BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254781037|ref|YP_003065450.1| porphobilinogen deaminase [Candidatus Liberibacter asiaticus str. psy62] (307 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|90414241|ref|ZP_01222221.1| porphobilinogen deaminase [Photobacterium profundum 3TCK] gi|90324688|gb|EAS41229.1| porphobilinogen deaminase [Photobacterium profundum 3TCK] Length = 341 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 108/306 (35%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M KP RI TR SPLA+ A ++ L H P + ++P+ TKGD I + L ++GG Sbjct: 32 MTDKPIRIATRKSPLAMWQAEFVQAELEKAH--PGLVVELVPMVTKGDIILDTPLAKVGG 89 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+T S+ + Sbjct: 90 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNTYNSIAE 149 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+ RL+ Sbjct: 150 LPAGSIVGTSSLRRQCQLRAQRPDLIINDLRGNVNTRLRKLDEGQYDAIILACAGLMRLE 209 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ + E+ P+ GQGA+ IE +++ + + L+ +NH +T + CERA L Sbjct: 210 MHDRIRSAIEPEESLPAVGQGAVGIECRLDDHRVRALLATLNHPETATRIFCERAMNNHL 269 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I ++ +G ++ +V DG G D +G A+ + Sbjct: 270 QGGCQVPIGSYSELQGDQIWLRALVGEPDGSKMVRGEITGAAIDGEALGTQLAEQLLADG 329 Query: 301 NKNVFN 306 K + + Sbjct: 330 AKEILD 335 >gi|209693832|ref|YP_002261760.1| porphobilinogen deaminase [Aliivibrio salmonicida LFI1238] gi|226706282|sp|B6EPK1|HEM3_ALISL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|208007783|emb|CAQ77905.1| porphobilinogen deaminase HemC [Aliivibrio salmonicida LFI1238] Length = 311 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 110/307 (35%), Positives = 168/307 (54%), Gaps = 3/307 (0%) Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M ++ P RI TR SPLAL A + +L H P + ++ + TKGD I + L +IG Sbjct: 1 MSQQLPVRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E ++ G D AVHS KD+P + +GL + R D RD F+S+T ++ Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVEFPEGLGLVTICERGDPRDAFVSNTYNNID 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L + +GT SLRR+ L +R D+ + + RG + TRL KL++ AI+LA AG+ RL Sbjct: 119 ELPQGATVGTCSLRRQCQLKEYRPDLIIKELRGNVGTRLQKLDDGNYDAIILACAGLIRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E IK + E P+ GQGA+ IET +N+ + + L+ +NH +T V CERA Sbjct: 179 GLEDRIKSSIEPEQSLPAVGQGAVGIETRLNDDRIRALLAPLNHPETAHRVLCERAMNNR 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I ++ G ++ +V DG I G DA +G A+ + Sbjct: 239 LEGGCQVPIGSYSLIDGDQIWLRALVGEPDGSIMVRGETTGPVSDAEELGTKLAEQLLND 298 Query: 300 SNKNVFN 306 K++ + Sbjct: 299 GAKDILD 305 >gi|90581042|ref|ZP_01236842.1| porphobilinogen deaminase [Vibrio angustum S14] gi|90437738|gb|EAS62929.1| porphobilinogen deaminase [Vibrio angustum S14] Length = 310 Score = 295 bits (755), Expect = 5e-78, Method: Composition-based stats. Identities = 106/306 (34%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +P RI TR SPLA+ A ++ L H P + ++P+ TKGD I + L ++GG Sbjct: 1 MSNQPIRIATRKSPLAMWQAEFVKAELEQAH--PGIIVELVPMITKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ ++ + Sbjct: 59 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNKYNNIDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ V D RG + TRL K++ + AI+LA AG+KRLK Sbjct: 119 LPQGAIVGTSSLRRQCQLRAQRPDLIVNDLRGNVNTRLRKMDEGQYDAIILACAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE +++ + ++L+ ++ + T V CERA L Sbjct: 179 MEDRIRSEIAPEVSLPAVGQGAVGIECRLDDTRVRQLLAALSDQATTTRVLCERAMNNYL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ +V DG G A +G A+ + Sbjct: 239 QGGCQVPIGSYAELEGDQIWLRALVGEPDGSKIVRAEIRGPIEQAEQLGETLAEQLLNDG 298 Query: 301 NKNVFN 306 +++ + Sbjct: 299 ARDILD 304 >gi|330444901|ref|ZP_08308556.1| porphobilinogen deaminase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489211|dbj|GAA03053.1| porphobilinogen deaminase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 310 Score = 295 bits (754), Expect = 6e-78, Method: Composition-based stats. Identities = 108/306 (35%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +P RI TR SPLA+ A ++ L H P + ++P+ TKGD I + L ++GG Sbjct: 1 MTSQPIRIATRKSPLAMWQAEFVKAELEQAH--PGIVVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ ++ + Sbjct: 59 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNKYNNIDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ + R D+ V D RG + TRL KL++ + AI+LA AG+KRLK Sbjct: 119 LPQGAIVGTSSLRRQCQIRAQRPDLIVNDLRGNVNTRLRKLDDGEYDAIILACAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ + E P+ GQGA+ IE +++ + ++L+ +NH+ T V CERA L Sbjct: 179 MDDRIRSEIAPETSLPAVGQGAVGIECRLDDTRVRQLLDALNHQPTATRVLCERAMNNRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ +V DG G A +G A + Sbjct: 239 QGGCQVPIGSYALLEGDEIWLRALVGEPDGSKIVRAEIRGPIAQAEQLGTTLADQLLADG 298 Query: 301 NKNVFN 306 K++ + Sbjct: 299 AKDILD 304 >gi|157368427|ref|YP_001476416.1| porphobilinogen deaminase [Serratia proteamaculans 568] gi|167008819|sp|A8G848|HEM3_SERP5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157320191|gb|ABV39288.1| porphobilinogen deaminase [Serratia proteamaculans 568] Length = 313 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 117/305 (38%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQQRLMANH--PGLQVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P GL + R+D RD F+S+ SL Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPVDFPAGLGLVTICERDDPRDAFVSNRFTSLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ V D RG + TRL+KL+N AI+LA AG+KRL Sbjct: 119 LPQGSVVGTSSLRRQCQLRERRPDLIVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ L+ E+ P+ GQGA+ IE +++ + L+ +NH T V ERA L Sbjct: 179 LEQRIRSPLSPEECLPAVGQGAVGIECRLDDETTRALLAPLNHAVTETRVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G +L+ +V + DG R G A +G + A+ + Sbjct: 239 EGGCQVPIGSYAELDGDSLWLRALVGSPDGSQMVRGERRGPAALAEQMGIELAEELLAQG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|261210172|ref|ZP_05924469.1| porphobilinogen deaminase [Vibrio sp. RC341] gi|260840712|gb|EEX67261.1| porphobilinogen deaminase [Vibrio sp. RC341] Length = 311 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + D Sbjct: 59 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYAKIDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL Sbjct: 119 LPSGAVVGTCSLRRQCQLKSARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L Sbjct: 179 LESRIRNFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ +V DG G R +A +G A+ + Sbjct: 239 QGGCQVPIGSYALLEGDHIWLRALVGEPDGSQIVRGEIRGPRSEAEQLGITLAEQLLEQG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKEILD 304 >gi|270264251|ref|ZP_06192518.1| porphobilinogen deaminase [Serratia odorifera 4Rx13] gi|270041900|gb|EFA14997.1| porphobilinogen deaminase [Serratia odorifera 4Rx13] Length = 313 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQQRLMASH--PGLQVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P GL + R+D RD F+S+ S Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIDFPAGLGLVTICERDDPRDAFVSNRFASFDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR++ L R D+ V D RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPQGSVVGTSSLRRQSQLRERRPDLIVRDLRGNVGTRLAKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ L+ E+ P+ GQGA+ IE +++ + L+ +NH T V ERA L Sbjct: 179 LEQRIRSPLSPEECLPAVGQGAVGIECRLDDDATRALLAPLNHAATDIRVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G +L+ +V + DG R G A +G + A+ + Sbjct: 239 EGGCQVPIGSYAELEGDSLWLRALVGSPDGSQMVRGERRGPAALAEQMGVELAEELLARG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|330827978|ref|YP_004390930.1| Porphobilinogen deaminase [Aeromonas veronii B565] gi|328803114|gb|AEB48313.1| Porphobilinogen deaminase [Aeromonas veronii B565] Length = 330 Score = 293 bits (749), Expect = 2e-77, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +I TR SPLAL A + L +H P + ++P+ST+GD+I + L ++GG Sbjct: 22 MAARTLKIATRKSPLALWQANFVKDRLEALH--PQLQVELVPMSTQGDKILDTPLAKVGG 79 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ +++ + Sbjct: 80 KGLFVKELETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFKAIAE 139 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 140 LPQGAVVGTSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLE 199 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I + E P+ GQGA+ IE +++ + L+ + H +T V ERA L Sbjct: 200 MAHRITAFIEPEQSLPANGQGAVGIECRLDDVELHALLAPLEHTETRARVLTERAMNRAL 259 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ G+V + DG G D +G AQ + Sbjct: 260 QGGCQVPIGAYALVEGEQIWLRGLVGSPDGTQVIRDEIRGPLADGEALGEQLAQRLLAAG 319 Query: 301 NKNVF 305 + Sbjct: 320 ADEIL 324 >gi|162139476|ref|YP_855002.2| porphobilinogen deaminase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 315 Score = 293 bits (749), Expect = 2e-77, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 162/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +I TR SPLAL A + L ++ P + ++P+ST+GD+I + L ++GG Sbjct: 7 MAARTLKIATRKSPLALWQANFVKDRLEALY--PELQVELVPMSTQGDKILDTPLAKVGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ + + Sbjct: 65 KGLFVKELETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFGQIDE 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 125 LPQGAVVGTSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLE 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I + E P+ GQGA+ IE +++ + L+ + H +T V ERA L Sbjct: 185 MAHRITAFIEPEQSLPANGQGAVGIECRLDDHELHALLAPLEHPETRIRVLTERAMNRAL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ G+V + DG G D +G AQ + Sbjct: 245 QGGCQVPIGAYALVQGEEVWLRGLVGSPDGSRVIRDEIRGPLADGEALGHTLAQRLLADG 304 Query: 301 NKNVF 305 + Sbjct: 305 ADVIL 309 >gi|262172879|ref|ZP_06040557.1| porphobilinogen deaminase [Vibrio mimicus MB-451] gi|261893955|gb|EEY39941.1| porphobilinogen deaminase [Vibrio mimicus MB-451] Length = 311 Score = 293 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLKVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P KGL + RED RD F+S+T + D Sbjct: 59 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPKGLGLVTICEREDPRDAFVSNTYAKIDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL Sbjct: 119 LPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L Sbjct: 179 LESRIRNFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A G ++ +V DG G R +A +G A+ + Sbjct: 239 QGGCQVPIGSYALLDGDEIWLRALVGEPDGSQIVRGEIRGPRSEAEQLGITLAEQLLGQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|308051395|ref|YP_003914961.1| porphobilinogen deaminase [Ferrimonas balearica DSM 9799] gi|307633585|gb|ADN77887.1| porphobilinogen deaminase [Ferrimonas balearica DSM 9799] Length = 310 Score = 293 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 176/305 (57%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K RI TR SPLAL A ++ L H P + ++ +STKGDRI + L ++GG Sbjct: 1 MARKEIRIATRKSPLALWQAEFVKAELEKAH--PGLTVTLLKMSTKGDRILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E +++GE D AVHS KD+P + +GL ++ RED RD F+S+T ++L D Sbjct: 59 KGLFVKELEVAMLNGEADIAVHSMKDVPVEFPEGLGLAVICDREDPRDAFVSNTYKNLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++G+SSLRR+ L R D+ V D RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 119 LPHGAIVGSSSLRRQCQLRAMRPDLDVRDLRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I + E P+ GQGA+ IE +++ + L+ V+NH T V ERA L Sbjct: 179 LEERITAFIEPEQSLPANGQGAVGIECRLDDAELLALIGVLNHAPTHARVIAERAMNTHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I ++ +G TL+ G+V DG + G DA +G + A+ + Sbjct: 239 EGGCQVPIGAYSVIEGDTLWLRGLVGDPDGSKIIQDELRGPVADAQKLGIELAERLLAQG 298 Query: 301 NKNVF 305 + Sbjct: 299 AGEIL 303 >gi|117559297|gb|ABK36245.1| porphobilinogen deaminase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 330 Score = 293 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 162/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +I TR SPLAL A + L ++ P + ++P+ST+GD+I + L ++GG Sbjct: 22 MAARTLKIATRKSPLALWQANFVKDRLEALY--PELQVELVPMSTQGDKILDTPLAKVGG 79 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ + + Sbjct: 80 KGLFVKELETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFGQIDE 139 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 140 LPQGAVVGTSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLE 199 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I + E P+ GQGA+ IE +++ + L+ + H +T V ERA L Sbjct: 200 MAHRITAFIEPEQSLPANGQGAVGIECRLDDHELHALLAPLEHPETRIRVLTERAMNRAL 259 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ G+V + DG G D +G AQ + Sbjct: 260 QGGCQVPIGAYALVQGEEVWLRGLVGSPDGSRVIRDEIRGPLADGEALGHTLAQRLLADG 319 Query: 301 NKNVF 305 + Sbjct: 320 ADVIL 324 >gi|294142612|ref|YP_003558590.1| porphobilinogen deaminase [Shewanella violacea DSS12] gi|293329081|dbj|BAJ03812.1| porphobilinogen deaminase [Shewanella violacea DSS12] Length = 309 Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats. Identities = 116/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLAL A ++ L H P + ++P+STKGD I + L ++GG Sbjct: 1 MSQNVIRIATRKSPLALWQAEFVKAELEKFH--PGLTVELLPMSTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+ +S+ D Sbjct: 59 KGLFVKELEIAMLDGRADIAVHSIKDVPVDFPDGLGLEVICEREDPRDAFVSNDYKSIDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK Sbjct: 119 LPKGAVVGTSSLRRQCQIRAMRPDLKITDLRGNVGTRLGKLDAGNYDAIILAAAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I ++ E+ P+ GQGA+ IE ++ + + L+ + H +T V ERA L Sbjct: 179 LEERISSFISAEESLPANGQGAVGIECRTDDERVKALLAPLEHTETRYRVTAERAMNTHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I FA +G TL G+V DG + G + DA IG A+ + Sbjct: 239 QGGCQVPIGAFAEIQGDTLTLRGLVGNPDGSKIITGTSVGPKTDAKAIGITLAKELLSKG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKEILD 304 >gi|262404857|ref|ZP_06081411.1| porphobilinogen deaminase [Vibrio sp. RC586] gi|262348941|gb|EEY98080.1| porphobilinogen deaminase [Vibrio sp. RC586] Length = 311 Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + D Sbjct: 59 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTYVKIDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL Sbjct: 119 LPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L Sbjct: 179 LESRIRNFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A G ++ +V DG G R +A +G A+ + Sbjct: 239 QGGCQVPIGSYALLDGDDIWLRALVGEPDGSQIVHGEIRGPRSEAEQLGITLAEQLLEQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|311281516|ref|YP_003943747.1| porphobilinogen deaminase [Enterobacter cloacae SCF1] gi|308750711|gb|ADO50463.1| porphobilinogen deaminase [Enterobacter cloacae SCF1] Length = 318 Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDKVLRIATRQSPLALWQAHYVKDRLTACH--PGLQVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL ++ RED RD F+S+ SL Sbjct: 64 KGLFVKELELALLEHRADIAVHSMKDVPVEFPQGLGLTTICEREDPRDAFVSNQYASLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAAQRPDLVIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L+ E P+ GQGA+ IE +++ + L+ +NH +T V ERA L Sbjct: 184 LESRIRQALSPEQSLPAVGQGAVGIECRLDDDATRALLAPLNHPETAVRVGAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G L+ +V A DG R G +A +G A+ + Sbjct: 244 EGGCQVPIGSYAELQGGELWLRALVGAPDGSRMVRGERRGTPEEAERLGVSLAEELLDNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|258626632|ref|ZP_05721462.1| porphobilinogen deaminase [Vibrio mimicus VM603] gi|258581136|gb|EEW06055.1| porphobilinogen deaminase [Vibrio mimicus VM603] Length = 311 Score = 292 bits (746), Expect = 5e-77, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLKVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + D Sbjct: 59 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTYAKIDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL Sbjct: 119 LPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L Sbjct: 179 LESRIRNFIEPEQSLPAVGQGAVGIECRLDDQRVRELLVPLNHTDTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A G ++ +V DG G R +A +G A+ + Sbjct: 239 QGGCQVPIGSYALLDGDEIWLRALVGEPDGSQIVRGEIRGPRSEAEQLGITLAEQLLGQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|254291929|ref|ZP_04962710.1| porphobilinogen deaminase [Vibrio cholerae AM-19226] gi|150422139|gb|EDN14105.1| porphobilinogen deaminase [Vibrio cholerae AM-19226] Length = 311 Score = 292 bits (746), Expect = 5e-77, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G T++ +V DG G R A +G A+ + Sbjct: 239 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSKIVRGEIRGPRTQAEQLGITLAEQLLSQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|59710673|ref|YP_203449.1| porphobilinogen deaminase [Vibrio fischeri ES114] gi|197333951|ref|YP_002154835.1| porphobilinogen deaminase [Vibrio fischeri MJ11] gi|75431912|sp|Q5E8T5|HEM3_VIBF1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226706298|sp|B5FF97|HEM3_VIBFM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|59478774|gb|AAW84561.1| hydroxymethylbilane synthase [Vibrio fischeri ES114] gi|197315441|gb|ACH64888.1| porphobilinogen deaminase [Vibrio fischeri MJ11] Length = 311 Score = 292 bits (746), Expect = 6e-77, Method: Composition-based stats. Identities = 108/307 (35%), Positives = 168/307 (54%), Gaps = 3/307 (0%) Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M ++ P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++G Sbjct: 1 MSQQLPVRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+T ++ Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNTYNNID 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +V+GT SLRR+ L R D+ + + RG + TRL KL++ AI+LA AG+ RL Sbjct: 119 ELPQGAVVGTCSLRRQCQLKEARPDLIIKELRGNVGTRLQKLDDGNYDAIILACAGLIRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E IK + E P+ GQGA+ IE +++ + + L++ +NH +T + V CERA Sbjct: 179 GLEDRIKSAIEPEQSLPAVGQGAVGIEARLDDDRLRALLEPLNHPETANRVLCERAMNNR 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I ++ G ++ +V DG + +G DA +G A + Sbjct: 239 LEGGCQVPIGSYSLIDGDQIWLRALVGEPDGSVMIRGEVSGPVSDAEALGTQLADQLLND 298 Query: 300 SNKNVFN 306 K + Sbjct: 299 GAKEILE 305 >gi|255743926|ref|ZP_05417881.1| porphobilinogen deaminase [Vibrio cholera CIRS 101] gi|262151165|ref|ZP_06028304.1| porphobilinogen deaminase [Vibrio cholerae INDRE 91/1] gi|262167035|ref|ZP_06034752.1| porphobilinogen deaminase [Vibrio cholerae RC27] gi|262189994|ref|ZP_06048299.1| porphobilinogen deaminase [Vibrio cholerae CT 5369-93] gi|11386839|sp|Q9KVM1|HEM3_VIBCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|255738409|gb|EET93799.1| porphobilinogen deaminase [Vibrio cholera CIRS 101] gi|262024553|gb|EEY43237.1| porphobilinogen deaminase [Vibrio cholerae RC27] gi|262031059|gb|EEY49684.1| porphobilinogen deaminase [Vibrio cholerae INDRE 91/1] gi|262034117|gb|EEY52552.1| porphobilinogen deaminase [Vibrio cholerae CT 5369-93] Length = 311 Score = 291 bits (745), Expect = 7e-77, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G T++ +V DG G R A +G A+ + Sbjct: 239 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|153214841|ref|ZP_01949649.1| porphobilinogen deaminase [Vibrio cholerae 1587] gi|153830620|ref|ZP_01983287.1| porphobilinogen deaminase [Vibrio cholerae 623-39] gi|124115084|gb|EAY33904.1| porphobilinogen deaminase [Vibrio cholerae 1587] gi|148873892|gb|EDL72027.1| porphobilinogen deaminase [Vibrio cholerae 623-39] Length = 311 Score = 291 bits (745), Expect = 7e-77, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G+T++ +V DG G R A +G A+ + Sbjct: 239 QGGCQVPIGSYALLEGNTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|188532369|ref|YP_001906166.1| Porphobilinogen deaminase [Erwinia tasmaniensis Et1/99] gi|238058922|sp|B2VG55|HEM3_ERWT9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|188027411|emb|CAO95258.1| Porphobilinogen deaminase [Erwinia tasmaniensis Et1/99] Length = 313 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L+ H P + ++P+ T+GD I + L ++GG Sbjct: 1 MSDKILRIATRRSPLALWQAEYVQRRLIACH--PGLRVELLPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++SG D AVHS KD+P GL + A RED D F+SH S+ Sbjct: 59 KGLFVKELEQAMLSGSADIAVHSMKDVPVAFPPGLGLVAICEREDPHDAFVSHHYTSVDS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPQGAIVGTSSLRRQCQLSARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I++++ E+ P+ GQGA+ IE +++ + L+ +NH +T V+ ERA L Sbjct: 179 LGDRIRQVMPAEESLPAVGQGAVGIECRLDDIQTIALLAALNHSETACRVSAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + L+ G+V + DG R G R DA +G A+ + Sbjct: 239 EGGCQVPIGSYALLEDDQLWLRGLVGSPDGNEMVRGERRGPRADAEKMGISLAEELLENG 298 Query: 301 NKNVF 305 +++ Sbjct: 299 ARDIL 303 >gi|262273217|ref|ZP_06051033.1| porphobilinogen deaminase [Grimontia hollisae CIP 101886] gi|262222795|gb|EEY74104.1| porphobilinogen deaminase [Grimontia hollisae CIP 101886] Length = 311 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 107/306 (34%), Positives = 165/306 (53%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M P RI TR SPLAL A +++L H P + ++P+ TKGD I + L ++GG Sbjct: 1 MTSTPIRIATRQSPLALWQAEFVKAALEATH--PGLTVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P + +GL + RED RD F+S+ S+ + Sbjct: 59 KGLFVKELEQAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYTSISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+KRL Sbjct: 119 LPQGAIVGTSSLRRQCQLRAMRPDLVIKDLRGNVGTRLGKLDNGEYDAIILASAGLKRLN 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ + E+ P+ GQGA+ IE +++ + + L++ + +T V CERA L Sbjct: 179 LHDRIRNEIEPEEILPAVGQGAVGIECRLDDERVRALLEPLADANTTYRVLCERAMNNRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A G ++ +V DG G A +G A+ + Sbjct: 239 MGGCQVPIGSYAEIHGDQIHLRALVGEPDGSKIVRGEVTGPLEKAEELGTGLAEQLLDDG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 ARAILE 304 >gi|327483021|gb|AEA77428.1| Porphobilinogen deaminase [Vibrio cholerae LMA3894-4] Length = 311 Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G T++ +V DG G R A +G A+ + Sbjct: 239 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|89074445|ref|ZP_01160922.1| porphobilinogen deaminase [Photobacterium sp. SKA34] gi|89049733|gb|EAR55283.1| porphobilinogen deaminase [Photobacterium sp. SKA34] Length = 310 Score = 291 bits (744), Expect = 9e-77, Method: Composition-based stats. Identities = 104/306 (33%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ + H P ++ ++P+ TKGD I + L ++GG Sbjct: 1 MSNQLIRIATRKSPLAMWQAEFVKAEIEQAH--PGISVELVPMITKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ ++ + Sbjct: 59 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNKYNNIDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ V D RG + TRL K++ + AI+LA AG+KRLK Sbjct: 119 LPQGAIVGTSSLRRQCQLRAQRPDLIVNDLRGNVNTRLRKMDEGQYDAIILACAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE +++ + ++L+ ++ + T V CERA L Sbjct: 179 MEDRIRSEIAPEVSLPAVGQGAVGIECRLDDTRVRQLLTALSDQATTTRVLCERAMNNHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ +V DG G A +G A+ + Sbjct: 239 QGGCQVPIGSYAELEGDQVWLRALVGEPDGSKIVRAEIRGPIEQAEQLGETLAEQLLNDG 298 Query: 301 NKNVFN 306 +++ + Sbjct: 299 ARDILD 304 >gi|288937772|ref|YP_003441831.1| porphobilinogen deaminase [Klebsiella variicola At-22] gi|288892481|gb|ADC60799.1| porphobilinogen deaminase [Klebsiella variicola At-22] Length = 318 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +I TR SPLAL A ++ L H P N+ ++P+ T+GD I + L ++GG Sbjct: 6 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLNVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + R+D RD F+S+ S+ + Sbjct: 64 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYASIDE 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRLK Sbjct: 124 LPAGSVVGTSSLRRQCQLAATRPDLVIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLK 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L+ E P+ GQGA+ IE +++ Q L+ +NH +T V ERA L Sbjct: 184 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTQALLAPLNHAETAVRVRAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A L+ +V A DG R G A +G A+ + Sbjct: 244 EGGCQVPIGSYAELVNGELWLRALVGAPDGSQMVRGERRGPAEQAEALGISLAEELLDNG 303 Query: 301 NKNVF 305 +++ Sbjct: 304 ARDIL 308 >gi|153803403|ref|ZP_01957989.1| porphobilinogen deaminase [Vibrio cholerae MZO-3] gi|124121060|gb|EAY39803.1| porphobilinogen deaminase [Vibrio cholerae MZO-3] Length = 311 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L Sbjct: 179 LESRIRSFIEPEQSLPAVGQGAVGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G+T++ +V DG G R A +G A+ + Sbjct: 239 QGGCQVPIGSYALLEGNTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|310766129|gb|ADP11079.1| porphobilinogen deaminase [Erwinia sp. Ejp617] Length = 313 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 173/305 (56%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L+D H P + ++P+ T+GD I + L ++GG Sbjct: 1 MSDKILRIATRKSPLALWQAKYVQQRLIDCH--PGLRVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++SG D AVHS KD+P +GL + A R+D D F+S+ S+ Sbjct: 59 KGLFVKELEQAMLSGSADIAVHSMKDVPVAFPQGLGLVAICERDDPHDAFVSNRHASVDS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPQGAIVGTSSLRRQCQLSARRPDLVIHSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I++++ E+ P+ GQGA+ IE +++ L+ +NH++T V+ ERA L Sbjct: 179 LSDRIRQVMPAEESLPAVGQGAVGIECRLDDMHTIGLLAALNHDETACRVSAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G L+ G+V + DG R G+R DA +G A+ + Sbjct: 239 EGGCQVPIGSYALLEGDQLWLRGLVGSPDGSQMVRGERRGSRADAEKMGISLAEELLDNG 298 Query: 301 NKNVF 305 +++ Sbjct: 299 ARDIL 303 >gi|238793582|ref|ZP_04637206.1| Porphobilinogen deaminase [Yersinia intermedia ATCC 29909] gi|238727172|gb|EEQ18702.1| Porphobilinogen deaminase [Yersinia intermedia ATCC 29909] Length = 313 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S + D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPVAFPEGLGLVTICERDDPRDAFVSPHFAHIDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ + E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L Sbjct: 179 LASRIRYAMPAEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRVTELRVCAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G+TL+ G+V A DG R G +A +G + A + Sbjct: 239 EGGCQVPIGSYAELEGNTLWLRGLVGAPDGSEIIRGERRGPAENAEQMGIELADELLSRG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARAIL 303 >gi|259906881|ref|YP_002647237.1| porphobilinogen deaminase [Erwinia pyrifoliae Ep1/96] gi|224962503|emb|CAX53958.1| Porphobilinogen deaminase [Erwinia pyrifoliae Ep1/96] gi|283476674|emb|CAY72503.1| hemC [Erwinia pyrifoliae DSM 12163] Length = 313 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 172/305 (56%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L+D H P + ++P+ T+GD I + L ++GG Sbjct: 1 MSDKILRIATRKSPLALWQAKYVQQRLIDCH--PGLRVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++SG D AVHS KD+P +GL + A R+D D F+S+ S+ Sbjct: 59 KGLFVKELEQAMLSGSADIAVHSMKDVPVAFPQGLGLVAICERDDPHDAFVSNRHASVDS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPQGAIVGTSSLRRQCQLSARRPDLVIHSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I++++ E+ P+ GQGA+ IE + + L+ +NH++T V+ ERA L Sbjct: 179 LSDRIRQVMPAEESLPAVGQGAVGIECRLEDMHTIGLLAALNHDETACRVSAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G L+ G+V + DG R G+R DA +G A+ + Sbjct: 239 EGGCQVPIGSYALLEGDQLWLRGLVGSPDGSQMVRGERRGSRADAEKMGISLAEELLDNG 298 Query: 301 NKNVF 305 +++ Sbjct: 299 ARDIL 303 >gi|238750675|ref|ZP_04612174.1| Porphobilinogen deaminase [Yersinia rohdei ATCC 43380] gi|238711065|gb|EEQ03284.1| Porphobilinogen deaminase [Yersinia rohdei ATCC 43380] Length = 313 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLNKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S L D Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSSHYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ + E+ P+ GQGA+ IE +++ ++L+ +NH +T V ERA L Sbjct: 179 LKSRIRYAMPAEESLPAVGQGAVGIECRLDDDFTRQLLVPLNHRETELRVCAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G TL+ +V A DG R G DA +G + A + Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSEIIRGERRGPAEDAEQMGIELADELLSRG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|206580079|ref|YP_002241132.1| porphobilinogen deaminase [Klebsiella pneumoniae 342] gi|290513167|ref|ZP_06552529.1| porphobilinogen deaminase [Klebsiella sp. 1_1_55] gi|226706289|sp|B5XYL1|HEM3_KLEP3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|206569137|gb|ACI10913.1| porphobilinogen deaminase [Klebsiella pneumoniae 342] gi|289774378|gb|EFD82384.1| porphobilinogen deaminase [Klebsiella sp. 1_1_55] Length = 313 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +I TR SPLAL A ++ L H P N+ ++P+ T+GD I + L ++GG Sbjct: 1 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLNVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + R+D RD F+S+ S+ + Sbjct: 59 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYASIDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRLK Sbjct: 119 LPAGSVVGTSSLRRQCQLAATRPDLVIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L+ E P+ GQGA+ IE +++ Q L+ +NH +T V ERA L Sbjct: 179 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTQALLAPLNHAETAVRVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A L+ +V A DG R G A +G A+ + Sbjct: 239 EGGCQVPIGSYAELVNGELWLRALVGAPDGSQMVRGERRGPAEQAEALGISLAEELLDNG 298 Query: 301 NKNVF 305 +++ Sbjct: 299 ARDIL 303 >gi|238765355|ref|ZP_04626280.1| Porphobilinogen deaminase [Yersinia kristensenii ATCC 33638] gi|238696442|gb|EEP89234.1| Porphobilinogen deaminase [Yersinia kristensenii ATCC 33638] Length = 313 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL + R+D RD F+S L D Sbjct: 59 KGLFVKELELAMLDGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSSNYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + HAI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDKGEYHAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH +T V ERA L Sbjct: 179 LETRIRYAMPAEESLPAVGQGAVGIECRLDDDYTRQLLAPLNHRETELRVCAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G+TL+ +V A DG R G +A +G + A + Sbjct: 239 EGGCQVPIGSYAELDGNTLWLRALVGAPDGSEIIRGERRGPAENAEQMGVELADELLARG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|15640152|ref|NP_229779.1| porphobilinogen deaminase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587718|ref|ZP_01677479.1| porphobilinogen deaminase [Vibrio cholerae 2740-80] gi|121728303|ref|ZP_01681334.1| porphobilinogen deaminase [Vibrio cholerae V52] gi|147675270|ref|YP_001218298.1| porphobilinogen deaminase [Vibrio cholerae O395] gi|153818935|ref|ZP_01971602.1| porphobilinogen deaminase [Vibrio cholerae NCTC 8457] gi|153822325|ref|ZP_01974992.1| porphobilinogen deaminase [Vibrio cholerae B33] gi|227080356|ref|YP_002808907.1| porphobilinogen deaminase [Vibrio cholerae M66-2] gi|229508398|ref|ZP_04397902.1| porphobilinogen deaminase [Vibrio cholerae BX 330286] gi|229508921|ref|ZP_04398411.1| porphobilinogen deaminase [Vibrio cholerae B33] gi|229517035|ref|ZP_04406481.1| porphobilinogen deaminase [Vibrio cholerae RC9] gi|229606671|ref|YP_002877319.1| porphobilinogen deaminase [Vibrio cholerae MJ-1236] gi|254851504|ref|ZP_05240854.1| porphobilinogen deaminase [Vibrio cholerae MO10] gi|298501111|ref|ZP_07010911.1| porphobilinogen deaminase [Vibrio cholerae MAK 757] gi|9654520|gb|AAF93298.1| porphobilinogen deaminase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548017|gb|EAX58095.1| porphobilinogen deaminase [Vibrio cholerae 2740-80] gi|121629433|gb|EAX61862.1| porphobilinogen deaminase [Vibrio cholerae V52] gi|126510497|gb|EAZ73091.1| porphobilinogen deaminase [Vibrio cholerae NCTC 8457] gi|126520151|gb|EAZ77374.1| porphobilinogen deaminase [Vibrio cholerae B33] gi|146317153|gb|ABQ21692.1| porphobilinogen deaminase [Vibrio cholerae O395] gi|227008244|gb|ACP04456.1| porphobilinogen deaminase [Vibrio cholerae M66-2] gi|227011878|gb|ACP08088.1| porphobilinogen deaminase [Vibrio cholerae O395] gi|229346098|gb|EEO11070.1| porphobilinogen deaminase [Vibrio cholerae RC9] gi|229354038|gb|EEO18971.1| porphobilinogen deaminase [Vibrio cholerae B33] gi|229354671|gb|EEO19593.1| porphobilinogen deaminase [Vibrio cholerae BX 330286] gi|229369326|gb|ACQ59749.1| porphobilinogen deaminase [Vibrio cholerae MJ-1236] gi|254847209|gb|EET25623.1| porphobilinogen deaminase [Vibrio cholerae MO10] gi|297540145|gb|EFH76206.1| porphobilinogen deaminase [Vibrio cholerae MAK 757] Length = 317 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G T++ +V DG G R A +G A+ + Sbjct: 245 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304 Query: 301 NKNVFN 306 K + Sbjct: 305 AKEILE 310 >gi|238892405|ref|YP_002917139.1| porphobilinogen deaminase [Klebsiella pneumoniae NTUH-K2044] gi|329997497|ref|ZP_08302799.1| hydroxymethylbilane synthase [Klebsiella sp. MS 92-3] gi|238544721|dbj|BAH61072.1| porphobilinogen deaminase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328539065|gb|EGF65104.1| hydroxymethylbilane synthase [Klebsiella sp. MS 92-3] Length = 318 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +I TR SPLAL A ++ L H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLKVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + R+D RD F+S+ S+ + Sbjct: 64 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNRYASIDE 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+++ RG + TRL+KL+N + AI+LA AG+KRL+ Sbjct: 124 LPAGSVVGTSSLRRQCQLAATRPDLAIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLQ 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L+ E P+ GQGA+ IE +++ + L+ +NH +T V ERA L Sbjct: 184 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTRGLLAPLNHTETAVRVRAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A K L+ +V A DG R G A +G A+ + Sbjct: 244 EGGCQVPIGSYAELKDGELWLRALVGAPDGSQLVRGERRGPAEQAEALGISLAEELLDNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|238760184|ref|ZP_04621331.1| Porphobilinogen deaminase [Yersinia aldovae ATCC 35236] gi|238701620|gb|EEP94190.1| Porphobilinogen deaminase [Yersinia aldovae ATCC 35236] Length = 313 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P GL + R+D RD F+S L D Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIAFPDGLGLVTICERDDPRDAFVSSHFAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + HAI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLVIRDLRGNVGTRLAKLDKGEYHAIILAVAGLNRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH DT V ERA L Sbjct: 179 LETRIRYAMPAEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRDTELRVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G TL+ +V A DG R G +A +G + A + Sbjct: 239 EGGCQVPIGSYAELDGDTLWLRALVGAPDGSEIIRGERRGPVANAEQMGIELADELLSRG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|152972793|ref|YP_001337939.1| porphobilinogen deaminase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|166217775|sp|A6TGI8|HEM3_KLEP7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|150957642|gb|ABR79672.1| porphobilinogen deaminase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 313 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +I TR SPLAL A ++ L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLKVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + R+D RD F+S+ S+ + Sbjct: 59 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNRYASIDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+++ RG + TRL+KL+N + AI+LA AG+KRL+ Sbjct: 119 LPAGSVVGTSSLRRQCQLAATRPDLAIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLQ 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L+ E P+ GQGA+ IE +++ + L+ +NH +T V ERA L Sbjct: 179 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTRGLLAPLNHTETAVRVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A K L+ +V A DG R G A +G A+ + Sbjct: 239 EGGCQVPIGSYAELKDGELWLRALVGAPDGSQLVRGERRGPAEQAEALGISLAEELLDNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|229525016|ref|ZP_04414421.1| porphobilinogen deaminase [Vibrio cholerae bv. albensis VL426] gi|229338597|gb|EEO03614.1| porphobilinogen deaminase [Vibrio cholerae bv. albensis VL426] Length = 317 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G+T++ +V DG G R A +G A+ + Sbjct: 245 QGGCQVPIGSYALLEGNTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304 Query: 301 NKNVFN 306 K + Sbjct: 305 AKEILE 310 >gi|258623142|ref|ZP_05718154.1| porphobilinogen deaminase [Vibrio mimicus VM573] gi|258584625|gb|EEW09362.1| porphobilinogen deaminase [Vibrio mimicus VM573] Length = 326 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 16 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLKVELVTMVTRGDVILDTPLAKVGG 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + D Sbjct: 74 KGLFVKELEVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTYAKIDD 133 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 134 LPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 193 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE +++ + +EL+ +NH DT D V CERA L Sbjct: 194 LESRIRSFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTL 253 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A G ++ +V DG G R +A +G A+ + Sbjct: 254 QGGCQVPIGSYALLDGDEIWLRALVGEPDGSQIVRGEIRGPRSEAEQLGITLAEQLLGQG 313 Query: 301 NKNVFN 306 K + Sbjct: 314 AKEILE 319 >gi|163748699|ref|ZP_02155952.1| porphobilinogen deaminase [Shewanella benthica KT99] gi|161331809|gb|EDQ02613.1| porphobilinogen deaminase [Shewanella benthica KT99] Length = 309 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 118/306 (38%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLAL A ++ L H P + ++P+STKGD I + L ++GG Sbjct: 1 MSQNVIRIATRKSPLALWQAEFVKAELEKFH--PGLTVELLPMSTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P GL + RED RD F+S+ +S+ D Sbjct: 59 KGLFVKELEVAILEDRADIAVHSIKDVPVDFPDGLGLEVICEREDPRDAFVSNDYKSIGD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ +ID RG + TRL KL+ AI+LA AG+KRLK Sbjct: 119 LPQGAVVGTSSLRRQCQIRGMRPDLKIIDLRGNVGTRLGKLDAGNYDAIILAAAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I ++ ED P+ GQGA+ IE +N + + L+ + H +T V ERA L Sbjct: 179 LEERITSFISTEDSLPANGQGAVGIECRTDNERVKALLAPLEHAETRFRVTAERAMNTHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA +G TL G+V DG + G + DA IG A+ + Sbjct: 239 EGGCQVPIGAFAEIQGDTLTLRGLVGNPDGSKIITGTCVGPKTDAKAIGIALAEELLGKG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKEILD 304 >gi|229515846|ref|ZP_04405304.1| porphobilinogen deaminase [Vibrio cholerae TMA 21] gi|229527138|ref|ZP_04416532.1| porphobilinogen deaminase [Vibrio cholerae 12129(1)] gi|229335369|gb|EEO00852.1| porphobilinogen deaminase [Vibrio cholerae 12129(1)] gi|229347109|gb|EEO12070.1| porphobilinogen deaminase [Vibrio cholerae TMA 21] Length = 317 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G T++ +V DG G R A +G A+ + Sbjct: 245 QGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304 Query: 301 NKNVFN 306 K + Sbjct: 305 AKEILE 310 >gi|254473214|ref|ZP_05086612.1| porphobilinogen deaminase [Pseudovibrio sp. JE062] gi|211957935|gb|EEA93137.1| porphobilinogen deaminase [Pseudovibrio sp. JE062] Length = 307 Score = 290 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 136/306 (44%), Positives = 195/306 (63%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KP RIGTR S LALA A ETR+ L H + + I+ + T GD+I +R L+E GG Sbjct: 1 MQTKPIRIGTRGSALALAQAHETRARLAKAHGLTDDDFEIVVIKTTGDQIQDRPLSEAGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+ ID AVHS+KDMPT L GL ++AYLPRED+RD FIS + L D Sbjct: 61 KGLFTKEIEEALLDKSIDLAVHSSKDMPTVLPDGLGMTAYLPREDVRDAFISPKVEKLTD 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+G+SSLRR+A + R R D+ V+ +RG ++TRL KL+ A LAYAG++RL Sbjct: 121 LPQGAVVGSSSLRRQAQIKRLRPDLDVVMYRGNLQTRLRKLDEGVVDATFLAYAGLRRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + ++ ++++E F P+ GQGAI IE + + + ++ I+H +T + ERA+LAE+ Sbjct: 181 QGDLVTSLMDLEHFLPAVGQGAIGIEARLGDEETARILAPIHHAETESRLLLERAYLAEM 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG ++ +G + F G V+ DG H V G DA IGR+ + ++ S Sbjct: 241 DGSCRTPIAGLSHVEGDRIKFRGEVIKPDGSQTHTVEGEGPVSDAEEIGRELGKELKAKS 300 Query: 301 NKNVFN 306 N Sbjct: 301 GPNFLE 306 >gi|21957067|gb|AAM83970.1|AE013638_8 porphobilinogen deaminase; hydroxymethylbilane synthase [Yersinia pestis KIM 10] gi|45437816|gb|AAS63365.1| porphobilinogen deaminase [Yersinia pestis biovar Microtus str. 91001] Length = 369 Score = 290 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 117/305 (38%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG Sbjct: 57 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 114 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D Sbjct: 115 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDD 174 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL Sbjct: 175 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 234 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L Sbjct: 235 LENRIRYAMSAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRL 294 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G TL+ +V A DG R G +A +G + A + Sbjct: 295 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELADELLSRG 354 Query: 301 NKNVF 305 + + Sbjct: 355 AREIL 359 >gi|297581838|ref|ZP_06943759.1| porphobilinogen deaminase [Vibrio cholerae RC385] gi|297533932|gb|EFH72772.1| porphobilinogen deaminase [Vibrio cholerae RC385] Length = 317 Score = 290 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 115/306 (37%), Positives = 170/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L RSD+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARSDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G+T++ +V DG G R A +G A+ + Sbjct: 245 QGGCQVPIGSYALLEGNTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304 Query: 301 NKNVFN 306 K + Sbjct: 305 AKEILE 310 >gi|153826278|ref|ZP_01978945.1| porphobilinogen deaminase [Vibrio cholerae MZO-2] gi|149739946|gb|EDM54125.1| porphobilinogen deaminase [Vibrio cholerae MZO-2] Length = 311 Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 1 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 59 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 119 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L Sbjct: 179 LESRIRSFIEPEQSLPAVGQGALGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ +V DG G R A +G A+ + Sbjct: 239 QGGCQVPIGSYALLEGDHIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 AKEILE 304 >gi|156935870|ref|YP_001439786.1| porphobilinogen deaminase [Cronobacter sakazakii ATCC BAA-894] gi|166217766|sp|A7MQJ1|HEM3_ENTS8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|156534124|gb|ABU78950.1| hypothetical protein ESA_03753 [Cronobacter sakazakii ATCC BAA-894] Length = 313 Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAQYVKQRLEACH--PGLTVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ +SL + Sbjct: 59 KGLFVKELELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQYKSLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + S++GTSSLRR+ + R D+ + RG + TRL+KL+N AI+LA AG+KRL+ Sbjct: 119 MPAGSIVGTSSLRRQCQIAARRPDLIIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLQ 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I L E P+ GQGA+ IE +++ + +EL+ +NHE+T V ERA L Sbjct: 179 LDARITSPLAPEISLPAVGQGAVGIECRLDDTRTRELLAPLNHEETAVRVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + L+ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELRDGELWLRALVGAPDGSRIVRGERRGAPEDARQLGISLAEELLNHG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|238784737|ref|ZP_04628740.1| Porphobilinogen deaminase [Yersinia bercovieri ATCC 43970] gi|238714333|gb|EEQ06342.1| Porphobilinogen deaminase [Yersinia bercovieri ATCC 43970] Length = 313 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLHVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P GL + R+D RD F+S + L D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPDGLGLVTICERDDPRDAFVSSSYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + +E+ P+ GQGA+ IE +++ ++L+ +NH DT V ERA L Sbjct: 179 LETRIRYAMPVEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRDTELRVCAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G L+ +V A DG R G +A +G + A + Sbjct: 239 EGGCQVPIGSYAELEGDVLWLRALVGAPDGSEIIRGERRGPANNAEQMGIELADELLSRG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|238789375|ref|ZP_04633161.1| Porphobilinogen deaminase [Yersinia frederiksenii ATCC 33641] gi|238722518|gb|EEQ14172.1| Porphobilinogen deaminase [Yersinia frederiksenii ATCC 33641] Length = 313 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQDLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S L D Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSPNYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH +T V ERA L Sbjct: 179 LETRIRSAMPAEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRETELRVCAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G L+ +V A DG R G A +G + A + Sbjct: 239 EGGCQVPIGSYAELEGDILWLRALVGAPDGSEIIRGERRGPAQHAEQMGIELADELLSRG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|262040885|ref|ZP_06014111.1| hydroxymethylbilane synthase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041774|gb|EEW42819.1| hydroxymethylbilane synthase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 318 Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 168/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +I TR SPLAL A ++ L H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDKVLKIATRQSPLALWQAQYVKARLEQAH--PGLKVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + + L + R+D RD F+S+ S+ + Sbjct: 64 KGLFVKELELAMLEGRADIAVHSMKDVPVEFPECLGLVTICERDDPRDAFVSNRYASIDE 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+++ RG + TRL+KL+N + AI+LA AG+KRL+ Sbjct: 124 LPAGSVVGTSSLRRQCQLAATRPDLAIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLQ 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L+ E P+ GQGA+ IE +++ + L+ +NH +T V ERA L Sbjct: 184 LEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTRGLLAPLNHTETAVRVRAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A K L+ +V A DG R G A +G A+ + Sbjct: 244 EGGCQVPIGSYAELKDGELWLRALVGAPDGSQLVRGERRGPAEQAEALGISLAEELLDNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|324111028|gb|EGC05015.1| porphobilinogen deaminase [Escherichia fergusonii B253] gi|325499227|gb|EGC97086.1| porphobilinogen deaminase [Escherichia fergusonii ECD227] Length = 313 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDALMAKH--PGLTVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL + Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNKYASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRDALPPEVSLPAVGQGAVGIECRLDDTRTRELLAALNHPETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G ++ +V A DG R G+ DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIGGEIWLRALVGAPDGSQMIRGERRGSPQDAEKMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARAIL 303 >gi|218550973|ref|YP_002384764.1| porphobilinogen deaminase [Escherichia fergusonii ATCC 35469] gi|226740637|sp|B7LU53|HEM3_ESCF3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|218358514|emb|CAQ91161.1| hydroxymethylbilane synthase [Escherichia fergusonii ATCC 35469] Length = 313 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDALMAKH--PGLTVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL + Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNKYASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRDALPPEVSLPAVGQGAVGIECRLDDTRTRELLAALNHPETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G ++ +V A DG R G+ DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIGGEIWLRALVGAPDGSQMIRGERRGSPQDAEKMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARAIL 303 >gi|170724850|ref|YP_001758876.1| porphobilinogen deaminase [Shewanella woodyi ATCC 51908] gi|238059003|sp|B1KQC6|HEM3_SHEWM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|169810197|gb|ACA84781.1| porphobilinogen deaminase [Shewanella woodyi ATCC 51908] Length = 309 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLAL A ++ L H P + ++P+STKGD I + L ++GG Sbjct: 1 MSQNVIRIATRKSPLALWQAEFVKAELEKFH--PDLTVELLPMSTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +S+ + Sbjct: 59 KGLFVKELEVAMLENRADIAVHSMKDVPVDFPEGLGLEIICEREDPRDAFVSNNYKSISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK Sbjct: 119 LPKGAVVGTSSLRRQCQIRAARPDLQIRDLRGNVGTRLGKLDAGTYDAIILAAAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I ++ E+ P+ GQGA+ IE ++ + + L+ + H +T V ERA L Sbjct: 179 LEERITSFISAEESLPANGQGAVGIECRTDDERVKALLAPLEHAETRFRVIAERAMNTHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A TL G+V DG ++ G + DA +G A+ + Sbjct: 239 EGGCQVPIGAYAEIVDDTLTLRGLVGNPDGTQIIASTKVGPKTDAKALGISLAEELLSKG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKTILD 304 >gi|157960202|ref|YP_001500236.1| porphobilinogen deaminase [Shewanella pealeana ATCC 700345] gi|189028157|sp|A8GZG4|HEM3_SHEPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157845202|gb|ABV85701.1| porphobilinogen deaminase [Shewanella pealeana ATCC 700345] Length = 310 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 172/306 (56%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H+ + ++P+STKGD I + L ++GG Sbjct: 1 MSQNLIRIATRKSPLAMWQAEFVKAELEKIHE--GLTVELLPMSTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++++D Sbjct: 59 KGLFVKELEVAMLEGLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNTYKTIED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK Sbjct: 119 LPQGAVVGTSSLRRQCQIRAARPDLVIKDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I ++ E P+ GQGA+ IE ++ + + L+ + H +T V ERA L Sbjct: 179 LEERIASFISAEQSLPANGQGAVGIECRTDDARVKALLAPLEHAETRMRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G TL G+V DG S +G+ DA +G A+ + Sbjct: 239 EGGCQVPIGAYAEIDGDTLSLRGLVGNPDGSQIITASSSGSTADAEKLGVALAEELLSKG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKTILD 304 >gi|292486675|ref|YP_003529545.1| Porphobilinogen deaminase [Erwinia amylovora CFBP1430] gi|292897912|ref|YP_003537281.1| porphobilinogen deaminase [Erwinia amylovora ATCC 49946] gi|291197760|emb|CBJ44855.1| porphobilinogen deaminase [Erwinia amylovora ATCC 49946] gi|291552092|emb|CBA19129.1| Porphobilinogen deaminase [Erwinia amylovora CFBP1430] gi|312170741|emb|CBX79003.1| Porphobilinogen deaminase [Erwinia amylovora ATCC BAA-2158] Length = 313 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 173/305 (56%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L+D H P + ++P+ T+GD I + L ++GG Sbjct: 1 MSDKILRIATRKSPLALWQAKYVQQRLIDCH--PRLRVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++SG D AVHS KD+P +GL + A R+D D F+S+ S+ Sbjct: 59 KGLFVKELENAMLSGHADIAVHSMKDVPVAFPQGLGLVAICERDDPHDAFVSNHYASVDS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPAGAIVGTSSLRRQCQLSARRPDLVIHSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I++++ E+ P+ GQGA+ IE +++ + L+ +NH+DT V+ ERA L Sbjct: 179 LSGRIRQVMPAEESLPAVGQGAVGIECRLDDMRTIGLLAALNHDDTACRVSAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G L+ G+V + DG R G+R DA +G A+ + Sbjct: 239 EGGCQVPIGSYALLEGDRLWLRGLVGSPDGSQMVRGERRGSRADAEKMGISLAEELLDNG 298 Query: 301 NKNVF 305 +++ Sbjct: 299 ARDIL 303 >gi|123440582|ref|YP_001004576.1| porphobilinogen deaminase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332159812|ref|YP_004296389.1| porphobilinogen deaminase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|158512667|sp|A1JI86|HEM3_YERE8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|122087543|emb|CAL10324.1| porphobilinogen deaminase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318607646|emb|CBY29144.1| porphobilinogen deaminase [Yersinia enterocolitica subsp. palearctica Y11] gi|325664042|gb|ADZ40686.1| porphobilinogen deaminase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862558|emb|CBX72712.1| porphobilinogen deaminase [Yersinia enterocolitica W22703] Length = 313 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S L + Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSINYAHLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + HAI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDKGEYHAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH +T V ERA L Sbjct: 179 LETRIRYAMPAEESLPAVGQGAVGIECRLDDNFTRQLLAPLNHRETELRVCAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G TL+ +V A DG R G +A +G + A + Sbjct: 239 EGGCQVPIGSYAELDGDTLWLRALVGAPDGSEIIRGERRGPAENAEQMGVELADELLSRG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|261250035|ref|ZP_05942612.1| porphobilinogen deaminase [Vibrio orientalis CIP 102891] gi|260939539|gb|EEX95524.1| porphobilinogen deaminase [Vibrio orientalis CIP 102891] Length = 312 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 173/306 (56%), Gaps = 3/306 (0%) Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++G Sbjct: 1 MTQSTPIRIATRKSPLALWQAHFVKDALKAAH--PGLEVELVTMVTKGDIILDTPLAKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHNID 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +++GT SLRR+ L +R D+ + + RG + TRL KL++ + AI+LA AG+KRL Sbjct: 119 ELPQGAIVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDDGQYDAIILAAAGLKRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E+ IK + E P+ GQGA+ IE +++ + +L++ +NH++T D V CERA Sbjct: 179 ELEERIKSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKETADRVLCERAMNLT 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I ++ G ++ +V DG G+R DA +G + A + Sbjct: 239 LEGGCQVPIGSYSLIDGDNIWLRALVGEPDGSKIIRGEIRGSRADAETLGVELANQLLDD 298 Query: 300 SNKNVF 305 K + Sbjct: 299 GAKEIL 304 >gi|27364543|ref|NP_760071.1| porphobilinogen deaminase [Vibrio vulnificus CMCP6] gi|37678265|ref|NP_932874.1| porphobilinogen deaminase [Vibrio vulnificus YJ016] gi|33301181|sp|Q8DD85|HEM3_VIBVU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|55976475|sp|Q7MQC7|HEM3_VIBVY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|27360662|gb|AAO09598.1| porphobilinogen deaminase [Vibrio vulnificus CMCP6] gi|37197004|dbj|BAC92845.1| porphobilinogen deaminase [Vibrio vulnificus YJ016] Length = 312 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 110/301 (36%), Positives = 167/301 (55%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++GGKGLF Sbjct: 6 PIRIATRKSPLALWQAYYVKDALQKAH--PGLEVELVTMVTKGDVILDTPLAKVGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + +L Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHHVDELPQG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GT SLRR+ L +R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ E+ Sbjct: 124 AVVGTCSLRRQCQLKAYRPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELEER 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + E P+ GQGA+ IE N+ + +L++ +NH DT D V CERA L+G C Sbjct: 184 IRSFIEPEQSLPAVGQGAVGIECRTNDERILKLLEPLNHADTADRVKCERAMNLTLEGGC 243 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I +A +G ++ +V DG G R A +G A + + + Sbjct: 244 QVPIGSYALLEGDEIWLRALVGEPDGSEIVRGEIRGPRAQAEQLGVQLANQLLDEGAREI 303 Query: 305 F 305 Sbjct: 304 L 304 >gi|320154944|ref|YP_004187323.1| porphobilinogen deaminase [Vibrio vulnificus MO6-24/O] gi|319930256|gb|ADV85120.1| porphobilinogen deaminase [Vibrio vulnificus MO6-24/O] Length = 312 Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats. Identities = 110/301 (36%), Positives = 167/301 (55%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++GGKGLF Sbjct: 6 PIRIATRKSPLALWQAYYVKDALQKAH--PGLEVELVTMVTKGDVILDTPLAKVGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + +L Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHHVDELPQG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GT SLRR+ L +R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ E+ Sbjct: 124 AVVGTCSLRRQCQLKAYRPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELEER 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + E P+ GQGA+ IE N+ + +L++ +NH DT D V CERA L+G C Sbjct: 184 IRSFIEPEQSLPAVGQGAVGIECRTNDERILKLLEPLNHTDTADRVKCERAMNLTLEGGC 243 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I +A +G ++ +V DG G R A +G A + + + Sbjct: 244 QVPIGSYALLEGDEIWLRALVGEPDGSEIVRGEIRGPRAQAEQLGVQLANQLLDEGAREI 303 Query: 305 F 305 Sbjct: 304 L 304 >gi|145300736|ref|YP_001143577.1| porphobilinogen deaminase [Aeromonas salmonicida subsp. salmonicida A449] gi|142853508|gb|ABO91829.1| porphobilinogen deaminase [Aeromonas salmonicida subsp. salmonicida A449] Length = 315 Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 162/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +I TR SPLAL A + L ++ P + ++P+ST+GD+I + L ++GG Sbjct: 7 MAARTLKIATRKSPLALWQANFVKDRLEALY--PELQVELVPMSTQGDKILDTPLAKVGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ ++ Sbjct: 65 KGLFVKELETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFSQIEA 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 125 LPQGAVVGTSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLE 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I + E P+ GQGA+ IE +++ + L+ + H +T V ERA L Sbjct: 185 MAHRITAFIEPEQSLPANGQGAVGIECRLDDHELHTLLAPLEHAETRIRVLTERAMNRAL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ G+V + DG G D +G AQ + Sbjct: 245 QGGCQVPIGAYALVQGDEVWLRGLVGSPDGSQVIHDEIRGPLADGEALGHTLAQRLLAAG 304 Query: 301 NKNVF 305 + Sbjct: 305 ADVIL 309 >gi|114561627|ref|YP_749140.1| porphobilinogen deaminase [Shewanella frigidimarina NCIMB 400] gi|122300909|sp|Q088L3|HEM3_SHEFN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|114332920|gb|ABI70302.1| porphobilinogen deaminase [Shewanella frigidimarina NCIMB 400] Length = 309 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 171/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L +IGG Sbjct: 1 MSENIIRIATRKSPLAMWQAEFVKAELERIH--PGLTVELLPMSTKGDVILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P + +GL + RED RD F+S+ +S+ + Sbjct: 59 KGLFVKELEVAMLENRADIAVHSMKDLPVEFPEGLGLQVICEREDPRDAFVSNNYKSISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + D RG + TRL KL++ AI+LA AG+ RLK Sbjct: 119 LPQGAVVGTSSLRRQCQIRAARPDLVIKDLRGNVGTRLAKLDSGDYDAIILAAAGLIRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++ E+ P+ GQGA+ IE ++ + + L+ + H +T V ERA L Sbjct: 179 LNERIANFISAEESLPANGQGAVGIECRTDDARVKALLAPLEHLETRYRVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA G L G+V DG + +G++ DA+ +G A+ + Sbjct: 239 EGGCQVPIGAFAEINGDNLTLRGLVGNPDGSQIIIGTVSGSKTDAVALGESLAEDLLSRG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKTILD 304 >gi|260596029|ref|YP_003208600.1| porphobilinogen deaminase [Cronobacter turicensis z3032] gi|260215206|emb|CBA27057.1| Porphobilinogen deaminase [Cronobacter turicensis z3032] Length = 313 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAQYVKQRLEACH--PGLTVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ +SL + Sbjct: 59 KGLFVKELELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNRYKSLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + S++GTSSLRR+ + R D+ + RG + TRL+KL+N AI+LA AG+KRL+ Sbjct: 119 MPAGSIVGTSSLRRQCQIAARRPDLIIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLQ 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I L E P+ GQGA+ IE +++ + +EL+ +NHE+T V ERA L Sbjct: 179 LDARITSPLAPEISLPAVGQGAVGIECRLDDTRTRELLAPLNHEETAVRVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A K L+ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELKDGELWLRALVGAPDGSRIVRGERRGAPQDASQLGVSLAEELLNHG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|157377265|ref|YP_001475865.1| porphobilinogen deaminase [Shewanella sediminis HAW-EB3] gi|189028158|sp|A8G0W4|HEM3_SHESH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157319639|gb|ABV38737.1| Hydroxymethylbilane synthase [Shewanella sediminis HAW-EB3] Length = 309 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 172/306 (56%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLAL A ++ L H+ + ++P+STKGD I + L ++GG Sbjct: 1 MSQNVIRIATRKSPLALWQAEFVKAELEKFHE--GLTVELLPMSTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +++ + Sbjct: 59 KGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNNYKNISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK Sbjct: 119 LPQGAVVGTSSLRRQCQIRASRPDLVIRDLRGNVGTRLGKLDAGNYDAIILAAAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I ++ E+ P+ GQGA+ IE +N+ + + L+ + H +T V ERA L Sbjct: 179 LEERITSFISAEESLPANGQGAVGIECRINDERVKALLAPLEHTETRHRVIAERAMNTHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + TL G+V DG E ++ G++ DA IG A+ + Sbjct: 239 EGGCQVPIGAYAEIQDDTLTLRGLVGNPDGSHIIEATKVGSKTDAQAIGVALAEELLSKG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKAILD 304 >gi|148978777|ref|ZP_01815157.1| porphobilinogen deaminase [Vibrionales bacterium SWAT-3] gi|145962198|gb|EDK27482.1| porphobilinogen deaminase [Vibrionales bacterium SWAT-3] Length = 326 Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 173/306 (56%), Gaps = 3/306 (0%) Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++G Sbjct: 15 MTNSAPIRIATRKSPLALWQAYFVRDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVG 72 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ Sbjct: 73 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNID 132 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +V+GT SLRR+ LL +R D+ + + RG + TRL KL++ + AI+LA AG+KRL Sbjct: 133 ELPQGAVVGTCSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRL 192 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA Sbjct: 193 ELEERIRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHQDTADRVLCERAMNLT 252 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I ++ G ++ +V DG +G R DA +G A + Sbjct: 253 LEGGCQVPIGSYSLLDGDNIWLRALVGEPDGSKMVRGEISGPRKDAEALGVTLANQLLDD 312 Query: 300 SNKNVF 305 + + Sbjct: 313 GAREIL 318 >gi|322834934|ref|YP_004214961.1| porphobilinogen deaminase [Rahnella sp. Y9602] gi|321170135|gb|ADW75834.1| porphobilinogen deaminase [Rahnella sp. Y9602] Length = 313 Score = 288 bits (736), Expect = 8e-76, Method: Composition-based stats. Identities = 118/305 (38%), Positives = 171/305 (56%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A +S LM H P + ++P+ TKGD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAQYVQSRLMACH--PGLQVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+ SL D Sbjct: 59 KGLFVKELELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQYASLAD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L + R D+ + D RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPQGSIVGTSSLRRQCQLRQKRPDLMIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I L E+ P+ GQGA+ IE +++ ++L+ + H +T V ERA L Sbjct: 179 LENRITYALTPEECLPAVGQGAVGIECRLDDQTTRDLLAPLAHRETTLRVQAERAMNMRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G L+ +V A DG R G +A +G D A+ + Sbjct: 239 EGGCQVPIGSYAELEGDELWLRALVGAPDGSQMVCGERRGPAANAHRMGVDLAEELLANG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|127511252|ref|YP_001092449.1| porphobilinogen deaminase [Shewanella loihica PV-4] gi|126636547|gb|ABO22190.1| porphobilinogen deaminase [Shewanella loihica PV-4] Length = 317 Score = 288 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 171/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L H+ + ++P+STKGD I + L ++GG Sbjct: 9 MSQNVIRIATRKSPLAMWQAEFVKAELEKAHE--GLVVELLPMSTKGDVILDTPLAKVGG 66 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G+ D AVHS KD+P +GL + RED RD F+S+T +++++ Sbjct: 67 KGLFVKELEVAMLEGKADIAVHSMKDVPVDFPEGLGLQVICEREDPRDAFVSNTYKNIEE 126 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK Sbjct: 127 LPQGAIVGTSSLRRQCQIRAARPDLEIRDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLK 186 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++ ED P+ GQGA+ IE ++ + + L+ + H +T V ERA L Sbjct: 187 LEDRIASFISAEDSLPANGQGAVGIECRTDDERVKALLAPLEHIETRYRVIAERAMNTRL 246 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G TL G+V DG + +G + DA +G A + Sbjct: 247 EGGCQVPIGAYAEIDGDTLSLRGLVGNPDGSQVIRGTTSGAKQDAEQLGIALADELLSKG 306 Query: 301 NKNVFN 306 K + + Sbjct: 307 AKAILD 312 >gi|229520088|ref|ZP_04409516.1| porphobilinogen deaminase [Vibrio cholerae TM 11079-80] gi|229342876|gb|EEO07866.1| porphobilinogen deaminase [Vibrio cholerae TM 11079-80] Length = 317 Score = 288 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDAILDTPLAKVGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ +V DG G R A +G A+ + Sbjct: 245 QGGCQVPIGSYALLEGDHIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304 Query: 301 NKNVFN 306 K + Sbjct: 305 AKEILE 310 >gi|323495298|ref|ZP_08100379.1| porphobilinogen deaminase [Vibrio brasiliensis LMG 20546] gi|323310475|gb|EGA63658.1| porphobilinogen deaminase [Vibrio brasiliensis LMG 20546] Length = 312 Score = 288 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 170/306 (55%), Gaps = 3/306 (0%) Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++G Sbjct: 1 MTQTTPIRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T S+ Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNSID 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +V+GT SLRR+ + R D+ + + RG + TRL KL+ AI+LA AG+KRL Sbjct: 119 ELPQGAVVGTCSLRRQCQIKEARPDLIIKELRGNVGTRLGKLDAGDYDAIILAAAGLKRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E+ IK + E P+ GQGA+ IE +++ + +L++ +NH++T D V CERA Sbjct: 179 ELEERIKSFIEPEQSLPAVGQGAVGIECRLDDDRLIKLLEPLNHKETADRVLCERAMNLT 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I ++ G ++ +V DG G+R DA +G + A + Sbjct: 239 LEGGCQVPIGSYSLIDGDNIWLRALVGEPDGSKIVRGEIRGSRTDAEALGVELANQLLAD 298 Query: 300 SNKNVF 305 K + Sbjct: 299 GAKEIL 304 >gi|149191476|ref|ZP_01869725.1| porphobilinogen deaminase [Vibrio shilonii AK1] gi|148834664|gb|EDL51652.1| porphobilinogen deaminase [Vibrio shilonii AK1] Length = 329 Score = 288 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 111/307 (36%), Positives = 171/307 (55%), Gaps = 3/307 (0%) Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + +P RI TR SPLAL A + +L+ H P + ++ + TKGD I + L ++G Sbjct: 18 MTQTQPIRIATRKSPLALWQAHYVKDALIAAH--PGLEVELVTMVTKGDIILDTPLAKVG 75 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ Sbjct: 76 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYTNIS 135 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +V+GT SLRR+ L R D+ + + RG + TRL KL+N + AI+LA AG+KRL Sbjct: 136 ELPQGAVVGTCSLRRQCQLKEQRPDLVIKELRGNVGTRLGKLDNGEYDAIILAAAGLKRL 195 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E I+ + E+ P+ GQGA+ IE +++ + +L++ +NH +T D V CERA Sbjct: 196 ELESRIRSFIEPEESLPAVGQGAVGIECRLDDERLIKLLEPLNHTNTADRVLCERAMNLT 255 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I ++ G ++ +V DG G R DA +G A + Sbjct: 256 LEGGCQVPIGSYSLIDGDEIWLRALVGEPDGSKIVRGEIRGKRADAEALGVQLANQLLND 315 Query: 300 SNKNVFN 306 K + Sbjct: 316 GAKEILE 322 >gi|51594540|ref|YP_068731.1| porphobilinogen deaminase [Yersinia pseudotuberculosis IP 32953] gi|186893538|ref|YP_001870650.1| porphobilinogen deaminase [Yersinia pseudotuberculosis PB1/+] gi|61213379|sp|Q66G00|HEM3_YERPS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238059007|sp|B2K065|HEM3_YERPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|51587822|emb|CAH19424.1| porphobilinogen deaminase [Yersinia pseudotuberculosis IP 32953] gi|186696564|gb|ACC87193.1| porphobilinogen deaminase [Yersinia pseudotuberculosis PB1/+] Length = 313 Score = 288 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 118/305 (38%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + A RED RD F+S L D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVAICEREDPRDAFVSSHYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L Sbjct: 179 LETRIRYAMSAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G TL+ +V A DG R G +A +G + A + Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELADELLSRG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|254226598|ref|ZP_04920179.1| porphobilinogen deaminase [Vibrio cholerae V51] gi|125620870|gb|EAZ49223.1| porphobilinogen deaminase [Vibrio cholerae V51] Length = 317 Score = 288 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + P RI TR SPLAL A + +LM H P + ++ + T+GD I + L ++GG Sbjct: 7 MTETPIRIATRQSPLALWQANYVKDALMAAH--PGLQVELVTMVTRGDVILDTPLAKVGG 64 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++D Sbjct: 65 KGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIED 124 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ Sbjct: 125 LPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLE 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE V++ + + L+ +NH DT D V CERA L Sbjct: 185 LESRIRSFIEPEQSLPAVGQGAVGIECRVDDQRVRALLTPLNHADTADRVRCERAMNLTL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ +V DG G R A +G A+ + Sbjct: 245 QGGCQVPIGSYALLEGDHIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQG 304 Query: 301 NKNVFN 306 K + Sbjct: 305 AKEILE 310 >gi|269961540|ref|ZP_06175903.1| porphobilinogen deaminase [Vibrio harveyi 1DA3] gi|269833769|gb|EEZ87865.1| porphobilinogen deaminase [Vibrio harveyi 1DA3] Length = 312 Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 173/306 (56%), Gaps = 3/306 (0%) Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++G Sbjct: 1 MTQSTPIRIATRKSPLALWQAHYVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNID 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +V+GT SLRR+ L +R D+ + + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 ELPQGAVVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E+ I+ + E P+ GQGA+ IE V++ + +L++ +NH+DT D V CERA Sbjct: 179 ELEERIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHQDTADRVRCERAMNLT 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I ++ G ++ +V DG + G+R DA +G A + Sbjct: 239 LEGGCQVPIGSYSLLDGDNIWLRALVGEPDGSLIVRGEIRGHRNDAEALGVQLANELLEN 298 Query: 300 SNKNVF 305 +++ Sbjct: 299 GARDIL 304 >gi|251787830|ref|YP_003002551.1| porphobilinogen deaminase [Dickeya zeae Ech1591] gi|247536451|gb|ACT05072.1| porphobilinogen deaminase [Dickeya zeae Ech1591] Length = 322 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L D H P + ++P+ T+GD + + L ++GG Sbjct: 11 MVDTILRIATRQSPLALWQAHFVKQRLEDCH--PGLQVELVPMVTRGDVLLDTPLAKVGG 68 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + R+D RD F+S+ +L D Sbjct: 69 KGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYATLDD 128 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+ L +R D+ V D RG + TRL+KL+N AI+LA AG+KRL Sbjct: 129 LPEGACVGTSSLRRQCQLRAYRPDLVVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 188 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ L+ E P+ GQGA+ +E +++ + + L+ +NHEDT V ERA L Sbjct: 189 LAHRIRTALSPEQSLPAVGQGAVGVECRLDDARTRALLAPLNHEDTATRVLAERAMNTRL 248 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + TLY +V A DG R G+R DA +G A + Sbjct: 249 EGGCQVPIGSYAELQDETLYLRALVGAPDGSRIIYAERRGSRQDAETLGIALADELLERG 308 Query: 301 NKNVF 305 +++ Sbjct: 309 ARDIL 313 >gi|238798585|ref|ZP_04642061.1| Porphobilinogen deaminase [Yersinia mollaretii ATCC 43969] gi|238717541|gb|EEQ09381.1| Porphobilinogen deaminase [Yersinia mollaretii ATCC 43969] Length = 313 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S L D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSSHYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E+ P+ GQGA+ IE +++ ++L+ +NH DT V ERA L Sbjct: 179 LETRIRYAMPAEESLPAVGQGAVGIECRLDDDVTRQLLAPLNHRDTELRVCAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G L+ +V A DG R G +A +G + A + Sbjct: 239 EGGCQVPIGSYAELAGGELWLRALVGAPDGSEIIRGERRGPAENAEQMGIELADELLSRG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|167625822|ref|YP_001676116.1| porphobilinogen deaminase [Shewanella halifaxensis HAW-EB4] gi|189028156|sp|B0TJ54|HEM3_SHEHH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|167355844|gb|ABZ78457.1| porphobilinogen deaminase [Shewanella halifaxensis HAW-EB4] Length = 310 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 175/306 (57%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H+ + ++P+STKGD I + L ++GG Sbjct: 1 MSQNLIRIATRKSPLAMWQAEFVKAELEKIHE--GLTVELLPMSTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G+ D AVHS KD+P + +GL + RED RD F+S+T ++++D Sbjct: 59 KGLFVKELEVAMLEGKADIAVHSMKDVPVEFPEGLGLEVICEREDPRDAFVSNTYKTIED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ AI+LA AG+KRLK Sbjct: 119 LPQGAVVGTSSLRRQCQIRAARPDLVIKDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I ++ E P+ GQGA+ IE ++ + + L+ + H +T V ERA L Sbjct: 179 LEERIASFISAEQSLPANGQGAVGIECRTDDARVKALLAPLEHAETRMRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G TL G+V DG + +GN+ DA +G A+ + Sbjct: 239 EGGCQVPIGAYAEIDGDTLSLRGLVGNPDGSQIITAASSGNKADAEKLGVALAEELLAKG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKTILD 304 >gi|153835503|ref|ZP_01988170.1| porphobilinogen deaminase [Vibrio harveyi HY01] gi|156972662|ref|YP_001443569.1| porphobilinogen deaminase [Vibrio harveyi ATCC BAA-1116] gi|166217790|sp|A7MXU9|HEM3_VIBHB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|148867929|gb|EDL67139.1| porphobilinogen deaminase [Vibrio harveyi HY01] gi|156524256|gb|ABU69342.1| hypothetical protein VIBHAR_00314 [Vibrio harveyi ATCC BAA-1116] Length = 312 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 173/306 (56%), Gaps = 3/306 (0%) Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++G Sbjct: 1 MTQSTPIRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNID 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +V+GT SLRR+ L +R D+ + + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 ELPQGAVVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E+ I+ + E P+ GQGA+ IE V++ + +L++ +NH+DT D V CERA Sbjct: 179 ELEERIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHQDTADRVRCERAMNLT 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I ++ G ++ +V DG + G+R DA +G A + Sbjct: 239 LEGGCQVPIGSYSLLDGDNIWLRALVGEPDGSLIVRGEIRGHRNDAEALGVQLANELLEN 298 Query: 300 SNKNVF 305 +++ Sbjct: 299 GARDIL 304 >gi|109896672|ref|YP_659927.1| porphobilinogen deaminase [Pseudoalteromonas atlantica T6c] gi|123065108|sp|Q15Z15|HEM3_PSEA6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|109698953|gb|ABG38873.1| hydroxymethylbilane synthase [Pseudoalteromonas atlantica T6c] Length = 309 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 176/305 (57%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LA+ A ++ L++ H P + ++P+ST+GDRI + L +IGG Sbjct: 1 MSDRVIRIATRKSALAMWQAEYVQAKLLEAH--PQLKVELVPMSTQGDRILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E + G D AVHS KD+P G + RE+ D F+S+T S+++ Sbjct: 59 KGLFIKELEVAMSEGRADIAVHSMKDVPVDFPAGFGLHCICERENPYDAFVSNTYASIEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ + R D+++ D RG + TRL KL++ + AI+LA AG+ RL+ Sbjct: 119 LPQGAIVGTSSLRRQCQIRSARPDLTIRDLRGNVNTRLAKLDDGQYDAIILAAAGLIRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + IK + P+ GQGA+ IE ++ + EL+K +NH DT V ERA A+L Sbjct: 179 MQDRIKTYIEPTVSLPAVGQGAVGIECRNDDAELIELLKPLNHSDTESRVKAERAMNAKL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G LY G+V + DG + + + GN DA++IG D A+ + Sbjct: 239 NGGCQVPIGSYAVLNGDELYLRGLVGSPDGSVLLQAEKRGNVNDALSIGVDVAEQLLEKG 298 Query: 301 NKNVF 305 ++ Sbjct: 299 AGDIL 303 >gi|108806170|ref|YP_650086.1| porphobilinogen deaminase [Yersinia pestis Antiqua] gi|108810280|ref|YP_646047.1| porphobilinogen deaminase [Yersinia pestis Nepal516] gi|145600717|ref|YP_001164793.1| porphobilinogen deaminase [Yersinia pestis Pestoides F] gi|153949991|ref|YP_001399195.1| porphobilinogen deaminase [Yersinia pseudotuberculosis IP 31758] gi|153997095|ref|ZP_02022228.1| porphobilinogen deaminase [Yersinia pestis CA88-4125] gi|161484901|ref|NP_667719.2| porphobilinogen deaminase [Yersinia pestis KIM 10] gi|161511325|ref|NP_994488.2| porphobilinogen deaminase [Yersinia pestis biovar Microtus str. 91001] gi|165926233|ref|ZP_02222065.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str. F1991016] gi|165939151|ref|ZP_02227702.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str. IP275] gi|166011678|ref|ZP_02232576.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str. E1979001] gi|166213633|ref|ZP_02239668.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str. B42003004] gi|167401822|ref|ZP_02307310.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421084|ref|ZP_02312837.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426299|ref|ZP_02318052.1| porphobilinogen deaminase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470637|ref|ZP_02335341.1| porphobilinogen deaminase [Yersinia pestis FV-1] gi|218930852|ref|YP_002348727.1| porphobilinogen deaminase [Yersinia pestis CO92] gi|229837182|ref|ZP_04457347.1| hydroxymethylbilane synthase [Yersinia pestis Pestoides A] gi|229839542|ref|ZP_04459701.1| hydroxymethylbilane synthase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229900105|ref|ZP_04515242.1| hydroxymethylbilane synthase [Yersinia pestis biovar Orientalis str. India 195] gi|229900449|ref|ZP_04515578.1| hydroxymethylbilane synthase [Yersinia pestis Nepal516] gi|270488804|ref|ZP_06205878.1| hydroxymethylbilane synthase [Yersinia pestis KIM D27] gi|294505512|ref|YP_003569574.1| porphobilinogen deaminase [Yersinia pestis Z176003] gi|17380441|sp|P46355|HEM3_YERPE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|122979815|sp|Q1CBN1|HEM3_YERPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123373560|sp|Q1CNI3|HEM3_YERPN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|158514109|sp|A4TRA8|HEM3_YERPP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|167008820|sp|A7FD67|HEM3_YERP3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|108773928|gb|ABG16447.1| hydroxymethylbilane synthase [Yersinia pestis Nepal516] gi|108778083|gb|ABG12141.1| hydroxymethylbilane synthase [Yersinia pestis Antiqua] gi|115349463|emb|CAL22436.1| porphobilinogen deaminase [Yersinia pestis CO92] gi|145212413|gb|ABP41820.1| hydroxymethylbilane synthase [Yersinia pestis Pestoides F] gi|149289401|gb|EDM39479.1| porphobilinogen deaminase [Yersinia pestis CA88-4125] gi|152961486|gb|ABS48947.1| porphobilinogen deaminase [Yersinia pseudotuberculosis IP 31758] gi|165912924|gb|EDR31550.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str. IP275] gi|165921757|gb|EDR38954.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str. F1991016] gi|165989447|gb|EDR41748.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str. E1979001] gi|166205306|gb|EDR49786.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str. B42003004] gi|166961213|gb|EDR57234.1| porphobilinogen deaminase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048715|gb|EDR60123.1| porphobilinogen deaminase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054818|gb|EDR64622.1| porphobilinogen deaminase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229682468|gb|EEO78555.1| hydroxymethylbilane synthase [Yersinia pestis Nepal516] gi|229686885|gb|EEO78964.1| hydroxymethylbilane synthase [Yersinia pestis biovar Orientalis str. India 195] gi|229695908|gb|EEO85955.1| hydroxymethylbilane synthase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706125|gb|EEO92134.1| hydroxymethylbilane synthase [Yersinia pestis Pestoides A] gi|262363578|gb|ACY60299.1| porphobilinogen deaminase [Yersinia pestis D106004] gi|262367506|gb|ACY64063.1| porphobilinogen deaminase [Yersinia pestis D182038] gi|270337308|gb|EFA48085.1| hydroxymethylbilane synthase [Yersinia pestis KIM D27] gi|294355971|gb|ADE66312.1| porphobilinogen deaminase [Yersinia pestis Z176003] gi|320013550|gb|ADV97121.1| hydroxymethylbilane synthase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 313 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 117/305 (38%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L Sbjct: 179 LENRIRYAMSAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G TL+ +V A DG R G +A +G + A + Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELADELLSRG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|254490211|ref|ZP_05103401.1| porphobilinogen deaminase [Methylophaga thiooxidans DMS010] gi|224464558|gb|EEF80817.1| porphobilinogen deaminase [Methylophaga thiooxydans DMS010] Length = 309 Score = 287 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K+ RI TR SPLA+ A + SL+ +H P + ++ + T+GD I + L ++GG Sbjct: 1 MSKRTVRIATRNSPLAVWQAEFVKDSLLALH--PDLTVELVKMKTQGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P + +GL + RED D F+S+ Q++ D Sbjct: 59 KGLFVKELEQGMLDGRADIAVHSMKDVPVEFPEGLHLPVICKREDPHDAFVSNHYQTIDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+ R D+ V+ RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPHGARLGTSSLRRECQARTHRPDLEVLPLRGNVNTRLRKLDEGQFDAIILAMAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L E P+ GQGA+ IET +++ + L+ ++ T + ERA L Sbjct: 179 FDDRIRSALTPEQSLPAIGQGALGIETRIDDDEMNALIAPLHCPQTAIVLTAERALNRRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A +G ++ G+V DG G DA +G A+ + Sbjct: 239 SGGCQVPIAGYAMLEGDEVWLRGLVGRPDGTNTLYADVRGAAKDADKLGVQIAETLLTKG 298 Query: 301 NKNVF 305 + Sbjct: 299 ADKIL 303 >gi|307942602|ref|ZP_07657950.1| porphobilinogen deaminase [Roseibium sp. TrichSKD4] gi|307774241|gb|EFO33454.1| porphobilinogen deaminase [Roseibium sp. TrichSKD4] Length = 307 Score = 287 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 142/305 (46%), Positives = 197/305 (64%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ RIGTR S LALA A ETR LM H +P I+ + T GD+I +R L+E+GG Sbjct: 1 MQSTLLRIGTRGSQLALAQAHETRDRLMAAHGLPEDAFEIVVVKTSGDQIQDRPLSEVGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE L+ G +D AVHS+KDMPT L GL I+A+LPRED+RD FIS A++L+D Sbjct: 61 KGLFTKEIEDMLLDGSLDLAVHSSKDMPTVLPAGLDITAFLPREDVRDAFISPKAKTLRD 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+G+SSLRR+A++ R R DI V+ +RG ++TRL KL+ A LLA+AG+KRL Sbjct: 121 LPHGAVVGSSSLRRQAMVKRLRPDIDVVMYRGNVQTRLRKLDEGVVDATLLAHAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V+ ++ +DF P+ GQGAIC+E+ +++ K L+ IN +T + ERAFL L Sbjct: 181 LGDVVTSVIEADDFVPAVGQGAICLESRLDDEKTNGLLSAINDPETRVRLEAERAFLGVL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DG+C++ I G A G TL G++L DG HEV +G+ DA IG A + ++ + Sbjct: 241 DGTCRTPIGGLATVDGDTLTLKGVILKPDGSQMHEVEHSGSVQDAEAIGLAAGEELKSKA 300 Query: 301 NKNVF 305 N Sbjct: 301 GPNFL 305 >gi|162419364|ref|YP_001605129.1| porphobilinogen deaminase [Yersinia pestis Angola] gi|238059008|sp|A9R8K0|HEM3_YERPG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|162352179|gb|ABX86127.1| porphobilinogen deaminase [Yersinia pestis Angola] Length = 313 Score = 287 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 117/305 (38%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L Sbjct: 179 LENRIRYAMSAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G TL+ +V A DG R G +A +G + A + + Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELADELLSLG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|312884198|ref|ZP_07743909.1| porphobilinogen deaminase [Vibrio caribbenthicus ATCC BAA-2122] gi|309368126|gb|EFP95667.1| porphobilinogen deaminase [Vibrio caribbenthicus ATCC BAA-2122] Length = 312 Score = 287 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 111/304 (36%), Positives = 168/304 (55%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + P RI TR SPLAL A + +L+ H P + +I + TKGD I + L ++GGK Sbjct: 3 KSTPIRIATRKSPLALWQANYVKEALIKAH--PGLQVELITMVTKGDIILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P KGL + RED RD F+S+ Q++ L Sbjct: 61 GLFVKELENAMLEGRADLAVHSMKDVPVDFPKGLGLVTICEREDPRDAFVSNHYQNIDAL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++++GT SLRR+ + +R D+ V + RG + TRLNKL+ + AI+LA AG+KRL Sbjct: 121 PNNAIVGTCSLRRQCQIKEYRPDLIVKELRGNVGTRLNKLDAGEYDAIILAAAGLKRLGL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I L E P+ GQGA+ IE +++ + +L+ +N DT D V CERA L+ Sbjct: 181 ESRIASFLEPEQSLPAVGQGAVGIECRLDDQRLIDLLAPLNDRDTNDRVKCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I ++ +G ++ +V DG G R DA +G + A + Sbjct: 241 GGCQVPIGSYSVLEGEQIWLRALVGEPDGSQMVRGEIRGKRDDAEQLGIELANQLLDKGA 300 Query: 302 KNVF 305 +++ Sbjct: 301 RDIL 304 >gi|332304814|ref|YP_004432665.1| porphobilinogen deaminase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172143|gb|AEE21397.1| porphobilinogen deaminase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 309 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 174/305 (57%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LA+ A ++ L++ H P + ++P+ST+GDRI + L +IGG Sbjct: 1 MSDRVIRIATRKSTLAMWQAEYVQAKLLEAH--PQLKVELVPMSTQGDRILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E + G D AVHS KD+P G + RE+ D F+S+T ++++ Sbjct: 59 KGLFIKELEIAMSEGRADIAVHSMKDVPVDFPDGFGLHCICERENPYDAFVSNTYSAIEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+++ D RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPQGAVVGTSSLRRQCQIRSARPDLTIRDLRGNVNTRLAKLDEGQYDAIILAAAGLIRLN 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ IK + P+ GQGA+ IE ++ + EL+K +NH DT V ERA A+L Sbjct: 179 MQERIKAYIEPTVSLPAVGQGAVGIECRNDDAELIELLKPLNHADTESRVKAERAMNAKL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G LY G+V + DG + + + G+ DA +IG D A+ + Sbjct: 239 NGGCQVPIGSYAVLNGDELYLRGLVGSPDGSLLLQAEKRGSINDAQSIGIDVAEQLLEKG 298 Query: 301 NKNVF 305 ++ Sbjct: 299 AGDIL 303 >gi|194438640|ref|ZP_03070728.1| porphobilinogen deaminase [Escherichia coli 101-1] gi|194422444|gb|EDX38443.1| porphobilinogen deaminase [Escherichia coli 101-1] Length = 318 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|254163746|ref|YP_003046854.1| porphobilinogen deaminase [Escherichia coli B str. REL606] gi|242379335|emb|CAQ34146.1| hydroxymethylbilane synthase [Escherichia coli BL21(DE3)] gi|253975647|gb|ACT41318.1| porphobilinogen deaminase [Escherichia coli B str. REL606] gi|253979803|gb|ACT45473.1| porphobilinogen deaminase [Escherichia coli BL21(DE3)] gi|323959059|gb|EGB54728.1| porphobilinogen deaminase [Escherichia coli H489] gi|323969355|gb|EGB64654.1| porphobilinogen deaminase [Escherichia coli TA007] Length = 313 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|271502386|ref|YP_003335412.1| porphobilinogen deaminase [Dickeya dadantii Ech586] gi|270345941|gb|ACZ78706.1| porphobilinogen deaminase [Dickeya dadantii Ech586] Length = 312 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H P + ++P+ T+GD + + L ++GG Sbjct: 1 MVDTILRIATRQSPLALWQAHFVQQRLEACH--PGLRVELVPMVTRGDVLLDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + R+D RD F+S+ +L D Sbjct: 59 KGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNNYATLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+ L R D+ V D RG + TRL+KL+N AI+LA AG+KRL Sbjct: 119 LPEGACVGTSSLRRQCQLRAHRPDLVVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L+ E P+ GQGA+ +E +++ + + L+ +NH+DT V ERA L Sbjct: 179 LENRIRTALSPEQSLPAVGQGAVGVECRLDDARTRALLAPLNHDDTATRVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + TLY +V A DG R G R DA +G A + Sbjct: 239 EGGCQVPIGSYAELQDDTLYLRALVGAPDGSRIIYAERRGPRQDAEALGIGLADELLERG 298 Query: 301 NKNVF 305 +++ Sbjct: 299 ARDIL 303 >gi|253690341|ref|YP_003019531.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259646261|sp|C6DHC2|HEM3_PECCP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|251756919|gb|ACT14995.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 313 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 119/305 (39%), Positives = 170/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG Sbjct: 1 MLANIIRIATRQSPLALWQARYVQQCL--NHLYPDLHVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL+ Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNRYDSLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+KRL Sbjct: 119 LPEGSCVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLAKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ L+ E+ P+ GQGAI IE +N+ + ++L+ +NH T V ERA L Sbjct: 179 LEERIRCALSPEESLPAVGQGAIGIECRLNDDRIRQLLAPLNHPATAARVQAERAMNVRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G TL+ +V A DG R GN DA IG A+ + Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIVGERRGNVSDAEQIGIALAEELLAKG 298 Query: 301 NKNVF 305 + Sbjct: 299 ASAIL 303 >gi|163803631|ref|ZP_02197496.1| porphobilinogen deaminase [Vibrio sp. AND4] gi|159172579|gb|EDP57439.1| porphobilinogen deaminase [Vibrio sp. AND4] Length = 312 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 173/306 (56%), Gaps = 3/306 (0%) Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++G Sbjct: 1 MTQSTPIRIATRKSPLALWQAHFVKDALQSAH--PGLEVELVTMVTKGDIILDTPLAKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T ++ Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPIDFPDGLGLVTICEREDPRDAFVSNTYNNID 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL +V+GT SLRR+ L +R D+ + + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 DLPQGAVVGTCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E+ I+ + E P+ GQGA+ IE +++ + ++L++ +NH DT D V CERA Sbjct: 179 ELEERIRSFIEPEQSLPAVGQGAVGIECRIDDERLRKLLEPLNHRDTADRVRCERAMNLT 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I ++ G ++ +V DG + +G+R DA +G A + Sbjct: 239 LEGGCQVPIGSYSLLDGDNIWLRALVGEPDGSLIVRGEIHGHRNDAEALGVQLANELLAN 298 Query: 300 SNKNVF 305 +++ Sbjct: 299 GARDIL 304 >gi|157833452|pdb|1PDA|A Chain A, Structure Of Porphobilinogen Deaminase Reveals A Flexible Multidomain Polymerase With A Single Catalytic Site gi|41664|emb|CAA27813.1| unnamed protein product [Escherichia coli] Length = 313 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G+C+ I +A ++ G+V A DG R G DA +G A+ + Sbjct: 239 EGACQVPIGSYAELIDGEIWLRGLVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|328472411|gb|EGF43277.1| porphobilinogen deaminase [Vibrio parahaemolyticus 10329] Length = 312 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 171/306 (55%), Gaps = 3/306 (0%) Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++G Sbjct: 1 MTQSTPIRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T S+ Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSSID 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 ELPQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 K E I+ + E P+ GQGA+ IE V++ + +L++ +NH+DT D V CERA Sbjct: 179 KLEDRIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHKDTADRVLCERAMNLT 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I +A +G ++ +V DG G+R D +G A + Sbjct: 239 LEGGCQVPIGSYALLEGDEIWLRALVGEPDGSEIVRGEVRGHRKDGEALGIQLANELLDN 298 Query: 300 SNKNVF 305 +++ Sbjct: 299 GARDIL 304 >gi|28899762|ref|NP_799367.1| porphobilinogen deaminase [Vibrio parahaemolyticus RIMD 2210633] gi|153838754|ref|ZP_01991421.1| porphobilinogen deaminase [Vibrio parahaemolyticus AQ3810] gi|260365170|ref|ZP_05777735.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus K5030] gi|260878130|ref|ZP_05890485.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AN-5034] gi|260895813|ref|ZP_05904309.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus Peru-466] gi|260900854|ref|ZP_05909249.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AQ4037] gi|32363175|sp|Q87KI9|HEM3_VIBPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|28808014|dbj|BAC61251.1| porphobilinogen deaminase [Vibrio parahaemolyticus RIMD 2210633] gi|149747840|gb|EDM58724.1| porphobilinogen deaminase [Vibrio parahaemolyticus AQ3810] gi|308087192|gb|EFO36887.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus Peru-466] gi|308092784|gb|EFO42479.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AN-5034] gi|308110595|gb|EFO48135.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AQ4037] gi|308111033|gb|EFO48573.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus K5030] Length = 312 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 171/306 (55%), Gaps = 3/306 (0%) Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + P RI TR SPLAL A + +L H P + ++ + TKGD I + L ++G Sbjct: 1 MTQSTPIRIATRKSPLALWQAHFVKDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSNIN 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 ELPQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 K E I+ + E P+ GQGA+ IE V++ + +L++ +NH+DT D V CERA Sbjct: 179 KLEDRIRSFIEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHKDTADRVLCERAMNLT 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I +A +G ++ +V DG G+R D +G A + Sbjct: 239 LEGGCQVPIGSYALLEGDEIWLRALVGEPDGSEIVRGEVRGHRKDGEALGIQLANELLDS 298 Query: 300 SNKNVF 305 +++ Sbjct: 299 GARDIL 304 >gi|170026227|ref|YP_001722732.1| porphobilinogen deaminase [Yersinia pseudotuberculosis YPIII] gi|238059009|sp|B1JPE6|HEM3_YERPY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|169752761|gb|ACA70279.1| porphobilinogen deaminase [Yersinia pseudotuberculosis YPIII] Length = 313 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 117/305 (38%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYTHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++ E+ P+ GQGA+ IE +++ ++L+ +NH T V ERA L Sbjct: 179 LENRIRYAMSAEESLPAVGQGAVGIECRLDDGHTRQLLAPLNHRHTELRVCAERAMNIRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G TL+ +V A DG R G +A +G + A + Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELADELLSRG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|218701284|ref|YP_002408913.1| porphobilinogen deaminase [Escherichia coli IAI39] gi|226740634|sp|B7NTE0|HEM3_ECO7I RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|218371270|emb|CAR19104.1| hydroxymethylbilane synthase [Escherichia coli IAI39] Length = 313 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|170680193|ref|YP_001746121.1| porphobilinogen deaminase [Escherichia coli SMS-3-5] gi|170517911|gb|ACB16089.1| porphobilinogen deaminase [Escherichia coli SMS-3-5] Length = 318 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +SL Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYESLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|307140503|ref|ZP_07499859.1| porphobilinogen deaminase [Escherichia coli H736] Length = 318 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|323964049|gb|EGB59539.1| porphobilinogen deaminase [Escherichia coli M863] gi|327250654|gb|EGE62360.1| porphobilinogen deaminase [Escherichia coli STEC_7v] Length = 313 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +N+ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLNDTRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|49176416|ref|YP_026260.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr. MG1655] gi|89110215|ref|AP_003995.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr. W3110] gi|170083288|ref|YP_001732608.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr. DH10B] gi|238902882|ref|YP_002928678.1| hydroxymethylbilane synthase [Escherichia coli BW2952] gi|256026151|ref|ZP_05440016.1| porphobilinogen deaminase [Escherichia sp. 4_1_40B] gi|312971913|ref|ZP_07786087.1| porphobilinogen deaminase [Escherichia coli 1827-70] gi|2506504|sp|P06983|HEM3_ECOLI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|229836108|sp|B1XAH2|HEM3_ECODH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|259647795|sp|C4ZZ69|HEM3_ECOBW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|4388845|pdb|2YPN|A Chain A, Hydroxymethylbilane Synthase gi|28373294|pdb|1GTK|A Chain A, Time-Resolved And Static-Ensemble Structural Chemistry Of Hydroxymethylbilane Synthase gi|41666|emb|CAA31132.1| unnamed protein product [Escherichia coli] gi|48994974|gb|AAT48218.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr. MG1655] gi|85676246|dbj|BAE77496.1| hydroxymethylbilane synthase [Escherichia coli str. K12 substr. W3110] gi|169891123|gb|ACB04830.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr. DH10B] gi|238861470|gb|ACR63468.1| hydroxymethylbilane synthase [Escherichia coli BW2952] gi|309704240|emb|CBJ03588.1| porphobilinogen deaminase [Escherichia coli ETEC H10407] gi|310334290|gb|EFQ00495.1| porphobilinogen deaminase [Escherichia coli 1827-70] gi|315618498|gb|EFU99084.1| porphobilinogen deaminase [Escherichia coli 3431] gi|323934193|gb|EGB30624.1| porphobilinogen deaminase [Escherichia coli E1520] gi|323938941|gb|EGB35160.1| porphobilinogen deaminase [Escherichia coli E482] gi|332345783|gb|AEE59117.1| porphobilinogen deaminase HemC [Escherichia coli UMNK88] Length = 313 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|320197614|gb|EFW72226.1| Porphobilinogen deaminase [Escherichia coli WV_060327] Length = 318 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|187776117|ref|ZP_02800653.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4196] gi|188025006|ref|ZP_02775407.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4113] gi|189010242|ref|ZP_02805709.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4076] gi|189401833|ref|ZP_02778707.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4401] gi|189403100|ref|ZP_02793091.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4486] gi|189404376|ref|ZP_02788935.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4501] gi|189404861|ref|ZP_02811648.2| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC869] gi|208806069|ref|ZP_03248406.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4206] gi|208812922|ref|ZP_03254251.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4045] gi|208819553|ref|ZP_03259873.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4042] gi|209396873|ref|YP_002273321.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4115] gi|217324566|ref|ZP_03440650.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. TW14588] gi|261225578|ref|ZP_05939859.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. FRIK2000] gi|261255624|ref|ZP_05948157.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. FRIK966] gi|187768841|gb|EDU32685.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4196] gi|188015439|gb|EDU53561.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4113] gi|189001539|gb|EDU70525.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4076] gi|189359021|gb|EDU77440.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4401] gi|189362764|gb|EDU81183.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4486] gi|189365984|gb|EDU84400.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4501] gi|189373238|gb|EDU91654.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC869] gi|208725870|gb|EDZ75471.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4206] gi|208734199|gb|EDZ82886.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4045] gi|208739676|gb|EDZ87358.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4042] gi|209158273|gb|ACI35706.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4115] gi|217320787|gb|EEC29211.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. TW14588] gi|320191103|gb|EFW65753.1| Porphobilinogen deaminase [Escherichia coli O157:H7 str. EC1212] gi|320666093|gb|EFX33107.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. LSU-61] gi|326344260|gb|EGD68020.1| Porphobilinogen deaminase [Escherichia coli O157:H7 str. 1125] gi|326347912|gb|EGD71626.1| Porphobilinogen deaminase [Escherichia coli O157:H7 str. 1044] Length = 318 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|227114730|ref|ZP_03828386.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 313 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 117/305 (38%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG Sbjct: 1 MLANIIRIATRQSPLALWQARYVQQCL--NHLYPDLHVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNHYDSLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S +GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPQGSCVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L+ E+ P+ GQGAI IE +++ + L+ +NH T V ERA L Sbjct: 179 LEARIRCALSPEESLPAVGQGAIGIECRLDDEHVRHLLAPLNHPATAARVLAERAMNVRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G TL+ +V A DG R GN DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIVGERKGNVSDAEQLGIALAEELLAKG 298 Query: 301 NKNVF 305 + Sbjct: 299 ASAIL 303 >gi|168801133|ref|ZP_02826140.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC508] gi|195938092|ref|ZP_03083474.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC4024] gi|218707439|ref|YP_002414958.1| porphobilinogen deaminase [Escherichia coli UMN026] gi|254795801|ref|YP_003080638.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. TW14359] gi|293413246|ref|ZP_06655908.1| porphobilinogen deaminase [Escherichia coli B354] gi|298383172|ref|ZP_06992766.1| hydroxymethylbilane synthase [Escherichia coli FVEC1302] gi|331665450|ref|ZP_08366349.1| hydroxymethylbilane synthase [Escherichia coli TA143] gi|23821693|sp|Q8XAP3|HEM3_ECO57 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226740636|sp|B7NFA7|HEM3_ECOLU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189376679|gb|EDU95095.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. EC508] gi|218434536|emb|CAR15462.1| hydroxymethylbilane synthase [Escherichia coli UMN026] gi|254595201|gb|ACT74562.1| hydroxymethylbilane synthase [Escherichia coli O157:H7 str. TW14359] gi|284923908|emb|CBG37007.1| porphobilinogen deaminase [Escherichia coli 042] gi|291468194|gb|EFF10691.1| porphobilinogen deaminase [Escherichia coli B354] gi|298276408|gb|EFI17927.1| hydroxymethylbilane synthase [Escherichia coli FVEC1302] gi|320639287|gb|EFX08909.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. G5101] gi|320644672|gb|EFX13722.1| porphobilinogen deaminase [Escherichia coli O157:H- str. 493-89] gi|320649997|gb|EFX18500.1| porphobilinogen deaminase [Escherichia coli O157:H- str. H 2687] gi|320655343|gb|EFX23285.1| porphobilinogen deaminase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|323974386|gb|EGB69514.1| porphobilinogen deaminase [Escherichia coli TW10509] gi|331057348|gb|EGI29337.1| hydroxymethylbilane synthase [Escherichia coli TA143] Length = 313 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|332998254|gb|EGK17856.1| porphobilinogen deaminase [Shigella flexneri K-272] gi|333013794|gb|EGK33157.1| porphobilinogen deaminase [Shigella flexneri K-227] Length = 313 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|253775572|ref|YP_003038403.1| porphobilinogen deaminase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|300930031|ref|ZP_07145463.1| porphobilinogen deaminase [Escherichia coli MS 187-1] gi|253326616|gb|ACT31218.1| porphobilinogen deaminase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|300462064|gb|EFK25557.1| porphobilinogen deaminase [Escherichia coli MS 187-1] Length = 320 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|204930376|ref|ZP_03221353.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204320780|gb|EDZ05982.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 320 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 160/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D Sbjct: 66 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDD 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERHPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L Sbjct: 186 LESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG + R G+ A +G A+ + Sbjct: 246 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 305 Query: 301 NKNVF 305 + + Sbjct: 306 ARAIL 310 >gi|193067963|ref|ZP_03048928.1| porphobilinogen deaminase [Escherichia coli E110019] gi|192958583|gb|EDV89021.1| porphobilinogen deaminase [Escherichia coli E110019] Length = 318 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|323161134|gb|EFZ47052.1| porphobilinogen deaminase [Escherichia coli E128010] Length = 313 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTHELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G +A +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|312969469|ref|ZP_07783671.1| porphobilinogen deaminase [Escherichia coli 2362-75] gi|312286016|gb|EFR13934.1| porphobilinogen deaminase [Escherichia coli 2362-75] Length = 313 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|254230107|ref|ZP_04923503.1| porphobilinogen deaminase [Vibrio sp. Ex25] gi|262392880|ref|YP_003284734.1| porphobilinogen deaminase [Vibrio sp. Ex25] gi|151937352|gb|EDN56214.1| porphobilinogen deaminase [Vibrio sp. Ex25] gi|262336474|gb|ACY50269.1| porphobilinogen deaminase [Vibrio sp. Ex25] Length = 312 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 171/306 (55%), Gaps = 3/306 (0%) Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++G Sbjct: 1 MTQSTPIRIATRKSPLALWQAYFVKDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSNID 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 ELPQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 K E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA Sbjct: 179 KLEERIRSFIEPEQSLPAVGQGAVGIECRLDDERLLKLLEPLNHQDTVDRVLCERAMNLT 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I +A G ++ +V DG G+R D +G A + Sbjct: 239 LEGGCQVPIGSYALLDGDNIWLRALVGEPDGSEIVRGEIRGHRKDGEALGVQLANELLDN 298 Query: 300 SNKNVF 305 + + Sbjct: 299 GAREIL 304 >gi|170769870|ref|ZP_02904323.1| porphobilinogen deaminase [Escherichia albertii TW07627] gi|170121308|gb|EDS90239.1| porphobilinogen deaminase [Escherichia albertii TW07627] Length = 313 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMTSH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +N+ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRTALPPEVSLPAVGQGAVGIECRLNDTRTRELLAALNHNETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G+ DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELVDGEIWLRALVGAPDGSQIIRGERRGSPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|194434066|ref|ZP_03066336.1| porphobilinogen deaminase [Shigella dysenteriae 1012] gi|194417724|gb|EDX33823.1| porphobilinogen deaminase [Shigella dysenteriae 1012] gi|320176046|gb|EFW51115.1| Porphobilinogen deaminase [Shigella dysenteriae CDC 74-1112] Length = 318 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|157163278|ref|YP_001460596.1| porphobilinogen deaminase [Escherichia coli HS] gi|170022172|ref|YP_001727126.1| porphobilinogen deaminase [Escherichia coli ATCC 8739] gi|188494806|ref|ZP_03002076.1| porphobilinogen deaminase [Escherichia coli 53638] gi|254039017|ref|ZP_04873068.1| porphobilinogen deaminase [Escherichia sp. 1_1_43] gi|300950432|ref|ZP_07164354.1| porphobilinogen deaminase [Escherichia coli MS 116-1] gi|300955191|ref|ZP_07167588.1| porphobilinogen deaminase [Escherichia coli MS 175-1] gi|301646129|ref|ZP_07246029.1| porphobilinogen deaminase [Escherichia coli MS 146-1] gi|331644538|ref|ZP_08345658.1| hydroxymethylbilane synthase [Escherichia coli H736] gi|157068958|gb|ABV08213.1| porphobilinogen deaminase [Escherichia coli HS] gi|169757100|gb|ACA79799.1| porphobilinogen deaminase [Escherichia coli ATCC 8739] gi|188490005|gb|EDU65108.1| porphobilinogen deaminase [Escherichia coli 53638] gi|226838708|gb|EEH70736.1| porphobilinogen deaminase [Escherichia sp. 1_1_43] gi|260451352|gb|ACX41774.1| porphobilinogen deaminase [Escherichia coli DH1] gi|300317908|gb|EFJ67692.1| porphobilinogen deaminase [Escherichia coli MS 175-1] gi|300450239|gb|EFK13859.1| porphobilinogen deaminase [Escherichia coli MS 116-1] gi|301075655|gb|EFK90461.1| porphobilinogen deaminase [Escherichia coli MS 146-1] gi|315138381|dbj|BAJ45540.1| porphobilinogen deaminase [Escherichia coli DH1] gi|331036210|gb|EGI08445.1| hydroxymethylbilane synthase [Escherichia coli H736] Length = 320 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|291285218|ref|YP_003502036.1| Porphobilinogen deaminase [Escherichia coli O55:H7 str. CB9615] gi|209753314|gb|ACI74964.1| adenylate cyclase [Escherichia coli] gi|290765091|gb|ADD59052.1| Porphobilinogen deaminase [Escherichia coli O55:H7 str. CB9615] Length = 320 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + GL + RED RD F+S+ SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPHGLGLVTICEREDPRDAFVSNNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|149908497|ref|ZP_01897159.1| porphobilinogen deaminase [Moritella sp. PE36] gi|149808331|gb|EDM68268.1| porphobilinogen deaminase [Moritella sp. PE36] Length = 312 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H+ + +IP+ TKGD I + L ++GG Sbjct: 1 MATETLRIATRKSPLAMWQAEYVKARLEAIHQ--NLTVELIPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P + +GL + RED RD F+S+T + +++ Sbjct: 59 KGLFVKELEVAILENRADIAVHSMKDVPVEFPEGLDLEVICEREDPRDAFVSNTYRQIEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ L R D+ ++D RG + TRLNKL+N AI+LA AG+KRL Sbjct: 119 LPPGAIVGTCSLRRQCQLSEARPDLKIMDLRGNVNTRLNKLDNKDYDAIILAAAGLKRLD 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I + E P+ GQGA+ IE +++ + + L+ +NH T D V ERA L Sbjct: 179 MEYRIASYIEPEQSLPAVGQGAVGIECRIDDERVKALLAPLNHALTSDRVLAERAMNLAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G L+ G+V DG G+R +A +G + A + Sbjct: 239 EGGCQVPIGSYAIIDGDELWLRGLVGKPDGTEVIRAEIRGDRKNARQLGLELADKLLAQG 298 Query: 301 NKNVF 305 K + Sbjct: 299 AKEIL 303 >gi|205354497|ref|YP_002228298.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205274278|emb|CAR39298.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326629631|gb|EGE35974.