSAIAGF----------AYCKGS---TLYFYGIVLASDGKIFHEVSRNGN 281 A LA L+ C + +A + + +G +Y G V++ DG +SR G Sbjct: 236 AMLATLEAGCSAPVAAYAVVAEGEPTGSGVEGDVVQEIYLRGAVISPDGSRDIRLSRTGT 295 Query: 282 RCDAINIGRDAAQYIRFISNKNVFN 306 DA IG+ A + + ++ Sbjct: 296 LADAAEIGKALATELLDLGADSILG 320 >gi|323305779|gb|EGA59518.1| Hem3p [Saccharomyces cerevisiae FostersB] Length = 275 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 85/274 (31%), Positives = 129/274 (47%), Gaps = 13/274 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + IG R S LA+ + + + K P ++ + L T GD+I + L GG Sbjct: 1 MGPETLHIGGRKSKLAVIQSNHVLKLIEE--KYPDYDCKVFTLQTLGDQIQFKPLYSFGG 58 Query: 61 KGLFTEEIEKKLI----SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH--- 113 K L+T+E+E L S ++D VHS KDMPT L +G ++ R D D + Sbjct: 59 KALWTKELEDHLYHDDPSKKLDLIVHSLKDMPTLLPEGFELGGITKRVDPTDCLVMPFYS 118 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILL 171 +SL DL ++GTSS+RR A L R + RG I+TRL KL++ K I+L Sbjct: 119 AYKSLDDLPDGGIVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIIL 178 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ R+ E I + + + + GQGA+ IE + K +++ I + Sbjct: 179 ASAGLMRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCL 238 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYG 263 ERA + L+G C I + T + G Sbjct: 239 SERALMRTLEGGCSVPIGVESKYNEETKKITIKG 272 >gi|119174394|ref|XP_001239558.1| hypothetical protein CIMG_09179 [Coccidioides immitis RS] Length = 331 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 94/320 (29%), Positives = 147/320 (45%), Gaps = 17/320 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+K F IGTR S LAL R++L P + GD L K Sbjct: 5 ERKTFTIGTRKSQLALVQTDLVRNALQAA--FPDCEFKVHSRDAAGDLNKVTPLRAFTTK 62 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118 L+TEE+E+ LI+ ++D V+S KD+PT++ ++A + RE+ RDV + +L Sbjct: 63 NLWTEELEELLIAKQVDLVVNSLKDIPTQIPSACVLAAVMKRENPRDVLVLKKGLPSMTL 122 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGI 176 +L SV+GTSS+RR A L R + V D RG I+TRL KL + ++LA AG+ Sbjct: 123 AELPPGSVVGTSSVRRIAQLARHYPHLKVQDVRGNIDTRLAKLDAQDGPFSCLILAAAGL 182 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R +E I + L+ + + GQG + IE ++ ++++ I T + ER Sbjct: 183 LRTGREDRISQYLDSTNGKMLHAVGQGGLGIEIRTDDEVMRDMLNKIGDVKTTYTCLAER 242 Query: 235 AFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 + L L+G C + + L IV + DGK E+ +GN A Sbjct: 243 SLLRILEGGCSAPLGVETEWIQDDNGKDLLRLRSIVTSVDGKEAVEIEEDGNVQSDEAAE 302 Query: 287 NIGRDAAQYIRFISNKNVFN 306 G++ A + + Sbjct: 303 TFGKEVALKLVARGAGKILE 322 >gi|184200499|ref|YP_001854706.1| porphobilinogen deaminase [Kocuria rhizophila DC2201] gi|183580729|dbj|BAG29200.1| porphobilinogen deaminase [Kocuria rhizophila DC2201] Length = 314 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 93/310 (30%), Positives = 151/310 (48%), Gaps = 13/310 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M F +GTR S LA+ + ++ + ++ + T+GD + L+++GG Sbjct: 1 MSGAVFTVGTRGSQLAMTQSRWAAEAVSRAG---GIDHELVTVRTEGD-VLTGPLSQMGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + +++ G +D AVHS KD+PT ++GL+I A RED RD + +L + Sbjct: 57 TGVFATALRSQVLDGRVDLAVHSLKDLPTAPVEGLRIVALPEREDPRDALCARDGLTLAE 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL---NNNKAHAILLAYAGIK 177 L + +GT S RR A L R D+ ++D RG + TRLN++ + A++LA +G+K Sbjct: 117 LPEGAAVGTGSPRRVAQLRALRPDLRIVDIRGNVGTRLNRVAPADPGDLDAVVLAASGLK 176 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVN---NPKAQELVKVINHEDTWDSVNCER 234 RL E I E L+ P+PGQGA+ +E + ++ ++H T +V ER Sbjct: 177 RLGLEGRITEYLDPHVMLPAPGQGALALEVSARLDPSGALMRGLEAVDHLPTRLAVTAER 236 Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRD 291 A LA+L+ C + + FA G L +V DG S + +A GR Sbjct: 237 AVLAQLEAGCAAPVGTFARVAGDVLELDVVVANPDGSEVMRRSESVPAPSVEEAEAFGRR 296 Query: 292 AAQYIRFISN 301 A + Sbjct: 297 IADDLLAQGA 306 >gi|15607651|ref|NP_215024.1| porphobilinogen deaminase [Mycobacterium tuberculosis H37Rv] gi|31791692|ref|NP_854185.1| porphobilinogen deaminase [Mycobacterium bovis AF2122/97] gi|121636428|ref|YP_976651.1| porphobilinogen deaminase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660279|ref|YP_001281802.1| porphobilinogen deaminase [Mycobacterium tuberculosis H37Ra] gi|148821712|ref|YP_001286466.1| porphobilinogen deaminase [Mycobacterium tuberculosis F11] gi|167970665|ref|ZP_02552942.1| porphobilinogen deaminase [Mycobacterium tuberculosis H37Ra] gi|215402275|ref|ZP_03414456.1| porphobilinogen deaminase [Mycobacterium tuberculosis 02_1987] gi|215410034|ref|ZP_03418842.1| porphobilinogen deaminase [Mycobacterium tuberculosis 94_M4241A] gi|215425741|ref|ZP_03423660.1| porphobilinogen deaminase [Mycobacterium tuberculosis T92] gi|215429335|ref|ZP_03427254.1| porphobilinogen deaminase [Mycobacterium tuberculosis EAS054] gi|215444616|ref|ZP_03431368.1| porphobilinogen deaminase [Mycobacterium tuberculosis T85] gi|218752147|ref|ZP_03530943.1| porphobilinogen deaminase [Mycobacterium tuberculosis GM 1503] gi|219556337|ref|ZP_03535413.1| porphobilinogen deaminase [Mycobacterium tuberculosis T17] gi|224988900|ref|YP_002643587.1| porphobilinogen deaminase [Mycobacterium bovis BCG str. Tokyo 172] gi|254230857|ref|ZP_04924184.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis C] gi|254549461|ref|ZP_05139908.1| porphobilinogen deaminase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185382|ref|ZP_05762856.1| porphobilinogen deaminase [Mycobacterium tuberculosis CPHL_A] gi|260199512|ref|ZP_05767003.1| porphobilinogen deaminase [Mycobacterium tuberculosis T46] gi|260203666|ref|ZP_05771157.1| porphobilinogen deaminase [Mycobacterium tuberculosis K85] gi|289441896|ref|ZP_06431640.1| porphobilinogen deaminase [Mycobacterium tuberculosis T46] gi|289446056|ref|ZP_06435800.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis CPHL_A] gi|289552764|ref|ZP_06441974.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN 605] gi|289568434|ref|ZP_06448661.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis T17] gi|289573100|ref|ZP_06453327.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis K85] gi|289744220|ref|ZP_06503598.1| porphobilinogen deaminase [Mycobacterium tuberculosis 02_1987] gi|289749005|ref|ZP_06508383.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis T92] gi|289752545|ref|ZP_06511923.1| porphobilinogen deaminase [Mycobacterium tuberculosis EAS054] gi|289756587|ref|ZP_06515965.1| porphobilinogen deaminase [Mycobacterium tuberculosis T85] gi|289760632|ref|ZP_06520010.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis GM 1503] gi|294996019|ref|ZP_06801710.1| porphobilinogen deaminase [Mycobacterium tuberculosis 210] gi|297632998|ref|ZP_06950778.1| porphobilinogen deaminase [Mycobacterium tuberculosis KZN 4207] gi|297729974|ref|ZP_06959092.1| porphobilinogen deaminase [Mycobacterium tuberculosis KZN R506] gi|298523991|ref|ZP_07011400.1| porphobilinogen deaminase [Mycobacterium tuberculosis 94_M4241A] gi|313657302|ref|ZP_07814182.1| porphobilinogen deaminase [Mycobacterium tuberculosis KZN V2475] gi|54037281|sp|P64337|HEM3_MYCBO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|54041348|sp|P64336|HEM3_MYCTU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|158512923|sp|A1KFY6|HEM3_MYCBP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|158513358|sp|A5TZP0|HEM3_MYCTA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800256|sp|C1AKJ0|HEM3_MYCBT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|3261607|emb|CAB00957.1| PROBABLE PORPHOBILINOGEN DEAMINASE HEMC (PBG) (HYDROXYMETHYLBILANE SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN SYNTHASE) [Mycobacterium tuberculosis H37Rv] gi|31617278|emb|CAD93385.1| PROBABLE PORPHOBILINOGEN DEAMINASE HEMC (PBG) (HYDROXYMETHYLBILANE SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN SYNTHASE) [Mycobacterium bovis AF2122/97] gi|121492075|emb|CAL70538.1| Probable porphobilinogen deaminase hemC [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599916|gb|EAY58926.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis C] gi|148504431|gb|ABQ72240.1| porphobilinogen deaminase [Mycobacterium tuberculosis H37Ra] gi|148720239|gb|ABR04864.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis F11] gi|224772013|dbj|BAH24819.1| porphobilinogen deaminase [Mycobacterium bovis BCG str. Tokyo 172] gi|289414815|gb|EFD12055.1| porphobilinogen deaminase [Mycobacterium tuberculosis T46] gi|289419014|gb|EFD16215.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis CPHL_A] gi|289437396|gb|EFD19889.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN 605] gi|289537531|gb|EFD42109.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis K85] gi|289542188|gb|EFD45836.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis T17] gi|289684748|gb|EFD52236.1| porphobilinogen deaminase [Mycobacterium tuberculosis 02_1987] gi|289689592|gb|EFD57021.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis T92] gi|289693132|gb|EFD60561.1| porphobilinogen deaminase [Mycobacterium tuberculosis EAS054] gi|289708138|gb|EFD72154.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis GM 1503] gi|289712151|gb|EFD76163.1| porphobilinogen deaminase [Mycobacterium tuberculosis T85] gi|298493785|gb|EFI29079.1| porphobilinogen deaminase [Mycobacterium tuberculosis 94_M4241A] gi|326902339|gb|EGE49272.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis W-148] gi|328457228|gb|AEB02651.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN 4207] Length = 309 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 92/308 (29%), Positives = 150/308 (48%), Gaps = 15/308 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H+ ++ +ST+GDR + + +G G+FT Sbjct: 2 IRIGTRGSLLATTQAATVRDALIA----GGHSAELVTISTEGDR-SMAPIASLG-VGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + +G +D AVHS KD+PT ++A PR D RD ++ +L +L + S Sbjct: 56 TALREAMEAGLVDAAVHSYKDLPTAADPRFTVAAIPPRNDPRDAVVARDGLTLGELPVGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLNK+++ AI++A AG+ RL + + Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNKVSSGDLDAIVVARAGLARLGRLDDV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ +E + + ++ ++ DT +V ERA LA+L+ C Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAGDSRLVAVLAELDDADTRAAVTAERALLADLEAGCS 235 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V A DG S G+ A +G A + Sbjct: 236 APVGAIAEVVESIDEDGRVFEELSLRGCVAALDGSDVIRASGIGSCGRARELGLSVAAEL 295 Query: 297 RFISNKNV 304 + + + Sbjct: 296 FELGAREL 303 >gi|225010397|ref|ZP_03700869.1| porphobilinogen deaminase [Flavobacteria bacterium MS024-3C] gi|225005876|gb|EEG43826.1| porphobilinogen deaminase [Flavobacteria bacterium MS024-3C] Length = 303 Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats. Identities = 101/301 (33%), Positives = 146/301 (48%), Gaps = 9/301 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LA+ A +S L ++P+ + GD ++ L E+G G+ Sbjct: 3 KTLRIGTRDSALAMWQAKTVQSQLAAH----GIASELVPVKSLGDLKLDQPLYELGVTGV 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ ++ L++GEID AVHS KD+PT L KGL +A L R DV + +S Sbjct: 59 FTKTLDLALLAGEIDLAVHSYKDVPTVLAKGLSTAAVLKRASTADVLV---HKSPDFTTS 115 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 I TSSLRRKA L + ++D RG ++TRL KL NN + A AG+ RL Sbjct: 116 GLQIATSSLRRKAQWLAKYPEHQLVDIRGNVQTRLEKLANNSWGGAIFAAAGLARLDL-- 173 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + + + ++ P+P QGA+ + + E + V+N T ER FL EL+G Sbjct: 174 LPENAMRLDWMVPAPAQGAMVVVAQSAHTVLLEELSVLNDSQTALCTQIEREFLNELEGG 233 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C + I L+F G++ + DGK E + A GR AQ I K Sbjct: 234 CTAPIGALCTTTQDQLHFIGVLHSLDGKQHIETNTFVPLDQAPGYGRKMAQKILSQGGKA 293 Query: 304 V 304 + Sbjct: 294 L 294 >gi|189200240|ref|XP_001936457.1| porphobilinogen deaminase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187983556|gb|EDU49044.1| porphobilinogen deaminase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 399 Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats. Identities = 106/347 (30%), Positives = 149/347 (42%), Gaps = 47/347 (13%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG----G 60 P IGTR S LA A SL D + P I P+ +GDR L ++ Sbjct: 30 PVNIGTRNSVLAQIQARAVERSLKDAY--PERTYNICPVIVQGDRDKITPLQQLSQGENA 87 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS----HTAQ 116 K L+T E+E L SG++D VH KDMPT+L L++ A L RED RD + Sbjct: 88 KSLWTGELESMLESGDLDIIVHCLKDMPTQLPDHLELGAILEREDPRDALLVSPRLPKET 147 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYA 174 +L L + IGTSS+RR A L + + D RG + TRL KL+ AI+LA A Sbjct: 148 TLATLPQGATIGTSSVRRAATLRKLYPHLKFADLRGNVGTRLAKLDAEDSPYSAIILAAA 207 Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 G+KR+ + I + L+ + GQGA+ IE N+ +EL+ I E T + + Sbjct: 208 GLKRMGLDNRITQYLSSTSGGMLHAVGQGALGIEIRKNDEAMKELMSKIRCERTTRACSA 267 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGS------------------------------TLYFY 262 ERA L L+G C I KG L Sbjct: 268 ERALLRTLEGGCSVPIGVETSWKGGKGLSVGPQPAKDYDKHGNAVEEDEPDVDDQELVMR 327 Query: 263 GIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIRFISNKNVFN 306 +V++ DGK E N +A +GR+ A+ + + Sbjct: 328 AMVVSVDGKESVEYEATRKVRNAEEAEEMGREVAKILIEKGADKILE 374 >gi|257054363|ref|YP_003132195.1| porphobilinogen deaminase [Saccharomonospora viridis DSM 43017] gi|256584235|gb|ACU95368.1| hydroxymethylbilane synthase [Saccharomonospora viridis DSM 43017] Length = 316 Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats. Identities = 96/313 (30%), Positives = 157/313 (50%), Gaps = 19/313 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RIGTR S LA++ L + + + ++P+ST GDR ++ + EIG Sbjct: 5 SSRTLRIGTRASNLAMSQTRTIAKMLEEAGQ----KVELVPVSTPGDR-SSAPIAEIG-V 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT + + L++ E+D AVHS KD+PT G+ ++A RED RDV IS +L +L Sbjct: 59 GVFTSALREALLANEVDVAVHSYKDLPTAPQPGIVLAAVSKREDPRDVLISRDGLTLGEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GT S RR L + ++ RG I+TR+ K+ + + AI+LA AG+ R+ K Sbjct: 119 PPGAKVGTGSPRRMTQLRALGLGLEIVPIRGNIDTRIAKVTSGELDAIVLAKAGLTRVGK 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI-NHEDTWDSVNCERAFLAEL 240 +I E+++ P+P QGA+ +ET V++ + L++ I +HE T +V ERA LA L Sbjct: 179 LDLITEVIDPMQILPAPAQGALAVETRVDDVDTEHLLRSIVDHEATRVAVAAERAVLATL 238 Query: 241 DGSCKSAIAGFAYCKGS---------TLYFYGIVLAS---DGKIFHEVSRNGNRCDAINI 288 C + + A L G+ + D S ++ +A + Sbjct: 239 QAGCSAPVGALAEVVEDLDSEGAVVERLSLRGVAATATEGDSVQILRASGVADKHEADRL 298 Query: 289 GRDAAQYIRFISN 301 GR A + + Sbjct: 299 GRTVASELLDLGA 311 >gi|307266129|ref|ZP_07547673.1| porphobilinogen deaminase [Thermoanaerobacter wiegelii Rt8.B1] gi|306918819|gb|EFN49049.1| porphobilinogen deaminase [Thermoanaerobacter wiegelii Rt8.B1] Length = 299 Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats. Identities = 92/304 (30%), Positives = 142/304 (46%), Gaps = 12/304 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK ++G+R S LAL + + + I+ ++T+GD + ++ ++EIGGKG Sbjct: 2 KKVIKVGSRSSELALVQTQMVINEIKKFRQ--DFEFEIVKITTQGDALIDKPISEIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F +EIE L+ GEID AVHS KDMP ++ + L++ A L RED +DVF+S DL Sbjct: 60 VFVKEIESALLKGEIDMAVHSMKDMPYEIPEKLKLMAVLKREDPKDVFVSRNGTKFIDLK 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IGTSSLRR+ L R DI ++ RG + TRL K+ I+L+ AG+ RL E Sbjct: 120 KGAKIGTSSLRRQVQLKALRPDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGLE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKA-QELVKVINHEDTWDSVNCERAFLAELD 241 +I E + P+P QG + +E + QE I T+ + ER L Sbjct: 180 SIITEYFPPDVVVPAPCQGILAVEIAESFDNIFQEFYPYIVDRRTFFEASVERELLKVFG 239 Query: 242 GSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +C+ +A G + D + G + + I+ Sbjct: 240 VNCRQPFGAYAQYGRENDGEKIDIKVAYQKED--KLLKSEMTGLIVETDKMIEKL---IK 294 Query: 298 FISN 301 Sbjct: 295 EFGG 298 >gi|290958356|ref|YP_003489538.1| hydroxymethylbilane synthase [Streptomyces scabiei 87.22] gi|260647882|emb|CBG70987.1| putative hydroxymethylbilane synthase [Streptomyces scabiei 87.22] Length = 322 Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats. Identities = 84/315 (26%), Positives = 154/315 (48%), Gaps = 17/315 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LA++ + + ++ + P + ++ ++T GD ++ L +IGG G Sbjct: 6 NRALRLGTRRSTLAMSQSRQVADAVRRLTGRP---VELVEITTYGD-VSREQLAQIGGTG 61 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F + + L+ GE+D AVHS KD+PT L ++A R D RDV ++ + + L Sbjct: 62 VFVAALREALLRGEVDFAVHSLKDLPTTYPDELTLAAVPVRADARDVLVARDGLTFEQLP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 + +GT S RR A L + + RG ++TR+ + + A++LA AG+ R Sbjct: 122 AGARVGTGSSRRMAQLNAYARGHGLTIETVPIRGNVDTRIGYVRKGELDAVVLAAAGLSR 181 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + + + L+++ P+PGQGA+ IE + + + ++ DT +V ER+ LA Sbjct: 182 IGRIDEVTDFLSVDTVLPAPGQGALAIECAAADAELIAALAGLDDPDTRAAVTAERSLLA 241 Query: 239 ELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAINIG 289 L+ C + + FA + G+V +DG ++S G A+ +G Sbjct: 242 ALEAGCSAPVGAFADLLADGQTVKEMRLRGVVGTTDGSTLVQLSTTGPVPETYDQAMALG 301 Query: 290 RDAAQYIRFISNKNV 304 R+ A + + Sbjct: 302 RELAAEMLAKGAAGL 316 >gi|254821058|ref|ZP_05226059.1| porphobilinogen deaminase [Mycobacterium intracellulare ATCC 13950] Length = 315 Score = 292 bits (747), Expect = 6e-77, Method: Composition-based stats. Identities = 90/308 (29%), Positives = 144/308 (46%), Gaps = 15/308 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ + H ++ ++T GDR ++ + +G G+FT Sbjct: 2 IRIGTRGSLLATTQAGVVRDALIAL----GHPAELVTITTAGDR-SSGPIESLG-VGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + G +D AVHS KD+PT ++A R D RD ++ L +L S Sbjct: 56 TALREAMEEGRVDAAVHSHKDLPTADDPRFAVAAIPVRNDPRDAVVARDGLVLGELPPGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + + Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDDV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ +E + + ++ ++ DT SV ER LAEL+ C Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAGDTRLAAVLAELDDADTRASVTAERTLLAELEAGCS 235 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V A DG S G A +G A + Sbjct: 236 APVGAIAEVVESIDEEGRIFEELSLRGCVAALDGSDVIRASGIGTPGRARELGLSVAAEL 295 Query: 297 RFISNKNV 304 + + + Sbjct: 296 FELGAREL 303 >gi|269796870|ref|YP_003316325.1| hydroxymethylbilane synthase [Sanguibacter keddieii DSM 10542] gi|269099055|gb|ACZ23491.1| hydroxymethylbilane synthase [Sanguibacter keddieii DSM 10542] Length = 312 Score = 292 bits (747), Expect = 6e-77, Method: Composition-based stats. Identities = 99/317 (31%), Positives = 151/317 (47%), Gaps = 17/317 (5%) Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M P RIGTR S LAL L + P + I+P++T GD + +L+++G Sbjct: 1 MTGHPALRIGTRSSLLALTQTGTVADDLRRLTGRP---VEIVPVTTDGD-VLTGSLSQMG 56 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G G+F + L+ D AVHS KD+PT + GLQ R+D RD S L Sbjct: 57 GTGVFVTALRAALLDDRCDVAVHSLKDLPTAGVLGLQH-VTPVRQDPRDALCSRAGHRLA 115 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177 DL + +GT S RR A L R D+ V+D RG I+TRL +++ A++LA AG+ Sbjct: 116 DLPHGARVGTGSPRRAAQLRLVRPDLDVVDIRGNIDTRLGRVHPETGDLDAVVLAAAGLN 175 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETH----VNNPKAQELVKVINHEDTWDSVNCE 233 R+ +E I E++++ D P+PGQGA+ +ET +P ++ T SV E Sbjct: 176 RIGREHAITELISVTDMAPAPGQGALAVETRSSLLEEDPVVARAFDQLDDPATSLSVLAE 235 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-----AINI 288 RA LA L+ C + + A L + +V DG +++ D A+ + Sbjct: 236 RALLARLEAGCAAPVGTHATVSDGLLTLHAVVARPDGSEQLRHNQSTEVADTSTAEAVAL 295 Query: 289 GRDAAQYIRFISNKNVF 305 G A + + + Sbjct: 296 GEAVADHFLALGAASFI 312 >gi|289811310|ref|ZP_06541939.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 235 Score = 292 bits (747), Expect = 6e-77, Method: Composition-based stats. Identities = 79/225 (35%), Positives = 116/225 (51%) Query: 81 VHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLR 140 +HS KD+P GL + RED RD F+S+ SL DL S++GTSSLRR+ L Sbjct: 1 MHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAE 60 Query: 141 WRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQ 200 R D+ + RG + TRL KL+N AI+LA AG+KRL E I+ L + P+ GQ Sbjct: 61 RRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTALPPDVSLPAVGQ 120 Query: 201 GAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY 260 GA+ IE +++ + Q L+ +NH T V ERA L+G C+ I +A ++ Sbjct: 121 GAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGCQVPIGSYAEIINGEIW 180 Query: 261 FYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +V A DG + R G+ A +G A+ + + + Sbjct: 181 LRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENGARAIL 225 >gi|145476419|ref|XP_001424232.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124391295|emb|CAK56834.1| unnamed protein product [Paramecium tetraurelia] Length = 306 Score = 292 bits (747), Expect = 6e-77, Method: Composition-based stats. Identities = 92/309 (29%), Positives = 150/309 (48%), Gaps = 15/309 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTK-GDRITNRTLTEIGGK 61 +K RI TR S LA+A L II +S + GD L ++ Sbjct: 2 QKQIRIATRSSALAMAQTNYVIGELKQ-------EFEIIKVSNEVGDVNLQDPLYQMPTV 54 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118 G+FT+++E+ L+ + D AVHS KD+PT + L ++AY E DV + + +SL Sbjct: 55 GVFTKQVEQYLLEQKADVAVHSLKDLPTIIDAQLYLAAYTKFEQRGDVVLLNNKYNYKSL 114 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L IGTSSLRR A + +++I+ RG + TR+ KL+ + AI+LA AGI R Sbjct: 115 SELPEGFKIGTSSLRRIATIKNRYPKLNLINIRGNLNTRIQKLDEGQYDAIILAKAGILR 174 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + I L ++F +P Q A+ I+ ++ + ++++N D+ ER FL Sbjct: 175 LGLSERISFDLEEKEFLYAPAQAALGIQCRKDDLQTIARLQILNDIDSQKRCVAERMFLN 234 Query: 239 ELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L+G C+ IA ++ C + +Y G V+A DG E +G+ + I+ Sbjct: 235 LLEGGCRLPIAVYSECREDGQVYIKGRVMAVDGSKVIEDEA---LDHFEKVGQILCEKIK 291 Query: 298 FISNKNVFN 306 + + Sbjct: 292 VLGGVELIE 300 >gi|295839212|ref|ZP_06826145.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74] gi|197695664|gb|EDY42597.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74] Length = 314 Score = 292 bits (747), Expect = 7e-77, Method: Composition-based stats. Identities = 102/313 (32%), Positives = 161/313 (51%), Gaps = 15/313 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLALA + L P +I ++P++TK D+ L ++GGKGLF Sbjct: 1 MRIGTRSSPLALAQVEQVSGLLRKFE--PDLDIEVVPVTTKADKWQGD-LAQLGGKGLFV 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMP--TKLLKGLQISAYLPREDIRDVFISHTA---QSLKD 120 EI++ L G++D AVH KD+P + +GL +AYLPR+D+RDV + QSL Sbjct: 58 REIDQMLQRGQVDMAVHCMKDVPGDVPMPRGLIFAAYLPRDDVRDVLLVPEGSDVQSLAG 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-----AHAILLAYAG 175 L + + TS++RRKA + R R D++V+ RG + +R++KL+ K A++LA AG Sbjct: 118 LPPGASVATSAVRRKAQINRVRPDLNVVRVRGLVGSRIDKLDGRKPMDHMLDAMVLARAG 177 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 ++RL +++ + + P+ G GA+ +E ++ L++ +N E T + ER Sbjct: 178 LERLDLMHRARQVFEVAEMLPAVGAGALGLECREDDDAVAYLLQQLNDEPTMTEITAERV 237 Query: 236 FLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNG-NRCDAINIGRDAA 293 L L G C S IAG L G+V + DG F G + D +G Sbjct: 238 MLHGLRGHCNSPIAGHCVTDPDGQLSLRGMVFSRDGSKFVHAHFWGESMNDPAVLGSRVC 297 Query: 294 QYIRFISNKNVFN 306 + +++ Sbjct: 298 AELLRQGARDIIE 310 >gi|298252253|ref|ZP_06976056.1| porphobilinogen deaminase [Ktedonobacter racemifer DSM 44963] gi|297546845|gb|EFH80713.1| porphobilinogen deaminase [Ktedonobacter racemifer DSM 44963] Length = 334 Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 147/319 (46%), Gaps = 20/319 (6%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K IGTR S LA+ + + P I I + T GDR+T+ L+ IGG G+ Sbjct: 5 KRITIGTRASKLAMIQTQWIIERI--HQQWPGLEIAIEQIRTTGDRVTSVPLSRIGGDGV 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ------S 117 F EIE L ID AVHS KD+PT +GL + PRED+RDV +S + Sbjct: 63 FVTEIESALQERRIDIAVHSLKDLPTAQPEGLCVLTPGPREDVRDVLVSKGDLHISARGT 122 Query: 118 LKDLALH--SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 L+ + IGT SLRR A + D ++ RG ++TRL KL + AI+LA AG Sbjct: 123 LEGITPGRAPRIGTCSLRRTAQIRHLCPDAEILSLRGNVDTRLRKLEAGEYDAIILAAAG 182 Query: 176 IKRLKKE---KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 + RL + + + P+PGQGA+ +E + P +EL+ + + + + Sbjct: 183 LHRLDLQGTLEGKLSYFPVAQMLPAPGQGALGLEIR-DEPAFRELLAPLQDRNVQAATSA 241 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN------GNRCDAI 286 ER F+ L C +A A+ L G+V + DG+ V + +A Sbjct: 242 ERMFMRRLGAGCYLPVAAHAHIIDERLVLRGLVTSLDGQRRILVQQETGWNAYAFLENAE 301 Query: 287 NIGRDAAQYIRFISNKNVF 305 +G + A+ ++ Sbjct: 302 RLGIELAEIALAQGAHDII 320 >gi|159041687|ref|YP_001540939.1| porphobilinogen deaminase [Caldivirga maquilingensis IC-167] gi|189042877|sp|A8MDU3|HEM3_CALMQ RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157920522|gb|ABW01949.1| porphobilinogen deaminase [Caldivirga maquilingensis IC-167] Length = 305 Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats. Identities = 94/296 (31%), Positives = 153/296 (51%), Gaps = 3/296 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR S L+L +++ +K +I + T GD ++ L EIG KG+F Sbjct: 2 IIRIATRGSALSLKQTKIVMDRILEFNK--DVEFKLIIVKTTGDVDLSKPLYEIGVKGIF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 E+ + ++ GE D AVHS KDMP ++ L + PR++ RD +S ++ L L+ Sbjct: 60 EREVNQAVLRGEADVAVHSLKDMPAQISNDLTLVMTPPRDNPRDALVSLRQYTVDTLPLN 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S++GTSSLRR+ LL R D++V RG ++TR+ KLNN + A+++A AG++RL Sbjct: 120 SIVGTSSLRRRGFLLSLRRDVTVKPIRGNVDTRIRKLNNGEYDALIMAAAGLERLSINAN 179 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E ++ E PP+PGQG I + + ++++ + E+T+ ERAFL+ + C Sbjct: 180 VSE-ISPELMPPAPGQGIIGVVARRDRDDLIKVLRRSSDEETFKEAAAERAFLSRIGAGC 238 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 + G A F V+ DG S + + GR AA+ + + Sbjct: 239 HVPLGGLALLDDGYFDFTYGVVDPDGVEKFINSTRIDARNPEEAGRVAAEDLLRNA 294 >gi|329936060|ref|ZP_08285860.1| porphobilinogen deaminase [Streptomyces griseoaurantiacus M045] gi|329304538|gb|EGG48416.1| porphobilinogen deaminase [Streptomyces griseoaurantiacus M045] Length = 323 Score = 291 bits (746), Expect = 8e-77, Method: Composition-based stats. Identities = 90/321 (28%), Positives = 155/321 (48%), Gaps = 21/321 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ R+GTR S LA+A + + ++ +V P + ++ ++T GD + L +IGG Sbjct: 1 MTEQALRLGTRRSKLAMAQSGQVADAVGEVTGRP---VELVEITTYGDT-SREHLAQIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L+ GE+D AVHS KD+PT + L ++A RED RDV I+ + D Sbjct: 57 TGVFVAALREALLRGEVDLAVHSLKDLPTTQPEELTLAAVPLREDPRDVLIARDGLAFAD 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + +GT S RR A L + D + RG I+TR+ + + A++LA AG+ Sbjct: 117 LPEGARVGTGSPRRMAQLNAYARDHGTRIETVPIRGNIDTRIGYVRKGELDAVVLAAAGL 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNN----PKAQELVKVINHEDTWDSVNC 232 R+ + + + L+++ P+PGQGA+ +E + ++ T +V Sbjct: 177 NRIGRTSEVTDFLSVDTVLPAPGQGALAVECRTAGNPADAALAAALAQLDDPFTRAAVTA 236 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----C 283 ERA LA L+ C + + A + G+V +DG ++S G Sbjct: 237 ERALLAALEAGCSAPVGALADLLNDGQIDKEMRLRGVVGTTDGSTLVQLSTTGPVPETHD 296 Query: 284 DAINIGRDAAQYIRFISNKNV 304 A+ +GR+ A + + Sbjct: 297 QAMALGRELAAEMLAKGAAGL 317 >gi|303314269|ref|XP_003067143.1| porphobilinogen deaminase family protein [Coccidioides posadasii C735 delta SOWgp] gi|240106811|gb|EER24998.1| porphobilinogen deaminase family protein [Coccidioides posadasii C735 delta SOWgp] gi|320037407|gb|EFW19344.1| porphobilinogen deaminase [Coccidioides posadasii str. Silveira] Length = 331 Score = 291 bits (746), Expect = 8e-77, Method: Composition-based stats. Identities = 93/319 (29%), Positives = 147/319 (46%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+K F IGTR S LAL R++L P + GD L K Sbjct: 5 ERKTFTIGTRKSQLALVQTDLVRNALQAA--FPDCEFKVHSRDAAGDLNKVTPLRAFTTK 62 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118 L+TEE+E+ LI+ ++D V+S KD+PT++ ++A + RE+ RDV + +L Sbjct: 63 NLWTEELEELLIAKQVDLVVNSLKDIPTQIPTACVLAAVMKRENPRDVLVLKKGLPSMTL 122 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGI 176 +L SV+GTSS+RR A L R + V D RG I+TRL KL + ++LA AG+ Sbjct: 123 AELPPGSVVGTSSVRRIAQLARHYPHLKVQDVRGNIDTRLAKLDAQDGPFSCLILAAAGL 182 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R +E I + L+ + + GQG + IE ++ ++++ I T + ER Sbjct: 183 LRTGREDRISQYLDSTNGKMLHAVGQGGLGIEIRTDDEVMRDMLNKIGDVKTTYACLAER 242 Query: 235 AFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 + L L+G C + + L IV + DGK E+ +G+ A Sbjct: 243 SLLRILEGGCSAPLGVETEWIQDDNGKDLLRLRSIVTSVDGKEAVEIEEDGDVQSDEAAE 302 Query: 287 NIGRDAAQYIRFISNKNVF 305 G++ A + + Sbjct: 303 TFGKEVALKLVARGAGKIL 321 >gi|124027712|ref|YP_001013032.1| porphobilinogen deaminase [Hyperthermus butylicus DSM 5456] gi|158513943|sp|A2BL26|HEM3_HYPBU RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123978406|gb|ABM80687.1| Porphobilinogen deaminase [Hyperthermus butylicus DSM 5456] Length = 303 Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats. Identities = 94/301 (31%), Positives = 155/301 (51%), Gaps = 5/301 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+ TR S L++A ++ V P ++ + T+GD ++ T IGGKGLF Sbjct: 2 KLRVATRGSKLSIAQTMIALEAIKRVE--PSLEYELVIVKTRGDIHQDKPFTAIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ--SLKDLA 122 +E+ ++ G D AVHS KD+P+ + GL ++ PR+ DV + + ++ DL Sbjct: 60 EKEVNLAVLEGRADIAVHSLKDVPSAISPGLVLAMTPPRDPPYDVLVVRGGKEKTIWDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSS RR A+L R D+ RG ++TRL KL + AI+LA AG+KRL Sbjct: 120 SGAIVGTSSARRVAMLKHVRRDLVFKVLRGNVDTRLRKLEQGQYDAIVLAEAGLKRLGV- 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + + PP+PGQG I + T + +++ + + ERAFLA G Sbjct: 179 DIEYWRIPPDILPPAPGQGIIGVYTLSSRSDILPILEKASDQKAMAEARAERAFLAYAGG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C + + +A +G+TLYF+ + + DG EV G+ +G +AA +R ++ + Sbjct: 239 GCHTPLGAYAELRGNTLYFHAALASPDGSRRVEVRVEGDPDKPTQVGLEAAFELRRLAAR 298 Query: 303 N 303 Sbjct: 299 E 299 >gi|213964875|ref|ZP_03393074.1| porphobilinogen deaminase [Corynebacterium amycolatum SK46] gi|213952411|gb|EEB63794.1| porphobilinogen deaminase [Corynebacterium amycolatum SK46] Length = 310 Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 90/301 (29%), Positives = 147/301 (48%), Gaps = 7/301 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA A R +L+++ + ++ + T GD + + +IG G+F Sbjct: 6 TIRIGTRGSELATTQAGHVRDALIELGQPA----ELVIVKTAGDHNRHDPVEKIG-IGVF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+ + L G D VHS KD+PT + ++A R D R+ IS A L DL Sbjct: 61 TQALRHALREGVCDIIVHSFKDLPTVPEDDMMVAAVPERVDPREALISRDATPLMDLPEG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTS+ RR + L RSD+ ++ RG IETR+ ++ + A++LA AG++R + Sbjct: 121 ARVGTSAPRRVSQLRALRSDLELVPLRGNIETRMGRV-SEDLDAVILARAGLERTGRLGE 179 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+++ P+P QGA+ +E + + ++++ I+H + ERA L +L+ C Sbjct: 180 IAESLDVDVLMPAPAQGALALECRTADREIVDILRKIDHPVSHARAVAERAVLNKLEAGC 239 Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 + +A +A L V A DG + N A +GR A + Sbjct: 240 TAPVAAYATVSDSGELTLQAGVFALDGSRQLLETATANVDKADELGRKVAAALLERGAHE 299 Query: 304 V 304 V Sbjct: 300 V 300 >gi|228472965|ref|ZP_04057722.1| hydroxymethylbilane synthase [Capnocytophaga gingivalis ATCC 33624] gi|228275547|gb|EEK14324.1| hydroxymethylbilane synthase [Capnocytophaga gingivalis ATCC 33624] Length = 315 Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 99/302 (32%), Positives = 153/302 (50%), Gaps = 7/302 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK RIGTR S LAL A + ++ L + + ++P+ ++GD + L E+G G Sbjct: 9 KKTLRIGTRDSELALWQAKKVQTLLENF----GYTTSLVPVKSQGDLSLDIPLYEMGITG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT+ ++ ++ G ID AVHS KD+PT L KG+ A L R +++DV + Sbjct: 65 VFTKVLDVAMLQGSIDIAVHSMKDVPTSLPKGIVKGAVLTRANVQDVLVYKDGLDFLSQE 124 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + I T SLRRKA LR V + RG I TRL+KL+ + H + A A ++RL ++ Sbjct: 125 Q-ATIATGSLRRKAQWLRRYPTHQVENLRGNIATRLHKLHEHSWHGAIFAAAALERLAQD 183 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + L++E P+P QGAI ++P E + +IN ER FL L+G Sbjct: 184 HLQR--LSLEWMTPAPAQGAILAVAMDSDPYTLEALSLINDPKADTETQIERRFLKRLEG 241 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C + I A +G TL F G + + DGK EV ++ + D AQ + + Sbjct: 242 GCTAPIGAKATLEGDTLSFVGNLFSLDGKQAVEVRKSIPTHSIGSFPEDCAQELLHSGGE 301 Query: 303 NV 304 + Sbjct: 302 GI 303 >gi|91782420|ref|YP_557626.1| porphobilinogen deaminase [Burkholderia xenovorans LB400] gi|91686374|gb|ABE29574.1| Porphobilinogen deaminase [Burkholderia xenovorans LB400] Length = 285 Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 98/266 (36%), Positives = 147/266 (55%), Gaps = 3/266 (1%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 ++T+GD+I +RTL+++GGKGLF +E+E L G D AVHS KD+P L +G +S + Sbjct: 1 MTTRGDQILDRTLSKVGGKGLFVKELEAALADGRADLAVHSLKDVPMALPEGFALSTIME 60 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 RED RD +S+T SL L +V+GTSSLRR+A+L + V RG ++TRL KL+ Sbjct: 61 REDPRDALVSNTYDSLAALPEGAVVGTSSLRREAMLRMRYPHLEVRPLRGNLDTRLAKLD 120 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 AI+LA AG+KRL + I+ +L+ ED P+ GQGA+ IE + + + ++ Sbjct: 121 RGDYAAIILAAAGLKRLGLGERIRALLDPEDSLPAAGQGALGIEIRADRAELAAWLAPLH 180 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 HE T +V ER L GSC+ +A +A L+ GIV DG+ + Sbjct: 181 HEHTAAAVEAERMVSRALGGSCEVPLAAYATWHDGALHLRGIVATPDGQRVLSAQASAPA 240 Query: 283 ---CDAINIGRDAAQYIRFISNKNVF 305 AI +G++ A + + Sbjct: 241 TSVEQAIALGQEVAGALEQQGAMEIV 266 >gi|108797657|ref|YP_637854.1| porphobilinogen deaminase [Mycobacterium sp. MCS] gi|119866744|ref|YP_936696.1| porphobilinogen deaminase [Mycobacterium sp. KMS] gi|108768076|gb|ABG06798.1| hydroxymethylbilane synthase [Mycobacterium sp. MCS] gi|119692833|gb|ABL89906.1| hydroxymethylbilane synthase [Mycobacterium sp. KMS] Length = 314 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 93/310 (30%), Positives = 143/310 (46%), Gaps = 15/310 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA A R +L+ H ++ +ST+GDR + +IG G+F Sbjct: 7 PIRIGTRASLLATTQAGTIRDALIAR----GHAAELVLISTEGDRNQG-PIADIG-VGVF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T + + + G +D AVHS KD+PT + I A RED RD ++ L +L Sbjct: 61 TAALREAIHDGRVDAAVHSYKDLPTAADERFTIPAIPRREDPRDALVARDGLVLGELPAG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S +GTSS RR A L + + RG ++TRLN++ N + I++A AG+ R+ + Sbjct: 121 STVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVGNGELDGIVVARAGLARIGRLGD 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E L P+P QGA+ +E + L+ ++ DT +V ER LAEL+ C Sbjct: 181 VTETLEPVQMLPAPAQGALAVECRAGDTGLIALLAELDDADTRAAVTAERVLLAELEAGC 240 Query: 245 KSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 + + A + G V A DG S G A ++G A Sbjct: 241 SAPVGAIAEVVESIDEDGRVFEEVSLRGCVAALDGSDVIRASGIGTPGRAADLGVSVAAE 300 Query: 296 IRFISNKNVF 305 + + + + Sbjct: 301 LFELGARELI 310 >gi|261749160|ref|YP_003256845.1| porphobilinogen deaminase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497252|gb|ACX83702.1| porphobilinogen deaminase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 310 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 102/307 (33%), Positives = 146/307 (47%), Gaps = 9/307 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RIGTR SPLA++ A E + L + + ++GD I N L + G Sbjct: 2 NKIIRIGTRNSPLAISQAIEVQKVLHRLGYCSHLFF----IKSEGDLIQNIPLYKFKKVG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKDL 121 +FT + L+SG+ID AVHS KD+PT L + + +SAYL R D+ I + + L + Sbjct: 58 IFTRNLTDVLLSGKIDMAVHSLKDVPTSLPEKIVLSAYLKRGSFSDLLIYQGSSNFLLNS 117 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +VI T SLRR+A +++D RG I TRL KL NN + A G++RL Sbjct: 118 KIEAVIATGSLRRRAFWKNRYPHHTIVDLRGNINTRLKKLYNNSWKGAIFAKVGLERLGL 177 Query: 182 EK--VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 ++ PSPGQG I + T +N L K ++ +T S N ER FL Sbjct: 178 LNDLEGFNFKVLDWMIPSPGQGIIVVSTRKDNEWIHYLTKELDDRNTRLSANIERQFLKT 237 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L G C + I A K +YF GI+ + DG + G + IG A+ I Sbjct: 238 LGGGCVTPIGAHAIIKNKIIYFTGILFSLDGMQKIRKKKIGTNYNV--IGYQCAKEILEE 295 Query: 300 SNKNVFN 306 K + Sbjct: 296 GGKKILE 302 >gi|289577611|ref|YP_003476238.1| porphobilinogen deaminase [Thermoanaerobacter italicus Ab9] gi|289527324|gb|ADD01676.1| porphobilinogen deaminase [Thermoanaerobacter italicus Ab9] Length = 299 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 93/298 (31%), Positives = 141/298 (47%), Gaps = 9/298 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK ++G+R S LAL + + + I+ ++T+GD + ++ ++EIGGKG Sbjct: 2 KKVIKVGSRSSELALVQTQMVINEIKKFRQ--DFEFEIVKITTQGDALIDKPISEIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F +EIE L+ GEID AVHS KDMP + +GL++ L RED RDVFIS +L Sbjct: 60 VFVKEIESALLKGEIDMAVHSLKDMPYETPEGLKLIPVLKREDPRDVFISKDGTQFMNLK 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IGTSSLRR+ L RSD+ I RG I+TRL K+ I+L+ AG+ RL E Sbjct: 120 EGAKIGTSSLRRQVQLKDLRSDMQTIPIRGNIKTRLRKIEELNLDGIVLSAAGLHRLGLE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKA-QELVKVINHEDTWDSVNCERAFLAELD 241 +I E + P+P QG + +E + QE I T+ + ER L Sbjct: 180 SIITEYFPPDVVVPAPCQGILAVEIAESFDNIFQEFYSYIVDRRTFFEASIERELLKVFG 239 Query: 242 GSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 +C+ +A + + D + G + + + Sbjct: 240 VNCRQPFGAYAQYRKERDEEKINIKVVYQKED--KLLKSEVTGLIEETDKMIEKLIEE 295 >gi|257069787|ref|YP_003156042.1| hydroxymethylbilane synthase [Brachybacterium faecium DSM 4810] gi|256560605|gb|ACU86452.1| hydroxymethylbilane synthase [Brachybacterium faecium DSM 4810] Length = 337 Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 100/335 (29%), Positives = 157/335 (46%), Gaps = 33/335 (9%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR S LAL + ++L+D H + ++ +ST+GDR L +IGG Sbjct: 1 MTGASLRIGTRASDLALTQSGHVGAALVD---GTGHEVELVHVSTRGDRDRTSPLAQIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L+ G +D VHS KD+PT L+ + ++ Y PRED RD + +L Sbjct: 58 TGVFVTAVRQALLDGTVDVVVHSCKDLPTAPLEEITLACYPPREDPRDALCARDGLTLAQ 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKR 178 L S +GT S RR A LLR R D+ V RG +ETRL + +A A++LA +G++R Sbjct: 118 LPAGSRVGTGSPRRAAQLLRARPDLEVTGIRGNVETRLKRALGPEADLDAVVLAASGLRR 177 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIE----THVNNPKAQELVKVINHEDTWDSVNCER 234 + +E VI E+L +E P+P QGA+ +E P E + ++ T +V ER Sbjct: 178 VGREAVISELLPVEVMLPAPAQGALAVEATTAALAQEPWFAERLTAVDDPATRAAVTAER 237 Query: 235 AFLAELDGSCKSAIAGFAYCK-------------GSTLYFYGIVLASDGKIFHEVSR--- 278 L L+ C + +A +A + G L + + +DG E Sbjct: 238 MLLRTLEAGCSAPVAAYAEIEAPGAATAEGEPAGGGVLRLRALAIRTDGSHVVEGEARMA 297 Query: 279 --------NGNRCDAINIGRDAAQYIRFISNKNVF 305 +G +G + A + ++ Sbjct: 298 LDLAADALSGPESVPAALGAELAADLLSRGAGDIL 332 >gi|41410101|ref|NP_962937.1| porphobilinogen deaminase [Mycobacterium avium subsp. paratuberculosis K-10] gi|254777076|ref|ZP_05218592.1| porphobilinogen deaminase [Mycobacterium avium subsp. avium ATCC 25291] gi|55976459|sp|Q73SS0|HEM3_MYCPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|41398934|gb|AAS06553.1| HemC [Mycobacterium avium subsp. paratuberculosis K-10] Length = 315 Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 91/308 (29%), Positives = 144/308 (46%), Gaps = 15/308 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H ++ ++T GDR ++ + +G G+FT Sbjct: 2 IRIGTRGSLLATTQAGGVRDALIAR----GHPAELVTITTAGDR-SSGPIESLG-VGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + G +D AVHS KD+PT ++A R D RD ++ L +L S Sbjct: 56 TALREAIEEGRVDAAVHSHKDLPTADDPRFAVAAIPARNDPRDAVVARDGLVLAELPPGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + + Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLGDV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ +E + + ++ ++ DT SV ERA LAEL+ C Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAGDSRLAAVLAELDDADTRASVTAERALLAELEAGCS 235 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V A DG S G A +G A + Sbjct: 236 APVGAIAEVVESIDEDGRIFEELSLRGCVAALDGSDVIRASGIGTPGRARELGLSVAAEL 295 Query: 297 RFISNKNV 304 + + + Sbjct: 296 FELGAREL 303 >gi|118467030|ref|YP_883768.1| porphobilinogen deaminase [Mycobacterium avium 104] gi|158512461|sp|A0QLI0|HEM3_MYCA1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|118168317|gb|ABK69214.1| porphobilinogen deaminase [Mycobacterium avium 104] Length = 315 Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 91/308 (29%), Positives = 144/308 (46%), Gaps = 15/308 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H ++ ++T GDR ++ + +G G+FT Sbjct: 2 IRIGTRGSLLATTQAGGVRDALIAR----GHPAELVTITTAGDR-SSGPIESLG-VGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + G +D AVHS KD+PT ++A R D RD ++ L +L S Sbjct: 56 TALREAIEEGRVDAAVHSHKDLPTADDPRFAVAAIPARNDPRDAVVARDGLVLGELPPGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + + Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLGDV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ +E + + ++ ++ DT SV ERA LAEL+ C Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAGDSRLAAVLAELDDADTRASVTAERALLAELEAGCS 235 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V A DG S G A +G A + Sbjct: 236 APVGAIAEVVESIDEDGRIFEELSLRGCVAALDGSDVIRASGIGTPGRARELGLSVAAEL 295 Query: 297 RFISNKNV 304 + + + Sbjct: 296 FELGAREL 303 >gi|260654411|ref|ZP_05859901.1| hydroxymethylbilane synthase [Jonquetella anthropi E3_33 E1] gi|260631044|gb|EEX49238.1| hydroxymethylbilane synthase [Jonquetella anthropi E3_33 E1] Length = 714 Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 90/298 (30%), Positives = 149/298 (50%), Gaps = 9/298 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P R+ +R S LA+A + L H+ ++ IIP T+GD + +R L GGKGL Sbjct: 424 RPLRLASRESELAMAQSRLVAERL---HEATGFDVEIIPFRTRGDAVADRRLESAGGKGL 480 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ ++SG+ D AVHS KDMP+ GL +A + R+ D + + Sbjct: 481 FVKELERAILSGQADLAVHSLKDMPSSCPDGLAFAALMDRQTAFDCLVLRPGLT----GR 536 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 IGTSS RR A SD + RG + TRL+KL+ + A++LA AG++RL ++ Sbjct: 537 PVRIGTSSARRIAQGRALFSDAQFVPLRGNLRTRLSKLDGGEFDALILAEAGLRRLGLQE 596 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + + + + PS GQG + ++ + P +LV ++ ERAF+ L+G Sbjct: 597 RVSRVFSADQMIPSAGQGTLAVQCPFDGP-VFDLVSQLDEPAVRTCCLAERAFIDRLNGG 655 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C + +A G T+ G+ + DGK +G D ++ + A ++ + Sbjct: 656 CTAPHGAYARVDGETIEMIGLYVRPDGKTL-SGKISGPAADGPSLAAELADRLKRRGD 712 >gi|126433281|ref|YP_001068972.1| porphobilinogen deaminase [Mycobacterium sp. JLS] gi|126233081|gb|ABN96481.1| hydroxymethylbilane synthase [Mycobacterium sp. JLS] Length = 314 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 93/310 (30%), Positives = 143/310 (46%), Gaps = 15/310 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA A R +L+ H ++ +ST+GDR + +IG G+F Sbjct: 7 PIRIGTRASLLATTQAGTIRDALIGR----GHAAELVLISTEGDRNQG-PIADIG-VGVF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T + + + G +D AVHS KD+PT + I A RED RD ++ L +L Sbjct: 61 TAALREAIHDGRVDAAVHSYKDLPTAADERFTIPAIPRREDPRDALVARDGLVLGELPAG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S +GTSS RR A L + + RG ++TRLN++ N + I++A AG+ R+ + Sbjct: 121 STVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVGNGELDGIVVARAGLARIGRLGD 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E L P+P QGA+ +E + L+ ++ DT +V ER LAEL+ C Sbjct: 181 VTETLEPVQMLPAPAQGALAVECRAGDTGLIALLAELDDADTRAAVTAERVLLAELEAGC 240 Query: 245 KSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 + + A + G V A DG S G A ++G A Sbjct: 241 SAPVGAIAEVVESIDEDGRVFEEVSLRGCVAALDGSDVIRASGIGTPGRAADLGVSVAAE 300 Query: 296 IRFISNKNVF 305 + + + + Sbjct: 301 LFELGARELI 310 >gi|239607866|gb|EEQ84853.1| porphobilinogen deaminase [Ajellomyces dermatitidis ER-3] Length = 347 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 94/319 (29%), Positives = 147/319 (46%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K F IGTR S LAL R +L P + I+ D L E K Sbjct: 17 TKTTFTIGTRRSKLALVQTDLVRDALKAA--WPQYEFNILTKDAAADLDKVTPLREFTSK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118 L+TEE+E+ L++ +ID VHS KD+PT++ + + A +PRED RDV + +L Sbjct: 75 NLWTEELEELLVAKQIDLVVHSLKDVPTQIPETCILGAMMPREDPRDVLVIKKGLPSMTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 +L SV+GTSS+RR A L R + D RG I+TRL KL+ + ++LA AG+ Sbjct: 135 AELPAGSVVGTSSVRRIAQLSRHYPQLIAKDVRGNIDTRLAKLDAEDGPFSCLILAAAGL 194 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R + I L+ + + GQG + IE ++ +++V+ I + T + ER Sbjct: 195 LRTGQGDRITYYLDSKHGKMLHAVGQGGLGIEIRADDEHMKQMVEKIGDKKTTLACLAER 254 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 L L+G C + + L IV + DGK E+ ++ + +A Sbjct: 255 NLLRTLEGGCSAPLGVETEWVQDSEGKENLRLRAIVASVDGKEAVEIEKDKDVKSGEEAE 314 Query: 287 NIGRDAAQYIRFISNKNVF 305 G+ A + + + Sbjct: 315 VFGKQVADELVTLGAGRIL 333 >gi|326391319|ref|ZP_08212859.1| porphobilinogen deaminase [Thermoanaerobacter ethanolicus JW 200] gi|325992648|gb|EGD51100.1| porphobilinogen deaminase [Thermoanaerobacter ethanolicus JW 200] Length = 299 Score = 288 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 91/298 (30%), Positives = 141/298 (47%), Gaps = 9/298 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK ++GTR S LAL + + + I+ ++T+GD + ++ ++EIGGKG Sbjct: 2 KKVIKVGTRSSELALKQTAMVINEIKKFRQ--DFEFEIVKITTQGDALIDKPVSEIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F +EIE L+ GEID AVHS KDMP ++ KGL++ A L RED +DVF+S DL Sbjct: 60 VFVKEIESALLKGEIDMAVHSMKDMPYEIPKGLKLMAVLKREDPKDVFVSRDGTQFMDLK 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IGTSSLRR+ L + DI ++ RG + TRL K+ I+L+ AG+ RL E Sbjct: 120 EGAKIGTSSLRRQVQLKALKPDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGLE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKA-QELVKVINHEDTWDSVNCERAFLAELD 241 +I E + P+P QG + +E + QE I T+ + ER L Sbjct: 180 NIITEYFPPDVVVPAPCQGILSVEIAESFDNIFQEFYPYIVDRKTFFEASVERELLKAFG 239 Query: 242 GSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 +C+ +A + + + G + + + Sbjct: 240 VNCRQPFGAYAQYRKEEDEEKINIKVAYQKEN--KLLKSEATGLIEETDKMIEKLIEE 295 >gi|305679995|ref|ZP_07402805.1| hydroxymethylbilane synthase [Corynebacterium matruchotii ATCC 14266] gi|305660615|gb|EFM50112.1| hydroxymethylbilane synthase [Corynebacterium matruchotii ATCC 14266] Length = 298 Score = 288 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 88/299 (29%), Positives = 143/299 (47%), Gaps = 8/299 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LA A R +L H P + ++T GD E G G+FT+ Sbjct: 4 IGTRGSLLATTQAGHVRDALTS-HGYPS---ELRIVTTTGDVNL--APVERIGVGVFTQA 57 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 + L++GE D AVHS KD+PT + + RE+ RD I+ +L +L +V+ Sbjct: 58 LRDSLLAGECDIAVHSFKDLPTAVDE-RFHLVVPHRENARDCLIARNNLTLAELPTGAVV 116 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT + RR A L R DI + RG I+TR+ K+++ + A++LAYAG+ R+ + E Sbjct: 117 GTGAPRRIAQLKALRPDIHTVPLRGNIDTRMAKVHDGELDAVVLAYAGLSRVHRADEATE 176 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + + +F P+P QGA+ +E ++ + I + + ER LA L+ C + Sbjct: 177 VFDPLEFLPAPAQGALAVECRADDADTIAAITTIADPKAYACAHTERVVLARLEAGCTAP 236 Query: 248 IAGFAYCKGSTL-YFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A +A + + V+A DG + G A N+G A+ + ++ Sbjct: 237 VAAYATVAADNIMTLHAAVIAVDGSATLRATAAGPIDTAENLGMTVARALLDDGASSLL 295 >gi|58699644|ref|ZP_00374329.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila ananassae] gi|58533839|gb|EAL58153.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila ananassae] Length = 267 Score = 288 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 104/263 (39%), Positives = 148/263 (56%), Gaps = 6/263 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LA+ A E + L+D P +I I+ + T GD+ N L EIGGKGLF Sbjct: 3 VKIGTRGSKLAVVQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFI 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE +L+ ID AVHS KD+P GL I L R D FISH SL+ L + Sbjct: 61 KEIEAELLENNIDMAVHSLKDVPAFFSWGLTIPCVLERLSPCDAFISHKHNSLESLPQQA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 I TS++RRK LL +R D++++ RG + TR L N I+LA AG+ RL+K +I Sbjct: 121 TIATSAIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLI 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L + + GQGAICI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC Sbjct: 178 TEVLPPKVMLSAVGQGAICIQCRRNDVKIIDLLEKINNNMSFIGVKSERSFMKTVNGSCF 237 Query: 246 SAIAGFAY-CKGSTLYFYGIVLA 267 + +A A + LY V Sbjct: 238 TPLAALAEYVSENMLYLSLYVGR 260 >gi|327355808|gb|EGE84665.1| porphobilinogen deaminase [Ajellomyces dermatitidis ATCC 18188] Length = 347 Score = 288 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 94/319 (29%), Positives = 146/319 (45%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K F IGTR S LAL R +L P + I+ D L E K Sbjct: 17 TKTTFTIGTRRSKLALVQTDLVRDALKAA--WPQYEFNILTKDAAADLDKVTPLREFTSK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118 L+TEE+E+ L++ +ID VHS KD+PT++ + + A +PRED RDV + +L Sbjct: 75 NLWTEELEELLVAKQIDLVVHSLKDVPTQIPETCILGAMMPREDPRDVLVIKKGLPSMTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 +L SV+GTSS+RR A L R + D RG I+TRL KL+ + ++LA AG+ Sbjct: 135 AELPAGSVVGTSSVRRIAQLSRHYPQLIAKDVRGNIDTRLAKLDAEDGPFSCLILAAAGL 194 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R + I L + + GQG + IE ++ +++V+ I + T + ER Sbjct: 195 LRTGQGDRITYYLGSKHGKMLHAVGQGGLGIEIRADDEHMKQMVEKIGDKKTTLACLAER 254 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 L L+G C + + L IV + DGK E+ ++ + +A Sbjct: 255 NLLRTLEGGCSAPLGVETEWVQDSEGKENLRLRAIVASVDGKEAVEIEKDKDVKSGEEAE 314 Query: 287 NIGRDAAQYIRFISNKNVF 305 G+ A + + + Sbjct: 315 VFGKQVADELVTLGAGRIL 333 >gi|261198286|ref|XP_002625545.1| porphobilinogen deaminase [Ajellomyces dermatitidis SLH14081] gi|239595508|gb|EEQ78089.1| porphobilinogen deaminase [Ajellomyces dermatitidis SLH14081] Length = 347 Score = 288 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 94/319 (29%), Positives = 146/319 (45%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K F IGTR S LAL R +L P + I+ D L E K Sbjct: 17 TKTTFTIGTRRSKLALVQTDLVRDALKAA--WPQYEFNILTKDAAADLDKVTPLREFTSK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS---L 118 L+TEE+E+ L++ +ID VHS KD+PT++ + + A +PRED RDV + L Sbjct: 75 NLWTEELEELLVAKQIDLVVHSLKDVPTQIPETCILGAMMPREDPRDVLVIKKGLPSMAL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 +L SV+GTSS+RR A L R + D RG I+TRL KL+ + ++LA AG+ Sbjct: 135 AELPAGSVVGTSSVRRIAQLSRHYPQLIAKDVRGNIDTRLAKLDAEDGPFSCLILAAAGL 194 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R + I L+ + + GQG + IE ++ +++V+ I + T + ER Sbjct: 195 LRTGQGDRITYYLDSKHGKMLHAVGQGGLGIEIRADDEHMKQMVEKIGDKKTTLACLAER 254 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 L L+G C + + L IV + DGK E+ ++ + +A Sbjct: 255 NLLRTLEGGCSAPLGVETEWVQDSEGKENLRLRAIVASVDGKEAVEIEKDKDVKSGEEAE 314 Query: 287 NIGRDAAQYIRFISNKNVF 305 G+ A + + + Sbjct: 315 VFGKQVADELVTLGAGRIL 333 >gi|325846167|ref|ZP_08169236.1| hydroxymethylbilane synthase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481646|gb|EGC84682.1| hydroxymethylbilane synthase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 779 Score = 288 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 95/301 (31%), Positives = 147/301 (48%), Gaps = 6/301 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IG+R S LAL A + L I+ +STKGDRI +R + ++ KG+F Sbjct: 2 IKIGSRASKLALIQANMVKDILEK----EGLEAQIVEISTKGDRIRDRKIDQLNSKGVFV 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EIE+KL+ ID AVHS KDMP+++ L + L ED RD F+ D ++ Sbjct: 58 REIEEKLLDKTIDLAVHSLKDMPSQIDDRLIFTPPLKGEDPRDCFVGKDIFKKMDDLNNA 117 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GT S RR + ++I RG +ETR+ K+ + ++LA +G+ R + I Sbjct: 118 LVGTGSNRRVCQGKNYFTNIKFKAIRGNVETRIKKVQSENLDGVILAKSGLIRAGLDGEI 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ F PSP QG + IE + K E+ K + E T + ERAF EL C Sbjct: 178 NFDLDPHIFTPSPCQGILGIEIRKEDKKLFEIFKKNSDEKTLFRMETERAFQKELGADCS 237 Query: 246 SAIAGFAYCKGSTLYFYG-IVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + + F + G + D +I +E +GN D IN+ + A+ ++ S K + Sbjct: 238 TPMGIFTEIDHDKITLTGSMAFDKDDRINYE-KVSGNISDRINLAQKLARTLKKKSYKKI 296 Query: 305 F 305 Sbjct: 297 I 297 >gi|167038985|ref|YP_001661970.1| porphobilinogen deaminase [Thermoanaerobacter sp. X514] gi|300913424|ref|ZP_07130741.1| porphobilinogen deaminase [Thermoanaerobacter sp. X561] gi|307723560|ref|YP_003903311.1| porphobilinogen deaminase [Thermoanaerobacter sp. X513] gi|166853225|gb|ABY91634.1| porphobilinogen deaminase [Thermoanaerobacter sp. X514] gi|300890109|gb|EFK85254.1| porphobilinogen deaminase [Thermoanaerobacter sp. X561] gi|307580621|gb|ADN54020.1| porphobilinogen deaminase [Thermoanaerobacter sp. X513] Length = 299 Score = 288 bits (739), Expect = 6e-76, Method: Composition-based stats. Identities = 91/298 (30%), Positives = 141/298 (47%), Gaps = 9/298 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK ++GTR S LAL + + + I+ ++T+GD + ++ ++EIGGKG Sbjct: 2 KKVIKVGTRSSELALKQTAMVINEIKKFRQ--DFEFEIVKITTQGDALIDKPVSEIGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F +EIE L+ GEID AVHS KDMP ++ KGL++ A L RED +DVF+S DL Sbjct: 60 VFVKEIESALLKGEIDMAVHSMKDMPYEIPKGLKLMAVLKREDPKDVFVSGDGTQFMDLK 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IGTSSLRR+ L + DI ++ RG + TRL K+ I+L+ AG+ RL E Sbjct: 120 EGAKIGTSSLRRQVQLKALKPDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGLE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKA-QELVKVINHEDTWDSVNCERAFLAELD 241 +I E + P+P QG + +E + QE I T+ + ER L Sbjct: 180 NIITEYFPPDVVVPAPCQGILAVEIAESFDNIFQEFYPYIVDRKTFFEASVERELLKAFG 239 Query: 242 GSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 +C+ +A + + + G + + + Sbjct: 240 VNCRQPFGAYAQYRKEEDEEKINIKVAYQKEN--KLLKSEVTGLIEETDKMIEKLIEE 295 >gi|309389759|gb|ADO77639.1| porphobilinogen deaminase [Halanaerobium praevalens DSM 2228] Length = 310 Score = 288 bits (739), Expect = 6e-76, Method: Composition-based stats. Identities = 102/306 (33%), Positives = 159/306 (51%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK + IGTR S LAL ++ L K P I +ST GDR ++ +EI +G Sbjct: 2 KKEYIIGTRNSSLALKQCEILKAKLSS--KFPELEFKIKEISTTGDRERDKKFSEINVEG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F EIE L++ EID AVHS KD+PTKL L+++A + R + DV + L +LA Sbjct: 60 IFIREIEYALLAEEIDLAVHSFKDLPTKLPAELEVAAVVDRANRYDVLAGAENK-LAELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GT SLRRK+ LL +R D+ ++ RG IETRL K+ + ++LA AG++RL + Sbjct: 119 KGARLGTGSLRRKSQLLAYRPDLEIVPIRGNIETRLKKIKTHNLDGVILAAAGLERLGYK 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I E L E P+ QGA+ +E + K +E++K I E V E +FLAE++ Sbjct: 179 EQITEYLAPEICLPAARQGAVAVEIRKEDSKLKEILKTIETEKNNLEVWTEHSFLAEMEA 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDAAQYIRFI 299 C + +A A + TL V DG + ++ + ++ + A ++ Sbjct: 239 GCHAPVAAEAIIENKTLTLTAAVGEIDGSRIIKKVAKTKKLDLDSVRSLAQKLAVKVKQA 298 Query: 300 SNKNVF 305 + Sbjct: 299 GAAEII 304 >gi|319949783|ref|ZP_08023807.1| porphobilinogen deaminase [Dietzia cinnamea P4] gi|319436542|gb|EFV91638.1| porphobilinogen deaminase [Dietzia cinnamea P4] Length = 354 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 85/333 (25%), Positives = 143/333 (42%), Gaps = 35/333 (10%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + ++GTR S LA A R +L+ + ++ + T+GD + E G Sbjct: 1 MSSRTLKVGTRGSTLATTQAGHVRDALIAA----GYPAELVIVRTRGDVVM--APVERIG 54 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT E+ L G+ D AVHS KD+PT A PR D DV I+ +++ Sbjct: 55 VGVFTLELRAALERGDCDIAVHSYKDLPTARDDRFAPIAVPPRVDPSDVLIARDGLTMET 114 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTS+ RR++ L R D+ + RG I+TR+ + + A++LA AG+ R Sbjct: 115 LPQGARVGTSAPRRRSQLAALRPDLDLHPLRGNIDTRMGYVTSGDLDAVVLAAAGLDRTG 174 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I++ P+P QGA+ +E ++ +A + V++H + + ER L +L Sbjct: 175 AGERATHRFGIDEMLPAPAQGALAVEARADDTEAIAALAVVDHLPSRVRIAAERTLLRDL 234 Query: 241 DGSCKSAIAGFAYCKGST---------------------LYFYGIVLASDGKIFHEVSRN 279 + C + + A G+ L + +V A DG S Sbjct: 235 EAGCTAPVGARAELSGTDSARSDFAGTDPGADAPAADAVLTLHAVVAAHDGTTVLRTSGT 294 Query: 280 --------GNRCDAINIGRDAAQYIRFISNKNV 304 G A +GR A + ++ Sbjct: 295 TVPAEHPDGPVAAAEELGRRLAAELLDRGASDL 327 >gi|260061130|ref|YP_003194210.1| porphobilinogen deaminase [Robiginitalea biformata HTCC2501] gi|88785262|gb|EAR16431.1| porphobilinogen deaminase [Robiginitalea biformata HTCC2501] Length = 315 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 95/310 (30%), Positives = 141/310 (45%), Gaps = 20/310 (6%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIGTR S LAL A R L H ++P+ + GD + ++ L E+G G Sbjct: 2 SRALRIGTRDSELALWQAQTVRDRLEAA----GHRAELVPVKSTGDLVLDKPLYELGITG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT+ ++ L+ +ID AVHS KD+PT L +G+ +A L R RDV H D Sbjct: 58 IFTKTLDVALLREDIDLAVHSMKDVPTALPEGICQAAVLERASARDVL-VHKGLGFLDGP 116 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 I T SLRRKA L V RG + TRL L N + A AG++R+ Sbjct: 117 --GTIATGSLRRKAQWLNRYPAHQVTGLRGNVNTRLKLLRENSWDGAIFAQAGLERIGL- 173 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + ++ P+P QGA+ + ++ A+E + ++HE + V ER FL L+G Sbjct: 174 -LPDNAEPLDWMLPAPAQGAMLVVARTSDTAAREAARPLHHEQSALEVAVEREFLRTLEG 232 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR---------NGNR--CDAINIGRD 291 C + I + L+ G + + DGK V+R G+ DA G Sbjct: 233 GCSAPIGARVHAADGQLHLEGGLFSLDGKKAFRVTRHTGSLEAGGTGDARFQDAGEFGAA 292 Query: 292 AAQYIRFISN 301 A+ I Sbjct: 293 CAREILDSGG 302 >gi|153814114|ref|ZP_01966782.1| hypothetical protein RUMTOR_00323 [Ruminococcus torques ATCC 27756] gi|317499921|ref|ZP_07958157.1| porphobilinogen deaminase [Lachnospiraceae bacterium 8_1_57FAA] gi|331087856|ref|ZP_08336781.1| porphobilinogen deaminase [Lachnospiraceae bacterium 3_1_46FAA] gi|145848510|gb|EDK25428.1| hypothetical protein RUMTOR_00323 [Ruminococcus torques ATCC 27756] gi|316898638|gb|EFV20673.1| porphobilinogen deaminase [Lachnospiraceae bacterium 8_1_57FAA] gi|330409551|gb|EGG88992.1| porphobilinogen deaminase [Lachnospiraceae bacterium 3_1_46FAA] Length = 307 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 96/307 (31%), Positives = 149/307 (48%), Gaps = 9/307 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIG+R S LA+ A + + + + II + T GD+I +R+L +GGKG Sbjct: 2 QSVIRIGSRESRLAVKQAEIIKDQIRRCDQ--TILVEIITMKTTGDKILDRSLESVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+++ L G ID AVHS KDMP + I AY RED RDV I + + + Sbjct: 60 LFVKELDQALADGRIDLAVHSLKDMPMEESSEFPILAYSRREDPRDVLIYKSEKKEQGTE 119 Query: 123 LH-------SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 +VIGTSS RR + + + RG I+TRL+KLN + A +LA AG Sbjct: 120 EGSILTKTGAVIGTSSKRRMIQIQKLYPNAVFQGIRGNIQTRLSKLNKEEYDAAVLAAAG 179 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 +KRL E VI ++++ P+ GQG + ++ K + ++ + + ER+ Sbjct: 180 VKRLNMEAVIGRYFSVDEVIPAAGQGILAVQGRKEFLKDTVWRQYVDDKKSRVQALAERS 239 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 F+ LDG C S A +A KG+ L G+ + DA ++G A Sbjct: 240 FIRVLDGGCTSPSAAYAKVKGNELELTGLYYNEKSGQYFVKKAASYIEDASSLGERLALT 299 Query: 296 IRFISNK 302 ++ + Sbjct: 300 MKKQFGE 306 >gi|296168169|ref|ZP_06850190.1| hydroxymethylbilane synthase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896847|gb|EFG76476.1| hydroxymethylbilane synthase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 317 Score = 288 bits (738), Expect = 7e-76, Method: Composition-based stats. Identities = 95/308 (30%), Positives = 142/308 (46%), Gaps = 16/308 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H ++ ++T GDR + E G G FT Sbjct: 5 IRIGTRGSLLATTQAGVVRDALIAN----GHPAELVIITTAGDR--SSAPIETLGVGAFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + G +D AVHS KD+PT I+A PR D RDV ++ L +L S Sbjct: 59 TALREAINDGRVDAAVHSHKDLPTADDPRFTIAAIPPRNDPRDVVVARDGLVLGELPPGS 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + + Sbjct: 119 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDDV 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ +E + ++ ++ DT SV ERA LAEL+ C Sbjct: 179 TETLEPVQMLPAPAQGALAVECRAGDG-LAAVLAELDDADTRASVTAERALLAELEAGCS 237 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V A DG S G A +G A + Sbjct: 238 APVGAIAEVVESLDEEGRVFEELSLRGCVAALDGSDVIRASGIGTADRARELGVSVAAEL 297 Query: 297 RFISNKNV 304 + + + Sbjct: 298 FELGAREL 305 >gi|329903547|ref|ZP_08273542.1| Porphobilinogen deaminase [Oxalobacteraceae bacterium IMCC9480] gi|327548285|gb|EGF32978.1| Porphobilinogen deaminase [Oxalobacteraceae bacterium IMCC9480] Length = 280 Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 96/263 (36%), Positives = 145/263 (55%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 ++T+GD+I +RTL+++GGKGLF +E+E + G D AVHS KD+P +L G ++A+L Sbjct: 1 MTTRGDQILDRTLSKVGGKGLFVKELEVAIAEGRADLAVHSLKDVPMELPDGFMLAAFLE 60 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 RED RD F+S+ SL+ L +V+GTSSLRR+AL+ + + RG ++TRL KL+ Sbjct: 61 REDPRDAFVSNEYASLEALPAGAVVGTSSLRRQALIAARFPHLVIRPLRGNLDTRLGKLD 120 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 + AI+LA AG+KRL + I+ L E P+PGQGA+ IE L+ ++ Sbjct: 121 RGEYAAIILAAAGLKRLGVPERIRMALEPEHSLPAPGQGAMAIEIKAGRTDLAALLAPLD 180 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 H T +V ER GSC+ +A FA G L+ +V DG G Sbjct: 181 HLATARAVQAERTLSRAFGGSCQIPLAAFAVVDGDQLHLRAMVATPDGVRVASAEARGPA 240 Query: 283 CDAINIGRDAAQYIRFISNKNVF 305 + +G+ A +R + + Sbjct: 241 DNPEAVGQQVADALRGQDAEIIL 263 >gi|227541639|ref|ZP_03971688.1| porphobilinogen deaminase [Corynebacterium glucuronolyticum ATCC 51866] gi|227182607|gb|EEI63579.1| porphobilinogen deaminase [Corynebacterium glucuronolyticum ATCC 51866] Length = 290 Score = 288 bits (737), Expect = 9e-76, Method: Composition-based stats. Identities = 81/301 (26%), Positives = 142/301 (47%), Gaps = 13/301 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA A R +L+ ++ + ++T GD+ + + +IG G+F Sbjct: 2 TLRIGTRGSKLATTQAGHVRDALIRA----GYDAELTIITTPGDKNLS-PVQKIG-VGVF 55 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+ + + + EID AVHS KD+PT +GL Y RE + I+ +L L Sbjct: 56 TQALREAMDRDEIDIAVHSCKDLPTGQPEGLATI-YPVRETPCEALIARDGLTLDQLPEG 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT + RR + L R D+ + RG ++TR+ K+ + + A++LA+AG+ R+ + Sbjct: 115 AKVGTGAPRRISQLKALRPDLDIRPLRGNVDTRMGKVTSGELDAVILAHAGLTRIGRGDE 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ + P+P QG + +E+ + L I+ T S ERA L+ L C Sbjct: 175 ATQVFDPTYLMPAPAQGILAVESRTHVDAISTL---IDDHAT-LSAQAERAVLSTLQAGC 230 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A ++ G + A DG + G D + +G A+ +R + + Sbjct: 231 TAPLAAYSTVSGDEITLTAGAFALDGSKQIVETATGT--DPVALGTSVAEKLRACGAEEI 288 Query: 305 F 305 Sbjct: 289 I 289 >gi|312216693|emb|CBX96643.1| hypothetical protein [Leptosphaeria maculans] Length = 398 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 102/346 (29%), Positives = 146/346 (42%), Gaps = 47/346 (13%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG----G 60 P IGTR S LA A SL + H P I P+ +GDR L ++ Sbjct: 30 PINIGTRNSVLAQIQARAVERSLKEAH--PERTYNICPVVVQGDRDKTTPLQQLSRGENA 87 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS----HTAQ 116 K L+T E+E L SGE+D VH KDMPT+L L++ A L RED RD + Sbjct: 88 KSLWTGELESMLESGELDLIVHCLKDMPTQLPDNLELGAILEREDPRDALLISPRLPKET 147 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYA 174 +L L + IGTSS+RR A L + + D RG + TRL KL+ AI+LA A Sbjct: 148 TLATLPQGATIGTSSVRRSATLRKLFPHLKFADLRGNVGTRLAKLDAEDSPYSAIILAAA 207 Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 G+KR+ + I + L+ + GQGA+ IE + + L+ I E T + + Sbjct: 208 GLKRMGLDNRITQYLSSTSGGMLHAVGQGALGIEIRKGDESTKALLSKIRCERTTRACSA 267 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGS------------------------------TLYFY 262 ERA L L+G C I +G L Sbjct: 268 ERALLRTLEGGCSVPIGVETSWRGGRGLTTGAQPARDYDKHGNAVEEEEPHVDDQELVLR 327 Query: 263 GIVLASDGKIFHE---VSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +V++ DG E + + +A +GR+ A + + Sbjct: 328 TLVVSVDGTESVEYEVAQKVRSAEEAETMGREVALKLIEKGADKIL 373 >gi|47206204|emb|CAF91821.1| unnamed protein product [Tetraodon nigroviridis] Length = 385 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 107/378 (28%), Positives = 156/378 (41%), Gaps = 87/378 (23%) Query: 13 SPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKL 72 S LA L +++ P ++ I+ +ST GD+I + L++IG K LFT+E+E L Sbjct: 1 SQLARIQTDSVAEKLKELY--PDVHLEIVAMSTTGDKILDTALSKIGEKSLFTKELENAL 58 Query: 73 ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDLALHSVIGT 129 E+D VHS KD+PT L G I A L RE+ D + H ++L L HSVIGT Sbjct: 59 ERNEVDLVVHSLKDLPTSLPPGFTIGAVLKRENPHDAVVLHPKNAGKTLDALPAHSVIGT 118 Query: 130 SSLRRKALLLRWRSDISVIDF------------------------RGKIETRLNKLNNNK 165 SSLRR A L + + D RG + TRL KL+ + Sbjct: 119 SSLRRAAQLKKRFPHLDFKDIVSSERCFLPVQPGHRCFFLSSRSQRGNLNTRLKKLDEKE 178 Query: 166 -AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224 AI+LA AG++R+ + I +IL ED + GQGA+ +E + E+V V++ Sbjct: 179 DFAAIILAAAGLRRMGWDNRISQILEPEDCMYAVGQGALAVEVRAKDADILEMVSVLHDP 238 Query: 225 DTWDSVNCERAFLAEL----------------------------DGSCKSAIAGFAYCKG 256 DT ERAFL L +G C +A K Sbjct: 239 DTVLRCIAERAFLKHLVQHTHTHTHTHTHTRSLAVAHWNLFCLQEGGCSVPVAVHTKVKD 298 Query: 257 STLYFYGIVLASDGKIFHEVS--------RNGNRCD---------------------AIN 287 S LY G V + DG + + +G+ + A Sbjct: 299 SQLYLTGAVYSLDGSDSLKETMQTSVAAPADGSPDEVDECARVGVTANKIPGEAQDRAER 358 Query: 288 IGRDAAQYIRFISNKNVF 305 +G D A+ + K + Sbjct: 359 LGVDLAKLLLSKGAKEIL 376 >gi|221633109|ref|YP_002522334.1| porphobilinogen deaminase [Thermomicrobium roseum DSM 5159] gi|221155998|gb|ACM05125.1| porphobilinogen deaminase [Thermomicrobium roseum DSM 5159] Length = 560 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 110/293 (37%), Positives = 169/293 (57%), Gaps = 5/293 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RIG+R S LALA E L + +P ++ ++P+ T GDR +LT +GG Sbjct: 1 MAAR-IRIGSRGSTLALAQTEEVVERLRRL--VPECSVTVVPIVTTGDRDRATSLTVLGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F +E+ + L++G ID AVHSAKD+PT+L GL + A L RED RDV ++ + L + Sbjct: 58 SGVFAKELHEALLAGTIDLAVHSAKDLPTQLPPGLVLVAVLAREDARDVLVTSPPRKLGE 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSS RR+ALL R R D+ V+D RG ++TRL KL A++L AG++RL Sbjct: 118 LPAGARVGTSSRRRQALLQRARPDLIVVDIRGNVDTRLRKLREGIVDALVLGAAGLRRLS 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + ++ E L+ ++F P+PGQGA+ + ++ + EL+ ++ ++V ERAFLA Sbjct: 178 QADLVAEYLDPDEFVPAPGQGALAVVARESDGRL-ELLSRLDEPLVHEAVAVERAFLAAF 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 C + +A G+ L F VL DG+ F + R +AI R+ Sbjct: 237 GSGCSVPLGAYATIAGNRLRFRIAVLLPDGR-FISQCLDWPREEAIERARELG 288 >gi|160879927|ref|YP_001558895.1| porphobilinogen deaminase [Clostridium phytofermentans ISDg] gi|160428593|gb|ABX42156.1| porphobilinogen deaminase [Clostridium phytofermentans ISDg] Length = 301 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 89/305 (29%), Positives = 146/305 (47%), Gaps = 8/305 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+K+ +G+R S LA+ + P + ++ L T GD I +++L +IGG Sbjct: 1 MKKQKIVVGSRDSKLAVMQTELIMHEI--NRNNPEIELELVTLKTTGDLILDQSLDKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E++ L+ G ID AVHS KDMP + K L I A R D RDV + + Sbjct: 59 KGLFVKELDLALLDGRIDIAVHSLKDMPMEENKELPIVALPKRGDARDVLVLPKGCEFIE 118 Query: 121 LALHSV----IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 ++ IG+SS RRK + + RG + TRL+KL+ + +++LA AG+ Sbjct: 119 YEDMNLYYQNIGSSSARRKLQIQKLLPSAGTSGVRGNVITRLDKLDRGEYTSLILAAAGL 178 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 +R+ I ++E+ P+ GQG + I+ + + ++ I +T + ER+F Sbjct: 179 QRVGLPHRISHYFSVEEMIPAAGQGILSIQARRDLN--VDFLENIKDANTTYASLAERSF 236 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + LDG C S IA +A +G L G+ + ++ A +G A + Sbjct: 237 VRTLDGGCSSPIAAYAAVEGEELKLVGLYYNEKTTEHRVATVVDHKERAERVGEQLALRL 296 Query: 297 RFISN 301 R Sbjct: 297 RGEIG 301 >gi|54310580|ref|YP_131600.1| putative porphobilinogen deaminase [Photobacterium profundum SS9] gi|46915023|emb|CAG21798.1| putative porphobilinogen deaminase [Photobacterium profundum SS9] Length = 234 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 85/203 (41%), Positives = 122/203 (60%), Gaps = 2/203 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M KP RI TR SPLA+ A ++ L H P + ++P+ TKGD I + L ++GG Sbjct: 32 MTDKPIRIATRKSPLAMWQAEFVQAELEKAH--PSLVVELVPMVTKGDIILDTPLAKVGG 89 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+T S+ + Sbjct: 90 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNTYNSIAE 149 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+ RL+ Sbjct: 150 LPAGSIVGTSSLRRQCQLRAQRPDLIINDLRGNVNTRLRKLDEGQYDAIILACAGLMRLE 209 Query: 181 KEKVIKEILNIEDFPPSPGQGAI 203 I+ + E+ P+ GQGA Sbjct: 210 MHDRIRSAIEPEESLPAVGQGAG 232 >gi|149278622|ref|ZP_01884758.1| porphobilinogen deaminase [Pedobacter sp. BAL39] gi|149230617|gb|EDM36000.1| porphobilinogen deaminase [Pedobacter sp. BAL39] Length = 526 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 10/260 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K IGTR S LAL A + L ++ + + T+GD+I N L ++ GKG Sbjct: 2 KRLIIGTRGSDLALWQANFIKDRLAEIGA----EAELKIIKTQGDKILNLRLDKLEGKGF 57 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----QSLK 119 FT+E+E++L+ G ID AVHS KD+PT GL I+A RED ++ + + Sbjct: 58 FTKELEEELLGGTIDIAVHSHKDLPTTHPAGLTIAAVTEREDPSELLLILKDCVDIKQKL 117 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +++GTSS RRKA LL RSD+++ D RG + TR+ KL + AI+LA AG+ RL Sbjct: 118 SLKTGAMVGTSSNRRKAQLLALRSDLNIEDLRGNVPTRIQKLRDENYDAIVLAKAGVNRL 177 Query: 180 K--KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + E+++ + P+P QGA+ ++ N+ + L++ +NH+DT D + ER L Sbjct: 178 NIDLSEFHVEVIDPTEIVPAPAQGALAVQIRENDTELFALLQQLNHQDTIDEIAVERKVL 237 Query: 238 AELDGSCKSAIAGFAYCKGS 257 +G C + + + Sbjct: 238 NLFEGGCHMPLGCYCKKEEG 257 >gi|313901685|ref|ZP_07835116.1| porphobilinogen deaminase [Thermaerobacter subterraneus DSM 13965] gi|313468036|gb|EFR63519.1| porphobilinogen deaminase [Thermaerobacter subterraneus DSM 13965] Length = 362 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 105/326 (32%), Positives = 161/326 (49%), Gaps = 23/326 (7%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR S LA A L H P + ++P++T GDR +R L + Sbjct: 1 MTAAVLRIGTRASALARIQAQWVARQLETHH--PGLRVELVPVTTLGDRNRSRPLYALSS 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS--- 117 G F +E+E+ L+ G ID AVHSAKD+PT+L +GL+++A+ RED D + + Sbjct: 59 PGAFVKELEEALLEGRIDLAVHSAKDVPTRLPEGLELAAFPQREDPADALVIPRPATGRL 118 Query: 118 ------------------LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159 L L + +GTSSLRR+A L R D++V RG ++TRL Sbjct: 119 SVRGPGGEEPPGSEARDLLAALPPGARVGTSSLRRQAWLRARRPDLAVEPARGNLDTRLR 178 Query: 160 KLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219 +L+ A+LLA AG++RL I ++ + P+PGQGA+ +E + + V+ Sbjct: 179 RLDEGHWDALLLAAAGLRRLGFAGRISALVPPLELLPAPGQGALAVEIRAGDEAVRRRVQ 238 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 V++ + +V ERAFLAEL G+C+ + +A +G + G+V G + Sbjct: 239 VLDRPEVSRAVRAERAFLAELGGTCRVPLGAWARVQGGRIVIDGMVAGPAGSPWLSGRGE 298 Query: 280 GNRCDAINIGRDAAQYIRFISNKNVF 305 G+ D GR A+ + V Sbjct: 299 GSLSDPEGTGRRLAEQLLAKGAAGVL 324 >gi|242763889|ref|XP_002340664.1| hydroxymethylbilane synthase, putative [Talaromyces stipitatus ATCC 10500] gi|218723860|gb|EED23277.1| hydroxymethylbilane synthase, putative [Talaromyces stipitatus ATCC 10500] Length = 335 Score = 286 bits (733), Expect = 3e-75, Method: Composition-based stats. Identities = 99/320 (30%), Positives = 146/320 (45%), Gaps = 17/320 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+K F IGTR S LALA + +L + P + I T GDR ++ K Sbjct: 9 ERKTFNIGTRKSKLALAQTYMVVDALKK--EYPQYEFNIKSKDTAGDRDKITAFKDMQTK 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 L+TEE+E+ LI G++D VHS KD+PT L + LPRED RDV I SL Sbjct: 67 NLWTEELEELLIGGQLDFIVHSLKDVPTLLPPTCALGGVLPREDPRDVLIVKPGLPYTSL 126 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGI 176 ++ SV+GTSS+RR A L + V RG I+TRL KL+ I+LA AG+ Sbjct: 127 AEIPAGSVVGTSSIRRTAQLAMKFPHLKVQSLRGNIDTRLAKLDGEDSPYTCIILAAAGL 186 Query: 177 KRLKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R I + L+ + GQGAI IE ++ E++ + + T+ V ER Sbjct: 187 LRTGMGHRITQYLDSRSGSLLYAVGQGAIGIEVRSDDGLVLEMLNKVGDQKTFKEVLAER 246 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNG---NRCDAI 286 + L ++G C + + + L+ I+++ DGK + A Sbjct: 247 SLLRTIEGGCSAPLGVESEWINEVEGTTKLHVRSIIVSVDGKRHSTAELEKVIESAAAAE 306 Query: 287 NIGRDAAQYIRFISNKNVFN 306 G + AQ + + Sbjct: 307 TFGLELAQELIANGAGPILE 326 >gi|315049563|ref|XP_003174156.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893] gi|311342123|gb|EFR01326.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893] Length = 312 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 91/312 (29%), Positives = 141/312 (45%), Gaps = 33/312 (10%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA+ A RS L + P H I L T GD+ N L G K L+ Sbjct: 12 PLRIGTRRSNLAVIQAKTIRSQLEKI--APEHTFEIEALHTLGDKDQNSALYNFGAKDLW 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T E+E+ L SG++D VH KDMPT+L ++A R+D RD + SL+ L Sbjct: 70 TTELEELLTSGKLDIVVHCLKDMPTQLPDSCDLAAIPLRDDPRDALVIKAGLPYTSLQTL 129 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIKRL 179 +++GTSS+RR A L R + ++ RG +ETRL KL++ ++ I+++ G++ Sbjct: 130 PEGAIVGTSSVRRSAQLRRLFPHLRFMNIRGNVETRLAKLDDPKSEYICIVMSACGLE-- 187 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 GQGAI +E + K L + + + ER+ + Sbjct: 188 ------------------LGQGAIGLEVRKGDAKILRLTDQLLDHKSSLACLAERSLMRT 229 Query: 240 LDGSCKSAIAGFAYCKGS---TLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAA 293 L+G C I TL IV++ DG E + + + +A +G++ A Sbjct: 230 LEGGCSVPIGVETEWIDKPDATLRIRAIVVSIDGTQSVEDTTDTVVHTKEEATALGQELA 289 Query: 294 QYIRFISNKNVF 305 + + Sbjct: 290 ARLLEAGAAAIL 301 >gi|148554852|ref|YP_001262434.1| porphobilinogen deaminase [Sphingomonas wittichii RW1] gi|148500042|gb|ABQ68296.1| porphobilinogen deaminase [Sphingomonas wittichii RW1] Length = 308 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 109/291 (37%), Positives = 154/291 (52%), Gaps = 4/291 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +P R+GTR SPLAL A ++L H + I+ + T GDRI +R L E+GGK Sbjct: 6 SRPLRLGTRGSPLALTQARMVIAALRAAHGWDETAVEIVAIKTSGDRIQDRALAEVGGKA 65 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 L+T+E++ L G ID AVHS KD+ T + I+A LPR D+RD I A SL L Sbjct: 66 LWTKELDIALADGTIDFAVHSMKDVETIRPAAIVIAAMLPRADVRDRLIG--AASLAALP 123 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSS RR A + R R D+ ++ FRG ++TRL KL +A A LLA AG+ RL ++ Sbjct: 124 QGARVGTSSPRRSAQVRRARPDVGIVLFRGNVDTRLGKLAAGEAEATLLAGAGLIRLGRD 183 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ + IE+ P+P Q A+ IET + L+ I+ T SV+ ERA LA L Sbjct: 184 EIG-HPIPIEEMLPAPAQAAVGIETLAERTDVRALLGAIDDAPTNASVSAERALLAALGA 242 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-GNRCDAINIGRDA 292 C+S +A A G+ L ++ DG DA + Sbjct: 243 DCRSPVAALAVRSGAGLLLRAEIMTEDGSEHRSGEAMLFETGDAAALAHRL 293 >gi|189220198|ref|YP_001940838.1| Porphobilinogen deaminase [Methylacidiphilum infernorum V4] gi|189187056|gb|ACD84241.1| Porphobilinogen deaminase [Methylacidiphilum infernorum V4] Length = 298 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 109/299 (36%), Positives = 157/299 (52%), Gaps = 5/299 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 KP IG+R S LAL A SL + P +I I + T GD + + + +I +G+ Sbjct: 2 KPLIIGSRGSRLALIQAQLIVDSLKK--EYPLLDIQIRVIKTTGDHLEAQPIRDIDQRGI 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EIE KL+ GEID AVHS KD+ +L L I+A PRED RD +IS L Sbjct: 60 FTKEIENKLLEGEIDLAVHSLKDLQVELHPRLVIAAIPPREDPRDCWISLQHPHPSSLQA 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRLKKE 182 +++ T S RR LLR R D+ ++ RG +E+RL KL N + +LA AGIKRL + Sbjct: 120 GAIVVTGSPRRANQLLRKRPDLRIVPVRGNVESRLRKLRENRQWQGTVLALAGIKRLGID 179 Query: 183 --KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 L+++ P+PGQGA+ ++ + + Q LVK +N T +V ER FL EL Sbjct: 180 ISSFFCTPLSMDWMLPAPGQGALALQARIEDKHTQSLVKHLNDFSTACAVTAERVFLHEL 239 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G C++A+ A +GS L GI E G A ++G+ A ++ + Sbjct: 240 GGGCRTAVGARAEVEGSRLVLEGIWWPQQAIEPKEGKVVGEIHRAEDLGKKLADLLKNL 298 >gi|302521073|ref|ZP_07273415.1| porphobilinogen deaminase [Streptomyces sp. SPB78] gi|318061890|ref|ZP_07980611.1| porphobilinogen deaminase [Streptomyces sp. SA3_actG] gi|318078097|ref|ZP_07985429.1| porphobilinogen deaminase [Streptomyces sp. SA3_actF] gi|302429968|gb|EFL01784.1| porphobilinogen deaminase [Streptomyces sp. SPB78] Length = 323 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 90/297 (30%), Positives = 147/297 (49%), Gaps = 21/297 (7%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M KP R+GTR S LA+A + ++ + P + ++ ++T GD + L IGG Sbjct: 1 MTDKPLRLGTRRSKLAMAQSGLVADAVREATGRP---VELVEITTYGDT-SREHLARIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + L+ G++D AVHS KD+PT +GL ++A RED RD I+ +L+ Sbjct: 57 TGVFVTALRDALLRGDVDFAVHSLKDLPTAQPEGLALAAVPRREDPRDALIARDGLTLER 116 Query: 121 LALHSVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + IGT S RR A L DI + RG ++TR+N + + + A++LA AG+ Sbjct: 117 LPRGARIGTGSPRRMAQLNAHARAHGLDIETVPIRGNVDTRINFVRDGELDAVVLAAAGL 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 RL + + L + P+PGQGA+ +E E + ++ T +V ERA Sbjct: 177 NRLGRGGEVTAYLASDTVLPAPGQGALAVECPPG--PLAEALARLDDPRTRAAVTAERAL 234 Query: 237 LAELDGSCKSAIAGFAYCKG-----------STLYFYGIVLASDGKIFHEVSRNGNR 282 LA L+ C + + A G + + G+V ++DG +++ G+ Sbjct: 235 LATLEAGCSAPVGALADFTGAPQDQAAQRQTTEMRLRGVVGSTDGSELVQLTTTGHV 291 >gi|134055399|emb|CAK43953.1| unnamed protein product [Aspergillus niger] Length = 346 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 99/334 (29%), Positives = 143/334 (42%), Gaps = 30/334 (8%) Query: 1 MEKKP------FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT 54 M + R+GTR S LAL A L H P + +GD + Sbjct: 1 MSQNTTTTVQELRLGTRNSKLALVQAEHVSKELTSAH--PGVQFPWQTVVVRGDADKSSP 58 Query: 55 LTEIGG-----KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109 + G K ++TEE+E KL +GE+D VH KDMPT+L + + A + RED D Sbjct: 59 FLKFAGPSDAAKNIWTEEMETKLCAGELDLLVHCLKDMPTRLPETCTLGAIVYREDPTDA 118 Query: 110 FISH-----TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN- 163 + L L SV+GTSS RRKALL + V + RG + TRL KL++ Sbjct: 119 LVIKEGLRSQYTDLSQLPPGSVVGTSSTRRKALLRYRYPHLKVEECRGNLGTRLKKLDDP 178 Query: 164 -NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 AI+LA AG+ R+ E I + L +FP + GQGA+ IE + + + +V+ I Sbjct: 179 EGPFSAIILATAGMVRINLEDRITKRLPPSEFPYAVGQGALGIEIRKEDAQTKTMVRKIE 238 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG-------STLYFYGIVLASDGKIFHE 275 T ER+ L L G C S +A + + L G ++ G Sbjct: 239 DLVTRRICLAERSLLRTLQGGCSSPVAVHCTVEQAPTASSPAQLRLDGTIIHPHGTTLLS 298 Query: 276 VSRN---GNRCDAINIGRDAAQYIRFISNKNVFN 306 G DA +G AQ + + + Sbjct: 299 ERTTAEVGTDEDAEALGATVAQQLLKNGGQALLE 332 >gi|262341328|ref|YP_003284183.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272665|gb|ACY40573.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 309 Score = 286 bits (732), Expect = 4e-75, Method: Composition-based stats. Identities = 104/307 (33%), Positives = 149/307 (48%), Gaps = 9/307 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK RIGTR SPLA+ A + + L + + ++GD I N + + G Sbjct: 2 KKIIRIGTRNSPLAVFQAQKVQKLLKKEGYFSH----LFKIKSEGDLIQNVPIHALKHVG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-LKDL 121 +FT+++ ++SGEID AVHS KD+P L +G+ +SA+L RE D + + L D Sbjct: 58 VFTKKLTNIMLSGEIDMAVHSLKDVPINLPEGIILSAFLKRESFFDSLVYKGSSDFLYDP 117 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +H+VI T S+RR A +ID RG I TRL KL N+ L A G++RL Sbjct: 118 KIHAVIATGSIRRSAFWKNRYPHHGLIDLRGNINTRLKKLQNSSWKGALFAQVGLERLGI 177 Query: 182 EKVIK--EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 K ++ PSPGQG I + T L+K ++ +T S N ER FL Sbjct: 178 LNNFKCLNCKILDWMIPSPGQGIIVVSTLEKKDSINSLIKKLDDIETRLSANIERQFLKT 237 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L G C S I A K +YF G++L+ DG + +R G D IG A+ I Sbjct: 238 LGGGCISPIGAHAKIKNKIIYFTGMLLSLDGMHKIKKTRIGTNYD--LIGFQCAEEILKE 295 Query: 300 SNKNVFN 306 + + Sbjct: 296 GGREILE 302 >gi|304315023|ref|YP_003850170.1| porphobilinogen deaminase [Methanothermobacter marburgensis str. Marburg] gi|302588482|gb|ADL58857.1| porphobilinogen deaminase [Methanothermobacter marburgensis str. Marburg] Length = 289 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 94/288 (32%), Positives = 146/288 (50%), Gaps = 6/288 (2%) Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 GTR S LAL L ++ I + TKGDRI + L + +GLFT E+ Sbjct: 4 GTRGSRLALVQTDHVIDMLSEIC---GERIERRIIKTKGDRIKDSQLYSMDSRGLFTREL 60 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128 + ++ E+D AVHS KD+P+ L L I+A PRE +V +S +L + +G Sbjct: 61 DIAVLEEEVDFAVHSLKDVPSDLDPELVIAAVPPRESPNEVLVSR--FDWDELPPAAKLG 118 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188 TSSLRR+A + + + RG I+TR+ K+ + HA ++A AG+KRL E IK+ Sbjct: 119 TSSLRREAFCNHHQKNFKMEPLRGNIDTRIRKVMEGEVHATIMAEAGLKRLGLENYIKKR 178 Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248 +E F P+ GQGA+ + T + + ++ I H + V E+ L EL C+ + Sbjct: 179 FTLEYFTPAAGQGALAVITR-RDSELMVSIEKITHYPSHQEVTAEKTLLRELGAGCQCPL 237 Query: 249 AGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 A + Y ++L DG+I V+ G+ A IG+ AA+ + Sbjct: 238 GVIARASDGKINLYAVLLTRDGEILKRVNVKGSVDKAEEIGKKAAKEM 285 >gi|58040313|ref|YP_192277.1| porphobilinogen deaminase [Gluconobacter oxydans 621H] gi|58002727|gb|AAW61621.1| Porphobilinogen deaminase [Gluconobacter oxydans 621H] Length = 357 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 107/313 (34%), Positives = 159/313 (50%), Gaps = 9/313 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGG 60 K P R+G+R SPLAL + L + +ST+GDR + L EIGG Sbjct: 40 KLPLRVGSRASPLALVQTRNFLTRLTRFCPVLRDMGAFQEYQISTEGDRNLVQRLAEIGG 99 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EI + L +G ID AVHS KD+ T L GL ++ L RED RD I D Sbjct: 100 KGLFAKEIHEALAAGRIDFAVHSLKDLETNLPPGLVLACTLKREDARDALILRDRDVKVD 159 Query: 121 -------LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173 L ++IG +S+RR+A +L R D+ RG ++TRL+KL A LLA Sbjct: 160 PQRPYDCLPEGALIGCASVRRQAQMLHVRPDLRFCLLRGNVQTRLDKLRAGACEATLLAL 219 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG++RL E + +L + P+ GQG + + ++ + +EL+ I + E Sbjct: 220 AGLRRLGMEDRVDVVLEPDQMLPASGQGIVGVTVRESDLELRELLSAIEDPEARAVSTAE 279 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 RA LAELDGSC++ I G+A + L G++ + DG G +A +G + A Sbjct: 280 RALLAELDGSCRTPIGGYARIENGVLKLSGMIASEDGTFLLRREIEGAPLEAARLGTELA 339 Query: 294 QYIRFISNKNVFN 306 +R + ++F+ Sbjct: 340 DELRRDTPAHIFD 352 >gi|114640812|ref|XP_001149046.1| PREDICTED: porphobilinogen deaminase [Pan troglodytes] Length = 276 Score = 285 bits (731), Expect = 5e-75, Method: Composition-based stats. Identities = 90/243 (37%), Positives = 130/243 (53%), Gaps = 6/243 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA ++L + P II +ST GD+I + L++IG K L Sbjct: 19 RVIRVGTRKSQLARIQTDSVVTTLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 136 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 196 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 197 GWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRH 256 Query: 240 LDG 242 L G Sbjct: 257 LVG 259 >gi|227487191|ref|ZP_03917507.1| porphobilinogen deaminase [Corynebacterium glucuronolyticum ATCC 51867] gi|227092849|gb|EEI28161.1| porphobilinogen deaminase [Corynebacterium glucuronolyticum ATCC 51867] Length = 290 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 81/301 (26%), Positives = 142/301 (47%), Gaps = 13/301 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA A R +L+ ++ + ++T GD+ + + +IG G+F Sbjct: 2 TLRIGTRGSKLATTQAGHIRDALIRA----GYDAELTIITTPGDKNLS-PVQKIG-IGVF 55 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+ + + + EID AVHS KD+PT +GL Y RE + I+ +L L Sbjct: 56 TQALREAMDRDEIDIAVHSCKDLPTGQPEGLATI-YPVRETPCEALIARDGLTLDQLPEG 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT + RR + L R D+ + RG ++TR+ K+ + + A++LA+AG+ R+ + Sbjct: 115 AKVGTGAPRRISQLKALRPDLDIRPLRGNVDTRMGKVTSGELDAVILAHAGLTRIGRGDE 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ + P+P QG + +E+ + L I+ T S ERA L+ L C Sbjct: 175 ATQVFDPTYLMPAPAQGILAVESRTHVDAISTL---IDDHAT-LSAQAERAVLSTLQAGC 230 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A ++ G + A DG + G D + +G A+ +R + + Sbjct: 231 TAPLAAYSTVSGDEITLTAGAFALDGSKQIVETATGT--DPVALGTTVAEKLRARGAEEI 288 Query: 305 F 305 Sbjct: 289 I 289 >gi|189184545|ref|YP_001938330.