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 318 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D Sbjct: 64 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDD 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L Sbjct: 184 LEPRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG + R G+ A +G A+ + Sbjct: 244 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 303 Query: 301 NKNVF 305 + + Sbjct: 304 ARAIL 308 >gi|269964925|ref|ZP_06179095.1| porphobilinogen deaminase [Vibrio alginolyticus 40B] gi|269830401|gb|EEZ84625.1| porphobilinogen deaminase [Vibrio alginolyticus 40B] Length = 312 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 170/306 (55%), Gaps = 3/306 (0%) Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++G Sbjct: 1 MTQSTPIRIATRKSPLALWQAYFVKDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + Sbjct: 59 GKGLFVKELEIAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSHID 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 ELPQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 K E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA Sbjct: 179 KLEERIRSFIEPEQSLPAVGQGAVGIECRLDDERLLKLLEPLNHQDTVDRVLCERAMNLT 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I +A G ++ +V DG G+R D +G A + Sbjct: 239 LEGGCQVPIGSYALLDGDNIWLRALVGEPDGSEIVRGEIRGHRKDGEALGVQLANELLDN 298 Query: 300 SNKNVF 305 + + Sbjct: 299 GAREIL 304 >gi|191174267|ref|ZP_03035776.1| porphobilinogen deaminase [Escherichia coli F11] gi|190905450|gb|EDV65080.1| porphobilinogen deaminase [Escherichia coli F11] Length = 318 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|331660148|ref|ZP_08361084.1| hydroxymethylbilane synthase [Escherichia coli TA206] gi|320185465|gb|EFW60234.1| Porphobilinogen deaminase [Shigella flexneri CDC 796-83] gi|331052716|gb|EGI24751.1| hydroxymethylbilane synthase [Escherichia coli TA206] gi|332084681|gb|EGI89869.1| porphobilinogen deaminase [Shigella boydii 5216-82] gi|332084931|gb|EGI90113.1| porphobilinogen deaminase [Shigella dysenteriae 155-74] Length = 313 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|293407432|ref|ZP_06651352.1| porphobilinogen deaminase [Escherichia coli FVEC1412] gi|291425543|gb|EFE98581.1| porphobilinogen deaminase [Escherichia coli FVEC1412] Length = 313 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESHIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|261823396|ref|YP_003261502.1| porphobilinogen deaminase [Pectobacterium wasabiae WPP163] gi|261607409|gb|ACX89895.1| porphobilinogen deaminase [Pectobacterium wasabiae WPP163] Length = 313 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 118/305 (38%), Positives = 172/305 (56%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG Sbjct: 1 MLANIIRIATRQSPLALWQARYVQQRL--NHLYPDLSVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNHYDSLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S +GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPQGSCVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ L+ E+ P+ GQGAI IE +++ + ++L+ +NH DT V ERA L Sbjct: 179 LEERIRCALSPEESLPAVGQGAIGIECRLDDDRIRQLLAPLNHTDTAARVLAERAMNVRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G+TL+ +V A DG R G+ DA IG A+ + Sbjct: 239 EGGCQVPIGSYAELEGNTLWLRALVGAPDGSQMIVGERKGSVVDAEKIGIALAEELLAKG 298 Query: 301 NKNVF 305 + Sbjct: 299 ASAIL 303 >gi|306815158|ref|ZP_07449311.1| porphobilinogen deaminase [Escherichia coli NC101] gi|34222567|sp|Q8FBP1|HEM3_ECOL6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|222035503|emb|CAP78248.1| Porphobilinogen deaminase [Escherichia coli LF82] gi|305851527|gb|EFM51981.1| porphobilinogen deaminase [Escherichia coli NC101] gi|312948358|gb|ADR29185.1| porphobilinogen deaminase [Escherichia coli O83:H1 str. NRG 857C] Length = 313 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|56461658|ref|YP_156939.1| porphobilinogen deaminase [Idiomarina loihiensis L2TR] gi|61213262|sp|Q5QUS3|HEM3_IDILO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|56180668|gb|AAV83390.1| Porphobilinogen deaminase [Idiomarina loihiensis L2TR] Length = 313 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 103/305 (33%), Positives = 164/305 (53%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ RI TR S LAL A + L ++H P ++ ++P+STKGD I + L +IGG Sbjct: 1 MTQR-VRIATRKSKLALWQAEHIQQRLEELH--PGLSVELVPMSTKGDVILDTPLAKIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + GL++ RED RD F+S+ ++L + Sbjct: 58 KGLFVKELEVAMLEGRADIAVHSMKDLPVEFPPGLELHTICEREDPRDAFVSNNYKNLNE 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT SLRR+ + + + D RG ++TRL KL+ + AI+LA +G+ RL+ Sbjct: 118 LPEGAVVGTCSLRRRCQVKEQFPHLVIKDLRGNVQTRLRKLDEGEFDAIILAASGLIRLE 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I + +E P+ GQGA+ IE ++ + + L+ + ++T V ERA L Sbjct: 178 LGDRITSFIPVEQSLPANGQGALGIECRSDDDEMKALLAPLQCQETRTRVLAERAMNRGL 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DG C+ I +A +G +Y G+V DG G A +G + A+ + Sbjct: 238 DGGCQVPIGAYAELEGDEVYLRGLVGEPDGGKVLRDEVRGPASKAEELGSELAERLLKQG 297 Query: 301 NKNVF 305 + Sbjct: 298 AAEIL 302 >gi|62182409|ref|YP_218826.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|167553883|ref|ZP_02347627.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168244626|ref|ZP_02669558.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263173|ref|ZP_02685146.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467648|ref|ZP_02701485.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194442426|ref|YP_002043172.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197247501|ref|YP_002148864.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|213029666|ref|ZP_03344113.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213416718|ref|ZP_03349862.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213425401|ref|ZP_03358151.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213649584|ref|ZP_03379637.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213865139|ref|ZP_03387258.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|62130042|gb|AAX67745.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|194401089|gb|ACF61311.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|195630016|gb|EDX48676.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197211204|gb|ACH48601.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205321788|gb|EDZ09627.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205336530|gb|EDZ23294.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205348255|gb|EDZ34886.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|322716902|gb|EFZ08473.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 320 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D Sbjct: 66 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDD 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L Sbjct: 186 LESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG + R G+ A +G A+ + Sbjct: 246 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 305 Query: 301 NKNVF 305 + + Sbjct: 306 ARAIL 310 >gi|16767209|ref|NP_462824.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194449507|ref|YP_002047954.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|207859144|ref|YP_002245795.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|6960263|gb|AAF33453.1| 89% identity with E. coli porphobilinogen deaminase (HEMC) (SP:P06983); contains similarity to Pfam family PF01379 (Porphobilinogen deaminase), score=627.8, E=6.2e-185, N=1 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16422502|gb|AAL22783.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194407811|gb|ACF68030.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|206710947|emb|CAR35314.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261249062|emb|CBG26922.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996216|gb|ACY91101.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160454|emb|CBW19983.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|320088349|emb|CBY98109.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|323132286|gb|ADX19716.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326625658|gb|EGE32003.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332990774|gb|AEF09757.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 318 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D Sbjct: 64 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDD 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L Sbjct: 184 LESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG + R G+ A +G A+ + Sbjct: 244 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 303 Query: 301 NKNVF 305 + + Sbjct: 304 ARAIL 308 >gi|16762196|ref|NP_457813.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143685|ref|NP_807027.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415793|ref|YP_152868.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194734788|ref|YP_002116870.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197264899|ref|ZP_03164973.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197301061|ref|ZP_02663450.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197364723|ref|YP_002144360.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243181|ref|YP_002217871.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205358019|ref|ZP_02574964.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205360118|ref|ZP_02834695.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|224585757|ref|YP_002639556.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238912944|ref|ZP_04656781.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289825622|ref|ZP_06544800.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|61225723|sp|P0A1Q8|HEM3_SALTY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|61225724|sp|P0A1Q9|HEM3_SALTI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|81599707|sp|Q5PKL7|HEM3_SALPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226706297|sp|B5FN93|HEM3_SALDC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238059000|sp|B5BIU8|HEM3_SALPK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238059001|sp|B4TNV3|HEM3_SALSV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800257|sp|C0Q3B3|HEM3_SALPC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|25292188|pir||AD0920 porphobilinogen deaminase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504500|emb|CAD09382.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi] gi|29139320|gb|AAO70887.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56130050|gb|AAV79556.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194710290|gb|ACF89511.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197096200|emb|CAR61796.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197243154|gb|EDY25774.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197288774|gb|EDY28149.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197937697|gb|ACH75030.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205328154|gb|EDZ14918.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205340974|gb|EDZ27738.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|224470285|gb|ACN48115.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|312915057|dbj|BAJ39031.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225457|gb|EFX50514.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322613018|gb|EFY09969.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617394|gb|EFY14294.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625614|gb|EFY22436.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627037|gb|EFY23830.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631247|gb|EFY28010.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638280|gb|EFY34979.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642784|gb|EFY39371.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646974|gb|EFY43476.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650361|gb|EFY46774.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656348|gb|EFY52642.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657573|gb|EFY53843.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665984|gb|EFY62165.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666723|gb|EFY62900.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671034|gb|EFY67164.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322679259|gb|EFY75311.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681663|gb|EFY77690.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686010|gb|EFY81998.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192636|gb|EFZ77864.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196502|gb|EFZ81652.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203746|gb|EFZ88767.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205379|gb|EFZ90353.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210748|gb|EFZ95624.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215916|gb|EGA00649.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221409|gb|EGA05827.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227573|gb|EGA11729.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231758|gb|EGA15869.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236173|gb|EGA20250.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239590|gb|EGA23638.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244314|gb|EGA28322.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249589|gb|EGA33501.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250319|gb|EGA34205.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256526|gb|EGA40257.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259776|gb|EGA43409.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265184|gb|EGA48682.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268387|gb|EGA51859.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 313 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D Sbjct: 59 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L Sbjct: 179 LESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG + R G+ A +G A+ + Sbjct: 239 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARAIL 303 >gi|15804393|ref|NP_290433.1| porphobilinogen deaminase [Escherichia coli O157:H7 EDL933] gi|15833989|ref|NP_312762.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. Sakai] gi|300900647|ref|ZP_07118805.1| porphobilinogen deaminase [Escherichia coli MS 198-1] gi|301025752|ref|ZP_07189267.1| porphobilinogen deaminase [Escherichia coli MS 69-1] gi|331655487|ref|ZP_08356480.1| hydroxymethylbilane synthase [Escherichia coli M718] gi|331675273|ref|ZP_08376024.1| hydroxymethylbilane synthase [Escherichia coli TA280] gi|12518669|gb|AAG58997.1|AE005611_7 porphobilinogen deaminase = hydroxymethylbilane synthase [Escherichia coli O157:H7 str. EDL933] gi|13364211|dbj|BAB38158.1| porphobilinogen deaminase [Escherichia coli O157:H7 str. Sakai] gi|209753308|gb|ACI74961.1| adenylate cyclase [Escherichia coli] gi|209753310|gb|ACI74962.1| adenylate cyclase [Escherichia coli] gi|209753312|gb|ACI74963.1| adenylate cyclase [Escherichia coli] gi|209753316|gb|ACI74965.1| adenylate cyclase [Escherichia coli] gi|300355863|gb|EFJ71733.1| porphobilinogen deaminase [Escherichia coli MS 198-1] gi|300395875|gb|EFJ79413.1| porphobilinogen deaminase [Escherichia coli MS 69-1] gi|320660969|gb|EFX28412.1| porphobilinogen deaminase [Escherichia coli O55:H7 str. USDA 5905] gi|331046808|gb|EGI18892.1| hydroxymethylbilane synthase [Escherichia coli M718] gi|331067559|gb|EGI38963.1| hydroxymethylbilane synthase [Escherichia coli TA280] Length = 320 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|300939977|ref|ZP_07154605.1| porphobilinogen deaminase [Escherichia coli MS 21-1] gi|300455181|gb|EFK18674.1| porphobilinogen deaminase [Escherichia coli MS 21-1] Length = 320 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYESLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|86148167|ref|ZP_01066465.1| porphobilinogen deaminase [Vibrio sp. MED222] gi|218710949|ref|YP_002418570.1| porphobilinogen deaminase [Vibrio splendidus LGP32] gi|254800262|sp|B7VMD9|HEM3_VIBSL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|85834014|gb|EAQ52174.1| porphobilinogen deaminase [Vibrio sp. MED222] gi|218323968|emb|CAV20330.1| Porphobilinogen deaminase [Vibrio splendidus LGP32] Length = 312 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 173/306 (56%), Gaps = 3/306 (0%) Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++G Sbjct: 1 MTNSAPIRIATRKSPLALWQAYFVRDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNID 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +V+GT SLRR+ LL +R D+ + + RG + TRL KL++ + AI+LA AG+KRL Sbjct: 119 ELPQGAVVGTCSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA Sbjct: 179 ELEERIRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLT 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I ++ G ++ +V DG +G R DA +G A + Sbjct: 239 LEGGCQVPIGSYSLLDGDNIWLRALVGEPDGSKMVRGEISGLRKDAEALGVTLANQLLDD 298 Query: 300 SNKNVF 305 + + Sbjct: 299 GAREIL 304 >gi|193065671|ref|ZP_03046736.1| porphobilinogen deaminase [Escherichia coli E22] gi|194429243|ref|ZP_03061771.1| porphobilinogen deaminase [Escherichia coli B171] gi|192926638|gb|EDV81267.1| porphobilinogen deaminase [Escherichia coli E22] gi|194412755|gb|EDX29049.1| porphobilinogen deaminase [Escherichia coli B171] gi|320198489|gb|EFW73090.1| Porphobilinogen deaminase [Escherichia coli EC4100B] Length = 318 Score = 285 bits (728), Expect = 6e-75, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G +A +G A+ + Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|200388118|ref|ZP_03214730.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199605216|gb|EDZ03761.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 320 Score = 285 bits (728), Expect = 6e-75, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D Sbjct: 66 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDD 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L Sbjct: 186 LESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG + R G+ A +G A+ + Sbjct: 246 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVIVRGERRGSPEQAEQMGISLAEELLENG 305 Query: 301 NKNVF 305 + + Sbjct: 306 ARAIL 310 >gi|209921277|ref|YP_002295361.1| porphobilinogen deaminase [Escherichia coli SE11] gi|218556364|ref|YP_002389278.1| porphobilinogen deaminase [Escherichia coli IAI1] gi|218697519|ref|YP_002405186.1| porphobilinogen deaminase [Escherichia coli 55989] gi|256021454|ref|ZP_05435319.1| porphobilinogen deaminase [Shigella sp. D9] gi|260846422|ref|YP_003224200.1| hydroxymethylbilane synthase HemC [Escherichia coli O103:H2 str. 12009] gi|260857792|ref|YP_003231683.1| hydroxymethylbilane synthase HemC [Escherichia coli O26:H11 str. 11368] gi|260870527|ref|YP_003236929.1| hydroxymethylbilane synthase HemC [Escherichia coli O111:H- str. 11128] gi|293417268|ref|ZP_06659893.1| porphobilinogen deaminase [Escherichia coli B185] gi|293468119|ref|ZP_06664531.1| porphobilinogen deaminase [Escherichia coli B088] gi|331670648|ref|ZP_08371485.1| hydroxymethylbilane synthase [Escherichia coli TA271] gi|226706285|sp|B6I4E0|HEM3_ECOSE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226740635|sp|B7M603|HEM3_ECO8A RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800249|sp|B7L959|HEM3_ECO55 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|209914536|dbj|BAG79610.1| porphobilinogen deaminase [Escherichia coli SE11] gi|218354251|emb|CAV00923.1| hydroxymethylbilane synthase [Escherichia coli 55989] gi|218363133|emb|CAR00774.1| hydroxymethylbilane synthase [Escherichia coli IAI1] gi|257756441|dbj|BAI27943.1| hydroxymethylbilane synthase HemC [Escherichia coli O26:H11 str. 11368] gi|257761569|dbj|BAI33066.1| hydroxymethylbilane synthase HemC [Escherichia coli O103:H2 str. 12009] gi|257766883|dbj|BAI38378.1| hydroxymethylbilane synthase HemC [Escherichia coli O111:H- str. 11128] gi|291321497|gb|EFE60935.1| porphobilinogen deaminase [Escherichia coli B088] gi|291431036|gb|EFF04031.1| porphobilinogen deaminase [Escherichia coli B185] gi|323155206|gb|EFZ41390.1| porphobilinogen deaminase [Escherichia coli EPECa14] gi|323182576|gb|EFZ67980.1| porphobilinogen deaminase [Escherichia coli 1357] gi|323380839|gb|ADX53107.1| porphobilinogen deaminase [Escherichia coli KO11] gi|323943796|gb|EGB39891.1| porphobilinogen deaminase [Escherichia coli H120] gi|324115735|gb|EGC09670.1| porphobilinogen deaminase [Escherichia coli E1167] gi|331062121|gb|EGI34043.1| hydroxymethylbilane synthase [Escherichia coli TA271] Length = 313 Score = 285 bits (728), Expect = 6e-75, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G +A +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|119776386|ref|YP_929126.1| porphobilinogen deaminase [Shewanella amazonensis SB2B] gi|119768886|gb|ABM01457.1| Hydroxymethylbilane synthase [Shewanella amazonensis SB2B] Length = 326 Score = 285 bits (728), Expect = 7e-75, Method: Composition-based stats. Identities = 115/306 (37%), Positives = 172/306 (56%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG Sbjct: 17 MSQNLIRIATRKSPLAMWQAEFVKAELERIH--PDLTVELLPMSTKGDVILDTPLAKVGG 74 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T +S+ + Sbjct: 75 KGLFVKELEVAMLEGRADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNTYKSIDE 134 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + D RG + TRL KL++ + AI+LA AG+ RLK Sbjct: 135 LPQGAVVGTSSLRRQCQLRARRPDLIIKDLRGNVGTRLAKLDSGEYDAIILAAAGLIRLK 194 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++ E+ P+ GQGA+ IE N+ + + L+ + H++T V ERA L Sbjct: 195 LAERIAGFISTEESLPANGQGAVGIECRTNDERVKALLAPLEHKETRLRVLAERAMNTRL 254 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA + TL G+V DG S G+ DAI +G A + Sbjct: 255 EGGCQVPIGAFAEIEADTLTLRGLVGNPDGSEVITGSVTGSTADAIALGHQLADDLLSRG 314 Query: 301 NKNVFN 306 K + + Sbjct: 315 AKTILD 320 >gi|218560868|ref|YP_002393781.1| porphobilinogen deaminase [Escherichia coli S88] gi|218692081|ref|YP_002400293.1| porphobilinogen deaminase [Escherichia coli ED1a] gi|226740633|sp|B7MH66|HEM3_ECO45 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800250|sp|B7N295|HEM3_ECO81 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|218367637|emb|CAR05420.1| hydroxymethylbilane synthase [Escherichia coli S88] gi|218429645|emb|CAR10466.1| hydroxymethylbilane synthase [Escherichia coli ED1a] gi|323949314|gb|EGB45204.1| porphobilinogen deaminase [Escherichia coli H252] gi|323954009|gb|EGB49807.1| porphobilinogen deaminase [Escherichia coli H263] Length = 313 Score = 285 bits (728), Expect = 7e-75, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICKREDPRDAFVSNTYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|215489131|ref|YP_002331562.1| porphobilinogen deaminase [Escherichia coli O127:H6 str. E2348/69] gi|215267203|emb|CAS11651.1| hydroxymethylbilane synthase HemC [Escherichia coli O127:H6 str. E2348/69] Length = 320 Score = 285 bits (728), Expect = 7e-75, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|161505549|ref|YP_001572661.1| porphobilinogen deaminase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189028154|sp|A9MJ10|HEM3_SALAR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|160866896|gb|ABX23519.1| hypothetical protein SARI_03714 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 313 Score = 285 bits (728), Expect = 7e-75, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 159/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +I TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLKIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL D Sbjct: 59 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNQYHSLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ L E P+ GQGAI IE +++ + L+ +NH T V ERA L Sbjct: 179 LASRIRTALPPEVSLPAVGQGAIGIECRLDDARTHALLAPLNHPQTALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG + R G+ A +G A+ + Sbjct: 239 EGGCQVPIGSYAEIFNGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARAIL 303 >gi|85711585|ref|ZP_01042643.1| Porphobilinogen deaminase [Idiomarina baltica OS145] gi|85694737|gb|EAQ32677.1| Porphobilinogen deaminase [Idiomarina baltica OS145] Length = 310 Score = 285 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 103/305 (33%), Positives = 158/305 (51%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR S LA+ A ++ L ++ P I ++P+ST+GD I + L +IGG Sbjct: 1 MS-KTVRIATRKSKLAMWQAEHIQARLASLY--PELTIELVPMSTRGDIILDTPLAKIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + GL++ ED RD F+S+ QSL + Sbjct: 58 KGLFVKELEAAMLEGRADLAVHSMKDLPVEFPPGLELHTICESEDPRDAFVSNHYQSLNE 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT SLRR+ + + + D RG ++TRL KL+ + AI+LA +G+ RL+ Sbjct: 118 LPEGAVVGTCSLRRRCQVKERFPHLIINDLRGNVQTRLRKLDEGQFDAIILAASGLIRLE 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I + +ED P+ GQG + IE ++ + + L++ + T V ERA L Sbjct: 178 LGERITSFIPVEDSLPANGQGVLGIEVRSDDDEIKALLEPLQCPTTRFRVLAERAMNRRL 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I FA G L G+V DG G A +G + A+ + Sbjct: 238 QGGCQVPIGAFAVVDGDHLSLRGLVGDPDGVEVIREEIQGPVEQAEALGIELAEKLLARG 297 Query: 301 NKNVF 305 + Sbjct: 298 AGEIL 302 >gi|148204|gb|AAA67601.1| porphobilinogen deaminase [Escherichia coli str. K-12 substr. MG1655] Length = 320 Score = 285 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDXPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLGERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAGLPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGRPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|59727198|gb|AAW92125.1| hydroxymethylbilane synthase [Enterobacter asburiae] Length = 313 Score = 285 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 161/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKQRLEACHS--GLRVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPKGSVVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH++T V ERA L Sbjct: 179 LESRIRVALPPELSLPAVGQGAVGIECRLDDARTRELLAPLNHDETAIRVKAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A L+ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELTEGELWLRALVGAPDGSQMVRGERRGKAQDAEQLGVSLAEELLDNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|82546156|ref|YP_410103.1| porphobilinogen deaminase [Shigella boydii Sb227] gi|300904058|ref|ZP_07121938.1| porphobilinogen deaminase [Escherichia coli MS 84-1] gi|301303699|ref|ZP_07209820.1| porphobilinogen deaminase [Escherichia coli MS 124-1] gi|81247567|gb|ABB68275.1| porphobilinogen deaminase [Shigella boydii Sb227] gi|300403938|gb|EFJ87476.1| porphobilinogen deaminase [Escherichia coli MS 84-1] gi|300840999|gb|EFK68759.1| porphobilinogen deaminase [Escherichia coli MS 124-1] gi|315254168|gb|EFU34136.1| porphobilinogen deaminase [Escherichia coli MS 85-1] gi|315296783|gb|EFU56075.1| porphobilinogen deaminase [Escherichia coli MS 16-3] Length = 320 Score = 285 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|288550563|ref|ZP_06391088.1| hydroxymethylbilane synthase [Enterobacter cancerogenus ATCC 35316] gi|288314627|gb|EFC53565.1| hydroxymethylbilane synthase [Enterobacter cancerogenus ATCC 35316] Length = 318 Score = 285 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 162/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKQRLEACHS--GLRVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + R+D RD F+S+ SL Sbjct: 64 KGLFVKELELALLENRADIAVHSMKDVPVEFPQGLGLVTICERDDPRDAFVSNHYDSLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + + SV+GTSSLRR+ L R D+ + RG + TRL KL+N + AI+LA AG+KRL Sbjct: 124 MPVGSVVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLGKLDNGEYDAIILAVAGLKRLD 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + + L+ +NH+DT V ERA L Sbjct: 184 LESRIRVALPPEFSLPAVGQGAVGIECRLDDDRTRALLAPLNHDDTAIRVKAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A L+ +V A DG R G DA +G A+ + Sbjct: 244 EGGCQVPIGSYAELSNGELWLRALVGAPDGSQMVRGERRGKPQDAEALGVSLAEELLNNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|191166073|ref|ZP_03027908.1| porphobilinogen deaminase [Escherichia coli B7A] gi|190903849|gb|EDV63563.1| porphobilinogen deaminase [Escherichia coli B7A] Length = 313 Score = 285 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHKTALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G +A +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|332534414|ref|ZP_08410254.1| porphobilinogen deaminase [Pseudoalteromonas haloplanktis ANT/505] gi|332036148|gb|EGI72623.1| porphobilinogen deaminase [Pseudoalteromonas haloplanktis ANT/505] Length = 312 Score = 284 bits (727), Expect = 9e-75, Method: Composition-based stats. Identities = 108/307 (35%), Positives = 166/307 (54%), Gaps = 4/307 (1%) Query: 1 MEKKP--FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M +K RI TR S LAL A ++ L H + ++P+ST+GD I + L +I Sbjct: 1 MTEKTKLVRIATRKSALALWQAEFVKAELERFHA--DVRVELVPMSTQGDIILDTPLAKI 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLF +E+E+ ++ G D AVHS KD+P + +GL + RED RD F+S+ +L Sbjct: 59 GGKGLFVKELEQAMLDGRADIAVHSMKDVPVEFPQGLALHTICEREDPRDAFVSNNFANL 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L +++GTSSLRR+ + R D+ + D RG + TRL KL++ + AI+LA AG+ R Sbjct: 119 SALPQGAIVGTSSLRRQCQIKALRPDLDIRDLRGNVNTRLGKLDDGQYDAIILAAAGLIR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L+ E I + + E P+ GQGA+ IE +++ + L+ + H T VN ER+ Sbjct: 179 LEMESRIADYIEPEVSLPANGQGAVGIECRIDDEVTKALLAPLEHTQTRIRVNAERSMNR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+G C+ I +A G ++ G+V A DG G+ DA IG + A+ + Sbjct: 239 YLEGGCQVPIGAYALVDGEQVHLRGLVGAVDGSEILRDEVTGHVNDAEKIGIELAKKLLA 298 Query: 299 ISNKNVF 305 + Sbjct: 299 QGADKIL 305 >gi|26250543|ref|NP_756583.1| porphobilinogen deaminase [Escherichia coli CFT073] gi|110644128|ref|YP_671858.1| porphobilinogen deaminase [Escherichia coli 536] gi|227888613|ref|ZP_04006418.1| hydroxymethylbilane synthase [Escherichia coli 83972] gi|300979364|ref|ZP_07174522.1| porphobilinogen deaminase [Escherichia coli MS 200-1] gi|300985714|ref|ZP_07177569.1| porphobilinogen deaminase [Escherichia coli MS 45-1] gi|301047316|ref|ZP_07194402.1| porphobilinogen deaminase [Escherichia coli MS 185-1] gi|26110973|gb|AAN83157.1|AE016769_272 Porphobilinogen deaminase [Escherichia coli CFT073] gi|110345720|gb|ABG71957.1| porphobilinogen deaminase [Escherichia coli 536] gi|227834452|gb|EEJ44918.1| hydroxymethylbilane synthase [Escherichia coli 83972] gi|300300835|gb|EFJ57220.1| porphobilinogen deaminase [Escherichia coli MS 185-1] gi|300308036|gb|EFJ62556.1| porphobilinogen deaminase [Escherichia coli MS 200-1] gi|300407988|gb|EFJ91526.1| porphobilinogen deaminase [Escherichia coli MS 45-1] gi|307555929|gb|ADN48704.1| porphobilinogen deaminase [Escherichia coli ABU 83972] gi|315293155|gb|EFU52507.1| porphobilinogen deaminase [Escherichia coli MS 153-1] gi|324007476|gb|EGB76695.1| porphobilinogen deaminase [Escherichia coli MS 57-2] gi|324014708|gb|EGB83927.1| porphobilinogen deaminase [Escherichia coli MS 60-1] Length = 320 Score = 284 bits (727), Expect = 9e-75, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|315178740|gb|ADT85654.1| porphobilinogen deaminase [Vibrio furnissii NCTC 11218] Length = 312 Score = 284 bits (727), Expect = 9e-75, Method: Composition-based stats. Identities = 110/304 (36%), Positives = 167/304 (54%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 P RI TR SPLAL A + +L H P + ++ + T+GD I + L ++GGK Sbjct: 3 STTPIRIATRQSPLALWQAHFVKDALQAAH--PGLEVELVTMVTRGDVILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T SL +L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYASLDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +++GT SLRR+ L R D+ + + RG + TRL KL+ + AI+LA AG+KRLK Sbjct: 121 PHGAIVGTCSLRRQCQLKEARPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I+ ++ E P+ GQGA+ IE +++ + + L+ ++ DT D V CERA L+ Sbjct: 181 EQRIRSLIEPEQSLPAVGQGAVGIECRLDDARLRALLAPLSDADTTDRVLCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I +A G L+ +V DG G R DA +G + A + Sbjct: 241 GGCQVPIGSYALLDGDDLWLRALVGEPDGSHIVRGEIRGPRQDAERLGVELANQLLADGA 300 Query: 302 KNVF 305 +++ Sbjct: 301 RDIL 304 >gi|160877198|ref|YP_001556514.1| porphobilinogen deaminase [Shewanella baltica OS195] gi|189028155|sp|A9L5G0|HEM3_SHEB9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|160862720|gb|ABX51254.1| porphobilinogen deaminase [Shewanella baltica OS195] gi|315269402|gb|ADT96255.1| porphobilinogen deaminase [Shewanella baltica OS678] Length = 310 Score = 284 bits (727), Expect = 9e-75, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 170/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +S+ + Sbjct: 59 KGLFVKELEVAMLDDLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+ + R D+ + D RG + TRL KL+N + AI+LA AG+ RLK Sbjct: 119 LPLGATVGTSSLRRQCQIRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++ E+ P+ GQGA+ IE +N+ + + L+ + H +T V ERA L Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRINDERVKALLAPLEHLETRYRVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA G + G+V DG E G + DA +G A+ + Sbjct: 239 EGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTDATQLGVALAEELLSKG 298 Query: 301 NKNVFN 306 K++ + Sbjct: 299 AKSILD 304 >gi|157156845|ref|YP_001465286.1| porphobilinogen deaminase [Escherichia coli E24377A] gi|300818726|ref|ZP_07098933.1| porphobilinogen deaminase [Escherichia coli MS 107-1] gi|300823336|ref|ZP_07103467.1| porphobilinogen deaminase [Escherichia coli MS 119-7] gi|300921486|ref|ZP_07137834.1| porphobilinogen deaminase [Escherichia coli MS 115-1] gi|300923304|ref|ZP_07139352.1| porphobilinogen deaminase [Escherichia coli MS 182-1] gi|301328438|ref|ZP_07221519.1| porphobilinogen deaminase [Escherichia coli MS 78-1] gi|307313621|ref|ZP_07593241.1| porphobilinogen deaminase [Escherichia coli W] gi|331679912|ref|ZP_08380575.1| hydroxymethylbilane synthase [Escherichia coli H591] gi|332282690|ref|ZP_08395103.1| porphobilinogen deaminase [Shigella sp. D9] gi|157078875|gb|ABV18583.1| porphobilinogen deaminase [Escherichia coli E24377A] gi|300411603|gb|EFJ94913.1| porphobilinogen deaminase [Escherichia coli MS 115-1] gi|300420390|gb|EFK03701.1| porphobilinogen deaminase [Escherichia coli MS 182-1] gi|300524122|gb|EFK45191.1| porphobilinogen deaminase [Escherichia coli MS 119-7] gi|300528692|gb|EFK49754.1| porphobilinogen deaminase [Escherichia coli MS 107-1] gi|300845148|gb|EFK72908.1| porphobilinogen deaminase [Escherichia coli MS 78-1] gi|306906602|gb|EFN37114.1| porphobilinogen deaminase [Escherichia coli W] gi|315063097|gb|ADT77424.1| hydroxymethylbilane synthase [Escherichia coli W] gi|324016226|gb|EGB85445.1| porphobilinogen deaminase [Escherichia coli MS 117-3] gi|331072459|gb|EGI43791.1| hydroxymethylbilane synthase [Escherichia coli H591] gi|332105042|gb|EGJ08388.1| porphobilinogen deaminase [Shigella sp. D9] Length = 320 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G +A +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|83643194|ref|YP_431629.1| porphobilinogen deaminase [Hahella chejuensis KCTC 2396] gi|123753698|sp|Q2SQ70|HEM3_HAHCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|83631237|gb|ABC27204.1| porphobilinogen deaminase [Hahella chejuensis KCTC 2396] Length = 311 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 162/306 (52%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K+ I TR S LAL A + L +H P + ++ L+TKGD I + L ++GG Sbjct: 1 MPKQHLVIATRQSALALWQAEHVKQRLEALH--PGLTVELLGLTTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + GL + A L RE D F+S+ SL + Sbjct: 59 KGLFVKELETAMLEGRADIAVHSMKDVPMEFPPGLGLGAILERETPMDAFVSNQYASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ ++ RG + TRL KL+ AI+LA +G+KRL Sbjct: 119 LPEGAVVGTSSLRRQCQLSERRPDLKILSLRGNVNTRLAKLDAGDFDAIILAASGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+E L E P+ GQGA+ IE +++P+A L+ + +T V+ ERA L Sbjct: 179 FSGRIREELTPEVSLPAVGQGALGIECRLDDPEAMALIAQLQDAETTARVSAERAMNHRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A G + G+V + DG G A +G + A+ + Sbjct: 239 QGGCQVPIAGYAEITGDQMRLRGLVGSPDGAQVLRDEVEGPVAAAEALGTELAERLLQQG 298 Query: 301 NKNVFN 306 + Sbjct: 299 AGKILE 304 >gi|157144433|ref|YP_001451752.1| porphobilinogen deaminase [Citrobacter koseri ATCC BAA-895] gi|157081638|gb|ABV11316.1| hypothetical protein CKO_00147 [Citrobacter koseri ATCC BAA-895] Length = 318 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +L+ H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDALIAQH--PGLVVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ +L + Sbjct: 64 KGLFVKELEVALLEKRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNQYNNLDE 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ L E P+ GQGA+ IE +++ + Q L+ +NHE+T V ERA L Sbjct: 184 LTSRIRTALPPEISLPAVGQGAVGIECRLDDARTQALLAPLNHEETALRVKAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 EGGCQVPIGSYAEIIDGEVWLRALVGAPDGSQMIRGERRGLPQDAAQMGISLAEELLANG 303 Query: 301 NKNVF 305 + + Sbjct: 304 ARAIL 308 >gi|84393564|ref|ZP_00992318.1| porphobilinogen deaminase [Vibrio splendidus 12B01] gi|84375843|gb|EAP92736.1| porphobilinogen deaminase [Vibrio splendidus 12B01] Length = 312 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 172/306 (56%), Gaps = 3/306 (0%) Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++G Sbjct: 1 MTNSAPIRIATRKSPLALWQAYFVRDALQAAH--PGLEVELVTMVTKGDIILDTPLAKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E ++ G D AVHS KD+P KGL + RED RD F+S+T ++ Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPKGLGLVTICEREDPRDAFVSNTYNNID 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L + +GT SLRR+ LL +R D+ + + RG + TRL KL++ + AI+LA AG+KRL Sbjct: 119 ELPQGAAVGTCSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA Sbjct: 179 ELEERIRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLT 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I ++ G ++ +V DG +G R DA +G A + Sbjct: 239 LEGGCQVPIGSYSLLDGDNIWLRALVGEPDGSKMVRGEISGLRKDAEALGVTLANQLLDD 298 Query: 300 SNKNVF 305 + + Sbjct: 299 GAREIL 304 >gi|91227534|ref|ZP_01261871.1| porphobilinogen deaminase [Vibrio alginolyticus 12G01] gi|91188558|gb|EAS74850.1| porphobilinogen deaminase [Vibrio alginolyticus 12G01] Length = 312 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 170/306 (55%), Gaps = 3/306 (0%) Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + P RI TR SPLAL A+ + +L H P + ++ + TKGD I + L ++G Sbjct: 1 MTQSTPIRIATRKSPLALWQAYFVKDALQAAH--PSLEVELVTMVTKGDVILDTPLAKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T + Sbjct: 59 GKGLFVKELEIAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSHID 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +V+GT SLRR+ L +R DI + + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 ELPQGAVVGTCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 K E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA Sbjct: 179 KLEERIRSFIEPEQSLPAVGQGAVGIECRLDDERLLKLLEPLNHQDTVDRVLCERAMNLT 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I +A G ++ +V DG G+R D +G A + Sbjct: 239 LEGGCQVPIGSYALLDGDNIWLRALVGEPDGSEIVRGEIRGHRKDGEALGVQLANELLDN 298 Query: 300 SNKNVF 305 + + Sbjct: 299 GAREIL 304 >gi|331685522|ref|ZP_08386106.1| hydroxymethylbilane synthase [Escherichia coli H299] gi|331077223|gb|EGI48437.1| hydroxymethylbilane synthase [Escherichia coli H299] Length = 313 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG + R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSLIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|91213326|ref|YP_543312.1| porphobilinogen deaminase [Escherichia coli UTI89] gi|117626062|ref|YP_859385.1| porphobilinogen deaminase [Escherichia coli APEC O1] gi|237702812|ref|ZP_04533293.1| porphobilinogen deaminase [Escherichia sp. 3_2_53FAA] gi|91074900|gb|ABE09781.1| porphobilinogen deaminase [Escherichia coli UTI89] gi|115515186|gb|ABJ03261.1| porphobilinogen deaminase [Escherichia coli APEC O1] gi|226902983|gb|EEH89242.1| porphobilinogen deaminase [Escherichia sp. 3_2_53FAA] gi|294490567|gb|ADE89323.1| porphobilinogen deaminase [Escherichia coli IHE3034] gi|307628866|gb|ADN73170.1| porphobilinogen deaminase [Escherichia coli UM146] gi|315284723|gb|EFU44168.1| porphobilinogen deaminase [Escherichia coli MS 110-3] Length = 320 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+T SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICKREDPRDAFVSNTYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|260767548|ref|ZP_05876484.1| porphobilinogen deaminase [Vibrio furnissii CIP 102972] gi|260617448|gb|EEX42631.1| porphobilinogen deaminase [Vibrio furnissii CIP 102972] Length = 312 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 109/304 (35%), Positives = 167/304 (54%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 P RI TR SPLAL A + +L H P + ++ + T+GD I + L ++GGK Sbjct: 3 STTPIRIATRQSPLALWQAHFVKDALQAAH--PGLEVELVTMVTRGDVILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T SL +L Sbjct: 61 GLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYASLDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +++GT SLRR+ L R D+ + + RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 121 PHGAIVGTCSLRRQCQLKEARPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLQL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I+ ++ E P+ GQGA+ IE +++ + + L+ ++ DT D V CERA L+ Sbjct: 181 EQRIRSLIEPEQSLPAVGQGAVGIECRLDDARLRALLAPLSDADTTDRVLCERAMNLTLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I +A G L+ +V DG G R DA +G + A + Sbjct: 241 GGCQVPIGSYALLDGDDLWLRALVGEPDGSHIVRGEIRGPRQDAERLGVELANQLLADGA 300 Query: 302 KNVF 305 +++ Sbjct: 301 RDIL 304 >gi|24375795|ref|NP_719838.1| porphobilinogen deaminase [Shewanella oneidensis MR-1] gi|39931562|sp|Q8E9H0|HEM3_SHEON RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|24350743|gb|AAN57282.1|AE015863_11 porphobilinogen deaminase [Shewanella oneidensis MR-1] Length = 310 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 170/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ + D AVHS KD+P +GL + RED RD F+S+ +S+ + Sbjct: 59 KGLFVKELEVAMLEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNIYKSISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+ RLK Sbjct: 119 LPLGATVGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++ E+ P+ GQGA+ IE N+ + + L+ + H +T V ERA L Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA G + G+V DG E G + +A +G A+ + Sbjct: 239 EGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTEATQLGVALAEELLSKG 298 Query: 301 NKNVFN 306 K++ + Sbjct: 299 AKSILD 304 >gi|157834325|pdb|1YPN|A Chain A, Reduced Form Hydroxymethylbilane Synthase (K59q Mutant) Crystal Structure After 2 Hours In A Flow Cell Determined By Time-Resolved Laue Diffraction Length = 313 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 +GLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 QGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|330908104|gb|EGH36623.1| porphobilinogen deaminase [Escherichia coli AA86] Length = 318 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 64 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 184 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG + R G DA +G A+ + Sbjct: 244 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSLIIRGERRGAPQDAEQMGISLAEELLNNG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AREIL 308 >gi|242237686|ref|YP_002985867.1| porphobilinogen deaminase [Dickeya dadantii Ech703] gi|242129743|gb|ACS84045.1| porphobilinogen deaminase [Dickeya dadantii Ech703] Length = 313 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 162/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H P + ++P+ T+GD + + L ++GG Sbjct: 1 MVDNILRIATRQSPLALWQAHYVQQRLQACH--PGLRVELVPMVTRGDVLLDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + L + R+D RD F+S+ +L Sbjct: 59 KGLFVKELELALLEDRADIAVHSMKDVPVEFPAQLGLVTICERDDPRDAFVSNRYANLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+ RL Sbjct: 119 LPPGAVVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLGKLDNGDYDAIILAVAGLNRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L+ E P+ GQGA+ +E +++ + + L+ +NH+DT V ERA L Sbjct: 179 LEGRIRAALSPEQSLPAVGQGAVGVECRLDDTRTRALLAPLNHDDTAARVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G ++ +V + DG R G R DA +G A + Sbjct: 239 EGGCQVPIGSYAELQGDAIWLRALVGSPDGSRIIRGERTGRRQDAEQLGISLADELLAAG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|323167552|gb|EFZ53258.1| porphobilinogen deaminase [Shigella sonnei 53G] Length = 313 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G +A +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAKQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|309796256|ref|ZP_07690666.1| porphobilinogen deaminase [Escherichia coli MS 145-7] gi|308120138|gb|EFO57400.1| porphobilinogen deaminase [Escherichia coli MS 145-7] Length = 320 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHKTALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G +A +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|281180853|dbj|BAI57183.1| porphobilinogen deaminase [Escherichia coli SE15] Length = 313 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG + R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSLIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|50123108|ref|YP_052275.1| porphobilinogen deaminase [Pectobacterium atrosepticum SCRI1043] gi|55976381|sp|Q6CZG3|HEM3_ERWCT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|49613634|emb|CAG77085.1| porphobilinogen deaminase [Pectobacterium atrosepticum SCRI1043] Length = 313 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 118/305 (38%), Positives = 171/305 (56%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG Sbjct: 1 MLANIIRIATRQSPLALWQARYVQQCL--NHFYPDLHVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL+ Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNRYDSLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+KRL Sbjct: 119 LPEGSCVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLAKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ L+ E+ P+ GQGAI IE +++ + ++L+ +NH DT V ERA L Sbjct: 179 LEERIRCALSPEESLPAVGQGAIGIECRLDDDRIRQLLAPLNHTDTAARVLAERAMNVRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G TL+ +V A DG R G+ DA IG A+ + Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIVGERKGSVSDAEKIGVALAEELLAKG 298 Query: 301 NKNVF 305 + Sbjct: 299 ASAIL 303 >gi|296105312|ref|YP_003615458.1| hydroxymethylbilane synthase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059771|gb|ADF64509.1| hydroxymethylbilane synthase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 313 Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 161/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKQRLEACHS--GLRVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQFDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPKGSVVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH++T V ERA L Sbjct: 179 LESRIRVALPPELSLPAVGQGAVGIECRLDDRRTRELLAPLNHDETAIRVKAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A L+ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELINGELWLRALVGAPDGSQMVRGERRGKPQDAEQLGISLAEELLDNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|217975048|ref|YP_002359799.1| porphobilinogen deaminase [Shewanella baltica OS223] gi|304412540|ref|ZP_07394146.1| porphobilinogen deaminase [Shewanella baltica OS183] gi|307307199|ref|ZP_07586937.1| porphobilinogen deaminase [Shewanella baltica BA175] gi|254800258|sp|B8E879|HEM3_SHEB2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|217500183|gb|ACK48376.1| porphobilinogen deaminase [Shewanella baltica OS223] gi|304349182|gb|EFM13594.1| porphobilinogen deaminase [Shewanella baltica OS183] gi|306910438|gb|EFN40869.1| porphobilinogen deaminase [Shewanella baltica BA175] Length = 310 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 170/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +S+ + Sbjct: 59 KGLFVKELEVAMLDDLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+ + R D+ + D RG + TRL KL+N + AI+LA AG+ RLK Sbjct: 119 LPLGATVGTSSLRRQCQIRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++ E+ P+ GQGA+ IE +N+ + + L+ + H +T V ERA L Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRINDERVKALLAPLEHLETRYRVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA G + G+V DG E G + +A +G A+ + Sbjct: 239 EGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTEATQLGVALAEELLSKG 298 Query: 301 NKNVFN 306 K++ + Sbjct: 299 AKSILD 304 >gi|227325802|ref|ZP_03829826.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 313 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H P ++ ++P+ T+GD I + L ++GG Sbjct: 1 MLANIIRIATRQSPLALWQARYVQQCL--NHLYPDLHVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P + GL ++ R+D RD F+S+ SL+ Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNHYDSLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S +GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPEGSCVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ L+ E+ P+ GQGAI IE +++ ++L+ +NH T V ERA L Sbjct: 179 LEERIRCALSPEESLPAVGQGAIGIECRLDDEHVRQLLAPLNHPATAARVLAERAMNVRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G TL+ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELEGDTLWLRALVGAPDGSQMIVGERKGRVSDAEQLGIALAEELLAKG 298 Query: 301 NKNVF 305 + Sbjct: 299 ASAIL 303 >gi|260774857|ref|ZP_05883759.1| porphobilinogen deaminase [Vibrio coralliilyticus ATCC BAA-450] gi|260609282|gb|EEX35437.1| porphobilinogen deaminase [Vibrio coralliilyticus ATCC BAA-450] Length = 312 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 173/306 (56%), Gaps = 3/306 (0%) Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++G Sbjct: 1 MTQSTPIRIATRKSPLALWQAYYVRDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E ++ G D AVHS KD+P +GL + RED RD F+S+T ++ Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYANID 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +V+GT SLRR+ + +R D+ + + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 ELPQGAVVGTCSLRRQCQIKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA Sbjct: 179 ELEERIRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLT 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I ++ G ++ +V DG G+R DA +G A + Sbjct: 239 LEGGCQVPIGSYSLLDGDDIWLRALVGEPDGSKIVRGEIKGSRADAEKLGVTLANQLLDD 298 Query: 300 SNKNVF 305 +++ Sbjct: 299 GARDIL 304 >gi|187733255|ref|YP_001882498.1| porphobilinogen deaminase [Shigella boydii CDC 3083-94] gi|187430247|gb|ACD09521.1| porphobilinogen deaminase [Shigella boydii CDC 3083-94] Length = 320 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMTSH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|237727921|ref|ZP_04558402.1| porphobilinogen deaminase [Citrobacter sp. 30_2] gi|226910370|gb|EEH96288.1| porphobilinogen deaminase [Citrobacter sp. 30_2] Length = 318 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 6 MLDNVLRIATRQSPLALWQAHYVKDALMANH--PGLIVELVPMVTRGDVILDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + GL + RED RD F+S+ SL + Sbjct: 64 KGLFVKELEVALLEKRADIAVHSMKDVPVEFPDGLGLVTICEREDPRDAFVSNKYNSLDE 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L + R D+ + RG + TRL+KL+N AI+LA AG+KRL Sbjct: 124 LPAGSIVGTSSLRRQCQLAKRRPDLVIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E ++ L E P+ GQGA+ IE +++ + Q L+ +NHE+T V ERA L Sbjct: 184 LESRVRTALPPEVSLPAVGQGAVGIECRLDDMRTQALLAPLNHEETALRVKAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 244 EGGCQVPIGSYAEIIDGEIWLRALVGAPDGSQMVCGERRGATQDAEQMGISLAEELLENG 303 Query: 301 NKNVF 305 + + Sbjct: 304 ARAIL 308 >gi|301029020|ref|ZP_07192174.1| porphobilinogen deaminase [Escherichia coli MS 196-1] gi|299878014|gb|EFI86225.1| porphobilinogen deaminase [Escherichia coli MS 196-1] Length = 320 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSDNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|283834568|ref|ZP_06354309.1| hydroxymethylbilane synthase [Citrobacter youngae ATCC 29220] gi|291069698|gb|EFE07807.1| hydroxymethylbilane synthase [Citrobacter youngae ATCC 29220] Length = 313 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDALMANH--PGLIVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + GL + RED RD F+S+ +L D Sbjct: 59 KGLFVKELEVALLEKRADIAVHSMKDVPVEFPDGLGLVTICEREDPRDAFVSNKYNTLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L + R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAKRRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E ++ L E P+ GQGA+ IE +++ + + L+ +NHE+T V ERA L Sbjct: 179 LESRVRTALPPEVSLPAVGQGAVGIECRLDDMRTRALLAPLNHEETALRVKAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELINGEIWLRALVGAPDGSQMVCGERRGAVQDAEQMGISLAEELLENG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARAIL 303 >gi|82779017|ref|YP_405366.1| porphobilinogen deaminase [Shigella dysenteriae Sd197] gi|81243165|gb|ABB63875.1| porphobilinogen deaminase [Shigella dysenteriae Sd197] Length = 320 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLVALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|323500165|ref|ZP_08105110.1| porphobilinogen deaminase [Vibrio sinaloensis DSM 21326] gi|323314794|gb|EGA67860.1| porphobilinogen deaminase [Vibrio sinaloensis DSM 21326] Length = 312 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 171/306 (55%), Gaps = 3/306 (0%) Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + P RI TR SPLAL A+ R +L H P + ++ + TKGD I + L ++G Sbjct: 1 MTQSSPIRIATRKSPLALWQAYFVRDALQAAH--PGLEVELVTMVTKGDVILDTPLAKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E ++ G D AVHS KD+P GL + RED RD F+S+T S+ Sbjct: 59 GKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPSGLGLVTICEREDPRDAFVSNTYNSID 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +V+GT SLRR+ L +R D+ + + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 ELPQGAVVGTCSLRRQCQLKEYRPDLIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E+ I+ + E P+ GQGA+ IE +++ + +L++ +NH+DT D V CERA Sbjct: 179 ELEERIRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHQDTADRVLCERAMNLT 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I +A +G ++ +V DG G R ++ +G A + Sbjct: 239 LEGGCQVPIGSYALLEGDDIWLRALVGEPDGSQIVRGEIKGPRSESEALGIKLANQLLDE 298 Query: 300 SNKNVF 305 + + Sbjct: 299 GAREIL 304 >gi|320178095|gb|EFW53075.1| Porphobilinogen deaminase [Shigella boydii ATCC 9905] Length = 559 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|110835183|ref|YP_694042.1| porphobilinogen deaminase [Alcanivorax borkumensis SK2] gi|123345297|sp|Q0VM28|HEM3_ALCBS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|110648294|emb|CAL17770.1| porphobilinogen deaminase [Alcanivorax borkumensis SK2] Length = 310 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ RI TR SPLA+ A + L +H+ + ++ + T+GD+I + L +IGG Sbjct: 1 MSREILRIATRSSPLAIWQAEYVQQRLESLHE--GLRVELVRIKTQGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P +L G + RED RD F+S+T L Sbjct: 59 KGLFVKELEEAMMDGRADIAVHSMKDVPMELPPGFALPVICEREDPRDAFVSNTFDGLSS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+A + R D+ V RG ++TRL KL+ AI+LA AG+KRL+ Sbjct: 119 LPHGACVGTSSLRRQAQVKANRPDLVVNSLRGNVQTRLGKLDAGNFDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ + E+ P+ GQGA+ IE + EL+ ++ DTWD V ERA L Sbjct: 179 MHDRIRYEMPPEESLPAVGQGAVGIECREGDESTIELLSPLSDVDTWDRVVAERAMNRRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IAGFA + L+ G+V DG R +G D A+ + Sbjct: 239 EGGCQVPIAGFALLEDGQLWLRGLVAEEDGSRVLRAEGTAPRGQGAELGIDIAEQLLAQG 298 Query: 301 NKNVF 305 + Sbjct: 299 ADEIL 303 >gi|74314316|ref|YP_312735.1| porphobilinogen deaminase [Shigella sonnei Ss046] gi|73857793|gb|AAZ90500.1| porphobilinogen deaminase [Shigella sonnei Ss046] Length = 320 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G +A +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAKQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|312963804|ref|ZP_07778275.1| Porphobilinogen deaminase [Pseudomonas fluorescens WH6] gi|311281839|gb|EFQ60449.1| Porphobilinogen deaminase [Pseudomonas fluorescens WH6] Length = 313 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 168/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLELAH--PGLKVSLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL + Sbjct: 59 KGLFVKELETALLENEADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTYTSLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPPGSIVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I +++ED P+ GQGA+ IE + + L+K ++H DT V ERA L Sbjct: 179 FEDRITSAISVEDSLPAGGQGAVGIECRTADSEIHALLKPLDHHDTEVRVTAERALNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V DG G + DA +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDNIWLRGLVGDPDGGTLLTAQARGPQADATALGIQVAEELLEKG 298 Query: 301 NKNVF 305 + Sbjct: 299 AGAIL 303 >gi|331649629|ref|ZP_08350711.1| hydroxymethylbilane synthase [Escherichia coli M605] gi|331041499|gb|EGI13647.1| hydroxymethylbilane synthase [Escherichia coli M605] Length = 320 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG + R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSLIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|126176187|ref|YP_001052336.1| porphobilinogen deaminase [Shewanella baltica OS155] gi|153002481|ref|YP_001368162.1| porphobilinogen deaminase [Shewanella baltica OS185] gi|166217785|sp|A3D9Q4|HEM3_SHEB5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166217786|sp|A6WTG0|HEM3_SHEB8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|125999392|gb|ABN63467.1| porphobilinogen deaminase [Shewanella baltica OS155] gi|151367099|gb|ABS10099.1| porphobilinogen deaminase [Shewanella baltica OS185] Length = 310 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +S+ + Sbjct: 59 KGLFVKELEVAMLDDLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+ + R D+ + D RG + TRL KL+N + AI+LA AG+ RLK Sbjct: 119 LPLGATVGTSSLRRQCQIRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++ E+ P+ GQGA+ IE +N+ + + L+ + H +T V ERA L Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRINDERVKALLAPLEHLETRYRVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA G + G+V DG E G + +A +G A+ + Sbjct: 239 EGGCQVPIGAFAEIDGDEMTLRGLVGNPDGSEIIEGVITGPKTEATQLGVALAEELLSKG 298 Query: 301 NKNVFN 306 K + + Sbjct: 299 AKTILD 304 >gi|317046390|ref|YP_004114038.1| porphobilinogen deaminase [Pantoea sp. At-9b] gi|316948007|gb|ADU67482.1| porphobilinogen deaminase [Pantoea sp. At-9b] Length = 313 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K FRI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG Sbjct: 1 MLDKIFRIATRQSPLALWQAQYVQQRLMAAH--PGLQVELVPMVTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ S+ Sbjct: 59 KGLFVKELELAMLENRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNHYDSIDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPQGAVVGTSSLRRQCQLSARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + L++ +N DT V ERA L Sbjct: 179 LEDRIRFALPAEISLPAVGQGAVGIECRLDDAELITLLQALNDGDTAVCVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA +G L+ G+V + DG R G R A +G A+ + Sbjct: 239 EGGCQVPIGSFAVLEGDQLWLRGLVGSPDGSQMITGERRGPRDQAEQMGISLAEELLDNG 298 Query: 301 NKNVF 305 + Sbjct: 299 ASEIL 303 >gi|113968732|ref|YP_732525.1| porphobilinogen deaminase [Shewanella sp. MR-4] gi|114049125|ref|YP_739675.1| porphobilinogen deaminase [Shewanella sp. MR-7] gi|117918843|ref|YP_868035.1| porphobilinogen deaminase [Shewanella sp. ANA-3] gi|123131000|sp|Q0HQI7|HEM3_SHESR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123325438|sp|Q0HN99|HEM3_SHESM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|158512312|sp|A0KS60|HEM3_SHESA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|113883416|gb|ABI37468.1| porphobilinogen deaminase [Shewanella sp. MR-4] gi|113890567|gb|ABI44618.1| porphobilinogen deaminase [Shewanella sp. MR-7] gi|117611175|gb|ABK46629.1| porphobilinogen deaminase [Shewanella sp. ANA-3] Length = 310 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 170/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L VH P + ++P+STKGD I + L ++GG Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERVH--PGIVVELLPMSTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ + D AVHS KD+P +GL + RED RD F+S+ +S+ + Sbjct: 59 KGLFVKELEVAMLEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+ RLK Sbjct: 119 LPLGATVGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++ E+ P+ GQGA+ IE N+ + + L+ + H +T V ERA L Sbjct: 179 LSERIASFISAEESLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA G + G+V DG E G + +A +G A+ + Sbjct: 239 EGGCQVPIGAFAEIHGDEMTLRGLVGNPDGSEIIEGVITGPKTEATKLGVALAEELLSKG 298 Query: 301 NKNVFN 306 K++ + Sbjct: 299 AKSILD 304 >gi|315125211|ref|YP_004067214.1| porphobilinogen deaminase [Pseudoalteromonas sp. SM9913] gi|315013724|gb|ADT67062.1| porphobilinogen deaminase [Pseudoalteromonas sp. SM9913] Length = 312 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 106/307 (34%), Positives = 168/307 (54%), Gaps = 4/307 (1%) Query: 1 MEKKP--FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M +K RI TR S LAL A ++ L H + ++P+ST+GD I + L +I Sbjct: 1 MTEKTKLVRIATRKSALALWQAEFVKAQLEHFHD--DVRVELVPMSTQGDIILDTPLAKI 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLF +E+E+ ++ G D AVHS KD+P + L++ RED RD F+S+ ++ Sbjct: 59 GGKGLFVKELEQAMLDGRADIAVHSMKDVPVEFPDDLELHVICEREDPRDAFVSNNFANI 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L +++GTSSLRR+ + R D+ + D RG + TRL KL++ + AI+LA AG+ R Sbjct: 119 DALPQGAIVGTSSLRRQCQIRALRPDLEIRDLRGNVNTRLAKLDSGQYDAIILAAAGLIR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L+ + I++ + E P+ GQGA+ IE +N+ + L+ + H +T VN ERA Sbjct: 179 LEMGERIRDFIEPEVSLPANGQGAVGIECRINDEVTKALLAPLEHSETRIRVNAERAMNR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+G C+ I +A G ++ G+V A DG +G+ DA +G + A+ + Sbjct: 239 HLEGGCQVPIGAYALVDGEQVHLRGLVGAIDGSEILRDEISGHVDDAEKLGVELAKKLLA 298 Query: 299 ISNKNVF 305 + Sbjct: 299 QGADKIL 305 >gi|91791755|ref|YP_561406.1| porphobilinogen deaminase [Shewanella denitrificans OS217] gi|91713757|gb|ABE53683.1| porphobilinogen deaminase [Shewanella denitrificans OS217] Length = 315 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 106/306 (34%), Positives = 166/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLAL A ++ L +H P ++ ++P++TKGD + + L ++GG Sbjct: 6 MSQHLIRIATRKSPLALWQAEFVKAELERIH--PGLSVELVPMTTKGDVLLDTPLAKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + RED RD F+S+ +L + Sbjct: 64 KGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEIICEREDPRDAFVSNNFANLAE 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + D RG + TRL KL++ AI+LA AG+ RLK Sbjct: 124 LPKGAVVGTSSLRRQCQIRAMRPDLIIKDLRGNVGTRLAKLDSGDYDAIILAAAGLIRLK 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I ++ E+ P+ GQGA+ IE ++ + + L+ + H +T V ERA L Sbjct: 184 LISRIASYISPEESLPANGQGAVGIECRTDDARVKALLAPLEHLETRYRVIAERAMNTRL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G L G+V DG G + +A +G A+ + Sbjct: 244 EGGCQVPIGAYAEIEGDELTLRGLVGNPDGSQIITGQVKGLKSEASQLGEQLAEILLAQG 303 Query: 301 NKNVFN 306 K + + Sbjct: 304 AKTILD 309 >gi|307132975|ref|YP_003884991.1| hydroxymethylbilane synthase [Dickeya dadantii 3937] gi|306530504|gb|ADN00435.1| hydroxymethylbilane synthase [Dickeya dadantii 3937] Length = 313 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 115/306 (37%), Positives = 169/306 (55%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H P + ++P+ T+GD + + L ++GG Sbjct: 1 MVDTILRIATRQSPLALWQAHFVQQRLKACH--PGLRVELVPMVTRGDVLLDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + R+D RD F+S+ SL D Sbjct: 59 KGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYDSLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + + +GTSSLRR+ L R D++V D RG + TRL+KL+N AI+LA AG+KRL Sbjct: 119 LPVGACVGTSSLRRQCQLRAHRPDLTVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L+ E P+ GQGA+ +E +++ + + L+ +NH+DT V ERA L Sbjct: 179 LEDRIRTALSPEQSLPAVGQGAVGVECRLDDARTRALLAPLNHDDTATRVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ I +A G TL+ +V A DG R G R DA +G A + Sbjct: 239 EGGCQVPIGSYAELQDGDTLWLRALVGAPDGSRIIYAERRGLRQDAEQLGIALADELLER 298 Query: 300 SNKNVF 305 +++ Sbjct: 299 GARDIL 304 >gi|119469646|ref|ZP_01612515.1| porphobilinogen deaminase [Alteromonadales bacterium TW-7] gi|119446893|gb|EAW28164.1| porphobilinogen deaminase [Alteromonadales bacterium TW-7] Length = 312 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 107/307 (34%), Positives = 164/307 (53%), Gaps = 4/307 (1%) Query: 1 MEKKP--FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M +K RI TR S LAL A ++ L H + ++P+ST+GD I + L +I Sbjct: 1 MTEKTKLVRIATRKSALALWQAEFVKAQLEHFHD--DVRVELVPMSTQGDIILDTPLAKI 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLF +E+E+ ++ G D AVHS KD+P + +GL + RED RD F+S+ +L Sbjct: 59 GGKGLFVKELEQAMLDGRADIAVHSMKDVPVEFPEGLALHTICEREDPRDAFVSNHFANL 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L +V+GTSSLRR+ + R D+ + D RG + TRL KL+ + AI+LA AG+ R Sbjct: 119 NELPEGAVVGTSSLRRQCQIRALRPDLEIRDLRGNVNTRLAKLDAGQYDAIILAAAGLIR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L+ + I + + E P+ GQGA+ IE + + + L+ + H T VN ERA Sbjct: 179 LEMGERIADYIEPEVSLPANGQGAVGIECRIEDEVTKALLAPLEHTHTRIRVNAERAMNR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+G C+ I +A ++ G+V A DG G+ DA +G + A+ + Sbjct: 239 RLEGGCQVPIGAYALVDSEQVHLRGLVGAIDGSEILRDEVAGHINDAEKLGIELAEKLLA 298 Query: 299 ISNKNVF 305 + Sbjct: 299 QGADKIL 305 >gi|120600512|ref|YP_965086.1| porphobilinogen deaminase [Shewanella sp. W3-18-1] gi|146294670|ref|YP_001185094.1| porphobilinogen deaminase [Shewanella putrefaciens CN-32] gi|158512986|sp|A1RPD7|HEM3_SHESW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166217787|sp|A4YBG2|HEM3_SHEPC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|120560605|gb|ABM26532.1| porphobilinogen deaminase [Shewanella sp. W3-18-1] gi|145566360|gb|ABP77295.1| porphobilinogen deaminase [Shewanella putrefaciens CN-32] gi|319427906|gb|ADV55980.1| porphobilinogen deaminase [Shewanella putrefaciens 200] Length = 310 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A ++ L +H P + ++P+STKGD I + L ++GG Sbjct: 1 MSENRIRIATRKSPLAMWQAEFVKAELERIH--PGIVVELLPMSTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ + D AVHS KD+P +GL + RED RD F+S+ +++ + Sbjct: 59 KGLFVKELEVAILEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNIYKTISE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+ L R D+ + D RG + TRL KL+N + AI+LA AG+ RLK Sbjct: 119 LPLGATVGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I ++ E P+ GQGA+ IE N+ + + L+ + H +T V ERA L Sbjct: 179 LSGRIASFISAEQSLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA G + G+V DG E G + +A +G A+ + Sbjct: 239 EGGCQVPIGAFAEINGDEMTLRGLVGNPDGSEIIEGIITGPKTEATQLGVALAEELLSKG 298 Query: 301 NKNVFN 306 K++ + Sbjct: 299 AKSILD 304 >gi|30064902|ref|NP_839073.1| porphobilinogen deaminase [Shigella flexneri 2a str. 2457T] gi|56480439|ref|NP_709607.2| porphobilinogen deaminase [Shigella flexneri 2a str. 301] gi|61213578|sp|Q83PH4|HEM3_SHIFL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|30043162|gb|AAP18884.1| porphobilinogen deaminase, hydroxymethylbilane synthase [Shigella flexneri 2a str. 2457T] gi|56383990|gb|AAN45314.2| porphobilinogen deaminase, hydroxymethylbilane synthase [Shigella flexneri 2a str. 301] gi|313647157|gb|EFS11612.1| porphobilinogen deaminase [Shigella flexneri 2a str. 2457T] gi|332751946|gb|EGJ82341.1| porphobilinogen deaminase [Shigella flexneri 2747-71] gi|332996995|gb|EGK16613.1| porphobilinogen deaminase [Shigella flexneri VA-6] gi|332997894|gb|EGK17501.1| porphobilinogen deaminase [Shigella flexneri K-218] gi|333019501|gb|EGK38782.1| porphobilinogen deaminase [Shigella flexneri K-304] Length = 313 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLCALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|53802806|ref|YP_115447.1| porphobilinogen deaminase [Methylococcus capsulatus str. Bath] gi|53756567|gb|AAU90858.1| porphobilinogen deaminase [Methylococcus capsulatus str. Bath] Length = 351 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 112/301 (37%), Positives = 163/301 (54%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL A S L H P + ++ ++T+GD++ + L ++GGKGLF Sbjct: 46 TLRIATRKSPLALWQAEYVASRLRAAH--PDLRVELVGMTTRGDKLLDAPLAKVGGKGLF 103 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E+ L+ G D AVHS KD+P + +GL ++A L RED RD +SH +S +L Sbjct: 104 VKELEQGLLEGRADIAVHSMKDVPVEFPEGLHLAAILEREDPRDALVSHRYRSFAELPAD 163 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGTSSLRR+ + S+ D RG + TRL KL+ + AI+LA AG+KRL ++ Sbjct: 164 ARIGTSSLRRQCQIKCRLPGCSLYDLRGNVNTRLAKLDAGEFDAIVLASAGLKRLGFQER 223 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L E P+ GQGAI +E + + L+ ++H T V ERA LDG C Sbjct: 224 IAETLTPEQCLPAIGQGAIGVECRSTDTRTNALLVPLHHPPTAWCVLAERAMNRRLDGGC 283 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + IAGFA +G TL G+V DG G+ +G+ A+++ + Sbjct: 284 QVPIAGFAQLEGDTLSLRGLVGNPDGSGIIRAEAVGHPSTFEALGKRVAEHLLDQGADEI 343 Query: 305 F 305 Sbjct: 344 L 344 >gi|61213332|sp|Q602K3|HEM3_METCA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 322 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 112/301 (37%), Positives = 163/301 (54%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL A S L H P + ++ ++T+GD++ + L ++GGKGLF Sbjct: 17 TLRIATRKSPLALWQAEYVASRLRAAH--PDLRVELVGMTTRGDKLLDAPLAKVGGKGLF 74 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E+ L+ G D AVHS KD+P + +GL ++A L RED RD +SH +S +L Sbjct: 75 VKELEQGLLEGRADIAVHSMKDVPVEFPEGLHLAAILEREDPRDALVSHRYRSFAELPAD 134 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGTSSLRR+ + S+ D RG + TRL KL+ + AI+LA AG+KRL ++ Sbjct: 135 ARIGTSSLRRQCQIKCRLPGCSLYDLRGNVNTRLAKLDAGEFDAIVLASAGLKRLGFQER 194 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L E P+ GQGAI +E + + L+ ++H T V ERA LDG C Sbjct: 195 IAETLTPEQCLPAIGQGAIGVECRSTDTRTNALLVPLHHPPTAWCVLAERAMNRRLDGGC 254 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + IAGFA +G TL G+V DG G+ +G+ A+++ + Sbjct: 255 QVPIAGFAQLEGDTLSLRGLVGNPDGSGIIRAEAVGHPSTFEALGKRVAEHLLDQGADEI 314 Query: 305 F 305 Sbjct: 315 L 315 >gi|194469126|ref|ZP_03075110.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205358767|ref|ZP_02658924.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194455490|gb|EDX44329.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205332052|gb|EDZ18816.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 313 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 160/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDALMATH--PGLTVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDV 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L + P+ GQGA+ IE +++ + Q L+ +NH T V ERA L Sbjct: 179 LESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG + R G+ A +G A+ + Sbjct: 239 EGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARAIL 303 >gi|300714797|ref|YP_003739600.1| Porphobilinogen deaminase [Erwinia billingiae Eb661] gi|299060633|emb|CAX57740.1| Porphobilinogen deaminase [Erwinia billingiae Eb661] Length = 313 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG Sbjct: 1 MLDKILRIATRQSPLALWQAHYVQQRLMACH--PGLRVELVPMVTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ D AVHS KD+P +GL + RED D F+S+ S+ Sbjct: 59 KGLFVKELEQAMLEDRADIAVHSMKDVPIAFPEGLGLVTICEREDPLDAFVSNQYDSVDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPQGAVVGTSSLRRQCQLSARRPDLIIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ + E+ P+ GQGA+ IE +++ +A L+ +N +DT V ERA L Sbjct: 179 LGDRIRYAMPAEESLPAVGQGAVGIECRLDDAQAIALLSALNDDDTAIRVKAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA +G L+ G+V + DG R G R DA +G A+ + Sbjct: 239 EGGCQVPIGSFALLQGDELWLRGLVGSPDGTAMIRGERRGPRADAEKMGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|110807507|ref|YP_691027.1| porphobilinogen deaminase [Shigella flexneri 5 str. 8401] gi|110617055|gb|ABF05722.1| porphobilinogen deaminase [Shigella flexneri 5 str. 8401] gi|281603194|gb|ADA76178.1| Porphobilinogen deaminase [Shigella flexneri 2002017] Length = 320 Score = 282 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 8 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 66 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 126 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 186 LESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA +G A+ + Sbjct: 246 EGGCQVPIGSYAELIDGEIWLCALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNG 305 Query: 301 NKNVF 305 + + Sbjct: 306 AREIL 310 >gi|94501432|ref|ZP_01307951.1| porphobilinogen deaminase [Oceanobacter sp. RED65] gi|94426397|gb|EAT11386.1| porphobilinogen deaminase [Oceanobacter sp. RED65] Length = 310 Score = 282 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 106/300 (35%), Positives = 162/300 (54%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +I TR S LAL A +S L H + ++ + T+GD+I + L +IGGKGLF Sbjct: 4 LKIATRSSKLALWQAEFVKSELEKFHS--DLQVELVKIKTQGDKILDTPLAKIGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E +++G+ D AVHS KD+P + +GL +S RE D F+S+ Q DL + Sbjct: 62 KELETAMLNGDADIAVHSMKDVPMEFPEGLGLSVICEREMPTDAFVSNHYQRFLDLPQGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+ +L R D+ V RG ++TRL KL+ + AI+LA AG+ RL+ E+ + Sbjct: 122 HVGTSSLRRQCQVLAARPDLKVSSLRGNVQTRLGKLDAGEFDAIILASAGLLRLELEERV 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E ++ E P+ GQGA+ IE +++ Q+L+ ++H DT V ERA L G C+ Sbjct: 182 AEHMSDEISLPAGGQGAVGIECRMDDEVTQKLLAPLHHSDTASRVYAERALNKRLQGGCQ 241 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IA +A L+ G+V + DG G A +G AA+ + + Sbjct: 242 VPIACYATLNDGELHLRGLVGSEDGSRIIRTEIRGPESQAEQLGIQAAEDLLAQGAGEIL 301 >gi|254238043|ref|ZP_04931366.1| porphobilinogen deaminase [Pseudomonas aeruginosa C3719] gi|126169974|gb|EAZ55485.1| porphobilinogen deaminase [Pseudomonas aeruginosa C3719] Length = 313 Score = 282 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V DG +A +G A+ + Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLAEAEALGVRVAEDLLEQG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 AEAILE 304 >gi|116053408|ref|YP_793733.1| porphobilinogen deaminase [Pseudomonas aeruginosa UCBPP-PA14] gi|122256573|sp|Q02EA3|HEM3_PSEAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|115588629|gb|ABJ14644.1| porphobilinogen deaminase [Pseudomonas aeruginosa UCBPP-PA14] Length = 313 Score = 282 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHSDTALRVTAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V DG +A +G A+ + Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLAEAEALGVRVAEDLLEQG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 AEAILE 304 >gi|77359075|ref|YP_338650.1| porphobilinogen deaminase [Pseudoalteromonas haloplanktis TAC125] gi|76873986|emb|CAI85207.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Pseudoalteromonas haloplanktis TAC125] Length = 312 Score = 282 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 106/304 (34%), Positives = 166/304 (54%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 RI TR S LAL A ++ L H P + ++P+ST+GD I + L +IGGK Sbjct: 4 TTNIVRIATRKSALALWQAEFVKAQLE--HYHPGILVELVPMSTQGDIILDTPLAKIGGK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E+ ++ G D AVHS KDMP + +GL + RED RD F+S+ ++ +L Sbjct: 62 GLFVKELEQAMLEGLADMAVHSMKDMPVEFPEGLTLHTICEREDPRDAFVSNNFANIDEL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +++GTSSLRR+ + R D+ + D RG + TRL KL++ + AI+LA AG+ RL+ Sbjct: 122 PQGAIVGTSSLRRQCQIRASRPDLKIHDLRGNVNTRLAKLDSGQYDAIILAAAGLIRLEM 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I+ + E P+ GQGA+ IE ++ + L+ + H +T VN ERA L+ Sbjct: 182 KDRIRAYIEPEVSLPANGQGAVGIECRTDDEAIKALLAPLEHSETRIRVNAERAMNRHLE 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I +A G ++ G+V A DG +G+ DA +G + A+ + Sbjct: 242 GGCQVPIGAYALVNGDQVHLRGLVGAIDGSEILRDEVSGHVNDAEKLGVELAKMLLAQGA 301 Query: 302 KNVF 305 + Sbjct: 302 DRIL 305 >gi|327395980|dbj|BAK13402.1| porphobilinogen deaminase HemC [Pantoea ananatis AJ13355] Length = 317 Score = 282 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K FRI TR SPLAL A + L+ H P + ++P+ TKGD I + L ++GG Sbjct: 5 MLNKIFRIATRQSPLALWQAQYVQQRLISAH--PGLRVELVPMVTKGDIILDTPLAKVGG 62 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ D AVHS KD+P +GL + R+D RD F+S+ S+ + Sbjct: 63 KGLFVKELEQAMLENRADLAVHSMKDVPVAFPEGLGLVTICQRDDPRDAFVSNHYASIDE 122 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSSLRR+ + R D+ + RG + TRL+KL+ + AI+LA AG+ RL Sbjct: 123 LPQGAVIGTSSLRRQCQISARRPDLVIRSLRGNVGTRLSKLDAGEYDAIILAAAGLNRLG 182 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I++ L + P+ GQGA+ IE +++ L++ +NH+DT V ERA L Sbjct: 183 LADRIRQPLPADISLPAVGQGAVGIECRLDDSTLIALLQALNHDDTAVCVRAERAMNTRL 242 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA +G L+ G+V A DG + R G R A +G A + Sbjct: 243 EGGCQVPIGSFAVLEGDELWLRGLVGAPDGSVMVSGERRGPRDQAEQMGISLADELLNGG 302 Query: 301 NKNVF 305 + + Sbjct: 303 AREIL 307 >gi|49085204|gb|AAT51260.1| PA5260 [synthetic construct] Length = 314 Score = 282 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V DG +A +G A+ + Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLAEAEALGVRVAEDLLEQG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 AEAILE 304 >gi|15600453|ref|NP_253947.1| porphobilinogen deaminase [Pseudomonas aeruginosa PAO1] gi|107104362|ref|ZP_01368280.1| hypothetical protein PaerPA_01005437 [Pseudomonas aeruginosa PACS2] gi|218894362|ref|YP_002443232.1| porphobilinogen deaminase [Pseudomonas aeruginosa LESB58] gi|254243856|ref|ZP_04937178.1| porphobilinogen deaminase [Pseudomonas aeruginosa 2192] gi|12230932|sp|Q60169|HEM3_PSEAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226740638|sp|B7V5F0|HEM3_PSEA8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|9951571|gb|AAG08645.1|AE004938_7 porphobilinogen deaminase [Pseudomonas aeruginosa PAO1] gi|126197234|gb|EAZ61297.1| porphobilinogen deaminase [Pseudomonas aeruginosa 2192] gi|218774591|emb|CAW30408.1| porphobilinogen deaminase [Pseudomonas aeruginosa LESB58] Length = 313 Score = 282 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V DG +A +G A+ + Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLAEAEALGVRVAEDLLEQG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 AEAILE 304 >gi|313110333|ref|ZP_07796223.1| porphobilinogen deaminase [Pseudomonas aeruginosa 39016] gi|310882725|gb|EFQ41319.1| porphobilinogen deaminase [Pseudomonas aeruginosa 39016] Length = 313 Score = 281 bits (719), Expect = 7e-74, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ +N++D P+ GQGA+ IE + L++ ++H DT V ERA L Sbjct: 179 FESRIRSSINVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V DG +A +G A+ + Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLAEAEALGVRVAEDLLEQG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 AEAILE 304 >gi|317494824|ref|ZP_07953235.1| porphobilinogen deaminase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917149|gb|EFV38497.1| porphobilinogen deaminase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 323 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 113/304 (37%), Positives = 164/304 (53%), Gaps = 2/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RI TR SPLAL A+ R L P + ++P+ T+GD + + L ++GGKG Sbjct: 13 NQTLRIATRQSPLALWQAYYVRDHLQA--HWPDLTVELVPMVTRGDVLLDTPLAKVGGKG 70 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L+DL Sbjct: 71 LFVKELELALLDGRADIAVHSMKDVPVAFPEGLGLVTICEREDPRDAFVSPKYARLEDLP 130 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S++GTSSLRR+ L R D+ V D RG + TRL KL+N AI+LA AG+KRL+ E Sbjct: 131 EGSIVGTSSLRRQCQLREIRPDLIVRDLRGNVGTRLAKLDNGDYDAIILAAAGLKRLELE 190 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ L E P+ GQGA+ IE +N+ + Q L+ +N DT V+ ERA L+G Sbjct: 191 ERIRYALPPEQSLPAVGQGAVGIECRLNDTRTQALLAPLNDIDTATRVSAERAMNTRLEG 250 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I ++ G ++ +V DG + R G R A +G A+ + + Sbjct: 251 GCQVPIGSYSELNGDEIWLRALVGKPDGTLIIRGERRGPRAKAAELGVSLAEELLERGAR 310 Query: 303 NVFN 306 + Sbjct: 311 EILE 314 >gi|260771623|ref|ZP_05880543.1| porphobilinogen deaminase [Vibrio metschnikovii CIP 69.14] gi|260613400|gb|EEX38599.1| porphobilinogen deaminase [Vibrio metschnikovii CIP 69.14] Length = 312 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 110/302 (36%), Positives = 166/302 (54%), Gaps = 2/302 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RI TR SPLAL A + +L H P + ++ + T+GD + + L ++GGKGLF Sbjct: 6 PIRIATRQSPLALWQAHFVKDALQAAH--PHLAVELVTMVTRGDVLLDTPLAKVGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ G D AVHS KD+P GL + RED RD F+S+T SL+ L Sbjct: 64 VKELEVAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYHSLEALPHG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +++GT SLRR+ + R DI + + RG + TRL KL+ + AI+LA AG+KRLK E+ Sbjct: 124 AIVGTCSLRRQCQIKAARPDIIIKELRGNVGTRLAKLDAGEFDAIVLAAAGLKRLKLEQR 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I ++ E P+ GQGA+ IE +++ + L++ +NH DT+D V CERA L G C Sbjct: 184 IASFISPEQSLPAVGQGAVGIECRLDDQRLLTLLEPLNHADTYDRVICERAMNLTLQGGC 243 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I + G ++ +V DG G R A +G + AQ + +++ Sbjct: 244 QVPIGSYTELDGEQIWLRALVGEPDGSRIIRGEIRGPRQQAERLGVELAQQLLDQGARDI 303 Query: 305 FN 306 N Sbjct: 304 LN 305 >gi|268592915|ref|ZP_06127136.1| hydroxymethylbilane synthase [Providencia rettgeri DSM 1131] gi|291311707|gb|EFE52160.1| hydroxymethylbilane synthase [Providencia rettgeri DSM 1131] Length = 314 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 113/304 (37%), Positives = 167/304 (54%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 RI TR SPLAL A + L +H P + ++P+ TKGD I + L ++GGK Sbjct: 3 STNIVRIATRKSPLALWQAHFVKDKLEQLH--PGLLVELVPMVTKGDIILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L+ G D AVHS KD+P + +GL + RED RD F+S+ +L+ L Sbjct: 61 GLFVKELELALLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYDNLEAL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 S++GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 121 PEGSIVGTSSLRRQCQLRELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E IK L E P+ GQGA+ IE +N+ K +EL+ +N++ T V ERA L+ Sbjct: 181 ETRIKTALAPEQCLPAVGQGAVGIECRLNDSKTRELLAKLNNDATSTCVLAERAMNMRLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I +A + ++ +V A DG + R + +A G A+ + Sbjct: 241 GGCQVPIGSYAIWQDDKIWLRALVGAPDGSVIIRGERRVSPSEANQAGVSLAEELLERGA 300 Query: 302 KNVF 305 + + Sbjct: 301 REIL 304 >gi|296392119|ref|ZP_06881594.1| porphobilinogen deaminase [Pseudomonas aeruginosa PAb1] Length = 313 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 167/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA L Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADSALHALLEPLHHTDTALRVTAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V DG +A +G A+ + Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLAEAEALGVRVAEDLLEQG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 AEAILE 304 >gi|239833011|ref|ZP_04681340.1| porphobilinogen deaminase [Ochrobactrum intermedium LMG 3301] gi|239825278|gb|EEQ96846.1| porphobilinogen deaminase [Ochrobactrum intermedium LMG 3301] Length = 314 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 149/305 (48%), Positives = 196/305 (64%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +IGTR S LALA A+ETR LM+ H +P I I+P+ST GDRI +R L+EIGGK Sbjct: 7 KNGTLKIGTRGSKLALAQAYETRRRLMEAHGLPEEAIEIVPMSTAGDRIQDRALSEIGGK 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFTEEIE+ L G ID AVHS KDMPT L GL +S +L RED RD FI TA L DL Sbjct: 67 GLFTEEIEQALTDGRIDLAVHSTKDMPTVLPDGLHLSVFLEREDPRDAFIGRTASRLLDL 126 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +G+SSLRR+AL+ R R DI V+ FRG ++TRL KL + LA AG++RL Sbjct: 127 PQGATVGSSSLRRQALIRRLRPDIQVVIFRGNVDTRLRKLEAGEVDGTFLACAGLRRLGL 186 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 VI E+++ E F P+PGQGAI IET + + + L+ + H +T ++ CERAFLA LD Sbjct: 187 GDVITELVDPESFLPAPGQGAIGIETRIGDTRIDALLAPLAHRETGIALACERAFLAALD 246 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC++ IAG A G + F+G++L DG HE+ G +A +GR+AA+ IR + Sbjct: 247 GSCRTPIAGLATVDGDRVSFHGMILKPDGSEAHEIRAEGPVSNAAALGREAAERIRAKAG 306 Query: 302 KNVFN 306 F Sbjct: 307 PQFFE 311 >gi|283787518|ref|YP_003367383.1| porphobilinogen deaminase [Citrobacter rodentium ICC168] gi|282950972|emb|CBG90649.1| porphobilinogen deaminase [Citrobacter rodentium ICC168] Length = 313 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + +LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDALMANH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLEKRADIAVHSMKDVPVEFPAGLGLVTICEREDPRDAFVSNNYPSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + Q L+ +N E T V ERA L Sbjct: 179 LESRIRAALPPEVSLPAVGQGAVGIECRLDDRRTQALLAPLNDEITALRVKAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A L+ +V A DG + R G+ A +G A+ + Sbjct: 239 EGGCQVPIGSYAEMIDGELWLRALVGAPDGSLMVRGERRGSPEQAEQMGISLAEELLDNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARAIL 303 >gi|269137476|ref|YP_003294176.1| porphobilinogen deaminase [Edwardsiella tarda EIB202] gi|267983136|gb|ACY82965.1| porphobilinogen deaminase [Edwardsiella tarda EIB202] gi|304557549|gb|ADM40213.1| Porphobilinogen deaminase [Edwardsiella tarda FL6-60] Length = 317 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 113/302 (37%), Positives = 157/302 (51%), Gaps = 2/302 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL A R L + P I ++P+ T+GD + + L ++GGKGLF Sbjct: 11 TLRIATRQSPLALWQAHYVRDQL--LTHWPQLTIELVPMVTRGDVLLDTPLAKVGGKGLF 68 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L+ G D AVHS KD+P GL + RED RD F+S SL+ L Sbjct: 69 VKELELALLEGRADIAVHSMKDVPVAFPDGLGLVTICQREDPRDAFVSPRFASLEQLPPG 128 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SV+GTSSLRR+ L R D+ + D RG + TRL KL+ AI+LA AG+KRL+ + Sbjct: 129 SVVGTSSLRRQCQLRAARPDLQIRDLRGNVGTRLAKLDAGDYDAIILAAAGLKRLQLDDR 188 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ L E P+ GQGA+ IE + + + L+ +NH DT V ERA L+G C Sbjct: 189 IRTPLTPEQSLPAVGQGAVGIECRLADDATRRLLAPLNHADTALRVCAERAMNTRLEGGC 248 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I +A G L+ +V A DG R G A +G A + + + Sbjct: 249 QVPIGSYAEIDGDQLWLRALVGAPDGSRIIRGERRGPLTQAEAMGTALADELLARGARTI 308 Query: 305 FN 306 + Sbjct: 309 LD 310 >gi|300721444|ref|YP_003710719.1| hydroxymethylbilane synthase [Xenorhabdus nematophila ATCC 19061] gi|297627936|emb|CBJ88482.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Xenorhabdus nematophila ATCC 19061] Length = 313 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MTMKTIRIATRQSPLAMWQAHYVQKQLQHFH--PELKVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + GL + R+D RD F+S SL D Sbjct: 59 KGLFVKELELALLEKRADIAVHSMKDVPVEFPNGLGLVTICERDDPRDAFVSVKYASLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L + R D+ + D RG + TRL+KL+N AI+LA AG+KRL Sbjct: 119 LPTGSVVGTSSLRRQCQLRQLRPDLVIRDLRGNVGTRLSKLDNGDYDAIILATAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ L E P+ GQGA+ IE +++ + +EL+ +NH T V ERA L Sbjct: 179 LEERIRMPLAPELLLPAVGQGAVGIECRLDDQQTRELLAPLNHARTEICVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + ++ +V A DG + R + +A G A+ + Sbjct: 239 EGGCQVPIGSYAIWQEDKIWLRALVGAPDGTVSVRGERVVSPEEARQAGVALAEELLEKG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARQIL 303 >gi|152978040|ref|YP_001343669.1| porphobilinogen deaminase [Actinobacillus succinogenes 130Z] gi|189042873|sp|A6VL87|HEM3_ACTSZ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|150839763|gb|ABR73734.1| porphobilinogen deaminase [Actinobacillus succinogenes 130Z] Length = 309 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 168/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+++ +I TR SPLAL A + L +++ P + ++P+ TKGD I + L +IGG Sbjct: 1 MQQEILKIATRQSPLALWQANFVKDRLTEIY--PDLTVELVPMVTKGDVILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L++G+ D AVHS KD+P + GL +S RED RD F+S+ ++L D Sbjct: 59 KGLFVKELENALLNGDADIAVHSMKDVPMEFPAGLGLSVICKREDPRDAFVSNRYRTLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L + R D+++ RG + TRL+KL+ AI+LA AG+ RL Sbjct: 119 LPPGAIVGTSSLRRQCQLKKRRPDLNIRSLRGNVGTRLSKLDQGDYDAIILASAGLIRLA 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I + E P+ GQGA+ IE +N+ + Q+L+ + +T V ERA L Sbjct: 179 LPERIASFIETEISLPAAGQGAVGIECRINDQRVQKLLAPLADTETTACVLAERAMNNRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I G+A G+ L+ +V A DG +A +G A+ + Sbjct: 239 QGGCQVPIGGYAVLNGNELHLRALVGALDGSKIIRAEGKSAVENAEVLGIQIAESLLAQG 298 Query: 301 NKNVF 305 + Sbjct: 299 ADKIL 303 >gi|254427203|ref|ZP_05040910.1| porphobilinogen deaminase [Alcanivorax sp. DG881] gi|196193372|gb|EDX88331.1| porphobilinogen deaminase [Alcanivorax sp. DG881] Length = 310 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 168/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ RI TR SPLA+ A + L +H+ + ++ + T+GD+I + L +IGG Sbjct: 1 MSREILRIATRSSPLAIWQAEYVQQRLESLHE--GLAVELVRIKTQGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P +L +G + RED RD F+S+T SL Sbjct: 59 KGLFVKELEEAMMDGRADIAVHSMKDVPMELPEGFALPVICEREDPRDAFVSNTFDSLSS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+A + R D+ V RG ++TRL KL+ + AI+LA AG+KRL+ Sbjct: 119 LPHGACVGTSSLRRQAQVKANRPDLVVKSLRGNVQTRLGKLDAGEFDAIILAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ + E+ P+ GQGA+ IE + + +L+ ++ DTWD V ERA L Sbjct: 179 MHDRIRYEMPPEESLPAVGQGAVGIECREADTRTIDLLSPLSDVDTWDRVVAERAMNRRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DG C+ IAGFA + L+ G+V DG + R +G D A+ + Sbjct: 239 DGGCQVPIAGFALLEDGQLWLRGLVAEEDGSRVLRAEGSAPRAKGAELGIDIAEQLLAQG 298 Query: 301 NKNVF 305 + Sbjct: 299 ADAIL 303 >gi|120553424|ref|YP_957775.1| porphobilinogen deaminase [Marinobacter aquaeolei VT8] gi|166217776|sp|A1TXW9|HEM3_MARAV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|120323273|gb|ABM17588.1| hydroxymethylbilane synthase [Marinobacter aquaeolei VT8] Length = 313 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 171/306 (55%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K+ RI TR S LAL A ++ L +H ++ +I + T+GD+I + L +IGG Sbjct: 1 MSKRTLRIATRSSALALWQAEFIKAELERLHD--NVDVELIKIKTQGDKILDVPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P + +GL + A RED D F+S+ + + Sbjct: 59 KGLFVKELEEAMLDGRADLAVHSMKDVPMEFPEGLGLVAICEREDPTDAFVSNQYEHIDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT+SLRR+A L R D+ + RG + TRL KL+ + AI+LA +G+KRL Sbjct: 119 LPEGAVVGTASLRREAQLRANRPDLQIKVLRGNVNTRLAKLDAGEYDAIVLASSGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ L P+ GQGA+ IE V + + EL+ +NH DTWD V+ ERA L Sbjct: 179 FHDRIRYCLPDTFSLPAVGQGALGIECRVGDTELLELIDPLNHTDTWDRVSAERALNRRL 238 Query: 241 DGSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ IA +A + TL+ G+V A DG V R + +GR+ A+ + + Sbjct: 239 EGGCQVPIAAYALLEDDNTLWLRGLVGAVDGTQIFRVEGRAPRAEGERLGRELAEQLLSM 298 Query: 300 SNKNVF 305 V Sbjct: 299 GADKVL 304 >gi|146313619|ref|YP_001178693.1| porphobilinogen deaminase [Enterobacter sp. 638] gi|167008813|sp|A4WG12|HEM3_ENT38 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|145320495|gb|ABP62642.1| hydroxymethylbilane synthase [Enterobacter sp. 638] Length = 313 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H+ + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAQYVKQRLEACHQ--GLRVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL D Sbjct: 59 KGLFVKELEIALLENRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNRYASLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPKGSVVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + E P+ GQGA+ IE +++ + + L+ +NH++T V ERA L Sbjct: 179 LESRIRVAMPPELCLPAVGQGAVGIECRLDDDRTRALLSPLNHDETAIRVQAERAMNMRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A L+ +V A DG R G DA +G A + Sbjct: 239 EGGCQVPIGSYAELINGELWLRALVGAPDGSQMVRGERRGLPQDAEMLGISLADELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARAIL 303 >gi|293393888|ref|ZP_06638195.1| hydroxymethylbilane synthase [Serratia odorifera DSM 4582] gi|291423715|gb|EFE96937.1| hydroxymethylbilane synthase [Serratia odorifera DSM 4582] Length = 313 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 118/305 (38%), Positives = 171/305 (56%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQQRLMASH--PDLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P + GL + R+D RD F+S+ SL Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPVEFPAGLGLVTICERDDPRDAFVSNRFASLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L + R D+ V D RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPQGSVVGTSSLRRQCQLRQRRPDLLVRDLRGNVGTRLAKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ ++ E+ P+ GQGA+ IE +++ + L+ +NHE T V ERA L Sbjct: 179 LEQRIRSPMSPEESLPAVGQGAVGIECRLDDAVTRALLAPLNHELTATRVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A G TL+ +V A DG + R G A ++G + A+ + Sbjct: 239 EGGCQVPIGSYAELDGDTLWLRALVGAPDGSLMVRGERRGPAAQAEHMGIELAEELLAKG 298 Query: 301 NKNVF 305 +++ Sbjct: 299 ARDIL 303 >gi|157829875|pdb|1AH5|A Chain A, Reduced Form Selenomethionine-Labelled Hydroxymethylbilane Synthase Determined By Mad Length = 313 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H P + ++P T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLXASH--PGLVVELVPXVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELEVALLENRADIAVHSXKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ L E P+ GQGA+ IE +++ + +EL+ +NH +T V ERA L Sbjct: 179 LESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAXNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A ++ +V A DG R G DA G A+ + Sbjct: 239 EGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQXGISLAEELLNNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|148262442|ref|YP_001229148.1| porphobilinogen deaminase [Geobacter uraniireducens Rf4] gi|189028092|sp|A5GCW2|HEM3_GEOUR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|146395942|gb|ABQ24575.1| porphobilinogen deaminase [Geobacter uraniireducens Rf4] Length = 318 Score = 280 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 166/305 (54%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A +S L + P + ++ + T GD+I + L ++GG Sbjct: 1 MALKTLRIGTRASQLALWQANWVKSELEKRY--PGLEVSLLKIKTIGDKILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ G+ID AVHS KD+PT+ +GL + RED RD IS + D Sbjct: 59 KGLFVKEIEEAMLRGDIDIAVHSMKDVPTEFPEGLGLHCITEREDPRDAVISRGIKFA-D 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A LL+ R D+ ++ RG +ETR+NKL A++LA AG+KRL Sbjct: 118 LPKGAKIGTSALRRQAQLLKIRPDMEMVIIRGNVETRINKLEAENLDAVILAAAGLKRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + E L + P+ GQGA+ IE ++N + + + NH T +V ERA L Sbjct: 178 FTDKVAEYLPTDLSIPAIGQGALGIECRLDNEEVKSAIDFFNHPATAYAVRAERALLWRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA F +G L G + + DGK + S +G + +G A+ + Sbjct: 238 EGGCQVPIAAFGEVEGDQLKLTGFIASVDGKTSVKGSVSGPAEECEKLGITLAEQLLKDG 297 Query: 301 NKNVF 305 + Sbjct: 298 GHEIL 302 >gi|311693131|gb|ADP96004.1| porphobilinogen deaminase [marine bacterium HP15] Length = 313 Score = 280 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 109/306 (35%), Positives = 170/306 (55%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K+ RI TR S LAL A ++ L +H + ++ + T+GD+I + L +IGG Sbjct: 1 MSKRTLRIATRSSALALWQAEFIKAELERLHD--NITVELVKIKTQGDKILDVPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P + +GL + A RED D F+S+ ++ Sbjct: 59 KGLFVKELEEAMLDGRADLAVHSMKDVPMEFPEGLGLVAICEREDPTDAFVSNHYDNVDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT+SLRR+A L +R D+ + RG + TRL KL+ + AI+LA +G+KRL Sbjct: 119 LPHGAVVGTASLRREAQLRAYRPDLEIRVLRGNVNTRLAKLDAGEYEAIVLASSGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L P+ GQGA+ IE V++ +++ + H+DTWD V ERA L Sbjct: 179 FHERIRYCLPDTLSLPAVGQGALGIECRVDDQDLLAMLEPLKHKDTWDRVTAERALNRRL 238 Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ IA +A T++ G+V A DG V R + +GR+ A+ + + Sbjct: 239 EGGCQVPIAAYALLEDDDTIWLRGLVGAVDGTQIFRVEGRAPRAEGERLGRELAEDLLAL 298 Query: 300 SNKNVF 305 V Sbjct: 299 GADKVL 304 >gi|78484457|ref|YP_390382.1| porphobilinogen deaminase [Thiomicrospira crunogena XCL-2] gi|123728099|sp|Q31JG5|HEM3_THICR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78362743|gb|ABB40708.1| hydroxymethylbilane synthase [Thiomicrospira crunogena XCL-2] Length = 309 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 114/304 (37%), Positives = 172/304 (56%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK RI TR SPLA+ A ++ L H+ + ++P+STKGD+I + L +IGGK Sbjct: 1 MKKTLRIATRKSPLAMWQAEFVKAELEKHHE--GLTVELLPMSTKGDKILDVPLAKIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT+E+E ++++GE D AVHS KD+P L +G + A L R + D F+S+ ++L Sbjct: 59 GLFTKELEDRMLAGEADIAVHSMKDVPMVLPEGFALGAILERHEPTDAFVSNDYAHFEEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSSLRRKA L+ R D+ V D RG + TRL KL+ AI+LA +G+KRL+ Sbjct: 119 PQGAVLGTSSLRRKAQLMAARPDLVVKDLRGNVGTRLGKLDAGDYDAIVLATSGLKRLEL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 ++ I+ L+ E P+ QG + IE +P+ EL++V+NH DT ERA L+ Sbjct: 179 DERIRHELSPETCLPAVSQGTLGIEYFEKDPEVLELIQVLNHRDTEIRTLAERAMNHRLE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I +A + +Y G+V A DG G++ D +G A+ + Sbjct: 239 GGCQVPIGVYAELEDDQIYLRGLVGALDGSEILRSEARGSQKDPETLGVYVAEQLLEQGA 298 Query: 302 KNVF 305 + Sbjct: 299 GEIL 302 >gi|71278494|ref|YP_266842.1| porphobilinogen deaminase [Colwellia psychrerythraea 34H] gi|123733846|sp|Q48AW8|HEM3_COLP3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|71144234|gb|AAZ24707.1| porphobilinogen deaminase [Colwellia psychrerythraea 34H] Length = 317 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 107/307 (34%), Positives = 159/307 (51%), Gaps = 4/307 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR S LAL A ++ L H N+ ++P++TKGD I + L ++GG Sbjct: 1 MNNTTVRIATRKSALALWQAEYVKAQLEHFHD--GINVELVPMTTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + PRED RD F+S+T +SL D Sbjct: 59 KGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEVICPREDPRDAFVSNTIKSLSD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+ RL+ Sbjct: 119 LPQGSIVGTSSLRRQCQLKASRPDLDIRDLRGNVNTRLRKLDEGQYDAIILAAAGLIRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I + + E+ P+ GQGA+ IE ++ + L+ + T V ERA L Sbjct: 179 MSERIAQFIEPEEMLPANGQGAVGIECRNDDATIKALLAPLECATTRIRVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 G C+ I + G ++ G+V + DG E G + +G AQ + Sbjct: 239 QGGCQVPIGSYGVISADGKNIHLRGLVGSVDGSEMIESEITGPVEEGEALGNKLAQELLS 298 Query: 299 ISNKNVF 305 + Sbjct: 299 RGADKIL 305 >gi|260914569|ref|ZP_05921037.1| hydroxymethylbilane synthase [Pasteurella dagmatis ATCC 43325] gi|260631360|gb|EEX49543.1| hydroxymethylbilane synthase [Pasteurella dagmatis ATCC 43325] Length = 311 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 172/305 (56%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +I TR SPLAL A + L + P N+V++P+ TKGD I + L +IGG Sbjct: 1 MTNNTLKIATRQSPLALWQANYVKQRLESFY--PDLNVVLVPMVTKGDVILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+SGE D AVHS KD+P + +GL +S PRED D +S+T ++L++ Sbjct: 59 KGLFVKELEIALLSGEADIAVHSMKDVPMQFPEGLGLSVICPREDPHDALVSNTYRTLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L + R D+ + RG + TRL+KL+ AI+LA AG+ RL Sbjct: 119 LPQGAIVGTSSLRRQCQLKQLRPDLKIESLRGNVGTRLSKLDCGDYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++I+D P+ GQGA+ IE N+ + Q+L+ + +T D V ERA L Sbjct: 179 LTERIASFIDIQDMLPAAGQGAVGIECRKNDSRVQQLLAPLADIETTDCVLAERAMNTHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + +Y G+V A DG +A N+G A+ + Sbjct: 239 QGGCQVPIAGYAIIENDQIYLRGLVGALDGSAILRAEAKSAVKNAENLGIQVAEMLLQQG 298 Query: 301 NKNVF 305 N+ Sbjct: 299 AGNIL 303 >gi|126208484|ref|YP_001053709.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae L20] gi|126097276|gb|ABN74104.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 309 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 111/304 (36%), Positives = 163/304 (53%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K RI TR SPLAL A + L + P ++ ++ + TKGD I + L +IGGK Sbjct: 1 MKDTLRIATRQSPLALWQANFVKDELEK--RFPELSVELVTMVTKGDVILDTPLAKIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L Sbjct: 59 GLFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 119 PAGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGM 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I+ +++E P+ GQGA+ IET VN+ + + +NH T V ERA L Sbjct: 179 PERIRSFISVEQSLPAAGQGAVGIETRVNDERVLNYLATLNHNPTACCVIAERAMNTRLQ 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I GFA G+ + +V A DG S +R +A +G A+ + Sbjct: 239 GGCQVPIGGFATLNGNEITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQLLAQGA 298 Query: 302 KNVF 305 + Sbjct: 299 DKIL 302 >gi|332995105|gb|AEF05160.1| porphobilinogen deaminase [Alteromonas sp. SN2] Length = 311 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 108/304 (35%), Positives = 167/304 (54%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + RI TR S LAL A ++ L++ H + ++P+ST+GDRI + L +IGGK Sbjct: 5 KNRTIRIATRKSALALWQAEYVKAKLLEHHD--GIAVELVPMSTQGDRILDTPLAKIGGK 62 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P + +G + A RE+ D F+S+ +L L Sbjct: 63 GLFIKELEVAMLEGRADIAVHSMKDLPVEFPEGFGLHAICERENPFDAFVSNHFDNLDAL 122 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSSLRR+ + + R D+ + D RG + TRL KL+ + AI+LA AG+ RL Sbjct: 123 PEGAVVGTSSLRRQCQIRKHRPDLKIKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLGM 182 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ IK L P+ GQGA+ IE ++ + L++ +NH +T V+ ERA L+ Sbjct: 183 EERIKTGLPASVSLPAVGQGAVGIECRNDDAELIALLQALNHGETQTRVSAERAMNERLE 242 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I FA G ++ G+V DG S G +A +IG + A+ + Sbjct: 243 GGCQVPIGSFATLDGDSITLTGMVGQPDGSTLLFASATGPTKNAKSIGVEVAEALLEQGA 302 Query: 302 KNVF 305 + Sbjct: 303 GEIL 306 >gi|329297028|ref|ZP_08254364.1| porphobilinogen deaminase [Plautia stali symbiont] Length = 313 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K FRI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG Sbjct: 1 MLNKIFRIATRQSPLALWQAQYVQQRLMAAH--PGLQVELMPMVTKGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P GL + RED RD F+S+ S+ Sbjct: 59 KGLFVKELELAMLENRADMAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNHYSSIDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + RG + TRL+KL+ + AI+LA AG+KRL Sbjct: 119 LPQGAVVGTSSLRRQCQISARRPDLVIHSLRGNVGTRLSKLDAGEYDAIILAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ L E P+ GQGA+ IE +++ L++ +NH DT V ERA L Sbjct: 179 LEDRIRQALPAEFSLPAVGQGAVGIECRLDDQPLITLLQALNHSDTAVCVRAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA + L+ G+V A DG R G R A +G A+ + Sbjct: 239 EGGCQVPIGSFAVLEDDQLWLRGLVGAPDGSQMVVGERRGPREQAEQMGISLAEELLDGG 298 Query: 301 NKNVF 305 +++ Sbjct: 299 ARDIL 303 >gi|32033974|ref|ZP_00134230.1| COG0181: Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 314 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 111/304 (36%), Positives = 163/304 (53%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K RI TR SPLAL A + L + P ++ ++ + TKGD I + L +IGGK Sbjct: 6 MKDTLRIATRQSPLALWQANFVKDELEK--RFPELSVELVTMVTKGDVILDTPLAKIGGK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L Sbjct: 64 GLFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDEL 123 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 124 PAGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGM 183 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I+ +++E P+ GQGA+ IET VN+ + + +NH T V ERA L Sbjct: 184 PERIRSFISVEQSLPAAGQGAVGIETRVNDERVLNYLATLNHNPTACCVIAERAMNTRLQ 243 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I GFA G+ + +V A DG S +R +A +G A+ + Sbjct: 244 GGCQVPIGGFATLNGNEITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQLLAQGA 303 Query: 302 KNVF 305 + Sbjct: 304 DKIL 307 >gi|254360510|ref|ZP_04976659.1| hydroxymethylbilane synthase [Mannheimia haemolytica PHL213] gi|261493197|ref|ZP_05989725.1| hydroxymethylbilane synthase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495982|ref|ZP_05992397.1| hydroxymethylbilane synthase [Mannheimia haemolytica serotype A2 str. OVINE] gi|153091050|gb|EDN73055.1| hydroxymethylbilane synthase [Mannheimia haemolytica PHL213] gi|261308358|gb|EEY09646.1| hydroxymethylbilane synthase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311145|gb|EEY12320.1| hydroxymethylbilane synthase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 311 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 111/304 (36%), Positives = 164/304 (53%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K RI TR SPLAL A +S L P ++ ++ + TKGD I + L +IGGK Sbjct: 1 MKDILRIATRQSPLALWQANFVKSELEK--HFPQLSVELVTMVTKGDIILDTPLAKIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ SL+DL Sbjct: 59 GLFVKELELALLENRADIAVHSMKDVPMSFPEGLGLAVICEREDPRDAFVSNNYHSLEDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 119 PKGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 ++ I+ +++E P+ GQGA+ IET N+ + + +NH T V ERA L Sbjct: 179 QERIRSYISVEQSLPAAGQGAVGIETRANDERILNYIAKLNHSSTACCVMAERAMNTRLQ 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I G+A +G L +V + DG S G++ +A +G A+ + Sbjct: 239 GGCQVPIGGYATLEGDELTLNALVGSLDGSQIIRASAKGHKQEAEQLGILVAEQLLAQGA 298 Query: 302 KNVF 305 + Sbjct: 299 DKIL 302 >gi|149376990|ref|ZP_01894744.1| porphobilinogen deaminase [Marinobacter algicola DG893] gi|149358767|gb|EDM47237.1| porphobilinogen deaminase [Marinobacter algicola DG893] Length = 313 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 107/306 (34%), Positives = 168/306 (54%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K+ RI TR S LAL A +S L +H + ++ + T+GD+I + L +IGG Sbjct: 1 MSKRTLRIATRSSALALWQAEFIKSELERLHD--NVTVELVKIKTQGDKILDVPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ +++G D AVHS KD+P + +GL + A RED D F+S+ ++ Sbjct: 59 KGLFVKELEEAMLAGSADLAVHSMKDVPMEFPEGLGLVAICEREDPTDAFVSNDYDNVNA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT+SLRR+A L +R D+ + RG + TRL KL+ AI+LA +G+KRL Sbjct: 119 LPHGAVVGTASLRREAQLRAYRPDLEIRTLRGNVNTRLAKLDAGDYQAIVLASSGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ L P+ GQGA+ IE +++ + +++ ++H D+ D V ERA L Sbjct: 179 FHDRIRYCLPDSISLPAVGQGALGIECRLDDAELIAMLEPLDHRDSSDRVKAERALNRRL 238 Query: 241 DGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G C+ IA +A + L+ G+V A DG V R + +GR+ A+ + + Sbjct: 239 QGGCQVPIAAYALLEDNDMLWLRGLVGAVDGTQVFRVEGRAPRSEGERLGRELAEDLLAL 298 Query: 300 SNKNVF 305 V Sbjct: 299 GADKVL 304 >gi|261867394|ref|YP_003255316.1| porphobilinogen deaminase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412726|gb|ACX82097.1| porphobilinogen deaminase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 308 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K +I TR SPLAL A + L ++ P N+ ++P+ TKGD I + L +IGG Sbjct: 1 MTQKSLKIATRQSPLALWQANYVKDLLQQLY--PDLNVELVPMVTKGDVILDSPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L++ E D AVHS KD+P + +GL ++ RED RD F+S++ ++L + Sbjct: 59 KGLFVKELENALLNKEADIAVHSMKDVPMQFPEGLGLAVICKREDPRDAFVSNSYRTLAE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+ RL Sbjct: 119 LPQGAVVGTSSLRRQCQLKTLRPDLEIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I +++E P+ GQGA+ IE ++ Q+L+ + +T V ERA L Sbjct: 179 LAERIASFIDVEQSLPAAGQGAVGIECRTDDVAVQQLLAPLADAETTSCVLAERAMNHHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I G+A + S LY +V + DG +A +G A+ + Sbjct: 239 QGGCQVPIGGYAVLRDSELYLRALVGSVDGSTIIRAEGKSAVENADVLGVQIAEQLLAQG 298 Query: 301 NKNVF 305 + Sbjct: 299 ADKIL 303 >gi|152983553|ref|YP_001351322.1| porphobilinogen deaminase [Pseudomonas aeruginosa PA7] gi|167008817|sp|A6VE37|HEM3_PSEA7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|150958711|gb|ABR80736.1| porphobilinogen deaminase [Pseudomonas aeruginosa PA7] Length = 313 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P++++GD++ + L +IGG Sbjct: 1 MSSREIRIATRQSALALWQAEYVKARLEQAH--PDLTVTLLPMTSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++++D P+ GQGA+ IE + L+ ++H DT V ERA L Sbjct: 179 FESRIRSSISVDDSLPAGGQGAVGIECRTADADLHALLAPLHHADTALRVTAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V DG A +G A + Sbjct: 239 NGGCQVPIACYAIREGDQLWLRGLVGQPDGSQLLRAEGRAPLAQAEALGVQVADDLLAQG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AEAIL 303 >gi|165976435|ref|YP_001652028.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190150336|ref|YP_001968861.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303251057|ref|ZP_07337243.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253601|ref|ZP_07339739.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307245920|ref|ZP_07528003.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307248006|ref|ZP_07530035.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307252646|ref|ZP_07534539.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307257056|ref|ZP_07538831.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307259334|ref|ZP_07541061.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307261494|ref|ZP_07543163.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263677|ref|ZP_07545286.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|165876536|gb|ABY69584.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189915467|gb|ACE61719.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302647521|gb|EFL77739.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650067|gb|EFL80237.1| porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306853139|gb|EFM85361.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306855404|gb|EFM87578.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306859891|gb|EFM91911.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306864427|gb|EFM96335.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306866570|gb|EFM98431.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306868777|gb|EFN00585.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870990|gb|EFN02725.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 314 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 110/304 (36%), Positives = 163/304 (53%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K RI TR SPLAL A + L + P ++ ++ + TKGD I + L +IGGK Sbjct: 6 MKDTLRIATRQSPLALWQANFVKDELEK--RFPELSVELVTMVTKGDVILDTPLAKIGGK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L Sbjct: 64 GLFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDEL 123 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 124 PAGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGM 183 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I+ +++E P+ GQGA+ IET V++ + + +NH T V ERA L Sbjct: 184 PERIRSFISVEQSLPAAGQGAVGIETRVDDERVLNYLATLNHNPTACCVIAERAMNTRLQ 243 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I GFA G+ + +V A DG S +R +A +G A+ + Sbjct: 244 GGCQVPIGGFATLNGNEITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQLLAQGA 303 Query: 302 KNVF 305 + Sbjct: 304 DKIL 307 >gi|306844857|ref|ZP_07477440.1| porphobilinogen deaminase [Brucella sp. BO1] gi|306274789|gb|EFM56570.1| porphobilinogen deaminase [Brucella sp. BO1] Length = 314 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 143/305 (46%), Positives = 198/305 (64%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGK Sbjct: 7 KNGTLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGK 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFTEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL Sbjct: 67 GLFTEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDL 126 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL Sbjct: 127 PQGATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGL 186 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 VI ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LD Sbjct: 187 ADVITDLLDPSVFPPAPGQGAIGIESRIGDERIDALLAPLAHRETQIALACERAFLGSLD 246 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ Sbjct: 247 GSCRTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGAVSDAAALGTDAANRVRAMAG 306 Query: 302 KNVFN 306 + F+ Sbjct: 307 PHFFD 311 >gi|308188851|ref|YP_003932982.1| Porphobilinogen deaminase [Pantoea vagans C9-1] gi|308059361|gb|ADO11533.1| Porphobilinogen deaminase [Pantoea vagans C9-1] Length = 317 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 168/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K FRI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG Sbjct: 5 MLDKIFRIATRQSPLALWQAHYVQQRLMSAH--PGLRVELVPMVTKGDIILDTPLAKVGG 62 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E + G D AVHS KD+P +GL + R+D RD F+SH S+ Sbjct: 63 KGLFVKELELAMQDGRADMAVHSMKDVPVSFPEGLGLVTICERDDPRDAFVSHHYDSIDA 122 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R D+ + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 123 LPQGAVVGTSSLRRQCQISARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 182 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I++ + E P+ GQGA+ IE +N+ +L++ +NH+DT V ERA L Sbjct: 183 MQDRIRQAMPAEVSLPAVGQGAVGIECRLNDSVLIDLLRALNHDDTEVCVRAERAMNTRL 242 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA +G L+ G+V A DG++ R G R A +G A + Sbjct: 243 EGGCQVPIGSFAVLEGDELWLRGMVGAPDGRVMVSGERRGPRAQAEQMGISLADELLNGG 302 Query: 301 NKNVF 305 + + Sbjct: 303 AREIL 307 >gi|293390862|ref|ZP_06635196.1| porphobilinogen deaminase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951396|gb|EFE01515.1| porphobilinogen deaminase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 308 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K +I TR SPLAL A + L ++ P N+ ++P+ TKGD I + L +IGG Sbjct: 1 MTQKSLKIATRQSPLALWQANYVKDRLQQLY--PDLNVELVPMVTKGDVILDSPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L++ E D AVHS KD+P + +GL ++ RED RD F+S++ ++L + Sbjct: 59 KGLFVKELENALLNKEADIAVHSMKDVPMQFPEGLGLAVICKREDPRDAFVSNSYRTLAE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L + R D+ + RG + TRL+KL+N AI+LA AG+ RL Sbjct: 119 LPQGAVVGTSSLRRQCQLKKLRPDLEIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I +++E P+ GQGA+ IE ++ Q+L+ + +T V ERA L Sbjct: 179 LAERIASFIDVEQSLPAAGQGAVGIECRTDDVAVQQLLAPLADAETTSCVLAERAMNHHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I G+A + S LY +V + DG +A +G A + Sbjct: 239 QGGCQVPIGGYAVLRDSELYLRALVGSVDGSTIIRAEGKSAVENADVLGVQIADQLLAQG 298 Query: 301 NKNVF 305 + Sbjct: 299 ADKIL 303 >gi|332290269|ref|YP_004421121.1| porphobilinogen deaminase [Gallibacterium anatis UMN179] gi|330433165|gb|AEC18224.1| porphobilinogen deaminase [Gallibacterium anatis UMN179] Length = 309 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+K RI TR SPLAL A + L ++ P + ++ + TKGD + + L +IGG Sbjct: 1 MQKDVLRIATRQSPLALWQANYIKHKLQVLY--PQLTVELVTMVTKGDVLLDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P + +GL +S RED RD F+S+ SL + Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPMQFPQGLHLSVICEREDPRDAFVSNRYASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++V+GTSSLRR+ L R DI + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPQNAVVGTSSLRRQCQLKALRPDIELKTLRGNVGTRLRKLDEGEYDAIILASAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +++ I+ + E P+ GQGA+ +E ++ +L+K + H+DTWD V ERA L Sbjct: 179 EQQRIRSFIAPEVSLPAVGQGAVGVECRQDDEWVNQLLKPLLHQDTWDRVIAERAMNNRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A G L+ +V A DG R A +G A+ + Sbjct: 239 QGGCQVPIAGYAILDGEQLFLRALVGAVDGSKVLRAEATAVRSQAEQLGIQVAEMLLAQG 298 Query: 301 NKNVF 305 +++ Sbjct: 299 AQDLL 303 >gi|288940050|ref|YP_003442290.1| porphobilinogen deaminase [Allochromatium vinosum DSM 180] gi|288895422|gb|ADC61258.1| porphobilinogen deaminase [Allochromatium vinosum DSM 180] Length = 308 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 170/305 (55%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLA+ A + L +H P + II ++TKGD++ + L+++GG Sbjct: 1 MSN-SIRIATRKSPLAMWQAEHVTARLKALH--PGLTVEIIGMTTKGDQLLDSPLSKVGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ +++GE D AVHS KD+P + +GL ++ + RE+ D F+S+T +L + Sbjct: 58 KGLFVKELEQGMLAGEADIAVHSMKDVPVEFPEGLHLAVIMERENPYDAFVSNTYANLAE 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+ L R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 118 LPEGACVGTSSLRRQCQLADRRPDLRIEPLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ ++ D P+ GQGAI IE V++ + +L+ + DT D V ERA A L Sbjct: 178 FESRIRDCIDPVDSLPAIGQGAIGIECRVDDERVHQLIAPLADRDTTDRVLAERAMNARL 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I G A G L G+V +DG +G R +A IG A + Sbjct: 238 NGGCQVPIGGHAVLDGDRLILKGLVGTTDGSRILRAEASGPRAEAEAIGVRVADDLLGQG 297 Query: 301 NKNVF 305 + Sbjct: 298 ADAIL 302 >gi|227357162|ref|ZP_03841531.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Proteus mirabilis ATCC 29906] gi|227162694|gb|EEI47661.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Proteus mirabilis ATCC 29906] Length = 313 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A + L H P + ++P+ TKGD I + L ++GG Sbjct: 1 MPKSTIRIATRQSPLAMWQALYVKEQLQIAH--PSLVVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+S D AVHS KD+P +GL + RED RD F+S+ SL+ Sbjct: 59 KGLFVKELELALLSSRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYDSLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL+KL+N AI+LA AG+KRLK Sbjct: 119 LPAGSVVGTSSLRRQCQLKALRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ E P+ GQGA+ IE +++ Q L+ +NH DT V ERA L Sbjct: 179 LTERIRSSLSAEQSLPAVGQGAVGIECRLDDHDTQALLAALNHADTATCVKAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + ++ +V + DGK R + DA G A+ + Sbjct: 239 EGGCQVPIGSYAIWQNDKIWLRALVGSPDGKTILRGERLVSPEDAEQAGISLAEELLDKG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|330890195|gb|EGH22856.1| porphobilinogen deaminase [Pseudomonas syringae pv. mori str. 301020] Length = 313 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL + Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HED V ER+ L Sbjct: 179 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDPAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G + + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPAGSVLLHAEARAPQTSAQALGVQVAEALLAQG 298 Query: 301 NKNVF 305 ++ Sbjct: 299 GADIL 303 >gi|330957337|gb|EGH57597.1| porphobilinogen deaminase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 313 Score = 278 bits (710), Expect = 8e-73, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLIVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPPGLGLFCICEREDPRDAFVSNTFDSLET 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FEDRITSSISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G + + A +G + A+ + Sbjct: 239 NGGCQVPIACYAVLEGDNVWLRGLVGDPSGSLLLHAEARAPQTAAQALGVEVAEALLAQG 298 Query: 301 NKNVF 305 ++ Sbjct: 299 AADIL 303 >gi|197287145|ref|YP_002153017.1| porphobilinogen deaminase [Proteus mirabilis HI4320] gi|238058999|sp|B4F1X3|HEM3_PROMH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|194684632|emb|CAR46538.1| porphobilinogen deaminase [Proteus mirabilis HI4320] Length = 313 Score = 278 bits (710), Expect = 8e-73, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A + L H P + ++P+ TKGD I + L ++GG Sbjct: 1 MSKSTIRIATRQSPLAMWQALYVKEQLQIAH--PSLVVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+S D AVHS KD+P +GL + RED RD F+S+ SL+ Sbjct: 59 KGLFVKELELALLSSRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYDSLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL+KL+N AI+LA AG+KRLK Sbjct: 119 LPAGSVVGTSSLRRQCQLKALRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ E P+ GQGA+ IE +++ Q L+ +NH DT V ERA L Sbjct: 179 LTERIRSSLSAEQSLPAVGQGAVGIECRLDDHDTQALLAALNHADTATCVKAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + ++ +V + DG+ R + DA G A+ + Sbjct: 239 EGGCQVPIGSYAIWQNGKIWLRALVGSPDGETILRGERLVSPEDAEQAGISLAEELLDKG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|315634981|ref|ZP_07890262.1| hydroxymethylbilane synthase [Aggregatibacter segnis ATCC 33393] gi|315476243|gb|EFU66994.1| hydroxymethylbilane synthase [Aggregatibacter segnis ATCC 33393] Length = 346 Score = 278 bits (710), Expect = 9e-73, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M KK +I TR SPLAL A ++ L ++ P +I ++ + TKGD I + L +IGG Sbjct: 39 MFKKTLKIATRQSPLALWQANFVKARLQQLY--PDLSIELVTMVTKGDVILDSPLAKIGG 96 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L++ E D AVHS KD+P + +GL +S RED RD F+S+T ++L + Sbjct: 97 KGLFVKELENALLNNEADIAVHSMKDVPMQFPEGLGLSVICKREDPRDAFVSNTYRTLAE 156 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+ RL Sbjct: 157 LPPGAIVGTSSLRRQCQLKALRPDLEIRSLRGNVGTRLSKLDNGDFDAIILASAGLIRLG 216 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I + +E P+ GQGA+ IE N+ + ++L+ + +T V ERA L Sbjct: 217 LADRITSFIEVEQSLPAAGQGAVGIECRTNDEQVKQLLAPLADVETTYCVLAERAMNNRL 276 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I G+A + S L +V + DG +A +G A+ + Sbjct: 277 QGGCQVPIGGYAVLRESMLNLRALVGSVDGSTIIRAEGQSAVENAEILGVQIAEQLLAQG 336 Query: 301 NKNVF 305 + Sbjct: 337 ADKIL 341 >gi|306842959|ref|ZP_07475593.1| porphobilinogen deaminase [Brucella sp. BO2] gi|306286887|gb|EFM58412.1| porphobilinogen deaminase [Brucella sp. BO2] Length = 314 Score = 278 bits (710), Expect = 9e-73, Method: Composition-based stats. Identities = 143/305 (46%), Positives = 198/305 (64%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGK Sbjct: 7 KNGTLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGK 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFTEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL Sbjct: 67 GLFTEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDL 126 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL Sbjct: 127 PQGATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGL 186 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 VI ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LD Sbjct: 187 ADVITDLLDPSVFPPAPGQGAIGIESRIGDERIDALLAPLAHRETQIALACERAFLGALD 246 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ Sbjct: 247 GSCRTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAG 306 Query: 302 KNVFN 306 + F+ Sbjct: 307 PHFFD 311 >gi|296046581|gb|ADG86432.1| hydroxymethylbilane synthase [Francisella novicida] Length = 317 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 107/307 (34%), Positives = 161/307 (52%), Gaps = 4/307 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M++ RI TR S LAL A ++ L H N+ ++P++TKGD I + L ++GG Sbjct: 1 MKQTTVRIATRKSALALWQAEYVKAQLEHFHD--GINVELVPMTTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ D AVHS KD+P +GL + PRED RD F+S+T +SL D Sbjct: 59 KGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLEVICPREDPRDAFVSNTIKSLSD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+ RL+ Sbjct: 119 LPQGSIVGTSSLRRQCQLKASRPDLDIRDLRGNVNTRLRKLDEGQYDAIILAAAGLIRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I + + E+ P+ GQGA+ IE ++ + L+ + T V ERA L Sbjct: 179 MSERIAQFIEPEEMLPANGQGAVGIECRNDDATIKALLAPLECATTRIRVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 G C+ I + G ++ G+V + DG E G + +G AQ + Sbjct: 239 QGGCQVPIGSYGVISADGKNIHLRGLVGSVDGSEMIESEITGPVEEGEALGNKLAQELLS 298 Query: 299 ISNKNVF 305 + Sbjct: 299 RGADKIL 305 >gi|240949414|ref|ZP_04753755.1| porphobilinogen deaminase [Actinobacillus minor NM305] gi|240296163|gb|EER46819.1| porphobilinogen deaminase [Actinobacillus minor NM305] Length = 308 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 108/304 (35%), Positives = 160/304 (52%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K RI TR SPLAL A ++ L P I ++ + TKGD I + L +IGGK Sbjct: 1 MKDTLRIATRQSPLALWQANFVKAELEK--HFPELQIELVTMVTKGDIILDTPLAKIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L Sbjct: 59 GLFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNQYQNLDEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSSLRR+ L+ + + RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 119 PKGAVVGTSSLRRQCQLMAAYPHLEIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGM 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I+ +++E P+ GQGA+ IET +++ + + +NH+ T V ERA A L Sbjct: 179 PERIRSFISVEQSLPAAGQGAVGIETRLDDQRVLSYLAKLNHQPTAYRVIAERAMNAHLQ 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I GFA + L +V + DG S A +G + A + Sbjct: 239 GGCQVPIGGFATLENDELTLNALVGSLDGSTIIRASGVAPVDKAEQLGIEVATKLLAQGA 298 Query: 302 KNVF 305 + Sbjct: 299 DKIL 302 >gi|327479188|gb|AEA82498.1| porphobilinogen deaminase [Pseudomonas stutzeri DSM 4166] Length = 312 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 164/305 (53%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG Sbjct: 1 MS-REIRIATRKSALALWQAEYVKARLEASH--PGLKVSLVPMVSRGDKLLDAPLAKIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 58 KGLFVKELETALLENEADIAVHSMKDVPMEFPEGLGLYCICEREDPRDAFVSNRFDSLDA 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 118 LPPGSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ + +++ P+ GQGA+ IE + + L+ +NH T V ERA L Sbjct: 178 FGERIRSSIGVDESLPAGGQGAVGIECRTGDSEVHALLACLNHAPTATRVVAERALNKRL 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V DG + +A +G A+ + Sbjct: 238 NGGCQVPIACYAVLEGEQLWLRGLVGQPDGTLLLRAEGRAPAAEAEALGVQVAEELLDQG 297 Query: 301 NKNVF 305 + + Sbjct: 298 AEQIL 302 >gi|146280919|ref|YP_001171072.1| porphobilinogen deaminase [Pseudomonas stutzeri A1501] gi|145569124|gb|ABP78230.1| porphobilinogen deaminase [Pseudomonas stutzeri A1501] Length = 314 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 164/305 (53%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG Sbjct: 3 MS-REIRIATRKSALALWQAEYVKARLEASH--PGLKVSLVPMVSRGDKLLDAPLAKIGG 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P + +GL + RED RD F+S+ SL Sbjct: 60 KGLFVKELETALLENEADIAVHSMKDVPMEFPEGLGLYCICEREDPRDAFVSNRFDSLDA 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 120 LPPGSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 179 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ + +++ P+ GQGA+ IE + + L+ +NH T V ERA L Sbjct: 180 FGERIRSSIGVDESLPAGGQGAVGIECRTGDSEVHALLACLNHAPTATRVVAERALNKRL 239 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V DG + +A +G A+ + Sbjct: 240 NGGCQVPIACYAVLEGEQLWLRGLVGQPDGTLLLRAEGRAPAAEAEALGVQVAEELLDQG 299 Query: 301 NKNVF 305 + + Sbjct: 300 AEQIL 304 >gi|71738146|ref|YP_272379.1| porphobilinogen deaminase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558699|gb|AAZ37910.1| porphobilinogen deaminase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 328 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 16 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL + Sbjct: 74 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 133 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 134 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 193 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 194 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 253 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G + + A +G A+ + Sbjct: 254 NGGCQVPIACYAVLEGDDVWLRGLVGDPAGSVLLHAEARAPQTSAQALGVQVAEALLAQG 313 Query: 301 NKNVF 305 ++ Sbjct: 314 AADIL 318 >gi|325124236|gb|ADY83759.1| porphobilinogen deaminase [Acinetobacter calcoaceticus PHEA-2] Length = 309 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 110/303 (36%), Positives = 169/303 (55%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKG Sbjct: 5 MKTLKIATRQSPLALWQAEHIRARLEELH--PDLTVELVKFVTQGDKILDTPLAKIGGKG 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ ++ DL Sbjct: 63 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNRFETFADLP 122 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL+ + AI+LA AG+KRL Sbjct: 123 QGAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDEGQYDAIILASAGLKRLGLS 182 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ L + P+ GQGA+ +E + L++ + HE+T V ERAF A L+G Sbjct: 183 ERIRHCLTPDISLPAVGQGALGLECRAVDQDVLALIQPLLHEETDVCVRAERAFNAYLEG 242 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+A + ++ G V + DG+ +A +G + A+ + Sbjct: 243 GCQVPIAGYATLQNGQIHIEGRVGSPDGQTLLRAELTDEANNAQQLGENLARNLLDQGAG 302 Query: 303 NVF 305 + Sbjct: 303 ELL 305 >gi|62290744|ref|YP_222537.1| porphobilinogen deaminase [Brucella abortus bv. 1 str. 9-941] gi|82700655|ref|YP_415229.1| porphobilinogen deaminase [Brucella melitensis biovar Abortus 2308] gi|189024957|ref|YP_001935725.1| porphobilinogen deaminase [Brucella abortus S19] gi|225853324|ref|YP_002733557.1| porphobilinogen deaminase [Brucella melitensis ATCC 23457] gi|254690032|ref|ZP_05153286.1| porphobilinogen deaminase [Brucella abortus bv. 6 str. 870] gi|254694521|ref|ZP_05156349.1| porphobilinogen deaminase [Brucella abortus bv. 3 str. Tulya] gi|254696146|ref|ZP_05157974.1| porphobilinogen deaminase [Brucella abortus bv. 2 str. 86/8/59] gi|254731064|ref|ZP_05189642.1| porphobilinogen deaminase [Brucella abortus bv. 4 str. 292] gi|256045496|ref|ZP_05448379.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. Rev.1] gi|256112222|ref|ZP_05453143.1| porphobilinogen deaminase [Brucella melitensis bv. 3 str. Ether] gi|256258286|ref|ZP_05463822.1| porphobilinogen deaminase [Brucella abortus bv. 9 str. C68] gi|256263189|ref|ZP_05465721.1| porphobilinogen deaminase [Brucella melitensis bv. 2 str. 63/9] gi|260546007|ref|ZP_05821747.1| porphobilinogen deaminase [Brucella abortus NCTC 8038] gi|260562805|ref|ZP_05833291.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M] gi|260755568|ref|ZP_05867916.1| porphobilinogen deaminase [Brucella abortus bv. 6 str. 870] gi|260758791|ref|ZP_05871139.1| porphobilinogen deaminase [Brucella abortus bv. 4 str. 292] gi|260760515|ref|ZP_05872858.1| porphobilinogen deaminase [Brucella abortus bv. 2 str. 86/8/59] gi|260884592|ref|ZP_05896206.1| porphobilinogen deaminase [Brucella abortus bv. 9 str. C68] gi|261214839|ref|ZP_05929120.1| porphobilinogen deaminase [Brucella abortus bv. 3 str. Tulya] gi|265991918|ref|ZP_06104475.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. Rev.1] gi|265993649|ref|ZP_06106206.1| porphobilinogen deaminase [Brucella melitensis bv. 3 str. Ether] gi|297247130|ref|ZP_06930848.1| porphobilinogen deaminase [Brucella abortus bv. 5 str. B3196] gi|23821695|sp|Q8YJB0|HEM3_BRUME RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|75496218|sp|Q57B08|HEM3_BRUAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123768401|sp|Q2YLM5|HEM3_BRUA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238058730|sp|B2S842|HEM3_BRUA1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800235|sp|C0RFD1|HEM3_BRUMB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|62196876|gb|AAX75176.1| HemC, porphobilinogen deaminase [Brucella abortus bv. 1 str. 9-941] gi|82616756|emb|CAJ11843.1| Porphobilinogen deaminase [Brucella melitensis biovar Abortus 2308] gi|189020529|gb|ACD73251.1| Porphobilinogen deaminase [Brucella abortus S19] gi|225641689|gb|ACO01603.1| porphobilinogen deaminase [Brucella melitensis ATCC 23457] gi|260096114|gb|EEW79990.1| porphobilinogen deaminase [Brucella abortus NCTC 8038] gi|260152821|gb|EEW87913.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M] gi|260669109|gb|EEX56049.1| porphobilinogen deaminase [Brucella abortus bv. 4 str. 292] gi|260670947|gb|EEX57768.1| porphobilinogen deaminase [Brucella abortus bv. 2 str. 86/8/59] gi|260675676|gb|EEX62497.1| porphobilinogen deaminase [Brucella abortus bv. 6 str. 870] gi|260874120|gb|EEX81189.1| porphobilinogen deaminase [Brucella abortus bv. 9 str. C68] gi|260916446|gb|EEX83307.1| porphobilinogen deaminase [Brucella abortus bv. 3 str. Tulya] gi|262764630|gb|EEZ10551.1| porphobilinogen deaminase [Brucella melitensis bv. 3 str. Ether] gi|263002984|gb|EEZ15277.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. Rev.1] gi|263093111|gb|EEZ17246.1| porphobilinogen deaminase [Brucella melitensis bv. 2 str. 63/9] gi|297174299|gb|EFH33646.1| porphobilinogen deaminase [Brucella abortus bv. 5 str. B3196] gi|326539601|gb|ADZ87816.1| porphobilinogen deaminase [Brucella melitensis M5-90] Length = 314 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 143/305 (46%), Positives = 198/305 (64%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGK Sbjct: 7 KNGTLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGK 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFTEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL Sbjct: 67 GLFTEEIEQALKDGRIDIAVHSTKDMPTALPEGLHLSVFLEREDPRDAFIGRSARRFMDL 126 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL Sbjct: 127 PQGATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGL 186 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 VI ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LD Sbjct: 187 ADVITDVLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALD 246 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ Sbjct: 247 GSCRTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAG 306 Query: 302 KNVFN 306 + F+ Sbjct: 307 PHFFD 311 >gi|23502739|ref|NP_698866.1| porphobilinogen deaminase [Brucella suis 1330] gi|161619804|ref|YP_001593691.1| porphobilinogen deaminase [Brucella canis ATCC 23365] gi|163843911|ref|YP_001628315.1| porphobilinogen deaminase [Brucella suis ATCC 23445] gi|254704902|ref|ZP_05166730.1| porphobilinogen deaminase [Brucella suis bv. 3 str. 686] gi|254707583|ref|ZP_05169411.1| porphobilinogen deaminase [Brucella pinnipedialis M163/99/10] gi|254708880|ref|ZP_05170691.1| porphobilinogen deaminase [Brucella pinnipedialis B2/94] gi|256030406|ref|ZP_05444020.1| porphobilinogen deaminase [Brucella pinnipedialis M292/94/1] gi|256059864|ref|ZP_05450051.1| porphobilinogen deaminase [Brucella neotomae 5K33] gi|256158389|ref|ZP_05456287.1| porphobilinogen deaminase [Brucella ceti M490/95/1] gi|256253808|ref|ZP_05459344.1| porphobilinogen deaminase [Brucella ceti B1/94] gi|256370288|ref|YP_003107799.1| porphobilinogen deaminase [Brucella microti CCM 4915] gi|260169315|ref|ZP_05756126.1| porphobilinogen deaminase [Brucella sp. F5/99] gi|260567624|ref|ZP_05838094.1| porphobilinogen deaminase [Brucella suis bv. 4 str. 40] gi|261220941|ref|ZP_05935222.1| porphobilinogen deaminase [Brucella ceti B1/94] gi|261315070|ref|ZP_05954267.1| porphobilinogen deaminase [Brucella pinnipedialis M163/99/10] gi|261316373|ref|ZP_05955570.1| porphobilinogen deaminase [Brucella pinnipedialis B2/94] gi|261323834|ref|ZP_05963031.1| porphobilinogen deaminase [Brucella neotomae 5K33] gi|261755596|ref|ZP_05999305.1| porphobilinogen deaminase [Brucella suis bv. 3 str. 686] gi|261758828|ref|ZP_06002537.1| porphobilinogen deaminase [Brucella sp. F5/99] gi|265987445|ref|ZP_06100002.1| porphobilinogen deaminase [Brucella pinnipedialis M292/94/1] gi|265996901|ref|ZP_06109458.1| porphobilinogen deaminase [Brucella ceti M490/95/1] gi|38258150|sp|Q8FYI6|HEM3_BRUSU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189042875|sp|A9M8M2|HEM3_BRUC2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189042876|sp|B0CID9|HEM3_BRUSI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|23348756|gb|AAN30781.1| porphobilinogen deaminase [Brucella suis 1330] gi|161336615|gb|ABX62920.1| porphobilinogen deaminase [Brucella canis ATCC 23365] gi|163674634|gb|ABY38745.1| porphobilinogen deaminase [Brucella suis ATCC 23445] gi|256000451|gb|ACU48850.1| porphobilinogen deaminase [Brucella microti CCM 4915] gi|260157142|gb|EEW92222.1| porphobilinogen deaminase [Brucella suis bv. 4 str. 40] gi|260919525|gb|EEX86178.1| porphobilinogen deaminase [Brucella ceti B1/94] gi|261295596|gb|EEX99092.1| porphobilinogen deaminase [Brucella pinnipedialis B2/94] gi|261299814|gb|EEY03311.1| porphobilinogen deaminase [Brucella neotomae 5K33] gi|261304096|gb|EEY07593.1| porphobilinogen deaminase [Brucella pinnipedialis M163/99/10] gi|261738812|gb|EEY26808.1| porphobilinogen deaminase [Brucella sp. F5/99] gi|261745349|gb|EEY33275.1| porphobilinogen deaminase [Brucella suis bv. 3 str. 686] gi|262551369|gb|EEZ07359.1| porphobilinogen deaminase [Brucella ceti M490/95/1] gi|264659642|gb|EEZ29903.1| porphobilinogen deaminase [Brucella pinnipedialis M292/94/1] Length = 314 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 143/305 (46%), Positives = 198/305 (64%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGK Sbjct: 7 KNGTLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGK 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFTEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL Sbjct: 67 GLFTEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDL 126 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL Sbjct: 127 PQGATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGL 186 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 VI ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LD Sbjct: 187 ADVITDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALD 246 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ Sbjct: 247 GSCRTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAG 306 Query: 302 KNVFN 306 + F+ Sbjct: 307 PHFFD 311 >gi|159045244|ref|YP_001534038.1| porphobilinogen deaminase [Dinoroseobacter shibae DFL 12] gi|157913004|gb|ABV94437.1| porphobilinogen deaminase [Dinoroseobacter shibae DFL 12] Length = 347 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 127/303 (41%), Positives = 183/303 (60%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR S LALA A ETR+ L +P I+ + T GDRI +R+L+EIGGKGLF Sbjct: 40 PLKIGTRGSLLALAQAHETRARLSAAFDLPEEAFEIVVIKTTGDRIQDRSLSEIGGKGLF 99 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE ++ G ID AVHS KDMP GL + YLPRED+RD F++ +L DL Sbjct: 100 TREIEDAMLDGSIDIAVHSMKDMPVDTPAGLALDTYLPREDVRDAFVTLDGGTLADLPEG 159 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+G+SSLRR+A L R D+ +++FRG ++TR+ KL + AHA LA AG+ RL ++V Sbjct: 160 AVVGSSSLRRRAQLAHRRPDLQLVEFRGNVQTRMKKLGDGVAHATFLAMAGLNRLGMDEV 219 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + ED P+ QG I IE ++P+A E++ I+ + + CERA+L+ LDGSC Sbjct: 220 PRSAIAPEDMLPAVAQGCIGIERRADDPRAAEMLAAIHDGPSGHRLACERAYLSALDGSC 279 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A G +++ +L DG S DA +GR+ A+ +R + Sbjct: 280 QTPIAGLAELDGGSIHLRAEILRPDGSEVLSDSETAPVEDAAKMGREVAERLRARAPDGF 339 Query: 305 FNF 307 F++ Sbjct: 340 FSW 342 >gi|88861269|ref|ZP_01135901.1| porphobilinogen deaminase [Pseudoalteromonas tunicata D2] gi|88816750|gb|EAR26573.1| porphobilinogen deaminase [Pseudoalteromonas tunicata D2] Length = 312 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 106/301 (35%), Positives = 165/301 (54%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR S LAL A ++ L H P + ++P+ST+GD+I + L +IGGKGLF Sbjct: 7 TLRIATRKSALALWQAEFVKAQLEIHH--PGIQVELVPMSTQGDKILDTPLAKIGGKGLF 64 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E+ ++ G D AVHS KD+P + +GL+++ RED RD F+S+ +++++L Sbjct: 65 VKELEQAMLEGRADIAVHSMKDVPVEFPEGLELNTICEREDPRDAFVSNRFKTIEELPQG 124 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+ + R D+ + D RG + TRL KL+ + AI+LA AG+ RL+ + Sbjct: 125 AVVGTSSLRRQCQIRALRPDLEIRDLRGNVNTRLAKLDEGQYDAIILAAAGLIRLEMPQR 184 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + E P+ GQGA+ IE ++ ++L+ + H +T V ERA L+G C Sbjct: 185 IASFIEPEQSLPANGQGAVGIECRSDDITTKQLLAALEHTETRIRVLAERAMNRRLEGGC 244 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I FA G + G+V A DG G DA +G + A + + Sbjct: 245 QVPIGAFAQVSGEHITIRGLVGAIDGSEILRDQVQGLCADAEQLGVELANKLLAQGADKI 304 Query: 305 F 305 Sbjct: 305 L 305 >gi|289625848|ref|ZP_06458802.1| porphobilinogen deaminase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646420|ref|ZP_06477763.1| porphobilinogen deaminase [Pseudomonas syringae pv. aesculi str. 2250] gi|298484668|ref|ZP_07002771.1| Porphobilinogen deaminase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160808|gb|EFI01826.1| Porphobilinogen deaminase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320326724|gb|EFW82769.1| porphobilinogen deaminase [Pseudomonas syringae pv. glycinea str. B076] gi|320331302|gb|EFW87245.1| porphobilinogen deaminase [Pseudomonas syringae pv. glycinea str. race 4] gi|330867941|gb|EGH02650.1| porphobilinogen deaminase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330881670|gb|EGH15819.1| porphobilinogen deaminase [Pseudomonas syringae pv. glycinea str. race 4] Length = 313 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL + Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G + + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPAGSVLLHAEARAPQTSAQALGVQVAEALLAQG 298 Query: 301 NKNVF 305 ++ Sbjct: 299 AADIL 303 >gi|304398148|ref|ZP_07380023.1| porphobilinogen deaminase [Pantoea sp. aB] gi|304354434|gb|EFM18806.1| porphobilinogen deaminase [Pantoea sp. aB] Length = 317 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K FRI TR SPLAL A + LM H P + ++P+ TKGD I + L ++GG Sbjct: 5 MLDKIFRIATRQSPLALWQAHYVQQRLMSAH--PGLRVELVPMVTKGDIILDTPLAKVGG 62 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E + G D AVHS KD+P +GL + R+D RD F+SH S+ Sbjct: 63 KGLFVKELELAMQDGRADMAVHSMKDVPVSFPEGLGLVTICERDDPRDAFVSHHYDSIDA 122 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ + R D+ + RG + TRL KL+ + AI+LA AG+KRL Sbjct: 123 LPQGAIVGTSSLRRQCQISARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLG 182 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I++ + E P+ GQGA+ IE +++ +L++ +NH+DT V ERA L Sbjct: 183 LEDRIRQAMPAEVSLPAVGQGAVGIECRLDDSVLIDLLRALNHDDTEVCVRAERAMNTRL 242 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I FA +G+ L+ G+V A DG++ R G R A +G A + Sbjct: 243 EGGCQVPIGSFAVLEGNDLWLRGMVGAPDGRVMVSGERRGPRAQAEQMGISLADELLNGG 302 Query: 301 NKNVF 305 + + Sbjct: 303 AREIL 307 >gi|37528461|ref|NP_931806.1| porphobilinogen deaminase [Photorhabdus luminescens subsp. laumondii TTO1] gi|55976477|sp|Q7MYN1|HEM3_PHOLL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|36787899|emb|CAE17016.1| porphobilinogen deaminase (PBG) (hydroxymethylbilane synthase) (HMBS) (pre-uroporphyrinogen synthase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 313 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A + L H P + ++P+ T+GD I + L +IGG Sbjct: 1 MSTKTIRIATRQSPLAMWQALYVQQKLQQCH--PDLEVQLVPMVTQGDVILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S SL + Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPISFPEGLGLVTICERDDPRDAFVSVKYHSLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ V D RG + TRLNKL+N AI+LA AG+KRLK Sbjct: 119 LPTGSIVGTSSLRRQCQLRELRPDLIVRDLRGNVGTRLNKLDNGHYDAIILAVAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L E P+ GQGA+ IE +++ + Q L+ +NH DT V ERA L Sbjct: 179 LHERIRTPLTAEQSLPAVGQGAVGIECRLDDQQTQTLLAPLNHYDTEVCVLAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + ++ +V A DG + R DA G + A+ + Sbjct: 239 EGGCQVPIGSYAIWQDGKIWLRALVGAPDGSVIIRGERTALPKDACQAGVELAEELLERG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|78224425|ref|YP_386172.1| porphobilinogen deaminase [Geobacter metallireducens GS-15] gi|123742774|sp|Q39QM7|HEM3_GEOMG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78195680|gb|ABB33447.1| Porphobilinogen deaminase [Geobacter metallireducens GS-15] Length = 318 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 164/305 (53%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A + L + P + ++ + T GD+I + L ++GG Sbjct: 1 MAPKQLRIGTRASQLALWQANWVKGELEKRY--PGMAVELVKIKTMGDKILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD IS + D Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISRGVKFA-D 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A +L+ R D+ ++ RG +ETR+ KL + A++LA AG+ RL Sbjct: 118 LPQGARIGTSALRRQAQILKVRPDLQMVVIRGNVETRIRKLTDENLDAVILAAAGLNRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + E L +E P+ GQGA+ IE +++ ++ + NH DT +V ERA L Sbjct: 178 FADQVSEYLPVELSLPAIGQGALGIECRLDDETIKDTIAFFNHPDTAHAVRAERALLWRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA G TL G V + DG + + +G + +G A+ + Sbjct: 238 EGGCQVPIAAHGQVSGDTLTLTGFVASVDGTRSVKDTISGPVTECEKLGIALAEKLLADG 297 Query: 301 NKNVF 305 + Sbjct: 298 AHEIL 302 >gi|325294021|ref|YP_004279885.1| Porphobilinogen deaminase [Agrobacterium sp. H13-3] gi|325061874|gb|ADY65565.1| Porphobilinogen deaminase [Agrobacterium sp. H13-3] Length = 309 Score = 277 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 172/306 (56%), Positives = 225/306 (73%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A+ETR+ LM H +P I+ LSTKGDRIT+R L+EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAYETRNRLMSAHGLPEDMFEIVVLSTKGDRITDRALSEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E +L+SGE+D AVHS+KDMPT L KGL +SA+LPRED+RD FI TA L + Sbjct: 61 KGLFTEELESQLLSGELDIAVHSSKDMPTVLPKGLYLSAFLPREDMRDAFIGRTAPKLLE 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+G++SLRR+AL+ R R D+SVI FRG++ETRL KL +A A LLA+AG+KRL Sbjct: 121 LPQGAVVGSASLRRQALIRRLRPDLSVIIFRGQVETRLRKLEEGQADATLLAFAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E V +IL+ +DFPP+P QGAIC+E+ + + + EL+ IN T+D+V CERAFLA L Sbjct: 181 MENVPTDILDPKDFPPAPAQGAICVESRIGDTRMDELLSPINDIPTYDAVTCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAGFA C G L+F G++L DG+ H V +G R DA ++GR A + +R + Sbjct: 241 DGSCRTPIAGFATCHGEELHFSGLILTPDGQTSHSVEISGARKDAEDLGRKAGEDVRARA 300 Query: 301 NKNVFN 306 N F+ Sbjct: 301 GSNFFD 306 >gi|39998374|ref|NP_954325.1| porphobilinogen deaminase [Geobacter sulfurreducens PCA] gi|55976461|sp|Q747I1|HEM3_GEOSL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|39985320|gb|AAR36675.1| porphobilinogen deaminase [Geobacter sulfurreducens PCA] gi|298507314|gb|ADI86037.1| hydroxymethylbilane synthase [Geobacter sulfurreducens KN400] Length = 318 Score = 277 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 168/305 (55%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR S LAL A +S L + P + ++ + T GD+I + L ++GG Sbjct: 1 MALNRLRIGTRASQLALWQANWVKSELEKRY--PGMEVELVKIKTIGDKILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD FIS+ + Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLVCITEREDPRDAFISNGVTFA-N 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A LL+ R D+ ++ RG +ETR+ KL +K A++LA AG+KRL Sbjct: 118 LPQGAKIGTSALRRQAQLLKVRPDLEMVIIRGNVETRIRKLTEDKLDAVILAAAGLKRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V+ E L ++ P+ GQGA+ +E +++ +E + NH DT +V ERA L Sbjct: 178 FTDVVTEYLPVDLSLPAIGQGALGLECRLDDQAVRETIDFFNHPDTAHAVRAERALLWRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA G +L G + + DG + S +G D +G A+ + Sbjct: 238 EGGCQVPIAAHGQVSGDSLTLTGFIASVDGTRSVKESISGPVTDCEKLGIALAEKLLADG 297 Query: 301 NKNVF 305 + Sbjct: 298 GHEIL 302 >gi|88813066|ref|ZP_01128308.1| porphobilinogen deaminase [Nitrococcus mobilis Nb-231] gi|88789699|gb|EAR20824.1| porphobilinogen deaminase [Nitrococcus mobilis Nb-231] Length = 309 Score = 277 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ RI TR SPLAL A + L + P + ++ ++T+GDRI + L IGG Sbjct: 1 MSRRRLRIATRKSPLALWQAEHVAAELRRRY--PELEVELVAMTTRGDRILDTPLARIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K LF +E+E+ + G D AVHS KD+P +L +G+ + L RED D F+++ Q L Sbjct: 59 KALFVKELERGIWEGRADIAVHSIKDVPAELPEGMHLPVVLEREDPCDAFVANLYQDLAA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + + +GT+SLRR+ L R D+ V RG ++TRL KL + K AI+LA AG++RL Sbjct: 119 LPIGARVGTASLRRECQLRAQRPDLRVGTLRGNVQTRLAKLESGKFDAIVLAAAGLRRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L E P+ GQGA+ IE ++ + EL+ + H ++ + ERA A L Sbjct: 179 LAERIRCTLTPEQSLPAVGQGALGIECRSDDREINELIAPLTHSPSYLRITAERAVNARL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +GSC+ IA FA GS ++ +V + DG G +++G A+ + Sbjct: 239 EGSCQVPIAAFAVLDGSNIWLRALVGSRDGSCVLRGEIRGPAGTGVSLGGQLAEDLLSRG 298 Query: 301 NKNVF 305 + Sbjct: 299 AAELL 303 >gi|257485539|ref|ZP_05639580.1| porphobilinogen deaminase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331011831|gb|EGH91887.1| porphobilinogen deaminase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 313 Score = 277 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL + Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G + + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPAGSVLLHAEARAPQTSAQALGVQVAEALLAQG 298 Query: 301 NKNVF 305 ++ Sbjct: 299 AADIL 303 >gi|299771850|ref|YP_003733876.1| porphobilinogen deaminase [Acinetobacter sp. DR1] gi|298701938|gb|ADI92503.1| porphobilinogen deaminase [Acinetobacter sp. DR1] Length = 309 Score = 277 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 110/303 (36%), Positives = 169/303 (55%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKG Sbjct: 5 MKTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKG 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 63 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLSLAVICEREDPLDAFVSNQFEKFADLP 122 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL Sbjct: 123 QGAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLS 182 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ L + P+ GQGA+ +E + L++ + HE+T V ERAF A L+G Sbjct: 183 ERIRHCLTPDISLPAVGQGALGLECRAADQDVLALIQPLLHEETDVCVRAERAFNAYLEG 242 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+A + ++ G V + DG+ +A +G + A+ + Sbjct: 243 GCQVPIAGYATLQNGQIHIEGRVGSPDGQTLLRAELTDEASNAHQLGENLARNLLDQGAG 302 Query: 303 NVF 305 + Sbjct: 303 ELL 305 >gi|330812535|ref|YP_004356997.1| porphobilinogen deaminase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380643|gb|AEA71993.1| porphobilinogen deaminase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 313 Score = 277 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MCPREIRIATRKSALALWQAEYVKARLEAAH--PGLIVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTFSSLEA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + L+ ++HEDT V ERA L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSADSDIHALLAPLHHEDTATRVFAERALNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V +G R DA +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGEQVWLRGLVGDPNGGRLLSAEARAPRHDAEALGVRVAEDLLSQG 298 Query: 301 NKNVF 305 ++ Sbjct: 299 AADIL 303 >gi|119947244|ref|YP_944924.1| porphobilinogen deaminase [Psychromonas ingrahamii 37] gi|166217780|sp|A1T0R0|HEM3_PSYIN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|119865848|gb|ABM05325.1| porphobilinogen deaminase [Psychromonas ingrahamii 37] Length = 310 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A +S L+ H P + ++P+ TKGD I + L ++GG Sbjct: 1 MTAQKIRIATRHSPLAMWQANFIKSELLKYH--PNLIVELLPMKTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL ++ RED D F+S+ + L + Sbjct: 59 KGLFVKELEVAILEGRADIAVHSIKDVPVDFPEGLGLTTICKREDPHDAFVSNHYKQLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR+ +L R DI + + RG + TRL KL+ + AI+LA AG+ RL+ Sbjct: 119 LPEGAIVGTCSLRRQCQILALRPDIIIKNLRGNVNTRLRKLDEGEYDAIILAAAGLMRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I ++ E P+ GQGA+ IE +++ + L+K + +T + ERA +L Sbjct: 179 MQHRITSLIAPEVSLPAVGQGAVGIECRLDDEQTITLLKPLEDPETRIRITAERAMNLKL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I FA + L+ G+V + DGK G++ DA +G A+ + Sbjct: 239 QGGCQVPIGSFAILENEQLFLRGLVGSVDGKQIIRKEITGHQNDAQQLGITLAEQLLACG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AEEIL 303 >gi|229593301|ref|YP_002875420.1| porphobilinogen deaminase [Pseudomonas fluorescens SBW25] gi|259646262|sp|C3K424|HEM3_PSEFS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|229365167|emb|CAY53424.1| porphobilinogen deaminase [Pseudomonas fluorescens SBW25] Length = 313 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 168/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLKVSLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYASLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPLGSIVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I +++ED P+ GQGA+ IE + L+K ++H DT V ERA L Sbjct: 179 FEDRITSAISVEDSLPAGGQGAVGIECRTADSDIHALLKPLDHHDTEVRVTAERALNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V +G G +CDA +G AQ + Sbjct: 239 NGGCQVPIACYAVLEGENLWLRGLVGDPEGGNLLTAEVRGPQCDATALGIQVAQALLDKG 298 Query: 301 NKNVF 305 + Sbjct: 299 AGAIL 303 >gi|260556364|ref|ZP_05828583.1| porphobilinogen deaminase [Acinetobacter baumannii ATCC 19606] gi|260410419|gb|EEX03718.1| porphobilinogen deaminase [Acinetobacter baumannii ATCC 19606] Length = 314 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 170/303 (56%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKG Sbjct: 10 MKTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKG 67 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 68 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLP 127 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL Sbjct: 128 QGAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLA 187 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G Sbjct: 188 ERIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEG 247 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+A + ++ G V + DG+ +A +G + A+ + Sbjct: 248 GCQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAG 307 Query: 303 NVF 305 ++ Sbjct: 308 DLL 310 >gi|17986460|ref|NP_539094.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M] gi|237816250|ref|ZP_04595243.1| porphobilinogen deaminase [Brucella abortus str. 2308 A] gi|17982057|gb|AAL51358.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M] gi|237788317|gb|EEP62532.1| porphobilinogen deaminase [Brucella abortus str. 2308 A] Length = 342 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 143/305 (46%), Positives = 198/305 (64%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGK Sbjct: 35 KNGTLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGK 94 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFTEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL Sbjct: 95 GLFTEEIEQALKDGRIDIAVHSTKDMPTALPEGLHLSVFLEREDPRDAFIGRSARRFMDL 154 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL Sbjct: 155 PQGATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGL 214 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 VI ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LD Sbjct: 215 ADVITDVLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALD 274 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ Sbjct: 275 GSCRTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAG 334 Query: 302 KNVFN 306 + F+ Sbjct: 335 PHFFD 339 >gi|225628089|ref|ZP_03786124.1| porphobilinogen deaminase [Brucella ceti str. Cudo] gi|225616914|gb|EEH13961.1| porphobilinogen deaminase [Brucella ceti str. Cudo] Length = 342 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 143/305 (46%), Positives = 198/305 (64%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGK Sbjct: 35 KNGTLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGK 94 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFTEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL Sbjct: 95 GLFTEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDL 154 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL Sbjct: 155 PQGATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGL 214 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 VI ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LD Sbjct: 215 ADVITDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALD 274 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ Sbjct: 275 GSCRTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAG 334 Query: 302 KNVFN 306 + F+ Sbjct: 335 PHFFD 339 >gi|260551059|ref|ZP_05825263.1| porphobilinogen deaminase [Acinetobacter sp. RUH2624] gi|260405826|gb|EEW99314.1| porphobilinogen deaminase [Acinetobacter sp. RUH2624] Length = 314 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 171/303 (56%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKG Sbjct: 10 MKTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKG 67 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 68 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLP 127 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRRK+ +L+ R D+ ++D RG + TRL+KL++ + AI+LA AG+KRL E Sbjct: 128 QGAKVGTSSLRRKSQILKQRPDLQIVDLRGNVGTRLSKLDDGQYDAIILASAGLKRLGLE 187 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ + P+ GQGA+ +E ++ L++ + H +T V ERAF A L+G Sbjct: 188 ERIRHCIEPSVSLPAVGQGALGLECRADDQDVLALIQPLLHTETDVCVRAERAFNAYLEG 247 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+A + ++ G V + DG+ +A +G + A+ + Sbjct: 248 GCQVPIAGYATLQDGKIHIEGRVGSPDGQTLLRAELTDEAHNAQQLGENLARNLLEQGAG 307 Query: 303 NVF 305 ++ Sbjct: 308 DLL 310 >gi|330985679|gb|EGH83782.1| porphobilinogen deaminase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 313 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL + Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ ++ AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDASEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FENRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G + + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGSVLLHAEARAPQTSAQALGVQVAEALLAQG 298 Query: 301 NKNVF 305 ++ Sbjct: 299 AADIL 303 >gi|15966832|ref|NP_387185.1| porphobilinogen deaminase [Sinorhizobium meliloti 1021] gi|307301660|ref|ZP_07581419.1| porphobilinogen deaminase [Sinorhizobium meliloti BL225C] gi|307316316|ref|ZP_07595760.1| porphobilinogen deaminase [Sinorhizobium meliloti AK83] gi|23821697|sp|Q92LH7|HEM3_RHIME RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|15076104|emb|CAC47658.1| Probable porphobilinogen deaminase [Sinorhizobium meliloti 1021] gi|306898156|gb|EFN28898.1| porphobilinogen deaminase [Sinorhizobium meliloti AK83] gi|306903358|gb|EFN33947.1| porphobilinogen deaminase [Sinorhizobium meliloti BL225C] Length = 309 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 156/305 (51%), Positives = 214/305 (70%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLA+A ETR L H +PP I+ LSTKGDRIT+R+L EIGG Sbjct: 1 MQTKPFRIGTRGSPLAMAQTHETRDRLAAAHGLPPEMFEIVILSTKGDRITDRSLAEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E++L+SG++D AVHS+KDMPTKL +GL +SA+LPREDIRD F+ +A+ L D Sbjct: 61 KGLFTEELEQQLLSGDLDFAVHSSKDMPTKLPEGLFLSAFLPREDIRDAFVGRSAKRLVD 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R DI VI +RG++ETRL KL + LLAYAG++RL Sbjct: 121 LPQGATVGSSSLRRQALIRRLRPDIDVITYRGQVETRLRKLAEGQVDGTLLAYAGLRRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E V E+L+ E+FPP+P QGAIC+E + + + L+ I+ T ++V+CER FLA L Sbjct: 181 MEHVPTELLDPEEFPPAPAQGAICVEARIGDDRINTLLAAIDDPRTHEAVSCERGFLATL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG+A G+ + F G++L DG H++ +G DA +G++A + IR + Sbjct: 241 DGSCRTPIAGYAQSDGTHIRFAGMILTPDGTTSHQIEIDGRAADAERLGQEAGERIRAKA 300 Query: 301 NKNVF 305 F Sbjct: 301 GPGFF 305 >gi|293610070|ref|ZP_06692371.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827302|gb|EFF85666.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 314 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 109/303 (35%), Positives = 167/303 (55%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKG Sbjct: 10 MKTLKIATRQSPLALWQAEHIRARLEELH--PDLTVELVKFVTQGDKILDTPLAKIGGKG 67 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 68 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLP 127 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL+ + AI+LA AG+KRL Sbjct: 128 QGAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDEGQYDAIILASAGLKRLGLS 187 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ L + P+ GQGA+ +E + L++ + H +T V ERAF A L+G Sbjct: 188 ERIRHCLTPDISLPAVGQGALGLECRAADQDVLALIQPLLHAETDVCVRAERAFNAYLEG 247 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+A + ++ G V + DG+ +A +G + A+ + Sbjct: 248 GCQVPIAGYATLQNGQIHIEGRVGSPDGQTLLRAELTDEANNAQQLGENLARNLLDQGAG 307 Query: 303 NVF 305 + Sbjct: 308 ELL 310 >gi|255320960|ref|ZP_05362133.1| porphobilinogen deaminase [Acinetobacter radioresistens SK82] gi|262379948|ref|ZP_06073103.1| porphobilinogen deaminase [Acinetobacter radioresistens SH164] gi|255301924|gb|EET81168.1| porphobilinogen deaminase [Acinetobacter radioresistens SK82] gi|262298142|gb|EEY86056.1| porphobilinogen deaminase [Acinetobacter radioresistens SH164] Length = 307 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 110/301 (36%), Positives = 166/301 (55%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKGLF Sbjct: 4 TLKIATRKSPLALWQAEHIRACLQELH--PGLTVELVTFVTQGDKILDTPLAKIGGKGLF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L+ G D AVHS KD+P L GL + RED D F+S+ + + L Sbjct: 62 VKELEAALLDGRADLAVHSMKDVPMHLPTGLSLPVICEREDPCDAFVSNRFEGFEQLPKG 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRRK +L+ R D++++D RG + TRL+KL+ + AI+LA AG+KRL + Sbjct: 122 ATVGTSSLRRKTQILKARPDLNILDLRGNVGTRLSKLDAGEYDAIILASAGLKRLGLSER 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 IK L+ E P+ GQGA+ +E ++ +L+ + HE T V ERAF + L+G C Sbjct: 182 IKHTLSPELSLPAVGQGALGLECRTDDQAILDLISPLQHEQTSICVRAERAFNSHLEGGC 241 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + IA +A + L G V + DG I +G A +G + A+ + + Sbjct: 242 QVPIAAYATLENGQLQLEGRVGSVDGLILLSSQVSGQPEHAEQLGIELAENLLSQGAGEL 301 Query: 305 F 305 Sbjct: 302 L 302 >gi|193076128|gb|ABO10737.2| porphobilinogen deaminase [Acinetobacter baumannii ATCC 17978] Length = 309 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 170/303 (56%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKG Sbjct: 5 MKTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKG 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 63 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLP 122 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL Sbjct: 123 QGAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLA 182 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G Sbjct: 183 ERIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEG 242 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+A + ++ G V + DG+ +A +G + A+ + Sbjct: 243 GCQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAG 302 Query: 303 NVF 305 ++ Sbjct: 303 DLL 305 >gi|184156604|ref|YP_001844943.1| porphobilinogen deaminase [Acinetobacter baumannii ACICU] gi|332874912|ref|ZP_08442763.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6014059] gi|183208198|gb|ACC55596.1| Porphobilinogen deaminase [Acinetobacter baumannii ACICU] gi|322506491|gb|ADX01945.1| hemC [Acinetobacter baumannii 1656-2] gi|323516370|gb|ADX90751.1| porphobilinogen deaminase [Acinetobacter baumannii TCDC-AB0715] gi|332736855|gb|EGJ67831.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6014059] Length = 309 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 170/303 (56%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKG Sbjct: 5 MKTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKG 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 63 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLP 122 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL Sbjct: 123 QGAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLA 182 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G Sbjct: 183 ERIRHCIEPSVSLPAVGQGALGLECRADDQEVLTLIQPLLHPETDVCVRAERAFNAYLEG 242 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+A + ++ G V + DG+ +A +G + A+ + Sbjct: 243 GCQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAG 302 Query: 303 NVF 305 ++ Sbjct: 303 DLL 305 >gi|2495175|sp|Q59684|HEM3_PROMI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|726359|gb|AAC44329.1| porphobilinogen deaminase [Proteus mirabilis] Length = 313 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 117/305 (38%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A + L H P + ++P+ TKGD I + L ++GG Sbjct: 1 MPKSTIRIATRQSPLAMWQALYVKEQLQIAH--PSLVVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+S D AVHS KD+P +GL + RED RD F+S+ SL+ Sbjct: 59 KGLFVKELELALLSSRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYDSLEQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL+KL+N AI+LA AG+KRLK Sbjct: 119 LPAGSVVGTSSLRRQCQLKALRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ E P+ GQGA+ IE +++ Q L+ +NH DT V ERA L Sbjct: 179 LTERIRSSLSAEQSLPAVGQGAVGIECRLDDHDTQALLAALNHADTATCVKAERAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + ++ +V A DGK R + DA G A+ + Sbjct: 239 EGGCQVPIGSYAIWQNDKIWLRALVGAPDGKTILRGERLVSPEDAEQAGISLAEELLDKG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|238918086|ref|YP_002931600.1| porphobilinogen deaminase, [Edwardsiella ictaluri 93-146] gi|238867654|gb|ACR67365.1| porphobilinogen deaminase, putative [Edwardsiella ictaluri 93-146] Length = 317 Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 113/302 (37%), Positives = 159/302 (52%), Gaps = 2/302 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL A R L+ + P I ++P+ T+GD + + L ++GGKGLF Sbjct: 11 TLRIATRQSPLALWQAHYVRDQLLA--QWPQLTIELVPMVTRGDVLLDTPLAKVGGKGLF 68 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L+ G D AVHS KD+P GL + RED RD F+S SL+ L Sbjct: 69 VKELELALLEGRADIAVHSMKDVPVAFPDGLGLVTICQREDPRDAFVSPRFASLEQLPPG 128 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SV+GTSSLRR+ L R D+ + D RG + TRL KL+ AI+LA AG+KRL+ E Sbjct: 129 SVVGTSSLRRQCQLRAARPDLQIRDLRGNVGTRLAKLDAGDYDAIILAAAGLKRLQLEDR 188 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ L E P+ GQGA+ IE + + + L+ +NH +T V ERA L+G C Sbjct: 189 IRTPLTPEQSLPAVGQGAVGIECRLADDATRRLLAPLNHAETALRVCAERAMNTRLEGGC 248 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I +A G L+ +V A DG + R G A +G A + + + Sbjct: 249 QVPIGSYAEIDGDRLWLRALVGAPDGSLMICGERRGPLAQAEAMGTALADELLARGARAI 308 Query: 305 FN 306 + Sbjct: 309 LD 310 >gi|330720492|gb|EGG98789.1| Porphobilinogen deaminase [gamma proteobacterium IMCC2047] Length = 312 Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 111/307 (36%), Positives = 162/307 (52%), Gaps = 3/307 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR S LAL A ++ L H+ + + + T+GD+I + L ++GG Sbjct: 1 MTNKLLRIATRGSQLALWQAEYVKARLEAAHE--NLQVELDIMKTRGDKILDVPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P + +GL ++ RE D F+S+ S Sbjct: 59 KGLFVKELETALLEKRADIAVHSMKDVPMEFPEGLGLAVICEREQPTDAFVSNHFASFDS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ + R DI++ RG + TRL KL++ + AI+LA AG+ RL Sbjct: 119 LPQGAVVGTSSLRRQCHIRALRPDINIEFLRGNVNTRLAKLDDGQFDAIILASAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E L+IE P+ GQGA+ +E V++ L+ V++ EDT V ERA L Sbjct: 179 MGDRITEQLSIEQSLPAAGQGAVGVECRVDDKDTLALLSVLHDEDTSICVTAERAMNRHL 238 Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ IAGFA +G +Y G+V DG G DA IG A + Sbjct: 239 NGGCQVPIAGFAVLEEGGQVYLQGMVANPDGDEVLRAELRGPVADAEQIGIRVADDLLSQ 298 Query: 300 SNKNVFN 306 + + + Sbjct: 299 GAQAILD 305 >gi|294851125|ref|ZP_06791798.1| porphobilinogen deaminase [Brucella sp. NVSL 07-0026] gi|294819714|gb|EFG36713.1| porphobilinogen deaminase [Brucella sp. NVSL 07-0026] Length = 314 Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 143/305 (46%), Positives = 198/305 (64%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGK Sbjct: 7 KNGTLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGK 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFTEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL Sbjct: 67 GLFTEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDL 126 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL Sbjct: 127 PQGATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGL 186 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 VI ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LD Sbjct: 187 ADVITDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALD 246 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ Sbjct: 247 GSCRTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAG 306 Query: 302 KNVFN 306 + F+ Sbjct: 307 SHFFD 311 >gi|254713697|ref|ZP_05175508.1| porphobilinogen deaminase [Brucella ceti M644/93/1] gi|254715953|ref|ZP_05177764.1| porphobilinogen deaminase [Brucella ceti M13/05/1] gi|261217716|ref|ZP_05931997.1| porphobilinogen deaminase [Brucella ceti M13/05/1] gi|261321437|ref|ZP_05960634.1| porphobilinogen deaminase [Brucella ceti M644/93/1] gi|260922805|gb|EEX89373.1| porphobilinogen deaminase [Brucella ceti M13/05/1] gi|261294127|gb|EEX97623.1| porphobilinogen deaminase [Brucella ceti M644/93/1] Length = 314 Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 143/305 (46%), Positives = 198/305 (64%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGK Sbjct: 7 KNGTLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGK 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFTEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL Sbjct: 67 GLFTEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDL 126 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL Sbjct: 127 PQGATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGL 186 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 VI ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LD Sbjct: 187 ADVITDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALD 246 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ Sbjct: 247 GSCRTPIAGLATVEGDRLSFQGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAG 306 Query: 302 KNVFN 306 + F+ Sbjct: 307 PHFFD 311 >gi|153008310|ref|YP_001369525.1| porphobilinogen deaminase [Ochrobactrum anthropi ATCC 49188] gi|166217778|sp|A6WXJ2|HEM3_OCHA4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|151560198|gb|ABS13696.1| porphobilinogen deaminase [Ochrobactrum anthropi ATCC 49188] Length = 314 Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 150/305 (49%), Positives = 197/305 (64%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +IGTR S LALA A+ETR LM+ H +P I IIP+ST GDRI +R L+EIGGK Sbjct: 7 KNGTLKIGTRGSKLALAQAYETRRRLMEAHGLPEEAIEIIPMSTAGDRIQDRALSEIGGK 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFTEEIE+ L G ID AVHS KDMPT L GL +S +L RED RD FI TA L DL Sbjct: 67 GLFTEEIEQALTDGRIDLAVHSTKDMPTVLPDGLHLSVFLEREDPRDAFIGRTASRLLDL 126 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +G+SSLRR+AL+ R R DI V+ FRG ++TRL KL + LA AG++RL Sbjct: 127 PQGATVGSSSLRRQALIRRLRPDIQVVIFRGNVDTRLRKLEAGEVDGTFLACAGLRRLGL 186 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 VI ++ + E FPP+PGQGAI IET + + + L+ + H +T ++ CERAFLA LD Sbjct: 187 GDVITDLADPESFPPAPGQGAIGIETRIGDTRIDTLLAPLAHRETGIALACERAFLAALD 246 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC++ IAG A G T+ F+G++L DG HE+ G +A IG +AA+++R + Sbjct: 247 GSCRTPIAGLATVNGDTVSFHGMILKPDGSEAHEIKTEGPASNAAAIGTEAAEHLRAKAG 306 Query: 302 KNVFN 306 F Sbjct: 307 PQFFE 311 >gi|262373963|ref|ZP_06067240.1| porphobilinogen deaminase [Acinetobacter junii SH205] gi|262310974|gb|EEY92061.1| porphobilinogen deaminase [Acinetobacter junii SH205] Length = 305 Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 111/303 (36%), Positives = 168/303 (55%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +I TR SPLAL A R+ L +++ P + ++ T+GD+I + L +IGGKG Sbjct: 1 MKTLKIATRQSPLALWQAEHIRARLNELY--PDLTVELVKFVTQGDKILDTPLAKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ +L Sbjct: 59 LFVKELEAALLDGRADLAVHSMKDVPMHLPEGLTLAVICEREDPLDAFVSNQYAHFDELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRRK +L+ R D+ +ID RG + TRL+KL++ AI+LA AG+KRL Sbjct: 119 HGAKVGTSSLRRKCQILQQRPDLEIIDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLA 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ L P+ GQGA+ +E ++ + EL+ + HE T V ERAF A L+G Sbjct: 179 ERIRHCLAPTLSLPAVGQGALGLECRADDQELLELISPLQHEVTSICVRAERAFNAYLEG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+A + L+ G V + DGK + +G + +G A+ + Sbjct: 239 GCQVPIAGYATITQNQLHIEGRVGSVDGKTLLKEQLSGALDEGERLGVVLAEKLLAQGAG 298 Query: 303 NVF 305 + Sbjct: 299 ELL 301 >gi|331005642|ref|ZP_08329011.1| Porphobilinogen deaminase [gamma proteobacterium IMCC1989] gi|330420567|gb|EGG94864.1| Porphobilinogen deaminase [gamma proteobacterium IMCC1989] Length = 324 Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 167/305 (54%), Gaps = 4/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR SPLAL A ++ L +H P + ++P++++GD I + L ++GGKG Sbjct: 13 KNTITIATRKSPLALWQAEYVKARLEALH--PEVTVELLPMTSRGDHILDVPLAKVGGKG 70 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L++GE D AVHS KD+P + +GL +S RED RD F+S S DL Sbjct: 71 LFVKELEHALLNGEADIAVHSMKDVPMEFPEGLGLSVICEREDPRDAFVSEKYASFADLP 130 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+ LL R D+ + RG + TRL KL+ + AI+LA AG+ RLK Sbjct: 131 QGAVVGTSSLRRQCQLLEQRPDLQITFLRGNVNTRLRKLDEGEYDAIILAAAGLMRLKMA 190 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E L E P+ GQGA+ IE ++ + + + +N T + V ERA L+G Sbjct: 191 DRITEYLTPELCLPAGGQGAVGIECRDDDEQVKTWLAPLNDPITHECVAAERAMNRRLEG 250 Query: 243 SCKSAIAGFA--YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C+ IA +A G L+ G+V + DGKI E G A ++G A+ + Sbjct: 251 GCQVPIASYAIHSADGKQLWLRGLVGSPDGKIMLEDEVTGAPDQADDLGVKLAERLLDKG 310 Query: 301 NKNVF 305 + + Sbjct: 311 AETIL 315 >gi|104784255|ref|YP_610753.1| porphobilinogen deaminase [Pseudomonas entomophila L48] gi|123380753|sp|Q1I316|HEM3_PSEE4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|95113242|emb|CAK17970.1| porphobilinogen deaminase [Pseudomonas entomophila L48] Length = 313 Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAH--PGLQVSLVPMVSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T +SL+ Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFKSLEA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLVRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADSEIHALLAPLHHIDTADRVVAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V G R A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRASAEALGVQVAEDLLSQG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AEAIL 303 >gi|183600277|ref|ZP_02961770.1| hypothetical protein PROSTU_03837 [Providencia stuartii ATCC 25827] gi|188020068|gb|EDU58108.1| hypothetical protein PROSTU_03837 [Providencia stuartii ATCC 25827] Length = 314 Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 110/304 (36%), Positives = 163/304 (53%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 RI TR SPLAL A+ + L H P + ++P+ TKGD I + L ++GGK Sbjct: 3 STNIVRIATRKSPLALWQAYFVKEKLEQFH--PGLQVELVPMVTKGDIILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL L Sbjct: 61 GLFVKELELALLEKRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQYDSLDAL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SV+GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL Sbjct: 121 PAGSVVGTSSLRRQCQLRELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I+ L E P+ GQGA+ IE +++ + ++L++ +N ++T V ERA L+ Sbjct: 181 EARIRTALAPEQSLPAVGQGAVGIECRLDDERTRQLLEKLNDDNTSVCVLAERAMNMRLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I +A + ++ +V A DG R A G A+ + Sbjct: 241 GGCQVPIGSYAIWQDGQIWLRALVGAPDGSQVIRGERLTTPEQATQAGISLAEELLDKGA 300 Query: 302 KNVF 305 + + Sbjct: 301 REIL 304 >gi|118581775|ref|YP_903025.1| porphobilinogen deaminase [Pelobacter propionicus DSM 2379] gi|158512569|sp|A1AUE7|HEM3_PELPD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|118504485|gb|ABL00968.1| porphobilinogen deaminase [Pelobacter propionicus DSM 2379] Length = 310 Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 167/306 (54%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RIGTR S LAL A +S L + P + + + T GDRI + L ++GG Sbjct: 1 MPPRQLRIGTRASQLALWQANWVKSELEKRY--PAMEVTLTKIKTMGDRILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD +S A+ Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVVSRAARFSH- 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTS+LRR+A LL R D+ ++ RG +ETR+ KL+ A++LA AG+KRL Sbjct: 118 LPPGARVGTSALRRQAQLLHARPDLEMVTIRGNVETRIRKLDEENLDAVILAAAGLKRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + E L++E P+ GQGA+ IE +++P E + NH DT +V ERA L Sbjct: 178 LTQRVAEYLDVEFSIPAIGQGALGIECRLSDPVVTEAIAFFNHPDTSHAVRAERALLRRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IA +G L G++ A DG+ F +G ++G + A + Sbjct: 238 QGGCQVPIAAHGTIRGGELRLVGLIAAVDGREFVRDEISGPVDQCEHLGEELADRLLSRG 297 Query: 301 NKNVFN 306 + + Sbjct: 298 GRAILE 303 >gi|290477117|ref|YP_003470030.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Xenorhabdus bovienii SS-2004] gi|289176463|emb|CBJ83272.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Xenorhabdus bovienii SS-2004] Length = 311 Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 112/303 (36%), Positives = 165/303 (54%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR SPLA+ A + L H P + +IP+ T+GD I + L ++GGKG Sbjct: 1 MKIIRIATRQSPLAMWQAQYVQKQLEQFH--PELKVELIPMVTRGDVILDTPLAKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ D AVHS KD+P + GL + R D RD F+S SL +L Sbjct: 59 LFVKELELALLENRADIAVHSMKDVPVEFPDGLGLVTICERGDPRDAFVSVKYTSLDELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + S++GTSSLRR+ L + R D+ V D RG + TRL KL+N AI+LA AG+KRL E Sbjct: 119 IGSIVGTSSLRRQCQLRQLRPDLVVRDLRGNVGTRLGKLDNGDYDAIILAAAGLKRLGLE 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I+ L E P+ GQGA+ IE +++ + +EL+ +NH T V ERA L+G Sbjct: 179 DRIRMPLEPELLLPAVGQGAVGIECRLDDKQTRELLAPLNHTGTEICVLAERAMNTHLEG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I +A +G+ ++ +V A DG I + + +A G + A+ + + Sbjct: 239 GCQVPIGSYAIWQGNNIWLRALVGAPDGSITVRGEKTVSPEEARRAGVELAEELLEKGAR 298 Query: 303 NVF 305 + Sbjct: 299 QIL 301 >gi|254502424|ref|ZP_05114575.1| porphobilinogen deaminase [Labrenzia alexandrii DFL-11] gi|222438495|gb|EEE45174.1| porphobilinogen deaminase [Labrenzia alexandrii DFL-11] Length = 308 Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 142/305 (46%), Positives = 199/305 (65%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ P RIGTR S LALA A ETR+ LM H +P I+ + T GD+I +R L+E+GG Sbjct: 1 MQSNPLRIGTRGSALALAQAHETRARLMAAHDLPEDAFEIVVIKTSGDQIQDRPLSEVGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ ++ G ID AVHS+KDMPT L GL ++A+LPRED+RD F+S A++L D Sbjct: 61 KGLFTKEIEEAMLDGRIDLAVHSSKDMPTVLPDGLALTAFLPREDVRDAFLSPKAKTLMD 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+G+SSLRR+A++ R R DI V+ +RG ++TRL KL + A LLAYAG++RL Sbjct: 121 LPHGAVVGSSSLRRQAMIKRLRPDIEVVMYRGNLQTRLRKLAEGEVDATLLAYAGLRRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ + +L EDF P+ GQGAICIE+ + + E+++ I+ +T ++ ERAFLA L Sbjct: 181 LEEEVTSLLETEDFLPAVGQGAICIESREGDERTLEMLQAIHDRETQIRLDAERAFLAVL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ I G A G L G VL DG H+ R+G DA+ IG+ A + ++ Sbjct: 241 DGSCRTPIGGLALLNGDELTLKGTVLKPDGSEVHDEVRSGGAVDAVQIGQAAGEALKAKM 300 Query: 301 NKNVF 305 Sbjct: 301 GPGFL 305 >gi|239502040|ref|ZP_04661350.1| porphobilinogen deaminase [Acinetobacter baumannii AB900] Length = 309 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 109/303 (35%), Positives = 170/303 (56%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKG Sbjct: 5 MKTLKIATRQSPLALWQAEHIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKG 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 63 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLP 122 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL Sbjct: 123 QGAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLA 182 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G Sbjct: 183 ERIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEG 242 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+A + +Y G V + DG+ +A +G + A+ + Sbjct: 243 GCQVPIAGYATLQDGKIYIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAG 302 Query: 303 NVF 305 ++ Sbjct: 303 DLL 305 >gi|219871198|ref|YP_002475573.1| porphobilinogen deaminase [Haemophilus parasuis SH0165] gi|219691402|gb|ACL32625.1| porphobilinogen deaminase [Haemophilus parasuis SH0165] Length = 309 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 108/304 (35%), Positives = 166/304 (54%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ RI TR SPLAL A + +L + P ++ ++ + TKGD I + L +IGGK Sbjct: 1 MKEILRIATRQSPLALWQANFVKDALEQ--RFPQLSVELVTMVTKGDIILDTPLAKIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ +L+ L Sbjct: 59 GLFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNHYANLEAL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSSLRR+ L+ + + RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 119 PAGAVVGTSSLRRQCQLMAKYPHLQIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I+ + +E P+ GQGA+ IET +N+ + + +NH+ T V ERA + L Sbjct: 179 SERIRTFIPVETSLPACGQGAVGIETRLNDERVLAYLAELNHQPTAYCVQAERAMNSRLQ 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I GFA G + +V + DG S GN +A +G + A+ + Sbjct: 239 GGCQVPIGGFATLTGDEIELNALVGSLDGSTIVRASAKGNIKEAEKLGVEVAEALLAKGA 298 Query: 302 KNVF 305 ++ Sbjct: 299 DHIL 302 >gi|239995985|ref|ZP_04716509.1| porphobilinogen deaminase [Alteromonas macleodii ATCC 27126] Length = 312 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 109/304 (35%), Positives = 168/304 (55%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RI TR S LAL A ++ L++ + P + ++P+ST+GD+I + L +IGGK Sbjct: 6 TTRTVRIATRKSALALWQAEYVKAKLLEHY--PSMTVELVPMSTQGDKILDTPLAKIGGK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P + +G + A RE+ D F+S+ SL L Sbjct: 64 GLFIKELEIAMLEGRADIAVHSMKDVPVEFPEGFGLHAICERENPFDAFVSNNHDSLDAL 123 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSSLRR+ + ++R D+ + D RG + TRL KL+ + AI+LA AG+ RL+ Sbjct: 124 PQGAVVGTSSLRRQCQIRKYRPDLIIKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLEM 183 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I+ L + P+ GQGA+ IE ++ + +L++ +NH DT V ERA L+ Sbjct: 184 ESRIRMPLPADISLPAVGQGAVGIECRNDDEELIKLLQALNHTDTNTRVTAERAMNERLE 243 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I FA G L G+V DG S +R A +IG + A+ + Sbjct: 244 GGCQVPIGSFATLDGDVLTLTGMVGKPDGSELLFASATASREKAADIGVEVAESLLEQGA 303 Query: 302 KNVF 305 + Sbjct: 304 GEIL 307 >gi|90406695|ref|ZP_01214888.1| porphobilinogen deaminase [Psychromonas sp. CNPT3] gi|90312148|gb|EAS40240.1| porphobilinogen deaminase [Psychromonas sp. CNPT3] Length = 311 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A +S L+ H P + ++ + TKGD+I + L ++GG Sbjct: 1 MSNKIIRIATRHSPLAMWQANFVKSELLKWH--PELQVELLAMKTKGDKILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL ++ RED RD F+S+ ++ Sbjct: 59 KGLFVKELEVAILEGRADIAVHSMKDVPVDFPEGLGLAVICEREDPRDAFVSNHFANIAA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R DI V D RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPQGSVVGTSSLRRQCQLRAQRPDIKVKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLD 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++E+ P+ GQGA+ IE +++ + L+K + H T V ERA L Sbjct: 179 MHDRIASYMSVEESLPAVGQGAVGIECRLDDMQTLALLKPLEHRITRLRVTAERAMNLAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I + K TL+ G+V + DG G DA +G + AQ + Sbjct: 239 QGGCQVPIGSYCILKEDTLWLRGLVGSVDGTHIIRKEIRGKVADAEQMGLNLAQQLLESG 298 Query: 301 NKNVF 305 + Sbjct: 299 ADKIL 303 >gi|169797472|ref|YP_001715265.1| porphobilinogen deaminase [Acinetobacter baumannii AYE] gi|213155714|ref|YP_002317759.1| porphobilinogen deaminase [Acinetobacter baumannii AB0057] gi|169150399|emb|CAM88296.1| porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Acinetobacter baumannii AYE] gi|213054874|gb|ACJ39776.1| porphobilinogen deaminase [Acinetobacter baumannii AB0057] Length = 314 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 169/303 (55%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +I TR SPLAL A R+ L + H P + ++ T+GD+I + L +IGGKG Sbjct: 10 MKTLKIATRQSPLALWQAEHIRARLQERH--PDLTVELVKFVTQGDKILDTPLAKIGGKG 67 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 68 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLP 127 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL Sbjct: 128 QGAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLA 187 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G Sbjct: 188 ERIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEG 247 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+A + ++ G V + DG+ +A +G + A+ + Sbjct: 248 GCQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAG 307 Query: 303 NVF 305 ++ Sbjct: 308 DLL 310 >gi|167855158|ref|ZP_02477929.1| porphobilinogen deaminase [Haemophilus parasuis 29755] gi|167853703|gb|EDS24946.1| porphobilinogen deaminase [Haemophilus parasuis 29755] Length = 309 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 108/304 (35%), Positives = 166/304 (54%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ RI TR SPLAL A + +L + P ++ ++ + TKGD I + L +IGGK Sbjct: 1 MKEILRIATRQSPLALWQANFVKDALEQ--RFPQLSVELVTMVTKGDIILDTPLAKIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ +L+ L Sbjct: 59 GLFVKELELALLKNRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNHYANLEAL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSSLRR+ L+ + + RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 119 PAGAVVGTSSLRRQCQLMAKYPHLQIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I+ + +E P+ GQGA+ IET +N+ + + +NH+ T V ERA + L Sbjct: 179 SERIRTFIPVETSLPACGQGAVGIETRLNDERVLAYLAELNHQPTAYCVQAERAMNSRLQ 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I GFA G + +V + DG S GN +A +G + A+ + Sbjct: 239 GGCQVPIGGFATLTGDEIELNALVGSLDGSTIVRASAKGNIKEAEKLGVEVAEALLAKGA 298 Query: 302 KNVF 305 ++ Sbjct: 299 DHIL 302 >gi|261345249|ref|ZP_05972893.1| hydroxymethylbilane synthase [Providencia rustigianii DSM 4541] gi|282566947|gb|EFB72482.1| hydroxymethylbilane synthase [Providencia rustigianii DSM 4541] Length = 314 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 109/304 (35%), Positives = 170/304 (55%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 RI TR SPLAL A+ ++ L +H P + ++P+ TKGD I + L ++GGK Sbjct: 3 STNIVRIATRKSPLALWQAYFVKAKLEQLH--PNLQVELVPMVTKGDIILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L+ G D AVHS KD+P + +GL + RED RD F+S+ ++ +L Sbjct: 61 GLFVKELELALLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYANIDEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 S++GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL+ Sbjct: 121 PAGSIVGTSSLRRQCQLKELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLEL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 ++ IK L E P+ GQGA+ IE +++ + ++L+ +NH++T V ERA L+ Sbjct: 181 DERIKTALEPELSLPAVGQGAVGIECRLDDQRTRDLLAKLNHDETSICVLAERAMNMRLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I +A + + ++ +V A DG R A G A+ + Sbjct: 241 GGCQVPIGSYAIWQDNKIWLRALVGAPDGSTVIRGERLVEPEHATQAGIALAEELLDKGA 300 Query: 302 KNVF 305 + + Sbjct: 301 REIL 304 >gi|215484908|ref|YP_002327147.1| porphobilinogen deaminase [Acinetobacter baumannii AB307-0294] gi|301346814|ref|ZP_07227555.1| porphobilinogen deaminase [Acinetobacter baumannii AB056] gi|301512648|ref|ZP_07237885.1| porphobilinogen deaminase [Acinetobacter baumannii AB058] gi|301595532|ref|ZP_07240540.1| porphobilinogen deaminase [Acinetobacter baumannii AB059] gi|332851472|ref|ZP_08433469.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6013150] gi|332866846|ref|ZP_08437233.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6013113] gi|213987600|gb|ACJ57899.1| porphobilinogen deaminase [Acinetobacter baumannii AB307-0294] gi|332729925|gb|EGJ61256.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6013150] gi|332734374|gb|EGJ65495.1| hydroxymethylbilane synthase [Acinetobacter baumannii 6013113] Length = 309 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 169/303 (55%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +I TR SPLAL A R+ L + H P + ++ T+GD+I + L +IGGKG Sbjct: 5 MKTLKIATRQSPLALWQAEHIRARLQERH--PDLTVELVKFVTQGDKILDTPLAKIGGKG 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 63 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLP 122 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL Sbjct: 123 QGAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLA 182 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G Sbjct: 183 ERIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEG 242 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+A + ++ G V + DG+ +A +G + A+ + Sbjct: 243 GCQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAG 302 Query: 303 NVF 305 ++ Sbjct: 303 DLL 305 >gi|307250258|ref|ZP_07532212.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857699|gb|EFM89801.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 314 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 109/304 (35%), Positives = 164/304 (53%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K RI TR SPLAL A + L + P ++ ++ + TKGD I + +L +IGGK Sbjct: 6 MKDTLRIATRQSPLALWQANFVKDELEK--RFPELSVELVTMVTKGDVILDTSLAKIGGK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L Sbjct: 64 GLFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDEL 123 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 124 PAGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGM 183 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I+ +++E P+ GQGA+ IET V++ + + +NH T V ERA L Sbjct: 184 PERIRSFISVEQSLPAAGQGAVGIETRVDDERVLNYLATLNHNPTACCVIAERAMNTRLQ 243 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I GF+ G+ + +V A DG S +R +A +G A+ + Sbjct: 244 GGCQVPIGGFSTLNGNEITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQLLAQGA 303 Query: 302 KNVF 305 + Sbjct: 304 DKIL 307 >gi|150398163|ref|YP_001328630.1| porphobilinogen deaminase [Sinorhizobium medicae WSM419] gi|150029678|gb|ABR61795.1| porphobilinogen deaminase [Sinorhizobium medicae WSM419] Length = 330 Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats. Identities = 152/305 (49%), Positives = 208/305 (68%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA ETR L H +P I+ LSTKGDRIT+R+L EIGG Sbjct: 22 MQTKPFRIGTRGSPLALAQTHETRDRLAAAHGLPVEMFEIVTLSTKGDRITDRSLAEIGG 81 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E++L+SG++D AVHS+KDM TKL GL +SA+LPRED+RD F+ +A L + Sbjct: 82 KGLFTEELEQQLLSGDLDFAVHSSKDMTTKLPDGLFLSAFLPREDVRDAFVGRSATRLAE 141 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R D++VI +RG++ETRL KL + LLAYAG++RL Sbjct: 142 LPQGATVGSSSLRRQALIRRLRPDVNVITYRGQVETRLRKLAEGQVDGTLLAYAGLRRLG 201 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V E+L+ E FPP+P QGAICIE + + + L+ ++ T ++V+CER FLA L Sbjct: 202 MAHVPTELLDPESFPPAPAQGAICIEARLGDDRINALLSAVDDPRTHEAVSCERGFLATL 261 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG+A G+ + F G++L DG H + +G DA +GR+A + IR + Sbjct: 262 DGSCRTPIAGYAQSDGARIRFSGMILTPDGTTCHRIETDGRTADAAALGREAGERIRAKA 321 Query: 301 NKNVF 305 F Sbjct: 322 GPEFF 326 >gi|114321817|ref|YP_743500.1| hydroxymethylbilane synthase [Alkalilimnicola ehrlichii MLHE-1] gi|122310751|sp|Q0A577|HEM3_ALHEH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|114228211|gb|ABI58010.1| hydroxymethylbilane synthase [Alkalilimnicola ehrlichii MLHE-1] Length = 308 Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 160/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLA+ A + L H P + ++P+ T+GDRI ++ L+ IGG Sbjct: 1 MPQDKLRIATRRSPLAMWQAEHVAAELRRHH--PGLEVELVPMVTRGDRILDQALSRIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ + G D AVHS KD+P ++ G + L R + D F+S+ + L D Sbjct: 59 KGLFIKELEQGMEEGRADLAVHSMKDVPWRMPDGFALPVILERHEPTDAFVSNHYRRLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +GT+SLRR+ R D+ V RG + TRL KL+ + AI+LA +G+ RL Sbjct: 119 LPEGGHLGTASLRRQCQAKARRPDLRVSTLRGNVNTRLAKLDAGEFDAIILAASGLSRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I L E+ P+ GQGA+ IE + + QELV ++H T + ERA A L Sbjct: 179 FDERIARRLPPEESLPAVGQGALGIECLAEDRRVQELVAPLDHGPTHTLLKAERAMNARL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ IAG+A +G ++ G+V + DG+ G A +G + Sbjct: 239 QGSCQVPIAGYACYQGEEIWLRGLVGSPDGQEIVRGEVRGPIAQAAELGDRLGGELLERG 298 Query: 301 NKNVF 305 + Sbjct: 299 AARIL 303 >gi|225850000|ref|YP_002730234.1| porphobilinogen deaminase [Persephonella marina EX-H1] gi|225645034|gb|ACO03220.1| porphobilinogen deaminase [Persephonella marina EX-H1] Length = 308 Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 115/301 (38%), Positives = 169/301 (56%), Gaps = 2/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A L P + ++ + TKGD+I + L ++GGKGLF Sbjct: 3 IRIGTRKSKLALWQANYIADQLKK--HFPDLEVELVKIVTKGDKILDVPLAKVGGKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ ++ EID AVHS KD+PT +GL + A RED RD F+S S++D+ + Sbjct: 61 KEIEEAMLRNEIDIAVHSLKDVPTYFPEGLGLVAITEREDPRDAFLSVKYNSIEDMPEGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRRKA ++ R DI + D RG ++TR+ KL + I+LAYAG+KRL E + Sbjct: 121 VLGTSSLRRKAQIMMKRKDIRIEDLRGNVDTRIRKLEEGQYDGIILAYAGLKRLGLEGKV 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++IL + P+ QG + IE +++ K +E+V V+NH ++ ERAFL L+G C+ Sbjct: 181 RQILQPDYMIPAVAQGFLGIEARLDDEKTREIVSVLNHRESEIRAKAERAFLKTLEGGCQ 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +AG++ L G V G S G+ DA ++G A+ + K V Sbjct: 241 VPLAGYSEIVNGKLKITGFVSDLTGDRVFRDSMEGSLEDAESLGVKLAEKLLSDGAKEVL 300 Query: 306 N 306 Sbjct: 301 E 301 >gi|237801592|ref|ZP_04590053.1| porphobilinogen deaminase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024452|gb|EGI04508.1| porphobilinogen deaminase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 313 Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A +S L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSTREIRIATRQSALALWQAEYVKSRLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLEDRADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFDSLQA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I +++ED P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FEDRITSAISVEDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G + + A +G + A+ + Sbjct: 239 NGGCQVPIACYAILEGDDVWLRGLVGDPSGSVLLHAEARAPQTSAQALGVEVAEALLAQG 298 Query: 301 NKNVF 305 + Sbjct: 299 AAKIL 303 >gi|226946767|ref|YP_002801840.1| porphobilinogen deaminase [Azotobacter vinelandii DJ] gi|226721694|gb|ACO80865.1| porphobilinogen deaminase [Azotobacter vinelandii DJ] Length = 314 Score = 275 bits (702), Expect = 7e-72, Method: Composition-based stats. Identities = 108/302 (35%), Positives = 163/302 (53%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGGKGL Sbjct: 5 REIRIATRKSALALWQAEYVKARLEQAH--PGLAVSLVPMVSRGDKLLDAPLAKIGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ D AVHS KD+P + +GL + RED RD F+S+ SL +L Sbjct: 63 FVKELETALLENAADIAVHSMKDVPMEFPEGLGLYCICEREDPRDAFVSNAFASLDELPA 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S+IGTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL E Sbjct: 123 GSLIGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEG 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ + I D P+ GQGA+ IE + + Q L+ ++H T V ERA L+G Sbjct: 183 RIRSRIAIADSLPAGGQGAVGIECRSADREIQALLAPLDHAPTALRVGAERALNKRLNGG 242 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IA +A + L+ G+V DG++ +A +G A+ + + Sbjct: 243 CQVPIACYAELEDGQLWLRGLVGQPDGRLLLRAEARAPADEAEALGVRVAEALLAQGAQR 302 Query: 304 VF 305 + Sbjct: 303 IL 304 >gi|304414148|ref|ZP_07395516.1| porphobilinogen deaminase [Candidatus Regiella insecticola LSR1] gi|304283362|gb|EFL91758.1| porphobilinogen deaminase [Candidatus Regiella insecticola LSR1] Length = 312 Score = 275 bits (702), Expect = 7e-72, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 159/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K RI TR SPLAL A R SL H P + ++P++T+GD + + L +IGG Sbjct: 1 MSEKVIRIATRQSPLALWQADYVRKSLESHH--PDLQVKLVPITTRGDTLLHTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ D AVHS KD+P GL + R D D F+S + LK Sbjct: 59 KGLFVKELEQALLENCADIAVHSIKDVPIHFPAGLGLVVICQRGDPHDAFVSKNYKHLKQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ + + + V D RG + TRLNKL+ AI+LA AG++RL Sbjct: 119 LPPGSIVGTSSLRRQCQIRKKYPHLIVRDLRGNVGTRLNKLDQGAYQAIILAVAGLQRLD 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ +++ E+ P+ GQGAI IE + + ++L+ +NH T + ERA L Sbjct: 179 LQSRIQHVMSPEESLPAAGQGAIGIECRLEDDVTRQLLAPLNHFPTERRICAERALNIRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A +G L V DG R G A IG D A + Sbjct: 239 EGGCQVPIGSYAELEGDNLRLRAFVSTPDGSQMIYGERCGLAIQAEKIGLDLATELIAEG 298 Query: 301 NKNVF 305 + Sbjct: 299 ADKIL 303 >gi|66043333|ref|YP_233174.1| porphobilinogen deaminase [Pseudomonas syringae pv. syringae B728a] gi|289677629|ref|ZP_06498519.1| porphobilinogen deaminase [Pseudomonas syringae pv. syringae FF5] gi|302187597|ref|ZP_07264270.1| porphobilinogen deaminase [Pseudomonas syringae pv. syringae 642] gi|75504025|sp|Q500N6|HEM3_PSEU2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|63254040|gb|AAY35136.1| Porphobilinogen deaminase [Pseudomonas syringae pv. syringae B728a] gi|330901069|gb|EGH32488.1| porphobilinogen deaminase [Pseudomonas syringae pv. japonica str. M301072PT] gi|330952274|gb|EGH52534.1| porphobilinogen deaminase [Pseudomonas syringae Cit 7] gi|330970393|gb|EGH70459.1| porphobilinogen deaminase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 313 Score = 275 bits (702), Expect = 7e-72, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G + + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGSVLLHADARAPQTSAQALGVQVAEALLEQG 298 Query: 301 NKNVF 305 ++ Sbjct: 299 AADIL 303 >gi|222054398|ref|YP_002536760.1| porphobilinogen deaminase [Geobacter sp. FRC-32] gi|254800252|sp|B9M416|HEM3_GEOSF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|221563687|gb|ACM19659.1| porphobilinogen deaminase [Geobacter sp. FRC-32] Length = 318 Score = 275 bits (702), Expect = 7e-72, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 167/305 (54%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A +S L + P + ++ + T GD+I + L ++GG Sbjct: 1 MALKQLRIGTRASQLALWQANWVKSELEQRY--PGMEVSLVKIKTIGDKILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ G+ID AVHS KD+PT+ +GL + RED RD IS + D Sbjct: 59 KGLFVKEIEEAMLRGDIDIAVHSMKDVPTEFPEGLGLHCITEREDPRDAVISRGTKFA-D 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A LL+ R D+ ++ RG +ETR+NKL K A++LA AG+KRL Sbjct: 118 LPQGAKIGTSALRRQAQLLKVRPDMEMVIIRGNVETRINKLETEKLDAVILAAAGLKRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + E L + P+ GQGA+ IE ++N + ++ + NH T +V ERA L Sbjct: 178 FTEKVAEYLPTDLSIPAIGQGALGIECRLDNEEVKQTIDFFNHPATAYAVRAERALLWRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA F GS L G + + DGK + G D +G A+ + Sbjct: 238 EGGCQVPIAAFGEVTGSDLKLVGFIASVDGKTSVRGTITGPAADCEKLGIKLAEQLLADG 297 Query: 301 NKNVF 305 + Sbjct: 298 GHAIL 302 >gi|52424331|ref|YP_087468.1| porphobilinogen deaminase [Mannheimia succiniciproducens MBEL55E] gi|61213369|sp|Q65VX7|HEM3_MANSM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|52306383|gb|AAU36883.1| HemC protein [Mannheimia succiniciproducens MBEL55E] Length = 310 Score = 275 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 109/306 (35%), Positives = 163/306 (53%), Gaps = 3/306 (0%) Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M K +I TR SPLAL A + L ++ P + ++ + TKGD I + L +IG Sbjct: 1 MNNKNHLKIATRQSPLALWQANYVKDRLTALY--PDLQVELVTMVTKGDVILDTPLAKIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E L++ E D AVHS KD+P + +GL +S RED RD F+S+ +SL Sbjct: 59 GKGLFVKELEHALLNHEADIAVHSMKDVPMEFPQGLGLSVICKREDPRDAFVSNKYRSLA 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +++GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+ RL Sbjct: 119 ELPQGAIVGTSSLRRQCQLKSLRPDLDIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I + + P+ GQGA+ IE V++ Q L+ + H++T V ERA Sbjct: 179 GMAERIASFIETDISLPAAGQGAVGIECRVDDELVQSLLAPLAHQETTICVLAERAMNNR 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L G C+ I GFA K ++ +V A+DG +A +G A+ + Sbjct: 239 LQGGCQVPIGGFAQVKNGEVFLRALVGATDGSQIIRAEGKSAVENAEVLGVQIAEDLLQQ 298 Query: 300 SNKNVF 305 + Sbjct: 299 GADKIL 304 >gi|322514003|ref|ZP_08067077.1| hydroxymethylbilane synthase [Actinobacillus ureae ATCC 25976] gi|322120153|gb|EFX92114.1| hydroxymethylbilane synthase [Actinobacillus ureae ATCC 25976] Length = 309 Score = 275 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 111/304 (36%), Positives = 160/304 (52%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K RI TR SPLAL A + L + P + ++ + TKGD I + L +IGGK Sbjct: 1 MKDILRIATRQSPLALWQANFVKKELEK--RFPELQVELVTMVTKGDIILDTPLAKIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ Q+L +L Sbjct: 59 GLFVKELELALLEKRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNKYQNLDEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSSLRR+ L+ + V RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 119 PAGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDNGEYEAIILASAGLIRLGM 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I+ + +E P+ GQGA+ IET VN+ + + +NH T V ERA L Sbjct: 179 PERIRSFIAVEQSLPAAGQGAVGIETRVNDERVLNYLASLNHNPTACCVMAERAMNTRLQ 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I GFA G+ + +V A DG S + DA +G A+ + Sbjct: 239 GGCQVPIGGFATLNGNEITLNALVGALDGSTIIRASGVADIEDAEQLGISVAEQLLAQGA 298 Query: 302 KNVF 305 + Sbjct: 299 DKIL 302 >gi|330976469|gb|EGH76521.1| porphobilinogen deaminase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 313 Score = 275 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLIVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G + + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGSVLLHADARAPQTSAQALGVQVAEALLEQG 298 Query: 301 NKNVF 305 ++ Sbjct: 299 AADIL 303 >gi|262280694|ref|ZP_06058477.1| porphobilinogen deaminase [Acinetobacter calcoaceticus RUH2202] gi|262257594|gb|EEY76329.1| porphobilinogen deaminase [Acinetobacter calcoaceticus RUH2202] Length = 314 Score = 275 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 111/303 (36%), Positives = 171/303 (56%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +I TR SPLAL A R+ L ++H P + ++ T+GD+I + L +IGGKG Sbjct: 10 MKTLKIATRQSPLALWQAEYIRARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKG 67 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 68 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLP 127 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRRK+ +L+ R D+ VID RG + TRL KL++ + AI+LA AG+KRL Sbjct: 128 QGAKVGTSSLRRKSQILKQRPDLQVIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLS 187 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ L + P+ GQGA+ +E + + L++ + HE+T V ERAF A L+G Sbjct: 188 ERIRHCLTPDISLPAVGQGALGLECRAADNEVLSLIQPLLHEETDVCVRAERAFNAYLEG 247 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+A + ++ G V ++DG+ +A +G + A+ + Sbjct: 248 GCQVPIAGYATLQNGQIHIEGRVGSADGQTLLRAELTDEASNAHQLGENLARNLLDQGAG 307 Query: 303 NVF 305 + Sbjct: 308 ELL 310 >gi|212710180|ref|ZP_03318308.1| hypothetical protein PROVALCAL_01234 [Providencia alcalifaciens DSM 30120] gi|212687179|gb|EEB46707.1| hypothetical protein PROVALCAL_01234 [Providencia alcalifaciens DSM 30120] Length = 314 Score = 275 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 112/304 (36%), Positives = 169/304 (55%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 RI TR SPLAL A+ ++ L +H + ++P+ TKGD I + L ++GGK Sbjct: 3 STNIVRIATRKSPLALWQAYFVKAKLEQLHS--GLQVELVPMVTKGDIILDTPLAKVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L+ G D AVHS KD+P + +GL + RED RD F+S+ ++ L Sbjct: 61 GLFVKELELALLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYANIDAL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 S++GTSSLRR+ L R D+ + D RG + TRL+KL+N + AI+LA AG+KRL+ Sbjct: 121 PAGSIVGTSSLRRQCQLRELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLEL 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 ++ IK L E P+ GQGA+ IE +N+ + ++L+ +NH+ T V ERA L+ Sbjct: 181 DERIKTALEPEQSLPAVGQGAVGIECRLNDQRTRDLLAKLNHDATSICVLAERAMNMRLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I +A +G ++ +V A DG R DAI G A+ + Sbjct: 241 GGCQVPIGSYAIWQGDKIWLRALVGAPDGSQVIRGERLIAPVDAIQAGISLAEELLNKGA 300 Query: 302 KNVF 305 + + Sbjct: 301 REIL 304 >gi|148559606|ref|YP_001259712.1| porphobilinogen deaminase [Brucella ovis ATCC 25840] gi|166201494|sp|A5VSL5|HEM3_BRUO2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|148370863|gb|ABQ60842.1| porphobilinogen deaminase [Brucella ovis ATCC 25840] Length = 304 Score = 274 bits (701), Expect = 9e-72, Method: Composition-based stats. Identities = 143/301 (47%), Positives = 197/301 (65%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGKGLFT Sbjct: 1 MKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL + Sbjct: 61 EEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL VI Sbjct: 121 TVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LDGSC+ Sbjct: 181 TDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSCR 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ + F Sbjct: 241 TPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAGPHFF 300 Query: 306 N 306 + Sbjct: 301 D 301 >gi|15889908|ref|NP_355589.1| porphobilinogen deaminase [Agrobacterium tumefaciens str. C58] gi|23821691|sp|Q8UC46|HEM3_AGRT5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|15157859|gb|AAK88374.1| porphobilinogen deaminase [Agrobacterium tumefaciens str. C58] Length = 309 Score = 274 bits (701), Expect = 9e-72, Method: Composition-based stats. Identities = 167/306 (54%), Positives = 225/306 (73%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A+ETRS LM H +P I+ LSTKGDRIT+R L+EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAYETRSRLMAAHGLPEEMFEIVVLSTKGDRITDRALSEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E +L+SGE+D AVHS+KDMPT L +GL +SA+LPRED+RD FI TA L + Sbjct: 61 KGLFTEELENQLLSGELDIAVHSSKDMPTVLPEGLHLSAFLPREDMRDAFIGRTAPKLLE 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+G++SLRR+AL+ R R D++VI FRG ++TRL KL +A A LLA+AG+KRL Sbjct: 121 LPQGAVVGSASLRRQALIRRLRPDLNVIVFRGLVDTRLRKLEEGQADATLLAFAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K+ V EIL+ ++FPP+P QGAI +E+ + + + +L+ IN T+D+V CERAFLA L Sbjct: 181 KDNVPTEILDPKEFPPAPAQGAIGVESRIGDARMDKLLAPINDRPTYDAVTCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG+A C+G L+F G++L DG+ H V +GNR DA+ +G+ A + +R + Sbjct: 241 DGSCRTPIAGYATCEGDNLHFSGLILTPDGQTSHGVEISGNRRDALILGKKAGEEVRAKA 300 Query: 301 NKNVFN 306 N F Sbjct: 301 GSNFFE 306 >gi|89093768|ref|ZP_01166714.1| porphobilinogen deaminase [Oceanospirillum sp. MED92] gi|89081898|gb|EAR61124.1| porphobilinogen deaminase [Oceanospirillum sp. MED92] Length = 313 Score = 274 bits (701), Expect = 9e-72, Method: Composition-based stats. Identities = 109/308 (35%), Positives = 177/308 (57%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLAL A ++ L H P N+ ++ +++KGD+I + L ++GG Sbjct: 1 MS-RTIRIATRKSPLALWQAEYVKAELERHH--PGINVELLGMTSKGDKILDAPLAKVGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ +++GE D AVHS KD+P + +GL ++ PRE D F+S+T S+++ Sbjct: 58 KGLFVKELEEAMLAGEADIAVHSMKDVPMEFPEGLGLAVICPREQPTDAFVSNTYNSIEE 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A + R D+ + RG + TRL KL++ + AI+LA AG+ RL+ Sbjct: 118 LPEGAVVGTSSLRREAQIREKRPDLQIKWLRGNVNTRLRKLDDGEYDAIILASAGLIRLE 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ +++E P+ GQGA+ IE ++ + EL+K ++ ++T V+ ERA L Sbjct: 178 MPERIRSEISVEFSLPAGGQGAVGIECRTDDHELLELLKPLHDQETAWRVSAERAMNRRL 237 Query: 241 DGSCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +G C+ IA +A LY G+V DG + G A +G A + Sbjct: 238 EGGCQVPIACYATLNDDNSELYLRGLVAKPDGTLILRDEERGTPEQAEQLGITLADRLLA 297 Query: 299 ISNKNVFN 306 K++ + Sbjct: 298 AGAKSILD 305 >gi|121997816|ref|YP_001002603.1| porphobilinogen deaminase [Halorhodospira halophila SL1] gi|229836112|sp|A1WVT9|HEM3_HALHL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|121589221|gb|ABM61801.1| hydroxymethylbilane synthase [Halorhodospira halophila SL1] Length = 310 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LA+ A + L +H P + ++P+ST+GD I ++ L IGG Sbjct: 1 MAAESLRIATRRSQLAMWQAEHIAAELQRLH--PGLEVELVPMSTRGDEILDQPLARIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ GE D AVHS KD+P +L +G ++A R D RD F+S+ L + Sbjct: 59 KGLFMKELEDGMLRGEADLAVHSMKDIPWRLPEGFDLAAVSDRADPRDAFVSNHYSDLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRR+ ++ R D+ + RG ++TRL KL++ AI+LA +G+ RL+ Sbjct: 119 LPHGARVGTASLRRQCQIMDRRPDLQIEVLRGNVQTRLRKLDDGVYDAIILAASGLDRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I L E P+ GQGA+ IE + + +LV+ +NHE T +N ER A L Sbjct: 179 LTHRIAGRLTPEQSLPAVGQGALGIECREGDERVMKLVEGLNHEATRIRINAERGMNARL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +GSC+ I G+A G ++ G+V A DG G +A N+GR + Sbjct: 239 EGSCQVPIGGYAELDGDEVHLRGLVGAIDGSEVIRGEIRGPAAEAENLGRQLGDDLLARG 298 Query: 301 NKNVF 305 + Sbjct: 299 ADRIL 303 >gi|257465324|ref|ZP_05629695.1| porphobilinogen deaminase [Actinobacillus minor 202] gi|257450984|gb|EEV25027.1| porphobilinogen deaminase [Actinobacillus minor 202] Length = 308 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 109/304 (35%), Positives = 159/304 (52%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K RI TR SPLAL A ++ L P I ++ + TKGD I + L +IGGK Sbjct: 1 MKDILRIATRQSPLALWQANFVKAELEK--HFPELQIELVTMVTKGDIILDTPLAKIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L+ D AVHS KD+P +GL ++ RED RD F+S+ QSL L Sbjct: 59 GLFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNQYQSLDKL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSSLRR+ L+ + + RG + TRL+KL+N + AI+LA AG+ RL Sbjct: 119 PKGAVVGTSSLRRQCQLMAAYPHLEIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGM 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I+ +++E P+ GQGA+ IET +++ + + +NH+ T V ERA A L Sbjct: 179 PERIRSFISVEQSLPAAGQGAVGIETRLDDQRVLSYLAKLNHQPTAYRVIAERAMNAHLQ 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I GFA + L +V + DG S A +G + A + Sbjct: 239 GGCQVPIGGFATLENDELTLNALVGSLDGSTIIRASGVAPVDKAEQLGIEVATKLLAQGA 298 Query: 302 KNVF 305 + Sbjct: 299 DKIL 302 >gi|12655813|gb|AAK00605.1|AF221100_2 porphobilinogen deaminase [Selenomonas ruminantium subsp. ruminantium] Length = 313 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 170/306 (55%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+K IGTR S LAL A + L + + P + + ++TKGD+I + L +IGG Sbjct: 1 MKKDTIVIGTRSSKLALWQAEYVKGRLEEEY--PGLKVELKLMTTKGDKILDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E ++SG ID AVHS KDMPT+L +GL ++A R D D +S ++ Sbjct: 59 KGLFTKELEMDMLSGGIDLAVHSLKDMPTELPEGLTLAAITKRFDPGDAVVSPKFKTFAA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRRKA LL R D+++ D RG + TRL KL + AI+LA AG+KRL Sbjct: 119 LPCGAKVGTSSLRRKAQLLHARPDLNICDLRGNVNTRLAKLESENFDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I E+L + P+ GQGA+ IET ++ +E++ +N E T ERAFL + Sbjct: 179 FGERITEVLPRDMVLPAVGQGALAIETREDDADMREMLAFLNDEATVHCAKAERAFLGRV 238 Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ + +A + ++ + DG+ + +G +A +G A+ + Sbjct: 239 EGGCQVPVGVYAVPAANDEIQVEAVIASLDGQRLYRDKLSGKASEAEKLGVTLAEKLLAA 298 Query: 300 SNKNVF 305 + + Sbjct: 299 GGQKIL 304 >gi|169634609|ref|YP_001708345.1| porphobilinogen deaminase [Acinetobacter baumannii SDF] gi|169153401|emb|CAP02532.1| porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Acinetobacter baumannii] Length = 314 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 107/303 (35%), Positives = 169/303 (55%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +I TR SPLAL A + L ++H P + ++ T+GD+I + L +IGGKG Sbjct: 10 MKTLKIATRQSPLALWQAEHICARLQELH--PDLTVELVKFVTQGDKILDTPLAKIGGKG 67 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ + DL Sbjct: 68 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLP 127 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRRK+ +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL Sbjct: 128 QGAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLA 187 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ + P+ GQGA+ +E ++ + L++ + H +T V ERAF A L+G Sbjct: 188 ERIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDICVRAERAFNAYLEG 247 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+A + ++ G V + DG+ +A +G + A+ + Sbjct: 248 GCQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAG 307 Query: 303 NVF 305 ++ Sbjct: 308 DLL 310 >gi|15603677|ref|NP_246751.1| porphobilinogen deaminase [Pasteurella multocida subsp. multocida str. Pm70] gi|12722234|gb|AAK03896.1| Pbg [Pasteurella multocida subsp. multocida str. Pm70] Length = 312 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 165/305 (54%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K RI TR SPLAL A ++ L +H + ++P+ TKGD I + L +IGG Sbjct: 5 MTRKSLRIATRQSPLALWQANYVKACLEKIHA--GLVVELVPMVTKGDVILDTPLAKIGG 62 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ GE D AVHS KD+P + GL +S RED RD F+S++ ++L + Sbjct: 63 KGLFVKELEQALLKGEADIAVHSMKDVPMQFPAGLMLSTICQREDPRDAFVSNSYRTLME 122 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L + R D+ + RG + TRL KL+N AI+LA AG+ RL Sbjct: 123 LPAGAVVGTSSLRRQCQLKQLRPDLHIHSLRGNVGTRLAKLDNGDYDAIILAAAGLIRLG 182 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +++ I ++++ P+ GQGA+ IE + + L+ + +T V ERA L Sbjct: 183 QQQRITSLIDVTQCLPAVGQGAVGIECRQEA-EIELLLAPLADPETTACVLAERAMNRHL 241 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + L+ +V DG DA +G A+ + Sbjct: 242 QGGCQVPIAGYAIIEEGQLFLRALVGEVDGSSILRAEGRSAVADAETLGIQVAEKLLQQG 301 Query: 301 NKNVF 305 + Sbjct: 302 ADKIL 306 >gi|227823724|ref|YP_002827697.1| porphobilinogen deaminase [Sinorhizobium fredii NGR234] gi|227342726|gb|ACP26944.1| porphobilinogen deaminase [Sinorhizobium fredii NGR234] Length = 309 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 157/305 (51%), Positives = 208/305 (68%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA ETR L H +PP ++ LSTKGDRIT+R L EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQTHETRDRLAAAHGLPPEMFEVVVLSTKGDRITDRPLAEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E++L+SG++D AVHS+KDMPTKL GL +SA+LPREDIRD F+ TA L + Sbjct: 61 KGLFTEELEQQLLSGDLDFAVHSSKDMPTKLPDGLFLSAFLPREDIRDAFVGRTAPRLVE 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R DI+VI +RG++ETRL KL + LLA+AG+KRL Sbjct: 121 LPEGATVGSSSLRRQALIRRLRPDINVITYRGQVETRLRKLAEGQVDGTLLAFAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V E+L+ ++FPP+P QGAICIE+ + + L+ I+ T ++V CER FLA L Sbjct: 181 MTDVPTELLDPKEFPPAPAQGAICIESRDGDDRVNALLAAIDDPRTHEAVACERGFLATL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG+A G+ + F G++L DG H V +G DA +GR A + IR + Sbjct: 241 DGSCRTPIAGYAQSDGTYIRFSGMILTPDGATSHRVEIDGKAQDATELGRKAGEQIRDKA 300 Query: 301 NKNVF 305 F Sbjct: 301 GPGFF 305 >gi|24211767|sp|Q9CK24|HEM3_PASMU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 309 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 165/305 (54%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K RI TR SPLAL A ++ L +H + ++P+ TKGD I + L +IGG Sbjct: 2 MTRKSLRIATRQSPLALWQANYVKACLEKIHA--GLVVELVPMVTKGDVILDTPLAKIGG 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ GE D AVHS KD+P + GL +S RED RD F+S++ ++L + Sbjct: 60 KGLFVKELEQALLKGEADIAVHSMKDVPMQFPAGLMLSTICQREDPRDAFVSNSYRTLME 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L + R D+ + RG + TRL KL+N AI+LA AG+ RL Sbjct: 120 LPAGAVVGTSSLRRQCQLKQLRPDLHIHSLRGNVGTRLAKLDNGDYDAIILAAAGLIRLG 179 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +++ I ++++ P+ GQGA+ IE + + L+ + +T V ERA L Sbjct: 180 QQQRITSLIDVTQCLPAVGQGAVGIECRQEA-EIELLLAPLADPETTACVLAERAMNRHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + L+ +V DG DA +G A+ + Sbjct: 239 QGGCQVPIAGYAIIEEGQLFLRALVGEVDGSSILRAEGRSAVADAETLGIQVAEKLLQQG 298 Query: 301 NKNVF 305 + Sbjct: 299 ADKIL 303 >gi|254700531|ref|ZP_05162359.1| porphobilinogen deaminase [Brucella suis bv. 5 str. 513] gi|261751035|ref|ZP_05994744.1| porphobilinogen deaminase [Brucella suis bv. 5 str. 513] gi|261740788|gb|EEY28714.1| porphobilinogen deaminase [Brucella suis bv. 5 str. 513] Length = 314 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 142/305 (46%), Positives = 197/305 (64%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +IG R S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGK Sbjct: 7 KNGTLKIGARGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGK 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFTEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL Sbjct: 67 GLFTEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDL 126 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL Sbjct: 127 PQGATVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGL 186 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 VI ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LD Sbjct: 187 ADVITDLLDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALD 246 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC++ IAG A +G L F G++L DG+ HEV+ G DA +G DAA +R ++ Sbjct: 247 GSCRTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEGVVSDAAALGTDAANRVRAMAG 306 Query: 302 KNVFN 306 + F+ Sbjct: 307 PHFFD 311 >gi|218781846|ref|YP_002433164.1| porphobilinogen deaminase [Desulfatibacillum alkenivorans AK-01] gi|218763230|gb|ACL05696.1| porphobilinogen deaminase [Desulfatibacillum alkenivorans AK-01] Length = 310 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 119/301 (39%), Positives = 167/301 (55%), Gaps = 2/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR SPLAL A + L + P ++ + TKGD+I + L ++GGKGLF Sbjct: 7 IKIGTRGSPLALWQAEHVAALLERRN--PNVKTELVVIKTKGDKILDVPLAKVGGKGLFV 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G D AVHS KD+P++ GL ++A + RED RD I A+ L DL ++ Sbjct: 65 KEIEESLLDGRTDMAVHSMKDVPSEFPPGLCLAAIMEREDPRDALICSRAKGLLDLPPNA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSSLRR A LL D+ + RG I TRL+KL + AI+LA AG+KR+ + + Sbjct: 125 KIGTSSLRRSAQLLALMPDLQIEPLRGNIGTRLDKLTSLNLDAIVLAAAGVKRMAMDDKV 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E + E P+ GQGA+ IE ++P A L + +NHE T V ERAFL LDG C+ Sbjct: 185 SEYIPEETVLPAVGQGAMGIEIREDDPVAGPLARALNHEPTQVIVTGERAFLKRLDGGCQ 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A KG L G++ DG S +G + DA +G A+ + K V Sbjct: 245 VPVAAHGRLKGDFLQLTGVIAGVDGTPIFRDSVSGKKEDAKELGVKLAEKLLNAGGKAVL 304 Query: 306 N 306 + Sbjct: 305 D 305 >gi|153875202|ref|ZP_02003104.1| porphobilinogen deaminase [Beggiatoa sp. PS] gi|152068334|gb|EDN66896.1| porphobilinogen deaminase [Beggiatoa sp. PS] Length = 309 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 112/304 (36%), Positives = 166/304 (54%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K RI TR SPLAL R L H P I ++ ++T+GD+I + L +IGGK Sbjct: 3 NKNIIRIATRKSPLALWQTHHVRDILCHAH--PQLQIELVEMTTQGDKILDVPLAKIGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L G++D AVHS KD+P + GL + + RE+ D F+S+ L Sbjct: 61 GLFVKELENGLFEGKVDIAVHSMKDVPVEFPPGLILPVIMEREEPYDAFVSNHYSGFTAL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +++GTSSLRR+ LL R D+ + RG + TRL KL+N AI+LA AG+KRL Sbjct: 121 PQGAIVGTSSLRRQCQLLVLRPDLQIRTLRGNVGTRLKKLDNGDYDAIILAAAGLKRLGM 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I+E+L E P+ GQGAI IE ++ + Q+L+ V+NH+ T + + ERA +L+ Sbjct: 181 AERIREVLKPEVMLPAIGQGAIGIECRADDTETQQLIAVLNHKPTQERLKAERALNEQLN 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ IAG+A + + G+V DGK G A +G++ A + Sbjct: 241 GGCQVPIAGYAEIEAEMMTVRGLVGDIDGKEVLHHKVQGPIESAETLGKELATELLAQGA 300 Query: 302 KNVF 305 + Sbjct: 301 DRLL 304 >gi|330876446|gb|EGH10595.1| porphobilinogen deaminase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 313 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLEIRFLRGNVNTRLAKLDGGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G++ + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVQVAEALLAQG 298 Query: 301 NKNVF 305 + Sbjct: 299 AAEIL 303 >gi|70733286|ref|YP_263060.