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Ikeda] gi|238054423|sp|B3CUP9|HEM3_ORITI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189181316|dbj|BAG41096.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Ikeda] Length = 298 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 109/293 (37%), Positives = 163/293 (55%), Gaps = 7/293 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+G+R S LAL A + D+ N +IIP+ T GD I N+ L +IGGKGLF Sbjct: 2 IIRVGSRASRLALIQAQAVVQKINDLL---GLNAIIIPIKTTGDLIQNKNLYDIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE L++ ID AVHS KD+P L GLQ++A L R ++ D+ +S A + DL L Sbjct: 59 LKEIEYALLNNTIDIAVHSLKDVPAYLPDGLQLAAVLERGNVGDMLVSKIANKITDLPLG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183 + +GTSS+RR+ LLR R D++++ FRG ++TR NK+ NN+ A +LA AG++RL + Sbjct: 119 ARVGTSSVRRRIQLLRLRPDLNIVLFRGNVDTRWNKIFNNEVDATVLAAAGLQRLNYDTS 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I++ ++ P+ GQG I IE ++ L INH+ TW + ER +L L+ Sbjct: 179 RFCNIISQDEMLPAIGQGVIAIEARKDDKLIMPLCAKINHQLTWQLIQVERGYLKTLNAD 238 Query: 244 CKSAIAGFAYCKGSTLYFYG--IVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 C I G A G+ F ++ + + F G +IG +AA+ Sbjct: 239 CNVPIGGLANYIGNN-NFEAKFMLGDYNMRYFFYSEVCGKLQHGYDIGVEAAK 290 >gi|326388534|ref|ZP_08210128.1| porphobilinogen deaminase [Novosphingobium nitrogenifigens DSM 19370] gi|326206999|gb|EGD57822.1| porphobilinogen deaminase [Novosphingobium nitrogenifigens DSM 19370] Length = 309 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 111/281 (39%), Positives = 154/281 (54%), Gaps = 4/281 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR SPLA+A A ETR+ L H P + ++P+ GDRI +R L EIGGK L+T Sbjct: 1 MRLGTRQSPLAMAQAEETRARLCAAHGWPVDAVELVPVVASGDRIQDRPLAEIGGKALWT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ L G ID AVHS KD+ T + L I+A LPR D+RDV + A S+ D+ + Sbjct: 61 KELDAWLAEGTIDAAVHSMKDVETLRPETLTIAAVLPRADVRDVLVG--AASVADIPTGA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTS+ RR A +L R D++V+ FRG + TRL KL +A LLA AG+ RL + + Sbjct: 119 RVGTSAPRRAAQMLHARPDLTVVSFRGNVATRLGKLERGEADVTLLAAAGLVRLGETGIG 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ E + P+P QGAI IE L I+ T ++ ERA L L G+C Sbjct: 179 T-PLDAETWLPAPAQGAIGIECLAARADLLSLFAAIDDAPTHAAIRAERALLTGLGGTCH 237 Query: 246 SAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDA 285 S IA +G T L+ + + DG E S + Sbjct: 238 SPIAVLTRPEGDTELFLRAALFSPDGAHRVEASATFPMTEP 278 >gi|294496111|ref|YP_003542604.1| hydroxymethylbilane synthase [Methanohalophilus mahii DSM 5219] gi|292667110|gb|ADE36959.1| hydroxymethylbilane synthase [Methanohalophilus mahii DSM 5219] Length = 308 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 95/302 (31%), Positives = 155/302 (51%), Gaps = 8/302 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IGTR S LALA A L+D P + T GD T+R L E+ G G F Sbjct: 1 MIIGTRGSDLALAQAKTV-EGLLDSRGFPTTR---KIIKTSGDTFTDRPLHEVEGVGAFV 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E++ +++SGEID AVHS KD+PT+ L I+A + R+ D+ +++ +L +L + Sbjct: 57 RELDDRMLSGEIDIAVHSMKDLPTERPAELSIAAVIERDSPHDLLLTNDGSTLDELPEGA 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GT+S+RR+A LR+R D+ V D RG I TRL KL + AI+LA AG++R+ + Sbjct: 117 IVGTTSMRRRAQFLRYRPDLDVQDLRGNINTRLKKLESGMYDAIILAEAGLQRMGW-DIE 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ ++F PS QG I + T +A+ L I+H ++ + ER + +++G C Sbjct: 176 CHRLDGDNFCPSANQGTIAVVTLAGG-EAELLCSQIDHTESRIATEVERLVIRDVEGGCI 234 Query: 246 SAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 + FA G+ ++ +L+ DGK + + + + + K Sbjct: 235 VPVGSFAEFVDNGNKIHIRAEILSLDGKRDIRLDEIIPVDNYREHAEKLGKKLVAMGGKE 294 Query: 304 VF 305 + Sbjct: 295 LV 296 >gi|256810719|ref|YP_003128088.1| porphobilinogen deaminase [Methanocaldococcus fervens AG86] gi|256793919|gb|ACV24588.1| porphobilinogen deaminase [Methanocaldococcus fervens AG86] Length = 292 Score = 285 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 93/297 (31%), Positives = 146/297 (49%), Gaps = 12/297 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + L ++ +++ I + T GDR+ N+ L++IG G+FT Sbjct: 2 IRIGTRGSKLALYQANKVAELLKNL----GYDVEIKIIKTTGDRVLNKKLSDIG-IGVFT 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ +++ EID AVHS KD+PT + L + A L R+ D+ I + + Sbjct: 57 KELDLAMLNNEIDIAVHSLKDIPTIWNENLMVGAVLERDSYYDLLIWNKNVDFDE-NSEI 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +IGTSSLRR+A L + RG ++TRL KL + AI+L+ AGI RL + Sbjct: 116 IIGTSSLRRRAFLKFLYPNARFELLRGNVDTRLKKLKDGLYDAIVLSEAGIIRLGI-NLD 174 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + P+P QG I + ++ + +E++K INH+ T+ +CERA L + G C Sbjct: 175 DFNYKRLNILPAPAQGIIAVACKRDDEEIKEILKEINHKKTYLGSSCERAALNQFGGGCS 234 Query: 246 SAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIR 297 A L V+ D D AI +G++ + +R Sbjct: 235 VPFGALAVYDEKNEVLKLNAGVVIEDELKTASGEVKCKIDDIDKAIELGKNIGKKLR 291 >gi|72163131|ref|YP_290788.1| porphobilinogen deaminase [Thermobifida fusca YX] gi|123747085|sp|Q47LA7|HEM3_THEFY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|71916863|gb|AAZ56765.1| hydroxymethylbilane synthase [Thermobifida fusca YX] Length = 320 Score = 285 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 89/314 (28%), Positives = 151/314 (48%), Gaps = 13/314 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M P R+GTR S +A + L +P + ++ +++ GD IT LT++GG Sbjct: 1 MSTTPARLGTRRSTMATNQSRRVAEILTARTGVP---VELVLITSFGD-ITRAHLTQLGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + L++GE++ AVHS KD+PT +G+ ++A R+D RD + D Sbjct: 57 TGVFVSALRDALLAGEVEFAVHSLKDLPTAPTEGIVLAAVTERDDPRDALCARDGLKFAD 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT S RR A L R D+ + RG ETRL K+ + + A++LAYAG+ R+ Sbjct: 117 LPPGATVGTGSPRRVAQLAALRPDLRYVPIRGNAETRLGKVASGELDAVVLAYAGLHRVG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETH-VNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + ++ +++ P+PGQGA+ +E + + ++H T +V ER LAE Sbjct: 177 RLDDVTDVFDVDQVLPAPGQGALAVECRTADFTGPLRYLTAVDHLPTRAAVTAERVILAE 236 Query: 240 LDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-------AINIGRD 291 L+ C + + +A L V+A+DG + + A +GR Sbjct: 237 LEAGCAAPVGAYAEFVAEDRLRLRAAVVATDGSQAVRAEQTVTVTEFPDAVQAATALGRQ 296 Query: 292 AAQYIRFISNKNVF 305 A + + Sbjct: 297 LAHDMIEQGADQIV 310 >gi|308177931|ref|YP_003917337.1| hydroxymethylbilane synthase [Arthrobacter arilaitensis Re117] gi|307745394|emb|CBT76366.1| hydroxymethylbilane synthase [Arthrobacter arilaitensis Re117] Length = 324 Score = 285 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 98/320 (30%), Positives = 142/320 (44%), Gaps = 25/320 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 FR+GTR S LA L I ++ + + T+GD +T +L +GG G+F Sbjct: 5 FRVGTRGSALATTQTGWAAQKLA---GISGLDVETVLVKTEGDVVTG-SLATLGGTGVFA 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + L+ D AVHS KD+PT +GL ++A RED+RD S + L L + Sbjct: 61 AALRQHLLDAGCDLAVHSLKDLPTAQPEGLVLAAIPAREDVRDALCSRDSLGLDQLPHGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN---------------NNKAHAIL 170 IGT S RR A LL +RSD ++D RG + TRL ++ A++ Sbjct: 121 KIGTGSPRRAAQLLAYRSDFEIVDIRGNVPTRLGRVKGVGKTLDDGSVGRSTQGDLDAVI 180 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH---VNNPKAQELVKVINHEDTW 227 LA AG++RL E I E L+ P+PGQGA+ +ET + + + T Sbjct: 181 LAAAGMRRLGLEDHITEYLDPSIMLPAPGQGALALETRSAGSGHQALDAALSQFDDAHTR 240 Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN---GNRCD 284 V ERA L+ L+ C + I A+ G L + DG S Sbjct: 241 MQVEAERALLSTLEAGCAAPIGALAHIDGDDLVLEAVACNPDGSETMRRSARIACSTTDA 300 Query: 285 AINIGRDAAQYIRFISNKNV 304 A +GR AQ + V Sbjct: 301 AQQLGRSLAQSMIADGAAVV 320 >gi|325960061|ref|YP_004291527.1| porphobilinogen deaminase [Methanobacterium sp. AL-21] gi|325331493|gb|ADZ10555.1| Porphobilinogen deaminase [Methanobacterium sp. AL-21] Length = 290 Score = 285 bits (729), Expect = 8e-75, Method: Composition-based stats. Identities = 91/291 (31%), Positives = 149/291 (51%), Gaps = 6/291 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++GTR S LA + L V I + + + GD+I N L I KG+FT Sbjct: 1 MKVGTRGSSLATYQTKTIINELSIVT---DEKIDVEIIKSTGDKIQNSQLYNIDAKGIFT 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E++ ++ G +D AVHS KD+PT+L L+I A RE +V +S +L + Sbjct: 58 RELDDAVLDGTVDFAVHSLKDLPTELEGDLEIVAVPERESPNEVLVSKLG--WDELPKGA 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS+RR+A + ++ RG I+TR+ K+ + + A ++A AG+ RL + I Sbjct: 116 TVGTSSIRREAFCNHHDKEFNIKPIRGNIDTRIKKVFSGEYDATIMAEAGLNRLGLTEYI 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 K+ +IE F P+ GQGAI + + ++ ++ INH ++ V E+ L E+ C+ Sbjct: 176 KQRFSIEYFTPAAGQGAIAVVARS-DSDVKDDLQKINHLKSFQEVTAEKRVLLEMGVGCQ 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 S + A + L ++L +GKI V G+ A N+G AA+ + Sbjct: 235 SPLGVSARINENKLKLCAVLLTQEGKIVSRVMVEGSADKASNLGLKAAKLM 285 >gi|297618662|ref|YP_003706767.1| porphobilinogen deaminase [Methanococcus voltae A3] gi|297377639|gb|ADI35794.1| porphobilinogen deaminase [Methanococcus voltae A3] Length = 316 Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 94/305 (30%), Positives = 149/305 (48%), Gaps = 14/305 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSL-MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR S LA+ L ++ + II + T GD+ N+ L ++G G+ Sbjct: 4 TIRIGTRGSKLAMVQTNYVNEILNKEIQTNKDIDTEIIKIKTVGDKDQNKKLVDLG-LGV 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+K ++ E D AVHS KD+PT L I A PRE D+ I + L Sbjct: 63 FTKEIDKSMLLNETDIAVHSLKDVPTLWSDELIIKAVPPRESYNDLLIWKKNRKLNVFQD 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 V+GTSS+RR A L ++ V RG ++TRL KL++ + AI++A AG+ RL Sbjct: 123 DIVVGTSSIRRAAFLEIRYPNLDVKLLRGNVQTRLKKLDDEEYDAIIMAEAGLNRLNI-N 181 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + + + P+P QGAI I T + + E+V++++ + T V ER L E G Sbjct: 182 LEDYNYEVLNMLPAPAQGAIGIATRKADEEINEIVELLDDKKTHLEVLAERNALKEYGGG 241 Query: 244 CKSAIAGFAYCKGST--LYFYG-IVLASDGKIFHEVSRNG-------NRCDAINIGRDAA 293 C++ A L +V ++GK VS+ G + A ++G++ Sbjct: 242 CQAPFGALAVYDEEENVLSLTCDLVFEANGKNVL-VSKEGFVYCDIDDFEKAADLGKNLG 300 Query: 294 QYIRF 298 + ++ Sbjct: 301 KLLKS 305 >gi|227549755|ref|ZP_03979804.1| porphobilinogen deaminase [Corynebacterium lipophiloflavum DSM 44291] gi|227078141|gb|EEI16104.1| porphobilinogen deaminase [Corynebacterium lipophiloflavum DSM 44291] Length = 301 Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 87/305 (28%), Positives = 141/305 (46%), Gaps = 13/305 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IGTR S LA A R ++ H+ + ++T GD ++ E G G+FT Sbjct: 2 LHIGTRGSHLATTQAGHVRDDIIAA----GHDAELTIVTTPGD--LSQAPVERIGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + L GE++ AVHS KD+PT + RED R+ I+ L DL + Sbjct: 56 SALRDALFRGEVEIAVHSFKDLPTA-DEPRAHIVVPAREDNREALIARDGMQLADLPQGA 114 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTS+ RR + L R D+ + RG IE+R+ ++ + + AI+LAYAG+ R Sbjct: 115 RVGTSAPRRISQLKALRPDLDIRPLRGNIESRMGRVTSGELDAIVLAYAGLLRAGYGDRA 174 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ + +F P+P QGA+ +E ++ + + ++ + T V+ ER LA L+ C Sbjct: 175 TQLFDASEFLPAPAQGALAVECRSDDAETRAVLDPLMDAATALQVSAERHVLATLEAGCT 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD------AINIGRDAAQYIRFI 299 + +A A+ G L V A DG S + D A +GR+ A + Sbjct: 235 APVAAHAFYDGGELSLRAGVFALDGSHQLVESGSVTVADTLDREAARGLGRELASRLLDA 294 Query: 300 SNKNV 304 + Sbjct: 295 GAAEL 299 >gi|145525120|ref|XP_001448382.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124415926|emb|CAK80985.1| unnamed protein product [Paramecium tetraurelia] Length = 306 Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 92/309 (29%), Positives = 151/309 (48%), Gaps = 15/309 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTK-GDRITNRTLTEIGGK 61 ++ RI TR S LA+A S L II +S + GD L ++ Sbjct: 2 QRQLRIATRSSALAMAQTNYVISELKQ-------ECEIIKVSNEVGDVNLQDPLYQMPTV 54 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118 G+FT+++E+ L+ + D AVHS KD+PT + L ++AY E DV + + +SL Sbjct: 55 GVFTKQVEQYLLEQKADVAVHSLKDLPTIIDAQLHLAAYTKFEQRGDVVLLNKKYNYKSL 114 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L +GTSSLRR A + +++I+ RG + TR+ KL+ + AI+LA AGI R Sbjct: 115 SELPDGLKVGTSSLRRIATIRSRYPKLNLINIRGNLNTRIQKLDEGQYDAIILAKAGILR 174 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + I L+ ++F +P Q A+ I+ ++ + ++++N D ER FL Sbjct: 175 LGLAEKISFDLDEKEFLYAPAQAALGIQCRKDDLETIGRLQILNDTDAQKRCVAERMFLN 234 Query: 239 ELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L+G C+ IA ++ C + +Y G VLA DG E +G+ + I+ Sbjct: 235 LLEGGCRLPIAVYSECREDGQVYIKGRVLAVDGSKVIEDEA---LDHFEIVGQILCEKIK 291 Query: 298 FISNKNVFN 306 + + Sbjct: 292 VLGGVELIE 300 >gi|261402865|ref|YP_003247089.1| porphobilinogen deaminase [Methanocaldococcus vulcanius M7] gi|261369858|gb|ACX72607.1| porphobilinogen deaminase [Methanocaldococcus vulcanius M7] Length = 295 Score = 284 bits (728), Expect = 9e-75, Method: Composition-based stats. Identities = 98/302 (32%), Positives = 151/302 (50%), Gaps = 14/302 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + L ++ + + II T GD+I N+ L+EIG G+FT Sbjct: 2 LRIGTRGSKLALYQANKVAELLKNL----GYEVEIIIKKTTGDKILNKKLSEIG-IGVFT 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ L++ EID AVHS KD+PT + L I A L R+ D+ I + L +L Sbjct: 57 KELDLALMNNEIDIAVHSFKDVPTIWNENLMIGAVLERDSYYDLIIWDKNKDL-ELDKEI 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS+RR++ L ++ RG ++TRL KL + AI+L+ AGI RL + Sbjct: 116 TVGTSSIRRRSFLKAMYPNVKFKLLRGNVDTRLKKLKEGQYDAIVLSEAGIIRLNIDLSD 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ PSP QG I + ++ K +++++ INH+ T+ CER L E G C Sbjct: 176 FNYRRLDI-TPSPAQGVIAVACRRDDNKIKKILERINHKKTFLECLCERTALNEFGGGCS 234 Query: 246 SAIAGFAYCKGST--LYFYGIVLASDGKIFH-EVSRNGNRCD---AINIGRDAAQYIRFI 299 + L V +GK+ H N D AI +G+ + ++ + Sbjct: 235 VPFGALSIYDEDKKILTLKATVF-LNGKLKHASGKINCEIDDLDSAITLGKTIGKRLKDL 293 Query: 300 SN 301 N Sbjct: 294 EN 295 >gi|21227846|ref|NP_633768.1| porphobilinogen deaminase [Methanosarcina mazei Go1] gi|23821683|sp|Q8PW57|HEM3_METMA RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|20906258|gb|AAM31440.1| Porphobilinogen deaminase [Methanosarcina mazei Go1] Length = 316 Score = 284 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 98/300 (32%), Positives = 149/300 (49%), Gaps = 9/300 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI-GGKGLF 64 IGTR S LALA L + I + T GDR T+R L + GG G F Sbjct: 1 MIIGTRGSQLALAQTENVARLLKEK----GVETSIKIIKTSGDRFTDRPLHAVSGGVGAF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 E++ +++GEID AVHS KDMPT K + A L R+ D+ +++ L +L Sbjct: 57 VRELDDVMLAGEIDIAVHSMKDMPTIRPKAIPTVAVLKRDTPFDILLTYDGTPLDELPEQ 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S+IGTSSLRR A + R+R DI + RG I+TRL KL + I+LA AG++R+ E + Sbjct: 117 SIIGTSSLRRTAQIRRYRPDIITQNLRGNIDTRLRKLREGQYDGIMLAKAGLERMGWE-I 175 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 EI + + F PSP QG + + T +A+ V +++H ++ ER +AEL G C Sbjct: 176 EGEIFSPDFFCPSPNQGTVAVVTREG-TEAEAAVSMLDHTESRIVTEIERILIAELGGGC 234 Query: 245 KSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 + + +A ++ VL+ DG+ + I R+ + + + Sbjct: 235 TTPVGSYAEITPDRQEIHVRAEVLSLDGREAIRIDEFIPLRGGIEKARELGHRLVEMGGR 294 >gi|169614115|ref|XP_001800474.1| hypothetical protein SNOG_10192 [Phaeosphaeria nodorum SN15] gi|111061407|gb|EAT82527.1| hypothetical protein SNOG_10192 [Phaeosphaeria nodorum SN15] Length = 397 Score = 284 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 102/346 (29%), Positives = 150/346 (43%), Gaps = 47/346 (13%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG----G 60 P IGTR S LA A ++L H P I P+ +GDR L ++ Sbjct: 30 PVNIGTRNSTLAQIQARAVAAALKSAH--PERTYNICPVVVEGDRDKITPLQQLSQGENA 87 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS----HTAQ 116 K L+T E+E L G++D VH KDMPT+L L++ A L RED RD + Sbjct: 88 KSLWTGELETMLEKGDLDIIVHCLKDMPTQLPDNLELGAILEREDPRDALLISPRLPGDT 147 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYA 174 +L L + IGTSS+RR A L R + D RG + TRL KL+ AI+LA A Sbjct: 148 TLATLPQGATIGTSSVRRAAQLRRLYPHLQFADLRGNVGTRLGKLDKEDSPYSAIILAAA 207 Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 G++R+ E I + L+ + GQGA+ IE ++ + L+ I E T + + Sbjct: 208 GLRRMGLESRITQYLDSATGGMLHAVGQGALAIEIRKDDETMKALLNKIACERTTRACSA 267 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGS------------------------------TLYFY 262 ERA L L+G C I +G L Sbjct: 268 ERALLRALEGGCSVPIGIETSWRGGKGLAVGAQPAKDYDKHGNAVEEAEPDLDDQELVMK 327 Query: 263 GIVLASDGKIFHE---VSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +V++ DGK E V + ++ +A +GR+ A+ + + Sbjct: 328 TMVVSVDGKDAVEHDAVRKVRSKEEAEEMGREVAKILIEKGADQIL 373 >gi|163814461|ref|ZP_02205850.1| hypothetical protein COPEUT_00612 [Coprococcus eutactus ATCC 27759] gi|158450096|gb|EDP27091.1| hypothetical protein COPEUT_00612 [Coprococcus eutactus ATCC 27759] Length = 350 Score = 284 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 104/311 (33%), Positives = 164/311 (52%), Gaps = 28/311 (9%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +KK ++GTR S LALA +L + + P + ++ +ST+GDR T+R L E GGK Sbjct: 38 QKKTVKVGTRGSKLALAQTELVIKALNE--RFPQIDFQMVTMSTRGDRDTSRALLEFGGK 95 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 +F EE E+ ++ G+ID AVHSAKDMP ++++GL IS LPR +DVFI + +S D Sbjct: 96 AVFVEEFEEAILKGDIDIAVHSAKDMPMEIMEGLTISGTLPRACPQDVFIYKSGRSF-DR 154 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK- 180 V+GTSSLRR+ + + + RG + TR+ KL + + AI+LA AG++RL Sbjct: 155 NDSFVVGTSSLRRQYQIRDMYPNAVCKNLRGNVGTRIQKLEDGEYDAIILAAAGLERLGV 214 Query: 181 ---------------KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED 225 K+++ L+ E P+ QG I IET + +A ++V+ IN + Sbjct: 215 IEDKGNDSTECFEVHKDELTFRYLSTESMLPAACQGIIAIETRTSG-EAYDMVRAINDTE 273 Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGI---VLASDGK-----IFHEVS 277 + + CERA L+ L+ C I ++ KG + + +SD + H + Sbjct: 274 AYTQLTCERAVLSRLNAGCHEPIGVYSELKGKHMKLSLMKVDAASSDKEKDEEIQIHRKT 333 Query: 278 RNGNRCDAINI 288 GN + + Sbjct: 334 VEGNTSEWEQL 344 >gi|83308731|emb|CAJ01641.1| porphobilinogen deaminase (ec 4.3.1.8) [Methylocapsa acidiphila] Length = 293 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 122/292 (41%), Positives = 169/292 (57%) Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74 +ALA A E R L +I I I+ + T GD I +R L+E GGKGLFT+E++ L+ Sbjct: 1 MALAQAHELRGRLAASSRIDGDAIEIVVIKTSGDVIQDRALSEAGGKGLFTKELDFALMR 60 Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRR 134 GE+D AVHSAKD+PT L + I+ YLPRED+RD +IS A +L +V+GT+SLRR Sbjct: 61 GEVDIAVHSAKDLPTSLPGEIAIAGYLPREDVRDAWISPKAAHPLELPAGAVVGTASLRR 120 Query: 135 KALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDF 194 A++ R R D+S++ RG +ETRL KL + A LLA AG+KRL E +L+ +F Sbjct: 121 GAMVKRLRPDLSIVLLRGNVETRLGKLAAGEVDATLLALAGLKRLGLEDRATAVLDAGEF 180 Query: 195 PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254 P+ GQGAI I + A + + + T ++ ERAFL LDGSCK+ I A Sbjct: 181 VPAAGQGAIAITLRAGDQAALDALAPVLDAATGAALAAERAFLHVLDGSCKTPIGAHARL 240 Query: 255 KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 G + F+G+VL DG F EV +G+ +A +G A +R F Sbjct: 241 AGDEINFHGVVLKPDGSQFFEVVLSGSAREAAALGAAAGDDVRARLPAAFFE 292 >gi|114568594|ref|YP_755274.1| porphobilinogen deaminase [Maricaulis maris MCS10] gi|114339056|gb|ABI64336.1| porphobilinogen deaminase [Maricaulis maris MCS10] Length = 321 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 12/305 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV----IIPLSTKGDRITNRTLTEI 58 +P I TR SPLAL A + ++ L + + I+ L + GDRI +RTL E Sbjct: 5 SRPLAIATRRSPLALVQARDVQAKLAAQCGLSGEDAERCFPILGLVSTGDRIQDRTLIEA 64 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS- 117 GGKGLFT+EI++ + G AVHS KD+PT L G+ + A L RED RD+ I+ ++ Sbjct: 65 GGKGLFTKEIDEAQLDGRAAFAVHSMKDVPTVLPDGIVLGALLEREDPRDMLIARDGETR 124 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L DL IGT+SLRR+A LL R D+ V+ RG ++TRL KL + HA LA AG+ Sbjct: 125 LADLPEGVTIGTASLRRQAQLLHKRPDLHVVPLRGNVDTRLGKLADGGIHATFLARAGLN 184 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL + + +++ L ++ P+ QGA+ + + +A V ++H DT +V ERAFL Sbjct: 185 RLGRAEALRDPLEADEMLPAAAQGAVGVAIRDGDEEAASYVAGLHHRDTELAVLAERAFL 244 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-----GNRCDAINIGRDA 292 ELDGSC++ IA ++ F G VL DG+ A G+D Sbjct: 245 FELDGSCRTPIAAH--VNKVSMDFIGEVLTPDGQQSWRRQIRFDMTHATPDSARQAGQDL 302 Query: 293 AQYIR 297 + +R Sbjct: 303 GRAVR 307 >gi|146296661|ref|YP_001180432.1| porphobilinogen deaminase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|254800238|sp|A4XK06|HEM3_CALS8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|145410237|gb|ABP67241.1| hydroxymethylbilane synthase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 290 Score = 283 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 98/295 (33%), Positives = 150/295 (50%), Gaps = 6/295 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIG R S L+ + +P+ TKGD ++L + G+ Sbjct: 2 KKLRIGARDSKLSRIQVDIVARKIKQTL---GIECEFVPIKTKGDIDKTKSLKDFKSPGV 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L+S EID AVHS KD+P ++ +I A + RED RDV +S L Sbjct: 59 FVKEIELALLSREIDLAVHSLKDLPCEMDSNFEIVAVVEREDPRDVLVSKDGVGFYQLKP 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++ IGTSSLRR+ L R DI V++ RG IETRL+K+ + ++LAYA +KRL + Sbjct: 119 NAKIGTSSLRREVHLKNLRQDIQVVNIRGNIETRLSKIESEGLDGVVLAYAALKRLNLDS 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + I ++ + P PGQGAICIE ++P + ++ IN D + ER L L G Sbjct: 179 HVSYIFDVNEITPCPGQGAICIECLKDSPY-KNILSKINDADAYIQTQFERLVLKFLGGG 237 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C S+I F +Y + +L+ D + S G++ D +++ + ++ Sbjct: 238 CHSSIGVFCKTDQDKIYAFASILSGD--KLIKASIEGDKDDFLSLANKLSNMLKS 290 >gi|147920614|ref|YP_685587.1| porphobilinogen deaminase [uncultured methanogenic archaeon RC-I] gi|121683115|sp|Q0W5T2|HEM3_UNCMA RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|110620983|emb|CAJ36261.1| porphobilinogen deaminase [uncultured methanogenic archaeon RC-I] Length = 303 Score = 283 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 103/296 (34%), Positives = 142/296 (47%), Gaps = 6/296 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LALA A + R L + I + T GD + L + G G F Sbjct: 1 MRIGTRGSKLALAQAEKVRRLLKEQ----GVEATITVIKTSGDVQKDSPLYMMKGYGAFV 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EI+ L+ E+D AVHS KD+PT + L +A L RE DV + A+ L DL + Sbjct: 57 REIDDLLLKNEVDLAVHSLKDIPTVRPENLVTAAVLKRESALDVAVIRNAERLADLPEGA 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSS RR A++ R + D RG ++TRL KL + + AILLA AG+ RL + Sbjct: 117 VVGTSSTRRAAMIYRHYPGLVTKDIRGNVDTRLRKLRDGEYDAILLAEAGLIRLGL-DLK 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ +F P+ QG I I P+A E+VK +N E TW ER A LDG C Sbjct: 176 VERLDPYNFVPAANQGVIAIVARQGTPEA-EVVKELNDETTWIETRVERIIAAGLDGGCV 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 + +A G + G VL+ DG+ V + ++ + Sbjct: 235 VPMGVYATRVGDEIDVIGEVLSLDGRQQVRVRETIPVAGCEEHAKQVSEKLVLAGG 290 >gi|20094183|ref|NP_614030.1| porphobilinogen deaminase [Methanopyrus kandleri AV19] gi|19887202|gb|AAM01960.1| Porphobilinogen deaminase [Methanopyrus kandleri AV19] Length = 305 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 84/297 (28%), Positives = 148/297 (49%), Gaps = 3/297 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+ TR S LA+ E L + I+ ++GD + +R L ++G KG+F Sbjct: 11 TIRVATRSSRLAIIQTREVIELLERESPR-DVEVEIVKTKSRGDVVRDRPLHKLGEKGVF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+++ ++ G+ D AVHSAKD+P+ + + ++A PR D R+ +S LK+L Sbjct: 70 VKEVDRLVLEGKADIAVHSAKDVPSVVDYPVDVAAVPPRRDPRECLVSRHG-GLKELPRG 128 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSS RR+A +L R D+ V RG ++TR++K+ + A +LA G+ RL Sbjct: 129 ATVGTSSPRRRAQILLERPDLKVEPMRGNVDTRVSKVRRREYDAAVLAKVGLDRLGMTSE 188 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E+ + E+F P GQGA+ I ++ + + L++V++ E + V E+A + EL C Sbjct: 189 VSEVYDPEEFVPPAGQGALMITCRKDDDRVKRLLEVVDDEKSRVEVETEKAVVRELGVGC 248 Query: 245 KSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 + G + + DG H + G+ D + A+ + Sbjct: 249 SEPVGVHVRARDGDHVRLVLGLFEEDGSCGHVLKMRGSPEDVVREAVSQAREVLSDG 305 >gi|307826350|ref|ZP_07656554.1| porphobilinogen deaminase [Methylobacter tundripaludum SV96] gi|307732591|gb|EFO03464.1| porphobilinogen deaminase [Methylobacter tundripaludum SV96] Length = 321 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 83/209 (39%), Positives = 125/209 (59%), Gaps = 2/209 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 + +K RI TR SPLAL A L P ++ ++T+GD+I + L +IGG Sbjct: 6 LTEKIIRIATRRSPLALWQAEHVAERLER--TFPGCRTELVKMTTQGDKILDAPLAKIGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P + +GL ++A L RED D F+S+ +L D Sbjct: 64 KGLFVKELEQGMLEGLADIAVHSMKDVPVEFPEGLHLAAILIREDPTDAFVSNHYATLHD 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++ IGTSSLRR+ + + ++ RG + TRL+KL++ + AI+LA AG+KRL Sbjct: 124 LPANARIGTSSLRRQCQIKELYPEAEILSLRGNVNTRLSKLDSGEYDAIILASAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHV 209 + I + L+ P+ GQGAI IE + Sbjct: 184 MAERITQCLDTSVSLPAIGQGAIGIECRI 212 >gi|158518657|sp|Q8TXC8|HEM3_METKA RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 298 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 85/301 (28%), Positives = 150/301 (49%), Gaps = 4/301 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + R+ TR S LA+ E L + I+ ++GD + +R L ++G Sbjct: 1 MSE-TIRVATRSSRLAIIQTREVIELLERESPR-DVEVEIVKTKSRGDVVRDRPLHKLGE 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG+F +E+++ ++ G+ D AVHSAKD+P+ + + ++A PR D R+ +S LK+ Sbjct: 59 KGVFVKEVDRLVLEGKADIAVHSAKDVPSVVDYPVDVAAVPPRRDPRECLVSRHG-GLKE 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSS RR+A +L R D+ V RG ++TR++K+ + A +LA G+ RL Sbjct: 118 LPRGATVGTSSPRRRAQILLERPDLKVEPMRGNVDTRVSKVRRREYDAAVLAKVGLDRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + E+ + E+F P GQGA+ I ++ + + L++V++ E + V E+A + EL Sbjct: 178 MTSEVSEVYDPEEFVPPAGQGALMITCRKDDDRVKRLLEVVDDEKSRVEVETEKAVVREL 237 Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 C + G + + DG H + G+ D + A+ + Sbjct: 238 GVGCSEPVGVHVRARDGDHVRLVLGLFEEDGSCGHVLKMRGSPEDVVREAVSQAREVLSD 297 Query: 300 S 300 Sbjct: 298 G 298 >gi|119871570|ref|YP_929577.1| porphobilinogen deaminase [Pyrobaculum islandicum DSM 4184] gi|158512988|sp|A1RQK2|HEM3_PYRIL RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|119672978|gb|ABL87234.1| hydroxymethylbilane synthase [Pyrobaculum islandicum DSM 4184] Length = 301 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 97/301 (32%), Positives = 149/301 (49%), Gaps = 9/301 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+ TR S L+L E + + V P I+ + T GD I ++ L +IG KG+F Sbjct: 2 KIRVATRGSKLSLIQTEELLAQIKAVE--PDVQFEIVVVKTTGDLIQDKPLFQIGVKGIF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ ++ GE D AVHS KD+P++L GL ++ + R DV IS +L+ L Sbjct: 60 EKEVNLAVLRGEADMAVHSLKDLPSELTPGLVLAGFSKRAPPHDVLISRGGYTLETLPKG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSS+RR L R D+ V RG ++TR+ K+ + + A ++A AG++RL Sbjct: 120 AVVGTSSVRRAEFLKAVRPDVEVKPLRGNVDTRVGKVLSGQYDAAVMAAAGLQRLYGSSP 179 Query: 185 IKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I+ +E+ PP PGQG + + +L+K + + ERAFLA + Sbjct: 180 PVSIVPLRVEEVPPPPGQGIVVAVVKEEDSWLIDLLKKASDKTAAIEATAERAFLAGVGA 239 Query: 243 SCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C AI G A +L F A G + V G D + +G+ AAQ I + Sbjct: 240 GCHVAIGGVAKLTPQGSLEFTAGYAA--GGAKYVVKVFG--EDPVEVGKRAAQLIAEVRQ 295 Query: 302 K 302 K Sbjct: 296 K 296 >gi|294085042|ref|YP_003551802.1| porphobilinogen deaminase [Candidatus Puniceispirillum marinum IMCC1322] gi|292664617|gb|ADE39718.1| porphobilinogen deaminase [Candidatus Puniceispirillum marinum IMCC1322] Length = 347 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 108/313 (34%), Positives = 158/313 (50%), Gaps = 20/313 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P + +R S LA+A A R +L V I P +TKGD I +R L E+GGKG+F Sbjct: 42 PLVLASRASTLAMAQAELVRVALKPVASR------IEPFTTKGDLILDRPLVEVGGKGVF 95 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E+ L++GE D AVHS KDM + G I A LPRED RD + + L L Sbjct: 96 IKELERSLLAGESDAAVHSMKDMESDFAAGTMIGAVLPREDRRDALVG-SYADLDALPDG 154 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +++GTSS+RR+ALLL R D+ + RG I R+ KLN AI+LA AG+KRLK + Sbjct: 155 AIVGTSSVRRRALLLHHRPDLRIKLLRGNINKRIAKLNQGDYDAIILAVAGLKRLKLS-L 213 Query: 185 IKEILNIEDFPPSPGQGAICIETH----------VNNPKAQELVKVINHEDTWDSVNCER 234 L+ + P + QGA+ ++ + + + + ++ V ER Sbjct: 214 DYTPLDEKLMPTAAAQGALAVQLCDPSLAQGEKAIRQQAVFDAISPLACVNSTIEVTAER 273 Query: 235 AFLAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 A LA LDGSC + IA A TL G+VL+SDG + ++ +A+ +G Sbjct: 274 AMLAHLDGSCHTPIAASARFVDDKTLRLDGMVLSSDGSAAFRRTMTASKDEAVALGIKVG 333 Query: 294 QYIR-FISNKNVF 305 + + Sbjct: 334 VALLDDAGGRGFL 346 >gi|241762462|ref|ZP_04760539.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241372964|gb|EER62631.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 308 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 110/301 (36%), Positives = 156/301 (51%), Gaps = 9/301 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 PFR+G+R SPLAL A S+L H +VI+P+ T GD+ ++ L +IGGK L+ Sbjct: 4 PFRLGSRGSPLALIQARSVASALCAAHSWSEDAVVIVPIRTSGDKNRHQALADIGGKALW 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E++ L +G+ID AVHS KD+ T + I+A LPRED+ D I SL+ L Sbjct: 64 TKELDIALTTGQIDAAVHSMKDVETFRPSHISIAAMLPREDVHDRLIGIP--SLEVLPYS 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +GT+S RR A + R DI + RG I+TRL KL N + A LLA AG+ RL + V Sbjct: 122 GCVGTASPRRAAQIRCIRPDIEIKLLRGNIDTRLEKLANKQFDATLLAAAGLIRLGRNDV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + ++ P+ GQGAI IE + A E V +I+H T +V ER L L+ C Sbjct: 182 GY-DVPLDQMLPAAGQGAIGIEALA-DSAAWEKVSIIDHYPTHLAVQSERQLLLRLNADC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN-RCDAINIGRDAAQYIRFISNKN 303 S IA FA + + +GK + + + DA +G + S Sbjct: 240 HSPIAVFAEILEKNIRLRACLYTENGKFSASIDKEISQPSDAFEVG----SLLLNQSPPE 295 Query: 304 V 304 V Sbjct: 296 V 296 >gi|296118431|ref|ZP_06837010.1| hydroxymethylbilane synthase [Corynebacterium ammoniagenes DSM 20306] gi|295968572|gb|EFG81818.1| hydroxymethylbilane synthase [Corynebacterium ammoniagenes DSM 20306] Length = 300 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 83/300 (27%), Positives = 131/300 (43%), Gaps = 7/300 (2%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +IGTR S LA A R + D + ++T GD N E G G+FT Sbjct: 6 KIGTRGSKLATTQAGHVRDWITDNGTPS----ELHIVTTAGDV--NMAPVERIGVGVFTH 59 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 + + L E D AVHS KD+PT RED R+ I+ +L DL + Sbjct: 60 ALREALHEQECDIAVHSFKDLPTA-PDERFHLIVPKREDNREALIARDGLTLDDLPEGAK 118 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTS+ RR + L R D+ + RG IETR++ + N + A++LAYAG+ R Sbjct: 119 VGTSAPRRISQLKAMRPDLDIRPLRGNIETRMSYVTNGELDAVMLAYAGLVRAGYADRAT 178 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 ++ + + P+P QGA+ +E + + + V I ERA L L+ C + Sbjct: 179 QVFSPDVLMPAPAQGALAVEVNAQDAELVNAVNAIADAKAGLQAAGERAILRRLEAGCTA 238 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 +A + + + +G V DG S G ++ +G A+ + + Sbjct: 239 PVAATSVIEDDLITVHGGVFQLDGSRQAVASETGPLENSYELGIKVAEALIEQGAFEIIE 298 >gi|227505107|ref|ZP_03935156.1| porphobilinogen deaminase [Corynebacterium striatum ATCC 6940] gi|227198310|gb|EEI78358.1| porphobilinogen deaminase [Corynebacterium striatum ATCC 6940] Length = 295 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 86/301 (28%), Positives = 139/301 (46%), Gaps = 8/301 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F+IGTR S LA + R L + ++T GD N E G G+FT Sbjct: 2 FKIGTRGSKLATTQSGHVREWLKAN----GFESELHIVTTHGDV--NMAPVERIGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + L GE D AVHS KD+PT + R+D+R+ ++ +L L + Sbjct: 56 QALREALYGGECDIAVHSFKDLPTA-ADERFLLVVPERQDVREALVARDGLTLAQLPEGA 114 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTS+ RR + L R D+ + RG I+TR+ K+ + + A++LAYAG+ R + + Sbjct: 115 RVGTSAPRRISQLKAMRPDLDIQPLRGNIDTRMGKVTSGELDAVVLAYAGLVRADYQDMA 174 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+ + F P+P QGA+ IE V + A ++ + E + ER L+ L+ C Sbjct: 175 SEVFAPDTFMPAPAQGALAIEA-VKDSAAARAIETLIDEQASAASLGERTVLSRLEAGCT 233 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + +A + + L G V A DG S G DA +G ++ + + Sbjct: 234 APVAATSTIENGQLTVRGGVFALDGSRQLLASATGPLSDAAQLGSAVSEELFSRGAAELL 293 Query: 306 N 306 Sbjct: 294 G 294 >gi|119587854|gb|EAW67450.1| hydroxymethylbilane synthase, isoform CRA_d [Homo sapiens] Length = 321 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 94/337 (27%), Positives = 137/337 (40%), Gaps = 75/337 (22%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA ++L + P II +ST GD+I + L++IG K L Sbjct: 19 RVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 136 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 196 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + +IL+ E+ + GQ Sbjct: 197 GWHNRVGQILHPEECMYAVGQ--------------------------------------- 217 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 +G C +A K LY G V + DG + + +G D Sbjct: 218 -EGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLV 276 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 277 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 313 >gi|297564830|ref|YP_003683802.1| porphobilinogen deaminase [Meiothermus silvanus DSM 9946] gi|296849279|gb|ADH62294.1| porphobilinogen deaminase [Meiothermus silvanus DSM 9946] Length = 294 Score = 282 bits (723), Expect = 4e-74, Method: Composition-based stats. Identities = 89/304 (29%), Positives = 146/304 (48%), Gaps = 17/304 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + IGTR S LALA L + P ++ NR+ G Sbjct: 2 RVIVIGTRGSLLALAQTRWVVERLKE--NWPEVEFRTKTIT-------NRSEDPAAG--- 49 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 ++ L EID A+H+ +D+P GL ++A R D R+ F+ +A+ L+DL Sbjct: 50 ----LQDALRKREIDIALHALRDLPPAQADGLHLTAVTRRVDPREAFVGRSAKRLEDLPD 105 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+G SLRRKA LL +R D+ V + +G ++ +L L + AI++ + RL Sbjct: 106 GAVVGAPSLRRKAQLLAYRPDLVVRETKGDVDDQLEALGTGEYDAIIMPAGSLLRLDLRN 165 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + ++ E P+PGQGA+ +E + + A+EL +NH + D V ERAF+A L Sbjct: 166 RIDQFVDPEILLPAPGQGALGLEVRLGDDYAEELAYSLNHRPSSDRVCAERAFVAALGVG 225 Query: 244 CKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 ++ +A A+ + TL G V + DG+ G+ +A+ +G + AQ + K Sbjct: 226 LEAPVAALAFVEDDGTLRLEGGVFSPDGREMIRGEIEGDASEAVELGSELAQDLLAEGGK 285 Query: 303 NVFN 306 + Sbjct: 286 EILE 289 >gi|313835649|gb|EFS73363.1| porphobilinogen deaminase [Propionibacterium acnes HL037PA2] gi|314928321|gb|EFS92152.1| porphobilinogen deaminase [Propionibacterium acnes HL044PA1] gi|314970250|gb|EFT14348.1| porphobilinogen deaminase [Propionibacterium acnes HL037PA3] Length = 337 Score = 282 bits (723), Expect = 4e-74, Method: Composition-based stats. Identities = 94/329 (28%), Positives = 145/329 (44%), Gaps = 32/329 (9%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L ++ + ++T+GD + +L +GG G+F Sbjct: 7 IRLGTRASTLATTQSEMVAGMLRS----EGLDVDLTTITTRGDT-STTSLAAMGGIGVFA 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 I L+ G+ D AVHS KD+PT GL I A RED RD ++ +L DL + Sbjct: 62 SAIRAALLGGDADIAVHSFKDLPTGRPLGLTIGAVPHREDPRDALVARDGLTLNDLPQGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------NNKAHAILLAYAG 175 +GT S RR A LL R D+++ID RG ++TRL ++ A++LA +G Sbjct: 122 SVGTGSPRRAAQLLAVRPDLTIIDIRGNVDTRLGRVKGLGHYAQGSGTEDLDAVVLAASG 181 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK---AQELVKVINHEDTWDSVNC 232 + RL V+ E LN P+P QGA+ +E + + + + I+ T + Sbjct: 182 LARLGHSDVVTEFLNPSVMLPAPAQGALAVECRAADSRHGKLAKALAKIDDRPTRLAATA 241 Query: 233 ERAFLAELDGSCKSAIAGFAYCK------GSTLYFYGIVLASDGKIFHE--------VSR 278 ERA L+ L+ C + I A K L +V A DG Sbjct: 242 ERAVLSHLEAGCAAPIGALAQLKPAPGKSPEVLTLDVVVTAVDGSRTIREQVSVELPEEV 301 Query: 279 NGNRCDAINIGRDAAQYIRFISNKNVFNF 307 + A +G AA+ + +V + Sbjct: 302 DPALAAAHTLGMTAAEELLDDGAADVADL 330 >gi|325954067|ref|YP_004237727.1| porphobilinogen deaminase [Weeksella virosa DSM 16922] gi|323436685|gb|ADX67149.1| porphobilinogen deaminase [Weeksella virosa DSM 16922] Length = 306 Score = 282 bits (723), Expect = 4e-74, Method: Composition-based stats. Identities = 91/308 (29%), Positives = 140/308 (45%), Gaps = 16/308 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR SPLAL A + + L I IIP+ ++GD + + +G G+ Sbjct: 2 KKIRIGTRQSPLALWQANKVAALLSKK----GCEIEIIPIKSEGDLNLKQPIYSLGITGV 57 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ ++ L++ +ID AVHS KD+PT L +GL + A+ R + D+ + + Sbjct: 58 FTKSLDIALLNNKIDIAVHSLKDVPTVLPEGLALKAFPERANSSDILVYKSNDIFT--KT 115 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK--- 180 H I T SLRR+A L + +++D RG ++ RL KL +N + A AG+ R + Sbjct: 116 HRTIATGSLRRRAFWLHRYPEDTLVDLRGNVQLRLQKLQDNDWDGAIFAMAGLDRSEIIA 175 Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E I+ +P QG + + + IN+E+ ER FL Sbjct: 176 DLENRKLHYSTIDWMLAAPSQGILGVVAREDFD-----FPSINNEECELYATVERQFLNV 230 Query: 240 LDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+G C + I F G +L+ DGK EV NR + GR A+ Sbjct: 231 LEGGCTAPIGALVSPLSADMYRFQGTILSLDGKEKIEVVDQFNRSEYKEFGRKMAEKCLE 290 Query: 299 ISNKNVFN 306 K + + Sbjct: 291 QGAKQLID 298 >gi|255533333|ref|YP_003093705.1| porphobilinogen deaminase [Pedobacter heparinus DSM 2366] gi|255346317|gb|ACU05643.1| porphobilinogen deaminase [Pedobacter heparinus DSM 2366] Length = 526 Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats. Identities = 89/261 (34%), Positives = 137/261 (52%), Gaps = 10/261 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K IGTR S LAL A + L + + + T+GD+I N L ++ GKG Sbjct: 2 KRLIIGTRGSDLALWQANFIKDKLAAI----GVEAELKIIKTQGDKILNLRLDKLEGKGF 57 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----QSLK 119 FT+E+E++L+ G ID AVHS KD+PT GL I+A RED ++ + Sbjct: 58 FTKELEEELLGGTIDIAVHSHKDLPTVHPAGLTIAAVTEREDPSELLLILKDCVSINHKL 117 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +++GTSS RRKA LL R D+++ D RG + TR+ KL + AILLA AG+ RL Sbjct: 118 SLKKGAMVGTSSNRRKAQLLALRPDLNIEDLRGNVPTRIQKLRDEDYDAILLARAGVNRL 177 Query: 180 K--KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + E+++ + P+P QGA+ I+ N + ++++ INH +T + + ER L Sbjct: 178 NIDLSEFHVEVVDTTELVPAPAQGALAIQIRENENELFDILQQINHSETAEEIAIERKVL 237 Query: 238 AELDGSCKSAIAGFAYCKGST 258 +G C + + + Sbjct: 238 NLFEGGCHMPLGCYCKKEDGQ 258 >gi|119587853|gb|EAW67449.1| hydroxymethylbilane synthase, isoform CRA_c [Homo sapiens] Length = 304 Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats. Identities = 94/337 (27%), Positives = 137/337 (40%), Gaps = 75/337 (22%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA ++L + P II +ST GD+I + L++IG K L Sbjct: 2 RVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 60 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R+ Sbjct: 120 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRM 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + +IL+ E+ + GQ Sbjct: 180 GWHNRVGQILHPEECMYAVGQ--------------------------------------- 200 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 +G C +A K LY G V + DG + + +G D Sbjct: 201 -EGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLV 259 Query: 285 --------------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 260 GITARNIPRGPQLAAQNLGISLANLLLSKGAKNILDV 296 >gi|302695979|ref|XP_003037668.1| hypothetical protein SCHCODRAFT_255775 [Schizophyllum commune H4-8] gi|300111365|gb|EFJ02766.1| hypothetical protein SCHCODRAFT_255775 [Schizophyllum commune H4-8] Length = 358 Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats. Identities = 88/327 (26%), Positives = 145/327 (44%), Gaps = 22/327 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGG 60 + + F + +R SP+A A + +++L + P +ST GD+ + L +GG Sbjct: 5 QPRTFVLASRKSPMAQAQTVQVQAALRALDTSPSAPKFETSFMSTAGDKNQVQALYFLGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL-- 118 K L+T ++E L D VHS KD+PT L +G ++ R++ DV Sbjct: 65 KELWTGDLEVALKERAADMLVHSLKDVPTVLPEGFVLAGISERDEPVDVMCVKAGMPWRT 124 Query: 119 -KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAG 175 ++L SV+GTSS+RR A+L R + +D RG I TRL KL++ A++ A AG Sbjct: 125 PEELPEGSVVGTSSVRRIAMLKRRFPHLKFLDVRGNIATRLAKLDDPALPYAALIAAKAG 184 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + R+ + I L + + GQGA+ IE ++ +A L K I H + ERA Sbjct: 185 LVRVNLQHRITCDLAPPTYSYAVGQGALGIEVRADDTEALALCKRITHWPSLWRCRAERA 244 Query: 236 FLAELDGSCKSAIAG-------------FAYCKGSTLYFYGIVLASDGKIFHEVSRNG-- 280 L EL+G C + A + L V + DG + Sbjct: 245 CLRELEGGCSVPVGVVSAIEIENEGEGEEAVGRAGVLSLTAGVTSVDGTEHVQHEIREHV 304 Query: 281 -NRCDAINIGRDAAQYIRFISNKNVFN 306 + +A +G A+ ++ + + Sbjct: 305 RSVEEAEALGVRMAKTLKQNGAQKILE 331 >gi|114329088|ref|YP_746245.1| porphobilinogen deaminase [Granulibacter bethesdensis CGDNIH1] gi|114317262|gb|ABI63322.1| porphobilinogen deaminase [Granulibacter bethesdensis CGDNIH1] Length = 344 Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats. Identities = 107/315 (33%), Positives = 156/315 (49%), Gaps = 10/315 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKI--PPHNIVIIPLSTKGDRITNRTLTEI 58 M P R+GTR SPLAL + L I ++T GDR+ +R L EI Sbjct: 28 MHGLPLRVGTRASPLALVQTRAFLARLRSFCPILRDMEVFEEHQINTTGDRVQDRRLAEI 87 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLF +EI + L ID AVHS KD+ T+L G+ ++ L RED RD I + Sbjct: 88 GGKGLFAKEIHEALADRRIDFAVHSLKDLETQLPPGIVLACTLKREDARDAIILPPGFTP 147 Query: 119 KD-------LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILL 171 L +++GTSS+RR+A L R D+ RG ++TRL KL + A LL Sbjct: 148 PPPGDPFSVLQQGALVGTSSVRRQAQLAHARPDLRFATIRGNVQTRLAKLARGECDASLL 207 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG++RL E+ +L+ E P+ QG + + ++ ++L+ I + Sbjct: 208 ALAGLRRLDMEQAASVVLDTEIMVPAACQGIVGVTVREDDYALRDLLAGIEDREAKAVST 267 Query: 232 CERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 ERA L LDGSC++ I G A G L+ G+V A DG + G +A +G Sbjct: 268 AERALLNLLDGSCRTPIGGHARILSGGVLHLTGLVAAEDGSFLLRRTLQGAVSEAEALGA 327 Query: 291 DAAQYIRFISNKNVF 305 + + +R S ++F Sbjct: 328 ELGRSLRADSPPDIF 342 >gi|325108657|ref|YP_004269725.1| hydroxymethylbilane synthase [Planctomyces brasiliensis DSM 5305] gi|324968925|gb|ADY59703.1| hydroxymethylbilane synthase [Planctomyces brasiliensis DSM 5305] Length = 329 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 88/322 (27%), Positives = 148/322 (45%), Gaps = 22/322 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR S LAL A + L H P N+ ++ +ST+GD L +GG G+F Sbjct: 7 TVRIATRSSELALWQATHVAALLRAEH--PDINVELVDVSTQGDADQRAPLWSMGGTGVF 64 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKL-LKGLQISAYLPREDIRDVFISHT--------A 115 T+E+++ ++ G D AVHS KD+PT++ L ++A RE D + A Sbjct: 65 TKEVQRTVLDGMADLAVHSLKDLPTEIVDPDLTLAAVPEREQRWDALVLRNDLKGDVDPA 124 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 L L + IG+ SLRR+A L R D+ +++ RG + TRL KL+ + AI+LA AG Sbjct: 125 DPLASLQDGARIGSGSLRRRAQLRAQRPDLKLLEIRGNLNTRLRKLDEGEYDAIILATAG 184 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + RL + + L P+ GQGA+ +E ++ + ++L++ +N + + + ER Sbjct: 185 LLRLGWNERLSCRLQPPVMFPAVGQGALGLECRTDDEQTRKLLESLNDPEARLATHAERR 244 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD----------- 284 L L C + + +VL+ DG + + + D Sbjct: 245 LLNSLRAGCHAPVGVNCERAEGRFTLSSVVLSPDGAHQVDAEDSVDLGDDWANWQEKLSE 304 Query: 285 AINIGRDAAQYIRFISNKNVFN 306 +G A+ + + + Sbjct: 305 VGKLGEKVAEVLLEHGAQELIE 326 >gi|317507248|ref|ZP_07964994.1| porphobilinogen deaminase [Segniliparus rugosus ATCC BAA-974] gi|316254442|gb|EFV13766.1| porphobilinogen deaminase [Segniliparus rugosus ATCC BAA-974] Length = 309 Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 97/305 (31%), Positives = 151/305 (49%), Gaps = 10/305 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA A R ++ + ++ ++T GDR++ + EIG G+FT Sbjct: 2 IRVGTRGSLLATTQAATVRDAIRAL----GEQAELVIVNTIGDRVSG-PIVEIG-VGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + L++ EID AVHS KD+PT + A R D RDV +S + L DL S Sbjct: 56 SALRDALLADEIDVAVHSLKDLPTAQDPRFSLVAVPERADPRDVLVSRSGSRLADLPPGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT + RR A L R+D+ + RG +++R+ K+ + AI++A AG+ RL +E+ Sbjct: 116 AVGTGAPRRSAQLRLARADLEIQPIRGNLDSRMRKVATAECDAIVVARAGLLRLGREQEA 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNP-KAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 EIL+ P+PGQGA+ +E P E++ ++HE + + ERA LAEL C Sbjct: 176 TEILDPAVMLPAPGQGALAVECRSEAPVSLTEVLGRLDHEHSRVTSAAERAVLAELSAGC 235 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + A TL V A DG +++ N A +GR A+ +R + Sbjct: 236 SGPVGALARIDAQTLRVEAAVCALDGSRQIREAQSAQLLNESHAAALGRRVAESLRSMGA 295 Query: 302 KNVFN 306 + Sbjct: 296 MELVG 300 >gi|148642941|ref|YP_001273454.1| porphobilinogen deaminase [Methanobrevibacter smithii ATCC 35061] gi|222445181|ref|ZP_03607696.1| hypothetical protein METSMIALI_00802 [Methanobrevibacter smithii DSM 2375] gi|261350258|ref|ZP_05975675.1| hydroxymethylbilane synthase [Methanobrevibacter smithii DSM 2374] gi|148551958|gb|ABQ87086.1| porphobilinogen deaminase [Methanobrevibacter smithii ATCC 35061] gi|222434746|gb|EEE41911.1| hypothetical protein METSMIALI_00802 [Methanobrevibacter smithii DSM 2375] gi|288861043|gb|EFC93341.1| hydroxymethylbilane synthase [Methanobrevibacter smithii DSM 2374] Length = 289 Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 158/291 (54%), Gaps = 6/291 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LALA + D+ I NI + + TKGD+ITN L + KGLFT+E Sbjct: 3 VGTRGSQLALAQTNQVC---KDLASITNENIDVNIIKTKGDKITNSQLYNMDAKGLFTKE 59 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 ++K L+ EID AVHS KD+PT+L + L+I+A R +V IS+ ++ +L +S + Sbjct: 60 LDKALLEEEIDFAVHSFKDLPTELDEELEIAAVPKRVAPNEVLISN--KNWDELGPNSKL 117 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A + RG IETR++K+N + A L+A AG+ RL + IK Sbjct: 118 GTSSLRREAFCNYHNKCFELKPIRGNIETRISKVNGSDLDATLMAQAGLIRLNLTQHIKT 177 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + ++ P+ GQGA+ I T ++ K +E++ +N + V E+ L EL C+ Sbjct: 178 VFPLDYITPAAGQGALAIITRKDSDK-KEIISKLNDYQSRQEVFAEKQVLEELGVGCQWP 236 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 I A K Y I+L +G++ E + G+ DA+ G+ + + Sbjct: 237 IGAIAQMKDKQFCIYSILLTKEGEVLKEHTEKGSIRDAVQFGKKIGKVFKD 287 >gi|239980250|ref|ZP_04702774.1| porphobilinogen deaminase [Streptomyces albus J1074] Length = 307 Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 81/305 (26%), Positives = 146/305 (47%), Gaps = 21/305 (6%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 +A + + ++ + P + ++ ++T GD + L +IGG G+F + + L+ GE Sbjct: 1 MAQSGQVADAVHQLTGRP---VELVEITTYGDT-SREHLAQIGGTGVFVAALREALVRGE 56 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 +D AVHS KD+PT L ++A PRED RDV I+ ++L + +GT S RR A Sbjct: 57 VDFAVHSLKDLPTAQPDELVLAAVPPREDPRDVLIARDGLRFEELPEGARVGTGSPRRMA 116 Query: 137 LLLRW----RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192 L + R + + RG I+TR+ + + + A++LA AG+ R+ + + E L+++ Sbjct: 117 QLNAYARGHRMAVETVPIRGNIDTRIGFVRSGELDAVVLAAAGLHRVGRSDEVTEYLSVD 176 Query: 193 DFPPSPGQGAICIETHVNNPK----AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248 P+PGQGA+ IE + ++ ++ T +V ER+ LA L+ C + + Sbjct: 177 TILPAPGQGALAIECAAGHEADGLPLAAVLAELDDPATRAAVTAERSLLAALEAGCSAPV 236 Query: 249 AGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGRDAAQYIRFI 299 A + G+V + DG ++S G +A +G + A + Sbjct: 237 GALADLLADGQVVKEMRLRGVVGSPDGSALVQLSTTGPVPTTHDEAAALGTELAAEMLAK 296 Query: 300 SNKNV 304 + Sbjct: 297 GAAGL 301 >gi|167761211|ref|ZP_02433338.1| hypothetical protein CLOSCI_03616 [Clostridium scindens ATCC 35704] gi|167660877|gb|EDS05007.1| hypothetical protein CLOSCI_03616 [Clostridium scindens ATCC 35704] Length = 803 Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 92/293 (31%), Positives = 148/293 (50%), Gaps = 7/293 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K +G+R S LA+ + + H P + ++ + T GD+ + TL +IGG Sbjct: 1 MSRK-IVVGSRESRLAIIQTEKVMEHIRRSH--PKIELEMMTMETTGDKRLDVTLDQIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E++K L+ G ID AVHS KDMP K + I Y PRED+RDV + +++ Sbjct: 58 KGLFVKELDKALLDGRIDLAVHSLKDMPMDESKVIPIVRYSPREDVRDVLVLPKG--VEE 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 +IG SS RR+ R + RG + TRL KL+ + A++LA AG+KRL Sbjct: 116 WDGRGIIGCSSFRRRIQAKRLFKEAEFRSVRGNVITRLEKLDRGEYDALILAAAGLKRLG 175 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I + ++ P+ GQG + ++ ++ + ++ ++ ERAF+ L Sbjct: 176 LEYRISRYFSTDEILPAAGQGTMAVQGRIDMNY--DFLEGYGKKEDAYIAKGERAFVRYL 233 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 DG C S +A + L G+ + + S++G +A IGR+ A Sbjct: 234 DGGCSSPVAAYGEVIDGQLLMKGLYYMEETGNYAIGSKSGPVEEAEKIGRELA 286 >gi|300779915|ref|ZP_07089771.1| hydroxymethylbilane synthase [Corynebacterium genitalium ATCC 33030] gi|300534025|gb|EFK55084.1| hydroxymethylbilane synthase [Corynebacterium genitalium ATCC 33030] Length = 295 Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 90/301 (29%), Positives = 136/301 (45%), Gaps = 9/301 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+ TR S LA A R +L+ H+ + ++T GD E G G+F Sbjct: 4 TLRVATRGSKLATTQAGHIRDALISA----GHSAELTIVTTAGDMSQ--APVERIGVGVF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T I + L GE D AVHS KD+PT + RED R+ I+ L DL Sbjct: 58 TTAIRQALFDGEADVAVHSFKDLPTA-HEPRTHLIIPVREDRREALIARDGLKLADLPSG 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTS+ RR A L R D+ + RG IE+R+ ++ + + A++LAYAG+ R+ + Sbjct: 117 ARVGTSAPRRIAQLRAKRPDLDIHPLRGNIESRMGRVTSGELDAVVLAYAGMSRVGLGER 176 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E+ EDF P+P QGA+ +E + +A + + + ER LA L+ C Sbjct: 177 ATEVFAPEDFMPAPAQGALAVECRAEDAQAVAAIDTLVDDFATRCALTERFVLATLEAGC 236 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A A G + G V A DG +G D +G+ AQ + Sbjct: 237 TAPVAASAVLDGDEITVRGGVFALDGSAQLVREASGT--DPREVGQACAQQLFDAGAAQF 294 Query: 305 F 305 Sbjct: 295 L 295 >gi|148259148|ref|YP_001233275.1| porphobilinogen deaminase [Acidiphilium cryptum JF-5] gi|146400829|gb|ABQ29356.1| porphobilinogen deaminase [Acidiphilium cryptum JF-5] Length = 333 Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 108/312 (34%), Positives = 156/312 (50%), Gaps = 11/312 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMD---VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 P R+GTR SPLAL ++L + P +ST GDR+T+R L EIGGK Sbjct: 20 PLRVGTRGSPLALRQTDMFLAALREICPALGFAPDAFAPEIISTTGDRVTDRPLAEIGGK 79 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-------SHT 114 GLF +EI + L+ G ID AVHS KD+ T L G+ ++ + RED RD I + Sbjct: 80 GLFAKEIHEALLDGRIDFAVHSLKDLETALPDGIILACTMKREDARDALILADGLGPVND 139 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 L + +GTSS+RR+A LL R D+ + RG + TRL+ A LLA A Sbjct: 140 GDIWSSLPKGARVGTSSVRRQAQLLHARPDLQIGLLRGNVRTRLDAARIGTFDATLLALA 199 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G++RL E+ + ++ E P+ QG + I + + EL+ I + + ER Sbjct: 200 GLRRLGFEEEVAAAIDPEAMVPAACQGIVGITVRAADSRLAELLAAIENHEAKAVSKAER 259 Query: 235 AFLAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 A LA LDGSC++ I G A L+ G+ DG + S N DA+ +G + Sbjct: 260 ALLAALDGSCRTPIGGHARLLPDGNLHLTGLTARPDGSFLLKRSEVANAADAVRLGAELG 319 Query: 294 QYIRFISNKNVF 305 +R S ++F Sbjct: 320 ASLRRDSPADIF 331 >gi|328908097|gb|EGG27856.1| hydroxymethylbilane synthase [Propionibacterium sp. P08] Length = 334 Score = 282 bits (721), Expect = 7e-74, Method: Composition-based stats. Identities = 94/329 (28%), Positives = 145/329 (44%), Gaps = 32/329 (9%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L ++ + ++T+GD + +L +GG G+F Sbjct: 4 IRLGTRASTLATTQSEMVAGMLRS----EGLDVDLTTITTRGDT-STTSLAAMGGIGVFA 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 I L+ G+ D AVHS KD+PT GL I A RED RD ++ +L DL + Sbjct: 59 SAIRAALLGGDADIAVHSFKDLPTGRPLGLTIGAVPHREDPRDALVARDGLTLNDLPQGA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------NNKAHAILLAYAG 175 +GT S RR A LL R D+++ID RG ++TRL ++ A++LA +G Sbjct: 119 SVGTGSPRRAAQLLAVRPDLTIIDIRGNVDTRLGRVKGLGHYAQGSGTEDLDAVVLAASG 178 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK---AQELVKVINHEDTWDSVNC 232 + RL V+ E LN P+P QGA+ +E + + + + I+ T + Sbjct: 179 LARLGHSDVVTEFLNPSVMLPAPAQGALAVECRAADSRHGKLAKALAKIDDRPTRLAATA 238 Query: 233 ERAFLAELDGSCKSAIAGFAYCK------GSTLYFYGIVLASDGKIFHE--------VSR 278 ERA L+ L+ C + I A K L +V A DG Sbjct: 239 ERAVLSHLEAGCAAPIGALAQLKPAPGKSPEVLTLDVVVTAVDGSRTIREQVSVELPEEV 298 Query: 279 NGNRCDAINIGRDAAQYIRFISNKNVFNF 307 + A +G AA+ + +V + Sbjct: 299 DPALAAAHTLGMTAAEELLDDGAADVADL 327 >gi|326402301|ref|YP_004282382.1| porphobilinogen deaminase [Acidiphilium multivorum AIU301] gi|325049162|dbj|BAJ79500.1| porphobilinogen deaminase [Acidiphilium multivorum AIU301] Length = 335 Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats. Identities = 108/312 (34%), Positives = 155/312 (49%), Gaps = 11/312 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMD---VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 P R+GTR SPLAL ++L + P +ST GDR+T+R L EIGGK Sbjct: 22 PLRVGTRGSPLALRQTDMFLAALREICPALGFAPDAFAPEIISTTGDRVTDRPLAEIGGK 81 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-------SHT 114 GLF +EI + L+ G ID AVHS KD+ T L G+ ++ + RED RD I + Sbjct: 82 GLFAKEIHEALLDGRIDFAVHSLKDLETALPDGIILACTMKREDARDALILADGLGPVND 141 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 L + +GTSS+RR+A LL R D+ + RG + TRL+ A LLA A Sbjct: 142 GDIWSSLPKGARVGTSSVRRQAQLLHARPDLQIGLLRGNVRTRLDAARIGTFDATLLALA 201 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G++RL E+ + ++ E P+ QG + I + + EL+ I + + ER Sbjct: 202 GLRRLGFEEEVAAAIDPEAMVPAACQGIVGITVRAADSRLAELLAAIENHEAKAVSKAER 261 Query: 235 AFLAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 A LA LDGSC++ I G A L+ G+ DG + S N DA +G + Sbjct: 262 ALLAALDGSCRTPIGGHARLLPDGNLHLTGLTARPDGSFLLKRSEVANAADAARLGAELG 321 Query: 294 QYIRFISNKNVF 305 +R S ++F Sbjct: 322 ASLRRDSPADIF 333 >gi|302205429|gb|ADL09771.1| Porphobilinogen deaminase [Corynebacterium pseudotuberculosis C231] gi|308275667|gb|ADO25566.1| Porphobilinogen deaminase [Corynebacterium pseudotuberculosis I19] Length = 296 Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats. Identities = 86/301 (28%), Positives = 140/301 (46%), Gaps = 7/301 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 F IGTR S LA + R +L+ ++ + ++T GD N E G G+F Sbjct: 2 TFTIGTRGSLLATTQSGHVRDALISQ----GYSAELSIVTTPGDV--NMAPVERIGVGVF 55 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+ + L+ G D AVHS KD+PT+ + R D RD ++ +L +L Sbjct: 56 TQALRDVLVKGGCDIAVHSFKDLPTQRDPRFHLI-VPERADARDCLVARDGLTLAELPQG 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGT + RR + + R D+ + RG I+TR+ K+ + + A++LAYAG+ R+ + Sbjct: 115 ARIGTGAPRRISQIKALRPDVECVPLRGNIDTRMGKVFSGELDAVVLAYAGLSRVGRGDE 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E+ N E F P+P QGA+ IE V++ A + I + + ER L L+ C Sbjct: 175 ATEVFNPERFLPAPAQGALAIECRVDDAAAVAAINAIRNAEDETCALAERVVLNRLEAGC 234 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A + L G V++ DG + G +A+ IG A + + Sbjct: 235 TAPVAAHSVIIEQELQVTGAVISLDGSKVFRATMTGGLSEAVAIGEKVAAKLIQDGAAEL 294 Query: 305 F 305 Sbjct: 295 L 295 >gi|307244624|ref|ZP_07526728.1| hydroxymethylbilane synthase [Peptostreptococcus stomatis DSM 17678] gi|306492005|gb|EFM64054.1| hydroxymethylbilane synthase [Peptostreptococcus stomatis DSM 17678] Length = 310 Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats. Identities = 99/304 (32%), Positives = 143/304 (47%), Gaps = 12/304 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +GTR S LALA S ++D K P I + TKGD+I +++L +IG KGLF Sbjct: 2 KLIVGTRGSALALAQTDSIISLVLD--KFPDLEIEKKIIKTKGDKILDKSLDKIGDKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA-- 122 EIE++L+ G ID AVHS KDMPTK+ GL+++ R+D RDV + + L+ Sbjct: 60 VSEIERELLEGTIDFAVHSLKDMPTKISPGLKLAQTPERQDPRDVLVINPKHQLRPEDIM 119 Query: 123 ------LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 IGT S RR + L R I + RG I TRL KL + AI+LA AGI Sbjct: 120 DWLRSSQGLKIGTGSKRRTSQLKRINESIQPMMIRGNIGTRLEKLVSQDLDAIVLAAAGI 179 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 RL + + + E+ P+ GQGA+ IE N+ + + + + ER F Sbjct: 180 NRLGMDGLNLYHFSYEEMIPACGQGALAIEVRSNDENTDRIFDFLADDQACMEIEAERTF 239 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQ 294 L ++G C + G+ G+ D + A +G+D A Sbjct: 240 LEVINGGCHVPVGATVKKVGNKWVLMGMYGREDCSSIVYGQLDFEPSLGGAKKVGQDLAS 299 Query: 295 YIRF 298 Y+ Sbjct: 300 YLIK 303 >gi|302523839|ref|ZP_07276181.1| porphobilinogen deaminase [Streptomyces sp. AA4] gi|302432734|gb|EFL04550.1| porphobilinogen deaminase [Streptomyces sp. AA4] Length = 315 Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats. Identities = 90/306 (29%), Positives = 148/306 (48%), Gaps = 19/306 (6%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIGTR S LALA ++ + I+ ++T GD +++ +++IG G Sbjct: 2 TRVIRIGTRGSKLALAQTGIVADTIRATGA----EVEIVTVTTPGD-LSSAPISQIG-VG 55 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT + + L+ EID AVHS KD+PT GL ++A PRED RD I+ +L +L Sbjct: 56 VFTSALREALLRNEIDVAVHSYKDLPTAPEAGLVLAAVPPREDPRDALIARDGLTLGELP 115 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GT + RR A L + ++ RG I+TR+ K+ + + A++LA AG+ R+ + Sbjct: 116 PGAKVGTGAARRMAQLRALGLGLEIVPIRGNIDTRMRKVTDGELDAVVLARAGLARVGRV 175 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELD 241 I E L+ P+P QGA+ +E + + L+ ++ E T +V ERA LA L+ Sbjct: 176 DEITETLDPIQMLPAPAQGALALECRAADVDIEHLLASAVDDETTRVAVTAERALLAALE 235 Query: 242 GSCKSAIAGFAYCKGS---------TLYFYG--IVLASDGKI-FHEVSRNGNRCDAINIG 289 C + + A + G V +G + S +A +G Sbjct: 236 AGCSAPVGALAEIVEDLDDEGAVVERISLRGTAAVEGENGGVDMVRASAIAGIGEAEKLG 295 Query: 290 RDAAQY 295 R+ A Sbjct: 296 RELAAE 301 >gi|290955334|ref|YP_003486516.1| porphobilinogen deaminase [Streptomyces scabiei 87.22] gi|260644860|emb|CBG67946.1| porphobilinogen deaminase [Streptomyces scabiei 87.22] Length = 296 Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats. Identities = 96/295 (32%), Positives = 144/295 (48%), Gaps = 6/295 (2%) Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74 +ALA R+ L +H P ++P+ T GD+ L+++ GKG FT+E++ L++ Sbjct: 1 MALAQVERVRAELAVLH--PALRTEVVPVKTTGDKWMGD-LSQVEGKGAFTKEVDAALVA 57 Query: 75 GEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSL 132 GE D AVH KD+P L G +A+L R+DIRD + ++L +L + IGTSS+ Sbjct: 58 GEADLAVHCVKDIPADRPLPAGTMFAAFLKRDDIRDALVDPAGRTLDELPAGTRIGTSSV 117 Query: 133 RRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192 RR A L + + FRG RL KL +A A+LLA +G++R+ + VI E L++E Sbjct: 118 RRTAQLAASHPHLECVPFRGNANRRLEKLAAGEADALLLAVSGLERIGRADVISEFLSVE 177 Query: 193 DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252 P G G + ++ + + V + DT ER FL L G C S IAGFA Sbjct: 178 TMMPPIGAGVLALQCREGDALTIDTVSGLGDPDTHRETLAERMFLHVLQGHCNSPIAGFA 237 Query: 253 YCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 G L V DGK R D +G A + +++ + Sbjct: 238 RTDRGGELSLRASVFTPDGKTVLNAHEWAGRLDPATLGTSVAVALLRQGARDLID 292 >gi|218509456|ref|ZP_03507334.1| porphobilinogen deaminase [Rhizobium etli Brasil 5] Length = 279 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 132/226 (58%), Positives = 164/226 (72%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A E R LM H +P I+ LSTKGDRIT+R+L EIGG Sbjct: 54 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEEMFEIVVLSTKGDRITDRSLAEIGG 113 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E+KL+SGE+D AVHSAKDMPT L GL +SAYLPREDIRD I TA L D Sbjct: 114 KGLFTEELEQKLVSGELDFAVHSAKDMPTHLPDGLHLSAYLPREDIRDAVIGRTAPKLID 173 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R DI+VI FRG +ETRL KL + A LLA AG+KRL Sbjct: 174 LPHGATVGSSSLRRQALIRRMRPDINVIIFRGSVETRLRKLEEGQVDATLLALAGLKRLG 233 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226 K +V+ +IL+ + FPP+P QGAICIE+ + + + +L+ +N T Sbjct: 234 KVEVLTDILDPDTFPPAPAQGAICIESRIGDTRIDDLLAAVNDAAT 279 >gi|212695966|ref|ZP_03304094.1| hypothetical protein ANHYDRO_00499 [Anaerococcus hydrogenalis DSM 7454] gi|212677089|gb|EEB36696.1| hypothetical protein ANHYDRO_00499 [Anaerococcus hydrogenalis DSM 7454] Length = 318 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 94/299 (31%), Positives = 145/299 (48%), Gaps = 6/299 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IG+R S LAL A + L I+ +STKGDRI +R + ++ KG+F Sbjct: 2 IKIGSRASKLALIQANMVKDILEK----EGLEAQIVEISTKGDRIRDRKIDQLNSKGVFV 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EIE+KL+ ID AVHS KDMP+++ L + L ED RD F+ D ++ Sbjct: 58 REIEEKLLDKTIDIAVHSLKDMPSQIDDRLIFTPPLKGEDPRDCFVGKDVFKKMDDLNNA 117 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GT S RR S+I RG +ETR+ K+ + ++LA +G+ R + I Sbjct: 118 LVGTGSNRRVCQGKNHFSNIKFKAIRGNVETRIKKVQSENLDGVILAKSGLIRAGLDGEI 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ F PSP QG + IE + K E+ K + E T + ERAF EL C Sbjct: 178 NFDLDPHIFTPSPCQGILGIEIRKEDKKLFEIFKKNSDEKTLFRMETERAFQKELGADCS 237 Query: 246 SAIAGFAYCKGSTLYFYG-IVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 + + F + G + D +I +E +GN + I++ + A+ ++ S K Sbjct: 238 TPMGIFTEIDHDKITLTGSMAFDKDDRINYE-RVSGNISERIHLAQKLARTLKKKSYKK 295 >gi|295837224|ref|ZP_06824157.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74] gi|197699853|gb|EDY46786.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74] Length = 328 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 88/302 (29%), Positives = 145/302 (48%), Gaps = 26/302 (8%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M KP R+GTR S LA+A + ++ + P + ++ ++T GD + L IGG Sbjct: 1 MTDKPLRLGTRRSKLAMAQSGLVADAVREATGRP---VALVEITTYGDT-SREHLARIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + L+ G++D AVHS KD+PT + L ++A RED RD I+ +L+ Sbjct: 57 TGVFVTALRDALLRGDVDFAVHSLKDLPTAQPEELVLAAIPRREDPRDALIARDGLALEQ 116 Query: 121 LALHSVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + IGT S RR A L I + RG ++TR+N + + + A++LA AG+ Sbjct: 117 LPRGARIGTGSPRRTAQLNAHARAHGLGIETVPIRGNVDTRINFVRDGELDAVVLAAAGL 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 RL + + + L + P+PGQGA+ +E E + ++ T +V ERA Sbjct: 177 HRLGRGAEVTQYLAPDTVLPAPGQGALAVECPPG--PLAEALARLDDPYTRAAVAAERAL 234 Query: 237 LAELDGSCKSAIAGFAYCKGST----------------LYFYGIVLASDGKIFHEVSRNG 280 LA L+ C + + A T + G+V ++DG +++ G Sbjct: 235 LATLEAGCSAPVGALADFPDGTQDQAARPNEPARQTTEMRLRGVVGSTDGSALVQLTTTG 294 Query: 281 NR 282 + Sbjct: 295 HV 296 >gi|300857688|ref|YP_003782671.1| porphobilinogen deaminase [Corynebacterium pseudotuberculosis FRC41] gi|300685142|gb|ADK28064.1| Porphobilinogen deaminase [Corynebacterium pseudotuberculosis FRC41] gi|302329983|gb|ADL20177.1| Porphobilinogen deaminase [Corynebacterium pseudotuberculosis 1002] Length = 296 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 86/301 (28%), Positives = 140/301 (46%), Gaps = 7/301 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 F IGTR S LA + R +L+ ++ + ++T GD N E G G+F Sbjct: 2 TFTIGTRGSLLATTQSGHVRDALISQ----GYSAELSIVTTPGDV--NMAPVERIGVGVF 55 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+ + L+ G D AVHS KD+PT+ + R D RD ++ +L +L Sbjct: 56 TQALRDVLVKGGCDIAVHSFKDLPTQRDPRFHLI-VPERADARDCLVARDGLTLAELPQG 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGT + RR + + R D+ + RG I+TR+ K+ + + A++LAYAG+ R+ + Sbjct: 115 ARIGTGAPRRISQIKALRPDVECVPLRGNIDTRMGKVFSGELDAVVLAYAGLSRVGRGDE 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E+ N E F P+P QGA+ IE V++ A + I + + ER L L+ C Sbjct: 175 ATEVFNPERFLPAPAQGALAIECRVDDAAAVAAINAIRNAEDETCALAERVVLNRLEAGC 234 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A + L G V++ DG + G +A+ IG A + + Sbjct: 235 TAPVAAHSVIIEQELQVTGAVISLDGSKVLRATMTGGLSEAVAIGEKVAAKLIQDGAAEL 294 Query: 305 F 305 Sbjct: 295 L 295 >gi|51244454|ref|YP_064338.1| porphobilinogen deaminase [Desulfotalea psychrophila LSv54] gi|50875491|emb|CAG35331.1| probable porphobilinogen deaminase [Desulfotalea psychrophila LSv54] Length = 313 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 100/306 (32%), Positives = 160/306 (52%), Gaps = 7/306 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K IG+R S LA+ L I + TKGD+I +R++ +IG KG Sbjct: 2 KNIINIGSRKSKLAMWQTNTIAGQLEAA----GMETRINSMETKGDKILDRSIVKIGSKG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKDL 121 +FTEE+E +L +G D AVHSAKDM ++L + ++ A+ RE + DV +S + L D Sbjct: 58 VFTEELEVQLATGITDIAVHSAKDMQSQLPEDFELIAFSQREKVNDVLVSDDKEIDLADP 117 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 IGTSS+RR+A+L ++ + ++ RG ++TR+ K+ N A++LAYAG+KR++ Sbjct: 118 TKKIRIGTSSVRRRAMLKQYYPHVQAVEMRGNLQTRIEKMRNGDCDALMLAYAGVKRMEN 177 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVK-VINHEDTWDSVNCERAFLAE 239 + +I + F P GQG I IE N +P +E ++ +N D+ + ERA+L + Sbjct: 178 DDMIVMEFDTARFTPPVGQGCIAIEAATNLDPARREAIRTALNDADSESCLLAERAYLKK 237 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C G A +G L + + DG NR +A +G + +YI Sbjct: 238 LEGGCSIPAFGLACLEGEELVMRAGLSSLDGTRILVKEVRANRSEAETLGNNLGEYILEN 297 Query: 300 SNKNVF 305 + + Sbjct: 298 GGREML 303 >gi|312200104|ref|YP_004020165.1| porphobilinogen deaminase [Frankia sp. EuI1c] gi|311231440|gb|ADP84295.1| porphobilinogen deaminase [Frankia sp. EuI1c] Length = 380 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 95/338 (28%), Positives = 155/338 (45%), Gaps = 46/338 (13%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LALA + L + ++ + T+GDR ++++G G++ Sbjct: 40 LRLGTRRSALALAQSGMVADELRTRL---GIEVDLVHVVTEGDRNRAE-ISQLGSTGVWV 95 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + L+SGE+D AVHS KD+PT +G+ ++A PRED+RDV +S T ++L L + Sbjct: 96 SALREALLSGEVDLAVHSLKDLPTAPPEGITLAAIPPREDVRDVLVSPTGRTLAQLGPGA 155 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGT + RR A L + V+ RG ++TR+ K + + A++LA AG+ RL + I Sbjct: 156 RIGTGAPRRAAQLRALGLGLDVVPIRGNVDTRIKKAIDGEVDAVVLARAGLARLDRLDAI 215 Query: 186 KEILNIEDFPPSPGQGAICIET-----------HVNNPK--------------------- 213 E+L E P+PGQGA+ IE V P+ Sbjct: 216 TELLEPEVMLPAPGQGALAIECVATTLAPLTLLTVGTPEDQGAVTGMSCPVAPGSGVEIP 275 Query: 214 AQELVK-VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC---------KGSTLYFYG 263 + L++ V++ + +V ERAFLA ++ C + + A + Sbjct: 276 LERLLRFVLDDAPSSVAVRAERAFLAAIEAGCTAPVGALAQVLPARGQAPASEGEVRLRA 335 Query: 264 IVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 +V + DG G+ D +GR A + Sbjct: 336 VVASLDGTTVLRRELGGSTADPEALGRRLADDLLSAGA 373 >gi|307595857|ref|YP_003902174.1| porphobilinogen deaminase [Vulcanisaeta distributa DSM 14429] gi|307551058|gb|ADN51123.1| porphobilinogen deaminase [Vulcanisaeta distributa DSM 14429] Length = 304 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 92/300 (30%), Positives = 148/300 (49%), Gaps = 8/300 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S L+L + + V P +I + T GD I ++ L IG KG+F Sbjct: 3 IRIATRGSRLSLIQTEIVMNMIRRVE--PNVRFDVIIVRTTGDVIQDKPLYAIGVKGIFE 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS--LKDLAL 123 +E+ L+ E D AVHS KD+P+++ GL ++ + PR+ DV + L L Sbjct: 61 KEVNLALLRNEADIAVHSLKDLPSEISPGLVVAGFSPRDPPFDVLVVKDDYPSELMALPS 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL---- 179 + +GTSS+RR+A LL R DIS+ RG ++TR+NKL AI++A AG+ RL Sbjct: 121 GARVGTSSVRRRAFLLNVRRDISINVIRGNVDTRINKLIRGDYDAIVIAEAGLVRLINDV 180 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 K + ++ + PP+PGQG I + + +L+ + ERAFL Sbjct: 181 KSLNIKYTRISPDVLPPAPGQGIIAVVAREKDTDLVDLLNKASDPKARAEALAERAFLRT 240 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + G C + G A +G+ + F + +G+ V +G+ + +G +AA+ + Sbjct: 241 IGGGCHVPVGGMAIHEGARMEFIAGMADLNGERKVLVKLSGSPSNPEELGVNAARELLKR 300 >gi|256088596|ref|XP_002580415.1| hydroxymethylbilane synthase; porphobilinogen deaminase [Schistosoma mansoni] gi|238665988|emb|CAZ36654.1| hydroxymethylbilane synthase [Schistosoma mansoni] Length = 411 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 90/300 (30%), Positives = 144/300 (48%), Gaps = 27/300 (9%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+G+R S LAL + L + P ++ ++T GD+I + +L++IG K Sbjct: 7 RNVVRVGSRRSNLALLQTGMAVNLLQK--QNPHILFEVVEMATVGDKILDVSLSKIGDKS 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSLK 119 LFT+E+E L+SGE+D VHS KD+P+ L GL + R DV + + + L Sbjct: 65 LFTKELENALLSGEVDLVVHSLKDVPSTLPSGLVLGCVFARVSPEDVVLMAPHYRGRKLS 124 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-------------- 165 DL + S +GTS++RR A L R + + RG + TRL KL+ Sbjct: 125 DLPIGSTVGTSAVRRVATLTRKYPHLKFVSIRGNLNTRLAKLDTPPASKDNCCSGNPSPS 184 Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED 225 AI+LA AG++R+ I ++L D + QGA+ E + + +L+ I+ E Sbjct: 185 YDAIILAKAGVERMGWSHRIDQVLT--DSFYAVSQGALACECRLVDNFIMDLLSHIHDES 242 Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFA--YCKGS----TLYFYGIVLASDGKIFHEVSRN 279 + ER+ + +LDG C I + KG L + +L+ DG E S + Sbjct: 243 AALTTIAERSLMRQLDGGCSIPIGVRSDLVLKGDLNYYQLTLHANILSVDGGKSIERSAS 302 >gi|302875078|ref|YP_003843711.1| porphobilinogen deaminase [Clostridium cellulovorans 743B] gi|307690298|ref|ZP_07632744.1| porphobilinogen deaminase [Clostridium cellulovorans 743B] gi|302577935|gb|ADL51947.1| porphobilinogen deaminase [Clostridium cellulovorans 743B] Length = 300 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 104/301 (34%), Positives = 159/301 (52%), Gaps = 10/301 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK RIGTR S LAL ++ H P N ++ +STKGD I +++L GGKG Sbjct: 2 KKIIRIGTRKSKLALMQTNIVIDAIKKKH--PEINCEVVEMSTKGDEILDKSLLSFGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDL 121 F E EK + SGEID AVHSAKDMP LL GL+I A RED RDV + ++ ++ D Sbjct: 60 AFVSEFEKAIKSGEIDLAVHSAKDMPMDLLTGLKIVAVTKREDPRDVLVTANNKDTINDF 119 Query: 122 AL-HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +IGT+SLRRK + R +++ D RG ++ RL KL + + I+LA AG+KRL Sbjct: 120 NKTNKLIGTTSLRRKLQIKRLLNNVDTKDLRGNVQRRLEKLISGEYDGIILAAAGLKRLG 179 Query: 181 KEKVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + L++EDF P+ GQG I +E + L I++E+ S+ ER + Sbjct: 180 LLDDERINLNYLSVEDFIPAGGQGIIAVEGRAE-EEFSFLKDSIHNEEAMYSLEVERYVM 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +L+ C I +++ T++ I+ +GK+ + + + + + + I Sbjct: 239 KKLNAGCNEPIGAYSFIDKDTIFLD-IIYEHNGKVS-RKKGSDSIENRLKLTEKLVEEIL 296 Query: 298 F 298 Sbjct: 297 Q 297 >gi|169631071|ref|YP_001704720.1| porphobilinogen deaminase [Mycobacterium abscessus ATCC 19977] gi|238054424|sp|B1MHI5|HEM3_MYCA9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|169243038|emb|CAM64066.1| Porphobilinogen deaminase (HemC) [Mycobacterium abscessus] Length = 306 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 92/310 (29%), Positives = 138/310 (44%), Gaps = 15/310 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L H ++ ++T GD + E G G+FT Sbjct: 2 IRIGTRGSLLATTQAGGIRDALRAK----GHEAELVIVTTAGD--QSAAPVEQIGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + +D AVHS KD+PT I A PRED RD ++ L +L S Sbjct: 56 AALREAIADDVVDVAVHSYKDLPTAADPRFVIPAIPPREDYRDALVARDGLVLGELPAGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS RR A L + + RG ++TRL++++N +++A AG+ R+ + I Sbjct: 116 VIGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLSRVSNGDLDGVVVARAGLARIGRLDHI 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ +E ++ ++H DT +V ERA LAEL+ C Sbjct: 176 TETLEPVQVLPAPAQGALAVECRSEATDLVAVLAELDHADTRAAVTAERALLAELEAGCT 235 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G A DG S G A +G A+ + Sbjct: 236 APVGAIAEVVESIDEEGRVFDELSLRGCAAALDGSDVIRASGIGTPDRAAELGLAVAREL 295 Query: 297 RFISNKNVFN 306 + + + Sbjct: 296 LDLGARALIG 305 >gi|15668749|ref|NP_247548.1| porphobilinogen deaminase [Methanocaldococcus jannaschii DSM 2661] gi|2495178|sp|Q57989|HEM3_METJA RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|1591276|gb|AAB98563.1| porphobilinogen deaminase (hemC) [Methanocaldococcus jannaschii DSM 2661] Length = 292 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 89/297 (29%), Positives = 140/297 (47%), Gaps = 12/297 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + L ++ + + I + T GDR+ ++ L++IG G+FT Sbjct: 2 IRIGTRGSKLALYQANKVAELLKNL----GYKVEIKIIKTTGDRVLDKKLSDIG-IGVFT 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ +++ EID AVHS KD+PT + L + A L R+ D+ I + + Sbjct: 57 KELDLAMLNNEIDIAVHSLKDIPTIWNENLMVGAVLERDSYHDLLIWNKDIDFNE-DSKI 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS+RR+A L + RG ++TRL KL AI+L+ AGI RL Sbjct: 116 VIGTSSMRRRAFLKFIYPNAKFELLRGNVDTRLRKLKEGLYDAIVLSEAGIIRLGVSLED 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ P+P QG I + ++ + + ++K INHE T+ CER L E G C Sbjct: 176 FNYKRLDI-LPAPAQGIIAVACKRDDEEMKSILKEINHERTYLESLCERTALNEFGGGCS 234 Query: 246 SAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIR 297 A L V+ +D + A+ +G+ ++ Sbjct: 235 VPFGALAVYDEKNELLKLKAAVVTNDELKNASGEVKCKIDEIDKAVELGKKIGLKLK 291 >gi|91773206|ref|YP_565898.1| porphobilinogen deaminase [Methanococcoides burtonii DSM 6242] gi|121684353|sp|Q12WM8|HEM3_METBU RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|91712221|gb|ABE52148.1| porphobilinogen deaminase [Methanococcoides burtonii DSM 6242] Length = 309 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 98/303 (32%), Positives = 153/303 (50%), Gaps = 8/303 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LA+A A L + N+ + T GD T+R L E+ G G+F Sbjct: 1 MILGTRGSALAIAQADLVTKMLEEKGHELTRNV----IKTSGDVFTDRPLHEVAGVGVFV 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E++ ++I GE+D AVHS KD+PT L I+A L R+ DV ++ +L +L + Sbjct: 57 RELDDRMIEGEVDIAVHSMKDLPTVRPPELAIAAVLKRDSPYDVLLTADGSTLDELPDGA 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +IGT+S+RR+A LLR+R D++V D RG I TR+ KL + ILLA AG++R+ + Sbjct: 117 IIGTTSMRRRAQLLRYRPDLNVEDLRGNINTRIQKLKAGQYDGILLAEAGLQRMGW-DMD 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E F PS QG I + T ++ +A+ V+NHE + ER + +++G C Sbjct: 176 VQRLPAEAFCPSANQGTIVVVTRADD-EAERACSVLNHERSRMETEVERLLITDVEGGCI 234 Query: 246 SAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 I FA G ++ VLA DG + + + + + + K Sbjct: 235 VPIGSFAQMNEDGDEIHVLVEVLAVDGTREIRIEDDIPVKNYREHALSIGRMLVEMGGKE 294 Query: 304 VFN 306 + Sbjct: 295 LVQ 297 >gi|73668987|ref|YP_305002.1| porphobilinogen deaminase [Methanosarcina barkeri str. Fusaro] gi|121731279|sp|Q46CH0|HEM3_METBF RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|72396149|gb|AAZ70422.1| hydroxymethylbilane synthase [Methanosarcina barkeri str. Fusaro] Length = 316 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 103/304 (33%), Positives = 152/304 (50%), Gaps = 9/304 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG-GKGLF 64 IGTR S LALA A L + + T GDR T+R L + G G F Sbjct: 1 MIIGTRGSQLALAQAETVARLLKAK----GVETSLKIIKTSGDRFTDRPLHAVSSGVGAF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 E+++ ++ G+ID AVHS KDMPT L A L R+ D+ +++ L +L+ Sbjct: 57 VRELDEVMLEGKIDIAVHSMKDMPTIRPPTLPTVAVLKRDTPFDLLLTYDGTPLDELSEQ 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S+IGTSSLRR A + R+R D+ D RG I+TRL KL K ILLA AG++R+ E + Sbjct: 117 SIIGTSSLRRAAQIKRYRPDLVTQDLRGNIDTRLRKLKEGKYDGILLAKAGLERMGWE-L 175 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 EIL+ + F PSP QG I + T +A+ V ++H D+ + ER ++EL G C Sbjct: 176 EGEILSPDFFCPSPNQGTIAVVTRAE-TEAEAAVSRLDHTDSRIATEIERILISELGGGC 234 Query: 245 KSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 + I +A L+ VL+ DG+ ++ I R+ + + K Sbjct: 235 TTPIGSYAEIMPDRKKLHVRAEVLSLDGEETVGINEFIPMAGGIEKARELGSSLVHMGGK 294 Query: 303 NVFN 306 + + Sbjct: 295 KLAD 298 >gi|297563292|ref|YP_003682266.1| porphobilinogen deaminase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847740|gb|ADH69760.1| porphobilinogen deaminase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 335 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 94/310 (30%), Positives = 150/310 (48%), Gaps = 13/310 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S +A + + ++ I + +++ GD +T LT++GG G+F Sbjct: 20 PARLGTRRSTMATSQSRMVADAITART---GRVIELELITSFGD-VTKAHLTQLGGTGVF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + +L +G +D AVHS KD+PT +GL ++A R+D RD + DL Sbjct: 76 VNALRDELHAGTVDFAVHSLKDLPTTPAEGLVLAAIPERDDPRDALCARDGLKFADLPAG 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGT S RR A L R D+ + RG ETRL K+ + + A++LAYAG+ R+ + + Sbjct: 136 ARIGTGSPRRVAQLAALRPDLVYVPIRGNAETRLGKVASGELDAVVLAYAGLGRVGRTED 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKA-QELVKVINHEDTWDSVNCERAFLAELDGS 243 + E+ E P+PGQGA+ +E V + ++H T V ER L+EL+ Sbjct: 196 VTEVFEPEQMLPAPGQGALAVECSVERLDGDLAYLASVDHPATRAEVVAERTVLSELEAG 255 Query: 244 CKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRN------GNRCDAINIGRDAAQY 295 C + + +A T L V+A+DG R G+ A +GRD A+ Sbjct: 256 CAAPVGAYAQYDAETGRLRLRAAVVATDGAEAVRRERAADLASPGDLAAATALGRDLARQ 315 Query: 296 IRFISNKNVF 305 + + Sbjct: 316 MIAEGADRIV 325 >gi|89889812|ref|ZP_01201323.1| porphobilinogen deaminase [Flavobacteria bacterium BBFL7] gi|89518085|gb|EAS20741.1| porphobilinogen deaminase [Flavobacteria bacterium BBFL7] Length = 317 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 102/313 (32%), Positives = 157/313 (50%), Gaps = 19/313 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LA+ A +S L + + P+ ++GD + L E+G Sbjct: 1 MSLK-IRIGTRDSQLAMWQATTVQSQLNAL----GFQTELAPVKSQGDLNLDEPLYEMGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ L+ G+ID AVHS KD+PT+L KG+ +A L R +D+ + +S + Sbjct: 56 TGIFTKTLDVALVKGDIDIAVHSLKDVPTQLPKGMVQAAVLERASQKDILV---YKSSFN 112 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKRL 179 I T SLRRKA L + V+D RG + TRL+KL+ N +A + A AG+ R+ Sbjct: 113 PDEAMTIATGSLRRKAQWLNMYAQHHVVDLRGNVNTRLSKLHSNKDWNAAIFAKAGLDRI 172 Query: 180 KKEKVIK-----EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 ++ E +++ F P+P QGAI I +N E V +NH T V+ ER Sbjct: 173 GLLSQLRGNYGFEYSDLDSFVPAPAQGAIMIAAMGHNTAVLEAVSQLNHAQTQRCVDIER 232 Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA-INIGRDAA 293 FL EL+G C + I A + + F G +L+ DG +V N + +++G A Sbjct: 233 RFLRELEGGCTAPIGAIAQVHDNKIDFTGCLLSIDGTERIDVKDQINLTETDVDLGLAFA 292 Query: 294 ----QYIRFISNK 302 + + K Sbjct: 293 KAQSEKVFAKGGK 305 >gi|301630715|ref|XP_002944462.1| PREDICTED: porphobilinogen deaminase-like, partial [Xenopus (Silurana) tropicalis] Length = 291 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 88/281 (31%), Positives = 122/281 (43%), Gaps = 33/281 (11%) Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT--- 114 IG K LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H Sbjct: 1 IGEKSLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPYDAVVFHPKRY 60 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAY 173 +L L SVIGTSSLRR A L + + D RG + TR+ KL+ + AI+LA Sbjct: 61 GNTLSTLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRMKKLDEKEDFSAIILAA 120 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG++R+ E I +IL ++ + GQGA+ IE + +V + +T E Sbjct: 121 AGLRRMGWENRIGQILTSDECLYAVGQGALAIEVRAKDQDILSMVSALQDPETVLRCIAE 180 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV-----------SRNGNR 282 RAF+ L+G C +A K S LY G V + DG + G Sbjct: 181 RAFMKRLEGGCSVPVAVNTVVKDSQLYLTGAVYSLDGSDSLKETMQSCINFPQQEVEGPN 240 Query: 283 CD------------------AINIGRDAAQYIRFISNKNVF 305 D A +G A + K + Sbjct: 241 DDVQHVGITALGVSHQALESAECLGTGLADLLLSKGAKEIL 281 >gi|11498841|ref|NP_070070.1| porphobilinogen deaminase [Archaeoglobus fulgidus DSM 4304] gi|6225498|sp|O29026|HEM3_ARCFU RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|2649337|gb|AAB90000.1| porphobilinogen deaminase (hemC) [Archaeoglobus fulgidus DSM 4304] Length = 289 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 95/297 (31%), Positives = 146/297 (49%), Gaps = 17/297 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +GTR S LALA + L + + + I + T GD + ++ L E G G F Sbjct: 2 KLIVGTRGSKLALAQTNKVAERLKERY-----EVEIRIVKTAGDIMKDKPLYEFKGMGAF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 ++ L G++D AVHS KD+P++ ++G ++A + R+ DV IS +L++L Sbjct: 57 VRALDTALAEGKVDVAVHSFKDVPSQRVEGTVVAAVIERDSPCDVLISRDGSTLEELDEG 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183 +V+GTSSLRR+A L R R D+ + RG ++TRL KL AI++A AG+KRL + + Sbjct: 117 AVVGTSSLRRRAQLSRLRGDLRFENLRGNLDTRLRKLREGNYDAIVVAEAGLKRLGLDRE 176 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V + E P QG I I T LV +N E TW ERA + EL Sbjct: 177 VEYQPFPPEVIVPPANQGIIAIATRKGEED---LVAFLNDEKTWLEAMVERAVIKELGVG 233 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS----RNGNRCDAINIGRDAAQYI 296 C + +A + S + +L K + V ++ +A IG+D + I Sbjct: 234 CAVPVGVYAEAQ-SRVRLICEILD---KKYLRVEEKLSKDTAVEEAAEIGKDLRKEI 286 >gi|312888384|ref|ZP_07747960.1| porphobilinogen deaminase [Mucilaginibacter paludis DSM 18603] gi|311299218|gb|EFQ76311.1| porphobilinogen deaminase [Mucilaginibacter paludis DSM 18603] Length = 526 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 89/266 (33%), Positives = 139/266 (52%), Gaps = 16/266 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + IGTR S LAL A ++ L + + + T+GDRI N + ++ G Sbjct: 1 MFDRKLIIGTRGSELALWQANFVKNKLAEN----GIQADLKIIKTQGDRILNLSFDKLEG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIR-------DVFISH 113 KG FT+E+E++L++G ID AVHS KD+PT+ GL I+A RED D H Sbjct: 57 KGFFTKELEEELLAGTIDLAVHSHKDLPTENPPGLTIAAVSEREDPAELLLVLKDCVDVH 116 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173 S+K ++GTSS RRKA LL R D+ + + RG + TR+NKL N AI++A Sbjct: 117 QKLSVK---YGGIVGTSSNRRKAQLLAVRPDLEIDELRGNVPTRINKLRNEDYDAIMIAK 173 Query: 174 AGIKRLKKE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 AG+ RL + + E + + P+P QG + I+ + + E ++++NH D + + Sbjct: 174 AGVVRLGLDMSEFHVEEIPPTELIPAPAQGVLAIQVREADTELFEALQILNHPDVAEELA 233 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGS 257 ER+ L G C + + + + Sbjct: 234 VERSLLKLFGGGCHLPLGCYCRKRDN 259 >gi|15828303|ref|NP_302566.1| porphobilinogen deaminase [Mycobacterium leprae TN] gi|221230780|ref|YP_002504196.1| porphobilinogen deaminase [Mycobacterium leprae Br4923] gi|13093996|emb|CAC31937.1| porphobilinogen deaminase [Mycobacterium leprae] gi|219933887|emb|CAR72519.1| porphobilinogen deaminase [Mycobacterium leprae Br4923] Length = 318 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 89/308 (28%), Positives = 144/308 (46%), Gaps = 15/308 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H ++ ++T GD+ ++ ++ +G G+FT Sbjct: 5 IRIGTRGSLLATTQAALVRDALIAN----GHPAELVIVNTAGDQ-SSASIDSLG-VGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + G +D AVHS KD+PT ++A PR D RD ++ L +L S Sbjct: 59 TALRAAIEEGCVDAAVHSYKDLPTADDPRFTVAAIPPRNDPRDAVVTRDELVLAELPAGS 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + + Sbjct: 119 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDEV 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ P+P QGAI +E + + ++ ++ DT +V ER LAEL+ C Sbjct: 179 TETLDPVQMVPAPAQGAIAVECRAGDSRLVAVLAALDDADTRAAVTAERVLLAELEAGCS 238 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V A DG S A +G A + Sbjct: 239 APVGAIAQVVESIDGEGRVFEELSLRGCVAALDGSDVIRASGISTSGRASELGLAVAVEL 298 Query: 297 RFISNKNV 304 + + + Sbjct: 299 FELGAREL 306 >gi|326428753|gb|EGD74323.1| uroporphyrinogen decarboxylase [Salpingoeca sp. ATCC 50818] Length = 737 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 99/337 (29%), Positives = 155/337 (45%), Gaps = 36/337 (10%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++ + IGTR S LAL A L V K P H I + T GD+ L + G G Sbjct: 374 QRVYTIGTRGSVLALWQAHYVLDRL--VKKYPTHRFRIKVVDTAGDKDLTTALDKFGTTG 431 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-----AQS 117 +FT+ +E+ L+SGE+DC VHS KD+P+ L +++A R D RD + + S Sbjct: 432 VFTDALERALVSGEVDCVVHSLKDVPSTLHPSTRLAAISERHDPRDCVVFNPRHNGRYSS 491 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAG 175 + DL SV+GTSS RR+A L R ++ RG ++TRL KL++ N A++LA AG Sbjct: 492 IADLPPGSVLGTSSARRRAFLARAYPSLTFKHVRGNVKTRLRKLDDPANGYDALVLASAG 551 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK---------------------- 213 ++RL E + E L+++ P + GQ A+ ++ + Sbjct: 552 LERLNMEARVGEKLSVDVVPHAVGQAALGVQVRCSAKPGPHGGEGGDDDDDDGDKDAAVL 611 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGK 271 A+ L + +T + ER FL L G C IA + T + G V + DGK Sbjct: 612 AEMLHASVQCNETALVCSAERGFLRSLGGGCSLPIAVRSQRDADTGRIVLCGNVCSVDGK 671 Query: 272 IFHEVSRNG---NRCDAINIGRDAAQYIRFISNKNVF 305 + + +A +G A ++ + + Sbjct: 672 TLASRTCDAVVTTEAEAAALGEKVAADLKADGGEAIL 708 >gi|13627125|sp|Q49808|HEM3_MYCLE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 315 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 89/308 (28%), Positives = 144/308 (46%), Gaps = 15/308 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H ++ ++T GD+ ++ ++ +G G+FT Sbjct: 2 IRIGTRGSLLATTQAALVRDALIAN----GHPAELVIVNTAGDQ-SSASIDSLG-VGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + G +D AVHS KD+PT ++A PR D RD ++ L +L S Sbjct: 56 TALRAAIEEGCVDAAVHSYKDLPTADDPRFTVAAIPPRNDPRDAVVTRDELVLAELPAGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + + Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDEV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ P+P QGAI +E + + ++ ++ DT +V ER LAEL+ C Sbjct: 176 TETLDPVQMVPAPAQGAIAVECRAGDSRLVAVLAALDDADTRAAVTAERVLLAELEAGCS 235 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V A DG S A +G A + Sbjct: 236 APVGAIAQVVESIDGEGRVFEELSLRGCVAALDGSDVIRASGISTSGRASELGLAVAVEL 295 Query: 297 RFISNKNV 304 + + + Sbjct: 296 FELGAREL 303 >gi|32474491|ref|NP_867485.1| porphobilinogen deaminase [Rhodopirellula baltica SH 1] gi|39931387|sp|Q7UPN0|HEM3_RHOBA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|32445029|emb|CAD75031.1| porphobilinogen deaminase [Rhodopirellula baltica SH 1] Length = 337 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 97/324 (29%), Positives = 149/324 (45%), Gaps = 29/324 (8%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLA+ A L I+PL +KGD R + GLFT Sbjct: 12 LRIATRESPLAMWQAEHVAKLLKKH----GFQTEIVPLVSKGDTDM-RPIDGTRQVGLFT 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-------- 117 + I++ L+ E D AVHS KD+PT+ ++A PRE + D + Sbjct: 67 KRIQQALVDDEADVAVHSLKDLPTEPDSRFVLAAVPPRESVLDALVFADNSPHLESQTGA 126 Query: 118 ---LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 L L + +GT S RR A L + R D+ V+ RG ++TRL KLN + AI+LA+A Sbjct: 127 ESPLDYLPQGARVGTGSTRRLAQLKQLRPDLEVLPIRGNVQTRLAKLNAGEFDAIVLAHA 186 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 GI RL+ + + +++ P+PGQGA+ IE ++ A + + +N + ER Sbjct: 187 GILRLEMTDLPHRLFPLDEMIPAPGQGALGIEVRSDDAGAMDAIANLNDAAARLAATAER 246 Query: 235 AFLAELDGSCKSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNGN--------- 281 L+EL G C + IA A + G+ L IV+++DG+ + Sbjct: 247 KVLSELHGGCLAPIACHAKLETSNHGTELCLRAIVMSADGEQRLQEDARITVQPNDADLH 306 Query: 282 RCDAINIGRDAAQYIRFISNKNVF 305 +A +G A+ +R + Sbjct: 307 VAEAHELGTLVAKRLRDKGADKLI 330 >gi|288932129|ref|YP_003436189.1| porphobilinogen deaminase [Ferroglobus placidus DSM 10642] gi|288894377|gb|ADC65914.1| porphobilinogen deaminase [Ferroglobus placidus DSM 10642] Length = 292 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 98/299 (32%), Positives = 155/299 (51%), Gaps = 10/299 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ IG+R S LALA A + + L + + + + T GD + ++ L E G Sbjct: 1 MSERVV-IGSRGSKLALAQAEKVKKLLEER----DFEVEVKVIKTHGDIMKDKPLHEFKG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G F I++ L GEID AVHS KD+P++ ++G I+A L RE D FIS ++ Sbjct: 56 MGAFVRAIDEALKRGEIDLAVHSYKDVPSQRVEGTVIAAVLERESACDAFISREGLKFEE 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + + S IGTSSLRR+A + + R D+ V + RG ++TRL KL I++A AG+ RL Sbjct: 116 MPVASKIGTSSLRRRAFVKKLRKDLEVENLRGNLDTRLRKLREGFYDGIIVAEAGLIRLG 175 Query: 181 KE-KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ E LN E F PS QG I + + N + L +NHE T + ERA L E Sbjct: 176 LDKEIEYERLNPEVFVPSANQGVIAVASRENEAE---LFSFLNHEKTRLETDVERAVLRE 232 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L C +A +G + +L+ +G+ V ++ +A+ + A+ ++ Sbjct: 233 LGIGCAIPAGIYAKAEG-KVRLIVEILSEEGEKSVRVDEKLSKENAVEEAVEIAKNLKS 290 >gi|302325361|gb|ADL24562.1| hydroxymethylbilane synthase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 351 Score = 278 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 95/352 (26%), Positives = 152/352 (43%), Gaps = 55/352 (15%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPP-----------HNIVIIPLSTKGDR 49 M RI TR S LALA +++ + + ++ ++T+GDR Sbjct: 1 MSDLKLRIATRKSALALAQTTMVADAIVAANSVIGNAADSNNARDSLTYELVSMTTEGDR 60 Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109 +++L GGKG+F +E+E L+ G D A+HS KDMP ++L +++A L RED RD Sbjct: 61 RLDKSLASFGGKGVFIKELEIALLEGRADIAIHSLKDMPAEVLPQFKLAAVLKREDPRDA 120 Query: 110 FISHTAQ---SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA 166 F+S DL + +GT S+RR L R D+ + RG I+TR+ KL + Sbjct: 121 FLSRGGSAGIRFMDLPAGARVGTGSIRRVVQLKALRPDLEYVPIRGNIQTRIGKLA--EL 178 Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVN----------NPKAQE 216 ++LA AG+KR+ + E + E P+ GQG + IET + + Sbjct: 179 DGVVLAAAGLKRMGLADQVTEYFSTEQMLPASGQGILAIETLNDATVQESRVTGRADLAQ 238 Query: 217 LVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY--CKGS----------------- 257 ++ +N T+ + E A+L L+ C+ +A FA C+ Sbjct: 239 ILARVNDVATYCIASAEMAYLKALNAGCQFPVASFAEFVCEDGIENRGTCGALEENANRI 298 Query: 258 --TLYFYGIVLASDGKIFHEVSRNGNRC--------DAINIGRDAAQYIRFI 299 TL GI + GN + N+G + A I+ Sbjct: 299 AQTLKIRGIYWDEKSEKLLRAEVAGNVDLNSEDCVQQSKNLGIELACAIQKQ 350 >gi|300782413|ref|YP_003762704.1| hydroxymethylbilane synthase [Amycolatopsis mediterranei U32] gi|299791927|gb|ADJ42302.1| hydroxymethylbilane synthase [Amycolatopsis mediterranei U32] Length = 309 Score = 278 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 85/307 (27%), Positives = 142/307 (46%), Gaps = 21/307 (6%) Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 GTR S LAL +L + I+ ++T GD+ + IG G+FT + Sbjct: 2 GTRGSKLALTQTGTVADALRAT----GVEVEIVKVTTPGDKSL-APIATIG-VGVFTSAL 55 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128 + L+ E+D VHS KD+PT G+ ++A PRED RD I+ +L +L S +G Sbjct: 56 REALLRNEVDVIVHSYKDLPTAPEPGITLAAVPPREDPRDALIARDGLTLGELPPGSTVG 115 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188 T + RR A L + ++ RG I+TR+ K+ + + A++LA AG+ R+ + I E Sbjct: 116 TGAARRTAQLRALGLGLEIVPIRGNIDTRMRKVTDGELDAVVLARAGLARVGLVEAITET 175 Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKV-INHEDTWDSVNCERAFLAELDGSCKSA 247 L+ P+P QGA+ +E + + L++ ++ E T +V ERA LA L+ C + Sbjct: 176 LDPIQMLPAPAQGALAVECRSADVDLEHLLRSTLDDEGTRAAVTAERALLAALEAGCSAP 235 Query: 248 IAGFAYCKGS---------TLYFYGIVLASDGKI----FHEVSRNGNRCDAINIGRDAAQ 294 + A + G A +G+ ++ A +G+D A Sbjct: 236 VGALAEIVEDLDAEGKVVERISLRGT-AAIEGEEGAVDMVRAIALADKDQAAQLGKDLAA 294 Query: 295 YIRFISN 301 + + Sbjct: 295 ELLDLGA 301 >gi|297180020|gb|ADI16245.1| porphobilinogen deaminase [uncultured bacterium HF0010_16H03] Length = 301 Score = 278 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 93/302 (30%), Positives = 153/302 (50%), Gaps = 5/302 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL A + + + + + +IP+S++GD +T++ L ++GGKGLF Sbjct: 2 KIRIATRKSPLALFQAEYVANQIKQLDQ--KIKVELIPMSSEGD-LTDKPLHQVGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + +E L++ D AVHS KD+P L K +I + R D+ ++ S K + Sbjct: 59 IKTLESALLNDSADIAVHSLKDVPANLEKNFKIISVCKRAAASDILLTKKGTSFKSMPEG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S+IGTSS RRKA + R D+S I RG I TR+NKL+ N +++A A ++RL Sbjct: 119 SIIGTSSPRRKAQIKILRPDLSTISVRGNIATRINKLHKNHFDGLIIAKAAMERLNLPFK 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + ++ P+ QG I IE +N +++ IN E ER+F+A+L+GSC Sbjct: 179 NTYEFSYQEMLPAATQGFIGIECIASNKDLIKMLGSINSEKDMILAEAERSFVAQLNGSC 238 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 S IA + + + + L+ +G K + + + +I + A+ Sbjct: 239 LSPIAIYCREESNQILISAKALSQNGDKQIFKEIISSHASINEDI-KSLAKEFISKGADK 297 Query: 304 VF 305 + Sbjct: 298 LI 299 >gi|212529280|ref|XP_002144797.1| hydroxymethylbilane synthase, putative [Penicillium marneffei ATCC 18224] gi|210074195|gb|EEA28282.1| hydroxymethylbilane synthase, putative [Penicillium marneffei ATCC 18224] Length = 336 Score = 278 bits (713), Expect = 6e-73, Method: Composition-based stats. Identities = 101/320 (31%), Positives = 148/320 (46%), Gaps = 17/320 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+K F+IGTR S LALA +L K P ++ I T GDR ++ K Sbjct: 10 ERKCFKIGTRKSKLALAQTDLVVEALKK--KYPQYDFNIETKDTAGDRDKITAFKDMTSK 67 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 L+TEE+E+ LI G+ID VHS KD+PT L + LPRED RDV I SL Sbjct: 68 NLWTEELEELLIGGQIDFIVHSLKDVPTILPPTCALGGVLPREDPRDVLIVKPGLPYTSL 127 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 +L SV+GTSS+RR A L + V RG IETRL KL+ + I+LA AG+ Sbjct: 128 SELPAGSVVGTSSIRRTAQLAMKFPHLKVQSVRGNIETRLAKLDAEDGPFTCIILAAAGL 187 Query: 177 KRLKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R I + L+ + + GQGAI IE ++ +++ + + T+ V ER Sbjct: 188 LRTGMGGRITQYLDSKSGSLLYAVGQGAIGIEIRSDDALVLDMLNNVGDQKTFKEVLTER 247 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNG---NRCDAI 286 + L ++G C + + + L+ I+++ DG + A Sbjct: 248 SLLRSIEGGCSAPLGVESEWVEDADGTTKLHVRSIIVSVDGTRHSTAELEKVIESPVAAE 307 Query: 287 NIGRDAAQYIRFISNKNVFN 306 G + AQ + + Sbjct: 308 TFGLELAQELVTNGAGPILE 327 >gi|295094641|emb|CBK83732.1| porphobilinogen deaminase [Coprococcus sp. ART55/1] Length = 350 Score = 278 bits (712), Expect = 7e-73, Method: Composition-based stats. Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 28/311 (9%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +KK ++GTR S LALA +L + + P + ++ +ST+GDR T+R L E GGK Sbjct: 38 QKKTVKVGTRSSKLALAQTELVIKALNE--RFPQVDFQMVTMSTRGDRDTSRALLEFGGK 95 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 +F EE E+ + G+ID AVHSAKDMP ++++GL IS LPR +D+ I + + D Sbjct: 96 AVFVEEFEEAIFKGDIDIAVHSAKDMPMEIMEGLTISGTLPRACPQDILIYKSGRIF-DR 154 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK- 180 V+GTSSLRR+ + + + RG + TR+ KL + + AI+LA AG++RL Sbjct: 155 NDSFVVGTSSLRRQYQIRDMYRNAECKNLRGNVGTRIQKLEDGEYDAIILAAAGLERLGV 214 Query: 181 ---------------KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED 225 K+++ ++ E P+ QG I IET + + ++V+ IN + Sbjct: 215 IEDKGNDSTECFEVHKDELTFRYISTESMLPAACQGIIAIETRTSG-EVYDMVRAINDTE 273 Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYF---YGIVLASDGK-----IFHEVS 277 + + CERA L+ L+ C I ++ G + +SD + H + Sbjct: 274 AYTQLTCERAVLSRLNAGCHEPIGVYSELHGDHMKLSLMKADAASSDKEKDEEIQIHRKT 333 Query: 278 RNGNRCDAINI 288 GN + + Sbjct: 334 VEGNTAEWEQL 344 >gi|167769475|ref|ZP_02441528.1| hypothetical protein ANACOL_00809 [Anaerotruncus colihominis DSM 17241] gi|167668443|gb|EDS12573.1| hypothetical protein ANACOL_00809 [Anaerotruncus colihominis DSM 17241] Length = 295 Score = 278 bits (712), Expect = 8e-73, Method: Composition-based stats. Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 7/300 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K ++G+R S LA+ A ++ + P + ++ + T GD+I +RTL +IGGKGL Sbjct: 2 KHLKVGSRESRLAVIQAKLAMDAVREW--DPEIELELVAMKTTGDKILDRTLDKIGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F E++ L++G +D VHS KD+P L L ++ + R D RD + + +L Sbjct: 60 FVRELDAALLNGMVDFTVHSCKDLPMDLDPRLPLAGFSKRADPRDALVLPNG--VYELDP 117 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 IG +S RR L + V RG ++TRL KL++ + A++LA AG+ RL E Sbjct: 118 AKPIGCASARRAVQLKKLFPGQPVAPVRGNVQTRLQKLDDGQYAALVLAAAGLVRLGLED 177 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + ++ P+ GQG + ++ + + D+ D ERAF+ LDG Sbjct: 178 RITRYFSTDEMLPAAGQGILAVQARAG--ENASYLSAFFDRDSADCALAERAFVRRLDGG 235 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C S A +A +G TL G+ + + G + G R +G + A+ I ++ Sbjct: 236 CTSPTAAYATVQGETLTLRGMDVTAKGAPVF-DTILGPRSQGEALGIELAERILQKRTED 294 >gi|289193013|ref|YP_003458954.1| porphobilinogen deaminase [Methanocaldococcus sp. FS406-22] gi|288939463|gb|ADC70218.1| porphobilinogen deaminase [Methanocaldococcus sp. FS406-22] Length = 292 Score = 278 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 92/297 (30%), Positives = 143/297 (48%), Gaps = 12/297 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IGTR S LAL A + L ++ +++ I + T GDR+ ++ L++IG G+FT Sbjct: 2 ITIGTRGSKLALYQANKVAELLKNL----GYDVKIKIIKTTGDRVLDKKLSDIG-IGVFT 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ +++ EID AVHS KD+PT + L + A L R+ D+ I + + Sbjct: 57 KELDLAMLNNEIDIAVHSLKDIPTIWNENLMVGAVLERDSYYDLLIWNKDVDFDE-NSKI 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSSLRR+A L + RG ++TRL KL N AI+L+ AGI RL + Sbjct: 116 VIGTSSLRRRAFLKFLYPNAKFELLRGNVDTRLRKLKENLYDAIVLSEAGIIRLGI-NLD 174 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + P+P QG I + ++ + ++++K INHE T+ CERA L E G C Sbjct: 175 DFNYKRLNILPAPAQGIIAVACKRDDEEMKDILKEINHEKTYLESLCERAALNEFGGGCS 234 Query: 246 SAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIR 297 A L V+ +D + AI +G+ ++ Sbjct: 235 VPFGALAVYDEKNEILKLDAGVVINDELKSASGEIKCKIDEIDKAIELGKKIGMKLK 291 >gi|304320177|ref|YP_003853820.1| porphobilinogen deaminase [Parvularcula bermudensis HTCC2503] gi|303299080|gb|ADM08679.1| porphobilinogen deaminase [Parvularcula bermudensis HTCC2503] Length = 324 Score = 278 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 111/283 (39%), Positives = 154/283 (54%), Gaps = 4/283 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN----IVIIPLSTKGDRITNRTLT 56 M KP RI +R SPLA+A A R L + I + T GDR+ N TL Sbjct: 1 MSFKPLRIASRRSPLAVAQALWVRDRLAEALGIDEVDRDAAFPHETFVTTGDRMLNPTLA 60 Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116 +IGGKGLFT+EIE L+ G+ D AVHS KDMP ++ GL ++A RED RD F++ + Sbjct: 61 DIGGKGLFTKEIEIALLDGQADIAVHSMKDMPAQMPPGLVLAAVPVREDPRDAFVTLDGR 120 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + + IGTSS RR+A L R R D++++ RG + TRL KL +A LA AG+ Sbjct: 121 PLDQMPAGARIGTSSTRRRAQLARLRPDLALVPMRGNVGTRLQKLAAGEAEGTFLAEAGL 180 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 +RL V +E L+ P+ GQGA+C++ + + IN+ T + ERA Sbjct: 181 RRLGMTDVKREALSPARMLPALGQGALCVQARSGDHETLSACAHINNRPTALAAAAERAL 240 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 ++ LDGSCK+ I G A G +L G +L DG+ R Sbjct: 241 ISGLDGSCKTPIGGLARQTGDSLILEGQILTPDGRRVLRGERT 283 >gi|291563543|emb|CBL42359.1| porphobilinogen deaminase [butyrate-producing bacterium SS3/4] Length = 827 Score = 278 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 96/302 (31%), Positives = 149/302 (49%), Gaps = 15/302 (4%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +++ RIGTR S LAL ++ P ++PL TKGD+I +L GGK Sbjct: 5 KRRTIRIGTRKSRLALVQTKMVAEAIEA--SCPEAKCELVPLMTKGDKILKTSLVAFGGK 62 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G F EE E+ L++G+ID AVHSAKDMP L GL I A L RED RDVF++ ++ + Sbjct: 63 GAFVEEFEQSLLNGDIDLAVHSAKDMPMDLSDGLCIGAVLKREDPRDVFVTVKGRTPERS 122 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +IGT S RR+ ++ D+ RG ++TRL KL + I+LA AG+ RL Sbjct: 123 PR--IIGTGSPRRQVQIMEH-GDMECRLLRGNVDTRLEKLYQGEYDGIILAAAGLNRLGL 179 Query: 182 EKVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E L E F P+ GQG I +E + + +++K +N ++ ++ ER L Sbjct: 180 FNDPRFSFEFLEPEMFLPAGGQGIIAVEAKKGS-EVLKILKKLNDKEAERALFAERKVLR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L C +A+ +A + T + + +G +G ++ A+ + Sbjct: 239 LLGAGCTAAVGVYAKEENGTFWMGLMRETKNG--LIRRKISGAPENS----MKLAELLVK 292 Query: 299 IS 300 Sbjct: 293 QG 294 >gi|145592441|ref|YP_001154443.1| porphobilinogen deaminase [Pyrobaculum arsenaticum DSM 13514] gi|158514284|sp|A4WN24|HEM3_PYRAR RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|145284209|gb|ABP51791.1| hydroxymethylbilane synthase [Pyrobaculum arsenaticum DSM 13514] Length = 297 Score = 278 bits (711), Expect = 9e-73, Method: Composition-based stats. Identities = 90/295 (30%), Positives = 142/295 (48%), Gaps = 8/295 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 + TR S L++ E + + V P I + T GD + ++ L +IG KG+F Sbjct: 3 LVVATRGSKLSMLQTEELLAQIKAVE--PSIEFEIKIVKTTGDEVQDKPLYQIGVKGIFE 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+ ++ GE D AVHS KD+P++L GL ++ + R D +S L+ L + Sbjct: 61 KEVNLAVLRGEADVAVHSLKDLPSELSPGLVLAGFSKRAPPFDAVVSTAGYVLETLPRGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--KKEK 183 ++GTSS+RR + R D+ V RG ++TR+NK+ K A ++A AGI RL Sbjct: 121 LVGTSSVRRAEFVKAIRPDVRVEPLRGNVDTRINKILQGKYDAAIMAVAGIYRLYGASPP 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + +L E PP PGQG + + +L+K + ER FL + Sbjct: 181 IKLAVLRPEVLPPPPGQGIVAAVVREADSWLIDLLKKASDPKASLEAIAEREFLKAVGAG 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C AI G A+ + T+ F + G + V G+ D + +GR AA+ IR Sbjct: 241 CHVAIGGVAFARNDTVEFIAGYAS--GGRKYIVRVVGD--DPVEVGRRAAEEIRK 291 >gi|220913234|ref|YP_002488543.1| porphobilinogen deaminase [Arthrobacter chlorophenolicus A6] gi|219860112|gb|ACL40454.1| porphobilinogen deaminase [Arthrobacter chlorophenolicus A6] Length = 332 Score = 278 bits (711), Expect = 9e-73, Method: Composition-based stats. Identities = 97/332 (29%), Positives = 157/332 (47%), Gaps = 33/332 (9%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL +T L V P + ++ + T GD + L+++GG G+F Sbjct: 2 TVRIGTRASKLALTQTQQTADQLAAVGGFP---VELVHIRTDGD-VLTGPLSQMGGTGVF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L+ E D AVHS KD+PT GL ++A R D+RDV + L DL Sbjct: 58 VAALRDALLRNECDVAVHSLKDLPTGAAVGLSLAATPKRVDVRDVLCARDGLKLADLPAG 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--------------NNKAHAIL 170 + +GT S RR A L R+D+ ++D RG ++TRL ++ + A++ Sbjct: 118 AKVGTGSPRRAAQLRAARADLEIVDIRGNVDTRLGRVPGLPGNATNEVVPGKSCDLDAVV 177 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNN------------PKAQELV 218 LA AG++R+ + + E L + P+ GQG++ IE+ + + + Sbjct: 178 LAAAGLERISRLDAVSEYLEPDVMLPAAGQGSLAIESRTADAPRKPGSTEGSQEVLAQAL 237 Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR 278 ++ DT +V ERA LA L+ C + + +AY KGS L+ +V A DGK R Sbjct: 238 AALDDPDTRLAVTAERALLARLEAGCAAPVGAYAYRKGSMLHLEAVVCAVDGKASVRDKR 297 Query: 279 NGN---RCDAINIGRDAAQYIRFISNKNVFNF 307 + A +G + A+ + ++ + Sbjct: 298 ATDGLTEVGATLLGIELAEVLLAGGAADIADL 329 >gi|227832129|ref|YP_002833836.1| Porphobilinogen deaminase [Corynebacterium aurimucosum ATCC 700975] gi|262184020|ref|ZP_06043441.1| porphobilinogen deaminase [Corynebacterium aurimucosum ATCC 700975] gi|254800247|sp|C3PKG2|HEM3_CORA7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|227453145|gb|ACP31898.1| Porphobilinogen deaminase [Corynebacterium aurimucosum ATCC 700975] Length = 296 Score = 278 bits (711), Expect = 9e-73, Method: Composition-based stats. Identities = 85/300 (28%), Positives = 144/300 (48%), Gaps = 8/300 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LA + + L + + ++T+GD N E G G+FT Sbjct: 2 LKIGTRGSLLATTQSGHVQEWLQQK----GYEAELHIVTTQGDV--NMAPVERIGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + + GE + AVHS KD+PT R+D+R+ I+ +LK+L + Sbjct: 56 QALREAVDRGECEIAVHSFKDLPTA-ADERFDLVVPQRQDVREALIARDGLTLKELPEGA 114 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTS+ RR + L R D+ + RG I+TR+ K+ + + A+LLAYAG+ R + Sbjct: 115 RVGTSAPRRISQLRAMRPDLDIRPLRGNIDTRMGKVTSGELDAVLLAYAGLVRAGYAERA 174 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+ + E F P+P QGA+ IE +A + + ++ + ER L++L+ C Sbjct: 175 TEVFDPEVFMPAPAQGALAIEAVKG-TEAAKAIALLADGPATAATRAERTVLSQLEAGCT 233 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + +A ++ +G L G V A DG G +A +GR ++ + +V Sbjct: 234 APVAATSHWEGEQLVVRGGVFALDGSRQLIAQAQGAASEAEELGRAVSKELFAQGAADVL 293 >gi|291546286|emb|CBL19394.1| hydroxymethylbilane synthase [Ruminococcus sp. SR1/5] Length = 257 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 91/259 (35%), Positives = 141/259 (54%), Gaps = 6/259 (2%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 + T GD I +RTL ++GGKGLF +E++K LI G +VHS KDMP ++ + L + A+ Sbjct: 1 MKTTGDIILDRTLDKVGGKGLFVKELDKALIDGRSILSVHSLKDMPMEVPEELPLLAFSK 60 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 RED RDV + S +L +G SSLRR L + D+ V RG ++TRL KL+ Sbjct: 61 REDPRDVLVLPEGAS--ELDKSKPLGCSSLRRTLQLKKLYPDMDVRSIRGNLQTRLRKLD 118 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 + A++LA AG+KRL I ++ P+ GQG + ++ +A + ++ Sbjct: 119 EGQYSALILAAAGLKRLGLGSRINRYFTADEIIPAAGQGILAVQGRKG--EAYDFLEGYC 176 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS-DGKIFHEVSRNGN 281 +D W + + ERAF+ LDG C S +A A G +Y G+ DG + + GN Sbjct: 177 DKDAWTAGSAERAFVKLLDGGCSSPVAAHAEILGDEIYLRGLYYNEKDGS-YVTGTLRGN 235 Query: 282 RCDAINIGRDAAQYIRFIS 300 + DA ++GR+ A+ +R Sbjct: 236 KADAESLGRELAETLRKKG 254 >gi|317026261|ref|XP_001389286.2| porphobilinogen deaminase [Aspergillus niger CBS 513.88] Length = 329 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 98/331 (29%), Positives = 140/331 (42%), Gaps = 41/331 (12%) Query: 1 MEKKP------FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT 54 M + R+GTR S LAL A L H P + +GD + Sbjct: 1 MSQNTTTTVQELRLGTRNSKLALVQAEHVSKELTSAH--PGVQFPWQTVVVRGDADKSSP 58 Query: 55 LTEIGG-----KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109 + G K ++TEE+E KL +GE+D VH KDMPT+L + + A + RED D Sbjct: 59 FLKFAGPSDAAKNIWTEEMETKLCAGELDLLVHCLKDMPTRLPETCTLGAIVYREDPTDA 118 Query: 110 FISH-----TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN- 163 + L L SV+GTSS RRKALL + V + RG + TRL KL++ Sbjct: 119 LVIKEGLRSQYTDLSQLPPGSVVGTSSTRRKALLRYRYPHLKVEECRGNLGTRLKKLDDP 178 Query: 164 -NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 AI+LA AG+ R+ E I + L +FP + GQGA+ IE + + + +V+ I Sbjct: 179 EGPFSAIILATAGMVRINLEDRITKRLPPSEFPYAVGQGALGIEIRKEDAQTKTMVRKIE 238 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG-------STLYFYGIVLASDGKIFHE 275 T ER+ L L G C S +A + + L V Sbjct: 239 DLVTRRICLAERSLLRTLQGGCSSPVAVHCTVEQAPTASSPAQLRLDAEV---------- 288 Query: 276 VSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 G DA +G AQ + + + Sbjct: 289 ----GTDEDAEALGATVAQQLLKNGGQALLE 315 >gi|327403451|ref|YP_004344289.1| Porphobilinogen deaminase [Fluviicola taffensis DSM 16823] gi|327318959|gb|AEA43451.1| Porphobilinogen deaminase [Fluviicola taffensis DSM 16823] Length = 304 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 94/259 (36%), Positives = 144/259 (55%), Gaps = 10/259 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL A + L + + I ++TKGD+I + + ++ GKG Sbjct: 2 RNIRIGSRGSDLALWQANHVKKQLEALGA----EVGITIITTKGDQIQDLSFDKLEGKGF 57 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD--- 120 FT+EIE+ L+ ID AVHS KD+ T +GL I+A RE+ DV + H KD Sbjct: 58 FTKEIEQALLDNSIDLAVHSHKDLETNTPEGLIIAAVSERENPADVLLIHPNAFDKDEFW 117 Query: 121 -LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR- 178 L +V+GTSS RRK+ ++ +RSDI + D RG + TRL KL + AILLA AG+ R Sbjct: 118 SLKKGAVVGTSSARRKSQVIAFRSDIEIKDLRGNVPTRLQKLIDGGYDAILLAKAGLDRL 177 Query: 179 -LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 L + + + +L+ E+F P+P QG + ++ N+ + ++ +NHED + ER L Sbjct: 178 QLDLKGMHEVVLDPEEFIPAPAQGVLALQIRENDNELYNFMQAMNHEDIQSQIALERNLL 237 Query: 238 AELDGSCKSAIAGFAYCKG 256 L G C+ + + +G Sbjct: 238 NRLQGGCQLPLGAYCPEEG 256 >gi|148271775|ref|YP_001221336.1| porphobilinogen deaminase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829705|emb|CAN00621.1| hemC [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 328 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 91/313 (29%), Positives = 152/313 (48%), Gaps = 17/313 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LALA + + + ++P++T GD + +L+ +GG G+F Sbjct: 13 TLRIGTRGSALALAQTRAIAAEITGAS---GLEVELVPVTTHGDT-SRESLSSLGGTGVF 68 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L+ GE D VHS KD+PT GL +++ RED RDV + +L L Sbjct: 69 ASALRESLLRGECDLVVHSLKDLPTAPYAGLTVASVPVREDPRDVLCARDGLTLATLPRG 128 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT S RR+A +L R D+ V+D RG I+TRL+++ A++LA AG++R+ + Sbjct: 129 ARVGTGSPRRRAQILAERPDLDVVDIRGNIDTRLSRVTAGDLDAVVLAAAGLERIGRIDA 188 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQ----ELVKVINHEDTWDSVNCERAFLAEL 240 E L ++ +P +PGQGA+ +E + + V+ ++ T +V ER LA L Sbjct: 189 ATEHLELDRWPTAPGQGALALEIRTEDAETHSVVGRAVEAVDDPFTHAAVLAERGVLAAL 248 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDA------ 292 + C + I +A + L +V DG S + D +G A Sbjct: 249 EAGCAAPIGAWATVTSARLALTAVVYRPDGTQRMAASHELDTAGLDLAQLGASASALSGP 308 Query: 293 -AQYIRFISNKNV 304 ++ + ++ Sbjct: 309 VSRELLDAGAADL 321 >gi|85374658|ref|YP_458720.1| porphobilinogen deaminase [Erythrobacter litoralis HTCC2594] gi|84787741|gb|ABC63923.1| porphobilinogen deaminase [Erythrobacter litoralis HTCC2594] Length = 292 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 153/288 (53%), Gaps = 4/288 (1%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 +A A ETR+ L H + ++P+ GD+I +R L EIGGK L+T+E++ L G Sbjct: 1 MAQAVETRNRLCAAHGWDEEAVELVPVVASGDKIQDRPLAEIGGKALWTKELDAWLGEGR 60 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 ID AVHS KD+ T + L I+A LPRED RDV + ++D+ + +GTS+ RR A Sbjct: 61 IDAAVHSMKDVETFRPEALHIAAILPREDKRDVLVGAAG--IEDIPKGAKVGTSAPRRAA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 +L R D+ V+ FRG + TRL KL +A LLA AG+KRL + + L ++++ P Sbjct: 119 QMLSLRPDVEVVTFRGNVATRLGKLEAGEADVTLLAAAGLKRLGELDIGS-PLELDEWLP 177 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + QGAI IE ++ A+ L+ I+H + + ERA LA L+G+C S IA A G Sbjct: 178 AAAQGAIGIECRADDAGARALLSPIDHAPSRAEIMAERALLAGLNGTCHSPIAVLAEAMG 237 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + L + + DG D I A + ++ + Sbjct: 238 NRLSIRATLYSPDGTDKVAGEGELALADYAAI-ERLAADLLDRASPAI 284 >gi|303244099|ref|ZP_07330437.1| porphobilinogen deaminase [Methanothermococcus okinawensis IH1] gi|302485484|gb|EFL48410.1| porphobilinogen deaminase [Methanothermococcus okinawensis IH1] Length = 311 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 97/314 (30%), Positives = 155/314 (49%), Gaps = 17/314 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IGTR S LALA + ++ L ++++ ++ I + T GD+ L+E+G G+F Sbjct: 2 KIIIGTRGSKLALAQTYYIKNLLENLNENLSIDVKI--IKTTGDKNQKSKLSELG-LGVF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E++ K+++ EID AVHS KD+PT + L ISA RE D+ I + + + Sbjct: 59 TKELDTKMLNNEIDIAVHSLKDVPTVWNENLTISATPKRESYHDLIIWNKNNDIDIEKDN 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 ++GTSS+RRKA L ++ RG I+TRL KL N AI+LA AG+ RLK + Sbjct: 119 LIVGTSSIRRKAFLSIKYPNLKTKLLRGNIDTRLRKLRENNYDAIILAEAGLNRLKIDLS 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ P+P QG I + + ++ + +++K IN T+ ER L E G C Sbjct: 179 EFNYKRLKI-LPAPAQGVIGVASRKDDKEIIDILKKINDNKTYLESIAERYALREYGGGC 237 Query: 245 KSAIAGFAYCK--GSTLYFYG-IVLASDGK---IFHEVSRNGNRCD---AINIGRDAAQY 295 ++ + + LY +V +GK I E + D A IG + Sbjct: 238 QAPFGALSKYDTKNNELYLTCDVVYTLNGKNNIISKEDKIQCDIEDIHLAKKIGIKLGKE 297 Query: 296 IR----FISNKNVF 305 I+ S K++ Sbjct: 298 IKEAESEKSEKHIL 311 >gi|323691803|ref|ZP_08106060.1| hypothetical protein HMPREF9475_00922 [Clostridium symbiosum WAL-14673] gi|323504169|gb|EGB19974.1| hypothetical protein HMPREF9475_00922 [Clostridium symbiosum WAL-14673] Length = 297 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 94/297 (31%), Positives = 144/297 (48%), Gaps = 6/297 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIG+R S LA+ + + V P + ++ + T GD I +++L +IGG Sbjct: 1 MINGTIRIGSRESVLAVIQSELIIEEIKRV--CPGVSAQLVTMKTTGDMILDKSLEQIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+++ L+ G D VHS KDMP ++ + L I AY RED RDV + L+ Sbjct: 59 KGLFVKELDRALLDGRCDLTVHSLKDMPMEVPERLPILAYSKREDKRDVLVLRKG--LES 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L VIGT S RR+ R D RG + TRL KL++ + A++LA AG+ R+ Sbjct: 117 LPAGPVIGTFSRRRRMQAARLYPDAVFKGIRGNLVTRLRKLDDGEYDALILAAAGLIRMG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++ PS GQG + ++ + +K ++ D+ ERAF+ L Sbjct: 177 FEGRISRYFSVDEIIPSAGQGIMAVQGRKED--YFPFIKEVDAPDSRAMALAERAFVRIL 234 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 DG C S A A LY G+ + G +A +G A ++ Sbjct: 235 DGGCSSPCAACAEAAAGRLYLRGLYYDEASDRYITGEMEGMAEEAEQLGVKLALTLK 291 >gi|85710451|ref|ZP_01041515.1| porphobilinogen deaminase [Erythrobacter sp. NAP1] gi|85687629|gb|EAQ27634.1| porphobilinogen deaminase [Erythrobacter sp. NAP1] Length = 292 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 149/288 (51%), Gaps = 4/288 (1%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 +A AFETR L H + ++P+ GD++ +R L EIGGK L+T+E++ L G+ Sbjct: 1 MAQAFETRERLCKAHGWAEGEVELVPVVASGDKVLDRPLAEIGGKALWTKELDAWLAEGK 60 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 ID AVHSAKD+ T + +A+LPR D RD + A S+ D+ + +GTS+ RR + Sbjct: 61 IDVAVHSAKDVETIRPDAFRFAAFLPRADRRDALVG--AASIADIPRGATVGTSAPRRAS 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 LL R D V+ FRG + TRL KL +A LA AG++RL + +V L D+ P Sbjct: 119 QLLNLRPDCKVVTFRGNVATRLGKLEAGEADVTFLAAAGLERLGQSEVGA-PLETGDWIP 177 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + QG I +E ++ +A EL+ I+H T + ERA LA+L G+C S +A Sbjct: 178 AAAQGVIALECRADDDEAGELLAAIDHAATRAELEAERALLAKLGGTCHSPVAVLCSGDA 237 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 L + + DG + + + D + A + + + Sbjct: 238 GELTMRAALFSPDGSERVDGEASFSAGDHAPV-HALAADLLHRATPAI 284 >gi|282165595|ref|YP_003357980.1| probable porphobilinogen deaminase [Methanocella paludicola SANAE] gi|282157909|dbj|BAI62997.1| probable porphobilinogen deaminase [Methanocella paludicola SANAE] Length = 303 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 104/301 (34%), Positives = 150/301 (49%), Gaps = 6/301 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA+A A + L + I + T GD T+ L + G G F Sbjct: 1 MRVGTRGSRLAMAQARKVCGLLSERGVEASPAI----IKTSGDVHTSEPLHAMKGVGAFV 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EI+ +L++GE+D AVHS KD+PTK +GL +A L RE DV ++ + L +L + Sbjct: 57 REIDDRLLAGEVDIAVHSLKDVPTKRPEGLATAAVLKRESALDVAVTREGKKLSELEEGA 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSS RR AL+ + + + RG ++TRL KL + AILLA AG+ RL +I Sbjct: 117 VVGTSSTRRAALIKKHYPHLRTNNIRGNVDTRLRKLGEGEYDAILLAEAGLIRLGM-DII 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 KE L+ DF PS QG I I P+ + V +N DTW ERA + LDG C Sbjct: 176 KERLDPYDFVPSANQGVIAIVARPGTPEF-DAVSALNDHDTWLETGVERAIASALDGGCV 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + + +A +G L VL+ DG+ V D A+ + +++ Sbjct: 235 APMGAYARLEGDGLDVVCEVLSLDGRRQARVRETIPVKDHERHALRLAEKLAACGGRDLV 294 Query: 306 N 306 Sbjct: 295 E 295 >gi|294637953|ref|ZP_06716220.1| hydroxymethylbilane synthase [Edwardsiella tarda ATCC 23685] gi|291088885|gb|EFE21446.1| hydroxymethylbilane synthase [Edwardsiella tarda ATCC 23685] Length = 230 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 89/215 (41%), Positives = 123/215 (57%), Gaps = 2/215 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++ RI TR SPLAL A R L + P I ++P+ T+GD + + L ++GGK Sbjct: 18 AQQTLRIATRQSPLALWQAHYVRDQL--LTHWPQLTIELVPMVTRGDVLLDTPLAKVGGK 75 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L+ G D AVHS KD+P GL + PRED RD F+S SL L Sbjct: 76 GLFVKELELALLEGRADIAVHSMKDVPVAFPDGLGLVTICPREDPRDAFVSPHFASLDQL 135 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 136 PPGSIVGTSSLRRQCQLRAARPDLQIRDLRGNVGTRLAKLDAGEYDAIILAAAGLKRLQL 195 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE 216 E I+ L E P+ GQGA+ IE + + + Sbjct: 196 EARIRTPLTAEQSLPAVGQGAVGIECRLADEATRA 230 >gi|467039|gb|AAA17223.1| hem3b [Mycobacterium leprae] Length = 315 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 88/308 (28%), Positives = 143/308 (46%), Gaps = 15/308 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H ++ ++T GD+ ++ ++ +G G+FT Sbjct: 2 IRIGTRGSLLATTQAALVRDALIAN----GHPAELVIVNTAGDQ-SSASIDSLG-VGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + G +D AVHS KD+PT ++A PR D RD ++ L +L S Sbjct: 56 TALRAAIEEGCVDAAVHSYKDLPTADDPRFTVAAIPPRNDPRDAVVTRDELVLAELPAGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ R + + Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARPGRLDEV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ P+P QGAI +E + + ++ ++ DT +V ER LAEL+ C Sbjct: 176 TETLDPVQMVPAPAQGAIAVECRAGDSRLVAVLAALDDADTRAAVTAERVLLAELEAGCS 235 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V A DG S A +G A + Sbjct: 236 APVGAIAQVVESIDGEGRVFEELSLRGCVAALDGSDVIRASGISTSGRASELGLAVAVEL 295 Query: 297 RFISNKNV 304 + + + Sbjct: 296 FELGAREL 303 >gi|256787075|ref|ZP_05525506.1| porphobilinogen deaminase [Streptomyces lividans TK24] Length = 303 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 81/301 (26%), Positives = 149/301 (49%), Gaps = 17/301 (5%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 +A + + ++ V P + ++ ++T GD + L +IGG G+F + L+ GE Sbjct: 1 MAQSGQVADAVSQVTGRP---VELVEITTYGDT-SREHLAQIGGTGVFVAALRDALLRGE 56 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 +D AVHS KD+PT +GL ++A RED RDV ++ A+ L DL + +GT + RR A Sbjct: 57 VDFAVHSLKDLPTAQHEGLVVAAIPEREDPRDVVVARDARKLTDLPRGARVGTGAPRRMA 116 Query: 137 LLLRW----RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192 L + +I + RG ++TR+ + + + A++LA AG+ R+ + + + L+++ Sbjct: 117 QLNAYARTHGMEIETVPIRGNVDTRIGYVRSGELDAVVLAAAGLNRVGRIDEVTDFLSVD 176 Query: 193 DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252 P+PGQGA+ +E +N + ++ T +V ER+ LA L+ C + + A Sbjct: 177 TVLPAPGQGALAVECAADNASLIAALAELDDPFTRAAVTAERSLLAALEAGCSAPVGALA 236 Query: 253 YCKGS-----TLYFYGIVLASDGKIFHEVSRNGNRCD----AINIGRDAAQYIRFISNKN 303 + G+V +DG ++S G + A+ +G + A + Sbjct: 237 DLLADGQTVKEMRLRGVVGTTDGSTLVQLSTTGPVPETHEAALALGGELAAEMLAQGAAG 296 Query: 304 V 304 + Sbjct: 297 L 297 >gi|323484735|ref|ZP_08090094.1| porphobilinogen deaminase [Clostridium symbiosum WAL-14163] gi|323401972|gb|EGA94311.1| porphobilinogen deaminase [Clostridium symbiosum WAL-14163] Length = 297 Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 94/297 (31%), Positives = 144/297 (48%), Gaps = 6/297 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIG+R S LA+ + + V P + ++ + T GD I +++L +IGG Sbjct: 1 MINGTIRIGSRESVLAVIQSELIIEEIKRV--CPGVSAQLVTMKTTGDMILDKSLEQIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+++ L+ G D VHS KDMP ++ + L I AY RED RDV + L+ Sbjct: 59 KGLFVKELDRALLDGRCDLTVHSLKDMPMEVPERLPILAYSKREDKRDVLVLRKG--LES 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L VIGT S RR+ R D RG + TRL KL++ + A++LA AG+ R+ Sbjct: 117 LPAGPVIGTFSRRRRMQAARLYPDAVFKGIRGNLVTRLRKLDDGEYDALILAAAGLIRMG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++ PS GQG + ++ + +K ++ D+ ERAF+ L Sbjct: 177 FEGRISRYFSVDEIIPSAGQGIMAVQGRKED--YFPFMKEVDAPDSRAMALAERAFVRIL 234 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 DG C S A A LY G+ + G +A +G A ++ Sbjct: 235 DGGCSSPCAACAEAAAGRLYLRGLYYDEASDRYITGEMEGMAEEAEQLGVKLALTLK 291 >gi|311895732|dbj|BAJ28140.1| putative porphobilinogen deaminase [Kitasatospora setae KM-6054] Length = 323 Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 104/314 (33%), Positives = 161/314 (51%), Gaps = 16/314 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIGTR SPLALA ++L + +P +P++T+ D L ++GGKGL Sbjct: 9 RTLRIGTRSSPLALAQTDMVVAALRE--HVPDLVAETVPVTTEADLWQGD-LAQLGGKGL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMP--TKLLKGLQISAYLPREDIRDVFISHT---AQSL 118 +T++I+ L +G +D AVH KD+P L +GL +AY+ R D+RDV + ++L Sbjct: 66 YTKQIDAMLQAGAVDMAVHCVKDVPGDVPLPRGLVFAAYMERPDVRDVLLFPEGSGYRTL 125 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-----AHAILLAY 173 DL +VI +S++RRKA +LR R D+ V+ RG + +RL KL+ K A ++LA Sbjct: 126 ADLPPGAVILSSAVRRKAQILRARPDLEVVRVRGAVGSRLEKLDGAKQIDVHADGMVLAA 185 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG+ RL E +L++++ P+ G G + +E +P L++ INH T V E Sbjct: 186 AGLARLGIE-RPGYVLSMDEMLPAVGAGVLGLECRQGDPATAALLEKINHPRTQREVTAE 244 Query: 234 RAFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGN-RCDAINIGRD 291 R L L G C S IAG+ + L G+V +G F R D +G Sbjct: 245 RVLLHNLRGHCNSPIAGYCTTEPDGQLSLRGMVFDREGSKFANAMLWNEHRQDPATLGAR 304 Query: 292 AAQYIRFISNKNVF 305 A + + + Sbjct: 305 VAAELLRQGAREII 318 >gi|260905127|ref|ZP_05913449.1| glutamyl-tRNA reductase [Brevibacterium linens BL2] Length = 825 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 94/334 (28%), Positives = 151/334 (45%), Gaps = 40/334 (11%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + R+GTR S LA + + L + + I+ + T+GD + LT GG Sbjct: 475 SGRTIRLGTRRSKLARSQSTAIAHQLAALTGW---RVEIVEVVTEGDVNMS-PLTGFGGT 530 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F + + L G+ID AVHS KD+PT G+Q++A PR D DV I S +L Sbjct: 531 GVFVSAVRQALHQGKIDIAVHSLKDLPTTPEAGIQMAAIPPRVDPADVLIGRDGLSFAEL 590 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SV+GT S RR L R DI V RG ++TR+ + + + A++LA AG++R+ + Sbjct: 591 PAGSVVGTGSPRRAVQLRAARPDIEVRGVRGNVDTRIAHVRDGRLDAVVLAAAGVRRIGR 650 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETH-------------VNNPKAQELVKVINHEDTWD 228 + L+ + P+PGQGA+ +ET + + + +K ++ E T Sbjct: 651 LAEATDSLDFDTMLPAPGQGALAVETRGADSPFALDNEVMEADAEVRTQLKRLHDETTDL 710 Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR---------- 278 +V CERA L+ + C + I A +GS ++ DGK+ Sbjct: 711 AVTCERAILSRAEAGCSAPIGALATIQGSDFVVDAVMADDDGKLARTRQVAPLPTTPDVD 770 Query: 279 --NGNRCD-----------AINIGRDAAQYIRFI 299 +G+ A +G AA+ + Sbjct: 771 LDSGSANQLSITGKELARLADELGTAAAEDLLGQ 804 >gi|284161707|ref|YP_003400330.1| porphobilinogen deaminase [Archaeoglobus profundus DSM 5631] gi|284011704|gb|ADB57657.1| porphobilinogen deaminase [Archaeoglobus profundus DSM 5631] Length = 292 Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats. Identities = 108/301 (35%), Positives = 160/301 (53%), Gaps = 12/301 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ +GTR S LALA + L + +++ I + + GD + ++ L E G Sbjct: 1 MSERVV-VGTRGSKLALAQTSKVVERLKE----EGYSVEIRIIKSTGDIMKDKPLYEFKG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G F +E L+ GEID AVHS KD+P+ +L+G+ +SA L R+ D FI+ +SL++ Sbjct: 56 SGAFVRALEHALVRGEIDVAVHSYKDIPSNMLEGVTVSAVLERDSPYDAFIARNGESLEE 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + ++VIGTSSLRR+A L +RSD+ + RG ++TRL KL AI+LA AGI+RL Sbjct: 116 IKPNAVIGTSSLRRRAQLKLYRSDLRFENLRGNVDTRLRKLREGLYDAIVLAEAGIQRLG 175 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V + L IE F P QG I ++T V LVK +NHE+TW ER + L Sbjct: 176 L-NVKYQRLPIERFVPPANQGIIAVQTRVGEED---LVKFMNHEETWIEAEVERIVMKTL 231 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C +A C+G + V+ DG+ F + +R AI R+ A+ R Sbjct: 232 GVGCAIPAGIYAECRG-KVRLIVQVIR-DGREFKVIE-ELSRESAIEEAREIAENFREEV 288 Query: 301 N 301 Sbjct: 289 G 289 >gi|171914695|ref|ZP_02930165.1| Hydroxymethylbilane synthase [Verrucomicrobium spinosum DSM 4136] Length = 318 Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats. Identities = 105/313 (33%), Positives = 151/313 (48%), Gaps = 20/313 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG----- 59 R+GTR S LAL A ++L H P + ++T GD+ + +E Sbjct: 8 TLRLGTRGSELALRQAEMVEAALHAAH--PYLRVERKVIATTGDKRPDLRFSEFTEGDRL 65 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 KG+FT+E+E L SGEID AVHS KD+PT L + I+ LPR I DV IS +L Sbjct: 66 DKGIFTKELEIALASGEIDIAVHSLKDVPTVLDEKFFIAGVLPRAPIEDVLISREGYTLA 125 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKR 178 L + +GTSS+RR L + ++ RG + TR+ KL + AILLA AG++R Sbjct: 126 TLPAGAKVGTSSVRRIRQLQWLNPGVECVEIRGNVPTRIRKLFAPSDLDAILLARAGLER 185 Query: 179 LKKEK----------VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD 228 L + IL+ E+F P+ GQGAI IE V++ E +K INHE+T+ Sbjct: 186 LSLLDGEHVVVDGQPLHAVILDCEEFLPAAGQGAIGIEARVDDAHTLEFLKAINHEETYA 245 Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS-D-GKIFHEVSRNGNRCDAI 286 V ER FL L C++ I + + L V D G+ EV+ Sbjct: 246 RVTAEREFLHILKAGCQTPIGAHTFLENGVLQMKVRVFDETDPGRPPKEVTSTEPYHSPK 305 Query: 287 NIGRDAAQYIRFI 299 + + A + + Sbjct: 306 GLAAEVAALVTAL 318 >gi|291542328|emb|CBL15438.1| porphobilinogen deaminase [Ruminococcus bromii L2-63] Length = 286 Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats. Identities = 102/295 (34%), Positives = 155/295 (52%), Gaps = 14/295 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IGTR S LALA +L ++ P I + +ST GD+ ++ LT +GGKG+F Sbjct: 2 TIKIGTRKSRLALAQTEMLIKTLK--NRFPNVKIETVYISTTGDKTLDKPLTALGGKGVF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L+SGE D AVHSAKD+PTK+ GL+ISA LPR DVF++ KD Sbjct: 60 IKELEMSLLSGETDVAVHSAKDLPTKIADGLEISAVLPRGSYGDVFVTRNNFETKD---G 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK--- 181 VIGT SLRRK + + D RG ++TRL KL N + A++LA AG++RL Sbjct: 117 FVIGTGSLRRKLFAEKIYPNAKFKDIRGNVDTRLKKLLNGEYDALVLAKAGLERLDLCNG 176 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E + ++F P+P QG + IE+ N+ + +++ I+ ++T S ER L L+ Sbjct: 177 EDYTVTPFDADEFLPAPCQGIVAIESRKNS-EVSKMLAEISDKNTMLSFETERQVLHSLN 235 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C + + + + + L++D K VS + I + + I Sbjct: 236 ADCSTPVGAISKVENDRITLS---LSADCKK--TVSGTDEISNRIKLAKRLVSEI 285 >gi|329848284|ref|ZP_08263312.1| porphobilinogen deaminase [Asticcacaulis biprosthecum C19] gi|328843347|gb|EGF92916.1| porphobilinogen deaminase [Asticcacaulis biprosthecum C19] Length = 311 Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats. Identities = 102/307 (33%), Positives = 157/307 (51%), Gaps = 8/307 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIP----PHNIVIIPLSTKGDRITNRTLTEIGGK 61 +IGTR S LAL + ++ + ++T+GDRI +R L E GGK Sbjct: 4 LKIGTRGSKLALTQCGWVQRRIVAALGEDVARADEVAPLTVITTQGDRIQDRRLIEAGGK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 LFT+EIE L+ G+ID AVHS KDMP + GL + A RED RD F+S ++L DL Sbjct: 64 ALFTKEIEDALLRGDIDVAVHSLKDMPAADVPGLSLCAIPVREDPRDAFLSPNYETLADL 123 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GT+S+RR+A L R D+ VI RG ++TRL KL A+LLA AG+ RL Sbjct: 124 PQGARLGTASMRRQAQALAQRPDLQVIMTRGNVDTRLAKLQAGACDALLLAAAGLNRLGL 183 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I+ ++ + F +PGQGA+ I+ + A + ++ T+ + ER L L+ Sbjct: 184 SHHIRSHIDPDLFASAPGQGALAIQCRTEDLGAGWM-AKVHDVTTFLRIQAERGALEALE 242 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF--HEVSRNGNRCD-AINIGRDAAQYIRF 298 SC++A+ +A + L + L++DG S + A ++G I+ Sbjct: 243 ASCRTAVGAYATLENDQLALFVEALSADGSKRWQRRESLSAPTAQSARDLGLKLGHEIKT 302 Query: 299 ISNKNVF 305 + + Sbjct: 303 EAGPELI 309 >gi|67989478|ref|NP_001018179.1| hydroxymethylbilane synthase [Schizosaccharomyces pombe 972h-] gi|12644400|sp|Q09899|HEM3_SCHPO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|5834802|emb|CAB55280.1| hydroxymethylbilane synthase [Schizosaccharomyces pombe] Length = 336 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 90/315 (28%), Positives = 147/315 (46%), Gaps = 18/315 (5%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG---GKGLF 64 IGTR S LA+ + R L + P II T GD I ++ L E K L+ Sbjct: 9 IGTRKSKLAVIQSEIIREELEKHY--PHLEFPIISRDTIGDEILSKALFEFKRQLAKSLW 66 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T E+E L++ + VHS KD+P+++ G+ I+ R D + +++ DL Sbjct: 67 TRELEALLVTNQCRILVHSLKDLPSEMPDGMVIACIPKRSCPLDAIVFKAGSHYKTVADL 126 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRL 179 SV+GTSS+RR+ALL R + +D RG + TRL KL +++ ++LA AG+ RL Sbjct: 127 PPGSVVGTSSIRRRALLARNFPHLRFVDIRGNVGTRLAKLDAPDSQFDCLVLAAAGLFRL 186 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I ++L + GQGA+ +E ++ + E++K + H++T + ERA + Sbjct: 187 GLKDRIAQMLTAPFVYYAVGQGALAVEVRADDKEMIEMLKPLQHQETLYACLAERALMKR 246 Query: 240 LDGSCKSAIA----GFAYCKGS-TLYFYGIVLASDGKIFH---EVSRNGNRCDAINIGRD 291 L G C I A S + G VL++DG + + +A +G Sbjct: 247 LQGGCAIPIGVQTDVLAISNSSYRISLLGTVLSADGLRAAFGNAEAVVSSEEEAEELGIT 306 Query: 292 AAQYIRFISNKNVFN 306 A + + Sbjct: 307 VALALLKNGAGPILE 321 >gi|225569053|ref|ZP_03778078.1| hypothetical protein CLOHYLEM_05132 [Clostridium hylemonae DSM 15053] gi|225161852|gb|EEG74471.1| hypothetical protein CLOHYLEM_05132 [Clostridium hylemonae DSM 15053] Length = 298 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 95/296 (32%), Positives = 146/296 (49%), Gaps = 7/296 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIG+R S LA+ A + ++ P I+ + T+GD+I +R L GGKG Sbjct: 2 QSIIRIGSRESRLAVKQAEIVKQAVER--NCPDIKAEIVTMKTEGDKILDRRLELAGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+EK L+ G ID VHS KD+P ++ + L + A+ RED RDV I ++ + Sbjct: 60 LFVKELEKALLDGRIDICVHSLKDVPMEVPEDLPVVAFGEREDPRDVLIYKPGRT--SIP 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 VIGTSS RR+ L R + RG ++TRL KL+ +LA AG+KRL E Sbjct: 118 EGGVIGTSSRRRELQLKRLYPSCTFRSIRGNVQTRLRKLSEEGFDGTVLAAAGLKRLHME 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +V + ++++ P+ GQG + ++ + + ER F A L G Sbjct: 178 EVAGRVFSVDEIIPAVGQGILAVQGRKGRDY--SWLTSFACGKSRAEAEAEREFAAALGG 235 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C S +A A +G+ L G+ G I+ +R G A +G A+ +R Sbjct: 236 GCTSPVAAHAQAQGAELKLTGLYYCG-GDIYRTRTRTGETDRARQLGAALAEEMRR 290 >gi|222529189|ref|YP_002573071.1| porphobilinogen deaminase [Caldicellulosiruptor bescii DSM 6725] gi|222456036|gb|ACM60298.1| porphobilinogen deaminase [Caldicellulosiruptor bescii DSM 6725] Length = 290 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 97/295 (32%), Positives = 148/295 (50%), Gaps = 6/295 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIG R S L+ + +P+ TKGD ++L + G+ Sbjct: 2 KKLRIGARDSKLSRIQVDIVARKIKQTL---GIECEFVPIKTKGDIDKTKSLKDFQSPGV 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L+S EID AVHS KD+P ++ I A + RED RDV +S L Sbjct: 59 FVKEIELALLSREIDLAVHSLKDLPCEMDSNFDIVAVVEREDPRDVLVSKDGVGFYQLKP 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++ IGTSSLRR+ L R DI V++ RG IETRL+K+ + ++LAYA +KRL + Sbjct: 119 NAKIGTSSLRREVHLKNLREDIQVVNIRGNIETRLSKIESEGLDGVVLAYAALKRLNLDS 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + + +I + P PGQGAICIE ++P + ++ IN + + ER L L G Sbjct: 179 HVSYVFDINEITPCPGQGAICIECLEDSPY-KSILSKINDVNAYIQTQFERLVLKLLGGG 237 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C S+I F +Y + +L D + S G++ D +++ + ++ Sbjct: 238 CHSSIGVFCKTDQDKIYAFASLLRGD--KLVKASIEGDKADFLSLANKLSNMLKS 290 >gi|261417417|ref|YP_003251100.1| porphobilinogen deaminase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373873|gb|ACX76618.1| porphobilinogen deaminase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 351 Score = 275 bits (705), Expect = 5e-72, Method: Composition-based stats. Identities = 95/352 (26%), Positives = 152/352 (43%), Gaps = 55/352 (15%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPP-----------HNIVIIPLSTKGDR 49 M RI TR S LALA +++ + + ++ ++T+GDR Sbjct: 1 MSDLKLRIATRKSALALAQTTMAADAIVAANSVIGNAADSNNARDSLTYELVSMTTEGDR 60 Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109 +++L GGKG+F +E+E L+ G D A+HS KDMP ++L +++A L RED RD Sbjct: 61 RLDKSLASFGGKGVFIKELEIALLEGRADIAIHSLKDMPAEVLPQFKLAAVLKREDPRDA 120 Query: 110 FISHTAQ---SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA 166 F+S DL + +GT S+RR L R D+ + RG I+TR+ KL + Sbjct: 121 FLSRGGSAGIRFMDLPAGARVGTGSIRRVVQLKALRPDLEYVPIRGNIQTRIGKLA--EL 178 Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVN----------NPKAQE 216 ++LA AG+KR+ + E + E P+ GQG + IET + + Sbjct: 179 DGVVLAAAGLKRMGLADQVTEYFSTEQMLPASGQGILAIETLNDATVQESRVTGRADLAQ 238 Query: 217 LVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY--CKGS----------------- 257 ++ +N T+ + E A+L L+ C+ +A FA C+ Sbjct: 239 ILARVNDVATYCIASAEMAYLKALNAGCQFPVASFAEFVCEDGIENRGTCGALEENANRI 298 Query: 258 --TLYFYGIVLASDGKIFHEVSRNGNRC--------DAINIGRDAAQYIRFI 299 TL GI + GN + N+G + A I+ Sbjct: 299 AQTLKIRGIYWDEKSEKLLRAEVAGNVDLNSEDCVQQSKNLGIELACAIQKQ 350 >gi|205374358|ref|ZP_03227156.1| porphobilinogen deaminase [Bacillus coahuilensis m4-4] Length = 252 Score = 275 bits (705), Expect = 5e-72, Method: Composition-based stats. Identities = 97/245 (39%), Positives = 140/245 (57%), Gaps = 3/245 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL L + + + TKGD I + TL+++GGKGL Sbjct: 2 RKIVVGSRRSTLALTQTNWVIEQLKQLGG--NFTFEVKEIVTKGDVILDVTLSKVGGKGL 59 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ ++ EID AVHS KDMP++L GL + PRED RD IS LKDL Sbjct: 60 FVKEIEQAMMDKEIDMAVHSMKDMPSELPSGLTLGCVPPREDRRDALISKNHVKLKDLPK 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-E 182 +VIGTSSLRR A LL R D+ + RG I+TRL KL+ + AI+LA AG+ R+ + Sbjct: 120 GAVIGTSSLRRGAQLLAVRPDLDIKWIRGNIDTRLAKLDGEEYDAIILAAAGLARMGWAK 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V+ E L+ + P+ GQGA+ IE ++ + +L+ N ++T + ER FL +++G Sbjct: 180 DVVTEFLSEDICVPAIGQGALGIECREDDEELLDLLSKFNDKETERTTKAERTFLHKMEG 239 Query: 243 SCKSA 247 S Sbjct: 240 GVPSP 244 >gi|312622563|ref|YP_004024176.1| porphobilinogen deaminase [Caldicellulosiruptor kronotskyensis 2002] gi|312203030|gb|ADQ46357.1| porphobilinogen deaminase [Caldicellulosiruptor kronotskyensis 2002] Length = 290 Score = 275 bits (705), Expect = 5e-72, Method: Composition-based stats. Identities = 98/295 (33%), Positives = 147/295 (49%), Gaps = 6/295 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIG R S L+ + +P+ TKGD ++L + G+ Sbjct: 2 KKLRIGARDSKLSRIQVDIVARKIKQTL---GIECEFVPIKTKGDIDKTKSLKDFKSPGV 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L S EID AVHS KD+P ++ I A + RED RDV +S L Sbjct: 59 FVKEIELALFSREIDLAVHSLKDLPCEMDSNFDIVAVVEREDSRDVLVSKDGVGFYQLKP 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++ IGTSSLRR+ L R DI V++ RG IETRL+K+ + ++LAYA +KRL + Sbjct: 119 NAKIGTSSLRREVHLKNLREDIQVVNIRGNIETRLSKIESEGLDGVVLAYAALKRLNLDS 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + I ++ + P PGQGAICIE ++P + ++ IN D + ER L L G Sbjct: 179 RVSYIFDVNEITPCPGQGAICIECLKDSPY-KNILNKINDTDAYIQTQFERLVLKFLGGG 237 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C S+I F +Y + +L D + S G++ D +++ + ++ Sbjct: 238 CHSSIGVFCKTDQDKIYAFASLLRGD--KLVKASIEGDKADFLSLANKLSNMLKS 290 >gi|196004682|ref|XP_002112208.1| hypothetical protein TRIADDRAFT_56012 [Trichoplax adhaerens] gi|190586107|gb|EDV26175.1| hypothetical protein TRIADDRAFT_56012 [Trichoplax adhaerens] Length = 314 Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats. Identities = 96/335 (28%), Positives = 141/335 (42%), Gaps = 66/335 (19%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 ME+ RIGTR S LA+ +L ++H P I I+ + T GDR+ ++ L EIG Sbjct: 4 MEETVVRIGTRKSQLAMIQTHSVVDALREIH--PKARIEIVTMDTIGDRVLDKALPEIGQ 61 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 LFT+++E L +ID +HS KD+P+ L +GL I+A Sbjct: 62 TNLFTKDLEVALTDNKIDLIIHSLKDVPSTLPEGLAIAAI-------------------- 101 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 +VIGTSSLRR A L R + + RG + TRL KL+ A++LA AG++ Sbjct: 102 ---GNVIGTSSLRRIAQLKRRFPHLKFENVRGNLNTRLKKLDESGIYDALVLAGAGVE-- 156 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 L ++ + GQGA+ IE N+ K L+ D+ ERAFL Sbjct: 157 ---------LTPDECLYAIGQGALGIEIRKNDKKTFSLISAYTDFDSLVCNAAERAFLRF 207 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFH----EVSRNG--------------- 280 LD C I + + L G V + DG E + +G Sbjct: 208 LDKGCSVPIGVYTEFTENKLKITGAVFSLDGSKRVQYSDECTISGLNAKDDCESNYESLS 267 Query: 281 ----------NRCDAINIGRDAAQYIRFISNKNVF 305 + +A +G+ A+ I V Sbjct: 268 SILCPSEMCNSLIEAERLGKYVAEMILKNHGGEVL 302 >gi|325102976|ref|YP_004272630.1| porphobilinogen deaminase [Pedobacter saltans DSM 12145] gi|324971824|gb|ADY50808.1| porphobilinogen deaminase [Pedobacter saltans DSM 12145] Length = 532 Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats. Identities = 85/262 (32%), Positives = 137/262 (52%), Gaps = 12/262 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + F+IGTR S LAL A S L + + I + T+GD I N L ++ GKG Sbjct: 3 RIFKIGTRGSDLALWQANHVASKLNEA----GYQTEIKIIKTQGDNILNLRLDKLEGKGF 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ----SLK 119 FT+E+E+ L++G+ID AVHS KD+PT+ GL ISA RED +V + Sbjct: 59 FTKELEEHLLAGDIDLAVHSHKDLPTENPPGLFISAVSEREDPSEVLLILKDCVDTSKKL 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 + + ++GTSS RR++ + R D+ D RG + TR+ KL + AI+LA AG+ RL Sbjct: 119 SVKHNGLVGTSSNRRQSQISSVRPDLEFEDLRGNVNTRIQKLRDENYDAIVLAKAGVSRL 178 Query: 180 KKEKVIKEILNIE---DFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERA 235 + I IE + P+P QG + ++ + + ++K VI++++ + ++ ER Sbjct: 179 NLDLSEFYIETIEPVAEMIPAPAQGVLAVQIREGDSELDAVLKEVIHNQEVANCISVERK 238 Query: 236 FLAELDGSCKSAIAGFAYCKGS 257 L +G C + + + Sbjct: 239 VLNLFNGGCHMPLGSYCKKEDD 260 >gi|312793378|ref|YP_004026301.1| porphobilinogen deaminase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180518|gb|ADQ40688.1| porphobilinogen deaminase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 290 Score = 275 bits (703), Expect = 8e-72, Method: Composition-based stats. Identities = 104/293 (35%), Positives = 151/293 (51%), Gaps = 6/293 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIG R S L+ + +P+ TKGD ++L E G+ Sbjct: 2 KKLRIGARDSRLSRIQVDIVARKIKQTL---GIECEFVPIKTKGDIDKTKSLKEFKSPGV 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE L+S EID AVHS KD+P ++ +I A + RED RDV +S L Sbjct: 59 FVKEIELALLSREIDLAVHSLKDLPCEMDSNFEIVAVVEREDPRDVLVSKDGLGFYQLKS 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++ IGTSSLRR+ L R DI VI+ RG IETRL+K+ + I+LAYA +KRLK + Sbjct: 119 NAKIGTSSLRREVHLKNLREDIQVINIRGNIETRLSKIQSEGLDGIVLAYAALKRLKLDS 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + I +I + P PGQGAICIE ++P + ++ IN D + ER L L G Sbjct: 179 YVSYIFDINEITPCPGQGAICIECLKDSPY-KSILSKINDADAYIQTQFERLVLKFLGGG 237 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C S+I F + +Y + +L D + S GN+ D +++ ++ + Sbjct: 238 CHSSIGVFCKTDQNKIYAFASLLRGD--KLVKASIEGNKDDFLSLANKLSKML 288 >gi|170783140|ref|YP_001711474.1| porphobilinogen deaminase [Clavibacter michiganensis subsp. sepedonicus] gi|169157710|emb|CAQ02912.1| porphobilinogen deaminase [Clavibacter michiganensis subsp. sepedonicus] Length = 328 Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 91/313 (29%), Positives = 152/313 (48%), Gaps = 17/313 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LALA + + + ++P++T GD + +L+ +GG G+F Sbjct: 13 TLRIGTRGSALALAQTRAIAAEITGAS---GLEVELVPVTTHGDT-SRESLSSLGGTGVF 68 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L+ GE D VHS KD+PT GL +++ RED RDV + +L L Sbjct: 69 ASALRESLLRGECDLVVHSLKDLPTAPYAGLTVASVPVREDPRDVLCARDGLTLATLPRG 128 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT S RR+A +L R D+ V+D RG I+TRL+++ A++LA AG++R+ + Sbjct: 129 ARVGTGSPRRRAQILAERPDLDVVDIRGNIDTRLSRVTAGDLDAVVLAAAGLERIDRIGA 188 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQ----ELVKVINHEDTWDSVNCERAFLAEL 240 E L ++ +P +PGQGA+ +E + + V+ ++ T +V ER LA L Sbjct: 189 ATEHLELDRWPTAPGQGALALEIRTEDAETHSVVGRAVEAVDDPFTHAAVLAERGVLAAL 248 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDA------ 292 + C + I +A + L +V DG S + D +G A Sbjct: 249 EAGCAAPIGAWATVTSARLALTAVVYRPDGTQRMAASHELDTAGLDLAQLGASASALSGP 308 Query: 293 -AQYIRFISNKNV 304 ++ + ++ Sbjct: 309 VSRELLDAGAADL 321 >gi|281348599|gb|EFB24183.1| hypothetical protein PANDA_019874 [Ailuropoda melanoleuca] Length = 298 Score = 274 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 132/290 (45%), Gaps = 39/290 (13%) Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-- 114 +IG K LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H Sbjct: 1 QIGEKSLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKF 60 Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLA 172 ++L+ L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA Sbjct: 61 VGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILA 120 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 AG++R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T Sbjct: 121 AAGLQRMGWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIA 180 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGST------LYFYGIVLASDGKIFHEVSR-------- 278 ERAFL L+G C +A K LY G V + DG + + Sbjct: 181 ERAFLRHLEGGCSVPVAVHTAMKDGQASRGRWLYLTGGVWSLDGSDSMQETMQATIRVTA 240 Query: 279 ---NGNRCD------------------AINIGRDAAQYIRFISNKNVFNF 307 +G D A N+G A + KN+ + Sbjct: 241 QLEDGPEDDPQLVGITARNIPREAQLAAENLGISLASLLLNKGAKNILDV 290 >gi|209886240|ref|YP_002290097.1| porphobilinogen deaminase [Oligotropha carboxidovorans OM5] gi|209874436|gb|ACI94232.1| porphobilinogen deaminase [Oligotropha carboxidovorans OM5] Length = 338 Score = 274 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 94/322 (29%), Positives = 145/322 (45%), Gaps = 20/322 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K RIGTR S +ALA E L P ++ I+ T GD+ L ++GGK Sbjct: 10 TDKAMRIGTRKSVMALAQTSEIARQLTAA--DPALDVEIVKFETTGDQDQTGKLLDLGGK 67 Query: 62 G-LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G F +I + G ++ A+HS KDMP + GL I A L R+ D + +L Sbjct: 68 GGAFVAQIRDAVREGRLEAAMHSLKDMPGNEDTPGLVIGATLTRDPPTDALVVRHGVTLA 127 Query: 120 DL----ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK---------- 165 DL IGT+++RR A + R + +I FRG +TR+ KL+N + Sbjct: 128 DLRRTGGKGFKIGTNAVRRAAYVRRLFPECEIIHFRGAADTRIRKLDNGEKQRLPEGGEV 187 Query: 166 --AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223 A A+++A AG++R+ I + ++ P+ GQG + +E ++ + I+ Sbjct: 188 GPADALVMAQAGLERVGCADRIAHCFSPDEILPAVGQGIVAVECAASDWCTLARLAQIDD 247 Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283 + ER L L+G C S IAG+A +G + VL F EV+R G Sbjct: 248 PVSRCCAAAEREVLWVLNGHCNSPIAGYAIVEGDDVLLKAAVLDEANDHFIEVTRRGPAS 307 Query: 284 DAINIGRDAAQYIRFISNKNVF 305 +GR A + +V Sbjct: 308 RPRELGRAVAFELLAKGAADVI 329 >gi|316935323|ref|YP_004110305.1| porphobilinogen deaminase [Rhodopseudomonas palustris DX-1] gi|315603037|gb|ADU45572.1| porphobilinogen deaminase [Rhodopseudomonas palustris DX-1] Length = 326 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 97/320 (30%), Positives = 146/320 (45%), Gaps = 20/320 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-L 63 P RIGTR S +ALA + L + II T GD L GGKG Sbjct: 4 PVRIGTRKSVMALAQTEDIAKQLSAAAS--ELDPQIIKFETVGDSDQISKLLPHGGKGGA 61 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPT-KLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 F EI ++ GE+ CA+HS KDMP + GL ++A L R+ D + +L+DL Sbjct: 62 FVAEIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPACDSLVLRKGLTLEDLK 121 Query: 123 L----HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK------------A 166 IGT+++RR A R ++ VI FRG ++R+ KL+N + A Sbjct: 122 KSRGKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADSRMRKLDNGEKQRMPDGSEVGPA 181 Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226 A+++A AGI+R+ I E+ P+ GQG + +E V+ K ++ + +I++ + Sbjct: 182 DALIMARAGIERVGFVDRIAHDFTPEEMLPAAGQGIVAVECPVHEWKTRQYLALIDNHQS 241 Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286 + ER L L+G C S IA + G + VL +G +F E R G Sbjct: 242 RLCCDAEREVLWVLNGHCNSPIAAHSIITGDEMTLRASVLDLEGGMFIEAVRTGPANRPR 301 Query: 287 NIGRDAAQYIRFISNKNVFN 306 +GRD + V Sbjct: 302 ELGRDVGLELLDKGAAAVIE 321 >gi|300741887|ref|ZP_07071908.1| hydroxymethylbilane synthase [Rothia dentocariosa M567] gi|300381072|gb|EFJ77634.1| hydroxymethylbilane synthase [Rothia dentocariosa M567] Length = 371 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 97/363 (26%), Positives = 152/363 (41%), Gaps = 64/363 (17%) Query: 5 PFRIGTRCSPLALAH----AFETRSSL----MDVHKIPPHNIVIIPLSTKGDRITNRTLT 56 P+ +GTR S LAL A + + I + T GD + L Sbjct: 4 PYILGTRGSALALTQSTLAAEHIVQVFNAHSREHGAERTLSFDITTVKTDGD-VLTGPLA 62 Query: 57 EIGGKGLFTEEIEKKLISGE----IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS 112 +GG G+F + ++L+ G+ +D AVHS KD+P + GL I+A L RED RD ++ Sbjct: 63 TLGGTGVFAAALRQRLLDGDTPGGVDVAVHSLKDLPAEPCPGLVIAAILEREDPRDALVA 122 Query: 113 HTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------- 161 +L L + +GT S RR A + R D+ ++D RG + TR+ ++ Sbjct: 123 RDNLTLDTLPTGARVGTGSPRRAAQVRALRPDLEIVDIRGNVGTRIARVKGLEEHGNRQV 182 Query: 162 -------------------NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGA 202 N A++LA +G+KRL KE VI E L+ P+PGQGA Sbjct: 183 VVRDSTETDEAAHRGIGTENTGDCDAVILAVSGLKRLGKESVITEYLDPSRMLPAPGQGA 242 Query: 203 ICIETHVN-----------NPKAQELVKVI-------NHEDTWDSVNCERAFLAELDGSC 244 + IE +P+ + V+ + +H +T V ER L L+ C Sbjct: 243 LAIEVRETEFVNPDTATLFDPEISQPVRTLGEALIAADHFETHLEVTAERRLLRRLEAGC 302 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHE-VSRNG--NRCDAINIGRDAAQYIRFISN 301 + I +A K L +V + DG S G + A +G A+ + + Sbjct: 303 AAPIGAYATVKDGDLVLTAVVASPDGTESLRHTSATGELDVPGAERLGIRVAEDLLQMGA 362 Query: 302 KNV 304 + Sbjct: 363 AAL 365 >gi|32490989|ref|NP_871243.1| hypothetical protein WGLp240 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166195|dbj|BAC24386.1| hemC [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 291 Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 84/277 (30%), Positives = 143/277 (51%), Gaps = 1/277 (0%) Query: 30 VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPT 89 +H P NI ++P+ T GD I KGLF +E+EK L+ + D AVHS KD + Sbjct: 11 LHYHPKLNIKLVPILTTGDLINKIRNNITNEKGLFIKELEKSLLKYQSDIAVHSMKDFSS 70 Query: 90 KLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVID 149 L L ++A R+D RD +S+ ++ L ++ +GTSSLRRK LL R D+ + Sbjct: 71 SFLDSLGLAAICKRDDPRDAIVSNYYNNIISLPNNAKVGTSSLRRKCQLLSIRPDLKIFP 130 Query: 150 FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209 +G I +RL KLN A++LA A +KRLK + + ++ P+ GQG+I I+ + Sbjct: 131 CKGNIHSRLKKLNQGVFDALILATAALKRLKINEQMYTPIDPSYLLPAMGQGSIAIQCRL 190 Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG-STLYFYGIVLAS 268 + K ++V+ IN++ T +N E+ ++ L C+ I +A + +T++ +V + Sbjct: 191 YDNKIIDIVRNINNKKTALCINSEKIVVSMLGTGCRVPIGSYAKIENKNTIWIRALVGSI 250 Query: 269 DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 DG +A + + + + + KN+ Sbjct: 251 DGSNIIRSEGKSCVSNAEKLSKKQVKNLINLGAKNIL 287 >gi|156937477|ref|YP_001435273.1| porphobilinogen deaminase [Ignicoccus hospitalis KIN4/I] gi|166217774|sp|A8AAB4|HEM3_IGNH4 RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|156566461|gb|ABU81866.1| hydroxymethylbilane synthase [Ignicoccus hospitalis KIN4/I] Length = 304 Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 106/299 (35%), Positives = 152/299 (50%), Gaps = 11/299 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT---LTEIGGK 61 +I R S L+L S L + P +I + T GD+ N L + G Sbjct: 2 KIKIAARGSKLSLKQVSMFTSYL--LKFFPDLEYEVITVKTTGDK-ANAPFEELAKRGLT 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKD 120 GLF +E+ K ++ G+ D AVHS KD+PT+L L+I+A+LPR+ DV IS + D Sbjct: 59 GLFEKEVNKAVLEGKADVAVHSLKDLPTELDPRLEIAAFLPRDPPYDVLISRAGNYDIFD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSS RRKAL+ R D+ V D RG ++TRL KL + AI+LA AG+ RL Sbjct: 119 LPKGSVVGTSSARRKALIKNLRPDLVVKDLRGNVDTRLEKLRRGEYDAIVLAEAGVSRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V L+ FPPSPGQG I T + + +L+K I+ + ER L E Sbjct: 179 L-NVDYVRLDWRLFPPSPGQGIIVAVTRKGS-EISDLLKSISDVKSEKLATAERTVLKEF 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G C A+ A+ +GS + VL+ G+ +V G +G AA+ ++ + Sbjct: 237 GGGCFVALGAIAFEEGSLIRLRATVLSPSGRERVDVELIGKG--PEEVGMRAAERLKAL 293 >gi|225684419|gb|EEH22703.1| porphobilinogen deaminase [Paracoccidioides brasiliensis Pb03] Length = 347 Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 95/314 (30%), Positives = 143/314 (45%), Gaps = 19/314 (6%) Query: 11 RCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEK 70 R S LAL RSSL P + + T GD L E K L+TEE+E+ Sbjct: 26 RKSKLALLQTDLIRSSLKAA--WPEYEFRVHSQDTAGDLNKVTPLREFTTKNLWTEELEE 83 Query: 71 KLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLKDLALHSVI 127 L++ +ID VHS KD+PT+L K + A +PRED RDV + +L +L SV+ Sbjct: 84 LLVAKKIDFVVHSLKDVPTQLPKPCALGAVVPREDPRDVLVIKKGLPKMTLAELPAGSVV 143 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVI 185 GTSS+RR A L R + D RG IETRL KL+ + I+LA AG+ R + I Sbjct: 144 GTSSVRRIAQLSRHYPHLKPQDIRGNIETRLAKLDAEDGPFTCIILAAAGLLRTGQGARI 203 Query: 186 KEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 L+ ++ + GQGA+ +E ++ + + +++ I + ER+ L L+G Sbjct: 204 SHFLDSKNGKMLHAVGQGALGVEIRADDERMRAMIEKIGDRRATFACLAERSLLRTLEGG 263 Query: 244 CKSAIAGFAYCKGST-------LYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAA 293 C + + L IV + DGK EV + +A G+ A Sbjct: 264 CSAPLGVETEWVKGEGQGEVEKLRLRAIVASVDGKEAVEVEMEAEIRSEAEAEGFGKTVA 323 Query: 294 QYIRFISNKNVFNF 307 + + + Sbjct: 324 EELIVKGAGKILEV 337 >gi|170096450|ref|XP_001879445.1| predicted protein [Laccaria bicolor S238N-H82] gi|164645813|gb|EDR10060.1| predicted protein [Laccaria bicolor S238N-H82] Length = 340 Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 96/314 (30%), Positives = 146/314 (46%), Gaps = 12/314 (3%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+K IG R S LA A RS L + P I I +TE GG Sbjct: 15 EQKAIVIGCRPSTLAKIQAELVRSRLKVL--FPASRFEISSKKFPQPEIGTSQITERGGA 72 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118 L+T E+E L G+ID VHS KD+PTKL +G +I L RED RD + ++L Sbjct: 73 SLWTTELEDALFDGDIDILVHSLKDVPTKLKEGCEIIHVLEREDRRDCLVVKDGLPYRTL 132 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGI 176 ++L SV+GT S+RR A + R + + D RG I+TRL KL++ A++LA AG+ Sbjct: 133 EELPAGSVVGTGSVRRVAQMKRRYPLLVIKDVRGNIDTRLQKLDSPDLPYTALILASAGL 192 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 RL I L+ P+ GQG + E + K + +V + +V ERA Sbjct: 193 LRLSLHDRITSYLSPPISYPAVGQGCLGAEFRSADTKVKAMVSRLEVWQDGWAVRAERAL 252 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGI--VLASDGKIFHEVSRNG---NRCDAINIGRD 291 L L+G C + ++ G + + + + DG V G + + + +G+ Sbjct: 253 LWVLEGGCAFPVGIWSSWSGDNIASESLSVMTSPDGSEEITVETTGVVASVEEVLELGKQ 312 Query: 292 AAQYIRFISNKNVF 305 AA+ + + + Sbjct: 313 AARSLLEKGGRGII 326 >gi|296282337|ref|ZP_06860335.1| porphobilinogen deaminase [Citromicrobium bathyomarinum JL354] Length = 292 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 146/288 (50%), Gaps = 4/288 (1%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 +A A ETR+ L H + ++P+ GD++ +R L ++GGK L+T E++ L G Sbjct: 1 MAQAHETRARLCAAHGWDESAVELVPVVAGGDKVQDRPLADVGGKALWTRELDAWLDEGR 60 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 ID AVHS KD+ T + + ++A LPR D RDV + A SL+ + + +GTS+ RR A Sbjct: 61 IDAAVHSLKDVETIRPEWITLAAILPRADRRDVLLG--ASSLRSIPQGATLGTSAPRRAA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 + R DI + FRG + TR+ KL +A LLA AG++RL +E V L +E + P Sbjct: 119 QMKNLRPDIETVLFRGNVATRMAKLQAGEADVTLLAAAGLERLGQESVGT-PLPLETWLP 177 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 +P QGAI IE + + + +N T V ERA L L GSC S + Sbjct: 178 APSQGAIGIECRTEDSVTRGHLDALNDAPTRREVEAERALLEALGGSCHSPVGVLVENAD 237 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 L+ + ++DG + S + D I R A + + + Sbjct: 238 EGLHMRAALFSADGAERVDGSSDLTPGDDEAI-RAFAADLLARATPGI 284 >gi|126640355|ref|YP_001083339.1| porphobilinogen deaminase [Acinetobacter baumannii ATCC 17978] Length = 226 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 73/222 (32%), Positives = 121/222 (54%) Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS 143 KD+P L +GL ++ RED D F+S+ + DL + +GTSSLRRK+ +L+ R Sbjct: 1 MKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQGAKVGTSSLRRKSQILKQRP 60 Query: 144 DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAI 203 D+ +ID RG + TRL KL++ + AI+LA AG+KRL + I+ + P+ GQGA+ Sbjct: 61 DLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAERIRHCIEPSVSLPAVGQGAL 120 Query: 204 CIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYG 263 +E ++ + L++ + H +T V ERAF A L+G C+ IAG+A + ++ G Sbjct: 121 GLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGGCQVPIAGYATLQDGKIHIEG 180 Query: 264 IVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 V + DG+ +A +G + A+ + ++ Sbjct: 181 RVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAGDLL 222 >gi|119713318|gb|ABL97382.1| porphobilinogen deaminase [uncultured marine bacterium EB80_02D08] Length = 300 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 97/301 (32%), Positives = 143/301 (47%), Gaps = 4/301 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +I TR S LA+ A + + K + +IP++++GD+ TN+ L EIGGKGLF Sbjct: 2 KIKIATRQSELAMYQANFVANEIKKSIK--DVEVELIPMTSEGDQ-TNKPLHEIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E L S ++D AVHS KD+P +L +I RE D+ +S +S D + Sbjct: 59 ISTLESALESNKVDIAVHSLKDVPARLDPKFKIINVFKRESPSDLLLSKDGKSFSDFLEN 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGTS RRKA + R DI I RG I TR+NKLN +++A A I RL ++ Sbjct: 119 ATIGTSGPRRKAQINYLRPDIKTIPVRGNIATRINKLNEGYFDGLVVAKAAINRLGLQQN 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E +I++ P+ QG I E +N + E ++ I N ER+F+A +DG C Sbjct: 179 SYE-FSIDEMLPAASQGHIATECLSSNKEIIETLESIGDSKELILANAERSFVASMDGGC 237 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 S IA + G VL+ G N + D A K++ Sbjct: 238 LSPIAILCQNFNDEIKVIGKVLSYKGDKLIYKKMNSSFKDIDKDIISFADEFILEGAKSL 297 Query: 305 F 305 Sbjct: 298 I 298 >gi|50841792|ref|YP_055019.1| porphobilinogen deaminase [Propionibacterium acnes KPA171202] gi|289424694|ref|ZP_06426477.1| hydroxymethylbilane synthase [Propionibacterium acnes SK187] gi|289428901|ref|ZP_06430581.1| hydroxymethylbilane synthase [Propionibacterium acnes J165] gi|295129869|ref|YP_003580532.1| hydroxymethylbilane synthase [Propionibacterium acnes SK137] gi|50839394|gb|AAT82061.1| porphobilinogen deaminase, HemC [Propionibacterium acnes KPA171202] gi|289155391|gb|EFD04073.1| hydroxymethylbilane synthase [Propionibacterium acnes SK187] gi|289157902|gb|EFD06125.1| hydroxymethylbilane synthase [Propionibacterium acnes J165] gi|291376805|gb|ADE00660.1| hydroxymethylbilane synthase [Propionibacterium acnes SK137] Length = 366 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 91/329 (27%), Positives = 141/329 (42%), Gaps = 32/329 (9%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L ++ + ++T GD + +L +GG G+F Sbjct: 36 IRLGTRASTLATTQSEMVAGLLRS----EGLDVNLTTITTHGDT-STASLAAMGGIGVFA 90 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 I L+ GE D AVHS KD+PT GL I A R D RD ++ +L DL + Sbjct: 91 SAIRAALLEGEADIAVHSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDLPQEA 150 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------NKAHAILLAYAG 175 +GT S RR A LL R D++++D RG ++TRL ++ A++LA +G Sbjct: 151 SVGTGSPRRAAQLLAVRPDLTIVDIRGNVDTRLGRVKGLGRYAKNGGKEDLDAVVLAASG 210 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK---AQELVKVINHEDTWDSVNC 232 + RL + E L+ P+P QGA+ +E + + + + I+ T + Sbjct: 211 LARLGHSGAVTEFLDPSVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTRLAATA 270 Query: 233 ERAFLAELDGSCKSAIAGFAYCKG------STLYFYGIVLASDGKIFHE--------VSR 278 ERA L+ L+ C + I A K L +V A DG Sbjct: 271 ERAVLSHLEAGCAAPIGALAQLKPVSGKSLQVLTLDVVVAAVDGSRTVREQVSVELPAEV 330 Query: 279 NGNRCDAINIGRDAAQYIRFISNKNVFNF 307 A +G AA+ + +V + Sbjct: 331 EPALAAAHTLGVTAAEELLDDGAADVADL 359 >gi|144479|gb|AAA23113.1| porphobilinogen deaminase [Prosthecochloris vibrioformis] Length = 279 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 94/276 (34%), Positives = 140/276 (50%), Gaps = 12/276 (4%) Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPT----KLL 92 NI + + T GD + + L++IG GLFT++IEK L++GEID AVHS KD+PT L Sbjct: 2 NISLKLVKTTGDVLLDSPLSKIGDMGLFTKDIEKHLLAGEIDLAVHSLKDVPTVRRKAWL 61 Query: 93 KGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRG 152 S PR R F + + + + TSSLRR + LL R D+ ++D RG Sbjct: 62 SPRSPSVKTPR---RHHFQVRQG--VDGPSAEAKMATSSLRRMSQLLSLRPDLEIMDIRG 116 Query: 153 KIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNP 212 + TR K + A++LAYAG+ RL+ I EIL E P+ GQGA+ IET ++ Sbjct: 117 NLNTRFKKFDEGDFDAMMLAYAGVYRLEFSDRITEILPHETMLPAVGQGALGIETRTDDA 176 Query: 213 KAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272 + +E+V+V+N ++T ERA L L G C+ I F TL V + DGK Sbjct: 177 ETREIVRVLNDDNTEMCCRAERALLRHLQGGCQIPIGSFGSYIDGTLKLLAFVGSVDGKT 236 Query: 273 FHEVSRN---GNRCDAINIGRDAAQYIRFISNKNVF 305 +A +G + A+ + + + + Sbjct: 237 GLRNEVTKAVKTPEEAEAVGIELAEILLSMGAEKIL 272 >gi|39934577|ref|NP_946853.1| porphobilinogen deaminase [Rhodopseudomonas palustris CGA009] gi|39648426|emb|CAE26947.1| putative porphobilinogen deaminase [Rhodopseudomonas palustris CGA009] Length = 327 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 97/324 (29%), Positives = 147/324 (45%), Gaps = 20/324 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K P RIGTR S +ALA + L + II T GD L GG Sbjct: 1 MVKFPVRIGTRKSVMALAQTEDIAKQLSAAAS--ELDPQIIKFETVGDSDQISKLLPHGG 58 Query: 61 KG-LFTEEIEKKLISGEIDCAVHSAKDMPT-KLLKGLQISAYLPREDIRDVFISHTAQSL 118 KG F EI ++ GE+ CA+HS KDMP + GL ++A L R+ D + +L Sbjct: 59 KGGAFVAEIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPACDSLVLRKGLTL 118 Query: 119 KDLAL----HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------- 163 ++L IGT+++RR A R ++ VI FRG ++R+ KL+N Sbjct: 119 EELKKSRGKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADSRMRKLDNREKQRMPDGSE 178 Query: 164 -NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 A A+++A AGI+R+ I E+ P+ GQG + +E V+ K ++ + +I+ Sbjct: 179 VGPADALIMARAGIERVGFVDRIAHDFTPEEMLPAAGQGIVAVECPVHEWKTRQYLALID 238 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 + + + ER L L+G C S IA + G + VL +G +F E +R G Sbjct: 239 NHQSRLCCDAEREVLWVLNGHCNSPIAAHSVITGDEMTLRASVLDLEGGMFIEAARTGPA 298 Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306 +GR + V Sbjct: 299 NRPRELGRTVGLELLDKGAAAVIE 322 >gi|15678894|ref|NP_276011.1| porphobilinogen deaminase [Methanothermobacter thermautotrophicus str. Delta H] gi|11386772|sp|O26960|HEM3_METTH RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|2621967|gb|AAB85372.1| porphobilinogen deaminase [Methanothermobacter thermautotrophicus str. Delta H] Length = 289 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 151/288 (52%), Gaps = 6/288 (2%) Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 GTR S LAL L +V K +I KGDRI + L + +GLFT E+ Sbjct: 4 GTRGSRLALVQTNHVIEMLSEVCKEKIEKKIIKT---KGDRIRDSQLYSMDSRGLFTREL 60 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128 + +++ E+D AVHS KD+P+ L L I+A PRE +V +S +DL S +G Sbjct: 61 DMAVLNEEVDLAVHSLKDVPSDLDPDLAIAAVPPRESPAEVLVSR--LDWEDLPQGSKLG 118 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188 TSSLRR+A + + + RG I+TR+ K+ + + HA ++A AG+KRL E+ IK Sbjct: 119 TSSLRREAFCNHHQKNFKMEPLRGNIDTRIRKVMDGEVHATIMAEAGLKRLGLEEHIKRR 178 Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248 +E F P+ GQGA+ + T + + + I H + V E+ L EL C+ + Sbjct: 179 FPVEYFTPAAGQGALAVITRA-DSELISSIGRITHHPSLQEVTAEKTLLRELGAGCQCPL 237 Query: 249 AGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 G+ L Y ++L +G++ +V+ G +A +IG+ AA+ + Sbjct: 238 GVIGRATGNQLTLYAVLLTREGEMLRKVTVRGPLAEAEDIGKKAAKEM 285 >gi|283457696|ref|YP_003362282.1| porphobilinogen deaminase [Rothia mucilaginosa DY-18] gi|283133697|dbj|BAI64462.1| porphobilinogen deaminase [Rothia mucilaginosa DY-18] Length = 454 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 95/372 (25%), Positives = 158/372 (42%), Gaps = 69/372 (18%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSL-------MDVHKIPPHNIV---IIPLSTKGDRI 50 M + +GTR S LAL + ++ H +V + + T+GD + Sbjct: 78 MSHHEYILGTRGSALALTQSRIAAETVTSLYTEHQAHHGAADAEVVDFTLRTVKTEGD-V 136 Query: 51 TNRTLTEIGGKGLFTEEIEKKLISG-------EIDCAVHSAKDMPTKLLKGLQISAYLPR 103 L +GG G+F + ++L+ G +D AVHS KD+P+ GL I+A L R Sbjct: 137 LTGPLATLGGTGVFAAALRQRLLDGENASEENRVDMAVHSLKDLPSAPCPGLVIAATLKR 196 Query: 104 EDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-- 161 ED RD ++ +L L S +GT S RR A L R D+ ++D RG + TR+ ++ Sbjct: 197 EDPRDALVARDGLTLDTLPEGSRVGTGSPRRAAQLRALRPDLEIVDIRGNVGTRIGRVKG 256 Query: 162 ----------------------------NNNKAHAILLAYAGIKRLKKEKVIKEILNIED 193 + A++LA +G+KRL KE++I E L+ Sbjct: 257 LEEHAGKQVVLRQNTETSERADHGVGTERSGDCDAVVLAVSGLKRLGKEELITEYLDPTR 316 Query: 194 FPPSPGQGAICIETHVN-----------NPKAQELVKVI-------NHEDTWDSVNCERA 235 P+PGQGA+ +E + +P+ V+ + NH +T +V+ ERA Sbjct: 317 MLPAPGQGALALEVRESEFENPDPAVLADPEVARPVRALGRALLAANHHETRLAVSAERA 376 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDA 292 L L+ C + I +A+ L +V + DG + + A +G Sbjct: 377 LLRRLEAGCAAPIGAYAHVVEGDLVLSVVVASPDGTDMLRHTSATAELDVPGAERLGVRV 436 Query: 293 AQYIRFISNKNV 304 A+ + + + Sbjct: 437 AEDLLQMGAAAL 448 >gi|255324252|ref|ZP_05365374.1| hydroxymethylbilane synthase [Corynebacterium tuberculostearicum SK141] gi|311740973|ref|ZP_07714798.1| hydroxymethylbilane synthase [Corynebacterium pseudogenitalium ATCC 33035] gi|255298768|gb|EET78063.1| hydroxymethylbilane synthase [Corynebacterium tuberculostearicum SK141] gi|311303775|gb|EFQ79853.1| hydroxymethylbilane synthase [Corynebacterium pseudogenitalium ATCC 33035] Length = 295 Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats. Identities = 91/301 (30%), Positives = 140/301 (46%), Gaps = 8/301 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F+IGTR S LA A R L+D + + ++T GD N E G G+FT Sbjct: 2 FQIGTRGSKLATTQAGHVRDWLIDA----GFDSQLHIVTTAGDV--NMAPVERIGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + L +GE D AVHS KD+PT R+D R+ ++ SL L + Sbjct: 56 QALREALYAGECDIAVHSFKDLPTA-PDERFRLVVPQRQDSREALVARDGLSLAQLPQGA 114 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTS+ RR + L R D+ + RG I+TR++K+ + + A+LLAYAG+ R Sbjct: 115 RVGTSAPRRISQLAALRPDLEIRPLRGNIDTRMSKVTDGELDAVLLAYAGLLRGGYADRA 174 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 EI F P+P QGA+ IE +A + I + + ERA LA L+ C Sbjct: 175 TEIFEPSVFMPAPAQGALAIEAVAG-TEAAAALDAIVDDRASAAAAGERAVLARLEAGCT 233 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + +A + G L G V A DG + +G+ +A ++G + + + Sbjct: 234 APVAATSRWDGDQLTVRGGVFALDGSRQLTATASGSAAEAADLGARISDELFAGGAAELL 293 Query: 306 N 306 Sbjct: 294 G 294 >gi|269837831|ref|YP_003320059.1| porphobilinogen deaminase [Sphaerobacter thermophilus DSM 20745] gi|269787094|gb|ACZ39237.1| porphobilinogen deaminase [Sphaerobacter thermophilus DSM 20745] Length = 311 Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats. Identities = 103/299 (34%), Positives = 158/299 (52%), Gaps = 3/299 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L + P ++ +ST GDR LT IGG+G+F Sbjct: 11 VRLGTRGSALAREQTRRVMAALAALR--PDLELIETIVSTAGDRDKRTPLTVIGGQGVFA 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E++ L++G +D AVHSAKD+PT+ + GL I A+ RED RDV +S +SL DL + Sbjct: 69 RELQTALLAGTVDVAVHSAKDLPTEPVPGLVIGAFFSREDARDVLVSRDGRSLADLPPGA 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS RR L R R D+ +D RG ++TRL K+ + A +LA AG+ R+ ++ I Sbjct: 129 RVGTSSRRRLVALRRLRPDLEAVDLRGNLDTRLRKVREGEVDAAILAAAGLLRMGWQEHI 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+++DF P+PGQGA+ IE ++P E++ +N + ER+FL L G C+ Sbjct: 189 TEFLSLDDFVPAPGQGALAIECRADDPAVNEMLAALNDPAAALAARTERSFLRALGGGCR 248 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI-RFISNKN 303 S I A G T+ ++ + +A A + R ++ + Sbjct: 249 SPIGAHATVSGDTVTLRVMLGDEAMTRVRLSTWTLPAAEAETRAGALAVEVQRSLAGAD 307 >gi|296115106|ref|ZP_06833747.1| porphobilinogen deaminase [Gluconacetobacter hansenii ATCC 23769] gi|295978207|gb|EFG84944.1| porphobilinogen deaminase [Gluconacetobacter hansenii ATCC 23769] Length = 358 Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats. Identities = 113/316 (35%), Positives = 162/316 (51%), Gaps = 15/316 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGGKG 62 P ++GTR SPLAL + L + +ST GD++ NR L EIGGKG Sbjct: 41 PLKVGTRASPLALVQTRAFLTVLTRFCPVLRDMGAFQEHQISTTGDQVLNRKLAEIGGKG 100 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD-- 120 LF +EI + L+ G ID AVHS KD+ T L GL ++ L RED RDV I D Sbjct: 101 LFAKEIHEALLDGRIDFAVHSLKDLETALPPGLVLACTLRREDARDVLILGPDCPTPDPM 160 Query: 121 -----LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 LA +++G +S+RR+A +L R D+ RG ++TRL+KL + A LLA AG Sbjct: 161 DPYSALAPGALVGCASVRRQAQMLHVRPDLRFGLLRGNVQTRLDKLAARQCEATLLALAG 220 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 ++RL E IL+ P+ GQG + + ++ + +EL+ I + ERA Sbjct: 221 LRRLGMEDRADVILDPTVMVPAAGQGIVGVTVRESDVELRELLAAIEDYEARAVATAERA 280 Query: 236 FLAELDGSCKSAIAGFAY----CKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 LAELDGSC++ I G+A G L+ G+V DG + S +G DA +G Sbjct: 281 LLAELDGSCRTPIGGYARLIPVVAGGAPELHLTGLVAREDGSFLLKRSISGAPSDAARLG 340 Query: 290 RDAAQYIRFISNKNVF 