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf-5] gi|123734674|sp|Q4K3X3|HEM3_PSEF5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|68347585|gb|AAY95191.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf-5] Length = 313 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L + H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLQEAH--PGLVVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ + D AVHS KD+P +GL + RED RD F+S+T SL + Sbjct: 59 KGLFVKELETALLENQADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYASLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPEGSVVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++H DT V ERA L Sbjct: 179 FEDRISSSISVDDSLPAGGQGAVGIECRSADIEIHALLAPLHHADTASRVTAERALNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G + G R A +G A + Sbjct: 239 NGGCQVPIACYAVLEGEQIWLRGLVGEPSGGLLLSAEARGPRASAAELGVQVADALLAQG 298 Query: 301 NKNVF 305 ++ Sbjct: 299 ADDIL 303 >gi|325576792|ref|ZP_08147407.1| hydroxymethylbilane synthase [Haemophilus parainfluenzae ATCC 33392] gi|325160998|gb|EGC73116.1| hydroxymethylbilane synthase [Haemophilus parainfluenzae ATCC 33392] Length = 310 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 107/302 (35%), Positives = 163/302 (53%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A + L H P ++ ++P+ TKGD I + L +IGGKGL Sbjct: 5 KTLKIATRQSPLALWQANFVKDQLEKFH--PTLSVELVPMVTKGDVILDSPLAKIGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ D AVHS KD+P + +GL +S RED RD F+S+T +SL DL Sbjct: 63 FVKELENALLEKRADIAVHSMKDVPMEFPEGLGLSVICKREDPRDAFVSNTYRSLDDLPQ 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+ L + R D+ + RG + TRL+KL+N + AI+LA AG+ RL + Sbjct: 123 GAIVGTSSLRRQCQLKQLRPDLDIRSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGLAE 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + +E P+ GQGA+ IE V++ + + L+ ++ T V ERA L G Sbjct: 183 RIASFIEVEQSLPAAGQGAVGIECRVDDEEVKALLAPLSDATTTTCVLAERAMNTRLQGG 242 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I G+A + ++ +V +DG +A +G A+ + Sbjct: 243 CQVPIGGYAIEQNGEIFLRALVGETDGSAIIRAEGKSAVENAEALGVSIAEQLLAQGADK 302 Query: 304 VF 305 + Sbjct: 303 IL 304 >gi|220933221|ref|YP_002512120.1| Hydroxymethylbilane synthase [Thioalkalivibrio sp. HL-EbGR7] gi|254800261|sp|B8GSU8|HEM3_THISH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|219994531|gb|ACL71133.1| Hydroxymethylbilane synthase [Thioalkalivibrio sp. HL-EbGR7] Length = 316 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 116/306 (37%), Positives = 166/306 (54%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLA+ A + + H P + ++ ++T+GDRI + L ++GG Sbjct: 1 MPLDTLRIATRKSPLAVWQAEHVAALVKARH--PGVRVELVGMTTQGDRILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +L +GL + L RED RD F+S+T +SL + Sbjct: 59 KGLFVKELETGLLEGRADIAVHSMKDVPMELPEGLCLPVILDREDPRDAFVSNTFKSLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+ L ++D RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPRDARVGTSSLRRQCQLRHDHPHFQILDLRGNVNTRLAKLDAGEFDAIILAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I + E P+ GQGAI IE N+P+ L+ ++ DT V ERA A L Sbjct: 179 FEVRIASEITPEQSLPAIGQGAIGIECRENDPEVMALIGSLDDPDTHVRVAAERAMNARL 238 Query: 241 DGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ IAG+A TL G+V DG + +G R +A +GR A + Sbjct: 239 NGGCQVPIAGYAELTDADTLRLRGLVGEPDGSLILRAELSGPRAEAEALGRAVADLLLHE 298 Query: 300 SNKNVF 305 + Sbjct: 299 GAGPIL 304 >gi|322421444|ref|YP_004200667.1| porphobilinogen deaminase [Geobacter sp. M18] gi|320127831|gb|ADW15391.1| porphobilinogen deaminase [Geobacter sp. M18] Length = 318 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 165/305 (54%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A +S L + P + + + T GD+I + L ++GG Sbjct: 1 MALKELRIGTRASQLALWQANWVKSELEKRY--PDMTVTLKKIKTIGDKILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD IS + D Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISRGVKFA-D 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A LL+ R D+ ++ RG ++TR++KL A++LA AG+ RL Sbjct: 118 LPQGARIGTSALRRQAQLLKVRPDLEMVIIRGNVQTRMDKLETEGLDAVILAAAGLNRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E+L + P+ GQGA+ IE ++N + ++ + NH DT +V ERA L Sbjct: 178 FADQITELLPTDLSLPAIGQGALGIECSLSNEEVKDAISFFNHPDTSRAVRAERALLWRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA + G L G + + DGK+ + G + +G A+ + Sbjct: 238 EGGCQVPIAAYGEVTGDQLKLTGFIASVDGKVSVKGVVTGPADECEKLGVKLAEQLLSDG 297 Query: 301 NKNVF 305 + Sbjct: 298 GHAIL 302 >gi|292493894|ref|YP_003529333.1| porphobilinogen deaminase [Nitrosococcus halophilus Nc4] gi|291582489|gb|ADE16946.1| porphobilinogen deaminase [Nitrosococcus halophilus Nc4] Length = 310 Score = 273 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 116/306 (37%), Positives = 163/306 (53%), Gaps = 3/306 (0%) Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M K RI TR S LAL A +L H P ++ ++ +ST+GD+I + L ++G Sbjct: 1 MSAKTCLRIATRKSLLALWQAEYVADTLR--HHHPGLSVELVRMSTQGDKILDTPLAKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E+ L+SGE D AVHS KD+P L + L IS RED RD F+S+ Q L Sbjct: 59 GKGLFVKELEQGLLSGEADIAVHSMKDVPVVLPEDLHISVICEREDPRDAFVSNHWQQLD 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + +GTSSLRR++ + R D V+D RG + TRL KL+NN+ I+LA +G+KRL Sbjct: 119 SLPEGARVGTSSLRRQSQVRERRPDFHVLDLRGNVNTRLAKLDNNEFDGIVLAASGLKRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I E+L E P+ GQGAI IE + +EL+KV+ H T ++ ERA Sbjct: 179 GLTDRITELLAPEVSLPAIGQGAIGIECRKGDTATEELLKVLEHTPTRTTIRAERALNER 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L G C+ IA +A G L +V DG G +A +G + + Sbjct: 239 LAGGCQVPIAAYAELDGERLRLRALVGQPDGGKVIRGEMWGTPEEAEVLGVSLGEDLLRR 298 Query: 300 SNKNVF 305 + Sbjct: 299 GADKIL 304 >gi|28867368|ref|NP_789987.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato str. DC3000] gi|38257983|sp|Q88B91|HEM3_PSESM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|28850602|gb|AAO53682.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato str. DC3000] Length = 313 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + +AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYNAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G++ + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVQVAEALLAQG 298 Query: 301 NKNVF 305 + Sbjct: 299 AAEIL 303 >gi|330501254|ref|YP_004378123.1| porphobilinogen deaminase [Pseudomonas mendocina NK-01] gi|328915540|gb|AEB56371.1| porphobilinogen deaminase [Pseudomonas mendocina NK-01] Length = 312 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 161/305 (52%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG Sbjct: 1 MS-REIRIATRKSALALWQAEYVKARLEQAH--PGLKVSLVPMVSRGDKLLDAPLAKIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 58 KGLFVKELETALLENEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTYDSLDA 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 118 LPAGSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ ++ ED P+ GQGA+ IE + L+ ++H +T V ERA L Sbjct: 178 FADRIRSSISAEDSLPAGGQGAVGIECRSADSDVHALLAPLHHRETALRVTAERALNKHL 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A + L+ G+V DG + DA +G A+ + Sbjct: 238 NGGCQVPIACYALLEDDQLWLRGLVGQPDGGLLLRAEERAASGDAEALGVRVAEALLAQG 297 Query: 301 NKNVF 305 + Sbjct: 298 ADAIL 302 >gi|294649011|ref|ZP_06726459.1| hydroxymethylbilane synthase [Acinetobacter haemolyticus ATCC 19194] gi|292825146|gb|EFF83901.1| hydroxymethylbilane synthase [Acinetobacter haemolyticus ATCC 19194] Length = 305 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 113/303 (37%), Positives = 164/303 (54%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +I TR SPLAL A RS L ++ P + ++ T+GD+I + L +IGGKG Sbjct: 1 MKTLKIATRQSPLALWQAEHIRSRLNALY--PDLTVELVKFVTQGDKILDTPLAKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ G D AVHS KD+P L GL ++ RED D F+S+ +DL Sbjct: 59 LFVKELEAALLDGRADLAVHSMKDVPMHLPDGLTLAVICEREDPLDAFVSNQYARFEDLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRRK +L+ R D+ ++D RG + TRL+KL++ AI+LA AG+KRL Sbjct: 119 QGAKVGTSSLRRKCQILQQRPDLEIVDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLA 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I+ L P+ GQGA+ +E ++ K L++ + HE+T V ERA A L+G Sbjct: 179 DRIRHCLAPVLSLPAVGQGALGLECRADDEKLLALIQPLQHEETSICVRAERALNAYLEG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+A L G V + DGK + G+ A +G AQ + Sbjct: 239 GCQVPIAGYATIVNHQLQIEGRVGSVDGKTLLKKQLIGSTDQAEQLGEQLAQDLLDQGAG 298 Query: 303 NVF 305 + Sbjct: 299 ELL 301 >gi|213971710|ref|ZP_03399816.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato T1] gi|301386723|ref|ZP_07235141.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato Max13] gi|302062167|ref|ZP_07253708.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato K40] gi|302130377|ref|ZP_07256367.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213923528|gb|EEB57117.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato T1] Length = 313 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL Sbjct: 59 KGLFVKELETALLEDSADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + +AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYNAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G++ + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVQVAEALLAQG 298 Query: 301 NKNVF 305 + Sbjct: 299 AAEIL 303 >gi|332139557|ref|YP_004425295.1| porphobilinogen deaminase [Alteromonas macleodii str. 'Deep ecotype'] gi|327549579|gb|AEA96297.1| porphobilinogen deaminase [Alteromonas macleodii str. 'Deep ecotype'] Length = 312 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 106/304 (34%), Positives = 166/304 (54%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RI TR S LAL A ++ L++ + P + ++P+ST+GD+I + L +IGGK Sbjct: 6 TTRTVRIATRKSALALWQAEYVKAKLLEHY--PSMTVELVPMSTQGDKILDTPLAKIGGK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P + +G + A RE+ D F+S+ SL L Sbjct: 64 GLFIKELEIAMLEGRADIAVHSMKDVPVEFPEGFGLHAICERENPFDAFVSNNHDSLDAL 123 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +++GTSSLRR+ + ++R D+ + D RG + TRL KL+ + AI+LA AG+ RLK Sbjct: 124 PEGAIVGTSSLRRQCQIRKYRPDLIIKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLKM 183 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I+ L + P+ GQGA+ IE ++ + L++ +NH DT V ERA L+ Sbjct: 184 QSRIRMALPADISLPAVGQGAVGIECRNDDEELIALLQALNHADTHTRVTAERAMNERLE 243 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I FA L G+V DG S +R A ++G + A+ + Sbjct: 244 GGCQVPIGSFATLDNDVLTLTGMVGKPDGSELLFASATASREKAKDMGIEVAEALLEQGA 303 Query: 302 KNVF 305 + Sbjct: 304 GEIL 307 >gi|300115116|ref|YP_003761691.1| porphobilinogen deaminase [Nitrosococcus watsonii C-113] gi|299541053|gb|ADJ29370.1| porphobilinogen deaminase [Nitrosococcus watsonii C-113] Length = 314 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 118/306 (38%), Positives = 166/306 (54%), Gaps = 3/306 (0%) Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M K RI TR S LAL A ++L H P ++ ++ +ST+GD+I + L +IG Sbjct: 5 MSAKTCLRIATRKSLLALWQAEYVANTLR--HHYPDLSVELVRMSTQGDKILDTPLAKIG 62 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E+ L SGE D AVHS KD+P L + L I+ R D RD F+S+ Q L Sbjct: 63 GKGLFIKELEQGLFSGEADIAVHSMKDVPVDLPENLHIAVICQRGDPRDAFVSNHWQDLD 122 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + +GTSSLRR++ + R D V+D RG + TRL KL+NN+ I+LA AG+KRL Sbjct: 123 SLPEGARLGTSSLRRQSQVRERRPDFQVLDLRGNVNTRLAKLDNNEFDGIILATAGLKRL 182 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I+E L E P+ GQGAI IE + +EL+KV+ H T ++ ERA A Sbjct: 183 ELTHRIRESLAPEVSLPAIGQGAIGIECRKGDTATEELIKVLEHPPTRITLQAERALNAR 242 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L G C+ IAG+A + L +V DG G DA ++G + + Sbjct: 243 LAGGCQVPIAGYAELEDERLRLRALVGQPDGGRVIRGETWGMPGDAESLGASLGEDLLRR 302 Query: 300 SNKNVF 305 + Sbjct: 303 GADKIL 308 >gi|331018514|gb|EGH98570.1| porphobilinogen deaminase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 313 Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + +AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYNAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT + ER+ L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRLIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G++ + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVQVAEALLAQG 298 Query: 301 NKNVF 305 + Sbjct: 299 AAEIL 303 >gi|251793296|ref|YP_003008024.1| porphobilinogen deaminase [Aggregatibacter aphrophilus NJ8700] gi|247534691|gb|ACS97937.1| porphobilinogen deaminase [Aggregatibacter aphrophilus NJ8700] Length = 308 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 162/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K +I TR SPLAL A + L ++ P + ++P+ TKGD I + L +IGG Sbjct: 1 MLEKTLKIATRQSPLALWQANYVKDCLQQLY--PDLIVELVPMVTKGDVILDSPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L++ E D AVHS KD+P + +GL ++ RED RD F+S++ ++ + Sbjct: 59 KGLFVKELENALLNKEADIAVHSMKDVPMQFPEGLGLAVICKREDPRDAFVSNSYRTFDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + RG + TRL+KL+N AI+LA AG+ RL Sbjct: 119 LPQSAVVGTSSLRRQCQLKALRPDLDIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I + +E P+ GQGA+ IE ++ + ++L+ + +T V ERA L Sbjct: 179 LADRIASFIEVEQSLPAAGQGAVGIECRTDDVQVKQLLAPLADAETTCCVLAERAMNNHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I G+A + LY +V DG +A +G A+ + Sbjct: 239 QGGCQVPIGGYAVLQQGQLYLRALVGNVDGSQIIRAEGKSAVKNADVLGVQIAEQLLAQG 298 Query: 301 NKNVF 305 + Sbjct: 299 ADKIL 303 >gi|254717954|ref|ZP_05179765.1| porphobilinogen deaminase [Brucella sp. 83/13] gi|265982897|ref|ZP_06095632.1| porphobilinogen deaminase [Brucella sp. 83/13] gi|306838958|ref|ZP_07471782.1| porphobilinogen deaminase [Brucella sp. NF 2653] gi|264661489|gb|EEZ31750.1| porphobilinogen deaminase [Brucella sp. 83/13] gi|306405961|gb|EFM62216.1| porphobilinogen deaminase [Brucella sp. NF 2653] Length = 314 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 142/305 (46%), Positives = 198/305 (64%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +IGTR S LALA A+ TR L + H +P I I+P+ST GDRI +R L+E+GGK Sbjct: 7 KNGTLKIGTRGSKLALAQAYLTRRLLQEAHGLPEDAIEILPMSTAGDRIQDRPLSEVGGK 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFTEEIE+ L G ID AVHS KDMPT L +GL +S +L RED RD FI +A+ DL Sbjct: 67 GLFTEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDL 126 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +++G+SSLRR+AL+ R R DI V+ +RG ++TRL KL+ + LA AG++RL Sbjct: 127 PQGAIVGSSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVGGTFLACAGLRRLGL 186 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 VI ++L+ FPP+PGQGAI IE+ + + + L+ + H +T ++ CERAFL LD Sbjct: 187 ADVITDLLDPSVFPPAPGQGAIGIESRIGDERIDALLAPLAHRETQIALACERAFLGALD 246 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC++ IAG A +G L F G++L DG+ HEV+ DA +G DAA +R ++ Sbjct: 247 GSCRTPIAGLATVEGDRLSFRGMILTPDGRQAHEVTAEEAVSDAAALGTDAANRVRAMAG 306 Query: 302 KNVFN 306 + F+ Sbjct: 307 PHFFD 311 >gi|256821394|ref|YP_003145357.1| porphobilinogen deaminase [Kangiella koreensis DSM 16069] gi|256794933|gb|ACV25589.1| porphobilinogen deaminase [Kangiella koreensis DSM 16069] Length = 311 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 169/305 (55%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLA+ A +S L +H P + ++P++T+GD+I LT+IGG Sbjct: 1 MSISTLRIATRQSPLAMWQAEYVQSRLQQLH--PDLTVELVPMTTQGDKILGTPLTKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P + +GL++ RED D F+S+ +L D Sbjct: 59 KGLFVKELEQAMLEGRADIAVHSMKDVPYQFPEGLELKVICEREDPTDAFVSNKYHNLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRRK LLR R D+ + D RG + TRL+KL++ AI+LA AG+KRL Sbjct: 119 LPCGANVGTSSLRRKIQLLRARPDLKITDLRGNVGTRLSKLDDGNYDAIVLASAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ E P+PGQGA+ IE N+P +++ + E T V ER L Sbjct: 179 LEERIRSQFEPELMLPAPGQGAVGIEARTNDPDLDAILQPLQDETTSLRVLAERTITKTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 SC+ +A FA TL +V D + E S G DA+ IG +Q + + Sbjct: 239 QASCQVPVAAFATINDDTLSLRALVGGVD-QQIIEASAEGPAQDALAIGHKVSQELLELG 297 Query: 301 NKNVF 305 + + Sbjct: 298 ARELI 302 >gi|90416175|ref|ZP_01224107.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2207] gi|90331900|gb|EAS47114.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2207] Length = 326 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 104/304 (34%), Positives = 162/304 (53%), Gaps = 4/304 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RI TR SPLAL A ++ L++ H P ++ ++ ++T+GD + + L ++GGKGL Sbjct: 18 QTIRIATRKSPLALWQAEFVKAKLLENH--PDLDVQLVAMTTRGDVLLDTPLAKVGGKGL 75 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E ++ D AVHS KD+P + GL ++ RED D F+S+ +L +L Sbjct: 76 FVKELEVAMLENRADIAVHSMKDVPMEFPPGLGLTVICEREDPLDAFVSNRYANLAELPP 135 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+GTSSLRR+ + D+ + D RG + TRL KL+ AI+LA AG+ RL E Sbjct: 136 GSVVGTSSLRRQCQIRAAFPDLQIKDLRGNVNTRLAKLDYGDYDAIILASAGLIRLGMEA 195 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I L E P+ GQGA+ IE +++ EL+K + H T V ERA L+G Sbjct: 196 RIASRLESELCLPAGGQGAVGIECRLDDQATIELLKPLEHSQTRIRVTAERALNRRLEGG 255 Query: 244 CKSAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IA +A G +L G+V + DG + + + A +G + A+ + Sbjct: 256 CQVPIACYAELDEAGESLQLRGLVGSVDGSLILQDQLSAPVAQAEQLGIELAERLLAAGA 315 Query: 302 KNVF 305 + Sbjct: 316 GEIL 319 >gi|330965074|gb|EGH65334.1| porphobilinogen deaminase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 313 Score = 272 bits (694), Expect = 6e-71, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T +SL Sbjct: 59 KGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLEIRFLRGNVNTRLAKLDGGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++HEDT V ER+ L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G ++ G+V G++ + A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDDVWLRGLVGDPSGRVLLHADARAPQTSAQALGVHVAEALLAQG 298 Query: 301 NKNVF 305 + Sbjct: 299 AAEIL 303 >gi|253699058|ref|YP_003020247.1| porphobilinogen deaminase [Geobacter sp. M21] gi|259647798|sp|C6DYY8|HEM3_GEOSM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|251773908|gb|ACT16489.1| porphobilinogen deaminase [Geobacter sp. M21] Length = 318 Score = 272 bits (694), Expect = 6e-71, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 166/305 (54%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A +S L + P + + + T GD+I + L ++GG Sbjct: 1 MALKELRIGTRASQLALWQANWVKSELEKRY--PDMTVTLTKIKTIGDKILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD IS+ + D Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISNNVKFA-D 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A LL+ R D+ ++ RG ++TR++KL A++LA AG+ RL Sbjct: 118 LPQGARIGTSALRRQAQLLKVRPDLEMVIIRGNVQTRMDKLKTEGLDAVILAAAGLNRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E+L + P+ GQGA+ IE +++N ++ + NH DT +V ERA L Sbjct: 178 FADQITELLPTDLSLPAIGQGALGIECNLSNQDVKDAISFFNHPDTSRAVRAERALLWRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA F G L G + + DGK+ + G D +G A+ + Sbjct: 238 EGGCQVPIAAFGEVTGDELKLTGFIASVDGKVSVKGVVTGPADDCEKLGVKLAEQLLSEG 297 Query: 301 NKNVF 305 + Sbjct: 298 GHAIL 302 >gi|254784450|ref|YP_003071878.1| hydroxymethylbilane synthase [Teredinibacter turnerae T7901] gi|237686105|gb|ACR13369.1| hydroxymethylbilane synthase [Teredinibacter turnerae T7901] Length = 324 Score = 272 bits (694), Expect = 6e-71, Method: Composition-based stats. Identities = 112/303 (36%), Positives = 170/303 (56%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR S LAL A +S L H P + ++PL+++GD+I + L ++GGKG Sbjct: 15 KHTLRIATRKSALALWQAEFVKSELCRHH--PELAVELVPLTSRGDKILDVPLAKVGGKG 72 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E+ +I+GE D AVHS KD+P + +GL ++ RED RD +S+ +L + Sbjct: 73 LFVKELEQAIIAGEADIAVHSMKDVPMEFPQGLGLAVICEREDPRDALVSNKYSNLDAIP 132 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR++ LL R D+ V RG + TRL KL+ + AI+LA AG+KRL+ Sbjct: 133 AGAVIGTSSLRRQSQLLAMRPDLEVTFLRGNVNTRLAKLDAGEYDAIILASAGLKRLQMV 192 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E + E P+ GQGA+ IE ++ + L++ ++H T +V ERA +L+G Sbjct: 193 DRIAEFIAPEVMLPAGGQGAVGIECRTDDQETLALLQPLHHGVTEQAVLAERAMNRKLEG 252 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I GFA + + L+ G+V DG G+ DA +G A+ + Sbjct: 253 GCQVPIGGFAIHQDNQLWVRGLVADPDGSEVLYDQVIGDPADAETLGVVLAEKLLAAGAD 312 Query: 303 NVF 305 + Sbjct: 313 AIL 315 >gi|237809861|ref|YP_002894301.1| porphobilinogen deaminase [Tolumonas auensis DSM 9187] gi|237502122|gb|ACQ94715.1| porphobilinogen deaminase [Tolumonas auensis DSM 9187] Length = 308 Score = 272 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 108/306 (35%), Positives = 161/306 (52%), Gaps = 5/306 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLAL A + L H P + ++P+ST+GD+I + L +IGG Sbjct: 1 MTE--LRIATRKSPLALWQANFVKQQLELHH--PGLQVTLVPMSTQGDKILDTPLAKIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ D AVHS KD+P GL ++ R+D D F+S S+ + Sbjct: 57 KGLFVKELEQAMLENRADIAVHSMKDVPVDFPDGLGLAVICERDDPYDAFVSSRFASVYE 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L R D+ + D RG + TRL KL+ AI+LA AG++RL Sbjct: 117 LPEGAVVGTSSLRRQCQLRAQRPDLVIRDLRGNVNTRLAKLDAGDYDAIILAAAGLRRLD 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K + I+ L E P+ GQGA+ IE + + + L+ + H T V ERA L Sbjct: 177 KAERIRSRLPPELSLPANGQGAVGIECRLGDTQTLALLASLEHATTRYCVMAERAMNRTL 236 Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G C+ I FA L+ G+V + DGK +G + A +G+ A+ + Sbjct: 237 QGGCQVPIGAFAEMQDNDHLWLRGLVGSVDGKQIIHGDISGPKEQAEELGKLLAEQLLVQ 296 Query: 300 SNKNVF 305 ++ Sbjct: 297 GADDIL 302 >gi|119484355|ref|ZP_01618972.1| Porphobilinogen deaminase [Lyngbya sp. PCC 8106] gi|119457829|gb|EAW38952.1| Porphobilinogen deaminase [Lyngbya sp. PCC 8106] Length = 321 Score = 272 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 106/307 (34%), Positives = 161/307 (52%), Gaps = 5/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIG+R S LAL + ++ L P + +ST+GD+I + L +IG KG Sbjct: 8 TRTVRIGSRKSQLALVQTYWVQAELKK--HFPDIEFEVHTMSTQGDKILDVALAKIGDKG 65 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119 LFT+E+E +++ + D AVHS KD+PT L +GL + RE+ D + H + L+ Sbjct: 66 LFTKELEVGMLNHDTDIAVHSLKDLPTNLPEGLMLGCVTERENPADALVVHERHKDKQLE 125 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +VIGTSSLRR A L + D RG + TRL KL+ AI+LA AG+KRL Sbjct: 126 TLPQGAVIGTSSLRRLAQLRHHFPHLEFKDIRGNLNTRLEKLDEGGYDAIILAVAGLKRL 185 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I + ++ + + GQGA+ IE + E++KV+ H T + ERAFL E Sbjct: 186 GMGDRIHQTISPDVSLHAVGQGALGIECRDGDENILEILKVLEHTPTAQRCHAERAFLRE 245 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I + + + L G+V + DGK + +G +A +G D A +R Sbjct: 246 LEGGCQVPIGVNSEVENNQLTLIGMVASLDGKRLIRDTVSGETTNAEQLGIDLAHRLREQ 305 Query: 300 SNKNVFN 306 K + + Sbjct: 306 GAKEILD 312 >gi|238756296|ref|ZP_04617611.1| Porphobilinogen deaminase [Yersinia ruckeri ATCC 29473] gi|238705502|gb|EEP97904.1| Porphobilinogen deaminase [Yersinia ruckeri ATCC 29473] Length = 315 Score = 271 bits (693), Expect = 8e-71, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 162/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A + L H + ++P+ T+GD I + L ++GG Sbjct: 3 MSDKIIRIATRQSPLAMWQAHYVQQLLQTCHS--GLKVELVPMVTRGDIILDTPLAKVGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + R+D RD F+S+ Q + D Sbjct: 61 KGLFVKELELALLEDRADIAVHSMKDVPIAFPQGLGLVTICERDDPRDAFVSNNYQRMDD 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L + R D+ V D RG + TRL+KL+ AI+LA AG+ RL Sbjct: 121 LPAGSIVGTSSLRRQCQLRQRRPDLIVKDLRGNVGTRLSKLDQGDYDAIILAVAGLNRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ ++ E+ P+ GQGA+ IE +++ + L+ +NH T V ERA L Sbjct: 181 LKDRIRYAMSPEESLPAVGQGAVGIECRLDDNLTRALLAPLNHRPTELRVCAERAMNTRL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + TL+ +V A DG R G A +G + A + Sbjct: 241 EGGCQVPIGSYAILEDDTLWLRALVGAPDGSQMICGERRGPATHAEQMGIELADELLSRG 300 Query: 301 NKNVF 305 K + Sbjct: 301 AKAIL 305 >gi|92115224|ref|YP_575152.1| hydroxymethylbilane synthase [Chromohalobacter salexigens DSM 3043] gi|91798314|gb|ABE60453.1| hydroxymethylbilane synthase [Chromohalobacter salexigens DSM 3043] Length = 311 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 102/305 (33%), Positives = 160/305 (52%), Gaps = 4/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RI TR S LAL A ++ L+ +H P + ++ ++T+GD+I + L ++GGKG Sbjct: 1 MQTLRIATRQSRLALWQAEHVKARLLALH--PGLEVELVAMTTRGDKILDSPLAKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E+ L+ G D AVHS KD+P +GL +S L D F+S+ SL L Sbjct: 59 LFVKELEEALLDGRADIAVHSMKDVPMHFPEGLGLSVILESGAPTDAFVSNDYASLDALP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +GTSSLRR + R D+ V++ RG ++TRL KL+ + AI+LA +G++RL+ Sbjct: 119 EGVRVGTSSLRRGLQVKEARPDLEVLNLRGNVQTRLGKLDGGEFEAIILATSGLQRLELG 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + L E P+ GQGA+ IE ++ EL+ ++H T V ERA LDG Sbjct: 179 HRITQELPPEVSLPACGQGALGIECRHDDESLLELLAPLDHPQTATRVRAERAMNTRLDG 238 Query: 243 SCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C+ I G+A + TL+ +V DG G+ + +G A+ + Sbjct: 239 GCQVPIGGYAVLEDGDRTLWLRALVGDPDGSRVLRAEGRGSADEPEALGVRIAESLLDQG 298 Query: 301 NKNVF 305 ++ Sbjct: 299 AGDIL 303 >gi|262375167|ref|ZP_06068401.1| porphobilinogen deaminase [Acinetobacter lwoffii SH145] gi|262310180|gb|EEY91309.1| porphobilinogen deaminase [Acinetobacter lwoffii SH145] Length = 310 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 116/306 (37%), Positives = 172/306 (56%), Gaps = 3/306 (0%) Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M+ K +I TR SPLAL A R+ L D+H + ++ T+GD+I + L +IG Sbjct: 1 MKFMKTLKIATRQSPLALWQAEHIRARLQDLHA--GLQVELVTFVTQGDKILDTPLAKIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+T S + Sbjct: 59 GKGLFVKELEAALLDGRADLAVHSMKDVPMALPEGLSLAVICEREDPLDAFVSNTYTSFE 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L + +GTSSLRRK +L+ R D+ +ID RG + TRL+KL+ + AI+LA AG+KRL Sbjct: 119 ELPQGAKVGTSSLRRKTQILKQRPDLDIIDLRGNVGTRLSKLDAGQYDAIILASAGLKRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I+ L E P+ GQGA+ +E ++ +L++ + H DT V ERAF A Sbjct: 179 GLAERIRHTLTPEVSLPAVGQGALGLECRTHDQTVLDLIQPLLHADTDACVRAERAFNAY 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ IAG+A K + G V + DG + + G DA +G A+ + Sbjct: 239 LEGGCQVPIAGYATLKEGVISIEGRVGSIDGAVLLRAQQTGKTADAEQLGVKLAKDLLDQ 298 Query: 300 SNKNVF 305 + Sbjct: 299 GAGELL 304 >gi|226951768|ref|ZP_03822232.1| porphobilinogen deaminase [Acinetobacter sp. ATCC 27244] gi|226837483|gb|EEH69866.1| porphobilinogen deaminase [Acinetobacter sp. ATCC 27244] Length = 305 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 114/303 (37%), Positives = 164/303 (54%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +I TR SPLAL A RS L ++ P + ++ T+GD+I + L +IGGKG Sbjct: 1 MKTLKIATRQSPLALWQAEHIRSRLNTLY--PDLTVELVKFVTQGDKILDTPLAKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ G D AVHS KD+P L GL ++ RED D F+S+ +DL Sbjct: 59 LFVKELEAALLDGRADLAVHSMKDVPMHLPDGLTLAVICEREDPLDAFVSNQYARFEDLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRRK +L+ R D+ +ID RG + TRL+KL++ AI+LA AG+KRL Sbjct: 119 QGAKVGTSSLRRKCQILQQRPDLEIIDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLA 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I+ L P+ GQGA+ +E ++ K L++ + HE+T V ERA A L+G Sbjct: 179 DRIRHCLAPVLSLPAVGQGALGLECRADDEKLLALIQPLQHEETSICVRAERALNAYLEG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+A L G V + DGK + G+ A +G AQ + Sbjct: 239 GCQVPIAGYATIVNHQLQIEGRVGSVDGKTLLKKQLIGSTDQAEQLGEQLAQDLLDQGAG 298 Query: 303 NVF 305 + Sbjct: 299 ELL 301 >gi|496214|gb|AAA18907.1| porophorbilinogen deaminase [Pseudomonas aeruginosa] Length = 314 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 111/307 (36%), Positives = 165/307 (53%), Gaps = 3/307 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSS-LMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + RI TR S LAL A S+ L H P + ++P++++GD++ + L +IG Sbjct: 1 MSSREIRIATRQSALALWQAEYVNSTGLEQAH--PGLTVTLLPMTSRGDKLLDAPLAKIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 GKGLFVKELETALLEGAADIAVHSMKDVPMDFPEGLGLYTICEREDPRDAFVSNTYASLE 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L SV+GTS L R+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 QLPAGSVVGTSRLGRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGVIRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E I+ ++++D P+ GQGA+ IE + L++ ++H DT V ERA Sbjct: 179 GFESRIRSSISVDDSLPAGGQGAVGIECRTADSDLHALLEPLHHTDTALRVTAERALNKR 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ IA +A +G L+ G+V DG DA +G A+ + Sbjct: 239 LNGGCQVPIACYAIREGDQLWLRGLVGQPDGTQLLRAEGRAPLADAEALGVRVAEDLLEQ 298 Query: 300 SNKNVFN 306 + + Sbjct: 299 GAEAILE 305 >gi|77164030|ref|YP_342555.1| porphobilinogen deaminase [Nitrosococcus oceani ATCC 19707] gi|76882344|gb|ABA57025.1| hydroxymethylbilane synthase [Nitrosococcus oceani ATCC 19707] Length = 310 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 120/306 (39%), Positives = 167/306 (54%), Gaps = 3/306 (0%) Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M K RI TR S LAL A +L H P NI ++ +ST+GD+I + L +IG Sbjct: 1 MSAKTCLRIATRKSLLALWQAEYVADTLR--HHYPDLNIELVRMSTQGDKILDTPLAKIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E+ L SGE D AVHS KD+P L + L I+ R D RD F+S+ Q L Sbjct: 59 GKGLFIKELEQGLFSGEADIAVHSMKDVPVDLPENLHIAVICQRGDPRDAFVSNHWQDLD 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + +GTSSLRR++ + R D V+D RG + TRL KL+NN+ AI+LA AG+KRL Sbjct: 119 SLPEGARVGTSSLRRQSQVRERRPDFQVLDLRGNVNTRLAKLDNNEFDAIILAAAGLKRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + I+E L E P+ GQGAI IE + +EL+KV+ H T ++ ERA A Sbjct: 179 ELTQRIRESLAPEVSLPAIGQGAIGIECRKGDTATEELIKVLEHPPTRITIRAERALNAR 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L G C+ IAG+A + L +V DG G +A ++G + + Sbjct: 239 LAGGCQVPIAGYAELEDERLRLRALVGQPDGGRVIRGETWGMPGEAESLGASLGEDLLRR 298 Query: 300 SNKNVF 305 + Sbjct: 299 GADKIL 304 >gi|254435152|ref|ZP_05048659.1| porphobilinogen deaminase [Nitrosococcus oceani AFC27] gi|207088263|gb|EDZ65535.1| porphobilinogen deaminase [Nitrosococcus oceani AFC27] Length = 314 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 120/306 (39%), Positives = 167/306 (54%), Gaps = 3/306 (0%) Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M K RI TR S LAL A +L H P NI ++ +ST+GD+I + L +IG Sbjct: 5 MSAKTCLRIATRKSLLALWQAEYVADTLR--HHYPDLNIELVRMSTQGDKILDTPLAKIG 62 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E+ L SGE D AVHS KD+P L + L I+ R D RD F+S+ Q L Sbjct: 63 GKGLFIKELEQGLFSGEADIAVHSMKDVPVDLPENLHIAVICQRGDPRDAFVSNHWQDLD 122 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + +GTSSLRR++ + R D V+D RG + TRL KL+NN+ AI+LA AG+KRL Sbjct: 123 SLPEGARVGTSSLRRQSQVRERRPDFQVLDLRGNVNTRLAKLDNNEFDAIILAAAGLKRL 182 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + I+E L E P+ GQGAI IE + +EL+KV+ H T ++ ERA A Sbjct: 183 ELTQRIRESLAPEVSLPAIGQGAIGIECRKGDTATEELIKVLEHPPTRITIRAERALNAR 242 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L G C+ IAG+A + L +V DG G +A ++G + + Sbjct: 243 LAGGCQVPIAGYAELEDERLRLRALVGQPDGGRVIRGETWGMPGEAESLGASLGEDLLRR 302 Query: 300 SNKNVF 305 + Sbjct: 303 GADKIL 308 >gi|254424552|ref|ZP_05038270.1| porphobilinogen deaminase [Synechococcus sp. PCC 7335] gi|196192041|gb|EDX87005.1| porphobilinogen deaminase [Synechococcus sp. PCC 7335] Length = 319 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 107/307 (34%), Positives = 159/307 (51%), Gaps = 5/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIG+R S LAL ++ L P + + T+GD+I + L++IG KG Sbjct: 7 TRTIRIGSRKSQLALVQTHWVQAELSKA--FPDITFEVSTMETQGDKILDVALSKIGDKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119 LFT+E+E ++S +D AVHS KD+PT+L +GL + RED D + H + L Sbjct: 65 LFTQELEDDMLSHRVDFAVHSLKDLPTQLPEGLMLGCVTEREDPADALVVHEKHKDKQLD 124 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +VIGTSSLRR A L D RG + TRL KL+ + AI+LA AG+ RL Sbjct: 125 TLPEGAVIGTSSLRRLAQLRHHFPHFQFKDIRGNVNTRLRKLDEGEYDAIVLAAAGLNRL 184 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I ++L E + GQGA+ IE + ++K + H T ERAFL E Sbjct: 185 DMSDRIHQLLPAEISLHAVGQGALGIECRSGDEDILTVIKALEHLPTAQRCYAERAFLRE 244 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I +G TL GIV + DG+ + + G DA ++G++ A+ +R Sbjct: 245 LEGGCQVPIGVNTRIEGDTLTLVGIVASLDGQQLIKDTVQGAPADAESMGKELAERLREQ 304 Query: 300 SNKNVFN 306 + + + Sbjct: 305 GAQKILD 311 >gi|167031229|ref|YP_001666460.1| porphobilinogen deaminase [Pseudomonas putida GB-1] gi|189028150|sp|B0KH05|HEM3_PSEPG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166857717|gb|ABY96124.1| porphobilinogen deaminase [Pseudomonas putida GB-1] Length = 313 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHADTADRVVAERALNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V G R A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRTAAETLGVQVAEDLLSQG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AEAIL 303 >gi|220910316|ref|YP_002485627.1| porphobilinogen deaminase [Cyanothece sp. PCC 7425] gi|219866927|gb|ACL47266.1| porphobilinogen deaminase [Cyanothece sp. PCC 7425] Length = 322 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 106/307 (34%), Positives = 160/307 (52%), Gaps = 5/307 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RIG+R S LAL + + L P + + +ST+GD+I + L +IG K Sbjct: 8 SSRTIRIGSRKSQLALVQTYWVQEQLQK--HFPDRSFEVHTMSTQGDKILDVALAKIGDK 65 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119 GLFT+E+E+ ++S E D AVHS KD+PT L GL + RE+ D + + + Sbjct: 66 GLFTKELEQGMLSQETDFAVHSLKDLPTHLPDGLILGCITERENPADALVMNEKYRDRPL 125 Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L +VIGTSSLRR A L + ++ D RG + TRL KL+ + A++LA AG++R Sbjct: 126 ETLPEGAVIGTSSLRRLAQLRHYFPHLTFKDVRGNVNTRLAKLDAGEYDALVLAVAGLQR 185 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L I +IL E + GQGA+ IE ++P+ L+K + H+ T ERAFL Sbjct: 186 LGFSDRIHQILPPEISLHAVGQGALGIECRSDDPEVLSLIKALEHQPTAWRCLAERAFLR 245 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 EL+G C+ I +G L G+V + DG+ + G A +G + AQ +R Sbjct: 246 ELEGGCQVPIGVNTQLEGDQLTLTGLVASLDGQRLIKDQITGAATTAEQMGTELAQRLRQ 305 Query: 299 ISNKNVF 305 + + Sbjct: 306 QGAEEIL 312 >gi|209526164|ref|ZP_03274695.1| porphobilinogen deaminase [Arthrospira maxima CS-328] gi|209493420|gb|EDZ93744.1| porphobilinogen deaminase [Arthrospira maxima CS-328] Length = 322 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 104/307 (33%), Positives = 159/307 (51%), Gaps = 5/307 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + RI +R S LAL + + L + P + +ST+GD+I + L +IG K Sbjct: 8 QTRTIRIASRKSQLALVQTYWVQEELQK--RFPDIKFEVHTMSTQGDKILDVALAKIGDK 65 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118 GLFT+E+E +++ + D AVHS KD+PT L +GL + RED D + +H + L Sbjct: 66 GLFTKELEVGMLNHDTDMAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVHENHRDKQL 125 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L +V+GTSSLRR A L + D RG + TRL KL+ + AI+LA AG+KR Sbjct: 126 DTLPPGAVVGTSSLRRLAQLRHNFPHLEFKDIRGNLNTRLQKLDEGQYDAIILAVAGLKR 185 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L I +++ E + GQGA+ +E + + E+VK + H T + ERAFL Sbjct: 186 LGMADRIHQVIPAEISLHAVGQGALGLECREGDTEIFEVVKALEHTVTAQRCHSERAFLR 245 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 EL+G C+ I +G L G+V + DGK + + G DA +G A ++ Sbjct: 246 ELEGGCQVPIGVNTMVEGDRLTLTGMVASLDGKRLIKDTVTGQASDAEQLGIQLAHKLKQ 305 Query: 299 ISNKNVF 305 + + Sbjct: 306 QGAEEIL 312 >gi|307546845|ref|YP_003899324.1| porphobilinogen deaminase [Halomonas elongata DSM 2581] gi|307218869|emb|CBV44139.1| porphobilinogen deaminase [Halomonas elongata DSM 2581] Length = 380 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 166/305 (54%), Gaps = 4/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RI TR S LA+ A R LM+VH P + ++ LST+GD+I + L ++GGKG Sbjct: 71 MQTLRIATRKSQLAMWQAEHVRDRLMEVH--PELTVELVALSTRGDQILDTPLAKVGGKG 128 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E+ ++ G D AVHS KD+P + + L +S L + D F+S+ SL +L Sbjct: 129 LFVKELEEAMLDGRADIAVHSMKDVPMQFPESLGLSVILAGAEPTDAFVSNQYASLDELP 188 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IGTSSLRR + R D+ V++ RG ++TRL KL+N + AILLA AG+KRL E Sbjct: 189 EGARIGTSSLRRGLQMRERRPDLEVLNLRGNVQTRLGKLDNGEFDAILLATAGLKRLGLE 248 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I + L E P+ GQGA+ IE +++ + L+ ++ DT V ERA L+G Sbjct: 249 ERITQELPPEICLPACGQGALGIECRMHDAELIGLLAPLDDPDTATRVRAERAMNTRLEG 308 Query: 243 SCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C+ IAG A + TL+ +V +G G+ + +G A+ + Sbjct: 309 GCQVPIAGHAVFENDGQTLWLRALVGNPEGTEVLRAEGRGSIHEPEALGIRVAEELLDQG 368 Query: 301 NKNVF 305 ++ Sbjct: 369 AGDIL 373 >gi|126725997|ref|ZP_01741839.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2150] gi|126705201|gb|EBA04292.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2150] Length = 313 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 131/311 (42%), Positives = 183/311 (58%), Gaps = 4/311 (1%) Query: 1 MEK----KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLT 56 M+K P +IGTR SPLALA A ETR L H + P I+ + T GD + +R L Sbjct: 1 MKKFTPQSPLKIGTRGSPLALAQAHETRDRLSKAHNLAPEAFEIVVIKTTGDIVQDRPLK 60 Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116 EIGGKGLFT+EIE+ ++SG+ID AVHS KDMP + GL I+ YLPRED+RD F+S +A Sbjct: 61 EIGGKGLFTKEIEEAMLSGDIDIAVHSMKDMPVEQPDGLAITCYLPREDVRDAFVSLSAD 120 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 S DL + +G+SSLRR+A L R D+++++FRG ++TR+ KL + A A LA AG+ Sbjct: 121 SFDDLRQGATVGSSSLRRRAQLAHRRPDLNLVEFRGNVQTRMRKLGDGVADATFLAMAGL 180 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 RL V + L + F P+ QGAI IE + + E++ I+ + T D + ERAF Sbjct: 181 IRLGMSDVARLPLETDVFLPAVAQGAIGIEQRIGDSVISEMLTAIHDQHTGDLLAAERAF 240 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 LA ++GSC++ IAG A L+F +L DG + +G D IGR A + Sbjct: 241 LARVEGSCQTPIAGLAEIIDGKLHFRAEILRPDGSEAITGAASGEIADGAAIGRQVADDL 300 Query: 297 RFISNKNVFNF 307 + F + Sbjct: 301 LARAPTGFFEW 311 >gi|126666605|ref|ZP_01737583.1| porphobilinogen deaminase [Marinobacter sp. ELB17] gi|126628993|gb|EAZ99612.1| porphobilinogen deaminase [Marinobacter sp. ELB17] Length = 313 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 108/306 (35%), Positives = 169/306 (55%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L +H + ++ + T GD+I + L ++GG Sbjct: 1 MSARNLRIATRSSALALWQAEFIKAELERLHS--NVTVELVKIKTLGDKILDVPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ G D AVHS KD+P +GL + A R+D D FIS+ SL D Sbjct: 59 KGLFVKELEEAMLDGRADLAVHSMKDVPMAFPEGLGLVAICERDDPTDAFISNHFSSLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L++V+GTSSLRR++ L R D+ + RG + TRL KL+ AI+LA +G+KRL Sbjct: 119 LPLNAVVGTSSLRRESQLRANRPDLQIRVLRGNVNTRLAKLDAGNYDAIILASSGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ + P+ GQGA+ IE +++ + + +++ +NH D+ D V ERA L Sbjct: 179 FEARIRNCMPDTLSLPAVGQGALGIECRLDDQELRAMLEPLNHTDSADRVKAERALNTRL 238 Query: 241 DGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ IA +A + L+ G+V A DG + +R + +GR+ A+ + Sbjct: 239 NGGCQVPIAAYALLEDNDMLWLRGLVGAVDGSLIFRAEGRVHRSEGERLGRELAEDLLAQ 298 Query: 300 SNKNVF 305 V Sbjct: 299 GADKVL 304 >gi|221640136|ref|YP_002526398.1| porphobilinogen deaminase [Rhodobacter sphaeroides KD131] gi|221160917|gb|ACM01897.1| Porphobilinogen deaminase [Rhodobacter sphaeroides KD131] Length = 310 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 133/303 (43%), Positives = 183/303 (60%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGLF Sbjct: 7 PLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGLF 66 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE+ L+SG ID AVHS KDMPT +GL + YLPRED RD FI+ L DL Sbjct: 67 TREIEEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFAEGGLADLPQG 126 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK +V Sbjct: 127 ATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMNEV 186 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + E+ + QGAI IE ++P+AQE++ I+ T + ER+FL +LDGSC Sbjct: 187 PRVPIEPEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVPTGHRLAAERSFLLKLDGSC 246 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A +G L+ G +L DG G DA +G + A + + + Sbjct: 247 ETPIAGLAILEGDQLWLRGEILRPDGSESISGEIRGAIADAAALGSELASELLGRAPADF 306 Query: 305 FNF 307 F++ Sbjct: 307 FSW 309 >gi|146305321|ref|YP_001185786.1| porphobilinogen deaminase [Pseudomonas mendocina ymp] gi|145573522|gb|ABP83054.1| hydroxymethylbilane synthase [Pseudomonas mendocina ymp] Length = 312 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 109/302 (36%), Positives = 163/302 (53%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGGKGL Sbjct: 3 REIRIATRKSALALWQAEYVKARLEQAH--PGLLVSLVPMVSRGDKLLDAPLAKIGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL L Sbjct: 61 FVKELETALLENEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTYDSLDALPA 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL + Sbjct: 121 GSVVGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFQD 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ ++ ED P+ GQGA+ IE + + L+ ++H +T V ERA L+G Sbjct: 181 RIRSSISAEDSLPAGGQGAVGIECRSADAEIHALLAPLHHRETALRVTAERALNKRLNGG 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ IA +A + L+ G+V DG + DA +G A+ + + Sbjct: 241 CQVPIACYALLENDQLWLRGLVGQPDGGLLLRAEHRAASSDAEALGVRVAEALLAQGAEA 300 Query: 304 VF 305 + Sbjct: 301 IL 302 >gi|90023307|ref|YP_529134.1| hydroxymethylbilane synthase [Saccharophagus degradans 2-40] gi|89952907|gb|ABD82922.1| hydroxymethylbilane synthase [Saccharophagus degradans 2-40] Length = 308 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 109/303 (35%), Positives = 170/303 (56%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR S LAL A + ++ L ++ P + + PL ++GD+I + L ++GGKG Sbjct: 1 MKKIRIATRKSELALWQANDVKAKLEALY--PSLEVELFPLVSRGDKILDVPLAKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L++ E D AVHS KD+P + +GL+++ L RED RD ++S ++L L Sbjct: 59 LFVKELEHALLADEADIAVHSMKDVPMEFPEGLELAVILEREDPRDAWVSAGYENLDALP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 V+GTSSLRR++ +L R DI+V RG + TRL KL+ + AI+LA AG+KRLK Sbjct: 119 AGGVVGTSSLRRQSQILARRPDITVKFLRGNVNTRLAKLDAGEYDAIILAAAGLKRLKFG 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I+ L+ E+ P+ GQGA+ IE + + +L++ ++H T + V ERA L+G Sbjct: 179 DRIRSYLSPEESLPAGGQGAVGIECRSADSETLKLLQALHHTITAEQVLAERAMNRRLEG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I FA + + L+ G+V DG G D +G + A+ + Sbjct: 239 GCQVPIGCFAVHQNNQLWLRGLVADPDGSKVIYDEMTGAAADGEKMGVELAEKLLAAGAD 298 Query: 303 NVF 305 + Sbjct: 299 KIL 301 >gi|332559141|ref|ZP_08413463.1| porphobilinogen deaminase [Rhodobacter sphaeroides WS8N] gi|332276853|gb|EGJ22168.1| porphobilinogen deaminase [Rhodobacter sphaeroides WS8N] Length = 310 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 133/303 (43%), Positives = 184/303 (60%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGLF Sbjct: 7 PLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGLF 66 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE+ L+SG ID AVHS KDMPT +GL + YLPRED RD FI+ L DL Sbjct: 67 TREIEEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFADGGLADLPQG 126 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK ++V Sbjct: 127 ATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMDEV 186 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + E+ + QGAI IE ++P+AQE++ I+ T + ER+FL +LDGSC Sbjct: 187 PRVPIEPEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVRTGHRLAAERSFLLKLDGSC 246 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A +G L+ G +L DG G DA +G + A + + + Sbjct: 247 ETPIAGLAILEGDQLWLRGEILRPDGSESISGEIRGAIADAAALGSELASELLGRAPADF 306 Query: 305 FNF 307 F++ Sbjct: 307 FSW 309 >gi|301155139|emb|CBW14603.1| hydroxymethylbilane synthase [Haemophilus parainfluenzae T3T1] Length = 310 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 106/302 (35%), Positives = 164/302 (54%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K +I TR SPLAL A + L H P ++ ++P+ TKGD I + L +IGGKGL Sbjct: 5 KTLKIATRQSPLALWQANFVKDQLEKFH--PTLSVELVPMVTKGDVILDSPLAKIGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L+ D AVHS KD+P + +GL +S RED RD F+S+T +SL +L Sbjct: 63 FVKELENALLEKRADIAVHSMKDVPMEFPEGLGLSVICKREDPRDAFVSNTYRSLDELPQ 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+ L + R D+ + RG + TRL+KL+N++ AI+LA AG+ RL + Sbjct: 123 GAIVGTSSLRRQCQLKQLRPDLDIRSLRGNVGTRLSKLDNSEYDAIILASAGLIRLGLAE 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + +E P+ GQGA+ IE V++ + + L+ ++ T V ERA L G Sbjct: 183 RIASFIEVEQSLPAAGQGAVGIECRVDDEEVKALLAPLSDATTTTCVLAERAMNTRLQGG 242 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I G+A + ++ +V +DG +A +G A+ + Sbjct: 243 CQVPIGGYAIEQNGEIFLRALVGEADGSAIIRAEGKSAVENAEALGVTIAEQLLAQGADK 302 Query: 304 VF 305 + Sbjct: 303 IL 304 >gi|284053907|ref|ZP_06384117.1| porphobilinogen deaminase [Arthrospira platensis str. Paraca] Length = 322 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 105/307 (34%), Positives = 160/307 (52%), Gaps = 5/307 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + RI +R S LAL + + L + P + +ST+GD+I + L +IG K Sbjct: 8 QTRTIRIASRKSQLALVQTYWVQEELQK--RFPDIKFEVHTMSTQGDKILDVALAKIGDK 65 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118 GLFT+E+E +++ + D AVHS KD+PT L +GL + RED D + +H + L Sbjct: 66 GLFTKELEVGMLNHDTDMAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVHENHRDKQL 125 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L +V+GTSSLRR A L + D RG + TRL KL+ + AI+LA AG+KR Sbjct: 126 DTLPPGAVVGTSSLRRLAQLRHNFPHLEFKDIRGNLNTRLQKLDEGQYDAIILAVAGLKR 185 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L I +++ E + GQGA+ IE + + E+VK + H T + ERAFL Sbjct: 186 LGMADRIHQVIPAEISLHAVGQGALGIECREGDTEILEVVKALEHTATAQRCHSERAFLR 245 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 EL+G C+ I +G L G+V + DGK + + G DA +G + A ++ Sbjct: 246 ELEGGCQVPIGVNTMVEGDRLTLTGMVASLDGKRLIKDTVTGQASDAEQLGIELANQLKQ 305 Query: 299 ISNKNVF 305 + + Sbjct: 306 QGAEEIL 312 >gi|152997593|ref|YP_001342428.1| porphobilinogen deaminase [Marinomonas sp. MWYL1] gi|150838517|gb|ABR72493.1| porphobilinogen deaminase [Marinomonas sp. MWYL1] Length = 326 Score = 270 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 110/304 (36%), Positives = 169/304 (55%), Gaps = 2/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR S LAL A ++ L ++ P + ++ ++TKGD+I + L++IGGKG Sbjct: 19 KDKIVIATRESQLALWQANNIKAQLESLY--PDMKVELLGMTTKGDQILDSPLSKIGGKG 76 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L G D AVHS KD+P +GL ++ RED D F+S+ +SL L Sbjct: 77 LFVKELENALTEGLADIAVHSMKDVPMAFPEGLGLAVICEREDPHDAFVSNKVESLDQLP 136 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR L R D+ + D RG + TRL K+++ + AI+LA AG+ RL+ Sbjct: 137 SGAIVGTSSLRRSCQLRMKRPDLIIKDLRGNVNTRLKKMDDGEYDAIILATAGLVRLEML 196 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I++ + E P+ GQGA+ IE ++ + L+ + HE+T V ERA L+G Sbjct: 197 DRIRQRIPAETSLPAGGQGAMGIECRSDDIQTINLLAPLQHEETAIRVTAERAVNERLNG 256 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C++ IA FA + TL+ G+V + DGK E G++ DA ++G A + Sbjct: 257 GCQAPIACFAILENDTLWLRGLVGSPDGKTMIEGEIRGHKDDAKSLGVQLADDLLARGAD 316 Query: 303 NVFN 306 + N Sbjct: 317 IILN 320 >gi|118592006|ref|ZP_01549400.1| porphobilinogen deaminase [Stappia aggregata IAM 12614] gi|118435302|gb|EAV41949.1| porphobilinogen deaminase [Stappia aggregata IAM 12614] Length = 303 Score = 270 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 143/299 (47%), Positives = 195/299 (65%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LALA A ETR LM H + + I+ + T GDRI +R L+E+GGKGLFT Sbjct: 1 MRIGTRGSALALAQAHETRDRLMAAHGLAEDSFEIVVIKTSGDRIQDRPLSEVGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G ID AVHS+KDMPT L GL ++A+LPRED+RD F+S A++L DL + Sbjct: 61 KEIEEALLDGRIDLAVHSSKDMPTVLPDGLALTAFLPREDVRDAFLSPKAKTLTDLPHGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+G+SSLRR+A++ R R DI V+ +RG ++TRL KL A LLA AG++RL E I Sbjct: 121 VVGSSSLRRQAMIKRLRPDIEVVMYRGNLQTRLRKLAEGAVDATLLAAAGLRRLGLEAEI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +L + F P+ GQGAICIE+ ++ E++ I+ E T ++ ERAFLA LDGSC+ Sbjct: 181 TSLLETDQFLPAVGQGAICIESRADDTATLEMLAAIHDEATQIRLDAERAFLAVLDGSCR 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I G A G TL+F GIVL DG HE + +G + DA+ IGR + ++ + Sbjct: 241 TPIGGLATLDGDTLHFRGIVLKPDGSEVHEATASGLKSDAVQIGRSVGEDLKSCMGPDF 299 >gi|126463094|ref|YP_001044208.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17029] gi|126104758|gb|ABN77436.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17029] Length = 322 Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 133/303 (43%), Positives = 183/303 (60%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGLF Sbjct: 19 PLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGLF 78 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE+ L+SG ID AVHS KDMPT +GL + YLPRED RD FI+ L DL Sbjct: 79 TREIEEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFAEGGLADLPQG 138 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK +V Sbjct: 139 ATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMNEV 198 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + E+ + QGAI IE ++P+AQE++ I+ T + ER+FL +LDGSC Sbjct: 199 PRVPIEPEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVPTGHRLAAERSFLLKLDGSC 258 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A +G L+ G +L DG G DA +G + A + + + Sbjct: 259 ETPIAGLAILEGDQLWLRGEILRPDGSESISGEIRGAIADAAALGVELASELLGRAPADF 318 Query: 305 FNF 307 F++ Sbjct: 319 FSW 321 >gi|116750623|ref|YP_847310.1| porphobilinogen deaminase [Syntrophobacter fumaroxidans MPOB] gi|158512355|sp|A0LN73|HEM3_SYNFM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|116699687|gb|ABK18875.1| hydroxymethylbilane synthase [Syntrophobacter fumaroxidans MPOB] Length = 309 Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 171/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RIGTR S LAL + ++++ + P + + + T GD+I + L ++GG Sbjct: 1 MTDRVIRIGTRGSMLALKQSGNVKAAMEAL--WPGLRVELQVVRTTGDKILDVPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE L++ +D AVHS KD+P L +GL+I A RED RDV ++ T + + D Sbjct: 59 KGLFVKEIEDALLARTVDLAVHSMKDVPAILPEGLEIGAIPKREDPRDVIVTRTGKGIAD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR + + + R DI + + RG IETRL KL AI+LA AG+ R+ Sbjct: 119 LPMGGRVGTSSLRRASQIRKLRPDIEIANLRGNIETRLRKLTEGAFDAIILAAAGLHRMG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + L+ DF P+ GQGAI IE ++ + +EL+ ++ DT +V ER+ L L Sbjct: 179 WQNRVTSYLDPADFLPAIGQGAIGIELRCDDGEVRELLAPLHDPDTHVAVEAERSLLRTL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I G A+ TL G+V + DG+ SR G+ A IGRD + Sbjct: 239 EGGCQVPIGGHAHLVDGTLTLSGMVASIDGEELFRASRAGSPAQARKIGRDVGMELLDSG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 ARRILE 304 >gi|325272336|ref|ZP_08138739.1| porphobilinogen deaminase [Pseudomonas sp. TJI-51] gi|324102530|gb|EGB99973.1| porphobilinogen deaminase [Pseudomonas sp. TJI-51] Length = 313 Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAH--PELRVTLVPMVSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+ SL+ Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNHFASLEA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + L+ ++H DT D V ERA L Sbjct: 179 FEDRITATISVDDSLPAGGQGAVGIECRSADHAIHALLAPLHHHDTADRVVAERAMNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V G R A +G + A+++ Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRATAEALGVEVAEHLLGQG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AEAIL 303 >gi|189423573|ref|YP_001950750.1| porphobilinogen deaminase [Geobacter lovleyi SZ] gi|238058916|sp|B3E2H7|HEM3_GEOLS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189419832|gb|ACD94230.1| porphobilinogen deaminase [Geobacter lovleyi SZ] Length = 312 Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 115/306 (37%), Positives = 171/306 (55%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A T+S L + P + ++ + T GD+I + L ++GG Sbjct: 1 MAPKRLRIGTRASQLALWQANWTKSELEARY--PGIQVELVKIKTMGDKILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD FIS + Sbjct: 59 KGLFVKEIEEAMLRGEIDLAVHSMKDVPTEFPEGLGLVVTTKREDPRDAFISDKVTFS-E 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A LL+ R D+ ++ RG +ETR+ KL + A++LA AG+ RL Sbjct: 118 LRQGARIGTSALRRQAQLLKARPDLEMVIIRGNVETRIRKLKEDNLDAVILAAAGLNRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V+ E+L+ + P+ GQGA+ +E +++ E + +NH DT +V ERA L Sbjct: 178 FTDVVTELLDTDFSIPAIGQGALGLECRLDDNATIEALAFLNHADTAAAVAAERALLKRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA G TL G + + DGK +G+ DA+ +G + A + Sbjct: 238 EGGCQVPIAAHGTVSGDTLTLVGFIASVDGKQTVRDRISGSTADAVKLGTELADRLLAAG 297 Query: 301 NKNVFN 306 K + Sbjct: 298 GKAILE 303 >gi|197116806|ref|YP_002137233.1| porphobilinogen deaminase [Geobacter bemidjiensis Bem] gi|226706286|sp|B5EBG8|HEM3_GEOBB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|197086166|gb|ACH37437.1| hydroxymethylbilane synthase [Geobacter bemidjiensis Bem] Length = 318 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 165/305 (54%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A +S L + P + + + T GD+I + L ++GG Sbjct: 1 MALKELRIGTRASQLALWQANWVKSELEKRY--PDMTVTLTKIKTIGDKILDVPLAQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ GEID AVHS KD+PT+ +GL + RED RD IS+ + D Sbjct: 59 KGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISNGVKFA-D 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A LL+ R D+ ++ RG ++TR++KL A++LA AG+ RL Sbjct: 118 LPQGARIGTSALRRQAQLLKVRPDLEMVIIRGNVQTRMDKLKTEGLDAVILAAAGLNRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E+L + P+ GQGA+ IE +++N ++ + N DT +V ERA L Sbjct: 178 FADQITEMLPTDLSLPAIGQGALGIECNLSNQDVKDAISFFNSPDTSRAVRAERALLWRC 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA F G L G + + DGK+ + G D +G A+ + Sbjct: 238 EGGCQVPIAAFGEVTGDQLKLTGFIASVDGKVSVKGVVTGPADDCEKLGVKLAEQLLSEG 297 Query: 301 NKNVF 305 + Sbjct: 298 GHAIL 302 >gi|149204076|ref|ZP_01881044.1| porphobilinogen deaminase [Roseovarius sp. TM1035] gi|149142518|gb|EDM30563.1| porphobilinogen deaminase [Roseovarius sp. TM1035] Length = 315 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 133/303 (43%), Positives = 184/303 (60%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR SPLALA AFETR+ L +P I+ + T GD+I +R L EIGGKGLF Sbjct: 11 PLKIGTRGSPLALAQAFETRARLGAAFDLPEEAFEIVVIKTTGDQIIDRPLKEIGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE+ +++G+ID AVHS KDMP +GL + YLPRED+RD F+S T SL DL Sbjct: 71 TREIEQAMLTGDIDIAVHSMKDMPVLQPEGLLLDTYLPREDVRDAFVSPTVASLADLPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S++GTSSLRRKA +L + V++FRG ++TRL KL + A LA AG+ RL + +V Sbjct: 131 SLVGTSSLRRKAQVLVAYPHLEVVEFRGNVQTRLKKLEDGVAACTFLAMAGLNRLGRSEV 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ + P+ QGAI IE ++ +A E++ I+H++T + ERAFLA LDGSC Sbjct: 191 ATCAIDADVMLPAVAQGAIGIERRADDTRAAEMLAAIHHKETGQRLVSERAFLAALDGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A GSTL G +L DG ++ D +GR A + + Sbjct: 251 ETPIAGLAELNGSTLRLRGEILRPDGSESLTDDQSAPIEDGAELGRAMAAKLLAQAGPGF 310 Query: 305 FNF 307 F++ Sbjct: 311 FDW 313 >gi|326796191|ref|YP_004314011.1| porphobilinogen deaminase [Marinomonas mediterranea MMB-1] gi|326546955|gb|ADZ92175.1| Porphobilinogen deaminase [Marinomonas mediterranea MMB-1] Length = 308 Score = 269 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 168/305 (55%), Gaps = 2/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K I TR S LAL A + L ++ P + ++ ++TKGD+I + L++IGGK Sbjct: 1 MKDKIVIATRESKLALWQANTVKKQLETLY--PNLTVELLGMTTKGDQILDSPLSKIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L+ G D AVHS KD+P KGL ++ RED D F+S+ SL +L Sbjct: 59 GLFVKELESALLDGRADIAVHSMKDVPMAFPKGLGLAVICEREDPSDAFVSNKYSSLDEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SV+GTSSLRR + + R D+ + RG + TRL KL+NN+ AI+LA AG+ RL+ Sbjct: 119 PKGSVLGTSSLRRACQIQQHRPDLKIESLRGNVGTRLGKLDNNEYDAIILATAGLIRLEL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E IK L+ P+ GQGA+ IE N+ EL+ + H+DT+ V ERA L+ Sbjct: 179 EDRIKSRLSDTYCLPAGGQGAMGIECRDNDKDILELLAPLQHQDTYYRVTAERAVNKRLN 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C++ IA FA ++ G+V ++DG+ G +A +G A+ + Sbjct: 239 GGCQAPIACFATLSDGEIWLRGLVGSTDGQQMITGDIKGAPQNAEQLGITLAEDLLNRGA 298 Query: 302 KNVFN 306 + + + Sbjct: 299 QRILD 303 >gi|86359485|ref|YP_471377.1| porphobilinogen deaminase [Rhizobium etli CFN 42] gi|86283587|gb|ABC92650.1| porphobilinogen deaminase protein [Rhizobium etli CFN 42] Length = 309 Score = 269 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 166/306 (54%), Positives = 216/306 (70%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A E R LM H + I+ L+TKGDRIT+R L EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHNLSEEMFEIVVLTTKGDRITDRPLAEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E+KL+SGE+D AVHSAKDMPT L GL +SAYLPREDIRD + TA L D Sbjct: 61 KGLFTEELEQKLVSGELDFAVHSAKDMPTHLPDGLHLSAYLPREDIRDAVVGRTAPKLID 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R DI+VI FRG +ETRL KL+ + A LLA AG+KRL Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVITFRGSVETRLRKLDEGQVDATLLALAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K +VI ++L+ + FPP+P QGAICIE+ V + K +L+ +N T+DSV+CERAFLA L Sbjct: 181 KVEVITDVLDPDTFPPAPAQGAICIESRVGDTKIDDLLAAVNDATTFDSVSCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R + Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300 Query: 301 NKNVFN 306 F+ Sbjct: 301 GSAFFD 306 >gi|329898164|ref|ZP_08272361.1| Porphobilinogen deaminase [gamma proteobacterium IMCC3088] gi|328920873|gb|EGG28310.1| Porphobilinogen deaminase [gamma proteobacterium IMCC3088] Length = 307 Score = 269 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 106/301 (35%), Positives = 162/301 (53%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR SPLAL A + +L H P + ++ ++++GD++ + L +IGGKGLF Sbjct: 3 KIVIATRESPLALWQAHYVKDALEMAH--PGLAVELLGMTSRGDQLLDSPLAKIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L+ G D AVHS KD+P +GL + RE D F+S+T +S+ L Sbjct: 61 VKELETALLEGRADIAVHSMKDVPMSFPEGLCLGPICEREAPNDAFVSNTYESIDALPKG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +++GTSSLRR+ L +R D+ V RG + TRL KL++ + AI+LA AG+ E Sbjct: 121 AIVGTSSLRRECQLRSYRPDLVVNFLRGNVNTRLAKLDDGQYDAIILAAAGLILFGFEDR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ L E P+ GQGA+ IE ++ ++L++V++H T V ERA L+G C Sbjct: 181 IRSRLTPEQSLPAGGQGAVGIELRSDDEPTRDLIQVLHHPKTAAEVTAERALNQTLNGGC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + IA F +G TL+ G+V A DG G DA +G+ A + + + Sbjct: 241 QVPIAAFCVTEGDTLWLRGLVGAVDGSSILRAEARGKVEDAEVLGQQVANELLNQGAEAI 300 Query: 305 F 305 Sbjct: 301 L 301 >gi|85705298|ref|ZP_01036397.1| porphobilinogen deaminase [Roseovarius sp. 217] gi|85670171|gb|EAQ25033.1| porphobilinogen deaminase [Roseovarius sp. 217] Length = 315 Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 134/313 (42%), Positives = 186/313 (59%), Gaps = 6/313 (1%) Query: 1 MEKK------PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT 54 M + P +IGTR SPLALA AFETR+ L +P I+ + T GD+I +R Sbjct: 1 MTRNLPTPSHPLKIGTRGSPLALAQAFETRARLGAAFDLPEEVFEIVVIKTTGDQIIDRP 60 Query: 55 LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT 114 L EIGGKGLFT EIE+ L++GEID AVHS KDMP +GL + YLPRED+RD F+S Sbjct: 61 LKEIGGKGLFTREIEQALLTGEIDIAVHSMKDMPVLQPEGLLLDTYLPREDVRDAFVSPL 120 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 SL DL +++GTSSLRRKA +L + V++FRG ++TRL KL + A LA A Sbjct: 121 VGSLADLPAGALVGTSSLRRKAQVLVAYPHLQVVEFRGNVQTRLKKLADGVATCTFLAMA 180 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G+ RL + +V ++ E P+ QGAI IE ++ +A E++ I+H++T + ER Sbjct: 181 GLNRLGRSEVATGAIDPEVMLPAVAQGAIGIERRADDTRAAEMLAAIHHKETGQRLVSER 240 Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 AFLA LDGSC++ IAG A G+TL G +L DG ++ D ++GR A Sbjct: 241 AFLAALDGSCETPIAGLAELNGNTLRLRGEILRPDGSESLTDDQSAPIEDGADLGRAMAA 300 Query: 295 YIRFISNKNVFNF 307 + + F++ Sbjct: 301 KLLAQAGPGFFDW 313 >gi|328541997|ref|YP_004302106.1| Porphobilinogen deaminase [polymorphum gilvum SL003B-26A1] gi|326411747|gb|ADZ68810.1| Porphobilinogen deaminase [Polymorphum gilvum SL003B-26A1] Length = 302 Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats. Identities = 143/300 (47%), Positives = 193/300 (64%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LALA A ETR+ LM H + I+ + T GDRI +R L+E+GGKGLFT Sbjct: 1 MRIGTRGSALALAQAHETRARLMAAHGLAEDAFEIVVIKTSGDRILDRPLSEVGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ ID AVHS+KDMPT L GL ++A+LPRED+RD F+S A+ L DL + Sbjct: 61 KEIEEALLDDRIDLAVHSSKDMPTLLPDGLALTAFLPREDVRDAFVSPKAKMLMDLPQGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+G+SSLRR+A++ R R DI V+ +RG ++TRL KL + A LLAYAG++RL V+ Sbjct: 121 VVGSSSLRRQAMIKRLRPDIEVVMYRGNVQTRLQKLEDGAVDATLLAYAGLRRLGLADVV 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +L+ + F P+ GQGAICIE+ V + L+ I+ +T + ERAFLAELDGSC+ Sbjct: 181 TSLLDTDAFLPAVGQGAICIESRVEDAATLGLLAAIHDRETEIRLTAERAFLAELDGSCR 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + I G A G L GI+L DG HE++R G DA IGR+A + ++ F Sbjct: 241 TPIGGLARIDGDRLSLAGIILRPDGSEAHEIAREGAVADAEAIGREAGRTLKAAGGPGFF 300 >gi|163782608|ref|ZP_02177605.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1] gi|159882181|gb|EDP75688.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1] Length = 303 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 111/300 (37%), Positives = 165/300 (55%), Gaps = 5/300 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A +S L + ++ ++T GD+I + L +IGGKGLF Sbjct: 3 VRIGTRKSKLALWQANFVKSFLEKKW---GVEVELVKITTTGDKILDSPLAKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G ID AVHS KD+P + +GL + A RE+ DV +S L +L + Sbjct: 60 KEIEQALMEGRIDLAVHSLKDVPMVIPEGLTLGAITEREEPHDVLLSRDGGKLLELREGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+ L R R D+ V RG ++TR+ KL AI+LAYAG+KR+ E + Sbjct: 120 KVGTSSLRRQVQLKRLRRDLEVEVLRGNVDTRVRKLKEGMYDAIILAYAGVKRMGYEDEV 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+ ++ F P+ GQG++ IE + + L++ +NH ++ CERAFL L+G C+ Sbjct: 180 TEV--LDYFIPAVGQGSLAIEIREGDEETLRLIEPLNHPESRVRAECERAFLRRLEGGCQ 237 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 I FA KG+TL G + +G F E G +A +G A+ + + + Sbjct: 238 VPIGAFAQVKGNTLTVRGFISDLEGLKFIEGEEVGKPEEASELGERLAESLLQQGGERIL 297 >gi|75910970|ref|YP_325266.1| porphobilinogen deaminase [Anabaena variabilis ATCC 29413] gi|75704695|gb|ABA24371.1| hydroxymethylbilane synthase [Anabaena variabilis ATCC 29413] Length = 336 Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats. Identities = 110/307 (35%), Positives = 165/307 (53%), Gaps = 5/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++ RIG+R S LAL + R L + P N + +ST+GD+I + L +IG KG Sbjct: 22 RRTIRIGSRKSQLALVQTYWVREQLQ--NSFPDINFEVHTMSTQGDKILDVALAKIGDKG 79 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 LFT+E+E +I+ EID AVHS KD+PT L +GL ++A RE+ D + H + + Sbjct: 80 LFTKELEVGMINEEIDFAVHSLKDLPTNLPEGLALAAITERENPADALVVHENFKDKQID 139 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +VIGTSSLRR A L ++ D RG + TRL KL+ + ++LA AG++RL Sbjct: 140 TLPAGAVIGTSSLRRLAQLRNQFPHLTFKDVRGNLNTRLAKLDAGEYDGLILAAAGLQRL 199 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I ++L E + GQGA+ IE N+ + ++K I H T D ER+FL Sbjct: 200 GMGDRIHQVLPKEVSLHAVGQGALGIECRANDAELITILKAIEHPQTRDRCLAERSFLRS 259 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I G L G+V + DG+ + + +G+ DA IG A+ +R Sbjct: 260 LEGGCQVPIGVNTEINGDELILTGVVASVDGQNLVKDTVSGDASDAEAIGIRLAELLREQ 319 Query: 300 SNKNVFN 306 + + N Sbjct: 320 GAQEILN 326 >gi|83952840|ref|ZP_00961570.1| porphobilinogen deaminase [Roseovarius nubinhibens ISM] gi|83835975|gb|EAP75274.1| porphobilinogen deaminase [Roseovarius nubinhibens ISM] Length = 304 Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats. Identities = 131/302 (43%), Positives = 183/302 (60%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR SPLALA A+ETR L+ +P I+ ++T GDR+ +R L EIGGKGLFT Sbjct: 1 MKIGTRGSPLALAQAYETRDRLVAAFDLPETAFEIVIITTTGDRVIDRPLKEIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EIE L++G+ID AVHS KDMP +GL I YLPRED+RD FI T ++L ++A + Sbjct: 61 REIEDALLTGDIDLAVHSMKDMPVLQPEGLIIDCYLPREDVRDAFICPTGRNLSEMAPGT 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G+SSLRR+A +L + V++FRG ++TRL KL+ A LA AG+ RLK+ +VI Sbjct: 121 KVGSSSLRRRAQVLVAHPQLEVVEFRGNVQTRLRKLDEGVAACTFLAMAGLNRLKRTEVI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L E+ P+ QGAI IE ++ A +++ I+H T + ERAFLA LDGSC+ Sbjct: 181 TRALEPEEMLPAVAQGAIGIERRRDDSGAAMMLEAIHHGPTGQRLAAERAFLAALDGSCE 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG A +G TL G +L DG R+ D +GR A + + + F Sbjct: 241 TPIAGLAELQGGTLRLRGEILRPDGSERLCDDRSAPVEDGAELGRAMAVDLLAQAGPDFF 300 Query: 306 NF 307 ++ Sbjct: 301 DW 302 >gi|15605804|ref|NP_213181.1| porphobilinogen deaminase [Aquifex aeolicus VF5] gi|2982966|gb|AAC06580.1| porphobilinogen deaminase [Aquifex aeolicus VF5] Length = 323 Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats. Identities = 113/301 (37%), Positives = 171/301 (56%), Gaps = 5/301 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL A + L + ++ ++T GD+IT+ L +IGGKGLF Sbjct: 21 KIRIGTRKSKLALWQANYVKDFLEKHW---GVEVELVKITTTGDKITDVPLAKIGGKGLF 77 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIEK L+ G ID AVHS KD+P + KGL++ A RE+ DV IS + + L +L Sbjct: 78 VKEIEKALLEGSIDLAVHSLKDVPMVIPKGLKLGAITKRENPYDVLISRSGKKLYELPSG 137 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SVIGTSSLRR+ + + R D+ V RG ++TR+ KL A++LAYAG+KR+ E Sbjct: 138 SVIGTSSLRRQVQIKKRRRDLKVEVLRGNVDTRMRKLKEGLYDAVILAYAGVKRMGYESE 197 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E+ +EDF P+ GQG++ IE + + +EL+K +N+E+++ ER FL L+G C Sbjct: 198 ITEV--LEDFIPAVGQGSLAIEIREGDKRIEELIKPLNNEESFLCAIAERTFLRRLEGGC 255 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + + FA + TL + + + + E R GN +A +G A+ + + + Sbjct: 256 QVPVGAFAKIENGTLKMKAFISDIEAERYIEGYREGNPEEAEKLGLSLAEELLKKGGEEI 315 Query: 305 F 305 Sbjct: 316 L 316 >gi|262370151|ref|ZP_06063478.1| porphobilinogen deaminase [Acinetobacter johnsonii SH046] gi|262315190|gb|EEY96230.1| porphobilinogen deaminase [Acinetobacter johnsonii SH046] Length = 306 Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats. Identities = 112/303 (36%), Positives = 168/303 (55%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +I TR SPLAL A R+ L +H + ++ T+GD+I + L +IGGKG Sbjct: 1 MKTLKIATRQSPLALWQAEHIRARLEALHA--GLTVELVTFVTQGDKILDTPLAKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S++ S L Sbjct: 59 LFVKELEAALLDGRADLAVHSMKDVPMALPEGLSLAVICEREDPLDAFVSNSYVSFDALP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRRK +L+ R D+ +ID RG + TRL+KL+ + AI+LA AG+KRL Sbjct: 119 QGAKVGTSSLRRKCQILKQRPDLDIIDLRGNVGTRLSKLDAGQYDAIILASAGLKRLGLA 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I + E P+ GQGA+ +E N+ +L+ + H DT V ERAF A L+G Sbjct: 179 ERICHTIRPELSLPAVGQGALGLECRANDQAVLDLIHPLLHIDTDTCVRAERAFNAYLEG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+A + + G V + DG+ + G+ +A ++G AQ + Sbjct: 239 GCQVPIAGYATLADNRIQLEGRVGSVDGQTLLKAQVAGDAAEAEHLGVVLAQELLAQGAG 298 Query: 303 NVF 305 ++ Sbjct: 299 DLL 301 >gi|110635531|ref|YP_675739.1| porphobilinogen deaminase [Mesorhizobium sp. BNC1] gi|110286515|gb|ABG64574.1| hydroxymethylbilane synthase [Chelativorans sp. BNC1] Length = 309 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 153/306 (50%), Positives = 203/306 (66%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ +IGTR S LALA A ETR+ LM H +P I+ + T GDRI +R L+E GG Sbjct: 1 MQTDVIKIGTRGSALALAQAAETRARLMVAHGLPEDAFEIVVIRTSGDRIQDRPLSEAGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+ G ID AVHS+KDMPT L GL++SA+L RED+RDVFI A+ L+D Sbjct: 61 KGLFTKEIEEALLEGRIDLAVHSSKDMPTFLPDGLELSAFLEREDVRDVFIGRAAKRLED 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+AL LR R D+ V FRG ++TRL KL + A LLA AG+KRLK Sbjct: 121 LPHGANLGTSSLRRQALALRLRPDLKVGVFRGNVQTRLRKLEDGAADGTLLALAGLKRLK 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E V E+++ FPP+ GQGAICIE+ + + +LV+ I+H T +++CERAFLA L Sbjct: 181 LEHVATELMDPVIFPPALGQGAICIESRTGDTRIAKLVEAIHHPATGFALSCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ +AG A G + F G++L DG+ HE+ +G DA IGRDA + IR + Sbjct: 241 DGSCRTPMAGLATVDGDRIAFSGMILTPDGREVHEIGGDGAAQDAAEIGRDAGRRIRQKA 300 Query: 301 NKNVFN 306 F Sbjct: 301 GAGFFE 306 >gi|238897905|ref|YP_002923584.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259647800|sp|C4K4E3|HEM3_HAMD5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|229465662|gb|ACQ67436.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 309 Score = 268 bits (684), Expect = 9e-70, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M R+ TR SPLAL A ++ L H P ++++P+ T+GD I L++ GG Sbjct: 1 MSNNMIRLATRQSPLALWQAHYVKTGLEFFH--PDLKVILLPMVTQGDNILGTALSKTGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ ++ D AVHS KDMP +GL + A RED RD F+S + Sbjct: 59 KGLFVKELERAVLDNRADIAVHSIKDMPLYFPEGLGLVAVCEREDPRDAFLSLRYHDVAQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L + I V D RG + RL KL+ AI+LA AG+KRL Sbjct: 119 LPEGSVVGTSSLRRQCQLYKNYPGIVVRDLRGNVGARLKKLDQGDYDAIVLAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E + +IL E P+ GQGAI IE +++ + V +NH + ++CERA L L Sbjct: 179 LENRMTQILRPETSLPAAGQGAIGIECRLDDTVTLQRVATLNHRPSQLKISCERALLKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C++ I +A + L+ V A DG++ + R GN A IG + A + Sbjct: 239 EGGCQTPIGSYAEIENDELWLRAFVGAPDGQLIIDGERRGNFDSAEKIGFELANELLSRG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AEAIL 303 >gi|163737211|ref|ZP_02144629.1| porphobilinogen deaminase [Phaeobacter gallaeciensis BS107] gi|161389815|gb|EDQ14166.1| porphobilinogen deaminase [Phaeobacter gallaeciensis BS107] Length = 320 Score = 268 bits (684), Expect = 9e-70, Method: Composition-based stats. Identities = 128/307 (41%), Positives = 180/307 (58%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A ETR+ L+ +P I+ + T GD ++ L E+GG Sbjct: 12 PLKIGTRGSPLALAQAHETRARLVAAFDLPQDAFEIVVIKTSGDNQALIAADKPLKELGG 71 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+SG ID AVHS KDMP GL + YLPRED+RD F+S ++ D Sbjct: 72 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVAQPAGLLLDTYLPREDVRDAFVSPDVTAITD 131 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG+ RL Sbjct: 132 LRAGAVVGTSSLRRRAQLLHRRPDLQVVEFRGNVQTRLTKLRDGVAECTFLAMAGLNRLG 191 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++V + ED P+ QGAI IE ++ + +++ ++ +T + + ERAFLA L Sbjct: 192 ADQVPATPIPPEDMLPAVAQGAIGIERRADDSRTGDMLAALHDRETGERLAAERAFLAAL 251 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A +G TL G VL DG + D +GR+ A + + Sbjct: 252 DGSCETPIAGLATLEGRTLRLRGEVLRPDGSEAISDEQTCPVEDGAELGREMAAKLLAQA 311 Query: 301 NKNVFNF 307 F++ Sbjct: 312 GAGFFDW 318 >gi|84500376|ref|ZP_00998625.1| porphobilinogen deaminase [Oceanicola batsensis HTCC2597] gi|84391329|gb|EAQ03661.1| porphobilinogen deaminase [Oceanicola batsensis HTCC2597] Length = 315 Score = 268 bits (684), Expect = 9e-70, Method: Composition-based stats. Identities = 127/304 (41%), Positives = 177/304 (58%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P +IGTR SPLALA A E R L +PP + + T GDR+ +R L EIGGKGL Sbjct: 10 RPLKIGTRGSPLALAQAHEARDRLAHAFDLPPEAFEVCVIQTTGDRVQDRPLKEIGGKGL 69 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT EIE L++G ID AVHS KDMP +GL + YLPRED RD F+S+ + L + Sbjct: 70 FTREIEHALLTGGIDIAVHSMKDMPVLQPEGLLLDCYLPREDPRDAFVSNLYERLDQIPA 129 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRR+A +L R D+ V++FRG ++TRL KL + A A LA AG+ RL + Sbjct: 130 GARVGTSSLRRRAQVLVRRPDLEVVEFRGNVQTRLRKLADGVASATFLAMAGLNRLDRAS 189 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + + L ++ P+ QGAI IE ++ L++ I+ +T + ERAFLA LDGS Sbjct: 190 IARSALATDEMLPAVAQGAIGIERREDDHATAALLEAIHDPETARQLAAERAFLAALDGS 249 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C++ IAG A +G TL G +L DG + R+ D +GR+ + + Sbjct: 250 CETPIAGLADLEGGTLRLRGEILRPDGSEALKDDRSAPVEDGAKLGREMGAALLAQAGDG 309 Query: 304 VFNF 307 F+F Sbjct: 310 FFDF 313 >gi|121535332|ref|ZP_01667145.1| porphobilinogen deaminase [Thermosinus carboxydivorans Nor1] gi|121306118|gb|EAX47047.1| porphobilinogen deaminase [Thermosinus carboxydivorans Nor1] Length = 317 Score = 268 bits (684), Expect = 9e-70, Method: Composition-based stats. Identities = 117/304 (38%), Positives = 167/304 (54%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K IGTR S LAL A L H P + I + T GD+I + L +IGGK Sbjct: 1 MKNKLVIGTRGSKLALWQANYIAHRLCQYH--PGLEVTIKHIVTTGDKILDVPLAKIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT+EIE ++ GEID AVHS KDMPT+L GL ++A RE+ D IS +L L Sbjct: 59 GVFTKEIELAMLRGEIDLAVHSLKDMPTELPPGLTLAAITEREEPFDALISPKYGTLDKL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSSLRR+A LL R D++V D RG ++TRL KL + AI+LA AG+KRL Sbjct: 119 PHGAKVGTSSLRRRAQLLNCRPDLTVCDLRGNVDTRLRKLETEELDAIVLAQAGLKRLGW 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I + L + P+ GQGA+ +ET ++ + LV ++ EDT +V ER+FL EL+ Sbjct: 179 DDRITQQLPPDICLPAVGQGALALETRSDDSEVLALVAFLHDEDTAAAVTAERSFLNELE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I + + L +L+ DG + G A ++GR AQ++ Sbjct: 239 GGCQVPIGVYGRVENGELVLDAAILSLDGAAALKDRICGAPAAAEDLGRKLAQHMYVTGG 298 Query: 302 KNVF 305 + + Sbjct: 299 REIL 302 >gi|56476047|ref|YP_157636.1| porphobilinogen deaminase [Aromatoleum aromaticum EbN1] gi|56312090|emb|CAI06735.1| Porphobilinogen deaminase [Aromatoleum aromaticum EbN1] Length = 314 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 101/300 (33%), Positives = 153/300 (51%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A ++ L ++ P + ++ ++T+GD+I +R L ++GGKGLF Sbjct: 13 LVIATRESRLALWQAEHVKARLEALY--PGCRVELLGMTTRGDQILDRPLAKVGGKGLFV 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ D AVHS KD+P +L + + RE D F+S SL D+ + Sbjct: 71 KELEAALLEERADIAVHSMKDVPMQLAEPFALPCISAREVPLDAFVSPRYASLADMPPGT 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR++ L ++V RG ++TRL KL+ + AI+LA AG++RL I Sbjct: 131 VVGTSSLRRESQLHAQFPFLAVTSLRGNLDTRLRKLDEGQYDAIILAAAGLRRLGLADRI 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE + +N DT V ERA L GSC+ Sbjct: 191 RAELPSEVSLPAAGQGALGIECLAKRTDIAAWLAPLNDADTSACVRAERAVARALAGSCE 250 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + +A + L+ G V DG R G+ DA +G A +R +++ Sbjct: 251 VPLGAYAEIRAGRLWLRGFVALPDGSRMVRAEREGDAADAEGLGLALADDLRAQGAEDIL 310 >gi|50083560|ref|YP_045070.1| porphobilinogen deaminase [Acinetobacter sp. ADP1] gi|55976395|sp|Q6FFA9|HEM3_ACIAD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|49529536|emb|CAG67248.1| porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Acinetobacter sp. ADP1] Length = 311 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 115/303 (37%), Positives = 166/303 (54%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +I TR SPLAL A R L ++ P + ++ T+GD+I + L +IGGKG Sbjct: 6 MQTLKIATRQSPLALWQAEHIRDRLQALY--PELKVELVKFVTQGDKILDTPLAKIGGKG 63 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ G D AVHS KD+P L +GL ++ RED D F+S+ S L Sbjct: 64 LFVKELEAALLDGRADLAVHSMKDVPMHLPEGLSLAVICEREDPLDAFVSNHVMSFDQLP 123 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 L + +GTSSLRRK +L+ R D+ +ID RG + TRL KL++ + AI+LA AG+KRL Sbjct: 124 LGARVGTSSLRRKCQILKQRPDLEIIDLRGNVGTRLAKLDDGQYDAIVLASAGLKRLGLI 183 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I+ +N E P+ GQGA+ +E N+ K +L+ + H+ T V ERAF A L+G Sbjct: 184 SRIRHSINAEISLPAVGQGALGLECRANDKKILDLIAPLAHQPTSACVRAERAFNAYLEG 243 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAGFA L G V + DGK + G+ A +G A+ + Sbjct: 244 GCQVPIAGFATLTQECLTLEGRVGSVDGKTLLKDHVEGHADQAEVLGVQLAKQLLAQGAG 303 Query: 303 NVF 305 + Sbjct: 304 ELL 306 >gi|170719443|ref|YP_001747131.1| porphobilinogen deaminase [Pseudomonas putida W619] gi|229836111|sp|B1J1V2|HEM3_PSEPW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|169757446|gb|ACA70762.1| porphobilinogen deaminase [Pseudomonas putida W619] Length = 313 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L +IGG Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+ SL Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNRFSSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L Sbjct: 179 FEERITASISVDDSLPAGGQGAVGIECRSADSEIHALLAPLHHTDTADRVVAERALNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V G R A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGEQLWLRGLVGQPSGGTLLMADARAPRASAETLGVQVAEDLLGQG 298 Query: 301 NKNVF 305 + Sbjct: 299 AAAIL 303 >gi|332284596|ref|YP_004416507.1| porphobilinogen deaminase [Pusillimonas sp. T7-7] gi|330428549|gb|AEC19883.1| porphobilinogen deaminase [Pusillimonas sp. T7-7] Length = 315 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 109/302 (36%), Positives = 161/302 (53%), Gaps = 2/302 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LAL A R L ++ P + ++ ++T+GD+I +R+L+++GGKGLF Sbjct: 7 KLVIATRASRLALWQAEHVRDRLQTLY--PQCQVSLLTMTTRGDQILDRSLSKVGGKGLF 64 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L+ G D AVHS KD+P + +S L R+D RD F+S+ SL DL Sbjct: 65 VKELETALLDGRADLAVHSLKDVPVDMQSPFALSVILERDDPRDAFVSNDYSSLDDLPAG 124 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SV+GTSSLRR+A + + + V RG ++TRL KL+ AI+LA AG++RL E Sbjct: 125 SVVGTSSLRREAQIRQRYPQLQVQPLRGNLDTRLGKLDRGDYAAIILASAGLRRLGLEAR 184 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ LN E P+ GQGA+ IE + Q + ++ DT ERA L GSC Sbjct: 185 IRSHLNPEQSLPAAGQGALGIEILESRSDMQTWLAPLSDPDTTACALAERAVSRVLGGSC 244 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A FA G+TL G+V DG +G+ A +G A + + + Sbjct: 245 QVPLAAFAQRDGNTLMVRGLVAEPDGSRIIRAQVSGDVSQAEELGVRIANELLEEGARII 304 Query: 305 FN 306 + Sbjct: 305 LD 306 >gi|87118400|ref|ZP_01074299.1| porphobilinogen deaminase [Marinomonas sp. MED121] gi|86166034|gb|EAQ67300.1| porphobilinogen deaminase [Marinomonas sp. MED121] Length = 308 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 112/304 (36%), Positives = 170/304 (55%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K I TR S LAL A + SL ++ P + ++ ++TKGD+I N L++IGGK Sbjct: 1 MKDKIIIATRESQLALWQANNVKDSLAALY--PDIQVELLGMTTKGDQILNSPLSKIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L+ G D AVHS KD+P +GL ++ RED D F+S+ +L L Sbjct: 59 GLFVKELEHALLDGRADIAVHSMKDVPMAFPEGLGLAVICEREDPTDAFVSNKYDNLASL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSSLRR + L R D+ + D RG + TRL KL+N + AI+LA AG+ RL+ Sbjct: 119 PQGAVVGTSSLRRSSQLALARPDLVIKDLRGNVNTRLRKLDNQEYDAIILATAGLMRLEM 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 IKE ++ +D P+ GQGA+ IE ++ +L+ + H++T+ V ERA L+ Sbjct: 179 TDRIKERISDQDSLPAGGQGAMGIECRSDDADMIKLLAPLQHQETYYRVTAERAVNERLN 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C++ IA F+ +G LY G+V + DG G++ DA +G A+ + Sbjct: 239 GGCQAPIAAFSLLEGDELYLRGLVGSVDGSTILRDEIRGSKNDAHALGVQLAEKLIAAGA 298 Query: 302 KNVF 305 + Sbjct: 299 DTLL 302 >gi|17229370|ref|NP_485918.1| porphobilinogen deaminase [Nostoc sp. PCC 7120] gi|17130968|dbj|BAB73577.1| porphobilinogen deaminase [Nostoc sp. PCC 7120] Length = 336 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 110/307 (35%), Positives = 167/307 (54%), Gaps = 5/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++ RIG+R S LAL + R L + P N + +ST+GD+I + L +IG KG Sbjct: 22 RRTIRIGSRKSQLALVQTYWVREQLQ--NSFPDINFEVHTMSTQGDKILDVALAKIGDKG 79 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 LFT+E+E +I+ EID AVHS KD+PT L +GL ++A RE+ D + H + + Sbjct: 80 LFTKELEVGMINEEIDFAVHSLKDLPTNLPEGLALAAITERENPADALVVHENFKDKQID 139 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +VIGTSSLRR A L ++ D RG + TRL KL+ + ++LA AG++RL Sbjct: 140 TLPAGAVIGTSSLRRLAQLRNQFPHLTFKDVRGNLNTRLAKLDAGEYDGLILAAAGLQRL 199 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + +IL E + GQGA+ IE ++ + ++K I H +T D ER+FL Sbjct: 200 GMGDRVHQILPKEISLHAVGQGALGIECRADDAELITVLKAIEHPETRDRCLAERSFLRS 259 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I G+ L G+V + DG+ + + +GN DA IG A+ +R Sbjct: 260 LEGGCQVPIGVNTEINGNELILTGVVASVDGQNLVKDTVSGNASDAEAIGIRLAELLREQ 319 Query: 300 SNKNVFN 306 + + N Sbjct: 320 GAQEILN 326 >gi|77464252|ref|YP_353756.1| porphobilinogen deaminase [Rhodobacter sphaeroides 2.4.1] gi|77388670|gb|ABA79855.1| Porphobilinogen deaminase [Rhodobacter sphaeroides 2.4.1] Length = 314 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 133/303 (43%), Positives = 183/303 (60%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGLF Sbjct: 11 PLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE+ L+SG ID AVHS KDMPT +GL + YLPRED RD FI+ L DL Sbjct: 71 TREIEEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFAEGGLADLPQG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK +V Sbjct: 131 ATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMNEV 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + E+ + QGAI IE ++P+AQE++ I+ T + ER+FL +LDGSC Sbjct: 191 PRVPIESEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVPTGHRLAAERSFLLKLDGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A +G L+ G +L DG G DA +G + A + + + Sbjct: 251 ETPIAGLAILEGDQLWLRGEILRPDGSESISGEIRGAIADAAALGSELASELLGRAPADF 310 Query: 305 FNF 307 F++ Sbjct: 311 FSW 313 >gi|77920653|ref|YP_358468.1| porphobilinogen deaminase [Pelobacter carbinolicus DSM 2380] gi|123756552|sp|Q3A009|HEM3_PELCD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|77546736|gb|ABA90298.1| hydroxymethylbilane synthase [Pelobacter carbinolicus DSM 2380] Length = 315 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR S LAL A + L +H P ++V++P++TKGD+I + L ++GG Sbjct: 1 MSSSALRIGTRASRLALWQAEWVQQQLETLH--PGLSVVLVPITTKGDKILDVPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L G ID AVHS KD+P+ L GL + PRED RD ++ +S Sbjct: 59 KGLFVKEIEEALYDGSIDLAVHSMKDVPSVLPPGLILPCIPPREDPRDALVTPDGRSFAQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTS+LRR+A LL R D+ ++ RG +ETRL K+ I+LA AG+KRL+ Sbjct: 119 LPQGARIGTSALRRQAQLLHRRPDLDIVSLRGNVETRLRKMEEEDMDGIVLAAAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I E L+++ P+ GQGA+ +E + + EL+ ++ DT +V ERAFL L Sbjct: 179 LAERIAEYLSVDVSLPAIGQGALGLECREGDDRTLELIAPLHDADTAVAVRAERAFLRRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ +A A TL G+V DG + + A +G A+ + Sbjct: 239 NGGCQVPLAAHATVAEQTLTMVGLVAEVDGGSLIKETLAAPVAQAEAVGCQLAETLLARG 298 Query: 301 NKNVF 305 + Sbjct: 299 ADRIL 303 >gi|206889552|ref|YP_002248559.1| porphobilinogen deaminase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741490|gb|ACI20547.1| porphobilinogen deaminase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 311 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 176/306 (57%), Gaps = 3/306 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++ IG+R S LA+ A + L ++ P + I + T GD+I + L +IGGK Sbjct: 4 KRNKIVIGSRGSKLAMWQANWVKDKLQTLY--PELKVEIEKIKTTGDKILDAPLAKIGGK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +EIE+ L+S +D AVHS KD+PT++ +GLQISA RED RD FIS L +L Sbjct: 62 GLFVKEIEEALLSKRVDLAVHSMKDVPTEIPEGLQISAICEREDPRDAFISKDGVLLNEL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSSLRR L R+D+ + RG ++TR+ KL + + AI+LA AG+KR+ Sbjct: 122 PQEAVLGTSSLRRTVQLKALRNDLVIKPLRGNVDTRIRKLKDGEFQAIVLAMAGVKRMGV 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E ++ + + + P+ GQGAI IET V++ EL+K +NHE+T + ERAFL+ + Sbjct: 182 ENLVTQAFSEDLMIPAIGQGAIGIETRVDDDFVNELIKPLNHEETAICILAERAFLSVMG 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGK-IFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ +A A ++L G++ +GK + R G+ A ++G + A + Sbjct: 242 GGCQVPLACHARIVNNSLKIVGMIGDPEGKMPVIKGFREGSLSQAQSLGVELANELLHRG 301 Query: 301 NKNVFN 306 K + Sbjct: 302 GKEILE 307 >gi|119475318|ref|ZP_01615671.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2143] gi|119451521|gb|EAW32754.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2143] Length = 313 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 110/308 (35%), Positives = 170/308 (55%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A ++ L H P ++ ++ ++T+GD++ + L +IGG Sbjct: 1 MPSNLVRIATRESPLALWQAEFIKAGLQAAH--PGLDVELLGMTTRGDKMLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL++S RED RD F+S+ +++ + Sbjct: 59 KGLFVKELETAMLEGRADIAVHSMKDVPMEFPEGLELSIICEREDPRDAFVSNHFKTVNE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L S +GTSSLRR+ L R D+++ID RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPLGSRVGTSSLRRQCQLRALRPDLNIIDLRGNVNTRLRKLDEGQYDAIILASAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I + + ++ P+ GQGA+ +E ++ + Q L+ +NH T V+ ERA L Sbjct: 179 MEQRIADPIAVDSSLPAGGQGAVGVEARSDDHRIQALLAPLNHRSTALRVSAERAMNLRL 238 Query: 241 DGSCKSAIAGFAYCK---GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 G C+ IA FA L G+V + DGK R A +G + A + Sbjct: 239 QGGCQVPIACFAELDIEGSGQLRLRGLVGSPDGKEILRCERQAKPEMAEALGIEVADNLL 298 Query: 298 FISNKNVF 305 + + Sbjct: 299 AQGAERIL 306 >gi|163740378|ref|ZP_02147772.1| porphobilinogen deaminase [Phaeobacter gallaeciensis 2.10] gi|161386236|gb|EDQ10611.1| porphobilinogen deaminase [Phaeobacter gallaeciensis 2.10] Length = 320 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 128/307 (41%), Positives = 180/307 (58%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A ETR+ L+ +P I+ + T GD ++ L E+GG Sbjct: 12 PLKIGTRGSPLALAQAHETRARLVAAFDLPQDAFEIVVIKTSGDNQALIAADKPLKELGG 71 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+SG ID AVHS KDMP GL + YLPRED+RD F+S ++ D Sbjct: 72 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVAQPAGLLLDTYLPREDVRDAFVSPDVTAITD 131 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG+ RL Sbjct: 132 LRAGAVVGTSSLRRRAQLLHRRPDLQVVEFRGNVQTRLTKLRDGVAECTFLAMAGLNRLG 191 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++V + ED P+ QGAI IE ++ + +++ ++ +T + + ERAFLA L Sbjct: 192 ADQVPATPIPPEDMLPAVAQGAIGIERRADDSRTGDMLAALHDRETGERLAAERAFLAAL 251 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A +G TL G VL DG + D +GR+ A + + Sbjct: 252 DGSCETPIAGLATLEGRTLRLRGEVLRPDGSEAISDEQTCPVEDGAELGREMATKLLAQA 311 Query: 301 NKNVFNF 307 F++ Sbjct: 312 GAGFFDW 318 >gi|190893753|ref|YP_001980295.1| porphobilinogen deaminase [Rhizobium etli CIAT 652] gi|190699032|gb|ACE93117.1| porphobilinogen deaminase protein [Rhizobium etli CIAT 652] Length = 309 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 166/306 (54%), Positives = 217/306 (70%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A E R LM H +P I+ LSTKGDRIT+R+L EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEEMFEIVVLSTKGDRITDRSLAEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E+KL+SGE+D AVHSAKDMPT L GL +SAYLPREDIRD I TA L D Sbjct: 61 KGLFTEELEQKLVSGELDFAVHSAKDMPTHLPDGLHLSAYLPREDIRDAVIGRTAPKLID 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R DI+VI FRG +ETRL KL + A LLA AG+KRL Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVIIFRGSVETRLRKLEEGQVDATLLALAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K +V+ +IL+ + FPP+P QGAICIE+ + + + +L+ +N T+D+V+CERAFLA L Sbjct: 181 KVEVLTDILDPDTFPPAPAQGAICIESRIGDSRIDDLLAAVNDAATFDTVSCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R + Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300 Query: 301 NKNVFN 306 F+ Sbjct: 301 GSAFFD 306 >gi|113478006|ref|YP_724067.1| porphobilinogen deaminase [Trichodesmium erythraeum IMS101] gi|110169054|gb|ABG53594.1| hydroxymethylbilane synthase [Trichodesmium erythraeum IMS101] Length = 320 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 155/305 (50%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIG+R S LAL + + L P + +ST+GD+I + L +IG KGLF Sbjct: 9 TIRIGSRKSQLALIQTYWVQEKLEK--NFPNITFEVHKMSTQGDKILDVALAKIGDKGLF 66 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDL 121 T+E+E ++ E D AVHS KD+PT L +GL + RE+ D + H + L+ L Sbjct: 67 TKELELGMLQNETDLAVHSLKDLPTNLPEGLILGCVTERENPADALVLHEKLKDKQLETL 126 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +VIGTSSLRR A L + D RG + TRL KL+ + A++LA+AG+ RL Sbjct: 127 PEGAVIGTSSLRRLAQLRYHFPHLEFKDVRGNLNTRLAKLDAGEYDALILAFAGLHRLGM 186 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I +I+ E + GQGA+ IE + L+K + H T ERAFL EL+ Sbjct: 187 SDRIHQIIPPEISLHAVGQGALGIECRAGDNNILNLLKSLEHTATAQRCYAERAFLRELE 246 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I +G L G+V + DGK + G DA IG + AQ +R Sbjct: 247 GGCQVPIGVNTQIEGEQLTLTGLVASLDGKKLVKDIVTGATADAEQIGIELAQKLRKQGA 306 Query: 302 KNVFN 306 + + + Sbjct: 307 QEILD 311 >gi|300866645|ref|ZP_07111332.1| porphobilinogen deaminase [Oscillatoria sp. PCC 6506] gi|300335354|emb|CBN56492.1| porphobilinogen deaminase [Oscillatoria sp. PCC 6506] Length = 323 Score = 267 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 107/307 (34%), Positives = 160/307 (52%), Gaps = 5/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIG+R S LAL + + L + P + +ST+GD+I + L +IG KG Sbjct: 9 TRTVRIGSRKSQLALVQTYWVQEQLQQ--RFPQCTFEVHTMSTQGDKILDVPLAKIGDKG 66 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119 LFT+E+E ++S E D AVHS KD+PT L +GL + RE+ D + +H + L+ Sbjct: 67 LFTKELEVGMLSNETDFAVHSLKDLPTNLPEGLILGCVSERENPADALVVHANHQDKQLE 126 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +VIGTSSLRR A L + D RG + TRL KL+ + AI+LA AG++RL Sbjct: 127 TLPPGAVIGTSSLRRLAQLRHHFPHLEFKDIRGNLNTRLAKLDEGEYDAIILAVAGLQRL 186 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + +I++ E + GQGA+ IE + EL+K + H +T ERAFL E Sbjct: 187 GMGDRVHQIISPEISLHAVGQGALGIECRAGDDDILELIKALEHTETAQRCYAERAFLRE 246 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I +G L G+V + DG+ + + G A +G D A +R Sbjct: 247 LEGGCQVPIGVNTKIEGDQLTLTGLVASLDGQRLIKDTVTGAAATAELLGIDLAHRLRQQ 306 Query: 300 SNKNVFN 306 + + Sbjct: 307 GAQEILE 313 >gi|296132653|ref|YP_003639900.1| porphobilinogen deaminase [Thermincola sp. JR] gi|296031231|gb|ADG81999.1| porphobilinogen deaminase [Thermincola potens JR] Length = 310 Score = 267 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 106/302 (35%), Positives = 162/302 (53%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +GTR S LA+ +L ++ P + I+ + T+GD+I + L +IG KGL Sbjct: 3 REIVVGTRDSALAMWQTNWVVDNLRKLN--PDYTFKIVSMKTQGDKILDVALAKIGDKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E ++ EID AVHS KD+PT L +GL+I A R D RDV ++ LKD+ Sbjct: 61 FTKELEFAMLRNEIDLAVHSMKDLPTVLPEGLKIGAICERHDPRDVLVARDGILLKDMPQ 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSSLRR A LL++R D+ +I RG + TR+ KL I+LA AGI+RL Sbjct: 121 GARIGTSSLRRTAQLLKYRPDLQIISLRGNLNTRMAKLERENLDGIILAAAGIERLGWAY 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + E P+ GQG+I IE + + +V +NH + ++ ERA L +L+G Sbjct: 181 RITQRIPFEVCLPAVGQGSIGIEIREGDEEVSRIVDKLNHGPSAAAITAERAMLKKLEGG 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I +G L G+V + DGK G +A ++G A+ + + Sbjct: 241 CQIPIGALGRVEGDRLTLEGVVASLDGKELLRSRVEGPASEAASLGVALAEKLLDMGALE 300 Query: 304 VF 305 + Sbjct: 301 IL 302 >gi|146276603|ref|YP_001166762.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17025] gi|145554844|gb|ABP69457.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17025] Length = 322 Score = 267 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 130/303 (42%), Positives = 183/303 (60%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR SPLALA A+ETRS L +P I+ + T GD++ +R L EIGGKGLF Sbjct: 19 PLKIGTRGSPLALAQAYETRSRLSAAFSLPEEAFEIVVIKTTGDKVLDRPLKEIGGKGLF 78 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE+ L+ G ID AVHS KDMPT +GL + YLPRED RD FI++ L DL Sbjct: 79 TREIEEALLDGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITYAEGGLADLPQG 138 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G+SSLRR+A LL R D+ V++FRG ++TRL KLN+ A LA AG+ RLK + V Sbjct: 139 ATVGSSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMDDV 198 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + E+ + QGAI IE +++P+ QE++ I+ T + ER+FL +LDGSC Sbjct: 199 PRVAIEPEEMLSAVAQGAIGIERRIDDPRTQEMLAAIHDVPTGHRLAAERSFLLKLDGSC 258 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A +G ++ G +L DG G DA +G + A + + + Sbjct: 259 ETPIAGLAVLEGDQIWLRGEILRPDGSESISGEIRGGIPDAAALGAELASELLGRAPSDF 318 Query: 305 FNF 307 F++ Sbjct: 319 FSW 321 >gi|24211755|sp|Q8YVU6|HEM3_ANASP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 323 Score = 267 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 110/307 (35%), Positives = 167/307 (54%), Gaps = 5/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++ RIG+R S LAL + R L + P N + +ST+GD+I + L +IG KG Sbjct: 9 RRTIRIGSRKSQLALVQTYWVREQLQ--NSFPDINFEVHTMSTQGDKILDVALAKIGDKG 66 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 LFT+E+E +I+ EID AVHS KD+PT L +GL ++A RE+ D + H + + Sbjct: 67 LFTKELEVGMINEEIDFAVHSLKDLPTNLPEGLALAAITERENPADALVVHENFKDKQID 126 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +VIGTSSLRR A L ++ D RG + TRL KL+ + ++LA AG++RL Sbjct: 127 TLPAGAVIGTSSLRRLAQLRNQFPHLTFKDVRGNLNTRLAKLDAGEYDGLILAAAGLQRL 186 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + +IL E + GQGA+ IE ++ + ++K I H +T D ER+FL Sbjct: 187 GMGDRVHQILPKEISLHAVGQGALGIECRADDAELITVLKAIEHPETRDRCLAERSFLRS 246 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I G+ L G+V + DG+ + + +GN DA IG A+ +R Sbjct: 247 LEGGCQVPIGVNTEINGNELILTGVVASVDGQNLVKDTVSGNASDAEAIGIRLAELLREQ 306 Query: 300 SNKNVFN 306 + + N Sbjct: 307 GAQEILN 313 >gi|220904556|ref|YP_002479868.1| porphobilinogen deaminase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868855|gb|ACL49190.1| porphobilinogen deaminase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 310 Score = 267 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 115/306 (37%), Positives = 159/306 (51%), Gaps = 3/306 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + I TR S LAL A +S L + P I + + TKGD I + L ++GGK Sbjct: 1 MRNTLTIATRGSRLALWQAEHVKSCLQAIR--PGLEIRLNVIKTKGDIILDVPLAKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +EIE+ L++GE D AVHS KD+P +L +GL + PRED D +SH S+ L Sbjct: 59 GLFVKEIEEALLNGEADLAVHSMKDVPMELPEGLILGCVPPREDPTDCLLSHKYDSVAAL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++ +GTSSLRR++ LL R D+ + RG ++TRL KL AI+LA AG+KRL Sbjct: 119 PPNACVGTSSLRRQSQLLAQRPDLRIESLRGNVDTRLRKLQEGMYDAIILASAGLKRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 L+ F P+ GQGA+ IE N+ + L+ + T V ER FLA L+ Sbjct: 179 SAPHMHALDPHTFLPAVGQGALGIECRENDYELFTLLAEMEDSATRVCVEAERGFLAGLE 238 Query: 242 GSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG A TL G+V DG S++G+ A G + A I Sbjct: 239 GGCQVPIAGHARLLDDDTLRLEGLVAEVDGSRILRCSKDGHTSQARRWGLELAGEILEQG 298 Query: 301 NKNVFN 306 K + Sbjct: 299 GKGILE 304 >gi|224370660|ref|YP_002604824.1| HemC [Desulfobacterium autotrophicum HRM2] gi|223693377|gb|ACN16660.1| HemC [Desulfobacterium autotrophicum HRM2] Length = 325 Score = 267 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 161/305 (52%), Gaps = 2/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK +IGTR S LAL A + + D + P + I+ + T GD I +R L+ +GGK Sbjct: 19 MKKTIKIGTRGSKLALWQANHVKDRIED--QFPETEVEIMTIKTTGDMIVDRPLSMVGGK 76 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +EIEK L+ ID AVHS KDMP +L GL I A RE+ DV IS+ SL DL Sbjct: 77 GLFVKEIEKALLESTIDMAVHSMKDMPGELPPGLVIGAVPARENPFDVLISNNNLSLADL 136 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSSLRR + + R DI RG ++TRL KL + A LLA AG+ RL Sbjct: 137 PKGARIGTSSLRRASQIKHARPDIETASIRGNLDTRLKKLAAGEFDATLLAAAGLIRLGM 196 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + VI + + P+ GQGA+CIE+ + ++ +NH +T V+ ERAFL LD Sbjct: 197 KTVITQYFDETIMIPAVGQGALCIESRQEDLDIAPVLAFLNHGETHTVVSGERAFLRRLD 256 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC +A F + + G+V + DG+ + + G D G A+ + Sbjct: 257 GSCHIPVACFGRLEDHRVILTGLVASEDGRTILKETVAGTPEDPQKAGIALAETLLSKGA 316 Query: 302 KNVFN 306 + Sbjct: 317 DKILE 321 >gi|163757401|ref|ZP_02164490.1| porphobilinogen deaminase [Hoeflea phototrophica DFL-43] gi|162284903|gb|EDQ35185.1| porphobilinogen deaminase [Hoeflea phototrophica DFL-43] Length = 312 Score = 267 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 159/305 (52%), Positives = 209/305 (68%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + KP+RIGTR SPLALA A ETR LM H +P I+ LSTKGDRIT+R L EIGGK Sbjct: 5 QMKPYRIGTRGSPLALAQAHETRERLMAAHDLPESAFEIVVLSTKGDRITDRPLAEIGGK 64 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFTEE+E++L G +D AVHS+KDMPT L +GL I YL RED RD +IS A L+DL Sbjct: 65 GLFTEELEEQLSDGRLDLAVHSSKDMPTALPEGLGIVTYLEREDPRDAYISSAAPRLEDL 124 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+G+SSLRR+AL+ R R DISVI FRG ++TRL KL + + HA +LA+AG+KRL K Sbjct: 125 PQKAVVGSSSLRRQALIRRLRPDISVITFRGLVDTRLRKLADGEVHATMLAFAGLKRLGK 184 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +V+ +++ E FPP+PGQGAICIE +++ + EL+ I+H DT ++NCER FL LD Sbjct: 185 SEVVTNLMDPESFPPAPGQGAICIEARLDDERIAELLAPIDHADTHAALNCERGFLGALD 244 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC++ IAG A + + FYG++L DG FH++ G DA +G DA +R + Sbjct: 245 GSCRTPIAGHATLENGQVSFYGMILTPDGTTFHDIRVQGPAADAAQLGADAGAEVRARAG 304 Query: 302 KNVFN 306 F Sbjct: 305 SKFFE 309 >gi|289207199|ref|YP_003459265.1| porphobilinogen deaminase [Thioalkalivibrio sp. K90mix] gi|288942830|gb|ADC70529.1| porphobilinogen deaminase [Thioalkalivibrio sp. K90mix] Length = 315 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 115/293 (39%), Positives = 161/293 (54%), Gaps = 2/293 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KP RI TR SPLA+ A + L +H P + ++ ++T+GDR+ + L IGGKG Sbjct: 1 MKPLRIATRKSPLAMWQAEHVAARLRGLH--PDLPVELVGMTTQGDRVLDSPLARIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E ++ D AVHS KD+P +L L + L RED D F+S+T + +L Sbjct: 59 LFVKELEVAMLEDRADIAVHSVKDVPMELPADLVLPVILDREDPLDAFVSNTYAHVDELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +G+SSLRR+ L R D+ + D RG + TRL KL+ + AILLA AG+KRL + Sbjct: 119 QGARVGSSSLRRQCQLRARRPDLKITDLRGNVNTRLGKLDAGEYDAILLAAAGLKRLGFD 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ L P+ GQGAI IE N+P+ L+ +N DT D V ERAF L+G Sbjct: 179 ERIRARLEPAVSLPAVGQGAIAIECRENDPEIAALIAPLNDRDTSDRVRAERAFNRRLEG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 C+ +AG A G L G+V A DG G R DA +G A+ Sbjct: 239 GCQVPLAGHATLDGDRLRLDGLVGAVDGSQLLRRQVEGPRGDAEALGVQLAEQ 291 >gi|78044433|ref|YP_360051.1| porphobilinogen deaminase [Carboxydothermus hydrogenoformans Z-2901] gi|123756773|sp|Q3ACT3|HEM3_CARHZ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|77996548|gb|ABB15447.1| porphobilinogen deaminase [Carboxydothermus hydrogenoformans Z-2901] Length = 311 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK +G+R S LAL L +H P N I+ + TKGD+I + L +IG K Sbjct: 1 MKKEVIVGSRDSALALWQTNWVVERLSKIH--PEINFKIVTMKTKGDKILDVALAKIGDK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT+E+E L++ ID AVHS KD+PT L +GL+I A+ RE DVFIS +L Sbjct: 59 GLFTKELEHALLNKTIDMAVHSMKDLPTVLPEGLKIGAFCEREYPGDVFISPKGFKFLEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSSLRR A +L R D+ I RG + TR K+ I+LAYAG+KRL Sbjct: 119 PQGARIGTSSLRRIAQILAVRPDLQAIPLRGNLPTRFRKMEEMDLDGIILAYAGVKRLGY 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I E+L+ + P+ GQG+I +E ++ +EL+K I+H T ++ ERAFL L+ Sbjct: 179 EDKITEMLSFDLCLPAVGQGSIGVEIRADDTFIEELLKPIDHFATNRAIRAERAFLKRLE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I ++ K + L+ G+V + DGK+ + + G+ + +G A+ + Sbjct: 239 GGCQIPIGAYSEVKENRLHLKGVVASLDGKLVIKGEKEGSIEEPEKVGISLAEELLTKGA 298 Query: 302 KNVFN 306 + + Sbjct: 299 QKILE 303 >gi|46201306|ref|ZP_00208053.1| COG0181: Porphobilinogen deaminase [Magnetospirillum magnetotacticum MS-1] Length = 315 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 134/310 (43%), Positives = 183/310 (59%), Gaps = 4/310 (1%) Query: 1 MEKK--PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLT 56 M K RIGTR SPLALA ETR L I I + T GD I +R L Sbjct: 1 MTAKLPILRIGTRGSPLALAQTHETRDRLAAAWAPLGQEGAIDIEVIKTTGDLIQDRPLA 60 Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116 EIGGKGLFT+E+++ ++SG I AVHS KD+PT L G+ + LPRED+RD FIS A Sbjct: 61 EIGGKGLFTKELDEAMLSGRIHLAVHSMKDVPTLLPDGIVLPCILPREDVRDAFISLKAA 120 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 SL DL +V+GTSSLRR A +L R D+ V++FRG ++TRL KL+ A +LA AG+ Sbjct: 121 SLADLPQGAVVGTSSLRRGAQILHRRPDLKVVNFRGNVQTRLRKLDEGVVDATMLAMAGL 180 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 +RL + L+ +D P+ QGAI I ++ A + +N D++ V ERAF Sbjct: 181 RRLGLAGHVTSALSEDDMLPAVAQGAIGITCRADDEAAHAFLAALNCPDSFVRVAAERAF 240 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L LDGSC++ IA A G L F G++++ DG H SR+G+R DA +G+DAA+ + Sbjct: 241 LTRLDGSCRTPIAALAVLDGDHLSFRGLIVSPDGTAIHATSRSGSRSDAEAMGKDAAEEL 300 Query: 297 RFISNKNVFN 306 ++ F+ Sbjct: 301 IKVAGPGFFD 310 >gi|74318586|ref|YP_316326.1| porphobilinogen deaminase [Thiobacillus denitrificans ATCC 25259] gi|123772872|sp|Q3SFT5|HEM3_THIDA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|74058081|gb|AAZ98521.1| porphobilinogen deaminase [Thiobacillus denitrificans ATCC 25259] Length = 306 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 112/302 (37%), Positives = 160/302 (52%), Gaps = 2/302 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R L ++H P + I+ ++T+GD+I + TL++IGGKGLF Sbjct: 3 TLTIASRESALAMWQAEHIRDRLRELH--PECKVNILGMTTRGDQILDVTLSKIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L +GE D AVHS KD+P +L G +++ RED RD F+S+ L DL Sbjct: 61 VKELEVALAAGEADLAVHSMKDVPMELPPGFELAVIGEREDPRDAFVSNRYARLSDLPPG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SV+GTSSLRR+A L ++V RG + TRL KL+ + AILLA AG+KRL Sbjct: 121 SVVGTSSLRREAQLRARYPHLTVKPLRGNVGTRLKKLDEGQFDAILLAAAGLKRLGLGAR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 IK +L++E+ P+ GQGA+ IE N ++ +N T V ER L GSC Sbjct: 181 IKSLLSVEESIPAAGQGALGIEIRSGNTAVAAMLAPLNDPVTAACVRAERQVSRVLGGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + + A K L G V DG F G+ D +G+ A + + V Sbjct: 241 QVPLGAHASYKDGRLLLEGFVAKPDGSRFLVDRAEGDASDPEAVGQALADKLLAQGARAV 300 Query: 305 FN 306 + Sbjct: 301 LD 302 >gi|85060344|ref|YP_456046.1| porphobilinogen deaminase [Sodalis glossinidius str. 'morsitans'] gi|84780864|dbj|BAE75641.1| porphobilinogen deaminase [Sodalis glossinidius str. 'morsitans'] Length = 320 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 154/305 (50%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ RI TR SPLAL A R L+ H P + ++PL T+GD + L ++GG Sbjct: 8 MQDNLLRITTRQSPLALWQAGYVRDELLRHH--PHLQVELVPLVTRGDITLDTPLAKVGG 65 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+ GL + R+D RD F+S +L Sbjct: 66 KGLFIKELELALLEHRADIAVHSMKDVTVSFPAGLGLCVLCERDDPRDAFVSPRYANLDV 125 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L R D+ V D RG + TRL KL+ A++LA AG+KRL Sbjct: 126 LPPGAIVGTSSLRRQCQLRERRPDVIVHDLRGNVGTRLAKLDRGNFDAVILAVAGLKRLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I+ ++ D P+ GQGA+ IE +++ + L+ ++H +T V ERA A L Sbjct: 186 LEDRIRHAIDPADSLPAVGQGAVGIECRLDDARTLALLAPLHHRETSLRVGAERAMNARL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A G ++ +V + DG A +G A + Sbjct: 246 QGGCQVPIGSYAVLDGEEIWLRALVGSPDGTTVIRSEGRAPLAQAEQLGLRLADDLLNRG 305 Query: 301 NKNVF 305 + + Sbjct: 306 ARAIL 310 >gi|77461708|ref|YP_351215.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf0-1] gi|123602840|sp|Q3K4T0|HEM3_PSEPF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|77385711|gb|ABA77224.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf0-1] Length = 313 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEAAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYSSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLTRRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L Sbjct: 179 FEDRITSAISVDDSLPAGGQGAVGIECRSADTEIHALLAPLHHADTADRVTAERALNKHL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V G R A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGEPSGGKLLNAQARAPRAAAETLGVQVAEDLLSQG 298 Query: 301 NKNVF 305 ++ Sbjct: 299 ADDIL 303 >gi|217969858|ref|YP_002355092.1| porphobilinogen deaminase [Thauera sp. MZ1T] gi|217507185|gb|ACK54196.1| porphobilinogen deaminase [Thauera sp. MZ1T] Length = 310 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 100/308 (32%), Positives = 155/308 (50%), Gaps = 5/308 (1%) Query: 1 MEK---KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57 M + + I TR S LAL A ++ L +H P + ++ ++T+GD+I +R L + Sbjct: 1 MSQSSPERIVIATRESRLALWQAEHIKARLEALH--PGCRVELLGMTTRGDQILDRPLAK 58 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 +GGKGLF +E+E L+ G D AVHS KD+P + + RE D F+S +S Sbjct: 59 VGGKGLFVKELETALLDGRADIAVHSMKDVPMVMEPEFALPCITAREVPLDAFVSSRYES 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L D+ +V+GTSSLRR++ + + V RG ++TRL KL+ + AI+LA AG+ Sbjct: 119 LADMPPGAVVGTSSLRRESQIHAQYPFLGVTSLRGNLDTRLRKLDEGQYDAIILAAAGLT 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL + I+ ++ E P+ GQGA+ IE ++ + DT V ERA Sbjct: 179 RLGLGERIRSVMPAEVSLPAAGQGALGIECLSARADVIGWLQPLVDADTTACVLAERAVA 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L GSC+ + +A + L+ G V DG R G +A +GR A +R Sbjct: 239 RALAGSCEVPLGAYAVMREGRLWLRGFVARPDGSTIVRAEREGAPAEAEALGRALADDLR 298 Query: 298 FISNKNVF 305 + + Sbjct: 299 AQGAEAIL 306 >gi|13473577|ref|NP_105145.1| porphobilinogen deaminase [Mesorhizobium loti MAFF303099] gi|23821698|sp|Q98EI7|HEM3_RHILO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|14024327|dbj|BAB50931.1| hydroxymethylbilane synthase [Mesorhizobium loti MAFF303099] Length = 308 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 143/306 (46%), Positives = 206/306 (67%), Gaps = 1/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ +IGTR SPLALA A ET++ LM H +P ++ +ST GDRI +R L+E GG Sbjct: 1 MQT-TLKIGTRGSPLALAQAHETQARLMAAHGLPAEAFEVVVISTSGDRIQDRPLSEAGG 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L++G ID AVHS+KDMPT+L GL++SA+LPRED RD F+ A+++ D Sbjct: 60 KGLFTKEIEEALLAGAIDIAVHSSKDMPTQLPDGLELSAFLPREDARDAFVGKAAKTIAD 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R D+ V+ FRG ++TRL KL+ A +LAYAG+KRL Sbjct: 120 LLRGAKVGSSSLRRQALIRRMRPDLDVVMFRGNVQTRLRKLDEGVAAGTILAYAGLKRLG 179 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E V +++ ++ FPP+PGQGAI IET + + ++++ I+ T ++ CERAFLA L Sbjct: 180 LEHVATDLMPLDIFPPAPGQGAIGIETRIGDRAVEKMLVAIHDVPTGQALACERAFLAAL 239 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A + L F G++++ DG H V G DA IG +AA+ +R + Sbjct: 240 DGSCRTPIAGHATIETGNLSFAGLIISPDGTQSHTVELQGPAQDAARIGDEAARTVRAKA 299 Query: 301 NKNVFN 306 + F+ Sbjct: 300 GEKFFD 305 >gi|209551271|ref|YP_002283188.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537027|gb|ACI56962.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 309 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 163/306 (53%), Positives = 217/306 (70%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A E R LM H +P I+ LSTKGDRIT+R+L EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEEMFEIVVLSTKGDRITDRSLAEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E++L +GE+D AVHSAKDMPTKL GL +SAYLPREDIRD I TA L D Sbjct: 61 KGLFTEELEQQLTTGELDFAVHSAKDMPTKLPDGLHLSAYLPREDIRDAVIGRTAPKLID 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R DI+V+ FRG +ETRL KL + A LLA AG+KRL Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVVTFRGLVETRLRKLEEGQVDATLLALAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K +V+ +IL+ + FPP+P QGAIC+E+ + + + +L+ +N T+D+V+CERAFLA L Sbjct: 181 KVEVLTDILDPDTFPPAPAQGAICLESRIGDTQIDDLLAPVNDAATFDTVSCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R + Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300 Query: 301 NKNVFN 306 F+ Sbjct: 301 GSAFFD 306 >gi|190575960|ref|YP_001973805.1| porphobilinogen deaminase [Stenotrophomonas maltophilia K279a] gi|229846305|sp|B2FI06|HEM3_STRMK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|190013882|emb|CAQ47520.1| putative porphobilinogen deaminase [Stenotrophomonas maltophilia K279a] Length = 303 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 160/306 (52%), Gaps = 4/306 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 ME RI TR SPLAL + L H P ++ ++P+ST+GD + +R+L IGG Sbjct: 1 ME--TVRIATRKSPLALWQSEHVADRLRQAH--PGLHVELVPMSTRGDEVLDRSLAAIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ GE DCAVHS KD+P +L + A L R D D F+S+ SL Sbjct: 57 KGLFLKELELAMLRGEADCAVHSLKDVPMELDPPFALPAMLTRHDPADGFVSNLYASLDA 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + + +GTSSLRR+A L R D+ ++D RG + TRL KL+N AI+LA AG++RL Sbjct: 117 LPIGARVGTSSLRRQAQLRALRPDLELLDLRGNVNTRLAKLDNGGYDAIVLAVAGLERLG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I L + P+P QGA+ +E N + L ++ T V ERA L Sbjct: 177 LGERIVARLQPPQWLPAPAQGAVAVECDGGNARLMALFAPLDDAATRACVEAERAMNRAL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC +A A +G L+ G+V ++ G D +G+ A+ + Sbjct: 237 HGSCHVPVAAIAQWQGDDLHLQGLVGSASDGRAVRAEAVGPANDPEGLGQRVAKLLLDDG 296 Query: 301 NKNVFN 306 + N Sbjct: 297 AGELLN 302 >gi|11467957|sp|O66621|HEM3_AQUAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 304 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 113/301 (37%), Positives = 171/301 (56%), Gaps = 5/301 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL A + L + ++ ++T GD+IT+ L +IGGKGLF Sbjct: 2 KIRIGTRKSKLALWQANYVKDFLEKHW---GVEVELVKITTTGDKITDVPLAKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIEK L+ G ID AVHS KD+P + KGL++ A RE+ DV IS + + L +L Sbjct: 59 VKEIEKALLEGSIDLAVHSLKDVPMVIPKGLKLGAITKRENPYDVLISRSGKKLYELPSG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SVIGTSSLRR+ + + R D+ V RG ++TR+ KL A++LAYAG+KR+ E Sbjct: 119 SVIGTSSLRRQVQIKKRRRDLKVEVLRGNVDTRMRKLKEGLYDAVILAYAGVKRMGYESE 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E+ +EDF P+ GQG++ IE + + +EL+K +N+E+++ ER FL L+G C Sbjct: 179 ITEV--LEDFIPAVGQGSLAIEIREGDKRIEELIKPLNNEESFLCAIAERTFLRRLEGGC 236 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + + FA + TL + + + + E R GN +A +G A+ + + + Sbjct: 237 QVPVGAFAKIENGTLKMKAFISDIEAERYIEGYREGNPEEAEKLGLSLAEELLKKGGEEI 296 Query: 305 F 305 Sbjct: 297 L 297 >gi|254447439|ref|ZP_05060905.1| porphobilinogen deaminase [gamma proteobacterium HTCC5015] gi|198262782|gb|EDY87061.1| porphobilinogen deaminase [gamma proteobacterium HTCC5015] Length = 313 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 168/305 (55%), Gaps = 4/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR SPLAL A + + L + P +I ++ ++TKGD+I + L +IGGKG Sbjct: 1 MKTLRIATRQSPLALWQAEDVAAKLKAHY--PDLDIELVKMTTKGDKILDTPLAKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMP--TKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 LF +E+E ++ G D AVHS KD+P ++ +GL +S L RED RD F+S+ SL + Sbjct: 59 LFIKELEVGMLEGRADIAVHSMKDVPVDSEFPEGLHLSVILEREDPRDAFVSNRYNSLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT+SLRR+ +L + RG + TRL KL++ + AI+LA AG+ RL Sbjct: 119 LPEGAVVGTASLRRQCQVLGRYPHLKTAVLRGSVGTRLGKLDDGQFDAIVLASAGLMRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I L E P+ GQGA+ IE ++ + +L+ + DT + ERA A L Sbjct: 179 LEERITAKLPPEISLPAIGQGAVGIECRKDDTELNKLLAPLADRDTTTRLKAERALNARL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A +G L G+V A DG + R G R A +IG A+ + Sbjct: 239 QGGCQVPIAGYAELEGDQLSMRGLVGAPDGSKLYTSERRGPRDQAADIGLAVAEDLLSQG 298 Query: 301 NKNVF 305 V Sbjct: 299 ANAVL 303 >gi|303247619|ref|ZP_07333890.1| porphobilinogen deaminase [Desulfovibrio fructosovorans JJ] gi|302491099|gb|EFL50993.1| porphobilinogen deaminase [Desulfovibrio fructosovorans JJ] Length = 310 Score = 266 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 161/305 (52%), Gaps = 2/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + I TR S LAL A + L + H P + ++P+ TKGDRI + L ++GGK Sbjct: 1 MRDKLVIATRGSKLALWQANHVAARLKEAH--PGLAVDLLPIKTKGDRILDVPLAKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +EIE+ L+ G D AVHS KD+P + GL + RED D+ +S L L Sbjct: 59 GLFVKEIEEALLDGRADLAVHSMKDVPAEQPAGLVVGITPKREDPCDMLLSVAYDGLDAL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSSLRRKA L R D++++D RG ++TR+ KL + AI++A AG+ RL Sbjct: 119 PEGAKVGTSSLRRKAQLTALRPDLAIVDLRGNLDTRVGKLTDGLFDAIVVARAGLNRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E L F P+ QGA+ IE ++ + ++ +H ++ D+V ERAFL L+ Sbjct: 179 SAPKSERLCPPRFLPAAAQGALGIEYRFDDRETAAMLAFFDHPESRDAVAAERAFLGRLE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ IA A G+ + G+V D G R DA+ +G+ A + + Sbjct: 239 GGCQVPIAAHAVIDGNLISIDGLVADPDTGRTFRDVATGKRDDAVELGKKLADSVLAMGA 298 Query: 302 KNVFN 306 + + + Sbjct: 299 RAILD 303 >gi|255020135|ref|ZP_05292205.1| Porphobilinogen deaminase [Acidithiobacillus caldus ATCC 51756] gi|254970428|gb|EET27920.1| Porphobilinogen deaminase [Acidithiobacillus caldus ATCC 51756] Length = 319 Score = 266 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 117/302 (38%), Positives = 170/302 (56%), Gaps = 4/302 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR SPLAL A R+ L+ H P + I+P++T+GDR+ L EIGGKGLF Sbjct: 17 PLRIGTRASPLALWQAEHVRAGLLRAH--PEIPVEIVPMTTQGDRMLAVPLHEIGGKGLF 74 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE L+ G +D AVHS KD+P + +GL+I+A L RED+RD ++S+T +DL Sbjct: 75 VKEIEAALLEGTVDLAVHSMKDVPAQQPEGLEIAAILAREDVRDAWVSNTFARPEDLPQG 134 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +G+SSLRR+A LL V+D RG + TRL KL+ I+LA AG+KRL + Sbjct: 135 GRVGSSSLRRRAQLLHRLPQTVVLDLRGNVATRLRKLDAGDYDGIVLAAAGLKRLGLLER 194 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ L E P+ GQGAI +E ++ + + L+K +N T V ER L G C Sbjct: 195 IRHYLEPELSLPAVGQGAIGVEIRSDDARTRTLLKPLNDPTTSRCVGAERHMNRLLGGDC 254 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A A G+ L G+V + DG+ G+ A ++G AQ + +++ Sbjct: 255 RLPVAALAEADGTGLRLRGLVASPDGRELLRAEAVGSL--AHSVGEQVAQALLAQGAQHI 312 Query: 305 FN 306 + Sbjct: 313 ID 314 >gi|218437216|ref|YP_002375545.1| porphobilinogen deaminase [Cyanothece sp. PCC 7424] gi|218169944|gb|ACK68677.1| porphobilinogen deaminase [Cyanothece sp. PCC 7424] Length = 320 Score = 266 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 162/306 (52%), Gaps = 5/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIG+R S LAL + + L H P + +ST+GD+I + L +IG KG Sbjct: 7 TRTVRIGSRKSQLALVQTYWVQEQLQKHH--PDRQFEVETMSTQGDKILDVALAKIGDKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119 LFT+E+E ++ G+ D AVHS KD+PTKL GL + R D D + H + ++ Sbjct: 65 LFTKELEVSMLEGQTDLAVHSLKDLPTKLPDGLMLGCITERVDPADGLVVNEKHKDKQIE 124 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +VIGTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG+ RL Sbjct: 125 TLPEGAVIGTSSLRRLAQLRYHFPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLTRL 184 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I +++ + + GQGA+ IE +P+ EL+KV+ H+ T D ER+FL E Sbjct: 185 GMSDRIHQVIPSDISLHAVGQGALGIECRTEDPEILELLKVLEHQPTRDRCYAERSFLRE 244 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I G TL G+V + DGK + + G DA +G+D A +R Sbjct: 245 LEGGCQVPIGVNTSVDGDTLTLTGMVASLDGKKLIKDTITGKTTDAEQLGKDLAIRVRNA 304 Query: 300 SNKNVF 305 + Sbjct: 305 GAGEIL 310 >gi|83941602|ref|ZP_00954064.1| porphobilinogen deaminase [Sulfitobacter sp. EE-36] gi|83847422|gb|EAP85297.1| porphobilinogen deaminase [Sulfitobacter sp. EE-36] Length = 317 Score = 266 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 131/305 (42%), Positives = 177/305 (58%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + P RIGTR SPLA+A A+ETR+ L +IP I+ + GD I +R L +IGGKG Sbjct: 9 ENPMRIGTRGSPLAMAQAYETRARLAAAFEIPQAAFEIVVIKVTGDVIQDRPLKDIGGKG 68 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT EIE+ L++G+ID AVHS KDMPT GL + YLPRED RD F++ T +L LA Sbjct: 69 LFTREIEEDLLAGKIDIAVHSMKDMPTIQPGGLLLDTYLPREDPRDAFVAPTLSALDQLA 128 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG+ RL + Sbjct: 129 EGAVVGTSSLRRRAQLLHQRPDLQVVEFRGNVQTRLKKLADGVAECTFLAVAGLNRLGMQ 188 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V ++ P+ QGAI IE + + ++ I+ T + ERAFL LDG Sbjct: 189 HVPATPIDDTLMLPAVAQGAIGIERRAGDLDTEAMLAAIHDTPTGQRLAAERAFLLTLDG 248 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC++ IAG A G TL+ G VL DG R+G +G D AQ + + Sbjct: 249 SCETPIAGLATLDGDTLHLRGQVLRPDGSEAIAGDRSGPIAQGGQMGVDLAQDLLAQAGP 308 Query: 303 NVFNF 307 F++ Sbjct: 309 GFFDW 313 >gi|187478790|ref|YP_786814.1| porphobilinogen deaminase [Bordetella avium 197N] gi|115423376|emb|CAJ49910.1| porphobilinogen deaminase [Bordetella avium 197N] Length = 314 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 105/300 (35%), Positives = 159/300 (53%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A R L D++ P + ++ L+T+GD+I +R+L+++GGKGLF Sbjct: 7 LVIATRASRLALWQAEHVRDRLRDLY--PACAVELLTLTTRGDQILDRSLSKVGGKGLFV 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P + +S L R D RD F+S SL L + + Sbjct: 65 KELEHALLDGRADLAVHSLKDVPVDIQAPFALSTVLERADPRDAFVSARYASLDALPVGA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+A + R D+ V RG ++TRL KL+ + A++LA AG++R+ I Sbjct: 125 VVGTSSLRREAQIRAARPDLVVRPLRGNLDTRLGKLDRGEYDAVVLAAAGLERIGYGDRI 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L P+ GQGA+ IE + + + ++ T V+ ERA L GSC+ Sbjct: 185 RARLAPAQSLPAAGQGALGIEIRDDRDDMRAWLAPLSDASTTACVSAERAVSRALGGSCQ 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 I +A G TL +V + DG+ SR G +A ++G A + + Sbjct: 245 VPIGAYAELHGQTLRIDALVASPDGRRILRASRLGPVAEADSLGMAVAHDLLAQGGDAIL 304 >gi|317402904|gb|EFV83446.1| HemC protein [Achromobacter xylosoxidans C54] Length = 314 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 102/307 (33%), Positives = 155/307 (50%), Gaps = 3/307 (0%) Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + I TR S LAL A R L ++ P + ++ L+T+GD+I +RTL+++G Sbjct: 1 MSLPQRLVIATRASRLALWQAEHVRDRLRTLY--PACAVELLTLTTRGDQILDRTLSKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E L+ G D AVH KDMP + ++ A L R D RD F+S+ +L Sbjct: 59 GKGLFVKELETALLDGRADLAVHCLKDMPVDMQAPFELCAVLDRADPRDAFVSNRYATLA 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL +V+GTSSLRR++ + + V RG ++TRL KL+ + AI+LA AG+ RL Sbjct: 119 DLPAGAVVGTSSLRRESQIRARYPQLLVKPLRGNLDTRLGKLDRGEYDAIVLAAAGLNRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I +L+ + P+ GQGA+ IE + + + +N ERA Sbjct: 179 GLTDRISSLLDPAESLPAAGQGALTIEIRDDRDDMRAWLAPLNDAGATSISLAERAVSRR 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L GSC+ +A +A TL +V + DG +G A IG A + Sbjct: 239 LGGSCQVPLAAYAEIADDTLTLRALVASPDGTRMLRAHGSGPVAQAQAIGEAVAAELFDA 298 Query: 300 SNKNVFN 306 + + + Sbjct: 299 GAQAILD 305 >gi|222087476|ref|YP_002546013.1| porphobilinogen deaminase [Agrobacterium radiobacter K84] gi|221724924|gb|ACM28080.1| porphobilinogen deaminase [Agrobacterium radiobacter K84] Length = 322 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 164/308 (53%), Positives = 216/308 (70%), Gaps = 1/308 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A E R LM H +P I+ L+TKGDRI +RTL EIGG Sbjct: 14 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHGLPEEMFEIVALTTKGDRIADRTLAEIGG 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+KL SGE+D AVHSAKDM TKL +GL ++AYLPREDIRD I TA L + Sbjct: 74 KGLFTQELEEKLTSGELDFAVHSAKDMATKLPEGLALTAYLPREDIRDSVIGRTAPKLIE 133 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G++SLRR+AL+ R R DI+VI FRG ++TRL KL +A A LLA AG+KRL Sbjct: 134 LPHGATVGSASLRRQALIRRLRPDINVITFRGSVQTRLRKLEEGQADATLLAVAGLKRLG 193 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K VI +IL+ ++FPP+P QGAI IE+ + + + +L+ IN T+D V+CER FLA L Sbjct: 194 KVDVITDILDPDEFPPAPAQGAIGIESRIGDKRMNDLLAAINDSPTFDIVSCERGFLAAL 253 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG+A C+G + F+G++L DG+ H + GNR DA +G +A Q IR + Sbjct: 254 DGSCRTPIAGYAVCEGDHIRFFGMILTPDGQQVHTTTIEGNRRDAEALGTNAGQAIRAEA 313 Query: 301 NKNVF-NF 307 F ++ Sbjct: 314 GSAFFEDW 321 >gi|83855078|ref|ZP_00948608.1| porphobilinogen deaminase [Sulfitobacter sp. NAS-14.1] gi|83842921|gb|EAP82088.1| porphobilinogen deaminase [Sulfitobacter sp. NAS-14.1] Length = 317 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 131/305 (42%), Positives = 177/305 (58%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + P RIGTR SPLA+A A+ETR+ L +IP I+ + GD I +R L +IGGKG Sbjct: 9 ENPMRIGTRGSPLAMAQAYETRARLAAAFEIPQAAFEIVVIKVTGDVIQDRPLKDIGGKG 68 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT EIE+ L++G+ID AVHS KDMPT GL + YLPRED RD F++ T +L LA Sbjct: 69 LFTREIEEDLLAGKIDIAVHSMKDMPTIQPGGLLLDTYLPREDPRDAFVAPTLSALDQLA 128 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG+ RL + Sbjct: 129 ESAVVGTSSLRRRAQLLHQRPDLQVVEFRGNVQTRLKKLADGVAECTFLAVAGLNRLGMQ 188 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V ++ P+ QGAI IE + + ++ I+ T + ERAFL LDG Sbjct: 189 HVPATPIDDTLMLPAVAQGAIGIERRAGDLDTEAMLAAIHDTPTGQRLAAERAFLLTLDG 248 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC++ IAG A G TL+ G VL DG R+G +G D AQ + + Sbjct: 249 SCETPIAGLATLDGDTLHLRGQVLRPDGSEAIAGDRSGPIAQGGQMGVDLAQDLLAQAGP 308 Query: 303 NVFNF 307 F++ Sbjct: 309 GFFDW 313 >gi|311105076|ref|YP_003977929.1| porphobilinogen deaminase [Achromobacter xylosoxidans A8] gi|310759765|gb|ADP15214.1| porphobilinogen deaminase [Achromobacter xylosoxidans A8] Length = 315 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 169/306 (55%), Gaps = 3/306 (0%) Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + I TR S LAL A R L ++ P + ++ L+T+GD+I +RTL+++G Sbjct: 1 MSLPQRLVIATRASRLALWQAEHVRDRLRTLY--PACAVELLTLTTRGDQILDRTLSKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E L+ G D AVHS KD+P L ++ A L R D RD F+S+T +L Sbjct: 59 GKGLFVKELENALLDGRADLAVHSLKDVPVDLQAPFELCAVLDRADPRDAFVSNTHDTLA 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL +V+GTSSLRR++ + ++ V RG ++TRL KL+ + AI+LA AG++RL Sbjct: 119 DLPAGAVVGTSSLRRESQIRARYPELVVKPLRGNLDTRLGKLDKGEYDAIVLAAAGLERL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I+ +L ED P+ GQGA+ IE + + + + DT V ERA + Sbjct: 179 GLGARIRSLLEPEDSLPAAGQGALGIEIRDDRDDMRAWLAPLVSADTTSCVVAERAVSRK 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L GSC+ +A +A G TL +V + DG SR+G DA IG AAQ + Sbjct: 239 LGGSCQVPLAAYAEIAGGTLSLRALVASPDGVRMVHASRSGPVADAQAIGEAAAQALLDA 298 Query: 300 SNKNVF 305 +++ Sbjct: 299 GAQDIL 304 >gi|319780787|ref|YP_004140263.1| porphobilinogen deaminase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166675|gb|ADV10213.1| porphobilinogen deaminase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 308 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 142/306 (46%), Positives = 208/306 (67%), Gaps = 1/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ RIGTR SPLALA A ET++ LM H +P ++ +ST GDRI +R L+E GG Sbjct: 1 MQT-ILRIGTRGSPLALAQAHETQARLMAAHGMPAEAFEVVVISTSGDRIQDRPLSEAGG 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L++G ID AVHS+KDMPT+L GL++SA+LPRED RD F+ A+++ + Sbjct: 60 KGLFTKEIEEALLAGRIDIAVHSSKDMPTQLPDGLELSAFLPREDARDAFVGKVAKAIAE 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R D+ V+ FRG ++TRL KL A +LAYAG+KRL Sbjct: 120 LPRGAKVGSSSLRRQALIRRMRPDLDVVMFRGNVQTRLRKLEEGVAAGTILAYAGLKRLG 179 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E V+ +++ ++ FPP+PGQGAI IET + + ++++ ++ T ++ CERAFLA L Sbjct: 180 LEHVVTDLIPLDVFPPAPGQGAIGIETRIGDRDVEKMLAAVHDVPTGQALACERAFLAAL 239 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG+A + L F G++++ DG H V G+ DA IG +AA+ +R + Sbjct: 240 DGSCRTPIAGYAAIEAGKLSFAGLIISPDGTQSHTVELQGSAQDAARIGGEAARSVRARA 299 Query: 301 NKNVFN 306 + F+ Sbjct: 300 GEKFFD 305 >gi|260464233|ref|ZP_05812426.1| porphobilinogen deaminase [Mesorhizobium opportunistum WSM2075] gi|259030036|gb|EEW31319.1| porphobilinogen deaminase [Mesorhizobium opportunistum WSM2075] Length = 308 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 139/306 (45%), Positives = 207/306 (67%), Gaps = 1/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ +IGTR SPLALA A ET++ LM H +P ++ +ST GDRI +R L+E GG Sbjct: 1 MQT-TLKIGTRGSPLALAQAHETQARLMAAHGMPAEAFEVVVISTSGDRIQDRPLSEAGG 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L++G ID AVHS+KDMPT+L GL++SA+L RED RD ++ +++ D Sbjct: 60 KGLFTKEIEEALLAGAIDIAVHSSKDMPTQLPDGLELSAFLSREDARDAYVGKATKTIAD 119 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R D+ V+ FRG ++TRL KL+ A +LAYAG+KRL Sbjct: 120 LPRGAKVGSSSLRRQALIRRMRPDLDVVMFRGNVQTRLRKLDEGVAAGTILAYAGLKRLG 179 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + V+ +++ ++ FPP+PGQGAI IET + + ++++ I+ T ++ CERAFLA L Sbjct: 180 LDHVVTDLIPLDVFPPAPGQGAIGIETRIGDRAVEKMLVAIHDVPTGQALACERAFLAAL 239 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG+A +G L F G++++ DG H + G DA IG +AA+ +R + Sbjct: 240 DGSCRTPIAGYAAIEGGKLSFAGLIISPDGTQSHTIDLQGPAQDAALIGTEAARTVRAKA 299 Query: 301 NKNVFN 306 + F+ Sbjct: 300 GEKFFD 305 >gi|293604316|ref|ZP_06686723.1| hydroxymethylbilane synthase [Achromobacter piechaudii ATCC 43553] gi|292817193|gb|EFF76267.1| hydroxymethylbilane synthase [Achromobacter piechaudii ATCC 43553] Length = 315 Score = 265 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 163/306 (53%), Gaps = 3/306 (0%) Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + I TR S LAL A R L ++ P + ++ L+T+GD+I +RTL+++G Sbjct: 1 MSLPQRLVIATRASRLALWQAEHVRDRLRTLY--PACAVELLTLTTRGDQILDRTLSKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E L+ G D AVHS KD+P L ++ A L R D RD F+S+ L Sbjct: 59 GKGLFVKELENALLDGRADLAVHSLKDVPVDLQAPFELCAILDRADPRDAFVSNRYAGLA 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL +V+GTSSLRR++ + + V RG ++TRL KL+ + AI+LA AG++RL Sbjct: 119 DLPAGAVVGTSSLRRESQIRARFPTLVVKPLRGNLDTRLGKLDKGEYDAIVLAAAGLQRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E I+ +L+ D P+ GQGA+ IE + + + + T V ERA + Sbjct: 179 GLESRIRSLLDPADSLPAAGQGALGIEIRNDRDDMRAWLAPLISAATTSCVQAERAVSRK 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L GSC+ +A FA G TL +V + DG R+G DA +G AAQ + Sbjct: 239 LGGSCQVPLAAFAEISGDTLSLRALVASPDGVRMVHTRRSGPVADAQALGEAAAQELLDA 298 Query: 300 SNKNVF 305 + Sbjct: 299 GAAAIL 304 >gi|269468208|gb|EEZ79901.1| porphobilinogen deaminase [uncultured SUP05 cluster bacterium] Length = 304 Score = 265 bits (676), Expect = 8e-69, Method: Composition-based stats. Identities = 107/304 (35%), Positives = 169/304 (55%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K +I TR SPLAL A ++ L H P NI ++ ++T+GD+I N L++IGGK Sbjct: 1 MNKTLKIATRKSPLALWQAEHVKTRLETHH--PDLNIELVKMTTQGDQILNSPLSKIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KDMP ++ +G + A L RE+ D F+S+ ++ DL Sbjct: 59 GLFIKELEVGMMEGVADIAVHSMKDMPYEIPQGFALGAILKRENPFDAFVSNHFDNIDDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GT S+RR L R D+ ++D RG + TRL KL++ + AI+LA AG+ RL Sbjct: 119 PQCAKVGTCSMRRIVQLKAIRPDLEILDLRGNVNTRLKKLDDGEYDAIILACAGLIRLGF 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E IK+ ++ E P+ GQGA+ IE N+ + +L+ + +T V+ ERA +L+ Sbjct: 179 EDRIKQQISPEQSLPAVGQGAVGIEIRENDQEILDLITPLIDVETTHRVSAERAMNEKLE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C IAGF+ + + G+V D + G+ A +G + A + + Sbjct: 239 GGCSVPIAGFSTIDNNQMTLTGLVGNVDTGTILKQQVCGDVAKAEALGVELADKLLSLGA 298 Query: 302 KNVF 305 ++V Sbjct: 299 RDVL 302 >gi|241206704|ref|YP_002977800.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860594|gb|ACS58261.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 309 Score = 265 bits (676), Expect = 8e-69, Method: Composition-based stats. Identities = 164/306 (53%), Positives = 217/306 (70%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A E R LM H +P I+ L+TKGDRIT+R+L EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEDMFEIVVLTTKGDRITDRSLAEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E+KL +GE+D AVHSAKDM TKL +GL +SAYLPREDIRD I TA+ L D Sbjct: 61 KGLFTEELEQKLAAGELDFAVHSAKDMATKLPEGLYLSAYLPREDIRDAVIGRTARKLID 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R DI+VI FRG +ETRL KL + A LLA AG+KRL Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVITFRGLVETRLRKLEQGEVDATLLALAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K V+ +IL+ + FPP+P QGAICIE+ + + + +L+ +N T+D+V+CERAFLA L Sbjct: 181 KVDVLTDILDPDTFPPAPAQGAICIESRIGDARVDDLLAPVNDGPTFDTVSCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R + Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300 Query: 301 NKNVFN 306 F+ Sbjct: 301 GSAFFD 306 >gi|116254224|ref|YP_770062.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. viciae 3841] gi|115258872|emb|CAK09980.1| putative porphobilinogen deaminase [Rhizobium leguminosarum bv. viciae 3841] Length = 309 Score = 265 bits (676), Expect = 8e-69, Method: Composition-based stats. Identities = 163/306 (53%), Positives = 217/306 (70%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A E R LM H +P I+ L+TKGDRIT+R+L EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEDMFEIVVLTTKGDRITDRSLAEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E+KL +GE+D AVHSAKDM TKL +GL +SAYLPREDIRD I TA+ L D Sbjct: 61 KGLFTEELEQKLTAGELDFAVHSAKDMATKLPEGLYLSAYLPREDIRDAVIGRTARKLID 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R DI+V+ FRG +ETRL KL + A LLA AG+KRL Sbjct: 121 LPHGATVGSSSLRRQALIRRMRPDINVVTFRGLVETRLRKLEEGEVDATLLALAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K V+ +IL+ + FPP+P QGAICIE+ + + + +L+ +N T+D+V+CERAFLA L Sbjct: 181 KVDVLTDILDPDTFPPAPAQGAICIESRIGDARIDDLLAPVNDIMTFDTVSCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ I G+A C+G + F G+++ DG+ H V+ +G+R DA +G A Q +R + Sbjct: 241 DGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARA 300 Query: 301 NKNVFN 306 F+ Sbjct: 301 GSAFFD 306 >gi|89069761|ref|ZP_01157097.1| porphobilinogen deaminase [Oceanicola granulosus HTCC2516] gi|89044707|gb|EAR50818.1| porphobilinogen deaminase [Oceanicola granulosus HTCC2516] Length = 313 Score = 264 bits (675), Expect = 9e-69, Method: Composition-based stats. Identities = 132/305 (43%), Positives = 176/305 (57%), Gaps = 1/305 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +P +IGTR SPLALA A ETR L H +P ++ + T GDR+ +R L EIGGKG Sbjct: 8 DRPLKIGTRGSPLALAQAHETRDRLAAAHGLPGEAFEVVVIRTTGDRVVDRPLKEIGGKG 67 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+EIE+ ++SG ID AVHS KDMP +GL + YLPRED RD F+S +K L Sbjct: 68 LFTKEIEEAMLSGAIDIAVHSMKDMPVAQPEGLVLDCYLPREDPRDAFVSLLHAGIKALP 127 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRRKA LL R D+ V++FRG ++TRL KL + A A LA AG+ RL + Sbjct: 128 DGATVGTSSLRRKAQLLHRRPDLHVVEFRGNVQTRLRKLESGVAVATFLAVAGLNRLGAD 187 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V + + ED P+ QGAI IE ++ E++ I+ T + + ERAFLA LDG Sbjct: 188 DVPQAPIAPEDMLPAVAQGAIGIERRASDEGLGEMLAAIHDRATGERLAAERAFLAALDG 247 Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 SC++ IAG A G L G +LA DG D +G D A+ + + Sbjct: 248 SCETPIAGLAELIGDGRLRLRGEILAHDGSRCLADEAEAQIADGAALGTDMARRLLAQAG 307 Query: 302 KNVFN 306 F+ Sbjct: 308 PGFFD 312 >gi|332706560|ref|ZP_08426621.1| hydroxymethylbilane synthase [Lyngbya majuscula 3L] gi|332354444|gb|EGJ33923.1| hydroxymethylbilane synthase [Lyngbya majuscula 3L] Length = 322 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 160/305 (52%), Gaps = 5/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + + L P + +ST GD+I + L++IG KGL Sbjct: 10 RTIRIGSRKSQLALIQTYWVQEQLKK--HFPDREFEVQTMSTHGDKILDVALSKIGDKGL 67 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKD 120 FT+E+E ++ EID AVHS KD+PT+L +GL + RE+ D + H + ++ Sbjct: 68 FTKELELGMLRDEIDFAVHSLKDLPTRLPEGLVLGCVTERENPADALVMHQKHLDKQIET 127 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S+IGTSSLRR A L +S D RG + TRL KL+ A++LA AG+KRL Sbjct: 128 LPEGSIIGTSSLRRLAQLRYHFPHLSFKDVRGNLNTRLAKLDAGDYDALILAVAGLKRLD 187 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +IL E + GQGA+ IE ++ + EL+ I H T ER+ L L Sbjct: 188 MSDRIHQILPPEISLHAVGQGALGIECREDDQEVLELLNAIAHPPTAQRCYAERSLLRAL 247 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +G+TL IV + DG+ + + G + A N+G + A+ ++ Sbjct: 248 EGGCQVPIGVDTQLEGNTLTLTAIVASVDGQKLVKDTIQGEQSQAENLGLELAEQLKKQG 307 Query: 301 NKNVF 305 + + Sbjct: 308 AQEIL 312 >gi|33593520|ref|NP_881164.1| porphobilinogen deaminase [Bordetella pertussis Tohama I] gi|39931430|sp|Q7VVU9|HEM3_BORPE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|33572876|emb|CAE42812.1| porphobilinogen deaminase [Bordetella pertussis Tohama I] gi|332382928|gb|AEE67775.1| porphobilinogen deaminase [Bordetella pertussis CS] Length = 314 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 109/300 (36%), Positives = 158/300 (52%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A R L + P ++ ++ L+T+GD+I +RTL+++GGKGLF Sbjct: 7 LTIATRASRLALWQAEHVRDLLRARY--PACSVELLTLTTRGDQILDRTLSKVGGKGLFV 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P L ++S L R D RD F+S+ SL DL + Sbjct: 65 KELETALLDGRADLAVHSLKDVPVDLHAPFELSCVLERADPRDAFVSNDYGSLADLPPGA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR++ + + V RG ++TRL KL+N AI+LA AG++RL I Sbjct: 125 AVGTSSLRRESQIRARYPHLVVKPLRGNLDTRLGKLDNGDYAAIVLAAAGLERLGLAARI 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + +L +D P+ GQGA+ IE + ++ + T V ERA L GSC+ Sbjct: 185 RALLEPDDSLPAAGQGALGIEILQGRADVRAMLAPLGDAATLACVTAERAVSRMLGGSCQ 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A +A G L +V A DG+ R G R A IG AA+ + + Sbjct: 245 VPLAAYARIDGDELALRALVAAPDGRRIVRAERRGPRDQAQAIGESAARDLLADGADAIL 304 >gi|149915548|ref|ZP_01904074.1| porphobilinogen deaminase [Roseobacter sp. AzwK-3b] gi|149810440|gb|EDM70283.1| porphobilinogen deaminase [Roseobacter sp. AzwK-3b] Length = 304 Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 127/302 (42%), Positives = 177/302 (58%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++GTR SPLALA A+ETRS L +PP I+ + T GDRI +R L EIGGKGLFT Sbjct: 1 MKLGTRGSPLALAQAYETRSRLSAAFDLPPEAFEIVVIKTTGDRIIDRPLKEIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EIE+ ++SGEID A+HS KDMP +GL + YLPRED+RD F+S L DL + Sbjct: 61 REIEEAMLSGEIDIAIHSMKDMPVLQPEGLVLDTYLPREDVRDAFVSPHVGGLADLEPGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRRKA +L + V++FRG ++TRL KL + A LA AG+ RL + +V Sbjct: 121 KVGTSSLRRKAQVLVAYPHLDVVEFRGNVQTRLKKLQDGVAACTFLAMAGLNRLGRSEVA 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ P+ QGAI IE ++ + E++ I+ T + ERAFLA LDGSC+ Sbjct: 181 TAAIETDEMLPAVAQGAIGIERRRDDTRTAEMLAAIHDTPTGQRLAAERAFLAALDGSCE 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + IAG A G TL G VL DG + ++ D +G + + + + F Sbjct: 241 TPIAGLAELDGGTLRLRGQVLRPDGSEALDDDQSAPIEDGAKLGHEMGRKLLERAGPGFF 300 Query: 306 NF 307 ++ Sbjct: 301 DW 302 >gi|302038053|ref|YP_003798375.1| porphobilinogen deaminase [Candidatus Nitrospira defluvii] gi|300606117|emb|CBK42450.1| Porphobilinogen deaminase [Candidatus Nitrospira defluvii] Length = 310 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 162/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +GTR S LA+ + ++ L ++ P I + + T GD+I + L +IGG Sbjct: 1 MNRSTLILGTRGSKLAVHQSQWVQARLQEL--APGLTISLQRIQTSGDKILDVPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE L+S EID AVHS KD+PT L +GL I PRED RD I+ L Sbjct: 59 KGLFVKEIEDALLSKEIDLAVHSMKDVPTALPEGLDILCVPPREDPRDALITRDGCRLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSSLRR+A LL +R D ++ RG ++TRL KL + AI+LA AG++RL Sbjct: 119 LKPGAKIGTSSLRRQAQLLHYRPDFTIEMLRGNLDTRLRKLREGQFDAIVLAAAGLRRLA 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I E L + P+ QGA+ IE ++ +EL+ H T +V ERA L L Sbjct: 179 WDAEITEYLPVHLSLPAIAQGALGIEARSDDTFVRELLSRFEHRPTRITVTAERALLHRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA A +G L G+V + DG+ G +A +G A+ + Sbjct: 239 EGGCQVPIAAHAALEGDRLTVDGLVASVDGRRVIRHQIQGPASEAQALGTKLAERLLADG 298 Query: 301 NKNVF 305 + Sbjct: 299 GDVIL 303 >gi|254511195|ref|ZP_05123262.1| porphobilinogen deaminase [Rhodobacteraceae bacterium KLH11] gi|221534906|gb|EEE37894.1| porphobilinogen deaminase [Rhodobacteraceae bacterium KLH11] Length = 318 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 126/307 (41%), Positives = 176/307 (57%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A+ETR L +P I+ + T GD +R L E+G Sbjct: 11 PLKIGTRGSPLALAQAYETRRRLSTAFDLPEDAFEIVVIKTTGDNRAMIDADRPLKEVGN 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ ++ GEID AVHS KDMP +GL + +LPRED+RD FIS S+ D Sbjct: 71 KGLFTKEIEEAMLKGEIDIAVHSTKDMPVAQPQGLVLDTFLPREDVRDAFISPGLNSIHD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A LA AG++RL+ Sbjct: 131 LPRGAVVGTSSLRRRAQLLNRRPDLKVVEFRGNVQTRLKKLADGVADCTFLAMAGLRRLE 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V ++ +D P+ QGAI IE ++ +A ++ I+H +T + ER+ LA L Sbjct: 191 MADVPATAISPDDMLPAIAQGAIGIERRNDDSRAAGMLAAIHHPETAQRLAAERSLLAGL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A + L G VL DG G +G+ A + + Sbjct: 251 DGSCETPIAGLAEIRDGQLRLRGEVLRPDGTESIHEEAFGPVESGAKMGQAMADTLLKKA 310 Query: 301 NKNVFNF 307 N F++ Sbjct: 311 GPNFFDW 317 >gi|257059870|ref|YP_003137758.1| porphobilinogen deaminase [Cyanothece sp. PCC 8802] gi|256590036|gb|ACV00923.1| porphobilinogen deaminase [Cyanothece sp. PCC 8802] Length = 320 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 161/306 (52%), Gaps = 5/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIG+R S LAL + + L H P H + +ST+GD+I + L +IG KG Sbjct: 7 TRSIRIGSRKSQLALVQTYWVQKELQRHH--PQHQFDVETMSTQGDKILDVALAKIGDKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119 LFT+E+E + ++D AVHS KD+PT L GL + R D D + + + L Sbjct: 65 LFTKELEVAMEQNQVDLAVHSLKDLPTNLPTGLILGCVTERVDPADALVVNQKHLDKQLD 124 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +VIGTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG++RL Sbjct: 125 TLPEGAVIGTSSLRRLAQLRHHFPHLTFKDVRGNVNTRLKKLDEGEYDAIILAVAGLQRL 184 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I +++ E + GQGA+ IE + + L+KV+ HE T D ERAFL E Sbjct: 185 DMSDRIHQVIPSEISLHAVGQGALGIECREGDEEVLALLKVLEHEPTRDRCYAERAFLRE 244 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I +G TL G+V + DG+ + + +G R A +GRD A +R Sbjct: 245 LEGGCQVPIGVNTEIEGDTLTLTGMVASLDGQTLLKDTISGPRESAEQLGRDLANRLREA 304 Query: 300 SNKNVF 305 V Sbjct: 305 GAGEVL 310 >gi|194367302|ref|YP_002029912.1| porphobilinogen deaminase [Stenotrophomonas maltophilia R551-3] gi|238059002|sp|B4SJT8|HEM3_STRM5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|194350106|gb|ACF53229.1| porphobilinogen deaminase [Stenotrophomonas maltophilia R551-3] Length = 303 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 108/302 (35%), Positives = 160/302 (52%), Gaps = 2/302 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL + L H P ++ ++P+ST+GD + +R+L IGGKGLF Sbjct: 3 TVRIATRKSPLALWQSEHVADRLRQAH--PGLHVELVPMSTRGDEVLDRSLAAIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ GE DCAVHS KD+P +L + + A L R D D F+S+ SL L + Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDEPFALPAMLTRHDPADGFVSNLYASLDALPIG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A L R D+ ++D RG + TRL KL+N AI+LA AG++RL + Sbjct: 121 ARVGTSSLRRQAQLRALRPDLQLLDLRGNVNTRLAKLDNGGYDAIVLAVAGLERLGLGER 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L + P+P QGA+ +E +N + L ++ T V ERA L GSC Sbjct: 181 IVARLQPPQWLPAPAQGAVAVECDGSNARLMALFAGLDDAATRACVEAERAMNRALHGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 +A A +G L+ G+V ++ G D +G+ A+ + + Sbjct: 241 HVPVAAIAQWQGQDLHLQGLVGSASDGRAVRAEAVGPASDPEVLGQRVAKMLLDAGAGEL 300 Query: 305 FN 306 N Sbjct: 301 LN 302 >gi|218246829|ref|YP_002372200.1| porphobilinogen deaminase [Cyanothece sp. PCC 8801] gi|218167307|gb|ACK66044.1| porphobilinogen deaminase [Cyanothece sp. PCC 8801] Length = 320 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 161/306 (52%), Gaps = 5/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIG+R S LAL + + L H P H + +ST+GD+I + L +IG KG Sbjct: 7 TRSIRIGSRKSQLALVQTYWVQKELQRHH--PQHQFDVETMSTQGDKILDVALAKIGDKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119 LFT+E+E + ++D AVHS KD+PT L GL + R D D + H + L Sbjct: 65 LFTKELEVAMEQNQVDLAVHSLKDLPTNLPTGLILGCVTERVDPADALVVNKKHLDKQLD 124 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +VIGTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG++RL Sbjct: 125 TLPEGAVIGTSSLRRLAQLRHHFPHLTFKDVRGNVNTRLKKLDEGEYDAIILAVAGLQRL 184 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I +++ E + GQGA+ IE + + L+KV+ HE T D ERAFL E Sbjct: 185 DMSDRIHQVIPSEISLHAVGQGALGIECREGDEEVLALLKVLEHEPTRDRCYAERAFLRE 244 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I +G TL G+V + DG+ + + +G R A +GRD A +R Sbjct: 245 LEGGCQVPIGVNTEIEGDTLTLTGMVASLDGQTLLKDTISGPRESAEQLGRDLANRLREA 304 Query: 300 SNKNVF 305 V Sbjct: 305 GAGEVL 310 >gi|261856741|ref|YP_003264024.1| porphobilinogen deaminase [Halothiobacillus neapolitanus c2] gi|261837210|gb|ACX96977.1| porphobilinogen deaminase [Halothiobacillus neapolitanus c2] Length = 319 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 102/301 (33%), Positives = 157/301 (52%), Gaps = 3/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLA+ L +H P + ++ ++TKGD++ + L +IGGKGLF Sbjct: 11 IRIATRESPLAMWQTEFVADELRRLH--PGLRVELVSMTTKGDQLLDSPLAKIGGKGLFV 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P + GL++ A L D RD F+S+ +SL L + Sbjct: 69 KELELALMDGRADIAVHSMKDVPMRFPDGLELIAILEGHDPRDAFVSNEYESLAALPAGA 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ + + + RG I++R+ KL+ AI+LA AG+KR+ + I Sbjct: 129 VVGTSSLRRETQIRSRYPQLEIKMLRGNIQSRMAKLDRGDYDAIILAAAGLKRMGYDARI 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L+ E+ PS GQGA+ IE ++ L+ + H T V ERAF L+G C+ Sbjct: 189 RAELSPEESLPSVGQGALGIEARSDDAAIHALIAPLIHAATTTRVLAERAFNTRLNGGCQ 248 Query: 246 SAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 I G+A + L+ G+V DG + G + +G A+ + + Sbjct: 249 VPIGGYAMLQDDGNLWLRGMVGRPDGTLTLRDEITGAATEGEALGVALAERMLAAGADKI 308 Query: 305 F 305 Sbjct: 309 L 309 >gi|254522867|ref|ZP_05134922.1| porphobilinogen deaminase [Stenotrophomonas sp. SKA14] gi|219720458|gb|EED38983.1| porphobilinogen deaminase [Stenotrophomonas sp. SKA14] Length = 303 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 108/302 (35%), Positives = 158/302 (52%), Gaps = 2/302 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL + L H P ++ ++P+ST+GD + +R+L IGGKGLF Sbjct: 3 TVRIATRKSPLALWQSEHVADRLRQAH--PGLHVELVPMSTRGDEVLDRSLAAIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E ++ GE DCAVHS KD+P +L + A L R D D F+S+ SL+ L + Sbjct: 61 LKELELAMLRGEADCAVHSLKDVPMELDAPFALPAMLTRHDPADGFVSNLYASLEALPIG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A L R D+ ++D RG + TRL KL+N AI+LA AG++RL + Sbjct: 121 ARVGTSSLRRQAQLRALRPDLELLDLRGNVNTRLAKLDNGGYDAIVLAVAGLERLGLGQR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L + P+P QGA+ +E N + L ++ T V ERA L GSC Sbjct: 181 IVARLQPPQWLPAPAQGAVAVECDGGNARLMALFAGLDDASTRACVEAERAMNRALHGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 +A A +G L+ G+V ++ G D +G+ A + + Sbjct: 241 HVPVAAIAQWQGDDLHLQGLVGSASDGRAVRAEAVGPASDPDALGQRVATMLLDAGAGEL 300 Query: 305 FN 306 N Sbjct: 301 LN 302 >gi|119511003|ref|ZP_01630124.1| porphobilinogen deaminase [Nodularia spumigena CCY9414] gi|119464348|gb|EAW45264.1| porphobilinogen deaminase [Nodularia spumigena CCY9414] Length = 323 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 108/307 (35%), Positives = 160/307 (52%), Gaps = 5/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIG+R S LAL + R L P + + +ST+GD I + L +IG KG Sbjct: 9 TRTIRIGSRKSQLALVQTYWVRDQLQK--SFPDISFEVHTMSTQGDNILDVALAKIGDKG 66 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119 LFT+E+E +++ EID AVHS KD+PT L GL ++ RE+ D + H + ++ Sbjct: 67 LFTKELEVGMLNQEIDFAVHSLKDLPTNLPSGLTLAVITERENPADALVVHDKYKDKQIE 126 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +VIGTSSLRR A L + D RG + TRL KL++ + A++LA AG++RL Sbjct: 127 TLPAGAVIGTSSLRRLAQLRNKFPHFTFKDVRGNLNTRLKKLDSGEYDALILAAAGLERL 186 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I +IL E + GQGA+ IE ++ + ++K I H +T D ERAFL Sbjct: 187 GMSDRIHQILPKEISLHAVGQGALGIECRADDKEIINILKAIEHSETRDRCLAERAFLRI 246 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I G L GIV + DG+ + + G DA +G + A +R Sbjct: 247 LEGGCQVPIGVNTVIDGDNLTLTGIVASVDGQKLVKDTVTGAAKDAEKLGAELAALLREQ 306 Query: 300 SNKNVFN 306 + + Sbjct: 307 GAQEILE 313 >gi|186683929|ref|YP_001867125.1| porphobilinogen deaminase [Nostoc punctiforme PCC 73102] gi|186466381|gb|ACC82182.1| porphobilinogen deaminase [Nostoc punctiforme PCC 73102] Length = 336 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 160/305 (52%), Gaps = 5/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + + L P + +ST+GD+I + L +IG KGL Sbjct: 23 RTIRIGSRKSQLALVQTYWVQEQLQK--SFPDITFEVHTMSTQGDKILDVALAKIGDKGL 80 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120 FT+E+E +++ EID AVHS KD+PT L +GL ++A RE+ D + H + + Sbjct: 81 FTKELEVGMLNQEIDFAVHSLKDLPTNLPEGLTLAAITERENPADALVVHEKHKDKQIDT 140 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSSLRR A L + D RG + TRL KL+ + A++LA AG++RL Sbjct: 141 LPEGAVIGTSSLRRLAQLRHHFPHFTFKDVRGNLITRLAKLDAGEYDALILAAAGLERLG 200 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + +I+ E + GQGA+ IE ++ + L+K I H T D ER+FL L Sbjct: 201 MSDRVHQIIPKEISLHAVGQGALGIECRADDSELLTLLKAIEHPATRDRCLAERSFLRSL 260 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I G L GIV + DG+ + + G +A +G + A+ +R Sbjct: 261 EGGCQVPIGVNTEISGENLTLTGIVASIDGQKLVKDTVTGIANNAEALGTELAELLRQQG 320 Query: 301 NKNVF 305 + + Sbjct: 321 AQEIL 325 >gi|192360982|ref|YP_001983840.1| porphobilinogen deaminase [Cellvibrio japonicus Ueda107] gi|190687147|gb|ACE84825.1| porphobilinogen deaminase [Cellvibrio japonicus Ueda107] Length = 315 Score = 263 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 110/300 (36%), Positives = 170/300 (56%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LAL A ++ L H P + ++PL+++GD+I + L ++GGKGLF Sbjct: 8 LRIATRKSLLALWQADYVKTELERHH--PGLRVELVPLTSRGDKILDVPLAKVGGKGLFV 65 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L++G D AVHS KD+P + GL ++ PRED RD F+S+ SL DL + Sbjct: 66 KELEQALLAGAADIAVHSMKDVPMEFPDGLGLAVICPREDARDAFVSNRFASLDDLPAGA 125 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ LL R D+ V RG ++TRL KL++ + AI+LA AG+ RL+ + I Sbjct: 126 VVGTSSLRRQCQLLARRPDLQVKFLRGNVQTRLQKLDDGEYDAIILAAAGLIRLELQARI 185 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ E P+ GQGA+ IE + + L++ ++H+ T + V ERA L G C+ Sbjct: 186 RSLIAPEVSLPAGGQGAVGIECRMQDQATLALLQPLHHQPTAEQVLAERAMNRRLQGGCQ 245 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IA +A +G L+ G+V A DG G + +G A+ + ++ Sbjct: 246 VPIACYALQQGGELWLRGLVGAPDGSQMLFDEIRGPVAEGEQMGIQLAERLLAAGADSIL 305 >gi|254466587|ref|ZP_05079998.1| porphobilinogen deaminase [Rhodobacterales bacterium Y4I] gi|206687495|gb|EDZ47977.1| porphobilinogen deaminase [Rhodobacterales bacterium Y4I] Length = 323 Score = 263 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 137/307 (44%), Positives = 181/307 (58%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A+ETRS L +P I+ + T GD ++ L E+GG Sbjct: 15 PLKIGTRGSPLALAQAYETRSRLAAAFDLPQEAFEIVVIRTTGDNQALIAADKPLKELGG 74 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+SG ID AVHS KDMP +GL + YLPRED+RD FIS +SL D Sbjct: 75 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVAQPEGLALDTYLPREDVRDAFISPALKSLHD 134 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LA +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL+ A LA AG+ RL Sbjct: 135 LAEGAVVGTSSLRRRAQLLNRRPDLKVVEFRGNVQTRLRKLSEGVADCTFLAMAGLNRLA 194 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V + D P+ QGAI IE ++ +A E++ I+ +T + ERAFLA L Sbjct: 195 MADVPANPIETSDMLPAVAQGAIGIERRADDGRAAEMLAAIHDGETGLRLAAERAFLAAL 254 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A GSTL G VL DG + D +GR+ A + + Sbjct: 255 DGSCETPIAGLAELHGSTLRLRGEVLRPDGSESISDDQTCPVEDGAELGREMAAKLLEKA 314 Query: 301 NKNVFNF 307 K F++ Sbjct: 315 GKGFFDW 321 >gi|332701796|ref|ZP_08421884.1| Porphobilinogen deaminase [Desulfovibrio africanus str. Walvis Bay] gi|332551945|gb|EGJ48989.1| Porphobilinogen deaminase [Desulfovibrio africanus str. Walvis Bay] Length = 316 Score = 263 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 161/305 (52%), Gaps = 2/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + I TR S LAL A +S L++ H + ++ L T+GD+I + L ++GGK Sbjct: 1 MRTKLTIATRGSMLALWQAEHVKSMLVERHS--GLEVELLMLKTQGDKILDVPLAKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +EIE+ L+ G D AVHS KD+PT+L +GL I RE+ D +S +L L Sbjct: 59 GLFVKEIEEALLDGRADLAVHSMKDVPTELPEGLIIGVTPKREEPADALLSVRYDNLAAL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +VIGTSS RR+A LL R D + RG + TRL KL + + AI+LA AG+ RL Sbjct: 119 PEGAVIGTSSFRRQAQLLMRRPDFEIKMLRGNVNTRLRKLMDGEYDAIVLAMAGLNRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+L DF P+ QG + IE ++ + +++ ++H +T V ER FL L+ Sbjct: 179 SAPKMEVLGPPDFLPAVSQGVLGIEYRRDDAELADMLAFMDHPETRVRVQAERGFLTALE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ IAG+A +G + G+V DG+ R+ A +G A+ + Sbjct: 239 GGCQVPIAGYAEVRGDEVRLTGLVADLDGRRVIRRERSSPAGQAWELGETLAREVLDAGG 298 Query: 302 KNVFN 306 + + Sbjct: 299 REILE 303 >gi|254414246|ref|ZP_05028013.1| porphobilinogen deaminase [Microcoleus chthonoplastes PCC 7420] gi|196178921|gb|EDX73918.1| porphobilinogen deaminase [Microcoleus chthonoplastes PCC 7420] Length = 321 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 108/306 (35%), Positives = 163/306 (53%), Gaps = 5/306 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + + L + P + + +ST GD+I + L++IG KGL Sbjct: 10 RTIRIGSRKSQLALVQTYWVQEQLHKHY--PDRDFEVQTMSTHGDKILDVALSKIGDKGL 67 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLKD 120 FT+E+E +++ EID AVHS KD+PT L +GL + RE+ D + H + L Sbjct: 68 FTKELEVGMLNQEIDLAVHSLKDLPTALPEGLVLGCVTERENPADALVLHAKHQGKQLDT 127 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSSLRR A L + D RG + TRL KL+ + A++LA AG+KRL Sbjct: 128 LPEGAVIGTSSLRRLAQLRYHFPHFTFKDIRGNLNTRLGKLDAGEFDALILAAAGLKRLD 187 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ E + GQGA+ IE ++P+ +++K I H T ERAFL EL Sbjct: 188 MSDRIHQVIPSEISLHAVGQGALGIECRGDDPEILDVLKAIEHSPTAQRCYAERAFLREL 247 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I KG+ L G+V DG + + G +A +G + AQ +R Sbjct: 248 EGGCQVPIGVNTEIKGNNLILTGMVARLDGTSLIKDTVTGEATEAEALGVELAQLLRQQG 307 Query: 301 NKNVFN 306 + + + Sbjct: 308 AQEILD 313 >gi|33597222|ref|NP_884865.1| porphobilinogen deaminase [Bordetella parapertussis 12822] gi|33601068|ref|NP_888628.1| porphobilinogen deaminase [Bordetella bronchiseptica RB50] gi|39931443|sp|Q7W785|HEM3_BORPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|39931458|sp|Q7WKM1|HEM3_BORBR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|33573649|emb|CAE37934.1| porphobilinogen deaminase [Bordetella parapertussis] gi|33575503|emb|CAE32581.1| porphobilinogen deaminase [Bordetella bronchiseptica RB50] Length = 314 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 109/300 (36%), Positives = 157/300 (52%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A R L + P ++ ++ L+T+GD+I +RTL+++GGKGLF Sbjct: 7 LTIATRASRLALWQAEHVRDLLRARY--PACSVELLTLTTRGDQILDRTLSKVGGKGLFV 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P L ++S L R D RD F+S+ SL DL + Sbjct: 65 KELETALLDGRADLAVHSLKDVPVDLHAPFELSCVLERADPRDAFVSNDYGSLADLPPGA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR++ + + V RG ++TRL KL+N AI+LA AG++RL I Sbjct: 125 AVGTSSLRRESQIRARYPHLVVKPLRGNLDTRLGKLDNGDYAAIVLAAAGLERLGLAARI 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + +L D P+ GQGA+ IE + ++ + T V ERA L GSC+ Sbjct: 185 RALLEPADSLPAAGQGALGIEILQGRADVRAMLAPLGDAATLACVTAERAVSRMLGGSCQ 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A +A G L +V A DG+ R G R A IG AA+ + + Sbjct: 245 VPLAAYARIDGDELALRALVAAPDGRRIVRAERRGPRDQAQAIGESAARDLLADGADAIL 304 >gi|84685204|ref|ZP_01013103.1| porphobilinogen deaminase [Maritimibacter alkaliphilus HTCC2654] gi|84666936|gb|EAQ13407.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2654] Length = 319 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 136/310 (43%), Positives = 183/310 (59%), Gaps = 5/310 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEI 58 KP +IGTR SPLALA A+ETR L +P I+ + T GD +R L EI Sbjct: 9 TKPLKIGTRGSPLALAQAYETRDRLAAAFDLPETAFEIVVIKTTGDDRAMIAADRPLKEI 68 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G KGLFT EIE +L++G ID AVHS KDMPT+ GL + YLPRED RD FIS + Sbjct: 69 GNKGLFTREIEDQLLNGGIDLAVHSMKDMPTEQPPGLTLDCYLPREDTRDAFISLGGGGI 128 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 LA +V+GTSSLRRKA LL R D++V++FRG ++TRL KL + A A LA AGI R Sbjct: 129 HGLAEGAVVGTSSLRRKAQLLNRRPDLNVVEFRGNVQTRLTKLRDGVAEATFLAMAGITR 188 Query: 179 LKK-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 L ++V + + ED P+ QGAI IE ++ ++++ I+H T + ER+FL Sbjct: 189 LGMLDEVPHDAIAPEDMLPAIAQGAIGIERRSHDTNVADMLEAIHHGGTERRLAAERSFL 248 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 A LDGSC++ IAG A G TL G +L +DG +G D ++GR AQ + Sbjct: 249 ATLDGSCETPIAGLAEIDGGTLRLRGEILRTDGSEALADEISGAVEDGPDMGRALAQKLL 308 Query: 298 FISNKNVFNF 307 + + F++ Sbjct: 309 SRAGPDFFDW 318 >gi|254483263|ref|ZP_05096495.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2148] gi|214036486|gb|EEB77161.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2148] Length = 310 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 109/306 (35%), Positives = 160/306 (52%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A R +LM H P + ++ ++++GD++ + L ++GG Sbjct: 1 MPTRTLTIATRESPLALWQAEYVRDALMSAH--PRLEVNLLGMTSRGDQLLDVPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED D F+S+ +SL Sbjct: 59 KGLFVKELETALLDGSADIAVHSMKDVPMSFPEGLTLGVICEREDPTDAFVSNNFESLAQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ V RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSVVGTSSLRRECQLRARRPDLQVKFLRGNVNTRLRKLDEGQYDAIILASAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I + ++++D P+ GQGA+ IE + EL++ ++H T V ERA L Sbjct: 179 FGERIADSISVDDSLPAGGQGAVGIELREGDGDVLELLQTVHHPLTAQRVIAERAMNQRL 238 Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ IA FA L G+V DG + DA N+G A + Sbjct: 239 NGGCQVPIACFAEYLDNGHLRLRGLVGRPDGSEVLRAEAISSPEDAENLGISVANELLVQ 298 Query: 300 SNKNVF 305 + Sbjct: 299 GAAAIL 304 >gi|30248604|ref|NP_840674.1| porphobilinogen deaminase [Nitrosomonas europaea ATCC 19718] gi|39931498|sp|Q82WS2|HEM3_NITEU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|30180199|emb|CAD84501.1| Porphobilinogen deaminase [Nitrosomonas europaea ATCC 19718] Length = 308 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 164/306 (53%), Gaps = 3/306 (0%) Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M K I +R S LAL A R L++++ P +I I+ ++TKGD+I + +L++IG Sbjct: 1 MSSPKKIVIASRESQLALWQANFIRGRLLELY--PQTDITILGMTTKGDQILDVSLSKIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E L G D AVHS KD+P + G ++A RED RD F+S+ SL+ Sbjct: 59 GKGLFIKELELALEDGRADIAVHSMKDVPMIVPSGFTLAAITEREDPRDAFVSNDFSSLE 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L SV+GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL Sbjct: 119 ELPAGSVVGTSSLRRESQLRARFPHLQVRPLRGNVQTRLRKLDEGEYSAIILAAAGLKRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I +L E P+ GQGA+ IE N+P E +K ++H T V ERA Sbjct: 179 ELGYRISMLLPPELSLPAVGQGALGIECRDNDPDMVEWMKPLHHAATACCVEAERAMSRM 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L GSC+ + GFA L G V DG G +G+ AQ ++ Sbjct: 239 LGGSCQVPLGGFAEIFEDVLTLRGFVATPDGSRMIADKLCGKPESGEQVGQQLAQNLKAH 298 Query: 300 SNKNVF 305 + + Sbjct: 299 GAEEIL 304 >gi|170078218|ref|YP_001734856.1| porphobilinogen deaminase [Synechococcus sp. PCC 7002] gi|169885887|gb|ACA99600.1| porphobilinogen deaminase [Synechococcus sp. PCC 7002] Length = 321 Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 105/308 (34%), Positives = 160/308 (51%), Gaps = 6/308 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ RIG+R S LAL + R L + P + + T+GD++ + L++IG K Sbjct: 7 SKRTVRIGSRKSQLALVQTYWVRDELQKAY--PEITFEVQTMETQGDKVLDVALSKIGDK 64 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118 GLFT+E+E ++ GE D AVHS KD+PT L +GL + R D D + H + L Sbjct: 65 GLFTQELEDGMLKGETDFAVHSLKDLPTNLPEGLMLGCVTERVDPADALVVNEKHRDKKL 124 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 + L SVIGTSSLRR A L + D RG + TRL KL+ + AI+LA AG++R Sbjct: 125 ETLPSGSVIGTSSLRRLAQLRHHFPHLEFKDIRGNVNTRLAKLDRGEYDAIILAAAGLQR 184 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI-NHEDTWDSVNCERAFL 237 L I +I++ + + GQGA+ IE + + L++ + H ++ D ER+FL Sbjct: 185 LDFGDRIHQIISSDISLHAVGQGALGIECRDGDEEILGLLRPVLEHAESRDRCYAERSFL 244 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +L+G C+ I +G L G+V + DG+ +G+R DA +G + AQ Sbjct: 245 RQLEGGCQVPIGVNTTIEGDRLTLVGMVASLDGQTLIRDEVSGSRADAEKLGIELAQKAI 304 Query: 298 FISNKNVF 305 + Sbjct: 305 AQGADKIL 312 >gi|110678608|ref|YP_681615.1| porphobilinogen deaminase [Roseobacter denitrificans OCh 114] gi|109454724|gb|ABG30929.1| porphobilinogen deaminase [Roseobacter denitrificans OCh 114] Length = 314 Score = 262 bits (669), Expect = 5e-68, Method: Composition-based stats. Identities = 136/303 (44%), Positives = 182/303 (60%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR SPLA+A AFETR+ LM +P + I+ + GD I +R L +IGGKGLF Sbjct: 11 PLKIGTRGSPLAMAQAFETRARLMQAFDLPENAFTIVVIKVTGDMIQDRALKDIGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE+ L+S +ID AVHS KDMPT GL + YLPRED+RD FIS T + + DLA Sbjct: 71 TREIEEDLLSEKIDIAVHSMKDMPTLQPDGLILDTYLPREDVRDAFISPTLKGIADLAQG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRRKA LL R D++V++FRG ++TRL KL + A LA AG+ RLK ++V Sbjct: 131 AVVGTSSLRRKAQLLNRRPDLNVVEFRGNVQTRLKKLADGVAECTFLACAGLSRLKMDEV 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + P+ QGAI IE + + EL+ I+ T + ER FL LDGSC Sbjct: 191 PATPIETDHMLPAVAQGAIGIERRIADTNTAELLSAIHDGPTGQRLAAERNFLLTLDGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A G L G VL DG R+G D +GRD A+ + + + Sbjct: 251 ETPIAGLAELSGDHLRLRGEVLRPDGSEALNGERSGPISDGAAMGRDLAEKLLKRAGPSF 310 Query: 305 FNF 307 F++ Sbjct: 311 FDW 313 >gi|255658552|ref|ZP_05403961.1| hydroxymethylbilane synthase [Mitsuokella multacida DSM 20544] gi|260849356|gb|EEX69363.1| hydroxymethylbilane synthase [Mitsuokella multacida DSM 20544] Length = 315 Score = 262 bits (669), Expect = 5e-68, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 170/306 (55%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ IGTR S LAL A L + P + ++TKGD+I + L +IGG Sbjct: 1 MKNDTIVIGTRSSKLALWQADYVADCLRKRY--PELRVEKKLMTTKGDKILDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ +++G ID AVHS KDMPT++ +GL ISA R D D +S ++L++ Sbjct: 59 KGLFTKELEQDMLAGGIDIAVHSLKDMPTEVPEGLVISAITERFDPGDAVVSPKYRTLEN 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRRKA LL R D+ + D RG + TRL KL AI+LA AG+KRL Sbjct: 119 LPQGAKVGTSSLRRKAQLLHARPDLQISDLRGNVNTRLEKLEREHFDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E+L E P+ GQGA+ IET N+ + + L+ +N E T ERAFLA + Sbjct: 179 FADRITEVLPREMVLPAVGQGALAIETRENDREVRNLIAFLNDEATVACARAERAFLARV 238 Query: 241 DGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ + +A + L+ ++ + DG + + G+ +A ++G A + + Sbjct: 239 EGGCQVPVGVYAVPEAEGRLHVEAVIASLDGARLYRDAAVGSAAEAESLGTALADKLLAM 298 Query: 300 SNKNVF 305 + Sbjct: 299 GGIAIL 304 >gi|254474607|ref|ZP_05087993.1| porphobilinogen deaminase [Ruegeria sp. R11] gi|214028850|gb|EEB69685.1| porphobilinogen deaminase [Ruegeria sp. R11] Length = 320 Score = 262 bits (669), Expect = 5e-68, Method: Composition-based stats. Identities = 132/307 (42%), Positives = 180/307 (58%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A+ETR+ L +P I+ + T GD ++ L E+GG Sbjct: 12 PLKIGTRGSPLALAQAYETRARLAAAFDLPDDAFEIVVIKTTGDNQALIAADKPLKELGG 71 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+SG ID AVHS KDMP + GL + YLPRED+RD FIS + S+ D Sbjct: 72 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVQQPDGLVLDTYLPREDVRDAFISPSLTSIHD 131 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LA +V+GTSSLRR+A LL R D++V+ FRG ++TRL KL+ A LA AG+ RL Sbjct: 132 LAKGAVVGTSSLRRRAQLLHRRPDLNVVQFRGNVQTRLRKLSEGVAECTFLAMAGLNRLA 191 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V + D P+ QGAI IE ++ +A +++ I+ + T + ERAFLA L Sbjct: 192 MADVPANAIETNDMLPAVAQGAIGIERRTSDNRAADMLAAIHDQQTGQRLAAERAFLAAL 251 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A G+TL G VL DG + D +GR A + + Sbjct: 252 DGSCETPIAGLAELDGTTLRLRGEVLRPDGSEAISDDQRCPIEDGAELGRAMAAKLLDQA 311 Query: 301 NKNVFNF 307 + F++ Sbjct: 312 GEGFFDW 318 >gi|114765839|ref|ZP_01444932.1| porphobilinogen deaminase [Pelagibaca bermudensis HTCC2601] gi|114541838|gb|EAU44875.1| porphobilinogen deaminase [Roseovarius sp. HTCC2601] Length = 319 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 131/307 (42%), Positives = 178/307 (57%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A ETR L +P I+ + T GD +R L EIG Sbjct: 11 PLKIGTRGSPLALAQAHETRDRLAAAFDLPQDAFEIVVIKTTGDDRAMIAADRPLKEIGN 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE++L+SG ID AVHS KDMPT+ +GL + YLPRED RD FIS L Sbjct: 71 KGLFTKEIEEQLLSGGIDIAVHSMKDMPTEQPEGLVLDCYLPREDERDAFISPGHAGLAA 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A A LA AG++R+ Sbjct: 131 LPEGTVVGTSSLRRRAQLLNRRPDLQVVEFRGNVQTRLKKLEDGVAAATFLAMAGLRRMD 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + ++ +D P+ QGAI IE ++ + +++ I+ DT + ER FLA L Sbjct: 191 MTDIPMTAMSPDDMLPAIAQGAIGIERRSDDSRTGDMLAAIHDTDTATRLAAERTFLAAL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A G L G +LA DG H +G D +GR A+ + + Sbjct: 251 DGSCETPIAGLAELDGDRLRLRGEILAPDGSASHAGELSGPAADGPAMGRALAEELLARA 310 Query: 301 NKNVFNF 307 + F + Sbjct: 311 GPDFFAW 317 >gi|297617596|ref|YP_003702755.1| porphobilinogen deaminase [Syntrophothermus lipocalidus DSM 12680] gi|297145433|gb|ADI02190.1| porphobilinogen deaminase [Syntrophothermus lipocalidus DSM 12680] Length = 316 Score = 262 bits (668), Expect = 6e-68, Method: Composition-based stats. Identities = 120/302 (39%), Positives = 173/302 (57%), Gaps = 2/302 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL A L D P H I + TKGD+IT+ L++IG KGLF Sbjct: 10 KVRIGTRGSRLALWQANYVVKRLRDC--FPGHEFEITVIKTKGDKITDVALSKIGDKGLF 67 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+EIE L+ EID AVHS KD+PT L +G++++A L RE+ DV +S SL L Sbjct: 68 TKEIEMALLREEIDIAVHSLKDLPTTLPEGIRLAAVLERENPLDVLLSFKGYSLSGLPRG 127 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGTSSLRR A L R R DI ++ RG +ETR+ K+ + I+LAYAG+KR+ + Sbjct: 128 ARIGTSSLRRTAQLKRLRPDIETVNLRGNVETRIRKMEDEGLDGIVLAYAGVKRMGFLHL 187 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + EIL+ + P+ GQG I +E + A+ELVK +NH+ TW + ERAFL ++G C Sbjct: 188 VTEILHPDQVIPAVGQGVIALEIKEDGKVAEELVKPLNHQPTWAEITAERAFLKAIEGGC 247 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + A + L G+V + DG++ + +G+ A +G + A+ I + ++ Sbjct: 248 QVPCGCHASYQEGYLTVDGLVASLDGQVVYRDRVSGSEAFAQQLGEELARRILAMGGGSL 307 Query: 305 FN 306 Sbjct: 308 LE 309 >gi|260431649|ref|ZP_05785620.1| porphobilinogen deaminase [Silicibacter lacuscaerulensis ITI-1157] gi|260415477|gb|EEX08736.1| porphobilinogen deaminase [Silicibacter lacuscaerulensis ITI-1157] Length = 320 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 130/307 (42%), Positives = 178/307 (57%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A ETR L D +P I+ + T GD +R L EIG Sbjct: 11 PLKIGTRGSPLALAQAHETRQRLCDAFDLPEQAFEIVVIKTTGDNRAMIDADRPLKEIGN 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ ++ G ID AVHS KDMP + +GL + +LPRED+RD FIS S+ D Sbjct: 71 KGLFTKEIEEAMLGGYIDIAVHSTKDMPVEQPQGLVLDTFLPREDVRDAFISPRLNSIHD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A LL R D++V++FRG ++TRL KL + A LA AG++RL Sbjct: 131 LPEGAVVGTSSLRRRAQLLYRRPDLNVVEFRGNVQTRLKKLADGVAECTFLAMAGLRRLN 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + V ++ +D P+ QG I IE ++ +A E+++ I+H +T + ERA LA L Sbjct: 191 MQDVPATAISPDDMLPAIAQGTIGIERRADDHRAAEMLEAIHHPETAQRLAAERALLAAL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A L G VL DG + G DA +GR A + + Sbjct: 251 DGSCETPIAGLAEITDGQLRLRGEVLRPDGSESVVSEQMGATEDATEMGRAMASDLLRQA 310 Query: 301 NKNVFNF 307 F + Sbjct: 311 GPGFFEW 317 >gi|114566228|ref|YP_753382.1| hydroxymethylbilane synthase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122318683|sp|Q0AZ43|HEM3_SYNWW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|114337163|gb|ABI68011.1| hydroxymethylbilane synthase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 306 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 123/303 (40%), Positives = 176/303 (58%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LAL A S L IP + I + T GD+I + L++IG KG Sbjct: 1 MRNLRLGTRGSQLALWQARHVASLLES--SIPDLKVEIKTIKTTGDKILDVALSKIGDKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+EIEK+L+ GEID AVHS KD+P++L GL I+A L RED RDV +SH SL DL Sbjct: 59 LFTKEIEKELLDGEIDIAVHSMKDLPSELPPGLCIAAVLEREDPRDVLLSHKNYSLADLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++IGTSSLRR A L WR D+ ++D RG +ETR+ K+ I+LA AG+KRL E Sbjct: 119 QAALIGTSSLRRIAQLKAWRPDLQLVDMRGNVETRIRKMKEQDLDGIILACAGVKRLGLE 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++I + L P+ GQG I +E + +L+ INH+D++ + ER FL EL G Sbjct: 179 EMISDYLPAHLVLPAVGQGMIAVEARSDEQDVLKLLSRINHQDSFLAGQAERGFLHELGG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ +A A +G L+ G++ + DGK + S + + +A GR+ A+ + Sbjct: 239 GCQVPVASLAELQGGQLHIRGLIASLDGKEKYSGSSDCSPPEAEEAGRELARSLLQQGGA 298 Query: 303 NVF 305 + Sbjct: 299 AIL 301 >gi|323141796|ref|ZP_08076663.1| hydroxymethylbilane synthase [Phascolarctobacterium sp. YIT 12067] gi|322413719|gb|EFY04571.1| hydroxymethylbilane synthase [Phascolarctobacterium sp. YIT 12067] Length = 306 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 113/304 (37%), Positives = 173/304 (56%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K IGTR S LAL + + L + P +V+ + TKGDRI + L +IGGK Sbjct: 1 MKAKLTIGTRQSLLALWQSNHIAALLRKEY--PECEVVLKKIVTKGDRILDVPLAQIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT+EIE+ L+ G +D AVHS KDMPT L +GL ++A R ++ D F+S+ + ++L Sbjct: 59 GLFTKEIEEDLLDGTVDLAVHSLKDMPTVLPEGLCLTAITERANVGDAFVSNKYATFEEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 L SV+GTSSLRRKA LL R D+ + D RG ++TRL KL+ AI+LA AG++RL Sbjct: 119 PLGSVVGTSSLRRKAQLLAKRPDLEIRDLRGNVDTRLRKLDEGLYDAIILAAAGLERLGH 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I ++ + P+ GQGA+ IE + + ++++ +N +T + + ERAFL L+ Sbjct: 179 GDRISSLIPADVCLPAVGQGALAIEARTADKEVRDMLSFLNDLNTKQATDAERAFLGLLE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I A +G + I+ A DG + NG DA+++G+ + + Sbjct: 239 GGCQVPIGVHADVEGENIRIEAIIAALDGSTILRDTINGKADDAVSLGQQLGKKMLAAGG 298 Query: 302 KNVF 305 + + Sbjct: 299 QEIL 302 >gi|119386338|ref|YP_917393.1| porphobilinogen deaminase [Paracoccus denitrificans PD1222] gi|166217779|sp|A1B853|HEM3_PARDP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|119376933|gb|ABL71697.1| porphobilinogen deaminase [Paracoccus denitrificans PD1222] Length = 313 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 130/305 (42%), Positives = 179/305 (58%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + P RIGTR S LALA A ETR LM H + I+ + T GDR+ +R L EIGGKG Sbjct: 8 QNPIRIGTRGSALALAQAHETRDRLMAAHGLAADAFRIVVIKTTGDRVLDRPLKEIGGKG 67 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT EIE L++ EID AVHS KDMPT +GL I YLPRED+RD F+S ++ +L Sbjct: 68 LFTREIEDALLAHEIDIAVHSMKDMPTIQPEGLVIDCYLPREDVRDAFVSAQFAAISELP 127 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+G+SSLRR+A L R D+ +++FRG ++TRL KL + A A LA AG+ RL Sbjct: 128 QGAVVGSSSLRRRAQLAARRPDLKLVEFRGNVQTRLKKLEDGVAVATFLAMAGLTRLGML 187 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V + + ++ P+ QG I +E ++ + L+ I+ D+ V ERAFLA LDG Sbjct: 188 HVARGAVEPDEMLPAVAQGCIGVERRADDARTASLLAAISDRDSALRVTAERAFLARLDG 247 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC++ IAG A +G L G +L DG R G D +G D A+ +R + Sbjct: 248 SCQTPIAGLAELQGDRLRLRGEILRPDGSEVIAAERVGPAADGAAMGTDLAEELRGRAPA 307 Query: 303 NVFNF 307 + F++ Sbjct: 308 DFFDW 312 >gi|300024951|ref|YP_003757562.1| porphobilinogen deaminase [Hyphomicrobium denitrificans ATCC 51888] gi|299526772|gb|ADJ25241.1| porphobilinogen deaminase [Hyphomicrobium denitrificans ATCC 51888] Length = 310 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 138/305 (45%), Positives = 184/305 (60%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ RIGTR SPLALA A E R L H + I I + T GDR+T+R L++IGG Sbjct: 1 MQAARIRIGTRGSPLALAQAHEVRDRLAKAHGLSEDAISITIIKTTGDRVTDRPLSDIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE L + EID AVHS KDM T+L GL + A LPRED RD FIS ++ Sbjct: 61 KGLFTKEIEDALFAREIDIAVHSMKDMQTELPDGLALGAVLPREDPRDAFISLKHANISA 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRRK+ +L R D+SVIDFRG +ETRL KL + A A LA AG+ RL Sbjct: 121 LPTGAIVGTSSLRRKSQVLSIRPDLSVIDFRGNVETRLRKLKDGIAEATFLAVAGLNRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I I+ D P+ QGAI +E + +A+ V +N ++ +V ERAFLA L Sbjct: 181 LSDRITAIVPSADMLPAAAQGAIGLEIRTGDKEAEAFVAPLNDVNSQRAVTAERAFLARL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +GSC++ IA A G L F G VL+ DG+ ++VSR+G + +IG AA + + Sbjct: 241 EGSCRTPIAAHATIDGEQLSFRGQVLSLDGQQKYDVSRSGAANASRDIGLAAADEVLSKA 300 Query: 301 NKNVF 305 + + Sbjct: 301 DPALL 305 >gi|89056336|ref|YP_511787.1| porphobilinogen deaminase [Jannaschia sp. CCS1] gi|88865885|gb|ABD56762.1| porphobilinogen deaminase [Jannaschia sp. CCS1] Length = 318 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 128/307 (41%), Positives = 181/307 (58%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P RIGTR SPLALA A ETR+ LM +P I+ + T GD + L E+GG Sbjct: 11 PLRIGTRGSPLALAQARETRARLMAAWDLPEDAFEIVVIKTTGDDRSLIDADVALKELGG 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ +++ ID AVHS KDMPT GL + YLPRED+RD F+S L Sbjct: 71 KGLFTKEIEEDMLTSSIDIAVHSMKDMPTVQPDGLMLDCYLPREDVRDAFVSVNHDGLHA 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++G+SSLRR+A L R D++V++FRG ++TR+ KL A A LA AG++RL Sbjct: 131 LPEGAIVGSSSLRRRAQLFARRPDLNVVEFRGNVQTRMKKLGGGVADATFLAMAGLRRLG 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+V+K + +ED P+ QGAI IE V++ +A +++ I++ +T + ER+FL L Sbjct: 191 MEEVVKSAIEVEDMLPAVAQGAIGIERRVSDTRAGDMLAAIHNTETGQRLAAERSFLKGL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IA A G TL G +L DG R D +G D A+ +R + Sbjct: 251 DGSCQTPIAALAELDGGTLRLRGEILRPDGSEVLTDDRTAPIEDGAALGADMARDLRARA 310 Query: 301 NKNVFNF 307 F++ Sbjct: 311 GDGFFDW 317 >gi|254515499|ref|ZP_05127559.1| porphobilinogen deaminase [gamma proteobacterium NOR5-3] gi|219675221|gb|EED31587.1| porphobilinogen deaminase [gamma proteobacterium NOR5-3] Length = 308 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 102/300 (34%), Positives = 166/300 (55%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR SPLAL A+ R +L+ +H P ++ ++ ++++GD+I + L ++GGKGLF Sbjct: 5 VVIATRESPLALWQAYFVRDTLLKMH--PGISVELLGMTSRGDQILDVPLAKVGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G AVHS KD+P + GL+++ RE+ D F+S+ ++L L + Sbjct: 63 KELETALLDGRAHIAVHSMKDVPMEFPDGLELAVICEREEPADAFVSNNYENLDALPPGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ L R D++V RG + TRL KL+ + AI+LA AG+ RL+ + I Sbjct: 123 VVGTSSLRRECQLRANRPDLTVRFLRGNVNTRLRKLDEGEYDAIILACAGLIRLEMGERI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + + + P+ GQGA+ IE ++ +EL+ ++H T + V ERA L G C+ Sbjct: 183 RARIPVTESLPAGGQGAVGIEIRSDDSATRELLAPLHHGPTAERVLAERALNRRLQGGCE 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IA +A +G L+ G+V DG G+R + +G A + + Sbjct: 243 VPIAAYAVHEGDQLWLRGLVGRPDGSNTLRADARGSRDNPEALGITVADALLEAGAAEIL 302 >gi|113952874|ref|YP_731239.1| porphobilinogen deaminase [Synechococcus sp. CC9311] gi|122945597|sp|Q0I8I3|HEM3_SYNS3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|113880225|gb|ABI45183.1| porphobilinogen deaminase [Synechococcus sp. CC9311] Length = 316 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 102/308 (33%), Positives = 156/308 (50%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALEHLRIASRRSQLAMVQTNWVKAELEKAH--PGLAISVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + ++ + Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNSKNAEYT 118 Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L S++GTSSLRR A L + D RG + TRL KL++ ++LA AG+ Sbjct: 119 LETLPEGSIVGTSSLRRLAQLRYHYPHLQFKDVRGNVITRLEKLDSGNYDCLILAAAGLS 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I + + + GQGA+ IE + P+ EL++V+NH T ERAFL Sbjct: 179 RLGFGDRIHQSIPGNISLHAVGQGALGIECVCDRPEVMELIQVLNHAPTSARCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L+G C+ I +G T+ G+V + DGK + G D +GRD A ++ Sbjct: 239 RVLEGGCQVPIGVNTQIEGDTIQLTGMVASLDGKRLIRDEQAGPLADPEAVGRDLAHKLK 298 Query: 298 FISNKNVF 305 + Sbjct: 299 DQGAGEIL 306 >gi|159903036|ref|YP_001550380.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9211] gi|238058998|sp|A9BEB6|HEM3_PROM4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|159888212|gb|ABX08426.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9211] Length = 316 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 105/308 (34%), Positives = 161/308 (52%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR S LA+ + L H P NI I ++T+GD+I + L +IG Sbjct: 1 MVLDQLRIATRRSKLAMVQTHWVKEQLEKAH--PGINISIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117 KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + + + Sbjct: 59 KGLFTKELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVNKSLKDKQ 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L +L +++GTSSLRR A L + D RG + TRL KL+ ++LA AG+ Sbjct: 119 LHELPPGTILGTSSLRRLAQLRHHYPHLIFKDVRGNLITRLEKLDAGAYDCLILAAAGLT 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL + +++ E + GQGA+ IE N P+ E++K + HE+T ER+FL Sbjct: 179 RLGFGDRVHQLIPCEISLHAVGQGALGIECVENKPEVLEIIKSLEHEETSQRCLSERSFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + G L G+V + DGK + S+ G++ + IG++ A ++ Sbjct: 239 RELEGGCQVPIGVNSQISGQDLILTGMVASLDGKKLIKDSKRGDKSNPELIGKELANELK 298 Query: 298 FISNKNVF 305 + Sbjct: 299 SQGAMEIL 306 >gi|163745168|ref|ZP_02152528.1| porphobilinogen deaminase [Oceanibulbus indolifex HEL-45] gi|161381986|gb|EDQ06395.1| porphobilinogen deaminase [Oceanibulbus indolifex HEL-45] Length = 315 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 132/304 (43%), Positives = 179/304 (58%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P IGTR S LALA A E R L +P I+ + T GD+I +R L EIGGKGL Sbjct: 10 RPLNIGTRGSLLALAQANEVRDRLAAAFDLPFEAFTIVVIKTTGDKIIDRPLKEIGGKGL 69 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT EIE L+ G ID AVHS KDMPT GL I YLPRED+RD FIS +S+ DL Sbjct: 70 FTREIEAALLDGSIDIAVHSMKDMPTLQPGGLVIDTYLPREDMRDAFISPHLKSIADLPE 129 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR+A + R D+ V++FRG ++TRL KL + A A LA AG+ RLK ++ Sbjct: 130 GAVVGTSSLRRRAQVKLRRPDLEVVEFRGNLQTRLKKLEDGVAEATFLAMAGLNRLKMDE 189 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V K ++ +D P+ QGAI IE +++ +A +++ I+ T + + ERAFLA LDGS Sbjct: 190 VPKAAVHTDDMLPAIAQGAIGIERRMDDTRAADMLAAIHDRATGEQLAAERAFLATLDGS 249 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C++ IAG A G+ + G VL DG D GR+ A+ + + Sbjct: 250 CETPIAGLAELNGTNMRLRGQVLRPDGSDAIGDDVTCTISDGAEAGREMARKLLAEAGPG 309 Query: 304 VFNF 307 F++ Sbjct: 310 FFDW 313 >gi|147677307|ref|YP_001211522.1| porphobilinogen deaminase [Pelotomaculum thermopropionicum SI] gi|189028095|sp|A5D3L5|HEM3_PELTS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|146273404|dbj|BAF59153.1| porphobilinogen deaminase [Pelotomaculum thermopropionicum SI] Length = 312 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 112/304 (36%), Positives = 168/304 (55%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ +GTR S LA+ A L ++ P + I+ + T GDRI + L +IG K Sbjct: 1 MKREIAVGTRVSKLAMWQARWVVDRLKEL--CPGCSFRIVGIRTLGDRILDAALVKIGDK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT+E+E ++ GEID AVHS KD+PT+L +GL I A RE DV +S + L +L Sbjct: 59 GLFTKELEAAMLRGEIDMAVHSMKDLPTELPEGLVIGAVCKREHPADVLVSRRGKKLDEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +++GTSSLRR A LL +R D+ +++ RG I TRL KL A +LAYAG+ R+ + Sbjct: 119 PGGALVGTSSLRRCAQLLWYRDDLRMVNLRGNINTRLRKLEEENLDAAVLAYAGLFRMGR 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I +++ + P+ GQG+I +E ++ + ELVK I+H ++ +V ERAFL L+ Sbjct: 179 QDAITQVIPFDICLPAVGQGSIGVEVRSDDGEVLELVKKIDHRESRLAVFAERAFLRRLE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ + + L G+V DGK GN DA IG A+ + + Sbjct: 239 GGCQVPVGALGTVENDRLRLEGVVATPDGKQLVRSFVEGNGGDAAAIGLRLAEKLLELGA 298 Query: 302 KNVF 305 + Sbjct: 299 GEIL 302 >gi|302342250|ref|YP_003806779.1| porphobilinogen deaminase [Desulfarculus baarsii DSM 2075] gi|301638863|gb|ADK84185.1| porphobilinogen deaminase [Desulfarculus baarsii DSM 2075] Length = 310 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 117/301 (38%), Positives = 154/301 (51%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LALA A L + P + + TKGD+I + L ++GGKGLF Sbjct: 3 KLIIATRGSELALAQARWAARQLSALS--PGLEVELQLFKTKGDKILDAPLAKVGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE L+ G AVHS KDMP +L GL I+A RED RDV IS L +L Sbjct: 61 VKEIEDALLDGRARVAVHSMKDMPAELPPGLCIAAVSRREDPRDVLISRDGLGLDELPAT 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +GTSSLRR+A LL R D V+ RG ++TRL KL AI+LA AG+ RL Sbjct: 121 PRLGTSSLRRQAQLLARRPDAMVVSVRGNVQTRLRKLEELGLDAIVLAAAGLDRLGLSDP 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + L E P+ GQGA+ IE ++ EL + H+ T +V ERAFL L+G C Sbjct: 181 RRVDLAPELMLPAVGQGALAIEARADDAFCLELCARLAHQPTAVAVEAERAFLGRLEGGC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + IAG A G + F G+V + DGK G +A +G A+ I + + Sbjct: 241 QVPIAGHAVVDGDEIVFEGLVASLDGKRLIRRRAVGRADEAGPLGLAVAEEILADGGRQI 300 Query: 305 F 305 Sbjct: 301 L 301 >gi|226311390|ref|YP_002771284.1| porphobilinogen deaminase [Brevibacillus brevis NBRC 100599] gi|259647803|sp|C0ZAH1|HEM3_BREBN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226094338|dbj|BAH42780.1| porphobilinogen deaminase [Brevibacillus brevis NBRC 100599] Length = 309 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 109/300 (36%), Positives = 165/300 (55%), Gaps = 5/300 (1%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 ++GTR S LAL L P + + + TKGDRI + TL+++GGKGLF + Sbjct: 5 KVGTRRSKLALTQTNWVVDKLK--GFAPEADFELHEIVTKGDRILDVTLSKVGGKGLFVK 62 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE+ L E D AVHS KDMP +L GL I A R D RDV +S ++L +L ++ Sbjct: 63 EIEQSLFDKETDFAVHSLKDMPAELPDGLVIGAIPKRVDPRDVLLSKDGKTLDELPQGAL 122 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSSLRR + +L +R DI + RG I+TR+ KL AI+LA AG++R+ E I Sbjct: 123 VGTSSLRRSSQILAYRPDIQIESLRGNIDTRMRKLAEGNFDAIILAAAGLERVNFEGEIS 182 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + L +E P+ GQGA+ IE ++ + L+K + T +V+ ER+FL +L G C+ Sbjct: 183 QFLPVEISLPAVGQGALAIECRADDEETLALLKQFDDAPTRLAVSAERSFLHKLQGGCQV 242 Query: 247 AIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 I +A + + + G+V + DGK + + G D + +G A+ + +V Sbjct: 243 PIGAYATVGENNEITLTGMVGSPDGKQMFKNTATG--QDPLALGIQVAEALLAQGAGDVL 300 >gi|282901179|ref|ZP_06309108.1| Porphobilinogen deaminase [Cylindrospermopsis raciborskii CS-505] gi|281193879|gb|EFA68847.1| Porphobilinogen deaminase [Cylindrospermopsis raciborskii CS-505] Length = 322 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 109/306 (35%), Positives = 159/306 (51%), Gaps = 5/306 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + + L + P + + +ST+GD+I + L +IG KGL Sbjct: 9 RIIRIGSRKSELALVQTYWVQEQLQKSY--PDIDFQVHTMSTQGDKILDVALAKIGDKGL 66 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-- 121 FT+E+E +I+ EID AVHS KD+PT L +GL ++A RE+ D + H + L Sbjct: 67 FTKELELGMINQEIDFAVHSLKDLPTNLPEGLTLAAITERENPADAVVFHQNHLGQTLAT 126 Query: 122 -ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 SVIGTSSLRR A L + D RG + TR+ KL+ + A++LA AG++RL Sbjct: 127 LPPGSVIGTSSLRRLAQLRHKFPHFTFKDVRGNLNTRMTKLDAGEYDALILAVAGLERLN 186 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I EIL + + GQGA+ IE N+ + ++K I H T D ER+FL L Sbjct: 187 MHHRIHEILPPDISLHAVGQGALGIECRENDLELITILKAIEHPQTRDRCLAERSFLRSL 246 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I G TL GIV + +G+ + + G DA +G A +R Sbjct: 247 EGGCQVPIGVNTEIDGETLTLTGIVASVNGENLVKNTITGAATDAEKLGTQLANILREQG 306 Query: 301 NKNVFN 306 + Sbjct: 307 ATEILE 312 >gi|304436298|ref|ZP_07396276.1| hydroxymethylbilane synthase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370703|gb|EFM24350.1| hydroxymethylbilane synthase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 311 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M IGTR S LAL A ++ H P + + L+TKGDRI + L +IGG Sbjct: 1 MNSGTITIGTRASKLALWQANYVAEAIKKEH--PSCCVELRELTTKGDRILDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ ++ +D AVHS KDMPT++ GL I A R D D F+S +++D Sbjct: 59 KGLFTKELEQAMLDDAVDLAVHSLKDMPTEIPDGLVIGAITTRLDPGDAFVSAHYAAVED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + + +GTSSLRR+A LL R D+++ D RG + TRL KL+ + AI+LA AG+KRL Sbjct: 119 LPVGARVGTSSLRRRAQLLAVRPDLTICDLRGNVNTRLAKLDAGEFDAIVLAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I+ IL P+ GQGA+ IE + ++ + + ERAFL + Sbjct: 179 FERRIRTILPRSVMLPAVGQGALAIECRAGDAAILSAIEFLRDAGMTTAAQAERAFLRRV 238 Query: 241 DGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ + +A + ++ + DG+ +G A +G A+ + Sbjct: 239 EGGCQIPVGVYAEVDANGQISIDAMIASVDGQRICRSDAHGAGEQAEALGTALAEELLDA 298 Query: 300 SNKNVF 305 + + Sbjct: 299 GGREIL 304 >gi|149199469|ref|ZP_01876504.1| Prolyl 4-hydroxylase, alpha subunit [Lentisphaera araneosa HTCC2155] gi|149137404|gb|EDM25822.1| Prolyl 4-hydroxylase, alpha subunit [Lentisphaera araneosa HTCC2155] Length = 307 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 112/301 (37%), Positives = 167/301 (55%), Gaps = 3/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR S LAL A +S L++V P I + + T+GD+I + +L +IGGKGLF Sbjct: 2 KLRIATRGSQLALWQAEHVKSRLLEV--DPSLEIELKIIKTQGDKILDVSLAKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE+ ++ E D AVHS KD+P +L +GL + A L RED RD F+S+ +SL +L Sbjct: 60 VKEIEQAMMDDEADLAVHSMKDVPAELPEGLILQAILEREDPRDAFVSNKYKSLDELPEG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR + L R + RG + TRL KL+++K AI+LA AG+ RL+ Sbjct: 120 AVVGTSSLRRASQLYRQYP-VKTELLRGNVNTRLAKLDDDKYDAIILAAAGLIRLEFGDR 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + L+ + F PSPGQGA+ IE ++ + L+ +NH +T V ER F + GSC Sbjct: 179 IADSLDPDKFIPSPGQGAVGIECREDDAELCALLNKLNHTETSIRVKVEREFNLAIGGSC 238 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A G + V + DGK ++ +G+ D G + A + + Sbjct: 239 QVPAGCYATIDGDSFELRAFVASPDGKEYYREDMSGDLKDLPGKGTEIANKLIARGAAEI 298 Query: 305 F 305 Sbjct: 299 I 299 >gi|163733941|ref|ZP_02141383.1| porphobilinogen deaminase [Roseobacter litoralis Och 149] gi|161393052|gb|EDQ17379.1| porphobilinogen deaminase [Roseobacter litoralis Och 149] Length = 314 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 135/303 (44%), Positives = 181/303 (59%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR SPLA+A AFETR+ LM +P I+ + GD I +R L +IGGKGLF Sbjct: 11 PLKIGTRGSPLAMAQAFETRARLMQAFDLPEDAFSIVVIKVTGDMIQDRALKDIGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE+ L+S +ID AVHS KDMPT GL + YLPRED+RD F+S T + DLA Sbjct: 71 TREIEEDLLSEKIDIAVHSMKDMPTLQPDGLVLDTYLPREDVRDAFVSPTLSGIADLAQG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRRKA LL R D++V++FRG ++TRL KL + A LA AG+ RLK ++V Sbjct: 131 AVVGTSSLRRKAQLLNRRPDLNVVEFRGNVQTRLKKLADGVAECTFLASAGLNRLKMDEV 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + ++ P+ QGAI IE + + +L+ I+H +T + ER+FL LDGSC Sbjct: 191 PATPIEADEMLPAVAQGAIGIERRMADQNTADLLSAIHHIETGQRLTAERSFLLTLDGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A G L G VL DG R+G D +GR AQ + + Sbjct: 251 ETPIAGLAELDGDQLRLRGEVLRPDGSESLAGERSGPIADGAEMGRILAQELLDRAGPKF 310 Query: 305 FNF 307 F + Sbjct: 311 FEW 313 >gi|282895464|ref|ZP_06303601.1| Porphobilinogen deaminase [Raphidiopsis brookii D9] gi|281199497|gb|EFA74360.1| Porphobilinogen deaminase [Raphidiopsis brookii D9] Length = 322 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 109/306 (35%), Positives = 160/306 (52%), Gaps = 5/306 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + + L + P + + +ST+GD+I + L +IG KGL Sbjct: 9 RTIRIGSRKSELALVQTYWVQEQLQKSY--PDIDFQVHTMSTQGDKILDVALAKIGDKGL 66 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLKD 120 FT+E+E +I+ EID AVHS KD+PT L GL ++A RE+ D + H +L Sbjct: 67 FTKELELGMINQEIDFAVHSLKDLPTNLPAGLTLAAITARENPADAVVFHQNHLGQTLDT 126 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SVIGTSSLRR A L S + D RG + TR+ KL+ + A++LA AG++RL Sbjct: 127 LPPGSVIGTSSLRRLAQLRHKFSHFTFKDVRGNLNTRMTKLDAGEYDALILAVAGLERLN 186 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +IL + + GQGA+ IE N+ + ++K I H T D ER+FL L Sbjct: 187 MHHRIHQILPPDISLHAVGQGALGIECRENDSELITILKAIEHPQTRDRCLAERSFLRSL 246 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I G +L GIV + +G+ + + G DA +G A +R Sbjct: 247 EGGCQVPIGVNTEIDGESLTLTGIVASVNGENLVKNTITGAAADAEKLGTQLANILREQG 306 Query: 301 NKNVFN 306 + Sbjct: 307 ATEILE 312 >gi|126732359|ref|ZP_01748159.1| porphobilinogen deaminase [Sagittula stellata E-37] gi|126707228|gb|EBA06294.1| porphobilinogen deaminase [Sagittula stellata E-37] Length = 316 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 137/309 (44%), Positives = 185/309 (59%), Gaps = 4/309 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEI 58 P +IGTR SPLALA AFETR LM +P I + T GD +R L EI Sbjct: 7 NSPLKIGTRGSPLALAQAFETRERLMAAFSLPEDAFEICIIKTTGDDRAMIAADRPLKEI 66 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G KGLFT+EIE+ L++G ID AVHS KDMPT+ +GL + YLPRED RD FI H S+ Sbjct: 67 GNKGLFTKEIEEALVAGRIDIAVHSMKDMPTEQPEGLILDCYLPREDPRDAFICHDHGSI 126 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 DL + +V+G+SSLRR+A LL R D+ V++FRG ++TRL KL++ A A LA AG+ R Sbjct: 127 HDLPVGAVVGSSSLRRRAQLLHRRPDLDVVEFRGNLQTRLKKLSDGVATATFLACAGLNR 186 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 +K V + D P+ QGAI IE +++ QE++ I+ DT + ERAFLA Sbjct: 187 MKIPGVPMFPIAEVDMLPAIAQGAIGIERRIDDATTQEMLAAIHDHDTGLRLAAERAFLA 246 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 LDGSC++ IAG A G+TL+ G +L DG I H +G + +GR A + Sbjct: 247 RLDGSCETPIAGLAELDGATLHLRGEILRPDGSISHAGEISGAATEGAALGRTLADDLLS 306 Query: 299 ISNKNVFNF 307 + + F++ Sbjct: 307 RAGEGFFDW 315 >gi|269103733|ref|ZP_06156430.1| porphobilinogen deaminase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163631|gb|EEZ42127.1| porphobilinogen deaminase [Photobacterium damselae subsp. damselae CIP 102761] Length = 294 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 162/290 (55%), Gaps = 2/290 (0%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + A ++ L H P + ++P+ TKGD I + L ++GGKGLF +E+E ++ G Sbjct: 1 MWQAEFVKAELEKAH--PGLVVELVPMVTKGDVILDTPLAKVGGKGLFVKELEVAMLEGR 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 D AVHS KD+P + +GL + RED RD F+S+ SL++L S++GTSSLRR+ Sbjct: 59 ADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNRYNSLEELPQGSIVGTSSLRRQC 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 L R D+ V D RG + TRL KL++ + AI+LA AG+KRLK + I+ + E P Sbjct: 119 QLRSQRPDLIVKDLRGNVNTRLRKLDDGEYDAIILACAGLKRLKMDDRIRAAIAPETSLP 178 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + GQGA+ IE +++ + ++L+ +NH++T V CERA L G C+ I +A +G Sbjct: 179 AVGQGAVGIECRLDDTRVRDLLAALNHQETATRVLCERAMNNRLQGGCQVPIGSYAELQG 238 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 ++ +V DG +G+ DA +G A+ + K + Sbjct: 239 DQIWLRALVGEPDGSQIVRGEISGSANDAEALGTQLAEQLLADGAKPILE 288 >gi|153004241|ref|YP_001378566.1| porphobilinogen deaminase [Anaeromyxobacter sp. Fw109-5] gi|152027814|gb|ABS25582.1| porphobilinogen deaminase [Anaeromyxobacter sp. Fw109-5] Length = 313 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 105/300 (35%), Positives = 150/300 (50%), Gaps = 3/300 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLA A L K P + + L TKGDRI L E+GGKGLF Sbjct: 2 IRIATRRSPLAKWQANHVADLLRA--KEPGLEVRLHELVTKGDRILEVPLAEVGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ + + AVHS KD+P +L GL I A RED RD S ++L L + Sbjct: 60 KEIEDALLASDAEIAVHSMKDLPAELAPGLAIGAVPEREDPRDALCSPRYKTLAGLPRGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR A L R D+ + RG +ETRL K + A++LAYAG++RL + Sbjct: 120 KVGTSSLRRGAQLKALRPDLQLEMVRGNVETRLRKA-SEALDAVVLAYAGLRRLGLAEHA 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + E+ P+ QGA+ +E + + + H +T + ER FL ++G C+ Sbjct: 179 TYVFPAEEMLPAVAQGALALEARAADAPTMARLAALEHPETRVRIEAERGFLGRIEGGCQ 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IAG A +G + +V + DG R+G DA +G A+ + + Sbjct: 239 VPIAGHATVQGGRVSMRALVASLDGTRVIRGERSGPAADARQLGIALAEELLSKGAAEIL 298 >gi|260888475|ref|ZP_05899738.1| hydroxymethylbilane synthase [Selenomonas sputigena ATCC 35185] gi|330838215|ref|YP_004412795.1| Porphobilinogen deaminase [Selenomonas sputigena ATCC 35185] gi|260861672|gb|EEX76172.1| hydroxymethylbilane synthase [Selenomonas sputigena ATCC 35185] gi|329745979|gb|AEB99335.1| Porphobilinogen deaminase [Selenomonas sputigena ATCC 35185] Length = 311 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 173/305 (56%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+K IGTR S LAL A + L + + P ++V ++TKGDR+ + L +IGG Sbjct: 1 MKKDTIVIGTRSSKLALWQADYVEAKLRERY--PELHVVQKRMTTKGDRVLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ +++GEID AVHS KDMPT+L +GL ++A R D D +S Q+L + Sbjct: 59 KGLFTKELEQAMLAGEIDLAVHSLKDMPTELPEGLMLAAVTERFDPGDAVVSPRYQTLAN 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+A LL R D+ ++ RG + TRL KL AI+LA AG+KRL Sbjct: 119 LPQGAKVGTSSLRRRAQLLAKRPDLEIVSLRGNVNTRLKKLEEENFDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I EIL E P+ GQGA+ IE ++ L+ ++ T + ERAFLA + Sbjct: 179 FHDRITEILPREICLPAVGQGALAIEARADDEATLSLIAFLDDAATRAAARAERAFLARV 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ + +A L ++ + DG+ + + G+ DA IGR A+ + + Sbjct: 239 EGGCQVPVGVYAEAADEALEMEAVIASIDGERLYRKKKAGSALDAEKIGRALAEELLAMG 298 Query: 301 NKNVF 305 K + Sbjct: 299 GKEIL 303 >gi|162219161|ref|YP_747258.2| porphobilinogen deaminase [Nitrosomonas eutropha C91] Length = 308 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 165/306 (53%), Gaps = 3/306 (0%) Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + I +R S LAL A RS L++++ P +I I+ ++TKGD+I + +L++IG Sbjct: 1 MSSPEKIVIASRESQLALWQANFIRSRLLELY--PQTDITILGMTTKGDQILDVSLSKIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E L G D AVHS KD+P + G +++A RED RD F+S+ SL+ Sbjct: 59 GKGLFIKELELALEDGRADIAVHSMKDVPMIVPSGFRLAAITEREDPRDAFVSNDFTSLE 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L SV+GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL Sbjct: 119 ELPTGSVVGTSSLRRESQLRARFPHLQVRPLRGNVQTRLRKLDEGEYSAIILAAAGLKRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I ++ E P+ GQGA+ IE N+P E +K ++H T V ERA Sbjct: 179 ELGYRISMLIPPELSLPAVGQGALGIECRDNDPDMVEWMKPLHHATTAYCVEAERAMSRV 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L GSC+ + GFA L G V DG G +G AQ ++ Sbjct: 239 LGGSCQVPLGGFAEIFEGVLTLRGFVATPDGSKIIADKLCGKPESGERVGEQLAQNLKTH 298 Query: 300 SNKNVF 305 + + Sbjct: 299 GAEEIL 304 >gi|313673928|ref|YP_004052039.1| hydroxymethylbilane synthase [Calditerrivibrio nitroreducens DSM 19672] gi|312940684|gb|ADR19876.1| hydroxymethylbilane synthase [Calditerrivibrio nitroreducens DSM 19672] Length = 308 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 108/306 (35%), Positives = 157/306 (51%), Gaps = 4/306 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK I TR S LAL A +S L ++ P + + + T+GD I + L +IGG Sbjct: 1 MEK--ITIATRGSKLALWQANHIKSLLT--NRYPEMLVELKIIKTQGDIILDVPLAKIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE LI E D AVHS KD+P +L L+I RE D F+S +L + Sbjct: 57 KGLFVKEIENALIENEADLAVHSMKDVPVELPDELEIYVNPHRESPFDAFLSVKYNNLDE 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRRK + R R DI + D RG ++TR+ KL AI+LA AG+ RL Sbjct: 117 LPRGAKLGTSSLRRKVQISRIRPDIEITDLRGNVDTRIRKLTEGTFDAIILARAGLNRLN 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + K + + PS QG + IE ++ + + ++K + E T ERAFL L Sbjct: 177 LLEWAKYTFDDSEIVPSVCQGTLGIEVRKDDDRIKNILKFMKDEKTEIVTRAERAFLRRL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C++ I G+ +G L G + + DG F + G+ +G A+ I Sbjct: 237 EGGCQAPIGGYCKIEGGKLKMIGFLSSLDGDEFLKYEEYGDMDKPEVLGESVAEKILING 296 Query: 301 NKNVFN 306 K + + Sbjct: 297 GKKILD 302 >gi|22299189|ref|NP_682436.1| porphobilinogen deaminase [Thermosynechococcus elongatus BP-1] gi|39931549|sp|Q8DIE4|HEM3_THEEB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|22295371|dbj|BAC09198.1| porphobilinogen deaminase [Thermosynechococcus elongatus BP-1] Length = 320 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 103/308 (33%), Positives = 156/308 (50%), Gaps = 5/308 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +P RIG+R S LAL ++ L H+ ++ ++T+GD I + L +IG K Sbjct: 5 SSRPVRIGSRKSQLALVQTEWVQAQLQTHHR--DRAFEVVTMTTQGDNILDVALAKIGDK 62 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT+E+E ++ GE D AVHS KD+PT+L GL ++A RED D + + + Sbjct: 63 GLFTKELELSMLRGETDLAVHSLKDLPTQLPDGLVLAAITEREDPADALVLGAKWTGHTI 122 Query: 122 ---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +VIGTSSLRR A L + ++ D RG + TRL KL+ + A++LA AG++R Sbjct: 123 DTLPEGTVIGTSSLRRLAQLRHYYPHLTFKDVRGNLNTRLAKLDAGEYDALILAVAGLRR 182 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L I ++L + GQGA+ IE + LVK + H +T ERAFL Sbjct: 183 LGFGDRISQVLPATVSLYAVGQGALGIECRAEDADILALVKTLEHPETTARCLAERAFLR 242 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +L+G C+ I + L G+V + DG+ + S G+ A +G A +R Sbjct: 243 QLEGGCQVPIGVHTVIENGQLTLTGLVASLDGQRLVKDSLTGDVATAEELGTRLALKLRE 302 Query: 299 ISNKNVFN 306 + Sbjct: 303 QGASEILE 310 >gi|90421073|ref|ZP_01228976.1| porphobilinogen deaminase [Aurantimonas manganoxydans SI85-9A1] gi|90334708|gb|EAS48485.1| porphobilinogen deaminase [Aurantimonas manganoxydans SI85-9A1] Length = 311 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 141/307 (45%), Positives = 190/307 (61%), Gaps = 1/307 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR S LA A A E R+ LM H +P I +ST GDRI +R L+E+GG Sbjct: 1 MASDIIRIGTRGSQLAKAQASEVRARLMAAHDLPEEAFEIEVISTTGDRILDRPLSEVGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE LI G +D A HS+KDM T +GL++SAYLPRED+RD FI TA ++ + Sbjct: 61 KGLFTKEIEAALIDGRVDIAAHSSKDMATASPEGLEVSAYLPREDVRDAFIGRTAATIDE 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IG++SLRR++LL R R D+ VI FRG +++RL KL + A LLA AG+ R+ Sbjct: 121 LPHGATIGSASLRRQSLLKRMRPDLKVITFRGNVQSRLRKLEEGQVDATLLALAGLNRMA 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + V EIL +E F P+PGQGAICI+ + + + LV I T ++ ERAFLAEL Sbjct: 181 MQDVATEILEVERFLPAPGQGAICIQNRIGDERVHGLVAAIADPRTTVALTAERAFLAEL 240 Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DGSC++ IA A + T+ +G++L DG HE R G DA +GR A + + Sbjct: 241 DGSCRTPIAAHAVLAEDGTVTLHGMILTPDGSRMHETRRTGIAADAEALGRLAGRDVLDA 300 Query: 300 SNKNVFN 306 + F+ Sbjct: 301 AGPGFFD 307 >gi|113460193|ref|YP_718250.1| porphobilinogen deaminase [Haemophilus somnus 129PT] gi|170718229|ref|YP_001785251.1| porphobilinogen deaminase [Haemophilus somnus 2336] gi|123131907|sp|Q0I178|HEM3_HAES1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238058918|sp|B0UWZ8|HEM3_HAES2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|112822236|gb|ABI24325.1| hydroxymethylbilane synthase (porphobilinogen deaminase, PGB) [Haemophilus somnus 129PT] gi|168826358|gb|ACA31729.1| porphobilinogen deaminase [Haemophilus somnus 2336] Length = 321 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 110/317 (34%), Positives = 165/317 (52%), Gaps = 14/317 (4%) Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M K +I TR SPLAL A ++ L + ++ ++P+ TKGD I + L +IG Sbjct: 1 MSINKTLKIATRQSPLALWQANYVKNRLQQRYS--HLSVELVPIITKGDVILDTPLAKIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E L++GE D AVHS KD+P + KGL++S PRED RD F+S+ ++L Sbjct: 59 GKGLFVKELENALLNGEADIAVHSMKDVPMQFPKGLELSVICPREDPRDAFVSNKYRTLD 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +++GTSSLRR+ L WR+D+ + RG + TRLNKL+ AI+LA AG+ RL Sbjct: 119 ELPQGAIVGTSSLRRQCQLKNWRADLDIRSLRGNVGTRLNKLDQGDYDAIILASAGLIRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I+ + I+ P+ GQGA+ IE V++ Q L+ + + T V ERA Sbjct: 179 GLTERIRSFIEIDTILPACGQGAVGIECRVDDRDVQSLLMPLADQTTTYCVLAERAMNFH 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS-----------RNGNRCDAINI 288 L G C+ I +A + + LY G+V G A + Sbjct: 239 LQGGCQVPIGAYAILENNQLYLRGLVGDVHGSQILSAEGQFELSLDFESSQSAVQKAEEL 298 Query: 289 GRDAAQYIRFISNKNVF 305 G A+ + + Sbjct: 299 GVSIAEQLLQQGADKIL 315 >gi|91200437|emb|CAJ73484.1| strongly similar to hydroxymethylbilane synthase (porphobilinogen deaminase) [Candidatus Kuenenia stuttgartiensis] Length = 319 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 106/302 (35%), Positives = 162/302 (53%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 KP +G+R S LAL S L ++ P I +ST GD+IT+ L+ +GG G+ Sbjct: 8 KPIIVGSRGSKLALTQTNWVISELKKLN--PGVEFEIKKISTSGDKITDVPLSRLGGVGV 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E LI +ID AVHSAKD+PT++ + L + A R D DV IS +L+ L Sbjct: 66 FTKELEVALIKEKIDLAVHSAKDIPTEVSEKLTLGAMPKRVDPSDVLISAKNVTLERLPG 125 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++ IGTSSLRRKA LL R D ++D RG ++TRL KL + I++A+AG+ R+ Sbjct: 126 NARIGTSSLRRKAQLLALRPDFEIVDLRGNLDTRLKKLEADDLDGIIVAHAGLIRIGYTG 185 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I EI+ E P+ GQG++ IE ++ + +++ ++ T +V ERA LA+L G Sbjct: 186 QISEIIPFEIMLPAVGQGSLGIEIRKDDERINKILSKMDDLHTRIAVEAERALLAKLQGG 245 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I A ++ ++ DG+ S G A +G + AQ + Sbjct: 246 CQVPIGAHAKVLNDEVHLEAVICTLDGERTIRDSHKGPANQAAAVGNELAQRMLDNGGDK 305 Query: 304 VF 305 + Sbjct: 306 IL 307 >gi|37522781|ref|NP_926158.1| porphobilinogen deaminase [Gloeobacter violaceus PCC 7421] gi|55976479|sp|Q7NGF7|HEM3_GLOVI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|35213783|dbj|BAC91153.1| porphobilinogen deaminase [Gloeobacter violaceus PCC 7421] Length = 328 Score = 260 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 107/311 (34%), Positives = 154/311 (49%), Gaps = 8/311 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + IG+R S LAL R L H P I+ + T+GD+I + L +IG Sbjct: 1 MS-RTVIIGSRDSQLALVQTHWVRDELQRAH--PDIRFEIVEMKTQGDKILDVALAKIGD 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117 KGLFT+E+E ++ D AVHS KD+PT L GL + A RED D I Sbjct: 58 KGLFTKELESAMLEKRTDLAVHSLKDLPTALPPGLILGAITEREDPSDAVIVRRGLEAAG 117 Query: 118 LKDLALHSVIGTSSLRRKALLLRWR-SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L DL +V+GTSSLRR A L + D RG + TRL KL+ + AI+LA AG+ Sbjct: 118 LADLPEGAVVGTSSLRRLAQLKHHYGERLRFQDIRGNLNTRLRKLDEGRYDAIVLAVAGM 177 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 +RL + I E+L+ + + GQGA+ IE + + +L+ V+NH T ERA Sbjct: 178 RRLGWSERISEVLSPDISLHAVGQGALGIECREADGEILDLLTVLNHPPTARRCRAERAM 237 Query: 237 LAELDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 L L+G C+ I + L GIV + DG+ R+G +GR A+ Sbjct: 238 LRALEGGCQVPIGVYTELDDSGRLTLQGIVASLDGRNMARACRSGPGDAPEALGRAVAED 297 Query: 296 IRFISNKNVFN 306 ++ + + + Sbjct: 298 LKAAGAQAILD 308 >gi|126740632|ref|ZP_01756319.1| porphobilinogen deaminase [Roseobacter sp. SK209-2-6] gi|126718433|gb|EBA15148.1| porphobilinogen deaminase [Roseobacter sp. SK209-2-6] Length = 319 Score = 260 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 131/307 (42%), Positives = 180/307 (58%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A+ETR+ L +P I+ + T GD ++ L E+GG Sbjct: 11 PLKIGTRGSPLALAQAYETRARLAKAFDLPQEAFEIVVIKTTGDNQALIAADKPLKELGG 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+SG ID AVHS KDMP +GL + YLPRED+RD F+S L+D Sbjct: 71 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVLQPEGLLLDCYLPREDVRDAFVSPKFSRLQD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LA +V+GTSSLRR+A L+ R D+ V++FRG ++TRL KL + A LA AG+ RL Sbjct: 131 LAAGAVVGTSSLRRRAQLMNRRPDLKVVEFRGNVQTRLKKLEDGVAECTFLAMAGLNRLA 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E V + D P+ QGAI IE ++ + +++ I+ + T + ERAFLA L Sbjct: 191 MESVPATAIETTDMLPAVAQGAIGIERRSDDSRVAAMLEAIHDKATGQRLAAERAFLAAL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A G TL G VL DG ++ D +GRD A + + Sbjct: 251 DGSCETPIAGLAELDGGTLRMRGEVLRPDGSEAIAEDQSCAIEDGAALGRDMAAKLLDQA 310 Query: 301 NKNVFNF 307 + F++ Sbjct: 311 GPSFFDW 317 >gi|123968087|ref|YP_001008945.1| porphobilinogen deaminase [Prochlorococcus marinus str. AS9601] gi|158513952|sp|A2BPX7|HEM3_PROMS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123198197|gb|ABM69838.1| Porphobilinogen deaminase [Prochlorococcus marinus str. AS9601] Length = 316 Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 100/308 (32%), Positives = 160/308 (51%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +I +R S LA+ + L IP + I ++T+GD+I + L +IG Sbjct: 1 MTNFKLKIASRRSKLAMVQTLWVKDQLEK--NIPNLEVSIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117 KGLFT+E+E +++ G D AVHS KD+PT L GL++ RED D + + Sbjct: 59 KGLFTKELEAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVNKKNDCYK 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L++L S++GTSSLRR A L + D RG + TR+ KL+ + I+LA AG+K Sbjct: 119 LENLPEGSIVGTSSLRRLAQLRNKYPHLVFKDIRGNVITRIEKLDAGEFDCIILAAAGLK 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL E I +I+ E + GQGA+ IE ++ K E++ ++ + T ERAFL Sbjct: 179 RLGFESRIHQIIPSEVSLHAVGQGALGIECKSDDKKVLEIISILEDKPTCQRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + + L G+V + DG+ + G+ D +G++ A+ ++ Sbjct: 239 RELEGGCQVPIGVNSKIQNEQLCLTGMVASLDGERLIKDQYIGDINDPEEVGKELAKKLK 298 Query: 298 FISNKNVF 305 + + Sbjct: 299 QQGAEEIL 306 >gi|167630035|ref|YP_001680534.1| porphobilinogen deaminase [Heliobacterium modesticaldum Ice1] gi|167592775|gb|ABZ84523.1| porphobilinogen deaminase [Heliobacterium modesticaldum Ice1] Length = 315 Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 106/307 (34%), Positives = 162/307 (52%), Gaps = 4/307 (1%) Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M ++P IGTR S LAL L +++ P + + TKGD+I + L +I Sbjct: 1 MSALQRPVVIGTRDSALALWQTHWVLERLKELY--PEQAFEVKHIKTKGDKILDVALAKI 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G KGLFT+E+E +++GEID AVHS KD+PT L +G I A RED RD+ IS L Sbjct: 59 GDKGLFTKELEVAMLNGEIDMAVHSMKDLPTLLPEGCAIGAICVREDCRDILISRNGGGL 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 ++L + +GT+SLRRKA + + R D+ ++D RG ++TR+ K+ ++LA AG+KR Sbjct: 119 EELPRGAKVGTASLRRKAQIWKVRPDLELVDIRGNLQTRMRKMEEQNLDGLILAAAGVKR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + I E + ++ P+ GQG++ IE + LV +NH ++ V ERA L Sbjct: 179 LGWAEKITEYIPVDMCLPAVGQGSVGIEIREGDEAIGRLVAALNHAESALCVRAERALLR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+G C+ I G L G+V + DG+ G+ D G A+ + Sbjct: 239 TLEGGCQVPIGSLGRLSGGKLIVDGVVASLDGRTICRDRVEGDPADPEEAGVRLAKKLLQ 298 Query: 299 ISNKNVF 305 + + Sbjct: 299 QGAREIL 305 >gi|172039291|ref|YP_001805792.1| porphobilinogen deaminase [Cyanothece sp. ATCC 51142] gi|171700745|gb|ACB53726.1| porphobilinogen deaminase [Cyanothece sp. ATCC 51142] Length = 331 Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 104/307 (33%), Positives = 162/307 (52%), Gaps = 5/307 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RIG+R S LAL + + L + P + +ST+GD+I + L +IG K Sbjct: 18 STRTIRIGSRKSQLALVQTYWIQEELQKHY--PDRQFDVETMSTQGDKILDVALAKIGDK 75 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118 GLFT+E+E ++ ++D AVHS KD+PT L +GL + R + D + +H + L Sbjct: 76 GLFTKELETAMLQNQVDFAVHSLKDLPTNLPEGLMLGCVTERVNPADALVVNETHQDKQL 135 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L SVIGTSSLRR A L ++ D RG + TRL+KL+ + AI+LA AG++R Sbjct: 136 DTLPEGSVIGTSSLRRLAQLRHHYPHLTFKDVRGNVNTRLSKLDAGEYDAIILAVAGLQR 195 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L I +++ + + GQGA+ IE +P+ +L+KV+ H +T D ERAFL Sbjct: 196 LDMSDRIHQVIPDDISLHAVGQGALGIECRSGDPEILDLLKVLEHTETRDRCYAERAFLR 255 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +L+G C+ I + + L G+V + DGK + + G A +G + A +R Sbjct: 256 QLEGGCQVPIGVNTKIENNILTLTGMVASLDGKTLIKDTIQGEAAQAEKLGEELALRLRD 315 Query: 299 ISNKNVF 305 + Sbjct: 316 EGATEIL 322 >gi|320354663|ref|YP_004196002.1| hydroxymethylbilane synthase [Desulfobulbus propionicus DSM 2032] gi|320123165|gb|ADW18711.1| hydroxymethylbilane synthase [Desulfobulbus propionicus DSM 2032] Length = 319 Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 112/301 (37%), Positives = 172/301 (57%), Gaps = 2/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+ + ++ + H P + ++ ++TKGDRI + L ++GGKGLF Sbjct: 5 LRIGTRASLLAVTQSTWVKTQIEQAH--PGTRVELVKITTKGDRILDVPLAKVGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++GE+D AVHS KD+PT+L +GL I RE D F+S T +L DL + Sbjct: 63 KEIEDALLAGEVDLAVHSMKDVPTELPEGLHIGVIPVRETPYDAFLSKTCTTLADLPQGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSSLRRK+ L+ R D+ ++D RG I+TRL KL+ AI+LA AG++RL E I Sbjct: 123 TIGTSSLRRKSQLMALRPDLDIVDLRGNIDTRLRKLDEGVYDAIILAGAGLRRLHLEHRI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +L P+ QGA+ IE ++ + + ++ ++H +T +V ERAFL L+G C+ Sbjct: 183 TALLEPTQMLPAISQGALGIELRQDDTELADGLRFLHHGETAVAVEAERAFLLRLEGGCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IA A ++ G++ + DG+ + + G A +G AQ + K + Sbjct: 243 VPIAAHATLDSGSVTLTGLIASVDGRQILKEATTGPAEQAARLGAQLAQTLLDRGGKAIL 302 Query: 306 N 306 + Sbjct: 303 D 303 >gi|326561756|gb|EGE12091.1| porphobilinogen deaminase [Moraxella catarrhalis 7169] Length = 321 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 110/313 (35%), Positives = 164/313 (52%), Gaps = 10/313 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNHFEHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L Sbjct: 179 LHKRIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292 +G C+ IAGFA + L G V + DGK + + A +G D Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQLGIDV 298 Query: 293 AQYIRFISNKNVF 305 A + ++ Sbjct: 299 AHELLMQGADDIL 311 >gi|326571836|gb|EGE21842.1| porphobilinogen deaminase [Moraxella catarrhalis BC7] Length = 321 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 108/313 (34%), Positives = 164/313 (52%), Gaps = 10/313 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNRFEHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + A++LA +G++RL Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAVILATSGLERLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L Sbjct: 179 LHERIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292 +G C+ IAGFA + L G V + DGK + + A +G D Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQLGIDV 298 Query: 293 AQYIRFISNKNVF 305 A + ++ Sbjct: 299 AHELLMQGADDIL 311 >gi|296112247|ref|YP_003626185.1| porphobilinogen deaminase [Moraxella catarrhalis RH4] gi|295919941|gb|ADG60292.1| porphobilinogen deaminase [Moraxella catarrhalis RH4] Length = 321 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 109/313 (34%), Positives = 164/313 (52%), Gaps = 10/313 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNRFEHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L Sbjct: 179 LHERIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292 +G C+ IAGFA + L G V + DGK + + A +G D Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSRKLMGEIQLDEQAAEQLGIDV 298 Query: 293 AQYIRFISNKNVF 305 A + ++ Sbjct: 299 AHELLMQGADDIL 311 >gi|326569020|gb|EGE19089.1| porphobilinogen deaminase [Moraxella catarrhalis BC1] Length = 321 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 109/313 (34%), Positives = 164/313 (52%), Gaps = 10/313 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNHFEHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL Sbjct: 119 LPTGAILGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L Sbjct: 179 LHKRIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292 +G C+ IAGFA + L G V + DGK + + A +G D Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSRKLMGEIQLDEQAAEQLGIDV 298 Query: 293 AQYIRFISNKNVF 305 A + ++ Sbjct: 299 AHELLMQGADDIL 311 >gi|326560715|gb|EGE11083.1| porphobilinogen deaminase [Moraxella catarrhalis 46P47B1] Length = 321 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 109/313 (34%), Positives = 164/313 (52%), Gaps = 10/313 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNRFEHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L Sbjct: 179 LHERIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292 +G C+ IAGFA + L G V + DGK + + A +G D Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQLGIDV 298 Query: 293 AQYIRFISNKNVF 305 A + ++ Sbjct: 299 AHELLMQGADDIL 311 >gi|303229236|ref|ZP_07316032.1| hydroxymethylbilane synthase [Veillonella atypica ACS-134-V-Col7a] gi|302516091|gb|EFL58037.1| hydroxymethylbilane synthase [Veillonella atypica ACS-134-V-Col7a] Length = 312 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 171/305 (56%), Gaps = 2/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RIGTR S LAL + +S L ++ P + ++ +TKGDRI ++ L E+GGK Sbjct: 1 MRNHIRIGTRKSALALWQSEYVKSELQRLY--PGITVELVHFNTKGDRILDKPLAEVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT E+E + +G+ID AVHS KDMPT+L GL + A RE D +S ++L L Sbjct: 59 GLFTAELEAAMHAGDIDIAVHSLKDMPTELPDGLTLGAISKREVPFDALVSPKYKTLDQL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSSLRR+A LL R D+ + RG ++TRL K+ ++LA AG+KRL Sbjct: 119 PEGARIGTSSLRRQAQLLHRRPDLQIEVIRGNVQTRLGKIETEGLDGVVLAQAGLKRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I ++ ++ P+ GQGA+ IE ++ + E++ I+ E T +V ER+FL +L+ Sbjct: 179 DDRITQVFTADEMIPAVGQGALAIECRSDDTEMLEILSKIDDEPTRLAVEGERSFLNQLN 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ + + + L ++ + DGK +E +G + +G++ A+ + Sbjct: 239 GGCQVPMGVYGTVEKGQLILKALIASLDGKTVYEGELSGPAKKGVMLGKNLAKALYEEGG 298 Query: 302 KNVFN 306 K++ Sbjct: 299 KHIVE 303 >gi|326574375|gb|EGE24318.1| porphobilinogen deaminase [Moraxella catarrhalis CO72] gi|326575506|gb|EGE25431.1| porphobilinogen deaminase [Moraxella catarrhalis 101P30B1] Length = 321 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 110/313 (35%), Positives = 164/313 (52%), Gaps = 10/313 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNRFEHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL Sbjct: 119 LPTGAVLGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L Sbjct: 179 LHKRIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292 +G C+ IAGFA + L G V + DGK + + A +G D Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQLGIDV 298 Query: 293 AQYIRFISNKNVF 305 A + ++ Sbjct: 299 AHELLMQGADDIL 311 >gi|326562302|gb|EGE12628.1| porphobilinogen deaminase [Moraxella catarrhalis 103P14B1] gi|326563079|gb|EGE13352.1| porphobilinogen deaminase [Moraxella catarrhalis 12P80B1] gi|326571711|gb|EGE21724.1| porphobilinogen deaminase [Moraxella catarrhalis BC8] gi|326578075|gb|EGE27935.1| porphobilinogen deaminase [Moraxella catarrhalis O35E] Length = 321 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 109/313 (34%), Positives = 164/313 (52%), Gaps = 10/313 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A ++ L ++ P ++ ++ + TKGD+I + L +IGG Sbjct: 1 MTIRTLTIATRQSPLALWQANFIKAKLEQLY--PSLSVELLEMVTKGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L D AVHS KD+P L +GL + AY R D F+S+ + L D Sbjct: 59 KGLFVKELEQALYDKRADIAVHSLKDVPMVLPEGLMLGAYCERHAPTDAFVSNHFEHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L + R D+ + RG + TRL KL+ + AI+LA +G++RL Sbjct: 119 LPTGAILGTSSLRRECQLRQARPDLDIKSLRGNVGTRLGKLDAGEYDAIILATSGLERLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K I+ L+ E P+ GQGA+ IE ++ + L+ +NH T V ERA L Sbjct: 179 LHKRIRHELDDELSLPAVGQGALAIECRSDDEAIKLLLSPLNHPKTRLCVLAERAMNRAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV--------SRNGNRCDAINIGRDA 292 +G C+ IAGFA + L G V + DGK + + A +G D Sbjct: 239 EGGCQVPIAGFAVIEDGMLTLRGRVGSVDGKTLLKAQQSHKLMGEIQLDEQAAEQLGIDV 298 Query: 293 AQYIRFISNKNVF 305 A + ++ Sbjct: 299 AHELLMQGADDIL 311 >gi|303230554|ref|ZP_07317308.1| hydroxymethylbilane synthase [Veillonella atypica ACS-049-V-Sch6] gi|302514795|gb|EFL56783.1| hydroxymethylbilane synthase [Veillonella atypica ACS-049-V-Sch6] Length = 312 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 171/305 (56%), Gaps = 2/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RIGTR S LAL + +S L ++ P + ++ +TKGDRI N+ L E+GGK Sbjct: 1 MRNHIRIGTRKSALALWQSEYVKSELQRLY--PGVTVELVHFNTKGDRILNKPLAEVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT E+E + +G+ID AVHS KDMPT+L GL + A RE D +S ++L L Sbjct: 59 GLFTAELEAAMHAGDIDIAVHSLKDMPTELPDGLTLGAISKREVPFDALVSPKYKTLDQL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSSLRR+A LL R D+ + RG ++TRL K+ ++LA AG+KRL Sbjct: 119 PEGARIGTSSLRRQAQLLHRRPDLQIEVIRGNVQTRLGKIETEGLDGVVLAQAGLKRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I ++ ++ P+ GQGA+ IE ++ + E++ I+ E T +V ER+FL +L+ Sbjct: 179 DDRITQVFTADEMIPAVGQGALAIECRSDDTEMLEILSKIDDEPTRLAVEGERSFLNQLN 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ + + + L ++ + DGK +E +G + +G++ A+ + Sbjct: 239 GGCQVPMGVYGTVEKGQLNLKALIASLDGKTVYEGELSGPAKKGVMLGKNLAKALYEEGG 298 Query: 302 KNVFN 306 K++ Sbjct: 299 KHIVE 303 >gi|239905446|ref|YP_002952185.1| porphobilinogen deaminase [Desulfovibrio magneticus RS-1] gi|239795310|dbj|BAH74299.1| porphobilinogen deaminase [Desulfovibrio magneticus RS-1] Length = 311 Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 162/305 (53%), Gaps = 2/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++ I TR S LAL A L H P + ++P+ TKGD I + L ++GGK Sbjct: 1 MREKLVIATRGSKLALWQANHVADRLRQTH--PGLAVDLLPIKTKGDIILDVPLAKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +EIE+ L+ G D AVHS KD+P + GL + RED D +S SL L Sbjct: 59 GLFVKEIEEALLDGRADLAVHSMKDVPAEQPAGLVVGIVPEREDPCDRLLSVAYDSLAAL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSSLRRKA LL R D++++D RG ++TR+ KL + + AI++A AG+ RL+ Sbjct: 119 PQGATVGTSSLRRKAQLLALRPDLAIVDLRGNLDTRVKKLLDGQFDAIIVAAAGLNRLEL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 L +F P+ QGA+ IE +++P+ ++ +H ++ D+V ER FL L+ Sbjct: 179 SAPKAVRLGPPEFLPAAAQGALGIEYRLDDPETAAMLAFFDHPESHDAVAAERGFLGHLE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ IA A G ++ G+V + + +G R A +G A+ + Sbjct: 239 GGCQVPIAAHAVIDGDMIHLEGLVADPETGQTFREAASGPRSQATALGVAVAEAVLARGA 298 Query: 302 KNVFN 306 K V + Sbjct: 299 KAVLD 303 >gi|71909286|ref|YP_286873.1| porphobilinogen deaminase [Dechloromonas aromatica RCB] gi|123733070|sp|Q479S8|HEM3_DECAR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|71848907|gb|AAZ48403.1| Porphobilinogen deaminase [Dechloromonas aromatica RCB] Length = 311 Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 109/307 (35%), Positives = 162/307 (52%), Gaps = 3/307 (0%) Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + I +R S LA+ A R L ++ P +VI+ ++TKGD+I +R L EIG Sbjct: 1 MSRPSKIVIASRESRLAMWQAVHVRDRLSSLN--PGAEVVILGMTTKGDQILDRPLAEIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E + G+ AVHS KD+P + +G ++A RE+ RD F+S+ L Sbjct: 59 GKGLFIKELEVAMQEGKAHLAVHSMKDVPMVMPEGFVLAAISARENPRDAFVSNKYNGLD 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL +++GTSSLRR+++L + + RG ++TRL KL+ + AI+LA AG+ RL Sbjct: 119 DLPAGAIVGTSSLRRESILRAKYPQLVIKSLRGNLDTRLKKLDAGEYDAIILAAAGLIRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E IK +L E P+PGQGA+ IE ++V +N +T V ERAF Sbjct: 179 GMENRIKSVLTAEQSLPAPGQGALGIELIDGAADMADVVAPLNDPETAHCVKAERAFSRA 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L GSC+ + G+A L+ G V +DG+ GN D +G A +R Sbjct: 239 LGGSCQVPLGGYAIIDNGQLWLRGFVATADGQEVVSAELRGNPADDEALGLQLAAELRAK 298 Query: 300 SNKNVFN 306 + Sbjct: 299 GADAILE 305 >gi|21328661|gb|AAM48667.1| porphobilinogen deaminase [uncultured marine proteobacterium] Length = 316 Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 134/305 (43%), Positives = 187/305 (61%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K P IGTR SPLALA A+ETR+ L +P I+ + T GDR+T+R L EIGGKG Sbjct: 9 KTPLNIGTRGSPLALAQAYETRARLAKAFDLPFEAFEIVVIMTTGDRVTDRPLKEIGGKG 68 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT EIE+ ++ G ID AVHS KDMP GL + YLPRED+RD FIS + +L DL+ Sbjct: 69 LFTREIEQAMLDGSIDIAVHSMKDMPVLQPDGLVLDTYLPREDVRDAFISLSGGALSDLS 128 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+A L R D+ V++FRG ++TRL KL N A A LA AG+KRL + Sbjct: 129 PGAVVGTSSLRRQAQLKLRRPDLQVVEFRGNLQTRLKKLENQVAEATFLAMAGLKRLNMD 188 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +V ++ + ++D P+ QGAI IE +N+ + +++ I+ +T + ERAFLA LDG Sbjct: 189 EVPRQAIEVDDMLPAVAQGAIGIERRINDGRMADMLAAIHDRETGQRLAAERAFLAALDG 248 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC++ IAG + +GST+ G VL DG D G++ A + + + Sbjct: 249 SCETPIAGLSELQGSTMRLRGEVLRPDGSDAIHDDMVVPIEDGAQAGKEMAAKLLEQAGR 308 Query: 303 NVFNF 307 F++ Sbjct: 309 GFFDW 313 >gi|301062020|ref|ZP_07202731.1| hydroxymethylbilane synthase [delta proteobacterium NaphS2] gi|300443871|gb|EFK07925.1| hydroxymethylbilane synthase [delta proteobacterium NaphS2] Length = 316 Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 115/300 (38%), Positives = 170/300 (56%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL + + L H ++ +I + T GD+I + L++IGGKGLF Sbjct: 3 IRIGTRGSKLALTQSEWIKEQLEIRHS--GIHVDLIKIKTTGDKILDTPLSKIGGKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ ID AVHS KD+P +L + L +S + PRED D I+ + L L + Sbjct: 61 KEIEEALLQNRIDVAVHSMKDVPAELPEALMLSTFPPREDPSDALIAQENRRLDQLPEGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR A LL R D++++ RG ++TRL KL + + A++LA AG+ RL VI Sbjct: 121 RVGTSSLRRGAQLLHLRPDLTLVPLRGNVDTRLGKLKSGEVEAVILATAGLNRLGLSGVI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + P+ GQGA+ +E ++ + + +NH+DT +V ER FL L+G C+ Sbjct: 181 TQRIPFHQLLPAVGQGALGLEVRRDDRETIRRLDFLNHDDTRTAVTAERGFLKTLEGGCQ 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IAGFA G L F G+V DG ++ G+R DA IG +AA+ + +V Sbjct: 241 VPIAGFAQIVGDNLSFEGLVAELDGSRIYKEIATGSRDDAEKIGIEAAKTLLSSGAGDVL 300 >gi|33866317|ref|NP_897876.1| porphobilinogen deaminase [Synechococcus sp. WH 8102] gi|39931373|sp|Q7U5C2|HEM3_SYNPX RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|33639292|emb|CAE08300.1| Porphobilinogen deaminase [Synechococcus sp. WH 8102] Length = 317 Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 102/308 (33%), Positives = 157/308 (50%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLTITVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + + + Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNAKNANHK 118 Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L +V+GTSSLRR A L +S D RG + TRL KL++ ++LA AG++ Sbjct: 119 LDTLPEGAVVGTSSLRRLAQLRHHYPHLSFKDVRGNVITRLEKLDSGDYDCLILAAAGLE 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +I+ + + GQGA+ IE + P+ E++KV+ H T ERAFL Sbjct: 179 RLGFGNRIHQIIPGDISLHAVGQGALGIECVEDKPEVLEIIKVLEHTTTSRRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + L G+V + DGK +G+ D +IG + A ++ Sbjct: 239 RELEGGCQVPIGVNSQINNEELTLTGMVASLDGKRLIRDEASGSAADPESIGIELAGKLK 298 Query: 298 FISNKNVF 305 + Sbjct: 299 HQGAGAIL 306 >gi|114308050|gb|ABI59293.1| hydroxymethylbilane synthase [Nitrosomonas eutropha C91] Length = 334 Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 165/306 (53%), Gaps = 3/306 (0%) Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + I +R S LAL A RS L++++ P +I I+ ++TKGD+I + +L++IG Sbjct: 27 MSSPEKIVIASRESQLALWQANFIRSRLLELY--PQTDITILGMTTKGDQILDVSLSKIG 84 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E L G D AVHS KD+P + G +++A RED RD F+S+ SL+ Sbjct: 85 GKGLFIKELELALEDGRADIAVHSMKDVPMIVPSGFRLAAITEREDPRDAFVSNDFTSLE 144 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L SV+GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL Sbjct: 145 