305 + +R S ++F Sbjct: 341 HALGRSLRADSPSDIF 356 >gi|149186168|ref|ZP_01864482.1| porphobilinogen deaminase [Erythrobacter sp. SD-21] gi|148830199|gb|EDL48636.1| porphobilinogen deaminase [Erythrobacter sp. SD-21] Length = 292 Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 152/288 (52%), Gaps = 4/288 (1%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 +A A ETR+ L H + ++P+ GD++ +R L +IGGK L+T E++ L G Sbjct: 1 MAQAHETRARLCAAHSWDEARVELVPVIASGDKVQDRPLADIGGKALWTRELDIWLAEGR 60 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 ID AVHS KD+ T G+ I+A LPRED DV + A SL+ + + +GTS+ RR A Sbjct: 61 IDAAVHSMKDVETIRPDGIAIAAILPREDKADVLLG--ATSLEAIPQGAKVGTSAPRRAA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 LL R D+ V+ RG + TR+ KL +A A LA AG+ RL EK + L ED+ P Sbjct: 119 QLLYARPDLEVVGIRGNVATRMAKLQAGEADATFLAAAGLVRLG-EKSVGVRLEPEDWLP 177 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 +P Q AI IE ++ +AQE++ I+H + + V ERA L L G+C S IA +G Sbjct: 178 APAQAAIGIECRASDERAQEVLAAIDHAHSREEVFAERALLEGLGGTCHSPIAALTRREG 237 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 L + + DG I D + R A + + +V Sbjct: 238 DALRMTAAIYSPDGAIRIAREARFEPGD-LAAPRQLAHELLGEAPDHV 284 >gi|312127739|ref|YP_003992613.1| porphobilinogen deaminase [Caldicellulosiruptor hydrothermalis 108] gi|311777758|gb|ADQ07244.1| porphobilinogen deaminase [Caldicellulosiruptor hydrothermalis 108] Length = 290 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 96/293 (32%), Positives = 150/293 (51%), Gaps = 6/293 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIG R S L+ + +P+ TKGD ++L + G+ Sbjct: 2 KKLRIGARDSRLSRIQVDIVARKIKQTL---GIECEFVPIKTKGDIDKTKSLKDFKSPGV 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L++ EID AVHS KD+P ++ +I A + RED RDV +S L Sbjct: 59 FVKEIERALLTREIDLAVHSLKDLPCEIDSNFEIVAVVEREDPRDVLVSKDGVGFYQLKP 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++ IGTSSLRR+ L R DI V++ RG IETRL+K+ + +++AYA +KRL + Sbjct: 119 NAKIGTSSLRREVHLKNLREDIQVVNIRGNIETRLSKIESEGLDGVIVAYAALKRLNLDS 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + I +I + P PGQGAICIE ++P + ++ IN + + ER L L G Sbjct: 179 YVSYIFDINEITPCPGQGAICIECLKDSPY-KSILSKINDVNAYIQTQFERLVLKFLGGG 237 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C S+I F +Y + +L D + S G++ D +++ ++ + Sbjct: 238 CHSSIGVFCKTDQDKIYAFASLLRGD--KLVKASIEGDKADFLSLANKLSKML 288 >gi|9971935|gb|AAG10497.1|AF279106_59 predicted porphobilinogen deaminase [uncultured marine gamma proteobacterium EBAC31A08] Length = 303 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 102/302 (33%), Positives = 151/302 (50%), Gaps = 6/302 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR S LA+ A L+ KI + ++P++++GD+ T++ L EIGGKGLF Sbjct: 2 KIRIATRQSELAMYQAKFVADELLA--KINNIKVELVPMTSEGDQ-TDKPLHEIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E L + E D AVHS KD+P KL +I + RE D+ +S +S + A + Sbjct: 59 ISTLESSLEADEADIAVHSLKDVPAKLDPKFKIISVFSRESPEDLLLSKDGKSFSEFARN 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S IGTS RRKA + R DI I RG I TR+ KLN+ +++A A IKRL ++ Sbjct: 119 STIGTSGPRRKAQINNLRPDIKTIPVRGNIATRIKKLNDGLFDGLVVAKAAIKRLGLKQN 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E +IE+ PS QG I IE + EL++ I + ER+F+A ++G+C Sbjct: 179 SYE-FSIEEMLPSASQGYIAIECLSDKKDIIELLENIGDPKELILASAERSFVAAMEGTC 237 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA-AQYIRFISNKN 303 S IA K + G +L+ +G + + D I I A K+ Sbjct: 238 LSPIAILCEDKNGQIKISGKILSYEGNEKIYKEKISSFQD-IAIDIMLFADEFILEGAKS 296 Query: 304 VF 305 + Sbjct: 297 LI 298 >gi|332668763|ref|YP_004451770.1| porphobilinogen deaminase [Cellulomonas fimi ATCC 484] gi|332337800|gb|AEE44383.1| porphobilinogen deaminase [Cellulomonas fimi ATCC 484] Length = 326 Score = 272 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 90/288 (31%), Positives = 134/288 (46%), Gaps = 16/288 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIGTR S LAL +L I + + T GDR +L +GG G+ Sbjct: 3 QQVRIGTRASTLALTQTGHVADALAAHG---GLAIETVRVRTDGDR-LTGSLASLGGAGV 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F + L+ G D AVHS KD+PT GL ++A PRED RD + +L DL Sbjct: 59 FVTALRDALLDGRCDVAVHSLKDLPTADAPGLVLAAVPPREDPRDALCARDGLTLADLPR 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-----NKAHAILLAYAGIKR 178 + +GT S RR A LL R D+ V+D RG ++TRL ++ A++LA AG+ R Sbjct: 119 GARVGTGSPRRAAQLLAARPDLDVVDIRGNVDTRLGRVAGSPTGPGDLDAVVLARAGLAR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNN------PKAQELVKVINHEDTWDSVNC 232 + + + + E+ + P+PGQGA+ +ET + ++ T +V Sbjct: 179 IGRLEAVTELFGPDVMLPAPGQGALAVETRAAGLTTDLAGPLHAALAALDDRPTRLAVLA 238 Query: 233 ERAFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRN 279 ERA LA L+ C + + A TL +V+ +DG Sbjct: 239 ERALLARLEAGCAAPVGTLATLDADGTLTLDAVVVRTDGTASLRRRAR 286 >gi|154508275|ref|ZP_02043917.1| hypothetical protein ACTODO_00771 [Actinomyces odontolyticus ATCC 17982] gi|153797909|gb|EDN80329.1| hypothetical protein ACTODO_00771 [Actinomyces odontolyticus ATCC 17982] Length = 344 Score = 272 bits (695), Expect = 7e-71, Method: Composition-based stats. Identities = 96/335 (28%), Positives = 156/335 (46%), Gaps = 29/335 (8%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV--IIPLSTKGDRITNRTLTEI 58 M + F +GTR S LALA + ++ + + + + T GD ++ L + Sbjct: 1 MTTRTFVLGTRGSRLALAQSTTVARAIEEAGARLGEEVRVNLEVVRTHGD-VSAAPLAAL 59 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GG G+F ++ L+ GE D AVHS KD+PT GL+I+A RED RD + +L Sbjct: 60 GGVGVFAAQLRLALLGGECDLAVHSFKDLPTAPTPGLRIAAVPQREDPRDALCAADGATL 119 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN---------------- 162 L +++GT S RR A +L R D+ V D RG + TRL+++ Sbjct: 120 ASLPEGALVGTGSPRRAAQVLAARPDLFVCDLRGNVPTRLSRVRGLDLGADAGTAPSALG 179 Query: 163 -NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH-VNNPKAQELVKV 220 + A++LA AG++R+ + ++L+ P+ QGA+ IET ++P + L+ Sbjct: 180 TGERLDAVVLALAGLRRIGLDAHATDVLDPAIMMPAASQGALAIETRDEDDPLLRALLGT 239 Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSR 278 +NH T + + ERA L+ L C + + FA S L V++ DG+ E S Sbjct: 240 LNHRPTALAASAERAVLSALGAGCAAPVGAFARVDEASSVLLLDARVMSVDGRERVEASG 299 Query: 279 NGNRCD------AINIGRDAAQYIRFISNKNVFNF 307 + D A +G D + + V + Sbjct: 300 SLALTDSVGLDEAARLGEDVVRQLLAGGAAEVTDL 334 >gi|288574447|ref|ZP_06392804.1| porphobilinogen deaminase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570188|gb|EFC91745.1| porphobilinogen deaminase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 454 Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 140/291 (48%), Gaps = 10/291 (3%) Query: 10 TRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIE 69 +R S LA A E +L + I +ST GD + L+ GG G F + +E Sbjct: 160 SRKSALARAQTMEAARALAKK----GLPVEIKTMSTCGDEKQDCHLSAFGGNGAFVKCLE 215 Query: 70 KKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGT 129 + ++ G+ D A+HS KD+P+ L GL++ A LPR DV +S+ L+ L +V+GT Sbjct: 216 EAIMEGKGDGAIHSLKDVPSVLPDGLELVAVLPRASTSDVIVSNHKGGLEGLPAGAVVGT 275 Query: 130 SSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEIL 189 SSLRRKA L R D+ RG + TRL KL + A AI+LA AG+ RL L Sbjct: 276 SSLRRKAQLAITRPDLDYTLIRGNVNTRLAKLQSGDADAIVLAKAGLDRLGISPEGATTL 335 Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 F P+P QG I +E + + E + INH TW ER L L C A Sbjct: 336 P---FLPAPCQGIIAVEARSGS-RLAEEFRAINHRPTWLMALAERELLESLQVGCHVPFA 391 Query: 250 GFAYCKGSTLYFYGIVLASDGKIF-HEVS-RNGNRCDAINIGRDAAQYIRF 298 + G L L+ DG+ E S + DA ++GRD A I+ Sbjct: 392 ALSEWVGGELRLRAQTLSYDGRHIDFEGSLAVRSDDDARDLGRDVALSIKA 442 >gi|162147854|ref|YP_001602315.1| porphobilinogen deaminase [Gluconacetobacter diazotrophicus PAl 5] gi|209542474|ref|YP_002274703.1| porphobilinogen deaminase [Gluconacetobacter diazotrophicus PAl 5] gi|161786431|emb|CAP56013.1| Porphobilinogen deaminase [Gluconacetobacter diazotrophicus PAl 5] gi|209530151|gb|ACI50088.1| porphobilinogen deaminase [Gluconacetobacter diazotrophicus PAl 5] Length = 367 Score = 271 bits (694), Expect = 9e-71, Method: Composition-based stats. Identities = 111/320 (34%), Positives = 159/320 (49%), Gaps = 19/320 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGGKG 62 P R+GTR SPLAL + L + ++T GD++ NR L EIGGKG Sbjct: 46 PLRVGTRASPLALVQTRAFLTMLTRFCPVLRDMGAFQEHQINTTGDQVQNRRLAEIGGKG 105 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS----- 117 LF +EI L G ID AVHS KD+ T L GL ++ L RED RD I Sbjct: 106 LFAKEIHDALSDGRIDFAVHSLKDLETTLPPGLVLACTLRREDARDALILGPGAGGRHDA 165 Query: 118 ------LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILL 171 L ++++G +S+RR+A +L R D+ RG ++TRL+KL + A LL Sbjct: 166 ADAADPYAALPRNALVGCASVRRQAQMLHVRPDLRFGLLRGNVQTRLDKLAARQCDATLL 225 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG++RL E +L+ E P+ GQG + + ++ + +EL+ I + Sbjct: 226 ALAGLRRLGMEDRADIVLDPEIMVPAAGQGIVGVTVRESDVELRELLAAIEDYEARAVAT 285 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGS------TLYFYGIVLASDGKIFHEVSRNGNRCDA 285 ERA LAELDGSC++ I G+A +L G+V DG + G R DA Sbjct: 286 AERALLAELDGSCRTPIGGYARLVPGLAGAEASLRLTGLVAREDGSFLLRRTVTGLRADA 345 Query: 286 INIGRDAAQYIRFISNKNVF 305 +GR+ + +R S +VF Sbjct: 346 EEMGRELGRSLRMDSPSDVF 365 >gi|255326986|ref|ZP_05368062.1| hydroxymethylbilane synthase [Rothia mucilaginosa ATCC 25296] gi|255296203|gb|EET75544.1| hydroxymethylbilane synthase [Rothia mucilaginosa ATCC 25296] Length = 377 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 91/372 (24%), Positives = 158/372 (42%), Gaps = 69/372 (18%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVH----------KIPPHNIVIIPLSTKGDRI 50 M + +GTR S LAL + ++ ++ + + + T+GD + Sbjct: 1 MSHHEYTLGTRGSALALTQSRIAAETVTSLYTEHQAHHGAENPEAVSFELRTVKTEGD-V 59 Query: 51 TNRTLTEIGGKGLFTEEIEKKLISG-------EIDCAVHSAKDMPTKLLKGLQISAYLPR 103 L +GG G+F + ++L+ G +D AVHS KD+P+ GL ++A L R Sbjct: 60 LTGPLATLGGTGVFAAALRQRLLDGENASEENRVDMAVHSLKDLPSAPCPGLVVAATLKR 119 Query: 104 EDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-- 161 ED RD ++ ++ L S +GT S RR A L R D+ ++D RG + TR+ ++ Sbjct: 120 EDPRDALVARDGLTVDTLPEGSRVGTGSPRRAAQLRALRPDLEIVDVRGNVGTRIGRVKG 179 Query: 162 ----------------------------NNNKAHAILLAYAGIKRLKKEKVIKEILNIED 193 + A++LA +G+KRL KE++I E L+ Sbjct: 180 LEEHAGKQVVLRQNAETSERADHGVGTERSGDCDAVVLAVSGLKRLGKEELITEYLDPTR 239 Query: 194 FPPSPGQGAICIETHVN-----------NPKAQELVKVI-------NHEDTWDSVNCERA 235 P+PGQGA+ +E + +P+ V+ + NH +T +V+ ERA Sbjct: 240 MLPAPGQGALALEVRESEFENPDSAVLADPEVARPVRALGRALLAANHHETRLAVSAERA 299 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDA 292 L L+ C + I +A+ L +V + DG + + A +G Sbjct: 300 LLRRLEAGCAAPIGAYAHVVEGDLVLNVVVASPDGTDMLRHTSATAELDVPGAERLGVRV 359 Query: 293 AQYIRFISNKNV 304 A+ + + + Sbjct: 360 AEDLLQMGAAAL 371 >gi|311111780|ref|YP_003983002.1| hydroxymethylbilane synthase [Rothia dentocariosa ATCC 17931] gi|310943274|gb|ADP39568.1| hydroxymethylbilane synthase [Rothia dentocariosa ATCC 17931] Length = 371 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 98/363 (26%), Positives = 149/363 (41%), Gaps = 64/363 (17%) Query: 5 PFRIGTRCSPLALAH----AFETRSSL----MDVHKIPPHNIVIIPLSTKGDRITNRTLT 56 P+ +GTR S LAL A + + I + T GD + L Sbjct: 4 PYILGTRGSALALTQSTLAAEHIVQMFNAHSREHGAERTLSFDITTVKTDGD-VLTGPLA 62 Query: 57 EIGGKGLFTEEIEKKLISGE----IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS 112 +GG G+F + ++L+ G+ +D AVHS KD+P + GL I+A L RED RD ++ Sbjct: 63 TLGGTGVFAAALRQRLLDGDTPDGVDVAVHSLKDLPAEPCPGLVIAAILEREDPRDALVA 122 Query: 113 HTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------- 161 +L L + +GT S RR A + R D+ ++D RG + TR+ ++ Sbjct: 123 RDNLTLDTLPTGARVGTGSPRRAAQVHALRPDLEIVDIRGNVGTRIARVKGLEEHGNRQV 182 Query: 162 -------------------NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGA 202 N A++LA +G+KRL KE VI E L+ P+PGQGA Sbjct: 183 IVRDSAETDEAAHRGIGTENTGDCDAVILAVSGLKRLGKESVITEYLDPSRMLPAPGQGA 242 Query: 203 ICIETHV---NNPKAQEL---------------VKVINHEDTWDSVNCERAFLAELDGSC 244 + IE NP L + +H +T V ER L L+ C Sbjct: 243 LAIEVRETEFANPDTATLFNSEISQPVRTLGEALIAADHFETHLEVTAERRLLRRLEAGC 302 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHE-VSRNG--NRCDAINIGRDAAQYIRFISN 301 + I +A K L +V + DG S G + A +G A+ + + Sbjct: 303 AAPIGAYATVKDGDLVLTAVVASPDGTESLRHTSATGELDVPGAERLGIRVAEDLLQMGA 362 Query: 302 KNV 304 + Sbjct: 363 AAL 365 >gi|297159419|gb|ADI09131.1| porphobilinogen deaminase [Streptomyces bingchenggensis BCW-1] Length = 345 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 92/315 (29%), Positives = 153/315 (48%), Gaps = 19/315 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + + ++ V P + ++ ++T+GD ++ L +IGG G+F Sbjct: 29 PLRLGTRRSALAMAQSGQIADAVRRVTGRP---VELVEITTRGD-VSREDLAQIGGTGVF 84 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L+ GEID AVHS KD+PT L ++A RED RD I+ + +L Sbjct: 85 ATALREALLRGEIDFAVHSLKDLPTAQPDDLVLAALPAREDPRDALIARDGLTFAELPPG 144 Query: 125 SVIGTSSLRRKALLLRWRSD----ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + IGT S RR + L W I + RG ++TR+ + + + A++LA AG+ RL Sbjct: 145 ARIGTGSPRRTSQLRAWARSLGLRIETVPIRGNVDTRIGYVRSGELDAVVLAAAGLARLG 204 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + EIL+ + P+PGQGA+ +E N + ++ T +V ER+ LA L Sbjct: 205 RLDEATEILDADHILPAPGQGALAVECAAANAALAAQLAELDDPLTRVAVTAERSLLAAL 264 Query: 241 DGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR-----CDAINI-G 289 + C + + A G + G+V +DG ++S G +A + G Sbjct: 265 EAGCSAPVGALADLLGDGQAVTEMRLRGVVGTTDGSSLVQLSITGPVPTAPGEEAAQLMG 324 Query: 290 RDAAQYIRFISNKNV 304 + A + + Sbjct: 325 HELAAEMLAKGAAGL 339 >gi|282853361|ref|ZP_06262698.1| hydroxymethylbilane synthase [Propionibacterium acnes J139] gi|282582814|gb|EFB88194.1| hydroxymethylbilane synthase [Propionibacterium acnes J139] Length = 334 Score = 270 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 90/329 (27%), Positives = 141/329 (42%), Gaps = 32/329 (9%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L ++ + ++T GD + +L +GG G+F Sbjct: 4 IRLGTRASTLATTQSEMVARLLRS----EGLDVDLTTITTHGDT-STASLAAMGGIGVFA 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 I L+ GE D AVHS KD+PT GL I A R D RD ++ +L DL + Sbjct: 59 SAIRATLLKGEADIAVHSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDLPQEA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------NKAHAILLAYAG 175 +GT S RR A LL R D++++D RG ++TRL ++ A++LA +G Sbjct: 119 SVGTGSPRRAAQLLAVRPDLTIVDIRGNVDTRLGRVKGLGHYAKGGGKEDLDAVVLAASG 178 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK---AQELVKVINHEDTWDSVNC 232 + RL + E L+ P+P QGA+ +E + + + + I+ T + Sbjct: 179 LARLGHSGTVTEFLDPSVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTRLAATA 238 Query: 233 ERAFLAELDGSCKSAIAGFAYCK------GSTLYFYGIVLASDGKIFHE--------VSR 278 ERA L+ L+ C + I A K L +V DG Sbjct: 239 ERAVLSHLEAGCAAPIGALAQLKPVSGSSPQVLTLDVVVATVDGSRIIREQVSVELPAEV 298 Query: 279 NGNRCDAINIGRDAAQYIRFISNKNVFNF 307 + A +G AA+ + +V + Sbjct: 299 DSALAAAHTLGVTAAEELLDDGAADVADL 327 >gi|55976374|sp|Q6AB05|HEM3_PROAC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|313772844|gb|EFS38810.1| porphobilinogen deaminase [Propionibacterium acnes HL074PA1] gi|313802779|gb|EFS43997.1| porphobilinogen deaminase [Propionibacterium acnes HL110PA2] gi|313806434|gb|EFS44941.1| porphobilinogen deaminase [Propionibacterium acnes HL087PA2] gi|313810983|gb|EFS48697.1| porphobilinogen deaminase [Propionibacterium acnes HL083PA1] gi|313815286|gb|EFS53000.1| porphobilinogen deaminase [Propionibacterium acnes HL059PA1] gi|313817301|gb|EFS55015.1| porphobilinogen deaminase [Propionibacterium acnes HL046PA2] gi|313824153|gb|EFS61867.1| porphobilinogen deaminase [Propionibacterium acnes HL036PA2] gi|313826520|gb|EFS64234.1| porphobilinogen deaminase [Propionibacterium acnes HL063PA1] gi|313828701|gb|EFS66415.1| porphobilinogen deaminase [Propionibacterium acnes HL063PA2] gi|313831749|gb|EFS69463.1| porphobilinogen deaminase [Propionibacterium acnes HL007PA1] gi|313840063|gb|EFS77777.1| porphobilinogen deaminase [Propionibacterium acnes HL086PA1] gi|314916105|gb|EFS79936.1| porphobilinogen deaminase [Propionibacterium acnes HL005PA4] gi|314917026|gb|EFS80857.1| porphobilinogen deaminase [Propionibacterium acnes HL050PA1] gi|314921302|gb|EFS85133.1| porphobilinogen deaminase [Propionibacterium acnes HL050PA3] gi|314955012|gb|EFS99418.1| porphobilinogen deaminase [Propionibacterium acnes HL027PA1] gi|314959051|gb|EFT03153.1| porphobilinogen deaminase [Propionibacterium acnes HL002PA1] gi|314961324|gb|EFT05425.1| porphobilinogen deaminase [Propionibacterium acnes HL002PA2] gi|314977093|gb|EFT21188.1| porphobilinogen deaminase [Propionibacterium acnes HL045PA1] gi|314989126|gb|EFT33217.1| porphobilinogen deaminase [Propionibacterium acnes HL005PA3] gi|315078439|gb|EFT50470.1| porphobilinogen deaminase [Propionibacterium acnes HL053PA2] gi|315082761|gb|EFT54737.1| porphobilinogen deaminase [Propionibacterium acnes HL027PA2] gi|315086120|gb|EFT58096.1| porphobilinogen deaminase [Propionibacterium acnes HL002PA3] gi|315087704|gb|EFT59680.1| porphobilinogen deaminase [Propionibacterium acnes HL072PA1] gi|315102048|gb|EFT74024.1| porphobilinogen deaminase [Propionibacterium acnes HL046PA1] gi|327331372|gb|EGE73111.1| hydroxymethylbilane synthase [Propionibacterium acnes HL096PA2] gi|327333359|gb|EGE75079.1| hydroxymethylbilane synthase [Propionibacterium acnes HL096PA3] gi|327334882|gb|EGE76593.1| hydroxymethylbilane synthase [Propionibacterium acnes HL097PA1] gi|327449721|gb|EGE96375.1| porphobilinogen deaminase [Propionibacterium acnes HL043PA2] gi|327454571|gb|EGF01226.1| porphobilinogen deaminase [Propionibacterium acnes HL087PA3] gi|327456643|gb|EGF03298.1| porphobilinogen deaminase [Propionibacterium acnes HL083PA2] gi|328755626|gb|EGF69242.1| porphobilinogen deaminase [Propionibacterium acnes HL087PA1] gi|328756706|gb|EGF70322.1| porphobilinogen deaminase [Propionibacterium acnes HL025PA2] gi|328761895|gb|EGF75405.1| hydroxymethylbilane synthase [Propionibacterium acnes HL099PA1] gi|332674709|gb|AEE71525.1| porphobilinogen deaminase [Propionibacterium acnes 266] Length = 334 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 91/329 (27%), Positives = 141/329 (42%), Gaps = 32/329 (9%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L ++ + ++T GD + +L +GG G+F Sbjct: 4 IRLGTRASTLATTQSEMVAGLLRS----EGLDVNLTTITTHGDT-STASLAAMGGIGVFA 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 I L+ GE D AVHS KD+PT GL I A R D RD ++ +L DL + Sbjct: 59 SAIRAALLEGEADIAVHSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDLPQEA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------NKAHAILLAYAG 175 +GT S RR A LL R D++++D RG ++TRL ++ A++LA +G Sbjct: 119 SVGTGSPRRAAQLLAVRPDLTIVDIRGNVDTRLGRVKGLGRYAKNGGKEDLDAVVLAASG 178 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK---AQELVKVINHEDTWDSVNC 232 + RL + E L+ P+P QGA+ +E + + + + I+ T + Sbjct: 179 LARLGHSGAVTEFLDPSVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTRLAATA 238 Query: 233 ERAFLAELDGSCKSAIAGFAYCKG------STLYFYGIVLASDGKIFHE--------VSR 278 ERA L+ L+ C + I A K L +V A DG Sbjct: 239 ERAVLSHLEAGCAAPIGALAQLKPVSGKSLQVLTLDVVVAAVDGSRTVREQVSVELPAEV 298 Query: 279 NGNRCDAINIGRDAAQYIRFISNKNVFNF 307 A +G AA+ + +V + Sbjct: 299 EPALAAAHTLGVTAAEELLDDGAADVADL 327 >gi|192290090|ref|YP_001990695.1| porphobilinogen deaminase [Rhodopseudomonas palustris TIE-1] gi|192283839|gb|ACF00220.1| porphobilinogen deaminase [Rhodopseudomonas palustris TIE-1] Length = 326 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 95/320 (29%), Positives = 145/320 (45%), Gaps = 20/320 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-L 63 P RIGTR S +ALA + L + II T GD L GGKG Sbjct: 4 PVRIGTRKSVMALAQTEDIAKQLSAAAS--ELDPQIIKFETVGDSDQISKLLPHGGKGGA 61 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPT-KLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 F EI ++ GE+ CA+HS KDMP + GL ++A L R+ D + +L++L Sbjct: 62 FVAEIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPACDSLVLRKGLTLEELK 121 Query: 123 L----HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------------NKA 166 IGT+++RR A R ++ VI FRG ++R+ KL+N A Sbjct: 122 KSRGKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADSRMRKLDNREKQRMPDGSEVGPA 181 Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226 A+++A AGI+R+ I E+ P+ GQG + +E V+ K ++ + +I++ + Sbjct: 182 DALIMARAGIERVGFVDRIAHDFTPEEMLPAAGQGIVAVECPVHEWKTRQYLALIDNHQS 241 Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286 + ER L L+G C S IA + G + VL +G +F E +R G Sbjct: 242 RLCCDAEREVLWVLNGHCNSPIAAHSVITGDEMTLRASVLDLEGGMFIEAARTGPANRPR 301 Query: 287 NIGRDAAQYIRFISNKNVFN 306 +GR + V Sbjct: 302 ELGRTVGLELLDKGAAAVIE 321 >gi|90422760|ref|YP_531130.1| porphobilinogen deaminase [Rhodopseudomonas palustris BisB18] gi|90104774|gb|ABD86811.1| hydroxymethylbilane synthase [Rhodopseudomonas palustris BisB18] Length = 326 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 97/320 (30%), Positives = 151/320 (47%), Gaps = 20/320 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-L 63 P RIGTR S +ALA + L ++ I+ T GD L GGKG Sbjct: 4 PVRIGTRKSIMALAQTEDIARRLSAAAS--ELDVEIVKFETVGDSDQVSKLLPHGGKGGA 61 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKDL- 121 F EI + +G+++ +HS KDMP + GL I A L R+ D + +L+DL Sbjct: 62 FVAEIRAAVTAGKLEACMHSLKDMPGNEDTPGLIIGATLSRDPPTDALVLRKGLTLEDLR 121 Query: 122 ---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------------NKA 166 IGT+++RR A R +++VI FRG +TR+ KL+N A Sbjct: 122 KSRGKGYTIGTNAVRRAAYAKRLFPEVNVIHFRGAADTRVRKLDNAEKQRLPDGGHVGPA 181 Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226 A+++A +G++R+ I ++ PS GQG + +E VNN + ++ +++I+ Sbjct: 182 DALIMARSGLERVGFVDRIVHDFTPQEMLPSAGQGIVAVECAVNNWQIRKYLELIDDPVA 241 Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286 S + ER L L+G C S +A F+ KGS + VL +G +F E SR+G Sbjct: 242 RLSCDAEREVLWVLNGHCNSPMAAFSTIKGSEMTLSASVLDEEGGLFIEASRSGPANRPR 301 Query: 287 NIGRDAAQYIRFISNKNVFN 306 +GR A + + Sbjct: 302 ELGRAVALELLDKGAAAIIE 321 >gi|297516477|ref|ZP_06934863.1| porphobilinogen deaminase [Escherichia coli OP50] Length = 221 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 108/208 (51%) Query: 98 SAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETR 157 RED RD F+S+ +L L S++GTSSLRR+ L R D+ + RG + TR Sbjct: 4 VTICEREDPRDAFVSNNYDNLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTR 63 Query: 158 LNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217 L+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + +EL Sbjct: 64 LSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTREL 123 Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277 + +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 124 LAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGE 183 Query: 278 RNGNRCDAINIGRDAAQYIRFISNKNVF 305 R G DA +G A+ + + + Sbjct: 184 RRGAPQDAEQMGISLAEELLNNGAREIL 211 >gi|300770169|ref|ZP_07080048.1| hydroxymethylbilane synthase [Sphingobacterium spiritivorum ATCC 33861] gi|300762645|gb|EFK59462.1| hydroxymethylbilane synthase [Sphingobacterium spiritivorum ATCC 33861] Length = 528 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 90/314 (28%), Positives = 145/314 (46%), Gaps = 27/314 (8%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K IGTR S LA+ A + L + + + T+GD I + L ++ G Sbjct: 1 MNRK-LIIGTRGSQLAMWQANHIKDRLAAA----GIDSELKVIKTQGDIIQHLRLDKLEG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----Q 116 KG FT+E+E++L+S ID AVHS KD+PT GL I+A RE ++ I + Sbjct: 56 KGFFTKELEEELLSSTIDLAVHSHKDLPTVNPPGLIIAAVSERESPAELLIVLKDCVDIK 115 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L ++ +GTSS RRKA LL R D+ D RG ++TR+ KL + AI+LA AG+ Sbjct: 116 KRLSLKHNATVGTSSNRRKAQLLSLRPDLEFDDLRGNLQTRIQKLRDENYDAIILAKAGV 175 Query: 177 KR--LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 +R + + E + + P+P QG + I+ ++ + E ++VI++++ + + ER Sbjct: 176 ERIDMDLSEFYVEEIPPVELIPAPAQGVLAIQIRESDQELYEALQVIHNKEVAEVIAVER 235 Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLA-----SDGKIFHEVSRNGNRCDAINIG 289 L D C + + + + V D S G Sbjct: 236 KVLNLFDAGCHAPLGCYCRKSEGKYEAWTSVADTSDEFPDRLYIQRDSTEG--------- 286 Query: 290 RDAAQYIRFISNKN 303 A+ I K+ Sbjct: 287 --MAEEIFAKFAKD 298 >gi|168334266|ref|ZP_02692463.1| uroporphyrinogen III synthase/methyltransferase [Epulopiscium sp. 'N.t. morphotype B'] Length = 785 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 99/300 (33%), Positives = 145/300 (48%), Gaps = 11/300 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 F +GTR S LA+A + + + + P I + TKGD IT L +IG KGLF Sbjct: 4 TFTVGTRGSALAIAQTKQIIALMQQ--QNPDATFSIKIIQTKGDAITEIPLDKIGDKGLF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSLKDLA 122 EIE +L+SG+ID A+HS KD+P+ + GL I+ R +D + SL + Sbjct: 62 VSEIEHQLLSGQIDIAIHSYKDLPSNITPGLIIAHPPARAPRQDALVLRDGTISSLDAIP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ I T SLRRK LL R D++V+ RG I+TRL KL + I++A AG+ RL Sbjct: 122 RNATIATGSLRRKLQLLHHRPDLNVVPIRGNIDTRLKKL--SDVDGIVIAAAGLARLDLA 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + + P+ QGAI I+ + A I+ T V+ ERAFL+ +DG Sbjct: 180 HKISYLFPEDILVPAAAQGAIAIQCRATDTTAIACANSISDSTTALEVSAERAFLSAIDG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIRFI 299 SC + A+ T+Y I + F S + A +G A+ + Sbjct: 240 SCHIPVGATAHLIDDTMYLKAIFGNT--TTFITHSAEAHVTTEIQAQALGIATARSVLAQ 297 >gi|91978235|ref|YP_570894.1| porphobilinogen deaminase [Rhodopseudomonas palustris BisB5] gi|91684691|gb|ABE40993.1| hydroxymethylbilane synthase [Rhodopseudomonas palustris BisB5] Length = 330 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 92/322 (28%), Positives = 148/322 (45%), Gaps = 20/322 (6%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K P RIGTR S +ALA + L ++ I+ T GD L GGKG Sbjct: 6 KIPVRIGTRKSVMALAQTEDIAKQLRAAAS--ELDVEIVKFETVGDSDQISKLLPHGGKG 63 Query: 63 -LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 F EI +I+G++ A+HS KDMP + GL I A L R+ D + +L++ Sbjct: 64 GAFVAEIRAAVIAGQLQAAMHSLKDMPGNEDTPGLVIGATLARDPATDALVLREGLTLEE 123 Query: 121 LAL----HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------------N 164 L IGT+++RR A R +++VI FRG +TR+ KL+ Sbjct: 124 LKKSRGKGYTIGTNAVRRAAYAKRLFPEVNVIHFRGAADTRIRKLDAREKQRLPDGGEVG 183 Query: 165 KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224 A A+++A AG++R+ I ++ PS GQG + +E V++ + + + +I+ Sbjct: 184 PADALIMARAGLERVGFVDRIVHDFTPQEMLPSAGQGIVAVECAVDDWQTRRYLAMIDDP 243 Query: 225 DTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284 + + ER L L+G C S +A + G+ + + VL +G +F E +R+G Sbjct: 244 KSRLCCDAEREVLWVLNGHCNSPMAAHSTVNGAEMTLHASVLDEEGGLFIETTRSGPANR 303 Query: 285 AINIGRDAAQYIRFISNKNVFN 306 +GR + V Sbjct: 304 PRELGRAVGLDLLDKGAAAVIE 325 >gi|146338934|ref|YP_001203982.1| porphobilinogen deaminase [Bradyrhizobium sp. ORS278] gi|146191740|emb|CAL75745.1| porphobilinogen deaminase [Bradyrhizobium sp. ORS278] Length = 325 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 95/324 (29%), Positives = 146/324 (45%), Gaps = 22/324 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + FRIGTR S +ALA E L IP +I I+ T GD L GG Sbjct: 1 MTR--FRIGTRKSTMALAQTEEIARRLQAA--IPSLDIEIVKFETTGDSDQTSKLLTHGG 56 Query: 61 KG-LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSL 118 KG F EI + ++ G++ A+HS KDMP + GL I+A L R+ DV + +L Sbjct: 57 KGGAFVAEIRRAMLDGKLHAAMHSLKDMPGNEETPGLVIAALLSRDPPGDVLVLRKGLAL 116 Query: 119 KDLAL----HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--------- 165 +D IGT+++RR A R +I FRG +TR+ KL+N + Sbjct: 117 EDFRKDGGRGFKIGTNAVRRAAYARRLFPHAELIHFRGAADTRIRKLDNGELQRMPDGGA 176 Query: 166 ---AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 A A+++A +G++R+ + D P+ GQG + +E ++ + + ++ ++ Sbjct: 177 VGPADALIMARSGLERVGLSDRASHEFPVADMLPAVGQGIVAVECPASDFETRRILATVD 236 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 + ER L L+G C S IAGF+ G+ + VL DG F E R G Sbjct: 237 DAAARTCADAEREVLWVLNGHCNSPIAGFSTIDGAQMTLTASVLDEDGGRFIEAQRTGPA 296 Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306 +GR + + Sbjct: 297 DRPRELGRAVGLELLASGAAALIE 320 >gi|213583404|ref|ZP_03365230.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 206 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 84/202 (41%), Positives = 118/202 (58%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P Sbjct: 5 PGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVHSMKDVPVAFPD 64 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL DL S++GTSSLRR+ L R D+ + RG Sbjct: 65 GLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL KL+N AI+LA AG+KRL E I+ L + P+ GQGA+ IE +++ + Sbjct: 125 VGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTALPPDVSLPAVGQGAVGIECRLDDAR 184 Query: 214 AQELVKVINHEDTWDSVNCERA 235 Q L+ +NH T V ERA Sbjct: 185 TQALLAPLNHSQTALRVTAERA 206 >gi|332666630|ref|YP_004449418.1| porphobilinogen deaminase [Haliscomenobacter hydrossis DSM 1100] gi|332335444|gb|AEE52545.1| porphobilinogen deaminase [Haliscomenobacter hydrossis DSM 1100] Length = 300 Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats. Identities = 90/305 (29%), Positives = 151/305 (49%), Gaps = 17/305 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD--RITNRTLTEIGGK 61 + RIGTR S LAL A TR L + + ++ + T GD + N + +I GK Sbjct: 3 QTIRIGTRGSKLALWQAEFTREKLREA----GYASELVIIKTTGDNTQHLNLSFDKIEGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD- 120 G FT+EIE L+ G++D AVHS KDMPT GL ++A RED D + +SL++ Sbjct: 59 GFFTKEIEDALLRGDVDMAVHSMKDMPTSSPDGLVLTAVSYREDPADWLLVRK-ESLEEG 117 Query: 121 ----LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + ++GTSS RRKA +L R D ++ D RG + TR++KL + AI+LA AG+ Sbjct: 118 QRFQLKQNPIVGTSSARRKAQILDLRPDATLKDIRGNVPTRVDKLLQGEFDAIMLAAAGL 177 Query: 177 KRLKKE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 RL+ + V + +F P+P QG + + + ++ ++ ++H D N ER Sbjct: 178 SRLELDLSAVHVVKFDPREFIPAPAQGVLAYQACTEDKVIRKALQHLHHSDVSLVTNIER 237 Query: 235 AFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 L ++G C+ + + + + + +V ++ + + A Sbjct: 238 RILQLMEGGCQMPLGVYCEHDAAGNYHVWAAKADAWNAPVKKVRQSSSTS--YLLAEKVA 295 Query: 294 QYIRF 298 + ++ Sbjct: 296 EELKK 300 >gi|84490120|ref|YP_448352.1| porphobilinogen deaminase [Methanosphaera stadtmanae DSM 3091] gi|84373439|gb|ABC57709.1| HemC [Methanosphaera stadtmanae DSM 3091] Length = 290 Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats. Identities = 92/293 (31%), Positives = 153/293 (52%), Gaps = 6/293 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LA +L ++ + T GD+I N L I KG+FT Sbjct: 1 MIVGTRGSKLATTQTKTVVKALEEITGEEIET---KIIKTTGDKIKNSQLYNIDAKGIFT 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ LI G ID AVHS KD+P++L L I+A RE I +V IS+ S +L ++ Sbjct: 58 KELDTALIDGSIDFAVHSFKDLPSELNDQLTITAIPQREAINEVLISN--YSWDELPENA 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS+RR+A I RG I+TR+ K+ + A ++A AGI RL ++ I Sbjct: 116 TLGTSSVRREAFCKLHGKKIQTKPIRGNIDTRIRKVEEGEYDATIMALAGINRLGLQEHI 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 KE+ + + P GQGA+ + TH + + +++ +NHED+ E+A L + C+ Sbjct: 176 KEVFDEQYITPPAGQGALAVMTH-KDSEYNDVISKLNHEDSRIEAMTEKAILETIGVGCQ 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 I + G+ + + +L+ +GK+ +V++ ++ +AIN + +R Sbjct: 235 WPIGIVSKVDGNNINIHCKLLSPEGKLLADVNKTTDKNNAINTAKVIGTKLRE 287 >gi|154283391|ref|XP_001542491.1| porphobilinogen deaminase [Ajellomyces capsulatus NAm1] gi|150410671|gb|EDN06059.1| porphobilinogen deaminase [Ajellomyces capsulatus NAm1] Length = 345 Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 99/319 (31%), Positives = 147/319 (46%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K F IGTR S LAL R +L P + I+ D L E K Sbjct: 17 TKTTFTIGTRKSKLALVQTDLVRDALKAA--WPQYEFDILTKDAAADLDKVTPLREFTSK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118 L+TEE+E+ L++ +ID VHS KD+PT++ K + A +PRED RDV + +L Sbjct: 75 NLWTEELEELLLAKQIDLVVHSLKDVPTQIPKTCILGAMMPREDPRDVLVIKKGLPNMTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGI 176 +L S++GTSS+RR A L R + D RG I+TRL KL + A++LA AG+ Sbjct: 135 AELPAGSIVGTSSVRRIAQLSRHYPHLIAKDVRGNIDTRLAKLDAQDGPFSALILAAAGL 194 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R + I L+ +D + GQG + IE N+ + +E+V+ I T + ER Sbjct: 195 LRTGQGARISHYLDSKDGKMLHAVGQGGLGIEIRANDERMKEMVEKIGDRKTTFACLAER 254 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 L L+G C + + TL IV + DGK E+ + +A Sbjct: 255 NLLRTLEGGCSAPLGVETEWVQDADGKETLMLRAIVSSVDGKEAVEIEKYEKVTSGEEAE 314 Query: 287 NIGRDAAQYIRFISNKNVF 305 G+ A + + + Sbjct: 315 VFGKKVADELVVLGAGRIL 333 >gi|50954011|ref|YP_061299.1| porphobilinogen deaminase [Leifsonia xyli subsp. xyli str. CTCB07] gi|55976376|sp|Q6AHF1|HEM3_LEIXX RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|50950493|gb|AAT88194.1| porphobilinogen deaminase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 329 Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 83/312 (26%), Positives = 140/312 (44%), Gaps = 17/312 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR SPLA+A +++ +I ++ ++T GD + +L+E+GG G+F Sbjct: 15 LRVGTRGSPLAVAQTQAVSAAVARATGF---DIELVTVTTHGDT-SRESLSELGGTGVFA 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + L +GE D VHS KD+PT GL + A R D RD + +L + Sbjct: 71 TALRDALRNGECDLVVHSLKDLPTAPAPGLVLGAVPKRADARDTLCARDGLRFGELPEGA 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT S RR A L R + ++D RG ++TRL++++ A++LA AG+ RL + Sbjct: 131 SVGTGSPRRAAQLRAQRPGLDIVDIRGNVDTRLSRVSAGDLDAVVLAAAGLGRLGRLDAA 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPK----AQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ P +PGQGA+ +E + + + ++H T + ERA LA L+ Sbjct: 191 TDFFSLSTMPTAPGQGALALEVREGDERGRGPIARALAAVDHATTCAATTAERAVLAGLE 250 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---------CDAINIGRDA 292 C + + A L+ V DG S A ++G Sbjct: 251 AGCAAPVGATAMIDDGLLFLTATVYRPDGAAQLTASHAATPDSFGAAHLDEAARDVGERV 310 Query: 293 AQYIRFISNKNV 304 + ++ Sbjct: 311 VAELLASGAADL 322 >gi|227538630|ref|ZP_03968679.1| porphobilinogen deaminase [Sphingobacterium spiritivorum ATCC 33300] gi|227241549|gb|EEI91564.1| porphobilinogen deaminase [Sphingobacterium spiritivorum ATCC 33300] Length = 528 Score = 268 bits (687), Expect = 6e-70, Method: Composition-based stats. Identities = 87/295 (29%), Positives = 140/295 (47%), Gaps = 16/295 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K IGTR S LA+ A + L + + + T+GD I + L ++ G Sbjct: 1 MNRK-LIIGTRGSQLAMWQANHIKDRLAAA----GIDSELKVIKTQGDIIQHLRLDKLEG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----Q 116 KG FT+E+E++L+S ID AVHS KD+PT GL I+A RE ++ I + Sbjct: 56 KGFFTKELEEELLSSTIDLAVHSHKDLPTVNPPGLIIAAVSERESPAELLIVLKDCVDIK 115 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L ++ +GTSS RRKA LL R D+ D RG ++TR+ KL + AI+LA AG+ Sbjct: 116 KRLSLKHNATVGTSSNRRKAQLLSLRPDLEFDDLRGNLQTRIQKLRDENYDAIILAKAGV 175 Query: 177 KR--LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 +R + E + + P+P QG + I+ ++ + E ++VI++++ + + ER Sbjct: 176 ERIDMDLSDFYVEEIPPVELIPAPAQGVLAIQIRESDQELFEALQVIHNKEVAEVIAVER 235 Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLA-----SDGKIFHEVSRNGNRCD 284 L D C + + + + V D S G + Sbjct: 236 KVLNLFDAGCHAPLGCYCRKSEGKYEAWTSVAETSDEFPDRLYIQRDSTEGMAEE 290 >gi|226478112|emb|CAX72749.1| hydroxymethylbilane synthase [Schistosoma japonicum] Length = 413 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 93/301 (30%), Positives = 145/301 (48%), Gaps = 27/301 (8%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + R+G+R S LAL S L P ++ ++T GD I + L++IG K Sbjct: 6 SQHAVRVGSRRSNLALLQTEMAISLLKVQK--PHIMFEVVEIATVGDEILDVPLSKIGDK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSL 118 LFT+E+EK L+ GE+D VHS KD+P+ L GL + R DV + + L Sbjct: 64 SLFTKELEKSLLVGEVDLVVHSLKDVPSVLPTGLVLGCVFGRSSPEDVVLMAPHNRGMKL 123 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-------------- 164 DL + + +GTSS+RR A L+R + I RG + TRL KL+ Sbjct: 124 SDLPVGATVGTSSIRRVATLIRKYPHLKFISIRGNLNTRLAKLDTPSNLQKQCCTGNQSL 183 Query: 165 KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224 A++LA AG++R+ I ++L+ D + QGA+ E NN +L+ +I+ E Sbjct: 184 SYDALILAKAGVERMGWVDRIDQVLS--DSFYAVSQGALACECLQNNTFIMDLLSLIHDE 241 Query: 225 DTWDSVNCERAFLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSR 278 + + ER+ + +LDG C I+ + K S L + +L+ DG E S Sbjct: 242 SSALTAIAERSLMHQLDGGCSIPISVRSDLTLKEDFKSSKLTLHANILSVDGVKSVERSA 301 Query: 279 N 279 + Sbjct: 302 S 302 >gi|254796754|ref|YP_003081590.1| porphobilinogen deaminase [Neorickettsia risticii str. Illinois] gi|254589999|gb|ACT69361.1| porphobilinogen deaminase [Neorickettsia risticii str. Illinois] Length = 286 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 105/294 (35%), Positives = 159/294 (54%), Gaps = 11/294 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++G RCS LALA A +L I ++ + T GD +++ LTE+GGK LF Sbjct: 4 LKVGARCSTLALAQARLVERALAPY----CERIDLVGVRTSGDILSDIPLTEVGGKALFL 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+KL++GEID AVHS KD+P L++ L R DVF+S ++ L + Sbjct: 60 KELEEKLLTGEIDIAVHSMKDVPAFYHDDLEVVPVLKRAIPNDVFVSFRYPNMLSLPSGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGT + RR L + VI RG I TR+ K N I+LA+ G++RL K+I Sbjct: 120 VIGTCAPRRVVQLNQRF---RVIPLRGNIATRVEKAKN--LDGIILAFCGLERLGLCKMI 174 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+++ + P QGA+C+E + +EL+ I+ +T ERAFL E++G CK Sbjct: 175 SEVIHEDVMLPGVAQGALCVEFRKKDHFLRELILNISDRETIICTTAERAFLEEINGDCK 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +A+ A K +TLYF G++ + + S G+ +A IGR AA + + Sbjct: 235 TALGALAVVKNNTLYFTGMLGKDNRPCYFRTS--GSCLNAKQIGRSAALALLRM 286 >gi|56552799|ref|YP_163638.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis ZM4] gi|260753474|ref|YP_003226367.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|56544373|gb|AAV90527.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis ZM4] gi|258552837|gb|ACV75783.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 308 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 111/301 (36%), Positives = 157/301 (52%), Gaps = 9/301 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 PFR+G+R SPLAL A S+L H +VI+P+ T GD+ ++ L +IGGK L+ Sbjct: 4 PFRLGSRGSPLALIQARSVASALCAAHSWSEDAVVIVPIRTSGDKNRHQALADIGGKALW 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E++ L +G+ID AVHS KD+ T + I+A LPRED+ D I SL+ L Sbjct: 64 TKELDIALTTGQIDAAVHSMKDVETFRPSHISIAAMLPREDVHDRLIGIP--SLEVLPYS 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +GT+S RR A + R R DI + RG I+TRL KL N + A LLA AG+ RL + V Sbjct: 122 GCVGTASPRRAAQIRRIRPDIEIKLLRGNIDTRLEKLANKQFDATLLAAAGLIRLGRNDV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + ++ P+ GQGAI IE + A E V +I+H T +V ER L L+ C Sbjct: 182 GY-DVPLDQMLPAAGQGAIGIEALA-DSAAWEKVSIIDHYPTHLAVQSERQLLLRLNADC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN-RCDAINIGRDAAQYIRFISNKN 303 S IA FA + + +GK + + + DA +G + S Sbjct: 240 HSPIAVFAEILEKNIRLRACLYTENGKFSASIDKEISQPSDAFEVG----SLLLNQSPPE 295 Query: 304 V 304 V Sbjct: 296 V 296 >gi|126460312|ref|YP_001056590.1| porphobilinogen deaminase [Pyrobaculum calidifontis JCM 11548] gi|158513494|sp|A3MWV7|HEM3_PYRCJ RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|126250033|gb|ABO09124.1| porphobilinogen deaminase [Pyrobaculum calidifontis JCM 11548] Length = 296 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 91/297 (30%), Positives = 141/297 (47%), Gaps = 8/297 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+ TR S L+L E + V P ++ + T GD + +R L +IG KG+F Sbjct: 2 KIRVATRGSKLSLLQTQELLDQVKAVE--PKVEFELVVVKTTGDVVQDRPLYQIGVKGIF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ ++ GE D AVHS KD+P++L GL I+ + R DV S SL L Sbjct: 60 EKEVNLAVLRGEADVAVHSLKDLPSELTPGLVIAGFSRRAPPYDVVASREGYSLYTLPKG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL-KKEK 183 +V+GTSS+RR L R D+ V RG ++TR+ K+ + + A ++A AG+ RL E Sbjct: 120 AVVGTSSVRRAEFLRAVRPDVEVRPLRGNVDTRVGKILSGQYDAAIMAMAGLVRLYGWEA 179 Query: 184 VIK-EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +K + E+ PP PGQG + ++++ + ER FL + Sbjct: 180 PVKLSPIRPEEIPPPPGQGIVVAVVKEGEAWLIDILRRASDRRAAVEATAEREFLMHVGA 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 C A+ G A + + F + G + + G D +GR AA+ IR I Sbjct: 240 GCHVAVGGLARYEDGGMSFVAGYAS--GGRRYVIKLWG--EDPREVGRRAAEEIRKI 292 >gi|289705146|ref|ZP_06501550.1| hydroxymethylbilane synthase [Micrococcus luteus SK58] gi|289558174|gb|EFD51461.1| hydroxymethylbilane synthase [Micrococcus luteus SK58] Length = 377 Score = 268 bits (686), Expect = 8e-70, Method: Composition-based stats. Identities = 89/356 (25%), Positives = 145/356 (40%), Gaps = 63/356 (17%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA +L + ++ + T+GD +T +L +GG G+F Sbjct: 3 PLRIGTRGSALATTQTTHVAEALTERS---GLAHELVVIRTEGD-VTTGSLASLGGTGVF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + ++ G +D AVHS KD+P + L+I+A R D+RD + +L L Sbjct: 59 ASALRAAVLDGAVDAAVHSLKDLPAAQPETLEIAAVPARADLRDALCARDGLTLATLPEG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------------NKAHA 168 + +GT S RR A L R D+ ++D RG ++TRL ++ A Sbjct: 119 ARVGTGSPRRVAQLKALRPDLELVDIRGNVQTRLARVPGLEQHDDHAPAAAGSPRGDLDA 178 Query: 169 ILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNP---------------K 213 ++LA AG+ RL + VI E ++ E P+PGQGA+ +E + + Sbjct: 179 VILACAGLDRLGLDHVITERIDPEVMVPAPGQGALAVEIRAEDESFLGRALLDPQAPVGR 238 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLAS 268 +++++ DT +V ERA L L+ C + I A + +V A Sbjct: 239 LHAALELVDDRDTHVAVTAERALLRRLEAGCAAPIGAVARVSDGEAGAPRIEMTAMVAAL 298 Query: 269 DGKIFHEVSRN-----------GNRC------------DAINIGRDAAQYIRFISN 301 DG + + G+ A +G A+ Sbjct: 299 DGSRVLRRTSSVQLDPVPADVAGDPAAADEWLEDTLFVAAEALGVHVAEQFVAEGA 354 >gi|330507063|ref|YP_004383491.1| porphobilinogen deaminase [Methanosaeta concilii GP-6] gi|328927871|gb|AEB67673.1| porphobilinogen deaminase [Methanosaeta concilii GP-6] Length = 305 Score = 268 bits (686), Expect = 8e-70, Method: Composition-based stats. Identities = 88/301 (29%), Positives = 150/301 (49%), Gaps = 9/301 (2%) Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 GTR SPLAL + L + + + T GD ++ L ++ G G+F EI Sbjct: 2 GTRGSPLALRQTQIVQERLKGL----GIQTQLCRVKTSGDVFLDKPLHQLTGFGVFVAEI 57 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSLKDLALHSV 126 +++++SG+ID AVHS KD+PTK + L +SA L R+ DV + +S+++L + Sbjct: 58 DERMLSGKIDLAVHSMKDLPTKRPEELIVSAVLKRDSPYDVLLCREKSVKSIEELDQGAR 117 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSS+RR A LLR R D++++ RG ++TRL+KL AI+LA AG++R+ Sbjct: 118 VGTSSMRRMAQLLRARPDLNILSLRGNLQTRLSKLERGDYDAIVLAEAGLERMGY-HPDY 176 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ E F PS QG I + + +A+ + ++ ER + + G C Sbjct: 177 VRLDGERFVPSANQGTIIVVAKAGS-EAEACSRALDDAHARSETMIERKIMETVGGGCVV 235 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN-RCDAINIGRDAAQYIRFISNKNVF 305 +A A + VL+ DGK F + + + + + D + + + + + Sbjct: 236 PMAVHALVQKGEARVLAEVLSPDGKRFVRLEERISLVQNHLAVAEDMGERLMRMGGRELV 295 Query: 306 N 306 + Sbjct: 296 D 296 >gi|323358316|ref|YP_004224712.1| porphobilinogen deaminase [Microbacterium testaceum StLB037] gi|323274687|dbj|BAJ74832.1| porphobilinogen deaminase [Microbacterium testaceum StLB037] Length = 372 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 86/278 (30%), Positives = 143/278 (51%), Gaps = 7/278 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LALA + ++ + ++P+ ++GD +L+++GG+G+F Sbjct: 4 PLRLGTRRSALALAQSQMVADAVAAAS---GREVELVPIVSEGDVNR-ASLSQLGGRGVF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L +G D VHS KD+PT +GL I+A PRED RDV I+ L L Sbjct: 60 ANGLREALAAGRCDFLVHSLKDLPTAQPEGLVIAATPPREDARDVVITRDGTPLHALEAG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK--KE 182 + +GT S RR A LR + + D RG +++RL ++ + + A++LA AG+ RL Sbjct: 120 ARVGTGSPRRIAQALRHNPRLDIRDIRGNVDSRLARVRDGELDAVILAAAGLSRLGGELG 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + E L + ++P +PGQG++ +ET + + + ++ E T ++ ER L+ LD Sbjct: 180 GLQSEPLGLAEWPTAPGQGSLAVETRTDIDADILAALSALDDEVTRAAITAERTVLSVLD 239 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 C + + A L +V A DG + R Sbjct: 240 AGCHAPVGTHASIVDGDLRLRAVVYALDGAHRIGIDRT 277 >gi|88608800|ref|YP_506274.1| putative porphobilinogen deaminase [Neorickettsia sennetsu str. Miyayama] gi|88600969|gb|ABD46437.1| putative porphobilinogen deaminase [Neorickettsia sennetsu str. Miyayama] Length = 286 Score = 268 bits (685), Expect = 9e-70, Method: Composition-based stats. Identities = 101/294 (34%), Positives = 156/294 (53%), Gaps = 11/294 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++GTRCSPLAL A +L ++ + T GD +++ LTE+GGK LF Sbjct: 4 LKVGTRCSPLALIQARLVERALAPYCA----RTDLVEVKTSGDIVSDVPLTEVGGKALFL 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+KL++GEID AVHS KD+P L++ L R DVF+S ++ L + Sbjct: 60 KELEEKLLTGEIDIAVHSMKDVPAFYHDDLEVVPVLKRAIPNDVFVSFRYPNMLSLPNGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGT + RR L + VI RG I TR+ K N I+LA+ ++RL ++I Sbjct: 120 VIGTCAPRRVVQLNQRF---RVIPLRGNIATRIEKAKN--LDGIILAFCALERLGLRRMI 174 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+++ P QGA+C+E + +EL+ I+ +T ERAFL E++G CK Sbjct: 175 SEVIHENVMLPGVAQGALCVEFRKKDRFLRELILNISDRETIICTAAERAFLEEINGDCK 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +A+ A K + LYF G++ + + S G+ +A +GR AA + + Sbjct: 235 TALGALAIVKNNILYFTGMLAKDNRPRYFRTS--GSCLNAKQVGRRAALALLRM 286 >gi|116671313|ref|YP_832246.1| porphobilinogen deaminase [Arthrobacter sp. FB24] gi|116611422|gb|ABK04146.1| hydroxymethylbilane synthase [Arthrobacter sp. FB24] Length = 332 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 92/300 (30%), Positives = 144/300 (48%), Gaps = 30/300 (10%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL +T L + P + ++ + T GD + +L+++GG G+F Sbjct: 2 TVRIGTRASKLALTQTQQTADQLAAIGGFP---VELVHIRTDGD-VLTGSLSQMGGTGVF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L+ + D AVHS KD+PT GL ++A R D+RDV + L DL Sbjct: 58 VAALREALLRDDCDVAVHSLKDLPTGAAPGLNLAATPKRVDVRDVLCARDGFKLADLPQG 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--------------NNKAHAIL 170 + +GT S RR A L R D+ V+D RG ++TRL ++ + A++ Sbjct: 118 ARVGTGSPRRAAQLRAARPDLDVVDIRGNVDTRLGRVPGLPGNTTDAVVLGKSCDLDAVV 177 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNP------------KAQELV 218 LA AG++R+ + + E L + P+ GQG++ IE + + + Sbjct: 178 LAAAGLERIGRLDTVSEYLETDVMLPAAGQGSLAIECRTADAPRRTGSTEGSQGPLAQAL 237 Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR 278 ++ DT +V ERA LA L+ C + + +A+ KGS LY V A DG R Sbjct: 238 AALDDTDTRLAVTAERALLARLEAGCAAPVGAYAFRKGSMLYLEAAVCAVDGSATVRDKR 297 >gi|313901219|ref|ZP_07834707.1| hydroxymethylbilane synthase [Clostridium sp. HGF2] gi|312954177|gb|EFR35857.1| hydroxymethylbilane synthase [Clostridium sp. HGF2] Length = 299 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 107/277 (38%), Positives = 153/277 (55%), Gaps = 2/277 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LALA E ++ L + P H+ I ++TKGDRI + L ++ KG+F Sbjct: 3 IRMGTRGSALALAQCNEVKALLEKAY--PQHSFEICVITTKGDRIQHVALDQMKDKGIFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE++L+ ID AVHS KDMP+ L + L + L RED RDV + A SL+ L LH+ Sbjct: 61 KEIEQQLLEHTIDLAVHSMKDMPSVLDERLCFTETLLREDARDVLVLRNAASLESLPLHA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 I T S RR+ LLR R D+ ++ RG IETRL KL + + I+LA AG+KRL+ + I Sbjct: 121 RIATGSKRRRFQLLRQREDLEIVGIRGNIETRLKKLEDQQLDGIVLAAAGLKRLQLAQYI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L P+ QGAI IE H ELV + + + V ERAFL EL+G C Sbjct: 181 TQTLPEHIMVPAVAQGAIAIEVHKKRNDLVELVNALCTKRVDEEVCAERAFLQELNGGCH 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 + + + + + + DG ++ +G R Sbjct: 241 TPLGARCILHEADAELFAVYGSEDGTRLFDLHVSGPR 277 >gi|83282130|ref|XP_729634.1| porphobilinogen deaminase [Plasmodium yoelii yoelii str. 17XNL] gi|23488022|gb|EAA21199.1| porphobilinogen deaminase, putative [Plasmodium yoelii yoelii] Length = 583 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 101/341 (29%), Positives = 170/341 (49%), Gaps = 41/341 (12%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIG 59 K IGTR SPLA+ + + + L+ K N+++ P+ T GD+I ++T+ G Sbjct: 69 ATKEIIIGTRNSPLAIKQSEKVKKKLLTYFKKINENINVILKPIKTTGDKILDKTVGSFG 128 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKG+FT+E++++LI +D VHS KD+PT L + +S +L R+ I D F+S ++L+ Sbjct: 129 GKGIFTKELDEELIKNNVDICVHSLKDIPTVLPDNIHLSCFLKRDTINDAFLSIKYKNLR 188 Query: 120 DLALHS-----------VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA 168 D+ L S I TSSLRR + + ++ + RG I TR+ KL NN + Sbjct: 189 DINLSSHVIDKEIDLPRTIATSSLRRTSQIRYKYKNLKLKFIRGNINTRIAKLFNNSFDS 248 Query: 169 ILLAYAGIKRL----------------------------KKEKVIKEILNIEDFPPSPGQ 200 I++A+ G++RL + + LN P+ Q Sbjct: 249 IIIAFCGLERLVSKKILRQIMKNNIKDKSYIINYKNISIDLRHLNIQKLNTNIMCPALCQ 308 Query: 201 GAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY 260 G I + ++ NNP+ +++K IN+E + N ERAFL ++DGSC I G+ + ++ Sbjct: 309 GIIGVTSNKNNPEISQILKNINNEKSQIMANIERAFLQKIDGSCTMPIGGYTKFSKNKIF 368 Query: 261 FYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 F I+ +G +++ + D I +AA+ I+ Sbjct: 369 FNAIINDINGLENYKIKVVRHLNDLDGIADEAAEKIKEKIG 409 >gi|225389494|ref|ZP_03759218.1| hypothetical protein CLOSTASPAR_03242 [Clostridium asparagiforme DSM 15981] gi|225044437|gb|EEG54683.1| hypothetical protein CLOSTASPAR_03242 [Clostridium asparagiforme DSM 15981] Length = 301 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 101/301 (33%), Positives = 155/301 (51%), Gaps = 15/301 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA+ +SL + P + + T GD+I N+ L E GGKG+F Sbjct: 4 TIRIGTRNSRLAMIQTEMVAASLREA--APGIQVSLEARMTTGDKILNKPLQEFGGKGVF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 E E+ ++ G +D AVHSAKDMP +L +GL I RED RDV ++ + + Sbjct: 62 VSEFEEGILEGRLDLAVHSAKDMPMELAEGLSIVGVPMREDPRDVLVTAAGRPVPKTGE- 120 Query: 125 SVIGTSSLRRKALLLRWRSD------ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 VIGTSS RRK + ++ + + RG ++TRL KL + H I+LA AG+KR Sbjct: 121 IVIGTSSPRRKLQIELLGTNLWPGGSVRCENLRGNVQTRLGKLESGMYHGIILAAAGLKR 180 Query: 179 LKKEKVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 L + + + L E F P+ GQG + +E +A ++ I+H +TW +N ER Sbjct: 181 LGLLEDPRYNFQFLECESFVPAGGQGILAVEGRAEG-RAAGILSGISHRETWLCLNLERQ 239 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 L LD C I ++ + L +GI +G+++ ++ G +A + R AA+ Sbjct: 240 VLKLLDAGCHEPIGVYSRLEDGLLEVFGISGR-NGRVY-KIHLKGQPEEAGELARRAAEG 297 Query: 296 I 296 + Sbjct: 298 L 298 >gi|295395608|ref|ZP_06805802.1| exopolyphosphatase [Brevibacterium mcbrellneri ATCC 49030] gi|294971627|gb|EFG47508.1| exopolyphosphatase [Brevibacterium mcbrellneri ATCC 49030] Length = 821 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 86/305 (28%), Positives = 143/305 (46%), Gaps = 13/305 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LA + + + + I+ + T+GD L +GG G Sbjct: 498 TRTVRLGTRRSNLARSQSVGVAQDIAAHTGW---RVEIVEVVTEGDVNM-TPLANMGGTG 553 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F + + L+SG+ID AVHS KD+PT G+ ++A PR D DV ++ + L Sbjct: 554 VFVSAVRQALLSGKIDIAVHSLKDLPTAQAPGITLAAVPPRVDPSDVLVARDGLTFDTLP 613 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GT S RR A + R D+ + RG ++TR+ + + + A++LA AG++RL + Sbjct: 614 QGAVVGTGSPRRAAQMRAARPDLDIRGVRGNVDTRIKYVTDGRLDAVVLAAAGMRRLGRL 673 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVN-------NPKAQELVKVINHEDTWDSVNCERA 235 + + L E P+PGQGA+ IE + K + + I+ E T+ +V ERA Sbjct: 674 AEVSQTLTTELMLPAPGQGALAIECRAENADREPFDAKLRSGLLAIHDETTYRAVVAERA 733 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCDAINIGRDAA 293 L+ C + I A ++ ++ GK N AI++G A Sbjct: 734 ILSRAQAGCSAPIGALANVTERSIELSAVMADDAGKLARITRSVANTGVNAAIDVGTQIA 793 Query: 294 QYIRF 298 + Sbjct: 794 DELLD 798 >gi|269958021|ref|YP_003327810.1| porphobilinogen deaminase [Xylanimonas cellulosilytica DSM 15894] gi|269306702|gb|ACZ32252.1| porphobilinogen deaminase [Xylanimonas cellulosilytica DSM 15894] Length = 343 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 88/313 (28%), Positives = 142/313 (45%), Gaps = 18/313 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA + L ++ P + ++ + T GD + +L +GG G+F Sbjct: 7 PLRLGTRASLLATTQSGLVAKRLEELTGRP---VELVHIRTDGD-VLTGSLASLGGTGVF 62 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L+ D AVHS KD+PT ++GL RED RD + +L L Sbjct: 63 VAALREALLDDRCDVAVHSLKDLPTAAVEGLTF-VTPEREDPRDALCARDGLTLDTLPRG 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRLKKE 182 + IGT S RR A L R D+ V+D RG ++TRL + + A++LA +G+ RL + Sbjct: 122 ARIGTGSPRRAAQLRAARPDLDVVDIRGNVDTRLKRALGPDADLDAVVLACSGLARLGRT 181 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPK----AQELVKVINHEDTWDSVNCERAFLA 238 + + L+ P+PGQGA+ +E + ++H T SV ERA LA Sbjct: 182 DTVTQALDPAVVAPAPGQGALAVEARTTDLAPGGPLAAAFAALDHRATRLSVTAERAVLA 241 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE-------VSRNGNRCDAINIGRD 291 L+ C + + A L +V DG + +G+ A ++G Sbjct: 242 RLEAGCAAPVGALARVDEGQLTLTAVVARVDGTEKLRHRASVALGAISGDDDAARDLGVR 301 Query: 292 AAQYIRFISNKNV 304 A+ + ++ Sbjct: 302 VAEALLADGAADL 314 >gi|148253694|ref|YP_001238279.1| hydroxymethylbilane synthase [Bradyrhizobium sp. BTAi1] gi|146405867|gb|ABQ34373.1| hydroxymethylbilane synthase [Bradyrhizobium sp. BTAi1] Length = 325 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 97/324 (29%), Positives = 141/324 (43%), Gaps = 22/324 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + FRIGTR S +ALA E L IP +I I+ T GD L GG Sbjct: 1 MTR--FRIGTRKSTMALAQTEEIARRLQAA--IPSLDIEIVKFETTGDSDQTSKLLTHGG 56 Query: 61 KG-LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSL 118 KG F EI + ++ G + A+HS KDMP + GL I+A L R+ DV + SL Sbjct: 57 KGGAFVAEIRRAMLDGRLHAAMHSLKDMPGNEETPGLVIAALLSRDPPGDVLVLRRGLSL 116 Query: 119 KDLAL----HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--------- 165 + IGT+++RR A R +I FRG +TR+ KL+N + Sbjct: 117 DEFRKDGGRGFKIGTNAVRRAAYARRLFPQAELIHFRGAADTRIRKLDNGELQRLPDGGA 176 Query: 166 ---AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 A A+++A +G++R+ D P+ GQG + +E + + + ++ I+ Sbjct: 177 VGPADALIMARSGLERVGLSDRASFDFAAADMLPAVGQGIVAVECPSLDWETRRILATID 236 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 + ER L L+G C S IAGFA G + VL DG F E R G Sbjct: 237 DGAARSCADAEREVLWVLNGHCNSPIAGFATIDGDQMTLTASVLDEDGGRFIEAQRAGPA 296 Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306 +GR + + Sbjct: 297 DRPRELGRTVGLELLANGAAELIE 320 >gi|225561829|gb|EEH10109.1| porphobilinogen deaminase [Ajellomyces capsulatus G186AR] Length = 345 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 98/319 (30%), Positives = 146/319 (45%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K F IGTR S LAL R +L P + I+ D L E K Sbjct: 17 TKTTFTIGTRKSKLALVQTDLVRDALKAA--WPQYEFDILTKDAAADLDKVTPLREFTSK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118 L+TEE+E+ L++ +ID VHS KD+PT++ + A +PRED RDV + +L Sbjct: 75 NLWTEELEELLLAKQIDLVVHSLKDVPTQIPTTCILGAMMPREDPRDVLVIKKGLPNMTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGI 176 +L S++GTSS+RR A L R + D RG I+TRL KL + A++LA AG+ Sbjct: 135 AELPAGSIVGTSSVRRIAQLSRHYPHLIAKDVRGNIDTRLTKLDAQDGPFSALILAAAGL 194 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R + I L+ +D + GQG + IE N+ + +E+V+ I T + ER Sbjct: 195 LRTGQGARISHYLDSKDGKMLHAVGQGGLGIEIRANDERMKEMVEKIGDRKTTFACLAER 254 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 L L+G C + + TL IV + DGK E+ + +A Sbjct: 255 NLLRTLEGGCSAPLGVETEWVQGAEGKETLMLRAIVSSVDGKEAVEIEKVEKVTSGEEAE 314 Query: 287 NIGRDAAQYIRFISNKNVF 305 G+ A + + + Sbjct: 315 VFGKKVADELVVLGAGRIL 333 >gi|119963156|ref|YP_948463.1| porphobilinogen deaminase [Arthrobacter aurescens TC1] gi|119950015|gb|ABM08926.1| porphobilinogen deaminase [Arthrobacter aurescens TC1] Length = 332 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 30/300 (10%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL +T L V P + ++ + T+GD + +L+++GG G+F Sbjct: 2 TVRIGTRASKLALTQTQQTADQLAAVGGFP---VELVHIKTEGD-VKTGSLSQMGGTGVF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L++ D AVHS KD+PT GL I+A R D+RDV + +L L Sbjct: 58 VAALRDALLADACDVAVHSLKDLPTGAALGLSIAATPKRVDVRDVLCARDGMTLAQLPGG 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--------------NNKAHAIL 170 + +GT S RR A L R DI V+D RG ++TRL ++ + A++ Sbjct: 118 AKVGTGSPRRAAQLRAARPDIEVLDIRGNVDTRLGRVPGLPGNTTDEVVQGKSCDLDAVV 177 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK------------AQELV 218 LA AG++R+ + + E + P+PGQGA+ IE + + + Sbjct: 178 LAAAGLERMDRLDTVSEFFESDVMLPAPGQGALAIECRTEDAPSVAGSAEGADGVLAQAL 237 Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR 278 +N DT +V ERA LA L+ C + + +A+ KGS L+ +V A DG + Sbjct: 238 AALNDHDTRLAVTAERAVLARLEAGCAAPVGAYAFRKGSMLHLEAVVCAVDGTKTVREKK 297 >gi|115523326|ref|YP_780237.1| porphobilinogen deaminase [Rhodopseudomonas palustris BisA53] gi|115517273|gb|ABJ05257.1| hydroxymethylbilane synthase [Rhodopseudomonas palustris BisA53] Length = 326 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 93/320 (29%), Positives = 149/320 (46%), Gaps = 20/320 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-L 63 P RIGTR S +ALA + L ++ I+ T GD L GGKG Sbjct: 4 PVRIGTRKSVMALAQTEDIARRLSAAAS--ELDVEIVKFETVGDSDQVSKLLPHGGKGGA 61 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 F EI +I+G+++ +HS KDMP + GL I A L R+ D + +L +L Sbjct: 62 FVAEIRAAVIAGKLEACMHSLKDMPGNEDTPGLIIGATLSRDPATDALVLRKGLTLDELK 121 Query: 123 L----HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK------------A 166 IGT+++RR A R ++++I FRG +TR+ KL+N + A Sbjct: 122 KSRGKGYTIGTNAVRRAAYAKRLFPEVNIIHFRGAADTRIRKLDNGEMQRLPGGGEVGPA 181 Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226 A+++A +G++R+ I ++ PS GQG + +E +N+ + ++ + +I+ Sbjct: 182 DALIMARSGLERVGFVDRIVHDFTPQEMLPSAGQGIVAVECAINDWQIRKYLAMIDDPVA 241 Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286 S + ER L L+G C S +A F+ GS + VL G +F E SR+G Sbjct: 242 RLSCDAEREVLWVLNGHCNSPMAAFSTINGSDMTLSASVLDETGGLFIEASRSGPANRPR 301 Query: 287 NIGRDAAQYIRFISNKNVFN 306 +GR A + + Sbjct: 302 ELGRAVALDLLNKGAAAIIE 321 >gi|150398808|ref|YP_001322575.1| porphobilinogen deaminase [Methanococcus vannielii SB] gi|150011511|gb|ABR53963.1| porphobilinogen deaminase [Methanococcus vannielii SB] Length = 304 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 91/311 (29%), Positives = 148/311 (47%), Gaps = 16/311 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA+ S L ++ II + T GD+ N+ L ++G G+F Sbjct: 2 KLRIGTRGSKLAMIQTKYIASLLNEL----GVETEIIIIKTTGDKDQNKKLADLG-IGVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E++ K++ EID AVHS KD+PT LQI+A RE D+ + + + Sbjct: 57 TKELDNKMLENEIDIAVHSLKDVPTLWSDELQITATPKRESPDDLILWNKNSNFNIEYDE 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 ++GTSS+RR A L ++ V RG + TR++KL NN+ I++A AG+ R + Sbjct: 117 LIVGTSSIRRTAFLELSNPNLKVKLLRGNVATRIDKLRNNEYDGIIMAKAGLIRQGIDLS 176 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 +E P+P QG I + + + + E+++ IN + T+ ER L E G C Sbjct: 177 DFNYEKLEI-LPAPAQGVIGVASRKKDYEINEILEKINDKKTYLEAVAERWSLKEYGGGC 235 Query: 245 KSAIAGFAYC--KGSTLYFYG-IVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYI- 296 ++ FA+ L +V GK +S+ G N D + + +D + + Sbjct: 236 QAPFGAFAFYDFDEGILTLKCDLVKEIHGKK-ISISKEGFVYCNVND-VELSKDLGKRVG 293 Query: 297 RFISNKNVFNF 307 ++F Sbjct: 294 LSFKESDIFEI 304 >gi|296394051|ref|YP_003658935.1| porphobilinogen deaminase [Segniliparus rotundus DSM 44985] gi|296181198|gb|ADG98104.1| porphobilinogen deaminase [Segniliparus rotundus DSM 44985] Length = 308 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 97/311 (31%), Positives = 153/311 (49%), Gaps = 16/311 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA A R ++ + + ++ ++T GD+ ++ +TEIG G+FT Sbjct: 2 IRVGTRGSLLATTQAATVRDAIRSL----GESAELVIVATVGDK-SSGPITEIG-VGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + LI+GEID AVHS KD+PT + A R D DV +S + L +L S Sbjct: 56 SALRDALIAGEIDIAVHSLKDLPTAQDPRFSLVAVPERADPSDVLVSRSGLPLAELPPGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT + RR A L R+D+ + RG ++TR+ K+ + AI++A AG+ RL +E+ Sbjct: 116 TVGTGAPRRAAQLRLARADLEIQPIRGNLDTRMRKVATAECDAIVVARAGLLRLGREQEA 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPK-AQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E+L+ P+PGQGA+ +E + P E + ++HE + + ERA LAEL C Sbjct: 176 TEVLHPAVMLPAPGQGALAVECRSDAPASLTETLAKLDHEHSRAASAAERAVLAELSAGC 235 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---------CDAINIGRDAAQY 295 + A G TL V+A DG + A+ +GR A+ Sbjct: 236 SGPVGALARMTGQTLRVEASVIAIDGSRSVRAHAETSVLGTELLSQEQHAVALGRRVAES 295 Query: 296 IRFISNKNVFN 306 +R + + Sbjct: 296 LRSMGAMELIG 306 >gi|239918007|ref|YP_002957565.1| hydroxymethylbilane synthase [Micrococcus luteus NCTC 2665] gi|259646260|sp|C5CB88|HEM3_MICLC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|239839214|gb|ACS31011.1| hydroxymethylbilane synthase [Micrococcus luteus NCTC 2665] Length = 377 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 89/356 (25%), Positives = 144/356 (40%), Gaps = 63/356 (17%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA +L ++ + T+GD +T +L +GG G+F Sbjct: 3 PLRIGTRGSALATTQTSHVAEALTARS---GLAHELVVIRTEGD-VTTGSLASLGGTGVF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + ++ G +D AVHS KD+P + L+I+A R D+RD + +L L Sbjct: 59 ASALRAAVLDGVVDAAVHSLKDLPAAQPETLEIAAVPARADLRDALCARDGLTLATLPEG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------------NKAHA 168 + +GT S RR A L R D+ ++D RG ++TRL ++ A Sbjct: 119 ARVGTGSPRRVAQLKALRPDLELVDIRGNVQTRLARVPGLEQHDDHAPAAVGSPRGDLDA 178 Query: 169 ILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNP---------------K 213 ++LA AG+ RL + VI E ++ E P+PGQGA+ +E + + Sbjct: 179 VILACAGLDRLGLDHVITERIDPEVMVPAPGQGALAMEIRAEDESFLGRALLDPEAPVGR 238 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLAS 268 +++++ DT +V ERA L L+ C + I A + +V A Sbjct: 239 LHAALELVDDRDTHVAVTAERALLRRLEAGCAAPIGAVARVGDGEAGAPRIEMTAMVAAL 298 Query: 269 DGKIFHEVSRN-----------GNRC------------DAINIGRDAAQYIRFISN 301 DG + + G+ A +G A+ Sbjct: 299 DGSRVLRRTSSVQLDPVPADVVGDPAAADEWLEDTLFVAAEALGVHVAEQFVAEGA 354 >gi|311896763|dbj|BAJ29171.1| putative porphobilinogen deaminase [Kitasatospora setae KM-6054] Length = 318 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 94/286 (32%), Positives = 149/286 (52%), Gaps = 15/286 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + V I + ++ ++T GD ++ +L IGG G+F Sbjct: 3 PLRLGTRRSALAMAQSGMVA---EAVAGITGRRVELVEITTYGD-VSRESLARIGGTGVF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L+ G ID AVHS KD+PT GL ++A RED RD ++ +L +L Sbjct: 59 VSALRDALLEGRIDLAVHSLKDLPTAAPAGLLLAAVPEREDARDALVARDGLTLAELVGK 118 Query: 125 S-----VIGTSSLRRKALL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 S +GT S RR A L +++ + RG ++TR+ + + + A++LA AG Sbjct: 119 STGRAVRVGTGSPRRMAQLNAWARARGAELETVAIRGNVDTRIGFVASGELDAVVLATAG 178 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + RL + I E L+ E P+PGQGA+ +E +P ++ ++H T +V ERA Sbjct: 179 LNRLGRAAEITEHLDTELMLPAPGQGALAVECV--DPTLAAVLARLDHRPTRAAVVAERA 236 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281 LA L+ C + +A A G+ L G+V ++DG ++S NG Sbjct: 237 LLATLEAGCSAPVAALATWAGTELRLDGVVGSTDGTELIKMSANGP 282 >gi|86751126|ref|YP_487622.1| porphobilinogen deaminase [Rhodopseudomonas palustris HaA2] gi|86574154|gb|ABD08711.1| hydroxymethylbilane synthase [Rhodopseudomonas palustris HaA2] Length = 326 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 91/322 (28%), Positives = 145/322 (45%), Gaps = 20/322 (6%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K P RIGTR S +ALA + + L + I+ T GD L GGKG Sbjct: 2 KIPVRIGTRKSVMALAQTEDIANQLRAAAS--ELDPEIVRFETVGDSDQVSKLLPHGGKG 59 Query: 63 -LFTEEIEKKLISGEIDCAVHSAKDMPT-KLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 F EI ++ GE+ CA+HS KDMP + GL ++A L R+ D + +L + Sbjct: 60 GAFVAEIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPANDSMVLRKGLTLDE 119 Query: 121 LA----LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------------N 164 L IGT+++RR A R ++ VI FRG +TR+ KL+N Sbjct: 120 LKASRGKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADTRIRKLDNREKQRMPDGGEVG 179 Query: 165 KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224 A A+++A +G++R+ I ++ P+ GQG + +E V+ + ++ + +I+ Sbjct: 180 PADALIMARSGLERVGFVDRIVHDFTPQEMLPAAGQGIVAVECPVHEWQTRKYLALIDDP 239 Query: 225 DTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284 + ER L L+G C S +A ++ GS + VL G +F E +R G Sbjct: 240 KARLFCDAEREVLWVLNGHCNSPMAAYSTINGSEMTLSASVLDEAGGLFIEATRTGPANR 299 Query: 285 AINIGRDAAQYIRFISNKNVFN 306 +GR + + Sbjct: 300 PRELGRTVGLDLLDKGAAAIIE 321 >gi|299132980|ref|ZP_07026175.1| porphobilinogen deaminase [Afipia sp. 1NLS2] gi|298593117|gb|EFI53317.1| porphobilinogen deaminase [Afipia sp. 1NLS2] Length = 325 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 92/324 (28%), Positives = 144/324 (44%), Gaps = 22/324 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR S +A+A E L V + I+ T GD L+ GG Sbjct: 1 MASDRLRIGTRKSAMAIAQTEEIARRLKAV----GTEVEIVKFETMGDIDQAGKLSPHGG 56 Query: 61 KG-LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSL 118 KG F +I + +++G + A+HS KD+P + GL I A L R+ DV + S+ Sbjct: 57 KGGAFVAQIREAVLNGRLHAAMHSLKDVPGNEDTPGLVIGAALSRDPPGDVLVLRPGTSV 116 Query: 119 KDLA----LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------- 163 +L IGT+S+RR A + R +I VI FRG ++R+ KL+ Sbjct: 117 DELKRTRGKGFEIGTNSVRRAAYVRRLFPEIEVIHFRGAADSRVRKLDQRAKQKLPDGGA 176 Query: 164 -NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 A A+++A +G++R+ + I +I + P+ GQG + +E + + + ++ I+ Sbjct: 177 VGPADALIMARSGLERVGLKSRIAYEFSIAEMLPAVGQGIVAVECAARDFETRYILSAID 236 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 + ER L L+G C S IAGFA G+ + VL G E SR G Sbjct: 237 DASAHACADAEREVLWVLNGHCNSPIAGFAEIMGTEMQLAASVLDHAGSRIIEASRVGCA 296 Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306 +GR + + Sbjct: 297 SRPRELGRAVGMELLARGAAEIIE 320 >gi|327311850|ref|YP_004338747.1| porphobilinogen deaminase [Thermoproteus uzoniensis 768-20] gi|326948329|gb|AEA13435.1| porphobilinogen deaminase [Thermoproteus uzoniensis 768-20] Length = 303 Score = 265 bits (678), Expect = 7e-69, Method: Composition-based stats. Identities = 87/300 (29%), Positives = 141/300 (47%), Gaps = 6/300 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+ TR S L+L S+ +V P I+ + T GD + +R L IG KG+F Sbjct: 2 KLRVATRGSKLSLLQTELFIKSIKEVE--PDLEFEIVVVKTTGDLVQDRPLYAIGVKGVF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ ++ G+ D AVHS KD+P+++ + L ++ Y R+ D S + L Sbjct: 60 EKEVNLAVLRGQADVAVHSLKDLPSEIHEDLVVAGYSKRDSPYDAIASTRGYDVWGLPRG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSS+RR A L R D+ + RG ++TR+ K+ + A +LA AG++RL E Sbjct: 120 ARVGTSSVRRGAFLKSIRPDLHIEPLRGNVDTRIGKVLSGAVDAAVLAEAGVRRLYGENP 179 Query: 185 IKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 EI ++ PP PGQG + ++ +L++ + ERAFL E+ G Sbjct: 180 PVEIRRVKPDEIPPPPGQGIVAAVARKDDRGIIDLLRKASDPRAALEARAERAFLKEMGG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C A+ G A + + F + DG V G +G AA+ ++ Sbjct: 240 GCHVAVGGLATATPNGIEFLAGWASVDGSRKVLVKAFG--ESPEEVGVRAARMLKSALGP 297 >gi|330945628|gb|EGH47118.1| porphobilinogen deaminase [Pseudomonas syringae pv. pisi str. 1704B] Length = 201 Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 82/202 (40%), Positives = 119/202 (58%), Gaps = 2/202 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGA 202 E I ++++D P+ G G Sbjct: 179 FEDRITSAISVDDSLPAGGPGG 200 >gi|299134347|ref|ZP_07027540.1| porphobilinogen deaminase [Afipia sp. 1NLS2] gi|298591094|gb|EFI51296.1| porphobilinogen deaminase [Afipia sp. 1NLS2] Length = 324 Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 91/318 (28%), Positives = 141/318 (44%), Gaps = 20/318 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-LF 64 RIGTR S +ALA E L P + I+ T GD+ L ++GGKG F Sbjct: 1 MRIGTRKSVMALAQTNEIARQLTAA--DPSLAVEIVKFETMGDQDQTGKLLDLGGKGGAF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-- 121 +I + G ++ A+HS KDMP + GL I A L R+ D + +L +L Sbjct: 59 VAQIRDAVREGRLEAAMHSLKDMPGNEDTPGLVIGAMLLRDPPTDALVVRNGVTLDELRR 118 Query: 122 --ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------------NKAH 167 IGT+++RR A + R + +I FRG +TR+ KL+ A Sbjct: 119 SRGKGFKIGTNAVRRAAYVRRLFPEAEIIHFRGAADTRIRKLDGREMQRLPDGGEVGPAD 178 Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227 A+++A AG++R+ I + ++ P+ GQG + +E + + + I++ + Sbjct: 179 ALVMARAGLERVGFADRIVHQFSPDEMLPAVGQGIVAVECAAADWQTLARLAGIDNAVSR 238 Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 ER L L+G C S IAG+A G + VL F EV+R G Sbjct: 239 QCGEAEREVLWVLNGHCNSPIAGYATLDGGEISLKAAVLDEANHHFIEVTRRGPVGRPRE 298 Query: 288 IGRDAAQYIRFISNKNVF 305 +GR A + +V Sbjct: 299 LGRAVAFDLLEKGAADVI 316 >gi|307353670|ref|YP_003894721.1| porphobilinogen deaminase [Methanoplanus petrolearius DSM 11571] gi|307156903|gb|ADN36283.1| porphobilinogen deaminase [Methanoplanus petrolearius DSM 11571] Length = 292 Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 96/293 (32%), Positives = 147/293 (50%), Gaps = 20/293 (6%) Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 GTR S LALA L D+ + +ST GD +TN L ++GG+G+F + + Sbjct: 6 GTRASKLALAQTKRVSRMLYDL----EIETQVKKISTSGDNVTNVPLHKVGGQGIFVKAL 61 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128 + ++ GEID AVHS KD+P K G+ A L R+ D + + L ++G Sbjct: 62 DDAILEGEIDFAVHSMKDIPAKRPDGVVTCAILKRDSPADFLVHY-----CPLKEVKIVG 116 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188 TSS RR+A LR D+ V + RG ++TR+ KL + AI+LA AG++RL + Sbjct: 117 TSSTRRRAQFLRGGLDVEVKELRGNVDTRIRKLKEGEYDAIVLAEAGMERLGL-DLPGTR 175 Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248 L + PSP QG I + ++P+ + + +NHE T + ERA + E+ G C + Sbjct: 176 LLPQWHVPSPNQGIIAVVCR-DDPELIKTFEPLNHEQTRMDASVERAVMEEIGGGCYTPQ 234 Query: 249 AGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG-NRCDAINIGRDAAQYIRFIS 300 F G + VL+ DGK + + +G + +A IG Q +R I Sbjct: 235 GVFCE-DG---FLIAEVLSLDGKRWERIEDDGSSVEEARLIG----QKLRSIG 279 >gi|320106346|ref|YP_004181936.1| porphobilinogen deaminase [Terriglobus saanensis SP1PR4] gi|319924867|gb|ADV81942.1| porphobilinogen deaminase [Terriglobus saanensis SP1PR4] Length = 350 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 97/353 (27%), Positives = 145/353 (41%), Gaps = 60/353 (16%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-------LTEI 58 R+G+R S LAL A +SL + T GDR+ + E+ Sbjct: 3 LRLGSRGSQLALWQANHIAASLRGAGHTTKIT----IIRTTGDRMQDPAYVKENPVTPEM 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 KG+F +EIE+ L+ GEID AVHS KD+PT + ++A R D RD +S L Sbjct: 59 DAKGIFIKEIEEALLRGEIDLAVHSLKDLPTVMDPRFTLAAIPTRADARDALLSPEWVQL 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L + +GT+S RRKA +L R D+ ++ RG I+TRL KL + A++LA AGI R Sbjct: 119 HTLPDGARVGTTSPRRKAQMLAHRPDLQFVEIRGNIDTRLRKLAAGQCDALVLACAGIDR 178 Query: 179 LK--------------------------------KEKVIKEILN------------IEDF 194 L E+ E + Sbjct: 179 LGARLLHPVDLDPAHPEHGRAPHVECVTHADHDHLEEHPTEHEPAGQVDWIRERFAADTM 238 Query: 195 PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254 P+PGQGA+ +ET + P+ V ++ +T +V ER L L G C + + Sbjct: 239 CPAPGQGALGVETLSDAPEVIAAVSALDDAETRYAVEAERWMLHALGGGCSLPVGAWCVD 298 Query: 255 KGSTLYFYGIVLASDGKIFHEVSRNGNRCD-AINIGRDAAQYIRFISNKNVFN 306 K V A+DG + N + A ++G A + + + Sbjct: 299 K----RLTANVTAADGDEMLSSEISANEGESARSLGERVAADLVARGARELLQ 347 >gi|150401746|ref|YP_001325512.1| porphobilinogen deaminase [Methanococcus aeolicus Nankai-3] gi|150014449|gb|ABR56900.1| porphobilinogen deaminase [Methanococcus aeolicus Nankai-3] Length = 342 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 87/304 (28%), Positives = 150/304 (49%), Gaps = 14/304 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IGTR S LAL ++ L ++++ + I+ T GD+ + L+E+G G+F Sbjct: 43 KIIIGTRGSKLALTQTNYIKALLENLNENIDIEVKIV--KTTGDKDQSSKLSELG-LGVF 99 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-----LK 119 T+E++ K+++ EID AVHS KD+PT + L I++ RE D+ + + + Sbjct: 100 TKELDLKMLNNEIDIAVHSLKDVPTVWNENLTIASTPKRESYADLILWNKEDNDINIEKC 159 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 + + ++GTSS+RR+ L ++ RG ++TRLNKL N + AI+LA AG+ RL Sbjct: 160 NEKDNIIVGTSSIRRQEFLKIKYPNLKTKLLRGNVDTRLNKLRNKEYDAIILAEAGLNRL 219 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 K + + P+P QG + + + +N + +++ INH+ T+ ER L E Sbjct: 220 KM-DLSDFNYERLNILPAPAQGVVGVASRTDNKEVISILQKINHKKTFLEALAERYALRE 278 Query: 240 LDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQ 294 G C++ + L V+ + E + N + D A N+G + Sbjct: 279 YGGGCQAPFGALSKYDEENKILNLKCSVVIGNTIKSKEENINCDIMDIEGAKNLGIKIGK 338 Query: 295 YIRF 298 YI+ Sbjct: 339 YIKQ 342 >gi|307195489|gb|EFN77375.1| Porphobilinogen deaminase [Harpegnathos saltator] Length = 313 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 94/301 (31%), Positives = 148/301 (49%), Gaps = 39/301 (12%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 + TKGD+I +++L +IG K LFTEE+E+ L G +D VHS KD+PT L G+ + A L Sbjct: 1 MFTKGDKILDKSLPKIGEKSLFTEELEQALGEGSLDFVVHSLKDLPTILPAGMALGALLK 60 Query: 103 REDIRDVFISHTA---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159 RED RD + ++L L SVIGTSSLRR A L R + V + RG + TRL Sbjct: 61 REDPRDAVVMSKKFKEKTLSTLPKGSVIGTSSLRRTAQLARNLPHLKVENIRGNLNTRLK 120 Query: 160 KLNNNKAHAILLAYA--GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217 KL++ K+ + A G+KR+ + I +I+ E+ + GQGA+ +E ++ + + L Sbjct: 121 KLDDEKSAYAAIVLAAAGLKRIGWKDRISQIMEPEEALYAVGQGALGVECRESDWETRSL 180 Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277 ++ + +T CER+FL L G C + +A + +G L G V + DG+ + + Sbjct: 181 LEPLYDMETTLKCVCERSFLKTLGGGCSAPVAVASSLEGEELKITGAVWSLDGQTLIKDT 240 Query: 278 RNG----NRCD------------------------------AINIGRDAAQYIRFISNKN 303 G + D A +G+D A + + + Sbjct: 241 CKGKLFIPKDDGEPPRKCPYQEPRLYCGVVPGRMNALSLHGAEQLGKDLANNLIEKNAID 300 Query: 304 V 304 V Sbjct: 301 V 301 >gi|124485351|ref|YP_001029967.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Methanocorpusculum labreanum Z] gi|124362892|gb|ABN06700.1| uroporphyrin-III C-methyltransferase [Methanocorpusculum labreanum Z] Length = 542 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 96/308 (31%), Positives = 151/308 (49%), Gaps = 25/308 (8%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LALA + L + + + + T GD++T+R L +IGG Sbjct: 1 MSK--IRIGTRGSKLALAQTKKVIGLLAEN----GIDAEYVIIKTTGDKVTDRGLHQIGG 54 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F E++ ++ GEIDCAVHS KD+P + KGL A L R+ D + + ++D Sbjct: 55 FGMFVRELDNAILRGEIDCAVHSMKDIPAERPKGLLTVAVLKRDPPYDFLVMNG--KVED 112 Query: 121 LALHSVIGTSSLRRKALLLRWR---SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L VIGTSSLRRKA LLR+ + V RG ++TRL KL++ I++A AG+ Sbjct: 113 L---MVIGTSSLRRKAQLLRYFHNCPAVRVEMLRGNLDTRLGKLDDGLYDGIMVAEAGLM 169 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL K L+ + F P+ QG I I + + P+ + +N + ER + Sbjct: 170 RLDY-KRNGVRLSPDMFVPAANQGTIAIVSR-DTPELRAAFAPLNDPQSALDCAIERIVM 227 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-GNRCDAINIGRDAAQYI 296 ++ G C + + F + + VL+ DG ++ G+ A G + Sbjct: 228 EQVGGGCFTPMGIFCENQ----HLTAEVLSLDGTRAERITAEIGDLEGARVAGI----RL 279 Query: 297 RFISNKNV 304 + + + + Sbjct: 280 KNVGAELI 287 >gi|240275436|gb|EER38950.1| porphobilinogen deaminase [Ajellomyces capsulatus H143] Length = 345 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 96/319 (30%), Positives = 145/319 (45%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K F IGTR S LAL R +L P + I+ D L E K Sbjct: 17 TKSTFTIGTRKSKLALVQTDLVRDALKAA--WPQYEFDILTKDAAADLDKVTPLREFTSK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118 L+TEE+E+ L++ +ID VH+ KD+PT++ + A +PRED RDV + +L Sbjct: 75 NLWTEELEELLLAKQIDLVVHALKDVPTQIPTTCILGAMMPREDPRDVLVIKKGLPNMTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGI 176 +L S++GTSS+RR A L R + D RG I+TRL KL + A++LA AG+ Sbjct: 135 AELPAGSIVGTSSVRRIAQLSRHYPHLIAKDVRGNIDTRLTKLDAQDGPFSALILAAAGL 194 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R + I L+ +D + GQG + IE N+ + +E+V+ I T + ER Sbjct: 195 LRTGQGARISHYLDSKDGKMLHAVGQGGLGIEIRANDERMKEMVEKIGDRKTTFACLAER 254 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 L L+G C + + TL IV + DGK E+ + +A Sbjct: 255 NLLRTLEGGCSAPLGVETEWVQDAEGKETLMLRAIVSSVDGKEAVEIEKVEKVTSGEEAE 314 Query: 287 NIGRDAAQYIRFISNKNVF 305 + A + + + Sbjct: 315 VFAKKVADELVVLGAGRIL 333 >gi|172039905|ref|YP_001799619.1| hypothetical protein cur_0225 [Corynebacterium urealyticum DSM 7109] gi|171851209|emb|CAQ04185.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 316 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 86/315 (27%), Positives = 144/315 (45%), Gaps = 18/315 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD--RITNRTLTEIG 59 + +GTR S LA A R ++D ++ + + T GD + + + ++G Sbjct: 3 NNRRLLVGTRGSTLATTQAGHVRQGMIDA----GYDAELHIVHTPGDASQASQIPVAKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G+FTE + L E D AVHS KD+PT + R D R+V IS + L Sbjct: 59 -VGVFTETLRTALDERECDVAVHSFKDLPTA-PDARFRAVVPKRVDSREVLISVDNKKLM 116 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L + +GTS+ RR + L R D+ ++ RG I TR+ ++ + A++LA AG++R+ Sbjct: 117 ELPEGAKVGTSAPRRVSQLRALRPDLQILPLRGNIGTRMGRVGD-DLDAVILARAGLERV 175 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E ++ E P+P QGA+C+E ++ +A V NH ++ V ER L+ Sbjct: 176 GWLDKAAESIDPELILPAPAQGALCVEVRADDEEAWNSVADQNHTPSYACVVSERTVLST 235 Query: 240 LDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNGN-------RCDAINIGR 290 L+ C + +A A + L G V A DG +R + R A +G Sbjct: 236 LEAGCSAPVAAHATLNEQQNQLTVTGGVFAIDGSRKLLETRTVDIDLAGDWRAAAAGVGA 295 Query: 291 DAAQYIRFISNKNVF 305 + + + + Sbjct: 296 EIGRILLDAGAAELV 310 >gi|302387415|ref|YP_003823237.1| porphobilinogen deaminase [Clostridium saccharolyticum WM1] gi|302198043|gb|ADL05614.1| porphobilinogen deaminase [Clostridium saccharolyticum WM1] Length = 300 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 99/305 (32%), Positives = 149/305 (48%), Gaps = 15/305 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ K RIGTR S LA+A A +L + ++ T+GDRI ++ L E GG Sbjct: 1 MKSKTIRIGTRRSALAVAQANIMAEALERTGT--GLSAELVLKLTEGDRILDKPLLEFGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG+F E E+ L+ GEID AVHSAKD+P +L +GL I A L RED RDV ++ + L Sbjct: 59 KGVFVTEFEQALLRGEIDFAVHSAKDLPMELEEGLGIVAVLEREDPRDVLVTPASGILSG 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDI------SVIDFRGKIETRLNKLNNNKAHAILLAYA 174 +IGTSSLRRK + + + RG + TRL+KL I+LA A Sbjct: 119 -KREIIIGTSSLRRKIQIEEIGKTMWPEALVRCENLRGNVLTRLSKLMEGSYDGIILAAA 177 Query: 175 GIKRLKK---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 G+KRL + + + F P+ GQG + +E + + + +VK + E+ + Sbjct: 178 GLKRLGLWEDSRYHYHCFDCDTFIPAGGQGILAVEGRL-DSGLEAVVKSLEDEEARLCLT 236 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 ER L L+ C I ++ K + GI + G+ + G + + Sbjct: 237 MERKILKLLNAGCHEPIGVYSRLKNGEIEILGI--SRRGEEAKRIHLRGGIGELDRLALL 294 Query: 292 AAQYI 296 AA+ + Sbjct: 295 AAESL 299 >gi|325091275|gb|EGC44585.1| porphobilinogen deaminase [Ajellomyces capsulatus H88] Length = 352 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 96/319 (30%), Positives = 145/319 (45%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K F IGTR S LAL R +L P + I+ D L E K Sbjct: 24 TKSTFTIGTRKSKLALVQTDLVRDALKAA--WPQYEFDILTKDAAADLDKVTPLREFTSK 81 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118 L+TEE+E+ L++ +ID VH+ KD+PT++ + A +PRED RDV + +L Sbjct: 82 NLWTEELEELLLAKQIDLVVHALKDVPTQIPTTCILGAMMPREDPRDVLVIKKGLPNMTL 141 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGI 176 +L S++GTSS+RR A L R + D RG I+TRL KL + A++LA AG+ Sbjct: 142 AELPAGSIVGTSSVRRIAQLSRHYPHLIAKDVRGNIDTRLTKLDAQDGPFSALILAAAGL 201 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R + I L+ +D + GQG + IE N+ + +E+V+ I T + ER Sbjct: 202 LRTGQGARISHYLDSKDGKMLHAVGQGGLGIEIRANDERMKEMVEKIGDRKTTFACLAER 261 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 L L+G C + + TL IV + DGK E+ + +A Sbjct: 262 NLLRTLEGGCSAPLGVETEWVQDAEGKETLMLRAIVSSVDGKEAVEIEKVEKVTSGEEAE 321 Query: 287 NIGRDAAQYIRFISNKNVF 305 + A + + + Sbjct: 322 VFAKKVADELVVLGAGRIL 340 >gi|163784391|ref|ZP_02179282.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1] gi|159880338|gb|EDP73951.