ELPTGSVVGTSSLRRESQLRARFPHLQVRPLRGNVQTRLRKLDEGEYSAIILAAAGLKRL 204 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I ++ E P+ GQGA+ IE N+P E +K ++H T V ERA Sbjct: 205 ELGYRISMLIPPELSLPAVGQGALGIECRDNDPDMVEWMKPLHHATTAYCVEAERAMSRV 264 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L GSC+ + GFA L G V DG G +G AQ ++ Sbjct: 265 LGGSCQVPLGGFAEIFEGVLTLRGFVATPDGSKIIADKLCGKPESGERVGEQLAQNLKTH 324 Query: 300 SNKNVF 305 + + Sbjct: 325 GAEEIL 330 >gi|116075276|ref|ZP_01472536.1| porphobilinogen deaminase [Synechococcus sp. RS9916] gi|116067473|gb|EAU73227.1| porphobilinogen deaminase [Synechococcus sp. RS9916] Length = 316 Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 106/308 (34%), Positives = 156/308 (50%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALEQLRIASRRSQLAMVQTNWVKAELEKAH--PGLAISVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + + Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALAVNAKNAQYK 118 Query: 121 LAL---HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L SV+GTSSLRR A L + D RG + TRL KL++ + ++LA AG+ Sbjct: 119 LDTLPAGSVVGTSSLRRLAQLRHHYPHLEFKDVRGNVITRLEKLDSGEYDCLILAAAGLT 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +I+ E + GQGA+ IE +P+ EL+KV+ H T ER+FL Sbjct: 179 RLGFGDRIHQIIPSEISLHAVGQGALGIECVEGSPEVLELIKVLEHAPTAARCLAERSFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I G TL G+V + DGK +G DA IG+ A ++ Sbjct: 239 RELEGGCQVPIGVNTVIDGDTLTLTGMVASLDGKRLIRDQASGTTADAEAIGKQLADTLK 298 Query: 298 FISNKNVF 305 + Sbjct: 299 GQGAGEIL 306 >gi|124025263|ref|YP_001014379.1| porphobilinogen deaminase [Prochlorococcus marinus str. NATL1A] gi|158512743|sp|A2C0V4|HEM3_PROM1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123960331|gb|ABM75114.1| Porphobilinogen deaminase [Prochlorococcus marinus str. NATL1A] Length = 315 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 102/309 (33%), Positives = 153/309 (49%), Gaps = 5/309 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ R L H P I I ++T+GD+I + L +IG Sbjct: 1 MTLDQLRIASRRSQLAMVQTNWVRDELQRAH--PDLAITIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + + + Sbjct: 59 KGLFTKELEAQMLLGHAEIAVHSLKDLPTNLPEGLILGCITEREDPSDALVVNEKNQIHK 118 Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L SV+GTSSLRR A L + D RG + TRL KL++ + ++LA AG++ Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRYHYPHLVFKDVRGNVITRLEKLDSGEYDCLILAAAGLQ 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +++ + + GQGA+ IE K +++K + HE T ER+FL Sbjct: 179 RLGFANRIHQLIPTDISLHAVGQGALGIECVSGQQKVLDILKTLEHESTSKRCLAERSFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + L G+V + DGK + G+ A IG D A ++ Sbjct: 239 RELEGGCQVPIGVRTEINNNELILEGMVASLDGKRLIRDIKKGSVSSAEEIGIDLANELK 298 Query: 298 FISNKNVFN 306 + Sbjct: 299 GRGAGEILE 307 >gi|225848376|ref|YP_002728539.1| porphobilinogen deaminase [Sulfurihydrogenibium azorense Az-Fu1] gi|225644642|gb|ACN99692.1| porphobilinogen deaminase [Sulfurihydrogenibium azorense Az-Fu1] Length = 308 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 110/304 (36%), Positives = 178/304 (58%), Gaps = 6/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL A + + +H + ++ ++T GD+I + L +IGGKGLF Sbjct: 2 KVRIGTRKSQLALWQANYIANLINQIH---GVEVELVKITTSGDKILDVPLAKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE ++ GEID AVHS KD+PT+L +GL I A RED RD F+S +SLKDL Sbjct: 59 VKEIEDAMLKGEIDIAVHSLKDVPTQLPEGLDIIAITEREDPRDAFLSTKYKSLKDLPAG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRRK+ +++ R D+ + D RG ++TR+ KL + AI+LAYAG+KRL + Sbjct: 119 AVVGTSSLRRKSQIMKMRDDLIINDLRGNVDTRIRKLEEGQYDAIILAYAGLKRLGLDSK 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + ++ P+ QG + IE V++ + +++++ IN+++++ ER+FL L+G C Sbjct: 179 ASYIFSPQEMIPAVCQGFLGIEARVDDERIKKILEPINNQESFIRATAERSFLKTLEGGC 238 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + + + K ++ G + +GK F + S + N A +G+ A + Sbjct: 239 QVPLGAYCEIKDDFIHITGFIADLEGKTFIKESLSEKLTNINQAKELGQRLANILLKRGG 298 Query: 302 KNVF 305 K++ Sbjct: 299 KDIL 302 >gi|161594062|ref|NP_899724.2| porphobilinogen deaminase [Chromobacterium violaceum ATCC 12472] gi|55976482|sp|Q7P207|HEM3_CHRVO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 309 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 111/301 (36%), Positives = 166/301 (55%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A ++ L ++ P + I+ ++T+GD+I ++TL++IGGKGLF Sbjct: 3 KIVIASRESRLAMWQAEHIQARLQALY--PHLTVEILGMTTQGDQILDKTLSKIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E+ L+ G D AVHS KD+P L G ++A RED RD F+S+ Q L +L Sbjct: 61 VKELEQALMDGRADLAVHSLKDVPMTLPDGFALAAVCEREDPRDAFVSNRYQHLSELPAG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SV+GTSSLRR+A L ++V RG ++TRL KL++ + AI+LA AG+KRL + Sbjct: 121 SVVGTSSLRREAQLRARFPQLAVKPLRGNVQTRLKKLDDGEFDAIILAAAGLKRLGLAER 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ L + P+ GQGA+ IE + L+ +NH DT ERA EL GSC Sbjct: 181 IQGELAPSESLPAAGQGALGIEIRADRADLSALLAPLNHPDTRACTAAERALAKELGGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + + FA TL G+V DG + S +G A +GR A+ + + + Sbjct: 241 QVPLGAFATLADGTLTLGGLVAHPDGSVVLTASASGPADYADALGRAVAKKLIDAGARPL 300 Query: 305 F 305 Sbjct: 301 I 301 >gi|323451650|gb|EGB07526.1| hypothetical protein AURANDRAFT_27306 [Aureococcus anophagefferens] Length = 333 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 131/306 (42%), Positives = 187/306 (61%), Gaps = 3/306 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIP---PHNIVIIPLSTKGDRITNRTLTEIGGK 61 P RIGTR SPLALA A+ TR LM I + + T+GD I ++ L+EIGGK Sbjct: 19 PLRIGTRGSPLALAQAYMTRELLMKNFPEELGGEGAIQLCIMKTQGDMILDKALSEIGGK 78 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT+E++ L+ E+D VHS KD+PT L + L RED RDVFIS TA+SLKDL Sbjct: 79 GLFTKELDVALLGDEVDICVHSMKDVPTWLPAKTVLPCMLEREDTRDVFISPTAKSLKDL 138 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SVIG++SLRR++ +L + ++FRG ++TRL KL+ A LLAYAG+KR+ Sbjct: 139 KDGSVIGSASLRRQSQILAINPTLKCVNFRGNVQTRLRKLDEGVVDATLLAYAGLKRMDM 198 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + +L ++ P+ QGAI I+ ++ +A + + +NHE+T+ V+CERAFLA LD Sbjct: 199 ADEVTAVLEWDEMLPAVAQGAIGIQCRDDDARALKYIAALNHEETFTCVSCERAFLAALD 258 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G+CK+ IAG A L F G+V + DG+ + ++ G DA IGR+A + I+ + Sbjct: 259 GNCKTPIAGQARIVDGELLFDGLVSSLDGQQMYRATKTGAPADAEKIGREAGEGIKAEAG 318 Query: 302 KNVFNF 307 F + Sbjct: 319 IEFFEW 324 >gi|258514534|ref|YP_003190756.1| porphobilinogen deaminase [Desulfotomaculum acetoxidans DSM 771] gi|257778239|gb|ACV62133.1| porphobilinogen deaminase [Desulfotomaculum acetoxidans DSM 771] Length = 309 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 111/303 (36%), Positives = 164/303 (54%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +GTR S LAL A L + + P ++ I + T GD I + L +IG KG Sbjct: 1 MREIVVGTRDSQLALWQANWVVDRLRERN--PGYSFRIQGIKTHGDNILDVALAKIGDKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E L+S EID AVHS KD+PT L GL + A RE DV +S L L Sbjct: 59 LFTKELEVALLSDEIDLAVHSMKDLPTDLPGGLAVGAVCEREYPGDVLVSSQGYVLDKLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR A LL +R D+ +++ RG + TRL K++ K ++LAYAGI+RL + Sbjct: 119 EGAVIGTSSLRRTAQLLHYRQDLRIVNIRGNLNTRLRKMDEEKLDGVVLAYAGIQRLGLK 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E + +E P+ GQG+I IE + + ++V+ I H + +V+ ER FL L+G Sbjct: 179 DRITERIPMEICLPAVGQGSIGIEIRHLDEEIMDIVETIEHRPSRIAVSAERNFLKRLEG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I + G+ + F G++ + DGK G +A IG A+ + + Sbjct: 239 GCQVPIGAYGLVIGNEIKFEGLIASLDGKHLVRDVIAGPVNEAAKIGVKLAESLLKKGGR 298 Query: 303 NVF 305 + Sbjct: 299 EIL 301 >gi|323701815|ref|ZP_08113485.1| porphobilinogen deaminase [Desulfotomaculum nigrificans DSM 574] gi|323533119|gb|EGB22988.1| porphobilinogen deaminase [Desulfotomaculum nigrificans DSM 574] Length = 309 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 103/304 (33%), Positives = 159/304 (52%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ ++G+R S LAL + L + P + I+ + TKGD++ + L +IG K Sbjct: 1 MKRKIKVGSRDSALALWQTRWVVAQLEQQN--PHLSFEIVTMKTKGDKMLDVALAKIGDK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT+E+E +++ EID AVHS KDMPT L GL I A R++ D IS + L +L Sbjct: 59 GLFTKELELAMLNKEIDFAVHSLKDMPTALPAGLTIGAVCKRDNPGDALISKDGRKLAEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSSLRR A LL +R D + RG + TR+ K+ + + AI+LA AGI R+ Sbjct: 119 PQGARIGTSSLRRCAQLLNYRPDFRLEALRGNLNTRMKKMASQQLDAIILAAAGIYRMGW 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +I EI+ P+ GQGAI +E ++ + +L++ + H+ T + + ER+ L L+ Sbjct: 179 SDMIAEIIPFNVCLPAVGQGAIAVECREDDIEINQLLQGVEHQPTRVATDAERSLLRRLE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I + L IV DG+ G A +G + A + + Sbjct: 239 GGCQVPIGAYGEVIEDRLSLQAIVATLDGQRLIRAQGEGALNQAEELGIEVADKLLSMGG 298 Query: 302 KNVF 305 K + Sbjct: 299 KEIL 302 >gi|242278118|ref|YP_002990247.1| porphobilinogen deaminase [Desulfovibrio salexigens DSM 2638] gi|259647794|sp|C6BYB7|HEM3_DESAD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|242121012|gb|ACS78708.1| porphobilinogen deaminase [Desulfovibrio salexigens DSM 2638] Length = 308 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 110/304 (36%), Positives = 166/304 (54%), Gaps = 2/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + I TR S LAL A L + + P + ++ + TKGD+I + L ++GGKG Sbjct: 1 MRKITIATRGSKLALWQANHISDLLREEY--PGIEVQLLKIKTKGDKILDVPLAKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L+ G D AVHS KD+PT+L +GL++ PRE D +S SLKDL Sbjct: 59 LFVKEIEEALLDGRADLAVHSMKDVPTELPEGLEVGIIPPREAETDTLLSVKYDSLKDLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR++ +L R D+ + RG ++TR+ KL N + AI++A AG+ RLK Sbjct: 119 AGAVVGTSSLRRQSQVLALRDDLKIESLRGNLDTRVGKLLNGEFDAIVVATAGLNRLKLS 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 EIL F P+ QGA+ IE + + + Q+++ ++ E T V ER FL LDG Sbjct: 179 APKSEILGPPTFLPAVAQGALGIEYRIEDTEIQDILAFLHDEMTARQVKAERGFLTGLDG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IA ++ + + G V DG + + G DA +IG A+ + K Sbjct: 239 GCQVPIAAWSQLESDQVKLTGFVADIDGSSPIRMEKTGPAEDAWDIGLALAEEVLAAGAK 298 Query: 303 NVFN 306 + + Sbjct: 299 EILD 302 >gi|88705502|ref|ZP_01103212.1| Porphobilinogen deaminase [Congregibacter litoralis KT71] gi|88700015|gb|EAQ97124.1| Porphobilinogen deaminase [Congregibacter litoralis KT71] Length = 308 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 100/300 (33%), Positives = 166/300 (55%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR SPLAL A+ R +L++ H P + ++ ++++GD+I + L ++GGKGLF Sbjct: 5 VVIATRESPLALWQAYFVRDTLLETH--PGITVELLGMTSRGDQILDVPLAKVGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G AVHS KD+P + +GL+++ RE+ D F+S+ ++L L + Sbjct: 63 KELETALLDGRAHIAVHSMKDVPMEFPEGLELAVICEREEPADAFVSNRYENLDALPAGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ L R D+ V RG + TRL KL+ + A++LA AG+ RL+ + I Sbjct: 123 IVGTSSLRRECQLRANRPDLEVRFLRGNVNTRLRKLDEGEYDAVILACAGLIRLEMGERI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + + D P+ GQGA+ IE ++ ++L++ ++H T + V ERA L G C+ Sbjct: 183 RARIPVTDSLPAGGQGAVGIEIRSDDSATRKLLEPLHHGPTAERVLAERALNRRLQGGCE 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IA +A +G L+ G+V DG G+R + +G A + + Sbjct: 243 VPIASYAVHEGDELWLRGLVGRPDGSHTLRADARGSREEPEALGIAVADSLLEAGAAEIL 302 >gi|148241995|ref|YP_001227152.1| porphobilinogen deaminase [Synechococcus sp. RCC307] gi|158513324|sp|A5GSE0|HEM3_SYNR3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|147850305|emb|CAK27799.1| Porphobilinogen deaminase [Synechococcus sp. RCC307] Length = 317 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 102/308 (33%), Positives = 150/308 (48%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ R L + H P I I ++T+GD+I + L +IG Sbjct: 1 MTASSLRIASRRSQLAMVQTEWVRDELANAH--PGLEISIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL-- 118 KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + H Sbjct: 59 KGLFTKELEAQMLVNRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVMHAKNKDLT 118 Query: 119 -KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L +V+GTSSLRR A L ++ D RG + TRL KL++ + ++LA AG+ Sbjct: 119 LATLPEGAVVGTSSLRRLAQLRYHYPHLTFKDVRGNVITRLEKLDSGQFDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I E+++ + GQGA+ IE + E +KV+ H T ERAFL Sbjct: 179 RLGLGDRIHELIDPSISLHAVGQGALGIECRDGDAAVLEQIKVLEHRPTSLRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L+G C+ I +G L G+V + DGK + A ++G A+ +R Sbjct: 239 RTLEGGCQVPIGVNTRFEGDELVLTGMVASLDGKQLIRDELRAPQDQAEDLGNRLAELLR 298 Query: 298 FISNKNVF 305 + Sbjct: 299 SQGAGEIL 306 >gi|117924047|ref|YP_864664.1| hydroxymethylbilane synthase [Magnetococcus sp. MC-1] gi|117607803|gb|ABK43258.1| hydroxymethylbilane synthase [Magnetococcus sp. MC-1] Length = 314 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 169/306 (55%), Gaps = 3/306 (0%) Query: 1 MEKKPF-RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M RIGTR S LA+ A +S L H P + + + TKGD+I + L ++G Sbjct: 1 MSDPQLVRIGTRGSALAVWQAEWVKSQLQAHH--PGIIVELELIKTKGDKILDVPLAKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E+ ++ G +D AVHS KD+P + GL + L RED RD +S QSL Sbjct: 59 GKGLFVKELEEAMLDGRVDLAVHSMKDVPAEFPDGLMLGPILKREDPRDALLSIHYQSLA 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L ++IG+SSLRR++ + R D+ + RG + TR+ KL + AI+LA AG+KRL Sbjct: 119 ELPQGALIGSSSLRRQSQIKAKRPDLRLDWLRGNVGTRIQKLVEGQFDAIILAAAGVKRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + + L E+ P+ GQGA+ IE V++ + L+ + H++T V ERAFLA+ Sbjct: 179 GLTEHVVQYLEPEEMLPAVGQGAVGIEHRVDDARIATLLAPLYHKETHSCVTAERAFLAK 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ IAG+A TL G+V +G + G R DA +G+ A + Sbjct: 239 LEGGCQVPIAGYATLHEDTLTLRGLVAEVEGGRVVQAQCQGPRADAYRMGQQLATQLLEA 298 Query: 300 SNKNVF 305 + Sbjct: 299 GGGAIL 304 >gi|308273123|emb|CBX29726.1| Porphobilinogen deaminase [uncultured Desulfobacterium sp.] Length = 323 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 119/304 (39%), Positives = 167/304 (54%), Gaps = 2/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ IGTR S LAL A +S L+ K ++ + + TKGDRI + L ++GGKG Sbjct: 17 KRKIIIGTRGSKLALWQAEWVKSYLVQ--KFTDLSVELKIIKTKGDRILDVALAKVGGKG 74 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L ID AVHS KDMP L GL I A RE+ RDV IS L L Sbjct: 75 LFVKEIEQSLADSSIDIAVHSMKDMPADLHDGLCIGAIPERENPRDVLISGKGLLLSQLP 134 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A + R R D+ + RG ++TR+NKL + AI+LA AG+KRL E Sbjct: 135 EGALVGTSSLRRIAQIKRIRPDLVIAPLRGNLDTRINKLEMGEIDAIILAAAGVKRLGLE 194 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 K+I E LN + P+ GQGA+CIE ++ + +NH T V ERAFL ++G Sbjct: 195 KIITEYLNEDTMLPAVGQGALCIEIRKDDHDISGFINEMNHFVTRAVVLGERAFLKRIEG 254 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+ + G+V DGK ++ G+ + +IG A + + K Sbjct: 255 GCQVPIAGYGKVENDIFIIRGLVADPDGKTIITDTQRGSLESSESIGAALADRLISMGAK 314 Query: 303 NVFN 306 + + Sbjct: 315 RLLD 318 >gi|255262067|ref|ZP_05341409.1| porphobilinogen deaminase [Thalassiobium sp. R2A62] gi|255104402|gb|EET47076.1| porphobilinogen deaminase [Thalassiobium sp. R2A62] Length = 326 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 134/303 (44%), Positives = 179/303 (59%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P IGTR SPLALA A+ETR+ L +P I+ + T GDRI +R L EIGGKGLF Sbjct: 23 PLNIGTRGSPLALAQAYETRARLSAAFDLPSEAFTIVVIKTTGDRIIDRPLKEIGGKGLF 82 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE ++ G+ID AVHS KDMP GL I YLPRED RD FI+ LKDLA Sbjct: 83 TREIEDAMLQGDIDIAVHSMKDMPVLQPDGLLIDTYLPREDNRDAFIALDGSGLKDLAEG 142 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR A L+ R D+++++FRG ++TRL KL + A A LA AG+ RLK + V Sbjct: 143 ATVGTSSLRRHAQLMNRRPDLNIVEFRGNLQTRLKKLGDGVAEATFLAMAGLNRLKMDDV 202 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + +D P+ QGAI IE ++ + E+++ I+ T + ERAFL LDGSC Sbjct: 203 PRTAIETDDMLPAVAQGAIGIERRADDSRMAEMLEAIHDGPTGQRLAAERAFLKALDGSC 262 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ IAG A G LY G VL DG + +G D +GR A + + + Sbjct: 263 ETPIAGLAELNGGILYLRGEVLRVDGSDTVYDAASGPIEDGAEMGRVMAAKLLAEAGEGF 322 Query: 305 FNF 307 F++ Sbjct: 323 FDW 325 >gi|288818572|ref|YP_003432920.1| porphobilinogen deaminase [Hydrogenobacter thermophilus TK-6] gi|288787972|dbj|BAI69719.1| porphobilinogen deaminase [Hydrogenobacter thermophilus TK-6] gi|308752163|gb|ADO45646.1| porphobilinogen deaminase [Hydrogenobacter thermophilus TK-6] Length = 304 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 115/300 (38%), Positives = 174/300 (58%), Gaps = 6/300 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + L + H + ++ ++T GD+I + L +IGGKGLF Sbjct: 3 LRIGTRKSKLALWQANFVKEKLEKM----GHQVDLVHITTSGDKILDVPLAKIGGKGLFV 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ EID AVHS KD+P L +GL+I A RE+ DV IS L++L ++ Sbjct: 59 KEIEEALMKKEIDLAVHSLKDVPMNLPEGLKIGAVTERENPFDVLISKDHLPLEELPSNA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+ + R R D+ V RG ++TR+ KL+ HA++LAYAG+KR+ E I Sbjct: 119 KVGTSSLRRQVQIKRRRGDLRVEMLRGNVDTRIRKLDEGLYHAVILAYAGVKRMGLEDRI 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ +EDF P+ GQG++ IE ++ +E+V +H ++ CERAFL EL G C+ Sbjct: 179 TQV--LEDFIPAVGQGSLAIEIRQDDSAVEEIVSCFDHYESRLRAECERAFLRELQGGCQ 236 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 I +++ +G T++ G V +G F E R+G +A IG+ A + + Sbjct: 237 VPIGAYSWIEGDTIFIKGFVSDLEGIKFIEGMRSGEAKEAQQIGKSLAHDLLREGADQIL 296 >gi|254525987|ref|ZP_05138039.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9202] gi|221537411|gb|EEE39864.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9202] Length = 318 Score = 258 bits (658), Expect = 8e-67, Method: Composition-based stats. Identities = 104/308 (33%), Positives = 159/308 (51%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +I +R S LA+ + L IP ++ I ++T+GD+I + L +IG Sbjct: 1 MTNFKLKIASRRSKLAMVQTLWVKDQLER--NIPNLDVSIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117 KGLFT+E+E +++ G D AVHS KD+PT L GL++ RED D + + Sbjct: 59 KGLFTKELEAQMLVGHADIAVHSLKDLPTNLPTGLKLGCITKREDPADALVVSKKNDCYK 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L S++GTSSLRR A L + D RG + TR+ KL+ + I+LA AG+K Sbjct: 119 LETLPEGSIVGTSSLRRLAQLRNKYPHLVFKDIRGNVITRIEKLDAGEFDCIILAAAGLK 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL E I +I+ E + GQGA+ IE ++ K E++ V+ + T ERAFL Sbjct: 179 RLGFESRIHQIIPSEISLHAVGQGALGIECKSDDKKVLEIINVLEDKPTSQRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + LY G+V + DGK + GN + +G + A+ ++ Sbjct: 239 RELEGGCQVPIGVNSNIDNGQLYLTGMVASLDGKKLIKDQVIGNINNPELVGIELAKRLK 298 Query: 298 FISNKNVF 305 F + Sbjct: 299 FQGADKIL 306 >gi|94969590|ref|YP_591638.1| porphobilinogen deaminase [Candidatus Koribacter versatilis Ellin345] gi|123256362|sp|Q1INI6|HEM3_ACIBL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|94551640|gb|ABF41564.1| hydroxymethylbilane synthase [Candidatus Koribacter versatilis Ellin345] Length = 311 Score = 258 bits (658), Expect = 9e-67, Method: Composition-based stats. Identities = 103/302 (34%), Positives = 169/302 (55%), Gaps = 6/302 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIG+R S LAL A + L + H + + + T GD+I + L ++G KG+F Sbjct: 3 TLRIGSRGSQLALWQANHISALLRER----GHEVELEIIKTTGDKILDVALAKVGTKGMF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+EIE+ L +G++D AVHS KD+PT+L +G +++A RE+ RDVF+S S+ L Sbjct: 59 TKEIEEALAAGKVDVAVHSLKDLPTELPQGFELAAVTKRENPRDVFLSVKYDSISGLPQG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A + R D+ + RG ++TR+ KL + AI+LA+AG+ RL K ++ Sbjct: 119 AKVGTSSLRRQAQIKAIRPDLEIFPLRGNVDTRVRKLEQGEYDAIILAFAGLNRLGKTQL 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 +KEI++ + P+ GQGA+ IE + + + +E++ +N D + ERA L +L G C Sbjct: 179 VKEIISEDVMCPAAGQGALGIEIRLGDTRMREILSFLNDYDARATTTAERALLNQLGGGC 238 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I FA K ++ I DG S++G D ++G + + + + Sbjct: 239 QVPIGAFAEVKDGQVHLTAICARPDGSEILRESKSG--ADPAHLGEEVGKTLLARGATKI 296 Query: 305 FN 306 Sbjct: 297 LE 298 >gi|86139102|ref|ZP_01057673.1| porphobilinogen deaminase [Roseobacter sp. MED193] gi|85824333|gb|EAQ44537.1| porphobilinogen deaminase [Roseobacter sp. MED193] Length = 319 Score = 258 bits (658), Expect = 9e-67, Method: Composition-based stats. Identities = 129/307 (42%), Positives = 176/307 (57%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A+ETR L + +P I+ + T GD ++ L E+GG Sbjct: 11 PLKIGTRGSPLALAQAYETRRRLAEAFDLPHEAFEIVVIKTSGDNQALIAADKPLKELGG 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+SG ID AVHS KDMP +GL + YLPRED+RD F+S L+D Sbjct: 71 KGLFTKEIEEDLLSGAIDIAVHSMKDMPVAQPEGLLLDCYLPREDVRDAFVSPKFSRLQD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A L+ R D+ V++FRG ++TRL KLN A LA AG+ RL Sbjct: 131 LEPGAVVGTSSLRRRAQLMNRRPDLKVVEFRGNVQTRLKKLNEGVAECTFLAMAGLNRLA 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V + D P+ QGAI IE ++ + +++ I+ T + ERAFLA L Sbjct: 191 MADVPATAIETNDMLPAVAQGAIGIERRGDDSRTAAMLEAIHDVTTGKRLAAERAFLAAL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A G TL G VL DG ++ D +GR+ A + + Sbjct: 251 DGSCETPIAGLAELDGGTLRLRGEVLRPDGSEALAEDQSCAIEDGGELGREMAAKLLATA 310 Query: 301 NKNVFNF 307 F++ Sbjct: 311 GPGFFDW 317 >gi|304388235|ref|ZP_07370355.1| hydroxymethylbilane synthase [Neisseria meningitidis ATCC 13091] gi|304337762|gb|EFM03911.1| hydroxymethylbilane synthase [Neisseria meningitidis ATCC 13091] Length = 311 Score = 258 bits (658), Expect = 9e-67, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDRTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYTRLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARELI 303 >gi|261393090|emb|CAX50687.1| porphobilinogen deaminase (PBG; hydroxymethylbilane synthase; HMBS; pre-uroporphyrinogen synthase) [Neisseria meningitidis 8013] Length = 311 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 103/305 (33%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARELI 303 >gi|325141763|gb|EGC64215.1| porphobilinogen deaminase [Neisseria meningitidis 961-5945] gi|325197751|gb|ADY93207.1| porphobilinogen deaminase [Neisseria meningitidis G2136] Length = 311 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARELI 303 >gi|325133945|gb|EGC56601.1| porphobilinogen deaminase [Neisseria meningitidis M13399] gi|325143900|gb|EGC66212.1| porphobilinogen deaminase [Neisseria meningitidis M01-240013] gi|325206609|gb|ADZ02062.1| porphobilinogen deaminase [Neisseria meningitidis M04-240196] Length = 311 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 102/305 (33%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYTRLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ + P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 179 LDGRIRMILSESESLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARELI 303 >gi|291288798|ref|YP_003505614.1| porphobilinogen deaminase [Denitrovibrio acetiphilus DSM 12809] gi|290885958|gb|ADD69658.1| porphobilinogen deaminase [Denitrovibrio acetiphilus DSM 12809] Length = 308 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 117/306 (38%), Positives = 170/306 (55%), Gaps = 5/306 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK I TR S LAL A+ TR L H + + + TKGD+I + L +IGG Sbjct: 1 MEK--VVIATRGSNLALWQAYYTRDRLQKEH---GVEVELNIIKTKGDKILDVPLAKIGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ LI G+ D AVHS KD+P ++ +GL++ A D F+S + + Sbjct: 56 KGLFVKEIEQALIDGKADIAVHSMKDVPMEMPEGLELYASPEGASPYDCFVSVKYNEVVE 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRRK LL+ R D+ + D RG + TRL KL + I+LA AG+ RL+ Sbjct: 116 LPQGAVVGTSSLRRKLQLLKMRPDLVIKDLRGNVNTRLAKLEAGEFDGIVLAKAGLVRLE 175 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 VIKE + P+ QGA+ + N+ + +EL++ + T V+ ERAFL L Sbjct: 176 LGHVIKETFTADQMLPACCQGALGFQIRANDTRMKELLRFMKDPATETKVSMERAFLRRL 235 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C++ IAG + GS + GIV A DG+ F E G+ DA +G + A+ + Sbjct: 236 EGGCQAPIAGHSVLTGSKICMKGIVAALDGRTFIEQFIEGHAEDAEKLGLELAERVLNAG 295 Query: 301 NKNVFN 306 K++ Sbjct: 296 AKDILE 301 >gi|313496556|gb|ADR57922.1| HemC [Pseudomonas putida BIRD-1] Length = 313 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H + ++P+ ++GD++ + L +IGG Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAHT--GLQVTLVPMVSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHVDTADRVMAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V G R A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRAAAEALGVQVAEDLLGQG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AEAIL 303 >gi|56698469|ref|YP_168844.1| porphobilinogen deaminase [Ruegeria pomeroyi DSS-3] gi|56680206|gb|AAV96872.1| porphobilinogen deaminase [Ruegeria pomeroyi DSS-3] Length = 319 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 134/307 (43%), Positives = 188/307 (61%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A+ETR L +P I+ +ST GD +R L EIG Sbjct: 11 PLKIGTRGSPLALAQAYETRHRLGAAFDLPEDAFEIVVISTTGDNRAMIEADRPLKEIGN 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ ++ G+ID AVHS KDMP + GL + +LPRED+RD FIS +++D Sbjct: 71 KGLFTKEIEEAMLRGDIDIAVHSTKDMPVEQPAGLVLDTFLPREDVRDAFISPGHSAIRD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L +V+GTSSLRRKA LL R D+ V++FRG ++TRL KL+ A LA AGI+RL Sbjct: 131 LPLGAVVGTSSLRRKAQLLNRRPDLKVVEFRGNVQTRLRKLSEGVAECTFLAMAGIRRLN 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +V ++ +D P+ QGAI IE +++ +A E++ I+H +T + ERA LA L Sbjct: 191 MAEVPATAISPDDMLPAIAQGAIGIERRMDDTRAAEMLTAIHHGETGQRLAAERALLAAL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A G+TL G VL DG + R+G+ D +G + A+ + + Sbjct: 251 DGSCETPIAGLAELDGTTLRLRGEVLRPDGSEAITLDRSGDVADGPALGTEMARELLAQA 310 Query: 301 NKNVFNF 307 F++ Sbjct: 311 GPGFFDW 317 >gi|157412912|ref|YP_001483778.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9215] gi|167008816|sp|A8G3L1|HEM3_PROM2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157387487|gb|ABV50192.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9215] Length = 318 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 103/308 (33%), Positives = 158/308 (51%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +I +R S LA+ + L IP ++ I ++T+GD+I + L +IG Sbjct: 1 MTNFKLKIASRRSKLAMVQTLWVKDQLER--NIPNLDVSIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117 KGLFT+E+E +++ G D AVHS KD+PT L GL++ RED D + + Sbjct: 59 KGLFTKELEAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVSKKNDYYK 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L S++GTSSLRR A L + D RG + TR+ KL+ + I+LA AG+K Sbjct: 119 LETLPEGSIVGTSSLRRLAQLRNKYPHLVFKDIRGNVITRIEKLDAGEFDCIILAAAGLK 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL E I +I+ E + GQGA+ IE ++ K E++ V+ + T ERAFL Sbjct: 179 RLGFESRIHQIIPSEISLHAVGQGALGIECKSDDKKVLEIINVLEDKPTSQRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + LY G+V + DGK + GN + +G + A+ ++ Sbjct: 239 RELEGGCQVPIGVNSNIDNGQLYLTGMVASLDGKKLIKDQVIGNINNPELVGIELAKRLK 298 Query: 298 FISNKNVF 305 + Sbjct: 299 LQGADKIL 306 >gi|148545465|ref|YP_001265567.1| porphobilinogen deaminase [Pseudomonas putida F1] gi|167008818|sp|A5VWX3|HEM3_PSEP1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|148509523|gb|ABQ76383.1| hydroxymethylbilane synthase [Pseudomonas putida F1] Length = 313 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H + ++P+ ++GD++ + L +IGG Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAHT--GLQVTLVPMVSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLET 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHVDTADRVIAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V G R A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRAAAEALGVQVAEDLLGQG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AEAIL 303 >gi|15676445|ref|NP_273584.1| porphobilinogen deaminase [Neisseria meningitidis MC58] gi|11386833|sp|Q9K0P6|HEM3_NEIMB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|7225764|gb|AAF40968.1| porphobilinogen deaminase [Neisseria meningitidis MC58] gi|254671891|emb|CBA04160.1| Porphobilinogen deaminase [Neisseria meningitidis alpha275] gi|308388723|gb|ADO31043.1| putative porphobilinogen deaminase [Neisseria meningitidis alpha710] gi|316985397|gb|EFV64345.1| porphobilinogen deaminase [Neisseria meningitidis H44/76] gi|319409917|emb|CBY90242.1| porphobilinogen deaminase (PBG; hydroxymethylbilane synthase; HMBS; pre-uroporphyrinogen synthase) [Neisseria meningitidis WUE 2594] gi|325127627|gb|EGC50543.1| porphobilinogen deaminase [Neisseria meningitidis N1568] gi|325139808|gb|EGC62341.1| porphobilinogen deaminase [Neisseria meningitidis CU385] gi|325200773|gb|ADY96228.1| porphobilinogen deaminase [Neisseria meningitidis H44/76] Length = 311 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYTRLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARELI 303 >gi|78778881|ref|YP_396993.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9312] gi|123741491|sp|Q31C38|HEM3_PROM9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78712380|gb|ABB49557.1| hydroxymethylbilane synthase [Prochlorococcus marinus str. MIT 9312] Length = 316 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 103/308 (33%), Positives = 161/308 (52%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +I +R S LA+ + L IP + I ++T+GD+I + L +IG Sbjct: 1 MTNFKLKIASRRSKLAMVQTLWVKDQLEK--NIPNLEVSIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117 KGLFT+E+E +++ G+ D AVHS KD+PT L GL++ RED D + + Sbjct: 59 KGLFTKELEAQMLVGQADIAVHSLKDLPTNLPSGLKLGCITKREDPADALVVSKKNDCYK 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L S++GTSSLRR A L ++ D RG + TR+ KL+ + I+LA AG+K Sbjct: 119 LETLPAGSIVGTSSLRRLAQLRNKYPHLNFKDIRGNVITRIEKLDAGEFDCIILAAAGLK 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL E I +I+ E + GQGA+ IE ++ K E++ V+ + T ERAFL Sbjct: 179 RLGFESRIHQIIPNEISLHAVGQGALGIECKSDDKKVLEIISVLEDKPTSQRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + + LY G+V + DG+ + GN D +G++ A+ ++ Sbjct: 239 RELEGGCQVPIGVNSSIQNEQLYLTGMVASLDGERLIKDQYIGNIDDPEQVGKELAKKLK 298 Query: 298 FISNKNVF 305 + Sbjct: 299 LQGADKIL 306 >gi|87302648|ref|ZP_01085465.1| porphobilinogen deaminase [Synechococcus sp. WH 5701] gi|87282992|gb|EAQ74949.1| porphobilinogen deaminase [Synechococcus sp. WH 5701] Length = 317 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 103/309 (33%), Positives = 145/309 (46%), Gaps = 5/309 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ R L H P I I ++T+GD+I + L +IG Sbjct: 1 MAGTTLRIASRRSQLAMVQTHWVRDELTRAH--PDLEISIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E +++ D AVHS KD+PT L GL + RED D + H Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPDGLMLGCITEREDPADALVLHERHRGCS 118 Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L SV+GTSSLRR A L D RG + TRL KL++ ++LA AG+ Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRHHFPHFQFKDVRGNVITRLEKLDSGDYDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +++ + GQGA+ IE + E +KV+ H T ERAFL Sbjct: 179 RLGLGHRIDALIDPSISLHAVGQGALGIECRHGDSAVLEQIKVLEHLPTARRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +L+G C+ I + +G L G+V + DG G + D +G AQ +R Sbjct: 239 RQLEGGCQVPIGVNSRFEGEELVLTGMVASLDGLRLIRDEARGPQQDPEAVGTSLAQLLR 298 Query: 298 FISNKNVFN 306 + Sbjct: 299 SQGAGEILE 307 >gi|148238945|ref|YP_001224332.1| porphobilinogen deaminase [Synechococcus sp. WH 7803] gi|147847484|emb|CAK23035.1| Porphobilinogen deaminase [Synechococcus sp. WH 7803] Length = 319 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 102/308 (33%), Positives = 157/308 (50%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 3 MALEHLRIASRRSQLAMVQTNWVKAELEKAH--PGLAISVEAMATQGDKILDVALAKIGD 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + ++ + Sbjct: 61 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNSKNAEHT 120 Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L SV+GTSSLRR A L + D RG + TRL KL+ + ++LA AG+ Sbjct: 121 LETLPEGSVVGTSSLRRLAQLRHHFPHLQFKDVRGNVITRLEKLDAGQYDCLILAAAGLS 180 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +I+ + GQGA+ IE + P+ ++++V+ H T ERAFL Sbjct: 181 RLGFGDRIHQIIPGHISLHAVGQGALGIECVCDRPEVLKIIQVLEHAPTAGRCLAERAFL 240 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + G+ L G+V + DG+ R G+ D IGR A ++ Sbjct: 241 RELEGGCQVPIGVNSRIDGTELILTGMVASLDGQRLIRDERRGSLTDPEAIGRALAADLK 300 Query: 298 FISNKNVF 305 + Sbjct: 301 SRGAGEIL 308 >gi|218767661|ref|YP_002342173.1| porphobilinogen deaminase [Neisseria meningitidis Z2491] gi|11386831|sp|Q9JVS4|HEM3_NEIMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|121051669|emb|CAM07972.1| putative porphobilinogen deaminase [Neisseria meningitidis Z2491] Length = 311 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARELI 303 >gi|317154529|ref|YP_004122577.1| porphobilinogen deaminase [Desulfovibrio aespoeensis Aspo-2] gi|316944780|gb|ADU63831.1| porphobilinogen deaminase [Desulfovibrio aespoeensis Aspo-2] Length = 310 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 109/304 (35%), Positives = 161/304 (52%), Gaps = 2/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR S LAL A + L H P + ++ + TKGD+I + L ++GGKG Sbjct: 1 MKQLTIATRGSALALWQANHIKDRLEAEH--PGLTVHLLKIKTKGDKILDVPLAKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L+ G AVHS KD+PT+L +GL++ RE D +S + L L Sbjct: 59 LFVKEIEEALLDGRAQLAVHSMKDVPTELPEGLEVGVIPEREASTDSLLSVKYEGLAGLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR++ L R D+ + RG ++TR+ KL + AI++A AG+ RL+ Sbjct: 119 RGAVVGTSSLRRQSQLATLRPDLKIESLRGNLDTRVRKLLAGEFDAIVVATAGLNRLELT 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 EIL DF P+ QGA+ IE H N + +++ +NHE + V ER FL LDG Sbjct: 179 APKHEILGPPDFLPAVAQGALGIEYHSANAEVAAMLQFLNHEPSKRQVLAERGFLTGLDG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IA ++ G L G V DG ++ G +A +IG A+ + K Sbjct: 239 GCQVPIAAWSVIDGERLRLTGFVADVDGSRPIRMTAEGPVDNAWDIGAALAEKVLAAGGK 298 Query: 303 NVFN 306 + + Sbjct: 299 AILD 302 >gi|26986930|ref|NP_742355.1| porphobilinogen deaminase [Pseudomonas putida KT2440] gi|38258017|sp|Q88RE5|HEM3_PSEPK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|24981540|gb|AAN65819.1|AE016210_7 porphobilinogen deaminase [Pseudomonas putida KT2440] Length = 313 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 164/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H + ++P+ ++GD++ + L +IGG Sbjct: 1 MSTREIRIATRKSALALWQAEYVKARLEQAHT--GLQVTLVPMVSRGDKLLDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL+ Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++D P+ GQGA+ IE + + L+ ++H DT D V ERA L Sbjct: 179 FEDRITSTISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHVDTADRVIAERALNKRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ IA +A +G L+ G+V G R A +G A+ + Sbjct: 239 NGGCQVPIACYAVLEGDQLWLRGLVGQPSGGTLLVADARAPRAAAEALGVQVAEDLLGQG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AEAIL 303 >gi|320529107|ref|ZP_08030199.1| porphobilinogen deaminase [Selenomonas artemidis F0399] gi|320138737|gb|EFW30627.1| porphobilinogen deaminase [Selenomonas artemidis F0399] Length = 311 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 107/306 (34%), Positives = 166/306 (54%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M IGTR S LAL A L H P +V+ ++TKGD+I + L +IGG Sbjct: 1 MNSGTITIGTRASKLALWQAKFVAGELQKRH--PSVTVVLKEMTTKGDKILDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ +++G+ID AVHS KDMPT++ GL I A R D D F+S+ ++++ Sbjct: 59 KGLFTKELEQAMLAGDIDIAVHSLKDMPTEIPAGLIIGAITARLDPGDAFVSNQYAAIEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+A LL R D+ ++D RG + TRL KL+ + A++LA AG++RL Sbjct: 119 LPAGARVGTSSLRRRAQLLAVRPDLVLLDLRGNVNTRLEKLDAGEFDAVVLAAAGLRRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ +L P+ GQGA+ IE ++ + + + D + ERAFL + Sbjct: 179 LGDRIRSVLPRAMMLPAVGQGALAIECRADDAEICAAIGFMCDADMTAAAAAERAFLGRV 238 Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ + +A G LY ++ + DG +G A IG A+ + + Sbjct: 239 EGGCQIPVGVYAEIGDGDMLYVDAMIASVDGMRVCRSRASGRPAQAAQIGVALAEELLDM 298 Query: 300 SNKNVF 305 + + Sbjct: 299 GGREIL 304 >gi|298493147|ref|YP_003723324.1| porphobilinogen deaminase ['Nostoc azollae' 0708] gi|298235065|gb|ADI66201.1| porphobilinogen deaminase ['Nostoc azollae' 0708] Length = 322 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 105/306 (34%), Positives = 158/306 (51%), Gaps = 5/306 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P RIG+R S LAL + + L P + +ST+GD+I + L +IG KGL Sbjct: 9 RPIRIGSRKSQLALVQTYWVQEQLQK--SFPNITFEVHTMSTQGDKILDVALAKIGDKGL 66 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E ++I+ EID AVHS KD+PT L +GL ++A RE+ D + H + + Sbjct: 67 FTKELELRMINKEIDFAVHSLKDLPTNLPEGLTLAAITERENPADAVVLHKKHKDQQIET 126 Query: 124 ---HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 +VIGTSSLRR A L + D RG + TR+ KL+ + A++LA AG++RL Sbjct: 127 LPAGAVIGTSSLRRLAQLRYKFPHFTFKDVRGNLITRIGKLDAGEYDALILAVAGLERLD 186 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +IL + + GQGA+ IE ++ + L+K I H T D ER+FL L Sbjct: 187 MSHRIDQILPPDISLHAVGQGALGIECRSDDTEVISLLKAIEHSQTRDRCLAERSFLRVL 246 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I L G+V + DG+ + + G DA +G A+ +R Sbjct: 247 EGGCQVPIGVDTQINSKELTLKGLVASVDGQKLVKDTVTGTAADAEKLGAQLARILRQKG 306 Query: 301 NKNVFN 306 + Sbjct: 307 ATEILE 312 >gi|289548019|ref|YP_003473007.1| porphobilinogen deaminase [Thermocrinis albus DSM 14484] gi|289181636|gb|ADC88880.1| porphobilinogen deaminase [Thermocrinis albus DSM 14484] Length = 300 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 121/301 (40%), Positives = 183/301 (60%), Gaps = 6/301 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + L D+ H + ++P++T GD+IT+ L +IGGKGLF Sbjct: 3 IRIGTRRSQLALWQANYVKRKLEDM----GHTVELVPITTTGDKITDAPLAKIGGKGLFV 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G+ID AVHS KD+PTKL GL + A RE DV IS Q L++L + Sbjct: 59 KEIEEALLRGDIDVAVHSLKDVPTKLPDGLTLGAITERELPYDVLISRDGQRLENLPTGA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRRK + R R D+ + D RG ++TR+ KL+ + AI+LAYAGI+R+ E I Sbjct: 119 VVGTSSLRRKVQIKRMRRDLVIKDLRGNVDTRIRKLDEGQYDAIVLAYAGIRRMGWENRI 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +I +EDF P+ GQG++ +E ++ K +E++ +++H ++ V ERAFL ++G C+ Sbjct: 179 VQI--LEDFIPAVGQGSMAVEIREDDEKIREVISLLDHRESRIRVEAERAFLEVMEGGCQ 236 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + A+ GS L+ G + +G+ F E GN A +GR+ A+ I +++ Sbjct: 237 VPMGAIAWLDGSRLFMKGFLSDLEGENFVEAYVEGNVEKAQLLGRELAEKILSQGGRSIL 296 Query: 306 N 306 Sbjct: 297 E 297 >gi|260435886|ref|ZP_05789856.1| porphobilinogen deaminase [Synechococcus sp. WH 8109] gi|260413760|gb|EEX07056.1| porphobilinogen deaminase [Synechococcus sp. WH 8109] Length = 317 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 105/308 (34%), Positives = 151/308 (49%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLKITVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + +T Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNTKNHAYK 118 Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L SV+GTSSLRR A L + D RG + TRL KL+N ++LA AG+ Sbjct: 119 LDTLPEGSVVGTSSLRRLAQLRHHYPHLIFKDVRGNVITRLEKLDNGDYDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +++ + + GQGA+ IE P+ E +KV+ H T ERAFL Sbjct: 179 RLGFGDRIHQLIPGDISLHAVGQGALGIECVEGKPEVLEAIKVLEHTPTSQRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I +G L G+V + DGK +G DA IG A ++ Sbjct: 239 RELEGGCQVPIGVNTRFEGDQLILTGMVASLDGKRLIRDQASGAASDAEAIGIALANTLK 298 Query: 298 FISNKNVF 305 + Sbjct: 299 GQGAGEIL 306 >gi|126695860|ref|YP_001090746.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9301] gi|158513419|sp|A3PBM0|HEM3_PROM0 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|126542903|gb|ABO17145.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9301] Length = 316 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 102/308 (33%), Positives = 159/308 (51%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +I +R S LA+ + L IP + I ++T+GD+I + L +IG Sbjct: 1 MTNFKLKIASRRSKLAMVQTLWVKDQLER--NIPNLEVSIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117 KGLFT+E+E +++ G D AVHS KD+PT L GL++ RED D + + Sbjct: 59 KGLFTKELEAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVNKKNDCYK 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L S++GTSSLRR A L + D RG + TR+ KL+ + I+LA AG+K Sbjct: 119 LETLPEGSIVGTSSLRRLAQLRNKYPHLIFKDIRGNVITRIEKLDAGEFDCIILAAAGLK 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL E I +I+ E + GQGA+ IE ++ K E++ ++ + T ERAFL Sbjct: 179 RLGFESRIHQIIPSEISLHAVGQGALGIECKSDDKKVLEIINILEDKPTSQRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + + L G+V + DG+ + GN D IG++ A+ ++ Sbjct: 239 RELEGGCQVPIGVNSNIQNEKLCLTGMVASLDGERLIKDQHIGNINDPEEIGKELAKKLK 298 Query: 298 FISNKNVF 305 + + Sbjct: 299 QQGAEEIL 306 >gi|317969656|ref|ZP_07971046.1| porphobilinogen deaminase [Synechococcus sp. CB0205] Length = 317 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 104/309 (33%), Positives = 154/309 (49%), Gaps = 5/309 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ R L H I I ++T+GD+I + L +IG Sbjct: 1 MAGSQLRIASRRSQLAMVQTHWVRDELAKAHA--GLEITIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117 KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + H ++ Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVHEKHKDKT 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L +V+GTSSLRR A L ++ D RG + TRL KL++ + ++LA AG+ Sbjct: 119 LATLPEGAVVGTSSLRRLAQLRHHYPHLTFKDVRGNVITRLEKLDSGEFDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I E+++ + GQGA+ IE + K E +KV+ H T ERAFL Sbjct: 179 RLGLSDRIHELIDPSISLHAVGQGALGIECRDGDAKVLEQIKVLEHVPTARRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I +G L G+V + DGK G++ + +G D A ++ Sbjct: 239 RELEGGCQVPIGVNTRFEGDELVLTGMVASLDGKRLIRDQVQGDQTNPEALGIDLAHKLK 298 Query: 298 FISNKNVFN 306 + Sbjct: 299 AQGAGEILE 307 >gi|158337071|ref|YP_001518246.1| porphobilinogen deaminase [Acaryochloris marina MBIC11017] gi|158307312|gb|ABW28929.1| porphobilinogen deaminase [Acaryochloris marina MBIC11017] Length = 314 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 103/304 (33%), Positives = 149/304 (49%), Gaps = 5/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LAL + L P + + +ST+GD I + L +IG KGLFT Sbjct: 2 IRIGSRKSQLALVQTHWVQGELQK--HFPEYEFEVCTMSTQGDNILDVALAKIGDKGLFT 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLA 122 +E+E ++ E D AVHS KD+PT L +GL + R D D + H L L Sbjct: 60 KELEVSMLRKETDLAVHSLKDLPTNLPEGLCLGVVTERVDPADALVVHENFKAYQLDTLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR A L + D RG + TRL KL+ + I+LA AG++RL Sbjct: 120 EGAVIGTSSLRRLAQLRYNYPHLEFKDIRGNLNTRLQKLDEGEYDGIILAVAGLQRLGFG 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I +++ + GQGA+ IE + + +K + HE + ER+FL EL+G Sbjct: 180 DRIHQVIPANISLHAVGQGALGIECREGDEEIMAFIKALEHEPSAHRCTAERSFLHELEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I K L G+V + DGK + + +G A +G D AQ +R + Sbjct: 240 GCQVPIGVNTSLKEGQLTLVGMVASLDGKRLIKDTVSGPIASATQLGIDLAQKVREQGAQ 299 Query: 303 NVFN 306 + Sbjct: 300 EILE 303 >gi|126658960|ref|ZP_01730102.1| porphobilinogen deaminase [Cyanothece sp. CCY0110] gi|126619758|gb|EAZ90485.1| porphobilinogen deaminase [Cyanothece sp. CCY0110] Length = 317 Score = 257 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 104/307 (33%), Positives = 161/307 (52%), Gaps = 5/307 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RIG+R S LAL + + L + P + +ST+GD+I + L +IG K Sbjct: 4 SSRAIRIGSRKSQLALVQTYWIQEQLQKHY--PDRQFDVETMSTQGDKILDVALAKIGDK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118 GLFT+E+E ++ ++D AVHS KD+PT L GL + R + D + H + L Sbjct: 62 GLFTKELETAMLQNQVDFAVHSLKDLPTNLPDGLMLGCVTERVNPADALVVNEKHKDKQL 121 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L SVIGTSSLRR A L ++ D RG + TRL+KL+ + AI+LA AG++R Sbjct: 122 DTLPEGSVIGTSSLRRLAQLRHHYPHLTFKDVRGNVNTRLSKLDAGEYDAIILAVAGLQR 181 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L I +++ + + GQGA+ IE +P+ +L+K + H +T D ERAFL Sbjct: 182 LDMSDRIHQVIPDDISLHAVGQGALGIECRTGDPEILDLLKALEHPETRDRCYAERAFLR 241 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 EL+G C+ I + + L G+V + DGK + + G + A +G++ A +R Sbjct: 242 ELEGGCQVPIGVNTKIENNFLTLTGMVASLDGKTLIKDTIEGEQDQAEKLGQELAMRLRD 301 Query: 299 ISNKNVF 305 + Sbjct: 302 AGATEIL 308 >gi|212703312|ref|ZP_03311440.1| hypothetical protein DESPIG_01355 [Desulfovibrio piger ATCC 29098] gi|212673272|gb|EEB33755.1| hypothetical protein DESPIG_01355 [Desulfovibrio piger ATCC 29098] Length = 311 Score = 257 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 109/306 (35%), Positives = 158/306 (51%), Gaps = 3/306 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K I TR S LAL A ++ L + P NI + + T+GD I + L+++GGK Sbjct: 1 MRKNLVIATRGSQLALWQAEHVKACLESLE--PGLNISLRVIKTRGDIILDVPLSKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +EIE+ L+ G D AVHS KD+P L +GL + RE D +S+ SL +L Sbjct: 59 GLFVKEIEEALLDGSADLAVHSIKDVPMVLPEGLVLGCVPQREICVDCLLSNRYGSLDEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSSLRR+A LL R D+ ++ RG ++TRL K+ + AI+LA AG+KRL Sbjct: 119 PPGARVGTSSLRRQAQLLNLRPDLEILSLRGNVDTRLRKMKEGEYDAIVLASAGLKRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 F P+ GQGA+ IE ++ + EL+ + H T V ER FLA LD Sbjct: 179 SADRMHHFEAASFVPAVGQGALGIECRGDDGEVLELLSRMEHRPTRICVEAERGFLAGLD 238 Query: 242 GSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG A G+V DG + + G A G A+++ Sbjct: 239 GGCQVPIAGHAEMLDDDRFILDGLVAEVDGSVILREQQEGTAATARETGFALARHLLDKG 298 Query: 301 NKNVFN 306 K++ + Sbjct: 299 GKDILD 304 >gi|150387913|ref|YP_001317962.1| porphobilinogen deaminase [Alkaliphilus metalliredigens QYMF] gi|229836103|sp|A6TJD5|HEM3_ALKMQ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|149947775|gb|ABR46303.1| porphobilinogen deaminase [Alkaliphilus metalliredigens QYMF] Length = 316 Score = 257 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 116/304 (38%), Positives = 172/304 (56%), Gaps = 2/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +IG+R S LAL A + L + K P + II ++T GDRI ++TL +IGGKG Sbjct: 1 MRTIKIGSRASQLALVQAEIIINMLKE--KFPQYTYEIIKITTLGDRILDKTLDKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+K L +ID A+HS KDMP + + L + A RED RDV I+ +SL++L Sbjct: 59 LFVKEIQKALAEEKIDLAIHSMKDMPGETPEELVLGAITKREDPRDVLITRENKSLEELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIG+SSLRR+A ++ R DI V+ RG + TRL K+ ++LA AG+ RL + Sbjct: 119 KGAVIGSSSLRRQAQVMALRGDIKVVPIRGNVGTRLGKIETESLDGVILAAAGLNRLGLK 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I L IEDF P+ GQGA+ E + + E++ INHE+T+ V ERAFL L+G Sbjct: 179 EKISSYLEIEDFTPAVGQGALGCEARRKDIEMLEMLLAINHEETYRCVMAERAFLKLLEG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C I + +G L+ G+V +SDG+ + G+ D +G + + K Sbjct: 239 GCHVPIGAYGQQQGQELHMTGMVASSDGRRVIKEQVMGDIADFQALGIQLGETLIEKGAK 298 Query: 303 NVFN 306 + Sbjct: 299 EILE 302 >gi|72383664|ref|YP_293019.1| porphobilinogen deaminase [Prochlorococcus marinus str. NATL2A] gi|123773715|sp|Q46GS7|HEM3_PROMT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|72003514|gb|AAZ59316.1| hydroxymethylbilane synthase [Prochlorococcus marinus str. NATL2A] Length = 315 Score = 257 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 102/309 (33%), Positives = 152/309 (49%), Gaps = 5/309 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ R L H P I I ++T+GD+I + L +IG Sbjct: 1 MTLDQLRIASRRSQLAMVQTNWVRDELQREH--PDLVITIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E +++ G + AVHS KD+PT L GL + RED D + + + Sbjct: 59 KGLFTKELEAQMLLGHAEIAVHSLKDLPTNLPDGLILGCITKREDPSDALVVNEKNQIHK 118 Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L SV+GTSSLRR A L + D RG + TRL KL++ + ++LA AG++ Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRYHYPHLVFKDVRGNVITRLEKLDSGEYDCLILAAAGLQ 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +++ + + GQGA+ IE K +++K + HE T ER+FL Sbjct: 179 RLGFANRIHQLIPTDISLHAVGQGALGIECVSGQQKVLDILKTLEHESTSKRCLAERSFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + L G+V + DGK + G+ A IG D A ++ Sbjct: 239 RELEGGCQVPIGVRTEINNNELILEGMVASLDGKRLIRDIKKGSVSSAEEIGIDLANELK 298 Query: 298 FISNKNVFN 306 + Sbjct: 299 GRGAGEILE 307 >gi|254671436|emb|CBA08950.1| Porphobilinogen deaminase [Neisseria meningitidis alpha153] Length = 311 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 102/305 (33%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPKGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 179 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARELI 303 >gi|269213761|ref|ZP_05982800.2| hydroxymethylbilane synthase [Neisseria cinerea ATCC 14685] gi|269145303|gb|EEZ71721.1| hydroxymethylbilane synthase [Neisseria cinerea ATCC 14685] Length = 325 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 104/306 (33%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCKVEILGMTTRGDQILDRTLSKVGG 72 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 132 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 133 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 312 Query: 301 NKNVFN 306 + + Sbjct: 313 ARELIE 318 >gi|161869466|ref|YP_001598634.1| porphobilinogen deaminase [Neisseria meningitidis 053442] gi|161595019|gb|ABX72679.1| porphobilinogen deaminase [Neisseria meningitidis 053442] Length = 316 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 103/305 (33%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 6 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++ R + D F+S+ L++ Sbjct: 64 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALATIGERANPFDAFVSNQYTRLEE 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK Sbjct: 124 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 184 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 244 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDG 303 Query: 301 NKNVF 305 + + Sbjct: 304 AQELI 308 >gi|166367009|ref|YP_001659282.1| porphobilinogen deaminase [Microcystis aeruginosa NIES-843] gi|166089382|dbj|BAG04090.1| porphobilinogen deaminase [Microcystis aeruginosa NIES-843] Length = 319 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 159/305 (52%), Gaps = 5/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + ++ L H P + +ST+GD+I + L +IG KGL Sbjct: 8 RSLRIGSRKSQLALVQTYWVQAELSKHH--PHRQFEVETMSTQGDKILDVALAKIGDKGL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-- 121 FT+E+E ++ ID AVHS KD+PT L +GL + R + D + ++ L Sbjct: 66 FTKELEVGMLDRSIDLAVHSLKDLPTNLPEGLILGCVTERVNPADALVVNSQNQDYQLDT 125 Query: 122 -ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 +V+GTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG++RL Sbjct: 126 LPEGAVVGTSSLRRLAQLRYHYPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLERLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + +++ E + GQGA+ IE +P+ E++KV+ H + D ERAFL EL Sbjct: 186 LGDRVHQVIPAEISLHAVGQGALGIECRDADPEVLEVLKVLEHAPSRDRCYAERAFLREL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I + L G+V + DGK + S +G+ +GRD A +R Sbjct: 246 EGGCQVPIGVNTAIEDGILTLTGMVASLDGKRLIKDSVSGDPSHGEVLGRDLAHKVREAG 305 Query: 301 NKNVF 305 + Sbjct: 306 AGEIL 310 >gi|121634334|ref|YP_974579.1| porphobilinogen deaminase [Neisseria meningitidis FAM18] gi|120866040|emb|CAM09778.1| putative porphobilinogen deaminase [Neisseria meningitidis FAM18] gi|325131787|gb|EGC54488.1| porphobilinogen deaminase [Neisseria meningitidis M6190] gi|325137677|gb|EGC60254.1| porphobilinogen deaminase [Neisseria meningitidis ES14902] Length = 311 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 168/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLQADAQAPAEYADALGRAVAKKLADDG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARELI 303 >gi|325202672|gb|ADY98126.1| porphobilinogen deaminase [Neisseria meningitidis M01-240149] Length = 311 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 103/305 (33%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPKGVVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARELI 303 >gi|260425851|ref|ZP_05779830.1| porphobilinogen deaminase [Citreicella sp. SE45] gi|260420343|gb|EEX13594.1| porphobilinogen deaminase [Citreicella sp. SE45] Length = 319 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 136/309 (44%), Positives = 184/309 (59%), Gaps = 4/309 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEI 58 +P RIGTR SPLALA A ETR L D + P I+ + T GD +R L EI Sbjct: 9 DQPLRIGTRGSPLALAQAHETRDRLCDTFALSPEAFEIVVIRTTGDDRSMIAADRPLKEI 68 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G KGLFT+EIE++L++G ID AVHS KDMPT +GL + YLPRED+RD FIS L Sbjct: 69 GNKGLFTKEIEEQLMTGGIDIAVHSMKDMPTLQPEGLMLDCYLPREDVRDAFISPGHGGL 128 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 DL +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A A LA AG+ R Sbjct: 129 GDLPAGTVVGTSSLRRRAQLLNRRPDLRVVEFRGNLQTRLKKLEDGVAAATFLAMAGLNR 188 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + ++ ++ ++ P+ QGAI IE ++ +A E++ I+ DT + ERAFLA Sbjct: 189 MGMTQLPMTAMSPDEMLPAVAQGAIGIERRSDDSRAAEMLAAIHDRDTALRLGAERAFLA 248 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 ELDGSC++ IAG A G+ L G +LA DG H G + +GR AQ + Sbjct: 249 ELDGSCETPIAGLAELDGTALRLRGELLAPDGSASHAGEIAGPADNGPELGRLLAQQLLA 308 Query: 299 ISNKNVFNF 307 + + F + Sbjct: 309 RAGADFFAW 317 >gi|317129820|ref|YP_004096102.1| porphobilinogen deaminase [Bacillus cellulosilyticus DSM 2522] gi|315474768|gb|ADU31371.1| porphobilinogen deaminase [Bacillus cellulosilyticus DSM 2522] Length = 310 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 168/306 (54%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LA+ L + + I + TKGD+I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSNLAMTQTKWVIEQLKSLGL--NYEFEIKEIVTKGDKILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIEK + GEID AVHS KD+P ++ G+ + A R D RD FIS++ + L DL Sbjct: 59 LFVKEIEKAMYDGEIDIAVHSMKDLPAEIADGMAVGAIPKRVDPRDAFISNSGKGLMDLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S++GTSSLRR A +L R D+ + RG I+TRL K AI+LA AGI+R+ Sbjct: 119 AGSIVGTSSLRRSAQVLAKRPDLEIQWIRGNIDTRLRKCREENFDAIILAAAGIERVGWT 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 ++ E L E P+ GQGA+ IE ++ + L+ IN DT +V ERAFL ++ Sbjct: 179 SDIVTEFLEPEVCLPAVGQGALGIECRADDKEVLALLAKINDSDTEKTVTAERAFLHTVE 238 Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ +AG+A + + + +V + DG+ S G D + IG++ AQ + Sbjct: 239 GGCQVPVAGYATLQDNGEIALTALVGSPDGQQIFRESIAGT--DPVAIGKEVAQRMLKAG 296 Query: 301 NKNVFN 306 K V + Sbjct: 297 AKKVLD 302 >gi|194477303|ref|YP_002049482.1| porphobilinogen deaminase [Paulinella chromatophora] gi|171192310|gb|ACB43272.1| porphobilinogen deaminase [Paulinella chromatophora] Length = 313 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 103/308 (33%), Positives = 153/308 (49%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ R L H P I I ++T+GD+I + L +IG Sbjct: 1 MVSSFLRIASRRSQLAMVQTHWVRDQLAQAH--PSLEITIETMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK- 119 KGLFT+E+E +++ D AVHS KD+PT L GL + RED D + + + Sbjct: 59 KGLFTKELEAQMLVNRADIAVHSLKDLPTNLPDGLVLGCVTEREDPADALVINKKYQDRL 118 Query: 120 --DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L S++GTSSLRR A L + D RG + TRL KL++ + ++LA AG++ Sbjct: 119 LDTLPNGSIVGTSSLRRLAQLRHHFPHLVFKDIRGNVITRLEKLDSGEFDCLILAAAGLQ 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I EI++ + GQGA+ IE + + +KV+ H T ERAFL Sbjct: 179 RLGLGSRIHEIIDSSISLHAVGQGALGIECRDGDLDILKQIKVLEHAPTNYRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I KG+ L G+V + DGK G+ + +IG A ++ Sbjct: 239 RELEGGCQVPIGVNTRIKGNQLILTGMVASLDGKRLIRDEVYGDLINPEDIGIKLANILK 298 Query: 298 FISNKNVF 305 +++ Sbjct: 299 EQGAEDIL 306 >gi|148244854|ref|YP_001219548.1| porphobilinogen deaminase [Candidatus Vesicomyosocius okutanii HA] gi|226740640|sp|A5CW34|HEM3_VESOH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|146326681|dbj|BAF61824.1| porphobilinogen deaminase [Candidatus Vesicomyosocius okutanii HA] Length = 304 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 104/304 (34%), Positives = 168/304 (55%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K +I TR SPLAL A +S L ++ P ++++ ++TKGD+I N +L++IGGK Sbjct: 1 MNKTLKIATRQSPLALWQAQHVKSRLEKIY--PNLTVILVKITTKGDQILNSSLSKIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P ++ + ++ A L E+ D F+S+ S+ DL Sbjct: 59 GLFIKELEISIMKGMSDIAVHSMKDVPYEIPQEFELGAILKCENPFDAFVSNHFSSIDDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++ +GT S+RR L R D+ +ID RG + TRL KL++ + AI+LA AG+ RL Sbjct: 119 PKNAKVGTCSMRRILQLKVIRPDLQIIDLRGNVNTRLKKLDDGEFDAIILACAGLIRLGF 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 IK+ + P+ GQGAI IE N+ + +L+K + +T + ERA +L+ Sbjct: 179 GNRIKQQIPENQNLPAVGQGAIGIEIRENDKEILDLIKPLIDIETSYRIIAERAMNTQLE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C +AGFA + G+V D + + G+ A +G + A + + Sbjct: 239 GGCSVPVAGFATINNKQITLTGLVGNIDTGVILKEKIFGHVSQAEILGIELANKLILLGA 298 Query: 302 KNVF 305 K++ Sbjct: 299 KDIL 302 >gi|325129681|gb|EGC52495.1| porphobilinogen deaminase [Neisseria meningitidis OX99.30304] gi|325203630|gb|ADY99083.1| porphobilinogen deaminase [Neisseria meningitidis M01-240355] Length = 311 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 103/305 (33%), Positives = 168/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARELI 303 >gi|33863541|ref|NP_895101.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9313] gi|39931399|sp|Q7V697|HEM3_PROMM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|33640990|emb|CAE21448.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9313] Length = 317 Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 98/308 (31%), Positives = 154/308 (50%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ ++ L H P +I + ++T+GD+I + L +IG Sbjct: 1 MVLTQLRIASRRSQLAMVQTNWVQAELEQAH--PGLSISVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + + + Sbjct: 59 KGLFTKELEAQMLVGRADIAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVNQKNAEHQ 118 Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L +++GTSSLRR A L + D RG + TRL KL+ ++LA AG+ Sbjct: 119 LDTLPEGAIVGTSSLRRLAQLRHHYPHLVFKDVRGNVITRLEKLDAGNYDCLILAAAGLT 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +++ E + GQGA+ IE +P+ E +K + H+ T ERA L Sbjct: 179 RLGFGDRIHQLIPSEISLHAVGQGALGIECVEGHPEVLEAIKALEHKPTAQRCLAERALL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + + + L G+V + DGK + G IG++ A+ ++ Sbjct: 239 RELEGGCQVPIGVNSRIEANELLLTGMVASLDGKRLIRDQQRGPIDRCEAIGKELAETLK 298 Query: 298 FISNKNVF 305 + Sbjct: 299 SQGAGEIL 306 >gi|124022436|ref|YP_001016743.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9303] gi|158512753|sp|A2C7L8|HEM3_PROM3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123962722|gb|ABM77478.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9303] Length = 317 Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 98/308 (31%), Positives = 155/308 (50%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ ++ L H P +I + ++T+GD+I + L +IG Sbjct: 1 MVLTQLRIASRRSQLAMVQTNWVQAELEQAH--PGLSISVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + + + Sbjct: 59 KGLFTKELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVNQKNAEHQ 118 Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L +++GTSSLRR A L + D RG + TRL KL+ ++LA AG+ Sbjct: 119 LDTLPEGAIVGTSSLRRLAQLRHHYPHLVFKDVRGNVITRLEKLDAGNYDCLILAAAGLT 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +++ E + GQGA+ IE +P+ E++K + H+ T ERA L Sbjct: 179 RLGFGDRIHQLIPSEISLHAVGQGALGIECVEGHPEVLEVIKALEHKPTAQRCLAERALL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + + + L G+V + DGK + G IG++ A+ ++ Sbjct: 239 RELEGGCQVPIGVNSRIEANELLLTGMVASLDGKRLIRDQQRGPIDRCEAIGKELAETLK 298 Query: 298 FISNKNVF 305 + Sbjct: 299 SQGAGEIL 306 >gi|86158914|ref|YP_465699.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-C] gi|85775425|gb|ABC82262.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-C] Length = 314 Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 99/300 (33%), Positives = 151/300 (50%), Gaps = 3/300 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLA A L D + P + + L T+GD+I L ++GGKGLF Sbjct: 2 IRIATRRSPLAKWQANHVSQLLRD--REPGLEVRLHELVTRGDKILEVPLADVGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ + + AVHS KD+P L GL +++ RED RD S ++L L + Sbjct: 60 KEIEDALLNRDAEVAVHSMKDLPAVLAPGLVLASVPQREDPRDALCSPRWKTLAALPKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR A L R D+ + RG +ETRL K + A++LAYAG++RL + Sbjct: 120 RVGTSSLRRSAQLKALRPDLQMEVVRGNVETRLRKASEGL-DAVVLAYAGLRRLGLAEHA 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + E+ P+ QGA+ +E ++ + + + +T + ER FLA ++G C+ Sbjct: 179 TYVFPPEEMLPAVAQGALALEARADDAPTLKRLAALEDPETRVRIEAERGFLARIEGGCQ 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IAG A G + +V + DG R G +A +G A+ + + Sbjct: 239 VPIAGHATLAGGKITIRALVASLDGTRVIRGERTGAYAEARALGESLAEELLSRGADQIL 298 >gi|307154737|ref|YP_003890121.1| porphobilinogen deaminase [Cyanothece sp. PCC 7822] gi|306984965|gb|ADN16846.1| porphobilinogen deaminase [Cyanothece sp. PCC 7822] Length = 320 Score = 256 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 162/306 (52%), Gaps = 5/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIG+R S LAL + + L + P + +ST+GD+I + L +IG KG Sbjct: 7 TRTVRIGSRKSQLALVQTYWVQGELQKHY--PDRQFDVETMSTQGDKILDVALAKIGDKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119 LFT+E+E +I +ID AVHS KD+PT L GL + R D D + H + L Sbjct: 65 LFTKELEVGMIDHQIDLAVHSLKDLPTNLPSGLILGCVTERVDPADGLVVNEKHKDKQLD 124 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +VIGTSSLRR A L ++ D RG + TRL+KL+ + AI+LA AG+ RL Sbjct: 125 TLPEGAVIGTSSLRRLAQLRHHFPHLTFKDVRGNVNTRLSKLDAGEYDAIILAVAGLTRL 184 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I +I+ E + GQGA+ IE ++ + +L+KV+ H+ T D ERAFL E Sbjct: 185 GMSDRIHQIIPSEISLHAVGQGALGIECRADDVEVLDLLKVLEHQATRDRCYAERAFLRE 244 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I +G TL G+V + DG+ + S G DA +G++ A +R Sbjct: 245 LEGGCQVPIGVNTSVEGDTLTLTGMVASLDGQKLIKDSITGKASDADQLGQELAIRMRNA 304 Query: 300 SNKNVF 305 + Sbjct: 305 GAGEIL 310 >gi|325135871|gb|EGC58483.1| porphobilinogen deaminase [Neisseria meningitidis M0579] gi|325207582|gb|ADZ03034.1| porphobilinogen deaminase [Neisseria meningitidis NZ-05/33] Length = 311 Score = 256 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 103/305 (33%), Positives = 168/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARELI 303 >gi|88807654|ref|ZP_01123166.1| porphobilinogen deaminase [Synechococcus sp. WH 7805] gi|88788868|gb|EAR20023.1| porphobilinogen deaminase [Synechococcus sp. WH 7805] Length = 317 Score = 256 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 102/308 (33%), Positives = 155/308 (50%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALEHLRIASRRSQLAMVQTNWVKAELESAH--PGMAISVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + ++ + Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNSKNADHT 118 Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L SV+GTSSLRR A L + D RG + TRL KL+ + ++LA AG+ Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRHHFPHLQFKDVRGNVITRLEKLDAGQYDCLILAAAGLS 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +I+ + GQGA+ IE + P+ ++++V+ H T ERAFL Sbjct: 179 RLGFGDRIHQIIPGHISLHAVGQGALGIECVCDRPEVLKIIQVLEHAPTAGRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + G L G+V + DG R G+ D IGR A ++ Sbjct: 239 RELEGGCQVPIGVNSRIDGQELILTGMVASLDGLRLIRDERRGSLTDPEAIGRALAADLK 298 Query: 298 FISNKNVF 305 + Sbjct: 299 SRGAGEIL 306 >gi|254804423|ref|YP_003082644.1| Porphobilinogen deaminase [Neisseria meningitidis alpha14] gi|254667964|emb|CBA04229.1| Porphobilinogen deaminase [Neisseria meningitidis alpha14] Length = 311 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RLK Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLQADAQASAEYADALGRAVAKKLADDG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARELI 303 >gi|159026408|emb|CAO88937.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 319 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 159/305 (52%), Gaps = 5/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIG+R S LAL + ++ L H P + +ST+GD+I + L +IG KGL Sbjct: 8 RSLRIGSRKSQLALVQTYWVQAELSKHH--PHRQFEVETMSTQGDKILDVALAKIGDKGL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-- 121 FT+E+E ++ ID AVHS KD+PT L +GL + R + D + ++ L Sbjct: 66 FTKELEVGMLDRSIDLAVHSLKDLPTNLPEGLILGCVTERVNPADALVVNSENQDYQLDT 125 Query: 122 -ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 +V+GTSSLRR A L ++ D RG + TRL KL+ + AI+LA AG++RL Sbjct: 126 LPEGAVVGTSSLRRLAQLRYHYPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLERLG 185 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + +++ E + GQGA+ IE +P+ E++KV+ H + D ERAFL EL Sbjct: 186 LGDRVHQVIPAEISLHAVGQGALGIECRDADPEVLEVLKVLEHAPSRDRCYAERAFLREL 245 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I + L G+V + DGK + S +G+ +GRD A +R Sbjct: 246 EGGCQVPIGVNTAIEDGILTLTGMVASLDGKRLIKDSVSGDPSHGEVLGRDLAHKVRDAG 305 Query: 301 NKNVF 305 + Sbjct: 306 AGEIL 310 >gi|238018694|ref|ZP_04599120.1| hypothetical protein VEIDISOL_00538 [Veillonella dispar ATCC 17748] gi|237865165|gb|EEP66455.1| hypothetical protein VEIDISOL_00538 [Veillonella dispar ATCC 17748] Length = 319 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 111/312 (35%), Positives = 173/312 (55%), Gaps = 8/312 (2%) Query: 1 MEKKP------FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT 54 M KK RIGTR S LAL A + L ++ P + ++ +TKGDRI + Sbjct: 1 MRKKANAMRDHIRIGTRKSALALWQAEHISAELQRLY--PNITVELVHFNTKGDRILEKP 58 Query: 55 LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT 114 L ++GGKGLFT E+E+ + G+ID AVHS KDMPT+L +GL + A RE D +S Sbjct: 59 LAQVGGKGLFTAELEEAMHKGDIDIAVHSLKDMPTELPEGLTLGAISAREVPYDALVSPV 118 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 ++L L + +GTSSLRR+A LL R D+ V RG ++TRL+K+ K ++LA A Sbjct: 119 YKTLDKLPEGACVGTSSLRRQAQLLHVRPDLKVEVIRGNVQTRLSKIETEKLDGVILAQA 178 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G+KRL + I ++ ++ P+ GQGA+ IE ++ + E++ IN E T +V ER Sbjct: 179 GLKRLGLDDQITQVFKADEMIPAVGQGALAIECRADDTEMLEMLAPINDEATRYAVEGER 238 Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 +FL +L+G C+ + L ++ + DGK +E +G A +G++ A+ Sbjct: 239 SFLRQLNGGCQVPMGVHGTINKGQLILKAMIASLDGKTVYEGEISGPAKKAEILGKNLAK 298 Query: 295 YIRFISNKNVFN 306 + K++ + Sbjct: 299 ALYEEGGKHIVD 310 >gi|313668981|ref|YP_004049265.1| porphobilinogen deaminase [Neisseria lactamica ST-640] gi|313006443|emb|CBN87906.1| putative porphobilinogen deaminase [Neisseria lactamica 020-06] Length = 326 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 168/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 16 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 74 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNRYARLEE 133 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L +++ RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 134 MPKGAVVGTSSLRREAQLRARYPHLAIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 193 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 194 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 253 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG I + A +GR A+ + Sbjct: 254 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSIVLQADAQAPAEYADALGRAVAKKLADDG 313 Query: 301 NKNVF 305 + + Sbjct: 314 ARELI 318 >gi|78212229|ref|YP_381008.1| porphobilinogen deaminase [Synechococcus sp. CC9605] gi|123729770|sp|Q3ALS9|HEM3_SYNSC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78196688|gb|ABB34453.1| porphobilinogen deaminase [Synechococcus sp. CC9605] Length = 317 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 103/308 (33%), Positives = 150/308 (48%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLKITVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + + Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNAKNQAYK 118 Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L SV+GTSSLRR A L + D RG + TRL KL++ ++LA AG+ Sbjct: 119 LETLPEGSVVGTSSLRRLAQLRHHYPHLIFKDVRGNVITRLEKLDSGDYDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +++ E + GQGA+ IE P+ E +KV+ H T ERAFL Sbjct: 179 RLGFSDRIHQLIPGEISLHAVGQGALGIECVEGKPEVLEAIKVLEHTPTSQRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I +G L G+V + DGK +G +A IG A ++ Sbjct: 239 RELEGGCQVPIGVNTRFEGDQLILTGMVASLDGKRLIRDQTSGEASEAEAIGIALANTLK 298 Query: 298 FISNKNVF 305 + Sbjct: 299 GQGAGEIL 306 >gi|262199948|ref|YP_003271157.1| porphobilinogen deaminase [Haliangium ochraceum DSM 14365] gi|262083295|gb|ACY19264.1| porphobilinogen deaminase [Haliangium ochraceum DSM 14365] Length = 320 Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats. Identities = 105/317 (33%), Positives = 160/317 (50%), Gaps = 13/317 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ I TR S LAL A R + V P + ++ + T+GD+I + L++IGG Sbjct: 1 MSERTIHISTRGSQLALWQAHHVRDEIRRVR--PAWQVELVIIKTQGDKILDVPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K LF +EIE+ L+ G D AVHS KD+P +L GL ++A RED D + + L + Sbjct: 59 KALFVKEIEQALLDGRADVAVHSMKDVPAELAPGLFMAATSRREDPYDALCTRDGRGLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LA + +GTSSLRR+ +L R D+ + RG + TRL KL++ A++LA AG+KRL Sbjct: 119 LAEGATLGTSSLRRQCQILARRPDLRIEMLRGNVPTRLGKLDDGSFDAVILAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL-----VKVINHEDTWDSVNCERA 235 + I + L+ P+ GQG + IET + A + ++ V ERA Sbjct: 179 HGERISQRLDGGVCVPAVGQGVLGIETRQGDAPADRELVEALREALHDPAEERRVVAERA 238 Query: 236 FLAELDGSCKSAIAGFAYCKGS------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +A L GSC++ +A A +G TL G+ DG G DA +G Sbjct: 239 MMAALGGSCQTPLAAHASYRGDSDPVAGTLVIEGLCGRPDGSEILRAQVEGRAEDAQALG 298 Query: 290 RDAAQYIRFISNKNVFN 306 A+ +R + + + Sbjct: 299 SSLAEELRGQGAQAIID 315 >gi|78185247|ref|YP_377682.1| porphobilinogen deaminase [Synechococcus sp. CC9902] gi|123770934|sp|Q3AWQ4|HEM3_SYNS9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78169541|gb|ABB26638.1| hydroxymethylbilane synthase [Synechococcus sp. CC9902] Length = 317 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 104/308 (33%), Positives = 154/308 (50%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLTITVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + H + Sbjct: 59 KGLFTKELEAQMLVGRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVLHAKNKHLN 118 Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L +V+GTSSLRR A L + D RG + TRL KL++ ++LA AG+ Sbjct: 119 LATLPEGAVVGTSSLRRLAQLRHHYPHLEFKDVRGNVITRLEKLDSGAYDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I + + + + GQGA+ IE N P E++KV+ H T ERAFL Sbjct: 179 RLGFADRIDQSIPGDISLHAVGQGALGIECVENQPDVMEIIKVLEHGPTSQRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I +G L G+V + DGK +G D +IG + A ++ Sbjct: 239 RELEGGCQVPIGVNTRFEGDQLILTGMVASLDGKRLIREQASGPSTDPESIGLELAATLK 298 Query: 298 FISNKNVF 305 + + Sbjct: 299 GLGAGEIL 306 >gi|222150055|ref|YP_002551012.1| porphobilinogen deaminase [Agrobacterium vitis S4] gi|221737037|gb|ACM38000.1| porphobilinogen deaminase [Agrobacterium vitis S4] Length = 309 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 164/306 (53%), Positives = 212/306 (69%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A ETR L H + P I+ LST GDRIT+R+L EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAHETRERLATAHGLSPDMFEIVVLSTTGDRITDRSLAEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT E+E++L+SG +D AVHS+KDMPT L GL+ISAYLPRED+RD FI TA L + Sbjct: 61 KGLFTLELEQQLLSGGLDFAVHSSKDMPTALPDGLEISAYLPREDMRDAFIGRTAPKLLE 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LA +VIG++SLRR+AL+ R R D+ VI +RG +ETRL KL + A LLA AG+KRL Sbjct: 121 LAEGAVIGSASLRRQALIRRLRPDLQVITYRGAVETRLRKLAAGEVDATLLAVAGLKRLD 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 KE VI + L++E FPP+P QGAICIE V++ + Q+L+ INH T+D+V+CERAFLA L Sbjct: 181 KETVITQYLDLESFPPAPAQGAICIEARVDDRRIQDLLAPINHRPTFDAVSCERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG+A G + G +L DG++ H V G D + +G A + +R + Sbjct: 241 DGSCRTPIAGYAISDGEMIRLTGTILTPDGQVSHSVEAEGRCADGLALGWSAGEKVRDKA 300 Query: 301 NKNVFN 306 F Sbjct: 301 GPGFFE 306 >gi|291279209|ref|YP_003496044.1| porphobilinogen deaminase [Deferribacter desulfuricans SSM1] gi|290753911|dbj|BAI80288.1| porphobilinogen deaminase [Deferribacter desulfuricans SSM1] Length = 305 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 106/303 (34%), Positives = 164/303 (54%), Gaps = 3/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 IGTR S LAL A +S + H ++ + + T GD+I + L +IGGKG Sbjct: 1 MNKLVIGTRGSKLALWQANHIKSLIESTHH---IDVELKIIKTTGDKILDTPLAKIGGKG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE++L++ +D AVHS KD+P +L GL++ + RE+ D F+S SL +L Sbjct: 58 LFVKEIEEELLNKNVDIAVHSMKDVPVELPDGLEVGVFPVREEPYDAFLSVKYNSLDELP 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRRK L+R + + D RG ++TR+ KL + AI+LA AG+KRL Sbjct: 118 DGAVIGTSSLRRKIQLMRKYPHLVIKDLRGNVDTRIRKLTEGQYDAIILAKAGLKRLGLL 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + +K+ ++ P+ QG + IE ++ Q+++ +NHE+T ERAFL L+G Sbjct: 178 EHVKQTIDDTLMIPAVCQGTLGIEYREDDQDVQKVIGFLNHEETVFRTKAERAFLKRLEG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ + A G L G + DG + G++ DA+ +G A+ I K Sbjct: 238 GCQVPLGCIANLVGDRLILKGFLANLDGSKYIYEEIEGDKTDAVKLGLKLAKNILGQGGK 297 Query: 303 NVF 305 + Sbjct: 298 EII 300 >gi|317486609|ref|ZP_07945428.1| porphobilinogen deaminase [Bilophila wadsworthia 3_1_6] gi|316922143|gb|EFV43410.1| porphobilinogen deaminase [Bilophila wadsworthia 3_1_6] Length = 308 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 116/306 (37%), Positives = 161/306 (52%), Gaps = 5/306 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK I TR S LAL A + SL VH P + + + TKGD I + L ++GG Sbjct: 1 MEK--LVIATRGSRLALWQANHVKDSLEAVH--PGLAVELNIIKTKGDIILDVPLAKVGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L+SG D AVHS KD+P +L +GL + RED D+F+S SL++ Sbjct: 57 KGLFVKEIEEALLSGAADIAVHSMKDVPMELPEGLILGIVPEREDPTDLFLSVDYDSLEN 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A +L R D+ V+ RG ++TRL KL + AI++A AG+KRL Sbjct: 117 LPAGAVVGTSSLRRQAQVLAQRPDLEVVSLRGNVDTRLRKLTEGQFAAIIMATAGMKRLG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + L F P+ GQGA+ IE + E++ + H T V ER LA L Sbjct: 177 LSVPKECPLAPPAFIPAVGQGALGIEFREDRKDLAEMLSFMEHRPTRICVEAERGLLAGL 236 Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DG C+ IAG A T G+V DG + G +A +G A+ + Sbjct: 237 DGGCQVPIAGHAEMLDDGTFELEGLVGEVDGSVIIRRKVTGRADEARAVGFALARSLAED 296 Query: 300 SNKNVF 305 + Sbjct: 297 GGAEIL 302 >gi|67924108|ref|ZP_00517554.1| Porphobilinogen deaminase [Crocosphaera watsonii WH 8501] gi|67854033|gb|EAM49346.1| Porphobilinogen deaminase [Crocosphaera watsonii WH 8501] Length = 318 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 104/307 (33%), Positives = 161/307 (52%), Gaps = 5/307 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RIG+R S LAL + + L + P + +ST+GD+I + L +IG K Sbjct: 4 SSRAIRIGSRKSQLALVQTYWIQEQLQKHY--PDRQFDVETMSTQGDKILDVALAKIGDK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQSL 118 GLFT+E+E ++ ++D AVHS KD+PT L +GL + R + D + H + L Sbjct: 62 GLFTKELETAMLQNQVDFAVHSLKDLPTNLPEGLMLGCVTERVNPADALVVHEKHRDKQL 121 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L SVIGTSSLRR A L ++ D RG + TRL KL++ + AI+LA AG++R Sbjct: 122 DTLPEGSVIGTSSLRRLAQLRHHYPHLTFKDVRGNVNTRLGKLDSGEYDAIILAVAGLQR 181 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L I +++ + + GQGA+ IE +P+ EL+KV+ +T D ERAFL Sbjct: 182 LDMSDRIHQVIPDDISLHAVGQGALGIECRTGDPEILELLKVLEDTETRDRCYAERAFLR 241 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +L+G C+ I + + L G+V + DGK + + G A ++G+ A +R Sbjct: 242 QLEGGCQVPIGVNTKIENNVLTLIGMVASLDGKTLIKDTIEGEPSQAESLGQTLATRLRD 301 Query: 299 ISNKNVF 305 + Sbjct: 302 AGATEIL 308 >gi|258591837|emb|CBE68140.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [NC10 bacterium 'Dutch sediment'] Length = 315 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 160/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++GTR SPLAL A L + P ++ I+P+ T GD+ + L+++GG Sbjct: 1 MRSHTVKLGTRGSPLALCQAGLVTEELRR--RWPDLDVTIVPIKTSGDKFLDVVLSQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L+ G ID AVHS KD+P +L GL A + RED D ++ D Sbjct: 59 KGLFVKEIEEALLDGRIDLAVHSLKDLPAELAPGLCEGAVMRREDPLDALVARNGLRFTD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSSLRR+ L R D+ + RG ++TRLNKL A++LA AG+ RL Sbjct: 119 LPRGARIGTSSLRRQVQFLHCRPDLQIESLRGNVQTRLNKLETLGLEAVVLAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I E L + P+ GQGA+ IE ++ + E V+ +NH +T + ERAFL L Sbjct: 179 LQDRITERLQPDLCLPAIGQGALVIEIREDDRQTAERVETLNHRETRQATTAERAFLRRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC + IA F +G TL G+V DGK + G +G+ A + Sbjct: 239 GGSCVTPIAAFGRLEGETLELTGMVAGLDGKRLLRQAVVGEAGAPEQVGQTLADRLLSAG 298 Query: 301 NKNVF 305 + Sbjct: 299 AGEII 303 >gi|225075410|ref|ZP_03718609.1| hypothetical protein NEIFLAOT_00415 [Neisseria flavescens NRL30031/H210] gi|224953228|gb|EEG34437.1| hypothetical protein NEIFLAOT_00415 [Neisseria flavescens NRL30031/H210] Length = 325 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 72 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 132 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 133 MPKGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 312 Query: 301 NKNVF 305 + + Sbjct: 313 AEELI 317 >gi|87123876|ref|ZP_01079726.1| Porphobilinogen deaminase [Synechococcus sp. RS9917] gi|86168445|gb|EAQ69702.1| Porphobilinogen deaminase [Synechococcus sp. RS9917] Length = 317 Score = 255 bits (650), Expect = 7e-66, Method: Composition-based stats. Identities = 103/308 (33%), Positives = 152/308 (49%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALEHLRIASRRSQLAMVQTNWVKAELEQAH--PGLPISVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E +++ G + AVHS KD+PT L +GL + RED D + + + Sbjct: 59 KGLFTKELEAQMLVGRAEIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVNAKNADHK 118 Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L +V+GTSSLRR A L + D RG + TRL KL+ ++LA AG+ Sbjct: 119 LETLPEGAVVGTSSLRRLAQLRHHYPHLEFKDVRGNVITRLEKLDAGDYDCLILAAAGLT 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +I+ + GQGA+ IE P EL+KV+ H T ERAFL Sbjct: 179 RLGFADRIHQIIPSHISLHAVGQGALGIECVEGQPDVLELIKVLEHSPTASRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + + L G+V + DGK R G A IG+ A ++ Sbjct: 239 RELEGGCQVPIGVNTRIEANELVLTGMVASLDGKRLIRDERRGTVDKAEAIGQLLAADLK 298 Query: 298 FISNKNVF 305 ++ Sbjct: 299 SQGAGDIL 306 >gi|319639194|ref|ZP_07993945.1| porphobilinogen deaminase [Neisseria mucosa C102] gi|317399378|gb|EFV80048.1| porphobilinogen deaminase [Neisseria mucosa C102] Length = 325 Score = 255 bits (650), Expect = 7e-66, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDRTLSKVGG 72 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 132 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 133 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 312 Query: 301 NKNVF 305 + + Sbjct: 313 AEELI 317 >gi|284799715|ref|ZP_05984671.2| hydroxymethylbilane synthase [Neisseria subflava NJ9703] gi|284797316|gb|EFC52663.1| hydroxymethylbilane synthase [Neisseria subflava NJ9703] Length = 323 Score = 255 bits (650), Expect = 7e-66, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDRTLSKVGG 72 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFTLAAISERANPFDAFVSNQYARLEE 132 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 133 MPKGAVVGTSSLRREAQLRVRYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 312 Query: 301 NKNVF 305 + + Sbjct: 313 AEELI 317 >gi|241759313|ref|ZP_04757419.1| hydroxymethylbilane synthase [Neisseria flavescens SK114] gi|241320449|gb|EER56746.1| hydroxymethylbilane synthase [Neisseria flavescens SK114] Length = 325 Score = 255 bits (650), Expect = 8e-66, Method: Composition-based stats. Identities = 103/305 (33%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL+++GG Sbjct: 15 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDRTLSKVGG 72 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 73 KGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 132 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 133 MPKGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 192 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 193 LDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARAL 252 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 253 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPAEYADALGRAVAKKLADDG 312 Query: 301 NKNVF 305 + + Sbjct: 313 AEELI 317 >gi|134300009|ref|YP_001113505.1| porphobilinogen deaminase [Desulfotomaculum reducens MI-1] gi|189028090|sp|A4J6H7|HEM3_DESRM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|134052709|gb|ABO50680.1| hydroxymethylbilane synthase [Desulfotomaculum reducens MI-1] Length = 309 Score = 255 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 156/305 (51%), Gaps = 2/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K +G+R S LAL L + P I + TKGD++ + L +IG K Sbjct: 1 MKHKITVGSRDSALALWQTRWVVEQLEKQN--PDVTFEITTMKTKGDKMLDVALAKIGDK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT+E+E ++ EID AVHS KDMPT L +GL I A R++ D IS + L +L Sbjct: 59 GLFTKELEVAMLQKEIDFAVHSLKDMPTALPEGLIIGAVCKRDNPGDALISKDGRKLDEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSSLRR A LL +R D + RG + TR+ KL + + I+LA AGI R+ Sbjct: 119 PKGARIGTSSLRRCAQLLNYRPDFQLEALRGNLNTRMKKLVSEQLDGIILAAAGITRMGW 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E +I EI+ + P+ GQGAI +E ++P+ L+K I H +T + ER+ L L+ Sbjct: 179 EDMIAEIIPFQVCLPAVGQGAISVECREDDPEILNLLKGIEHTETKAATEAERSLLRYLE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I + K + L +V DG A+ +G + A+ + + Sbjct: 239 GGCQVPIGAHSEVKNNRLMLTAVVATLDGTKVIRAQGENEVNKAVELGIEVAEKLMAMGG 298 Query: 302 KNVFN 306 K + Sbjct: 299 KKILE 303 >gi|309379620|emb|CBX21791.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 326 Score = 255 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 168/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 16 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 74 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNRYARLEE 133 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L +++ RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 134 MPESAVVGTSSLRREAQLRARYPHLAIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 193 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 194 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 253 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG I + A +GR A+ + Sbjct: 254 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSIVLQADAQAPAEYADALGRAVAKKLADDG 313 Query: 301 NKNVF 305 + + Sbjct: 314 ARELI 318 >gi|123965794|ref|YP_001010875.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9515] gi|158512730|sp|A2BVF7|HEM3_PROM5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123200160|gb|ABM71768.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9515] Length = 316 Score = 254 bits (649), Expect = 9e-66, Method: Composition-based stats. Identities = 97/308 (31%), Positives = 159/308 (51%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +I +R S LA+ + L IP + I ++T+GD+I + L +IG Sbjct: 1 MTKLKLKIASRRSKLAMVQTLWVKEQLEK--NIPNLEVSIESMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK- 119 KGLFT+E+E +++ G+ D AVHS KD+PT L GL++ RED D + + + Sbjct: 59 KGLFTKELEAQMLIGKADIAVHSLKDLPTNLPDGLKLGCITKREDPSDALVVNKKNEIYQ 118 Query: 120 --DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L S++GTSSLRR A L ++ D RG + TR+ KL++ + I+LA AG+K Sbjct: 119 LESLPAGSIVGTSSLRRLAQLRYKFPYLNFKDIRGNVITRIEKLDSGEFDCIILAAAGLK 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL E I +I+ E + GQGA+ IE + + +++ V+ + + ER+FL Sbjct: 179 RLGFESRIHQIIPNEISLHAVGQGALGIECKSEDKEVLKIISVLEDKASSQKCLAERSFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + + + G+V + DGK + +GN +G+ A+ ++ Sbjct: 239 RELEGGCQVPIGVNSSIQNDEICLKGMVASIDGKKLIKDESSGNVKYPEEVGKKLAEKLK 298 Query: 298 FISNKNVF 305 + Sbjct: 299 LQGADKIL 306 >gi|86604967|ref|YP_473730.1| porphobilinogen deaminase [Synechococcus sp. JA-3-3Ab] gi|86553509|gb|ABC98467.1| porphobilinogen deaminase [Synechococcus sp. JA-3-3Ab] Length = 310 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 102/303 (33%), Positives = 156/303 (51%), Gaps = 5/303 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R S LALA + L H P + + LST+GD I + L +IG KGLFT Sbjct: 1 MRIASRKSELALAQTYWVMGQLQAHH--PGLPLELHTLSTQGDIILDVALAKIGDKGLFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLA 122 +E+E L++G D AVHS KD+PT+L +GL + A RED D + L L Sbjct: 59 KELEVSLLNGSSDLAVHSLKDLPTRLPEGLVLGAITQREDPLDALVLREELRGYQLATLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR A L + + RG + TRL KL+ + ++LA AG+KRL +E Sbjct: 119 AGTVIGTSSLRRLAQLRHAFPHLQFKNVRGNLNTRLAKLDRGEYDGLILAVAGLKRLGQE 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I E+L+ + GQG++ IE + + EL++ + + ERAFL L+G Sbjct: 179 QRIHEVLDPSVSLYAVGQGSLGIECRQGDERILELIRPLADAEATARCLAERAFLRALEG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I + +G L+ G+V +G+ ++ G+ D +G A+ ++ Sbjct: 239 GCQVPIGVHSQVQGEELHLTGMVADLEGRQLIRDTQTGSTADPEAVGMALAEKLKRQGAD 298 Query: 303 NVF 305 + Sbjct: 299 EIL 301 >gi|288957245|ref|YP_003447586.1| hydroxymethylbilane synthase [Azospirillum sp. B510] gi|288909553|dbj|BAI71042.1| hydroxymethylbilane synthase [Azospirillum sp. B510] Length = 312 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 134/307 (43%), Positives = 175/307 (57%), Gaps = 2/307 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEI 58 M P RIGTR SPLALA A ETR L+ H P I I+ T GDRI +RTL E Sbjct: 1 MTTHPLRIGTRGSPLALAQAHETRDRLIAAHPHLAAPGAIEIVVFKTTGDRILDRTLAEA 60 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLFT+E+E+ L G D AVHS KD+PT+L GL+I+ LPRED RD F S + L Sbjct: 61 GGKGLFTKELEEALFDGRADLAVHSMKDVPTQLPDGLEIATLLPREDPRDAFFSRSGGGL 120 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 DL +V+GT+ LRR+A +L R D+ + RG ++TRL+KL+ + A LLA AG++R Sbjct: 121 ADLPAGAVVGTAGLRRQAQVLELRPDLRIFPLRGNVQTRLSKLDAGEVDATLLALAGLRR 180 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L I +L E P+ QGAI IE + + L+ +N +T V ERA LA Sbjct: 181 LGLTGRISAVLEPETMLPAVAQGAIGIEIRSADDATRALLAPLNCAETMVRVTAERALLA 240 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 LDGSC++ IA A G L+ VL+ DG+ R G +A ++G DA IR Sbjct: 241 ALDGSCRTPIAALALLDGDALHLRAKVLSCDGRSIFRAERRGKAANAESLGADAGAEIRA 300 Query: 299 ISNKNVF 305 + F Sbjct: 301 QLPPDFF 307 >gi|269215203|ref|ZP_05987933.2| hydroxymethylbilane synthase [Neisseria lactamica ATCC 23970] gi|269208048|gb|EEZ74503.1| hydroxymethylbilane synthase [Neisseria lactamica ATCC 23970] Length = 326 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 16 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 73 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 74 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNRYARLEE 133 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L +++ RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 134 MPESAVVGTSSLRREAQLRARYPHLAIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 193 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 194 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 253 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 254 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILRADAQAPAGYADALGRAVAKKLADDG 313 Query: 301 NKNVF 305 + + Sbjct: 314 ARELI 318 >gi|33861052|ref|NP_892613.1| porphobilinogen deaminase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|39931394|sp|Q7V2I1|HEM3_PROMP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|33639784|emb|CAE18954.1| Porphobilinogen deaminase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 316 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 96/308 (31%), Positives = 156/308 (50%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +I +R S LA+ + L IP + I ++T+GD+I + L +IG Sbjct: 1 MTKFKLKIASRRSKLAMVQTLWVKEQLEK--NIPDLEVSIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK- 119 KGLFT+E+E +++ G D AVHS KD+PT L GL + RED D + + + Sbjct: 59 KGLFTKELEAQMLVGHADIAVHSLKDLPTNLPDGLTLGCITKREDPSDALVVNKKNKIYQ 118 Query: 120 --DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L S++GTSSLRR A L + D RG + TR+ KL++ + I+LA AG+K Sbjct: 119 LESLPPGSIVGTSSLRRLAQLRYKFPHLDFKDIRGNVITRIEKLDSGEFDCIILAAAGLK 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL E + +I+ E + GQGA+ IE ++ + +++ V+ + + ER+FL Sbjct: 179 RLGFESRVHQIIPNEISLHAVGQGALGIECKSDDKEVLKIISVLEDKVSSQRCLAERSFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + + + G+V + DGK + GN +G+ A+ ++ Sbjct: 239 RELEGGCQVPIGVNSSIQNDEIALIGMVASIDGKRLIKNESIGNIKYPEEVGKKLAEKLK 298 Query: 298 FISNKNVF 305 + Sbjct: 299 LQGADKIL 306 >gi|94676875|ref|YP_588539.1| porphobilinogen deaminase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|123384158|sp|Q1LU25|HEM3_BAUCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|94220025|gb|ABF14184.1| porphobilinogen deaminase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 311 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 99/305 (32%), Positives = 160/305 (52%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +I TR SPLA+ A R+ L+ + P I ++P+ T GD I ++ L + GG Sbjct: 1 MLNNILKIATRQSPLAIWQANYVRNQLLSFY--PTLLIELVPIVTSGDLILDKPLMKAGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K LF +E+E+ ++ D AVHS KD+ +G+ ++ RED RD FIS S+ Sbjct: 59 KRLFIKELEQAMLERRADIAVHSMKDITISFPEGIGLAVLCAREDPRDAFISTHYASIDL 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSS+RR+ L R D+ + D RG I TRL KL+ + A++LA AG+KRL Sbjct: 119 LPTGAVVGTSSMRRQCQLRERRPDLVMRDLRGNIGTRLEKLDKGEYDALILAAAGLKRLD 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ I++ + P+ GQG I IE + + ++ ++H T V+ ERA A+L Sbjct: 179 LAHRIRMIIDPTELLPAVGQGVIGIEYRLEDTHILSILAPLHHSATALRVSAERAMNAKL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I +A +G ++ +V + DG + A +G+ A + + Sbjct: 239 AGGCQVPIGSYAEIEGDQIWLRALVGSPDGSLIIRSEGRAPLSQAEILGQSIANDLLYRG 298 Query: 301 NKNVF 305 +++ Sbjct: 299 AESIL 303 >gi|253991598|ref|YP_003042954.1| porphobilinogen deaminase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253783048|emb|CAQ86213.1| porphobilinogen deaminase [Photorhabdus asymbiotica] Length = 313 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 165/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A + L + P + ++P+ T+GD I + L ++GG Sbjct: 1 MSTKTIRIATRQSPLAMWQALYVQQKLQQFY--PDLEVQLVPMVTQGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + R+D RD F+S SL + Sbjct: 59 KGLFVKELELALLEGRADIAVHSMKDVPISFPEGLGLVTICERDDPRDAFVSAKYHSLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+++ D RG + TRL+KL+N AI+LA AG+KRL+ Sbjct: 119 LPTGSIVGTSSLRRQCQLRELRPDLTIRDLRGNVGTRLSKLDNGHYDAIILAVAGLKRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ L+ + P+ GQGA+ IE +++ + + L+ +NH DT V ER L Sbjct: 179 LHDRIRTPLSAKQLLPAVGQGAVGIECRLDDQQTRALLAPLNHYDTEICVLAERTMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I +A + ++ +V A DG + R DA G + A+ + Sbjct: 239 EGGCQVPIGSYAIWQDGKIWLRALVGAPDGSVIIRGERTVLPKDACQAGLELAEELLERG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AREIL 303 >gi|224826001|ref|ZP_03699104.1| porphobilinogen deaminase [Lutiella nitroferrum 2002] gi|224601638|gb|EEG07818.1| porphobilinogen deaminase [Lutiella nitroferrum 2002] Length = 311 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 108/301 (35%), Positives = 166/301 (55%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A ++ L ++ P + I+ ++T+GD+I ++TL++IGGKGLF Sbjct: 3 KIVIASRESKLAMWQAEHIKARLEQLY--PQLAVEILGMTTQGDQILDKTLSKIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A RED RD F+S+T SL +L Sbjct: 61 VKELELALQEGRADLAVHSIKDVPMNLPEGFALAAICEREDPRDAFVSNTYASLSELPDG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR++ L +++ RG ++TRL KL++ + AI+LA AG+KRL+ Sbjct: 121 AVVGTSSLRRESQLRARFPRLTIKPLRGNVQTRLRKLDDGEFDAIILAAAGLKRLELSAR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ L + P+ GQGA+ IE + +L+ ++H DT V+ ERA L GSC Sbjct: 181 IRCELAPSESLPAVGQGALGIEIRADRADLMQLLAPLDHADTHACVSAERALSRVLGGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + + GFA + G V DG + S + R A +GR AQ + + Sbjct: 241 QIPLGGFATLSDDVITLGGFVAHPDGSVMLTASASAPREYADALGRAVAQKLLDAGAAPL 300 Query: 305 F 305 Sbjct: 301 I 301 >gi|318041172|ref|ZP_07973128.1| porphobilinogen deaminase [Synechococcus sp. CB0101] Length = 317 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 105/309 (33%), Positives = 153/309 (49%), Gaps = 5/309 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ R L H+ I I ++T+GD+I + L +IG Sbjct: 1 MAASQLRIASRRSQLAMVQTHWVRDELAKAHE--GLEITIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117 KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + H ++ Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVHEKHKDKT 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L SV+GTSSLRR A L ++ D RG + TRL KL++ + ++LA AG+ Sbjct: 119 LATLPEGSVVGTSSLRRLAQLRHHFPHLTFKDVRGNVITRLEKLDSGEFDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I E+++ + GQGA+ IE + E +KV+ H T ERAFL Sbjct: 179 RLGLGDRIHELIDPSISLHAVGQGALGIECREGDTAVLEQIKVLEHLPTARRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I +G L G+V + DG+ G++ D IG A +R Sbjct: 239 RELEGGCQVPIGVNTRFEGDELVLTGMVASLDGQRLIRDEARGDQKDPEAIGIALAHALR 298 Query: 298 FISNKNVFN 306 + Sbjct: 299 AQGAGEILE 307 >gi|251773212|gb|EES53764.1| porphobilinogen deaminase [Leptospirillum ferrodiazotrophum] Length = 321 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 111/302 (36%), Positives = 160/302 (52%), Gaps = 4/302 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LAL A + + + + T GD I + L+++GGKGLF Sbjct: 9 PIRIGTRGSELALWQARHVAAMIR---HTAGLESELTIIKTTGDMILSVPLSQVGGKGLF 65 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE+ LI+G ID AVHS KD+P L +GL+I A L RED RD F+S+ S L Sbjct: 66 VKEIEEALIAGTIDLAVHSMKDVPAFLPEGLEIGAILSREDPRDAFVSNAYSSFSSLPPG 125 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGTSSLRR A L + R D+ RG + TRL KL+ N+ AI+LA AG+ RL Sbjct: 126 ARIGTSSLRRMAQLKKRRPDLRFESLRGNVGTRLRKLDENQIDAIILAAAGLIRLGFSDR 185 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+E L +E P+ GQGA+ +E + + + ++ ++ +T V ER L+ LDG C Sbjct: 186 IREYLPVELSLPAVGQGALGLECRTGDHRIRTILARMHDPETTACVLAERGVLSALDGGC 245 Query: 245 KSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 + IA A + +L +G E +G +A +G +AAQ + + Sbjct: 246 QLPIAAHARTISPEQIELIARILDVEGTTLLEEHTSGPAKEAHRLGVEAAQKLLSRGGQK 305 Query: 304 VF 305 + Sbjct: 306 IL 307 >gi|212633296|ref|YP_002309821.1| porphobilinogen deaminase [Shewanella piezotolerans WP3] gi|212554780|gb|ACJ27234.1| Porphobilinogen deaminase [Shewanella piezotolerans WP3] Length = 294 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 104/290 (35%), Positives = 161/290 (55%), Gaps = 2/290 (0%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + A ++ L +H+ + ++P+STKGD I + L ++GGKGLF +E+E ++ Sbjct: 1 MWQAEFVKAELEKIHE--GLTVELLPMSTKGDIILDTPLAKVGGKGLFVKELEVAMLEDR 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 D AVHS KD+P +GL + RED RD F+S+ S+ +L +V+GTSSLRR+ Sbjct: 59 ADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNNFSSINELPQGAVVGTSSLRRQC 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 + R D+ + D RG + TRL KL+ AI+LA AG+KRLK E+ I ++ ED P Sbjct: 119 QIRAARPDLQIKDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLKLEERITSFISAEDSLP 178 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + GQGA+ IE ++ + + L+ + H +T V ERA L+G C+ I +A G Sbjct: 179 ANGQGAVGIECRTDDARVKALLAPLEHLETRQRVIAERAMNTRLEGGCQVPIGAYAEIDG 238 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 TL G+V DG E + +GN+ DA +G A+ + K + + Sbjct: 239 DTLSLRGLVGNPDGSQVIEAATSGNKNDAEQLGVALAEELLSKGAKTILD 288 >gi|188996629|ref|YP_001930880.1| porphobilinogen deaminase [Sulfurihydrogenibium sp. YO3AOP1] gi|188931696|gb|ACD66326.1| porphobilinogen deaminase [Sulfurihydrogenibium sp. YO3AOP1] Length = 310 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 107/306 (34%), Positives = 176/306 (57%), Gaps = 8/306 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL A L ++H + ++ ++T+GD+I + L +IGGKGLF Sbjct: 2 KIRIGTRKSQLALWQANYIADRLREIH---GIEVELVKITTQGDKILDVPLAKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE L+ EID AVHS KD+PT L +GL++ A RED RD F+S +++ L + Sbjct: 59 VKEIEDALLRNEIDIAVHSLKDVPTVLPEGLELIAITEREDPRDAFLSIRYENIYQLPEN 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +VIGTSSLRRK+ +++ R D+ + D RG ++TR+ KL + AI+LAYAG+KRL + Sbjct: 119 TVIGTSSLRRKSQIMKIRKDLQIKDLRGNVDTRIRKLEEGQYDAIILAYAGLKRLGLDSK 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 +K I + ++ P+ QG + IE ++ + + L+K +NH +++ ER+FL L+G C Sbjct: 179 VKYIFSPDEMIPAVCQGFLAIEGRSDDERIKNLIKPLNHYESYLRATAERSFLKTLEGGC 238 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----NGNRCDAINIGRDAAQYIRFI 299 + + + K ++ G + +GK +++ + AI +G+ A+ + Sbjct: 239 QVPLGAYCEIKENSFIITGFIADLEGKEYYQEKMIEQIKENPQEQAIILGKTLAEKLLND 298 Query: 300 SNKNVF 305 K + Sbjct: 299 GGKQIL 304 >gi|297583719|ref|YP_003699499.1| porphobilinogen deaminase [Bacillus selenitireducens MLS10] gi|297142176|gb|ADH98933.1| porphobilinogen deaminase [Bacillus selenitireducens MLS10] Length = 312 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 110/308 (35%), Positives = 175/308 (56%), Gaps = 7/308 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +G+R S LA+ S L + P I ++T+GD I + TL+++GG Sbjct: 1 MT-RTITLGSRRSNLAMTQTRWVISELEKLGL--PFQFEIKEITTRGDEILDVTLSKVGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ + +GEID AVHS KD+P+ +GL +++ R D RD IS++ ++L + Sbjct: 58 KGLFVKEIEQAMHNGEIDMAVHSMKDVPSTRSEGLVLASVPKRYDPRDALISNSGKTLME 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR + +L R D+ + RG I+TRL K AI+LA AG++R+ Sbjct: 118 LPAGSIVGTSSLRRGSQVLAKRPDLEIQWIRGNIDTRLRKCREENFDAIILAAAGLERVG 177 Query: 181 K-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E ++ E L+ + P+ GQGA+ +E ++ + +EL+ INHE T +V ERAFL Sbjct: 178 WTEDIVTEFLDPDLCLPAVGQGALGLECREDDYELRELLAHINHEQTAITVAAERAFLRT 237 Query: 240 LDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 ++G C+ I +A + ++ +V ++DGK + S G D IG + A+ I Sbjct: 238 VEGGCQVPIGAYATLDEQNQIHLTALVASTDGKQVFKESIIG--EDPEYIGTEVAERILR 295 Query: 299 ISNKNVFN 306 K V + Sbjct: 296 QGAKGVLD 303 >gi|118602764|ref|YP_903979.1| porphobilinogen deaminase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|226740639|sp|A1AX51|HEM3_RUTMC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|118567703|gb|ABL02508.1| porphobilinogen deaminase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 304 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 166/304 (54%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K +I TR SPLAL A + L H P ++++ ++TKGD+I N L++IGGK Sbjct: 1 MNKTLKIATRQSPLALWQAQNVKIRLEKHH--PDLTVILVEMTTKGDQILNSPLSKIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E ++ G D AVHS KD+P ++ +G ++ A L RE+ D F+S+ S+ DL Sbjct: 59 GLFIKELEVSMMKGITDIAVHSMKDVPYEIPQGFKLGAILKRENPFDAFVSNDFSSIDDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++ +GT S+RR L R D+ ++D RG + TRL KL+ I+LA AG+ RL Sbjct: 119 PQNAKVGTCSIRRIVQLKAIRPDLKILDLRGNVNTRLKKLDKGGFDGIILACAGLIRLGF 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E IK+ ++ + P+ GQG + IE N+ + +L+K + +T V+ ERA A L+ Sbjct: 179 ESRIKQQISDQQSLPAVGQGVVGIEIRENDTEILDLIKPLIDVETTYMVSAERAMNARLE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C IAGFA + G+V D + + + A +G + A + + Sbjct: 239 GGCSVPIAGFALIDNEQIMLTGLVGNVDTGVILKEQILSHVSQAEALGVELANKLISLGA 298 Query: 302 KNVF 305 K++ Sbjct: 299 KDIL 302 >gi|269798482|ref|YP_003312382.1| porphobilinogen deaminase [Veillonella parvula DSM 2008] gi|282849932|ref|ZP_06259315.1| hydroxymethylbilane synthase [Veillonella parvula ATCC 17745] gi|269095111|gb|ACZ25102.1| porphobilinogen deaminase [Veillonella parvula DSM 2008] gi|282580369|gb|EFB85769.1| hydroxymethylbilane synthase [Veillonella parvula ATCC 17745] Length = 312 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 107/301 (35%), Positives = 169/301 (56%), Gaps = 2/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + L ++ P + ++ +TKGDRI + L ++GGKGLFT Sbjct: 5 IRIGTRKSALALWQAEHISAELQRLY--PNITVELVHFNTKGDRILEKPLAQVGGKGLFT 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E+E+ + +G+ID AVHS KDMPT+L +GL + A RE D +S ++L L + Sbjct: 63 AELEEAMHAGDIDIAVHSLKDMPTELPEGLTLGAISAREVPYDALVSPVYKTLDKLPQGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A LL R D+ V RG ++TRL+K+ K ++LA AG+KRL E I Sbjct: 123 RVGTSSLRRQAQLLHVRPDLKVEVIRGNVQTRLSKIETEKLDGVILAQAGLKRLGLEDQI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ ++ P+ GQGA+ IE ++ + +++ IN E T +V ER+FL +L+G C+ Sbjct: 183 TQVFKADEMIPAVGQGALAIECRADDTEMLDMLDPINDEATRYAVEGERSFLRQLNGGCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + L ++ + DGK +E +G +G++ A+ + K + Sbjct: 243 VPMGVHGTINKGQLTLKAMIASLDGKTVYEGEISGPAKKGEILGKNLAKALYEEGGKRIV 302 Query: 306 N 306 + Sbjct: 303 D 303 >gi|16330297|ref|NP_441025.1| porphobilinogen deaminase [Synechocystis sp. PCC 6803] gi|2495177|sp|P73660|HEM3_SYNY3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|1652786|dbj|BAA17705.1| porphobilinogen deaminase [Synechocystis sp. PCC 6803] Length = 320 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 103/304 (33%), Positives = 157/304 (51%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIG+R S LAL + + L P + + T+GD+I + L +IG KGLF Sbjct: 9 TVRIGSRKSQLALVQTYWVQEELQK--HFPDRQFDVETMETQGDKILDVALAKIGDKGLF 66 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL--- 121 T+E+E ++ D AVHS KD+PT L GL + R + D + + KDL Sbjct: 67 TQELEDGMLGKRTDLAVHSLKDLPTNLPAGLMLGCVTKRVNPADALVLNAKHQGKDLASL 126 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +VIGTSSLRR A L ++ D RG + TRL KL++N+ AI+LA AG++RL Sbjct: 127 PEGAVIGTSSLRRLAQLRYHFPHLTFKDVRGNVNTRLAKLDSNEYDAIILAAAGLERLDM 186 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I +++ E + GQGA+ IE + + L+KV+ E++ D ERAFL +L+ Sbjct: 187 ANRIDQLIPPEISLHAVGQGALGIECREGDQEILSLLKVLEDENSRDRCLAERAFLRQLE 246 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I + G L G+V + DG+ + + + R +A +G+D A +R Sbjct: 247 GGCQVPIGVNTHLDGDNLTLTGMVASLDGQRLIKDTLSAPRKEAEKLGQDLALKLREQGA 306 Query: 302 KNVF 305 + Sbjct: 307 GEIL 310 >gi|225023639|ref|ZP_03712831.1| hypothetical protein EIKCOROL_00499 [Eikenella corrodens ATCC 23834] gi|224943521|gb|EEG24730.1| hypothetical protein EIKCOROL_00499 [Eikenella corrodens ATCC 23834] Length = 312 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 163/305 (53%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M I +R S LA+ A +S L ++ P + I+ L+T+GDRI ++TL++IGG Sbjct: 1 MIPHKLVIASRESALAMWQAEHIQSRLRTLY--PGCEVSILGLTTQGDRILDKTLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A RE D F+S+ Q L+D Sbjct: 59 KGLFVKELEQALSDGRADLAVHSIKDVPMVLPEGFALAAICERESPFDAFVSNNYQRLED 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 119 LPAGAVVGTSSLRREAQLRARFPQLQVAPLRGNVQTRLAKLDQGDYAAIILAEAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ D P+ GQGA+ IE + + L+ +NH T V ERA L Sbjct: 179 LTQRIRHTLSPADSLPAAGQGALGIEIAAHRSELLPLLAPLNHAQTAACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L +G+V DG + R A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTKQDGLLTLHGLVGHPDGSVILREEAQAPREYADALGRAVAKKLADNG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AQELI 303 >gi|240112249|ref|ZP_04726739.1| porphobilinogen deaminase [Neisseria gonorrhoeae MS11] gi|268598310|ref|ZP_06132477.1| porphobilinogen deaminase [Neisseria gonorrhoeae MS11] gi|268582441|gb|EEZ47117.1| porphobilinogen deaminase [Neisseria gonorrhoeae MS11] Length = 311 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG I + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKLADDG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AQELI 303 >gi|296136292|ref|YP_003643534.1| porphobilinogen deaminase [Thiomonas intermedia K12] gi|294340528|emb|CAZ88912.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Thiomonas sp. 3As] gi|295796414|gb|ADG31204.1| porphobilinogen deaminase [Thiomonas intermedia K12] Length = 317 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 101/303 (33%), Positives = 160/303 (52%), Gaps = 5/303 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A R L ++ P ++ I ++T+GD+I +++L +IGGKGLF Sbjct: 11 LVIATRESRLALWQAEHVRDLLKGLY--PQCDVRIFGMTTQGDQILDKSLAKIGGKGLFV 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E + G D AVHS KD+P L G ++A + RED RD ++S +L DL + Sbjct: 69 KELEVAMEQGHADLAVHSLKDVPMVLPTGFALTAVMEREDPRDAWVSPHYANLADLPAGA 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR++ L + V RG ++TRL KL+ + ILLA AG+KRL + + Sbjct: 129 VVGTSSLRRESQLRARYPHLKVQALRGNLDTRLRKLDEGQYAGILLAAAGLKRLGLGERV 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ ED P+ GQ A+ IE + P + + +NH T + ERA L GSC Sbjct: 189 RAVIEPEDMLPAVGQAALGIEIRADRPDLAQALAALNHPPTALCTHAERAVSRGLGGSCT 248 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNK 302 + + +A +G ++ ++ DG + G + A +G+ A+ +R Sbjct: 249 TPMGAYATLEGEAMHLRAVLGLPDGSQALHAQQRGRVTDLAQAEALGQQVARQLREQGAD 308 Query: 303 NVF 305 + Sbjct: 309 ALL 311 >gi|237756363|ref|ZP_04584911.1| porphobilinogen deaminase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691477|gb|EEP60537.1| porphobilinogen deaminase [Sulfurihydrogenibium yellowstonense SS-5] Length = 310 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 106/306 (34%), Positives = 174/306 (56%), Gaps = 8/306 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL A L ++H + ++ ++T+GD+I + L +IGGKGLF Sbjct: 2 KIRIGTRKSQLALWQANYIADRLREIH---GVEVELVKITTQGDKILDVPLAKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE L+ EID AVHS KD+PT L +GL++ A RED RD F+S + + L + Sbjct: 59 VKEIEDALLKNEIDIAVHSLKDVPTVLPEGLELIAITEREDPRDAFLSIKHEHIYQLPEN 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +VIGTSSLRRK+ +++ R D+ + D RG ++TR+ KL + AI+LAYAG+KRL + Sbjct: 119 AVIGTSSLRRKSQIMKIRKDLQIKDLRGNVDTRIRKLEEGQYDAIILAYAGLKRLGLDGK 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 +K I + ++ P+ QG + IE ++ + + L+K +NH +++ ER+FL L+G C Sbjct: 179 VKYIFSPDEMIPAVCQGFLAIEGRSDDERIKNLIKPLNHYESYLRATAERSFLKTLEGGC 238 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR-----CDAINIGRDAAQYIRFI 299 + + + K ++ G + +G+ +++ AI +G+ A+ + Sbjct: 239 QVPLGAYCEIKENSFIITGFIADLEGREYYQEKITEQIKENTQEQAIILGKTLAEKLLND 298 Query: 300 SNKNVF 305 K + Sbjct: 299 GGKQIL 304 >gi|83590097|ref|YP_430106.1| porphobilinogen deaminase [Moorella thermoacetica ATCC 39073] gi|123766782|sp|Q2RJ26|HEM3_MOOTA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|83573011|gb|ABC19563.1| hydroxymethylbilane synthase [Moorella thermoacetica ATCC 39073] Length = 313 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 116/300 (38%), Positives = 164/300 (54%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++G+R S LA A +L P + ++ L TKGD+I + L IG KGLFT Sbjct: 4 IKVGSRESELARWQARWVIQALEKA--WPGLSCRLVTLKTKGDKILDVALARIGDKGLFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G ID AVHS KDMPT L +GL I A PRED DV +S +L L + + Sbjct: 62 KELELALLDGAIDLAVHSMKDMPTTLPEGLVIGAIGPREDPADVLVSPEGYTLATLPIKA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRRKA L R D+ ++D RG + TRL K+ + AI+LA AG+KRL +V+ Sbjct: 122 RVGTSSLRRKAQLAYARPDLELVDLRGNVPTRLAKMERDGLTAIVLAAAGLKRLNHGQVL 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E + P+ GQGAI +E + + ELV INH T +V ERA+L L+G C+ Sbjct: 182 GEPIPYHICLPAVGQGAIGVEIRAGDRRVAELVAAINHPPTAAAVRAERAYLRALEGGCQ 241 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IA A + + L G+V + DG+ +G+ D GR+ A+ + + Sbjct: 242 VPIAALATVEDTALVLQGMVASLDGREMLRDIASGSTRDPEAAGRELARKLLARGAGEIL 301 >gi|283851270|ref|ZP_06368553.1| porphobilinogen deaminase [Desulfovibrio sp. FW1012B] gi|283573439|gb|EFC21416.1| porphobilinogen deaminase [Desulfovibrio sp. FW1012B] Length = 310 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 162/305 (53%), Gaps = 2/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++ I TR S LAL A + L + + P + ++P+ TKGD+I + L ++GGK Sbjct: 1 MREKLVIATRSSKLALWQANHVSARLRETY--PGLVVDLLPIKTKGDKILDVPLAKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +EIE+ L+ G D AVHS KD+P + +GL + RED D +S L Sbjct: 59 GLFVKEIEEALLDGRADLAVHSMKDVPAEQPQGLVVGIVPEREDPCDTLLSVAYAGFAAL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSSLRRKA L+ R D+S+ID RG ++TR+ KL + AI++A AG+ RL Sbjct: 119 PAGARVGTSSLRRKAQLMALRPDLSIIDLRGNLDTRVGKLLDGLFDAIVVATAGLNRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 L +F P+ QGA+ +E ++P+ ++ +H ++ D+V ER FLA L+ Sbjct: 179 TAPQAVRLGPPEFLPAAAQGALGLEYRTDDPETAAMLAFFDHPESRDAVAAERGFLARLE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ IA A G L G+V + + G R +A +G+ A+ + + Sbjct: 239 GGCQVPIAAHATIDGDALALDGLVADPETGQTFRGNVTGKRSEARALGQGLAESVLAMGA 298 Query: 302 KNVFN 306 K V Sbjct: 299 KAVLE 303 >gi|296314908|ref|ZP_06864849.1| hydroxymethylbilane synthase [Neisseria polysaccharea ATCC 43768] gi|296838093|gb|EFH22031.1| hydroxymethylbilane synthase [Neisseria polysaccharea ATCC 43768] Length = 311 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCKVEILGMTTRGDRILDRTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNRYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L +++ RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPESAVVGTSSLRREAQLRARYPHLAIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ IL+ D P+ GQGA+ IE + E++K +NH T V ERA L Sbjct: 179 LDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILRADAQAPAGYADALGRAVAKKLADDG 298 Query: 301 NKNVF 305 + + Sbjct: 299 ARELI 303 >gi|155967344|gb|ABU41508.1| HemC [Heliophilum fasciatum] Length = 315 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 165/304 (54%), Gaps = 3/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +P IGTR S LAL L + P I + TKGD+I + L +IG KG Sbjct: 5 NRPIVIGTRDSALALWQTHWVLEQLQA--RFPEQRFEIKAIKTKGDKILDVALAKIGDKG 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E ++ GE+D AVHS KD+PT+L +GL + A RED RDV I TA++L +L Sbjct: 63 LFTKELEVAMLEGEVDMAVHSLKDLPTQLPEGLTVGAMCIREDYRDVLIGRTARTLAELK 122 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GT+SLRRK+ + + R D+ ++D RG ++TR+ K+ I+LA AG+ RL Sbjct: 123 PGARVGTASLRRKSQIWKVRPDLELLDIRGNLQTRMRKMEEQDLDGIILAAAGVLRLGWA 182 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + ++ + P+ GQG++ IE + +V +NH+DT D + ERA + L+G Sbjct: 183 DKITQYIDEDVCLPAVGQGSVGIEIRDGDEAIARVVGALNHKDTADCITAERALMRTLEG 242 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ I + +L +G+V + DG+ G+R +A ++G A + Sbjct: 243 GCQVPIGALGKLGEDDSLTLHGVVASLDGREICRDQVTGHRSEAADLGHRLADILIAKGA 302 Query: 302 KNVF 305 + Sbjct: 303 AEIL 306 >gi|294670387|ref|ZP_06735269.1| hypothetical protein NEIELOOT_02105 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307851|gb|EFE49094.1| hypothetical protein NEIELOOT_02105 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 312 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 105/306 (34%), Positives = 169/306 (55%), Gaps = 3/306 (0%) Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I +RTL++IG Sbjct: 1 MNTPKKLVIASRESMLAMWQAEHIKGRLKALY--PDCEVEILGMTTRGDQILDRTLSKIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E+ L G D AVHS KD+P +L +G ++A R D F+S+ L+ Sbjct: 59 GKGLFIKELEQALQDGRADLAVHSIKDVPMELPEGFALAAIGERASPFDAFVSNQYARLE 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 ++ +++GTSSLRR+A L +++ RG ++TRL+KL+N A++LA AG++RL Sbjct: 119 EMPEGAIVGTSSLRREAQLRAKFPHLTIQPLRGNVQTRLSKLDNGDYDAVILAAAGLQRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I+EIL+ D P+ GQGA+ IE ++++ +NHE+T V ERA Sbjct: 179 GLDSRIREILSPADSLPAAGQGALGIEIAARRTDLADILRPLNHEETAACVTAERALARA 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L GSC+ +A + + L G+V DG + E S A +GR A+ + Sbjct: 239 LGGSCQVPLAAYCVMEDGLLTLNGLVGHPDGSVIIEASAQAPDAYANALGRAVAKRLADD 298 Query: 300 SNKNVF 305 + + Sbjct: 299 GAEELI 304 >gi|88770654|gb|ABD51930.1| chloroplast hydroxymethylbilane synthase [Guillardia theta] Length = 346 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 125/310 (40%), Positives = 187/310 (60%), Gaps = 5/310 (1%) Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVH----KIPPHNIVIIPLSTKGDRITNRTL 55 M +P ++GTR SPLALA A+ETR L ++ + I ++T GD ++ L Sbjct: 13 MSGEPVIKLGTRGSPLALAQAYETRRRLAELFPEELGEKGEKVSINIINTSGDMELSKAL 72 Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115 +EIGGKGLFT+E++ L+ E+D VHS KD+PT L G + A LPRED RD FIS Sbjct: 73 SEIGGKGLFTKELDVALLKKEVDFCVHSMKDVPTYLPDGTHLEAMLPREDTRDAFISPKY 132 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 QS +++ +VIG++SLRR+A + I ++FRG ++TRL KL++ A LLA AG Sbjct: 133 QSFEEMPEGTVIGSASLRRQAQIFAKNPKIKCVNFRGNVQTRLRKLDDEVVDATLLALAG 192 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 +KR+ + ++L+ ++ P+ QGAI I+ ++ K + + +NH+DT V+CER+ Sbjct: 193 LKRMNMADCVTKVLDWDEMLPAVAQGAIGIQVRSDDDKTLKYISALNHKDTKTCVDCERS 252 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 FLA LDGSCK+ IAG A ++F G+V + DG R G+ D + IG+DA + Sbjct: 253 FLATLDGSCKTPIAGQARIIDGKIHFRGLVASPDGSKIFRAERVGDVSDYMKIGKDAGEE 312 Query: 296 IRFISNKNVF 305 IR + + F Sbjct: 313 IRKEAGEQFF 322 >gi|294676723|ref|YP_003577338.1| hydroxymethylbilane synthase [Rhodobacter capsulatus SB 1003] gi|12280937|gb|AAG50298.1| porphobilinogen deaminase [Rhodobacter capsulatus] gi|294475543|gb|ADE84931.1| hydroxymethylbilane synthase [Rhodobacter capsulatus SB 1003] Length = 317 Score = 253 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 126/307 (41%), Positives = 179/307 (58%), Gaps = 4/307 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA AFETRS LM +P I+ + T GD ++ L E+GG Sbjct: 10 PLKIGTRGSPLALAQAFETRSRLMAAFDLPEEAFEIVVIKTSGDNAALIAADKPLKEVGG 69 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ +++G ID AVHS KDMPT +GL + YLPRED RD F+S SL + Sbjct: 70 KGLFTKEIEEAMLAGSIDIAVHSMKDMPTLQPEGLILDCYLPREDTRDAFVSMKYNSLAE 129 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A L R D+ +++FRG ++TR+ KL A A LA AG+ RL Sbjct: 130 LPEGAVVGTSSLRRRAQLAARRPDLKMVEFRGNVQTRMKKLGEGVADATFLALAGLNRLG 189 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +V K + ED P+ QG I IE + +A+ L+ I+H + + CER+FL L Sbjct: 190 MSEVAKSAIEPEDMLPAVAQGCIGIERREADTRAKMLLDAIHHAPSGLRLACERSFLLTL 249 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ I G + +G ++ G +L DG G D + +G + A+ + + Sbjct: 250 DGSCETPIGGLSVLEGDQIWLRGEILRPDGSETITGEIRGPAADGVALGAELAKQLLAKA 309 Query: 301 NKNVFNF 307 + F + Sbjct: 310 PADFFCW 316 >gi|155241760|gb|ABT18042.1| porphobilinogen deaminase [Heliobacillus mobilis] Length = 314 Score = 253 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 107/308 (34%), Positives = 163/308 (52%), Gaps = 5/308 (1%) Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M ++P IGTR S LAL + L ++ P + + TKGD+I + L +I Sbjct: 1 MSVLQRPVVIGTRDSALALWQTNWVMARLKEL--FPEQAFEVKAIKTKGDKILDVALAKI 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G KGLFT+E+E ++ GEID AVHS KD+PT L +GL I A RED RD+ IS L Sbjct: 59 GDKGLFTKELEVSMLEGEIDMAVHSLKDLPTVLPEGLTIGAMCVREDCRDILISR-HGGL 117 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L + +GT+SLRRKA + + R D+ ++D RG ++TRL K+ ++LA AG+ R Sbjct: 118 DALPQGARVGTASLRRKAQIWQVRPDLELLDIRGNLQTRLRKMEEQNLDGLILAAAGVIR 177 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + I + + ++ P+ GQG+I IE + + ++V +NH +T S+ ERA + Sbjct: 178 LGWAEKISQYIPVDMCLPAVGQGSIGIEIREGDDEIAKIVGALNHYETSVSIRAERALMR 237 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+G C+ I + L GIV + DGK G+ +G A+ + Sbjct: 238 TLEGGCQVPIGSLGRLQEGRLVLDGIVASLDGKHVARGREEGDPSQPEEVGIRLAEQLLQ 297 Query: 299 ISNKNVFN 306 + + N Sbjct: 298 QGAREILN 305 >gi|116072875|ref|ZP_01470140.1| porphobilinogen deaminase [Synechococcus sp. BL107] gi|116064401|gb|EAU70162.1| porphobilinogen deaminase [Synechococcus sp. BL107] Length = 317 Score = 253 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 103/308 (33%), Positives = 154/308 (50%), Gaps = 5/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ ++ L H P I + ++T+GD+I + L +IG Sbjct: 1 MALTELRIASRRSQLAMVQTNWVKAELEKAH--PGLTITVEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + H + Sbjct: 59 KGLFTKELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVLHAKNKHLN 118 Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L +V+GTSSLRR A L + D RG + TRL KL++ ++LA AG+ Sbjct: 119 LATLPEGAVVGTSSLRRLAQLRHHYPHLEFKDVRGNVITRLEKLDSGAYDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I + + + + GQGA+ IE N P+ +++KV+ H T ERAFL Sbjct: 179 RLGFADRIDQSIPGDISLHAVGQGALGIECVENKPEVMDIIKVLEHGPTSQRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I +G L G+V + DGK +G D +IG A ++ Sbjct: 239 RELEGGCQVPIGVNTRFEGDQLILTGMVASLDGKRLIREKASGPSTDPESIGLALATTLK 298 Query: 298 FISNKNVF 305 + + Sbjct: 299 GLGAGEIL 306 >gi|295399407|ref|ZP_06809389.1| porphobilinogen deaminase [Geobacillus thermoglucosidasius C56-YS93] gi|312110034|ref|YP_003988350.1| porphobilinogen deaminase [Geobacillus sp. Y4.1MC1] gi|294978873|gb|EFG54469.1| porphobilinogen deaminase [Geobacillus thermoglucosidasius C56-YS93] gi|311215135|gb|ADP73739.1| porphobilinogen deaminase [Geobacillus sp. Y4.1MC1] Length = 310 Score = 253 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 116/306 (37%), Positives = 172/306 (56%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P + + TKGD+I + TL+++GGKG Sbjct: 1 MRKIIVGSRRSKLALTQTNWVIEQLRQLGA--PFEFEVKEIVTKGDKILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE +++ EID AVHS KDMP L GL I PRED RDV IS ++ DL Sbjct: 59 LFVKEIEHAMLNNEIDMAVHSMKDMPAVLPDGLIIGCVPPREDHRDVLISKNKETFADLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+ Sbjct: 119 SGAVVGTSSLRRSAQLLAKRPDLTIKWIRGNIDTRLAKLQTEDYDAIVLAAAGLVRMGWA 178 Query: 183 -KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 VI E L + P+ GQGA+ +E ++ + +E ++ +N DT +V ERAFL +L+ Sbjct: 179 SDVITEYLATDVCLPAVGQGALAVECRESDEELREWLQKLNDIDTERAVYAERAFLRQLE 238 Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A+ + + +V + DGK ++ + +G+ D N+G AA + Sbjct: 239 GGCQVPIAGYAHVNNQNDIVLTALVASPDGKELYKETVSGS--DPENVGTTAADLLIKRG 296 Query: 301 NKNVFN 306 K + + Sbjct: 297 AKALID 302 >gi|288553611|ref|YP_003425546.1| porphobilinogen deaminase [Bacillus pseudofirmus OF4] gi|288544771|gb|ADC48654.1| porphobilinogen deaminase [Bacillus pseudofirmus OF4] Length = 310 Score = 253 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 116/306 (37%), Positives = 174/306 (56%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + IG+R S LAL + L K P+N + + TKGDRI + TL+++GGKG Sbjct: 1 MRTIVIGSRRSNLALTQTDWVINQLKK--KEVPYNFEVKKIVTKGDRILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L + EID AVHS KD+P+ + +G ++A RED RD FIS LKDL Sbjct: 59 LFVKEIEQALENKEIDIAVHSMKDVPSVMPEGFSLAAITEREDARDAFISLDHVKLKDLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 +++GTSSLRR A LL R D+ V RG +ETRL KL AI+LA AG+ RL Sbjct: 119 SGAIVGTSSLRRSAQLLAERPDLEVKWIRGNVETRLRKLKEEDFSAIILAAAGLNRLGYS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+++ E L E P+ GQGA+ +E ++ + EL++ +N E T +V ER FL +++ Sbjct: 179 EELVTEYLEPEMCVPAVGQGALGLECRSDDQEVIELIQKLNDEATALTVTAERTFLHKME 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DGK + + G D + +G + ++ + Sbjct: 239 GGCQVPIAGYATMQEDGQVSLTALVGSPDGKTILKDTVVG--QDPVKVGEEVSERLLEKG 296 Query: 301 NKNVFN 306 K + + Sbjct: 297 AKEILD 302 >gi|59800604|ref|YP_207316.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA 1090] gi|240013461|ref|ZP_04720374.1| porphobilinogen deaminase [Neisseria gonorrhoeae DGI18] gi|240117279|ref|ZP_04731341.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID1] gi|240120532|ref|ZP_04733494.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID24-1] gi|254493056|ref|ZP_05106227.1| porphobilinogen deaminase [Neisseria gonorrhoeae 1291] gi|260441191|ref|ZP_05795007.1| porphobilinogen deaminase [Neisseria gonorrhoeae DGI2] gi|268602974|ref|ZP_06137141.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID1] gi|59717499|gb|AAW88904.1| putative porphobilinogen deaminase [Neisseria gonorrhoeae FA 1090] gi|226512096|gb|EEH61441.1| porphobilinogen deaminase [Neisseria gonorrhoeae 1291] gi|268587105|gb|EEZ51781.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID1] Length = 311 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG I + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKLADDG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AQELI 303 >gi|119503707|ref|ZP_01625789.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2080] gi|119460215|gb|EAW41308.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2080] Length = 302 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 107/306 (34%), Positives = 161/306 (52%), Gaps = 8/306 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I TR SPLAL A L ++ P + ++ ++++GD++ ++ L ++GG Sbjct: 1 MSK--LVIATRESPLALWQANYVADRLRALY--PELMVELLGMTSRGDQLLDKPLYKVGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P L GL + RED RD + +L + Sbjct: 57 KGLFVKELETALLDGRADIAVHSMKDVPMALPPGLTLGVICEREDPRDALV--GISALSE 114 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + GTSSLRR + R R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 115 LEQGARFGTSSLRRACQIRRVRPDLEIGFLRGNVNTRLAKLDAGEFDAIILATAGLVRLG 174 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I + E P+ GQGA+ IE ++ + EL+ +N DT + V ERA + L Sbjct: 175 FESRIGARIEPEVSLPAGGQGAVGIEYRSDDDRVAELLAPLNDADTAECVTAERAVVRVL 234 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DG C IA +A +G+ L+ +V + DG+ E G +A +G++ AQ + Sbjct: 235 DGGCDVPIASYAVKEGNELWLRALVGSVDGRSVLEAQSRG--ANAEELGQEVAQALLDGG 292 Query: 301 NKNVFN 306 V Sbjct: 293 AAAVLE 298 >gi|168059289|ref|XP_001781636.1| predicted protein [Physcomitrella patens subsp. patens] gi|162666950|gb|EDQ53592.1| predicted protein [Physcomitrella patens subsp. patens] Length = 393 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 134/306 (43%), Positives = 187/306 (61%), Gaps = 4/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A++TR L H + I+ + T GD+I ++ L +IGGKGL Sbjct: 88 VRIGTRGSPLALAQAYQTRDKLKAAHPELAEEGALEIVIIKTTGDKILSQPLADIGGKGL 147 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L++G+ID AVHS KD+PT L +G + LPRED+RD FI SL +L Sbjct: 148 FTKEIDDALLNGDIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICPNYSSLAELPE 207 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+G++SLRR++ LL + V++FRG ++TRL KL+ A LLA AG+KRL + Sbjct: 208 GSVVGSASLRRQSQLLHKYPHLKVVNFRGNVQTRLRKLSEGTVQATLLALAGLKRLDMTE 267 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + IL+ +D P+ QGAI I + K +E + +NHEDT +V CERAFLA+LDGS Sbjct: 268 HVTTILDTDDMLPAIAQGAIGIACRTGDTKMEEYLSSLNHEDTRLAVACERAFLAKLDGS 327 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFISN 301 C++ IAG A F G+V +DGK E SR G+ D I + +DA Q + + Sbjct: 328 CRTPIAGLAQRTDDGCSFRGLVATTDGKQVLETSRKGSFFYDDMIALAQDAGQELISRAG 387 Query: 302 KNVFNF 307 + F + Sbjct: 388 PDFFEW 393 >gi|298527685|ref|ZP_07015089.1| porphobilinogen deaminase [Desulfonatronospira thiodismutans ASO3-1] gi|298511337|gb|EFI35239.1| porphobilinogen deaminase [Desulfonatronospira thiodismutans ASO3-1] Length = 313 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 106/303 (34%), Positives = 161/303 (53%), Gaps = 2/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR S LAL A S L + + + ++ + T GD+I + L ++GGKG Sbjct: 1 MKKVVIATRGSKLALWQAEHISSRLRERYS--GLEVELLKVKTTGDKILDVPLAKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L+ G D AVHS KDMP +L +GL++ RE DV +S + + L Sbjct: 59 LFVKEIEEALMDGRADIAVHSMKDMPAELPRGLKLGIIPERESRFDVLLSTSYPDISSLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR+A +L R D+ + RG ++TRL KL AI++A AG+ RL Sbjct: 119 TGATVGTSSLRRQAQILHMRPDLEIQMLRGNLDTRLRKLKEGIYDAIIVAAAGMSRLNMH 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 L+ F P+ GQGA+ IE + + EL+ ++ T + CERAFLAEL+G Sbjct: 179 ADYVTELSPPYFLPAVGQGALGIEYLQDRQELDELLGFMDDFSTRYCIECERAFLAELEG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IA + +G+ + G+V G+ S +G DA ++G D A+ + + Sbjct: 239 GCQVPIACYCRHEGNNIQATGLVCDLKGERMIRKSVSGKPKDARSLGVDMARQVLEAGGR 298 Query: 303 NVF 305 + Sbjct: 299 EIL 301 >gi|254781037|ref|YP_003065450.1| porphobilinogen deaminase [Candidatus Liberibacter asiaticus str. psy62] gi|254040714|gb|ACT57510.1| porphobilinogen deaminase [Candidatus Liberibacter asiaticus str. psy62] Length = 307 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 307/307 (100%), Positives = 307/307 (100%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG Sbjct: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD Sbjct: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK Sbjct: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL Sbjct: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS Sbjct: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 Query: 301 NKNVFNF 307 NKNVFNF Sbjct: 301 NKNVFNF 307 >gi|194097777|ref|YP_002000818.1| porphobilinogen deaminase [Neisseria gonorrhoeae NCCP11945] gi|239998278|ref|ZP_04718202.1| porphobilinogen deaminase [Neisseria gonorrhoeae 35/02] gi|240015900|ref|ZP_04722440.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA6140] gi|240080040|ref|ZP_04724583.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA19] gi|240114994|ref|ZP_04729056.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID18] gi|240122831|ref|ZP_04735787.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID332] gi|240125027|ref|ZP_04737913.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-92-679] gi|240127540|ref|ZP_04740201.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-93-1035] gi|268600662|ref|ZP_06134829.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID18] gi|268681446|ref|ZP_06148308.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID332] gi|268683614|ref|ZP_06150476.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-92-679] gi|268685917|ref|ZP_06152779.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-93-1035] gi|193933067|gb|ACF28891.1| porphobilinogen deaminase [Neisseria gonorrhoeae NCCP11945] gi|268584793|gb|EEZ49469.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID18] gi|268621730|gb|EEZ54130.1| porphobilinogen deaminase [Neisseria gonorrhoeae PID332] gi|268623898|gb|EEZ56298.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-92-679] gi|268626201|gb|EEZ58601.1| porphobilinogen deaminase [Neisseria gonorrhoeae SK-93-1035] gi|317163558|gb|ADV07099.1| porphobilinogen deaminase [Neisseria gonorrhoeae TCDC-NG08107] Length = 311 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 179 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG I + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKLADDG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AQELI 303 >gi|197121772|ref|YP_002133723.1| porphobilinogen deaminase [Anaeromyxobacter sp. K] gi|220916566|ref|YP_002491870.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-1] gi|196171621|gb|ACG72594.1| porphobilinogen deaminase [Anaeromyxobacter sp. K] gi|219954420|gb|ACL64804.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-1] Length = 314 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 101/300 (33%), Positives = 149/300 (49%), Gaps = 3/300 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLA A L D + P + + L T+GD+I L ++GGKGLF Sbjct: 2 IRIATRRSPLAKWQANHVSQLLRD--REPGLEVRLHELVTRGDKILEVPLADVGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ + + AVHS KD+P L GL ++A RED RD S ++L L + Sbjct: 60 KEIEDALLNRDAEVAVHSMKDLPAVLAPGLVLAAVPQREDPRDALCSPRWKTLAALPKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR A L R D+ + RG +ETRL K + A++LAYAG++RL + Sbjct: 120 RVGTSSLRRSAQLKALRPDLQMEMVRGNVETRLRKASEGL-DAVVLAYAGLRRLGLAEHA 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + E+ P+ QGA+ +E ++ + + DT + ER FLA ++G C+ Sbjct: 179 TYVFPPEEMLPAVAQGALALEARADDAPTLARLAALEDPDTRVRIEAERGFLARIEGGCQ 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IAG A G + +V + DG R G +A +G A + + Sbjct: 239 VPIAGHATLAGGKVTIRALVASLDGARVIRGERTGAYAEARAMGESLADELLSRGADQIL 298 >gi|115444475|ref|NP_001046017.1| Os02g0168800 [Oryza sativa Japonica Group] gi|75259105|sp|Q6H6D2|HEM3_ORYSJ RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase; Flags: Precursor gi|49388602|dbj|BAD25717.1| putative porphobilinogen deaminase [Oryza sativa Japonica Group] gi|113535548|dbj|BAF07931.1| Os02g0168800 [Oryza sativa Japonica Group] gi|222622259|gb|EEE56391.1| hypothetical protein OsJ_05540 [Oryza sativa Japonica Group] Length = 358 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 126/306 (41%), Positives = 180/306 (58%), Gaps = 5/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR L H + I+ + T GD I ++ L +IGGKGL Sbjct: 50 IRIGTRGSPLALAQAHETRDKLKAAHSELAEEGAVEIVIIKTTGDMILDKPLADIGGKGL 109 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L Sbjct: 110 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTASSLAELPA 169 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+G++SLRR++ +L + V++FRG ++TRL KL HA LLA AG+KRL + Sbjct: 170 GSVVGSASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLNMAE 229 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +L++++ P+ QGAI I ++ + +NHEDT +V CER FL+ LDG+ Sbjct: 230 TATSVLSVDEMLPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLAVACEREFLSVLDGN 289 Query: 244 CKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD--AINIGRDAAQYIRFIS 300 C++ IA +A K F G++ + DG +E SR G + +G+DA ++ + Sbjct: 290 CRTPIAAYASRDKDGNCSFRGLLASPDGSTVYETSRTGPYDFDIMVEMGKDAGHELKAKA 349 Query: 301 NKNVFN 306 F+ Sbjct: 350 GPGFFD 355 >gi|313623622|gb|EFR93785.1| porphobilinogen deaminase [Listeria innocua FSL J1-023] Length = 309 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 117/307 (38%), Positives = 165/307 (53%), Gaps = 7/307 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ +G+R S LAL + L + + P + I + TKGDRI + TL+++GGK Sbjct: 1 MKRKIIVGSRRSKLALTQSNWVIKKLKENY--PEIDFEIKEIVTKGDRILDVTLSKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF E+E+ L ID AVHS KD+P+ L GL I A RE D F+ + +L DL Sbjct: 59 GLFVSEVEQALSDEVIDFAVHSMKDVPSSLKDGLVIGAIPKRESPLDCFVFNEVSTLDDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +VIGTSSLRR A LL+ R D V RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 119 PKGAVIGTSSLRRAAQLLKHRPDFVVKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGW 178 Query: 182 EKVIK---EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E ++ E P+ GQGA+ IE + + ++ I+HE+T V ER FL Sbjct: 179 LENPSLKLEDISPELCLPAVGQGALAIECRETDLQICNMLASIHHEETGICVEAERVFLK 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +L+G C+ IAGFA G +++F G+V +DG I E R G IG A+ + Sbjct: 239 KLNGGCEIPIAGFATKTGDSVHFKGLVGNADGSIILESERTG--ASPAEIGNQVAEELLS 296 Query: 299 ISNKNVF 305 + Sbjct: 297 EGADTII 303 >gi|291044525|ref|ZP_06570234.1| porphobilinogen deaminase [Neisseria gonorrhoeae DGI2] gi|293397661|ref|ZP_06641867.1| porphobilinogen deaminase [Neisseria gonorrhoeae F62] gi|291011419|gb|EFE03415.1| porphobilinogen deaminase [Neisseria gonorrhoeae DGI2] gi|291611607|gb|EFF40676.1| porphobilinogen deaminase [Neisseria gonorrhoeae F62] Length = 313 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 3 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 61 KGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 121 MPEGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 181 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG I + A +GR A+ + Sbjct: 241 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKLADDG 300 Query: 301 NKNVF 305 + + Sbjct: 301 AQELI 305 >gi|284929513|ref|YP_003422035.1| hydroxymethylbilane synthase [cyanobacterium UCYN-A] gi|284809957|gb|ADB95654.1| hydroxymethylbilane synthase [cyanobacterium UCYN-A] Length = 318 Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 104/308 (33%), Positives = 159/308 (51%), Gaps = 5/308 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RIG+R S LAL + + L + P + I +ST+GD I + L +IG K Sbjct: 4 SNRLIRIGSRKSQLALVQTYWIQEQLQKHY--PNYEFQIETMSTQGDNILDVALAKIGDK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT+E+E ++ ID AVHS KD+PT L +GL + RE+ D + + L Sbjct: 62 GLFTKELEVAMLQNRIDFAVHSLKDLPTNLPEGLMLGCITERENPADALVVNEKYKNNKL 121 Query: 122 ---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 S+IGTSSLRR A L + D RG + TRL KL+ + AI+LA AG+KR Sbjct: 122 DTLPEGSIIGTSSLRRLAQLRHHYPYLIFKDVRGNVNTRLAKLDAGEYDAIILAAAGLKR 181 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + I +I+ + + GQGA+ IE + + EL++V+ H +T ER+FL Sbjct: 182 LNMDNRIHQIIPEDISLHAVGQGALGIECRAADSRILELLEVLKHSETHYRCMGERSFLR 241 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+G C+ I + + L GIV + DGK + + +G+ A N+G + + +R Sbjct: 242 ALEGGCQVPIGVTTKIECNILTLTGIVASLDGKTMLKNTVSGHMEQAENLGYELSVCLRD 301 Query: 299 ISNKNVFN 306 + + Sbjct: 302 AGATEILD 309 >gi|260893122|ref|YP_003239219.1| porphobilinogen deaminase [Ammonifex degensii KC4] gi|260865263|gb|ACX52369.1| porphobilinogen deaminase [Ammonifex degensii KC4] Length = 308 Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 165/305 (54%), Gaps = 3/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ RIGTR S LALA + L + + P + I+ + T GD++ N L IGGK Sbjct: 4 SKRCLRIGTRGSDLALAQTEQVLQILRE--RWPHYTYEIVKIKTTGDKVRNLALPRIGGK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT+E+E L+ +ID AVHS KD+PT+L + L + A LPRE DV IS T L+DL Sbjct: 62 GLFTKELEVALLEEKIDLAVHSLKDLPTELPEELCVGAVLPREHPGDVLISLTGAGLEDL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSSLRR+A L R D++ + RG + TRL KL + A++LA+AG++RL+ Sbjct: 122 PEGARIGTSSLRRQAQLKAARPDLNFVPLRGNVPTRLRKLEKGECEAVVLAWAGLRRLRL 181 Query: 182 EKVIKEILNIEDFP-PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + L P+ QGAI +E + + +++V+V++ T V ERAFL L Sbjct: 182 DLTGRMTLLPYQVCLPAVAQGAIGVEMRKEDRELRKMVEVLDDPTTRLEVTAERAFLRWL 241 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C IA A G+ + G+V +GK +G+ +G A+ + Sbjct: 242 GGGCHVPIAALARVAGAEILLEGLVADPEGKRIVRGQESGSTAYPEEVGIRLAERLLREG 301 Query: 301 NKNVF 305 + + Sbjct: 302 AEELL 306 >gi|297183175|gb|ADI19316.1| porphobilinogen deaminase [uncultured delta proteobacterium HF0500_03A04] Length = 315 Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 108/302 (35%), Positives = 157/302 (51%), Gaps = 4/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LAL A +S + H P + ++ + TKGDRI +R L+++GGKGLF Sbjct: 5 LRIATRGSRLALWQANWVKSQIEQNH--PGQTVELVIVQTKGDRIQDRPLSQVGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L D AVHS KD+ ++ +GL + RED RD ++ S +L + Sbjct: 63 KELEGSLFREAADLAVHSLKDVTGEVPEGLALPVVTAREDFRDALVAPRHGSFCELPSGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR A LL R D+ RG +ETRLNK+++ A LLA AG+KRL+ E I Sbjct: 123 VVGTSSLRRAAQLLHLRPDLETQPIRGNVETRLNKVDSGAFDATLLAVAGLKRLELELRI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+ E P+ GQG + +E ++P EL++ + + T ER L L+G+C+ Sbjct: 183 TEVFPPEMLLPALGQGVLGLEIRADDPATLELIQPLQDKTTALCCQAERRLLERLEGNCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN--GNRCDAINIGRDAAQYIRFISNKN 303 +AG G L G +LA DG+ E A +G + A I + Sbjct: 243 VPLAGLCERCGERLLLRGQLLAPDGQQVVEHKAESAATPEAARALGDEVANAILNSGGRE 302 Query: 304 VF 305 + Sbjct: 303 IL 304 >gi|307103191|gb|EFN51453.1| hypothetical protein CHLNCDRAFT_33052 [Chlorella variabilis] Length = 361 Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 131/311 (42%), Positives = 189/311 (60%), Gaps = 6/311 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGG 60 K +IGTR SPLALA A+ TR L + II + T GD+I N+ L++IGG Sbjct: 51 TKTLKIGTRGSPLALAQAYLTRDLLKSTFPELNEEGALEIIIIKTTGDKILNQPLSDIGG 110 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EI+ L+ G ID AVHS KD+PT L G + LPRED+RDVFIS +S+ + Sbjct: 111 KGLFTKEIDDALLDGRIDIAVHSMKDVPTYLPAGTVLPCNLPREDVRDVFISAKYKSIAE 170 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+G++SLRR+A +L + V++FRG ++TRL KL A LLA AG+KRL Sbjct: 171 LPEGAVVGSASLRRQAQILAKYPTLQVVNFRGNVQTRLRKLQEGACDATLLALAGLKRLG 230 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 IL+ ++ P+ QGAI I + ++ + +NHE+T ++ CERAFLA L Sbjct: 231 LADKATSILSTDEMLPAVAQGAIGIACREGDDRSAAALAALNHEETRLAIVCERAFLAAL 290 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRF 298 DGSC++ IAG+A+ L F G+V DGK +E +R G+ +A IG+DA ++ Sbjct: 291 DGSCRTPIAGWAHKADGQLAFRGLVSTPDGKKMYETTRTGSLTEDEARAIGQDAGTELKQ 350 Query: 299 ISNKN--VFNF 307 + ++ VF++ Sbjct: 351 QAQQDGTVFDW 361 >gi|113868875|ref|YP_727364.1| porphobilinogen deaminase [Ralstonia eutropha H16] gi|113527651|emb|CAJ93996.1| porphobilinogen deaminase [Ralstonia eutropha H16] Length = 337 Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 170/305 (55%), Gaps = 5/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + I +R S LAL A R++L + P ++ I+ ++T+GD+I +RTL+++GGKGL Sbjct: 19 QKLVIASRESRLALWQAEHVRAALQQYY--PACDVSILGMTTRGDQILDRTLSKVGGKGL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E + G D AVHS KD+P +L +G ++A + RED RD +S SL ++ Sbjct: 77 FVKELEFAMDEGRADLAVHSLKDVPMELPEGFALTAVMEREDPRDALVSSAYASLDEMPA 136 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR+A L + + RG ++TRL KL+ + AI+LA AG+KRL + Sbjct: 137 GTVVGTSSLRREAALRSRYPQLVIKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGE 196 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ ++ I+ P+ GQGA+ IE N P+ + + +NH+ T +V+ ERA L GS Sbjct: 197 RIRALIPIDVSLPAAGQGALGIEILANRPELAQWLAPLNHQPTALAVSAERAVSRMLGGS 256 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIRFIS 300 C+ +A A +G L V DG + +G D A +G+ A+ + Sbjct: 257 CQVPLAAHARWEGDQLKLDAFVALPDGTRAIRAAASGPAVDLAAAEALGQACARDLLAQG 316 Query: 301 NKNVF 305 + + Sbjct: 317 AEAIL 321 >gi|33239945|ref|NP_874887.1| porphobilinogen deaminase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|39931408|sp|Q7VD89|HEM3_PROMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|33237471|gb|AAP99539.1| Porphobilinogen deaminase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 315 Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 101/309 (32%), Positives = 157/309 (50%), Gaps = 5/309 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ + L P +I I ++T+GD+I + L +IG Sbjct: 1 MALDQVRIASRRSQLAMVQTNWVKEELEKA--CPSIDISIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK- 119 KGLFT+E+E +++ G D AVHS KD+PT L +GL + RED D + + Sbjct: 59 KGLFTKELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCITKREDPADALVVNKKYKNYQ 118 Query: 120 --DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 DL SV+GTSSLRR A L + D RG + TRL KL++ + ++LA AG+ Sbjct: 119 LNDLPEGSVVGTSSLRRLAQLRHHYPGLIFKDVRGNVITRLEKLDSGEYDCLILAAAGLT 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I +++ E + GQGA+ IE + + +++KV+ H+++ ERAFL Sbjct: 179 RLGFGNRIHQLIPSEISLHAVGQGALGIECVKDKEEILQIIKVLEHKESSLRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL+G C+ I + +G L G+V + DGK ++ G+ IG + A ++ Sbjct: 239 KELEGGCQVPIGVNSKIQGQELILTGMVASLDGKQLIRDTKTGSSMHPETIGIELANTLK 298 Query: 298 FISNKNVFN 306 + Sbjct: 299 SQGAMEILE 307 >gi|268594132|ref|ZP_06128299.1| porphobilinogen deaminase [Neisseria gonorrhoeae 35/02] gi|268596184|ref|ZP_06130351.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA19] gi|268547521|gb|EEZ42939.1| porphobilinogen deaminase [Neisseria gonorrhoeae 35/02] gi|268549972|gb|EEZ44991.1| porphobilinogen deaminase [Neisseria gonorrhoeae FA19] Length = 313 Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GDRI +RTL+++GG Sbjct: 3 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDRILDRTLSKVGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 61 KGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERANPFDAFVSNRYARLEE 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 121 MPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + E++K +NH+ T V ERA L Sbjct: 181 LDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKPLNHDTTHACVTAERALARAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG I + A +GR A+ + Sbjct: 241 GGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADAQAPAGYADALGRAVAKKLADDG 300 Query: 301 NKNVF 305 + + Sbjct: 301 AQELI 305 >gi|218190145|gb|EEC72572.1| hypothetical protein OsI_06012 [Oryza sativa Indica Group] Length = 358 Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 126/306 (41%), Positives = 181/306 (59%), Gaps = 5/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR L H + I+ + T GD I ++ L +IGGKGL Sbjct: 50 IRIGTRGSPLALAQAHETRDKLKAAHSELAEEGAVEIVIIKTTGDMILDKPLADIGGKGL 109 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L Sbjct: 110 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTASSLAELPA 169 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+G++SLRR++ +L + V++FRG ++TRL KL HA LLA AG+KRL + Sbjct: 170 GSVVGSASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLNMAE 229 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +L++++ P+ QGAI I ++ + +NHEDT +V CER FL+ LDG+ Sbjct: 230 TATSVLSVDEMLPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLAVACEREFLSVLDGN 289 Query: 244 CKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD--AINIGRDAAQYIRFIS 300 C++ IA +A K F G++ + DG +E SR G+ + +G+DA ++ + Sbjct: 290 CRTPIAAYASRDKDGNCSFRGLLASPDGSTVYETSRTGSYDFDIMVEMGKDAGHELKAKA 349 Query: 301 NKNVFN 306 F+ Sbjct: 350 GPGFFD 355 >gi|88797646|ref|ZP_01113235.1| porphobilinogen deaminase [Reinekea sp. MED297] gi|88779818|gb|EAR11004.1| porphobilinogen deaminase [Reinekea sp. MED297] Length = 313 Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 110/313 (35%), Positives = 171/313 (54%), Gaps = 11/313 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLAL A ++ L H P + ++ +STKGD+I + L+++GG Sbjct: 1 MSQ-IVRIATRKSPLALWQAEFVKAELEKHH--PDLQVELVKISTKGDQILDVALSKVGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E + +GE D AVHS KD+P ++ G +++ RE+ D F+S+ S+ D Sbjct: 58 KGLFIKELEVAMEAGEADMAVHSMKDVPMEMPAGFELATICERENPFDAFVSNDFDSIDD 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A +L R D+ V RG + TRL KL++ + AI+LA AG+ RL Sbjct: 118 LPQGAVLGTSSLRRQAQILAHRPDLDVRFLRGNVGTRLGKLDDGEYQAIVLACAGLIRLD 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I++ + P+ GQGA+ IE + +E ++ ++HE+T V+ ERA L Sbjct: 178 LQARIRQEIPGNLSLPAVGQGAVGIEIRAGDIALKERLQPLSHENTTLRVSAERAMNRVL 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR----NGN----RCDAINIGRDA 292 +G C+ IAG+A L G V A DG + S G A ++G Sbjct: 238 NGGCEVPIAGYAVLDDQVLKLEGRVGAVDGSKLLKSSAEMTLTGPVSQQISQATDLGHMV 297 Query: 293 AQYIRFISNKNVF 305 A+ + + + Sbjct: 298 ARDLLSQGAQALL 310 >gi|56964395|ref|YP_176126.1| porphobilinogen deaminase [Bacillus clausii KSM-K16] gi|61213279|sp|Q5WEP5|HEM3_BACSK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|56910638|dbj|BAD65165.1| porphobilinogen deaminase [Bacillus clausii KSM-K16] Length = 311 Score = 252 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 118/306 (38%), Positives = 175/306 (57%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + IGTR S LAL L + P+ + + TKGDRI + TL+++GGKG Sbjct: 1 MRKIVIGTRRSKLALTQTNWVIDQLKQLGV--PYEFEVKEIVTKGDRILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L SGEID AVHS KD+P++LL+ ++A RED RDV +S +L +L Sbjct: 59 LFVKEIEAALRSGEIDVAVHSMKDVPSELLEEFTLAAITEREDPRDVLVSENGHTLDELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 +++GTSSLRR A +L R D+ V RG +ETRL KL AI+LA AG+KRL Sbjct: 119 AGAIVGTSSLRRSAQILHRRPDVQVKWIRGNVETRLRKLKEEDFSAIVLAAAGLKRLGYG 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E VI E L+ + P+ GQGA+ +E V++ + EL+ ++HE+T +V ERAFL E++ Sbjct: 179 EDVITEYLDKDVCLPAIGQGALGLECRVDDVETTELLAKLHHEETGKAVLAERAFLKEMN 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ I G+A + ++ G+V + DGK + + G D +G++ + + Sbjct: 239 GGCQVPIGGYATVLEDGAVFLTGLVGSPDGKTILKEGKCGMVAD--ELGKEVSSLLTAQG 296 Query: 301 NKNVFN 306 + Sbjct: 297 AGAILE 302 >gi|15617181|ref|NP_240394.1| porphobilinogen deaminase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681931|ref|YP_002468317.1| porphobilinogen deaminase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682486|ref|YP_002468870.1| porphobilinogen deaminase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471641|ref|ZP_05635640.1| porphobilinogen deaminase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11386824|sp|P57651|HEM3_BUCAI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800236|sp|B8D8F3|HEM3_BUCA5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800237|sp|B8D8B0|HEM3_BUCAT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|25292183|pir||H84998 hydroxymethylbilane synthase (EC 4.3.1.8) [imported] - Buchnera sp. (strain APS) gi|10039246|dbj|BAB13280.1| porphobilinogen deaminase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219622219|gb|ACL30375.1| porphobilinogen deaminase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624774|gb|ACL30929.1| porphobilinogen deaminase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086313|gb|ADP66395.1| porphobilinogen deaminase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086887|gb|ADP66968.1| porphobilinogen deaminase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087477|gb|ADP67557.1| porphobilinogen deaminase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087959|gb|ADP68038.1| porphobilinogen deaminase [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 314 Score = 252 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 175/306 (57%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL + ++ ++ P NI ++P+ T GD I N++L++IGG Sbjct: 1 MYNKTLRIATRKSPLALKQTKYVQKKILSLY--PDLNIKLVPIVTHGDNILNKSLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ + D A+HS KD+P K+ K L + + R + D +S+ QS+ Sbjct: 59 KGLFIKELELALLENKADIAIHSMKDLPVKITKELCLVSICKRGNALDSLVSNNYQSINQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+ L+ +R D+ + RG IETR+ KL+ K AI+LA G+ RL+ Sbjct: 119 LPKGAIVGTSSLRRQCQLITYRPDLIISPLRGNIETRIAKLDQGKYDAIILATEGLNRLR 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I +I+ E PS GQGAI I++ +++ K + +NH +T+ +N ERAF +L Sbjct: 179 LKNRITQIIPAELSLPSCGQGAIGIQSRLHDKKVLFFLSRLNHINTFIEINAERAFCRKL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 + C+ I +A K + ++ G+V + +GKI + R G +G A + Sbjct: 239 ESGCQIPIGSYAILKKNKIWLRGLVGSPNGKIILKGERIGCYNTGEKMGYSLADELLKNG 298 Query: 301 NKNVFN 306 KN+ N Sbjct: 299 AKNILN 304 >gi|116793769|gb|ABK26871.1| unknown [Picea sitchensis] Length = 373 Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats. Identities = 135/307 (43%), Positives = 190/307 (61%), Gaps = 5/307 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A+ETR L H + II + T GD+I N+ L +IGGKGL Sbjct: 67 VRIGTRGSPLALAQAYETRDKLKSAHPELAEEGAVEIIIIKTTGDKILNQPLADIGGKGL 126 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G+ID AVHS KD+PT L G + LPRED+RDVFI TA SL +L Sbjct: 127 FTKEIDDALLGGKIDIAVHSMKDVPTYLPSGTILPCNLPREDVRDVFICPTAGSLAELQA 186 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S++G++SLRR++ +L + VI+FRG ++TRL KL + HA LLA+AG+KRL + Sbjct: 187 GSIVGSASLRRQSQILYRYPSLKVINFRGNVQTRLRKLKEGEVHATLLAFAGLKRLGMIQ 246 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + +L+ E+ P+ QGAI I N+ K + + +NHE+T +V CERAFL LDGS Sbjct: 247 HVTCLLSTEEMLPAIAQGAIGIACRSNDDKMADYLAALNHEETRLAVACERAFLETLDGS 306 Query: 244 CKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFIS 300 C++ IAG+A K F G++ + DG E SR G D +++G DA + ++ + Sbjct: 307 CRTPIAGYAFRDKDGFCSFRGLIASPDGTRVLETSRKGAYTYEDMVSMGVDAGKELKERA 366 Query: 301 NKNVFNF 307 F++ Sbjct: 367 GPAFFDW 373 >gi|16800659|ref|NP_470927.1| porphobilinogen deaminase [Listeria innocua Clip11262] gi|23821696|sp|Q92BF8|HEM3_LISIN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|16414078|emb|CAC96822.1| hemC [Listeria innocua Clip11262] gi|313618766|gb|EFR90670.1| porphobilinogen deaminase [Listeria innocua FSL S4-378] Length = 309 Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats. Identities = 117/307 (38%), Positives = 166/307 (54%), Gaps = 7/307 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ +G+R S LAL + L + + P + I + TKGDRI + TL+++GGK Sbjct: 1 MKRKIIVGSRRSKLALTQSNWVIKKLKENY--PEIDFEIKEIVTKGDRILDVTLSKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF E+E+ L ID AVHS KD+P+ L GL I A RE D F+ + +L DL Sbjct: 59 GLFVSEVEQALSDEVIDFAVHSMKDVPSSLKDGLVIGAIPKRESPLDCFVFNEVSTLDDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +VIGTSSLRR A LL+ R D V RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 119 PKGAVIGTSSLRRAAQLLKHRPDFVVKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E ++ E P+ GQGA+ IE + + +++ I+HE+T V ER FL Sbjct: 179 LENTSLKLEDISPELCLPAVGQGALAIECRETDLQICDMLASIHHEETGICVEAERVFLK 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +L+G C+ IAGFA G +++F G+V +DG I E R G IG A+ + Sbjct: 239 KLNGGCEIPIAGFATKTGDSVHFKGLVGNADGSIILESERTG--ASPAEIGNQVAEELLS 296 Query: 299 ISNKNVF 305 + Sbjct: 297 EGADTII 303 >gi|114705601|ref|ZP_01438504.1| porphobilinogen deaminase [Fulvimarina pelagi HTCC2506] gi|114538447|gb|EAU41568.1| porphobilinogen deaminase [Fulvimarina pelagi HTCC2506] Length = 316 Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats. Identities = 137/302 (45%), Positives = 194/302 (64%), Gaps = 1/302 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLALA A E R+ L+ H + + I +ST GDRI +R L+E+GGKGLFT Sbjct: 8 IRIGTRGSPLALAQASEVRARLIAAHGLTEDDFAIEVISTSGDRILDRPLSEVGGKGLFT 67 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L+ ID AVHS+KDM T + GL I+A+L RED+RD FI A++L DL + Sbjct: 68 KEIEAALLDRRIDLAVHSSKDMATAIPDGLAITAFLEREDVRDAFIGRDAKTLADLPEGA 127 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G++SLRR+AL+ R R D++ I FRG ++TRL KL +A A LLA AG+ R++ + Sbjct: 128 TVGSASLRRQALIKRLRPDLNTIIFRGNVQTRLRKLGEGQADATLLALAGLNRMEMQHHA 187 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +IL EDFPP+PGQGAICIE+ + + + LV I H++T +++ ERAFL LDGSC+ Sbjct: 188 TDILEPEDFPPAPGQGAICIESRQGDTRIENLVSAIVHDETSIALHAERAFLKVLDGSCR 247 Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + IA A + F+G++L DG HEV G+ A+ +G A + + + + Sbjct: 248 TPIAARAVLWDSGRIAFHGMILRPDGTEVHEVHDEGDADGAVALGERAGRSVLEAAGPHF 307 Query: 305 FN 306 F+ Sbjct: 308 FD 309 >gi|89255577|ref|YP_512938.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica LVS] gi|156501520|ref|YP_001427585.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010342|ref|ZP_02275273.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica FSC200] gi|187932192|ref|YP_001892177.1| porphobilinogen deaminase [Francisella tularensis subsp. mediasiatica FSC147] gi|254368575|ref|ZP_04984591.1| hydroxymethylbilane synthase [Francisella tularensis subsp. holarctica FSC022] gi|290954410|ref|ZP_06559031.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica URFT1] gi|295312152|ref|ZP_06802958.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica URFT1] gi|123401648|sp|Q2A5R3|HEM3_FRATH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166217773|sp|A7N9H6|HEM3_FRATF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238058914|sp|B2SE34|HEM3_FRATM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|89143408|emb|CAJ78581.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella tularensis subsp. holarctica LVS] gi|156252123|gb|ABU60629.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica FTNF002-00] gi|157121478|gb|EDO65669.1| hydroxymethylbilane synthase [Francisella tularensis subsp. holarctica FSC022] gi|187713101|gb|ACD31398.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella tularensis subsp. mediasiatica FSC147] Length = 300 Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats. Identities = 108/304 (35%), Positives = 167/304 (54%), Gaps = 5/304 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK Sbjct: 1 MKQITIASRESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKA 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 58 LFMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLP 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ Sbjct: 118 KGAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELV 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 178 ERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C AI +A + + +V +SDGK + G+ D +G+ AQ + + Sbjct: 238 GCHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAY 295 Query: 303 NVFN 306 + Sbjct: 296 KILE 299 >gi|119897284|ref|YP_932497.1| porphobilinogen deaminase [Azoarcus sp. BH72] gi|119669697|emb|CAL93610.1| hydroxymethylbilane synthase [Azoarcus sp. BH72] Length = 316 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 102/300 (34%), Positives = 156/300 (52%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A ++ L ++ P + ++ ++T+GD+I +R L ++GGKGLF Sbjct: 15 IVIATRESRLALWQAEHVKARLEALY--PACTVELLGMTTRGDQILDRPLAKVGGKGLFV 72 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L+ G D AVHS KD+P ++ K + RE D F+S+ SL D+ + Sbjct: 73 KELETALLDGRADIAVHSMKDVPMEMGKAFALPCISAREVPLDAFVSNRYASLADMPPGT 132 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR++ L ++V RG ++TRL KL+ + AI+LA AG+ RL I Sbjct: 133 VVGTSSLRRESQLHAQYPFLAVTSLRGNLDTRLRKLDEGQYDAIILAAAGLTRLGLADRI 192 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGA+ IE + P+ + +N T V ERA L GSC+ Sbjct: 193 RATLPAEVSLPAAGQGALGIECLSSRPEVAAWLAPLNDPATSACVRAERAVARALAGSCE 252 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + +A +G+ L+ G V DG R G+ A +G A +R + + Sbjct: 253 VPLGAYAELRGARLWLRGFVARPDGSEIVRAEREGDPAAAEALGGALADDLRAQGAERIL 312 >gi|21241393|ref|NP_640975.1| porphobilinogen deaminase [Xanthomonas axonopodis pv. citri str. 306] gi|23821681|sp|Q8PPR3|HEM3_XANAC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|21106726|gb|AAM35511.1| porphobilinogen deaminase [Xanthomonas axonopodis pv. citri str. 306] Length = 304 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 168/305 (55%), Gaps = 4/305 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL + +L H P +V++P+ST+GD + +R+L IGG Sbjct: 1 MT--TLRIATRKSPLALWQSEHVADALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ GE DCAVHS KD+P +L + + A L R D D +S+ SL+ Sbjct: 57 KGLFLKELELAMLRGEADCAVHSLKDVPMELDEPFVLPAILERGDPADALVSNLYASLQA 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L Sbjct: 177 LEARISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRVCVEAERAMNRAL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC +A FA +G L+ G+V ++ +G+ D +GR AQ + Sbjct: 237 HGSCHVPVAAFARWEGQDLFLQGMVGSASDGRLIHADAHGSADDTEALGRRVAQGLFDKG 296 Query: 301 NKNVF 305 + Sbjct: 297 AAQLL 301 >gi|332975659|gb|EGK12548.1| porphobilinogen deaminase [Psychrobacter sp. 1501(2011)] Length = 339 Score = 251 bits (641), Expect = 8e-65, Method: Composition-based stats. Identities = 104/321 (32%), Positives = 171/321 (53%), Gaps = 21/321 (6%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I TR SPLA+ A +S L ++ P + ++ + T+GD+I + L +IGGKGL Sbjct: 11 KTLNIATRKSPLAMWQAEHIKSRLESLY--PELEVNLVTMVTQGDKILDTPLAKIGGKGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ L G D AVHS KD+P +L +GL + Y RE D F+S+ L+DL Sbjct: 69 FVKELEQALYDGRADIAVHSLKDVPMQLPEGLILGTYCKRETPTDAFVSNNYDKLEDLPE 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GT+SLRR+ + +R D+ + RG ++TRL+KL+ + AI+LA +G+KR++ + Sbjct: 129 GAVVGTASLRRQCQIKAFRPDLQIKSLRGNVQTRLSKLDAGEYDAIILATSGLKRVELSE 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 IK+ ++I+ P+ GQGA+ IE ++ EL+K +N + ERA L+G Sbjct: 189 RIKQEIDIDISLPAVGQGALAIECRSDDEAVLELLKPLNDGQARIRLKAERALNRRLEGG 248 Query: 244 CKSAIAGFAYCKGS-----------TLYFYGIVLASDGKIFH----EVSRNGN----RCD 284 C+ IA +A + TL+ G V + DG + +G+ Sbjct: 249 CQVPIAAYAVIEKDSEPSDQQIFQKTLWLRGRVGSEDGTTLLKAEKRIELSGDQAAREAQ 308 Query: 285 AINIGRDAAQYIRFISNKNVF 305 A +G + A + + ++ Sbjct: 309 AEQLGIEVADELLSLGADSIL 329 >gi|148909210|gb|ABR17705.1| unknown [Picea sitchensis] Length = 373 Score = 251 bits (641), Expect = 8e-65, Method: Composition-based stats. Identities = 135/307 (43%), Positives = 190/307 (61%), Gaps = 5/307 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A+ETR L H + II + T GD+I N+ L +IGGKGL Sbjct: 67 VRIGTRGSPLALAQAYETRDKLKSAHPELAEEGAVEIIIIKTTGDKILNQPLADIGGKGL 126 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G+ID AVHS KD+PT L G + LPRED+RDVFI TA SL +L Sbjct: 127 FTKEIDDALLGGKIDIAVHSMKDVPTYLPSGTILPCNLPREDVRDVFICPTAGSLAELQA 186 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S++G++SLRR++ +L + VI+FRG ++TRL KL + HA LLA+AG+KRL + Sbjct: 187 GSIVGSASLRRQSQILYRYPSLKVINFRGNVQTRLRKLKEGEVHATLLAFAGLKRLGMIQ 246 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + +L+ E+ P+ QGAI I N+ K + + +NHE+T +V CERAFL LDGS Sbjct: 247 HVTCLLSTEEMLPAIAQGAIGIACRSNDDKMADYLAALNHEETRLAVACERAFLETLDGS 306 Query: 244 CKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFIS 300 C++ IAG+A K F G++ + DG E SR G D +++G DA + ++ + Sbjct: 307 CRTPIAGYAFRDKDGFCSFRGLIASPDGTRVLETSRKGAYTHEDMVSMGVDAGKELKERA 366 Query: 301 NKNVFNF 307 F++ Sbjct: 367 GPAFFDW 373 >gi|115314083|ref|YP_762806.1| porphobilinogen deaminase [Francisella tularensis subsp. holarctica OSU18] gi|122325870|sp|Q0BP15|HEM3_FRATO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|115128982|gb|ABI82169.1| hydroxymethylbilane synthase [Francisella tularensis subsp. holarctica OSU18] Length = 300 Score = 251 bits (641), Expect = 8e-65, Method: Composition-based stats. Identities = 108/304 (35%), Positives = 167/304 (54%), Gaps = 5/304 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK Sbjct: 1 MKQITIASRESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKA 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 58 LFMKELEVAILSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLP 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ Sbjct: 118 KGAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELV 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 178 ERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C AI +A + + +V +SDGK + G+ D +G+ AQ + + Sbjct: 238 GCHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAY 295 Query: 303 NVFN 306 + Sbjct: 296 KILE 299 >gi|145220050|ref|YP_001130759.1| porphobilinogen deaminase [Prosthecochloris vibrioformis DSM 265] gi|189028096|sp|A4SFJ8|HEM3_PROVI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|145206214|gb|ABP37257.1| porphobilinogen deaminase [Chlorobium phaeovibrioides DSM 265] Length = 313 Score = 251 bits (641), Expect = 8e-65, Method: Composition-based stats. Identities = 118/308 (38%), Positives = 165/308 (53%), Gaps = 6/308 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG Sbjct: 1 MKKQLIIGTRSSPLALWQAEYTKAELSR--HFPDLDITLKLVKTTGDVLLDSPLSKIGDM 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT++IEK LI+ EID AVHS KD+PT +GL ISA+ RED RDV IS + DL Sbjct: 59 GLFTKDIEKFLIAKEIDLAVHSLKDVPTATPEGLIISAFTEREDTRDVIISKNGVKMLDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++ + TSSLRR + L R D + D RG + TR K + + A++LAYAG+ RL Sbjct: 119 PKNAKVATSSLRRMSQLKSLRPDFDIKDIRGNLNTRFQKFDEGEFDAMMLAYAGVYRLNF 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I EIL E P+ GQGA+ IET V++ + +E+VKV+NH +T ER+ L L Sbjct: 179 SDRISEILPHEIMLPAVGQGALGIETRVDDEQTREIVKVMNHSNTEYCCKAERSLLRHLQ 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIR 297 G C+ I +A K TL+ V + DG + A G + A+ + Sbjct: 239 GGCQIPIGSYASFKNGTLHLLAFVGSVDGTKGIRNEITKTGLTSPAQAEAAGIELAEELL 298 Query: 298 FISNKNVF 305 + + Sbjct: 299 KQGAEEIL 306 >gi|19849543|gb|AAL12220.1| porphobilinogen deaminase [Triticum aestivum] Length = 308 Score = 251 bits (641), Expect = 8e-65, Method: Composition-based stats. Identities = 130/305 (42%), Positives = 187/305 (61%), Gaps = 5/305 (1%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR SPLALA A +TR L H I I+ + T GD I ++ L +IGGKGLF Sbjct: 1 RIGTRGSPLALAQARQTRDELKAAHTELAEDGAIEIVIIKTTGDMILDKPLADIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+EI+ L+ G ID AVHS KD+PT L +G+ + LPRED+RD FI TA++L +L Sbjct: 61 TKEIDDALLQGSIDIAVHSMKDVPTYLPEGMILPCNLPREDVRDAFICLTAKTLGELPAG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SVI ++SLRR++ +L + V++FRG ++TRL KL HA LLA AG+KRL + Sbjct: 121 SVIASASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLGMPET 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 +L++++ P+ QGAI I N+ K E + +NHEDT +V CER FL+ LDG+C Sbjct: 181 ATSVLSVDEMLPAVAQGAIGITCRSNDDKMMEYLSSLNHEDTRLAVACEREFLSVLDGNC 240 Query: 245 KSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFISN 301 ++ IA +AY F G++ + DG I +E SR+G + D + +G+DA ++ + Sbjct: 241 RTPIAAYAYRDKDGNCSFRGLLASPDGSIVYETSRSGTYSFDDMVALGQDAGHELKSKAG 300 Query: 302 KNVFN 306 F+ Sbjct: 301 PGFFD 305 >gi|52081298|ref|YP_080089.1| porphobilinogen deaminase [Bacillus licheniformis ATCC 14580] gi|52786677|ref|YP_092506.1| porphobilinogen deaminase [Bacillus licheniformis ATCC 14580] gi|319647211|ref|ZP_08001433.1| porphobilinogen deaminase [Bacillus sp. BT1B_CT2] gi|81609014|sp|Q65GK1|HEM3_BACLD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|52004509|gb|AAU24451.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus licheniformis ATCC 14580] gi|52349179|gb|AAU41813.1| HemC [Bacillus licheniformis ATCC 14580] gi|317390558|gb|EFV71363.1| porphobilinogen deaminase [Bacillus sp. BT1B_CT2] Length = 313 Score = 251 bits (641), Expect = 8e-65, Method: Composition-based stats. Identities = 119/306 (38%), Positives = 171/306 (55%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LA+ L +++ P I + TKGDRI + TL+++GGKG Sbjct: 1 MRNIIVGSRRSKLAMTQTKWVIKKLEELN--PDFTFEIKEIVTKGDRILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ ++SGEID AVHS KDMP+ L +GL + RED RDV IS Q L DL Sbjct: 59 LFVKEIEQAMLSGEIDMAVHSMKDMPSVLPEGLMVGCIPKREDARDVLISKGRQKLADLK 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 +V+GTSSLRR A LL+ R D+ + RG I+TRL KL AI+LA AG+ R+ Sbjct: 119 QGAVVGTSSLRRSAQLLQMRPDLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLSRMGWK 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + V+ E L+ E P+ GQGA+ IE ++ + L +N T +V ERAFL ++ Sbjct: 179 DDVVTEFLDPESCLPAVGQGALAIECRGSDEELLSLFSRLNDRYTQLTVTAERAFLHAME 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAGFA + + G+V + DGK + + G D +GR+ A + Sbjct: 239 GGCQVPIAGFAKMDEDGVIELTGLVASPDGKTVYRETVKGK--DPEAVGRECAAVMSEKG 296 Query: 301 NKNVFN 306 K + + Sbjct: 297 AKALID 302 >gi|118496750|ref|YP_897800.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella tularensis subsp. novicida U112] gi|194324057|ref|ZP_03057832.1| porphobilinogen deaminase [Francisella tularensis subsp. novicida FTE] gi|208779979|ref|ZP_03247322.1| porphobilinogen deaminase [Francisella novicida FTG] gi|158512415|sp|A0Q481|HEM3_FRATN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|118422656|gb|ABK89046.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella novicida U112] gi|194321954|gb|EDX19437.1| porphobilinogen deaminase [Francisella tularensis subsp. novicida FTE] gi|208743983|gb|EDZ90284.1| porphobilinogen deaminase [Francisella novicida FTG] Length = 300 Score = 251 bits (641), Expect = 9e-65, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 167/304 (54%), Gaps = 5/304 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK Sbjct: 1 MKQITIASRESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKA 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E +++ + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 58 LFMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLP 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ Sbjct: 118 KGAIVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELV 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 178 ERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C AI +A + + +V +SDGK + G+ D +G+ AQ + + Sbjct: 238 GCHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAY 295 Query: 303 NVFN 306 + Sbjct: 296 KILE 299 >gi|114778663|ref|ZP_01453479.1| porphobilinogen deaminase [Mariprofundus ferrooxydans PV-1] gi|114551128|gb|EAU53689.1| porphobilinogen deaminase [Mariprofundus ferrooxydans PV-1] Length = 333 Score = 251 bits (641), Expect = 9e-65, Method: Composition-based stats. Identities = 115/301 (38%), Positives = 157/301 (52%), Gaps = 3/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L + P ++ + T+GD+I + L ++GGKGLFT Sbjct: 27 IRIATRRSPLALWQAEYIAAELEKMS--PDVTTELVKIVTRGDKILDVPLAKVGGKGLFT 84 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EI++ L G D AVHS KD+PT+L +G I A R D RD + T L L + Sbjct: 85 KEIDEALFDGRADVAVHSMKDVPTQLPEGTSIRALPERADPRDAAATITGGGLDTLPEGA 144 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSSLRR A L + RG I+TRL+K+ + AI+LA AGI+R+ E + Sbjct: 145 TIGTSSLRRVAQLQARFPTFKFVSVRGNIQTRLSKM-GQEVDAIILAAAGIRRMGMEDQM 203 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E ++ E P+ QG + I+T ++ LV +NH DT D ERAFLA L+G C+ Sbjct: 204 HEFIDTEMLLPAVAQGTLGIQTRNDDDVVNALVDRLNHADTVDRTRAERAFLARLEGGCQ 263 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IA FA G L G+V + DGKI G R D +G A I + + Sbjct: 264 VPIAAFATLDGDQLTLKGLVGSVDGKIVIRREIVGLRRDGAAMGIALADEILDAGARPIL 323 Query: 306 N 306 Sbjct: 324 E 324 >gi|310815397|ref|YP_003963361.1| porphobilinogen deaminase [Ketogulonicigenium vulgare Y25] gi|308754132|gb|ADO42061.1| porphobilinogen deaminase [Ketogulonicigenium vulgare Y25] Length = 314 Score = 251 bits (641), Expect = 9e-65, Method: Composition-based stats. Identities = 132/302 (43%), Positives = 176/302 (58%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P RIGTR SPLALA A+ETR L +P I + GD + ++ L EIGGKGL Sbjct: 10 QPLRIGTRGSPLALAQAYETRDRLAQAFALPHEAFQIEVIKVTGDMVQDKALREIGGKGL 69 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT EIE L+ G ID AVHS KDMP + GL + YLPRED+RD F+S +L D+ Sbjct: 70 FTREIEDALLDGSIDIAVHSMKDMPVEQPAGLLLDCYLPREDVRDAFVSLHGWTLADVPA 129 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 VIGTSSLRR+A +L R D++V++FRG ++TRL KL+ A A LA AG+ RL++ Sbjct: 130 GKVIGTSSLRRRAQILARRPDLTVVEFRGNVQTRLKKLDEGVADATFLAMAGLNRLQRGD 189 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V + L +E P+ QGAI IE ++ + ++ VI+ T + ERAFLA LDGS Sbjct: 190 VPLKALEVEQMLPAVAQGAIGIERRADDRIIEGMLAVIHDGPTGVRLAAERAFLAGLDGS 249 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C + IAG A G + G VL DG G DA IG + A+ +R ++ + Sbjct: 250 CHTPIAGLAEIIGDQIRLRGEVLRPDGSEAICDDMRGAAVDAAQIGAEMARKLRGLAGEG 309 Query: 304 VF 305 F Sbjct: 310 FF 311 >gi|167626913|ref|YP_001677413.1| porphobilinogen deaminase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189028091|sp|B0TW04|HEM3_FRAP2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|167596914|gb|ABZ86912.1| Hydroxymethylbilane synthase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 300 Score = 251 bits (641), Expect = 9e-65, Method: Composition-based stats. Identities = 104/304 (34%), Positives = 168/304 (55%), Gaps = 5/304 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I +R S LAL + + I + T+GD I ++ L +IGGK Sbjct: 1 MKQIVIASRESKLALWQTNYVKDRIQQELN---IRCQINTMKTQGDIILDKPLNKIGGKA 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E +++ + D AVHS KD+P +L +G +S+++PRED RD F+S+ S+ DL Sbjct: 58 LFMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLSSFMPREDPRDAFVSNKYSSIDDLP 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ Sbjct: 118 RGAIVGTSSLRRKAQLLHYRYDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELN 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I + + +E P+ GQG + IE + + + ++ +N D++ ERAF EL G Sbjct: 178 ERITQFIPVEISLPAVGQGIVVIEALDKSSEILQKLQKLNCSDSFCVATAERAFNQELKG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C AI +A + + +V +SDGK + G+ D + +G+ AQ + + Sbjct: 238 GCHVAIGAYAELHDNQITLTAMVASSDGKNILKRKLTGD--DPMRLGKLLAQEMIELGAY 295 Query: 303 NVFN 306 + Sbjct: 296 KILE 299 >gi|138896211|ref|YP_001126664.1| porphobilinogen deaminase [Geobacillus thermodenitrificans NG80-2] gi|196250167|ref|ZP_03148861.1| porphobilinogen deaminase [Geobacillus sp. G11MC16] gi|158513835|sp|A4IRG5|HEM3_GEOTN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|134267724|gb|ABO67919.1| Porphobilinogen deaminase [Geobacillus thermodenitrificans NG80-2] gi|196210351|gb|EDY05116.1| porphobilinogen deaminase [Geobacillus sp. G11MC16] Length = 309 Score = 251 bits (641), Expect = 9e-65, Method: Composition-based stats. Identities = 118/305 (38%), Positives = 174/305 (57%), Gaps = 5/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + L + P + + TKGDR+ + TL+++GGKG Sbjct: 1 MRNIVVGSRRSKLALTQTNWVINELKRLGA--PFTFEVKEIVTKGDRVLDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE ++++G ID AVHS KDMP L GL I + RED+RDV +S SL DL Sbjct: 59 LFVKEIEHEMLTGGIDMAVHSMKDMPAVLPSGLVIGSVPRREDVRDVLVSKGNLSLSDLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 +VIGTSSLRR A LL +R D+++ RG I+TRL KL N AI+LA AG+ R+ Sbjct: 119 SGAVIGTSSLRRSAQLLAYRPDVTIKWIRGNIDTRLAKLKNEDYDAIVLAAAGLARMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + VI E L+ + P+ GQGA+ +E ++ + +E + +N E T +V ERAFL +++ Sbjct: 179 DDVISEYLSPDVCVPAVGQGALAVECREDDVELREWLSRLNDEQTERAVRAERAFLQQME 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ IAG+A K ++ +V + DGK ++ G D +GR AA + Sbjct: 239 GGCQVPIAGYAEVKEGMVHLTALVASPDGKEKYKEIVIG--ADPEEVGRQAAALLSEQGA 296 Query: 302 KNVFN 306 K + Sbjct: 297 KELIE 301 >gi|319651737|ref|ZP_08005863.1| porphobilinogen deaminase [Bacillus sp. 2_A_57_CT2] gi|317396556|gb|EFV77268.1| porphobilinogen deaminase [Bacillus sp. 2_A_57_CT2] Length = 311 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 166/306 (54%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL S L + P + + TKGD+I + TL+++GGKG Sbjct: 1 MRKIIVGSRRSKLALTQTNWVISQLKSI--DPSFEFEVKEIVTKGDKILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ ++ EID AVHS KDMP L GL I + RED RD IS L DL Sbjct: 59 LFVKEIEQAMLDEEIDMAVHSMKDMPAVLPAGLTIGSIPEREDHRDALISKGHIKLNDLR 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S++GTSSLRR A LL R D+ + RG I+TRL+KL + AI+LA AG+ R+ Sbjct: 119 EGSIVGTSSLRRGAQLLAQRPDLEIKWIRGNIDTRLSKLETEEYDAIILAAAGLSRMGWA 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 V+ E L E P+ GQGA+ IE ++ + + L+ +T +V ERAFL +++ Sbjct: 179 ADVVTEFLEPEVCVPAVGQGALSIECRESDKELRALLDKFTCSETNQTVRAERAFLHKME 238 Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAGFA + G+V + DGK+ ++ + G+ D +G A + Sbjct: 239 GGCQVPIAGFATINETGEMELTGLVGSPDGKVIYKETLTGS--DPEELGVKMADMLTEQG 296 Query: 301 NKNVFN 306 K + + Sbjct: 297 AKELID 302 >gi|116622285|ref|YP_824441.1| porphobilinogen deaminase [Candidatus Solibacter usitatus Ellin6076] gi|116225447|gb|ABJ84156.1| hydroxymethylbilane synthase [Candidatus Solibacter usitatus Ellin6076] Length = 297 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 116/301 (38%), Positives = 153/301 (50%), Gaps = 11/301 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LAL A + L H I + T GD+IT+ L ++G KGLFT Sbjct: 2 LVIASRGSQLALWQAHWVEAQLQAA----GHECRIEIIKTTGDKITDVPLAKVGTKGLFT 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G AVHS KD+PT+L +GL + A RED RD I T L +L L + Sbjct: 58 KEIEEALLDGRAQLAVHSLKDLPTELPEGLVLGAVPKREDPRDAVIGKT---LAELPLGA 114 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR A L R R D+ V RG ++TRL KL+ + AILLA AG+KRL I Sbjct: 115 KVGTSSLRRSAQLKRLRPDLVVESIRGNLDTRLRKLDEGQYDAILLAAAGMKRLGWGARI 174 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 EIL + P+ GQGA+ IET L V+NH DT +V ER L L G C+ Sbjct: 175 AEILPPDLMCPAVGQGALAIETR----AGFVLPAVLNHADTHTAVLAERGLLGALGGGCQ 230 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 I A G + G+V A DG G +A IG+ + + + Sbjct: 231 VPIGAHATVAGGRVRLLGLVAAPDGSEIVRAEAEGASGEAAEIGKRLGAELLARGARRIL 290 Query: 306 N 306 + Sbjct: 291 D 291 >gi|82703803|ref|YP_413369.1| porphobilinogen deaminase [Nitrosospira multiformis ATCC 25196] gi|82411868|gb|ABB75977.1| hydroxymethylbilane synthase [Nitrosospira multiformis ATCC 25196] Length = 321 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 110/302 (36%), Positives = 161/302 (53%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 I TR S LAL A R L +++ P I ++T+GD+I + TL++IGGKGL Sbjct: 8 NKIVIATRESALALWQANFIRDRLAELY--PQMEFQISGMTTRGDQILDVTLSKIGGKGL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ L G D AVHS KD+P + G ++A RED RD F+S+ L L Sbjct: 66 FIKELEQALEDGRADIAVHSMKDVPMDMPAGFALAAITEREDPRDAFVSNKYARLDALPP 125 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL + Sbjct: 126 GSVVGTSSLRRESQLRARFPHLQVQPLRGNVQTRLRKLDEGQFAAIILAAAGLKRLGLAE 185 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I +L+ + P+ GQGA+ IE + +L++ ++H T V ERA L GS Sbjct: 186 RITALLSPDLSLPAVGQGALGIECRADRSDLIKLMEPLHHIPTARCVEAERAMSRALGGS 245 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ + GFA G L G V + DG NG+ D +IG A+ ++ + Sbjct: 246 CEVPLGGFAEIDGHVLRLRGFVASQDGIRMVSDELNGSPDDCASIGAQLAKNLKAKGAEE 305 Query: 304 VF 305 + Sbjct: 306 IL 307 >gi|156742007|ref|YP_001432136.1| porphobilinogen deaminase [Roseiflexus castenholzii DSM 13941] gi|189028097|sp|A7NKU8|HEM3_ROSCS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|156233335|gb|ABU58118.1| porphobilinogen deaminase [Roseiflexus castenholzii DSM 13941] Length = 303 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 104/304 (34%), Positives = 160/304 (52%), Gaps = 3/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + IGTR S LAL R +L H P + + ++T+GD I +R L IG K Sbjct: 1 MRNSLTIGTRASKLALVQTHMIRDALQAAH--PGLTVAVERITTRGDIILDRPLNAIGDK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF EIE+ + +G +D AVHSAKD+P+ L + ++ R D RD ++ +L L Sbjct: 59 GLFVVEIEEAMRAGRVDLAVHSAKDLPSTLPPDMTLAVCPRRADPRDALVAQPGMTLASL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSSLRR L R D++++D RG ++TRL KL + AI+LA AG+KRL Sbjct: 119 PHGARVGTSSLRRACQLRALRPDLTLLDLRGNVDTRLRKLREGQYDAIVLAAAGLKRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+VI E+L + P+ GQG I +E + + L+ ++ ++ ERAFLA + Sbjct: 179 EEVITELLEPDVLIPAVGQGIIGVEARAGDDEVLRLLAPLDDPAARAAITAERAFLARIG 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ + A +G L YG++ A DG R+G+ D +G A+ + Sbjct: 239 GGCRVPVGALALLEGDELLLYGMIGALDG-RMVRGMRSGSASDPAGLGSALAEELLDAGG 297 Query: 302 KNVF 305 + + Sbjct: 298 QALL 301 >gi|253575681|ref|ZP_04853017.1| porphobilinogen deaminase [Paenibacillus sp. oral taxon 786 str. D14] gi|251845019|gb|EES73031.1| porphobilinogen deaminase [Paenibacillus sp. oral taxon 786 str. D14] Length = 320 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 114/318 (35%), Positives = 163/318 (51%), Gaps = 16/318 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDV---HKIPPHNIVIIPLSTKGDRITNRTLTE 57 M K+ +GTR S LAL + L + H +P + I + TKGDRI + TL++ Sbjct: 1 MTKRTIVVGTRQSQLALTQTGQVIDDLKAICREHHLP-FDFEIRKIVTKGDRILDVTLSK 59 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 +GGKGLF +EIE+ +++GEID AVHS KDMP+ L GL A R D RD IS +S Sbjct: 60 VGGKGLFVKEIEQAMLNGEIDLAVHSMKDMPSVLPDGLMNGAVPRRVDPRDALISRNGRS 119 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L +L + +GTSSLRR + L +R D + RG I++RL KL AI+LA AG+ Sbjct: 120 LDELPQGAKVGTSSLRRASQLRAYRPDFVLEPIRGNIDSRLRKLEEEGFDAIILAAAGLF 179 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ E I L E P+ GQGA+ IE ++ + + L+ + N DT +V ER FL Sbjct: 180 RMGWEHRITAFLPAEVCLPAVGQGALGIECREDDDEVRRLLSLYNDPDTAVTVAAERRFL 239 Query: 238 AELDGSCKSAIAGFAYCKGST----------LYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 L+G C+ I +A L G+V ++DG + S G D Sbjct: 240 GVLNGGCQVPIGAYATLLPEEGASGETGRPRLRLTGMVGSADGTTILKESAEGT--DPTE 297 Query: 288 IGRDAAQYIRFISNKNVF 305 +G A + + + Sbjct: 298 LGEQLAGRLISMGAAALL 315 >gi|56421180|ref|YP_148498.1| porphobilinogen deaminase [Geobacillus kaustophilus HTA426] gi|61213219|sp|Q5KWK6|HEM3_GEOKA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|56381022|dbj|BAD76930.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Geobacillus kaustophilus HTA426] Length = 309 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 118/305 (38%), Positives = 174/305 (57%), Gaps = 5/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + L + P + + TKGDR+ + TL+++GGKG Sbjct: 1 MRNIVVGSRRSKLALTQTKWVINELKQLGA--PFTFEVKEIVTKGDRVLDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE +L++G ID AVHS KDMP L +GL I A RED RDV +S + L DL Sbjct: 59 LFVKEIEHELLAGGIDMAVHSMKDMPAVLPEGLVIGAVSRREDARDVLVSKGNRMLSDLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 SVIGTSSLRR A LL +R D+++ RG I+TRL KL + + AI+LA AG+ R+ Sbjct: 119 PGSVIGTSSLRRSAQLLAYRPDLTIKWIRGNIDTRLAKLESEEYDAIVLAAAGLARMGWG 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + VI + L + P+ GQGA+ +E ++ + ++ + +N E T +V ERAFL +++ Sbjct: 179 DDVISDYLPFDVCVPAVGQGALAVECREDDDELRQWLSRLNDEQTERAVRAERAFLQQME 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ IAG+A K T+ +V + DGK ++ G D +GR AA + Sbjct: 239 GGCQVPIAGYAEVKEGTVRLTALVASPDGKEMYKEIVTG--ADPEAVGRQAAAILSEQGA 296 Query: 302 KNVFN 306 K + Sbjct: 297 KALIE 301 >gi|148655885|ref|YP_001276090.1| porphobilinogen deaminase [Roseiflexus sp. RS-1] gi|166217784|sp|A5UU37|HEM3_ROSS1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|148567995|gb|ABQ90140.1| hydroxymethylbilane synthase [Roseiflexus sp. RS-1] Length = 303 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 102/304 (33%), Positives = 162/304 (53%), Gaps = 3/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ IGTR S LAL + R +L H P + + ++T+GD I +R L IG K Sbjct: 1 MKQTLIIGTRASKLALVQTYMVRDALQSAH--PGLTVAVEHITTRGDIILDRPLNAIGDK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF EIE+ + +G ID AVHSAKD+P+ L + ++A R D RD ++ +L L Sbjct: 59 GLFVVEIEEAMRAGRIDLAVHSAKDLPSVLPPDMTLAACPRRADPRDALVAQPGMTLAAL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSSLRR L R D++++D RG ++TRL KL + AI+LA AG+KRL Sbjct: 119 PSGARVGTSSLRRACQLRALRPDLTLVDLRGNVDTRLRKLREGQYDAIVLAAAGLKRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I E++ + P+ GQG I +E ++ + L+ ++ + ++ ERAFLA + Sbjct: 179 DGAISELIEPDVLIPAVGQGVIGVEARADDEEVLRLLAPLDDQAARIAITAERAFLARIG 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ + A+ +G L G++ A DG + G+ D + +G A + Sbjct: 239 GGCQVPVGALAHLEGDELLLRGMIGARDG-RMVRGMQRGSASDPVGLGCALADELLDQGG 297 Query: 302 KNVF 305 + + Sbjct: 298 RALL 301 >gi|78187286|ref|YP_375329.1| porphobilinogen deaminase [Chlorobium luteolum DSM 273] gi|123757188|sp|Q3B2Z5|HEM3_PELLD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78167188|gb|ABB24286.1| Porphobilinogen deaminase [Chlorobium luteolum DSM 273] Length = 313 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 122/308 (39%), Positives = 166/308 (53%), Gaps = 6/308 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK IGTR SPLAL A T++ L P I + + T GD + + L++IG Sbjct: 1 MKKQLIIGTRSSPLALWQAEFTKAELSR--HFPDLEITLKLVKTTGDVLLDSPLSKIGDM 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT++IEK LI+ EID AVHS KD+PT +GL ISA+ RED RDV IS T L DL Sbjct: 59 GLFTKDIEKFLIAKEIDLAVHSLKDVPTATPEGLIISAFTEREDTRDVIISKTGAKLLDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++ + TSSLRR + L R D + D RG + TR K + + A++LAYAG+ RL Sbjct: 119 PKNAKVATSSLRRMSQLKSLRPDFEICDIRGNLNTRFKKFDEGEFDAMMLAYAGVYRLNF 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I EIL E P+ GQGA+ IET V++ + +E+VKV+NH T ERA L L Sbjct: 179 SDRISEILPHEIMLPAVGQGALGIETRVDDEQTREIVKVMNHSTTEYCCKAERALLRHLQ 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIR 297 G C+ I +A K TL+ V ++DG I + A G + A+ + Sbjct: 239 GGCQIPIGAYASFKNGTLHLLAFVGSTDGTIGIRDEITKTGLTSPSQAEEAGIELAKELL 298 Query: 298 FISNKNVF 305 + + Sbjct: 299 KQGAEKIL 306 >gi|257453642|ref|ZP_05618932.1| porphobilinogen deaminase [Enhydrobacter aerosaccus SK60] gi|257449100|gb|EEV24053.1| porphobilinogen deaminase [Enhydrobacter aerosaccus SK60] Length = 319 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 107/309 (34%), Positives = 162/309 (52%), Gaps = 10/309 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR SPLAL A ++ L ++ P + ++P+ T+GD+I + L +IGGKGLF Sbjct: 6 TLNIATRQSPLALWQAEHIQARLQALY--PSLTVNLVPMVTQGDKILDTPLAKIGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E+ L D AVHS KD+P L +GL + AY RE D FIS+ +SL L Sbjct: 64 VKELEQALYEKRADIAVHSLKDVPMVLPEGLTLGAYCEREQPTDAFISNHYESLDALPQG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+ + ++R D+ +I RG + TRL+KL+ + AI+LA +G+ RL Sbjct: 124 AKLGTSSLRRQCQIQQYRPDLEIISLRGNVGTRLSKLDAGEYDAIILATSGLTRLGLTDR 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ L+ P+ GQGA+ IE ++ L+K +N E + V ERA L G C Sbjct: 184 IRHELDTHISLPAVGQGALAIECRSDDADVLALLKPLNDEPSRLCVMAERAMNRHLQGGC 243 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD--------AINIGRDAAQYI 296 + IAGFA + ++ G V + DGK + + D A +G A+ + Sbjct: 244 QVPIAGFATIQDGQIHLQGRVGSVDGKTLLKAEHHNALVDDARESQQIAEAVGVVVAEAL 303 Query: 297 RFISNKNVF 305 + Sbjct: 304 IAQGADKIL 312 >gi|328675303|gb|AEB27978.1| Porphobilinogen deaminase [Francisella cf. novicida 3523] Length = 300 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 102/304 (33%), Positives = 169/304 (55%), Gaps = 5/304 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I +R S LAL + + IP I + T+GD I ++ L ++GGK Sbjct: 1 MKQITIASRESKLALWQTNFVKKYIQKELNIP---CEITTMKTQGDIILDKPLNKVGGKA 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E + +G+ + AVHS KD+P +L +G +++++PRED RD F+S+ S+ DL Sbjct: 58 LFMKELEIAMQNGKANIAVHSLKDVPYQLPQGFCLASFMPREDPRDAFVSNKYSSIDDLP 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRRKA LL +R D+ + D RG ++TRL+KL++ + AI+LA AG+ RL+ Sbjct: 118 KGAIVGTSSLRRKAQLLHYRDDLVIKDLRGNVQTRLSKLDSGEYDAIILASAGLIRLELN 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I + + +E P+ GQG + IE + + E ++ +N ++ ERAF EL G Sbjct: 178 ERITQFIPVEISLPAVGQGIVVIEALDRDVELLEKLQKLNCSTSFRMATAERAFNQELKG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C AI +A + + +V +SDGK + G+ D +G+ A+ + + Sbjct: 238 GCHVAIGAYAELNNNQITLTAMVASSDGKKILKRKMIGD--DPTKVGKLLAREMIELGAY 295 Query: 303 NVFN 306 + Sbjct: 296 KILE 299 >gi|126733455|ref|ZP_01749202.1| porphobilinogen deaminase [Roseobacter sp. CCS2] gi|126716321|gb|EBA13185.1| porphobilinogen deaminase [Roseobacter sp. CCS2] Length = 311 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 131/301 (43%), Positives = 175/301 (58%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 PF IGTR SPLALA A ETRS LM +P I + GD I +R L EIGGKGLF Sbjct: 11 PFNIGTRGSPLALAQAHETRSRLMAAFNLPEEAFAICVIKVTGDAIQDRPLKEIGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE+ L+ G ID AVHS KDMP GL + YLPRED+RD F+S A SL DLA Sbjct: 71 TREIEEALLDGSIDIAVHSMKDMPVDQPGGLLLDTYLPREDVRDAFVSLNASSLNDLAEG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR++ LL R D+++++FRG ++TRL KL + A A LA AG+ RL V Sbjct: 131 ATVGTSSLRRRSQLLAKRPDLNIVEFRGNVQTRLKKLGDGVAEATFLAMAGLNRLHMTDV 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + ED P+ QGAI IE ++ +A ++ I+ T + ER+FLA LDGSC Sbjct: 191 PRTAVAPEDMLPAVAQGAIGIERRGDDSRAAAMLDAIHDHATGRRLAAERSFLAALDGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ I G A G ++ G +L +DG +G+ D +G A + + + Sbjct: 251 ETPIGGLAELDGGSIRLRGEILRTDGTEVFADDMSGSIEDGPAMGHAMAAKLLEKAGPDF 310 Query: 305 F 305 F Sbjct: 311 F 311 >gi|224476761|ref|YP_002634367.1| porphobilinogen deaminase [Staphylococcus carnosus subsp. carnosus TM300] gi|254800259|sp|B9DNE1|HEM3_STACT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|222421368|emb|CAL28182.1| porphobilinogen deaminase [Staphylococcus carnosus subsp. carnosus TM300] Length = 308 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 107/306 (34%), Positives = 176/306 (57%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L V P +I I + TKGDRI ++ L+++GGKG Sbjct: 1 MRKLVVGSRRSKLALTQSRQFIERLKKVE--PDLDIEIKEIVTKGDRIVDKQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+++L EID A+HS KD+P++L GL + RE D FIS L DL Sbjct: 59 LFVKEIQQELFDHEIDMAIHSLKDVPSELPDGLTLGCIPDREIPLDAFISKNHVQLADLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S++GTSSLRR A +L ++ + RG I+TRL+KL AI+LA AG++R+ Sbjct: 119 DGSIVGTSSLRRGAQILAKYPNLEIKWIRGNIDTRLSKLETEDYDAIILAAAGLRRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ E L+ E P+ GQGA+ IE ++ + +L+ +++++ + V ER FL E++ Sbjct: 179 DDIVTEYLDPELLVPAIGQGALGIECRSDDTELLDLLSKVHNQEVAECVTAERTFLKEMN 238 Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ I G+A + L F G++++ DGK E + G D + +G++ + ++ Sbjct: 239 GSCQVPIGGYATIDDNGRLTFTGLIMSPDGKQRFEQTATG--NDPVELGKEVSDILKEQG 296 Query: 301 NKNVFN 306 K + + Sbjct: 297 AKEIID 302 >gi|258404816|ref|YP_003197558.1| porphobilinogen deaminase [Desulfohalobium retbaense DSM 5692] gi|257797043|gb|ACV67980.1| porphobilinogen deaminase [Desulfohalobium retbaense DSM 5692] Length = 311 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 101/304 (33%), Positives = 154/304 (50%), Gaps = 3/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + I TR S LAL A + L + + P + + + T+GD+I + L +IGGK Sbjct: 1 MRSLTIATRGSKLALWQANHIKGRLEERY--PGIEVHLEVIKTQGDKILDVPLAKIGGKA 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ ++ G D AVHS KD+P +L +GL + RED D +S +L+++ Sbjct: 59 LFVKEIEEAMLDGRADLAVHSMKDVPAELPEGLTLGVIPQREDYTDCLLSQHYTTLEEIP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IGTSSLRRK LLR R D+ + D RG ++TR+ KL AI++A AG++RL+ Sbjct: 119 EGATIGTSSLRRKTQLLRLRPDLVIQDLRGNLDTRIRKLEEGMFDAIVVASAGLRRLQTG 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 L F P+ GQGA+ IE + +E++ ++H T V ERAFL L+G Sbjct: 179 ARYMTELAPPQFLPAVGQGALGIEYPEDRKDLEEMLGFLDHPPTRFCVLTERAFLHRLEG 238 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ I G A + + L+ V G+ D + +G+ A I Sbjct: 239 GCQVPIGGHAVMSESNKLHLDCFVADLHGQQCLRREGEAKPKDGVALGQRLADDILASGG 298 Query: 302 KNVF 305 + Sbjct: 299 AEIL 302 >gi|226942049|ref|YP_002797123.1| porphobilinogen deaminase [Laribacter hongkongensis HLHK9] gi|254800253|sp|C1D679|HEM3_LARHH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226716976|gb|ACO76114.1| Hem3 [Laribacter hongkongensis HLHK9] Length = 308 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 160/304 (52%), Gaps = 2/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I +R SPLA+ A R+ L ++ P + I+ ++T+GDRI ++TL +IGGKG Sbjct: 1 MKQVVIASRESPLAMWQAEHIRARLQALY--PGLEVSILGITTQGDRILDKTLNKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E + G+ D AVHS KD+P L +G ++A RED RD F+S SL +L Sbjct: 59 LFVKELELAMQEGQADLAVHSIKDVPMDLPEGFALAAICEREDPRDAFVSSRYASLSELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GT+SLRR++ + + V RG ++TRL KL+ + AI+LA +G+KR+ Sbjct: 119 AGAVVGTASLRRESQIRARYPHLLVKPLRGNLQTRLRKLDEGQYDAIILAASGLKRMGLA 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I+ L+ D P+ GQGA+ IE + L+ +NH T+ V ERA L Sbjct: 179 ERIRMELSTADSLPAVGQGALGIEIRADRTDLMALLAPLNHPATYACVTAERAMGRALGA 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC+ + G+A L G V DG A +GR A+ + Sbjct: 239 SCQIPVGGYAEQHEHMLVMRGFVATPDGTTLLHAEATAPAEYADALGRTIAKKLLDQGAD 298 Query: 303 NVFN 306 +V + Sbjct: 299 DVID 302 >gi|261418339|ref|YP_003252021.1| porphobilinogen deaminase [Geobacillus sp. Y412MC61] gi|297529191|ref|YP_003670466.1| porphobilinogen deaminase [Geobacillus sp. C56-T3] gi|319767702|ref|YP_004133203.1| porphobilinogen deaminase [Geobacillus sp. Y412MC52] gi|261374796|gb|ACX77539.1| porphobilinogen deaminase [Geobacillus sp. Y412MC61] gi|297252443|gb|ADI25889.1| porphobilinogen deaminase [Geobacillus sp. C56-T3] gi|317112568|gb|ADU95060.1| porphobilinogen deaminase [Geobacillus sp. Y412MC52] Length = 310 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 117/305 (38%), Positives = 173/305 (56%), Gaps = 5/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + L + P + + TKGDR+ + TL+++GGKG Sbjct: 1 MRNIVVGSRRSKLALTQTKWVINELKQLGA--PFTFEVKEIVTKGDRVLDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE +L++G ID AVHS KDMP L +GL I A RED RDV +S + L DL Sbjct: 59 LFVKEIEHELLAGGIDMAVHSMKDMPAVLPEGLVIGAVPRREDARDVLVSKGNRMLSDLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 SVIGTSSLRR A LL +R D+++ RG I+TRL KL + + AI+LA AG+ R+ Sbjct: 119 PGSVIGTSSLRRSAQLLAYRPDLTIKWIRGNIDTRLAKLESEEYDAIVLAAAGLARMGWG 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + VI + L + P+ GQGA+ +E ++ + ++ + +N E T +V ERAFL +++ Sbjct: 179 DDVISDYLPFDVCVPAVGQGALAVECREDDDELRQWLSRLNDEQTERAVRAERAFLQQME 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ IAG+A G + +V + DGK ++ G D +GR AA + Sbjct: 239 GGCQVPIAGYAEADGGMVRLTALVASPDGKEKYKEMVTG--ADPEAVGRQAAAVLIEQGA 296 Query: 302 KNVFN 306 K + Sbjct: 297 KALIE 301 >gi|254431329|ref|ZP_05045032.1| porphobilinogen deaminase [Cyanobium sp. PCC 7001] gi|197625782|gb|EDY38341.1| porphobilinogen deaminase [Cyanobium sp. PCC 7001] Length = 321 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 105/313 (33%), Positives = 151/313 (48%), Gaps = 9/313 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI +R S LA+ R L H I I ++T+GD+I + L +IG Sbjct: 1 MAGSTLRIASRRSQLAMVQTHWVRDELAKAHD--DLTITIEAMATQGDKILDVALAKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQS 117 KGLFT+E+E +++ D AVHS KD+PT L +GL + RED D + H ++ Sbjct: 59 KGLFTKELEAQMLVDRADIAVHSLKDLPTNLPEGLMLGCITEREDPADALVVHAKHRDKT 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L SV+GTSSLRR A L ++ D RG + TRL KL++ + ++LA AG+ Sbjct: 119 LATLPEGSVVGTSSLRRLAQLRHHFPHLTFKDVRGNVITRLEKLDSGEFDCLILAAAGLG 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I E+++ + GQGA+ IE + E +KV+ H T ERAFL Sbjct: 179 RLGLGDRIHELIDPSISLHAVGQGALGIECREGDEPVLEQIKVLEHLPTARRCLAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKG----STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 EL+G C+ I G L G+V + DG+ G + D IG A Sbjct: 239 RELEGGCQVPIGVNTRFDGAGESGELVLTGMVASLDGQRLIRDEARGPQDDPEAIGIALA 298 Query: 294 QYIRFISNKNVFN 306 + +R + Sbjct: 299 RSLRNQGAGEILE 311 >gi|86609244|ref|YP_478006.1| porphobilinogen deaminase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557786|gb|ABD02743.1| porphobilinogen deaminase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 310 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 102/303 (33%), Positives = 151/303 (49%), Gaps = 5/303 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R S LAL L + H P + + LST+GD I + L +IG KGLFT Sbjct: 1 MRIASRKSELALVQTQWVMGQLQEHH--PGLPLELNTLSTQGDIILDVALAKIGDKGLFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK---DLA 122 +E+E L++G D AVHS KD+PT+L +GL + A RED D + L Sbjct: 59 KELEVSLLNGSSDLAVHSLKDLPTRLPEGLVLGAITRREDPLDALVVGEKFRDYRLATLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR A L + D RG + TRL KL + ++LA AG+KRL K Sbjct: 119 EGTVIGTSSLRRLAQLRHAFPHLHFKDVRGNLNTRLAKLERGEYDGLILAVAGLKRLGKA 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E+L+ + GQG++ IE + + EL++ + + ERAFL L+G Sbjct: 179 DRIHEVLDPGVSLYAVGQGSLGIECRQGDERILELIRPLADAEATARCLAERAFLRALEG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I + +G L+ G+V DG+ ++ G+ D +G A+ ++ Sbjct: 239 GCQVPIGVHSQVQGEALHLTGMVADLDGRRLIRDTQTGSTADPEAVGMALAEKLKQQGAD 298 Query: 303 NVF 305 + Sbjct: 299 EIL 301 >gi|289667461|ref|ZP_06488536.1| porphobilinogen deaminase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 304 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 168/305 (55%), Gaps = 4/305 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGG Sbjct: 1 MT--TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G+ DCAVHS KD+P +L + A L R D D +S+ SL+ Sbjct: 57 KGLFLKELELAMLRGDADCAVHSLKDVPMELDDPFVLPAILERGDPADALVSNLYASLQA 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L Sbjct: 177 LDARISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRAL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC +A FA +G L+ G+V ++ +G+ D +GR AQ + Sbjct: 237 HGSCHVPVAAFARWEGEGLFLQGMVGSASDGRLIHADAHGSADDTEALGRRVAQGLFDKG 296 Query: 301 NKNVF 305 + Sbjct: 297 AAQLL 301 >gi|166710503|ref|ZP_02241710.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 304 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 169/305 (55%), Gaps = 4/305 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGG Sbjct: 1 MT--TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G+ DCAVHS KD+P +L + A L R D D +S+ SL+ Sbjct: 57 KGLFLKELELAVLRGDADCAVHSLKDVPMELDDPFVLPAILERGDPADALVSNLYASLQA 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L Sbjct: 177 LDARISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRAL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC +A FA +G L+ G+V ++ +G+ D ++GR AQ + Sbjct: 237 HGSCHVPVAAFARWEGEGLFLQGMVGSASDGRLIHADAHGSADDTEDLGRRVAQGLFDKG 296 Query: 301 NKNVF 305 + Sbjct: 297 AAQLL 301 >gi|62259213|gb|AAX77846.1| unknown protein [synthetic construct] Length = 335 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 168/305 (55%), Gaps = 5/305 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK Sbjct: 26 EMKQITIASRESKLALWQTNFVKNRIQLELNIP---CEISTMKTQGDIILDQPLNKIGGK 82 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 LF +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 83 ALFMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDL 142 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ Sbjct: 143 PKGAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLEL 202 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL Sbjct: 203 VERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELK 262 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C AI +A + + +V +SDGK + G+ D +G+ AQ + + Sbjct: 263 GGCHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGA 320 Query: 302 KNVFN 306 + Sbjct: 321 YKILE 325 >gi|188584576|ref|YP_001928021.1| porphobilinogen deaminase [Methylobacterium populi BJ001] gi|179348074|gb|ACB83486.1| porphobilinogen deaminase [Methylobacterium populi BJ001] Length = 309 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 119/307 (38%), Positives = 170/307 (55%), Gaps = 4/307 (1%) Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M +P RIGTR SP+ALA R ++ + P I+ +ST DR+ +R L+EIG Sbjct: 1 MSLSRPLRIGTRGSPMALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL- 118 GKGLFT+E+E+ L + ID AVHS KD+ T L GL I+ L R+D RD F+S + Sbjct: 59 GKGLFTKELEQALFADTIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSAGTANGL 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 DL + +GTSSLRR A +L R D+ ++ RG TR+ KL + A LLA AG++R Sbjct: 119 ADLPSGARVGTSSLRRGAQVLMHRPDLMIVPLRGNANTRMRKLEAGECDATLLALAGLQR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L E V + +L +E+ P+ QGA+ IE + + L+ + T +++ ER LA Sbjct: 179 LGMEDVARSVLPVEEMLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLA 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 ELDGSC++ IA A G + G++ DG V R G +A IGRDA ++ Sbjct: 239 ELDGSCRTPIAALAQVNGDRIALDGLLFLPDGSRHWAVHREGPAAEADAIGRDAGAELKR 298 Query: 299 ISNKNVF 305 + F Sbjct: 299 SAGDVYF 305 >gi|255066348|ref|ZP_05318203.1| hydroxymethylbilane synthase [Neisseria sicca ATCC 29256] gi|255049558|gb|EET45022.1| hydroxymethylbilane synthase [Neisseria sicca ATCC 29256] Length = 312 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 102/306 (33%), Positives = 168/306 (54%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL++IGG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKTLY--PDCEVEILGMTTRGDQILDKTLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L + ++A R + D F+S+ L++ Sbjct: 59 KGLFIKELEQALQDGRADLAVHSIKDVPMDLPEDFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +V+GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + +++K +NH+ T V ERA L Sbjct: 179 LDERIRLILSEADSLPAAGQGALGIEIAAHRTDLLDVLKPLNHDVTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADAQAPATYADALGRAVAKKLADDG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 AQELIE 304 >gi|302879710|ref|YP_003848274.1| porphobilinogen deaminase [Gallionella capsiferriformans ES-2] gi|302582499|gb|ADL56510.1| porphobilinogen deaminase [Gallionella capsiferriformans ES-2] Length = 317 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 103/300 (34%), Positives = 159/300 (53%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A R L ++ P ++ I+ ++T+GD+I + +L++IGGKGLF Sbjct: 15 LVIASRESALAMWQAEHIRDRLRALY--PQTDVSILGMTTQGDQILDVSLSKIGGKGLFV 72 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P L +G ++A RED D F+S+ ++L L S Sbjct: 73 KELETALEDGRADFAVHSLKDVPMVLPEGFVLAAIGEREDPHDAFVSNNYENLAALPAGS 132 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR++ L + + RG ++TRL KL+ AI+LA AG+KRL I Sbjct: 133 VVGTSSLRRESQLRARFPHLVIEPLRGNVQTRLRKLDEGLYAAIILAAAGLKRLGLATRI 192 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + +++ ED P+ GQGA+ IE + ++ ++H DT V ERA L+GSC+ Sbjct: 193 RAVISSEDSLPAVGQGALGIECRADRLDVIAALQPLHHPDTAACVFAERAMSRALNGSCQ 252 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + GFA + L G V + DG+ G +G A+ + + Sbjct: 253 VPLGGFAEVQNGQLRMRGFVASPDGQRVIRAEAMGEIAAPEALGGQIAKSLLAQGAGEIL 312 >gi|84625435|ref|YP_452807.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188575118|ref|YP_001912047.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae PXO99A] gi|123752694|sp|Q2NYU4|HEM3_XANOM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238059004|sp|B2SMV3|HEM3_XANOP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|84369375|dbj|BAE70533.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188519570|gb|ACD57515.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 304 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 4/305 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGG Sbjct: 1 MT--TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G+ DCAVHS KD+P +L + A L R D D +S+ SL+ Sbjct: 57 KGLFLKELELAMLRGDADCAVHSFKDVPMELDDPFVLPAILERGDPADALVSNLYASLQA 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L Sbjct: 177 LDERISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRAL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC +A A +G L+ G+V ++ +G+ D ++GR AQ + Sbjct: 237 HGSCHVPVAALARWEGEGLFLQGMVGSASDGRLIHADAHGSADDTEDLGRRVAQGLFDKG 296 Query: 301 NKNVF 305 + Sbjct: 297 AAQLL 301 >gi|328676207|gb|AEB27077.1| Porphobilinogen deaminase [Francisella cf. novicida Fx1] Length = 300 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 107/304 (35%), Positives = 167/304 (54%), Gaps = 5/304 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK Sbjct: 1 MKQITIASRESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKA 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 58 LFMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLP 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ Sbjct: 118 KGAVVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELV 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 178 ERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C AI +A + + +V +SDGK + G+ D +G+ AQ + + Sbjct: 238 GCHVAIGAYAELYNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAY 295 Query: 303 NVFN 306 + Sbjct: 296 KILE 299 >gi|294625631|ref|ZP_06704254.1| porphobilinogen deaminase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600054|gb|EFF44168.1| porphobilinogen deaminase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 304 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 169/305 (55%), Gaps = 4/305 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGG Sbjct: 1 MT--TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ GE DCAVHS KD+P +L + + A L R D D +S+ SL+ Sbjct: 57 KGLFLKELELAMLRGEADCAVHSLKDVPMELDEPFVLPAILERGDPADALVSNLYASLQA 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L Sbjct: 177 LEARISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRAL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC +A FA +G L+ G+V ++ +G+ D +GR AQ + Sbjct: 237 HGSCHVPVAAFARWEGQDLFLQGMVGSASDGRLIHADAHGSADDTEALGRRVAQGLFDKG 296 Query: 301 NKNVF 305 + Sbjct: 297 AAQLL 301 >gi|289664026|ref|ZP_06485607.1| porphobilinogen deaminase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 304 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 168/305 (55%), Gaps = 4/305 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGG Sbjct: 1 MT--TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ SL+ Sbjct: 57 KGLFLKELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYASLQA 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L Sbjct: 177 LDARISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRAL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC +A FA +G L+ G+V ++ +G+ D +GR AQ + Sbjct: 237 HGSCHVPVAAFARWEGEGLFLQGMVGSASDGRLIHADAHGSADDTEALGRRVAQGLFDKG 296 Query: 301 NKNVF 305 + Sbjct: 297 AAQLL 301 >gi|56707415|ref|YP_169311.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis SCHU S4] gi|110669886|ref|YP_666443.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis FSC198] gi|224456493|ref|ZP_03664966.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis MA00-2987] gi|254370888|ref|ZP_04986893.1| hydroxymethylbilane synthase [Francisella tularensis subsp. tularensis FSC033] gi|254874253|ref|ZP_05246963.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis MA00-2987] gi|61213244|sp|Q5NI31|HEM3_FRATT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123169616|sp|Q14JI3|HEM3_FRAT1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|56603907|emb|CAG44892.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella tularensis subsp. tularensis SCHU S4] gi|110320219|emb|CAL08275.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella tularensis subsp. tularensis FSC198] gi|151569131|gb|EDN34785.1| hydroxymethylbilane synthase [Francisella tularensis subsp. tularensis FSC033] gi|254840252|gb|EET18688.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis MA00-2987] gi|282158558|gb|ADA77949.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella tularensis subsp. tularensis NE061598] Length = 300 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 108/304 (35%), Positives = 167/304 (54%), Gaps = 5/304 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK Sbjct: 1 MKQITIASRESKLALWQTNFVKNRIQLELNIP---CEISTMKTQGDIILDQPLNKIGGKA 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 58 LFMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLP 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ Sbjct: 118 KGAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELV 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 178 ERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C AI +A + + +V +SDGK + G+ D +G+ AQ + + Sbjct: 238 GCHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAY 295 Query: 303 NVFN 306 + Sbjct: 296 KILE 299 >gi|23099523|ref|NP_692989.1| porphobilinogen deaminase [Oceanobacillus iheyensis HTE831] gi|39931547|sp|Q8CXC0|HEM3_OCEIH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|22777752|dbj|BAC14024.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Oceanobacillus iheyensis HTE831] Length = 309 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 168/305 (55%), Gaps = 5/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +GTR S LAL L I + TKGD+I + TL+++GGKG Sbjct: 1 MRKIIVGTRKSNLALTQTEWVIDQLKKAGVKN--EFEIKKIVTKGDQILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIEK + EID AVHS KDMP + +GL IS+ RED RD +++ L+DL Sbjct: 59 LFVKEIEKAMFDKEIDLAVHSMKDMPAVIPEGLTISSIPEREDHRDAYLAKDNILLQDLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-K 181 +++GTSSLRR A +L R D+++ RG IETR+ KL AI+LA +G+KR+ Sbjct: 119 EGAIVGTSSLRRGAQILAERPDLTIKWIRGNIETRIRKLQEEDYDAIILAVSGLKRVGLS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E++I E L E P+ GQGA+ IE+ ++ + +VK I+ T +V+ ER FL L+ Sbjct: 179 EELITEYLEPEVCVPAVGQGALAIESREDDEELTNIVKKIHDAYTAKTVSAERTFLHLLE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I G+AY G + +V DG + + G + +G++AA+ + Sbjct: 239 GGCQVPIGGYAYLDGDEVVLTALVGDPDGTTILKETVRGT--EPTEVGKEAAELLISQGA 296 Query: 302 KNVFN 306 K + + Sbjct: 297 KEIVD 301 >gi|325927040|ref|ZP_08188311.1| hydroxymethylbilane synthase [Xanthomonas perforans 91-118] gi|325542591|gb|EGD14062.1| hydroxymethylbilane synthase [Xanthomonas perforans 91-118] Length = 304 Score = 250 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 168/305 (55%), Gaps = 4/305 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGG Sbjct: 1 MT--TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ SL+ Sbjct: 57 KGLFLKELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYASLQA 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L Sbjct: 177 LEARISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRAL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC +A FA +G L+ G+V ++ +G+ D +GR AQ + Sbjct: 237 HGSCHVPVAAFARWEGQGLFLQGMVGSASDGRLIHADAHGSAEDTEALGRRVAQGLFDKG 296 Query: 301 NKNVF 305 + Sbjct: 297 AAQLL 301 >gi|294666828|ref|ZP_06732061.1| porphobilinogen deaminase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603412|gb|EFF46830.1| porphobilinogen deaminase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 304 Score = 250 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 170/305 (55%), Gaps = 4/305 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGG Sbjct: 1 MT--TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ GE DCAVHS KD+P +L + + A L R D D +S+ SL+ Sbjct: 57 KGLFLKELELAMLRGEADCAVHSLKDVPMELDEPFVLPAILERGDPADGLVSNLYASLQA 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I L+ ++ P+P QGA+ +E ++ + L+ V++ + T V ERA L Sbjct: 177 LEARISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDADRTRACVEAERAMNRAL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC +A FA +G L+ G+V ++ +G+ D +GR AQ + Sbjct: 237 HGSCHVPVAAFARWEGQDLFLQGMVGSASDGRLIHADAHGSADDTEALGRRVAQGLFDKG 296 Query: 301 NKNVF 305 + Sbjct: 297 AAQLL 301 >gi|225175616|ref|ZP_03729610.1| porphobilinogen deaminase [Dethiobacter alkaliphilus AHT 1] gi|225168945|gb|EEG77745.1| porphobilinogen deaminase [Dethiobacter alkaliphilus AHT 1] Length = 314 Score = 250 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 162/305 (53%), Gaps = 3/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK +G+R S LAL L P + + + T+GD+I + L++IG K Sbjct: 1 MKKTIVVGSRDSELALTQTHFVIGELQK--HFPDVDFTVKHIKTEGDKILDVALSKIGDK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL-KD 120 GLF +EIE L+S EID AVHS KD+PT + GLQI+ RED RD +I+ ++ D Sbjct: 59 GLFVKEIENALLSKEIDFAVHSMKDVPTAVPDGLQITTITEREDPRDCYIAKDGKTRLFD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 +VIGTSSLRR A LL RSD ++ RG + TR KL+ H I+LAYAG+ RL Sbjct: 119 TPQGAVIGTSSLRRSAQLLHQRSDFEIVPIRGNLNTRFRKLSEQDMHGIILAYAGVYRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I EI++ E P+ GQGA+ IET ++ +V +NH+ T ++ ERAFL +L Sbjct: 179 WADKITEIIDFEKSLPAVGQGALGIETRSDDDFTINIVSALNHDTTASAILAERAFLRQL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I + + L G+V DG G+ ++ +G+ AQ + Sbjct: 239 EGGCQVPIGAYGRLEAEELVLDGVVAGLDGSTVLRDQVRGSADESDALGKKLAQKMVERG 298 Query: 301 NKNVF 305 + Sbjct: 299 ADEIL 303 >gi|323699104|ref|ZP_08111016.1| porphobilinogen deaminase [Desulfovibrio sp. ND132] gi|323459036|gb|EGB14901.1| porphobilinogen deaminase [Desulfovibrio desulfuricans ND132] Length = 310 Score = 250 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 112/304 (36%), Positives = 163/304 (53%), Gaps = 2/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR S LAL A + L H P ++ ++ + TKGD+I + L ++GGKG Sbjct: 1 MKKLTIATRGSALALWQANHIKDRLEAEH--PGLSVDLLKIKTKGDKILDVPLAKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L+ G AVHS KD+PT+L GL++ RE+ D +S L L Sbjct: 59 LFVKEIEEALLDGRAQLAVHSMKDVPTELPDGLEVGIIPEREEATDSLLSVKYDGLAGLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR++ L R D+ + RG ++TRLNKL N + AI+LA AG+KRL Sbjct: 119 EGAVVGTSSLRRQSQLCALRPDLKIETLRGNLDTRLNKLLNGEYDAIVLATAGLKRLAMS 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +EIL+ +F P+ QGA+ IE + + ++L+ ++H T V ER FL LDG Sbjct: 179 APKQEILSPPEFLPAVAQGALGIEFRSADTEVRDLLAFLDHAPTKHQVLAERGFLTGLDG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IA ++ +G TL G V DG GN A ++G A + K Sbjct: 239 GCQVPIAAWSVIEGETLRLTGYVAEVDGSTPIRRMVEGNVAHAWDLGMILAGQVLEAGGK 298 Query: 303 NVFN 306 + + Sbjct: 299 AILD 302 >gi|239827917|ref|YP_002950541.1| porphobilinogen deaminase [Geobacillus sp. WCH70] gi|259647799|sp|C5D5K7|HEM3_GEOSW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|239808210|gb|ACS25275.1| porphobilinogen deaminase [Geobacillus sp. WCH70] Length = 311 Score = 250 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 172/306 (56%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P + + TKGD+I + TL+++GGKG Sbjct: 1 MRKIIVGSRRSKLALTQTNWVIERLRQLGA--PFEFEVKEIVTKGDKIIDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE +++GEID AVHS KDMP L GL I PRED DV IS ++ +L Sbjct: 59 LFVKEIEHAMLNGEIDMAVHSMKDMPAVLPDGLIIGCVPPREDHHDVLISKNKETFANLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A +L R D+ + RG I+TRL KL N AI+LA AG+ R+ Sbjct: 119 SGAIVGTSSLRRSAQILAKRPDLKIKWIRGNIDTRLAKLQNEDYDAIILAAAGLVRMGWA 178 Query: 183 K-VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + VI E L+ + P+ GQGA+ +E N+ + +E ++ +N T +V ER FL +++ Sbjct: 179 RDVITEYLSTDVCLPAVGQGALAVECRENDEELREWLQKLNDVHTERAVLAERVFLQQME 238 Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+AY + +V + DGK ++ + +G+ + +G +AA+ + Sbjct: 239 GGCQVPIAGYAYIDDREDIVLTALVASPDGKEIYKETVSGS--NPEEVGTNAAKMLIERG 296 Query: 301 NKNVFN 306 K + + Sbjct: 297 AKALID 302 >gi|218533190|ref|YP_002424006.1| porphobilinogen deaminase [Methylobacterium chloromethanicum CM4] gi|218525493|gb|ACK86078.1| porphobilinogen deaminase [Methylobacterium chloromethanicum CM4] Length = 309 Score = 250 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 124/307 (40%), Positives = 176/307 (57%), Gaps = 4/307 (1%) Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + RIGTR SP+ALA R ++ + P I+ +ST DR+ +R L+EIG Sbjct: 1 MSLSRALRIGTRGSPMALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSL 118 GKGLFT+E+E+ L + EID AVHS KD+ T L GL I+ L R+D RD F+S + A L Sbjct: 59 GKGLFTKELEQALFADEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGL 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 DL + +GTSSLRR A +L R D++++ RG TR+ KL + A LLA AG++R Sbjct: 119 ADLPPGARVGTSSLRRGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L E V + +L++E+ P+ QGA+ IE + + L+ + T +++ ER LA Sbjct: 179 LGMEDVARSVLSVEEMLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLA 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 ELDGSC++ IA A KG + G++ DG EV R G DA IGRDA ++ Sbjct: 239 ELDGSCRTPIAALAQVKGDRISLDGLLFLPDGSRHWEVHREGLAADADAIGRDAGAELKR 298 Query: 299 ISNKNVF 305 + F Sbjct: 299 AAGDVYF 305 >gi|189499889|ref|YP_001959359.1| porphobilinogen deaminase [Chlorobium phaeobacteroides BS1] gi|238058915|sp|B3EPK0|HEM3_CHLPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189495330|gb|ACE03878.1| porphobilinogen deaminase [Chlorobium phaeobacteroides BS1] Length = 313 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 122/308 (39%), Positives = 164/308 (53%), Gaps = 6/308 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK IGTR SPLAL A T++ L P I + + T GD + + L++IG Sbjct: 1 MKKKLIIGTRSSPLALWQADFTQAELSK--HFPDLEIELKLVKTTGDVLLDSPLSKIGDM 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT++IEK LISGEID AVHS KD+PT+ +GL +SA+ RED RDV IS +SLK L Sbjct: 59 GLFTKDIEKHLISGEIDLAVHSLKDVPTETPEGLMLSAFTEREDTRDVIISKNGESLKTL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + I TSSLRR + LL R D + D RG + TR K + + A++LAYAG+ RL Sbjct: 119 KQDAKIATSSLRRTSQLLSMRPDFQMGDIRGNLNTRFKKFDESDFDAMMLAYAGVHRLNF 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I EIL E P+ GQGA+ IET V++ +E+V V+N+ +T ERA L L Sbjct: 179 GDRISEILPHEVMLPAVGQGALGIETRVDDEATKEIVSVMNNVNTEFCTKAERALLRHLQ 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN----RCDAINIGRDAAQYIR 297 G C+ I +A K L+ V + DGK A G + A+ + Sbjct: 239 GGCQIPIGSYASLKNGNLHLLAYVGSVDGKRTIRNEITKENCTLPEQAEQAGIELAEELL 298 Query: 298 FISNKNVF 305 + Sbjct: 299 KQGANEIL 306 >gi|297537269|ref|YP_003673038.1| porphobilinogen deaminase [Methylotenera sp. 301] gi|297256616|gb|ADI28461.1| porphobilinogen deaminase [Methylotenera sp. 301] Length = 319 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 111/301 (36%), Positives = 165/301 (54%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R SPLA+ A +S L ++ P + I+ ++T GD+I + L ++GGKGLF Sbjct: 14 KLVIASRESPLAMWQALHIQSRLQALY--PSTIVEILGMTTTGDQILDTPLAKVGGKGLF 71 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A RED RD F+S+ SL+DL Sbjct: 72 VKELETALEDGRADLAVHSMKDVPMNLPEGFMMAATGEREDPRDAFVSNDFNSLEDLPEG 131 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S++GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+ RL Sbjct: 132 SIVGTSSLRRQSQLQARLPHLKIESLRGNLQTRLRKLDEGQYAAIILAAAGLIRLGLSAR 191 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +++ E P+ GQGA+ IE + N P ++ +NH DT V ERA L GSC Sbjct: 192 IRNVISPELSIPAVGQGALGIEINANRPDLLAVLAPLNHPDTQVCVEAERAMSRALAGSC 251 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A CKG + G V + DGK + NGNR A +G+ A + ++ Sbjct: 252 TVPLGAYATCKGEEISITGFVASVDGKQMLIETANGNRNQADALGKALANQLLAKGANDI 311 Query: 305 F 305 Sbjct: 312 L 312 >gi|254375261|ref|ZP_04990741.1| hydroxymethylbilane synthase [Francisella novicida GA99-3548] gi|151572979|gb|EDN38633.1| hydroxymethylbilane synthase [Francisella novicida GA99-3548] Length = 300 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 167/304 (54%), Gaps = 5/304 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK Sbjct: 1 MKQITIASRESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKA 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E +++ + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 58 LFMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLP 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ Sbjct: 118 KGAIVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELV 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 178 ERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C AI +A + + +V +SDGK + G+ D +G+ AQ + + Sbjct: 238 GCHVAIGAYAELYNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAY 295 Query: 303 NVFN 306 + Sbjct: 296 KILE 299 >gi|308174513|ref|YP_003921218.1| porphobilinogen deaminase [Bacillus amyloliquefaciens DSM 7] gi|307607377|emb|CBI43748.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus amyloliquefaciens DSM 7] gi|328554432|gb|AEB24924.1| porphobilinogen deaminase [Bacillus amyloliquefaciens TA208] gi|328912836|gb|AEB64432.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus amyloliquefaciens LL3] Length = 313 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 115/306 (37%), Positives = 169/306 (55%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + ++G+R S LA+ + L +++ P +N I + TKGDRI + TL+++GGKG Sbjct: 1 MRTIKVGSRRSKLAMTQTKWVINKLKELN--PSYNFEIQEIVTKGDRILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L+ EID AVHS KDMP L +GL I RED RD IS Q L D+ Sbjct: 59 LFVKEIEQALLHQEIDMAVHSMKDMPAVLPEGLVIGCIPKREDPRDALISKGHQKLDDIK 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 +IGTSSLRR A +L R D+++ RG I+TRL KL AI+LA AG+ R+ Sbjct: 119 EGGIIGTSSLRRSAQILAERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWK 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + V+ E L + P+ GQGA+ IE ++ + +L E T +V ERAFL ++ Sbjct: 179 DDVVSEFLEPDRCLPAVGQGALAIECRESDEELLKLFAQFTDEYTKRTVAAERAFLHAME 238 Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + G+V + DGK ++ + G+ D IG+ A + Sbjct: 239 GGCQVPIAGYASVNDRDEVELVGLVASPDGKTIYKETAAGH--DPEEIGKRCAAMMSEKG 296 Query: 301 NKNVFN 306 K + + Sbjct: 297 AKALID 302 >gi|319779685|ref|YP_004130598.1| Porphobilinogen deaminase [Taylorella equigenitalis MCE9] gi|317109709|gb|ADU92455.1| Porphobilinogen deaminase [Taylorella equigenitalis MCE9] Length = 313 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 167/305 (54%), Gaps = 2/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K RI TR S LA+ A + L + P N+ + ++TKGD+I ++TL++IGGK Sbjct: 4 SIKNLRIATRESRLAVWQAEFVQKKLKSI--FPHLNVELHKMTTKGDQILDKTLSKIGGK 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E L+SG D AVHS KD+P +L +I+ L RE+ D F+S+ ++ KDL Sbjct: 62 GLFIKELESSLLSGVTDLAVHSLKDVPVELNDEFEIACILERENPMDAFVSNEYKTFKDL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +++GTSSLRR++ + + V RG ++TRL KL++ + AI+LA AG+KRL Sbjct: 122 PEGAIVGTSSLRRESQIRAKFPHLVVKPLRGNLDTRLKKLDDGQYSAIILAAAGLKRLNM 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 IK ++I+D P+ GQGA+ IE + +E++ ++HE+T+ V+ ER L Sbjct: 182 MDRIKSFVSIDDSLPAVGQGALAIEILKDKFALKEMLSYLHHEETFKCVSAERIVSQYLG 241 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC+ +A A +V + DG G+ + ++ A + Sbjct: 242 GSCQVPLAAHACVINDLFQVRALVASPDGSRILRAESFGSPDEYESVATTVALNLIDQGA 301 Query: 302 KNVFN 306 + + N Sbjct: 302 REIIN 306 >gi|256828337|ref|YP_003157065.1| porphobilinogen deaminase [Desulfomicrobium baculatum DSM 4028] gi|256577513|gb|ACU88649.1| porphobilinogen deaminase [Desulfomicrobium baculatum DSM 4028] Length = 311 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 102/304 (33%), Positives = 157/304 (51%), Gaps = 2/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 RI TR S LAL A L + P + + + TKGD+I + L +IGGKG Sbjct: 1 MNTIRIATRGSKLALWQAHHISGLLRAQY--PGMTVELNIIKTKGDKILDVPLAKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L++ E D AVHS KD+P +L +GL++ RE D F+S + L Sbjct: 59 LFVKEIEEALLADEADIAVHSMKDVPAQLPEGLKLGIIPEREQPTDSFLSVNYPDIASLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR+ L+ R D+ ++ RG ++TR+ KL + AI++A AG+ RL+ Sbjct: 119 AGARVGTSSLRRQTQLMGLRRDLCILSLRGNLDTRVGKLMAGEFDAIIVATAGMNRLELS 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + L F P+ QGA+ IE + P+ EL+ ++H + V ER+FL LDG Sbjct: 179 APHMQELAPPMFYPAVAQGALGIEYRADRPQLDELLAFLDHAPSKICVEAERSFLFGLDG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ IAG+A G+ + G+V G+ A+ +G A+ + K Sbjct: 239 GCQVPIAGYATLSGTEITLTGLVADLCGERVIRRQATALSHAAVELGAQVAKAVLADGGK 298 Query: 303 NVFN 306 + + Sbjct: 299 EILD 302 >gi|229918358|ref|YP_002887004.1| porphobilinogen deaminase [Exiguobacterium sp. AT1b] gi|259647797|sp|C4L4J6|HEM3_EXISA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|229469787|gb|ACQ71559.1| porphobilinogen deaminase [Exiguobacterium sp. AT1b] Length = 305 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 98/304 (32%), Positives = 167/304 (54%), Gaps = 5/304 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LA+ L I + TKGD+I + L+++GGKG Sbjct: 1 MRKIIVGSRRSQLAMTQTKWVIEQLKQAGATN--EFEIKEIVTKGDQIVDVQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+++++ G+ID AVHS KD+P +L + L IS R D RDV I + + L Sbjct: 59 LFVKEIQQQMLDGDIDFAVHSMKDVPAELPEELYISCMPKRVDARDVLICENGYTFETLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S++GTSSLRR A +L R D+ + RG I+TRL KL++ +AILLA AG++R+ Sbjct: 119 KGSIVGTSSLRRGAQILAARPDLEIQWIRGNIDTRLKKLDSENYNAILLAKAGLERMGWT 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 ++V E L+ + P+ GQG + IE+ ++ + ++++++ + T + ER FL ++ Sbjct: 179 DRVDFEALDPDVMVPAVGQGVLAIESRKDDAEVTTVLQLLHDDVTAKAATAERTFLKAIE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC + G+A G + G++ + DGK V++ D + +G+ A+ + Sbjct: 239 GSCHVPVGGYATVNGDDVTLTGLIASVDGKEVLRVTKTST--DGVALGQAVAEELLGRGG 296 Query: 302 KNVF 305 + + Sbjct: 297 REIL 300 >gi|242060648|ref|XP_002451613.1| hypothetical protein SORBIDRAFT_04g004630 [Sorghum bicolor] gi|241931444|gb|EES04589.1| hypothetical protein SORBIDRAFT_04g004630 [Sorghum bicolor] Length = 356 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 130/306 (42%), Positives = 182/306 (59%), Gaps = 5/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGL Sbjct: 48 IRIGTRGSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGL 107 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L Sbjct: 108 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPA 167 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+G++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RL + Sbjct: 168 GSVVGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLNMAE 227 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+ Sbjct: 228 NATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVACEREFLAVLDGN 287 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFIS 300 C++ IA +AY F G++ + DG E +R+G D + +G+DA ++ + Sbjct: 288 CRTPIAAYAYRDKDGNCSFRGLLASPDGSKVFETTRSGPYSFDDMVELGKDAGHELKAKA 347 Query: 301 NKNVFN 306 F+ Sbjct: 348 GPGFFD 353 >gi|134302637|ref|YP_001122606.