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1] Length = 185 Score = 262 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 83/186 (44%), Positives = 115/186 (61%), Gaps = 2/186 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL A L P + +I ++TKGD+I + L ++GGKGLF Sbjct: 2 KIRIGTRKSKLALWQANFVAEQLKK--HFPELEVELIKITTKGDKILDVPLAKVGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE+ ++ EID AVHS KD+PT +GL + A RED RD F+S SLK+L Sbjct: 60 VKEIEEAMLRNEIDIAVHSLKDVPTYFPEGLGLVAITKREDPRDAFLSVKYSSLKELPEG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRRK L R D+ + D RG ++TR+ KL + A++LAYAG+KRL E Sbjct: 120 AVVGTSSLRRKVQLKINRPDLQIKDLRGNVDTRIRKLEEGQYDAVILAYAGLKRLGLEDK 179 Query: 185 IKEILN 190 +K++ + Sbjct: 180 VKQVFS 185 >gi|167737626|ref|ZP_02410400.1| porphobilinogen deaminase [Burkholderia pseudomallei 14] Length = 246 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 90/236 (38%), Positives = 137/236 (58%), Gaps = 2/236 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRAL 246 >gi|134045720|ref|YP_001097206.1| porphobilinogen deaminase [Methanococcus maripaludis C5] gi|132663345|gb|ABO34991.1| hydroxymethylbilane synthase [Methanococcus maripaludis C5] Length = 304 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 86/297 (28%), Positives = 133/297 (44%), Gaps = 11/297 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA+ L D+ II + T GD+ N+ L ++G G+F Sbjct: 2 KLRIGTRGSTLAMIQTEYIAGLLNDL----GVETEIIIVKTTGDKDQNKKLADLG-LGVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E++ K++ EID AVHS KD+PT + LQI+A RE D+ I Sbjct: 57 TKELDNKMLENEIDIAVHSLKDVPTLWSEELQITATPKRESPDDIIIWRKDSDFDIEHDE 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IGTSS+RR + L +++ RG + TR+NKL + I++A AG+ R + Sbjct: 117 LNIGTSSIRRTSFLQFTHPNLTPKLLRGNVATRINKLRTGEYDTIIMAKAGLIRQGIDLS 176 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E P+P QG I + + + K E++ I + T+ ER L E G C Sbjct: 177 EFNYKKPEI-LPAPAQGVIGVASRKADTKINEILDKICDKKTYIEAAAERWALKEYGGGC 235 Query: 245 KSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYI 296 ++ FA + L ++ G I S G D + + ++ + Sbjct: 236 QAPFGAFAIYDTEDGILNLRCELVDEQGTIKRVKSNEGFIICTTDDVELAKELGARV 292 >gi|331699360|ref|YP_004335599.1| Porphobilinogen deaminase [Pseudonocardia dioxanivorans CB1190] gi|326954049|gb|AEA27746.1| Porphobilinogen deaminase [Pseudonocardia dioxanivorans CB1190] Length = 327 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 88/297 (29%), Positives = 138/297 (46%), Gaps = 22/297 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+A + + L H + ++P+ST GDR + + E+G G+F Sbjct: 5 LRIGTRPSALAMAQSGQIADRLRAA----GHTVELVPVSTVGDR-SGAPVAELG-VGVFV 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + SGE+D A+HS KD+PT L + A RED RD ++ + L +L S Sbjct: 59 SAVRDAVASGEVDVAIHSYKDLPTAPDPRLTLVAVPGREDPRDALVARDGKVLGELPAGS 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT S RR A L + V+ RG ++TR+ K+ + + +++A AG++RL + Sbjct: 119 RVGTGSARRTAQLQALGLGLEVVPIRGNVDTRIGKVTSGELDGVIVAAAGLRRLGRIGEA 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQEL------VKVINHEDTWDSVNCERAFLAE 239 E+L P+P QGA+ +E P + E +++ +V ERA LA Sbjct: 179 TELLEPVQMLPAPAQGALAVECRAGVPGSTEHGLALALTALLDDPAARAAVTAERAVLAS 238 Query: 240 LDGSCKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 L+ C + I A L +V +DG S G+ DA Sbjct: 239 LEAGCTAPIGALADVVSDLDDAGRVVDRLSLRAVVGTADG-ALLRASVTGDIDDAEK 294 >gi|86739201|ref|YP_479601.1| porphobilinogen deaminase [Frankia sp. CcI3] gi|86566063|gb|ABD09872.1| hydroxymethylbilane synthase [Frankia sp. CcI3] Length = 395 Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats. Identities = 94/344 (27%), Positives = 147/344 (42%), Gaps = 59/344 (17%) Query: 13 SPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKL 72 S LALA + ++L + ++P+ T GDR + +++IGG G+F + L Sbjct: 49 SALALAQSGTVAATLRARV---GCAVELVPIVTAGDRSSGE-ISQIGGTGVFVSALRDAL 104 Query: 73 ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSL 132 +SGEID AVHS KD+PT GL ++A PR D RDV ++ + + L +L + I T S Sbjct: 105 LSGEIDLAVHSLKDLPTATPPGLVLAAVPPRADPRDVLVAPSGRRLAELRAGARIATGSP 164 Query: 133 RRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192 RR A L + V+ RG ++TRL K + + A++LA+AG+ RL + + EIL Sbjct: 165 RRAAQLRALGLGLEVVTIRGNVDTRLKKAIDGEVDAVVLAHAGLARLDRLDAVTEILEPT 224 Query: 193 DFPPSPGQGAICIETHVN--------------------------------------NPKA 214 P+PGQGA+ IE + Sbjct: 225 VMLPAPGQGALAIECTGGAGLVVAGPARALVPAGPGSGPAVGQTGGETWSDGGQPVDTGL 284 Query: 215 QELVK-VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGS---------------- 257 EL++ V++ + +V ERAFLA ++ C + + A Sbjct: 285 AELLRFVLDDASSSVAVRAERAFLAGIEAGCTAPVGALAELLPELAEGAAAEAGGAPPAG 344 Query: 258 TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 L +V A DG G+ D +G+ A + Sbjct: 345 RLCLRAVVAAPDGSDVLRRDVTGSAVDPEALGQRLADDMLSAGA 388 >gi|304393221|ref|ZP_07375149.1| porphobilinogen deaminase [Ahrensia sp. R2A130] gi|303294228|gb|EFL88600.1| porphobilinogen deaminase [Ahrensia sp. R2A130] Length = 324 Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats. Identities = 85/317 (26%), Positives = 136/317 (42%), Gaps = 20/317 (6%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-LFTE 66 I TR S +ALA A L + +P ++ + + +GDR L GGKG F Sbjct: 6 IATRKSKMALAQANHVADLLREA--VPGLDVDLAENNPRGDRDQISKLDRHGGKGGAFVA 63 Query: 67 EIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL-- 123 EI +++G A+HS KDMP + GL I AYL R+D D + ++ + Sbjct: 64 EIRADIVAGRSQVAMHSLKDMPGNEETPGLVIGAYLTRDDPTDSLVLRDGITMDQMRETQ 123 Query: 124 --HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN------------KAHAI 169 +GT+S+RR A L + +I FRG ++R+ KL+ A I Sbjct: 124 GDGLKLGTNSVRRAAFLRNLFPNAEIIHFRGAADSRIEKLDKGLMQQLVDGGEVGPADGI 183 Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 LLA +G+ R+ I + P+ GQG + +E ++ + +E + I+ + Sbjct: 184 LLATSGMARVGVSDRISHTFTTSEMLPAVGQGIVAVECGSSDWQTREWLARIDDANARAC 243 Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 ER L LDG C S IA + +G T+ V+ DG + +G +G Sbjct: 244 AEAEREVLWVLDGHCNSPIAAHSVIEGDTMTMESAVMEIDGDKIIRHTASGPAEYPRELG 303 Query: 290 RDAAQYIRFISNKNVFN 306 R + + + Sbjct: 304 RTVGLALVAKGAQAIIE 320 >gi|207109051|ref|ZP_03243213.1| porphobilinogen deaminase [Helicobacter pylori HPKX_438_CA4C1] Length = 242 Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 90/246 (36%), Positives = 131/246 (53%), Gaps = 5/246 (2%) Query: 10 TRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIE 69 +R S LAL A + L I + TKGD+I + L +IGGKGLFT+E+E Sbjct: 1 SRGSELALWQANHIKERLKKECF---IESEIQIVKTKGDKILDTPLNKIGGKGLFTKELE 57 Query: 70 KKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGT 129 + L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + +GT Sbjct: 58 ELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKVGT 117 Query: 130 SSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KVIKEI 188 +SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + ++ Sbjct: 118 TSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYRKA 177 Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248 ++E+ PS GQGA+ +E N+ ++ +N E + ER F+ L+G C+ I Sbjct: 178 FSVEEMIPSMGQGALGVEMLKNHKHFIT-LQKLNDEKSAFCCRLEREFIKGLNGGCQIPI 236 Query: 249 AGFAYC 254 A Sbjct: 237 GVHASL 242 >gi|256371068|ref|YP_003108892.1| porphobilinogen deaminase [Acidimicrobium ferrooxidans DSM 10331] gi|256007652|gb|ACU53219.1| porphobilinogen deaminase [Acidimicrobium ferrooxidans DSM 10331] Length = 291 Score = 261 bits (668), Expect = 9e-68, Method: Composition-based stats. Identities = 97/302 (32%), Positives = 147/302 (48%), Gaps = 16/302 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RI TR S LA A L ++ + T GDR +L EIGG+G+F Sbjct: 3 PVRIATRRSALARWQASLVGERLGR--------YELVEVHTAGDRDQASSLAEIGGQGVF 54 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E++ ++ GE D AVHSAKD+PT L ++A L R D RD + L++LA+ Sbjct: 55 VKEVQAAVVRGEADIAVHSAKDLPTAAGP-LLLAAVLERADARDAIV---GARLEELAIG 110 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTS+ RR A L R D+ V+ RG I TRL ++ + AI++A A ++RL E+ Sbjct: 111 ARVGTSAPRRAAQLRLLRPDLEVVSIRGNIATRLGRV--GELDAIVMAVAALERLGLEEP 168 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 L E P GQGAI +E + E ++ ++ + + + ERA LA C Sbjct: 169 PWWPLPEEVLCPQAGQGAIAVECAPDADGLIERLRSLDDDRSRREIEAERAVLAAFGTGC 228 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + A+ GS+L + + DG EV R G D +G A+ +R + + Sbjct: 229 ALPLGARAHADGSSLRLRAVAVDPDGTRQLEVEREG--VDPATLGATVAEVLRRLGADAL 286 Query: 305 FN 306 Sbjct: 287 VG 288 >gi|154150777|ref|YP_001404395.1| porphobilinogen deaminase [Candidatus Methanoregula boonei 6A8] gi|153999329|gb|ABS55752.1| porphobilinogen deaminase [Methanoregula boonei 6A8] Length = 294 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 92/301 (30%), Positives = 143/301 (47%), Gaps = 20/301 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LALA + + + +ST+GD +T L EIG +G+F Sbjct: 2 PVRIGTRGSRLALAQTAIVIKKIEAL----GIEVEQKIISTQGDEVTGVPLHEIGKQGVF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 ++ +++ EIDCAVHS KD+P G+ SA L R+ D S Sbjct: 58 VRALDDAILNNEIDCAVHSMKDIPAIRPSGVFTSAILKRDSPADYLAFTGPVS-----AV 112 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 V+GTSS RR+A LLR + + D RG ++TR+ K++ + +A++LA AG+ RL + Sbjct: 113 KVVGTSSTRRRAQLLRHDPGLDIRDLRGNVDTRIRKMSEGQYNAVVLAEAGLSRLGIR-I 171 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E L E F PSP QG I + + +P E++ ++H T V ERA + ++ C Sbjct: 172 PGERLPPEKFVPSPNQGTIAVVSRA-DPSIMEVLSSLDHPATRKDVAIERAVMEQVGAGC 230 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-GNRCDAINIGRDAAQYIRFISNKN 303 + + + K VL+ DG + + G +A G +R + Sbjct: 231 FTPMGIYC--KDG--SLIAEVLSLDGTRAERIEKKIGTLEEARAEGNA----LRERAGAL 282 Query: 304 V 304 + Sbjct: 283 I 283 >gi|187734604|ref|YP_001876716.1| porphobilinogen deaminase [Akkermansia muciniphila ATCC BAA-835] gi|187424656|gb|ACD03935.1| porphobilinogen deaminase [Akkermansia muciniphila ATCC BAA-835] Length = 325 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 92/312 (29%), Positives = 147/312 (47%), Gaps = 23/312 (7%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG-- 59 K IGTR S LALA A R++L + P ++ + T GDR T+ L ++ Sbjct: 3 SKNTLIIGTRGSALALAQADMVRAAL--SLRYPELDVRCEIIHTIGDRRTDVPLADVARV 60 Query: 60 ----GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115 KG+F +E+E L G ID AVHS KD+P++L G ++A LPR + DV I+ Sbjct: 61 SGMVDKGIFIKELETALRDGRIDVAVHSLKDVPSELAAGFTLAAVLPRAAVEDVLITKE- 119 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWR-SDISVIDFRGKIETRLNKLNN-NKAHAILLAY 173 D + T S+RR+ + + S + + RG + TRL KL A++LA Sbjct: 120 ---PDWNGSGTLATGSVRRRLMARTYWGSGLRFENLRGNVPTRLGKLVEHPGWDAVILAR 176 Query: 174 AGIKRLKK---------EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224 AG++RL K+ L +E F P+ GQG + +E ++ + E+++ IN Sbjct: 177 AGLERLGLYAPETLVEGRKLYMRPLPVEVFIPAVGQGIVGMECRSSDRETAEMLEGINDP 236 Query: 225 DTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284 +++ ERAFL L +C + + +A+ G L + V G+R Sbjct: 237 ESFACALAERAFLVRLGANCSTPVGVYAHPDGEELVLRAAYYVPGREEPFAVVIRGDRKA 296 Query: 285 AINIGRDAAQYI 296 +G A + + Sbjct: 297 PEALGLRAFEEL 308 >gi|167900391|ref|ZP_02487792.1| porphobilinogen deaminase [Burkholderia pseudomallei 7894] Length = 245 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 89/235 (37%), Positives = 136/235 (57%), Gaps = 2/235 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I+ +L+++D P+ GQGA+ IE + ++ + +V ERA Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRA 245 >gi|134109785|ref|XP_776442.1| hypothetical protein CNBC4970 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259118|gb|EAL21795.1| hypothetical protein CNBC4970 [Cryptococcus neoformans var. neoformans B-3501A] Length = 481 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 95/410 (23%), Positives = 151/410 (36%), Gaps = 105/410 (25%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHK-----------------------IPPHNI 38 + F +GTR S LAL L +H + P+ Sbjct: 29 QTNTFILGTRKSNLALVQTGHVADDLRRLHSGAGSKFGETREEGDDAEQGDVPFVHPYTF 88 Query: 39 VIIPLSTKGDRITNRTLTEI-------GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91 I ++T GDR L + K L+T+E+E +LI+G D VHS KD+PT L Sbjct: 89 SIESMTTVGDRNQTTPLHLLSPYSSTQPAKSLWTDELEARLINGHFDMLVHSLKDVPTVL 148 Query: 92 LKGLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVI 148 G +I R D RD + + L+DL +V+GT S+RR A L R ++ Sbjct: 149 KDGCEIGCMAKRHDPRDALVVKQGLPYKRLEDLPDGAVVGTGSVRRVAQLKRAFPNLVFE 208 Query: 149 DFRGKIETRLNKLNNNK--AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206 D RG + TR NKL+N + A++LA +G++RL L+ + GQGA+ IE Sbjct: 209 DMRGNLNTRFNKLDNPQSPFSALILAMSGLERLGMAHRATSPLSSPTLMHAVGQGALAIE 268 Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY------------- 253 +P+ + ++ + H T S ER L L+G C + + Sbjct: 269 IRSTDPRVRNCLRGLGHWQTEWSCGAERGCLRVLEGGCSVPVGVESELVELDEDEVAAHP 328 Query: 254 -----------------CKGS--TLYFYGIV----------------------------- 265 +G L+F G+V Sbjct: 329 ELLEGVEDPFKGQEESPLEGDSPMLWFSGLVDTTSAPTPSTPTFSSHSLPPLRTRLAKLT 388 Query: 266 -----LASDGKIFHEVS----RNGNRCDAINIGRDAAQYIRFISNKNVFN 306 ++DG + + A G + A+ +R + + + Sbjct: 389 LHSCVTSTDGSKHVLFTPPPVLVRSYRQAEQFGEECARRLRGMGAGEILD 438 >gi|237786464|ref|YP_002907169.1| Porphobilinogen deaminase [Corynebacterium kroppenstedtii DSM 44385] gi|237759376|gb|ACR18626.1| Porphobilinogen deaminase [Corynebacterium kroppenstedtii DSM 44385] Length = 295 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 96/306 (31%), Positives = 142/306 (46%), Gaps = 20/306 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITN--RTLTEIGGKGL 63 RIGTR S LAL A R +L+ + + T GD + IG G+ Sbjct: 2 IRIGTRGSALALTQAGHVRDALISA----GLEAELFTVHTPGDASQGAGTPVARIG-VGV 56 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ + L +GE AVHS KD+PT A PR D RDV S L DL Sbjct: 57 FTQTLRTALAAGECSLAVHSFKDLPTA-PDPRFRLAVPPRVDARDVVFSRDRIPLADLPA 115 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S+IGT + RR + R D +V+ RG ++TR+ +L A++LA AG++RL + Sbjct: 116 GSMIGTGAPRRMGQVRALRPDCTVVPIRGNVDTRIGRL-EKDLDAVILARAGVERLGRLA 174 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVN-----NPKAQELVKVINHEDTWDSVNCERAFLA 238 E L+++ P+P QGA+ +E + +A + V++HE + ERA LA Sbjct: 175 EATETLDVDTVLPAPAQGALAVEAVAEGHENCSEEALYAIHVLDHEMSHRRAIAERAVLA 234 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+ C + + +A F V A DG S G +IG AA+Y+R Sbjct: 235 SLNAGCTAPVGAYATED----SFRAGVFAVDGSERVTWSSEGEPT--EDIGHQAAEYLRA 288 Query: 299 ISNKNV 304 + ++ Sbjct: 289 HNAMDL 294 >gi|58264690|ref|XP_569501.1| hydroxymethylbilane synthase [Cryptococcus neoformans var. neoformans JEC21] gi|57225733|gb|AAW42194.1| hydroxymethylbilane synthase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 481 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 95/410 (23%), Positives = 151/410 (36%), Gaps = 105/410 (25%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHK-----------------------IPPHNI 38 + F +GTR S LAL L +H + P+ Sbjct: 29 QTNTFILGTRKSNLALVQTGHVADDLRRLHSGAGSKFGETREEGDDAEQGDVPFVHPYTF 88 Query: 39 VIIPLSTKGDRITNRTLTEI-------GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91 I ++T GDR L + K L+T+E+E +LI+G D VHS KD+PT L Sbjct: 89 SIESMTTVGDRNQTTPLHLLSPYSSTQPAKSLWTDELEARLINGHFDMLVHSLKDVPTVL 148 Query: 92 LKGLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVI 148 G +I R D RD + + L+DL +V+GT S+RR A L R ++ Sbjct: 149 KDGCEIGCMAKRHDPRDALVVKQGLPYKRLEDLPDGAVVGTGSVRRVAQLKRAFPNLVFE 208 Query: 149 DFRGKIETRLNKLNNNK--AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206 D RG + TR NKL+N + A++LA +G++RL L+ + GQGA+ IE Sbjct: 209 DMRGNLNTRFNKLDNPQSPFSALILAMSGLERLGMAHRATSPLSSPTLMHAVGQGALAIE 268 Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY------------- 253 +P+ + ++ + H T S ER L L+G C + + Sbjct: 269 IRSTDPRVRNCLRGLGHWQTEWSCGAERGCLRVLEGGCSVPVGVESELVELDEDEVAAHP 328 Query: 254 -----------------CKGS--TLYFYGIV----------------------------- 265 +G L+F G+V Sbjct: 329 ELLEGVEDPFKGQEEIPLEGDSPMLWFSGLVDTTSAPTPSTPTFSSHSLPPLRTRLAKLT 388 Query: 266 -----LASDGKIFHEVS----RNGNRCDAINIGRDAAQYIRFISNKNVFN 306 ++DG + + A G + A+ +R + + + Sbjct: 389 LHSCVTSTDGSKHVLFTPPPVLVRSYRQAEQFGEECARRLRGMGAGEILD 438 >gi|327398182|ref|YP_004339051.1| porphobilinogen deaminase [Hippea maritima DSM 10411] gi|327180811|gb|AEA32992.1| porphobilinogen deaminase [Hippea maritima DSM 10411] Length = 299 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 90/278 (32%), Positives = 144/278 (51%), Gaps = 10/278 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K +IGTR S LAL A + L D I+P+ T GD+ T++ L ++GGKG Sbjct: 5 RKQLKIGTRGSKLALWQAEFAKKRLEDK----GFECEIVPIKTSGDK-TDKPLYQLGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIEK L+ ID AVHS KDM + R+ D+F+S L ++ Sbjct: 60 LFIKEIEKALLDKTIDIAVHSLKDMSVFEDERFDFI-VFERDYWEDIFVSFEGNFL-EIK 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ +GTSSLRR+A LL++R D +D RG ++TRL KL + + AI+++ +G+KRL Sbjct: 118 KNARVGTSSLRRRAELLQYRDDFEFVDLRGNLDTRLKKLRDGEVDAIVVSKSGLKRLGLY 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + ++ P+ GQG I +E + + ++ +K + E T ++ ERAF+ + + Sbjct: 178 DEAY-MYDLRFATPAAGQGVIAVEFLSDF-EFRDELKQLEDEKTRICIDSERAFVRQFNA 235 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRN 279 SC I A + + D + + SR Sbjct: 236 SCNYPIGALARFEQDEFFMQITYGFVDNLRRVIKYSRR 273 >gi|296109592|ref|YP_003616541.1| porphobilinogen deaminase [Methanocaldococcus infernus ME] gi|295434406|gb|ADG13577.1| porphobilinogen deaminase [Methanocaldococcus infernus ME] Length = 287 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 93/296 (31%), Positives = 138/296 (46%), Gaps = 17/296 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A L + + + + T+GD+I +R L IG G+FT Sbjct: 1 MIIGSRGSKLALYQANLVLKKLKSL----GIDGEVKIIKTRGDQIKDRALHSIG-IGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ L++ EID AVHS KD+PT L L R+ D+ I++ Sbjct: 56 KELDLSLLNHEIDIAVHSLKDIPTVWNSRLSY-VVLERDYPNDLLIANK-------EDIK 107 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSSLRR+A L D RG ++TRL KL +N+ AI+L+ AG++RL + Sbjct: 108 VIGTSSLRRRAFLKELYRDAEFKLLRGNVDTRLRKLKDNEYDAIVLSEAGVRRLNIDLSE 167 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + P+PGQG I + + K + +++ IN + T+ ER L EL C Sbjct: 168 FLVYKLPI-LPAPGQGVIAVAYRKEDEKIKNILEKINDKKTFLETTAERKALNELGCGCH 226 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIRF 298 FA +G L V D I E S + A +G + +R Sbjct: 227 VPFGAFAKYEGKRLMLKVAVANKDRVIKKESSICCEVDEIEKAEKLGESLGRELRR 282 >gi|269791662|ref|YP_003316566.1| porphobilinogen deaminase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099297|gb|ACZ18284.1| porphobilinogen deaminase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 307 Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 99/290 (34%), Positives = 145/290 (50%), Gaps = 12/290 (4%) Query: 10 TRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIE 69 TR SPLA+A A + + + H++ ++ +ST GDR R L GG G F + +E Sbjct: 8 TRSSPLAMAQARMWKDRIESL----GHSVRLLDVSTHGDRDRRRHLACFGGFGAFVKALE 63 Query: 70 KKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGT 129 +L+SG+ AVHS KD+P+ GL I+ L R DV ++ SL++L +VIGT Sbjct: 64 DRLLSGQGHGAVHSLKDVPSVQPDGLVIAGVLERGPRGDVLVTREGLSLEELPSGAVIGT 123 Query: 130 SSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEIL 189 SS+RR A + R D++V RG + +RL KL H I+LA AG++RL + E+ Sbjct: 124 SSIRRAAQVRMLRGDLNVECCRGNVHSRLRKLEQGLFHGIVLARAGLERLGIRAPMAELP 183 Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 F SPGQGA+ +E + + L + H TW V ER+FL C + +A Sbjct: 184 ----FITSPGQGAVALEAREGS-ELHLLGARLTHRSTWLEVLAERSFLKAFGMGCSAPVA 238 Query: 250 GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYI 296 A TL VL+ +G E + DA +G A + I Sbjct: 239 ASAVMDRDTLTLKVQVLSPNGTSAAEAEVSCVPWGEEDAYALGEAAFREI 288 >gi|45358435|ref|NP_987992.1| porphobilinogen deaminase [Methanococcus maripaludis S2] gi|44921193|emb|CAF30428.1| Porphobilinogen deaminase [Methanococcus maripaludis S2] Length = 304 Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 84/297 (28%), Positives = 135/297 (45%), Gaps = 11/297 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA+ L D+ II + T GD+ N+ L ++G G+F Sbjct: 2 KLRIGTRGSTLAMVQTEYIAGLLNDL----DIETEIIIVKTTGDKDQNKKLADLG-IGVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E++ K++ EID AVHS KD+PT LQI+A RE D+ I Sbjct: 57 TKELDNKMLENEIDIAVHSLKDVPTLWSDELQITATPKRESPDDIIIWRKDCDFDIEHDE 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +GTSS+RR + L +++ RG + TR+NKL N + I++A AG+ R + Sbjct: 117 LNVGTSSIRRTSFLQFTNPNLTPKLLRGNVATRINKLRNGEYDTIVMAKAGLIRQGIDLS 176 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ P+P QG I + + + K ++++ I + T+ ER L E G C Sbjct: 177 EFNYKKLDI-LPAPAQGVIGVASRKADAKINQILEKICDKKTYIEATAERWALKEYGGGC 235 Query: 245 KSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYI 296 ++ FA + L ++ G I S G D + + ++ + Sbjct: 236 QAPFGAFAIYDTEEGILNLRCELVDEQGTIKRVKSNEGFVICTTDDVELSKELGARV 292 >gi|227502550|ref|ZP_03932599.1| porphobilinogen deaminase [Corynebacterium accolens ATCC 49725] gi|227076712|gb|EEI14675.1| porphobilinogen deaminase [Corynebacterium accolens ATCC 49725] Length = 295 Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 93/301 (30%), Positives = 147/301 (48%), Gaps = 8/301 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F+IGTR S LA A R L+D + + ++T GD TN E G G+FT Sbjct: 2 FQIGTRGSKLATTQAGHVRDWLIDA----GFDSELHIVTTAGD--TNMAPVERIGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + L GE D AVHS KD+PT ++ R+D R+V ++ +L L + Sbjct: 56 QALREALCRGECDIAVHSFKDLPTAEDDRFRL-VIPQRQDSREVLVARDGMTLMQLPEGA 114 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTS+ RR + L R D+ + RG I+TR++K+ + + A++LAYAG+ R E Sbjct: 115 RVGTSAPRRISQLAALRPDLEIRPLRGNIDTRMSKVTDGELDAVVLAYAGLLRGGYEDRA 174 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +I + E F P+P QGA+ IE A L V++ + T ++ RA LA L+ C Sbjct: 175 SDIFDPELFMPAPAQGALAIEAVAGTEAAAALDAVVDEQATAAALAE-RAVLARLEAGCT 233 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + +A + G L G V A DG + +G +A +G + + ++ Sbjct: 234 APVAATSRWNGDQLTVRGGVFALDGSRQLTATASGTAAEAAELGARVSDELFAQGAADLL 293 Query: 306 N 306 Sbjct: 294 G 294 >gi|321253441|ref|XP_003192732.1| phorphobilinogen deaminase; Hem3p [Cryptococcus gattii WM276] gi|317459201|gb|ADV20945.1| Phorphobilinogen deaminase, putative; Hem3p [Cryptococcus gattii WM276] Length = 481 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 94/410 (22%), Positives = 146/410 (35%), Gaps = 105/410 (25%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIP-----------------------PHNI 38 + F +GTR S LAL L +H P+ Sbjct: 29 QTNTFILGTRKSNLALVQTGHVADDLRRLHSAAGSKFGETREEGDDAEQGDVPFVHPYTF 88 Query: 39 VIIPLSTKGDRITNRTLTEI-------GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91 I ++T GDR L + K L+T+E+E +LI+G D VHS KD+PT L Sbjct: 89 TIESMTTVGDRNQTTPLHLLSPYSSTQPAKSLWTDELEARLINGHFDMLVHSLKDVPTVL 148 Query: 92 LKGLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVI 148 G +I R D RD + + L+DL +V+GT S+RR A L R ++ Sbjct: 149 KDGCEIGCMAKRHDPRDALVVKQGLPYKRLEDLPDGAVVGTGSVRRVAQLKRAFPNLVFE 208 Query: 149 DFRGKIETRLNKLNNNK--AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206 D RG + TR NKL+N + A++LA +G++RL L+ + GQGA+ IE Sbjct: 209 DMRGNLNTRFNKLDNPQSPFSALILAMSGLERLGMAHRATSPLSSPTLMHAVGQGALAIE 268 Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA--------------IAGFA 252 +P+ + ++ + H T S ER L L+G C IA Sbjct: 269 IRSTDPRVRNCLRGLGHWQTEWSCGAERGCLRVLEGGCSVPVGVESELVELDEDEIAAHP 328 Query: 253 YCKGS----------------------------------------------------TLY 260 + L Sbjct: 329 ELREGVEDPFKDQEESPLEGDSPMLWFSGLVDTTSAATPSTPTFSSHSLPPLRTRLAKLT 388 Query: 261 FYGIVLASDGKIFHEVS----RNGNRCDAINIGRDAAQYIRFISNKNVFN 306 + V ++DG + + A G + A+ +R + + + Sbjct: 389 LHSCVTSTDGTKHVLFTPPPVLVRSYRQAEQFGEECARKLRGMGAGEILD 438 >gi|126178933|ref|YP_001046898.1| porphobilinogen deaminase [Methanoculleus marisnigri JR1] gi|125861727|gb|ABN56916.1| hydroxymethylbilane synthase [Methanoculleus marisnigri JR1] Length = 294 Score = 259 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 136/288 (47%), Gaps = 16/288 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LALA + L D ++ ++T+GD T L IGG+G+F Sbjct: 3 LRIGTRGSALALAQTNKVVGMLADR----GIEAEVVTIATEGDTATGVPLHAIGGQGVFV 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++ ++ GEID AVHS KD+P GL A L R+ D + L S Sbjct: 59 RALDDAILRGEIDAAVHSMKDIPAARPAGLVCCAVLERDSPADFLVHE-----CPLDAVS 113 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIG+SS RR A LLR + V RG ++TRL KL + AI+LA AG++RL + Sbjct: 114 VIGSSSTRRCAQLLRDAPALEVKQLRGNVDTRLRKLREGQYDAIVLAEAGLQRLGLT-LP 172 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L + F PSP QG I + ++P ++H T V ERA + E+ G C Sbjct: 173 GEPLPTDRFVPSPNQGTIAVVCR-DDPAVAGAFAALDHAPTRLDVEIERAVMEEVGGGCF 231 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-GNRCDAINIGRDA 292 + + G+ VLA DG + + R+ +A GR Sbjct: 232 TPQGIYCR-NGN---LIAEVLALDGSRWERIERHVATVGEAREWGRAL 275 >gi|219852323|ref|YP_002466755.1| porphobilinogen deaminase [Methanosphaerula palustris E1-9c] gi|219546582|gb|ACL17032.1| porphobilinogen deaminase [Methanosphaerula palustris E1-9c] Length = 294 Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats. Identities = 89/302 (29%), Positives = 140/302 (46%), Gaps = 20/302 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + S L + ++T GD +T L EIGG+G+F Sbjct: 3 IRVGTRGSALARVQTEKVCSMLASR----GIETETVVITTHGDAVTGVPLHEIGGQGVFV 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++ + + EIDCAVHS KD+P G+ A L R D ++ Sbjct: 59 RALDDAIEAQEIDCAVHSLKDVPALRPPGVLTCAVLKRNSPADFLAVDAVEN------PQ 112 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +IG+SS RR+A LLR + V RG ++TR+ KL + I+LA AG++RL + Sbjct: 113 IIGSSSTRRRAQLLRHDPSLEVKQLRGNVDTRIRKLKAGEYDGIVLAEAGLQRLGLS-LK 171 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L +++F PSP QG + + + + L ++HE T V ERA + EL G C Sbjct: 172 GKRLPVDEFVPSPNQGTVAVVCREDPSLIETLACALDHEGTRQDVVFERAVMEELGGGCF 231 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-GNRCDAINIGRDAAQYIRFISNKNV 304 + G + VLA DG + + + + +A IGR ++ + + Sbjct: 232 VPEGVYCR-DG---HLIAEVLALDGSRYQRIEADPSDVREAREIGR----RLKVQAADLI 283 Query: 305 FN 306 + Sbjct: 284 SD 285 >gi|18312026|ref|NP_558693.1| porphobilinogen deaminase [Pyrobaculum aerophilum str. IM2] gi|25453025|sp|Q8ZYW7|HEM3_PYRAE RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|18159451|gb|AAL62875.1| porphobilinogen deaminase (hemC) [Pyrobaculum aerophilum str. IM2] Length = 297 Score = 258 bits (661), Expect = 6e-67, Method: Composition-based stats. Identities = 89/298 (29%), Positives = 145/298 (48%), Gaps = 8/298 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++ TR S L+L E + + V P + I + T GD + ++ L +IG KG+F Sbjct: 3 LKVATRGSRLSLLQTEEFLAQIKAVE--PRVDFEIKIVKTTGDLVQDKPLFQIGVKGIFE 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+ ++ GE D A+HS KD+P+++ GL ++ + R D +S L+ L + Sbjct: 61 KEVNLAVLKGEADIAIHSLKDLPSEISPGLVLAGFSKRTLPYDAVVSAVGYDLESLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--KKEK 183 ++GTSS+RR + R D+ + RG ++TR+ K+ K A ++A AGI RL + Sbjct: 121 LVGTSSVRRAEFIKSLRPDVRIEPLRGNVDTRVQKILQGKYDAAVMAAAGILRLYGESPP 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V +L E PP PGQG + +L+K + ER FL + Sbjct: 181 VKLSLLRPELLPPPPGQGIVAAVVREGEGWLIDLLKKASDPRATVEALAEREFLKNVGAG 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C A+ G A+ + + F AS GK F V G D + +GR AA+ I+ ++ Sbjct: 241 CHVAVGGTAFSRNGYIEFIAGYAAS-GKRFV-VKLFG--EDPVEVGRRAAEEIKRVAA 294 >gi|68068433|ref|XP_676126.1| porphobilinogen deaminase [Plasmodium berghei strain ANKA] gi|56495675|emb|CAH94424.1| porphobilinogen deaminase, putative [Plasmodium berghei] Length = 383 Score = 258 bits (659), Expect = 9e-67, Method: Composition-based stats. Identities = 99/359 (27%), Positives = 169/359 (47%), Gaps = 54/359 (15%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIG 59 K IGTR SPLA+ + + + L+ K N+++ P+ T GD+I ++T+ G Sbjct: 14 ANKEIIIGTRNSPLAIKQSEKVKKKLLTYFKKINENINVILKPIKTTGDKILDKTVGSFG 73 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL- 118 GKG+FT+E++++LI +D VHS KD+PT L + +S +L R+ I D F+S +SL Sbjct: 74 GKGIFTKELDEELIKNNVDICVHSLKDIPTVLPDNIHLSCFLKRDTINDAFLSIKYKSLR 133 Query: 119 -----------------------KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIE 155 KD+ L I TSSLRR + + ++ + RG I Sbjct: 134 DINKELSQKNITNNISSSSHVIDKDIDLPRTIATSSLRRTSQIRYKYKNLKLKFIRGNIN 193 Query: 156 TRLNKLNNNKAHAILLAYAGIKRL----------------------------KKEKVIKE 187 TR+ KL N +I++A+ G++RL ++ + Sbjct: 194 TRIAKLFNETFDSIIIAFCGLERLISKKVLGQIMKNNIKSKPYIINYKDISIDLSRLNIQ 253 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 LN P+ QG I + ++ NN + +++K IN+E + + ER FL ++DGSC Sbjct: 254 KLNTNIMCPALCQGIIAVTSNKNNSEISQILKNINNEKSQIMGSIERTFLHKIDGSCTMP 313 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 I G+ + ++F I+ +G +++ + + I +AA+ I+ FN Sbjct: 314 IGGYTKFSKNKIFFNAIINDINGLENYKIKVVRHLNNLDGIADEAAEKIKEKIGIEQFN 372 >gi|119480587|ref|XP_001260322.1| porphobilinogen deaminase [Neosartorya fischeri NRRL 181] gi|119408476|gb|EAW18425.1| porphobilinogen deaminase [Neosartorya fischeri NRRL 181] Length = 363 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 97/334 (29%), Positives = 139/334 (41%), Gaps = 39/334 (11%) Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT---LTEIGG----- 60 G R S LAL S L P I S GD L+++ G Sbjct: 26 GCRKSELALVQTRWVTSKLGQTLD-PSPTFQIATGSAVGDADKQAPFAVLSKLTGGSDIG 84 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117 K L+T E+E L++G++ C VHS KDMPT L + A RED D S Sbjct: 85 KSLWTNELELDLVAGKVHCLVHSLKDMPTTLPPHCLLGAVPEREDCSDAVCMRSDLKFTS 144 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAG 175 + L S++GTSS RRKAL+ R + V++ RG ++TRL KL +++ ILLA AG Sbjct: 145 IDQLPPGSIVGTSSSRRKALVRRNWPHLEVVECRGNVDTRLAKLDAPSSRFSCILLATAG 204 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + RL I L+ FP + GQGA+ +E + P ELV+ ++H+ + ERA Sbjct: 205 LLRLGLGHRITHRLDDSIFPYAVGQGALGLEVSTDRPDILELVRHVDHKPSRWRGIAERA 264 Query: 236 FLAELDGSCKSAIAGFAYCK----------------------GSTLYFYGIVLASDGKIF 273 L L G C S I + + G L +VL +G Sbjct: 265 MLRSLQGGCSSPIGVQSSLEPLGKEENGSTEDDSQRGRDSSSGGNLSLRAMVLHIEGTSE 324 Query: 274 HEVSRNGNR---CDAINIGRDAAQYIRFISNKNV 304 +A +G A + + + Sbjct: 325 IVAEDMATVRCDEEAELLGVSVANMLLAKGARGL 358 >gi|291295115|ref|YP_003506513.1| porphobilinogen deaminase [Meiothermus ruber DSM 1279] gi|290470074|gb|ADD27493.1| porphobilinogen deaminase [Meiothermus ruber DSM 1279] Length = 299 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 85/316 (26%), Positives = 138/316 (43%), Gaps = 40/316 (12%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + IG R S LA A L + P I + +K + Sbjct: 2 RVIVIGARASLLAQAQTRWVVERLKE--NWPETEFKIRTIQSKSASEQSAA--------- 50 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 E + + L E+D AV+S K +PT+ GL++ A R + R+ + +A+ L+DL Sbjct: 51 --EALRQALGKREVDIAVYSLKYLPTQEAPGLRLVAVPKRMEPREALVGRSAKRLEDLPK 108 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+G +SLRRKA LL R D++V D G ++ RL+ L + A+++ A + RL Sbjct: 109 GAVVGVNSLRRKAQLLAHRPDLNVCDLEGDVDDRLSALGTGEYDAMIIGAASLLRLDLRN 168 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA----- 238 I ++++ E P+PGQGA+ +E + A+EL +NH ++ ERAFL Sbjct: 169 RIDQLIDPEVMLPAPGQGALGLEVRQGDDWAEELAYSLNHRASFVRTTAERAFLRALGAG 228 Query: 239 ---------ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 L+G TL G+V + DG G+ +A +G Sbjct: 229 DGCAAAALATLEG-------------DDTLLLQGVVASPDGHELIRAEIEGDAEEAAELG 275 Query: 290 RDAAQYIRFISNKNVF 305 D AQ + + + Sbjct: 276 HDLAQDLLAEGGRELL 291 >gi|294815172|ref|ZP_06773815.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064] gi|294327771|gb|EFG09414.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064] Length = 333 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 90/308 (29%), Positives = 140/308 (45%), Gaps = 11/308 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG---GK 61 + +G+R S LA A E L + + P + GDR TL+ + G Sbjct: 7 TYFVGSRASNLAKAQVREYLRPLRE--RFPEITFTHRVILEGGDRDRTSTLSAVSAVNGG 64 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 F+ E L G++D VHS KD+PT GL + RED+RD +L L Sbjct: 65 SAFSSAQEAALSRGDVDVVVHSLKDLPTANPAGLVLLPPPGREDVRDALC---GSTLAGL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GT + RR A LL R D+ V+ RG + RL K+ A++LA AG++RL Sbjct: 122 RKGARVGTGAPRRVAQLLAVRPDLVVVPIRGNVPPRLKKIETMGLDAVVLAVAGLRRLGL 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNN--PKAQELVKVINHEDTWDSVNCERAFLAE 239 + I ++L ++ FPPSPGQGA+ I+ ++ ++L+ + +V ERA LAE Sbjct: 182 DDAIGDVLPLDLFPPSPGQGALGIQVRTDDHSAPLRDLLSTVGDASADAAVRAERALLAE 241 Query: 240 LDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L G C + +A L G V + DG+ + G + +G A + Sbjct: 242 LHGGCSVPVGAYAEPLPNGELSLAGQVTSLDGRERVAGTLTGPATEPEKLGASLAALLID 301 Query: 299 ISNKNVFN 306 + + Sbjct: 302 RGAHAILD 309 >gi|159906164|ref|YP_001549826.1| porphobilinogen deaminase [Methanococcus maripaludis C6] gi|159887657|gb|ABX02594.1| porphobilinogen deaminase [Methanococcus maripaludis C6] Length = 304 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 84/296 (28%), Positives = 134/296 (45%), Gaps = 11/296 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+ L D+ II + T GD+ N+ L ++G G+FT Sbjct: 3 LRIGTRGSTLAMIQTEYIAGLLNDL----GVETEIIIVKTTGDKDQNKKLVDLG-IGVFT 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ K++ EID AVHS KD+PT LQI+A RE D+ I Sbjct: 58 KELDNKMLENEIDIAVHSLKDVPTLWSDELQIAATPKRESPDDIIIWRKDSDFDIEHDEL 117 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS+RR + L +++ RG + TR++KL + I++A AG+ R + Sbjct: 118 NVGTSSIRRTSFLQFTHPNLTPKLLRGNVATRIDKLRKGEYDTIIMAKAGLIRQGIDLSE 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +E P+P QG I + + + K E+++ I + T+ ER L E G C+ Sbjct: 178 FNYKKLEI-LPAPAQGVIGVASRKADAKINEILEKICDKKTYIEATAERWALKEYGGGCQ 236 Query: 246 SAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYI 296 + FA + L ++ G I S G D + + ++ + Sbjct: 237 APFGAFANYDTEAGILNLRCELVDEQGTIKRVKSNEGFIFCNTDDVELAKELGARV 292 >gi|254387445|ref|ZP_05002684.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064] gi|326443531|ref|ZP_08218265.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064] gi|197701171|gb|EDY46983.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064] Length = 329 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 90/308 (29%), Positives = 140/308 (45%), Gaps = 11/308 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG---GK 61 + +G+R S LA A E L + + P + GDR TL+ + G Sbjct: 3 TYFVGSRASNLAKAQVREYLRPLRE--RFPEITFTHRVILEGGDRDRTSTLSAVSAVNGG 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 F+ E L G++D VHS KD+PT GL + RED+RD +L L Sbjct: 61 SAFSSAQEAALSRGDVDVVVHSLKDLPTANPAGLVLLPPPGREDVRDALC---GSTLAGL 117 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GT + RR A LL R D+ V+ RG + RL K+ A++LA AG++RL Sbjct: 118 RKGARVGTGAPRRVAQLLAVRPDLVVVPIRGNVPPRLKKIETMGLDAVVLAVAGLRRLGL 177 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNN--PKAQELVKVINHEDTWDSVNCERAFLAE 239 + I ++L ++ FPPSPGQGA+ I+ ++ ++L+ + +V ERA LAE Sbjct: 178 DDAIGDVLPLDLFPPSPGQGALGIQVRTDDHSAPLRDLLSTVGDASADAAVRAERALLAE 237 Query: 240 LDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L G C + +A L G V + DG+ + G + +G A + Sbjct: 238 LHGGCSVPVGAYAEPLPNGELSLAGQVTSLDGRERVAGTLTGPATEPEKLGASLAALLID 297 Query: 299 ISNKNVFN 306 + + Sbjct: 298 RGAHAILD 305 >gi|150402047|ref|YP_001329341.1| porphobilinogen deaminase [Methanococcus maripaludis C7] gi|150033077|gb|ABR65190.1| porphobilinogen deaminase [Methanococcus maripaludis C7] Length = 304 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 11/297 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA+ L D+ I+ + T GD+ + L ++G G+F Sbjct: 2 KLRIGTRGSTLAMVQTEYIAGLLNDL----GVETEIVIVKTTGDKDQTKKLVDLG-LGVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E++ K++ EID AVHS KD+PT LQI+A RE D+ I Sbjct: 57 TKELDSKMLENEIDIAVHSLKDVPTLWSDELQITATPKRESPDDIIIWRKDSDFDIEHDE 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +GTSS+RR + L +++ RG + TR++KL N + I++A AG+ R + Sbjct: 117 LDVGTSSIRRTSFLQFTHPNLTPKLLRGNVATRIDKLRNREYDTIIMAKAGLIRQGIDLS 176 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ P+P QG I + + + K E+++ I + T+ ER L E G C Sbjct: 177 EFNYTKLD-MLPAPAQGVIGVASRKADIKINEILEKICDKKTYIEATAERWALKEYGGGC 235 Query: 245 KSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYI 296 ++ FA + L ++ G I S G D + + ++ + Sbjct: 236 QAPFGAFAVYDTEDGILNLRCELVDEQGTIKRVKSNEGFVICTTDEVELAKELGARV 292 >gi|47224902|emb|CAG06472.1| unnamed protein product [Tetraodon nigroviridis] Length = 344 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 91/334 (27%), Positives = 138/334 (41%), Gaps = 49/334 (14%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIGTR S LA L +++ P ++ I+ +ST GD+I + L++IG K L Sbjct: 18 RVIRIGTRKSQLARIQTDSVAEKLKELY--PDVHLEIVAMSTTGDKILDTALSKIGEKSL 75 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A L RE+ D + H ++L Sbjct: 76 FTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVLKRENPHDAVVLHPKNAGKTLDA 135 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L HSVIGTSSLRR A L + +DF+ + + L H + +R Sbjct: 136 LPAHSVIGTSSLRRAAQLKKRFP---HLDFKDIVSSERCFLPVQPGHRCFFLSSRSQRGN 192 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +K++ EDF A +N + +++ ED +V E Sbjct: 193 LNTRLKKLDEKEDFAAIILAAAGLRRMGWDN----RISQILEPEDCMYAVGQE------- 241 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS--------RNGNRCD-------- 284 G C +A K S LY G V + DG + + +G+ + Sbjct: 242 -GGCSVPVAVHTKVKDSQLYLTGAVYSLDGSDSLKETMQTSVAAPADGSPDEVDECARVG 300 Query: 285 -------------AINIGRDAAQYIRFISNKNVF 305 A +G D A+ + K + Sbjct: 301 VTANKIPGEAQDRAERLGVDLAKLLLSKGAKEIL 334 >gi|48477321|ref|YP_023027.1| porphobilinogen deaminase [Picrophilus torridus DSM 9790] gi|55976421|sp|Q6L2G8|HEM3_PICTO RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|48429969|gb|AAT42834.1| porphobilinogen deaminase [Picrophilus torridus DSM 9790] Length = 282 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 95/257 (36%), Positives = 142/257 (55%), Gaps = 10/257 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+ A + L + + ++KGD + L IGG G+F Sbjct: 3 IRIGTRSSKLAMIQAMMVKDRLDSL----GIETEVKGFTSKGDINLDSPLYSIGGTGVFV 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +++ + ++ EID AVHSAKD+P+ + L+ISA L R+D RDV IS SL DL S Sbjct: 59 DDLNRMILKNEIDIAVHSAKDIPSFIDDSLEISAVLKRDDPRDVLISQH--SLNDLEASS 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSSLRR L R+DI + D RG I+TRL KL+N I++A A R+ + Sbjct: 117 VIGTSSLRRIKELKTLRNDILIKDLRGNIDTRLKKLDNGDYDGIIMAKAAYDRM-RINRR 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ILN +DF P+P QG I I + + +++K IN ++T++ + ER L+ L+ C Sbjct: 176 HFILNYDDFVPAPNQGIIAI-ISKKDSEINDVLKKINDDETYNDMKAERLILSGLNLGCS 234 Query: 246 SAIAGFAYCKGSTLYFY 262 + +A+ + ++ Sbjct: 235 KPVGIYAH--KNRIFMR 249 >gi|297627045|ref|YP_003688808.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922810|emb|CBL57388.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 310 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 90/303 (29%), Positives = 145/303 (47%), Gaps = 11/303 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++ +IGTR S LA + + T + + V +P ++ + T GD + L+ G Sbjct: 12 RRVLKIGTRGSRLARSQSAMTAALIEQVTGLP---TELVIVHTDGD-DLSIPLSAPPRPG 67 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 F + L+ GE+D AVHS KD+P + GL + A R D +S A L +L Sbjct: 68 AFVARLRDVLLDGEVDIAVHSFKDLPFAPMPGLSVVAVPQRAAALDALVSRDALGLDELP 127 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S +GTSS RR + LLR+R D+ ++ RG ++TR+ K+ + A +LA AG++RL Sbjct: 128 AGSKVGTSSPRRASALLRYRDDLEIVPIRGNVDTRIRKVREGRVDAAVLAAAGLERLGLH 187 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E+++ + P+P QGA+ +E ++P V IN DT V ER L + Sbjct: 188 DEITELIDPKVIVPAPAQGALAVEMRTDDP-LAATVAQINDHDTRIQVAAERQVLTGVQA 246 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN------GNRCDAINIGRDAAQYI 296 +C +AI + +G +L + G V+R DA +G A+ + Sbjct: 247 TCTTAIGAHSVLQGYSLTLMADLTDHMGVAHAHVARTIGLRRGDPTDDARALGESVAEQL 306 Query: 297 RFI 299 Sbjct: 307 LER 309 >gi|160937983|ref|ZP_02085340.1| hypothetical protein CLOBOL_02876 [Clostridium bolteae ATCC BAA-613] gi|158438977|gb|EDP16732.1| hypothetical protein CLOBOL_02876 [Clostridium bolteae ATCC BAA-613] Length = 302 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 94/300 (31%), Positives = 136/300 (45%), Gaps = 18/300 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL L V P + I+ T GDRI ++ L E GGKG+F Sbjct: 4 IIRIGTRKSALALIQTQLVADELRQV--CPGIQVEIVTKDTLGDRILDKPLQEFGGKGVF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 E E+ + G ID AVHSAKD+P +L +GL I+A RED RDV ++ ++ Sbjct: 62 VSEFEQAIQEGVIDLAVHSAKDLPMELAQGLTIAAVSGREDPRDVLVTMRGHRIRP-ESV 120 Query: 125 SVIGTSSLRRKALLLRWRS-------DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 IGTSS RR+ RG + TRL KL I+LA AG+K Sbjct: 121 VRIGTSSPRRQLQARLMCKTLWPEAAGAECSTLRGNVHTRLRKLEEENFDGIILAAAGLK 180 Query: 178 RLKKEKVIKEILN---IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 RL + E+F P+ GQG + +E A L + ++H ++ ER Sbjct: 181 RLGLLEQDTYEYTFLAPEEFIPAGGQGLMAVEAKAG-TAAHSLAQAMDHAQGRLCLDLER 239 Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDA 292 + L +LD C I ++ + L +G + + + + G +R D + +A Sbjct: 240 SVLKQLDAGCHEPIGIYSVLQNGQLEVWG-ISSP-REEVKRIHLTGGTSRRDIEKLASEA 297 >gi|167814759|ref|ZP_02446439.1| porphobilinogen deaminase [Burkholderia pseudomallei 91] Length = 240 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 88/230 (38%), Positives = 135/230 (58%), Gaps = 2/230 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 I+ +L+++D P+ GQGA+ IE + ++ + +V ER Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAER 240 >gi|327539486|gb|EGF26101.1| porphobilinogen deaminase [Rhodopirellula baltica WH47] Length = 315 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 89/313 (28%), Positives = 140/313 (44%), Gaps = 29/313 (9%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + A L I+PL +KGD R + GLFT+ I++ L+ E Sbjct: 1 MWQAEHVAKLLKKH----GFQTEIVPLVSKGDTDM-RPIDGTRQVGLFTKRIQQALVDDE 55 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS-----------LKDLALHS 125 D AVHS KD+PT+ ++A PRE + D + L L + Sbjct: 56 ADVAVHSLKDLPTEPDSRFVLAAVPPRESVLDALVFADNSPHLEPQTGAESPLDYLPQGA 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT S RR A L + R D+ V+ RG ++TRL KLN + AI+LA+AGI RL+ + Sbjct: 116 RVGTGSTRRLAQLKQLRPDLEVLPIRGNVQTRLAKLNAGEFDAIVLAHAGILRLEMTDLP 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + +++ P+PGQGA+ IE ++ A + +N + ER L+EL G C Sbjct: 176 HRLFPLDEMIPAPGQGALGIEVRSDDAGAMHAIANLNDAAARLAATAERKVLSELHGGCL 235 Query: 246 SAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNGN---------RCDAINIGRDA 292 + IA A + G+ L IV+++DG+ + +A +G Sbjct: 236 APIACHAKLETSNHGTELCLRAIVMSADGEQRLQEDARITVQPNDADLHVAEAHELGTLV 295 Query: 293 AQYIRFISNKNVF 305 A+ +R + Sbjct: 296 AKRLRDKGADKLI 308 >gi|326802537|ref|YP_004320356.1| porphobilinogen deaminase [Sphingobacterium sp. 21] gi|326553301|gb|ADZ81686.1| Porphobilinogen deaminase [Sphingobacterium sp. 21] Length = 546 Score = 255 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 84/256 (32%), Positives = 139/256 (54%), Gaps = 10/256 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + IGTR S LAL A + L + + + T+GD I + L ++ GKG Sbjct: 3 RTLIIGTRGSDLALWQANHVKDRLATI----GVQAELKVIKTQGDNIQHLRLDKLEGKGF 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----QSLK 119 FT+E+E++L++ +ID AVHS KD+PT GL+I+A RED ++ I + Sbjct: 59 FTKELEEELLAEKIDIAVHSHKDLPTANPPGLRIAAVSEREDPSELLIILKDCVDLKKRL 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR- 178 + ++++GTSS RRKA LL +R D+ + D RG + TRL KL + K AI+LA AG++R Sbjct: 119 SVKHNAIVGTSSNRRKAQLLAFRPDLEIEDLRGNVNTRLQKLRDEKYDAIMLAKAGVERL 178 Query: 179 -LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 L + EI+ + P+P QG + I+ ++ E+++ ++ +D +++ ER L Sbjct: 179 KLDLSEFHVEIIPPTEIIPAPAQGVLAIQIRESDHTLYEVLQKLHQKDVAETIGVERKVL 238 Query: 238 AELDGSCKSAIAGFAY 253 +G C + + Sbjct: 239 NLFEGGCHMPLGCYCR 254 >gi|221059912|ref|XP_002260601.1| Porphobilinogen deaminase [Plasmodium knowlesi strain H] gi|193810675|emb|CAQ42573.1| Porphobilinogen deaminase, putative [Plasmodium knowlesi strain H] Length = 449 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 97/374 (25%), Positives = 162/374 (43%), Gaps = 71/374 (18%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVI--IPLSTKGDRITNRTLTEIGGK 61 K IGTR SPLA+ + + R+ L K N+ I + T GD I ++ + GGK Sbjct: 65 KEIIIGTRDSPLAIKQSEKVRTKLEAYFKKVNKNVKITLKSIKTMGDNILDQKVDLFGGK 124 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT+E++++LI G++ VHS KD+P +L + +Q+S +L R+ I D F+S +L+D+ Sbjct: 125 GIFTKELDEELIKGKVHICVHSLKDVPMELPEQVQLSCFLKRDTINDAFLSVKYGTLEDM 184 Query: 122 ---------------ALH------------------------SVIGTSSLRRKALLLRWR 142 IGTSSLRR + + Sbjct: 185 NKMKMANKMEEGSYQPKGMSQRVINQNVKRDNYEGDHYDNFIPTIGTSSLRRSSQIKYKY 244 Query: 143 SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL----------------------- 179 +++V + RG I TR+ KL N + AI++A G++RL Sbjct: 245 KNVAVKNMRGNINTRIAKLCNGQYDAIIIAKCGLERLTTKKGIRNIIGGKNKVTPKNFLI 304 Query: 180 -------KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 + + +N P+ QG I + +H ++ +++K IN E N Sbjct: 305 NYNNTEINLTSLHIQQINKRTIYPALCQGIIAVSSHKSDKYISDVLKNINDEKAQIMANI 364 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292 ER+FL +++G+C I G+A + F ++ G+ + V G I A Sbjct: 365 ERSFLYQIEGNCMMPIGGYAKIVNGEIVFNAVINDIHGREKYHVREVGKVESYNEIAVMA 424 Query: 293 AQYIRFISNKNVFN 306 A ++ + FN Sbjct: 425 ATKMKEKIGTHRFN 438 >gi|217077158|ref|YP_002334874.1| porphobilinogen deaminase [Thermosipho africanus TCF52B] gi|217037011|gb|ACJ75533.1| porphobilinogen deaminase [Thermosipho africanus TCF52B] Length = 280 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 97/259 (37%), Positives = 134/259 (51%), Gaps = 8/259 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 ++GTR S LAL L K+ + +IP+ TKGD I + + EIGGKG+F Sbjct: 2 KIKVGTRGSKLALIQTNMVVERLKS--KLSNVSFEVIPIKTKGD-IVKKPVGEIGGKGVF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +IEK L++GEID A+HS KDMP+K+ GL +++ L RED RDVF+ L L Sbjct: 59 VSDIEKLLLNGEIDIAIHSMKDMPSKIPDGLYLTSVLKREDARDVFVGKKDFFL--LESG 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGTSS RR L R DI ++ RG ++TRL ++ + I+LA AG+KRL EK Sbjct: 117 AKIGTSSKRRMLQLSILRPDIEIVPIRGNVDTRLKRI--GELDGIVLAAAGLKRLGLEKK 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDGS 243 I +IE P+P QG + +E E VK I DT ER L+ Sbjct: 175 ITNYFSIEQVVPAPCQGILALEFTSKFLPLFEKVKDEIVDPDTEFVSKIERKVLSISGFD 234 Query: 244 CKSAIAGFAYCKGSTLYFY 262 C + + L F+ Sbjct: 235 CNTPFGFYCEKNDDNLVFH 253 >gi|239624018|ref|ZP_04667049.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Clostridiales bacterium 1_7_47_FAA] gi|239522049|gb|EEQ61915.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Clostridiales bacterium 1_7_47FAA] Length = 301 Score = 254 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 94/308 (30%), Positives = 137/308 (44%), Gaps = 24/308 (7%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR S LAL L P + ++ T GD+I ++ L E GG Sbjct: 1 MSN-IIRIGTRKSALALIQTHLIADGLKRA--WPDIEVELVTKETLGDKILDKPLQEFGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG+F E E+ + G ID AVHSAKD+P +L +GL I+A R D RDV ++ Sbjct: 58 KGVFVSEFEQAMKEGAIDLAVHSAKDLPMELGEGLVIAAVSGRGDPRDVLVTMKGSPKD- 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSD-------ISVIDFRGKIETRLNKLNNNKAHAILLAY 173 H VIGTSS RR+ + +R ++ RG + TRL KL I+LA Sbjct: 117 -REHIVIGTSSPRRQLEAVEYRGQLWPGAASLTCATLRGNVHTRLRKLEEGLYDGIILAA 175 Query: 174 AGIKRLKKEKVIKE---ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 AG++RL L+ F P+ GQG + +E + A L + I+ + + Sbjct: 176 AGLERLDLLGNPSYDFKYLDPTVFIPAGGQGIMAVEAREGS-DAARLCQAIDSREGRLCL 234 Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD------ 284 ER L LD C I ++ + +G + D ++ +S G + Sbjct: 235 TLERMVLKLLDAGCHEPIGIYSNIMDGKMEVWG-ISRPD-RVTRRISLEGAVTEKELEAL 292 Query: 285 AINIGRDA 292 A+ GR Sbjct: 293 ALQAGRGL 300 >gi|291295782|ref|YP_003507180.1| porphobilinogen deaminase [Meiothermus ruber DSM 1279] gi|290470741|gb|ADD28160.1| porphobilinogen deaminase [Meiothermus ruber DSM 1279] Length = 300 Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 81/268 (30%), Positives = 140/268 (52%), Gaps = 12/268 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LAL A + L + + ++ + T+GDR + R ++ G+G FT Sbjct: 4 VRIATRGSRLALWQAGWVQQQLERLGA----QVELVVVETQGDRES-RPFAQMQGQGFFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-----AQSLKD 120 + ++ +++ E D AVHS KD+P+ +GL+I+A RED R++ + A Sbjct: 59 KAVQDAVLNWEADLAVHSFKDLPSARPEGLEIAAVPKREDPRELLLVRPEALDEAAPGLP 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++ GTS+ RR+A L + R D+ + + RG + TR++KL + AILLAYAG+KRL+ Sbjct: 119 LRSGALAGTSAARRQAQLRQLRPDLGLKELRGNVPTRVDKLRCGEYDAILLAYAGLKRLE 178 Query: 181 KE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + ++L P+P QGA+ +E ++ + + L++ ++ +V ER + Sbjct: 179 LDLSGLYTQVLPTTVLVPAPAQGALALECRSDDHRLKALLQPLDDPQARRTVEAERGLMQ 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVL 266 +L G C+ A+ A L Sbjct: 239 KLAGGCQLALGALAQAGPQGLMLLAWYG 266 >gi|333025240|ref|ZP_08453304.1| putative porphobilinogen deaminase [Streptomyces sp. Tu6071] gi|332745092|gb|EGJ75533.1| putative porphobilinogen deaminase [Streptomyces sp. Tu6071] Length = 307 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 21/281 (7%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 +A + ++ + ++ ++ ++T GD + L IGG G+F + L+ G+ Sbjct: 1 MAQSGLVADAVREAT---GRSVELVEITTYGDT-SREHLARIGGTGVFVTALRDALLRGD 56 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 +D AVHS KD+PT +GL ++A RED RD I+ +L+ L + IGT S RR A Sbjct: 57 VDFAVHSLKDLPTAQPEGLALAAVPRREDPRDALIARDGLTLERLPRGARIGTGSPRRMA 116 Query: 137 LL----LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192 L DI + RG ++TR+N + + + A++LA AG+ RL + + L + Sbjct: 117 QLNAHARAHGLDIETVPIRGNVDTRINFVRDGELDAVVLAAAGLNRLGRGGEVTAYLASD 176 Query: 193 DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252 P+PGQGA+ +E E + ++ T +V ERA LA L+ C + + A Sbjct: 177 TVLPAPGQGALAVECPPG--PLAEALARLDDPRTRAAVTAERALLAALEAGCSAPVGALA 234 Query: 253 YCKG-----------STLYFYGIVLASDGKIFHEVSRNGNR 282 G + + G+V ++DG +++ G+ Sbjct: 235 DFTGAPQDQAAQRQTTEMRLRGVVGSTDGSELVQLTTTGHV 275 >gi|108804800|ref|YP_644737.1| porphobilinogen deaminase [Rubrobacter xylanophilus DSM 9941] gi|123069014|sp|Q1AUK3|HEM3_RUBXD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|108766043|gb|ABG04925.1| porphobilinogen deaminase [Rubrobacter xylanophilus DSM 9941] Length = 305 Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 90/302 (29%), Positives = 151/302 (50%), Gaps = 7/302 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR SPLALA A + L + + + T DR + L+ I + +FT Sbjct: 5 LVLGTRGSPLALAQAEACAAGLRAA----GFAVELRRIRTTSDRRPDDPLSVIDQRDVFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++++ L++GE+D AVHS KD+PT++ +G+ ++A R D D +S + L + Sbjct: 61 RQLDEALLAGEVDLAVHSMKDVPTEVPEGIVLAAVAGRADPSDALVSEGGWGVDGLPEGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 + TSSLRR+A LL R D+ V++ RG ++TR+ K+ A A++LA AG+ RL E V Sbjct: 121 RVATSSLRRRAQLLHRRPDLRVVEIRGNVDTRIRKMRAGAAEAVVLARAGLVRLGLE-VP 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ + P+ GQGA+ + +P+ +E+ + +N V ERA L L+G C+ Sbjct: 180 HAVIPHDVLLPAVGQGALAVAVRRGDPRLEEIRRALNDPAAEREVAAERALLRALEGGCR 239 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + A G + G+V++ DG G + + R A + + Sbjct: 240 VPVGARAVAGGRGVLLRGVVVSPDGAALCGGEERGEEPEEVG--RRLAARLLERGAAGIL 297 Query: 306 NF 307 F Sbjct: 298 GF 299 >gi|289581680|ref|YP_003480146.1| porphobilinogen deaminase [Natrialba magadii ATCC 43099] gi|289531233|gb|ADD05584.1| porphobilinogen deaminase [Natrialba magadii ATCC 43099] Length = 378 Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 91/360 (25%), Positives = 151/360 (41%), Gaps = 60/360 (16%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + R+ TR S LA A + +L + + + ++ + T GD+I + + +G Sbjct: 3 TRGTLRLATRGSTLARRQATLVKEALENRR----YEVELVTVETTGDQIRDELIHRLGKT 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G F E++++++ G++D A+HS KDMPT+ L +A R D I+ +L++L Sbjct: 59 GAFVRELDERVLEGDLDGAIHSMKDMPTEQPDDLVTAAVPERGRPGDYLITPEGATLEEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-------------------- 161 + +GTSSLRR+A LL R D++V RG ++TRL KL Sbjct: 119 PQGATVGTSSLRRRAQLLSERPDLTVEPLRGNVDTRLEKLLAPSLQAEHEERSEADKERK 178 Query: 162 -------NNNKAH---------------------------AILLAYAGIKRLKKEK-VIK 186 + AI+LA AG+ R + V Sbjct: 179 GNTGEEDFEPEFDQTVDEWFDGLSELEKQALGREVETEYDAIVLAQAGLVRSGLDHYVDA 238 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + L F P+PGQGA+ + + A E+ I+H + ER LAEL G C + Sbjct: 239 QELPTGTFVPAPGQGALAVTA-TDGETATEIQSAIDHPRSRVETTVERTVLAELGGGCIA 297 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 I +A +G ++ V DG+ +R+ + R+ AQ + + Sbjct: 298 PIGIYAIVQGEYVHATVSVFNRDGEESVAATRDLPVENHATAAREFAQDLADRGAAELIE 357 >gi|323475281|gb|ADX85887.1| porphobilinogen deaminase [Sulfolobus islandicus REY15A] gi|323478006|gb|ADX83244.1| porphobilinogen deaminase [Sulfolobus islandicus HVE10/4] Length = 293 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 95/302 (31%), Positives = 150/302 (49%), Gaps = 12/302 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI R S L+ L + II + TK D + L+++G KG+F Sbjct: 2 KIRIAARGSKLSRIQVDMLGEKLKKI----GIEYEIINIKTKADLFSTEPLSKLG-KGVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ + ++ G+ D AVHS KD+ +++ L+I A L R+ D+ I+ ++L L + Sbjct: 57 EKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFAVLERDPPYDILIAE--KNLDKLDSN 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IGTSS+RRK L + +I+ D RG ++TR+ K + + ++LA A +KRL + Sbjct: 115 ITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIRKYLSKEYQGLILAEASLKRLNMT-M 173 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 LN+ DF P QG I + K +E+ K INH+DT D ERA ++ + G C Sbjct: 174 NYHRLNVYDFTPEANQGIIVALGRKKDEKIKEIFKEINHKDTLDEALAERAVISLVGGGC 233 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI-RFISNKN 303 S I +G FYGI SDGK VS + D IG + + + + N++ Sbjct: 234 HSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS-KPGDPYTIGSELGLLLKKEMKNED 290 Query: 304 VF 305 + Sbjct: 291 II 292 >gi|227828214|ref|YP_002829994.1| porphobilinogen deaminase [Sulfolobus islandicus M.14.25] gi|229585443|ref|YP_002843945.1| porphobilinogen deaminase [Sulfolobus islandicus M.16.27] gi|259646265|sp|C3MZR8|HEM3_SULIA RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|259709751|sp|C3MYD9|HEM3_SULIM RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|227460010|gb|ACP38696.1| porphobilinogen deaminase [Sulfolobus islandicus M.14.25] gi|228020493|gb|ACP55900.1| porphobilinogen deaminase [Sulfolobus islandicus M.16.27] Length = 293 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 96/302 (31%), Positives = 150/302 (49%), Gaps = 12/302 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI R S L+ L + II + TK D + L+++G KG+F Sbjct: 2 KIRIAARGSKLSRIQVDMLGEKLKKI----GIEYEIIDIKTKADLFSTEPLSKLG-KGVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ + ++ G+ D AVHS KD+ +++ L+I A L R+ D+ I+ ++L L + Sbjct: 57 EKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFAVLERDPPYDILIAE--KNLDKLDSN 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IGTSS+RRK L + +I+ D RG ++TR+ K + + ++LA A +KRL + Sbjct: 115 ITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIRKYLSKEYQGLILAEASLKRLNMT-M 173 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 LN+ DF P QG I + K +E+ K INH+DT D ERA ++ + G C Sbjct: 174 NYHRLNVYDFTPEANQGIIVALGRKKDEKIKEIFKEINHKDTLDEALAERAVISLVGGGC 233 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI-RFISNKN 303 S I +G FYGI SDGK VS + D IG + + + + N+N Sbjct: 234 HSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS-KPGDPYTIGSELGLLLKKEMKNEN 290 Query: 304 VF 305 + Sbjct: 291 II 292 >gi|229581489|ref|YP_002839888.1| porphobilinogen deaminase [Sulfolobus islandicus Y.N.15.51] gi|259709752|sp|C3NF70|HEM3_SULIN RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|228012205|gb|ACP47966.1| porphobilinogen deaminase [Sulfolobus islandicus Y.N.15.51] Length = 293 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 95/302 (31%), Positives = 150/302 (49%), Gaps = 12/302 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI R S L+ L + II + TK D + L+++G KG+F Sbjct: 2 KIRIAARGSKLSRIQVDMLGEKLKKI----GIEYEIIDIKTKADLFSTEPLSKLG-KGVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ + ++ G+ D AVHS KD+ +++ L+I A L R+ D+ I+ ++L L + Sbjct: 57 EKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFAVLKRDPPYDILIAE--KNLDKLDSN 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IGTSS+RRK L + +I+ D RG ++TR+ K + + ++LA A +KRL + Sbjct: 115 ITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIRKYLSKEYQGLILAEASLKRLNMT-M 173 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 LN+ DF P QG I + K +E+ K INH+DT D ERA ++ + G C Sbjct: 174 NYHRLNVYDFTPEANQGIIVALGRKKDEKIKEIFKEINHKDTLDEALAERAVISLVGGGC 233 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI-RFISNKN 303 S I +G FYGI SDGK VS + D IG + + + + N++ Sbjct: 234 HSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS-KPGDPYTIGSELGLLLKKEMKNED 290 Query: 304 VF 305 + Sbjct: 291 II 292 >gi|118576540|ref|YP_876283.1| porphobilinogen deaminase [Cenarchaeum symbiosum A] gi|118195061|gb|ABK77979.1| porphobilinogen deaminase [Cenarchaeum symbiosum A] Length = 311 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 92/303 (30%), Positives = 137/303 (45%), Gaps = 6/303 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 + +GTR S L+LA +L + + P + + T+GD +R L I KG+F Sbjct: 4 YTVGTRGSRLSLAQTGHVLDALKEAN--PEDEYKVRRIKTQGDTD-DRPLFAIDQKGIFE 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EI++ + G D AVHS KD+PT+L GL ++ R DV +S L L + Sbjct: 61 KEIDRAVSEGGADFAVHSLKDVPTELAPGLVLACVPRRAAANDVLVSPGGSGLGSLPRGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR + R RSD+ V RG IETR+ K+ A++LA AGI RL V Sbjct: 121 TVGTSSLRRAVQVGRSRSDLHVKPVRGNIETRIAKVGAG-YDAVVLAEAGISRLGL-DVK 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L E F PSPGQG++ + + ++ I + ERA + C+ Sbjct: 179 YAALPEESFAPSPGQGSLALVARSGDAGTISMLNRIEDAASRAEAEAERALSERIGSGCR 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV- 304 + A G L + DG V +G R +G A + ++ Sbjct: 239 FPVGALARSAGELLTIRAEAFSVDGSRSVSVQASGPRGSPRKVGESAGNEMLERGAGDLA 298 Query: 305 FNF 307 N+ Sbjct: 299 LNW 301 >gi|255513653|gb|EET89918.1| porphobilinogen deaminase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 301 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 97/310 (31%), Positives = 147/310 (47%), Gaps = 15/310 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLST---KGDRITNRTLTE 57 M + IGTR S LA+A A R+ L + P + I+ + T K DR RT Sbjct: 1 MSESEITIGTRGSELAVAQAEIVRNKLAAIE--PRISFRIVKIKTLNEKVDRSKART--- 55 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 K ++T+EI++ ++ ID AVHS KD+ + + +QI A R+D RDVFI +T Sbjct: 56 --EKDIYTKEIDEAILERRIDIAVHSLKDLKFNMDENMQIGAVPDRDDPRDVFIGNTETE 113 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 + L +++GTSS+RR+ L R + D G I+TRL+KLN+ + I++A AG+K Sbjct: 114 FEHLGTDALVGTSSIRRRVQLTRINPKPMISDLHGNIDTRLSKLNSGEFSGIVIAAAGVK 173 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL + V + + D P+ GQGAI + H +N A EL+K I++ V E F Sbjct: 174 RLG-KAVRMQYFDERDVVPAIGQGAIAVTVHKDNSAAAELLKRIDNMKARVEVGEEIEFG 232 Query: 238 AELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C I A + + G V GK + A G+ A+ + Sbjct: 233 KAFGTGCNLPIGANAKMLESGKIGIVGFVSDLAGKTLVKGETETGPGHA---GKSLAELL 289 Query: 297 RFISNKNVFN 306 N+ Sbjct: 290 IKKGAGNLIE 299 >gi|227830973|ref|YP_002832753.1| porphobilinogen deaminase [Sulfolobus islandicus L.S.2.15] gi|238620405|ref|YP_002915231.1| porphobilinogen deaminase [Sulfolobus islandicus M.16.4] gi|284998461|ref|YP_003420229.1| porphobilinogen deaminase [Sulfolobus islandicus L.D.8.5] gi|259709727|sp|C4KIZ9|HEM3_SULIK RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|259709750|sp|C3MJ21|HEM3_SULIL RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|227457421|gb|ACP36108.1| porphobilinogen deaminase [Sulfolobus islandicus L.S.2.15] gi|238381475|gb|ACR42563.1| porphobilinogen deaminase [Sulfolobus islandicus M.16.4] gi|284446357|gb|ADB87859.1| porphobilinogen deaminase [Sulfolobus islandicus L.D.8.5] Length = 293 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 95/302 (31%), Positives = 150/302 (49%), Gaps = 12/302 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI R S L+ L + II + TK D + L+++G KG+F Sbjct: 2 KIRIAARGSKLSRIQVDMLGEKLKKI----GIEYEIIDIKTKADLFSTEPLSKLG-KGVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ + ++ G+ D AVHS KD+ +++ L+I A L R+ D+ I+ ++L L + Sbjct: 57 EKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFAVLERDPPYDILIAE--KNLDKLDSN 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IGTSS+RRK L + +I+ D RG ++TR+ K + + ++LA A +KRL + Sbjct: 115 ITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIRKYLSKEYQGLILAEASLKRLNMT-M 173 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 LN+ DF P QG I + K +E+ K INH+DT D ERA ++ + G C Sbjct: 174 NYHRLNVYDFTPEANQGIIVALGRKKDEKIKEIFKEINHKDTLDEALAERAVISLVGGGC 233 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI-RFISNKN 303 S I +G FYGI SDGK VS + D IG + + + + N++ Sbjct: 234 HSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS-KPGDPYTIGSELGLLLKKEMKNED 290 Query: 304 VF 305 + Sbjct: 291 II 292 >gi|1749684|dbj|BAA13899.1| unnamed protein product [Schizosaccharomyces pombe] Length = 335 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 89/315 (28%), Positives = 143/315 (45%), Gaps = 19/315 (6%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG---GKGLF 64 IGTR S LA+ H R L P II T GD I ++ E K L+ Sbjct: 9 IGTRKSKLAVIHQNY-REELEK--HNPHLEFPIISRDTIGDEILSKAWLEFKRQLAKSLW 65 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T E+E L++ + VHS KD+P++ + I+ R D + +++ DL Sbjct: 66 TRELEALLVTNQCRILVHSLKDLPSENARWYGIACIPKRSCPLDAIVFKAGSHYKTVADL 125 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRL 179 SV+GTSS+RR+ALL R + +D RG + TRL KL +++ ++LA AG+ RL Sbjct: 126 PPGSVVGTSSIRRRALLARNFPHLRFVDIRGNVGTRLAKLDAPDSQFDCLVLAAAGLFRL 185 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I ++L + GQGA+ +E ++ + E++K + H++T + ERA + Sbjct: 186 GLKDRIAQMLTAPFVYYAVGQGALAVEVRADDKEMIEMLKPLQHQETLYACLAERALMKR 245 Query: 240 LDGSCKSAIA----GFAYCKGS-TLYFYGIVLASDGKIFH---EVSRNGNRCDAINIGRD 291 L G C I A S + G VL++DG + + +A +G Sbjct: 246 LQGGCAIPIGVQTDVLAISNSSYRISLLGTVLSADGLRAAFGNAEAVVSSEEEAEELGIT 305 Query: 292 AAQYIRFISNKNVFN 306 A + + Sbjct: 306 VALALLKNGAGPILE 320 >gi|229579851|ref|YP_002838250.1| porphobilinogen deaminase [Sulfolobus islandicus Y.G.57.14] gi|259709753|sp|C3N841|HEM3_SULIY RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|228010566|gb|ACP46328.1| porphobilinogen deaminase [Sulfolobus islandicus Y.G.57.14] Length = 293 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 95/302 (31%), Positives = 150/302 (49%), Gaps = 12/302 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI R S L+ L + II + TK D + L+++G KG+F Sbjct: 2 KIRIAARGSKLSRIQVDMLGEKLKKI----GIEYEIIDIKTKADLFSTDPLSKLG-KGVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ + ++ G+ D AVHS KD+ +++ L+I A L R+ D+ I+ ++L L + Sbjct: 57 EKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFAVLERDPPYDILIAE--KNLDKLDSN 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IGTSS+RRK L + +I+ D RG ++TR+ K + + ++LA A +KRL + Sbjct: 115 ITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIRKYLSKEYQGLILAEASLKRLNMT-M 173 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 LN+ DF P QG I + K +E+ K INH+DT D ERA ++ + G C Sbjct: 174 NYHRLNVYDFTPEANQGIIVALGRKKDEKIKEIFKEINHKDTLDEALAERAVISLVGGGC 233 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI-RFISNKN 303 S I +G FYGI SDGK VS + D IG + + + + N++ Sbjct: 234 HSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS-KPGDPYTIGSELGLLLKKEMKNED 290 Query: 304 VF 305 + Sbjct: 291 II 292 >gi|296534852|ref|ZP_06897187.1| hydroxymethylbilane synthase [Roseomonas cervicalis ATCC 49957] gi|296264818|gb|EFH11108.1| hydroxymethylbilane synthase [Roseomonas cervicalis ATCC 49957] Length = 304 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 113/309 (36%), Positives = 154/309 (49%), Gaps = 14/309 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R G+R SPLAL L + + P +PLST GD R L E+GGKGLF Sbjct: 1 PLRAGSRASPLALRQTAMV---LAALGETPCLT---VPLSTSGDAEPRRRLAELGGKGLF 54 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD---- 120 +EI + L+ G ID AVHS KD+ T+L GL I+A LPRED RD + A ++ Sbjct: 55 AKEIHEALLDGRIDFAVHSLKDLETELPPGLVIAACLPREDARDALLLAPACPPEERALP 114 Query: 121 ---LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L + + IGT+S RR A L R D+ RG ++TRL++L A LLA AG+K Sbjct: 115 LGFLPVGARIGTASARRAAQLRHLRPDLRFGLLRGNVQTRLHRLEQGDFAATLLAMAGLK 174 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL IL+ E+ P+ GQG I I N +E + I+H T + ERA L Sbjct: 175 RLDLAARASRILSPEEMLPAAGQGVIAITARAGNEALREKLAGIDHAATRLAAAAERALL 234 Query: 238 AELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 A L+GSC++ + A L+ G+V DG +G +A IG + Sbjct: 235 AALEGSCRTPVGAHATLDAEGRLHLTGLVAREDGTFLLRRRLSGPASEAARIGATLGAEL 294 Query: 297 RFISNKNVF 305 R S ++ Sbjct: 295 RADSPADLL 303 >gi|726352|gb|AAC44323.1| porphobilinogen deaminase [Yersinia pestis] Length = 184 Score = 252 bits (644), Expect = 6e-65, Method: Composition-based stats. Identities = 83/186 (44%), Positives = 106/186 (56%), Gaps = 2/186 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178 Query: 181 KEKVIK 186 K Sbjct: 179 LGKPNS 184 >gi|229822489|ref|YP_002884015.1| porphobilinogen deaminase [Beutenbergia cavernae DSM 12333] gi|229568402|gb|ACQ82253.1| porphobilinogen deaminase [Beutenbergia cavernae DSM 12333] Length = 334 Score = 251 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 87/294 (29%), Positives = 135/294 (45%), Gaps = 23/294 (7%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIP---PHNIVIIPLSTKGDRITNRTLTEI 58 + R+GTR S LA + ++ + ++ ++T GD + +L + Sbjct: 18 STRTLRVGTRASALATTQSEWAGEAIAARVAAATGSDVEVELVRVTTTGD-VLTGSLASM 76 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GG G+F + + L+ G D AVHS KD+PT GL + A RED RDV + L Sbjct: 77 GGTGVFVTALREALLDGRCDVAVHSLKDLPTAAAPGLVLGAVPQREDPRDVLCARAGAGL 136 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 DL +GT S RR A L R R D+ ++D RG ++TRL++++ A++LA AG+ Sbjct: 137 ADLPAGGRVGTGSPRRAAQLRRARPDLEIVDIRGNVDTRLSRISPGKGDLDAVVLARAGL 196 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIET-HVNNPKAQELVKVINHEDTWDSVNCERA 235 RL + + E L+ P+PGQGA+ +E ++ + T +V ERA Sbjct: 197 ARLGRLDAVTEALDAGVMVPAPGQGALAVEAVDAAPDWLLAGLRAFDDAPTRLAVTAERA 256 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 LA L+ C + + A GS L V DA ++G Sbjct: 257 MLARLEVGCSAPVGALATLAGSQLLLRTSVG----------------EDAEDLG 294 >gi|227496731|ref|ZP_03927005.1| porphobilinogen deaminase [Actinomyces urogenitalis DSM 15434] gi|226833762|gb|EEH66145.1| porphobilinogen deaminase [Actinomyces urogenitalis DSM 15434] Length = 402 Score = 251 bits (643), Expect = 8e-65, Method: Composition-based stats. Identities = 88/377 (23%), Positives = 147/377 (38%), Gaps = 75/377 (19%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIP--PHNIVIIPLSTKGDRITNRTLTEIGGKG 62 R+GTR S LAL + L + ++ ++P+ T+GD L+++GG G Sbjct: 3 TVRLGTRGSALALTQSGLVARMLEQAAALAGQELHVELVPVRTRGDVDP-TALSQLGGVG 61 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKDL 121 +F + + L++GE D AVHS KD+PT + GL+I+A RED RDV + A L DL Sbjct: 62 VFATALREALLAGECDLAVHSYKDLPTAAVPGLRIAAVPAREDPRDVLCTRAATLGLHDL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--------------NNNKAH 167 + +GT S RR A LL R D++++ RG + TRL ++ Sbjct: 122 PAGARVGTGSPRRSAQLLAQRPDLTIVPIRGNVPTRLARVVGSVVSADGPMGATAEPDLD 181 Query: 168 AILLAYAGIKRLKKEKVIKEI---------------------------LNIEDFPPSPGQ 200 A +LA +G++RL E + P+ Q Sbjct: 182 AAILALSGMRRLGLEDYASQPLAARCGARSQVEVQGIPDGGSAAGSPATTEPWMLPAAAQ 241 Query: 201 GAICIETHV----NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-- 254 GA+ +ET P + +++ T + ER+ + L C + + A Sbjct: 242 GALAVETRDRVSCELPVLTVALALVDDPVTRACADAERSLMRCLAAGCAAPVGALARPLD 301 Query: 255 ------------------------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 + + +V + DG S G +A ++GR Sbjct: 302 VAGEPAAGRDLPTEPGTALEPGPDQAPAICLEALVASLDGTQLRRASATGTLEEAEDLGR 361 Query: 291 DAAQYIRFISNKNVFNF 307 A+ + + + Sbjct: 362 CVAERLLADGAAQITDL 378 >gi|300933794|ref|ZP_07149050.1| hypothetical protein CresD4_06949 [Corynebacterium resistens DSM 45100] Length = 355 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 79/282 (28%), Positives = 132/282 (46%), Gaps = 12/282 (4%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD--RITNRTLTEIG 59 ++ IGTR S LA + ++ + + + + T GD + + + +IG Sbjct: 26 SQRTLLIGTRRSQLATTQSGHVQAGITEQGWAS----ELHIVQTPGDASQASQIPVAQIG 81 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G+FTE + L + E D AVHS KD+PT R D R+V +S + LK Sbjct: 82 -VGVFTETLRNALAAKECDVAVHSFKDLPTA-PDKRFRIIVPERVDPREVLVSVDNRLLK 139 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL + +GTS+ RR + L R D+ ++ RG I++R+ ++ A++LA AG++R+ Sbjct: 140 DLPEGAKVGTSAPRRVSQLRAVRPDLEILPLRGNIDSRMGRVGT-DLDAVILARAGLERV 198 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E L+ P+P QGA+ +E ++ +A + V + H + ERA LA Sbjct: 199 GQLDRAAESLDPHVIMPAPAQGALAVEVRADDDEAWQAVLPLEHLPSHLMAAAERAVLAT 258 Query: 240 LDGSCKSAIAGFAYCKGS---TLYFYGIVLASDGKIFHEVSR 278 L+ C + +A + GS L V DG + Sbjct: 259 LEAGCSAPVAAHSEWTGSDHTELTISAGVFGMDGTKQLVDTV 300 >gi|164661463|ref|XP_001731854.1| hypothetical protein MGL_1122 [Malassezia globosa CBS 7966] gi|159105755|gb|EDP44640.1| hypothetical protein MGL_1122 [Malassezia globosa CBS 7966] Length = 530 Score = 251 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 91/391 (23%), Positives = 160/391 (40%), Gaps = 90/391 (23%) Query: 5 PFRIGTRCSPLALAHAFETRSSLM----------------------------------DV 30 + +R S LA+ A + + L D Sbjct: 89 TLVLSSRKSELAVRQATQVQMLLDTRYGRASPVFAPGADQWPSTEVANIRAFLRTFSPDQ 148 Query: 31 HKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG--LFTEEIEKKLISGEIDCAVHSAKDMP 88 + P + + ++T GD+ L IGG+G ++T+E+E L++G +D VHS KD+P Sbjct: 149 KDVRPVDFPVRTMATLGDQNLKSPLYVIGGEGRAIWTKELEVALMAGGVDAIVHSLKDVP 208 Query: 89 TKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDI 145 T + G++++A L RED RD + +SL+++ SVIGTSS+RR +LL R + Sbjct: 209 TTMPDGVELAAILEREDPRDALVVKENLPYKSLQEMPQGSVIGTSSVRRVSLLRRAYPHL 268 Query: 146 SVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAI 203 D RG I TRL KL+ + A++LA AG+KR+ E I ++ + GQG++ Sbjct: 269 MFSDVRGNINTRLAKLDAADGPYTALVLAAAGLKRMDLEHRITAYVSEPVMLHAVGQGSL 328 Query: 204 CIETH-------VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG------ 250 IE + + + +++ I++ ERA + ++G C + Sbjct: 329 AIEVRTPRGESAERDERIRRMIRSISNWRATWRCVAERALMHRMEGGCSIPLGVSTRFED 388 Query: 251 FAYCK--------------------------------GSTLYFYGIVLASDGKIFHEVSR 278 A + GS L ++++ DG + S Sbjct: 389 HADIEGLLNERNETPSEMASAGISRPDIRIAHEPPPQGSFLTMAAVIVSLDGTRMCKHSH 448 Query: 279 N---GNRCDAINIGRDAAQYIR-FISNKNVF 305 + DA +G A+ + + + + Sbjct: 449 TQLCRSEKDAEQLGILVAEELEHHQNARAIL 479 >gi|256833700|ref|YP_003162427.1| porphobilinogen deaminase [Jonesia denitrificans DSM 20603] gi|256687231|gb|ACV10124.1| porphobilinogen deaminase [Jonesia denitrificans DSM 20603] Length = 344 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 86/264 (32%), Positives = 135/264 (51%), Gaps = 18/264 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA A + T + + + + + T GD + +L +GG G+F Sbjct: 4 LRLGTRASALATAQSRATAALIAQAT---GVTVDLTHIRTDGD-VLTGSLATMGGAGVFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 I + L++G+ID AVHS KD+PT +G I RE+ +D S +SL L + Sbjct: 60 TAIRQALLAGDIDIAVHSLKDLPTTPHEGTTII-VPERENPQDALCSRHGESLAHLPHGA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL---------NNNKAHAILLAYAGI 176 ++GT S RR A LL R D+ ++D RG ++TRL ++ N A++LA AG+ Sbjct: 119 LVGTGSPRRAAQLLVARPDLRIVDIRGNVDTRLARVGLSTADKPHIRNDLDAVVLAAAGL 178 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVN----NPKAQELVKVINHEDTWDSVNC 232 +RL + VI E+L P+PGQGA+ IE + +P ++ ++H+ T +V Sbjct: 179 RRLGRAHVISELLPPTSMLPAPGQGALAIEVRHDMADHHPSILAGIRTLHHQPTAYAVAA 238 Query: 233 ERAFLAELDGSCKSAIAGFAYCKG 256 ERA L L+ C + + A Sbjct: 239 ERAVLRHLEAGCAAPVGALATMHN 262 >gi|302349001|ref|YP_003816639.1| Porphobilinogen deaminase [Acidilobus saccharovorans 345-15] gi|302329413|gb|ADL19608.1| Porphobilinogen deaminase [Acidilobus saccharovorans 345-15] Length = 298 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 81/297 (27%), Positives = 149/297 (50%), Gaps = 7/297 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 ++ TR S L+L L + + T+GD + +R L IG KG+F Sbjct: 3 KLKVATRGSKLSLEQVVIAMRFLEQRLG-ERVEYEPVIVKTRGDVMQDRPLFSIGVKGVF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS----LKD 120 +E+ + +++GE D AVHS KD+P++L + L+I+ PRE D + ++D Sbjct: 62 EKEVNRAVLNGEADVAVHSMKDLPSQLEEDLEIAMVPPREVPNDSLVIGAGSPEVTGVED 121 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +GTSS+RR A L + ++ RG ++TR+ KLN + + +L+A AG++RL Sbjct: 122 VPSGLSVGTSSVRRIAFLRHYNRNVITKVVRGNVDTRIAKLNRGEVNYLLMAEAGLRRLN 181 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + +L ++ FPP PGQG I + ++P +L++ + E T+ ER F+ + Sbjct: 182 IPQ-KRVMLPLDKFPPEPGQGIIAVVAPSSSP-LFDLLRRASDEVTYAMAMAERKFVELI 239 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C + I + +G L + DG++ + +G+ + I R+ + ++ Sbjct: 240 GAGCHTPIGAVSILEGGRLAMIAAAASPDGEVMNFARASGSLGEPERIARELVENLK 296 >gi|103488353|ref|YP_617914.1| porphobilinogen deaminase [Sphingopyxis alaskensis RB2256] gi|123379466|sp|Q1GP41|HEM3_SPHAL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|98978430|gb|ABF54581.1| porphobilinogen deaminase [Sphingopyxis alaskensis RB2256] Length = 315 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 103/304 (33%), Positives = 151/304 (49%), Gaps = 8/304 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR SPLA+A A ++L+ H + + I+P++ GDRI +R L E+GGK L+ Sbjct: 10 PLRIGTRASPLAMAQAHMAAAALIAAHGLAMAALEIVPMTATGDRIQDRALAEVGGKALW 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDL 121 T E++ L +G ID AVHS KD+ T + A L R D RD + Q + +L Sbjct: 70 TRELDAALDAGTIDVAVHSLKDVETLRDARFFLGAMLERADPRDRLVVREGIAAQKISEL 129 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSS RR A + R R D+ + RG + TRL KL +A A LLA AG++RL Sbjct: 130 PHGARLGTSSPRRAAQVRRLRPDLDTVLLRGNVATRLAKLAAGEADATLLAAAGLERLGM 189 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + E P+ QGAI IE ++ L+ I+H T +V ERA LA L Sbjct: 190 HDIGA-VQGTELLLPAASQGAIGIECRADDAATIALLAAIDHAPTHRAVAAERALLAVLG 248 Query: 242 GSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+S +A +A + L + + DG DA + + + Sbjct: 249 GDCRSPVAAYAEWQADGVLRLDAEIFSEDGADHVAGHVI--VTDAGVVA-ALGHRLLAEA 305 Query: 301 NKNV 304 ++ Sbjct: 306 PPSI 309 >gi|150020602|ref|YP_001305956.1| porphobilinogen deaminase [Thermosipho melanesiensis BI429] gi|149793123|gb|ABR30571.1| porphobilinogen deaminase [Thermosipho melanesiensis BI429] Length = 279 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 81/249 (32%), Positives = 129/249 (51%), Gaps = 8/249 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+GTR S LAL + L ++ +P + I P+ TKGDR + +IGGKG+F Sbjct: 2 KIRVGTRKSKLALIQTQLVVNKLKEL--LPNIDFEITPVVTKGDR-LKTPIDKIGGKGVF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +IEK ++ ++D A+HS KD+P+K+ L +++ L RE DVFI ++ +L Sbjct: 59 VSDIEKLILDDKLDIAIHSMKDLPSKIPDKLFLTSVLKRECPNDVFIGK--ENFFNLKKG 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGTSS RR + R DI ++ RG ++TR+ K+ + I++A AG+ RL + Sbjct: 117 AKIGTSSKRRALQINMLRPDIEIVPIRGNVDTRIKKI--GELDGIVIAAAGVIRLGLKDK 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPK-AQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + E P+P QG + +E K +E+ VI T ER L+ L+ Sbjct: 175 ITNLFEFEKIVPAPCQGILALEFSEKFLKPFEEIKDVIVDPKTEVETQIERKILSLLNFD 234 Query: 244 CKSAIAGFA 252 C + + Sbjct: 235 CNTPFGFYC 243 >gi|88854547|ref|ZP_01129214.1| porphobilinogen deaminase [marine actinobacterium PHSC20C1] gi|88816355|gb|EAR26210.1| porphobilinogen deaminase [marine actinobacterium PHSC20C1] Length = 290 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 142/292 (48%), Gaps = 11/292 (3%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 +A +L IIP+ST+GDR + +L+ IGG+G+F + L++GE Sbjct: 1 MAQTTTVARALESKT---GVETEIIPISTQGDR-STESLSTIGGQGVFANALRDALLAGE 56 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 D VHS KD+PT + GL I+A R D RDV + +L+ L + +GT S RR+A Sbjct: 57 CDVVVHSLKDLPTAEVPGLTIAAVPKRADERDVVCARDGLTLETLPAGARVGTGSPRRQA 116 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 L D+ V+D RG I++RL+K+ + A++LA AG+ R + + E L I +P Sbjct: 117 QLRSLYPDLEVVDLRGNIDSRLDKVTDGHLDAVILAAAGLARAGRSDAVTEHLGIAGWPT 176 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 +PGQGA+ IET K L V++H+ + + ER LA LD C + + A Sbjct: 177 APGQGALAIETRTGEEK---LAAVLDHKPSRTKTDAERYVLAFLDAGCSAPLGAHAVIDD 233 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCD----AINIGRDAAQYIRFISNKNV 304 L+ V A DG + S D A + A + ++ Sbjct: 234 GLLFLDARVYALDGSRYLTSSHALYVNDVEDPAREAAQRVADELLAQGAGDL 285 >gi|284166931|ref|YP_003405210.1| porphobilinogen deaminase [Haloterrigena turkmenica DSM 5511] gi|284016586|gb|ADB62537.1| porphobilinogen deaminase [Haloterrigena turkmenica DSM 5511] Length = 380 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 91/360 (25%), Positives = 151/360 (41%), Gaps = 60/360 (16%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + R+ TR S LA A + +L D + + ++ + T GD+I + + +G Sbjct: 3 TRGTLRLATRGSTLARRQASLVKEALEDRR----YEVELVTVETTGDQIRDELIHRLGKT 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G F E++++++ G++D AVHS KDMPT+ + L +A R DV I+ +L++L Sbjct: 59 GAFVRELDERVLEGDLDGAVHSMKDMPTEQPQDLVTAAVPERGPPGDVLITPDGSTLEEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-------------------- 161 + +GTSSLRR+A LL R D+ V RG ++TRL KL Sbjct: 119 PDGATVGTSSLRRRAQLLSERPDLEVEPLRGNVDTRLEKLLAPSLQEEHQERSEADKERK 178 Query: 162 -------NNNKA---------------------------HAILLAYAGIKRLKKEK-VIK 186 + AI+LA +G++R V Sbjct: 179 GNAGDDDYEPEYDRTVDEWFDDLSELERQAMEREVETEYDAIVLAQSGLERSGLAHSVDY 238 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L F P+PGQGA+ + + A+++ I+ + ER LAEL G C + Sbjct: 239 RELPTGTFVPAPGQGALAVTAR-DGETARDIQSAIDFPRSRVETTVERTILAELGGGCIA 297 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 + +A +G ++ V DG+ E SR+ R+ A+ + + Sbjct: 298 PVGIYAVVQGEYVHATVNVFDRDGEESVEGSRDLPVEAHAEAAREFARDLADRGAAELIE 357 >gi|312878897|ref|ZP_07738697.1| porphobilinogen deaminase [Aminomonas paucivorans DSM 12260] gi|310782188|gb|EFQ22586.1| porphobilinogen deaminase [Aminomonas paucivorans DSM 12260] Length = 301 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 94/286 (32%), Positives = 137/286 (47%), Gaps = 11/286 (3%) Query: 10 TRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIE 69 TR SPLA +L + + +ST GDR L GG G F + +E Sbjct: 5 TRGSPLARIQTRGWMDALESLGA----ETTLQAVSTHGDRDRTTPLPCFGGFGAFVKALE 60 Query: 70 KKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGT 129 +KL++GE D AVHS KD+P +GL ++ LPR + D+ ++ SL+ L + +G+ Sbjct: 61 EKLLAGEGDGAVHSLKDVPVAQPEGLVLAGVLPRGPVGDLLVTREGLSLETLPPGARVGS 120 Query: 130 SSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEIL 189 SSLRR A LR R D+ + RG ++TRL KL + A++LA AG++RL + L Sbjct: 121 SSLRRTAQGLRVRKDLRFLCCRGNVQTRLRKLEAGELDALILAEAGVRRLGLDLPGAVRL 180 Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 F +PGQGA+ +E + + L + NH TW V ER L C + +A Sbjct: 181 P---FLSTPGQGAVALEARAGSV-LESLARQTNHLPTWLEVCGERQVLGAFGKGCSAPVA 236 Query: 250 GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDA 292 +G L VLA DG S G +A +G+ Sbjct: 237 VQGRYEGGVLTLEAEVLALDGSQSVGASLGGPAGTEEEARALGQTL 282 >gi|296131260|ref|YP_003638510.1| porphobilinogen deaminase [Cellulomonas flavigena DSM 20109] gi|296023075|gb|ADG76311.1| porphobilinogen deaminase [Cellulomonas flavigena DSM 20109] Length = 342 Score = 248 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 81/286 (28%), Positives = 126/286 (44%), Gaps = 35/286 (12%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIGTR S LAL + + + + + + T+GDR+ +L +GG G+ Sbjct: 3 QQVRIGTRASALALTQTGHVADA---LADLADLAVETVRVRTQGDRVR-ASLASLGGTGV 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F + L+ G D AVHS KD+PT GL ++A PR D RD + +L L Sbjct: 59 FVTALRDALLDGRCDVAVHSLKDLPTGPADGLVVAAVPPRADARDALCARDGLTLATLPA 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL---------------------- 161 + IGT S RR A L R D+ V+D RG + TRL ++ Sbjct: 119 GARIGTGSPRRAAQLRALRPDVDVVDIRGNVGTRLGRVRGLDATTVATGSQVGPDAPHPG 178 Query: 162 -----NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK--- 213 A++LA AG+ RL + + E + P+PGQGA+ +E + Sbjct: 179 VATDAPRGDLDAVVLAAAGLGRLGRLDAVTEWFAPDVLAPAPGQGALAVEVRTADAAADT 238 Query: 214 -AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST 258 ++ ++ T +V ERA LA L+ C + + + +T Sbjct: 239 PLAHALRALDDPPTRRAVVAERAVLARLEAGCAAPVGAWGRVDDAT 284 >gi|268324707|emb|CBH38295.1| porphobilinogen deaminase [uncultured archaeon] Length = 290 Score = 248 bits (635), Expect = 7e-64, Method: Composition-based stats. Identities = 89/297 (29%), Positives = 144/297 (48%), Gaps = 13/297 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LAL + L ++ I + + GD +T+R L E+ G+F Sbjct: 1 MIVGTRGSNLALVQTKKVCERLSEL----GVECEIKTVQSLGDVMTDRGLYEMPTIGVFV 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++++ L+ +ID AVHS KDMP++ + L SA LPR+ D +S L D+ + Sbjct: 57 KKLDMMLLDAKIDIAVHSMKDMPSEREEELDTSAVLPRDSPYDALVSR--YRLDDMPEGA 114 Query: 126 VIGTSSLRRKALLLRWRSD----ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 VIGTSS+RR+ L + + +++ D RG ++TR+ K + +++LA AG +RLK Sbjct: 115 VIGTSSVRRRYQFLNYVGERGVKVTIKDIRGNVDTRIAKFRRGEYDSVILAEAGFERLKL 174 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + E L+ + F PSP QG I + + + E++K I+ +T E L + Sbjct: 175 -DIEYERLDRDPFVPSPRQGIIAVVARRGSKE-SEILKQIDDSETRIEAEVEEEVLKVIG 232 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 G C + A KG ++ V ASD + E G R+ AQ + Sbjct: 233 GGCSLPVGVHATAKGGSVELAVYVAASDVRYKLEKVVLGKDYYMEET-RELAQKFKS 288 >gi|291523525|emb|CBK81818.1| porphobilinogen deaminase [Coprococcus catus GD/7] Length = 799 Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats. Identities = 97/305 (31%), Positives = 146/305 (47%), Gaps = 30/305 (9%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + ++ V P I I TKGDR +++L+ G KG FT+E+E ++ G Sbjct: 1 MVQTEMAAEAIKKV--FPSIEIEIAGFETKGDRHLDKSLSAFGSKGAFTKELEGAMLDGR 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS--HTAQSLKDLALHSVIGTSSLRR 134 ID AVHSAKD+P +L +GL + A L R D RDV++S +++ +V+GT SLRR Sbjct: 59 IDLAVHSAKDLPVELPEGLTVGAVLKRGDSRDVWVSLRREFSIIEECKEKTVVGTGSLRR 118 Query: 135 KALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK------------- 181 + + + + D RG + TRL KL++ I+LA AG+KRL Sbjct: 119 ALQIQQICPGVDIRDIRGNVPTRLKKLSDGMYDGIILAAAGLKRLGYLSEDCETEGSFEA 178 Query: 182 --EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + EIL+ E F P+ GQG I +ET + + + ++ I+ EDTW ER+FL Sbjct: 179 EEQTFFYEILSKEQFLPAAGQGIIALETRQKDCE--DCMQAIHDEDTWQMFLTERSFLRA 236 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD--------AINIGRD 291 + G C A A G + DG E + G RC A+++G Sbjct: 237 IGGGCNEAAAVDVRMDGQKVSVRARYA-GDGLHMKEKTVTGTRCGNIEEDRKLAVSLGEQ 295 Query: 292 AAQYI 296 A + Sbjct: 296 MAARL 300 >gi|171185430|ref|YP_001794349.1| porphobilinogen deaminase [Thermoproteus neutrophilus V24Sta] gi|229846306|sp|B1YDP0|HEM3_THENV RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|170934642|gb|ACB39903.1| porphobilinogen deaminase [Thermoproteus neutrophilus V24Sta] Length = 296 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 93/301 (30%), Positives = 144/301 (47%), Gaps = 9/301 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+ TR S L+L E + + V P I+ + T GD I ++ L +IG KG+F Sbjct: 2 KIRVATRGSKLSLIQTEELLAQIKAVE--PDIRFEIVVVKTTGDLIQDKPLFQIGVKGVF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ ++ GE D AVHS KD+P+ L GL ++ Y R D +S +L+ L Sbjct: 60 EKEVNLAVLRGEADMAVHSLKDLPSDLTPGLALAGYSRRAPPNDALVSPRGYTLETLPRG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL--KKE 182 +V+GTSS+RR L R D+ + RG ++TR+ K+ + + A ++A AG++RL Sbjct: 120 AVVGTSSVRRAEFLKAARPDLEIKPLRGNVDTRVAKILSGQYDAAVMAAAGLQRLYGGAP 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + L +ED PP PGQG + + +L++ + ERAFLAE+ Sbjct: 180 PIPAVPLAVEDLPPPPGQGIVAAVAREEDTWLTDLLRRASDRKAAAEAAAERAFLAEVGA 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C A+ G A + + F G H V G D +GR AA + + K Sbjct: 240 GCHVAVGGIARQTPAGIEFTAGYA--QGGRKHLVKVYG--EDPTEVGRRAA-RLVAQAMK 294 Query: 303 N 303 Sbjct: 295 K 295 >gi|258567590|ref|XP_002584539.1| porphobilinogen deaminase [Uncinocarpus reesii 1704] gi|237905985|gb|EEP80386.1| porphobilinogen deaminase [Uncinocarpus reesii 1704] Length = 287 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 76/320 (23%), Positives = 128/320 (40%), Gaps = 60/320 (18%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+K + IGTR SPLAL Sbjct: 5 ERKTYTIGTRKSPLALVQTDLV-------------------------------------- 26 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SL 118 + L + +C + +PT++ + A +PRE+ RDV + +L Sbjct: 27 -------RRALQTAYPNCDLKVHGHVPTQIPDACVLGAMMPRENPRDVLVIKKGLPWMTL 79 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 +L SV+GTSS+RR A L R + V D RG I+TRL KL+ + +++A AG+ Sbjct: 80 AELPAGSVVGTSSVRRTAQLARHYPHLVVQDIRGNIDTRLAKLDAEDGPFTCLIMAAAGL 139 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R E + + L+ ++ + GQGA+ IE ++ +++V I T + ER Sbjct: 140 LRTGHENRVTQYLDSKNGKMLHAVGQGALGIEVRTDDEVMKDMVNKIGDMPTTYACMAER 199 Query: 235 AFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 L ++G C + + L IV++ DGK E+ ++G+ +A Sbjct: 200 NLLRTVEGGCSAPLGVETEWIQDDNGKSLLRLRAIVVSVDGKEAVELEKDGDVESIEEAE 259 Query: 287 NIGRDAAQYIRFISNKNVFN 306 G+ A + + Sbjct: 260 AFGKQVALELIDKGAGKILE 279 >gi|27377509|ref|NP_769038.1| porphobilinogen deaminase [Bradyrhizobium japonicum USDA 110] gi|27350653|dbj|BAC47663.1| porphobilinogen deaminase [Bradyrhizobium japonicum USDA 110] Length = 313 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 86/310 (27%), Positives = 135/310 (43%), Gaps = 20/310 (6%) Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-LFTEEIEKKLI 73 +ALA E L +P ++ I+ T GD L GGKG F +I ++ Sbjct: 1 MALAQTEEIARRLTAA--VPGLDVEIVKFDTTGDLDQTSKLLPHGGKGGAFVAQIRAAVL 58 Query: 74 SGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL----HSVIG 128 SGE+ A+HS KDMP + GL I A L R+ D + +L+ L IG Sbjct: 59 SGELQAAMHSLKDMPGNEDTPGLVIGATLSRDPPSDALVLRDGVTLEALRQSRGKGFKIG 118 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK------------AHAILLAYAGI 176 T+++RR A R D+ VI FRG +TR+ KL+N + A A+++A +G+ Sbjct: 119 TNAVRRAAYARRLFPDVEVIHFRGAADTRVRKLDNGEKQRLPDGGAVGPADALIMARSGL 178 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ I + P+ GQG + +E + + ++++ I+ + ER Sbjct: 179 DRVGLASRIAYEFTPAEMLPAAGQGIVAVECAAQDWQTRKILSSIDDPAAHACADAEREV 238 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L L+G C S +AGF+ G + VL G E SR G+ +GR + Sbjct: 239 LWVLNGHCNSPVAGFSTIAGDQMSLTASVLDLSGNTIIEASRTGSANRPRELGRAVGLEL 298 Query: 297 RFISNKNVFN 306 + Sbjct: 299 LGKGAAEIIE 308 >gi|232245|sp|P30527|HEM3_YERIN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|48614|emb|CAA47276.1| hydroxymethylbilane synthase [Yersinia intermedia] Length = 183 Score = 246 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 76/184 (41%), Positives = 103/184 (55%), Gaps = 2/184 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + +D RD F+S + D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPVAFPEGLGLVTICEPDDPRDAFVSPHFAHIDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++G SSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+ RL Sbjct: 119 LPAGSIVGNSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRLG 178 Query: 181 KEKV 184 Sbjct: 179 LASR 182 >gi|322371455|ref|ZP_08046004.1| porphobilinogen deaminase [Haladaptatus paucihalophilus DX253] gi|320548987|gb|EFW90652.1| porphobilinogen deaminase [Haladaptatus paucihalophilus DX253] Length = 366 Score = 246 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 86/363 (23%), Positives = 158/363 (43%), Gaps = 63/363 (17%) Query: 1 MEKK--PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M + R+ TR S LA+ + E +++L D ++ ++ + T GD++ + +TE+ Sbjct: 1 MSNRGTELRLATRGSDLAIRQSGEVKAALEDRR----FSVELVEVETTGDQLDDALITEL 56 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G G F ++++++ E+D A+HS KDMPT L ++A R DV ++ + + Sbjct: 57 GKTGAFVRNLDQEVLDEEVDGAIHSMKDMPTDHPDELVVAAVPERASANDVLVTPDGKPI 116 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA---------- 168 L +V+GTSSLRRKA LL +R D++V RG ++TR+ KL A Sbjct: 117 DALPDGAVVGTSSLRRKAQLLNFRPDLTVKPLRGNVDTRIEKLLAPVLQAEHEERTEEEK 176 Query: 169 -------------------ILLAYAGIKRLKKEKVIKEIL-------------------- 189 I + + +++ + ++I Sbjct: 177 ERKGHVGKKDSYEFPYDKTIDEWFNDLSEVERRALERDIETEYDGIVLAEAGLQRSGLAH 236 Query: 190 -------NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + F P+PGQGA+ + T ++ AQ+L V++H T ER L EL+G Sbjct: 237 HVEYDRLPPKQFVPAPGQGALAVMT-LDGELAQDLHTVLDHPRTRVETTVERTILRELNG 295 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C + I + +G ++ V + DG + R+ + + A+ + + Sbjct: 296 GCIAPIGVHSIIQGENVHVEAQVFSQDGSEVISIKRDVPVETHVTGAKKVAEELADRGAR 355 Query: 303 NVF 305 ++ Sbjct: 356 DLI 358 >gi|327329283|gb|EGE71043.1| hydroxymethylbilane synthase [Propionibacterium acnes HL103PA1] Length = 315 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 83/309 (26%), Positives = 135/309 (43%), Gaps = 28/309 (9%) Query: 26 SLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAK 85 + + + ++ + ++T GD I+ +L +GG G+F I L+ GE D AVHS K Sbjct: 1 MVARLLRSEGLDVDLTTITTHGD-ISTASLAAMGGIGVFASAIRATLLKGEADIAVHSFK 59 Query: 86 DMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDI 145 D+PT GL I A R D RD ++ +L DL + +GT S RR A LL R D+ Sbjct: 60 DLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAVRPDL 119 Query: 146 SVIDFRGKIETRLNKLNN----------NKAHAILLAYAGIKRLKKEKVIKEILNIEDFP 195 +++D RG ++TRL ++ A++LA +G+ RL + E L+ Sbjct: 120 TIVDIRGNVDTRLGRVKGLGHYAKGGGKEDLDAVVLAASGLARLGHSGTVTEFLDPSVVL 179 Query: 196 PSPGQGAICIETHVNNPK---AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252 P+P QGA+ +E + + + + I+ T + ERA L+ L+ C + I A Sbjct: 180 PAPAQGALAVECRTADSRHGKLAKALARIDDRRTRLAATAERAVLSHLEAGCAAPIGALA 239 Query: 253 YCK------GSTLYFYGIVLASDGKIFHE--------VSRNGNRCDAINIGRDAAQYIRF 298 K L +V DG + A +G AA+ + Sbjct: 240 QLKPVSGSSPQVLTLDVVVATVDGSRIIREQVSVELPAEVDSALAAAHTLGVTAAEELLD 299 Query: 299 ISNKNVFNF 307 +V + Sbjct: 300 DGAADVADL 308 >gi|152964587|ref|YP_001360371.1| porphobilinogen deaminase [Kineococcus radiotolerans SRS30216] gi|151359104|gb|ABS02107.1| porphobilinogen deaminase [Kineococcus radiotolerans SRS30216] Length = 326 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 91/299 (30%), Positives = 143/299 (47%), Gaps = 12/299 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +P R+GTR S LA + L + ++ ++T+GD L +IGG G Sbjct: 2 TRPLRLGTRRSALATTQSSWVADLLRR----GGSPVELVEITTRGDVDR-APLAQIGGTG 56 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F + L++GE+D AVHS KD+PT GL ++A RED RDV ++ +L DL Sbjct: 57 VFVSALRDALLAGEVDLAVHSLKDLPTSAADGLALAAVPGREDPRDVLVAAGGATLADLP 116 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GT S RR+ALLL R D+ V+ RG ++TR+ + A++LA AG+ R + Sbjct: 117 RGARVGTGSPRRRALLLALRPDLDVVAVRGNVDTRIGFATGGELDAVVLAAAGLARTGRL 176 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 E+ E F P+PGQGA+ +E ++ + + ++ +V ER LA L+ Sbjct: 177 HEASELFAPEVFVPAPGQGALAVECRADDAEVLAALAALDVPAVRWAVAAERQVLASLEA 236 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIRF 298 C + + A G L+ V DG + D A +G A + Sbjct: 237 GCSAPVGAHA--AGGVLHV--AVEDPDGALVRRAVPAAGLDDEGAARRLGASVAADLLE 291 >gi|257387166|ref|YP_003176939.1| porphobilinogen deaminase [Halomicrobium mukohataei DSM 12286] gi|257169473|gb|ACV47232.1| porphobilinogen deaminase [Halomicrobium mukohataei DSM 12286] Length = 377 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 89/357 (24%), Positives = 152/357 (42%), Gaps = 60/357 (16%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+ TR S LAL A +L + + I+ + T GD+I + + +G G F Sbjct: 6 TVRLATRGSDLALRQAATVTETLEAR----GYTVEIVEVETTGDQIRDELIHRLGKTGAF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 ++++++ GE+D AVHS KD+PT+ + L ++ RE DV ++ ++ +L Sbjct: 62 VRSLDEQVVDGEVDAAVHSMKDVPTEQPEELVVAGVPQRESPDDVLVTPDGATVDELPDG 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------------------- 161 + +GTSSLRRKA LL R D+ V RG ++TR+ KL Sbjct: 122 ATVGTSSLRRKAQLLAERPDLDVQPLRGNVDTRIEKLLAPTLQSEHEERSEAEKEQKEKV 181 Query: 162 NNNKA-------------------------------HAILLAYAGIKRLK-KEKVIKEIL 189 ++ + A++LA AG++R V + L Sbjct: 182 DDEEYEFPYEQDVETWFDGLTEIERQALGREVETAYDAVVLARAGLERAGLLHHVEYQSL 241 Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 F P+PGQGA+ + ++ A+EL ++H + ER L EL G C + + Sbjct: 242 PTGTFVPAPGQGALAVTA-TDDEFARELNDALDHPRSRAETTVERTVLDELGGGCVAPLG 300 Query: 250 GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 A +GS + VL G+ +R+ + ++ R A + ++ Sbjct: 301 VHAILQGSVIRTTVRVLDQAGEREVAATRDLSADRHVDDARAFAADLAEQGGADLIE 357 >gi|13676388|dbj|BAB41183.1| porphobilinogen deaminase [Amaranthus tricolor] Length = 198 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 99/198 (50%), Positives = 133/198 (67%), Gaps = 1/198 (0%) Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115 +IGGKGLFT+EI++ L++ EID AVHS KD+PT L + + L RED+RD FIS TA Sbjct: 1 ADIGGKGLFTKEIDEALLNNEIDIAVHSMKDVPTYLPDKIILPCNLEREDVRDAFISTTA 60 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYA 174 SL DL SV+GT+SLRRK+ LL + V+D FRG ++TRL KLN A LLA A Sbjct: 61 SSLADLPAGSVVGTASLRRKSQLLHRYPSLEVLDNFRGNVQTRLRKLNEGLVQATLLALA 120 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G+KRL + + +L+I+D P+ QGAI I ++ K + ++NHE+T +V CER Sbjct: 121 GLKRLNMTENVSSVLSIDDMLPAVAQGAIGIACLQDDDKMANYLALLNHEETQLAVACER 180 Query: 235 AFLAELDGSCKSAIAGFA 252 AFL LDGSC++ IAG+A Sbjct: 181 AFLETLDGSCRTPIAGYA 198 >gi|167823214|ref|ZP_02454685.1| porphobilinogen deaminase [Burkholderia pseudomallei 9] Length = 233 Score = 245 bits (626), Expect = 7e-63, Method: Composition-based stats. Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 2/223 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227 I+ +L+++D P+ GQGA+ IE + ++ + Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASA 233 >gi|313814512|gb|EFS52226.1| porphobilinogen deaminase [Propionibacterium acnes HL025PA1] gi|314922347|gb|EFS86178.1| porphobilinogen deaminase [Propionibacterium acnes HL001PA1] gi|314965338|gb|EFT09437.1| porphobilinogen deaminase [Propionibacterium acnes HL082PA2] gi|314982570|gb|EFT26662.1| porphobilinogen deaminase [Propionibacterium acnes HL110PA3] gi|315091095|gb|EFT63071.1| porphobilinogen deaminase [Propionibacterium acnes HL110PA4] gi|315094182|gb|EFT66158.1| porphobilinogen deaminase [Propionibacterium acnes HL060PA1] gi|315104838|gb|EFT76814.1| porphobilinogen deaminase [Propionibacterium acnes HL050PA2] Length = 315 Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 82/309 (26%), Positives = 134/309 (43%), Gaps = 28/309 (9%) Query: 26 SLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAK 85 + + + ++ + ++T GD + +L +GG G+F I L+ GE D AVHS K Sbjct: 1 MVARLLRSEGLDVDLTTITTHGDT-STASLAAMGGIGVFASAIRATLLKGEADIAVHSFK 59 Query: 86 DMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDI 145 D+PT GL I A R D RD ++ +L DL + +GT S RR A LL R D+ Sbjct: 60 DLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAVRPDL 119 Query: 146 SVIDFRGKIETRLNKLNN----------NKAHAILLAYAGIKRLKKEKVIKEILNIEDFP 195 +++D RG ++TRL ++ A++LA +G+ RL + E L+ Sbjct: 120 TIVDIRGNVDTRLGRVKGLGHYAKGGGKEDLDAVVLAASGLARLGHSGTVTEFLDPSVVL 179 Query: 196 PSPGQGAICIETHVNNPK---AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252 P+P QGA+ +E + + + + I+ T + ERA L+ L+ C + I A Sbjct: 180 PAPAQGALAVECRTADSRHGKLAKALARIDDRRTRLAATAERAVLSHLEAGCAAPIGALA 239 Query: 253 YCK------GSTLYFYGIVLASDGKIFHE--------VSRNGNRCDAINIGRDAAQYIRF 298 K L +V DG + A +G AA+ + Sbjct: 240 QLKPVSGSSPQVLTLDVVVATVDGSRIIREQVSVELPAEVDSALAAAHTLGVTAAEELLD 299 Query: 299 ISNKNVFNF 307 +V + Sbjct: 300 DGAADVADL 308 >gi|313765242|gb|EFS36606.1| porphobilinogen deaminase [Propionibacterium acnes HL013PA1] gi|313793133|gb|EFS41200.1| porphobilinogen deaminase [Propionibacterium acnes HL110PA1] gi|313821951|gb|EFS59665.1| porphobilinogen deaminase [Propionibacterium acnes HL036PA1] gi|313834370|gb|EFS72084.1| porphobilinogen deaminase [Propionibacterium acnes HL056PA1] gi|314926611|gb|EFS90442.1| porphobilinogen deaminase [Propionibacterium acnes HL036PA3] gi|314931036|gb|EFS94867.1| porphobilinogen deaminase [Propionibacterium acnes HL067PA1] gi|314969645|gb|EFT13743.1| porphobilinogen deaminase [Propionibacterium acnes HL037PA1] gi|314974711|gb|EFT18806.1| porphobilinogen deaminase [Propionibacterium acnes HL053PA1] gi|314980332|gb|EFT24426.1| porphobilinogen deaminase [Propionibacterium acnes HL072PA2] gi|314985507|gb|EFT29599.1| porphobilinogen deaminase [Propionibacterium acnes HL005PA1] gi|314987331|gb|EFT31422.1| porphobilinogen deaminase [Propionibacterium acnes HL005PA2] gi|315082096|gb|EFT54072.1| porphobilinogen deaminase [Propionibacterium acnes HL078PA1] gi|315097342|gb|EFT69318.1| porphobilinogen deaminase [Propionibacterium acnes HL038PA1] gi|315099447|gb|EFT71423.1| porphobilinogen deaminase [Propionibacterium acnes HL059PA2] gi|315106337|gb|EFT78313.1| porphobilinogen deaminase [Propionibacterium acnes HL030PA1] gi|327445624|gb|EGE92278.1| porphobilinogen deaminase [Propionibacterium acnes HL013PA2] gi|327447246|gb|EGE93900.1| porphobilinogen deaminase [Propionibacterium acnes HL043PA1] gi|327457080|gb|EGF03735.1| porphobilinogen deaminase [Propionibacterium acnes HL092PA1] gi|328758364|gb|EGF71980.1| porphobilinogen deaminase [Propionibacterium acnes HL020PA1] Length = 315 Score = 245 bits (625), Expect = 9e-63, Method: Composition-based stats. Identities = 83/303 (27%), Positives = 132/303 (43%), Gaps = 28/303 (9%) Query: 32 KIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91 + ++ + ++T GD + +L +GG G+F I L+ GE D AVHS KD+PT Sbjct: 7 RSEGLDVNLTTITTHGDT-STASLAAMGGIGVFASAIRAALLEGEADIAVHSFKDLPTGR 65 Query: 92 LKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFR 151 GL I A R D RD ++ +L DL + +GT S RR A LL R D++++D R Sbjct: 66 PLGLAIGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAVRPDLTIVDIR 125 Query: 152 GKIETRLNKLNN----------NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQG 201 G ++TRL ++ A++LA +G+ RL + E L+ P+P QG Sbjct: 126 GNVDTRLGRVKGLGRYAKNGGKEDLDAVVLAASGLARLGHSGAVTEFLDPSVVLPAPAQG 185 Query: 202 AICIETHVNNPK---AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG-- 256 A+ +E + + + + I+ T + ERA L+ L+ C + I A K Sbjct: 186 ALAVECRTADSRHGKLAKALARIDDRRTRLAATAERAVLSHLEAGCAAPIGALAQLKPVS 245 Query: 257 ----STLYFYGIVLASDGKIFHE--------VSRNGNRCDAINIGRDAAQYIRFISNKNV 304 L +V A DG A +G AA+ + +V Sbjct: 246 GKSLQVLTLDVVVAAVDGSRTVREQVSVELPAEVEPALAAAHTLGVTAAEELLDDGAADV 305 Query: 305 FNF 307 + Sbjct: 306 ADL 308 >gi|315110126|gb|EFT82102.1| porphobilinogen deaminase [Propionibacterium acnes HL030PA2] Length = 315 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 83/303 (27%), Positives = 132/303 (43%), Gaps = 28/303 (9%) Query: 32 KIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91 + ++ + ++T GD + +L +GG G+F I L+ GE D AVHS KD+PT Sbjct: 7 RSEGLDVNLTTITTHGDT-STASLAAMGGIGVFASAIRAALLEGEADIAVHSFKDLPTGR 65 Query: 92 LKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFR 151 GL I A R D RD ++ +L DL + +GT S RR A LL R D++++D R Sbjct: 66 PLGLAIGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAVRPDLTIVDIR 125 Query: 152 GKIETRLNKLNN----------NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQG 201 G ++TRL ++ A++LA +G+ RL + E L+ P+P QG Sbjct: 126 GNVDTRLGRVKGLGRYAKNGGKEDLDAVVLAASGLARLGHSGAVTEFLDPSVVLPAPAQG 185 Query: 202 AICIETHVNNPK---AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG-- 256 A+ +E + + + + I+ T + ERA L+ L+ C + I A K Sbjct: 186 ALAVECRTADSRHGKFAKALARIDDRRTRLAATAERAVLSHLEAGCAAPIGALAQLKPVS 245 Query: 257 ----STLYFYGIVLASDGKIFHE--------VSRNGNRCDAINIGRDAAQYIRFISNKNV 304 L +V A DG A +G AA+ + +V Sbjct: 246 GKSLQVLTLDVVVAAVDGSRTVREQVSVELPAEVEPALAAAHTLGVTAAEELLDDGAADV 305 Query: 305 FNF 307 + Sbjct: 306 ADL 308 >gi|314964545|gb|EFT08645.1| porphobilinogen deaminase [Propionibacterium acnes HL082PA1] Length = 315 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 83/303 (27%), Positives = 132/303 (43%), Gaps = 28/303 (9%) Query: 32 KIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91 + ++ + ++T GD + +L +GG G+F I L+ GE D AVHS KD+PT Sbjct: 7 RSEGLDVNLTTITTHGDT-STASLAAMGGIGVFASAIRAALLEGETDIAVHSFKDLPTGR 65 Query: 92 LKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFR 151 GL I A R D RD ++ +L DL + +GT S RR A LL R D++++D R Sbjct: 66 PLGLAIGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAVRPDLTIVDIR 125 Query: 152 GKIETRLNKLNN----------NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQG 201 G ++TRL ++ A++LA +G+ RL + E L+ P+P QG Sbjct: 126 GNVDTRLGRVKGLGRYAKNGGKEDLDAVVLAASGLARLGHSGAVTEFLDPSVVLPAPAQG 185 Query: 202 AICIETHVNNPK---AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG-- 256 A+ +E + + + + I+ T + ERA L+ L+ C + I A K Sbjct: 186 ALAVECRTADSRHGKLAKALARIDDRRTRLAATAERAVLSHLEAGCAAPIGALAQLKPVS 245 Query: 257 ----STLYFYGIVLASDGKIFHE--------VSRNGNRCDAINIGRDAAQYIRFISNKNV 304 L +V A DG A +G AA+ + +V Sbjct: 246 GKSLQVLTLDVVVAAVDGSRTVREQVSVELPAEVEPALAAAHTLGVTAAEELLDDGAADV 305 Query: 305 FNF 307 + Sbjct: 306 ADL 308 >gi|15920398|ref|NP_376067.1| porphobilinogen deaminase [Sulfolobus tokodaii str. 7] gi|25453026|sp|Q976H1|HEM3_SULTO RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|15621180|dbj|BAB65176.1| 294aa long hypothetical porphobilinogen deaminase [Sulfolobus tokodaii str. 7] Length = 294 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 90/301 (29%), Positives = 148/301 (49%), Gaps = 11/301 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI R S L+ + L + I + TK D N L+++G KG+F Sbjct: 3 IRIAARGSKLSRIQVMMVENYLHKL----GIETEFIEIKTKADLFQNEPLSKLG-KGVFE 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+ + ++ + D AVHS KD+ T++ + L+I A LPR+ D+ IS ++L +L +S Sbjct: 58 KEVNQAVLDNKADVAVHSMKDILTEISENLEIYAVLPRDPPFDILISR--KNLFNLEPNS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +IGTSS+RRK L +R+D+++ D RG I+TRL K + I++A A I RL KE+V Sbjct: 116 IIGTSSIRRKNFLTFYRNDLNIKDLRGNIDTRLKKYFEGQYDGIIIAEASIYRL-KEQVQ 174 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ F P QG I + + +++ IN +DT + ER L+ + G C Sbjct: 175 YYRLDPHLFTPEANQGIIVVIGRKKDETIKKIFNEINDKDTLEIAIAERKALSIVGGGCH 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY-IRFISNKNV 304 S I + F+GI+ +S G+ + + G + + I N+ + Sbjct: 235 SPIGVYFEKYDKD--FHGIISSSFGRKKITIEEYFHNMTPYEAGELLGKRFLEEIKNEGI 292 Query: 305 F 305 Sbjct: 293 I 293 >gi|260579339|ref|ZP_05847221.1| porphobilinogen deaminase (hydroxymethylbilanesynthase) (Pre-uroporphyrinogen synthase) [Corynebacterium jeikeium ATCC 43734] gi|258602468|gb|EEW15763.1| porphobilinogen deaminase (hydroxymethylbilanesynthase) (Pre-uroporphyrinogen synthase) [Corynebacterium jeikeium ATCC 43734] Length = 359 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 86/338 (25%), Positives = 142/338 (42%), Gaps = 43/338 (12%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGGK 61 + F IGTR S LA R + + + + T GD + +IG Sbjct: 25 RTFLIGTRRSALATTQTSHVRDGMQSA----GYAAELHLVHTPGDASQAAQIPVAQIG-V 79 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FTE + K L +GE D AVHS KD+PT + R D R+V +S Q L +L Sbjct: 80 GVFTETLRKALEAGECDVAVHSFKDLPTA-PDPRFRTVVPRRVDPREVLVSRNNQPLLEL 138 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTS+ RR + + R D+ ++ RG I+TR+ + A++LA AG++R+ + Sbjct: 139 PQGAKVGTSAPRRVSQIRAVRPDLELMPLRGNIDTRMGR-TEKDLDAVVLARAGLERVGQ 197 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + E ++ P+P QGA+ +E ++ A + V+ ++H + + ERA L+ L+ Sbjct: 198 LERAAESIDPSTIMPAPAQGALSVEVRADDEAAWQAVRHLDHLPSHMAAVAERAVLSTLE 257 Query: 242 GSCKSAIAGFAYCKGST-----------LYFYGIVLASDGKIFHEVSRNG------NRCD 284 C + +A ++ L +G V A DG S D Sbjct: 258 AGCTAPVAAYSEWVQQEGTAEGADKRYVLRVFGGVFAMDGSRKLVRSGEAGFDIPEPTAD 317 Query: 285 -----------------AINIGRDAAQYIRFISNKNVF 305 A IG D + + + Sbjct: 318 EGFPAAEEPRWRECIAAARAIGIDIGRALLEDGAAELV 355 >gi|68536995|ref|YP_251700.1| hypothetical protein jk1901 [Corynebacterium jeikeium K411] gi|68264594|emb|CAI38082.1| hemC [Corynebacterium jeikeium K411] Length = 367 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 87/346 (25%), Positives = 143/346 (41%), Gaps = 51/346 (14%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGGK 61 + F IGTR S LA R + + + + T GD + +IG Sbjct: 25 RTFLIGTRRSALATTQTSHVRDGMQSA----GYAAELHLVHTPGDASQAAQIPVAQIG-V 79 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FTE + K L +GE D AVHS KD+PT + R D R+V +S Q L +L Sbjct: 80 GVFTETLRKALEAGECDVAVHSFKDLPTA-PDPRFRTVVPRRVDPREVLVSRNNQPLLEL 138 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTS+ RR + + R D+ ++ RG I+TR+ + A++LA AG++R+ + Sbjct: 139 PQGAKVGTSAPRRVSQIRAVRPDLELMPLRGNIDTRMGR-TEKDLDAVVLARAGLERVGQ 197 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + E ++ P+P QGA+ +E ++ A + V+ ++H + + ERA L+ L+ Sbjct: 198 LERAAESIDPSTIMPAPAQGALSVEVRADDEAAWQAVRHLDHLPSHMAAVAERAVLSTLE 257 Query: 242 GSCKSAIAGFAYCKGST-------------------LYFYGIVLASDGKI-FHEVSRNG- 280 C + +A ++ L +G V A DG S G Sbjct: 258 AGCTAPVAAYSEWVQQEGTADGAVDGTVDGTEKHYVLRVFGGVFAMDGSRKLVRSSEAGF 317 Query: 281 ----NRCD-----------------AINIGRDAAQYIRFISNKNVF 305 D A IG D + + + Sbjct: 318 DISEPTADEGFPAAEEPRWREYIDAARAIGIDIGRALLEDGAAELV 363 >gi|254445937|ref|ZP_05059413.1| porphobilinogen deaminase [Verrucomicrobiae bacterium DG1235] gi|198260245|gb|EDY84553.1| porphobilinogen deaminase [Verrucomicrobiae bacterium DG1235] Length = 291 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 89/262 (33%), Positives = 127/262 (48%), Gaps = 15/262 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + + I TR SPLA+A + +P I + T GD+ +L + GGKGL Sbjct: 6 REYVIATRKSPLAMAQTHLAKELFQR--GMPDAVFRIEKMVTTGDKRQEWSLEKQGGKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E L+ G D AVHSAKD+P+++ KGL ++ +LPR+ DV I L Sbjct: 64 FTKELEDALLEGRADFAVHSAKDLPSEMPKGLALAGFLPRQTCEDVLILRDGVESPKL-- 121 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK--- 180 I T S RR+ L + RG ++TRL K+ A A +LA AG+ RL Sbjct: 122 ---IATGSPRRRIQLRYLFPKAEFTEIRGNVDTRLTKIARGDADATVLASAGLNRLGIES 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E V L +++ P+ GQ A+ I+ + E+T +VN ER+FL EL Sbjct: 179 WEGVTFRKLTLDECVPAVGQAAVAIQCREEDVDTFRAHL---DEETAIAVNLERSFLEEL 235 Query: 241 DGSCKSAIAGFAYCKGSTLYFY 262 G C+ A A G L Y Sbjct: 236 GGGCQVAFAVN--YVGGRLRIY 255 >gi|146303002|ref|YP_001190318.1| porphobilinogen deaminase [Metallosphaera sedula DSM 5348] gi|189028093|sp|A4YD92|HEM3_METS5 RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|145701252|gb|ABP94394.1| hydroxymethylbilane synthase [Metallosphaera sedula DSM 5348] Length = 290 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 92/299 (30%), Positives = 143/299 (47%), Gaps = 16/299 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI R S L+L + L + I + TK D N+ L EIG KG+F Sbjct: 2 KIRIAARGSKLSLKQVEIVTTYLQAK----GYETEFIEIKTKADLFGNKPLHEIG-KGVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ + ++ G D AVHS KDM ++L GL++ A RE+ DV +S +L++L Sbjct: 57 EKEVNEAVLQGRADIAVHSMKDMSSELPPGLELLATPKRENPVDVLVSE--LNLEELPEK 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S IGT SLRR L R D+ V + RG ++TRL K +++ I+LA AG++RL E V Sbjct: 115 SRIGTGSLRRANFLKVVRPDLVVENIRGNVDTRLRKYRDHEYDGIILAEAGLRRLGVE-V 173 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + L++E F P P QG I + +PK L + +N T E+ + + G C Sbjct: 174 KRFPLDVESFTPEPNQGIIAVV---GSPKFLGLFQELNDTGTMKEALAEKETVKVVGGGC 230 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV---SRNGNRCDAINIGRDAAQYIRFIS 300 S + + L+ GI S+G V +R + +G+ + ++ Sbjct: 231 HSPLGVLFRLEDDVLH--GIASYSNGVKRVTVKLSTRESPQIAGNQLGKALVKAMKDEG 287 >gi|15897134|ref|NP_341739.1| porphobilinogen deaminase [Sulfolobus solfataricus P2] gi|284174377|ref|ZP_06388346.1| porphobilinogen deaminase [Sulfolobus solfataricus 98/2] gi|25453029|sp|Q980U4|HEM3_SULSO RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|13813317|gb|AAK40529.1| Porphobilinogen deaminase [Sulfolobus solfataricus P2] gi|261601798|gb|ACX91401.1| porphobilinogen deaminase [Sulfolobus solfataricus 98/2] Length = 293 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 92/302 (30%), Positives = 149/302 (49%), Gaps = 12/302 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I R S L+ L + +I + TK D + L+++G KG+F Sbjct: 2 KILIAARGSKLSRVQVDMVGEKLRKI----GIEYDVIDIKTKADLFSTEPLSKLG-KGVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ + ++ G+ D AVHS KD+ +++ L+I A + R+ D+ I+ ++L L + Sbjct: 57 EKEVNEAVLEGKADVAVHSMKDILSEINPELEIFAVIERDPPYDILIAE--KNLHKLDPN 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGTSS+RRK + R +I+ D RG ++TR+ K + + ++LA A IKRL + Sbjct: 115 TTIGTSSIRRKNFIKYIRPEINTKDIRGNVDTRIRKYLSKEYDGLILAEASIKRLNIS-I 173 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 LN+ DF P QG I + + K +E+ K I H+DT D ERA ++ + G C Sbjct: 174 SYHRLNVYDFTPEANQGIIVVLGRKKDEKVKEVFKEITHKDTLDEALAERATISVVGGGC 233 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI-RFISNKN 303 S I +G FYGI SDGK VS + D IG + + + + N+ Sbjct: 234 HSPIGVLFRKEGKE--FYGIASYSDGKKKITVSIS-KAGDPYTIGSELGLLLKKEMKNEG 290 Query: 304 VF 305 + Sbjct: 291 II 292 >gi|311895212|dbj|BAJ27620.1| putative porphobilinogen deaminase [Kitasatospora setae KM-6054] Length = 304 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 95/303 (31%), Positives = 133/303 (43%), Gaps = 10/303 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL---TEIGGKG 62 +G+R S LA A E + L + P + GD L +E GG Sbjct: 4 LVVGSRASQLARAQVKEFLAPLRA--RFPEVAFRHRVILEDGDLDRKSDLRAVSERGGGS 61 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 F L+ E+D VHS KD+PT GL + PR D+RD L L Sbjct: 62 AFAGRQAAALLDREVDVVVHSLKDLPTADPDGLLLLPSPPRADVRDALC---GAPLAGLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTS+ RR A LL R D++ RG + TRL +L A++LA AG+ RL ++ Sbjct: 119 TGARVGTSAARRIAQLLYVRPDLAPERIRGNVPTRLTRLRT--LDAVVLAAAGLHRLGRD 176 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E+L + FPPSPGQGA+ I+ ++ A+EL+ T V ERA LAEL G Sbjct: 177 GEIAELLPLAQFPPSPGQGALGIQVRADDAMARELLAGTGDPVTDAEVRAERAMLAELHG 236 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C + A L +G V G E +G +GR A + + Sbjct: 237 GCSVPVGAHATTADGILTLHGQVTTPRGTRQIEARLSGTSAAPEKLGRAVAGLLLDQDAE 296 Query: 303 NVF 305 + Sbjct: 297 CLL 299 >gi|88603799|ref|YP_503977.1| porphobilinogen deaminase [Methanospirillum hungatei JF-1] gi|88189261|gb|ABD42258.1| hydroxymethylbilane synthase [Methanospirillum hungatei JF-1] Length = 295 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 88/303 (29%), Positives = 139/303 (45%), Gaps = 20/303 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA A A + + L D+ + ++ +ST GD T L EIGG+G+F Sbjct: 2 PLRVGTRASELAKAQAVKVCTMLEDL----GVDTELVFISTAGDEQTGVPLHEIGGQGVF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 ++ L+ +ID AVHS KD+P + GL SA L R+ D ++ +L Sbjct: 58 VRALDDALVQNKIDLAVHSMKDIPAERPYGLVTSAILARDSPCDYIVTDH-----ELDEI 112 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSS RR A R + RG + TRL+KL + + AI+LA AG++RL + Sbjct: 113 TTLGTSSTRRTAQCRRNLPWADIRPLRGNVNTRLSKLQSGEYDAIMLAKAGLERLSMT-L 171 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 L+ PSP QG I + + +P +++ I+ T ER + + G C Sbjct: 172 DGYQLDPRVHVPSPNQGTIAVVSRT-DPDVTDIISKIDDPKTRMDTLLERRVMEMIGGGC 230 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-NGNRCDAINIGRDAAQYIRFISNKN 303 + + + L VL+ +G + R + DA G + R + Sbjct: 231 FTPLGIYCK---DRL-MIAEVLSLEGDRHFRLERLVSDIDDADRFGLEV----RERAGDL 282 Query: 304 VFN 306 + Sbjct: 283 IRE 285 >gi|295836866|ref|ZP_06823799.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74] gi|197699525|gb|EDY46458.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74] Length = 335 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 89/308 (28%), Positives = 131/308 (42%), Gaps = 14/308 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT----LTEIG 59 + +G+R S LA A E ++P V ++ GD + +T Sbjct: 31 RTVTVGSRGSALARAQVREMVERWER--EVPGVRFVRRVITEAGDADRSTPTVAGVTRRA 88 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYL-PREDIRDVFISHTAQSL 118 G F+ E L+ E+D VH KD+PT G + PRED RD +L Sbjct: 89 GVSAFSSRQEAALVRREVDVVVHCLKDLPTTPAPGTALLRTPGPREDARDALC---GATL 145 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L + +GT S RR A LL R D+ VI RG + RL +L A++LA AG+ R Sbjct: 146 AGLPRGARVGTGSTRRVAQLLALRPDLEVIPVRGNVPARLARLRT--LDAVVLAAAGLHR 203 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + I E L+ E +PP+PGQGA+ I+ + A+ L+ T V ER LA Sbjct: 204 LGLTEEITEYLDPEAYPPAPGQGALAIQVREGSGAAR-LLAASGDPATDTEVRAERVLLA 262 Query: 239 ELDGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL G C + + + TL + V A DG + G + + A+ + Sbjct: 263 ELHGGCSVPLGTWTSRPSPGTLRLHAAVTAPDGGRQITATAQGPASEPDKLALTVAERLL 322 Query: 298 FISNKNVF 305 + Sbjct: 323 AGGAARIL 330 >gi|123210216|emb|CAM15096.1| hydroxymethylbilane synthase [Danio rerio] Length = 247 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 88/232 (37%), Positives = 125/232 (53%), Gaps = 6/232 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + R+GTR S LA +L ++ P ++ I+ +ST GD+I + L++IG K Sbjct: 18 ASRVIRMGTRKSQLARIQTDSVAGTLKQLY--PDVHLEIVAMSTIGDKILDTALSKIGEK 75 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118 LFT+E+E L E+D VHS KD+PT L G I A L RE+ D + H +L Sbjct: 76 SLFTKELENALERNEVDIVVHSLKDLPTSLPPGFTIGAILERENPHDAVVLHPKNAGLTL 135 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIK 177 L SVIGTSSLRR A L + + + RG + TRL KL+ AI+LA AG+K Sbjct: 136 DSLPEKSVIGTSSLRRAAQLKKRFPQLEFENIRGNLNTRLKKLDEKDDYAAIILAAAGLK 195 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 R+ E I ++L ED + GQGA+ +E + E+V V++H DT Sbjct: 196 RMGWESRISQVLGPEDCMYAVGQGALAVEVRAQDKDILEMVSVLHHPDTVLR 247 >gi|330835713|ref|YP_004410441.1| porphobilinogen deaminase [Metallosphaera cuprina Ar-4] gi|329567852|gb|AEB95957.1| porphobilinogen deaminase [Metallosphaera cuprina Ar-4] Length = 289 Score = 240 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 91/299 (30%), Positives = 135/299 (45%), Gaps = 17/299 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI R S L++ S L + I + T+ D + L EIG KG+F Sbjct: 2 KVRIAARGSRLSVKQVETVSSYLNSR----GYETEFIEVKTRADLFSGTPLHEIG-KGVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ + ++ G+ D AVHS KD+ + L +GL+I A RE+ DV +S L+++ Sbjct: 57 DKEVNEAVLIGKADLAVHSMKDL-SALPEGLKILATPRRENPSDVLVS--DYELQEMPAG 113 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S IGT SLRR L R D+ VI+ RG ++TR+ K + I+LA AG+ RL V Sbjct: 114 SKIGTGSLRRTNFLKVLRPDLQVINLRGNVDTRIRKYLTREYDGIILAEAGLVRLGI-NV 172 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + L++ DF P QG I I P EL+K +N E T ER + + G C Sbjct: 173 KRHELDVHDFTPEANQGIIAIVGR---PHLTELLKELNDEATMTVARAEREVVKVIGGGC 229 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIRFIS 300 S + + GI SDG S + +GR + ++ Sbjct: 230 HSPLGVLFQMEDD--RLTGIASYSDGIRRVSASVSVMDSPEAAGQALGRALLKEMKNAG 286 >gi|319440758|ref|ZP_07989914.1| hypothetical protein CvarD4_03233 [Corynebacterium variabile DSM 44702] Length = 336 Score = 240 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 89/335 (26%), Positives = 141/335 (42%), Gaps = 38/335 (11%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60 + IGTR S LA R +L+D + + T GD ++ IG Sbjct: 2 TRTLLIGTRASALASTQTGMVRDALVDNGATADLHF----VHTPGDASQKAQTPVSRIG- 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FTE + L +GE D AVHS KD+PT I+ PR D R+V +SH +L++ Sbjct: 57 VGVFTETLRNALAAGECDVAVHSFKDLPTA-PDPRFIAVVPPRVDPREVLVSHGNLTLRE 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-----------KAHAI 169 L + IGT + RR + + R D+ I RG I+TR+ + + A+ Sbjct: 116 LPTGAKIGTGAPRRVSQIRAVRPDVECISIRGNIDTRMGRAGDGTTSTVVEGGPGDLAAV 175 Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 +LA AG++R+ E + + D P+P QGA+C+E ++ +A V ++ + Sbjct: 176 VLARAGLERVGHLDHAAETVAVTDIMPAPAQGALCVEVRADDAEAVAAVLGLDDPASHAR 235 Query: 230 VNCERAFLAELDGSCKSAIAGFAYC----KGSTLYFYGIVLASDGK--IFHEVSRNGNRC 283 ER LA L+ C + + ++ + L A DG + E S + Sbjct: 236 AVAERGVLATLEAGCTAPVGAYSEFGTAEDAAILTLQAGAFALDGSTRVVREASVTIDLS 295 Query: 284 D-------------AINIGRDAAQYIRFISNKNVF 305 D A +GR Q + V Sbjct: 296 DVGADPLHPRWRDAARELGRTVGQKLLDAGAAEVI 330 >gi|333024831|ref|ZP_08452895.1| putative porphobilinogen deaminase [Streptomyces sp. Tu6071] gi|332744683|gb|EGJ75124.1| putative porphobilinogen deaminase [Streptomyces sp. Tu6071] Length = 308 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 86/311 (27%), Positives = 131/311 (42%), Gaps = 14/311 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT----LT 56 M + +G+R S LA A E ++P V ++ GD + +T Sbjct: 1 MVESVVTVGSRGSALARAQVREMVERWER--EVPGARFVRRVITEAGDADRSTPTVAGVT 58 Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYL-PREDIRDVFISHTA 115 G F+ E L+ GE+D VH KD+PT G + PRED+RD Sbjct: 59 RRAGASAFSSRQEAALVRGEVDVVVHCLKDLPTAPAPGTVLLRTPGPREDVRDALC---G 115 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 +L L + +GT S RR A +L R D+ V+ RG + RL + A++LA AG Sbjct: 116 ATLAGLPTGARVGTGSTRRVAQMLALRPDLEVVPVRGNVPARLARTRT--LDAVVLAAAG 173 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + RL I E L+ E +PP+PGQGA+ I+ + +A L+ T V ER Sbjct: 174 LHRLGLADEITEYLDPEAYPPAPGQGALAIQVRE-DSEAARLLAASGDAATDAEVRAERV 232 Query: 236 FLAELDGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 LAEL G C + + + + L + V DG + G + + A+ Sbjct: 233 LLAELHGGCSVPLGTWTSRPSPTLLRLHAAVTTPDGTHQIAATAQGPAEEPEKLALTVAE 292 Query: 295 YIRFISNKNVF 305 + + Sbjct: 293 RLLAQGAARIL 303 >gi|332796306|ref|YP_004457806.1| porphobilinogen deaminase [Acidianus hospitalis W1] gi|332694041|gb|AEE93508.1| porphobilinogen deaminase [Acidianus hospitalis W1] Length = 292 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 86/292 (29%), Positives = 139/292 (47%), Gaps = 11/292 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI R S L+ L + + I + TK D N L ++G KG+F Sbjct: 2 IRIAARNSQLSQVQVKVVSDYLNKL----GYETEFIGVKTKADLFVNEPLYKLG-KGVFE 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+ + +I G D AVHS KD+ + L + L I A + R+ DV +S + + DL S Sbjct: 57 KEVNEYVIRGLADLAVHSMKDLTSNLSEELDILATVKRDSPYDVLVSK--KDVFDLDSGS 114 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS+RRK + R DI V D RG I+TR+ K + + I++A A I RL + Sbjct: 115 VIGTSSIRRKNFMTFLRPDILVKDLRGNIDTRIKKYTSGEYVGIIIAEASILRLNL-NIN 173 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 LN DF P QG I + N+ + ++L+ ++ ++T++ ER+ + + G C Sbjct: 174 YFKLNPIDFTPEANQGIIAVVGKKNDERTRKLLSELHDQETFNEAIAERSTMEIVGGGCH 233 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 S + GI S+GK V+ + + ++G + + + Sbjct: 234 SPFGVYFEQIDD--RLLGIASFSNGKKKITVTIE-RKGNPKDVGHELGKLLL 282 >gi|318057211|ref|ZP_07975934.1| porphobilinogen deaminase [Streptomyces sp. SA3_actG] gi|318079308|ref|ZP_07986640.1| porphobilinogen deaminase [Streptomyces sp. SA3_actF] Length = 314 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 85/306 (27%), Positives = 128/306 (41%), Gaps = 14/306 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT----LTEIGGK 61 +G+R S LA A E ++P V ++ GD + +T G Sbjct: 12 VTVGSRGSALARAQVREMVERWER--EVPGTRFVRRVITEAGDADRSTPTVAGVTRRAGA 69 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYL-PREDIRDVFISHTAQSLKD 120 F+ E L+ GE+D VH KD+P G + PRED+RD +L Sbjct: 70 SAFSSRQEAALVRGEVDVVVHCLKDLPNAPAPGTVLLRTPGPREDVRDALC---GATLAG 126 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT S RR A LL R D+ V+ RG + RL + A++LA AG+ RL Sbjct: 127 LPTGARVGTGSTRRVAQLLALRPDLEVVPVRGNVPARLARTRT--LDAVVLAAAGLHRLG 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E L+ E +PP+PGQGA+ I+ + +A L+ T V ER LAEL Sbjct: 185 LADEITEYLDPEVYPPAPGQGALAIQVRE-DSEAARLLAASGDAATDAEVRAERVLLAEL 243 Query: 241 DGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G C + + + + L + V DG + G + + A+ + Sbjct: 244 HGGCSVPLGTWTSRPSPTLLRLHAAVTTPDGTHQIAATAQGPTAEPEKLALTVAERLLAQ 303 Query: 300 SNKNVF 305 + Sbjct: 304 GAARIL 309 >gi|315654433|ref|ZP_07907341.1| hydroxymethylbilane synthase [Mobiluncus curtisii ATCC 51333] gi|315491468|gb|EFU81085.1| hydroxymethylbilane synthase [Mobiluncus curtisii ATCC 51333] Length = 373 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 91/348 (26%), Positives = 146/348 (41%), Gaps = 48/348 (13%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++P IGTR S LAL S L ++ + +T+GD I +L +GG Sbjct: 7 TERPLVIGTRASALALTQTRAVASDLEQR----GLHVQVQTFTTEGD-INRASLASLGGV 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F + L+ G D VHS KD+PT + GL ++A RED DV ++ + SL DL Sbjct: 62 GVFAAALRVALLEGHCDLVVHSLKDLPTVPVDGLVVAATPTREDPGDVLVARDSLSLADL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------------NK 165 S +GT S RR + R DI ++D RG + TR+ ++ Sbjct: 122 PAGSRLGTGSPRRARQIAVARPDIELVDIRGNVPTRVGRVKGLAAVAEHAGLPSGKAAED 181 Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV---NNPK---AQELVK 219 ++LA AG++RL + I + L P+ GQGA+ +ET ++ + +++K Sbjct: 182 LDGVVLARAGLRRLGMDDAITDSLEGTV-IPAGGQGALALETRSELLDSDEGRNFAQILK 240 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAG--------FAYCKGSTLYFY-------GI 264 ++ E T V+ ERA L L+ C + + L G Sbjct: 241 FVDDEPTRLEVSAERALLRYLEAGCAAPLGVRGIVTWDKHTEAPSGRLELTARVIGNQGE 300 Query: 265 VLASDGKIFH-----EVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307 VL +G+ R+ A +G D A + + + Sbjct: 301 VLEVNGETTVLLGAEAAQRDFALAAAEQLGVDLAGELLEAGAATIADL 348 >gi|298345857|ref|YP_003718544.1| porphobilinogen deaminase [Mobiluncus curtisii ATCC 43063] gi|304390438|ref|ZP_07372391.1| hydroxymethylbilane synthase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315657641|ref|ZP_07910523.1| hydroxymethylbilane synthase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298235918|gb|ADI67050.1| porphobilinogen deaminase [Mobiluncus curtisii ATCC 43063] gi|304326194|gb|EFL93439.1| hydroxymethylbilane synthase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315492113|gb|EFU81722.1| hydroxymethylbilane synthase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 373 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 91/348 (26%), Positives = 146/348 (41%), Gaps = 48/348 (13%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++P IGTR S LAL S L ++ + +T+GD I +L +GG Sbjct: 7 TERPLVIGTRASALALTQTRAVASDLEQR----GLHVQVQTFTTEGD-INRASLASLGGV 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F + L+ G D VHS KD+PT + GL ++A RED DV ++ + SL DL Sbjct: 62 GVFAAALRVALLEGHCDLVVHSLKDLPTVPVDGLVVAATPTREDPGDVLVARDSLSLADL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------------NK 165 S +GT S RR + R DI ++D RG + TR+ ++ Sbjct: 122 PAGSRLGTGSPRRARQIAVARPDIELVDIRGNVPTRVGRVKGLAAVAEQAGLPSGKAAED 181 Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV---NNPK---AQELVK 219 ++LA AG++RL + I + L P+ GQGA+ +ET ++ + +++K Sbjct: 182 LDGVVLARAGLRRLGMDDAITDSLEGTV-IPAGGQGALALETRSELLDSDEGRNFAQILK 240 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAG--------FAYCKGSTLYFY-------GI 264 ++ E T V+ ERA L L+ C + + L G Sbjct: 241 FVDDEPTRLEVSAERALLRYLEAGCAAPLGVRGVVTWDKHTEAPSGRLELTARVIGNQGE 300 Query: 265 VLASDGKIFH-----EVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307 VL +G+ R+ A +G D A + + + Sbjct: 301 VLEVNGETTVLLGAEAAQRDFALAAAEQLGVDLAGELLEAGAATIADL 348 >gi|71005230|ref|XP_757281.1| hypothetical protein UM01134.1 [Ustilago maydis 521] gi|46096460|gb|EAK81693.1| hypothetical protein UM01134.1 [Ustilago maydis 521] Length = 770 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 83/239 (34%), Positives = 115/239 (48%), Gaps = 17/239 (7%) Query: 35 PHNIVIIPLSTKGDRITNRTLTEIGG--KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLL 92 PH I +ST GD+ L IGG K ++T+E+E L G +D VH KD+PT L Sbjct: 248 PHAFPITSMSTAGDQNLRSPLYVIGGEGKAIWTKELEVALEQGAVDAIVHCLKDVPTALP 307 Query: 93 KGLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVID 149 +GL+++A L RED RD + + L +L + SVIGTSS+RR A L R + D Sbjct: 308 QGLELAAVLEREDPRDALVVKAGLPYKVLDELPVGSVIGTSSVRRVAQLRRRYPHLVFSD 367 Query: 150 FRGKIETRLNKL--NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIET 207 RG I TRL KL N A++LA AG+ RL I L+ S GQG++ IE Sbjct: 368 VRGNINTRLAKLDAPNGPYTALILAAAGLVRLNMHARITAFLSSPVLLHSVGQGSLAIEV 427 Query: 208 HV----------NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + + +EL++ I ER+ L EL+G C + Sbjct: 428 RTPPEGADPTTNRDARIRELIRSIGDWRATFRAEAERSLLKELEGGCSIPVGVETRFDD 486 Score = 41.3 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 4/56 (7%) Query: 255 KGSTLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIR-FISNKNVFN 306 +G TL+ IV++ DG S + DA +G A + + + Sbjct: 600 EGRTLHLDAIVVSLDGSQESRYSASKHCTTVKDARELGIHVAHELAHKKGARAILE 655 Score = 36.3 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 6/28 (21%), Positives = 10/28 (35%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHK 32 + +R S LAL + + L Sbjct: 147 TLVLASRNSQLALVQSSHVSAMLEARFG 174 >gi|124805668|ref|XP_001350505.1| porphobilinogen deaminase [Plasmodium falciparum 3D7] gi|23496628|gb|AAN36185.1| porphobilinogen deaminase [Plasmodium falciparum 3D7] gi|70780284|gb|AAZ08393.1| porphobilinogen deaminase [Plasmodium falciparum] Length = 435 Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats. Identities = 103/363 (28%), Positives = 165/363 (45%), Gaps = 59/363 (16%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITN-RTLTEIG 59 K IGTR SPLAL + + R +M K N+ + T GD I + +++ G Sbjct: 59 KDEIIIGTRDSPLALKQSEKVRKKIMSYFKKMNKNINVTFKYIKTTGDNILDSKSVGLYG 118 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKG+FT+E++++LI+G +D VHS KD+P L +++S +L R+ I D F+S +S+ Sbjct: 119 GKGIFTKELDEQLINGNVDLCVHSLKDVPILLPNNIELSCFLKRDTINDAFLSIKYKSIN 178 Query: 120 DLALHS------------------------VIGTSSLRRKALLLRWRSDISVIDFRGKIE 155 D+ IGTSSLRR++ + +I V + RG I Sbjct: 179 DMNTVKSVSKTEDIHHINKKDSDHNNDTLCTIGTSSLRRRSQIKNRYKNIYVNNIRGNIN 238 Query: 156 TRLNKLNNNKAHAILLAYAGIKRL--------------------------------KKEK 183 TR+ KL N + A+++A GI+RL Sbjct: 239 TRIEKLYNGEVDALIIAMCGIERLIKKANLKHLLKNKEQKNICQPFLLKCNNKKCIDLCH 298 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V + LN P+ GQG I + +H N L+K IN++ + ER+FL +DG+ Sbjct: 299 VNIQKLNKNLIYPALGQGIIAVTSHKKNYFISSLLKNINNKKSEMMAQIERSFLYHIDGN 358 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C I G+ + +Y + I+ G ++V++ + IG +AA ++ I Sbjct: 359 CMMPIGGYTNMRNEDIYLHVIINDIHGYNKYQVTQKDTLYNYKEIGPNAAIKMKEIIGTE 418 Query: 304 VFN 306 FN Sbjct: 419 QFN 421 >gi|163839970|ref|YP_001624375.1| porphobilinogen deaminase [Renibacterium salmoninarum ATCC 33209] gi|162953446|gb|ABY22961.1| porphobilinogen deaminase [Renibacterium salmoninarum ATCC 33209] Length = 290 Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats. Identities = 89/295 (30%), Positives = 151/295 (51%), Gaps = 9/295 (3%) Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74 +A + L + + ++ + T GD + L+++GG G+F + + +++ Sbjct: 1 MARTQSQLIADQLSAIGGF---EVELVQIRTDGD-VLTGPLSQMGGTGVFVTALREAVLN 56 Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRR 134 G +D AVHS KD+PT G++I+A R ++RD S + +SL +LA + +GT S RR Sbjct: 57 GSVDFAVHSLKDLPTAAAPGMKIAAIPARAEVRDALCSRSNRSLAELATGAKVGTGSPRR 116 Query: 135 KALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDF 194 A L R+DI VID RG ++TRL +L N A++LA AG+ R+ + I E+ + Sbjct: 117 AAQLRAARADIEVIDIRGNVDTRLARL-ENDLDAVVLAAAGLGRIGRSAAISELFDDAVM 175 Query: 195 PPSPGQGAICIETHVNNP-KAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY 253 P+PGQGA+ +ET ++ P + + I+ D+ +V ERA LA L+ C + + FA Sbjct: 176 LPAPGQGALAVETALDVPTELAAALAAIDDADSRLAVTAERALLARLEAGCSAPVGAFAQ 235 Query: 254 CKGSTLYFYGIVLASDGKIFHE-VSRNGNRCD--AINIGRDAAQYIRFISNKNVF 305 KGS L + + DG + A +G + A+ + ++ Sbjct: 236 RKGSMLRLEACICSLDGSRVIRQAKATDGLAEVAATLLGIELAESMLADGAADLL 290 >gi|196232296|ref|ZP_03131150.1| porphobilinogen deaminase [Chthoniobacter flavus Ellin428] gi|196223664|gb|EDY18180.1| porphobilinogen deaminase [Chthoniobacter flavus Ellin428] Length = 307 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 91/279 (32%), Positives = 135/279 (48%), Gaps = 16/279 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL---TEIGG 60 K +GTR S LA+A T +L P I T+GD+ + +L E GG Sbjct: 2 KSIILGTRASALAVAQVELTTKALAAA--FPAMQIERREFVTRGDKKLDLSLLRANEAGG 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E L++G ID AVHS KD+P GL I+A L R DV I+ Q+L D Sbjct: 60 KGLFTKELEDALLNGSIDVAVHSLKDLPGHNPPGLDITAVLERAPTADVLITKQPQTLLD 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 L ++GTSS+RR L R D+ V ++RG ++TRL KL + I+LA AG++RL Sbjct: 120 LPQGVLLGTSSVRRARQLQWRRPDVRVEEWRGNVQTRLRKLAERDDVTGIILAQAGLERL 179 Query: 180 KKE----------KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 + ED P+ GQGAI +++ + + +++ I+H +T + Sbjct: 180 GHDLSAGRLETEHGKFYVTSLAEDLLPAIGQGAIALQSRADRAEVAAVLQKIDHRETHLA 239 Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS 268 + ER L G C + + I+ Sbjct: 240 IRAERELQRLLAGDCALPVGVRTKLLPGGIAMRAILFGP 278 >gi|121591883|ref|ZP_01679047.1| porphobilinogen deaminase [Vibrio cholerae 2740-80] gi|121546249|gb|EAX56552.1| porphobilinogen deaminase [Vibrio cholerae 2740-80] Length = 195 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 64/184 (34%), Positives = 97/184 (52%) Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ E Sbjct: 5 SGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELE 64 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L G Sbjct: 65 SRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTLQG 124 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I +A +G T++ +V DG G R A +G A+ + K Sbjct: 125 GCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQGAK 184 Query: 303 NVFN 306 + Sbjct: 185 EILE 188 >gi|284047684|ref|YP_003398023.1| porphobilinogen deaminase [Acidaminococcus fermentans DSM 20731] gi|283951905|gb|ADB46708.1| porphobilinogen deaminase [Acidaminococcus fermentans DSM 20731] Length = 288 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 89/296 (30%), Positives = 133/296 (44%), Gaps = 16/296 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K + TR S LALA L + I ++T GDR L +IGG+G+ Sbjct: 2 KKLIVATRGSRLALAQTHIVCRLLEEA----GVETEIRTITTAGDRDRIHALVKIGGRGI 57 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F EIE++L+SGE D AVHSAKD+P +L GL I+ + D RD + + L Sbjct: 58 FVREIERELLSGEADIAVHSAKDLPYQLASGLVIAGTPSQADPRDALVLLKERK---LEA 114 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+GT S RR + R ++ D RG + TRL+KL + AI+LA AGI+RL + Sbjct: 115 GSVVGTGSPRRIREISRVLPELVFRDIRGNVTTRLHKLERGEYDAIVLAMAGIQRLALDM 174 Query: 184 VIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +I E P+ QG I +E + + L++ I+ +TW ER + Sbjct: 175 EQFQIRPLSTEQVIPAGCQGIIGVECRQKDRELVRLLQQISDPETWRRFQWERQLFTSMK 234 Query: 242 GSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C + K + +V DGK + G + + + + Sbjct: 235 VDCSRPVGIHCRLLKSGRMELLAMV---DGKRARRL---GMEKEGKALCASLKEEL 284 >gi|301167270|emb|CBW26852.1| putative porphobilinogen deaminase [Bacteriovorax marinus SJ] Length = 512 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 76/280 (27%), Positives = 136/280 (48%), Gaps = 26/280 (9%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M KK ++IGTR S LA+ + + L + + + T+GD IT++ L ++ G Sbjct: 1 MSKKIYKIGTRGSLLAVTQCTQVKEELEKLT---GDQFELEIIKTQGDLITDKPLWQLDG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K FT+E+++ L++ ++D VHS KD+ ++ +G++++A R D+ +++K+ Sbjct: 58 KDFFTKELDEALLTNKVDMVVHSYKDLGSERPQGIKLAAITKRHFAHDILFIKN-ETIKN 116 Query: 121 LALHS--VIGTSSLRR----KALLLRWRSDISV----IDFRGKIETRLNKLNNNKAHAIL 170 L+ ++GTSS RR +A L + ++ RG + TR+ KL + + AI+ Sbjct: 117 LSNKKEFIVGTSSPRRIVNIEAQLSEYLPTDNIKVETKMLRGNVNTRIGKLVDGQYDAIV 176 Query: 171 LAYAGIKRLK------------KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV 218 LA GI+RL + + IL FP + QGA+ IE + N + + + Sbjct: 177 LALPGIERLAHSEKSLEELKVLLKDLNYMILPQSTFPSAASQGALAIECNEENTELYQKL 236 Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST 258 ++I + T V+ ER G C A+ G Sbjct: 237 QLIEDKVTVSEVSRERQAFNGYGGGCHLAVGVNVKRVGDN 276 >gi|118431819|ref|NP_148522.2| hydroxymethylbilane synthase [Aeropyrum pernix K1] gi|152031618|sp|Q9Y9J0|HEM3_AERPE RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|116063141|dbj|BAA81310.2| hydroxymethylbilane synthase [Aeropyrum pernix K1] Length = 307 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 88/294 (29%), Positives = 136/294 (46%), Gaps = 6/294 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+ R S L+L + L + H ++ + + GD ++R L IG G+FT Sbjct: 3 VRVAARGSRLSLLQVEQALEELSRYAGVSMHW-EVVRVKSAGDVWSDRPLESIGVVGVFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA-YLPREDIRDVFISHTAQS-LKDLAL 123 E+++ + SG D AVHS KDMPT G R RD IS ++DL Sbjct: 62 REVDRAVASGAADIAVHSLKDMPTSGYGGPLKIVYIASRPSARDALISRQGPGRVEDLEP 121 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S +GTSS RR+AL L + I V + RG ++TRL KL AI+ + AG+ RL Sbjct: 122 GSTLGTSSARRRALSLHYNPRIRVENLRGNLDTRLRKLREGLYDAIIASEAGLIRLGV-D 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V L+ FPP+PGQG + + V + +++++ ++ W ER L Sbjct: 181 VEYTPLDPSYFPPAPGQGFVAVVARVGSN-VEKMLRDLDKPPWWHVAWAERGVLEGARAG 239 Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C++ +A +A G S + L+ DG + G +A IG + + Sbjct: 240 CRTPVAAYAEPLGRSMVRVTAAALSPDGSRAYWARAEGRIEEARRIGVSLGEEL 293 >gi|325001831|ref|ZP_08122943.1| porphobilinogen deaminase [Pseudonocardia sp. P1] Length = 322 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 85/312 (27%), Positives = 147/312 (47%), Gaps = 19/312 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IGTR S LA+A + L H ++ +ST GDR + +T++G G+F Sbjct: 3 TLKIGTRPSKLAVAQSTTIADRLTAA----GHPSELVTVSTSGDR-SMAPVTQLG-VGVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L +G+ID AVHS KD+PT + L+I+A RED RD ++ + L +L Sbjct: 57 VSALRDALDAGDIDVAVHSFKDLPTAQPEHLRIAAVPGREDPRDALVT-GGRVLGELGRG 115 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT S RR A L + V+ RG ++TR+ K+ + + A+++A AG++RL + + Sbjct: 116 ARVGTGSPRRAAQLYALGQGLEVVPIRGNVDTRIGKVRSGELDAVVVAAAGLRRLGRIEE 175 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDGS 243 E+++ P+P QGA+ IE + ++++ V++ +V ERA LA L+ Sbjct: 176 ADELIDPLQMLPAPAQGALAIECRETDTGLADVLRSVLDDPGVRAAVAAERAVLATLEAG 235 Query: 244 CKSAIAGFAYCKG---------STLYFYGI--VLASDGKIFHEVSRNGNRCDAINIGRDA 292 C + + A L + V S G A +G Sbjct: 236 CTAPVGALADVVSDLDDDGRAVDRLSLRAVTGVGDITEGDVLRASVTGEMDAAEKLGATL 295 Query: 293 AQYIRFISNKNV 304 A + + +++ Sbjct: 296 AHELLDLGGEDL 307 >gi|302521530|ref|ZP_07273872.1| porphobilinogen deaminase [Streptomyces sp. SPB78] gi|302430425|gb|EFL02241.1| porphobilinogen deaminase [Streptomyces sp. SPB78] Length = 331 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 85/306 (27%), Positives = 127/306 (41%), Gaps = 14/306 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT----LTEIGGK 61 +G+R S LA A E ++P V ++ GD + +T G Sbjct: 29 VTVGSRGSALARAQVREMVERWER--EVPGVRFVRRVITEAGDADRSTPTVAGVTRRAGA 86 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYL-PREDIRDVFISHTAQSLKD 120 F+ E L+ GE+D VH KD+PT G + PRED+RD +L Sbjct: 87 SAFSSRQEAALVRGEVDVVVHCLKDLPTAPAPGTVLLRTPGPREDVRDALC---GATLAG 143 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT S RR A LL R D+ V+ RG + RL + A++LA G+ RL Sbjct: 144 LPTGARVGTGSTRRVAQLLALRPDLEVVPVRGNVPARLARTRT--LDAVVLAAVGLHRLG 201 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E L+ E +PP+PGQGA+ I+ + +A L+ T V ER LAEL Sbjct: 202 LADEITEYLDPEAYPPAPGQGALAIQVRE-DSEAARLLAASGDAATDAEVRAERVLLAEL 260 Query: 241 DGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G C + + + + L + V DG + G + + A + Sbjct: 261 HGGCSVPLGTWTSRPSPTLLRLHAAVTTPDGTHQIAATAQGPSAEPEKLALTVAASLLAQ 320 Query: 300 SNKNVF 305 + Sbjct: 321 GAARIL 326 >gi|153865130|ref|ZP_01997767.1| Porphobilinogen deaminase [Beggiatoa sp. SS] gi|152145375|gb|EDN72233.1| Porphobilinogen deaminase [Beggiatoa sp. SS] Length = 211 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 113/207 (54%), Gaps = 1/207 (0%) Query: 101 LPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK 160 + RE+ D F+S+T +L L +++GTSSLRR++ LL R D+ + RG + TRL+K Sbjct: 1 MRREEPFDAFVSNTYATLAALPEGAIVGTSSLRRQSQLLAHRPDLQIRSLRGNVGTRLSK 60 Query: 161 LNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220 L+N AI+LA G+KRL + I+EI++ P+ GQGAI IE ++ + ++ + Sbjct: 61 LDNGDYDAIVLAAVGLKRLGLVERIREIIDSTIMLPAIGQGAIGIECRQDDLETRQHIDN 120 Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRN 279 +N DT D V ERA L+G C+ IAG+A + S L G+V +G+ + Sbjct: 121 LNDPDTQDCVIAERALNESLEGGCQVPIAGYAEIQSSENLTMRGLVGDIEGQHILRHNLQ 180 Query: 280 GNRCDAINIGRDAAQYIRFISNKNVFN 306 G R A +G+ A+ + + Sbjct: 181 GARHLAAELGKSLAKVLLTQGAAQILE 207 >gi|28572887|ref|NP_789667.1| porphobilinogen deaminase [Tropheryma whipplei TW08/27] gi|28411020|emb|CAD67405.1| porphobilinogen deaminase [Tropheryma whipplei TW08/27] Length = 321 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 96/331 (29%), Positives = 153/331 (46%), Gaps = 44/331 (13%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA A + + ++ DV + ++I S R + G F Sbjct: 3 PLRIGTRSSLLATAQTAQVQKTMRDVFLLDTQQVLIQTGSV---RRRD---------GSF 50 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L+ GE D AVHS KD+P +G I+A LPRED DV + +L L Sbjct: 51 VAALRTALLEGECDLAVHSLKDIPIAPHEGTLITAVLPREDPCDVLCARKDLTLTTLPSG 110 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT+S RR+A +L +R D+ V+ RG I+ RL L+ AI+L+ AG+KR+ +E Sbjct: 111 AKVGTASARRRAQILNFRPDLDVVSLRGNIDKRLIHLDT--LDAIVLSAAGLKRIDREDA 168 Query: 185 IKEILNIEDFPPSPGQGAICIE-THV--NNPKAQELVKV-INHEDTWDSVNCERAFLAEL 240 I E +I D+P + GQG++ IE ++P+ + V +++ + ER L+ L Sbjct: 169 ITESFDIHDWPTAAGQGSLAIEVCRAQLDDPQNRVAVTYRLDNPMARVTTTAERGVLSLL 228 Query: 241 DGSCKSAIAGFA--YCKGSTLYFYGIVLASDGKIFHEV--------------------SR 278 C S IA A +L + V + DGKIF E S Sbjct: 229 QADCFSPIAVHAVYTANDKSLRLHAKVFSRDGKIFCESIRFARLVKQLTDTNQNHTKNSG 288 Query: 279 NGNRCDAINIGRDAAQ----YIRFISNKNVF 305 + + +A+ + A+ + + + + Sbjct: 289 SDDIGNALEVAMTLAKTVVDELLSKNAREIL 319 >gi|111220451|ref|YP_711245.1| porphobilinogen deaminase 1 [Frankia alni ACN14a] gi|111147983|emb|CAJ59649.1| Porphobilinogen deaminase 1 (PBG 1) (Hydroxymethylbilane synthase 1) (HMBS 1) (Pre-uroporphyrinogen synthase 1) [Frankia alni ACN14a] Length = 402 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 91/364 (25%), Positives = 149/364 (40%), Gaps = 79/364 (21%) Query: 13 SPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKL 72 S LAL + + L + + ++P+ T GDR + +++IGG G+F + L Sbjct: 36 SALALTQSGMIAAQLRERV---GCAVDLVPIVTAGDR-SPAEISQIGGTGVFVSALRDAL 91 Query: 73 ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSL 132 ++GEID AVHS KD+PT GL ++A RED RDV +S + + L L + + T + Sbjct: 92 LAGEIDLAVHSLKDLPTATPPGLVLAAVPTREDTRDVLVSPSGRGLAALGPGARVATGAP 151 Query: 133 RRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192 RR A L V+ RG ++TRL K + + A++LAYAG+ RL + + EIL+ E Sbjct: 152 RRAAQLRALGLGFDVVAIRGNVDTRLKKAIDGEVDAVVLAYAGLARLDRLDAVTEILDPE 211 Query: 193 DFPPSPGQGAICI----------------------------------------------- 205 P+PGQGA+ + Sbjct: 212 VMLPAPGQGALAVECAAEAGLRLAGPARALVAAGAGDHADGDRPGAEAGRDGRGRGPDVG 271 Query: 206 ----ETHVN-----NPKAQELVK-VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK 255 +T + + EL++ V++ + ++ ERAFLA ++ C + + A + Sbjct: 272 RNSGQTRSDHGQPLDGGLAELLRFVLDDASSSVAIRAERAFLAGIEAGCTAPVGALAVAE 331 Query: 256 ------------------GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L +V A DG G+ D +G+ A + Sbjct: 332 PAPAAAVGTVAPAGDASPAGRLRLRAVVAAPDGSTVLRRDVTGSAVDPEALGQRLADDLL 391 Query: 298 FISN 301 Sbjct: 392 SAGA 395 >gi|16611929|gb|AAL27412.1|AF429957_3 porphobilinogen deaminase [uncultured bacterium] Length = 299 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 75/268 (27%), Positives = 128/268 (47%), Gaps = 15/268 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+ TR S LAL A L+ + ++ + T+GDR R ++ G+G FT Sbjct: 4 VRLATRGSRLALWQAEWVAKQLVQQGA----EVELVVVETQGDREK-RPFAQMQGQGFFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH-----TAQSLKD 120 + +++ ++ G D AVHS KD+P+ GL+I+A PRED R++ + Sbjct: 59 KAVQEAVLEGRADFAVHSYKDLPSARPAGLEIAAVPPREDPRELLLVRLQAVDQVAPGLP 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+S+ RR+A L R D+S+++ RG + TR+ KL + A+LLAYAG++RL Sbjct: 119 LRAGARVGSSAARRQAQLAHLRPDLSLLELRGNVLTRVEKLRQGEYDAVLLAYAGVRRLG 178 Query: 181 KEKVIKEIL--NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV-NCERAFL 237 + P+P QGA+ +E ++ + + L++ ++ + Sbjct: 179 LDLSPFHWQVLPPTLLVPAPAQGALALECRQDDKRLRPLLEPLDDPSAGVRCGGA--GLM 236 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIV 265 A L G C+ A+ A L Sbjct: 237 ARLAGGCQLALGALAQETPEGLQLLAWY 264 >gi|315650219|ref|ZP_07903294.1| hydroxymethylbilane synthase [Eubacterium saburreum DSM 3986] gi|315487576|gb|EFU77884.1| hydroxymethylbilane synthase [Eubacterium saburreum DSM 3986] Length = 309 Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 88/277 (31%), Positives = 135/277 (48%), Gaps = 20/277 (7%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ RIGTR S LALA ++ + P I +P++T GD+ + +L EIGGKG Sbjct: 4 KEIIRIGTRKSALALAQTKLVGDAVK--NSFPHIKIEYVPMNTIGDKRLDISLQEIGGKG 61 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS----L 118 LFT+E+E+ LI G+ID A+HSAKD+P + L++ L R +RDV + + Sbjct: 62 LFTKELEEALIKGDIDLAIHSAKDLPLEFDNRLKLMPVLKRGAVRDVLVVKNDCPVDLQI 121 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 KDL IGTSS RR + +I ++ RG + TR+ K+ + ++LA AG+ R Sbjct: 122 KDLPRGFRIGTSSKRRSEQAMLLNHNIKIVPIRGNVLTRIGKIFSGDTDGVILARAGLDR 181 Query: 179 L------------KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226 L +KV + D P+P QG +C + + E++K I ED Sbjct: 182 LLADTNCAGECDKILQKVNITDIKETDILPAPAQGILCGQYASD--YISEVLKKIQDEDC 239 Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYG 263 N ER +L+ L+ C ++ + Sbjct: 240 NILFNAERKYLSVLEADCHTSAGIYIKKDRDNYSIKA 276 >gi|28493699|ref|NP_787860.1| porphobilinogen deaminase [Tropheryma whipplei str. Twist] gi|28476741|gb|AAO44829.1| porphobilinogen deaminase [Tropheryma whipplei str. Twist] Length = 321 Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 96/331 (29%), Positives = 153/331 (46%), Gaps = 44/331 (13%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA A + + ++ DV + ++I S R + G F Sbjct: 3 PLRIGTRSSLLATAQTAQVQKTMRDVFLLDTQQVLIQTGSV---RRRD---------GSF 50 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L+ GE D AVHS KD+P +G I+A LPRED DV + +L L Sbjct: 51 VAALRTALLEGECDLAVHSLKDIPIAPHEGTLITAVLPREDPCDVLCARKDLTLTTLPSG 110 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT+S RR+A +L +R D+ V+ RG I+ RL L+ AI+L+ AG+KR+ +E Sbjct: 111 AKVGTASARRRAQILNFRPDLDVVSLRGNIDKRLIHLDT--LDAIVLSAAGLKRIDREDA 168 Query: 185 IKEILNIEDFPPSPGQGAICIE-THV--NNPKAQELVKV-INHEDTWDSVNCERAFLAEL 240 I E +I D+P + GQG++ IE ++P+ + V +++ + ER L+ L Sbjct: 169 ITESFDIHDWPTAAGQGSLAIEVCRAQLDDPQNRVAVTYRLDNPMARVTTTAERGVLSLL 228 Query: 241 DGSCKSAIAGFA--YCKGSTLYFYGIVLASDGKIFHEV--------------------SR 278 C S IA A +L + V + DGKIF E S Sbjct: 229 QADCFSPIAVHAVYTANDKSLGLHAKVFSRDGKIFCESIRFARLVKQLTDTNQNHTKNSG 288 Query: 279 NGNRCDAINIGRDAAQ----YIRFISNKNVF 305 + + +A+ + A+ + + + + Sbjct: 289 SDDIGNALEVAMTLAKTVVDELLSKNAREIL 319 >gi|16081675|ref|NP_394046.1| porphobilinogen deaminase [Thermoplasma acidophilum DSM 1728] gi|13627133|sp|Q9HKM5|HEM3_THEAC RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|10639740|emb|CAC11712.1| porphobilinogen deaminase related protein [Thermoplasma acidophilum] Length = 295 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 89/269 (33%), Positives = 135/269 (50%), Gaps = 8/269 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA+ A S++ + + I+ ++GD L IG G+F Sbjct: 3 TIRIGTRPSRLAVRQAEIVASAIRHA----GYEVEIVKYRSEGDSDLKSPLYSIGKTGVF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 E + ++SG+ID AVHSAKD+P ++ + L+ISA +PR D +S L L Sbjct: 59 VERLNSLILSGDIDAAVHSAKDIPYEIDRRLRISAVMPRGRFEDALVSEN--PLSKLPPG 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SVIGTSSLRR+ +L R D+ V + RG ++TR+ K+ + I++A A I RL+ Sbjct: 117 SVIGTSSLRRRYQILYQRKDVKVSNIRGNVDTRIEKMRSEGMAGIVMALAAIDRLELNLR 176 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E F P+P QG I + + + KA E++ IN DT+D + ER+ L C Sbjct: 177 -YWPFDPEKFVPAPNQGIIAVVS-EDGSKASEVLSSINDADTYDDMMAERSITQGLKLGC 234 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 + + + G + A DG Sbjct: 235 STPVGILSRHTGKGMRILAQFFAMDGSDM 263 >gi|297567358|ref|YP_003686330.1| porphobilinogen deaminase [Meiothermus silvanus DSM 9946] gi|296851807|gb|ADH64822.1| porphobilinogen deaminase [Meiothermus silvanus DSM 9946] Length = 304 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 79/273 (28%), Positives = 135/273 (49%), Gaps = 14/273 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LA A + L D ++ + T+GDR +++ G Sbjct: 1 MSR--VRIATRGSRLARWQAEWVAAQLQDQ----GIASTLVIVETQGDRER-VAFSQMQG 53 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 +G FT+ ++ + G D AVHS KD+P+ GL ++A RED R+ + + Sbjct: 54 QGFFTKAVQDAVREGRADLAVHSLKDLPSAPTPGLVLAAIPIREDPREALLVLPSAWDAQ 113 Query: 121 -----LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 LA + +G+S++RR+A L + R D+ +++ RG + TR+ KL + AILLA+AG Sbjct: 114 APALPLAPGARVGSSAVRRQAQLAQLRPDLKLLELRGNVPTRVEKLQSGGYEAILLAWAG 173 Query: 176 IKRLKKE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 +KRL + + +L +F P+PGQGA+ +E + + + +++ ++ +V E Sbjct: 174 LKRLGLDLGGLAVRLLEPREFVPAPGQGALALECREEDTQLRGVLQGLDDPTARLTVGIE 233 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVL 266 R +A L G C+ A+ A Sbjct: 234 RGLMARLQGGCQLALGASAQRVQGGWQLLAWYG 266 >gi|167844775|ref|ZP_02470283.1| porphobilinogen deaminase [Burkholderia pseudomallei B7210] Length = 222 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 85/212 (40%), Positives = 127/212 (59%), Gaps = 2/212 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQE 216 I+ +L+++D P+ GQGA+ IE Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAA 222 >gi|282857646|ref|ZP_06266861.1| hydroxymethylbilane synthase [Pyramidobacter piscolens W5455] gi|282584522|gb|EFB89875.1| hydroxymethylbilane synthase [Pyramidobacter piscolens W5455] Length = 245 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 81/251 (32%), Positives = 123/251 (49%), Gaps = 11/251 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE----IG 59 K R G+R S LALA ++ H P + + ++P++T+GD + +E G Sbjct: 2 KTLRFGSRTSDLALAQTRLVMDAVGRAH--PEYRLELVPIATRGDVDM-KPFSEASDTFG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 KGLFT E+E+ L+ G ID AVHS KD+P + L + A R D RDV Sbjct: 59 IKGLFTRELEEALLDGSIDVAVHSLKDLPAVQDERLPLLACFRRGDPRDVLALPAGAEAM 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 + ++IG SS RR+ L V RG + TRL KL+ + A++LA AG++RL Sbjct: 119 N---GALIGCSSARRRLQALDLFEGAEVRPVRGNVGTRLRKLDEGQFSALILAAAGLERL 175 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++++ P+PGQG + + + ++ + I D D ERAF A Sbjct: 176 GLRARVSRYFSLDEIVPAPGQGILACQGRAGDKN-EDWLDAIFDPDATDCARAERAFSAA 234 Query: 240 LDGSCKSAIAG 250 L G C S + Sbjct: 235 LGGGCASPVGA 245 >gi|297622476|ref|YP_003703910.1| porphobilinogen deaminase [Truepera radiovictrix DSM 17093] gi|297163656|gb|ADI13367.1| porphobilinogen deaminase [Truepera radiovictrix DSM 17093] Length = 320 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 84/269 (31%), Positives = 133/269 (49%), Gaps = 13/269 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGGKGL 63 RI TR S LAL A R L + ++PL T+GDR + G+G Sbjct: 20 VRIATRKSALALWQATWVRERLAAL----GVATELVPLDTQGDRTQEAGTPFRLMPGQGF 75 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD--- 120 FT+ ++ ++ G D AVHS KD+P+ L GL+++A RED RDV + + + Sbjct: 76 FTKAVQDAVLEGRADVAVHSHKDLPSARLAGLELAAVTEREDPRDVLLVRPGAARPESAA 135 Query: 121 --LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L +V+GTS+ RR+A L R D+ V + RG + TR+ L + A++LA AG+ R Sbjct: 136 LPLVEGAVVGTSAARRQAQLRHLRPDVRVAELRGNVPTRVRALREGRYDAVVLAAAGLAR 195 Query: 179 LKK--EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 L + L+ + F P+P QGA+ +E + + L+ ++ D + +V ER Sbjct: 196 LALDLSDLTVYPLDPKRFVPAPAQGALALEIRRGDAELAALLTELHAPDAYQTVAAERGL 255 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIV 265 + L G C+ A+ +A +G L Sbjct: 256 MGMLQGGCQLALGAYAALQGGELELTAWY 284 >gi|76801314|ref|YP_326322.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Natronomonas pharaonis DSM 2160] gi|76557179|emb|CAI48754.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Natronomonas pharaonis DSM 2160] Length = 361 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 84/357 (23%), Positives = 138/357 (38%), Gaps = 60/357 (16%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+ TR S LAL A +L + + ++ + T GD + + + +G G F Sbjct: 4 TIRLATRGSDLALRQAQRVADALDSRRR----TVELVEVETTGDAVRDELIHRLGKTGAF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +++K+I G++D AVHS KDMPT+ L ++ R DV ++ +L L Sbjct: 60 VRSLDEKVIDGDVDAAVHSMKDMPTEFPDELVVAGVPERASPGDVLVTPDGDTLDSLPDG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAI--------------- 169 + +GTSSLRRKA LL R D+ V RG ++TR+ KL A Sbjct: 120 ATVGTSSLRRKAQLLAARPDLDVQPLRGNVDTRVQKLLAPSLQAEHERRLEAEDDEGEAE 179 Query: 170 --------------LLAYAGIKRLKKEKVIKEILN------------------------- 190 + + ++++ + +EI Sbjct: 180 DEDGDDADRYDRPPEEWFDDLAEIERQALGREIETRFDGIVLAEAGLQRTGLLAQVETER 239 Query: 191 -IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 E F P+ GQGA+ + + Q L ++H T ER L L G C + + Sbjct: 240 LPETFVPAAGQGALAVTACDGDV-GQTLQNELDHPRTRVETTVERTILGTLGGGCVAPVG 298 Query: 250 GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 A +G + VL+ DG E +R+ R+ A + ++ Sbjct: 299 IHAVVRGEYVQASVRVLSQDGTEEIEATRDLPIERHPEAAREFADELADRGAADLIQ 355 >gi|170044628|ref|XP_001849943.1| porphobilinogen deaminase [Culex quinquefasciatus] gi|167867697|gb|EDS31080.1| porphobilinogen deaminase [Culex quinquefasciatus] Length = 474 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 79/243 (32%), Positives = 122/243 (50%), Gaps = 31/243 (12%) Query: 13 SPLALAHAFETRSSLMDVHKIPPHNIVII------------------------PLSTKGD 48 S LAL S L ++ P I ++T GD Sbjct: 167 SKLALIQTKYVISCLQKLN--PDVVYEIRKYFQHVHLCWHVPSYLLAFFLSPDTMTTVGD 224 Query: 49 RITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRD 108 R+ N++L +IG K LFT+++E L +G +D VHS KD+PT L G+ I A L R+D RD Sbjct: 225 RVLNKSLPKIGEKSLFTKDLEDALRTGGVDFVVHSLKDLPTALPLGMAIGAVLERDDPRD 284 Query: 109 VFI---SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NN 163 + +H ++L L SV+GTSSLRR A L R ++ V D RG + TRL KL + Sbjct: 285 ALVLNEAHRGRTLSTLPKGSVVGTSSLRRSAQLARKYENVVVCDIRGNLNTRLAKLDADG 344 Query: 164 NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223 +K I+LA AG+ R+ + +++ + + GQGA+ +E N+ +++ + H Sbjct: 345 SKFAGIILAQAGLVRMGWNARVSQVIEPGEILYAVGQGALAVECRSNDEYILDMLSKLCH 404 Query: 224 EDT 226 +T Sbjct: 405 LET 407 >gi|28202885|gb|AAO35329.1| porphobilinogen deaminase [Clostridium tetani E88] Length = 218 Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 76/218 (34%), Positives = 112/218 (51%), Gaps = 3/218 (1%) Query: 79 CAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALL 138 AVHS KD+P ++ I A RED+RD F+S +L S IGTSS RR + + Sbjct: 1 MAVHSMKDVPYEVPSMFYIGAIPRREDVRDAFVSRDGTKFMELPSGSKIGTSSRRRSSQI 60 Query: 139 LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSP 198 R D+ V+ RG ++TRL K+ +LA AG+KRL E+VI + + E+ P+ Sbjct: 61 KILRPDVEVVPIRGNVQTRLRKIEEMNLAGTILAVAGLKRLNMEEVITDYFSPEEMVPAI 120 Query: 199 GQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST 258 GQGA+ IE + +K I+HE+T V ER+F+ L G C S I A + Sbjct: 121 GQGALGIEI-KKYEDVIDYIKGIDHEETRICVEGERSFMEALKGDCHSTIGAHAIVENDL 179 Query: 259 LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +Y G + +GKI + G + + +G+ A I Sbjct: 180 MYMTG-IFEVNGKIVKKD-IEGKKENYKQLGKTLADRI 215 >gi|331003909|ref|ZP_08327398.1| porphobilinogen deaminase [Lachnospiraceae oral taxon 107 str. F0167] gi|330411929|gb|EGG91329.1| porphobilinogen deaminase [Lachnospiraceae oral taxon 107 str. F0167] Length = 311 Score = 229 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 96/314 (30%), Positives = 149/314 (47%), Gaps = 23/314 (7%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K RIGTR S LALA + ++ ++ P I IP+ST GD+ + +L EIGGK Sbjct: 3 NKNIIRIGTRKSALALAQSKLVGDAI--LNSFPHIKIEYIPMSTAGDKRLDISLQEIGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----QS 117 GLFT+E+E+ LI+G ID AVHSAKD+P + L++ L R + D+ Sbjct: 61 GLFTKELEEALINGNIDLAVHSAKDLPLEFDHRLKLMPVLKRAPVNDILAVKKDFLKETD 120 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 +K L IGTSS RR+ LL DI +I RG + TR+ K+ +N ++LA AGI+ Sbjct: 121 IKTLPEGFRIGTSSKRREKQLLFLNKDIKIIPVRGNVITRIEKIFSNDVDGVILAAAGIE 180 Query: 178 RLK------------KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED 225 RLK +K+ + +D P+P QG +C E N + + +++ I + Sbjct: 181 RLKANDKYAAEFKDILDKISIINIREKDILPAPAQGILCAE--YANDEMETILEKIQDGE 238 Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA 285 ER +LA L C ++ + Y +GK + + + Sbjct: 239 CNTLFFAERKYLAVLQADCHTSAGIYIYKALDKYSIKAYF---EGKYLEKNMIDSSEKAL 295 Query: 286 INIGRDAAQYIRFI 299 + + A ++ Sbjct: 296 LEAVEELAGRLKRK 309 >gi|70606576|ref|YP_255446.1| porphobilinogen deaminase [Sulfolobus acidocaldarius DSM 639] gi|68567224|gb|AAY80153.1| porphobilinogen deaminase [Sulfolobus acidocaldarius DSM 639] Length = 296 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 87/293 (29%), Positives = 138/293 (47%), Gaps = 14/293 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI R S L+ L ++ +I + TK D ++ L +G KG+F Sbjct: 3 IRIAARGSLLSRIQVKMVEDKLRNL----GIETELIVVKTKADLFQDKPLNSLG-KGVFE 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+ + +I+GE D AVHS KDM + + + L + LPR+ D ++ + L ++ Sbjct: 58 KEVNEAVINGEADIAVHSMKDMLSDMDEKLVLYGVLPRDSPYDSLVAE--KDLFNIESGK 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS+RR++++ +R D+ V D RG I+TRL K + + I++A A IKRL V Sbjct: 116 VIGTSSIRRRSMISFYRRDLVVKDLRGNIDTRLKKYQSKEYDGIVIAEAAIKRLN-SVVR 174 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ + P QG I I VN K + L + +N E T ER + L G C Sbjct: 175 YYKIDPKIITPEANQGIIAIVGRVN-EKLKTLFRELNDERTLKEALVERTVVKLLGGGCH 233 Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNG-NRCDAINIGRDAAQYI 296 S I A + + SD K +++ G R D +G + + Sbjct: 234 SPIGILASMISENEFNVISTYVISDKK---KITIEGIYRGDPTTVGEKVVKDM 283 >gi|294054671|ref|YP_003548329.1| porphobilinogen deaminase [Coraliomargarita akajimensis DSM 45221] gi|293614004|gb|ADE54159.1| porphobilinogen deaminase [Coraliomargarita akajimensis DSM 45221] Length = 284 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 89/250 (35%), Positives = 126/250 (50%), Gaps = 14/250 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR SPLAL R+ L + K+P + + L+T+ D + +L + GG GLFT Sbjct: 3 ILIATRKSPLALKQTEMVRAWLAE--KLPNDHYEELQLTTQVDERLSWSLEKRGGIGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L++ + AVHSAKDMPT L I+ YLPR DV + ++ Sbjct: 61 KELEEALLANKATLAVHSAKDMPTTFQDDLCIAGYLPRARANDVIVKR-----SEIESPK 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEK- 183 I TSS RR+A L +D RG + TRL K+ +A A LLA AG+ RL + Sbjct: 116 RIATSSPRRRAQLALLNNDAEWTTLRGNVGTRLRKIAEAQEADATLLAAAGLNRLDIQSY 175 Query: 184 --VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + L IE P+PGQ AI I+ + E + + EDT +V ER FL L Sbjct: 176 DGLDFIELPIEQMVPAPGQAAIAIQCREKD---LEKYQDLFCEDTKLAVTLEREFLHRLG 232 Query: 242 GSCKSAIAGF 251 G C++ + Sbjct: 233 GGCQTPVGAH 242 >gi|291518806|emb|CBK74027.1| porphobilinogen deaminase [Butyrivibrio fibrisolvens 16/4] Length = 239 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 109/206 (52%), Gaps = 7/206 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++GTR S LAL L P + ++ + T GD +R L +IG KGLF Sbjct: 3 IKVGTRGSKLALVQTNYVIEQLKKA--FPENEYEVVVIKTTGDIDQSRPLDQIGSKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L++ EI AVHS KDMP+K KG + RED RDV I S+++L ++ Sbjct: 61 DEIERALVADEIQLAVHSMKDMPSKPAKGCVFAKSWTREDARDVIIFREVDSIEELPKNA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-----AHAILLAYAGIKRLK 180 I T S RR LL R D+ + RG I+TRL KL I+LA AG+ RLK Sbjct: 121 KIATGSKRRSYQLLSLRPDLELCPIRGNIDTRLRKLVEGNSDGTILDGIVLAAAGLNRLK 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIE 206 +IL +++ PSP QG + IE Sbjct: 181 ISLDHYQILEVDEMIPSPAQGTLAIE 206 >gi|256026474|ref|ZP_05440308.1| porphobilinogen deaminase [Fusobacterium sp. D11] gi|289764485|ref|ZP_06523863.1| porphobilinogen deaminase [Fusobacterium sp. D11] gi|289716040|gb|EFD80052.1| porphobilinogen deaminase [Fusobacterium sp. D11] Length = 220 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 78/220 (35%), Positives = 104/220 (47%), Gaps = 3/220 (1%) Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS 143 KDMP KGL A RED RDV +S L L + IGTSSLRR L R Sbjct: 1 MKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVTLPQGAKIGTSSLRRAMNLKAVRP 59 Query: 144 DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAI 203 D + RG I TRL KL AI+LA AG+KR I E L+ E FPP+P QG + Sbjct: 60 DFEIKHLRGNIHTRLKKLETEDYDAIILAAAGLKRTGMTDKITEYLSGEVFPPAPAQGVL 119 Query: 204 CIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYG 263 I+ N+ + +E++K I++E+ V ER F DG C + + ++ G + F Sbjct: 120 YIQCRENDKEIKEILKSIHNENVAKIVEIEREFSKIFDGGCHTPMGCYSQVNGDKIKFTA 179 Query: 264 IVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 + L GK + I AA+ I+ NK Sbjct: 180 VYLDE-GKQ-IRAVIEDDLTKGKEIAYMAAEEIKNKINKG 217 >gi|13541465|ref|NP_111153.1| porphobilinogen deaminase [Thermoplasma volcanium GSS1] gi|25453027|sp|Q97B26|HEM3_THEVO RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|14324849|dbj|BAB59775.1| hydroxymethylbilane synthase [Thermoplasma volcanium GSS1] Length = 297 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 82/266 (30%), Positives = 134/266 (50%), Gaps = 8/266 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IGTR S LA+A A SSL + + I+ + GD T + IG G+F Sbjct: 2 KIKIGTRPSNLAVAQANMVASSLEAI----GIDTEIVKHRSAGDIDTKNPIYSIGKTGVF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +++ ++ GEID AVHSAKD+P+++ L I+A L R D +S L+ L + Sbjct: 58 VQDLNNMILRGEIDVAVHSAKDIPSEIENRLTIAATLKRGSFNDALVSK--YDLRSLPIS 115 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSS+RR L R D+ + RG IETR+ K++ AI++A A I+RL V Sbjct: 116 AKVGTSSIRRIFQLKYARQDLKFENIRGNIETRIAKMSELGLDAIVMAEAAIQRLGL-NV 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 L+ F P+P QG I + + +++++ IN E+T++ + ER+ + +L C Sbjct: 175 EYSKLDENKFVPAPNQGIIAVVSKKEGT-VRKILEEINDENTFEEMQIERSVVQQLKLGC 233 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG 270 + + + G + G Sbjct: 234 STPVGILSRPSGKGHKIIAQFFSMQG 259 >gi|217070488|gb|ACJ83604.1| unknown [Medicago truncatula] Length = 214 Score = 227 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 95/211 (45%), Positives = 126/211 (59%), Gaps = 4/211 (1%) Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS 143 KD+PT L + + LPRED+RD FIS +A SL DL SVIGT+SLRRK+ +L Sbjct: 1 MKDVPTYLPEKTILPCNLPREDVRDAFISLSAASLADLPAGSVIGTASLRRKSQILHRYP 60 Query: 144 DISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGA 202 +SV D FRG ++TRL KL+ A LLA AG KRL + + L+I+D P+ QGA Sbjct: 61 SLSVQDNFRGNVQTRLRKLSEGVVKATLLALAGPKRLNMTENVTSTLSIDDMLPAVAQGA 120 Query: 203 ICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA-YCKGSTLYF 261 I I N+ K E + +NHE+T +++CERAFL LDGSC++ IAG+A K F Sbjct: 121 IGIACRSNDDKMAEYLASLNHEETRLAISCERAFLTTLDGSCRTPIAGYASRDKDGNCLF 180 Query: 262 YGIVLASDGKIFHEVSRNGN--RCDAINIGR 290 G+V + DG E SR G D + +GR Sbjct: 181 RGLVASPDGTRVLETSRIGPYAYEDMMKMGR 211 >gi|297170423|gb|ADI21455.1| porphobilinogen deaminase [uncultured gamma proteobacterium HF0070_10G19] Length = 302 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 83/275 (30%), Positives = 139/275 (50%), Gaps = 10/275 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI R SPLA+ A + ++ + +IP+ + GD +T++ L++IGGKGLF Sbjct: 3 IRIACRKSPLAVLQANKFIEAIQKKYGK-EIKCRLIPMHSAGD-LTDKDLSQIGGKGLFI 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS--LKDLAL 123 E+E L S D AVHS KD+P KL G +I + L R + DV I ++DL Sbjct: 61 SELESALASDNADVAVHSLKDVPAKLNDGFEIISCLERGNPNDVIILKQNGPSVIQDLNN 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 HS I TSS RRKA + + RG I TR++K + +L+A ++RL ++ Sbjct: 121 HSKIATSSPRRKAQWKIYNPTFEFVPIRGNISTRISKFLESDLDGLLMAATALERLNIQE 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVN--NPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + N +D PS QG I +E ++ + + +++++ +NH++++++ ER + LD Sbjct: 181 HHYDEFNYQDVVPSVCQGIIGMEIYLGTISQEKRQIIQSVNHQNSFNAALMEREIIKSLD 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV 276 C S I +Y +G +++ Sbjct: 241 ADCMSPIGVICR--DKMIYLDA--FNKEGTEIYQL 271 >gi|306817540|ref|ZP_07451283.1| hydroxymethylbilane synthase [Mobiluncus mulieris ATCC 35239] gi|304649582|gb|EFM46864.1| hydroxymethylbilane synthase [Mobiluncus mulieris ATCC 35239] Length = 360 Score = 226 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 94/346 (27%), Positives = 143/346 (41%), Gaps = 51/346 (14%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++P IGTR S LAL + L + I T+GD +L+ +GG Sbjct: 7 AQRPLVIGTRGSKLALTQTQMVAADLEQR----GLAVRIETFVTEGDTNR-ASLSSLGGV 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F + L+ G D VHS KD+PT + GL ++A R D DV ++ L DL Sbjct: 62 GVFAAALRVALLEGRCDLVVHSLKDLPTVEVPGLVVAAIPARVDPADVLVARDGLRLADL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------------NK 165 + +GT S RR L R D+S++D RG + TR+ ++ Sbjct: 122 PAAARVGTGSPRRARQLAAARPDLSLVDIRGNVPTRIGRVRGLGTRAEQIGLDQDRAKED 181 Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE------LVK 219 A++LA AG++RL E V + L E P+ GQGA+ +ET + A+E ++ Sbjct: 182 LDAVVLARAGLRRLGVEDVATDDL-SETILPAGGQGALALETVADGLAAEEGRILAQTLR 240 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK---------GSTLYFYGIVLASDG 270 +++ E T V+ ERA L L+ C + + L V+ +G Sbjct: 241 IVDDEPTRLEVSAERALLRYLEAGCAAPLGVRGQLTWENNATELLAGVLELRARVVGDNG 300 Query: 271 KIFHEVSRN-----GNRCD--------AINIGRDAAQYIRFISNKN 303 EVS G D A +G D A + Sbjct: 301 -ESVEVSGETTVLLGTDADQRDFALAAAEQLGVDLATELLANGAGE 345 >gi|332295808|ref|YP_004437731.1| porphobilinogen deaminase [Thermodesulfobium narugense DSM 14796] gi|332178911|gb|AEE14600.1| porphobilinogen deaminase [Thermodesulfobium narugense DSM 14796] Length = 297 Score = 226 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 88/301 (29%), Positives = 141/301 (46%), Gaps = 11/301 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ IGTR S LAL A + I II GD+ L E Sbjct: 1 MIER-IVIGTRGSKLALTQARYVAEFINKFDSTIKIEIKIIKT--TGDK-LMVALHEAPE 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117 +GLF +EIE+ L++ +ID AVHS KDMP + + L+I A RED DV + ++ Sbjct: 57 RGLFVKEIEEALLNKDIDLAVHSMKDMPAEAVSELEIFAVPVREDPSDVIVPRKELSIEN 116 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L D++ +SV TSSLRR +LL + + + D RG I+TRL KL+ +++A A + Sbjct: 117 LDDISPNSVFATSSLRRISLLNNFFTFKEIKDIRGNIDTRLKKLDEGFCDYLIMAKAALN 176 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIE-THVNNPKAQELVKVINHEDTWDSVNCERAF 236 RL K L+ F P+ QGA+ I+ + + +++K ++ +T S + ER Sbjct: 177 RLGI-KRNYITLDPFTFVPAVAQGALAIQGRRKDFNRFAKIIKFLDDFNTRISTDIERRV 235 Query: 237 LAELDGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 L + G C+ + K + + DG I + + D + + + Sbjct: 236 LKLIGGGCQIPFGCYVCPIKNKSFKISAFI-EKDGNIRRVLFEEDFKKDKNEVANEIYKR 294 Query: 296 I 296 + Sbjct: 295 L 295 >gi|269977777|ref|ZP_06184737.1| porphobilinogen deaminase [Mobiluncus mulieris 28-1] gi|269934081|gb|EEZ90655.1| porphobilinogen deaminase [Mobiluncus mulieris 28-1] Length = 360 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 94/346 (27%), Positives = 143/346 (41%), Gaps = 51/346 (14%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++P IGTR S LAL + L + I T+GD +L+ +GG Sbjct: 7 AQRPLVIGTRGSKLALTQTRMVAADLEQR----GLAVRIETFVTEGDTNR-ASLSSLGGV 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F + L+ G D VHS KD+PT + GL ++A R D DV ++ L DL Sbjct: 62 GVFAAALRVALLEGRCDLVVHSLKDLPTVEVPGLVVAAIPARVDPADVLVARDGLRLADL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------------NK 165 + +GT S RR L R D+S++D RG + TR+ ++ Sbjct: 122 PAAARVGTGSPRRARQLAAARPDLSLVDIRGNVPTRIGRVRGLGTRAEQIGLDQGRAKED 181 Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE------LVK 219 A++LA AG++RL E V + L E P+ GQGA+ +ET + A+E ++ Sbjct: 182 LDAVVLARAGLRRLGVEDVATDDL-SETILPAGGQGALALETVADGLAAEEGRILAQTLR 240 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK---------GSTLYFYGIVLASDG 270 +++ E T V+ ERA L L+ C + + L V+ +G Sbjct: 241 IVDDEPTRLEVSAERALLRYLEAGCAAPLGVRGQLTWENNATELLAGVLELRARVVGDNG 300 Query: 271 KIFHEVSRN-----GNRCD--------AINIGRDAAQYIRFISNKN 303 EVS G D A +G D A + Sbjct: 301 -ESVEVSGETTVLLGTDADQRDFALAAAEQLGVDLATELLANGAGE 345 >gi|227876587|ref|ZP_03994697.1| porphobilinogen deaminase [Mobiluncus mulieris ATCC 35243] gi|227842788|gb|EEJ52987.1| porphobilinogen deaminase [Mobiluncus mulieris ATCC 35243] Length = 360 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 94/346 (27%), Positives = 143/346 (41%), Gaps = 51/346 (14%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++P IGTR S LAL + L + I T+GD +L+ +GG Sbjct: 7 AQRPLVIGTRGSKLALTQTRMVAADLEQR----GLAVRIETFVTEGDTNR-ASLSSLGGV 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F + L+ G D VHS KD+PT + GL ++A R D DV ++ L DL Sbjct: 62 GVFAAALRVALLEGRCDLVVHSLKDLPTVEVPGLVVAAIPARVDPADVLVARDGLRLADL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------------NK 165 + +GT S RR L R D+S++D RG + TR+ ++ Sbjct: 122 PAAARVGTGSPRRARQLAAARPDLSLVDIRGNVPTRIGRVRGLGTRAEQIGLDQGRAKED 181 Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE------LVK 219 A++LA AG++RL E V + L E P+ GQGA+ +ET + A+E ++ Sbjct: 182 LDAVVLARAGLRRLGVEDVATDDL-SETILPAGGQGALALETVADGLAAEEGRILAQTLR 240 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK---------GSTLYFYGIVLASDG 270 +++ E T V+ ERA L L+ C + + L V+ +G Sbjct: 241 IVDDEPTRLEVSAERALLRYLEAGCAAPLGVRGQLTWENNATELLAGVLELRARVVGDNG 300 Query: 271 KIFHEVSRN-----GNRCD--------AINIGRDAAQYIRFISNKN 303 EVS G D A +G D A + Sbjct: 301 -ESVEVSGETTVLLGTDADQRDFALAAAEQLGVDLATELLANGAGE 345 >gi|300709477|ref|YP_003735291.1| porphobilinogen deaminase [Halalkalicoccus jeotgali B3] gi|299123160|gb|ADJ13499.1| porphobilinogen deaminase [Halalkalicoccus jeotgali B3] Length = 379 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 89/333 (26%), Positives = 149/333 (44%), Gaps = 60/333 (18%) Query: 1 MEKK--PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M + P R+ TR S LALA A + +L + + ++ + T GDRI + + + Sbjct: 1 MTTRSDPIRLATRGSDLALAQAESVKRALSGRRR----EVELVTVETTGDRIDDELIHRL 56 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G G F +++K+++G+++ A+HS KDMPT+ + L ++A R D ++ + L Sbjct: 57 GKTGAFVHSLDEKVLAGDVEGAIHSMKDMPTEESQ-LVVAAVPERATAGDRLVTPDGKPL 115 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------------- 161 +L + +GT SLRR A LL R D++V RG ++TR+ KL Sbjct: 116 AELPEGATVGTGSLRRGAQLLAQRPDLTVEPLRGNVDTRVEKLLSKSLNEEYDRRVAADE 175 Query: 162 ----------------------------------NNNKAHAILLAYAGIKRLKKE-KVIK 186 + AI+LA AG++R + ++ Sbjct: 176 QRKANTDDDFEPEFDRRPEEWIEGLSERERQAFERSESFDAIVLAAAGLERSGLDREIPT 235 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L E F P+ GQGA+ + T + A+E+ + ++H + ER LA L G C + Sbjct: 236 SDLPTESFVPAAGQGALAV-TMADGDLAREVNEALDHPRSRVETTVERTVLATLGGGCVA 294 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 I A +G + VLA G+ V+R+ Sbjct: 295 PIGIHAVIQGEHVRTRVQVLARGGEPTISVTRD 327 >gi|292654255|ref|YP_003534152.1| porphobilinogen deaminase [Haloferax volcanii DS2] gi|291372938|gb|ADE05165.1| porphobilinogen deaminase [Haloferax volcanii DS2] Length = 363 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 89/357 (24%), Positives = 151/357 (42%), Gaps = 60/357 (16%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+ TR S LA A A + +L ++ ++ + T GDRI + + +G G F Sbjct: 4 TLRLATRGSALARAQAASVQGALAGRR----LDVELVEVETTGDRIQDELIHRLGKTGAF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 ++++++ GE+D AVHS KDMPT+ L ++ R DV ++ + DL Sbjct: 60 VRALDERVLDGEVDAAVHSMKDMPTEKPADLVVAGVPERAPAGDVLVTAEGHDIDDLPEG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------------------- 161 +V+GTSSLRR+A LL +R D+ V RG ++TR+ KL Sbjct: 120 AVVGTSSLRRQAQLLNYRDDLEVEPLRGNVDTRIEKLLATHLQREHEARVENDKERQGKK 179 Query: 162 ----NNNKAH-AILLAYAGIKRLKKEKVIK---------------------------EIL 189 ++ + G+ L+++ + + E L Sbjct: 180 GKTDHDEAFDETADEWFEGLTELERQALGRQVETEYDAIVLAEAGLKRSGLTEKVNYERL 239 Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 F P+PGQGAI + ++ + + ++H T ER LAEL G C + + Sbjct: 240 PRTTFVPAPGQGAIAVTA-ADSVVIELIRDKLDHPRTRVETTVERTILAELGGGCIAPVG 298 Query: 250 GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 A +G ++ VLA+DG + SR+ + N R+ A + + + Sbjct: 299 VHALLQGEHVHVDVQVLATDGSESIKTSRDLPVGNHANAAREFAAALCDRGAGQLVD 355 >gi|307699958|ref|ZP_07637009.1| hydroxymethylbilane synthase [Mobiluncus mulieris FB024-16] gi|307614996|gb|EFN94214.1| hydroxymethylbilane synthase [Mobiluncus mulieris FB024-16] Length = 360 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 94/346 (27%), Positives = 143/346 (41%), Gaps = 51/346 (14%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++P IGTR S LAL + L + I T+GD +L+ +GG Sbjct: 7 AQRPLVIGTRGSKLALTQTRMVAADLEQR----GLAVRIETFVTEGDTNR-ASLSSLGGV 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F + L+ G D VHS KD+PT + GL ++A R D DV ++ L DL Sbjct: 62 GVFAAALRVALLEGRCDLVVHSLKDLPTVEVPGLVVAAIPARVDPADVLVARDGLRLADL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------------NK 165 + +GT S RR L R D+S++D RG + TR+ ++ Sbjct: 122 PAAARVGTGSPRRARQLAAARPDLSLVDIRGNVPTRIGRVRGLGTRAEQIGLDQGRAKED 181 Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE------LVK 219 A++LA AG++RL E V + L E P+ GQGA+ +ET + A+E ++ Sbjct: 182 LDAVVLARAGLRRLGVEDVATDDL-SETILPAGGQGALALETVADGLAAEEGRILAQTLR 240 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK---------GSTLYFYGIVLASDG 270 +++ E T V+ ERA L L+ C + + L V+ +G Sbjct: 241 IVDDEPTRLEVSAERALLRYLEAGCAAPLGVRGQLTWENNATELLAGVLELRARVVGDNG 300 Query: 271 KIFHEVSRN-----GNRCD--------AINIGRDAAQYIRFISNKN 303 EVS G D A +G D A + Sbjct: 301 -ESVEVSGETTVLLGTDADQRDFALAAAEQLGVDLATELLANGAGE 345 >gi|111075012|gb|ABH04865.1| porphobilinogen deaminase [Heliobacillus mobilis] Length = 187 Score = 225 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 76/186 (40%), Positives = 109/186 (58%), Gaps = 3/186 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++P IGTR S LAL + L ++ P + + TKGD+I + L +IG KG Sbjct: 5 QRPVVIGTRDSALALWQTNWVMARLKEL--FPEQAFEVKAIKTKGDKILDVALAKIGDKG 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E ++ GEID AVHS KD+PT L +GL I A RED RD+ IS L L Sbjct: 63 LFTKELEVSMLEGEIDMAVHSLKDLPTVLPEGLTIGAMCVREDCRDILISRHG-GLDALP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GT+SLRRKA + + R D+ ++D RG ++TRL K+ ++LA AG+ RL Sbjct: 122 QGARVGTASLRRKAQIWQVRPDLELLDIRGNLQTRLRKMEEQNLDGLILAAAGVIRLGWA 181 Query: 183 KVIKEI 188 + I + Sbjct: 182 EKISQY 187 >gi|116754430|ref|YP_843548.1| porphobilinogen deaminase [Methanosaeta thermophila PT] gi|116665881|gb|ABK14908.1| hydroxymethylbilane synthase [Methanosaeta thermophila PT] Length = 270 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 84/264 (31%), Positives = 139/264 (52%), Gaps = 3/264 (1%) Query: 42 PLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYL 101 + T GD +R L I G+GLF EI+++++SGEID AVHS KD+P+K + L+I+A + Sbjct: 2 TVRTSGDLFLDRPLHMISGQGLFVREIDERMLSGEIDLAVHSMKDLPSKRPERLRIAAIM 61 Query: 102 PREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 R+ D+ ++ L DL +VIGTSS+RR A L R R D+ V RG ++TRL KL Sbjct: 62 KRDSPCDILLTKDGSGLDDLKSGAVIGTSSMRRAAQLRRARPDLVVRSLRGNLQTRLRKL 121 Query: 162 NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221 + + I++A AG++R+ + ++L+ F PSP QG I + + + L +I Sbjct: 122 HAGEYDGIVIAEAGVQRMGY-HLGYKVLDPGFFVPSPNQGTIAVVSVAG-TEGDALASLI 179 Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281 +H + + ER + + G C +A FA G ++ +L+ DG+ F + Sbjct: 180 DHRPSREETMVERRIMEVVGGGCLVPMAVFARHLGDRIHVTAEILSKDGERFVRLEDTVP 239 Query: 282 RCDAINIGRDAAQYIRFISNKNVF 305 R D + + + + + Sbjct: 240 R-DGLESAERIGRRLLEMGGDELV 262 >gi|313124929|ref|YP_004035193.1| hydroxymethylbilane synthase [Halogeometricum borinquense DSM 11551] gi|312291294|gb|ADQ65754.1| hydroxymethylbilane synthase [Halogeometricum borinquense DSM 11551] Length = 375 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 86/365 (23%), Positives = 152/365 (41%), Gaps = 64/365 (17%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M++ R+ TR S LAL R +L D ++ ++ + T+GD+I + L +G Sbjct: 1 MKRGTLRLATRGSDLALRQTASVRDTLADRR----FDVELVEVETRGDQIRDELLHRLGK 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G F ++++++ E+D AVHS KDMPT+ + L ++ R DV ++ + ++ Sbjct: 57 TGAFVRALDERVLDEEVDAAVHSMKDMPTEHPRDLVVAGVPERAPANDVLLTPDGTAFEN 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL------------------- 161 L SV+GTSSLRRKA +L R D+ V RG ++TR+ KL Sbjct: 117 LPAGSVVGTSSLRRKAQILSARPDLEVEPLRGNVDTRVEKLLAPTLQREHEARVDDDSDK 176 Query: 162 -------------NNNKAHAIL-LAYAGIKRLKKEKVIK--------------------- 186 + + + +++ + + Sbjct: 177 KANSAEASASGEEYETDFDRTIEEWFDDLSEIERRSLERDVETEYDAIVLAEAGLKRSGL 236 Query: 187 ------EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + L +F P+PGQGAI + ++ + ++ T + ER LAEL Sbjct: 237 LHRVEYDRLPPTEFVPAPGQGAIAVTARRDHENLDRIQDALDDPRTRVTTTVERTVLAEL 296 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C + I A +G ++ VL++DG+ SRN + N + A+ + Sbjct: 297 GGGCIAPIGVHAKLQGEHVHVTARVLSTDGEEEVSASRNLPVHNHANAAAEFAESLASQG 356 Query: 301 NKNVF 305 ++ Sbjct: 357 AADLI 361 >gi|284047314|ref|YP_003397654.1| porphobilinogen deaminase [Conexibacter woesei DSM 14684] gi|283951535|gb|ADB54279.1| porphobilinogen deaminase [Conexibacter woesei DSM 14684] Length = 314 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 98/290 (33%), Positives = 142/290 (48%), Gaps = 15/290 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A S L D + +IP++T GDR +G K + Sbjct: 4 LRIGTRASALALVQAEHVASLLRDGGA----QVEVIPITTSGDRGR-----LLGDKSRWV 54 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L++ E+D AVHSAKD+P +L G ++ R D RD A SL+ L + Sbjct: 55 KELEAALLADEVDVAVHSAKDVPAELPDGFVLAGVPARADARDALCG--AASLEQLPDGA 112 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR A L R D+ V+ RG ++TRL KL + +A AI+LA AG++RL + I Sbjct: 113 VVGTSSLRRAAELRALRPDLGVVALRGNVDTRLRKLADGQAAAIVLAVAGLERLDRGAAI 172 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ P+PGQGA+ +ET ++ +A+ I D + ERA + L +C Sbjct: 173 --GAVLDQLVPAPGQGALALETRADDDRARAAAAAITDADAAACLAAERALVRRLGATCH 230 Query: 246 SAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRC-DAINIGRDAA 293 + + A L V DG + + D G A Sbjct: 231 TPLGAHAVRTADGGLRLRSFVGLPDGSAWLRDELSAAAGIDPETFGVAAG 280 >gi|257076597|ref|ZP_05570958.1| porphobilinogen deaminase [Ferroplasma acidarmanus fer1] Length = 285 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 91/265 (34%), Positives = 138/265 (52%), Gaps = 12/265 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P IGTR S LAL A + +L + + I ++ GD N L + G+F Sbjct: 2 PVTIGTRNSKLALIQANSVKDALESR----GYEVNIKSYTSAGDSNKNIPLYRMSSTGVF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ ++++ GEID AVHSAKD+P+ + KGL+I+A R+D RDV IS T L+++ Sbjct: 58 VDELNERVLKGEIDLAVHSAKDIPSNIQKGLEITAVTGRDDFRDVLISRT--PLEEMTAG 115 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SVIGTSS+RR + +I+V D RG I+TR++K K I++A A KR+K + Sbjct: 116 SVIGTSSMRRIRQAMTVNPEITVSDIRGNIDTRISKYTEKKYTGIIIAMAAYKRMKL-DI 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 IL+ E F P+P QG I I N+P + + IN +T+ + ER L+ C Sbjct: 175 EHFILSEEQFLPAPNQGIIAIVGKSNSPASI-ISGEINDRETYRDMKNERFIATSLNLGC 233 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASD 269 + + K + + D Sbjct: 234 SMPVGILS--KDGKIKTR--FYSLD 254 >gi|288920172|ref|ZP_06414488.1| porphobilinogen deaminase [Frankia sp. EUN1f] gi|288348422|gb|EFC82683.1| porphobilinogen deaminase [Frankia sp. EUN1f] Length = 395 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 119/207 (57%), Gaps = 4/207 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 + ++P R+GTR S LALA + +L + ++P+ T GDR +++IGG Sbjct: 19 LTRRPLRLGTRRSALALAQSGHVAEALRARL---GCQVELVPIVTDGDRSQG-AISQIGG 74 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L+SGEID AVHS KD+PT GL ++A PR D RDV +S + + L Sbjct: 75 TGVFVSALREALLSGEIDLAVHSLKDLPTATPDGLVLAAVPPRVDTRDVLVSPSGRGLVK 134 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++ IGT + RR A L V+ RG ++TR+ K + + A++LA+AG+ RL Sbjct: 135 LGPNARIGTGAPRRAAQLRAMGLGFDVVPIRGNVDTRIKKAIDGEVDAVILAHAGLARLD 194 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIET 207 + + EI+ E P+PGQGA+ IE Sbjct: 195 RLDAVTEIIPSEVILPAPGQGALAIEC 221 Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 17/109 (15%) Query: 211 NPKAQELVK-VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC------------KG- 256 + EL++ V++ + +V ERAFLA ++ C + + G Sbjct: 281 DGGLAELLRFVLDDAPSSVAVRAERAFLAGIEAGCTAPVGALGRVLPSTGSSPTTGGDGA 340 Query: 257 ---STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 L +V A DG G+ D +G+ A + + Sbjct: 341 PAVGDLRLRAVVAAPDGSRVLRCELTGSAVDPEALGQRLADEMLSAGAQ 389 >gi|290770684|emb|CAY79080.2| Hem3p [Saccharomyces cerevisiae EC1118] Length = 239 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 63/231 (27%), Positives = 101/231 (43%), Gaps = 11/231 (4%) Query: 87 MPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRS 143 MPT L +G ++ R D D + +SL DL ++GTSS+RR A L R Sbjct: 1 MPTLLPEGFELGGITKRVDPTDCLVMPFYSAYKSLDDLPDGGIVGTSSVRRSAQLKRKYP 60 Query: 144 DISVIDFRGKIETRLNKLNNNK--AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQG 201 + RG I+TRL KL++ K I+LA AG+ R+ E I + + + + GQG Sbjct: 61 HLKFESVRGNIQTRLQKLDDPKSPYQCIILASAGLMRMGLENRITQRFHSDTMYHAVGQG 120 Query: 202 AICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST--L 259 A+ IE + K +++ I + ERA + L+G C I + T L Sbjct: 121 ALGIEIRKGDTKMMKILDEICDLNATICCLSERALMRTLEGGCSVPIGVESKYNEETKKL 180 Query: 260 YFYGIVLASDGKIFHEVS----RNGNRCDAINIGRDAAQYIRFISNKNVFN 306 IV+ +G E + D++ G+ A+ + K + + Sbjct: 181 LLKAIVIDVEGTEAVEDEIEMLIENVKEDSMACGKILAERMIADGAKKILD 231 >gi|213616301|ref|ZP_03372127.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 168 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 69/164 (42%), Positives = 96/164 (58%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P Sbjct: 5 PGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVHSMKDVPVAFPD 64 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL DL S++GTSSLRR+ L R D+ + RG Sbjct: 65 GLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPS 197 + TRL KL+N AI+LA AG+KRL E I+ L + P+ Sbjct: 125 VGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTALPPDVSLPA 168 >gi|182415288|ref|YP_001820354.1| porphobilinogen deaminase [Opitutus terrae PB90-1] gi|177842502|gb|ACB76754.1| porphobilinogen deaminase [Opitutus terrae PB90-1] Length = 284 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 85/262 (32%), Positives = 120/262 (45%), Gaps = 17/262 (6%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K + TR SPLAL + L ++ L T GDR T +L + GGKGL Sbjct: 2 KKLILATRKSPLALRQTEMVAAHLEARL---GVQTELLKLVTTGDRQTEWSLEQKGGKGL 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT E+E L GE D AVHS KD+P + L ++ YLPR D RDV + + Sbjct: 59 FTSELENALRRGEADLAVHSTKDLPGDMAAELAVAGYLPRADARDVLVLRAGVA-----A 113 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLK-- 180 + T S RR+ + + ++ + RG ++TRL K+ A +LA AG+ RL Sbjct: 114 PKSLATGSPRRRLQIAKLYPGVTFTEIRGNVDTRLKKIGELGVADGTVLASAGLNRLGIG 173 Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 V L D P+ GQGAI ++ + + T +V+ ERAF A Sbjct: 174 NWPGVEFHALGFNDMVPAVGQGAIAVQCRAADA---ARFAPVFDAATKRAVDVERAFQAA 230 Query: 240 LDGSCKSAIAGFAYCKGSTLYF 261 L C++A G TL+F Sbjct: 231 LGVGCQTAFGAH--VAGDTLHF 250 >gi|332186913|ref|ZP_08388654.1| porphobilinogen deaminase [Sphingomonas sp. S17] gi|332012923|gb|EGI54987.1| porphobilinogen deaminase [Sphingomonas sp. S17] Length = 210 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 84/193 (43%), Positives = 121/193 (62%), Gaps = 4/193 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 FR+GTR SPLAL A R++L D I I+P+ T GDR+ +R L EIGGK L+T Sbjct: 4 FRLGTRGSPLALTQAHMVRAALADAQGWDEDAIEIVPIKTTGDRVQDRALAEIGGKALWT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+++ L+ GEID +VHS KD+ T L I+A LPR D+RD I A+++ +L + Sbjct: 64 KELDRALLDGEIDASVHSMKDVETIRPDWLHIAAMLPRADVRDRLIG--AETIAELRPGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSS RR+A LL R D+++ RG ++TRL KL + + A LLA AG+ RL +E + Sbjct: 122 VVGTSSPRRRAQLLSHRPDLTITLLRGNVDTRLAKLASGEMDATLLAAAGLDRLGRE--V 179 Query: 186 KEILNIEDFPPSP 198 + + P+P Sbjct: 180 GHAVPTDQMLPAP 192 >gi|167535436|ref|XP_001749392.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772258|gb|EDQ85913.1| predicted protein [Monosiga brevicollis MX1] Length = 643 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 108/212 (50%), Gaps = 8/212 (3%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E RIGTR S LA+ L H P ++PLST GD L + Sbjct: 413 ESPHIRIGTRSSVLAMWQTRWVVERLTRAH--PGVRFSVVPLSTVGDANLTLDLNKFSTT 470 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----QS 117 G+FT+ + + L++ E+D VHS KD+P+ + G Q++A PRED RDV + H + Sbjct: 471 GIFTDALVRALLAQEVDILVHSLKDLPSTISPGTQLAAIGPREDPRDVVVFHHRHSEIKD 530 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAG 175 L L +V+GTSS RR+A L + RG + TRL KL++ N A+ LA AG Sbjct: 531 LAQLPAGAVVGTSSTRRRAQLAAAYPQLRFAPVRGNVMTRLRKLDDPANGYDALCLAAAG 590 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIET 207 + RL E I + L + + GQGA+ I+ Sbjct: 591 LIRLGLEARIGQFLPLTVSRHAIGQGALGIQV 622 >gi|257052010|ref|YP_003129843.1| porphobilinogen deaminase [Halorhabdus utahensis DSM 12940] gi|256690773|gb|ACV11110.1| porphobilinogen deaminase [Halorhabdus utahensis DSM 12940] Length = 373 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 90/367 (24%), Positives = 141/367 (38%), Gaps = 66/367 (17%) Query: 1 MEKK--PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M + FR+ TR S LAL R +L H + ++ + T GD + + + + Sbjct: 1 MSSRATTFRLATRGSDLALRQTGAIRDALESRR----HEVELLEVETTGDELRDELIHRL 56 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G G F +++++ +GE D AVHS KD+PT+ +GL ++A R DV ++ L Sbjct: 57 GKTGAFVHSLDERVRAGEADAAVHSLKDVPTEDREGLTVAAVPERAPANDVLVTPDGTDL 116 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLA------ 172 DL + +GTSSLRR+A LL R D+ V RG ++TR+ KL A A Sbjct: 117 DDLPEGATVGTSSLRRRAQLLAERPDLDVQPLRGNVDTRVEKLLAPTLKAEYTARLDAQE 176 Query: 173 --------------------------YAGIKRLKKEKVIKEIL----------------- 189 + G+ ++++ +E+ Sbjct: 177 SEETTENGDDETKATGQTFEQSFDDWFNGLAEIERKATAREVDTEYDAIVLAEAGLDRLG 236 Query: 190 ----------NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E F PSPGQG A+ + +I+ T ER L Sbjct: 237 LTHHLDFQALPDEQFVPSPGQGV-VAVVAEEGEAAEAIRDIIDDARTRVEATVERTILET 295 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L G C + I A +G + VLA DG R D ++ R+ + + Sbjct: 296 LGGGCVAPIGVRAVFQGRVVTTTVRVLAPDGTEEIADRRALPVEDHVDAARELGEDLADR 355 Query: 300 SNKNVFN 306 V Sbjct: 356 GADEVIE 362 >gi|313896614|ref|ZP_07830163.1| hydroxymethylbilane synthase [Selenomonas sp. oral taxon 137 str. F0430] gi|312974799|gb|EFR40265.1| hydroxymethylbilane synthase [Selenomonas sp. oral taxon 137 str. F0430] Length = 190 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 71/164 (43%), Positives = 101/164 (61%), Gaps = 2/164 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M IGTR S LAL A L H P +V+ ++TKGD+I + L +IGG Sbjct: 1 MNSGTITIGTRASKLALWQAKFVAGELQKRH--PSVTVVLKKMTTKGDKILDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ +++G+ID AVHS KDMP ++ GL I A R D D F+S+ ++++ Sbjct: 59 KGLFTKELEQAMLAGDIDIAVHSLKDMPIEIPAGLIIGAITARLDPGDAFVSNQYAAIEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN 164 L + +GTSSLRR+A LL R D+ ++D RG + TRL KL+ Sbjct: 119 LPAGARVGTSSLRRRAQLLAVRPDLVLLDLRGNVNTRLEKLDAG 162 >gi|217073904|gb|ACJ85312.1| unknown [Medicago truncatula] Length = 243 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 85/183 (46%), Positives = 115/183 (62%), Gaps = 4/183 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKG 62 RIGTR SPLALA A ETR L+ H I I+ + T GD+I ++ L +IGGKG Sbjct: 61 IIRIGTRGSPLALAQAHETRDKLIASHTELAEEGAIQIVIIKTTGDKILSQPLADIGGKG 120 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+EI++ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A SL DL Sbjct: 121 LFTKEIDEALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSAASLADLP 180 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SVIGT+SLRRK+ +L +SV D FRG ++T L + + L+ + +RL Sbjct: 181 AGSVIGTASLRRKSQILHRYPSLSVQDNFRGNVQTSLE-TSGGGCQSYLIGSSWTERLNM 239 Query: 182 EKV 184 ++ Sbjct: 240 TEM 242 >gi|156101752|ref|XP_001616569.1| porphobilinogen deaminase [Plasmodium vivax SaI-1] gi|148805443|gb|EDL46842.1| porphobilinogen deaminase, putative [Plasmodium vivax] Length = 341 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 88/329 (26%), Positives = 147/329 (44%), Gaps = 69/329 (20%) Query: 47 GDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI 106 GD I ++ + GGKG+FT+E++++LI + VHS KD+P +L + +Q+S +L R+ I Sbjct: 2 GDHILDKKVGLFGGKGIFTKELDEQLIKKNVHICVHSLKDVPMELPEHVQLSCFLKRDTI 61 Query: 107 RDVFISHTAQSLKDLALHS---------------------------------------VI 127 D F+S +L+D+ I Sbjct: 62 NDAFLSVKYATLEDMNKRKMANKVEEESDQEKGTIQQMTNQGLKRDNCEGDKCTNFIPTI 121 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR + + +++V + RG I TR+ KL N + AI++A G++RL +KV++ Sbjct: 122 GTSSLRRSSQIKYTYKNVAVKNVRGNINTRIAKLCNGQYDAIIIAKCGLERLLTKKVVRN 181 Query: 188 IL------NIEDFP------------------------PSPGQGAICIETHVNNPKAQEL 217 I+ E F P+ QG I + +H N+ + Sbjct: 182 IIRGKGKVPPEKFLLNHNDMETNLRLLRIQQINRRTIYPALCQGIIAVTSHKNDVDTSNI 241 Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277 +K IN E N ER+FL +++G+C I G+A G + F ++ + G+ + V Sbjct: 242 LKNINDEKAQIMANVERSFLYQIEGNCMMPIGGYAQIVGGEIVFNAVINDTHGREKYHVR 301 Query: 278 RNGNRCDAINIGRDAAQYIRFISNKNVFN 306 G + NI AA ++ + FN Sbjct: 302 EVGTVQNCNNIAAMAATKMKEKIGTHRFN 330 >gi|294653592|ref|NP_714555.2| porphobilinogen deaminase [Leptospira interrogans serovar Lai str. 56601] gi|293630693|gb|AAN51570.2| porphobilinogen deaminase [Leptospira interrogans serovar Lai str. 56601] Length = 542 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 75/313 (23%), Positives = 124/313 (39%), Gaps = 40/313 (12%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +IG+R S LA + +L K P + + GD+ L ++G Sbjct: 1 MS-RILKIGSRKSALAKLQTYLVLGALKK--KFPEIQVELFFREASGDQDLQTPLWKMGT 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG+FT+++ L+ ++D +HS KD+ + I L R D RDV + + K Sbjct: 58 KGVFTQDLTADLVEKKVDIVIHSWKDLDLEGHPDTTIIGVLDRADQRDVLLWKKSSLSKY 117 Query: 121 LALHSVIGTSSLRRKALLLRW----------RSDISVIDFRGKIETRLNKLNNNKAHAIL 170 I TSS RR+ L ++ S + + RG I+TR+ K + + ++ Sbjct: 118 SPSVLKIHTSSPRREYNLRKFLSFSLPSRYTNSSLVFLPIRGNIQTRIRKWKESDSDGLV 177 Query: 171 LAYAGIKRL----------------------KKEKVIKEILNIEDFPPSPGQGAICIETH 208 LA A + RL ++ + +I + P +PGQGAI E Sbjct: 178 LAKAALDRLLSEDFFNSDELEYQEIRKFLKDSMDESVYQIFPLSLNPTAPGQGAIAAEVR 237 Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG--FAYCKGSTLYFYGIVL 266 + + ++ ++ + +V ER L G C I G LY G+ Sbjct: 238 TEDNWVLDRIRTLSKSEVVLAVEEERKILKRFGGGCHQKIGVSILQKAYGKILYQRGL-- 295 Query: 267 ASDGKIFHEVSRN 279 SD EV Sbjct: 296 -SDSGEVLEVEEQ 307 >gi|45655592|ref|YP_003401.1| porphobilinogen deaminase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45602563|gb|AAS72038.1| porphobilinogen deaminase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 547 Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 74/311 (23%), Positives = 123/311 (39%), Gaps = 39/311 (12%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +IG+R S LA + +L K P + + GD+ L ++G KG Sbjct: 7 SRILKIGSRKSALAKLQTYLVLGALKK--KFPEIQVELFFREASGDQDLQTPLWKMGTKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT+++ L+ ++D +HS KD+ + I L R D RDV + + K Sbjct: 65 VFTQDLTADLVEKKVDIVIHSWKDLDLEGHPDTTIIGVLDRADQRDVLLWKKSSLSKYSP 124 Query: 123 LHSVIGTSSLRRKALLLRW----------RSDISVIDFRGKIETRLNKLNNNKAHAILLA 172 I TSS RR+ L ++ S + + RG I+TR+ K + + ++LA Sbjct: 125 SVLKIHTSSPRREYNLRKFLSFSLPSRYTNSSLVFLPIRGNIQTRIRKWKESDSDGLVLA 184 Query: 173 YAGIKRL----------------------KKEKVIKEILNIEDFPPSPGQGAICIETHVN 210 A + RL ++ + +I + P +PGQGAI E Sbjct: 185 KAALDRLLSEDFFNSDELEYQEIRKFLKDSMDESVYQIFPLSLNPTAPGQGAIAAEVRTE 244 Query: 211 NPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG--FAYCKGSTLYFYGIVLAS 268 + + ++ ++ + +V ER L G C I G LY G+ S Sbjct: 245 DNWVLDRIRTLSKSEVVLAVEEERKILKRFGGGCHQKIGVSILQKAYGKILYQRGL---S 301 Query: 269 DGKIFHEVSRN 279 D EV Sbjct: 302 DSGEVLEVEEQ 312 >gi|148693634|gb|EDL25581.1| mCG10727, isoform CRA_b [Mus musculus] Length = 208 Score = 208 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 69/218 (31%), Positives = 102/218 (46%), Gaps = 29/218 (13%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + L ++ P II +ST GD+I + L++IG K L Sbjct: 19 RVIRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H K L Sbjct: 77 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTL-- 134 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKKE 182 RG + TRL KL+ + AI+LA AG++R+ + Sbjct: 135 ------------------------ETLRGNLNTRLRKLDELQEFSAIVLAVAGLQRMGWQ 170 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220 + +IL+ E+ + GQ A+ +E + +LV V Sbjct: 171 NRVGQILHPEECMYAVGQVALAVEVRAKDQDILDLVSV 208 >gi|307254893|ref|ZP_07536715.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306862134|gb|EFM94106.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] Length = 174 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 52/167 (31%), Positives = 82/167 (49%) Query: 139 LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSP 198 + + V RG + TRL+KL+N + AI+LA AG+ RL + I+ +++E P+ Sbjct: 1 MAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMPERIRSFISVEQSLPAA 60 Query: 199 GQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST 258 GQGA+ IET V++ + + +NH T V ERA L G C+ I GFA G+ Sbjct: 61 GQGAVGIETRVDDERVLNYLATLNHNPTACCVIAERAMNTRLQGGCQVPIGGFATLNGNE 120 Query: 259 LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + +V A DG S +R +A +G A+ + + Sbjct: 121 ITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQLLAQGADKIL 167 >gi|261884538|ref|ZP_06008577.1| porphobilinogen deaminase [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 174 Score = 208 bits (530), Expect = 9e-52, Method: Composition-based stats. Identities = 75/171 (43%), Positives = 110/171 (64%), Gaps = 1/171 (0%) Query: 35 PHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKG 94 H++ IIP+ TKGD I + L +IGGKGLF++E+E ++ G D AVHS KD+PT G Sbjct: 5 GHSVEIIPMKTKGDVILDTPLAKIGGKGLFSKELETSMLEGSADIAVHSLKDVPTTFPDG 64 Query: 95 LQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKI 154 L+++ RED+RD +S ++L +L + +GT+SLRRK +L R+D+ +I RG + Sbjct: 65 LKLACVCSREDVRDAMLSMKYKNLDELPQGAKVGTTSLRRKMQILAHRADLDIISLRGNV 124 Query: 155 ETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICI 205 +R+ KL N + AI+LA AGI RL + K K L+I P+ GQGA+ I Sbjct: 125 NSRIAKLKNGEFDAIILAMAGINRLNRSKDDKATLSINT-IPAMGQGALGI 174 >gi|116329566|ref|YP_799285.1| bifunctional porphobilinogen deaminase/uroporphyrinogen synthase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116122459|gb|ABJ80352.1| Bifunctional porphobilinogen deaminase/uroporphyrinogen synthase [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 542 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 79/313 (25%), Positives = 128/313 (40%), Gaps = 40/313 (12%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +I +R S LA + +L K P I + GD L ++G Sbjct: 1 MS-RVLKIASRKSALAKLQTYLVLDALKK--KFPNIQIELHFREASGDLDLQTPLWKMGT 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 +G+FT+++ K L+ ++D +HS KD+ + G I L R D RDV + + K+ Sbjct: 58 RGVFTQDLTKDLVEKKVDLVIHSWKDLDLEGHSGTTIVGVLDRADQRDVLLWKKSSLSKN 117 Query: 121 LALHSVIGTSSLRRKALLLRW----------RSDISVIDFRGKIETRLNKLNNNKAHAIL 170 I TSS RR+ L ++ S + + RG I+TR+ K N+ + ++ Sbjct: 118 FPSELKIQTSSPRREYNLKKFLNNSLPSRYKNSSLIFLPVRGNIQTRIRKWRNSDSDGLV 177 Query: 171 LAYAGIKRL----------------------KKEKVIKEILNIEDFPPSPGQGAICIETH 208 LA A + RL E+ I ++L + P +P QGAI E Sbjct: 178 LAKAALDRLLSEDFLNSNELEYQEIRKFLKEILEESIFQVLPLSLSPSAPAQGAIAAEVR 237 Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK--GSTLYFYGIVL 266 ++ A V+ ++ + +V ER L G C I K G LY G+ Sbjct: 238 TDDEWALGFVRALSKPEVVSAVEEERNTLKRFGGGCHQKIGVSVLYKSYGKILYQKGL-- 295 Query: 267 ASDGKIFHEVSRN 279 +D E+ Sbjct: 296 -TDSGEILEIEEQ 307 >gi|116332455|ref|YP_802172.1| bifunctional porphobilinogen deaminase/uroporphyrinogen synthase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116127322|gb|ABJ77414.1| Bifunctional porphobilinogen deaminase/uroporphyrinogen synthase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 542 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 79/313 (25%), Positives = 128/313 (40%), Gaps = 40/313 (12%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +I +R S LA + +L K P I + GD L ++G Sbjct: 1 MS-RVLKIASRKSALAKLQTYLVLDALKK--KFPNIQIELHFREASGDLDLQTPLWKMGT 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 +G+FT+++ K L+ ++D +HS KD+ + G I L R D RDV + + K+ Sbjct: 58 RGVFTQDLTKDLVEKKVDLVIHSWKDLDLEGHSGTTIVGVLDRADQRDVLLWKKSSLSKN 117 Query: 121 LALHSVIGTSSLRRKALLLRW----------RSDISVIDFRGKIETRLNKLNNNKAHAIL 170 I TSS RR+ L ++ S + + RG I+TR+ K N+ + ++ Sbjct: 118 FPSELKIQTSSPRREYNLKKFLNNSLPSRYKNSSLIFLPVRGNIQTRIRKWGNSDSDGLV 177 Query: 171 LAYAGIKRL----------------------KKEKVIKEILNIEDFPPSPGQGAICIETH 208 LA A + RL E+ I ++L + P +P QGAI E Sbjct: 178 LAKAALDRLLSEDFLNSNELEYQEIRKFLKEILEESIFQVLPLSLSPSAPAQGAIAAEVR 237 Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK--GSTLYFYGIVL 266 ++ A V+ ++ + +V ER L G C I K G LY G+ Sbjct: 238 TDDEWALSFVRALSKPEVVSAVEEERNTLKRFGGGCHQKIGVSVLYKSYGKILYQKGL-- 295 Query: 267 ASDGKIFHEVSRN 279 +D E+ Sbjct: 296 -TDSGEILEIEEQ 307 >gi|19849545|gb|AAL12221.1| porphobilinogen deaminase [Triticum aestivum] Length = 198 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 77/156 (49%), Positives = 104/156 (66%), Gaps = 2/156 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A +TR L H + I II + T GD I ++ L +IGGKGL Sbjct: 43 IRIGTRGSPLALAQARQTRDELKAAHTELAEDGAIEIIIIKTTGDMILDKPLADIGGKGL 102 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G ID AVHS KD+PT L +G+ + LPRED+RD FI TA++L +L Sbjct: 103 FTKEIDDALLEGSIDIAVHSMKDVPTYLPEGMILPCNLPREDVRDAFICLTAKTLGELPA 162 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159 SVIG++SLRR++ +L + V++FRG ++TRL Sbjct: 163 GSVIGSASLRRQSQILYKYPSLKVVNFRGNVQTRLR 198 >gi|56752693|gb|AAW24560.1| SJCHGC02909 protein [Schistosoma japonicum] Length = 268 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 72/221 (32%), Positives = 109/221 (49%), Gaps = 21/221 (9%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + R+G+R S LAL S L P ++ ++T GD I + L++IG K Sbjct: 6 SQHAVRVGSRRSNLALLQTEMAISLLKVQK--PHIMFEVVEIATVGDEILDVPLSKIGDK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSL 118 LFT+E+EK L+ GE+D VHS KD+P+ L GL + R DV + + L Sbjct: 64 SLFTKELEKSLLVGEVDLVVHSLKDVPSVLPTGLVLGCVFGRSSPEDVVLMAPHNRGMKL 123 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-------------- 164 DL + + +GTSS+RR A L+R + I RG + TRL KL+ Sbjct: 124 SDLPVGATVGTSSIRRVATLIRKYPHLKFISIRGNLNTRLAKLDTPSNLQKQCCTGNQSL 183 Query: 165 KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICI 205 A++LA AG++R+ I ++L+ D + QGA+ Sbjct: 184 SYDALILAKAGVERMGWVDRIDQVLS--DSFYAVSQGALAA 222 >gi|147899551|ref|NP_001088263.1| hydroxymethylbilane synthase [Xenopus laevis] gi|54038668|gb|AAH84265.1| LOC495094 protein [Xenopus laevis] Length = 256 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 62/233 (26%), Positives = 92/233 (39%), Gaps = 30/233 (12%) Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 + + +L L SVIGTSSLRR A L + + D RG + TRL KL+ Sbjct: 14 HMMPWCFTLKKSGNTLSTLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRLKKLD 73 Query: 163 NNK-AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221 + AI+LA AG++R+ E I +IL ++ + GQGA+ +E + +V + Sbjct: 74 EQEDFSAIVLAAAGLRRMGWENRIGQILTSDECLYAVGQGALAVEVRTKDQDILSMVSAL 133 Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK---------- 271 +T ERAF+ L+G C +A K LY G V + DG Sbjct: 134 QDPETVLRCVAERAFMKRLEGGCSVPVAVSTVVKDLQLYLTGAVYSLDGSDSLKETMQSC 193 Query: 272 -IFHEVSRNGNRCD------------------AINIGRDAAQYIRFISNKNVF 305 F + G D A +G A + K + Sbjct: 194 VNFLQQEVEGPNDDVQHVGITALGVSQQALESAQCLGTGLADLLLSKGAKEIL 246 >gi|58699795|ref|ZP_00374427.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila ananassae] gi|58533687|gb|EAL58054.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila ananassae] Length = 199 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 69/202 (34%), Positives = 107/202 (52%), Gaps = 6/202 (2%) Query: 99 AYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRL 158 L R D FISH SL+ L + I TS++RRK LL +R D++++ RG + TR Sbjct: 1 CVLERLSPCDAFISHKHNSLESLPQQATIATSAIRRKVQLLNFRPDLNIVPLRGNVTTR- 59 Query: 159 NKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV 218 L N I+LA AG+ RL+K +I E+L + + GQGAICI+ N+ K +L+ Sbjct: 60 --LQNQSFDGIILAEAGLIRLEKHHLITEVLPPKVMLSAVGQGAICIQCRRNDVKIIDLL 117 Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVS 277 + IN+ ++ V ER+F+ ++GSC + +A A + LY ++ DGK + Sbjct: 118 EKINNNMSFIGVKSERSFMKTVNGSCFTPLAALAEYVSENMLYLRCMLA--DGKNIYFTE 175 Query: 278 RNGNRCDAINIGRDAAQYIRFI 299 R DA +G DA ++ Sbjct: 176 RTSFIEDAEKMGMDAGLELKSK 197 >gi|3172397|gb|AAC18581.1| porphobilinogen deaminase [Brevibacillus brevis] Length = 151 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 64/149 (42%), Positives = 88/149 (59%), Gaps = 2/149 (1%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 ++GTR S LAL L P + + + TKGDRI + TL+++GGKGLF + Sbjct: 5 KVGTRRSKLALTQTNWVVDKLK--GFAPEADFELHEIVTKGDRILDVTLSKVGGKGLFVK 62 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE+ L E D AVHS KDMP +L +GL I A R D RDV +S ++L +L ++ Sbjct: 63 EIEQSLFDKETDFAVHSLKDMPAELPEGLVIGAIPKRVDPRDVLLSKDGKTLDELPQGAL 122 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIE 155 +GTS+LRR A +L R DI + RG I+ Sbjct: 123 VGTSTLRRSAQILAHRPDIQIESLRGNID 151 >gi|253787595|dbj|BAH84857.1| putative porphobilinogen deaminase [Cucumis sativus] Length = 188 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 86/187 (45%), Positives = 119/187 (63%), Gaps = 1/187 (0%) Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EI+ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A S +L S+ Sbjct: 1 EIDDALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSAGSFAELPAGSI 60 Query: 127 IGTSSLRRKALLLRWRSDISVID-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGT+SLRRK+ LL + V++ FRG ++TRL KLN A LLA AG++RL + + Sbjct: 61 IGTASLRRKSQLLNRYPSLKVLENFRGNVQTRLRKLNEGVVQATLLALAGLRRLNMTENV 120 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 IL+I++ P+ QGAI I ++ + +NHE+T +V CERAFL LDGSC+ Sbjct: 121 TSILSIDEMLPAVAQGAIGIACRSDDDIMANYLASLNHEETRLAVVCERAFLETLDGSCR 180 Query: 246 SAIAGFA 252 + IAG Sbjct: 181 TPIAGIT 187 >gi|183220566|ref|YP_001838562.1| porphobilinogen deaminase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910676|ref|YP_001962231.1| bifunctional porphobilinogen deaminase/uroporphyrinogen synthase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775352|gb|ABZ93653.1| Bifunctional porphobilinogen deaminase/uroporphyrinogen synthase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778988|gb|ABZ97286.1| Porphobilinogen deaminase (PBG; Hydroxymethylbilane synthase) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 511 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 82/317 (25%), Positives = 137/317 (43%), Gaps = 40/317 (12%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +IG R S L+ ++L + +K N I + GD+ L + GG Sbjct: 1 MSE-TIKIGGRSSLLSRIQIHTVTNALKEKNK--DLNFETIFRESSGDKDLTTPLWQFGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 +G+FT+++++ L++ ++D +HS KDM K K + LPRED+RDV + + + + Sbjct: 58 QGIFTKDLQEDLLNHKVDIVIHSYKDMDLKERKETTLIPVLPREDVRDVLLFKKNKWI-N 116 Query: 121 LALHSVIGTSSLRRKA----LLLRWRS------DISVIDFRGKIETRLNKLNNNKAHAIL 170 L I TSS RR+ L + +I + RG I+TRL K ++++ IL Sbjct: 117 LPNEITILTSSPRREYHIKEFLRNYFPTPINNFEIKIESVRGNIQTRLRKYLDHESGGIL 176 Query: 171 LAYAGIKR-LKKEKVI---------------------KEILNIEDFPPSPGQGAICIETH 208 +A A + R L + +L FP +P QGA+C E Sbjct: 177 VAKAALDRILNFQDPDQLLPELKEIQQLIKDTMNVSLFMVLPSSIFPSAPAQGALCAEIR 236 Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK--GSTLYFYGIVL 266 + + L+ I+ +T + N ER L+ G C I + G + GI Sbjct: 237 KEDKHLETLLSKISDSETNLTTNEEREILSRYGGGCHQKIGVTVLHREYGKVCFIRGI-- 294 Query: 267 ASDGKIFHEVSRNGNRC 283 DG+I + + Sbjct: 295 TEDGQILQTKELSESPN 311 >gi|322694171|gb|EFY86008.1| porphobilinogen deaminase Hem3, putative [Metarhizium acridum CQMa 102] Length = 654 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 67/263 (25%), Positives = 112/263 (42%), Gaps = 33/263 (12%) Query: 63 LFTE-----EIEKKLISGEIDC-AVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-- 114 L+T+ E+KL SG+ V S D+P R+D RD + Sbjct: 87 LWTKKPMDSRAEEKLTSGQWTLSCVVSKTDIPL-------------RDDPRDALVVKAGL 133 Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILL 171 SL+ L +V+GTSS+R A L R + + RG ++TRL K+ + ++ +++ Sbjct: 134 AYTSLQTLPPGAVVGTSSVRHSAQLRRLYPHLRFSNLRGNVDTRLAKVEDPESEYTCMIM 193 Query: 172 AYAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 + AG++R+ + I + L +D + GQGA+ +E + K + V + + + Sbjct: 194 SAAGLERVGLKSRISQYLGSKDGGILHAVGQGALGLEIRKGDSKTLQFVNQLGDRKSTLA 253 Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKG----STLYFYGIVLASDGKIFHEVSRNG---NR 282 ERA L L+G C I G L IV++ DG E S + Sbjct: 254 SLAERALLRALEGGCSVPIGVETEWIGQSEHQVLRMKAIVVSLDGTECVERSIDAMLLTN 313 Query: 283 CDAINIGRDAAQYIRFISNKNVF 305 A +GRD A + + + Sbjct: 314 DQASQLGRDLAARLIDGGAEKIL 336 >gi|4884830|gb|AAD31824.1|AF131199_3 porphobilinogen deaminase [Pseudomonas syringae pv. syringae FF5] Length = 144 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 61/146 (41%), Positives = 87/146 (59%), Gaps = 2/146 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDIS 146 L S++GTSSLRR+A LL R D+ Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQ 144 >gi|330945695|gb|EGH47153.1| porphobilinogen deaminase [Pseudomonas syringae pv. pisi str. 1704B] Length = 191 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 60/142 (42%), Positives = 85/142 (59%), Gaps = 2/142 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWR 142 L S++GTSSLRR+A LL R Sbjct: 119 LPAGSIVGTSSLRRQAQLLARR 140 >gi|297180547|gb|ADI16759.1| porphobilinogen deaminase [uncultured gamma proteobacterium HF0010_11B23] Length = 292 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 80/252 (31%), Positives = 125/252 (49%), Gaps = 10/252 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LAL D++K N I T+GDR + + K F Sbjct: 1 MRIATRSSKLALKQ----VDIFKDLYKTQEINFEIKTQITEGDRKSKKGENLF-DKAHFV 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E++E L++ + D A+HS KDM +GL+I A + + DV + +L DL + Sbjct: 56 EDLESSLLNYDADIAIHSLKDMSCHDTEGLEIYAAIEHQSRSDVMVYKDQINLNDL-ANI 114 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSSLRR + + + + RG I+TRL KL+ +K AI+LA AGI+RL Sbjct: 115 KIGTSSLRRTRQCKHFLKNNNCSEIRGNIDTRLLKLHEDKFDAIILAKAGIERLGLNVNF 174 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ DF P+ GQG I ++ ++ K + L+ I + + + ER + L+ +C Sbjct: 175 IDL----DFLPAIGQGIIAVQCRSDDKKTKTLLDQIKNFELLQMIEIERRIVRNLNATCN 230 Query: 246 SAIAGFAYCKGS 257 SA++ + G Sbjct: 231 SALSIRSKIDGD 242 >gi|168705543|ref|ZP_02737820.1| porphobilinogen deaminase [Gemmata obscuriglobus UQM 2246] Length = 140 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 62/142 (43%), Positives = 88/142 (61%), Gaps = 2/142 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGPKVSLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL + Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTFASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWR 142 L L S++GTSSLRR+A LL R Sbjct: 119 LPLGSIVGTSSLRRQAQLLTRR 140 >gi|226294065|gb|EEH49485.1| porphobilinogen deaminase [Paracoccidioides brasiliensis Pb18] Length = 249 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 17/233 (7%) Query: 92 LKGLQISAYLPREDIRDVFISHTAQ---SLKDLALHSVIGTSSLRRKALLLRWRSDISVI 148 + A +PRED RDV + +L +L SV+GTSS+RR A L R + Sbjct: 7 PNPCALGAVVPREDPRDVLVIKKGLPKMTLAELPAGSVVGTSSVRRIAQLSRHYPHLKPQ 66 Query: 149 DFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIED--FPPSPGQGAIC 204 D RG IETRL KL+ + I+LA AG+ R + I L+ ++ + GQGA+ Sbjct: 67 DIRGNIETRLAKLDAEDGPFTCIILAAAGLLRTGQGARISHFLDSKNGKMLHAVGQGALG 126 Query: 205 IETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST------ 258 +E ++ + + +++ I + ER+ L L+G C + + Sbjct: 127 VEIRADDERMRAMIEKIGDRRATFACLAERSLLRTLEGGCSAPLGVETEWVKGEGQGEVE 186 Query: 259 -LYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNKNVFNF 307 L IV + DGK EV + +A G+ A+ + + Sbjct: 187 KLRLRAIVASVDGKEAVEVEMEAEIRSEAEAEWFGKTVAEELIVKGAGKILEV 239 >gi|25010019|gb|AAN71175.1| GH12864p [Drosophila melanogaster] Length = 558 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 64/223 (28%), Positives = 100/223 (44%), Gaps = 19/223 (8%) Query: 95 LQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFR 151 + I A L RED RD + ++ L SVIGTSSLRR A + R ++V D R Sbjct: 1 MAIGAVLEREDARDALVLRENFKGHTIASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIR 60 Query: 152 GKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209 G + TRL KL+ ++K I+LA AG+ R+ I ++L D + GQGA+ +E Sbjct: 61 GNLNTRLAKLDAADSKFSGIILAQAGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRA 120 Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGS---------TLY 260 N+ + +++ + +T + ER+FL L G C + +A ++ KG L Sbjct: 121 NDDQVLAMLQKLMCLNTTCRILAERSFLKTLGGGCSAPVAVWSNLKGEPLNGNSQEVGLS 180 Query: 261 FYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 G V + DG I + + R + Sbjct: 181 LTGAVWSLDGAIEIRNHLACALNE-----QKLEGDQRKRGAQE 218 >gi|225016972|ref|ZP_03706164.1| hypothetical protein CLOSTMETH_00887 [Clostridium methylpentosum DSM 5476] gi|224950286|gb|EEG31495.1| hypothetical protein CLOSTMETH_00887 [Clostridium methylpentosum DSM 5476] Length = 292 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 78/301 (25%), Positives = 126/301 (41%), Gaps = 26/301 (8%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKG-DRITNRTLTEIG 59 MEK IG + L+ A L H P ++P+ G D Sbjct: 12 MEK--IHIGCAQNELSRNFADHLAQCLHSYH--PELTAELVPIKNTGADEEPT------- 60 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 L +E+ LI +D AV+ A D+P +L L I A RED+RD + + Sbjct: 61 ---LVARRLEQALIDCRVDLAVYHALDLPLELHPELPIVAISSREDVRDALVFPQGKQQP 117 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 D IG +S R++ L R D G + +L +L+ + A++L A + Sbjct: 118 DF--SKPIGCTSRRQQVQLHRVFPDCITAPVGGTVAEQLARLDQGEYGALVLPAAQLGWF 175 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 ++ + ++ +E+ P+ G AI ++ L++ + D+WD+V CER F Sbjct: 176 GLQQRVGQLFCVEELVPAAGHAAIAVQAREEFD--AGLLECFHSWDSWDAVFCEREFARA 233 Query: 240 LD---GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L+ G IA A KG TL G I+ S +G+R DA +G + A + Sbjct: 234 LEEEPG----PIAVHAEVKGETLSVVGFYADEAEGIYRMSSMSGDRKDAGRLGFELAAEL 289 Query: 297 R 297 + Sbjct: 290 K 290 >gi|29841142|gb|AAP06155.1| similar to GenBank Accession Number P19356 hydroxymethylbilane synthase (hemC) in Rattus sp [Schistosoma japonicum] Length = 277 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 100/203 (49%), Gaps = 19/203 (9%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + R+G+R S LAL S L P ++ ++T GD I + L++IG K Sbjct: 6 SQHAVRVGSRRSNLALLQTEMAISLLKVQK--PHIMFEVVEIATVGDEILDVPLSKIGDK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSL 118 LFT+E+EK L+ GE+D VHS KD+P+ L GL + R DV + + L Sbjct: 64 SLFTKELEKSLLVGEVDLVVHSLKDVPSVLPTGLVLGCVFGRSSPEDVVLMAPHNRGMKL 123 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-------------- 164 DL + + +GTSS+RR A L+R + I RG + TRL KL+ Sbjct: 124 SDLPVGATVGTSSIRRVATLIRKYPHLKFISIRGNLNTRLAKLDTPSNLQKQCCTGNQSL 183 Query: 165 KAHAILLAYAGIKRLKKEKVIKE 187 A++LA AG++R+ I + Sbjct: 184 SYDALILAKAGVERMGWVDRIDQ 206 >gi|167835847|ref|ZP_02462730.1| porphobilinogen deaminase [Burkholderia thailandensis MSMB43] Length = 159 Score = 194 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 61/149 (40%), Positives = 91/149 (61%), Gaps = 2/149 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGK 153 +V+GTSSLRR+A+L + V RG Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGN 159 >gi|87886445|dbj|BAE79637.1| porphobilinogen deaminase [Danio rerio] Length = 203 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 74/185 (40%), Positives = 99/185 (53%), Gaps = 6/185 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LA L +++ P I+ +ST GD+I + L++IG K Sbjct: 17 SRVIRVGTRKSQLARIQTDSVVEKLKELY--PDVLFEIVAMSTTGDKILDTALSKIGEKS 74 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLK 119 LFT+E+E L E+D VHS KD+PT L G I A L RE+ D + H + L Sbjct: 75 LFTKELENALEKNEVDLVVHSLKDLPTVLPGGFTIGAVLKRENPHDAVVLHPKNKGKRLD 134 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKR 178 L+ SVIGTSSLRR A L + + D RG + TRL KL+ N AI+LA A KR Sbjct: 135 SLSNKSVIGTSSLRRAAQLKKRXXHLEFKDIRGNLNTRLKKLDEXNDFSAIILAAAXXKR 194 Query: 179 LKKEK 183 + E Sbjct: 195 MGWEN 199 >gi|297622583|ref|YP_003704017.1| Hydroxymethylbilane synthase [Truepera radiovictrix DSM 17093] gi|297163763|gb|ADI13474.1| Hydroxymethylbilane synthase [Truepera radiovictrix DSM 17093] Length = 284 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 76/285 (26%), Positives = 126/285 (44%), Gaps = 20/285 (7%) Query: 16 ALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISG 75 ALA A + L + P + I+ RTL GG +E+ L G Sbjct: 14 ALAQARAVLAELSE--GWPDVS------------ISQRTLQSRGG----ADELLHALQGG 55 Query: 76 EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRK 135 I AV S +P L GL ++A R + R ++ A+SL DL + +G +LR + Sbjct: 56 RIHIAVQSLDTLPLTLPDGLSVAAVTKRLEPRSALLARGAKSLGDLPKGAEVGVPTLRDR 115 Query: 136 ALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFP 195 A +L R D+ V F G++E L L+ + A++ A +L + + + +L + P Sbjct: 116 AFVLAARRDLKVRVFTGELEDALALLSAQELGALVWPSAPFIQLGQRERVTTLLEPQQLP 175 Query: 196 PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK 255 P+PGQGA+ + ++ A +L + H ++D ERAF ++ S I FA Sbjct: 176 PAPGQGALALVVRDDDDLASDLAYTLQHRPSFDRACAERAFARQMSSSAHH-IGAFASVT 234 Query: 256 -GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+ G +G + G+ +A +GR+ AQ + Sbjct: 235 ADGELHLLGAAARDEGDWMIQAEVTGDAAEAEELGRELAQDVLEQ 279 >gi|307826231|ref|ZP_07656440.1| Porphobilinogen deaminase [Methylobacter tundripaludum SV96] gi|307732693|gb|EFO03561.1| Porphobilinogen deaminase [Methylobacter tundripaludum SV96] Length = 155 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 51/151 (33%), Positives = 82/151 (54%) Query: 156 TRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215 TRL+KL++ + AI+LA AG+KRL + I + L+ P+ GQGAI IE +++P+ Sbjct: 1 TRLSKLDSGEYDAIILASAGLKRLGMAERITQCLDTSVSLPAIGQGAIGIECRIDDPEIN 60 Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275 E++ ++ +T V ERA A L G C+ IAGFA +G L+ G+V + DG + + Sbjct: 61 EMLSALHDSETGLCVAAERAMNARLSGGCQVPIAGFATMQGEQLFMRGLVGSPDGSVIYR 120 Query: 276 VSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 R + A IG+ A+ + + Sbjct: 121 AERTDSVDSAEAIGKMIAEDLLAQGADEILQ 151 >gi|159483239|ref|XP_001699668.1| porphobilinogen deaminase [Chlamydomonas reinhardtii] gi|158281610|gb|EDP07364.1| porphobilinogen deaminase [Chlamydomonas reinhardtii] Length = 380 Score = 191 bits (487), Expect = 9e-47, Method: Composition-based stats. Identities = 86/328 (26%), Positives = 139/328 (42%), Gaps = 46/328 (14%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLS--TKGDRITNRTLTEIGG 60 ++P I TR S LA + + L+ ++ + + L ++GD +L +G Sbjct: 60 QRPLVIATRPSKLAKEQTRQVQQLLLAAAQLKDEQLQLSTLELASRGDTTQGVSLRSLG- 118 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G FTEE+++ ++SG D +VHS KD P L GL ++A LPR D RDV I+ A SL + Sbjct: 119 SGAFTEELDQAVLSGAADMSVHSLKDCPAALAPGLLLAACLPRADPRDVLIAPEATSLGE 178 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S +GTSS RR A + + V+ RG +++RL ++ + A +LA AG+KRL Sbjct: 179 LVPGSRVGTSSSRRAAQIKHSFPHLQVVQLRGNVDSRLGRIRSRDIGATVLAAAGLKRLG 238 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER------ 234 D + GA+ + ++ L+ I+H T V ER Sbjct: 239 VMN--------SDEGDTTATGAVGVVCRADDEWVVGLLDAISHRGTALEVAAERACLAAL 290 Query: 235 ----------AFLAELDGSCKSA-I--AGFAYCKGS--TLYFYGIVLASDGKIFHEVSR- 278 AF I A T+ +V +GK + Sbjct: 291 LGGGGACQRSAF----------PDIAWACHTRHDPDSNTMDLDCLVADLEGKELFRYTEF 340 Query: 279 ---NGNRCDAINIGRDAAQYIRFISNKN 303 + DA+++G +R ++ Sbjct: 341 YRPVIDEVDAVSLGSLYGSLLRMMAPPG 368 >gi|238488537|ref|XP_002375506.1| porphobilinogen deaminase, putative [Aspergillus flavus NRRL3357] gi|220697894|gb|EED54234.1| porphobilinogen deaminase, putative [Aspergillus flavus NRRL3357] Length = 230 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 16/228 (7%) Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDIS 146 MPT L +++A PR+D RD I L SL A+L R + Sbjct: 1 MPTSLPDSCELAAIPPRDDPRDALIVKAGLPYTSL--------KSLPEGAVLRRLYPHLR 52 Query: 147 VIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIED--FPPSPGQGA 202 + RG +ETRL K++ +++ ++++ AG++R+ E I + L +D + GQGA Sbjct: 53 FANLRGNVETRLAKVDNSDSEYTCMVMSAAGLERVGLEHRISQYLGSKDGGILHAVGQGA 112 Query: 203 ICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-KGSTLYF 261 + +E + K QEL+ + + + + ER+ + L+G C + I L Sbjct: 113 LGLEIRKGDRKMQELLGQLADQRSTLACLAERSLMRTLEGGCSAPIGVETEWISAGALSI 172 Query: 262 YGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISNKNVFN 306 + IV++ DG E + N +A +G++ A + V N Sbjct: 173 HAIVVSLDGTKSVEDTIVSNVKTVEEATALGKELAARLVKAGAGEVLN 220 >gi|307719295|ref|YP_003874827.1| porphyrin biosynthesis protein HemD [Spirochaeta thermophila DSM 6192] gi|306533020|gb|ADN02554.1| porphyrin biosynthesis protein HemD [Spirochaeta thermophila DSM 6192] Length = 672 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 74/236 (31%), Positives = 113/236 (47%), Gaps = 12/236 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLS--TKGDRITNRTLTEIGGK 61 + R+GTR S LALA E + D + P+ +GDR L + G Sbjct: 2 RVLRLGTRGSRLALAQVREWIARWRDASPEAG-EVEWEPMVLHPRGDRDKRTPLHLVEGS 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIR-DVFISHT----AQ 116 FT+ +++ L+ G ID A+HSAKD+P +L +GL ++A P E R DV + H A Sbjct: 61 DFFTDALDEALLEGRIDVALHSAKDLPDELREGLSLAAITPLEGPREDVLVLHPRWASAS 120 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 S+ +L IGTSS RR+ L RSD ++D RG IE RL ++++ + +++A + Sbjct: 121 SVDELPAGLRIGTSSARRREQLSHLRSDWELVDIRGTIEERLARVSSGEIDGVVMAKVAL 180 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 RL E F P P QG + + + + L V++ W V Sbjct: 181 TRLALE----VPHLPLPFVPHPLQGRLAAVVREGDEEVRRLCAVLDDRGRWGRVAI 232 >gi|322782664|gb|EFZ10527.1| hypothetical protein SINV_04722 [Solenopsis invicta] Length = 331 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 61/181 (33%), Positives = 95/181 (52%), Gaps = 5/181 (2%) Query: 103 REDIRDVFISHTA---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159 RED RD + ++L L SVIGTSSLRR A L R + + + RG + TRL Sbjct: 44 REDPRDAVVMSKKFKDKTLSSLPKGSVIGTSSLRRSAQLSRNMPHLKIENIRGNLNTRLK 103 Query: 160 KLNN--NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217 KL++ AI+LA AG+KR+ E I ++L E+ + GQGA+ +E ++ + + L Sbjct: 104 KLDDENGPYAAIILAAAGLKRMGWEDRISQLLEPEEALYAVGQGALGVECRQSDWEIRSL 163 Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277 ++ + +T CER+FL L G C + +A + K + L G V + DG+ + Sbjct: 164 LEPLFDLETTLRCVCERSFLKTLGGGCSAPVAVSSSLKENELTITGAVWSLDGQTLITDT 223 Query: 278 R 278 Sbjct: 224 I 224 >gi|47200553|emb|CAF87716.1| unnamed protein product [Tetraodon nigroviridis] Length = 199 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 97/200 (48%), Gaps = 30/200 (15%) Query: 13 SPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKL 72 S LA L +++ P ++ I+ +ST GD+I + L++IG K LFT+E+E L Sbjct: 1 SQLARIQTDSVAEKLKELY--PDVHLEIVAMSTIGDKILDTALSKIGEKSLFTKELENAL 58 Query: 73 ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDLALHSVIGT 129 E+D VHS KD+PT L G I A L RE+ D + H ++L L HSVIGT Sbjct: 59 ERNEVDLVVHSLKDLPTSLPPGFTIGAVLKRENPHDAVVLHPKNAGKTLDALPAHSVIGT 118 Query: 130 SSLRRKALLLRWRSDISVIDF------------------------RGKIETRLNKLNNNK 165 SSLRR A L + + D RG + TRL KL+ + Sbjct: 119 SSLRRAAQLKKRFPHLDFKDIVSSERCFLPVQPGHRCFFLSSRSQRGNLNTRLKKLDEKE 178 Query: 166 -AHAILLAYAGIKRLKKEKV 184 AI+ A AG++R+ + Sbjct: 179 DFAAIISAAAGLRRMGWDNR 198 >gi|119587852|gb|EAW67448.1| hydroxymethylbilane synthase, isoform CRA_b [Homo sapiens] Length = 171 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 57/150 (38%), Positives = 78/150 (52%), Gaps = 5/150 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA ++L + P II +ST GD+I + L++IG K L Sbjct: 19 RVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 77 FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLET 136 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDF 150 L SV+GTSSLRR A L R + Sbjct: 137 LPEKSVVGTSSLRRAAQLQRKFPHLEFRSI 166 >gi|297620494|ref|YP_003708631.1| Porphobilinogen deaminase/Uroporphyrinogen-III synthase [Waddlia chondrophila WSU 86-1044] gi|297375795|gb|ADI37625.1| Porphobilinogen deaminase/Uroporphyrinogen-III synthase [Waddlia chondrophila WSU 86-1044] Length = 472 Score = 186 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 5/225 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 + + R SPL+ A E P + ++T GDR +L + Sbjct: 54 LSTNRITVAARSSPLSEAQVDEI--LYEAQLIQPTLEFEVTLVTTLGDRDQESSLRTLEK 111 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 FT +I++ L++G AVHSAKD+P + GL I A D D + +L Sbjct: 112 TDFFTRDIDQLLLNGYCRIAVHSAKDLPDPIPNGLNIIAVNQGLDPSDSLVMRPGDTLSS 171 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + I TSS+RR+ + RSD+ V+D RG I RL KLN+ + +++A + + RL Sbjct: 172 LPKGAKIATSSIRREKAVHSLRSDLEVVDIRGNIGQRLQKLNDREVDGVIVAESALIRLN 231 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED 225 + + L E +PGQG + + ++ +A ++ Sbjct: 232 LYHLNRIHLPGET---APGQGKLAVVAREDDEEAAVFFSAMDQRP 273 >gi|209732910|gb|ACI67324.1| Porphobilinogen deaminase [Salmo salar] Length = 174 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 58/151 (38%), Positives = 78/151 (51%), Gaps = 5/151 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LA L ++ P ++ I+ +ST GD+I + L++IG K Sbjct: 17 NRVIRMGTRKSQLARIQTDYVAEKLKTLY--PDVHLEIVAMSTIGDKILDTALSKIGEKS 74 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119 LFT+E+E L E+D VHS KD+PT L G I A L RE D + H +L Sbjct: 75 LFTKELENALERNEVDLVVHSLKDLPTTLPNGFTIGAVLQRESPHDAVVLHPKNSGLTLD 134 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDF 150 L SVIGTSSLRR A L + + D Sbjct: 135 TLPDGSVIGTSSLRRAAQLKKRFPHLEFKDI 165 >gi|42524803|ref|NP_970183.1| hydroxymethylbilane synthase [Bdellovibrio bacteriovorus HD100] gi|39577013|emb|CAE78242.1| hydroxymethylbilane synthase [Bdellovibrio bacteriovorus HD100] Length = 502 Score = 182 bits (463), Expect = 5e-44, Method: Composition-based stats. Identities = 78/316 (24%), Positives = 127/316 (40%), Gaps = 33/316 (10%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI R S LA A+ +L + K P I + GD+ L +I KG+FT Sbjct: 3 LRISARKSDLARLQAYMVGDALKE--KNPQIEIDYRFRESLGDKNLTDPLWKIPEKGVFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124 E+ +L+ E D VHS KD+PT+ I+A LPR D RD+ + + Sbjct: 61 EDFFGELLRDETDLVVHSWKDLPTEHKSETVIAATLPRADQRDLLLVKKSHFDKIKTSKT 120 Query: 125 SVIGTSSLRRKALLLRWRS--------DISVIDFRGKIETRLNKLNNN-KAHAILLAYAG 175 + +SS RR+ L + D+ RG + TR+ KL + + +++A A Sbjct: 121 LKVFSSSPRREYNLTGFFKEHLPFGLQDVKFESVRGNMLTRVRKLIESPETDGLIVAKAA 180 Query: 176 IKRL----------KKE-------KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV 218 RL ++ ++ +L + P + QGA+ +E + Q+L+ Sbjct: 181 FDRLFSATLPEFLEGQQQLRQYFNELNWVVLPLSVNPNAAAQGALAVEVLKSRQDLQDLL 240 Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIA--GFAYCKGSTLYFYGIVLASDGKIFHEV 276 + I+H DT+ ER L+ G C I A G G+ G++ + Sbjct: 241 QSIHHADTFHCSQKERDVLSSFGGGCHQKIGVAVLARPYGQITLLKGL--TDAGQVLDKR 298 Query: 277 SRNGNRCDAINIGRDA 292 N +D Sbjct: 299 ELKLNNPAPQFAAQDL 314 >gi|254380811|ref|ZP_04996177.1| porphobilinogen deaminase 2 [Streptomyces sp. Mg1] gi|194339722|gb|EDX20688.1| porphobilinogen deaminase 2 [Streptomyces sp. Mg1] Length = 231 Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats. Identities = 69/224 (30%), Positives = 111/224 (49%), Gaps = 10/224 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+GTR SP+AL + P + I+ + ++GDR L+ IGGKG F Sbjct: 10 TVRLGTRPSPMALEQTGRFADVFRA--RYPQVVLDIVEIVSEGDRHRG-PLSTIGGKGAF 66 Query: 65 TEEIEKKLISGEIDCAVHSAKDMP--TKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119 T ++ L+ G + + AKD+P G+ I+A LPRED RD + H +L Sbjct: 67 TRNADRYLLDGRVQATIACAKDVPGPHDRSPGIVIAAVLPREDTRDALVLPTGHPVTTLA 126 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGIK 177 +L + +GTS+ RR ALL + + RG ++RL L+ + A ++ A AG++ Sbjct: 127 ELPPGTRVGTSAPRRSALLKALHPTLVQVPIRGNADSRLRALDAGRLGADVMIAALAGLR 186 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221 RL E EIL+ + P+ G G + +E ++P L+ + Sbjct: 187 RLGHEDRASEILDPAVWLPAAGAGTVIVEHRSDDPATGWLLAPL 230 >gi|167718597|ref|ZP_02401833.1| porphobilinogen deaminase [Burkholderia pseudomallei DM98] Length = 142 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 57/132 (43%), Positives = 86/132 (65%), Gaps = 2/132 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L + Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPVG 130 Query: 125 SVIGTSSLRRKA 136 +V+GTSSLRR+A Sbjct: 131 AVVGTSSLRREA 142 >gi|329942690|ref|ZP_08291469.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Chlamydophila psittaci Cal10] gi|332287285|ref|YP_004422186.1| porphobilinogen deaminase [Chlamydophila psittaci 6BC] gi|313847869|emb|CBY16864.1| putative porphobilinogen deaminase [Chlamydophila psittaci RD1] gi|325506761|gb|ADZ18399.1| porphobilinogen deaminase [Chlamydophila psittaci 6BC] gi|328814950|gb|EGF84939.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Chlamydophila psittaci Cal10] gi|328914531|gb|AEB55364.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Chlamydophila psittaci 6BC] Length = 245 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 67/231 (29%), Positives = 98/231 (42%), Gaps = 7/231 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 + ++P RI +R S LA A E L P I I +ST+GD+ L + Sbjct: 16 LGRRPLRIASRKSTLAQAQVHECVRLLRSW--FPKLWIQIHTISTRGDKDKTTPLRLVEN 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 FT+ ++K +I G AVHSAKD+P + A D D+ + K Sbjct: 74 SQFFTDAVDKLVIRGNCHLAVHSAKDLP--DPPATPVVAITKGLDPSDLLVYAERYLWKR 131 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 +G+SSLRR L + ++D RG IE RL +L N K AI++A A I RL Sbjct: 132 FPKVPRLGSSSLRRGETLKTLFPEGRILDIRGTIEERLEQLENGKYDAIVIAKAAILRLH 191 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 ++L P P QG + I + + + +N T Sbjct: 192 LHLPYTKVLPP---PYHPLQGRLAITAGKDIEAWKTFLLPLNTATTSQETL 239 >gi|89898473|ref|YP_515583.1| porphobilinogen deaminase [Chlamydophila felis Fe/C-56] gi|89331845|dbj|BAE81438.1| porphobilinogen deaminase [Chlamydophila felis Fe/C-56] Length = 243 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 66/222 (29%), Positives = 102/222 (45%), Gaps = 7/222 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 + ++P RI +R S LA A +E L P I I ++T+GD+ L I Sbjct: 16 LGRRPLRIASRKSTLAKAQVYECVRLLRSW--FPKLWIQIQTVNTQGDKDKTTPLRLIEN 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 FT+ ++K ++SG AVHSAKD+P I A D D+ + K Sbjct: 74 SQFFTDAVDKLVLSGNSHLAVHSAKDLPN--PPVTTIIAITQGLDPADLLVYGNRYLWKR 131 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +G+SSLRR+ +L + ++ RG IE RL +L + K AI++A A RL Sbjct: 132 FPKNPKLGSSSLRREEILKKLFPAGKILHIRGTIEERLEQLESGKYDAIIVAKAAALRLH 191 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 + E L P P QG + + N ++L+ +N Sbjct: 192 LKLPYTEELPP---PYHPLQGRLSVTAAKNIESWKKLLYPLN 230 >gi|55379657|ref|YP_137507.1| porphobilinogen deaminase [Haloarcula marismortui ATCC 43049] gi|55232382|gb|AAV47801.1| porphobilinogen deaminase [Haloarcula marismortui ATCC 43049] Length = 389 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 77/372 (20%), Positives = 137/372 (36%), Gaps = 73/372 (19%) Query: 1 MEKK--PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M + ++ TR S LAL A R SL + ++ + T GD+I + + + Sbjct: 1 MTTRGETLQLATRGSDLALRQAATVRDSLSSRR----LAVELVEVETTGDQIRDELIHRL 56 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTK---------------------------- 90 G G F +++K++ GE+D AVHS KDMPT+ Sbjct: 57 GKTGAFVRSLDEKVLDGELDAAVHSMKDMPTERPERLVVAAVPERAAAEDVLVTPDGRSL 116 Query: 91 --LLKGLQISAYLPREDIRDVFISHTAQSLKDLALH-----SVIGTSSLRRKALLLR--- 140 L +G + R + + +++ L + + + SL+++ Sbjct: 117 EELPEGATVGTSSLRRKAQ-LLAERDDLTVEPLRGNVDTRLAKLLAPSLQQEHQERHEAE 175 Query: 141 ---------------WRSDISVIDFRGKIETRLNKL-----------NNNKAHAILLAYA 174 + + +E + L + + AI+LA A Sbjct: 176 QEHEGDAGDGDDADPDTDEEEEHPYDRTVEEWFDDLTEFERRAMERDPDVEYDAIVLAKA 235 Query: 175 GIKRLKKEK-VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 G+ R + V L+ + F P+PGQGA+ + V+ A ++ ++ T E Sbjct: 236 GLHRAGLTRYVGMSDLDPDQFVPAPGQGALAVTA-VDGDLALDIKDRLDDPQTRIETTVE 294 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 R L EL G C + I A +G ++ VL+ DG V R+ I +D A Sbjct: 295 RTILEELGGGCVAPIGVHAQLEGGVVHTRVRVLSQDGTEEVSVGRDVPAEYHIESAQDLA 354 Query: 294 QYIRFISNKNVF 305 + ++ Sbjct: 355 AELAEQGADDLI 366 >gi|29840104|ref|NP_829210.1| porphobilinogen deaminase [Chlamydophila caviae GPIC] gi|29834452|gb|AAP05088.1| porphobilinogen deaminase HemC, putative [Chlamydophila caviae GPIC] Length = 242 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 65/220 (29%), Positives = 97/220 (44%), Gaps = 7/220 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++P RI +R S LA A A E L P + I + T GD+ L + Sbjct: 18 RRPLRIASRRSTLAQAQAHECVCLLRSW--FPKLWVQIHTVHTLGDKDKKTPLHLVENSQ 75 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 FT+ ++K ++ G AVHSAKD+P I A D D+ + K Sbjct: 76 FFTDAVDKLVLRGNCHLAVHSAKDLPN--PSKTSIVAITNGLDPSDLLVYGERYLWKRFP 133 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +G+SSLRR +L ++D RG IE RL +L + K AI++A A + RL Sbjct: 134 KNPRLGSSSLRRGEMLKNLFPKGQILDIRGTIEERLKQLESGKYDAIVVAKAAVIRLHLR 193 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 + L P P QG + I N ++L+ +N Sbjct: 194 LPYTKTLPP---PYHPLQGRLSITAAKNIEAWKKLLLPLN 230 >gi|47779350|gb|AAT38579.1| predicted porphobilinogen deaminase [uncultured gamma proteobacterium eBACHOT4E07] Length = 286 Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 82/296 (27%), Positives = 128/296 (43%), Gaps = 18/296 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +I TR S LALA E S + II + T+GD +++ T K F Sbjct: 2 TLKIATRSSKLALAQVDEFVSE------YNISDYKIIKIKTEGDVKSSKGETLF-DKAHF 54 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +I+K ++ G+ D AVHSAKD P K G++ + + R +DV I + Sbjct: 55 VTDIQKSILRGDADIAVHSAKDTPAKKTNGIERNFIISRTS-KDVLIFKDNNNF---NSS 110 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +GTSSLRRK + +V D G ++TRL KL I+LA AG++ + + Sbjct: 111 MKLGTSSLRRKLQAFHFLKSTNVFDINGNVDTRLEKLYRGDYDCIILAKAGLE--RLRLL 168 Query: 185 IKEILNIEDFPPSPGQGAICIETHV---NNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + D+ + GQG + +E N K E+ I ++ + + ER L +D Sbjct: 169 KELNYEEMDWITASGQGTLAVEMTESYHENEKLLEIHSNIKNKLATNGIEYERNILERVD 228 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C SAIA + + S G + K F S + +I R + + Sbjct: 229 AGCNSAIAIESISENSKQIIRGEIYGV--KEFITFSGASDIEAIEDIERQNGRRLL 282 >gi|62184962|ref|YP_219747.1| porphobilinogen deaminase [Chlamydophila abortus S26/3] gi|62148029|emb|CAH63781.1| putative porphobilinogen deaminase [Chlamydophila abortus S26/3] Length = 249 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 64/231 (27%), Positives = 97/231 (41%), Gaps = 7/231 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 + K+P RI +R S LA A E L P I I +ST+GD+ + + Sbjct: 16 LGKRPLRIASRKSILAQAQVHECVRLLRSW--FPKLWIQIHTISTRGDKDKTTPIRLVEN 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 FT+ ++K +I G AVHSAKD+P + A D D+ + + Sbjct: 74 SQFFTDTVDKLVIRGNCHLAVHSAKDLP--DPPATPVVAITKGLDPSDLLVYAERYLWQR 131 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 +G+SS RR L ++D RG IE RL +L N K AI++A A + RL Sbjct: 132 FPKVPRLGSSSSRRGETLKMLFPTGRILDIRGTIEERLEQLENGKYDAIVVAKAAVLRLH 191 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 + ++L P P QG + I + + + +N T Sbjct: 192 LQLPYTKVLPP---PYHPLQGRLAITAGKDIEAWKTFLLPLNTATTNQETL 239 >gi|295670329|ref|XP_002795712.1| porphobilinogen deaminase [Paracoccidioides brasiliensis Pb01] gi|226284797|gb|EEH40363.1| porphobilinogen deaminase [Paracoccidioides brasiliensis Pb01] Length = 216 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 14/205 (6%) Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYA 174 +L +L SV+GTSS+RR A L R + D RG IETRL KL+ + I+LA A Sbjct: 2 TLAELPAGSVVGTSSVRRIAQLSRHYPHLKPQDIRGNIETRLAKLDAEDGPFTCIILAAA 61 Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 G+ R + I L+ ++ + GQGA+ +E ++ + + +++ I + Sbjct: 62 GLLRSGQGARISHFLDSKNGKMLHAVGQGALGVEIRADDERMRAMIEKIGDRRATFACLA 121 Query: 233 ERAFLAELDGSCKSAIAGFAYC-------KGSTLYFYGIVLASDGKIFHEVSRNG---NR 282 ER+ L L+G C + + + L IV + DGK E + Sbjct: 122 ERSLLRALEGGCSAPLGVETEWVKGEGEGEVDKLRLRAIVASVDGKEAVEAEMEAEIRSE 181 Query: 283 CDAINIGRDAAQYIRFISNKNVFNF 307 +A G+ A+ + + Sbjct: 182 VEAEGFGKTVAEELIVKGAGKILEV 206 >gi|294953467|ref|XP_002787778.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983] gi|239902802|gb|EER19574.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983] Length = 553 Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats. Identities = 74/310 (23%), Positives = 122/310 (39%), Gaps = 46/310 (14%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 RIG+R S LA L ++ + + GD L ++ Sbjct: 5 SNATLRIGSRRSDLARLQTLMVADRLEEM----GYEVECEYQEAPGDTNLKDPLWKMPET 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSLK 119 G+FT + +KL+ G +D VHS KD+P G ++A LPR D RD+ I ++ Sbjct: 61 GVFTTFLRQKLLEGSVDLVVHSWKDLPLAEEAGTTVAATLPRADPRDLIIIRKDAEAEIR 120 Query: 120 DLALHSVIGTSSLRRK----ALLLRWRSD---ISVIDFRGKIETRLNKLNN--------- 163 + ++ +SS RR+ A L R + D RG I+TR+ KL + Sbjct: 121 AMNGKLIVLSSSPRRQWNLPAFLQRAVPGVETVEFRDVRGNIQTRMRKLMDPARHNASLG 180 Query: 164 NKAHAILLAYAGIKRLKKEKV-----------------IKEILNIEDFPPSPGQGAICIE 206 + HA++LA A + R + +L + P + QGA+ +E Sbjct: 181 PRPHALVLAKAAVDRFAQSHREEFRNSRELVEGYLSKCHCMVLPLSANPTAAAQGALGVE 240 Query: 207 THVNNPK--AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA--GFAYCKGSTLYFY 262 + K +++V +N E T+ + E+ L G C I G + Sbjct: 241 VSTASEKEHVRKIVSKLNDEQTFQAAWREKEVLGAYGGGCHQRIGCTVLPRWYGKVEHLR 300 Query: 263 GIVLASDGKI 272 G +DG + Sbjct: 301 G---RTDGGV 307 >gi|260890848|ref|ZP_05902111.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Leptotrichia hofstadii F0254] gi|260859401|gb|EEX73901.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Leptotrichia hofstadii F0254] Length = 193 Score = 175 bits (445), Expect = 6e-42, Method: Composition-based stats. Identities = 71/184 (38%), Positives = 97/184 (52%), Gaps = 20/184 (10%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVH----------------KIPPHNIVIIPLS 44 M+ IGTR S LALA A + + L+ + K I + + Sbjct: 1 MKSNKIIIGTRGSILALAQAEKVKEMLIKKYDELRENESFCEIEGFEKKNSLEIELKVIV 60 Query: 45 TKGDRITNRTLTEIGG---KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYL 101 TKGD+ R T+I G K LF +EIEK+++ +ID AVHS KDMP +GL + + Sbjct: 61 TKGDKDL-RDFTKIKGTTQKDLFVKEIEKEMLENKIDLAVHSLKDMPQNTPEGLLNACFP 119 Query: 102 PREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 RED RDV +S + LK+L +SVIGT S+RR+ LL R+D+ + RG I TRL KL Sbjct: 120 MREDNRDVLVSKNGKKLKELDENSVIGTGSIRREKELLNLRNDVKIKAIRGNIHTRLKKL 179 Query: 162 NNNK 165 Sbjct: 180 MMGN 183 >gi|294919063|ref|XP_002778511.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983] gi|239886970|gb|EER10306.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983] Length = 553 Score = 175 bits (444), Expect = 8e-42, Method: Composition-based stats. Identities = 74/310 (23%), Positives = 122/310 (39%), Gaps = 46/310 (14%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 RIG+R S LA L ++ + + GD L ++ Sbjct: 5 SNATLRIGSRRSDLARLQTLMVADRLEEM----GYKVECEYQEAPGDTNLKDPLWKMPET 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSLK 119 G+FT + +KL+ G +D VHS KD+P G ++A LPR D RD+ I ++ Sbjct: 61 GVFTTFLRQKLLDGSVDLVVHSWKDLPLAEEAGTTVAATLPRADPRDLIIIRKDAEAEIR 120 Query: 120 DLALHSVIGTSSLRRK----ALLLRWRSD---ISVIDFRGKIETRLNKLNN--------- 163 + ++ +SS RR+ A L R + D RG I+TR+ KL + Sbjct: 121 AMNGKLIVLSSSPRRQWNLPAFLQRAVPGVETVEFRDVRGNIQTRMRKLMDPARHDASLG 180 Query: 164 NKAHAILLAYAGIKRLKKEKV-----------------IKEILNIEDFPPSPGQGAICIE 206 + HA++LA A + R + +L + P + QGA+ +E Sbjct: 181 PRPHALVLAKAAVDRFAQSHRGEFRNSRELVQGYLSKCHCMVLPLSANPTAAAQGALGVE 240 Query: 207 THVNNPK--AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA--GFAYCKGSTLYFY 262 + K +++V +N E T+ + E+ L G C I G + Sbjct: 241 VSTASEKGHVRKIVSKLNDEQTFQAAWREKEVLGAYGGGCHQRIGCTVLPRWYGKVGHLR 300 Query: 263 GIVLASDGKI 272 G +DG + Sbjct: 301 G---RTDGGV 307 >gi|325526662|gb|EGD04197.1| porphobilinogen deaminase [Burkholderia sp. TJI49] Length = 141 Score = 175 bits (444), Expect = 8e-42, Method: Composition-based stats. Identities = 52/126 (41%), Positives = 78/126 (61%), Gaps = 2/126 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 76 VKELENALADGRADLAVHSLKDVPMALPDGFSLAAIMSREDPRDAFVSNDYASLDALPAG 135 Query: 125 SVIGTS 130 +V+GTS Sbjct: 136 AVVGTS 141 >gi|297180918|gb|ADI17122.1| porphobilinogen deaminase [uncultured gamma proteobacterium HF0070_03O15] Length = 297 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 86/314 (27%), Positives = 131/314 (41%), Gaps = 33/314 (10%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +I TR S LAL + +S + P II + T+GD+ + K F Sbjct: 1 MKIATRSSKLALEQTYFFQSWI------PKQPTKIIEIKTEGDKKSAMGEVLF-DKANFV 53 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +IE+ LI D A+HSAKDMP K L + PR D+ I Sbjct: 54 SDIEECLIKDGADVAIHSAKDMPAFKHKELDHYFFGPR-SRSDLLIFRKDID-PVFKKDM 111 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRRK + +V+ G ++TR+NKLN+ I+LA AG +RLK + Sbjct: 112 KLGTSSLRRKMQAKFYLGAKNVVPISGNVDTRINKLNSGDYDCIILAEAGCQRLKIDFED 171 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELV---------KVINHEDTWDSVNCERAF 236 + + GQG + ++ +N A+E + +VI+ E E+ Sbjct: 172 LNYIELGH-LTCAGQGVLAVQYKRDNKFAKEFLLEWKQNFLQRVIHDE-----TEMEKRL 225 Query: 237 LAELDGSCKSAIAGFAYCKG----STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292 L ++ SC SAIA A +G + G V + +S G D DA Sbjct: 226 LEKIGASCNSAIAVRANHEGPKGVDKI-IKGEVYGLN----EYISFEGKSSDVDTAINDA 280 Query: 293 AQYIRFISNKNVFN 306 ++ + + N Sbjct: 281 IDMLQNKNGLELLN 294 >gi|212550635|ref|YP_002308952.1| hydroxymethylbilane synthase/uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548873|dbj|BAG83541.1| hydroxymethylbilane synthase/uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 682 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 69/227 (30%), Positives = 104/227 (45%), Gaps = 20/227 (8%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K R+ +R SPL+L E P + +I + + GD+ + L +I Sbjct: 7 SKGNLRVISRNSPLSLLQVKEV------FSFFPNIDYQLITIESFGDKNKHVALFDISNV 60 Query: 62 G-----------LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF 110 FT E+++ LI + D AVHSAKD+P L L++ A D D Sbjct: 61 SSFFLEEESISDFFTRELDEALIYNKADIAVHSAKDLPYPLPYDLELFALFQAMDKSDSL 120 Query: 111 ISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAIL 170 IS +L+ L + +GTSS +RK LL+ R D+ V+ RG IE R+ K++N A++ Sbjct: 121 ISRNNLTLEQLPPRARVGTSSQKRKTELLKIRPDLEVVSIRGNIEERIAKMDNGFIDALI 180 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217 +A + RL E I IL E QG + I N+ + L Sbjct: 181 VATCALIRLGMEARIACILPFET---HSLQGNLAIVGRKNDKNVKNL 224 >gi|297170589|gb|ADI21615.1| porphobilinogen deaminase [uncultured myxobacterium HF0130_06F04] Length = 197 Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 8/198 (4%) Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173 L L + +GTSSLRRKA LL R D+ ++D RG + TR NK + + A++LA Sbjct: 2 DDNQLWGLKEKARVGTSSLRRKAHLLSKRPDLVMVDIRGNVPTRFNKAVSGELDAVILAE 61 Query: 174 AGIKRLKK------EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227 AG+ RL+ + V +++ P+P QGA+ I+T ++ +A +K ++H T Sbjct: 62 AGLTRLEMGKQAENQGVRLVPIDVASVCPAPAQGALAIQTRSDDERAHAALKALHHPGTA 121 Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 V ER L E G C + + +V + DG E GN Sbjct: 122 ACVEVERLLLGEFGGGCHLPLGAHCTVENGEYTLVALVASPDGGERFEARSTGN--HPNE 179 Query: 288 IGRDAAQYIRFISNKNVF 305 + + + Sbjct: 180 VAKQVHLELVRQGADAYL 197 >gi|15835189|ref|NP_296948.1| porphobilinogen deaminase [Chlamydia muridarum Nigg] gi|270285361|ref|ZP_06194755.1| porphobilinogen deaminase [Chlamydia muridarum Nigg] gi|270289377|ref|ZP_06195679.1| porphobilinogen deaminase [Chlamydia muridarum Weiss] gi|301336758|ref|ZP_07224960.1| porphobilinogen deaminase [Chlamydia muridarum MopnTet14] gi|11386847|sp|Q9PK95|HEM3_CHLMU RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|7190611|gb|AAF39408.1| porphobilinogen deaminase HemC, putative [Chlamydia muridarum Nigg] Length = 242 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 68/221 (30%), Positives = 103/221 (46%), Gaps = 5/221 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 + K P R+ +R SPLA+ A E L P +I +T+GD + L + Sbjct: 16 LGKIPLRLASRKSPLAVLQAHECLRRLQTF--FPRLWGQVITETTQGDLDQHTPLHSVEN 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G FT++I+ + SG+ D A+HSAKD+P K ++ A D RD+ + L+ Sbjct: 74 TGFFTDDIDFLVQSGKCDLAIHSAKDLPEK--PKARVIAITASIDPRDILVFQEKYLLQP 131 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 IG SS RR+AL+ + D RG I+TRL L+ K AI++A A + RL Sbjct: 132 FPSRLRIGCSSDRRRALISSLYPSAVITDIRGTIQTRLALLDQQKFDAIVMANAAVSRLG 191 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221 +L + P G+ AI H+ + + L I Sbjct: 192 LRLPCTVVLPPP-YHPFQGRLAITSCHHIASWEKLFLTCKI 231 >gi|297181506|gb|ADI17693.1| porphobilinogen deaminase [uncultured gamma proteobacterium HF0130_23I23] Length = 297 Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 85/314 (27%), Positives = 131/314 (41%), Gaps = 33/314 (10%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +I TR S LAL + +S + P II + T+GD+ + K F Sbjct: 1 MKIATRSSKLALEQTYFFQSWI------PKQPTKIIEIKTEGDKKSAMGEVLF-DKANFV 53 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +IE+ LI D A+HSAKDMP K L + PR D+ I Sbjct: 54 SDIEECLIKDGADVAIHSAKDMPAFKHKELDHYFFGPR-SRSDLLIFRKDID-PVFKKDM 111 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRRK + +V+ G ++TR+NKLN+ I+LA AG +RLK + Sbjct: 112 KLGTSSLRRKMQAKFYLGAKNVVPISGNVDTRINKLNSGDYDCIILAEAGCQRLKIDFED 171 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELV---------KVINHEDTWDSVNCERAF 236 + + GQG + ++ +N A+E + +VI+ E E+ Sbjct: 172 LNYIELGH-LTCAGQGVLAVQYKRDNKFAKEFLLEWKQNFLQRVIHDE-----TEMEKRL 225 Query: 237 LAELDGSCKSAIAGFAYCKG----STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292 L ++ SC SAIA A +G + G + + +S G D DA Sbjct: 226 LEKIGASCNSAIAVRANHEGPKGVDKI-IKGEIYGLN----EYISFEGKSSDVDTAINDA 280 Query: 293 AQYIRFISNKNVFN 306 ++ + + N Sbjct: 281 IDMLQNKNGLELLN 294 >gi|46445906|ref|YP_007271.1| porphobilinogen deaminase [Candidatus Protochlamydia amoebophila UWE25] gi|46399547|emb|CAF22996.1| putative Porphobilinogen deaminase [Candidatus Protochlamydia amoebophila UWE25] Length = 233 Score = 171 bits (435), Expect = 9e-41, Method: Composition-based stats. Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 5/217 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G R SPL+ A E +L + P I T GD +L ++ FT Sbjct: 18 ISVGARSSPLSRAQVQEILKALRSFY--PSIEFTISYFDTIGDLDQKTSLRDLDKTNFFT 75 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EI++ ++ + +HSAKD+P + GLQ+ D DV + ++L+ L HS Sbjct: 76 KEIDEAILQKKCQIGIHSAKDLPDPIPDGLQLICLTKGVDCSDVLVLRDGETLQTLPPHS 135 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 I TSS+RR+ ++ R+D +D RG I RL L +A +++A A + RL + Sbjct: 136 RIATSSIRRENIVKLLRNDFIFLDLRGTIHQRLALLEKKQADGVVVAEAALIRLGLTHLN 195 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 + L GQG + I ++ K Q L ++ Sbjct: 196 RIRLPGTTV---EGQGQLAIIARKDDAKMQTLFACLD 229 >gi|62999515|gb|AAY25186.1| putative porphobilinogen deaminase [Streptomyces nodosus subsp. asukaensis] Length = 167 Score = 171 bits (435), Expect = 9e-41, Method: Composition-based stats. Identities = 57/159 (35%), Positives = 87/159 (54%), Gaps = 8/159 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 KP R+GTR S LA+A + ++ +V + ++ ++T GD I+ L +IGG G+ Sbjct: 13 KPLRLGTRRSKLAMAQSGMVADAVSEVT---GRAVELVEVTTYGD-ISREHLAQIGGTGV 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F + L+ GE+D AVHS KD+PT +GL ++A RED RDV ++ + + L Sbjct: 69 FVAALRDALLRGEVDFAVHSLKDLPTAQPEGLVLAAVPVREDPRDVLVARDGLTFEQLPS 128 Query: 124 HSVIGTSSLRRKALL----LRWRSDISVIDFRGKIETRL 158 + IGT S RR A L DI + RG ++TR+ Sbjct: 129 GARIGTGSPRRMAQLNAYARNHGLDIETVPIRGNVDTRI 167 >gi|45644676|gb|AAS73064.1| predicted porphobilinogen deaminase [uncultured marine gamma proteobacterium EBAC20E09] Length = 291 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 77/248 (31%), Positives = 120/248 (48%), Gaps = 17/248 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +I +R S LALA E V K + II + T+GD I + + K F Sbjct: 2 TIKIASRSSKLALAQVEEF------VKKFGISDYKIIKVKTEGD-IKSANGETLFDKAHF 54 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +++K L++GE D AVHSAKD P GL +LP + +DV I Sbjct: 55 VSDVQKCLLNGEADIAVHSAKDTPAGETTGLLRY-FLPSQSNQDVLIFREEDKF---NSE 110 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +GTSSLRR+ + I++++ G ++TRL KL+ + I+LA AG+ RLK Sbjct: 111 MKLGTSSLRRQLQAKHHLNAINIVNLSGNVDTRLEKLSQGEYDCIILAKAGLARLKLLNE 170 Query: 185 IKEILNIEDFPPSPGQGAICIETHVN-NPKAQE-LVKVIN--HEDTWDSVNCERAFLAEL 240 + + D+ + GQG +CIE + + L+K I + +++ ER+ L + Sbjct: 171 L--QYEVMDWSTASGQGFLCIEVLNDPSADIYNFLLKSIREIDLNLGKNISTERSILEAI 228 Query: 241 DGSCKSAI 248 + C SAI Sbjct: 229 NAGCNSAI 236 >gi|15791132|ref|NP_280956.1| porphobilinogen deaminase [Halobacterium sp. NRC-1] gi|169236887|ref|YP_001690087.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Halobacterium salinarum R1] gi|25453030|sp|Q9HMY5|HEM3_HALSA RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|10581740|gb|AAG20436.1| porphobilinogen deaminase [Halobacterium sp. NRC-1] gi|167727953|emb|CAP14741.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Halobacterium salinarum R1] Length = 396 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 57/161 (35%), Positives = 95/161 (59%), Gaps = 4/161 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + R+ TR S LAL A E +L D H++ ++ + T+GDR+T+ ++++G Sbjct: 1 MSSQQIRLATRGSDLALRQAGEVVDTLEDRR----HDVELVEVETEGDRVTDALISDLGK 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G F ++++++ G +D AVHS KD+PT++ + L ++A RE+ DV ++ L+D Sbjct: 57 TGAFVRALDQEVMEGTVDAAVHSMKDVPTEVPEDLVVAAVPHRENPADVLVTPDGTDLED 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 L SV+GT+SLRR A + R + V RG + TR+ KL Sbjct: 117 LPAGSVVGTASLRRGAQVQAHRPGLDVEPIRGNVGTRVEKL 157 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 63/153 (41%), Gaps = 1/153 (0%) Query: 155 ETRLNKLNNNKAHAILLAYAGIKRLKK-EKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 ++ + + + + A+++A G++R V E L+ P+ GQGA+C+ ++ Sbjct: 238 QSAMERDPDTEYDALVMARVGLERTGLLHHVGIEELSTGTHVPATGQGALCVTARRDSDV 297 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 L + H T V ER L EL G C + I A +G T+ V + DG Sbjct: 298 VDTLRDALEHVRTRVEVTAERVVLEELGGGCIAPIGVHALVQGDTIRTAVQVFSQDGSEQ 357 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 +R + R+ A +R ++ Sbjct: 358 VGETRELDAEQYATDARELAADLRDRGAADLIE 390 >gi|218677853|ref|ZP_03525750.1| porphobilinogen deaminase [Rhizobium etli CIAT 894] Length = 123 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 79/122 (64%), Positives = 92/122 (75%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A E R LM H +P I+ L+TKGDRIT+R+L+EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEEMFEIVVLTTKGDRITDRSLSEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E+KL +GE+D AVHSAKDMPT L GL +SAYLPREDIRD + TA L D Sbjct: 61 KGLFTEELEQKLAAGELDFAVHSAKDMPTNLPDGLHLSAYLPREDIRDAVVGRTAPKLID 120 Query: 121 LA 122 L Sbjct: 121 LP 122 >gi|317471679|ref|ZP_07931020.1| porphobilinogen deaminase [Anaerostipes sp. 3_2_56FAA] gi|316900783|gb|EFV22756.1| porphobilinogen deaminase [Anaerostipes sp. 3_2_56FAA] Length = 139 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 55/143 (38%), Positives = 80/143 (55%), Gaps = 4/143 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 ME K RIG+R S LA+A L + P + ++ L T GD+I N+TL +IGG Sbjct: 1 MEPKRLRIGSRESLLAVAQTRLVIEQLKANY--PELSFELVTLKTTGDKILNKTLDKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+++ L+ G ID AVHS KD+P ++ L ++A R D RDV + ++ ++ Sbjct: 59 KGLFVKELDQALLDGRIDMAVHSMKDLPMEISDDLPVAAVPKRGDPRDVLVLPSSGDFEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRS 143 VIG+SS RR R Sbjct: 119 F--GQVIGSSSARRVLQARRLFP 139 >gi|154762311|gb|ABS86004.1| porphobilinogen deaminase [Cervus elaphus] gi|155494266|gb|ABS86002.2| porphobilinogen deaminase [Cervus elaphus] gi|155494267|gb|ABS86003.2| porphobilinogen deaminase [Cervus elaphus] gi|155494268|gb|ABS86005.2| porphobilinogen deaminase [Cervus elaphus] gi|155494269|gb|ABS86006.2| porphobilinogen deaminase [Cervus elaphus] gi|155494270|gb|ABS86007.2| porphobilinogen deaminase [Cervus elaphus] gi|155494271|gb|ABS86008.2| porphobilinogen deaminase [Cervus elaphus canadensis] gi|155494272|gb|ABS86009.2| porphobilinogen deaminase [Cervus elaphus canadensis] gi|155494273|gb|ABS86010.2| porphobilinogen deaminase [Cervus elaphus canadensis] gi|155494274|gb|ABS86011.2| porphobilinogen deaminase [Cervus elaphus canadensis] Length = 195 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 30/187 (16%) Query: 151 RGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209 RG + TRL KL+ + AI+LA AG++R+ + + +IL+ E+ + GQGA+ +E Sbjct: 1 RGNLNTRLQKLDELQEFSAIILAAAGLQRMGWQNRVGQILHPEECMYAVGQGALGVEVRA 60 Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269 + +LV V++ +T ER+FL L+G C +A K LY G V + + Sbjct: 61 KDQDILDLVGVLHDPETLLRCIAERSFLRHLEGGCSVPVAVHTTIKDGQLYLTGGVWSLN 120 Query: 270 GKIFHEVSR-----------NGNRCD------------------AINIGRDAAQYIRFIS 300 G + + +G D A N+G A + Sbjct: 121 GAETMQDTMQTTIHVPVQHEDGPEDDPQLVGITARNIPRQPQLAAENLGISLATLLLNKG 180 Query: 301 NKNVFNF 307 KN+ + Sbjct: 181 AKNILDV 187 >gi|269302924|gb|ACZ33024.1| porphobilinogen deaminase [Chlamydophila pneumoniae LPCoLN] Length = 234 Score = 168 bits (427), Expect = 8e-40, Method: Composition-based stats. Identities = 65/224 (29%), Positives = 97/224 (43%), Gaps = 7/224 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+P RI +R S LA A E S L + P + T GDR L + Sbjct: 18 KRPLRIASRNSNLAKAQVHECISLLRSWY--PKLWFQLSTTETTGDRDKKIPLHLVENSY 75 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 FT+ ++ + G D A+HSAKD+P L + A D+ + + L Sbjct: 76 FFTDGVDALVHKGVCDLAIHSAKDLP--ETPSLPVVAITRCLHPADLLVYADHYVHEPLP 133 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 L +G+SSLRR A+L + ++D RG IE RL++L+ AI+LA A RL Sbjct: 134 LRPRLGSSSLRRSAVLKQLFPQGQILDIRGTIEERLDQLHRGHYDAIVLAKAASLRLHLH 193 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226 L P QG++ I + K ++L I+ + Sbjct: 194 HAYSIELPP---PYHALQGSLAITAKDHAGKWKQLFTPIHCHSS 234 >gi|323451311|gb|EGB07188.1| hypothetical protein AURANDRAFT_59094 [Aureococcus anophagefferens] Length = 331 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 75/320 (23%), Positives = 132/320 (41%), Gaps = 28/320 (8%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLT-EIGGKGLF 64 +I TR SPLA+ A +L P ++ +S+ G+ N L + F Sbjct: 18 VKIATRPSPLAVKQAERVAETLRRA--DPALTTELVRISSTGEYRNNTPLPLALDPTVDF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPR-EDIRDVFISHTAQSLKDL 121 T ++ + SG +D AVHS KD+P L+++ +LPR E D + S+ + Sbjct: 76 TGLLDDAVGSGAVDVAVHSLKDLPPANRWRGDLRVACHLPRTESAADALVG--YASMDLV 133 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK- 180 + +GT+S RR+ALL R D+ V+ RG + RL L+ A++L AG++RL+ Sbjct: 134 PRGARVGTASQRRRALLRCARPDLDVVTVRGNVHARLETLDRGDVDALILGAAGLQRLEL 193 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL--- 237 + IL+ ++ P+P QG + + +L+ + D + ERA L Sbjct: 194 LDARRHAILSFDEMLPAPAQGIVGAVARGDGGALGDLLARADDRDARIAATAERAVLDVA 253 Query: 238 --AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG------ 289 A + + G+ + DG + + +A +G Sbjct: 254 DAASPGAG-RPPTSAAMTRDGAAWLLRARLTRPDGS---RSAATTSTVEADQLGDGDAAA 309 Query: 290 ----RDAAQYIRFISNKNVF 305 A + + + + F Sbjct: 310 REFGAAAGRDLLRRAGPDFF 329 >gi|15617976|ref|NP_224260.1| porphobilinogen deaminase [Chlamydophila pneumoniae CWL029] gi|15835588|ref|NP_300112.1| porphobilinogen deaminase [Chlamydophila pneumoniae J138] gi|16752992|ref|NP_445265.1| porphobilinogen deaminase [Chlamydophila pneumoniae AR39] gi|33241388|ref|NP_876329.1| porphobilinogen deaminase [Chlamydophila pneumoniae TW-183] gi|11386861|sp|Q9Z9C9|HEM3_CHLPN RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|4376307|gb|AAD18205.1| Porphobilinogen Deaminase [Chlamydophila pneumoniae CWL029] gi|7189637|gb|AAF38528.1| porphobilinogen deaminase HemC, putative [Chlamydophila pneumoniae AR39] gi|8978426|dbj|BAA98263.1| porphobilinogen deaminase [Chlamydophila pneumoniae J138] gi|33235896|gb|AAP97986.1| hydroxymethylbilane synthase [Chlamydophila pneumoniae TW-183] Length = 234 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 65/224 (29%), Positives = 97/224 (43%), Gaps = 7/224 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+P RI +R S LA A E S L + P + T GDR L + Sbjct: 18 KRPLRIASRNSNLAKAQVHECISLLRSWY--PKLWFQLSTTETTGDREKKIPLHLVENSY 75 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 FT+ ++ + G D A+HSAKD+P L + A D+ + + L Sbjct: 76 FFTDGVDALVHKGVCDLAIHSAKDLP--ETPSLPVVAITRCLHPADLLVYADHYVHEPLP 133 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 L +G+SSLRR A+L + ++D RG IE RL++L+ AI+LA A RL Sbjct: 134 LSPRLGSSSLRRSAVLKQLFPQGQILDIRGTIEERLDQLHRGHYDAIVLAKAASLRLHLH 193 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226 L P QG++ I + K ++L I+ + Sbjct: 194 HAYSIELPP---PYHALQGSLAITAKDHAGKWKQLFTPIHCHSS 234 >gi|154762327|gb|ABS86012.1| porphobilinogen deaminase [Capra hircus] gi|154762329|gb|ABS86013.1| porphobilinogen deaminase [Capra hircus] Length = 195 Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 30/187 (16%) Query: 151 RGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209 RG + TRL KL+ + AI+LA AG++R+ + + +IL+ E+ + GQGA+ +E Sbjct: 1 RGNLNTRLRKLDELQEFSAIILAAAGLQRMGWQNRVGQILHPEECMYAVGQGALGVEVRA 60 Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269 + +LV V++ +T ER+FL L+G C +A K LY G V + + Sbjct: 61 KDQDILDLVGVLHDPETLLRCIAERSFLRHLEGGCSVPVAVHTAIKDGQLYLTGGVWSLN 120 Query: 270 GKIFHEVSR-----------NGNRCD------------------AINIGRDAAQYIRFIS 300 G + + +G D A N+G A + Sbjct: 121 GAETMQDTMQTTIHVPVQHEDGPEDDPQLVGITARNIPRQPQLAAENLGISLATLLLNKG 180 Query: 301 NKNVFNF 307 KN+ + Sbjct: 181 AKNILDV 187 >gi|282892112|ref|ZP_06300587.1| hypothetical protein pah_c207o043 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498007|gb|EFB40351.1| hypothetical protein pah_c207o043 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 221 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 6/221 (2%) Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 R SPL+ A E + +L H P ++ + ++T GD+ +L + FT+E+ Sbjct: 2 AARESPLSKAQVLEVQQALHPHH--PMIELIPVWVATTGDKQQEISLRNMEKTDFFTKEL 59 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128 + L+SG+ D AVHSAKD+P L +GL + A D RDV + SL L ++I Sbjct: 60 DALLLSGQCDVAVHSAKDLPDPLPQGLSLIALTEGVDNRDVLVIREGLSLAALPQAAMIA 119 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188 TSS RR+ R+D +D RG I RL+ L A I++A A + RL + + Sbjct: 120 TSSERREQQARMLRTDFRFMDLRGTIGQRLSLLEAGVADGIIVAEAALIRLGLCHLNRVY 179 Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 L E +P QG + I + + +E+ + ++ Sbjct: 180 LPGET---APMQGRLAILAKTEHVEMREIFACL-DAESGLC 216 >gi|15605020|ref|NP_219804.1| porphobilinogen deaminase [Chlamydia trachomatis D/UW-3/CX] gi|76789021|ref|YP_328107.1| porphobilinogen deaminase [Chlamydia trachomatis A/HAR-13] gi|255311101|ref|ZP_05353671.1| porphobilinogen deaminase [Chlamydia trachomatis 6276] gi|255317402|ref|ZP_05358648.1| porphobilinogen deaminase [Chlamydia trachomatis 6276s] gi|255506878|ref|ZP_05382517.1| porphobilinogen deaminase [Chlamydia trachomatis D(s)2923] gi|301335770|ref|ZP_07224014.1| porphobilinogen deaminase [Chlamydia trachomatis L2tet1] gi|11386778|sp|O84301|HEM3_CHLTR RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|3328714|gb|AAC67892.1| Porphobilinogen Deaminase [Chlamydia trachomatis D/UW-3/CX] gi|76167551|gb|AAX50559.1| porphobilinogen deaminase [Chlamydia trachomatis A/HAR-13] gi|296435816|gb|ADH17990.1| porphobilinogen deaminase [Chlamydia trachomatis G/9768] gi|296436741|gb|ADH18911.1| porphobilinogen deaminase [Chlamydia trachomatis G/11222] gi|296437676|gb|ADH19837.1| porphobilinogen deaminase [Chlamydia trachomatis G/11074] gi|297140175|gb|ADH96933.1| porphobilinogen deaminase [Chlamydia trachomatis G/9301] gi|297748428|gb|ADI50974.1| Porphobilinogen deaminase [Chlamydia trachomatis D-EC] gi|297749308|gb|ADI51986.1| Porphobilinogen deaminase [Chlamydia trachomatis D-LC] Length = 241 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 64/213 (30%), Positives = 95/213 (44%), Gaps = 5/213 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+ +R S LA+ A E L P II +T+GD L + G F Sbjct: 20 PLRLASRQSSLAVLQAHECLRKLQIF--FPRLWGQIITTTTQGDLDQETPLCAVENTGFF 77 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T++++ + SG+ D +HSAKD+P + + D RD+ + H L Sbjct: 78 TDDVDFLVQSGQCDLGIHSAKDLPEN--PKATVVSITASIDPRDILVFHEKYLSIPLPRR 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IG+SS+RRK LL + D RG I+TRL L AI++A A + RL Sbjct: 136 LRIGSSSVRRKELLSLLYPSAIITDIRGTIQTRLKLLEEKNFDAIVMANAAVSRLGLRLP 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217 +IL + P G+ AI H+ + + L Sbjct: 196 CTKILPPP-YHPLQGRLAITASRHIRSWRGLFL 227 >gi|255348660|ref|ZP_05380667.1| porphobilinogen deaminase [Chlamydia trachomatis 70] gi|255503200|ref|ZP_05381590.1| porphobilinogen deaminase [Chlamydia trachomatis 70s] gi|296434889|gb|ADH17067.1| porphobilinogen deaminase [Chlamydia trachomatis E/150] gi|296438609|gb|ADH20762.1| porphobilinogen deaminase [Chlamydia trachomatis E/11023] Length = 241 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 64/213 (30%), Positives = 95/213 (44%), Gaps = 5/213 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+ +R S LA+ A E L P II +T+GD L + G F Sbjct: 20 PLRLASRQSSLAVLQAHECLRKLQIF--FPRLWGQIITTTTQGDLDQETPLCAVENTGFF 77 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T++++ + SG+ D +HSAKD+P + + D RD+ + H L Sbjct: 78 TDDVDFLVQSGQCDLGIHSAKDLPEN--PKATVISITASIDPRDILVFHEKYLSIPLPRR 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IG+SS+RRK LL + D RG I+TRL L AI++A A + RL Sbjct: 136 LRIGSSSVRRKELLSLLYPSAIITDIRGTIQTRLKLLEEKNFDAIVMANAAVSRLGLRLP 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217 +IL + P G+ AI H+ + + L Sbjct: 196 CTKILPPP-YHPLQGRLAITASRHIRSWRGLFL 227 >gi|293194091|ref|ZP_06609931.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Actinomyces odontolyticus F0309] gi|292819785|gb|EFF78795.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Actinomyces odontolyticus F0309] Length = 177 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 58/170 (34%), Positives = 88/170 (51%), Gaps = 3/170 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV--IIPLSTKGDRITNRTLTEI 58 M + F +GTR S LALA + ++ + + + + T GD ++ L + Sbjct: 1 MTTRTFVLGTRGSRLALAQSTTVARAIEEAGARLGEEVRVNLEVVRTHGD-VSAEPLAAL 59 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GG G+F ++ L+ GE D AVHS KD+PT GL+I+A RED RD + +L Sbjct: 60 GGVGVFAAQLRLALLGGECDLAVHSFKDLPTAPTPGLRIAAVPQREDPRDALCAADGATL 119 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA 168 L +++GT S RR A +L R D+ V D RG + TRL+++ A Sbjct: 120 ASLPEGALVGTGSPRRAAQVLAARPDLFVCDLRGNVPTRLSRVRGLDLGA 169 >gi|149041455|gb|EDL95296.1| hydroxymethylbilane synthase, isoform CRA_b [Rattus norvegicus] Length = 192 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 46/125 (36%), Positives = 65/125 (52%), Gaps = 5/125 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + L ++ P II +ST GD+I + L++IG K L Sbjct: 3 RVIRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKSL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 61 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLET 120 Query: 121 LALHS 125 L S Sbjct: 121 LPEKS 125 >gi|149041456|gb|EDL95297.1| hydroxymethylbilane synthase, isoform CRA_c [Rattus norvegicus] Length = 208 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 46/125 (36%), Positives = 65/125 (52%), Gaps = 5/125 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + L ++ P II +ST GD+I + L++IG K L Sbjct: 19 RVIRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKSL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 77 FTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLET 136 Query: 121 LALHS 125 L S Sbjct: 137 LPEKS 141 >gi|260829671|ref|XP_002609785.1| hypothetical protein BRAFLDRAFT_280323 [Branchiostoma floridae] gi|229295147|gb|EEN65795.1| hypothetical protein BRAFLDRAFT_280323 [Branchiostoma floridae] Length = 140 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 51/137 (37%), Positives = 71/137 (51%), Gaps = 5/137 (3%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + +SL + + II +ST GD+I + L++IG K LFT+E+EK L G Sbjct: 1 MIQTNSVVASLKKL--CDDVDFEIISMSTTGDKILDTALSKIGEKSLFTKELEKALDDGR 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGTSSLR 133 +D VHS KD+ + L + I A L RED D + H + L DL +SVIGTSS+R Sbjct: 59 VDFVVHSLKDLQSTLPPNMVIGAVLEREDPYDAVLMHPKHATKCLADLPENSVIGTSSVR 118 Query: 134 RKALLLRWRSDISVIDF 150 R A L R + Sbjct: 119 RVAQLKRKYPHLKFESV 135 >gi|323338379|gb|EGA79604.1| Hem3p [Saccharomyces cerevisiae Vin13] Length = 152 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 4/149 (2%) Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGI 176 ++GTSS+RR A L R + RG I+TRL KL++ K I+LA AG+ Sbjct: 1 MTFQTGGIVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIILASAGL 60 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ E I + + + + GQGA+ IE + K +++ I + ERA Sbjct: 61 MRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCLSERAL 120 Query: 237 LAELDGSCKSAIAGFAYCKGST--LYFYG 263 + L+G C I + T + G Sbjct: 121 MRTLEGGCSVPIGVESKYNEETKKITIKG 149 >gi|222480661|ref|YP_002566898.1| porphobilinogen deaminase [Halorubrum lacusprofundi ATCC 49239] gi|222453563|gb|ACM57828.1| porphobilinogen deaminase [Halorubrum lacusprofundi ATCC 49239] Length = 385 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 52/164 (31%), Positives = 85/164 (51%), Gaps = 4/164 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+ TR S LAL A R +L + ++ + + T+GD+I + + +G G F Sbjct: 4 TLRLATRGSDLALRQAGTVRDALSSRRR----DVELRRVETRGDQIPDEMIHRLGKTGAF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 ++++++ G+ D AVHS KD+PT+ + + I+ R DV + ++DL Sbjct: 60 VRALDEEVLGGDADLAVHSLKDVPTEGMDDMVIAGVPERAPSGDVLVHPDGLGIEDLPSG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA 168 SV+GT SLRR A + R D+ V RG ++TR+ KL A Sbjct: 120 SVVGTGSLRRTAQIKAARPDLVVEPLRGNVDTRVEKLLAPDLQA 163 Score = 107 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 2/152 (1%) Query: 156 TRLNKLNNNKAHAILLAYAGIKRLKK-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKA 214 + + + + AI+LA AG++R + +V L E+F P+ GQGAI + + Sbjct: 219 SAMERKVETEYDAIVLAEAGLRRSELFYEVPTTRLPREEFVPAAGQGAIAVTA-TDPDVI 277 Query: 215 QELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFH 274 +++ ++H T +V ER L EL+G C + I A +G ++ VL++DG Sbjct: 278 EDVRSAVDHPRTRVAVTVERTILGELNGGCVAPIGVSALVQGEHVHTRVRVLSTDGTEEV 337 Query: 275 EVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 +R+ + A + + Sbjct: 338 ADTRDLPIRSHAKAAEEFAADLADRGAAELIE 369 >gi|307254894|ref|ZP_07536716.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306862135|gb|EFM94107.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] Length = 119 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 2/104 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR SPLAL A + L + P ++ ++ + TKGD I + L +IGGKG Sbjct: 7 KDTLRIATRQSPLALWQANFVKDELEK--RFPELSVELVTMVTKGDVILDTPLAKIGGKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI 106 LF +E+E L+ D AVHS KD+P +GL ++ RED Sbjct: 65 LFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDP 108 >gi|166154510|ref|YP_001654628.1| porphobilinogen deaminase [Chlamydia trachomatis 434/Bu] gi|166155385|ref|YP_001653640.1| porphobilinogen deaminase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|237802722|ref|YP_002887916.1| porphobilinogen deaminase [Chlamydia trachomatis B/Jali20/OT] gi|237804644|ref|YP_002888798.1| porphobilinogen deaminase [Chlamydia trachomatis B/TZ1A828/OT] gi|165930498|emb|CAP03991.1| porphobilinogen deaminase [Chlamydia trachomatis 434/Bu] gi|165931373|emb|CAP06945.1| porphobilinogen deaminase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|231272944|emb|CAX09855.1| porphobilinogen deaminase [Chlamydia trachomatis B/TZ1A828/OT] gi|231273956|emb|CAX10748.1| porphobilinogen deaminase [Chlamydia trachomatis B/Jali20/OT] Length = 219 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 62/209 (29%), Positives = 92/209 (44%), Gaps = 5/209 (2%) Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 +R S LA+ A E L P II +T+GD L + G FT+++ Sbjct: 2 ASRQSSLAVLQAHECLRKLQIF--FPRLWGQIITTTTQGDLDQETPLCAVENTGFFTDDV 59 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128 + + SG+ D +HSAKD+P + + D RD+ + H L IG Sbjct: 60 DFLVQSGQCDLGIHSAKDLPEN--PKATVVSITASIDPRDILVFHEKYLSIPLPRRLRIG 117 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188 +SS+RRK LL + D RG I+TRL L AI++A A + RL +I Sbjct: 118 SSSVRRKELLSLLYPSAIITDIRGTIQTRLKLLEEKNFDAIVMANAAVSRLGLRLPCTKI 177 Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQEL 217 L + P G+ AI H+ + + L Sbjct: 178 LPPP-YHPLQGRLAITASRHIRSWRGLFL 205 >gi|289525338|emb|CBJ14814.1| porphobilinogen deaminase [Chlamydia trachomatis Sweden2] Length = 219 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 62/209 (29%), Positives = 92/209 (44%), Gaps = 5/209 (2%) Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 +R S LA+ A E L P II +T+GD L + G FT+++ Sbjct: 2 ASRQSSLAVLQAHECLRKLQIF--FPRLWGQIITTTTQGDLDQETPLCAVENTGFFTDDV 59 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128 + + SG+ D +HSAKD+P + + D RD+ + H L IG Sbjct: 60 DFLVQSGQCDLGIHSAKDLPEN--PKATVISITASIDPRDILVFHEKYLSIPLPRRLRIG 117 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188 +SS+RRK LL + D RG I+TRL L AI++A A + RL +I Sbjct: 118 SSSVRRKELLSLLYPSAIITDIRGTIQTRLKLLEEKNFDAIVMANAAVSRLGLRLPCTKI 177 Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQEL 217 L + P G+ AI H+ + + L Sbjct: 178 LPPP-YHPLQGRLAITASRHIRSWRGLFL 205 >gi|262277145|ref|ZP_06054938.1| Putative porphobilinogen deaminase (pbg)(hydroxymethylbilane synthase) (hmbs) (pre-uroporphyrinogen synthase) [alpha proteobacterium HIMB114] gi|262224248|gb|EEY74707.1| Putative porphobilinogen deaminase (pbg)(hydroxymethylbilane synthase) (hmbs) (pre-uroporphyrinogen synthase) [alpha proteobacterium HIMB114] Length = 492 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 86/293 (29%), Positives = 122/293 (41%), Gaps = 31/293 (10%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LA F + L K STKGD+ + G G+FT Sbjct: 5 LIIGSRASFLAKIQTFIVKQELKKKIKNIKITTKYH--STKGDKNQGHMPWKNLGYGIFT 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + +LI+ +C VHS KD+P LK + R+D RDV + K Sbjct: 63 TSLTNELINKNFNCVVHSYKDLPV--LKSKTDYYVITRDDPRDVLLVKKKCLNK---KKF 117 Query: 126 VIGTSSLRRKALLLRWR-----SDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKR- 178 ++GTSS RRK+ + + DI RG + TRL K+ + N+ A+ +A A I R Sbjct: 118 IVGTSSPRRKSSVKDLKDLTGIKDIKTKTIRGNVTTRLLKVISKNQYDAVFMAKAAIDRI 177 Query: 179 ---------------LKK-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 L +K IL + FP + QGAI +E N+ K + + IN Sbjct: 178 FKYGNKVDKVETKKFLNLFKKFKPFILPLSIFPTAASQGAIAVEYLKNDKKTKSTLNKIN 237 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAG-FAYCKGSTLYFYGIVLASDGKIFH 274 + T N ER+ L + G C I K + F V A + K FH Sbjct: 238 CKKTLSICNQERSLLKKYGGGCGLDIGITIEEIKNNNFLFSKGVDARNKKEFH 290 >gi|110669321|ref|YP_659132.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Haloquadratum walsbyi DSM 16790] gi|109627068|emb|CAJ53547.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Haloquadratum walsbyi DSM 16790] Length = 394 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 60/162 (37%), Positives = 88/162 (54%), Gaps = 6/162 (3%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + TR S LAL A + +L D + + +I + T+GD+I + + ++G Sbjct: 7 TRGTLTLATRGSDLALKQATSVQEALTDER----YEVDLIEVETRGDQIQDELIHQLGKT 62 Query: 62 GLFTEEIEKKLIS--GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G F ++KK++ E D AVHS KDMPT L ++ R D+ I+ Q L Sbjct: 63 GAFVRALDKKVLDPTAEADAAVHSMKDMPTDSPDDLVVAGIPQRAPPGDLLITTDGQRLS 122 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 DL + IGTSSLRR+A LL R+DI+V RG I+TR+ KL Sbjct: 123 DLPSGATIGTSSLRRQAQLLDQRTDITVEPLRGNIDTRIEKL 164 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 42/149 (28%), Positives = 62/149 (41%), Gaps = 1/149 (0%) Query: 158 LNKLNNNKAHAILLAYAGIKRLKK-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE 216 L + + AI+LA AG++R + L+ F P+PGQGAI I T + Sbjct: 228 LERSVETEYDAIVLAEAGLQRSGLIHHIEYVQLDTTTFVPAPGQGAIAITTQGEANATAQ 287 Query: 217 LVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV 276 + + I+H T ER LAEL G C + I A +G ++ V ASDG + Sbjct: 288 IREAIDHPRTRVETTVERTVLAELGGGCIAPIGVHATLQGEYVHVAAQVFASDGTETVDG 347 Query: 277 SRNGNRCDAINIGRDAAQYIRFISNKNVF 305 SRN + A + + Sbjct: 348 SRNLPVDAHADAAAQFANKLADRGADELI 376 >gi|315186776|gb|EFU20534.1| uroporphyrin-III C-methyltransferase [Spirochaeta thermophila DSM 6578] Length = 661 Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats. Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 10/224 (4%) Query: 15 LALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLI 73 LALA E + D + L +GDR L + G FT+ +++ L+ Sbjct: 2 LALAQVREWIARWRDASPEAGEVKWEPVVLHPRGDRDKRTPLHLVEGSDFFTDALDEALL 61 Query: 74 SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIR-DVFISHT----AQSLKDLALHSVIG 128 G ID A+HSAKD+P L +GL ++A P E R DV + H A S+++L IG Sbjct: 62 VGRIDVALHSAKDLPDDLREGLSLAAITPLEGPREDVLVLHPRWASASSVEELPAGLRIG 121 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188 TSS RR+ L RSD ++D RG IE RL ++++ + +++A + ++ Sbjct: 122 TSSARRREQLSHLRSDWELVDIRGTIEERLARVSSGEIDGVVMAALALT----RLALEVP 177 Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 F P P QG + + +A L V++ W V Sbjct: 178 HLPLPFVPHPLQGRLAAVVREGDEEAHRLCDVLDDRGRWGRVAI 221 >gi|294885317|ref|XP_002771270.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983] gi|239874766|gb|EER03086.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983] Length = 556 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 68/301 (22%), Positives = 113/301 (37%), Gaps = 42/301 (13%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E IG+R S LA L D + + GD L ++ Sbjct: 6 EPSVLHIGSRRSDLARLQTLMIADLLQDEMGV---KVECHYREAPGDTNLKDPLWKMPET 62 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT + L++G D VHS KD+P G + A LPR D RD+ + + Sbjct: 63 GVFTSFLRDGLMNGAFDLVVHSWKDLPLAEESGTTVVATLPRADPRDLLLIRRDAIEEMT 122 Query: 122 ALHS--VIGTSSLRRKALLLRWR-------SDISVIDFRGKIETRLNKLNNN-------- 164 + ++ +SS RR+ L + + + D RG I+TR+ KL + Sbjct: 123 SEGGKLIVLSSSPRRQFNLTPFLESVVPGVTSVQFRDVRGNIQTRMKKLMDPTIHDESLG 182 Query: 165 -KAHAILLAYAGIKRLKKEKV-----------------IKEILNIEDFPPSPGQGAICIE 206 + H +++A A + R + +L + P + QGA+ IE Sbjct: 183 CRPHGLVVAKAAVDRFIRSTREEFKESRQLVQGYISECRCMVLPLSANPTAAAQGALGIE 242 Query: 207 THV--NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG--FAYCKGSTLYFY 262 +++V+ +N T+D+ + E+ L G C I G L+ Sbjct: 243 VSTAPEKEHVRKIVRSLNDRSTFDAASKEKELLNSYGGGCHQKIGCTILPRQYGDVLFLC 302 Query: 263 G 263 G Sbjct: 303 G 303 >gi|300726136|ref|ZP_07059593.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Prevotella bryantii B14] gi|299776606|gb|EFI73159.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Prevotella bryantii B14] Length = 226 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 93/207 (44%), Gaps = 10/207 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE-IGGKGL 63 P R+ R S L+ E + L I+ T GD+ + +L + Sbjct: 9 PIRVIARRSKLSQLQVAEVFNRLK------DIPYTIVFTDTFGDKRLDLSLLNGEAPDDM 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT E++ L+ + D A+HSAKD+P L L++ A D D +S L DL Sbjct: 63 FTRELDWALLHDDADIAIHSAKDLPEHLHPDLEVIALYEAFDKTDALVSRDHIKLMDLPA 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S +GTSS RK L R D+ ++ RG IE R+ ++ + K ++A +KRL E Sbjct: 123 GSTVGTSSPLRKKGLSELRPDLKIVGIRGCIEDRVAQVRDGKLDCAIVATCALKRLGMED 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVN 210 I EIL FP P QG + I Sbjct: 183 EITEILP---FPTHPMQGRLAITAKRG 206 >gi|218513448|ref|ZP_03510288.1| porphobilinogen deaminase [Rhizobium etli 8C-3] Length = 137 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 63/137 (45%), Positives = 94/137 (68%) Query: 156 TRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215 TRL KL + A LLA AG+KRL K +V+ +IL+ + FPP+P QGAICIE+ + + + Sbjct: 1 TRLRKLEEGQVDATLLALAGLKRLGKVEVLTDILDPDTFPPAPAQGAICIESRIGDSRID 60 Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275 +L+ +N T+D+V+CERAFLA LDGSC++ I G+A C+G + F G+++ DG+ H Sbjct: 61 DLLAAVNDAATFDTVSCERAFLAALDGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHA 120 Query: 276 VSRNGNRCDAINIGRDA 292 V+ +G+R DA +G A Sbjct: 121 VTTDGHRRDAAALGTRA 137 >gi|3172401|gb|AAC18584.1| porphobilinogen deaminase [Lysinibacillus sphaericus] Length = 109 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 2/109 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + L P + + TKGD+I + L+++GGKGL Sbjct: 3 RKIIVGSRRSKLALTQTNWFINELKAAGV--PFEFEVKEIVTKGDQILDVQLSKVGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS 112 F +EIE+ L EID AVHS KDMP L +GL I PRED RD FIS Sbjct: 61 FVKEIEQALFDKEIDFAVHSMKDMPAVLPEGLVIGCIPPREDARDAFIS 109 >gi|330444348|ref|YP_004377334.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain-containing protein [Chlamydophila pecorum E58] gi|328807458|gb|AEB41631.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Chlamydophila pecorum E58] Length = 237 Score = 149 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 7/226 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +I +R S LA A E L + P ++I T+GDR L I F Sbjct: 19 PLKIASRDSNLAKAQVNECLQLLRTSY--PKLQSLLITTKTQGDRDKLTPLHTIENSDFF 76 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T +++ + G A+HSAKD+PT L + A D+ + + + + Sbjct: 77 TRDVDALVCQGSCHIAIHSAKDLPT--PSPLPLVALTRCLHPADLLVYADHYTKEPFPSN 134 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +G+SS+RR +L + +++ RG IE RL +L+NN A++LA A RL + Sbjct: 135 PRLGSSSMRRGEVLKQLFPLGQILNIRGTIEERLQQLHNNTYDAVVLAKAAALRLGLSFL 194 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 E+L P P QG + + + + + + I+ + S+ Sbjct: 195 YSELLPP---PYHPLQGRLALTAYESIDLWRTFLSPIHDTNLRYSI 237 >gi|266622116|ref|ZP_06115051.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Clostridium hathewayi DSM 13479] gi|288866179|gb|EFC98477.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Clostridium hathewayi DSM 13479] Length = 107 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 53/108 (49%), Positives = 62/108 (57%), Gaps = 2/108 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RIGTR S LA+ +L V P I+ T+GDRI N+ L E GGKG Sbjct: 2 NKTIRIGTRKSALAMVQTELVAEALKQVQ--PGLETRIVTKVTEGDRILNKPLLEFGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF 110 +F E E+ L +GEID AVHSAKD+P L GL I A PRED RDV Sbjct: 60 VFVTEFEQALQNGEIDFAVHSAKDLPMDLEDGLGIVAVPPREDPRDVL 107 >gi|260890849|ref|ZP_05902112.1| hydroxymethylbilane synthase [Leptotrichia hofstadii F0254] gi|260859402|gb|EEX73902.1| hydroxymethylbilane synthase [Leptotrichia hofstadii F0254] Length = 135 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 2/134 (1%) Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 +LA AG+KR+ E I E + + F P+PGQG +CI+ N+ K L+K+IN ++ Sbjct: 1 MLAAAGLKRVGLENRITEYFDTDSFMPAPGQGILCIQCRENDNKILNLLKIINDDEVTIM 60 Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 ER F DG C + I + +G+TL G+ +G + GNR + Sbjct: 61 CKAEREFSKIFDGGCHTPIGCSSVIEGNTLKLKGM-FNDNGTRIFK-EVEGNRENPKETA 118 Query: 290 RDAAQYIRFISNKN 303 + A+ I+ KN Sbjct: 119 QKLAEEIKEEEMKN 132 >gi|327493887|gb|AEA86530.1| porphobilinogen deaminase [Euglena gracilis] Length = 210 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 12/179 (6%) Query: 140 RWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGIKRLKKEKVIKEILNIED---F 194 + D RG ++TRL KL + A++LA +G++RL + E+L D F Sbjct: 1 HQFPHLLFKDVRGNVQTRLAKLEDPTHGYAALVLAVSGLERLALGHHVTEVLASTDRRWF 60 Query: 195 PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254 + GQGA+ ++ + ++ ++H++T ERA + EL+G C + IA Sbjct: 61 GYAVGQGALTVQCREGDAGTLRYLQHLHHQETAQRCIAERALMRELEGGCHAPIAVETRT 120 Query: 255 ------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR-FISNKNVFN 306 L + + DG+ + +A +GR A+ IR + + Sbjct: 121 FTEPGQPEPQLCLTAALYSLDGRQCVQRRLCQPAVEAEALGRAVAKAIREADGAAAILD 179 >gi|62319114|dbj|BAD94270.1| hydroxymethylbilane synthase [Arabidopsis thaliana] Length = 130 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 3/129 (2%) Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + IL++++ P+ QGAI I ++ K + +NHE+T +++CERAFL L Sbjct: 1 MTENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETL 60 Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIR 297 DGSC++ IAG+A + F G+V + DG E SR G D + +G+DA Q + Sbjct: 61 DGSCRTPIAGYASKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELL 120 Query: 298 FISNKNVFN 306 + F Sbjct: 121 SRAGPGFFG 129 >gi|297521378|ref|ZP_06939764.1| porphobilinogen deaminase [Escherichia coli OP50] Length = 92 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 2/94 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKG 94 KGLF +E+E L+ D AVHS KD+P + +G Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQG 92 >gi|225020272|ref|ZP_03709464.1| hypothetical protein CORMATOL_00275 [Corynebacterium matruchotii ATCC 33806] gi|224947016|gb|EEG28225.1| hypothetical protein CORMATOL_00275 [Corynebacterium matruchotii ATCC 33806] Length = 152 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 1/149 (0%) Query: 158 LNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217 + K+++ + A++LAYAG+ R+ + E+ + +F P+P QGA+ +E ++ Sbjct: 1 MAKVHDGELDAVVLAYAGLSRVHRADEATEVFDPLEFLPAPAQGALAVECRADDADTIAA 60 Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTL-YFYGIVLASDGKIFHEV 276 + I + + ER LA L+ C + +A +A + + V+A DG Sbjct: 61 ITTIADSKAYACAHTERVVLARLEAGCTAPVAAYATVAADNIMTLHAAVIAMDGSATLRA 120 Query: 277 SRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + G A N+G A+ + ++ Sbjct: 121 TAAGPIDTAENLGMTVARALLDDGASSLL 149 >gi|297170259|gb|ADI21296.1| porphobilinogen deaminase [uncultured gamma proteobacterium HF0010_09F21] Length = 282 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 72/286 (25%), Positives = 119/286 (41%), Gaps = 28/286 (9%) Query: 36 HNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGL 95 + VI + TKGD+ + + T+ K F ++IE+K+ SG+ID AVHSAKD+P K Sbjct: 7 EDYVIEKIVTKGDKESAKGRTQF-DKLNFVQDIEEKISSGDIDIAVHSAKDLPATESKEF 65 Query: 96 QISAYLPREDIRDVF------ISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVID 149 + RE D+ I ++ K + ++GTSSLRRK + Sbjct: 66 DY--FYLRESTEDISTWSSDRIIFRDKNKKKFSSEMILGTSSLRRKMQAKFLLGAEKIFS 123 Query: 150 FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209 G I+TR+ KLN+ + I+LA AG RL + DF QG IC++ Sbjct: 124 LNGNIDTRIRKLNSGEYDCIILANAGCTRLGFNLNSYNL----DFLTPSAQGLICLQCLK 179 Query: 210 NNPKAQELVKVINHEDTW----DSVNCERAFLAELDGSCKSAIAGFA----YCKGSTLYF 261 +++ +D + ++ ++FL ++ C SAI+ + Sbjct: 180 G-TDISKMLNNFFDKDKYKIHKLGMDIYKSFLRNINADCNSAISVRSVGNGRIANGEHKL 238 Query: 262 YGIVLASDGK-IFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 V GK F + D + A + + K + + Sbjct: 239 TFQVF---GKNEFFSAEKT--HSDPQKLIELATEEFNRNNAKKLLD 279 >gi|317471677|ref|ZP_07931019.1| porphobilinogen deaminase domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|316900848|gb|EFV22820.1| porphobilinogen deaminase domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 133 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 2/135 (1%) Query: 164 NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223 + A+++A AG+KR ++ I ++E+ P+ GQG +C++ + Q L I+ Sbjct: 1 GQYSALIMAAAGLKRAGLKERISRYFSVEEMLPAAGQGTLCVQVRKDFD--QSLFFCIHD 58 Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283 +T ER F+ LDG C S IA +A G+ L G+ + ++S NG Sbjct: 59 RETELVTEAERGFVRALDGGCSSPIAAYAEITGNDLCLTGLYYNAADNTGRKMSINGKAQ 118 Query: 284 DAINIGRDAAQYIRF 298 DA +G A+ I+ Sbjct: 119 DAGELGCRLAEQIQE 133 >gi|41186|emb|CAA47279.1| hydroxymethylbilane synthase [Escherichia coli K-12] Length = 89 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 2/91 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91 KGLF +E+E L+ D AVHS KD+P + Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEF 89 >gi|302850188|ref|XP_002956622.1| hypothetical protein VOLCADRAFT_119454 [Volvox carteri f. nagariensis] gi|300258149|gb|EFJ42389.1| hypothetical protein VOLCADRAFT_119454 [Volvox carteri f. nagariensis] Length = 206 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 16/198 (8%) Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L S +GTSS RR A + + V+ RG +ETRL ++ + + A +L+ AG++RL Sbjct: 1 ELMPGSRVGTSSSRRAAQIRHGFPHLQVVQLRGNVETRLERIKSREISATVLSMAGLQRL 60 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E + +L++++ P+ QGA+ + ++P + + I+H T+ V+ ERA L Sbjct: 61 GCEDMASAVLSMDEMLPAACQGAVGVVCREDDPWVIQQLTAISHRSTFLEVSAERACLTA 120 Query: 240 LDG-------SCKSAI---AGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNG----NRC 283 L G A T+ V G+ + N+ Sbjct: 121 LLGSEEAGRAGEHFPALAWGCHASHHPDSATMDLDCFVSDLQGEGLTRYTEYDRLILNQT 180 Query: 284 DAINIGRDAAQYIRFISN 301 DA ++G +R ++ Sbjct: 181 DAEDLGSLYGNLMRMVAG 198 >gi|70933882|ref|XP_738249.1| porphobilinogen deaminase [Plasmodium chabaudi chabaudi] gi|56514312|emb|CAH88223.1| porphobilinogen deaminase, putative [Plasmodium chabaudi chabaudi] Length = 144 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 46/121 (38%), Positives = 72/121 (59%), Gaps = 2/121 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIG 59 K IGTR SPLA+ + + + L+ K N+++ P+ T GD+I ++T+ G Sbjct: 22 ANKEIIIGTRNSPLAIKQSEKVKKKLLTYFKKINQNINVILKPIKTTGDKILDKTVGSFG 81 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKG+FT+E++ +LI +D VHS KD+PT L + +S +L R+ I D F+S +SL Sbjct: 82 GKGIFTKELDDELIKNNVDICVHSLKDIPTVLPDNIHLSCFLKRDTINDAFLSIKYKSLH 141 Query: 120 D 120 D Sbjct: 142 D 142 >gi|255029220|ref|ZP_05301171.1| porphobilinogen deaminase [Listeria monocytogenes LO28] Length = 128 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 2/119 (1%) Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL +L+G C+ Sbjct: 6 EDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKKLNGGCEI 65 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IAGFA + F G+V +DG I E + G + IG A+ + + Sbjct: 66 PIAGFATRANEFVQFKGLVGNADGSIILESEQVG--ANPSEIGNKVAEDLLSEGADTII 122 >gi|330937205|gb|EGH41226.1| porphobilinogen deaminase [Pseudomonas syringae pv. pisi str. 1704B] Length = 119 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 49/109 (44%) Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + GQGA+ IE + + L+ ++HEDT V ER+ L+G C+ IA +A +G Sbjct: 1 AGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHLNGGCQVPIACYAVLEG 60 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 ++ G+V G + + A +G A+ + ++ Sbjct: 61 DDVWLRGLVGDPSGSVLLHADARAPQTSAQALGVQVAEALLEQGAADIL 109 >gi|146332076|gb|ABQ22544.1| porphobilinogen deaminase-like protein [Callithrix jacchus] Length = 163 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 58/154 (37%), Gaps = 29/154 (18%) Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + +IL+ E+ + GQGA+ +E + ++V V++ +T ERAFL L+G Sbjct: 2 NRVGQILHPEECMYAVGQGALGVEVRAKDQDILDMVGVLHDPETLLRCIAERAFLRHLEG 61 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD------- 284 C +A K LY G V + DG + + +G D Sbjct: 62 GCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQDTMQATIHVPAQHEDGPEDDPQLVGIT 121 Query: 285 -----------AINIGRDAAQYIRFISNKNVFNF 307 A N+G A + KN+ + Sbjct: 122 ARNIPRGPQLAAQNLGISLANLLLSKGAKNILDI 155 >gi|54310581|ref|YP_131601.1| hypothetical protein PBPRA3528 [Photobacterium profundum SS9] gi|46915024|emb|CAG21799.1| hypothetical protein PBPRA3528 [Photobacterium profundum SS9] Length = 104 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 41/97 (42%) Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269 ++ + + L+ +NH +T + CERA L G C+ I ++ +G ++ +V D Sbjct: 2 DDQRVRALLAPLNHHETATRIFCERAMNNRLQGGCQVPIGSYSELQGDQIWLRALVGEPD 61 Query: 270 GKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 G G D +G A+ + K + + Sbjct: 62 GSKMVRGEITGPAIDGEALGTQLAEQLLADGAKEILD 98 >gi|329945529|ref|ZP_08293267.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328528774|gb|EGF55723.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 149 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 8/141 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVH-------KIPPHNIVIIPLSTKGDRITNRTL 55 ++ R+GTR S LAL + + +L + ++ + T GD L Sbjct: 10 ERRLRLGTRGSRLALTQSGQVADALRQAAAAGARAPGCDNLELDLVTVRTDGDGDR-TPL 68 Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115 ++GG G+F + L+ GE+D VHS KD+PT+ ++GL++ PRED D + Sbjct: 69 RQLGGVGVFAARLRHALLDGEVDLVVHSFKDLPTQPVEGLEVICVPPREDPHDALCARDG 128 Query: 116 QSLKDLALHSVIGTSSLRRKA 136 +L L + +GT S RR A Sbjct: 129 LTLATLPDGARVGTGSPRRAA 149 >gi|306835115|ref|ZP_07468155.1| possible hydroxymethylbilane synthase [Corynebacterium accolens ATCC 49726] gi|304568972|gb|EFM44497.1| possible hydroxymethylbilane synthase [Corynebacterium accolens ATCC 49726] Length = 158 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 1/158 (0%) Query: 149 DFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH 208 RG I+TR++K+ + + A++LAYAG+ R E +I + E F P+P QGA+ IE Sbjct: 1 PLRGNIDTRMSKVTDGELDAVVLAYAGLLRGGYEDRASDIFDPELFMPAPAQGALAIEAV 60 Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS 268 A L V++ + T ++ A LA L+ C + +A + G L G V A Sbjct: 61 AGTEAAAALDAVVDEQATAAALAER-AVLARLEAGCTAPVAATSRWNGDQLTVRGGVFAL 119 Query: 269 DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 DG + +G +A +G + + ++ Sbjct: 120 DGSRQLTATASGTAAEAAELGARVSDELFAQGAADLLG 157 >gi|51241768|dbj|BAD36778.1| porphobilinogen deaminase [Homo sapiens] Length = 157 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 53/147 (36%), Gaps = 29/147 (19%) Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 + E+ + GQGA+ +E + +LV V++ +T ERAFL L+G C +A Sbjct: 3 HPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSVPVA 62 Query: 250 GFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------------------------NG 280 K LY G V + DG + + G Sbjct: 63 VHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLVGITARNIPRG 122 Query: 281 NRCDAINIGRDAAQYIRFISNKNVFNF 307 + A N+G A + KN+ + Sbjct: 123 PQLAAQNLGISLANLLLSKGAKNILDV 149 >gi|237833021|ref|XP_002365808.1| porphobilinogen deaminase, putative [Toxoplasma gondii ME49] gi|211963472|gb|EEA98667.1| porphobilinogen deaminase, putative [Toxoplasma gondii ME49] Length = 729 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 61/306 (19%), Positives = 98/306 (32%), Gaps = 93/306 (30%) Query: 91 LLKGLQISAYLPRED-IRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS--DISV 147 L + + + R D ++ K IGT SLRR+ALL + Sbjct: 405 LPEETEEAGRAARASHTEDDAGGVEGEARKADEGRPRIGTCSLRRQALLYALLPPSSFQL 464 Query: 148 IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-----------------------EKV 184 + RG ++TR++++ A LLA AG+KRL Sbjct: 465 MGLRGNVQTRMSRIEKGTLDATLLAAAGLKRLNLLSAMLAPSPSATPSPCPASSPNEASR 524 Query: 185 IKEI--------LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 E L + F P+ QG I ++ + L++ +N + CERAF Sbjct: 525 GTEPGGCVEAVLLPADVFVPAVCQGIIGVQCRSADTGILSLLRELNSPSSRGQALCERAF 584 Query: 237 LAELDGSCKSAI------------------------------------------------ 248 L LDGSC++ I Sbjct: 585 LRALDGSCRTPIAGIAEWRAVPAQGEAPRPQSQNGSDEPGVEREGEEGCAGSSVERREGR 644 Query: 249 -----AGF--AYCKGSTLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIR 297 G + + + L F G++ DGK R +A +GR A+ I+ Sbjct: 645 SEEGWGGHPDCFTEKTELRFCGVLATPDGKQLFREERTVRGVRTPEEAEALGRAVAEEIK 704 Query: 298 FISNKN 303 + + Sbjct: 705 KAAGAD 710 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 39/88 (44%), Positives = 58/88 (65%) Query: 24 RSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHS 83 S L ++ + I+P+ T GD+ + L ++GGKGLFT+E++ L+ G++D VHS Sbjct: 252 ASLLRVDSRLEYGELRIVPMQTTGDKELHLPLAQVGGKGLFTKELDLALLHGQVDVVVHS 311 Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFI 111 KD+PT+L +G +I AYLPRED RD I Sbjct: 312 LKDVPTELPEGTEIGAYLPREDPRDALI 339 Score = 41.7 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 14/27 (51%), Positives = 17/27 (62%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLM 28 EK P R+G+R SPLALA A + L Sbjct: 159 EKTPLRVGSRASPLALAQARQFVYRLA 185 >gi|169837036|ref|ZP_02870224.1| Porphobilinogen deaminase [candidate division TM7 single-cell isolate TM7a] Length = 119 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 2/114 (1%) Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E + + F P+PGQG +CI+ N+ K + L+++IN ++ ER F DG C Sbjct: 1 MSEYFDTDFFMPAPGQGILCIQCRENDNKIRHLLEIINDDEVTMMCEAEREFSKIFDGGC 60 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 + I + +G TL G+ +G + GN+ + I + A+ I+ Sbjct: 61 HTPIGCSSVIEGDTLKLKGM-FNDNGSRMLK-EVEGNKENPKEIAQKLAEEIKK 112 >gi|729693|sp|P40129|HEM3_ERWCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|41671|emb|CAA44890.1| hemC [Erwinia chrysanthemi] Length = 89 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 2/91 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H P + ++P+ T+G + + L ++GG Sbjct: 1 MVDTILRIATRQSPLALWQAHFVQQRLEACH--PGLRVELVPMVTRGXLLLDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91 KGLF +E+E L+ D AVHS KD+P + Sbjct: 59 KGLFVKELELALLENRADIAVHSMKDVPVEF 89 >gi|293194048|ref|ZP_06609930.1| hydroxymethylbilane synthase [Actinomyces odontolyticus F0309] gi|292819802|gb|EFF78811.1| hydroxymethylbilane synthase [Actinomyces odontolyticus F0309] Length = 166 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 9/154 (5%) Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH-VNNPKAQELVKVI 221 + A++LA AG++R+ + ++L+ P+P QGA+ IET ++P L+ + Sbjct: 3 GERLDAVVLALAGLRRIGLDAHATDVLHPAIMMPAPSQGALAIETRDEDDPLLHALLGTL 62 Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRN 279 NH T + + ERA L+ L C + + FA S L V++ DG+ + + Sbjct: 63 NHRPTALAASAERAVLSALGAGCAAPVGAFARVDEASSVLLLDARVMSVDGRERVKARGS 122 Query: 280 GNRCD------AINIGRDAAQYIRFISNKNVFNF 307 D A +G D A+ + V + Sbjct: 123 LALTDSVGLDEAARLGEDVARQLLAGGAAEVTDL 156 >gi|149452688|ref|XP_001516450.1| PREDICTED: similar to hydroxymethylbilane synthase [Ornithorhynchus anatinus] Length = 218 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 45/115 (39%), Positives = 61/115 (53%), Gaps = 4/115 (3%) Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDLALHSVIGTSSLR 133 +D VHS KD+PT L G I A RE D + H ++L L SV+GTSSLR Sbjct: 90 VDLVVHSLKDLPTVLPPGFTIGAVCKRESPYDAVVFHPKHVGKTLATLPEKSVVGTSSLR 149 Query: 134 RKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKVIKE 187 R A L R + RG + TRL KL+ + AI+LA AG++RL + + + Sbjct: 150 RAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQRLGWQSRLGQ 204 >gi|218673006|ref|ZP_03522675.1| porphobilinogen deaminase [Rhizobium etli GR56] Length = 111 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 45/108 (41%), Positives = 69/108 (63%) Query: 199 GQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST 258 QGAICIE+ V + +L+ +N T+D+V+CERAFLA LDGSC++ I G+A C+G Sbjct: 1 AQGAICIESRVGDTGIDDLLAAVNDAATFDTVSCERAFLAALDGSCRTPIGGYAVCEGDL 60 Query: 259 LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 + F G+++ DG+ H V+ +G+R DA +G A Q +R + F+ Sbjct: 61 IRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARAGSAFFD 108 >gi|294896302|ref|XP_002775489.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983] gi|239881712|gb|EER07305.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983] Length = 539 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 58/280 (20%), Positives = 101/280 (36%), Gaps = 53/280 (18%) Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96 + GD L ++ G+FT + L++G D VHS KD+P G Sbjct: 7 EVECHYREAPGDTNLKDPLWKMPETGVFTSFLRDGLMNGAFDLVVHSWKDLPLAEESGTT 66 Query: 97 ISAYLPREDIRDVFISHTAQSLKDLALHS--VIGTSSLRRK----------------ALL 138 + A LPR D RD+ + + + ++ +SS RR+ Sbjct: 67 VVATLPRADPRDLLLIRRDAIEEMTSEGGKLIVLSSSPRRQFNLTPFLESVVPGVTSVQF 126 Query: 139 LRWRSDISV-----IDFRGKIETRLNKLNNN---------KAHAILLAYAGIKRLKKEKV 184 R +I V + G ++TR+ KL + + H +++A A + R + Sbjct: 127 RDVRGNIQVQPMGSSPYEGLLQTRMRKLMDPTIHDESLGCRPHGLVVAKAAVDRFIRSTR 186 Query: 185 -----------------IKEILNIEDFPPSPGQGAICIETHV--NNPKAQELVKVINHED 225 +L + P + QGA+ IE +++V+ +N Sbjct: 187 EEFKESRQLVQGYISDCRCMVLPLSANPTAAAQGALGIEVSTAPEKEHVRKIVRSLNDRS 246 Query: 226 TWDSVNCERAFLAELDGSCKSAIAG--FAYCKGSTLYFYG 263 T+D+ + E+ L G C I G L+ G Sbjct: 247 TFDAASKEKELLNSYGGGCHQKIGCTILPRQYGDVLFLCG 286 >gi|325118217|emb|CBZ53768.1| putative porphobilinogen deaminase [Neospora caninum Liverpool] Length = 683 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 61/252 (24%), Positives = 92/252 (36%), Gaps = 76/252 (30%) Query: 126 VIGTSSLRRKALLLRWRSDISV--IDFRGKIETRLNKLNNNKAHAILLAYAGIKRL---- 179 + GT SLRR+ALL S + RG ++TR+ ++ K A LLA AG+KRL Sbjct: 411 IFGTCSLRRQALLHALLPPGSFHLMGLRGNVQTRMRRIEEGKLDATLLAAAGLKRLCLLP 470 Query: 180 ------------------------KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215 + V +L E F P+ QG + ++ + + Sbjct: 471 SLLSPSRDSGPLASPLGCVSTHARGRACVEAVLLPAEVFVPAVCQGVVGVQCRSADTRIL 530 Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG------------------- 256 L+ +N + CERAFL LDGSC++ IAG A +G Sbjct: 531 SLLHSLNSLSSRGQARCERAFLRALDGSCRTPIAGIAQWRGVTDRRQETTQPERKTPDER 590 Query: 257 -----------------------STLYFYGIVLASDGKIFHEVSR--NG--NRCDAINIG 289 + L F G++ DGK R G +A +G Sbjct: 591 TDRRDVKGGEEGWGGHPDCFTEKAELRFCGVLATPDGKHLFRHERAVQGVRTPEEAEELG 650 Query: 290 RDAAQYIRFISN 301 A+ I+ + Sbjct: 651 HAVAEEIKKAAG 662 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 38/73 (52%), Positives = 53/73 (72%) Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99 I+PL T GD + L ++GGKGLFT+E++ L++G++D VHS KD+PT+L G +I A Sbjct: 242 IVPLQTTGDSALHLPLAQLGGKGLFTKELDVALLAGQVDVVVHSMKDVPTELPPGTEIGA 301 Query: 100 YLPREDIRDVFIS 112 +LPRED RD FI Sbjct: 302 FLPREDPRDAFIY 314 Score = 39.0 bits (90), Expect = 0.88, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 14/24 (58%) Query: 5 PFRIGTRCSPLALAHAFETRSSLM 28 R+G+R SPLALA A E L Sbjct: 144 TLRVGSRASPLALAQAREFVYRLA 167 >gi|207347144|gb|EDZ73427.1| YDL205Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 144 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 6/135 (4%) Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ E I + + + + GQGA+ IE + K +++ I + ERA + Sbjct: 2 RMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCLSERALM 61 Query: 238 AELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVS----RNGNRCDAINIGRD 291 L+G C I + T L IV+ +G E + D++ G+ Sbjct: 62 RTLEGGCSVPIGVESKYNEETKKLLLKAIVVDVEGTEAVEDEIEMLIENVKEDSMACGKI 121 Query: 292 AAQYIRFISNKNVFN 306 A+ + K + + Sbjct: 122 LAERMIADGAKKILD 136 >gi|313896589|ref|ZP_07830138.1| porphobilinogen deaminase C-terminal domain protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312974774|gb|EFR40240.1| porphobilinogen deaminase C-terminal domain protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 120 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 1/113 (0%) Query: 194 FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY 253 P+ GQGA+ IE ++ + + + D + ERAFL ++G C+ + +A Sbjct: 1 MLPAVGQGALAIECRADDAEICAAIGFMCDADMTAAAAAERAFLGRVEGGCQIPVGVYAE 60 Query: 254 C-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 G LY ++ + DG +G A IG A+ + + + + Sbjct: 61 IGDGDMLYVDAMIASVDGMRVCRSRASGRPAQAAQIGVALAEELLDMGGREIL 113 >gi|255030292|ref|ZP_05302243.1| porphobilinogen deaminase [Listeria monocytogenes LO28] Length = 84 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 2/85 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGKG Sbjct: 2 KRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDM 87 LF E+E+ L ID AVHS KD+ Sbjct: 60 LFVSEVEQALSDEAIDFAVHSMKDV 84 >gi|23011609|ref|ZP_00051918.1| COG0181: Porphobilinogen deaminase [Magnetospirillum magnetotacticum MS-1] Length = 119 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 38/114 (33%), Positives = 56/114 (49%) Query: 192 EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGF 251 E+ P+ QGA+ IE + + L+ + T +++ ER LAELDGSC++ IA Sbjct: 2 EEMLPAVAQGALGIECRARDDAIRALLAPVACATTTTALDAERGLLAELDGSCRTPIAAL 61 Query: 252 AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 A +G L G++ DG V R G DA IGRDA ++ + F Sbjct: 62 ARIQGDRLSLDGLLFLPDGSRHWAVHREGATSDAAEIGRDAGAELKRAAGDVYF 115 >gi|294637951|ref|ZP_06716219.1| porphobilinogen deaminase protein [Edwardsiella tarda ATCC 23685] gi|291088912|gb|EFE21473.1| porphobilinogen deaminase protein [Edwardsiella tarda ATCC 23685] Length = 94 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 38/87 (43%) Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 +NHE T V+ ERA L+G C+ I +A G L+ +V DG + R Sbjct: 1 PLNHESTALRVSAERAMNMRLEGGCQVPIGSYAEIDGDQLWLRALVGRPDGSLIIRGERR 60 Query: 280 GNRCDAINIGRDAAQYIRFISNKNVFN 306 G A ++G D A + + + + Sbjct: 61 GPLHQAESMGIDLADELLARGARAILD 87 >gi|329944047|ref|ZP_08292313.1| Porphobilinogen deaminase domain protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328531093|gb|EGF57944.1| Porphobilinogen deaminase domain protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 206 Score = 119 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 25/169 (14%) Query: 164 NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH--VNNPKAQELVKVI 221 A++LA +G++RL E E+L++E P+P QGA+ +E + + Sbjct: 30 GDLDAVVLALSGLRRLGLEHCASEVLDLETMLPAPAQGALAVEARAGEGSAALARAAAAL 89 Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFH-- 274 + E T +V ERA +A L C + + +A+ G L +V + DG Sbjct: 90 DDEPTRLAVTAERALMARLGAGCAAPVGAWAHLSGGEQEQRVLALRAVVTSLDGGKEVGC 149 Query: 275 EVSRNGNRCD----------------AINIGRDAAQYIRFISNKNVFNF 307 E+S D A +G AA+ + V + Sbjct: 150 ELSAELPEADSGPDTYGNAVAQAVRAAEALGVRAAEVLLEDGAAEVVDL 198 >gi|70780272|gb|AAZ08387.1| porphobilinogen deaminase [Toxoplasma gondii] Length = 747 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 51/199 (25%), Positives = 78/199 (39%), Gaps = 34/199 (17%) Query: 91 LLKGLQISAYLPRED-IRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS--DISV 147 L + + + R D ++ K IGT SLRR+ALL + Sbjct: 408 LPEETEEAGRAARASHTEDDAGGVEGEARKGDEGRPRIGTCSLRRQALLYALLPPSSFQL 467 Query: 148 IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK-----------------------EKV 184 + RG ++TR++++ A LLA AG+KRL Sbjct: 468 MGLRGNVQTRMSRIEKGTLDATLLAAAGLKRLNLLSAMLAPSPSATPSPCPAPSPNETSR 527 Query: 185 IKEI--------LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 E L + F P+ QG I ++ + L++ +N + CERAF Sbjct: 528 GTEPGGCVEAVLLPADVFVPAVCQGIIGVQCRSADTGILSLLRELNSPSSRGQALCERAF 587 Query: 237 LAELDGSCKSAIAGFAYCK 255 L LDGSC++ IAG A + Sbjct: 588 LRALDGSCRTPIAGIAEWR 606 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 39/88 (44%), Positives = 58/88 (65%) Query: 24 RSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHS 83 S L ++ + I+P+ T GD+ + L ++GGKGLFT+E++ L+ G++D VHS Sbjct: 255 ASLLRVDSRLEYGELRIVPMQTTGDKELHLPLAQVGGKGLFTKELDLALLHGQVDVVVHS 314 Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFI 111 KD+PT+L +G +I AYLPRED RD I Sbjct: 315 LKDVPTELPEGTEIGAYLPREDPRDALI 342 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 5/60 (8%) Query: 249 AGFAYCKGSTL-YFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIRFISNKN 303 A G L F G++ DGK R +A +GR A+ I+ + + Sbjct: 669 GVLATPDGKQLLRFCGVLATPDGKQLFREERTVRGVRTPEEAEALGRAVAEEIKKAAGAD 728 Score = 42.1 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 14/27 (51%), Positives = 17/27 (62%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLM 28 EK P R+G+R SPLALA A + L Sbjct: 159 EKTPLRVGSRASPLALAQARQFVYRLA 185 >gi|167038282|ref|YP_001665860.1| porphobilinogen deaminase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|166857116|gb|ABY95524.1| Porphobilinogen deaminase [Thermoanaerobacter pseudethanolicus ATCC 33223] Length = 168 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 7/163 (4%) Query: 138 LLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPS 197 + SDI ++ RG + TRL K+ I+L+ AG+ RL E +I E + P+ Sbjct: 4 IQALMSDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGLESIITEYFPPDVVVPA 63 Query: 198 PGQGAICIETHVNNPKA-QELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-- 254 P QG + +E + QE I T+ + ER L +C+ +A Sbjct: 64 PCQGILAVEIAESFDNIFQEFYSYIVDRRTFFEASVERELLKAFGVNCRQPFGAYAQYRK 123 Query: 255 --KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 + + D + G + + + Sbjct: 124 EKDEEKINIKVVYQKED--KLLKSEVTGLIEETDKMIEKLIEE 164 >gi|221488268|gb|EEE26482.1| porphobilinogen deaminase, putative [Toxoplasma gondii GT1] Length = 174 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 5/119 (4%) Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 + F P+ QG I ++ + L++ +N + CERAFL LDGSC++ IA Sbjct: 37 PADVFVPAVCQGIIGVQCRSADTGILSLLRELNSPSSRGQALCERAFLRALDGSCRTPIA 96 Query: 250 GFAYCKGST-LYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIRFISNKN 303 G A + T L F G++ DGK R +A +GR A+ I+ + + Sbjct: 97 GIAEWRAKTELRFCGVLATPDGKQLFREERTVRGVRTPEEAEALGRAVAEEIKKAAGAD 155 >gi|77799154|gb|ABB03720.1| putative porphobilinogen deaminase [Sorghum bicolor] Length = 98 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 3/95 (3%) Query: 215 QELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIF 273 E + +NHEDT +V CER FLA LDG+C++ IA +AY F G++ + DG Sbjct: 1 MEYLSSLNHEDTRLAVACEREFLAVLDGNCRTPIAAYAYRDKDGNCSFRGLLASPDGSKV 60 Query: 274 HEVSRNGNR--CDAINIGRDAAQYIRFISNKNVFN 306 E +R+G D + +G+DA ++ + F+ Sbjct: 61 FETTRSGPYSFDDMVELGKDAGHELKAKAGPGFFD 95 >gi|256751190|ref|ZP_05492071.1| Porphobilinogen deaminase [Thermoanaerobacter ethanolicus CCSD1] gi|256749915|gb|EEU62938.1| Porphobilinogen deaminase [Thermoanaerobacter ethanolicus CCSD1] Length = 161 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 58/158 (36%), Gaps = 7/158 (4%) Query: 143 SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGA 202 SDI ++ RG + TRL K+ I+L+ AG+ RL E +I E + P+P QG Sbjct: 2 SDIQIVPVRGNVRTRLKKMEELNLDGIVLSAAGLHRLGLENIITEYFPPDVVVPAPCQGI 61 Query: 203 ICIETHVNNPKA-QELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC----KGS 257 + +E + QE I T+ + ER L +C+ +A Sbjct: 62 LAVEIAESFDNIFQEFYPYIVDRRTFFEASVERELLKVFGVNCRQPFGAYAQYRKEEDEE 121 Query: 258 TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 + + D + G + + + Sbjct: 122 KINIKVVYQKED--KLLKSEVTGLIEETDKMIEKLIEE 157 >gi|326772618|ref|ZP_08231902.1| hydroxymethylbilane synthase [Actinomyces viscosus C505] gi|326637250|gb|EGE38152.1| hydroxymethylbilane synthase [Actinomyces viscosus C505] Length = 140 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 14/134 (10%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDV-------------HKIPPHNIVIIPLSTKGDR 49 + R+GTR S LAL + + +LM I ++ + T GD Sbjct: 8 SRRLRLGTRGSRLALTQSGQVAEALMAAGGGGAAAAAGKASEGSGSLGIDLVTVRTDGDG 67 Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109 L ++GG G+F + L+ GE+D VHS KD+PT+ ++GL++ PRED RD Sbjct: 68 DR-TPLRQLGGVGVFAARLRHALLDGEVDLVVHSFKDLPTQPVEGLEVICVPPREDPRDA 126 Query: 110 FISHTAQSLKDLAL 123 + + +L DL Sbjct: 127 LCARDSLTLADLPE 140 >gi|467060|gb|AAA17244.1| hem3a [Mycobacterium leprae] Length = 134 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 9/121 (7%) Query: 193 DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252 P+P QGAI +E + + ++ ++ DT +V ER LAEL+ C + + A Sbjct: 2 QMVPAPAQGAIAVECRAGDSRLVAVLAALDDADTRAAVTAERVLLAELEAGCSAPVGAIA 61 Query: 253 YCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 L G V A DG S A +G A + + + Sbjct: 62 QVVESIDGEGRVFEELSLRGCVAALDGSDVIRASGISTSGRASELGLAVAVELFELGARE 121 Query: 304 V 304 + Sbjct: 122 L 122 >gi|213623045|ref|ZP_03375828.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 88 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 31/77 (40%) Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 V ERA L+G C+ I +A ++ +V A DG + R G+ A + Sbjct: 2 RVTAERAMNTRLEGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQM 61 Query: 289 GRDAAQYIRFISNKNVF 305 G A+ + + + Sbjct: 62 GISLAEELLENGARAIL 78 >gi|62467569|gb|AAX83934.1| Hem3p [Saccharomyces cerevisiae] Length = 97 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 6/99 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + IG R S LA+ + + + K P ++ + L T GD+I + L GG Sbjct: 1 MGPETLHIGGRKSKLAVIQSNHVLKLIEE--KYPDYDCKVFTLQTLGDQIQFKPLYSFGG 58 Query: 61 KGLFTEEIEKKLI----SGEIDCAVHSAKDMPTKLLKGL 95 K L+T+E+E L S ++D VHS KDMPT L +G Sbjct: 59 KALWTKELEDHLYHDDPSKKLDLIVHSLKDMPTLLPEGF 97 >gi|94468604|gb|ABF18151.1| hydroxymethylbilane synthase-like protein [Aedes aegypti] Length = 349 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 6/104 (5%) Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + EK I +++ + + GQGA+ +E N+ ++ + H +T + ER+FL Sbjct: 1 MGWEKRIDQVIEPSEILYAVGQGALAVECRSNDEYILNMLSKLCHLETQCKILVERSFLK 60 Query: 239 ELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEV 276 L G C + +A K + L G V + DGK Sbjct: 61 TLGGGCSAPVAVCTSLKRKHDSKSNYLNIQGAVWSLDGKTEIRA 104 >gi|113707391|gb|ABI36594.1| hydroxymethylbilane synthase [Homo sapiens] Length = 87 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 35/82 (42%) Query: 201 GAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY 260 GA+ +E + +LV V++ +T ERAFL L+G C +A K LY Sbjct: 1 GALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSVPVAVHTAMKDGQLY 60 Query: 261 FYGIVLASDGKIFHEVSRNGNR 282 G V + DG + + Sbjct: 61 LTGGVWSLDGSDSIQETMQATI 82 >gi|167949214|ref|ZP_02536288.1| porphobilinogen deaminase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 136 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 21/140 (15%) Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 AG+KRL E+ I + E P+ GQGAI IE ++ + L+ ++H DT V+ Sbjct: 6 PSAGLKRLGFEQRITAFIAPEQSLPAIGQGAIGIECRSDDAQVNALIAPLHHVDTAACVH 65 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFY-GIVLASDGKIFHEV----------SRNG 280 ERA L G S A V A+ G + G Sbjct: 66 AERAMNNRLMGG--SPCA--------DCRLRDAGVPATSGCVVWWARSTVARSCVGEAEG 115 Query: 281 NRCDAINIGRDAAQYIRFIS 300 +A ++G A+ + + Sbjct: 116 TPDEAESLGVGLAERLLELG 135 >gi|238488539|ref|XP_002375507.1| hypothetical protein AFLA_014870 [Aspergillus flavus NRRL3357] gi|220697895|gb|EED54235.1| hypothetical protein AFLA_014870 [Aspergillus flavus NRRL3357] Length = 90 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 2/83 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + P RIGTR S LA+ A R+ L + P + I L T GDR L G K Sbjct: 8 QPPLRIGTRRSNLAMVQAEGIRNCLQKI--APGRSFEIEALRTLGDRDQLTALYNFGAKS 65 Query: 63 LFTEEIEKKLISGEIDCAVHSAK 85 L+T E+E+KL +GE+D VH K Sbjct: 66 LWTTELEEKLNAGELDVIVHCLK 88 >gi|70931402|ref|XP_737390.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56512740|emb|CAH87819.1| hypothetical protein PC000109.00.0 [Plasmodium chabaudi chabaudi] Length = 169 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 5/131 (3%) Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + RL +K+ P+ QG I + ++ NNP+ +++K IN E + N ER Sbjct: 33 LSRLNIQKLNTN-----VMCPALCQGIIAVTSNKNNPEISQILKNINDEKSQIMANIERT 87 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 FL ++DGSC I G+ + + F I+ +G H++ + + I +AA+ Sbjct: 88 FLHKIDGSCTMPIGGYTKFSKNKIIFNAIINDINGLESHKIKVVRHLNNLDGIADEAAEK 147 Query: 296 IRFISNKNVFN 306 I+ FN Sbjct: 148 IKEKIGIEQFN 158 >gi|332187060|ref|ZP_08388801.1| porphobilinogen deaminase, C-terminal domain protein [Sphingomonas sp. S17] gi|332013070|gb|EGI55134.1| porphobilinogen deaminase, C-terminal domain protein [Sphingomonas sp. S17] Length = 107 Score = 92.9 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 2/102 (1%) Query: 203 ICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFY 262 + IET ++ A L+ I+H +T V ER+ LA L C S +A A G L Sbjct: 1 MGIETRADDAAATMLIGSIDHAETHACVMAERSLLAALQADCHSPVAALASLSGEMLTLR 60 Query: 263 GIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 +LA DG G +G A + + V Sbjct: 61 AELLAEDGSARVSGWVEGAL--GEELGPRLAIDLLDRAPPEV 100 >gi|73760286|dbj|BAE20060.1| hydroxymethylbilane synthase [Capra hircus] Length = 109 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 1/81 (1%) Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAY 173 ++L+ L SV+GTSSLRR A L R + + RG + TRL KL+ + AI+LA Sbjct: 29 GKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFRNIRGNLNTRLRKLDELQEFSAIILAA 88 Query: 174 AGIKRLKKEKVIKEILNIEDF 194 AG++R+ + + +IL+ E+ Sbjct: 89 AGLQRMGWQNRVGQILHPEEC 109 >gi|306835113|ref|ZP_07468154.1| porphobilinogen deaminase [Corynebacterium accolens ATCC 49726] gi|304569028|gb|EFM44552.1| porphobilinogen deaminase [Corynebacterium accolens ATCC 49726] Length = 89 Score = 90.2 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 6/91 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F+IGTR S LA A R L+D + + ++T GD TN E G G+FT Sbjct: 2 FQIGTRGSKLATTQAGHVRDWLIDA----GFDSELHIVTTAGD--TNMAPVERIGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96 + + + L GE D AVHS KD+PT + Sbjct: 56 QALREALCRGECDIAVHSFKDLPTAEDDRFR 86 >gi|2415549|emb|CAA04300.1| porphobilinogen deaminase [Campylobacter jejuni] Length = 88 Score = 86.7 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 1/89 (1%) Query: 203 ICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFY 262 + IE+ +++ K EL+K +N E+ + ER F+A L+G C+ I A G + Sbjct: 1 LGIES-IHDEKILELLKCLNDENALIETSIEREFIATLEGGCQVPIGINAELLGDEICVR 59 Query: 263 GIVLASDGKIFHEVSRNGNRCDAINIGRD 291 ++ DG + R + D G Sbjct: 60 AVLGLPDGSEILKDKRMIKKNDFKGFGES 88 >gi|307826363|ref|ZP_07656567.1| Porphobilinogen deaminase [Methylobacter tundripaludum SV96] gi|307732604|gb|EFO03477.1| Porphobilinogen deaminase [Methylobacter tundripaludum SV96] Length = 337 Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 36/57 (63%) Query: 153 KIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209 + TRL+KL++ + AI+LA AG+KRL + I + L+ P+ GQGAI IE + Sbjct: 1 NVNTRLSKLDSGEYDAIILASAGLKRLGMAERITQCLDTSVSLPAIGQGAIGIECRI 57 >gi|3172393|gb|AAC18578.1| porphobilinogen deaminase [Geobacillus stearothermophilus] Length = 57 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +G+R S LAL L + P + + TKGD+I N TL+++GGK Sbjct: 2 RKIIVGSRRSKLALTQTNWVIEQLKRLGA--PFEFEVKEIVTKGDKIINVTLSKVGGK 57 >gi|213583680|ref|ZP_03365506.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 69 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 22/59 (37%) Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 I +A ++ +V A DG + R G+ A +G A+ + + + Sbjct: 1 PIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENGARAIL 59 >gi|266622117|ref|ZP_06115052.1| putative porphobilinogen deaminase [Clostridium hathewayi DSM 13479] gi|288866173|gb|EFC98471.1| putative porphobilinogen deaminase [Clostridium hathewayi DSM 13479] Length = 121 Score = 76.7 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 3/111 (2%) Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E F P+ GQG + +E + + + E+ I ED + ER L LD C Sbjct: 14 HYFACEAFIPAGGQGILAVEGRIED-RICEMAVRIQDEDAKTCLMLERKILKLLDAGCHE 72 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + ++ +G + +G + D + V G + + AA+ +R Sbjct: 73 PVGVYSRIRGEEIEVFG-ISRRD-RETKRVYLTGGIGELDLLAERAAKGLR 121 >gi|225159193|ref|ZP_03725496.1| porphobilinogen deaminase [Opitutaceae bacterium TAV2] gi|224802195|gb|EEG20464.1| porphobilinogen deaminase [Opitutaceae bacterium TAV2] Length = 125 Score = 76.7 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 10/94 (10%) Query: 173 YAGIKRLK---KEKVIKEILNIEDFPPSPGQGAICIETHVNN-PKAQELVKVINHEDTWD 228 AG++RL + L E P+ GQ AI ++ + P+ + T Sbjct: 1 AAGLRRLGITGWPGLTFHPLGFEHMVPAVGQAAIALQCRSADAPRFAPHL----DARTAR 56 Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFY 262 +V ERAF L G C++A+ A TL+FY Sbjct: 57 AVTLERAFQTALGGGCQTALGVHAG--DDTLWFY 88 >gi|281415815|ref|ZP_06247557.1| hydroxymethylbilane synthase [Micrococcus luteus NCTC 2665] Length = 71 Score = 72.9 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 4/71 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA +L ++ + T+GD +T +L +GG G+F Sbjct: 3 PLRIGTRGSALATTQTSHVAEALTARS---GLAHELVVIRTEGD-VTTGSLASLGGTGVF 58 Query: 65 TEEIEKKLISG 75 + ++ G Sbjct: 59 ASALRAAVLDG 69 >gi|296803895|ref|XP_002842800.1| porphobilinogen deaminase [Arthroderma otae CBS 113480] gi|238846150|gb|EEQ35812.1| porphobilinogen deaminase [Arthroderma otae CBS 113480] Length = 282 Score = 69.8 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 62/212 (29%), Gaps = 46/212 (21%) Query: 86 DMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDI 145 D+ TKL +A V SL+ L ++I TS +R A L R + Sbjct: 93 DVSTKLPDSCDPAAIP-------VKAGLPYTSLQTLPEGAIIATSLVRPSAQLRRLFPTL 145 Query: 146 SVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICI 205 + RG +E+ + + A V QG Sbjct: 146 RFANVRGNVES------------LTIPQA------LGTVGSSTRGRPRARRRRHQGY--- 184 Query: 206 ETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIV 265 + + + L V+ L C + I + L IV Sbjct: 185 SSAGSADRLLALPSVLMC---------------ALRSGCNAPIGIETEWTATHLSIRAIV 229 Query: 266 LASDGKIFHEVSRNG---NRCDAINIGRDAAQ 294 ++ D E + + + ++ G+ A+ Sbjct: 230 VSLDISQSVEDAIDAMMHTKDESDAPGQALAR 261 >gi|167946284|ref|ZP_02533358.1| porphobilinogen deaminase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 51 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 20/44 (45%), Positives = 29/44 (65%) Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAY 100 GGKGLF +E+E+ ++ G D AVHS KD+P +L +GL + Sbjct: 3 RFGGKGLFVKELEQAMLEGRADIAVHSMKDVPAELPEGLHLPVI 46 >gi|238917296|ref|YP_002930813.1| hypothetical protein EUBELI_01371 [Eubacterium eligens ATCC 27750] gi|238872656|gb|ACR72366.1| Hypothetical protein EUBELI_01371 [Eubacterium eligens ATCC 27750] Length = 287 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 82/210 (39%), Gaps = 22/210 (10%) Query: 70 KKLISGEIDCAVHSAKDM------PTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 + LI ID + + + +L G+ IS + R D R V I KD+ Sbjct: 53 EALIDDNIDMVLVDMRMLVEMEKSGQQLDDGIVISGVIKRRDPRYVMIRRRGT--KDVVE 110 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA--GIKRL-K 180 ++V+ T S A++ ++ + I+ ++KL++ + A+ Y I RL Sbjct: 111 NAVVVTDSDENAAVICEMYDNVECV-VENNIKDCMSKLDSEECDAVFAFYDDIRIARLYN 169 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE-----RA 235 K +++ D P GQG CI T+ + + ++H T S + E R Sbjct: 170 GLKYKYTLMDFSDCVPPHGQGIYCILTNGKRSVIKHMFD-VSHRTTAMSFDIEEDIIRRL 228 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIV 265 + + SC + G + Y V Sbjct: 229 LMNDYVKSCN----AYVKISGDKIEVYADV 254 >gi|291080775|ref|ZP_06535168.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 47 Score = 66.3 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISG 75 P + ++P+ T+GD I + L ++GGKGLF +E+E L Sbjct: 5 PGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALRRK 46 >gi|58698960|ref|ZP_00373817.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila ananassae] gi|58534526|gb|EAL58668.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila ananassae] Length = 62 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57 +IGTR S LA+ A E + L+D P +I I+ + + GD+ N L E Sbjct: 13 VKIGTRGSKLAVVQALEAKQKLLD--SFPNLSIEIVKIKSSGDKYANANLAE 62 >gi|3668361|gb|AAC61857.1| porphobilinogen deaminase [Prosthecochloris vibrioformis] Length = 43 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 20/42 (47%), Positives = 30/42 (71%) Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEID 78 NI + + T GD + + L++IG GLFT++IEK L++GEID Sbjct: 2 NISLKLVKTTGDVLLDSPLSKIGDMGLFTKDIEKHLLAGEID 43 >gi|227485228|ref|ZP_03915544.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] gi|227236790|gb|EEI86805.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] Length = 32 Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 15/32 (46%) Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLA 267 L+G C+ I +A G +L+ +V A Sbjct: 1 MNTRLEGGCQVPIGSYAELDGDSLWLRALVGA 32 >gi|77176670|gb|ABA64453.1| hydroxymethylbilane synthase [Sus scrofa] Length = 33 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 17/33 (51%), Positives = 21/33 (63%) Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGL 95 LFT+E+E L E+D VHS KD+PT L G Sbjct: 1 LFTKELEHALERNEVDLVVHSLKDLPTVLPPGF 33 >gi|301102801|ref|XP_002900487.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262101750|gb|EEY59802.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 96 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 19/48 (39%) Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 + A TL VL+ DGK + +G R +G+ A+ Sbjct: 1 MGVSATLDEDTLTLNATVLSRDGKESVHETISGPRTQCEELGKQLAER 48 >gi|209738608|gb|ACI70173.1| Porphobilinogen deaminase [Salmo salar] gi|221220784|gb|ACM09053.1| Porphobilinogen deaminase [Salmo salar] Length = 55 Score = 51.7 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPL 43 + RIGTR S LA L ++ P +I I+ + Sbjct: 16 SRVIRIGTRNSQLARIQTDSVAEKLKGLY--PDVHIEIVGI 54 >gi|289449787|ref|YP_003475693.1| putative porphobilinogen deaminase, dipyromethane cofactor binding domain-containing protein [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184334|gb|ADC90759.1| putative porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 946 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 90/270 (33%), Gaps = 47/270 (17%) Query: 4 KPFRIGTRCSPL----AL-AH-----AFETRSSLMDVHKIPPHNIVIIPLSTKG-DRITN 52 +P R+ T PL A+ A S L + + G DR + Sbjct: 117 RPLRLNTNG-PLVRVGAIPWQIAVDRAEWVVSRLRRA----GLPFHLTQVPVSGFDRHSI 171 Query: 53 RTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS 112 + E++ L++ +I+ V + ++P KL G++++A + Sbjct: 172 INKEDYYASPAQVEKVFDALLNRQIEIGVIALPELPQKLPAGIRVAAISEVVAAEYALV- 230 Query: 113 HTAQSLKDLALHSV----IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA 168 SL D + + SL R+ + + + E L L+ A Sbjct: 231 ----SLSDHPAGEHDFIGVYSFSLARQLRSEKLGAHYEQRPY--NFEQALTCLHEGVWGA 284 Query: 169 ILLAYAGIKRLKKEKVIK-EILNIEDFPPSPGQGAICI-ETHVNNPKAQELVKVINHEDT 226 + A + E+L+ + P GQGA+ + + + A + +++ +T Sbjct: 285 CAIPLADLIFDGCSSEYSVEVLSKQRVVPPAGQGAVAVLVSDCEDELAAAVFSFLHNVET 344 Query: 227 ----WDSVNC--------ERAFLAELDGSC 244 + ERA GSC Sbjct: 345 EKIYRLEIEIANLVSDRKERA------GSC 368 >gi|291546287|emb|CBL19395.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain [Ruminococcus sp. SR1/5] Length = 40 Score = 44.8 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 14/28 (50%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLM 28 M++ IG+R S LA+ + R + Sbjct: 1 MKRDKIVIGSRESKLAVLQSEMVRDYIK 28 >gi|90580517|ref|ZP_01236323.1| hypothetical protein VAS14_09065 [Vibrio angustum S14] gi|90438426|gb|EAS63611.1| hypothetical protein VAS14_09065 [Vibrio angustum S14] Length = 1030 Score = 43.2 bits (101), Expect = 0.054, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 42/112 (37%), Gaps = 2/112 (1%) Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + +G +D + D+P+ GL L V S + L+DL Sbjct: 323 KSLRQAYTNGVLDI-LTVVPDVPSNQDLGLFSQPILKSPFAIAVSDSKHYEKLQDLNGKR 381 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 + S+ +++ I ++ + ++ L ++ A + A A + Sbjct: 382 LALLSNWPIISVIKEKYPLIDIVTYS-HVDEALRAVSKGDVDAFIDAEAVLS 432 >gi|300290|gb|AAC60602.1| porphobilinogen deaminase [Homo sapiens] Length = 38 Score = 42.8 bits (100), Expect = 0.065, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Query: 152 GKIETRLNKLNNN-KAHAILLAYAGIKRLKKEKVIKE 187 G + TRL KL+ + AI+LA AG++R+ + + Sbjct: 2 GNLNTRLRKLDEQQEFSAIILATAGLQRMGWHNRVGQ 38 >gi|148840388|gb|ABR14625.1| hydroxymethylbilane synthase [Felis catus] Length = 31 Score = 42.1 bits (98), Expect = 0.10, Method: Composition-based stats. Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 2/33 (6%) Query: 19 HAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT 51 + L ++ P I+ +ST GD+I Sbjct: 1 QTDSVVAVLKALY--PGLQFEIVAMSTTGDKIL 31 >gi|4469314|emb|CAB38454.1| hydroxymethylbilane synthase [Rattus norvegicus] Length = 42 Score = 40.1 bits (93), Expect = 0.46, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 11/24 (45%) Query: 4 KPFRIGTRCSPLALAHAFETRSSL 27 + R+GTR S LA + L Sbjct: 19 RVIRVGTRKSQLARIQTDTVVAML 42 >gi|169841475|ref|ZP_02874588.1| hypothetical protein cdivTM_30268 [candidate division TM7 single-cell isolate TM7a] Length = 22 Score = 39.8 bits (92), Expect = 0.60, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 12/21 (57%) Query: 1 MEKKPFRIGTRCSPLALAHAF 21 M+ IGTR S LALA A Sbjct: 1 MKSNKIIIGTRGSILALAQAE 21 >gi|34391573|gb|AAN46745.1| hydroxymethylbilane synthase [Sus scrofa] Length = 37 Score = 39.4 bits (91), Expect = 0.72, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 12/24 (50%) Query: 4 KPFRIGTRCSPLALAHAFETRSSL 27 + R+GTR S LA ++L Sbjct: 14 RVIRVGTRKSQLARIQTDSVVATL 37 >gi|168705561|ref|ZP_02737838.1| hypothetical protein GobsU_38873 [Gemmata obscuriglobus UQM 2246] Length = 443 Score = 39.0 bits (90), Expect = 0.90, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 37/105 (35%), Gaps = 19/105 (18%) Query: 210 NNPKAQELV-KVINHEDTWDSV---NCERAFLAELDGSCKSAIAGFAY-----CKGSTLY 260 ++ + L+ ++ T V E+A L+ ++ + + Sbjct: 168 DDAGVKALIEAKLDAAKTATRVSAFKAEKA----LE---SVPVSAEVRQKLEAVADTQVK 220 Query: 261 FYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 G + + ++G+ AI IG+ + +++K +F Sbjct: 221 ARGRIARP---TALLIDKSGSMSQAIEIGKRLGALLAAVADKGLF 262 >gi|120434987|ref|YP_860673.1| uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase [Gramella forsetii KT0803] gi|117577137|emb|CAL65606.1| uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase [Gramella forsetii KT0803] Length = 242 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 45/131 (34%), Gaps = 1/131 (0%) Query: 102 PREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 E + + +++ L+ G + + + L R +I V+ G L + Sbjct: 76 ESEIPTFLNAAKDGKNIGLLSEAGCPGVADPGAEIVKLAHRYNIQVVPLIGPSSILLAMM 135 Query: 162 NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221 + + + G + K+ EI +E Q I IET N K E + Sbjct: 136 ASG-MNGQSFTFHGYLPIDKKDRKHEIKQLERISTEKNQAQIFIETPYRNMKFLEDLIQN 194 Query: 222 NHEDTWDSVNC 232 H T V C Sbjct: 195 LHPTTRICVAC 205 >gi|229491101|ref|ZP_04384930.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229321988|gb|EEN87780.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length = 693 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 16/139 (11%) Query: 108 DVFISHTAQSLKDLALHSVIGTSSLRRKAL-LLRWRSDISVIDFRGKIETRLNKLNNNKA 166 D + +L LA ++++ SS A L R + + L A Sbjct: 446 DHSSWRRSHTL--LAQYTLMNDSSAEEIAKSLAALRHAGEHKLIEDTV---RHLLRVGPA 500 Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE-- 224 A+ A AG+ RL+ + + + +ET + A+ ++ +N Sbjct: 501 TAVR-AAAGVVRLELGTRTSLHAD----LQTISSVSDVLETDWADTHARWILARLNDTGD 555 Query: 225 -DTWD--SVNCERAFLAEL 240 T + + E A L L Sbjct: 556 LATRLQPTFSLEHALLKVL 574 >gi|169841914|ref|ZP_02875019.1| hypothetical protein cdivTM_32425 [candidate division TM7 single-cell isolate TM7a] Length = 30 Score = 38.6 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 17/29 (58%) Query: 72 LISGEIDCAVHSAKDMPTKLLKGLQISAY 100 ++ +ID AVHS KDMP +GL + Sbjct: 1 MLENKIDLAVHSLKDMPQNTPEGLLNVCF 29 >gi|320534143|ref|ZP_08034681.1| hypothetical protein HMPREF9057_02577 [Actinomyces sp. oral taxon 171 str. F0337] gi|320133642|gb|EFW26052.1| hypothetical protein HMPREF9057_02577 [Actinomyces sp. oral taxon 171 str. F0337] Length = 42 Score = 38.2 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 2 EKKPFRIGTRCSPLALAHAFET 23 E + R+GTR S LAL + + Sbjct: 7 ESRRLRLGTRGSRLALTQSGQV 28 >gi|289809520|ref|ZP_06540149.1| hypothetical protein Salmonellaentericaenterica_35847 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 23 Score = 37.8 bits (87), Expect = 2.0, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 15/22 (68%) Query: 55 LTEIGGKGLFTEEIEKKLISGE 76 L ++GGKGLF +E+E L+ Sbjct: 1 LAKVGGKGLFVKELEIALLEKR 22 >gi|242211549|ref|XP_002471612.1| predicted protein [Postia placenta Mad-698-R] gi|220729288|gb|EED83165.1| predicted protein [Postia placenta Mad-698-R] Length = 1026 Score = 37.4 bits (86), Expect = 2.7, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 42/115 (36%), Gaps = 18/115 (15%) Query: 5 PFRIGTRCSPLALAHA--FETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRT------L 55 P IG R S ++L + +M+ + + +TK ++ L Sbjct: 852 PIPIG-RGSKVSLYQCLDAFVKEEVMEKSDAWNCPHCKALRKATKNLSLSRLPPVLLIHL 910 Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAK---DMPTKLLKGLQISAYLPREDIR 107 KG FT++IE +D + S MP L G+ + R+D R Sbjct: 911 KRFSSKGHFTDKIETF-----VDYPIRSLDLTNYMPPPLPPGVDMGLQPSRDDPR 960 >gi|291541313|emb|CBL14424.1| L-serine ammonia-lyase [Roseburia intestinalis XB6B4] Length = 294 Score = 37.4 bits (86), Expect = 2.7, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Query: 230 VNCERAFLAELDGSCKSAIA-GFAYCKGSTLYFYG 263 V ERAFLA G C++ I A G ++ G Sbjct: 152 VIAERAFLAGAAGGCQAEIGSASAMAAGGVVHLSG 186 >gi|291534472|emb|CBL07584.1| L-serine ammonia-lyase [Roseburia intestinalis M50/1] Length = 294 Score = 37.4 bits (86), Expect = 2.7, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Query: 230 VNCERAFLAELDGSCKSAIA-GFAYCKGSTLYFYG 263 V ERAFLA G C++ I A G ++ G Sbjct: 152 VIAERAFLAGAAGGCQAEIGSASAMAAGGVVHLSG 186 >gi|240145235|ref|ZP_04743836.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit [Roseburia intestinalis L1-82] gi|257202699|gb|EEV00984.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit [Roseburia intestinalis L1-82] Length = 294 Score = 37.4 bits (86), Expect = 2.9, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Query: 230 VNCERAFLAELDGSCKSAIA-GFAYCKGSTLYFYG 263 V ERAFLA G C++ I A G ++ G Sbjct: 152 VIAERAFLAGAAGGCQAEIGSASAMAAGGVVHLSG 186 >gi|260907292|ref|ZP_05915614.1| hypothetical protein BlinB_18293 [Brevibacterium linens BL2] Length = 321 Score = 37.1 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 17/48 (35%), Gaps = 1/48 (2%) Query: 195 PPSPGQGAICIETHVN-NPKAQELVKVINHEDTWDSVNCERAFLAELD 241 P +G I E + + + ++H + ER L EL Sbjct: 16 LPENSRGDIAAEIRATIDDMVEARLDGLDHPADEQTAAAERDVLEELG 63 >gi|317406131|gb|EFV86388.1| glutamine-binding periplasmic protein [Achromobacter xylosoxidans C54] Length = 247 Score = 37.1 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 55/168 (32%), Gaps = 27/168 (16%) Query: 18 AHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE-IGGKGLFT----EEIEKKL 72 AHA ET ++ D PP V T D L +G K + + + L Sbjct: 23 AHAQETIRAVTDA-TFPPMEFVKDGKRTGFDIELVEALAAAMGKKVEWIDIDFKGLIPAL 81 Query: 73 ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV-----FISHTA--QSLKDLALHS 125 +G D AV + P + S + D ++LKDL Sbjct: 82 QAGRADIAVSAIYITP-------ERSKVVDFTDPYYAGGLVVLTKKDGPVKTLKDLDGRK 134 Query: 126 V---IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAIL 170 V +GT S+ L + ++ + N + +A A + Sbjct: 135 VSVQVGTKSV---NYLKEHYPSVQRVEVEKN-QEMFNLVQIGRADAAV 178 >gi|262283718|ref|ZP_06061482.1| ribose ABC transporter ribose-binding protein [Streptococcus sp. 2_1_36FAA] gi|262260564|gb|EEY79266.1| ribose ABC transporter ribose-binding protein [Streptococcus sp. 2_1_36FAA] Length = 322 Score = 37.1 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 8/66 (12%) Query: 245 KSAIAGFAYCKGS----TLYFYGIVLASDGKIFHEVS--RNGNRCD-AINIGRDAAQYI- 296 ++AI A K + L YG+ + D K F + G I +GR AQ I Sbjct: 230 RAAIGALAAIKNNGLNRKLSIYGVDGSPDIKNFLATTNDIEGTVAQSPIQMGRKVAQVIE 289 Query: 297 RFISNK 302 K Sbjct: 290 LMQEGK 295 >gi|331697403|ref|YP_004333642.1| glycosyl transferase family 51 [Pseudonocardia dioxanivorans CB1190] gi|326952092|gb|AEA25789.1| glycosyl transferase family 51 [Pseudonocardia dioxanivorans CB1190] Length = 711 Score = 36.7 bits (84), Expect = 4.6, Method: Composition-based stats. Identities = 13/100 (13%), Positives = 39/100 (39%), Gaps = 18/100 (18%) Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI---AGFAYCKGSTL----YF 261 + +A + +N D+ ++ E+ + + + +A + + Sbjct: 445 ADAARAAGITSPLNDPDSRLALG-----NKEV-----TPVELASAYATIADGGVYHVPHL 494 Query: 262 YGIVLASDGKIFHEV-SRNGNRCDAINIGRDAAQYIRFIS 300 V+ SDG++ ++ S +G R + R+ + + ++ Sbjct: 495 ISKVVTSDGRVLYQSRSSDGERRFPEQVARNVTEAMLDVA 534 >gi|313214761|emb|CBY41030.1| unnamed protein product [Oikopleura dioica] Length = 166 Score = 36.3 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 33/74 (44%), Gaps = 8/74 (10%) Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +G+ RR + +L+ R ++++D G+ + +K LL + G+ R++ Sbjct: 37 LPKGLAMGSDEPRRGSQILQRR--MTIMDVSGQPKEENHK------GGQLLWFRGLNRIQ 88 Query: 181 KEKVIKEILNIEDF 194 ++ + + Sbjct: 89 QQIRVVHAFRSSMY 102 >gi|313225952|emb|CBY21095.1| unnamed protein product [Oikopleura dioica] Length = 1173 Score = 36.3 bits (83), Expect = 5.8, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 33/74 (44%), Gaps = 8/74 (10%) Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +G+ RR + +L+ R ++++D G+ + +K LL + G+ R++ Sbjct: 1044 LPKGLAMGSDEPRRGSQILQRR--MTIMDVSGQPKEENHK------GGQLLWFRGLNRIQ 1095 Query: 181 KEKVIKEILNIEDF 194 ++ + + Sbjct: 1096 QQIRVVHAFRSSMY 1109 >gi|116622078|ref|YP_824234.1| hypothetical protein Acid_2965 [Candidatus Solibacter usitatus Ellin6076] gi|116225240|gb|ABJ83949.1| protein of unknown function UPF0118 [Candidatus Solibacter usitatus Ellin6076] Length = 612 Score = 36.3 bits (83), Expect = 6.1, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 45/114 (39%), Gaps = 14/114 (12%) Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EI +++ + + H+A P + +++ +PRE+ D+F + L Sbjct: 488 ADEIAAAMLAQLLSASGHAAIPFPVDFARDEKLAIVVPREN--DLFC------ISALPPF 539 Query: 125 SVIGTSSLRRKALLLRWRSDISVID----FRGKIETRLNKLNNNKAHAILLAYA 174 + G +L R L +I F G E L + ++ ++ + A Sbjct: 540 AFAGAITLVR--QLKLRFPRTRIIAGVWGFSGNTERALQRFQQSQPDYLVTSLA 591 >gi|308809988|ref|XP_003082303.1| putative dehydratase/deaminase (ISS) [Ostreococcus tauri] gi|116060771|emb|CAL57249.1| putative dehydratase/deaminase (ISS) [Ostreococcus tauri] Length = 536 Score = 36.3 bits (83), Expect = 6.5, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 60/169 (35%), Gaps = 30/169 (17%) Query: 65 TEEIEKK---------LISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF----- 110 T+E++ L + D A+ S ++ +L + + S YL RED++ VF Sbjct: 30 TKELDVAREAWYVRAILTADVYDVAIESPCEIAPRLSERIGASIYLKREDLQPVFSFKIR 89 Query: 111 -ISHTAQSLKDLALHSVIGTSSLRRKALLLRW----RSDISVIDFRGKIETRLNKLN--- 162 + + L + + TSS A + R + + Sbjct: 90 GAYNKMKQLSEEERARGVITSSAGNHAQGVAMSGKARVQGDHRHAGDDARDQGGAVRRLG 149 Query: 163 -----NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206 + A AYA K+ KE+ + I +D GQG + +E Sbjct: 150 GEVVLSGNYDAT-QAYA--KQRSKEEGLTYIPPFDDPFVIAGQGTVGVE 195 >gi|332290659|ref|YP_004429268.1| Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase [Krokinobacter diaphorus 4H-3-7-5] gi|332168745|gb|AEE18000.1| Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase [Krokinobacter diaphorus 4H-3-7-5] Length = 241 Score = 35.9 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 1/119 (0%) Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173 +S+ L+ V G + + + + + I V+ G + +++ + A+ Sbjct: 87 QGESVGLLSEAGVPGVADPGAEVVKIAHQKGIQVVPLVGPSSILMAMMSSG-MNGQNFAF 145 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 G + ++ +E+ +E GQ + IET N K E + H DT V C Sbjct: 146 NGYLPIDAQQRKQELKRLERLSSEQGQTQLFIETPYRNNKMLEDICNTVHPDTQVCVAC 204 >gi|239820200|ref|YP_002947385.1| Glucan 1,4-alpha-glucosidase [Variovorax paradoxus S110] gi|239805053|gb|ACS22119.1| Glucan 1,4-alpha-glucosidase [Variovorax paradoxus S110] Length = 463 Score = 35.9 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 28/109 (25%), Gaps = 7/109 (6%) Query: 139 LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG-IKRLKKEKVIKEILNI--EDFP 195 R R R A LLA A + R + ++ + + Sbjct: 168 RWNRPQHDGAPLRALALLRWA--AGGHLDAPLLAEAAELIRFDLDFTLRRWREPSYDIWE 225 Query: 196 PSPGQGAICIETHVNNPKAQE-LVKVINHEDTWDSVNCE-RAFLAELDG 242 GQ + ++ + E RA L LDG Sbjct: 226 EELGQHYYTLRVAGAALAEGAAWLEGLGDAAQAQRCREESRAVLRLLDG 274 >gi|145300111|ref|YP_001142952.1| LysR family transcriptional regulator [Aeromonas salmonicida subsp. salmonicida A449] gi|142852883|gb|ABO91204.1| transcriptional regulator, LysR-family [Aeromonas salmonicida subsp. salmonicida A449] Length = 303 Score = 35.9 bits (82), Expect = 7.9, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 40/120 (33%), Gaps = 19/120 (15%) Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL---KKE 182 V+ S LR + ++S+ + + L + + A +L RL Sbjct: 102 VLHPSVLRLIHDFRQAWPEVSLHPIENSMPNLVRDLMSEELDAAIL------RLPCSSSS 155 Query: 183 KVIKEILNIEDFP-------PSPGQGAICIETHVNNPKA---QELVKVINHEDTWDSVNC 232 + +++ E+ P GAI IE +P +EL ++ T Sbjct: 156 ALTHHLIDEEEMLIALPPHHPLASTGAIAIEALAQDPFILFPRELGPGLHDAITQRCQRA 215 >gi|322386642|ref|ZP_08060267.1| ribose ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus cristatus ATCC 51100] gi|321269315|gb|EFX52250.1| ribose ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus cristatus ATCC 51100] Length = 328 Score = 35.9 bits (82), Expect = 8.3, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 7/59 (11%) Query: 245 KSAIAGFAYCKG----STLYFYGIVLASDGKIFHEVS--RNGNRCD-AINIGRDAAQYI 296 ++AI A K +Y YG+ + D K F + G I +GR A+ I Sbjct: 236 RAAIGALAAIKDQGVAEKIYIYGVDGSPDIKNFLANTNDIQGTVAQSPIQMGRKVAEVI 294 >gi|269791882|ref|YP_003316786.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099517|gb|ACZ18504.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit [Thermanaerovibrio acidaminovorans DSM 6589] Length = 290 Score = 35.9 bits (82), Expect = 8.3, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 48/148 (32%), Gaps = 13/148 (8%) Query: 102 PREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 R RDV L+++ + R ++ G+ + Sbjct: 27 ERGLPRDVIAGRMLDRLREMKSSVLSVEQRPPRG----------RLVGGEGEALEAYRRS 76 Query: 162 N---NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV 218 + A + A + + + + G + + +N+P +EL+ Sbjct: 77 QGALSGDLVATACSMAMKVAVGNAAMRRIVACPTAGSCGIVPGVLGAYSRLNDPSEEELL 136 Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKS 246 K + SV +RA LA +G C++ Sbjct: 137 KALIVAGAVGSVIAQRATLAGAEGGCQA 164 >gi|332358396|gb|EGJ36221.1| ribose ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK49] Length = 328 Score = 35.9 bits (82), Expect = 8.4, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 24/66 (36%), Gaps = 8/66 (12%) Query: 245 KSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVS--RNGNRCD-AINIGRDAAQYI- 296 ++AI A K + YG+ + D K F + G I +GR AQ I Sbjct: 236 RAAIGALAAIKNQGLDKRISIYGVDGSPDIKNFLATTSDIEGTVAQSPIQMGRKVAQVIE 295 Query: 297 RFISNK 302 K Sbjct: 296 LMQEGK 301 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.314 0.164 0.502 Lambda K H 0.267 0.0504 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,670,811,018 Number of Sequences: 14124377 Number of extensions: 317217335 Number of successful extensions: 838687 Number of sequences better than 10.0: 2345 Number of HSP's better than 10.0 without gapping: 4417 Number of HSP's successfully gapped in prelim test: 138 Number of HSP's that attempted gapping in prelim test: 826137 Number of HSP's gapped (non-prelim): 4769 length of query: 307 length of database: 4,842,793,630 effective HSP length: 138 effective length of query: 169 effective length of database: 2,893,629,604 effective search space: 489023403076 effective search space used: 489023403076 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 81 (35.5 bits)