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis WY96-3418] gi|158513860|sp|A4IZY4|HEM3_FRATW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|134050414|gb|ABO47485.1| porphobilinogen deaminase [Francisella tularensis subsp. tularensis WY96-3418] Length = 300 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 108/304 (35%), Positives = 167/304 (54%), Gaps = 5/304 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK Sbjct: 1 MKQITIASRESKLALWQTNFIKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKA 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 58 LFMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLP 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ Sbjct: 118 KGAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELV 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 178 ERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C AI +A + + +V +SDGK + G+ D +G+ AQ + + Sbjct: 238 GCHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAY 295 Query: 303 NVFN 306 + Sbjct: 296 KILE 299 >gi|159900065|ref|YP_001546312.1| porphobilinogen deaminase [Herpetosiphon aurantiacus ATCC 23779] gi|159893104|gb|ABX06184.1| porphobilinogen deaminase [Herpetosiphon aurantiacus ATCC 23779] Length = 300 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 163/303 (53%), Gaps = 3/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 IGTR S LAL R +L+ H P I + ++TKGD I +R L IG KG Sbjct: 1 MNILTIGTRKSQLALVQTHAMRDALLAAH--PQLTIELEHITTKGDAILDRPLAAIGDKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF EIE + +G++D AVHSAKD+P+ L + I+AY R D RDV + + L DL Sbjct: 59 LFVSEIEDAMRNGKVDLAVHSAKDLPSILAPDMTIAAYPERADPRDVLVGAEGRRLADLV 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSS RR A L R D+++ID RG ++TRL KL+ + AI+LA AG++RL Sbjct: 119 PGAKVGTSSPRRAAQLRHLRPDLTIIDIRGNVDTRLRKLDEGQYDAIVLAAAGLQRLGLL 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 K + + + P+ QG + IE + + +L+KV++H ++ + E+AFLA + G Sbjct: 179 KRVTQFFEPAEMTPAVSQGILGIEARAGDQRVADLLKVLDHAESRATAEAEKAFLATIGG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ A+ FA + L+ G++ A DG G+ A +G AQ + + Sbjct: 239 GCQVAVGAFATYQIGQLHLIGMIGALDG-RLVRGELTGSASTAQALGTSLAQQLLAQGGR 297 Query: 303 NVF 305 + Sbjct: 298 ELL 300 >gi|319789486|ref|YP_004151119.1| porphobilinogen deaminase [Thermovibrio ammonificans HB-1] gi|317113988|gb|ADU96478.1| porphobilinogen deaminase [Thermovibrio ammonificans HB-1] Length = 311 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 108/306 (35%), Positives = 170/306 (55%), Gaps = 6/306 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL + ++ + K P + ++ ++TKGD+I + L +IG KGLF Sbjct: 2 KIRIGTRKSKLALWQSEWVKAQIEK--KFPDVEVELVKITTKGDKILDVPLAKIGDKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+EIE+ ++ GE+D AVHS KD+P+KL KGL++ A+ RED RD +S +L+ L Sbjct: 60 TKEIEEAMLRGEVDIAVHSLKDVPSKLPKGLKLIAFSDREDPRDALLSCGRYTLETLPEG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRRKA L R D+ + D RG ++TR+ KL + AI+LA AG+KRL E+ Sbjct: 120 AVVGTSSLRRKAQLRILRPDLQIKDLRGNVDTRIRKLKEGQYDAIILAAAGVKRLGWEEE 179 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT-WDSVNCERAFLAELDGS 243 I EIL+ E PS QG + IE + + + +V+ + + ERAFL ++G Sbjct: 180 IDEILSPERMIPSVCQGILGIEGREGDSEVERIVREAVNSYESEVAATVERAFLRTVEGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIRFIS 300 C+ + +A + + +G+ +H+ + +A +IG A+ + Sbjct: 240 CQVPLGCYAVVNEDRILVRAFISDLNGRFYHKEEGVFRFKDLREADSIGVAVAERLLSAG 299 Query: 301 NKNVFN 306 K + Sbjct: 300 GKTILE 305 >gi|78046235|ref|YP_362410.1| porphobilinogen deaminase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123771497|sp|Q3BXV3|HEM3_XANC5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78034665|emb|CAJ22310.1| hydroxymethylbilane synthase HemC [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 304 Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 168/305 (55%), Gaps = 4/305 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGG Sbjct: 1 MT--TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEMLDRSLAAIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ SL+ Sbjct: 57 KGLFLKELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYASLQA 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L Sbjct: 177 LEARISARLDAPEWLPAPAQGAVAVECRGDDARIYSLLAVLDAGRTRACVEAERAMNRAL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC +A FA +G L+ G+V ++ +G+ D +GR AQ + Sbjct: 237 HGSCHVPVAAFARWEGQGLFLQGMVGSASDGRLIHADAHGSAEDTEALGRRVAQGLFDKG 296 Query: 301 NKNVF 305 + Sbjct: 297 AAQLL 301 >gi|83594897|ref|YP_428649.1| porphobilinogen deaminase [Rhodospirillum rubrum ATCC 11170] gi|83577811|gb|ABC24362.1| Porphobilinogen deaminase [Rhodospirillum rubrum ATCC 11170] Length = 321 Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 126/311 (40%), Positives = 175/311 (56%), Gaps = 7/311 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIG 59 EK RIGTR SPLALA + R L+ + + I + T GD I +R L+E+G Sbjct: 6 EKSKLRIGTRGSPLALAQTHQVRDLLIAANPDLGEPGAVTIEVIKTTGDAILDRPLSELG 65 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLFT EI+ +++G ID AVHS KD+PT L G+ + L RED+RD F+ L Sbjct: 66 GKGLFTREIDDAMLAGTIDIAVHSMKDVPTYLPDGIVLPCMLEREDVRDAFLGRDHARLA 125 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL SV+GT+SLRR A +L R DI VI FRG ++TRL+KL +A A +LA AG+ RL Sbjct: 126 DLPEGSVVGTASLRRGAQILAMRPDIKVISFRGNVQTRLDKLARGEADATMLAIAGLNRL 185 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 +L I++ P+ QGA+ + + A + +NH T V ERAFL Sbjct: 186 GMADKASSVLEIDEMLPAVAQGAVGVTCRAGDETAHRWLAPLNHRATQLCVEIERAFLTR 245 Query: 240 LDGSCKSAIAGFAYCK-----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 LDGSC++ I G A K T++F G+++ +DGK+ H+ +R G D I +G DA Sbjct: 246 LDGSCRTPIGGLARLKRVEDPSGTVFFRGMIIRTDGKVIHQTTREGLAADGIALGDDAGA 305 Query: 295 YIRFISNKNVF 305 + + F Sbjct: 306 ELLAKAGPGFF 316 >gi|311069308|ref|YP_003974231.1| porphobilinogen deaminase [Bacillus atrophaeus 1942] gi|310869825|gb|ADP33300.1| porphobilinogen deaminase [Bacillus atrophaeus 1942] Length = 313 Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 116/306 (37%), Positives = 164/306 (53%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + ++G+R S LA+ L ++ P + I + TKGDRI + TL+++GGKG Sbjct: 1 MRTIKVGSRRSKLAMTQTKWVIKKLEEI--DPSYTFEIKEIVTKGDRILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L++ +ID AVHS KDMP L +GL I RED RD IS Q L D+ Sbjct: 59 LFVKEIEQALLNEDIDMAVHSMKDMPASLPEGLTIGCIPKREDPRDALISKRHQKLSDIK 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 VIGTSSLRR A LL R D+++ RG I+TRL+KL AI+LA AG+ R+ Sbjct: 119 EGGVIGTSSLRRSAQLLVERPDLTIKWIRGNIDTRLHKLETEDYDAIILAAAGLSRMGWK 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++ Sbjct: 179 DDVVTEFLEPERCLPAVGQGALAIECRESDEELLRLFSQFTDEYTKRTVLAERAFLNAME 238 Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + G+V + DGK + G D IG+ A + Sbjct: 239 GGCQVPIAGYATINDQDEVQLTGLVASPDGKTIFKEKVAG--NDPEEIGKRCAALMSDKG 296 Query: 301 NKNVFN 306 K + + Sbjct: 297 AKALID 302 >gi|224008054|ref|XP_002292986.1| porphobilinogen deaminase [Thalassiosira pseudonana CCMP1335] gi|220971112|gb|EED89447.1| porphobilinogen deaminase [Thalassiosira pseudonana CCMP1335] Length = 330 Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 123/306 (40%), Positives = 181/306 (59%), Gaps = 4/306 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKG 62 P RIGTR SPLALA A+ETR L++ I I + T+GD I +++L E+GGKG Sbjct: 9 PLRIGTRGSPLALAQAYETRRRLIENFPELEAEGAIEICVMKTQGDMILDKSLMELGGKG 68 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI--SHTAQSLKD 120 LFT+E++ L+ E+D VHS KD+PT L +G + LPRED D FI + + + D Sbjct: 69 LFTKELDTALLGDEVDICVHSMKDVPTWLPEGTVLPCNLPREDTNDAFITANGDIKRIAD 128 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +SVIGT+SLRR+A +L + ++FRG ++TRL KL++ A LLA AG+KR+ Sbjct: 129 LPDNSVIGTASLRRQAQILAQNPTLKCVNFRGNVQTRLRKLDDGVVDATLLAIAGLKRMD 188 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + IL ++ P+ QGAI I+ ++ ++ + + +N DT VNCERAFL L Sbjct: 189 MDDCATAILEWDEMLPAVAQGAIGIQCRSDDTRSLKYIDALNCMDTHVCVNCERAFLEAL 248 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DG+CK+ IAG A + F G++ DG + +E G DA+ IGR A + ++ + Sbjct: 249 DGNCKTPIAGQARIVDGKIVFKGLIAMPDGSLKYETEATGEIADAVEIGRKAGEELKAQA 308 Query: 301 NKNVFN 306 + F Sbjct: 309 GEKFFE 314 >gi|159486921|ref|XP_001701485.1| porphobilinogen deaminase [Chlamydomonas reinhardtii] gi|158271667|gb|EDO97482.1| porphobilinogen deaminase [Chlamydomonas reinhardtii] Length = 349 Score = 249 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 132/310 (42%), Positives = 189/310 (60%), Gaps = 5/310 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGG 60 K +IGTR SPLALA A+ TR L + I+ + T GD+I N+ L +IGG Sbjct: 40 TKTVKIGTRGSPLALAQAYMTRDLLKKSFPELSEEGALEIVIIKTTGDKILNQPLADIGG 99 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EI+ L+SG+ID AVHS KD+PT L +G + LPRED+RDVFIS A+ L + Sbjct: 100 KGLFTKEIDDALLSGKIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDVFISPVAKDLSE 159 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++G++SLRR+A +L + V +FRG ++TRL KLN A LLA AG+KRL Sbjct: 160 LPAGAIVGSASLRRQAQILAKYPHLKVENFRGNVQTRLRKLNEGACSATLLALAGLKRLD 219 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I + L+I++ P+ QGAI I ++ ++ L+ +NHE+T +V CERAFL L Sbjct: 220 MTEHITKTLSIDEMLPAVSQGAIGIACRTDDGASRNLLAALNHEETRIAVVCERAFLTAL 279 Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIR 297 DGSC++ IAG+A+ L+F G+V DGK SR DA+ G +A + ++ Sbjct: 280 DGSCRTPIAGYAHKGADGMLHFSGLVATPDGKQIMRASRVVPFTEADAVKCGEEAGKELK 339 Query: 298 FISNKNVFNF 307 K +F + Sbjct: 340 ANGPKELFMY 349 >gi|169831506|ref|YP_001717488.1| porphobilinogen deaminase [Candidatus Desulforudis audaxviator MP104C] gi|238058920|sp|B1I4L8|HEM3_DESAP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|169638350|gb|ACA59856.1| porphobilinogen deaminase [Candidatus Desulforudis audaxviator MP104C] Length = 309 Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats. Identities = 106/304 (34%), Positives = 158/304 (51%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++ +GTR S LALA A L + P + V + T GD I L +IG K Sbjct: 1 MRREVVVGTRGSRLALAQADWVIDHLRARY--PRVSFVRKEIRTTGDNILEVALAKIGDK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT+E+E+ L+ EID AVHS KD+PT L +GL I A RE DVFIS + L++L Sbjct: 59 GLFTKELEQALLHREIDLAVHSMKDLPTGLPEGLVIGAVSVREYPGDVFISRGGERLEEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSSLRR A LL +R D+ VI RG ++TRL KL+ A++LA+AG+ RL Sbjct: 119 PAGAVLGTSSLRRTAQLLAYRPDLQVIPVRGNVQTRLRKLDEGVVDALVLAWAGLFRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + + + P+ GQGA+ IE ++ + E+++ I+H T +V ER L L+ Sbjct: 179 TERVTHRIPVAMCLPAVGQGALGIEARADDAEILEMLRTIDHAPTRAAVQAERTLLRRLE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ + + L +V + DG +G +G A + + Sbjct: 239 GGCQVPVGALGRFRDGRLVLEAVVASLDGTELVRAQESGPADRPEALGNSLAVRLLEMGA 298 Query: 302 KNVF 305 + Sbjct: 299 GEIL 302 >gi|259417591|ref|ZP_05741510.1| porphobilinogen deaminase [Silicibacter sp. TrichCH4B] gi|259346497|gb|EEW58311.1| porphobilinogen deaminase [Silicibacter sp. TrichCH4B] Length = 318 Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats. Identities = 133/306 (43%), Positives = 182/306 (59%), Gaps = 5/306 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A+ETR L ++ P I+ + T GD +R L EIG Sbjct: 11 PLKIGTRGSPLALAQAYETRDRLARAFELEPTAFDIVVIKTTGDNRAMIDADRPLKEIGN 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L SG ID AVHS KDMPT+ +GL + YLPRED+RD F+S +++ D Sbjct: 71 KGLFTKEIEEALTSGGIDLAVHSMKDMPTEQPEGLMLDCYLPREDVRDAFVSPQIRAIAD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL + A A LA AG++RL Sbjct: 131 LPEGAVVGTSSLRRRAQLLHRRPDLQVVEFRGNVQTRLQKLQDGVASATFLAMAGLRRLN 190 Query: 181 K-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E+V + ED P+ QGAI IE ++ A +++ I+H +T + ERAFLA Sbjct: 191 MAEEVPATPIAPEDMLPAVAQGAIGIERRSDDTTAAAMLEAIHHAETSLRLAAERAFLAA 250 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 LDGSC++ IA A G TL G +L DG ++ D +GR + +R Sbjct: 251 LDGSCETPIAALADLSGGTLQLRGQILRPDGSEALADQQSCAIEDGAELGRRMGEALRAR 310 Query: 300 SNKNVF 305 + + F Sbjct: 311 AGEGFF 316 >gi|291612739|ref|YP_003522896.1| porphobilinogen deaminase [Sideroxydans lithotrophicus ES-1] gi|291582851|gb|ADE10509.1| porphobilinogen deaminase [Sideroxydans lithotrophicus ES-1] Length = 314 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 105/300 (35%), Positives = 162/300 (54%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A R L ++ P ++ I+ ++T+GD+I + TL++IGGKGLF Sbjct: 12 LVIASRESALAMWQAEHIRDRLRALY--PQTSVSILGMTTQGDQILDVTLSKIGGKGLFV 69 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L +G D AVHS KD+P L +G ++ RED RD F+S+ +L L S Sbjct: 70 KELETALENGSADIAVHSLKDVPMNLPEGFALACIGEREDPRDAFVSNRFDNLAALPAGS 129 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+KRL + I Sbjct: 130 VVGTSSLRRESQLRARFPHLKIEPLRGNVQTRLRKLDEGQYAAIILAAAGLKRLGLGERI 189 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + +++ ++ P+ GQGA+ IET + P + ++ ++H DT V ERA L GSC+ Sbjct: 190 RAVISSDESLPAVGQGALGIETRADRPDLKAVLAPLHHADTAACVLAERAMSRALAGSCQ 249 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + GFA + L G V DG G+ +G AQ + + Sbjct: 250 VPLGGFAEVQNGKLRMRGFVATPDGTRLLRAEHVGDIAQPEALGDLVAQDLLRQGAGEIL 309 >gi|325922553|ref|ZP_08184310.1| hydroxymethylbilane synthase [Xanthomonas gardneri ATCC 19865] gi|325546966|gb|EGD18063.1| hydroxymethylbilane synthase [Xanthomonas gardneri ATCC 19865] Length = 304 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 169/305 (55%), Gaps = 4/305 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGG Sbjct: 1 MT--TLRIATRKSPLALWQSEHVATALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ GE DCAVHS KD+P +L + A + R D D +S+ +++ Sbjct: 57 KGLFLKELELAMLRGEADCAVHSLKDVPMELDAPFVLPAIMERGDAADALVSNLYATVQA 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I L++ ++ P+P QGA+ +E ++ L+ V++ T V ERA L Sbjct: 177 FDARITARLDVPEWLPAPAQGAVAVECRGDDAHIHGLLAVLDAGRTRACVEAERAMNRAL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC +A FA +G L+ G+V ++ +G+ D ++GR AQ + Sbjct: 237 HGSCHVPVAAFARWEGDGLFLQGMVGSASDGRLIHAEAHGSAEDTESLGRLVAQGLFDKG 296 Query: 301 NKNVF 305 + Sbjct: 297 AAQLL 301 >gi|217964297|ref|YP_002349975.1| porphobilinogen deaminase [Listeria monocytogenes HCC23] gi|290893957|ref|ZP_06556933.1| porphobilinogen deaminase [Listeria monocytogenes FSL J2-071] gi|254800254|sp|B8DHJ2|HEM3_LISMH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|217333567|gb|ACK39361.1| porphobilinogen deaminase [Listeria monocytogenes HCC23] gi|290556495|gb|EFD90033.1| porphobilinogen deaminase [Listeria monocytogenes FSL J2-071] gi|307571137|emb|CAR84316.1| hemC [Listeria monocytogenes L99] Length = 309 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 114/307 (37%), Positives = 168/307 (54%), Gaps = 7/307 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK Sbjct: 1 MKRKIIVGSRRSKLALTQSNWVINKLKENY--PAFDFEIKEIVTKGDRILDVTLSKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + +L +L Sbjct: 59 GLFVSEVEQALSDKTIDFAVHSMKDVPSSLKEGLVIGAIPKRESPLDCFVFNQVNALDEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 119 PHGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL Sbjct: 179 LENTTLKLEDIPPELCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLK 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +L+G C+ IAGFA ++F G+V +DG I E + G + IG A+ + Sbjct: 239 KLNGGCEIPIAGFATKANEAVHFKGLVGNADGSIILEAEQTG--ANPSEIGNKVAEDLLS 296 Query: 299 ISNKNVF 305 + Sbjct: 297 KGADTII 303 >gi|115378196|ref|ZP_01465368.1| porphobilinogen deaminase [Stigmatella aurantiaca DW4/3-1] gi|310820650|ref|YP_003953008.1| porphobilinogen deaminase [Stigmatella aurantiaca DW4/3-1] gi|115364784|gb|EAU63847.1| porphobilinogen deaminase [Stigmatella aurantiaca DW4/3-1] gi|309393722|gb|ADO71181.1| Porphobilinogen deaminase [Stigmatella aurantiaca DW4/3-1] Length = 314 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 163/305 (53%), Gaps = 3/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLAL A + L H P ++ ++ ++T+GDR + L+ +GG Sbjct: 1 MS-RLVRIATRQSPLALWQARHVGALLTAQH--PGLSVSLVEMTTEGDRFLSAPLSSVGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L+ G D AVHS KDM + L +GL ++A RED RD F S T +L Sbjct: 58 KGLFVKEIEQALLDGRADIAVHSLKDMTSVLPEGLMLAAVPVREDPRDAFCSPTGLTLDR 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR +L WR D+ ++ RG ++TRL K + +LA+AG+KRL Sbjct: 118 LPQGARVGTSSLRRSCILRSWRKDLEIVSLRGNVQTRLQKTRDLGLAGTVLAHAGLKRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I E+L+ P+ GQG + I+ + + + L+ + T +V ERA LA+L Sbjct: 178 LEREISEVLSPSVSLPAVGQGVLAIQCRTEDAEVRALLGPLEDAVTRVAVTAERALLAKL 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G CK +AG A + ++ G V DG G +A +G A+ + Sbjct: 238 EGGCKVPLAGHATVEQGRVHLRGFVGRPDGTQVVAGEVRGTAKEAQALGEALAEDLLSRG 297 Query: 301 NKNVF 305 + Sbjct: 298 AGEIL 302 >gi|319785862|ref|YP_004145337.1| porphobilinogen deaminase [Pseudoxanthomonas suwonensis 11-1] gi|317464374|gb|ADV26106.1| porphobilinogen deaminase [Pseudoxanthomonas suwonensis 11-1] Length = 301 Score = 248 bits (633), Expect = 7e-64, Method: Composition-based stats. Identities = 108/302 (35%), Positives = 154/302 (50%), Gaps = 4/302 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL + + L H P +V++PLST+GD + +R+L IGGKGLF Sbjct: 3 TLRIATRKSPLALWQSEHVAARLRAAH--PGLEVVLVPLSTRGDEVLDRSLAAIGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E + GE DCAVHS KD+P +L G + A L R D D F+S+ L L Sbjct: 61 LKELEIAMERGEADCAVHSLKDVPMELEPGFVLPAVLERADPADAFVSNDFADLDALPQG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A L R D+ + D RG + TRL KL+ + HAI+LA AG++RL + Sbjct: 121 AVVGTSSLRRQAQLRARRPDLQLRDLRGNVNTRLAKLDAGEYHAIILACAGLQRLGLDAR 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ L + P+P Q + E + + L+ ++ H T + ERA L GSC Sbjct: 181 IRARLVPPQWLPAPAQAVVACECRAGDERTIGLLSLLEHAPTRAVIEAERALNRGLHGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLA-SDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 +A +A TL +V + +DG G D +G A + Sbjct: 241 HVPVAAYAELHDRTLRLQALVGSAADG-RAVRAEGEGPAADPQTLGSRLAAELLERGAGE 299 Query: 304 VF 305 Sbjct: 300 FL 301 >gi|258545718|ref|ZP_05705952.1| hydroxymethylbilane synthase [Cardiobacterium hominis ATCC 15826] gi|258519035|gb|EEV87894.1| hydroxymethylbilane synthase [Cardiobacterium hominis ATCC 15826] Length = 310 Score = 248 bits (633), Expect = 7e-64, Method: Composition-based stats. Identities = 106/300 (35%), Positives = 161/300 (53%), Gaps = 3/300 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LAL A + L + P + ++P++T+GD+I + L IGGKGLF Sbjct: 8 IRIATRESKLALWQAEHVAARLRAHY--PHLAVRLVPMTTRGDQILDAPLARIGGKGLFI 65 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ + GE D AVHS KD+ L +G +I+A LPRE+ D F+S+ SL +L + Sbjct: 66 KELEQAMARGEADIAVHSMKDVGVHLPEGFRIAAILPRENPHDAFVSNHYASLAELPPGA 125 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT SLRR+ L R R D+ ++D RG ++TRL+KL+ AI+LA AG+ RL + I Sbjct: 126 RVGTCSLRRRMQLARLRPDLKLLDLRGNVQTRLDKLDRGDFDAIVLACAGLIRLGLQARI 185 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E P+ GQGAI IE L+ ++ DT V+ ER L+GSC+ Sbjct: 186 RAELPPEQSLPAIGQGAIGIEC-HETSAVYPLLAALDDADTALCVHTERIINTHLEGSCQ 244 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A A G ++ + DG + + + R DA +G A + +++ Sbjct: 245 VPLAAHAALHGERIHLAARIGMPDGSRYLSAADDAPRRDAEALGNHIAARLIADGARDIL 304 >gi|85858418|ref|YP_460620.1| porphobilinogen deaminase [Syntrophus aciditrophicus SB] gi|123738772|sp|Q2LQU2|HEM3_SYNAS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|85721509|gb|ABC76452.1| porphobilinogen deaminase [Syntrophus aciditrophicus SB] Length = 306 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 100/301 (33%), Positives = 161/301 (53%), Gaps = 2/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LAL + + L + P ++ I+ + T GD + L +IGGKGLF Sbjct: 1 MKIGTRGSALALTQTRQIAARLQ--GQYPEMHLEIVVIKTSGDIQKDVPLAKIGGKGLFI 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L++G +D AVHS KD+P +L +GLQI+A RED RDV IS + +L + Sbjct: 59 KEIEEALLAGTVDLAVHSMKDLPAELPEGLQIAAVPRREDPRDVLISGICREFDNLPAGA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGT SLRR L WR D+ ++ RG ++TR+ K+ +++A AGI+R+ + + Sbjct: 119 RIGTGSLRRSVQLRDWRPDLEIVPLRGNLDTRIRKVAQAALDGVVVAAAGIRRMGWAEKV 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + E P+ GQG +C+ET + + + + + T V ERAFL L G C Sbjct: 179 TQFIPTEKMLPAVGQGVLCLETREEDEDLKAGLAFLEDKRTRREVTAERAFLRRLGGGCT 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A FA +G L G+V + + + G+ A+++G + A+ + + + Sbjct: 239 LPVAAFAEQRGDVLTIRGMVGSLNERTMIRQEIYGSVEQAVDLGTELAERLLDGGGRILL 298 Query: 306 N 306 Sbjct: 299 E 299 >gi|94311681|ref|YP_584891.1| porphobilinogen deaminase [Cupriavidus metallidurans CH34] gi|93355533|gb|ABF09622.1| hydroxymethylbilane synthase [Cupriavidus metallidurans CH34] Length = 334 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 163/304 (53%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R++L + P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 21 KLVIASRESRLAMWQAEHVRAALQQYY--PSCDVSILGMTTRGDQILDRTLSKVGGKGLF 78 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E + G D AVHS KD+P +L +G ++A + RED RD +S SL+++ Sbjct: 79 VKELEVAMSEGRADLAVHSLKDVPMELPEGFTLTAVMEREDPRDALVSAQFASLEEMPAG 138 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A L + + RG ++TRL KL+ + AI+LA AG+KRL Sbjct: 139 TVVGTSSLRREAALRSRFPHLVIKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGDR 198 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ ++ E P+ GQGA+ IE + P+ E + +NH T +V+ ERA L GSC Sbjct: 199 IRALIAPESSLPAAGQGALGIEIRADRPELAEWLAPLNHLPTLLAVSAERAVSRRLGGSC 258 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301 + +A A + ++L V DG G DA +G A + Sbjct: 259 QVPLAAHARWRDASLQLDAFVALPDGSRQVRAHATGPVATVADAEALGTAVAGDLLAQGA 318 Query: 302 KNVF 305 V Sbjct: 319 DGVL 322 >gi|167463591|ref|ZP_02328680.1| porphobilinogen deaminase [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383221|ref|ZP_08057032.1| porphobilinogen deaminase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152490|gb|EFX45276.1| porphobilinogen deaminase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 314 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 115/310 (37%), Positives = 167/310 (53%), Gaps = 9/310 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGG 60 + +GTR S LAL + L + I + TKGDRI + TL+++GG Sbjct: 1 MRKIVVGTRQSALALTQTGQVVDELRKRCREAGLQVEFEIRKIVTKGDRILDVTLSKVGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ +++GEID AVHS KDMP +L +GL I A R+D RD ++ SL + Sbjct: 61 KGLFVKEIEQAMLNGEIDLAVHSMKDMPFELPEGLVIGAIPERQDPRDCILTKGYVSLDE 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR + LL R D+++ RG I++RL KL + AI+LA AG+ R+ Sbjct: 121 LPQGALVGTSSLRRGSQLLHARPDLTIRSVRGNIDSRLRKLESEGFDAIVLASAGLHRMG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ I L E P+ GQGA+CIE + +L+K+I H+DT +V ERAFL L Sbjct: 181 WEERISGYLPPEQCLPAVGQGALCIECRGGDAFVLDLLKLIQHDDTALAVRAERAFLGRL 240 Query: 241 DGSCKSAIAGFAYCK--GST---LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 +G C+ + FA G T L +V + DG + +R G R +G A Sbjct: 241 NGGCQVPLGAFASVDHSGGTEPLLTLTAMVGSPDGSKLLKETRQGTR--PEELGLQLADA 298 Query: 296 IRFISNKNVF 305 + + Sbjct: 299 LIGRGADRIL 308 >gi|99082369|ref|YP_614523.1| porphobilinogen deaminase [Ruegeria sp. TM1040] gi|99038649|gb|ABF65261.1| porphobilinogen deaminase [Ruegeria sp. TM1040] Length = 318 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 133/306 (43%), Positives = 181/306 (59%), Gaps = 5/306 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A+ETR L ++ P I+ + T GD +R L EIG Sbjct: 11 PLKIGTRGSPLALAQAYETRDRLARAFELEPTAFDIVVIKTTGDNRAMIDADRPLKEIGN 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ L+SG ID AVHS KDMPT +GL + YLPRED+RD F+S S+ D Sbjct: 71 KGLFTKEIEEALLSGGIDIAVHSMKDMPTLQPEGLTLDCYLPREDVRDAFVSPGIHSIAD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR+A LL R D+ V++FRG ++TRL KL N A A LA AG++RL Sbjct: 131 LPEGAVVGTSSLRRRAQLLHRRPDLQVVEFRGNVQTRLQKLENGVASATFLAMAGLRRLD 190 Query: 181 K-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E V ++++D P+ QGAI IE ++ +++ I+H +T + ERAFLA Sbjct: 191 MAEAVPATPISVDDMLPAVAQGAIGIERRSSDITTAAMLEAIHHAETSLRLAAERAFLAA 250 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 LDGSC++ IA A G T+ G +L DG ++G D +GR + +R Sbjct: 251 LDGSCETPIAALADLSGGTIQLRGQILRPDGSEALSDEQDGAIEDGAELGRQMGETLRAR 310 Query: 300 SNKNVF 305 + F Sbjct: 311 AGAGFF 316 >gi|146329177|ref|YP_001209219.1| porphobilinogen deaminase [Dichelobacter nodosus VCS1703A] gi|158513296|sp|A5EW83|HEM3_DICNV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|146232647|gb|ABQ13625.1| porphobilinogen deaminase [Dichelobacter nodosus VCS1703A] Length = 305 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 103/305 (33%), Positives = 156/305 (51%), Gaps = 5/305 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A L + P + ++P+ T+GD + + L++IGG Sbjct: 1 MS--TLRIATRKSPLALWQAEHVAQQLKQHY--PELTVELVPIVTQGDILAHTPLSKIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K LF +E+E + D AVHS KD+ L +G ++A LPRE+ D +S+ L + Sbjct: 57 KNLFIKELEIAMQQNAADIAVHSMKDVGVTLPEGFVLAAILPRENPFDALVSNHYAHLNE 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT SLRRK L +R D+ +ID RG + TRL KL++ A++LA AG+ RL+ Sbjct: 117 LPNGARVGTCSLRRKMQLAHYRPDLKLIDIRGNVHTRLQKLDSGAFDALILACAGLIRLQ 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I++IL E P+ GQGAI +E ++P ++ +NH +T V ER L Sbjct: 177 QNARIRQILPAEISLPAIGQGAIGVECRADSPFL-AHIQTLNHFETAVCVQTERVVNQRL 235 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IA FA G T+ + DG+ DA G A+ + Sbjct: 236 QGDCQVPIAVFATLSGKTMTLQSRIGTIDGQRMLAHQEICALEDAEKAGARCAEALIQQG 295 Query: 301 NKNVF 305 +++ Sbjct: 296 AQDIL 300 >gi|241667490|ref|ZP_04755068.1| porphobilinogen deaminase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876036|ref|ZP_05248746.1| porphobilinogen deaminase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842057|gb|EET20471.1| porphobilinogen deaminase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 300 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 102/304 (33%), Positives = 168/304 (55%), Gaps = 5/304 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I +R S LAL + + I + T+GD I ++ L +IGGK Sbjct: 1 MKQIVIASRESKLALWQTNYVKDRIQQELN---IRCQINTMKTQGDIILDKPLNKIGGKA 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E +++ + D AVHS KD+P +L +G +++++PRED RD F+S+ S+ DL Sbjct: 58 LFMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLASFMPREDPRDAFVSNKYSSIDDLP 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ Sbjct: 118 RGAIVGTSSLRRKAQLLHYRGDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELN 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I + + +E P+ GQG + IE + + + ++ +N D++ ERAF EL G Sbjct: 178 ERITQFIPVEISLPAVGQGIVVIEALDKSSEILQKLQKLNCSDSFCVATAERAFNQELKG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C AI +A + + +V +SDGK + G+ + + +G+ AQ + + Sbjct: 238 GCHVAIGAYAELHDNQITLTAMVASSDGKNILKRKLIGD--NPMRLGKLLAQEMIELGAY 295 Query: 303 NVFN 306 + Sbjct: 296 KILE 299 >gi|315303323|ref|ZP_07873952.1| porphobilinogen deaminase [Listeria ivanovii FSL F6-596] gi|313628303|gb|EFR96807.1| porphobilinogen deaminase [Listeria ivanovii FSL F6-596] Length = 309 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 116/307 (37%), Positives = 170/307 (55%), Gaps = 7/307 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK Sbjct: 1 MKRKIIVGSRRSKLALTQSGWVIARLKENY--PSIDFEIKEIVTKGDRILDVTLSKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF E+E+ L G ID AVHS KD+P+ L +GL I A RE D F+ +T + KDL Sbjct: 59 GLFVSEVEQALSDGLIDFAVHSMKDVPSSLKEGLTIGAIPKRESALDCFVFNTVATFKDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +VIGTSSLRR A +LR R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 119 PKGAVIGTSSLRRAAQILRKRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E + E P+ GQGA+ IE ++ + +++ I+HE+T V ER FL Sbjct: 179 LENTTLKLEDIPPELCLPAVGQGALAIECRESDQQICDMLASIHHEETGACVEAERIFLK 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +L+G C+ IAGFA T++F G+V SDG ++G + IG A+ + Sbjct: 239 KLNGGCEIPIAGFATKTDGTVHFKGLVGNSDGTTILSAEQSGK--NPETIGNQVAESLLS 296 Query: 299 ISNKNVF 305 ++ Sbjct: 297 EGAASII 303 >gi|325918388|ref|ZP_08180519.1| hydroxymethylbilane synthase [Xanthomonas vesicatoria ATCC 35937] gi|325535411|gb|EGD07276.1| hydroxymethylbilane synthase [Xanthomonas vesicatoria ATCC 35937] Length = 304 Score = 248 bits (632), Expect = 9e-64, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 168/305 (55%), Gaps = 4/305 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGG Sbjct: 1 MT--TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ SL+ Sbjct: 57 KGLFLKELELAMLRGEADCAVHSLKDVPMELDDPFVLPAILGRGDAADALVSNLYASLQA 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I L+ D+ P+P QGA+ +E ++ + L+ V++ T V ERA L Sbjct: 177 LDARISARLDAPDWLPAPAQGAVAVECRGDDARIHALLAVLDAPTTRVCVEAERAMNRAL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC +A FA +G LY G+V ++ +G+ D +GR AQ + Sbjct: 237 HGSCHVPVAAFATWEGEGLYLQGMVGSASDGRLIHADAHGSAGDTEELGRRVAQGLFDKG 296 Query: 301 NKNVF 305 + Sbjct: 297 AAQLL 301 >gi|188990080|ref|YP_001902090.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris str. B100] gi|229846307|sp|B0RNI9|HEM3_XANCB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|167731840|emb|CAP50024.1| hydroxymethylbilane synthase [Xanthomonas campestris pv. campestris] Length = 304 Score = 248 bits (632), Expect = 9e-64, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 168/305 (55%), Gaps = 4/305 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGG Sbjct: 1 MT--TLRIATRKSPLALWQSEHVATALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ +L+ Sbjct: 57 KGLFLKELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYATLQA 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I L+ ++ P+P QGA+ +E ++ + +L+ V++ T V ERA L Sbjct: 177 LEARITARLDAPEWLPAPAQGAVAVECRGDDARIHDLLAVLDAGRTRACVEAERAMNRAL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC +A FA +G L+ G+V ++ +G+ ++GR A + Sbjct: 237 HGSCHVPVAAFARWEGEDLFLQGMVGSASDGRLIHAEAHGSPDATEDLGRRVADGLFEKG 296 Query: 301 NKNVF 305 + Sbjct: 297 AAQLL 301 >gi|170738754|ref|YP_001767409.1| porphobilinogen deaminase [Methylobacterium sp. 4-46] gi|168193028|gb|ACA14975.1| porphobilinogen deaminase [Methylobacterium sp. 4-46] Length = 311 Score = 248 bits (632), Expect = 9e-64, Method: Composition-based stats. Identities = 116/304 (38%), Positives = 172/304 (56%), Gaps = 2/304 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEI 58 M +P RIGTR SP+ALA R + H P + ++ ++T DRI +R L+ I Sbjct: 1 MAHRPLRIGTRGSPMALAQTGMVRDRIAAAHPHLAEPGAMELVVVNTVADRILDRPLSAI 60 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLFT+E+E+ L +GEID AVHS KD+ T L GL I+ L R+D RD F+S + SL Sbjct: 61 GGKGLFTKELEQALFAGEIDVAVHSMKDVETWLPDGLVIACILERDDPRDAFLSLASGSL 120 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L + +GTSSLRR A +L R D+ ++ RG TR+ KL A LLA AG++R Sbjct: 121 AELPAGARVGTSSLRRGAQVLMRRPDLRIVPLRGNANTRIRKLEEGVCDATLLAIAGLER 180 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + + ++ +E+ P+ QGA+ IE + L++ + T ++ ER LA Sbjct: 181 LGLAHLARTVIPVEEMLPAVAQGALGIECRAADEDVIALLQAVACPRTTTALAAERGLLA 240 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 ELDGSC++ IA A G L G++ DG +R+G +A +IGR+A ++ Sbjct: 241 ELDGSCRTPIAALAQIDGDRLTLDGLLFLPDGSAHWATTRSGPAAEAASIGREAGADLKA 300 Query: 299 ISNK 302 + + Sbjct: 301 QAGE 304 >gi|188585750|ref|YP_001917295.1| porphobilinogen deaminase [Natranaerobius thermophilus JW/NM-WN-LF] gi|229836110|sp|B2A1G7|HEM3_NATTJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|179350437|gb|ACB84707.1| porphobilinogen deaminase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 311 Score = 248 bits (632), Expect = 9e-64, Method: Composition-based stats. Identities = 107/306 (34%), Positives = 166/306 (54%), Gaps = 7/306 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL L + P I I + TKGD++ N +L+++GGKGLF Sbjct: 2 KLRIGTRRSQLALDQTNWVVEQLKTHY--PDIEIEIKKIETKGDQLLNVSLSKVGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EI+ L+ GEID AVHS KD+PT+ + L+I A R D D IS+ ++ +L + Sbjct: 60 LKEIQNALLQGEIDLAVHSMKDIPTETTEDLEICAITKRVDPLDALISNNDITIDELPEN 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNKAHAILLAYAGIKRLKKEK 183 + IGTSSLRR + L +R+D+ +I RG I TR+NKL + A++LA AG+ R Sbjct: 120 AKIGTSSLRRGSQLKAYRNDLQIIPIRGNINTRMNKLQELPELDAVVLAKAGLVRSGMTD 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + ++ E P PGQGA+ +E +N +E + V++ ++ ++ ERAFL L GS Sbjct: 180 SISQNISPEIIVPCPGQGALGLEIRHDNENLKEKLAVLDDSESRKAIGAERAFLNRLGGS 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD----AINIGRDAAQYIRFI 299 C + +A + L+ G+V + DG+ + S + D +G D A+ + + Sbjct: 240 CHVPVGAYAEIISNELHLTGVVASEDGQDVIKRSVQTHLSDNNKIPSTLGNDLAEELIEL 299 Query: 300 SNKNVF 305 + Sbjct: 300 GANKIL 305 >gi|154686951|ref|YP_001422112.1| porphobilinogen deaminase [Bacillus amyloliquefaciens FZB42] gi|166201493|sp|A7Z7A5|HEM3_BACA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|154352802|gb|ABS74881.1| HemC [Bacillus amyloliquefaciens FZB42] Length = 313 Score = 248 bits (632), Expect = 9e-64, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 168/306 (54%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + ++G+R S LA+ + L +++ P +N I + TKGDRI + TL+++GGKG Sbjct: 1 MRTIKVGSRRSKLAMTQTKWVINKLKELN--PSYNFEIREIVTKGDRILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L+ EID AVHS KDMP L +GL I RED RD IS Q L + Sbjct: 59 LFVKEIEQALLHQEIDMAVHSMKDMPAVLPEGLVIGCIPKREDPRDALISKGHQKLDGIK 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 +IGTSSLRR A +L R D+++ RG I+TRL KL AI+LA AG+ R+ Sbjct: 119 EGGIIGTSSLRRSAQILAERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWK 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + V+ E L + P+ GQGA+ IE ++ + +L E T +V ERAFL ++ Sbjct: 179 DDVVSEFLEPDRCLPAVGQGALAIECRESDEELLKLFAQFTDEYTQRTVAAERAFLHAME 238 Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + G+V + DGK ++ + G+ D IG+ A + Sbjct: 239 GGCQVPIAGYASVNDRDEVELVGLVASPDGKTIYKETAAGH--DPEEIGKRCAAMMSEKG 296 Query: 301 NKNVFN 306 K + + Sbjct: 297 AKALID 302 >gi|116872985|ref|YP_849766.1| porphobilinogen deaminase [Listeria welshimeri serovar 6b str. SLCC5334] gi|123466350|sp|A0AJ05|HEM3_LISW6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|116741863|emb|CAK20987.1| porphobilinogen deaminase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 309 Score = 248 bits (632), Expect = 9e-64, Method: Composition-based stats. Identities = 113/308 (36%), Positives = 169/308 (54%), Gaps = 7/308 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK Sbjct: 1 MKRKIIVGSRRSKLALTQSNWVINKLKEQY--PEFDFEIKEIVTKGDRILDVTLSKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF E+E+ L + ID AVHS KD+P+ L +GL I A RE D F+ + SL DL Sbjct: 59 GLFVSEVEQALSNSTIDFAVHSMKDVPSSLEEGLVIGAIPKRESPLDCFVFNQVSSLDDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +++GTSSLRR A LL+ R D ++ RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 119 PKGAIVGTSSLRRAAQLLKHRPDFNIRPIRGNIDTRLQKLHVENFDAIILAKAGLARMGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E + E P+ GQGA+ IE ++ ++++ I+HE+T V ER FL Sbjct: 179 LENTTLKLEDIAPEVCLPAVGQGALAIECRESDQLIRDMLATIHHEETGICVEAERVFLK 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +L+G C+ IAGFA G ++F G+V +DG E G + IG A+ + Sbjct: 239 KLNGGCEIPIAGFATKIGEQIHFKGLVGNADGSKILESKEIG--ENPGQIGNKVAEVLLS 296 Query: 299 ISNKNVFN 306 + + Sbjct: 297 EGAETIIE 304 >gi|320449225|ref|YP_004201321.1| porphobilinogen deaminase [Thermus scotoductus SA-01] gi|320149394|gb|ADW20772.1| porphobilinogen deaminase [Thermus scotoductus SA-01] Length = 301 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 107/304 (35%), Positives = 159/304 (52%), Gaps = 8/304 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +GTR S LALA L + P + + T+GD+ N + Sbjct: 1 MRVIVVGTRGSALALAQTRFVVERLKE--SWPEAEFKVKTIKTRGDQGANPM-----EQA 53 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F +E+++ L+S EID AVHS KD+PT+ GL+I+A R+D RD F+ + L+DL Sbjct: 54 IFVKELQEALLSREIDIAVHSLKDLPTEEPPGLKIAAIPRRQDPRDAFLGKVYKRLEDLP 113 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSS+RRKA +L R D+ V D RG ++TRL L N + I+LA AG+ RL Sbjct: 114 EGAVVGTSSIRRKAQILAHRPDLVVKDLRGNVDTRLAALGNGEYDGIILAAAGLIRLDLR 173 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + L E P+PGQGA+ +E + A+EL ++H + D V ERAFL L Sbjct: 174 NRIDQFLEPEVLLPAPGQGALALEVRQGDDLAEELCYALHHHPSHDRVRAERAFLKGLGA 233 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C + + A + TL G+VL DGK F G+ +A +G + AQ + Sbjct: 234 GCLAPVGALAQVAEDGTLLLEGMVLTPDGKSFIRAEIEGDASEAEELGLELAQDVLEQGG 293 Query: 302 KNVF 305 + + Sbjct: 294 REIL 297 >gi|219117329|ref|XP_002179459.1| hydroxymethylbilane synthase [Phaeodactylum tricornutum CCAP 1055/1] gi|217409350|gb|EEC49282.1| hydroxymethylbilane synthase [Phaeodactylum tricornutum CCAP 1055/1] Length = 329 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 121/306 (39%), Positives = 179/306 (58%), Gaps = 4/306 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGK 61 +P RIGTR SPLALA A+ETR L++ I I L T+GD I +++L E+GGK Sbjct: 7 QPLRIGTRGSPLALAQAYETRKRLIENFPDLEAEGAIEICVLKTQGDMILDKSLMELGGK 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSLK 119 GLFT+E++ L+S E+D VHS KD+PT L G + LPRED D FI + ++ Sbjct: 67 GLFTKELDTALLSDEVDICVHSMKDVPTWLPDGTVLPCNLPREDTNDAFIYKDDSVKRIE 126 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 D+ SVIGT+SLRR+A L+ + ++FRG ++TRL KL++ A LLA AG+KR+ Sbjct: 127 DIPDGSVIGTASLRRQAQLMAKNPTLKCVNFRGNVQTRLRKLDDGVVDATLLAIAGLKRM 186 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + IL ++ P+ QGAI I+ ++ ++ + + +NH +T V+CER FL Sbjct: 187 DMDGCATSILEWDEMLPAVAQGAIGIQCRDDDERSLKYLAALNHPETKACVDCERGFLEA 246 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 LDG+CK+ IAG A + F G++ DG E G +A IGR+A + ++ Sbjct: 247 LDGNCKTPIAGQARIVDGKIMFRGLIAMPDGSKKFECESEGAIEEAAKIGREAGEGLKKE 306 Query: 300 SNKNVF 305 + + F Sbjct: 307 AGEEFF 312 >gi|254372115|ref|ZP_04987608.1| hydroxymethylbilane synthase [Francisella tularensis subsp. novicida GA99-3549] gi|151569846|gb|EDN35500.1| hydroxymethylbilane synthase [Francisella novicida GA99-3549] Length = 300 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 166/304 (54%), Gaps = 5/304 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I +R S LAL ++ + IP I + T+GD I ++ L +IGGK Sbjct: 1 MKQITIASRESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKA 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 58 LFMKELEIAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLP 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRRKA LL +R D+ + D RG ++TRL+KL+N AI+LA AG+ RL+ Sbjct: 118 KGAIVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELV 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 178 ERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C AI +A + + +V +SDG + G+ D +G+ AQ + + Sbjct: 238 GCHVAIGAYAELYNNQITLMAMVASSDGNKILKRKMIGD--DPTKLGKLLAQEMIALGAY 295 Query: 303 NVFN 306 + Sbjct: 296 KILE 299 >gi|295695321|ref|YP_003588559.1| porphobilinogen deaminase [Bacillus tusciae DSM 2912] gi|295410923|gb|ADG05415.1| porphobilinogen deaminase [Bacillus tusciae DSM 2912] Length = 310 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 102/300 (34%), Positives = 153/300 (51%), Gaps = 4/300 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LA+ ++P + ++P++T+GDR+ + L+ +GGKGLF Sbjct: 4 LRIGSRKSALAMTQTRWLIEQWQK--RVPGLSAEVVPMTTRGDRVLDVPLSRVGGKGLFV 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EEIE+ L+ ID AVHS KD+P +L G + A RED RD I+ + DL + Sbjct: 62 EEIERALLEKRIDAAVHSLKDLPAQLAPGTVVGAVPRREDPRDAVITRDGRPFDDLPSGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR A L R+R D++ I RG ++TRL KL + A++LA AGI RL I Sbjct: 122 RVGTSSLRRVAQLRRYRPDLAFIPLRGNVDTRLRKLAAGEVDAVVLAAAGILRLGLGDRI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ E P+ GQGA+ ++ + + ++ + +V ER LA L+G C+ Sbjct: 182 TEYLSPEICLPAVGQGALAVQCREADEDTRRSLESVEDAAARKTVEAERTCLAALEGGCQ 241 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 I A + + +V DG V G D +GR AA + + + Sbjct: 242 VPIGALAEIRDGHIRLAAMVARPDGSELLRVVVQG--EDPAEVGRRAAADLLELGAGKLL 299 >gi|253995539|ref|YP_003047603.1| porphobilinogen deaminase [Methylotenera mobilis JLW8] gi|253982218|gb|ACT47076.1| porphobilinogen deaminase [Methylotenera mobilis JLW8] Length = 313 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 104/302 (34%), Positives = 162/302 (53%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LA+ A +S L ++ P + I+ ++T GD+I + L ++GGKGL Sbjct: 11 KKLVIASRESALAMWQARHIQSRLQALY--PETEVTILGMTTTGDQILDTPLAKVGGKGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L G D AVHS KD+P L +G ++A RED RD F+S+ +L+DL Sbjct: 69 FVKELEIALADGRADLAVHSMKDVPMNLPEGFILAATGEREDPRDAFVSNDYATLEDLPA 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +S++GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+ RL+ Sbjct: 129 NSIVGTSSLRRQSQLQARFPHLKIESLRGNLQTRLRKLDEGQYAAIILAAAGLIRLELGN 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I++ + E P+ GQGA+ IE + P + +NH DT V ER L GS Sbjct: 189 RIRQFIAPEHSIPAVGQGALGIEISADRPDLIATLAPLNHPDTQVCVEAERGMSRSLAGS 248 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C + +A C+ ++ G V + DGK + G+R +A +G+ A + Sbjct: 249 CTVPLGAYAVCEADSIRITGFVASVDGKQMLIETAVGSRANAEALGKTLASQLVAKGADK 308 Query: 304 VF 305 + Sbjct: 309 IL 310 >gi|221310755|ref|ZP_03592602.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str. 168] gi|221315080|ref|ZP_03596885.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319999|ref|ZP_03601293.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str. JH642] gi|221324281|ref|ZP_03605575.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str. SMY] Length = 313 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 115/306 (37%), Positives = 167/306 (54%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGKG Sbjct: 1 MRTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFAFEIKEIVTKGDRIVDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L++ EID AVHS KDMP L +GL I RED RD IS L ++ Sbjct: 59 LFVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEMK 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 +VIGTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+ Sbjct: 119 KGAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWK 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++ Sbjct: 179 QDVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAME 238 Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG++ G + G+V + DGKI + + G D +G+ A + Sbjct: 239 GGCQVPIAGYSVLNGQDEIEMTGLVASPDGKIIFKETVTG--NDPEEVGKRCAALMADKG 296 Query: 301 NKNVFN 306 K++ + Sbjct: 297 AKDLID 302 >gi|108761567|ref|YP_630875.1| porphobilinogen deaminase [Myxococcus xanthus DK 1622] gi|123374611|sp|Q1D8Z8|HEM3_MYXXD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|108465447|gb|ABF90632.1| porphobilinogen deaminase [Myxococcus xanthus DK 1622] Length = 314 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 108/300 (36%), Positives = 159/300 (53%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLAL A + L H P + ++ ++T+GDR + L+ +GGKGLF Sbjct: 5 VRIATRQSPLALWQARHVGALLTSRH--PGLEVTLVEMTTEGDRFLSAPLSAVGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G D AVHS KDM + +GL ++A RED RDVF +L L + Sbjct: 63 KEIEQALLDGRADIAVHSLKDMTSVFPEGLILAAVPEREDPRDVFCGLGGLTLDTLPQGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR +L R D+ ++ RG ++TRL + LLAYAG+KRL E VI Sbjct: 123 RVGTSSLRRSCILRSRRPDVDIVSVRGNVQTRLARTREQGLAGALLAYAGLKRLGLEDVI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++L E P+ GQG + I+ ++ + + L+ + H T +V ERA LA+L+G C Sbjct: 183 TQVLPPEVSLPAVGQGVLAIQCRTDDARVRALLVPLEHATTRIAVTAERALLAKLEGGCT 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +AG+A G T++ G+V DG G A +G A + ++ Sbjct: 243 VPLAGYATVSGDTVFLRGLVGRPDGTHVVRGEVRGPVSQAHALGESLADDLLSRGAADIL 302 >gi|312114941|ref|YP_004012537.1| porphobilinogen deaminase [Rhodomicrobium vannielii ATCC 17100] gi|311220070|gb|ADP71438.1| porphobilinogen deaminase [Rhodomicrobium vannielii ATCC 17100] Length = 313 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 130/310 (41%), Positives = 190/310 (61%), Gaps = 6/310 (1%) Query: 1 MEK----KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLT 56 M+ + RIGTR S LALA A E ++ L ++ + + T GD+I ++ L+ Sbjct: 1 MKNHSDARQIRIGTRGSALALAQATEVQNRLAAIYG-DEVKFERVVIKTTGDKILDKALS 59 Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116 +GGKGLFT+E+E+ L + +ID AVHS KD+ L GL+I+ LPRED+RD FIS A+ Sbjct: 60 LVGGKGLFTKELEEALFADQIDIAVHSMKDVQAFLPDGLEIACNLPREDVRDAFISMKAK 119 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 SL D+ +VIGT+S+RR+A + R D+ + FRG +++RL KL + A A LLA AG+ Sbjct: 120 SLADMPEGAVIGTASVRREAFIKNKRPDLKTVLFRGNVQSRLKKLEDGVADATLLASAGL 179 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 RL I + + +ED P+P QGAI IE N+ +EL+ ++ E T +++ ERAF Sbjct: 180 NRLGLSDRITQHIPVEDMLPAPAQGAIGIEIRSNDQVTRELIMALHDEATGYAIDAERAF 239 Query: 237 LAELDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 L+ELDGSC++ IA A G + F G +L DG +E +R G+ DA +G+DAAQ Sbjct: 240 LSELDGSCRTPIAALARYDGHGRVSFKGAILTPDGARIYETTREGSANDAAAMGKDAAQE 299 Query: 296 IRFISNKNVF 305 + K+VF Sbjct: 300 LYARGGKDVF 309 >gi|58583630|ref|YP_202646.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae KACC10331] gi|75433978|sp|Q5GVL2|HEM3_XANOR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|58428224|gb|AAW77261.1| porphobilinogen deaminase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 304 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 168/305 (55%), Gaps = 4/305 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IG Sbjct: 1 MT--TLRIATRKSPLALWQSEHVAAALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGD 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G+ DCAVHS KD+P +L + A L R D D +S+ SL+ Sbjct: 57 KGLFLKELELAMLRGDADCAVHSFKDVPMELDDPFVLPAILERGDPADALVSNLYASLQA 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I L+ ++ P+P QGA+ +E ++ + L+ V++ T V ERA L Sbjct: 177 LDERISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRAL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC +A A +G L+ G+V ++ +G+ D ++GR AQ + Sbjct: 237 HGSCHVPVAALARWEGEGLFLQGMVGSASDGRLIHADAHGSADDTQDLGRRVAQGLFDKG 296 Query: 301 NKNVF 305 + Sbjct: 297 AAQLL 301 >gi|46580299|ref|YP_011107.1| porphobilinogen deaminase [Desulfovibrio vulgaris str. Hildenborough] gi|55976453|sp|Q72AV0|HEM3_DESVH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|46449716|gb|AAS96366.1| porphobilinogen deaminase [Desulfovibrio vulgaris str. Hildenborough] gi|311233718|gb|ADP86572.1| porphobilinogen deaminase [Desulfovibrio vulgaris RCH1] Length = 315 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 157/305 (51%), Gaps = 2/305 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR S LAL A +S + H ++ + + TKGD I + L ++GGKG Sbjct: 1 MKHLVIATRGSKLALWQAEHIKSLIETEHAG-KVDVSLKIIKTKGDIILDVPLAKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L+ G D AVHS KD+P +L +GL + RE+ D +S SL L Sbjct: 60 LFVKEIEEALLDGSADLAVHSMKDVPMELPEGLFLGCIPEREEPSDTLLSVRYASLDALP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR++ LL R D+ +I RG ++TRL KL + + AI++A AG+KRL Sbjct: 120 HGARVGTSSLRRQSQLLALRPDLDIISLRGNVDTRLRKLMDGEFDAIVMATAGLKRLGLA 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 E+L F P+ GQGA+ IE + ++++ ++H T V ER FLA L+G Sbjct: 180 APHHEVLAPPRFLPAVGQGALGIEFREDRADLRDMLAFLDHRPTRIRVEAERGFLAGLEG 239 Query: 243 SCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG A G+V G+ + G +A N G + A + Sbjct: 240 GCQVPIAGHAVMTGDDNFRIEGLVADLKGERVIRRTLEGTGANARNRGLELASQVLADGA 299 Query: 302 KNVFN 306 + + Sbjct: 300 AEILD 304 >gi|296331638|ref|ZP_06874107.1| porphobilinogen deaminase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675403|ref|YP_003867075.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus subtilis subsp. spizizenii str. W23] gi|296151233|gb|EFG92113.1| porphobilinogen deaminase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413647|gb|ADM38766.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus subtilis subsp. spizizenii str. W23] Length = 313 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 165/306 (53%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGKG Sbjct: 1 MRTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFAFEIKEIVTKGDRIVDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L++ +ID AVHS KDMP L +GL I RED RD IS L ++ Sbjct: 59 LFVKEIEQALLNEDIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNHVKLSEMK 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 +VIGTSSLRR A LL R DI++ RG I+TRL KL AI+LA AG+ R+ Sbjct: 119 EGAVIGTSSLRRSAQLLIERPDITIKWIRGNIDTRLKKLETEDYDAIILAAAGLSRMGWK 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + V+ E L + P+ GQGA+ IE ++ + L E T +V ERA+L ++ Sbjct: 179 QDVVTEFLEPDRCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAYLNAME 238 Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG++ + G+V + DGKI + + G D +G+ A + Sbjct: 239 GGCQVPIAGYSVLNEQDEIELTGLVTSPDGKIIFKETVTG--NDPEEVGKRCAALMADKG 296 Query: 301 NKNVFN 306 K + + Sbjct: 297 AKELID 302 >gi|315282478|ref|ZP_07870883.1| porphobilinogen deaminase [Listeria marthii FSL S4-120] gi|313613876|gb|EFR87615.1| porphobilinogen deaminase [Listeria marthii FSL S4-120] Length = 309 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 113/307 (36%), Positives = 170/307 (55%), Gaps = 7/307 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK Sbjct: 1 MKRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L Sbjct: 59 GLFVSEVEQALSDKAIDFAVHSMKDVPSSLKEGLVIGAIPKRESPLDCFVFNQVSSLDEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +VIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 119 PKGAVIGTSSLRRAAQLLKHRPDFIIKPIRGNIDTRLQKLHAENFDAIILAKAGLSRMGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E + E P+ GQGA+ IE ++ + ++++ ++HE+T V ER FL Sbjct: 179 LENTTLKLEDIPAELCLPAVGQGALAIECRESDQQIRDMLASVHHEETGVCVEAERVFLK 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +L+G C+ IAGFA G ++F G+V +DG + E + G + +IG A+ + Sbjct: 239 KLNGGCEIPIAGFAAKTGDVIHFKGLVGNADGSVILESEQTGT--NPSDIGNQVAEDLLS 296 Query: 299 ISNKNVF 305 + Sbjct: 297 EGADTII 303 >gi|16079867|ref|NP_390693.1| porphobilinogen deaminase [Bacillus subtilis subsp. subtilis str. 168] gi|238054381|sp|P16616|HEM3_BACSU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|143037|gb|AAA22512.1| porphobilinogen deaminase [Bacillus subtilis] gi|2635280|emb|CAB14775.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus subtilis subsp. subtilis str. 168] Length = 314 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 115/307 (37%), Positives = 167/307 (54%), Gaps = 6/307 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGK Sbjct: 1 MMRTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFAFEIKEIVTKGDRIVDVTLSKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +EIE+ L++ EID AVHS KDMP L +GL I RED RD IS L ++ Sbjct: 59 GLFVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEM 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +VIGTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+ Sbjct: 119 KKGAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGW 178 Query: 182 -EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL + Sbjct: 179 KQDVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAM 238 Query: 241 DGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ IAG++ G + G+V + DGKI + + G D +G+ A + Sbjct: 239 EGGCQVPIAGYSVLNGQDEIEMTGLVASPDGKIIFKETVTG--NDPEEVGKRCAALMADK 296 Query: 300 SNKNVFN 306 K++ + Sbjct: 297 GAKDLID 303 >gi|89894971|ref|YP_518458.1| hypothetical protein DSY2225 [Desulfitobacterium hafniense Y51] gi|219669373|ref|YP_002459808.1| porphobilinogen deaminase [Desulfitobacterium hafniense DCB-2] gi|123091755|sp|Q24VC8|HEM3_DESHY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800248|sp|B8G2M2|HEM3_DESHD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|89334419|dbj|BAE84014.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219539633|gb|ACL21372.1| porphobilinogen deaminase [Desulfitobacterium hafniense DCB-2] Length = 308 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 122/300 (40%), Positives = 174/300 (58%), Gaps = 4/300 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LAL A + L + + P V++P+ TKGD+I + L +IG KGLFT Sbjct: 4 VKIGTRDSQLALWQAEWVKRKLEEYY--PEREFVLVPMKTKGDKILDVPLAKIGDKGLFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L++GEIDCAVHS KD+PT L GL+I+A+ RE+ RDVF+S L L S Sbjct: 62 KELEVGLLNGEIDCAVHSLKDLPTVLPPGLEIAAFCEREEPRDVFLSKDGTPLGSLPAGS 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +IGTSSLRRKA L +RSD+S D RG ++TR KL + I+LA AG+KRL E I Sbjct: 122 IIGTSSLRRKAQLQNYRSDLSFADLRGNLQTRWRKLQESDMAGIVLAAAGVKRLGWEDRI 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E ++ E + GQGAI +E +E++ ++NH DT +V ERA L L+G C+ Sbjct: 182 TEYISEEIMLSAVGQGAIAVEIAAQRADVREMLDLLNHGDTERAVKAERALLYRLEGGCQ 241 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 I +A + + G+V + DG+ +V+ +G +GR AA + + Sbjct: 242 IPIGAWAVTEQQQIVLKGMVASLDGQRILKVTLSG--EHPEELGRQAADLLIAQGALEIL 299 >gi|91774391|ref|YP_544147.1| porphobilinogen deaminase [Methylobacillus flagellatus KT] gi|123253776|sp|Q1GXA1|HEM3_METFK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|91708378|gb|ABE48306.1| hydroxymethylbilane synthase [Methylobacillus flagellatus KT] Length = 310 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 105/302 (34%), Positives = 158/302 (52%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LA+ A + L ++ P + I+ ++T GD+I + L IGGKGL Sbjct: 5 KTLVIASRESALAMWQAQYIQGRLQTLY--PETEVTILGMTTTGDQILDSPLARIGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ L G D AVHS KD+P L G ++A R+D RD F+S+ +L L Sbjct: 63 FVKELEQALADGRADLAVHSMKDVPMHLPPGFALAAISERDDPRDAFVSNDYPNLASLPA 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S++GTSSLRR++ L + V RG ++TRL KL+ + AI+LA AG+KRL Sbjct: 123 GSIVGTSSLRRQSQLQARFPGLKVESLRGNLQTRLRKLDEGQYAAIILAAAGLKRLGLAS 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+E ++ ++ P+ GQGA+ IE + +++ +NH +T V ER L GS Sbjct: 183 RIRESIDPDNSIPAVGQGALGIEINAERLDLLKVLAPLNHPETAACVEAERGMSRALAGS 242 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ + FA G TL G V + DGK F S G +G+ A + + Sbjct: 243 CQVPLGAFAQQHGDTLQMTGFVASIDGKEFLRESVQGPAEQPEALGQALAAKLVALGADR 302 Query: 304 VF 305 + Sbjct: 303 IL 304 >gi|224094087|ref|XP_002310073.1| predicted protein [Populus trichocarpa] gi|222852976|gb|EEE90523.1| predicted protein [Populus trichocarpa] Length = 363 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 140/307 (45%), Positives = 188/307 (61%), Gaps = 6/307 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR LM H I I+ + T GD+I ++ L +IGGKGL Sbjct: 56 IRIGTRGSPLALAQAHETRDKLMASHSDLAEEGAIQIVIIKTTGDKIQSQPLADIGGKGL 115 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A SL DL Sbjct: 116 FTKEIDEALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSAASLADLPA 175 Query: 124 HSVIGTSSLRRKALLLRWRSDISV-IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S+IGT+SLRRK+ +L +SV +FRG ++TRL KLN A LLA AG+KRL Sbjct: 176 GSIIGTASLRRKSQILHRYPSLSVEENFRGNVQTRLRKLNEGVVKATLLALAGLKRLNMT 235 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + IL ++D P+ QGAI I N+ K + +NHE+T +V CERAFL LDG Sbjct: 236 ENVTSILPLDDMLPAVAQGAIGIACRSNDDKMVNYLASLNHEETRLAVACERAFLETLDG 295 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFI 299 SC++ IAG+A + F G+V + DG+ E SR G D I +G+DA + + Sbjct: 296 SCRTPIAGYARKDENGDCIFKGLVASPDGRRVLETSRKGPYAFDDMIAMGKDAGKELLSQ 355 Query: 300 SNKNVFN 306 + F+ Sbjct: 356 AGPGFFD 362 >gi|78357663|ref|YP_389112.1| porphobilinogen deaminase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123741224|sp|Q30Y29|HEM3_DESDG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78220068|gb|ABB39417.1| hydroxymethylbilane synthase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 316 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 103/304 (33%), Positives = 153/304 (50%), Gaps = 2/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR S LAL A + +M + + ++ L TKGD I + L ++GGKG Sbjct: 1 MKKIVIATRGSKLALWQAEHIKERIMQQYP-DSFEVELLVLKTKGDIILDVPLAKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L+ G D AVHS KD+P +L +GL + A RE D +S L L Sbjct: 60 LFVKEIEEALLDGRADIAVHSMKDVPMELPQGLTLGAIPEREVPTDSLLSARYDGLDALP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR++ +L R D+ V RG ++TR+ KL + + AI++A +G+KRL + Sbjct: 120 QGAVVGTSSLRRQSQILAMRPDLEVKWLRGNVQTRIRKLMDGEYDAIIMATSGLKRLGET 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 L F P+ GQGA+ +E + E++ ++H + V ER FL L G Sbjct: 180 APFHSELGPPLFMPAVGQGALGLEYRSDRQDLAEMLAFLDHRPSRICVEAERGFLFGLQG 239 Query: 243 SCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A G G+V DG + G DA + G A ++ Sbjct: 240 GCQVPIAGYAVMTGDNSFELTGLVAELDGTAVIRRTAAGTEADARDTGLTLAAQVKAAGA 299 Query: 302 KNVF 305 + Sbjct: 300 DAIL 303 >gi|120602319|ref|YP_966719.1| porphobilinogen deaminase [Desulfovibrio vulgaris DP4] gi|158513905|sp|A1VCX6|HEM3_DESVV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|120562548|gb|ABM28292.1| hydroxymethylbilane synthase [Desulfovibrio vulgaris DP4] Length = 315 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 157/305 (51%), Gaps = 2/305 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR S LAL A +S + H ++ + + TKGD I + L ++GGKG Sbjct: 1 MKHLVIATRGSKLALWQAEHIKSLIETEHAG-KVDVSLKIIKTKGDIILDVPLAKVGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L+ G D AVHS KD+P +L +GL + RE+ D +S SL L Sbjct: 60 LFVKEIEEALLDGSADLAVHSMKDVPMELPEGLFLGCIPEREEPSDTLLSVRYASLDALP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR++ LL R D+ +I RG ++TRL KL + + AI++A AG+KRL Sbjct: 120 HGARVGTSSLRRQSQLLALRPDLDIISLRGNVDTRLRKLMDGEFDAIVMATAGLKRLGLS 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 E+L F P+ GQGA+ IE + ++++ ++H T V ER FLA L+G Sbjct: 180 APHHEVLAPPRFLPAVGQGALGIEFREDRADLRDMLAFLDHRPTRIRVEAERGFLAGLEG 239 Query: 243 SCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG A G+V G+ + G +A N G + A + Sbjct: 240 GCQVPIAGHAVMTGDDDFRIEGLVADLKGERVIRRTLEGTGANARNRGLELASQVLADGA 299 Query: 302 KNVFN 306 + + Sbjct: 300 AEILD 304 >gi|253997747|ref|YP_003049810.1| porphobilinogen deaminase [Methylovorus sp. SIP3-4] gi|253984426|gb|ACT49283.1| porphobilinogen deaminase [Methylovorus sp. SIP3-4] Length = 320 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 103/301 (34%), Positives = 155/301 (51%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A ++ L ++ P + I+ ++T GD+I + L IGGKGLF Sbjct: 12 KLVIASRESALAMWQARHIQARLQALY--PSTQVEILGMTTTGDQILDSPLARIGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E+ L G D AVHS KD+P L +G ++A RED RD F+S+ SL+ L Sbjct: 70 VKELEQALADGRADLAVHSMKDVPMHLPEGFAMAAIGEREDPRDAFVSNDYPSLEALPAG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S++GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+ RL Sbjct: 130 SIVGTSSLRRQSQLQARFPHLVIESLRGNLQTRLRKLDEGQYAAIILAAAGLIRLGLGNR 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + + ED P+ GQGA+ IE + ++ +NH DT V ER L GSC Sbjct: 190 IAQTIAPEDSIPAVGQGALGIEINAARTDLLTVLAPLNHADTAACVEAERGMSRALAGSC 249 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A +G + +G V + DGK GN +G+ AQ + + Sbjct: 250 TVPLGAYATKQGENITIHGFVASVDGKQMLRAEATGNAAQPELLGQQLAQSLIARGADKI 309 Query: 305 F 305 Sbjct: 310 L 310 >gi|321312347|ref|YP_004204634.1| porphobilinogen deaminase [Bacillus subtilis BSn5] gi|320018621|gb|ADV93607.1| porphobilinogen deaminase [Bacillus subtilis BSn5] Length = 313 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 166/306 (54%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGKG Sbjct: 1 MRTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFAFEIKEIVTKGDRIVDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L++ EID AVHS KDMP L +GL I RED RD IS L ++ Sbjct: 59 LFVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEMK 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 +VIGTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+ Sbjct: 119 EGAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWK 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL ++ Sbjct: 179 QDVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAME 238 Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG++ G + +V + DGKI + + G D +G+ A + Sbjct: 239 GGCQVPIAGYSVLNGQDEIEMTALVASPDGKIIFKETVTG--NDPEEVGKRCAALMADKG 296 Query: 301 NKNVFN 306 K++ + Sbjct: 297 AKDLID 302 >gi|284006594|emb|CBA71855.1| porphobilinogen deaminase [Arsenophonus nasoniae] Length = 297 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 147/290 (50%), Gaps = 2/290 (0%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + A ++ L H P I +IP+ST+GD + + L +IGGKGLF +E+E L+ Sbjct: 1 MWQAIFVKTQLEKHH--PTLTIELIPMSTQGDILLDTPLAKIGGKGLFVKELENALLENR 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 D AVHS KD+P L + A R D RD F+S+ SL L S+IGTSSLRR+ Sbjct: 59 ADIAVHSIKDIPATFPNNLGLMAICQRGDPRDAFVSNQYDSLDALPAGSIIGTSSLRRQC 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 L + + D RG + TRL+KL+N + I+LA AG+KRL E I+ L E P Sbjct: 119 QLRHTYPHLVIQDLRGNVGTRLSKLDNGQYDGIILAVAGLKRLNLETRIRMPLPPEHSLP 178 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + GQGAI IE +++ Q + ++H DT + ER L G C+ I +A + Sbjct: 179 AVGQGAIGIECRLDDHHTQHFLAPLHHHDTAICIQAERTVNNRLQGGCQVPIGSYAIWQN 238 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 ++ +V DG R+ DA + + A+ + K + N Sbjct: 239 KQIWLRALVGTPDGSQIIRGERSFKPEDAQQMSIELAEELLNNGAKQILN 288 >gi|304309752|ref|YP_003809350.1| Porphobilinogen deaminase [gamma proteobacterium HdN1] gi|301795485|emb|CBL43683.1| Porphobilinogen deaminase [gamma proteobacterium HdN1] Length = 311 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 120/305 (39%), Positives = 166/305 (54%), Gaps = 2/305 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR S LAL A R+ L+ H P ++ II ++TKGD+I + L +IGG Sbjct: 1 MSNHRIRIATRESALALWQAEHVRACLLAAH--PGLDVEIIGMTTKGDKILDTPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P +GL +S L RED RD F+S+ +L Sbjct: 59 KGLFVKELEVAMLEGIADIAVHSMKDVPVDFPEGLGLSVILEREDPRDAFVSNQYDTLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GT SLRR+ L R DI +++ RG + +RL KL+ + AILLA AG+KRL Sbjct: 119 LPLGARVGTCSLRRQTQLRARRPDIEILELRGNVNSRLAKLDAGQFDAILLAAAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ P+ GQGAI IE ++ + L+ +NH DT V+ ERA L Sbjct: 179 FHERIRATLDPAASLPAVGQGAIGIECRTDDARTLALLAPLNHPDTHTCVSAERAMNHRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A G LY G+V DG G R DA +G A + Sbjct: 239 QGGCQVPIAGYAELHGDQLYMRGLVGEPDGSRILRAEIRGARADAAALGAALADDLLAQG 298 Query: 301 NKNVF 305 K + Sbjct: 299 AKEIL 303 >gi|212638453|ref|YP_002314973.1| porphobilinogen deaminase [Anoxybacillus flavithermus WK1] gi|212559933|gb|ACJ32988.1| Porphobilinogen deaminase (hydroxymethylbilane synthase) [Anoxybacillus flavithermus WK1] Length = 313 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 106/306 (34%), Positives = 157/306 (51%), Gaps = 5/306 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +G+R S LAL L + P + + TKGD+I + TL+++GGK Sbjct: 5 MMRKIIVGSRRSKLALTQTNWVIEQLKQLGA--PFEFEVKEIVTKGDQILHVTLSKVGGK 62 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +EIE+ ++ GEID AVHS KDMP L GL I RED RDV IS + L Sbjct: 63 GLFVKEIEQAMLDGEIDFAVHSMKDMPAVLPDGLVIGCVPKREDHRDVLISKGHIPFEQL 122 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +++GTSSLRR A LL R D+ + RG I+TRL KL + AI+LA AG+ R+ Sbjct: 123 PSGAIVGTSSLRRSAQLLAVRPDLQIQWIRGNIDTRLAKLQTDAYDAIILAAAGLHRMGW 182 Query: 182 EKV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K I + L + P+ GQGA+ IE N+ + + + + T + ERAFL + Sbjct: 183 AKEVITQYLPTDICVPAVGQGALAIECRENDAELLHWLNKLTDKQTERATRAERAFLQHI 242 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ +AG+AY + +V +G + G + +G +AA+ + Sbjct: 243 EGGCQVPVAGYAYVDEDAIVLTALVATPNGTEVLKEVVKGT--EPEKVGTEAAKRLIERG 300 Query: 301 NKNVFN 306 K + Sbjct: 301 AKQLIE 306 >gi|317052496|ref|YP_004113612.1| porphobilinogen deaminase [Desulfurispirillum indicum S5] gi|316947580|gb|ADU67056.1| porphobilinogen deaminase [Desulfurispirillum indicum S5] Length = 308 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 103/304 (33%), Positives = 162/304 (53%), Gaps = 7/304 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IGTR S LAL A ++ L + + + + TKGD+I + L ++GGKGLF Sbjct: 2 KIVIGTRASQLALWQAEHIKAELES--RWDDVQVELKKIITKGDKILDSPLAKVGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD--LA 122 +EIE +LI G ID AVHS KD+PT+ +GL++ A RED RD FIS +S+ + Sbjct: 60 VKEIENELIDGTIDIAVHSMKDVPTEFPEGLELFAITEREDPRDAFISRNGKSMAELGQQ 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 IGTSSLRR+A LL +++ RG ++TRL ++ + I+LA AG+KRL+ E Sbjct: 120 KDVTIGTSSLRRQAQLLTLYPHWNIVSIRGNVQTRLKRMEERQMDGIILAAAGMKRLELE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++KE + E P+ GQGA+ +E + +E ++ + H T V ERA L ++G Sbjct: 180 HLVKEYIAPEVMIPAIGQGALGLEVRSADTALKERLEFLRHPVTTQCVLAERALLRTMEG 239 Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ I +A + +++ +V + DGK + G + +G A + Sbjct: 240 GCQVPIGAYAVPKENGSVFLNALVASVDGKEVVKGQLEG--NNPEELGVTLANQMLNSGA 297 Query: 302 KNVF 305 + + Sbjct: 298 RAIL 301 >gi|163854244|ref|YP_001642287.1| porphobilinogen deaminase [Methylobacterium extorquens PA1] gi|163665849|gb|ABY33216.1| porphobilinogen deaminase [Methylobacterium extorquens PA1] Length = 309 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 122/307 (39%), Positives = 174/307 (56%), Gaps = 4/307 (1%) Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + RIGTR SP+ALA R ++ + P I+ +ST DR+ +R L+EIG Sbjct: 1 MSLSRALRIGTRGSPMALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSL 118 GKGLFT+E+E+ L + EID AVHS KD+ T L GL I+ L R+D RD F+S + A L Sbjct: 59 GKGLFTKELEQALFADEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGL 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 DL + +GTSSLRR A +L R D++++ RG TR+ KL + A LLA AG++R Sbjct: 119 ADLPPGARVGTSSLRRGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L V + +L++E+ P+ QGA+ IE + + L+ + T +++ ER LA Sbjct: 179 LGMADVARSVLSVEEMLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLA 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 ELDGSC++ IA A KG + G++ DG V R G DA IGRDA ++ Sbjct: 239 ELDGSCRTPIAALAQVKGDRISLDGLLFLPDGSRHWAVHREGLAADADTIGRDAGAELKR 298 Query: 299 ISNKNVF 305 + F Sbjct: 299 AAGDVYF 305 >gi|21232940|ref|NP_638857.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766987|ref|YP_241749.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris str. 8004] gi|23821678|sp|Q8P536|HEM3_XANCP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|81307026|sp|Q4UYZ4|HEM3_XANC8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|21114777|gb|AAM42781.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572319|gb|AAY47729.1| porphobilinogen deaminase [Xanthomonas campestris pv. campestris str. 8004] Length = 304 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 168/305 (55%), Gaps = 4/305 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL + ++L H P +V++P+ST+GD + +R+L IGG Sbjct: 1 MT--TLRIATRKSPLALWQSEHVATALRQHH--PGLEVVLVPMSTRGDEVLDRSLAAIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ GE DCAVHS KD+P +L + A L R D D +S+ +L+ Sbjct: 57 KGLFLKELELAMLRGEADCAVHSLKDVPMELDAPFVLPAILERGDPADALVSNLYATLQA 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L L + +GTSSLRR+A L R D+ +ID RG + TRL KL+N AI+LA AG++RL Sbjct: 117 LPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNGGYDAIVLACAGLQRLG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I L+ ++ P+P QGA+ +E ++ + +L+ V++ T V ERA L Sbjct: 177 LEARITARLDAPEWLPAPAQGAVAVECRGDDARIHDLLAVLDAGRTRACVEAERAMNRAL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC +A FA +G L+ G+V ++ +G+ ++GR A + Sbjct: 237 HGSCHVPVAAFARWEGEDLFLQGMVGSASDGRLIHAEAHGSPDATEDLGRLVADGLFEKG 296 Query: 301 NKNVF 305 + Sbjct: 297 AAQLL 301 >gi|224499785|ref|ZP_03668134.1| porphobilinogen deaminase [Listeria monocytogenes Finland 1988] Length = 309 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 115/307 (37%), Positives = 167/307 (54%), Gaps = 7/307 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK Sbjct: 1 MKRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L Sbjct: 59 GLFVSEVEQALSDEAIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNQVNSLDEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 119 PQGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL Sbjct: 179 LENTTLKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLK 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +L+G C+ IAGFA + F G+V +DG I E + G + IG A+ + Sbjct: 239 KLNGGCEIPIAGFATRANEVVQFKGLVGNADGSIILESEQVG--ANPSEIGNKVAEDLLS 296 Query: 299 ISNKNVF 305 + Sbjct: 297 EGADTII 303 >gi|15615608|ref|NP_243912.1| porphobilinogen deaminase [Bacillus halodurans C-125] gi|11386834|sp|Q9K8G0|HEM3_BACHD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|10175668|dbj|BAB06765.1| porphobilinogen deaminase [Bacillus halodurans C-125] Length = 311 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 164/306 (53%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + IG+R S LAL S L + P + I + TKGD+I + TL+++GGKG Sbjct: 1 MRKIIIGSRRSQLALTQTEWVISKLKEAGA--PFDFEIKKIITKGDQILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ + + EID AVHS KD+P+ L +G + A R D RD IS+ +L +L Sbjct: 59 LFVKEIEQAMANKEIDIAVHSMKDVPSVLQEGFALGATTTRVDPRDALISNEGYTLAELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S++GTSSLRR A +L R D+ V RG IETRL KL AI+LA AG++R+ Sbjct: 119 AGSIVGTSSLRRSAQILAKRPDLEVKWIRGNIETRLRKLKEEDFDAIILAAAGLERMGWS 178 Query: 183 KVI-KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ + P+ GQGA+ IE ++ + E++K IN + T +V ER FL ++ Sbjct: 179 NEIVTEYLDPDLCVPAVGQGALGIECRADDDEVLEMLKTINDDTTAKTVLAERTFLHRME 238 Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + +V DG+ + G D + +G AQ + Sbjct: 239 GGCQVPIAGYATLTDEGEIELTALVGTPDGEQIFKEILRGK--DPVQLGETMAQALMDQG 296 Query: 301 NKNVFN 306 K V Sbjct: 297 AKEVLE 302 >gi|89098939|ref|ZP_01171819.1| porphobilinogen deaminase [Bacillus sp. NRRL B-14911] gi|89086343|gb|EAR65464.1| porphobilinogen deaminase [Bacillus sp. NRRL B-14911] Length = 311 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 162/306 (52%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + + + TKGD+I + TL+++GGKG Sbjct: 1 MRKIIVGSRRSKLALTQTNWVMDQLKKIDD--SFEFEVKEIVTKGDQILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ ++ EID AVHS KDMP L +GL I + RED RD IS Q+L L Sbjct: 59 LFVKEIEQAMLDEEIDMAVHSMKDMPAVLPEGLVIGSIPEREDHRDALISKGHQTLDQLK 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR A LL R D+ + RG I+TRL KL + AI+LA AG+ R+ Sbjct: 119 PGAVVGTSSLRRGAQLLAKRPDLEIKWIRGNIDTRLAKLETEEYDAIILAAAGLSRMGWT 178 Query: 183 KVIK-EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E L E P+ GQGA+ IE ++ + EL+ T +V ERAFL +++ Sbjct: 179 TDTVSEFLEPEVCLPAVGQGALSIECRESDKELLELLSKFTCGTTNQTVRAERAFLHKME 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + G+V + DGK ++ G D + +G A+ + Sbjct: 239 GGCQVPIAGYAVLNEKDEIELTGLVASPDGKTIYKEKVTG--ADPVEVGLRTAEKLIEKG 296 Query: 301 NKNVFN 306 K + + Sbjct: 297 AKKLID 302 >gi|148654060|ref|YP_001281153.1| porphobilinogen deaminase [Psychrobacter sp. PRwf-1] gi|148573144|gb|ABQ95203.1| porphobilinogen deaminase [Psychrobacter sp. PRwf-1] Length = 339 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 107/323 (33%), Positives = 168/323 (52%), Gaps = 21/323 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K I TR SPLA+ A ++ L ++ P + ++ + T+GD+I + L +IGGK Sbjct: 9 SLKTLNIATRKSPLAMWQAEHIKARLESLY--PDLEVNLVTMVTQGDKILDTPLAKIGGK 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E+ L G D AVHS KD+P L +GL + Y RE D F+S+T SL L Sbjct: 67 GLFVKELEQALYDGRADIAVHSLKDVPMVLPEGLILGTYCKRETPTDAFVSNTYDSLDAL 126 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GT+SLRR+ + R D+ + RG ++TRL+KL+ + AI+LA +G+KR++ Sbjct: 127 PQGAVVGTASLRRQCQIKAHRPDLIIKSLRGNVQTRLSKLDAGEYDAIILATSGLKRVEL 186 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 IK+ ++I+ P+ GQGA+ IE ++ L+K +N + ERA L+ Sbjct: 187 SDRIKQEIDIDISLPAVGQGALAIECRSDDDAVLSLLKPLNDGQARIRLMAERALNRRLE 246 Query: 242 GSCKSAIAGFAYCK-----------GSTLYFYGIVLASDGKIFHEVSRN----GNRCD-- 284 G C+ IA FA + TL+ G V + DG + + GN+ D Sbjct: 247 GGCQVPIAAFAVIEKGAENDDTGSHNKTLWLRGRVGSEDGTTLLKADKRIALMGNQADRE 306 Query: 285 --AINIGRDAAQYIRFISNKNVF 305 A +G D A + + + Sbjct: 307 AQAEQLGIDVADELLSLGADGIL 329 >gi|315645740|ref|ZP_07898864.1| porphobilinogen deaminase [Paenibacillus vortex V453] gi|315279218|gb|EFU42528.1| porphobilinogen deaminase [Paenibacillus vortex V453] Length = 318 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 110/315 (34%), Positives = 170/315 (53%), Gaps = 14/315 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGG 60 + +G+R S LAL + L + K + + + TKGDRI + TL+++GG Sbjct: 1 MRTIVVGSRQSALALTQTGQVIDDLKRLAKEHGLDYDFTVKKIVTKGDRILDVTLSKVGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ ++ GEID AVHS KDMP+ L +GL A R+D RD IS +L D Sbjct: 61 KGLFVKEIEQAMLDGEIDMAVHSMKDMPSVLPEGLVSGAVPARKDPRDCLISKEGATLDD 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR + L +R D+ + RG I++R+ K+ + AI+LA AG++R+ Sbjct: 121 LPQGAKVGTSSLRRSSQLKAYRPDLQIDWIRGNIDSRIRKMEEGEFQAIVLATAGLQRMG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I L +E P+ GQGA+ IE N+ + L+ + N E T +V ER FL+EL Sbjct: 181 WEDRITSHLPVEISLPAVGQGALGIECRENDSELLHLLSLYNDEVTARTVAAERKFLSEL 240 Query: 241 DGSCKSAIAGFAYCKG----------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 +G C+ I +A K + + G+V + DG+I + S G D ++G Sbjct: 241 NGGCQVPIGAYAILKNVDTGDSRGEQNVIQLTGMVGSPDGEIILKESAEGT--DPESLGV 298 Query: 291 DAAQYIRFISNKNVF 305 + A ++ + + Sbjct: 299 EVAAKLKAKGAEKIL 313 >gi|291485230|dbj|BAI86305.1| porphobilinogen deaminase [Bacillus subtilis subsp. natto BEST195] Length = 314 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 115/307 (37%), Positives = 167/307 (54%), Gaps = 6/307 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + ++G+R S LA+ L +++ P I + TKGDRI + TL+++GGK Sbjct: 1 MMRTIKVGSRRSKLAMTQTKWVIQKLKEIN--PSFVFEIKEIVTKGDRIVDVTLSKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +EIE+ L++ EID AVHS KDMP L +GL I RED RD IS L ++ Sbjct: 59 GLFVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEM 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +VIGTSSLRR A LL R D+++ RG I+TRL KL AI+LA AG+ R+ Sbjct: 119 KEGAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGW 178 Query: 182 -EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + V+ E L E P+ GQGA+ IE ++ + L E T +V ERAFL + Sbjct: 179 KQDVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAM 238 Query: 241 DGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ IAG++ G + G+V + DGKI + + G D +G+ A + Sbjct: 239 EGGCQVPIAGYSVLNGQDEIEMTGLVASPDGKIIFKETVTG--NDPEEVGKRCAALMADR 296 Query: 300 SNKNVFN 306 K++ + Sbjct: 297 GAKDLID 303 >gi|302838564|ref|XP_002950840.1| hypothetical protein VOLCADRAFT_85406 [Volvox carteri f. nagariensis] gi|300263957|gb|EFJ48155.1| hypothetical protein VOLCADRAFT_85406 [Volvox carteri f. nagariensis] Length = 355 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 137/310 (44%), Positives = 191/310 (61%), Gaps = 5/310 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGG 60 K +IGTR SPLALA A+ TR L + I+ + T GD+I N+ L +IGG Sbjct: 46 TKTVKIGTRGSPLALAQAYLTRDLLKKNFPELNEEGALEIVIIKTTGDKILNQPLADIGG 105 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EI+ L+ G+ID AVHS KD+PT L +G + LPRED+RDVFIS TA+ L + Sbjct: 106 KGLFTKEIDDALLGGKIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDVFISPTAKDLSE 165 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+G++SLRR+A +L + V +FRG ++TRL KLN A LLA AG+KRL Sbjct: 166 LPAGAVVGSASLRRQAQILAKYPHLKVENFRGNVQTRLRKLNEGACSATLLALAGLKRLD 225 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +IL+IE+ P+ QGAI I + +++L+ +NHE+T +V CERAFLA L Sbjct: 226 MTAHITKILSIEEMLPAVSQGAIGIACRTQDDASRKLLAALNHEETRIAVVCERAFLAAL 285 Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIR 297 DGSC++ IAG+A+ L+F G+V DGK SR + DA+ G DA + ++ Sbjct: 286 DGSCRTPIAGYAHKGSDGQLHFSGLVATPDGKQMMRTSRVASFTDADAVKAGEDAGRELK 345 Query: 298 FISNKNVFNF 307 K +F + Sbjct: 346 ATGPKELFMY 355 >gi|298292774|ref|YP_003694713.1| porphobilinogen deaminase [Starkeya novella DSM 506] gi|296929285|gb|ADH90094.1| porphobilinogen deaminase [Starkeya novella DSM 506] Length = 309 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 124/300 (41%), Positives = 176/300 (58%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR SPLAL A R +L+ H P + + + T GD IT+R L+E GGKGLFT Sbjct: 8 LRLGTRGSPLALWQAHAVRDALVKAHGWAPEAVEVQVIRTTGDAITDRALSEAGGKGLFT 67 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ ID AVHSAKDM TKL GL + YLPR D+RD I SL DL + Sbjct: 68 KELEEALLDRRIDLAVHSAKDMATKLPDGLHLVGYLPRADVRDALILREGSSLADLKPGA 127 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT+SLRR+A L R R D+ V RG + TRL+K+ + + LLA AG+ RL Sbjct: 128 KVGTASLRREAQLRRLRPDLQVSLLRGNVHTRLSKVESGEFDGTLLALAGLTRLGMADKA 187 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +L++ DF P+ GQGA+ IE+ + L+ + T ++ ERA+L ELDGSC+ Sbjct: 188 SALLDVADFLPAVGQGAVAIESRFGDIAVDALLVPVTCPATGLALRVERAYLGELDGSCR 247 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + I G A +G + F G+VL+ DG ++E+ R G A+ +G A Q +R + ++ Sbjct: 248 TPIGGLAEVQGEEIRFRGVVLSPDGSRYYEIVRYGPANRALELGLAAGQEMRAMVPADLL 307 >gi|327439433|dbj|BAK15798.1| porphobilinogen deaminase [Solibacillus silvestris StLB046] Length = 310 Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 113/300 (37%), Positives = 168/300 (56%), Gaps = 5/300 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + L + P + + + TKGDRI + L+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFINELKEAGV--PFDFEVKEIVTKGDRILDVQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L EID AVHS KDMP L +GL I PRED RD FIS+ DL Sbjct: 59 LFVKEIEQALYDKEIDFAVHSMKDMPAVLPEGLIIGCIPPREDARDAFISNGHVKFADLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 +++GTSSLRR A LL+ R D+ + RG ++TRL KL AI+LA AG+KRL Sbjct: 119 KGAIVGTSSLRRSAQLLQARPDLEIKWIRGNVDTRLKKLETEDFDAIILAAAGLKRLGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 ++V+ E L+ + P+ QG++ IE ++ + E + + TW + + ER+FLA +D Sbjct: 179 DEVVTEYLDTDICLPAVAQGSLGIECRADDTELLEQLTKLTDATTWATAHAERSFLAAMD 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ IAG+A +G T+ G+V A D + ++ + G DA +G+ A + Sbjct: 239 GGCQVPIAGYATVEGDTITLTGLVAAPDASVTYKETLTGT--DADAVGKAVAAKLTEQGA 296 >gi|313608617|gb|EFR84478.1| porphobilinogen deaminase [Listeria monocytogenes FSL F2-208] Length = 309 Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 113/307 (36%), Positives = 166/307 (54%), Gaps = 7/307 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK Sbjct: 1 MKRKIIVGSRRSKLALTQSNWVINKLKENY--PAFDFEIKEIVTKGDRILDVTLSKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + +L +L Sbjct: 59 GLFVSEVEQALSDKTIDFAVHSMKDVPSSLKEGLVIGAIPKRESPLDCFVFNQMNALDEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 119 PHGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL Sbjct: 179 LENTTLKLXXXXPELCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLK 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +L+G C+ IAGFA ++F G+V +DG I E + G + IG A+ + Sbjct: 239 KLNGGCEIPIAGFATKANEAVHFKGLVGNADGSIILEAEQTG--ANPSEIGNKVAEDLLS 296 Query: 299 ISNKNVF 305 + Sbjct: 297 KGADTII 303 >gi|16803596|ref|NP_465081.1| porphobilinogen deaminase [Listeria monocytogenes EGD-e] gi|47096721|ref|ZP_00234306.1| porphobilinogen deaminase [Listeria monocytogenes str. 1/2a F6854] gi|224501504|ref|ZP_03669811.1| porphobilinogen deaminase [Listeria monocytogenes FSL R2-561] gi|254831957|ref|ZP_05236612.1| porphobilinogen deaminase [Listeria monocytogenes 10403S] gi|254898277|ref|ZP_05258201.1| porphobilinogen deaminase [Listeria monocytogenes J0161] gi|254912230|ref|ZP_05262242.1| porphobilinogen deaminase [Listeria monocytogenes J2818] gi|254936558|ref|ZP_05268255.1| porphobilinogen deaminase [Listeria monocytogenes F6900] gi|284801947|ref|YP_003413812.1| porphobilinogen deaminase [Listeria monocytogenes 08-5578] gi|284995089|ref|YP_003416857.1| porphobilinogen deaminase [Listeria monocytogenes 08-5923] gi|23821694|sp|Q8Y6X5|HEM3_LISMO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|16410985|emb|CAC99634.1| hemC [Listeria monocytogenes EGD-e] gi|47014905|gb|EAL05853.1| porphobilinogen deaminase [Listeria monocytogenes str. 1/2a F6854] gi|258609152|gb|EEW21760.1| porphobilinogen deaminase [Listeria monocytogenes F6900] gi|284057509|gb|ADB68450.1| porphobilinogen deaminase [Listeria monocytogenes 08-5578] gi|284060556|gb|ADB71495.1| porphobilinogen deaminase [Listeria monocytogenes 08-5923] gi|293590205|gb|EFF98539.1| porphobilinogen deaminase [Listeria monocytogenes J2818] Length = 309 Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 115/307 (37%), Positives = 167/307 (54%), Gaps = 7/307 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK Sbjct: 1 MKRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L Sbjct: 59 GLFVSEVEQALSDEAIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNQVNSLDEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 119 PQGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL Sbjct: 179 LENTTLKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLK 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +L+G C+ IAGFA + F G+V +DG I E + G + IG A+ + Sbjct: 239 KLNGGCEIPIAGFATRANEFVQFKGLVGNADGSIILESEQVG--ANPSEIGNKVAEDLLS 296 Query: 299 ISNKNVF 305 + Sbjct: 297 EGADTII 303 >gi|254828209|ref|ZP_05232896.1| porphobilinogen deaminase [Listeria monocytogenes FSL N3-165] gi|258600598|gb|EEW13923.1| porphobilinogen deaminase [Listeria monocytogenes FSL N3-165] Length = 309 Score = 246 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 116/307 (37%), Positives = 167/307 (54%), Gaps = 7/307 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK Sbjct: 1 MKRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF E+E+ L ID AVHS KD+P+ L KGL I A RE D F+ + SL +L Sbjct: 59 GLFVSEVEQALSDEAIDFAVHSMKDVPSSLKKGLIIGAIPKRESPLDCFVFNQVNSLDEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 119 PQGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL Sbjct: 179 LENTTLKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLK 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +L+G C+ IAGFA + F G+V +DG I E + G + IG A+ + Sbjct: 239 KLNGGCEIPIAGFATRANEFVQFKGLVGNADGSIILESEQVG--ANPSEIGNKVAEDLLS 296 Query: 299 ISNKNVF 305 + Sbjct: 297 EGADTII 303 >gi|289434836|ref|YP_003464708.1| hypothetical protein lse_1471 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171080|emb|CBH27622.1| hemC [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 309 Score = 246 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 115/307 (37%), Positives = 169/307 (55%), Gaps = 7/307 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK Sbjct: 1 MKRKIIVGSRRSKLALTQSGWVIARLKENY--PEIDFEIKEIVTKGDRILDVTLSKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF E+E+ L G ID AVHS KD+P+ + +GL I A RE D F+ +T +S DL Sbjct: 59 GLFVSEVEQALSDGAIDFAVHSMKDVPSSIKEGLTIGAIPKRESALDCFVFNTVESFHDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +VIGTSSLRR A +LR R D + RG I+TRL KL++ AI+LA AG+ R+ Sbjct: 119 PTAAVIGTSSLRRAAQILRQRPDFVIKPIRGNIDTRLQKLHDENFDAIILAKAGLSRMGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E ++ E P+ GQGA+ IE N+ + +++ I+HE+T V ER FL Sbjct: 179 LENTTLKLEDISPELCLPAVGQGALAIECRENDKQICDMLASIHHEETGICVEAERVFLK 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +L+G C+ IAGFA + F G+V +DG R G + + IG A+ + Sbjct: 239 KLNGGCEIPIAGFATKTAGQIKFKGLVGNADGSTILSAERTG--ENPMTIGNQVAEALLS 296 Query: 299 ISNKNVF 305 + Sbjct: 297 EGADTII 303 >gi|254440462|ref|ZP_05053956.1| porphobilinogen deaminase [Octadecabacter antarcticus 307] gi|198255908|gb|EDY80222.1| porphobilinogen deaminase [Octadecabacter antarcticus 307] Length = 321 Score = 246 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 117/305 (38%), Positives = 174/305 (57%), Gaps = 4/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A ETR+ LM + + + T GD + L IG Sbjct: 11 PLKIGTRGSPLALAQAHETRARLMVAFDLAEAAFEVCVIKTTGDDRSLIDADIPLKVIGN 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ +++G+ID AVHS KDMP GL + +LPRED RD F+S + D Sbjct: 71 KGLFTKEIEEAMLAGQIDIAVHSTKDMPVAQPDGLVLDVFLPREDARDAFVSVKYSGIPD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+A LL R D++V++FRG ++TRL KL + A A LA AG+ R+ Sbjct: 131 LPEGAIVGTSSLRRRAQLLAKRPDLTVVEFRGNVQTRLKKLADGLADATFLAMAGLNRMG 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + +++ D P+ QG I IE +++ +A++++ I+ + ER+FLA L Sbjct: 191 MDDAAMGAIDLADMLPAIAQGTISIERRIDDLRARDMLAAIHDVQAGQQMAAERSFLAAL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A G ++ G +L DG R G + +G++ AQ + + Sbjct: 251 DGSCETPIAGLAMIDGDNMWLRGEILKPDGSQVFTGERRGLVTEGRAMGKELAQELLGQA 310 Query: 301 NKNVF 305 + F Sbjct: 311 GPDFF 315 >gi|313633107|gb|EFS00005.1| porphobilinogen deaminase [Listeria seeligeri FSL N1-067] Length = 309 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 115/307 (37%), Positives = 168/307 (54%), Gaps = 7/307 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK Sbjct: 1 MKRKIIVGSRRSKLALTQSGWVIARLKENY--PEIDFEIKEIVTKGDRILDVTLSKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF E+E+ L G ID AVHS KD+P+ + +GL I A RE D F+ +T S DL Sbjct: 59 GLFVSEVEQALSDGAIDFAVHSMKDVPSSIKEGLTIGAIPKRESALDCFVFNTVGSFHDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +VIGTSSLRR A +LR R D + RG I+TRL KL++ AI+LA AG+ R+ Sbjct: 119 PTAAVIGTSSLRRAAQILRQRPDFVIKPIRGNIDTRLQKLHDENFDAIILAKAGLSRMGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E ++ E P+ GQGA+ IE N+ + +++ I+HE+T V ER FL Sbjct: 179 LENTTLKLEDISPELCLPAVGQGALAIECRENDKQICDMLASIHHEETGICVEAERVFLK 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +L+G C+ IAGFA + F G+V +DG R G + + IG A+ + Sbjct: 239 KLNGGCEIPIAGFATKTAGQIKFKGLVGNADGSTILSAERTG--ENPMTIGNQVAEALLS 296 Query: 299 ISNKNVF 305 + Sbjct: 297 EGADTII 303 >gi|255521282|ref|ZP_05388519.1| porphobilinogen deaminase [Listeria monocytogenes FSL J1-175] Length = 309 Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats. Identities = 114/307 (37%), Positives = 167/307 (54%), Gaps = 7/307 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK Sbjct: 1 MKRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L Sbjct: 59 GLFVSEVEQALSDEVIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNRVNSLDEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 119 PQGSVIGTSSLRRAAQLLKHRPDFVINPIRGNIDTRLQKLHAENFDAIILAKAGLARMGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL Sbjct: 179 LENTTLKLEDIPPELCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLK 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +L+G C+ IAGFA ++F G+V +DG I + G + IG A+ + Sbjct: 239 KLNGGCEIPIAGFATRANEVVHFKGLVGNADGSIILASEQAG--ANPSEIGNKVAEDLLS 296 Query: 299 ISNKNVF 305 + Sbjct: 297 EGADTII 303 >gi|2495180|sp|Q43082|HEM3_PEA RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase; Flags: Precursor gi|313724|emb|CAA51820.1| hydroxymethylbilane synthase [Pisum sativum] Length = 369 Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats. Identities = 141/307 (45%), Positives = 189/307 (61%), Gaps = 6/307 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR LM H I I+ + T GD+I ++ L +IGGKGL Sbjct: 62 IRIGTRGSPLALAQAHETRDKLMASHTELAEEGAIQIVIIKTTGDKILSQPLADIGGKGL 121 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A SL DL Sbjct: 122 FTKEIDEALINGDIDIAVHSMKDVPTYLPEETILPCNLPREDVRDAFISLSAASLADLPA 181 Query: 124 HSVIGTSSLRRKALL-LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SVIGT+SLRRK+ + R+ S +FRG ++TRL KL+ A LLA AG+KRL Sbjct: 182 GSVIGTASLRRKSQILHRYPSLTVQDNFRGNVQTRLRKLSEGVVKATLLALAGLKRLNMT 241 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + L+I+D P+ QGAI I N+ K E + +NHE+T +++CERAFL LDG Sbjct: 242 ENVTSTLSIDDMLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAISCERAFLTTLDG 301 Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFI 299 SC++ IAG+A K F G+V + DG E SR G+ D + IG+DA + + Sbjct: 302 SCRTPIAGYASRDKDGNCLFRGLVASPDGTRVLETSRIGSYTYEDMMKIGKDAGEELLSR 361 Query: 300 SNKNVFN 306 + FN Sbjct: 362 AGPGFFN 368 >gi|261405370|ref|YP_003241611.1| porphobilinogen deaminase [Paenibacillus sp. Y412MC10] gi|329928511|ref|ZP_08282379.1| hydroxymethylbilane synthase [Paenibacillus sp. HGF5] gi|261281833|gb|ACX63804.1| porphobilinogen deaminase [Paenibacillus sp. Y412MC10] gi|328937770|gb|EGG34178.1| hydroxymethylbilane synthase [Paenibacillus sp. HGF5] Length = 318 Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats. Identities = 111/315 (35%), Positives = 168/315 (53%), Gaps = 14/315 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGG 60 + +G+R S LAL + L + K + + TKGDRI + TL+++GG Sbjct: 1 MRTIVVGSRQSALALTQTGQVIDDLKRLAKEHGLEYDFAVKKIVTKGDRILDVTLSKVGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ +I GEID AVHS KDMP+ L +GL A R+D RD IS +L D Sbjct: 61 KGLFVKEIEQAMIDGEIDMAVHSMKDMPSVLPEGLVSGAVPARKDPRDCLISKEGTTLDD 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR + L +R D+ + RG I++R+ K+ + AI+LA AG++R+ Sbjct: 121 LPQGAKVGTSSLRRSSQLKAYRPDLQIDWIRGNIDSRIRKMEEGEFQAIILATAGLQRMG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I L +E P+ GQGA+ IE N+ + L+ + N E T +V ER FL+EL Sbjct: 181 WEDRITSYLPVEVSLPAVGQGALGIECRENDEELLHLLSLYNDEVTARTVAAERKFLSEL 240 Query: 241 DGSCKSAIAGFAYCKG----------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 +G C+ I +A K + + G+V + DG+I + S G D +G Sbjct: 241 NGGCQVPIGAYAVMKNVEAGDSRGEQNVIQLTGMVGSPDGEIVLKESAEGT--DPEALGV 298 Query: 291 DAAQYIRFISNKNVF 305 + A ++ + + Sbjct: 299 EVAAKLKAKGAEKIL 313 >gi|325294749|ref|YP_004281263.1| Porphobilinogen deaminase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065197|gb|ADY73204.1| Porphobilinogen deaminase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 311 Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 174/306 (56%), Gaps = 6/306 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL + + + K P + +I ++TKGD+I + L +IG KGLF Sbjct: 2 KIRIGTRKSKLALWQSEWVKEQIEK--KFPEVEVELIKITTKGDKILDVPLAKIGDKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+EIE ++ GE+D AVHS KD+P+KL +GL++ A+ RED RD +S +L L Sbjct: 60 TKEIEDAMLKGEVDIAVHSLKDVPSKLPEGLKLIAFSDREDPRDALLSCGKYTLDTLPEG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRRKA L R D+ + D RG ++TR+ KL + AI+LA AG+KRL E Sbjct: 120 AVVGTSSLRRKAQLRILRPDLEIRDLRGNVDTRIRKLKEEQYDAIILAAAGVKRLGWENE 179 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-VINHEDTWDSVNCERAFLAELDGS 243 I EIL+ + PS QG + IE ++P+ + +VK IN ++ + ERAFL ++G Sbjct: 180 IDEILSSDKMIPSVSQGILGIEGREDDPEIERIVKEAINSRESEIAATVERAFLRTVEGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS---RNGNRCDAINIGRDAAQYIRFIS 300 C+ + +A + ++ + +G+ +++ + N +A +G A+ + Sbjct: 240 CQVPLGCYAVVVENRVHVRAFISDLNGRFYYKEEGVFKVENLEEADMVGTGVAERLLSAG 299 Query: 301 NKNVFN 306 K + + Sbjct: 300 GKKILD 305 >gi|303274460|ref|XP_003056550.1| porphobilinogen deaminase, chloroplast precursor [Micromonas pusilla CCMP1545] gi|226462634|gb|EEH59926.1| porphobilinogen deaminase, chloroplast precursor [Micromonas pusilla CCMP1545] Length = 376 Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats. Identities = 123/305 (40%), Positives = 180/305 (59%), Gaps = 4/305 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 +IGTR SPLALA A+ TR L + I + T GD++ ++ L +IGGKGL Sbjct: 63 VKIGTRGSPLALAQAYMTRDLLKKNFVELSEEGALEICIIKTTGDKVLDQPLADIGGKGL 122 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT E++ L+ G ID AVHS KD+PT L +G + LPRED+RD FIS L +L Sbjct: 123 FTRELDVALLDGRIDIAVHSMKDVPTYLPEGSILPCMLPREDVRDAFISVKYDDLSELPD 182 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GT+SLRR++ LL + ++FRG +++R+ KL LLA AG+ R+ + Sbjct: 183 GALVGTASLRRQSQLLAKFPTLKCVNFRGNVQSRIRKLQEGVVDCTLLAIAGLNRMDMTE 242 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +IL + P+ QGAI I + + E ++ +NHE+T +V CERAFLA LDGS Sbjct: 243 HATKILETDVMLPAVAQGAIGIACRTGDSRQLEFLEKLNHEETRIAVECERAFLASLDGS 302 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQYIRFISN 301 C++ IAG+AY G+ L F G+V + DGK E +R+ N DAI+ G+DA ++ ++ Sbjct: 303 CRTPIAGYAYKSGNNLEFRGLVASLDGKQILETTRSSNWSFTDAIDAGKDAGNELKALAP 362 Query: 302 KNVFN 306 F Sbjct: 363 SEFFE 367 >gi|194707246|gb|ACF87707.1| unknown [Zea mays] gi|223947939|gb|ACN28053.1| unknown [Zea mays] Length = 356 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 131/306 (42%), Positives = 183/306 (59%), Gaps = 5/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGL Sbjct: 48 IRIGTRGSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGL 107 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L Sbjct: 108 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPA 167 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+G++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RLK + Sbjct: 168 GSVVGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLKMAE 227 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+ Sbjct: 228 NATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVTCEREFLAVLDGN 287 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFIS 300 C++ IA +AY F G++ + DG E +R+G D + +G+DA ++ + Sbjct: 288 CRTPIAAYAYRDKDGNCSFRGLLSSPDGSKVFETARSGPYSFDDMVEMGKDAGHELKAKA 347 Query: 301 NKNVFN 306 F+ Sbjct: 348 GPGFFD 353 >gi|124514859|gb|EAY56370.1| Porphobilinogen deaminase [Leptospirillum rubarum] Length = 314 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 113/310 (36%), Positives = 162/310 (52%), Gaps = 7/310 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M P +IG+R S LAL A S + V + P I+ + T GD I +R L+E+GG Sbjct: 1 MLPTPLKIGSRGSELALWQARHVASLIESVSGVLP---EIVVIKTTGDIILDRQLSEVGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L+ EID AVHS KD+P L GL ++A L RED RDVF+S +K Sbjct: 58 KGLFVKEIEEALLRKEIDLAVHSMKDVPAFLPPGLTLAATLTREDPRDVFLSPHYPDIKS 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR A + R+D+ I RG + TR+ K+ AI+LA AG+ RL Sbjct: 118 LPQKARVGTSSLRRLAQIREIRNDLEFIPLRGNVGTRIRKMEEGVVDAIILAGAGLLRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++E ++ P+ GQGA+ +E ++ LV+ ++ E T SV ER L L Sbjct: 178 HANRVREWISPRVLLPAIGQGALGLEIRTDDETTGTLVRSLSDESTHLSVAAERGVLQSL 237 Query: 241 DGSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYI 296 +G C+ IA +A + + TL G VL G + DA +G D + Sbjct: 238 NGGCQVPIAAYAVWEKNRTLSLEGRVLDISGTRRIHARETRDIVTIDDAYQMGIDLGNRL 297 Query: 297 RFISNKNVFN 306 + + N Sbjct: 298 LSDGAEEILN 307 >gi|119357593|ref|YP_912237.1| porphobilinogen deaminase [Chlorobium phaeobacteroides DSM 266] gi|158512603|sp|A1BHD6|HEM3_CHLPD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|119354942|gb|ABL65813.1| porphobilinogen deaminase [Chlorobium phaeobacteroides DSM 266] Length = 313 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 118/308 (38%), Positives = 171/308 (55%), Gaps = 6/308 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK IGTR SPLAL A T++ L + P +I + + T GD + + L++IG Sbjct: 1 MKKQLIIGTRSSPLALWQAEFTKAELSRHY--PELDITLKLVKTTGDVLLDSPLSKIGDM 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT++IEK LI+ EID AVHS KD+PT +GL I+++ RED RDV IS + ++L +L Sbjct: 59 GLFTKDIEKHLIAKEIDLAVHSLKDVPTSTPEGLIITSFTEREDTRDVIISRSGETLLNL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++ I TSSLRR + LL R D + D RG + TR K + + A++LAYAG+ RLK Sbjct: 119 PQNARIATSSLRRMSQLLSMRPDFEICDIRGNLNTRFKKFDEGEFDAMMLAYAGVFRLKF 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I EIL + P+ GQGA+ IET V++ + +E+V+++NH +T ERA L L Sbjct: 179 SDRISEILPHDVMLPAVGQGALGIETRVDDEQTREIVRILNHSNTEYCCRAERALLRHLQ 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIR 297 G C+ I +A K TL V + +GKI + A G + A+ + Sbjct: 239 GGCQIPIGAYASFKNGTLKLLAFVGSVNGKIGLRNEITKTGLVSPEQAEEAGIELAKELL 298 Query: 298 FISNKNVF 305 + Sbjct: 299 KQGADEIL 306 >gi|71083016|ref|YP_265735.1| hydroxymethylbilane synthase [Candidatus Pelagibacter ubique HTCC1062] gi|71062129|gb|AAZ21132.1| hydroxymethylbilane synthase [Candidatus Pelagibacter ubique HTCC1062] Length = 307 Score = 245 bits (624), Expect = 7e-63, Method: Composition-based stats. Identities = 103/302 (34%), Positives = 174/302 (57%), Gaps = 1/302 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN-IVIIPLSTKGDRITNRTLTEIG 59 M+ + IG+R S LAL +A + R ++ K ++I + TKGD++ ++ L+E+G Sbjct: 1 MKNRKIIIGSRGSKLALIYAEKAREKILKHSKDFGIEEVIIKEIVTKGDQVQDKRLSEVG 60 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF++ IE +L+ +ID AVH+ KDMP++ +GL +L R D R++ IS + LK Sbjct: 61 GKGLFSKTIEVELLEKKIDIAVHALKDMPSEETRGLLTDCFLERNDPREILISKDNKHLK 120 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DLA +S+IGTSS RR+ + + R D++ RG ++TR+ KL N AI+L+YAGI L Sbjct: 121 DLASNSIIGTSSYRREFQIKKIRDDLNCKLIRGNVDTRIRKLKENLYDAIILSYAGIDSL 180 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I + + + P GQG I ++ N+ EL+K ++H+ T S+ ER L Sbjct: 181 GLNQNISQTFSTSEIIPCAGQGVIALQCRDNDESLIELLKQVDHQSTHSSIKAERNVLKV 240 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C++A+ FA +G+ + + + DG + + + A +G + + ++ + Sbjct: 241 LEGDCETAVGAFANIEGNKINLEVELFSLDGSKRFYLKSSESVNKAEELGIEMGKTLKKM 300 Query: 300 SN 301 SN Sbjct: 301 SN 302 >gi|91762559|ref|ZP_01264524.1| hydroxymethylbilane synthase [Candidatus Pelagibacter ubique HTCC1002] gi|91718361|gb|EAS85011.1| hydroxymethylbilane synthase [Candidatus Pelagibacter ubique HTCC1002] Length = 307 Score = 245 bits (624), Expect = 8e-63, Method: Composition-based stats. Identities = 103/302 (34%), Positives = 174/302 (57%), Gaps = 1/302 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN-IVIIPLSTKGDRITNRTLTEIG 59 M+ + IG+R S LAL +A + R ++ K ++I + TKGD++ ++ L+E+G Sbjct: 1 MKNRKIIIGSRGSKLALIYAEKAREKILKHSKDFGIEEVIIKEIVTKGDQVQDKRLSEVG 60 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF++ IE +L+ +ID AVH+ KDMP++ +GL +L R D R++ IS + LK Sbjct: 61 GKGLFSKTIEVELLEKKIDIAVHALKDMPSEETRGLLTDCFLERNDPREILISKDNKHLK 120 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DLA +S+IGTSS RR+ + + R D++ RG ++TR+ KL N AI+L+YAGI L Sbjct: 121 DLASNSIIGTSSYRREFQIKKIRDDLNCKLIRGNVDTRIRKLKENLYDAIILSYAGIDSL 180 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I + + + P GQG I ++ N+ EL+K ++H+ T S+ ER L Sbjct: 181 GLNQNISQTFSTSEIIPCAGQGVIALQCRDNDESLIELLKQVDHQSTHSSIKAERNVLKV 240 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C++A+ FA +G+ + + + DG + + + A +G + + ++ + Sbjct: 241 LEGDCETAVGAFANIEGNKINLEVELFSLDGSKRFYLKSSESVDKAEELGIEMGKTLKKM 300 Query: 300 SN 301 SN Sbjct: 301 SN 302 >gi|254366979|ref|ZP_04983015.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella tularensis subsp. holarctica 257] gi|134252805|gb|EBA51899.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Francisella tularensis subsp. holarctica 257] Length = 300 Score = 245 bits (624), Expect = 8e-63, Method: Composition-based stats. Identities = 107/304 (35%), Positives = 166/304 (54%), Gaps = 5/304 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I + S LAL ++ + IP I + T+GD I ++ L +IGGK Sbjct: 1 MKQITIASGESKLALWQTNFVKNRIQSELNIP---CEISTMKTQGDIILDQPLNKIGGKA 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E ++S + D AVHS KD+P +L +G ++ ++PRED RD F+S+ S+ DL Sbjct: 58 LFMKELEVAMLSNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLP 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRRKA LL +R D+ + D RG I+TRL+KL+N AI+LA AG+ RL+ Sbjct: 118 KGAVVGTSSLRRKAQLLHYRDDLEIRDLRGNIQTRLSKLDNGDYDAIILASAGLIRLELV 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I + + +E P+ GQG + IE + E ++ +N ++ ERAF EL G Sbjct: 178 ERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C AI +A + + +V +SDGK + G+ D +G+ AQ + + Sbjct: 238 GCHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGD--DPTKLGKLLAQEMIALGAY 295 Query: 303 NVFN 306 + Sbjct: 296 KILE 299 >gi|46907786|ref|YP_014175.1| porphobilinogen deaminase [Listeria monocytogenes serotype 4b str. F2365] gi|47093092|ref|ZP_00230869.1| porphobilinogen deaminase [Listeria monocytogenes str. 4b H7858] gi|226224157|ref|YP_002758264.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Listeria monocytogenes Clip81459] gi|254824385|ref|ZP_05229386.1| porphobilinogen deaminase [Listeria monocytogenes FSL J1-194] gi|254852180|ref|ZP_05241528.1| porphobilinogen deaminase [Listeria monocytogenes FSL R2-503] gi|254931496|ref|ZP_05264855.1| porphobilinogen deaminase [Listeria monocytogenes HPB2262] gi|254993453|ref|ZP_05275643.1| porphobilinogen deaminase [Listeria monocytogenes FSL J2-064] gi|300764778|ref|ZP_07074768.1| porphobilinogen deaminase [Listeria monocytogenes FSL N1-017] gi|55976452|sp|Q71ZB2|HEM3_LISMF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|259647801|sp|C1KVK3|HEM3_LISMC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|46881055|gb|AAT04352.1| porphobilinogen deaminase [Listeria monocytogenes serotype 4b str. F2365] gi|47018532|gb|EAL09288.1| porphobilinogen deaminase [Listeria monocytogenes str. 4b H7858] gi|225876619|emb|CAS05328.1| Putative porphobilinogen deaminase (hydroxymethylbilane synthase) [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605484|gb|EEW18092.1| porphobilinogen deaminase [Listeria monocytogenes FSL R2-503] gi|293583048|gb|EFF95080.1| porphobilinogen deaminase [Listeria monocytogenes HPB2262] gi|293593620|gb|EFG01381.1| porphobilinogen deaminase [Listeria monocytogenes FSL J1-194] gi|300514454|gb|EFK41511.1| porphobilinogen deaminase [Listeria monocytogenes FSL N1-017] gi|328465591|gb|EGF36820.1| porphobilinogen deaminase [Listeria monocytogenes 1816] gi|332311998|gb|EGJ25093.1| Porphobilinogen deaminase [Listeria monocytogenes str. Scott A] Length = 309 Score = 245 bits (624), Expect = 8e-63, Method: Composition-based stats. Identities = 114/307 (37%), Positives = 167/307 (54%), Gaps = 7/307 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK Sbjct: 1 MKRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF E+E+ L ID AVHS KD+P+ L +GL I A RE D F+ + SL +L Sbjct: 59 GLFVSEVEQALSDEVIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNRVNSLDEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SVIGTSSLRR A LL+ R D + RG I+TRL KL+ AI+LA AG+ R+ Sbjct: 119 PQGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL Sbjct: 179 LENTTLKLEDIPPELCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLK 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +L+G C+ IAGFA ++F G+V +DG I + G + IG A+ + Sbjct: 239 KLNGGCEIPIAGFATRANEVVHFKGLVGNADGSIILASEQAG--ANPSEIGNKVAEDLLS 296 Query: 299 ISNKNVF 305 + Sbjct: 297 EGADTII 303 >gi|206603978|gb|EDZ40458.1| Porphobilinogen deaminase [Leptospirillum sp. Group II '5-way CG'] Length = 314 Score = 245 bits (624), Expect = 9e-63, Method: Composition-based stats. Identities = 113/310 (36%), Positives = 164/310 (52%), Gaps = 7/310 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M P +IG+R S LAL A S + V I P I+ + T GD I +R L+E+GG Sbjct: 1 MSLMPLKIGSRGSELALWQARHVASMIESVSGILP---EIVVIKTTGDIILDRQLSEVGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L+ EID AVHS KD+P L GL ++A L RED RDVF+S +K Sbjct: 58 KGLFVKEIEEALLRKEIDLAVHSMKDVPAFLPPGLTLAATLKREDPRDVFLSPHYPDIKS 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR A + +RSD+ I RG + TR+ K+ + AI+LA AG+ RL Sbjct: 118 LPHKARVGTSSLRRLAQIREFRSDLEFIPLRGNVGTRIRKMEDGVVEAIILAGAGLLRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++E ++ + P+ GQGA+ +E ++ L++ ++ E T SV ER L L Sbjct: 178 HANRVREWISPQVLLPAIGQGALGLEIRTDDETTGTLIRSLSDESTHLSVAAERGVLQSL 237 Query: 241 DGSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYI 296 +G C+ IA +A + + TL G VL G +A +G D + Sbjct: 238 NGGCQVPIAAYAVWEKNRTLSLEGRVLDISGTRRIHARETRDIATIDEAYQMGMDLGNRL 297 Query: 297 RFISNKNVFN 306 + + N Sbjct: 298 LADGAEEILN 307 >gi|170749246|ref|YP_001755506.1| porphobilinogen deaminase [Methylobacterium radiotolerans JCM 2831] gi|170655768|gb|ACB24823.1| porphobilinogen deaminase [Methylobacterium radiotolerans JCM 2831] Length = 307 Score = 245 bits (624), Expect = 9e-63, Method: Composition-based stats. Identities = 122/291 (41%), Positives = 174/291 (59%), Gaps = 2/291 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +P RIGTR SP+ALA R ++ + P ++ ++T D+I +R L+EIGG Sbjct: 1 MLNRPLRIGTRGSPMALAQTGMVRDRIVAAN--PGLETELVVVTTVADKILDRPLSEIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ L +GE+D AVHS KD+ T L GL I+ L R+D RD F+S A L Sbjct: 59 KGLFTKELEQALFAGEVDVAVHSMKDVETWLPDGLTIACILERDDPRDAFLSPHADGLAG 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LA + +GTSSLRR A +L R D+ V+ RG TR+ KL + A LLA AG++RL Sbjct: 119 LAAGARVGTSSLRRGAQVLMRRPDLRVVPLRGNANTRMRKLEAGECDATLLALAGLQRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E + + +L++E+ P+ QGA+ IE ++ ++L+ I E T +V+ ERA LAEL Sbjct: 179 LESMARSVLSVEEMLPAVAQGALGIECRADDAVIRDLLAPIACERTTVAVSAERALLAEL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 DGSC++ IA A G +L G++ DG SR G +A IGR+ Sbjct: 239 DGSCRTPIAALAQIDGDSLRIDGLLFLPDGSRHWAASRQGLVAEAERIGRE 289 >gi|189346422|ref|YP_001942951.1| porphobilinogen deaminase [Chlorobium limicola DSM 245] gi|238058917|sp|B3EIN1|HEM3_CHLL2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189340569|gb|ACD89972.1| porphobilinogen deaminase [Chlorobium limicola DSM 245] Length = 313 Score = 245 bits (624), Expect = 9e-63, Method: Composition-based stats. Identities = 120/308 (38%), Positives = 170/308 (55%), Gaps = 6/308 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG Sbjct: 1 MKKQLIIGTRSSPLALWQAEFTKAELSR--HFPELDITLKLVKTTGDVLLDSPLSKIGDM 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT++IEK LI+ EID AVHS KD+PT +GL I+++ RED RDV IS L DL Sbjct: 59 GLFTKDIEKHLIAKEIDLAVHSLKDVPTSTPEGLIITSFTEREDTRDVIISKGGAKLADL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 L++ + TSSLRR + L R D + D RG + TR K + + A++LAYAG+ RL Sbjct: 119 PLNAKVATSSLRRMSQLKSLRPDFEICDIRGNLNTRFKKFDEGEFDAMMLAYAGVFRLNF 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I EIL E P+ GQGA+ IET V++ + +E+V+++NH +T ERA L L Sbjct: 179 SDRISEILPHEIMLPAVGQGALGIETRVDDEQTREIVRILNHSNTEYCCKAERALLRHLQ 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFH--EVSRNG--NRCDAINIGRDAAQYIR 297 G C+ I +A K TL V + DG + E++R+G + A G A+ + Sbjct: 239 GGCQIPIGAYASFKNGTLKLLAFVGSVDGTVGINNEITRSGLTSPDQAEEAGIALAEELL 298 Query: 298 FISNKNVF 305 + Sbjct: 299 KQGADKIL 306 >gi|194017264|ref|ZP_03055876.1| porphobilinogen deaminase [Bacillus pumilus ATCC 7061] gi|194011132|gb|EDW20702.1| porphobilinogen deaminase [Bacillus pumilus ATCC 7061] Length = 311 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 177/306 (57%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + ++G+R S LA+ L +++ P ++ I + TKGD+I + TL+++GGKG Sbjct: 1 MRTIKVGSRRSKLAITQTKWVIQKLSELN--PSYSFEIKEIVTKGDQILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ +++ +ID AVHS KDMP L +GL I RED+RD IS L +L Sbjct: 59 LFVKEIEQAMLNHDIDMAVHSMKDMPAALPEGLVIGCIPEREDVRDALISKDHLRLHELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL+ R D+++ RG I+TRL KL N + AI+LA AG+ R+ Sbjct: 119 KGAIVGTSSLRRSAQLLQERPDLNIKWIRGNIDTRLEKLKNEEYDAIILAAAGLSRMGWS 178 Query: 183 KVIK-EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 K + E L+ E P+ GQGA+ IE ++ + +L+ +E T +V ERAFL ++D Sbjct: 179 KEVVSEFLSPETCLPAVGQGALSIECRGDDEELLQLLAQFTNEYTKKTVLAERAFLKQMD 238 Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ IAG+A + G+V ++DG + +G+ D IG A+ + Sbjct: 239 GSCQVPIAGYATINERDEIELTGLVASADGHTIIRETVSGS--DPEAIGTACAKQMADKG 296 Query: 301 NKNVFN 306 K++ + Sbjct: 297 AKDLID 302 >gi|313199811|ref|YP_004038469.1| porphobilinogen deaminase [Methylovorus sp. MP688] gi|312439127|gb|ADQ83233.1| porphobilinogen deaminase [Methylovorus sp. MP688] Length = 320 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 103/301 (34%), Positives = 154/301 (51%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A ++ L ++ P + I+ ++T GD+I + L IGGKGLF Sbjct: 12 KLVIASRESALAMWQARHIQARLQALY--PSTQVEILGMTTTGDQILDSPLARIGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E+ L G D AVHS KD+P L +G ++A RED RD F+S+ SL+ L Sbjct: 70 VKELEQALADGRADLAVHSMKDVPMHLPEGFAMAAIGEREDPRDAFVSNDYPSLEALPAG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S++GTSSLRR++ L + + RG ++TRL KL+ + AI+LA AG+ RL Sbjct: 130 SIVGTSSLRRQSQLQARFPHLVIESLRGNLQTRLRKLDEGQYAAIILAAAGLIRLGLGNR 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + + ED P+ GQGA+ IE + ++ +NH DT V ER L GSC Sbjct: 190 IAQTIAPEDSIPAVGQGALGIEINAARTDLLTVLAPLNHADTAACVEAERGMSRALAGSC 249 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A G + +G V + DGK GN +G+ AQ + + Sbjct: 250 TVPLGAYATKLGENITIHGFVASVDGKQMLRAEATGNAAKPELLGQQLAQSLIARGADKI 309 Query: 305 F 305 Sbjct: 310 L 310 >gi|84516581|ref|ZP_01003940.1| porphobilinogen deaminase [Loktanella vestfoldensis SKA53] gi|84509617|gb|EAQ06075.1| porphobilinogen deaminase [Loktanella vestfoldensis SKA53] Length = 314 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 134/302 (44%), Positives = 179/302 (59%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 PF IGTR SPLALA A ETR+ LM +P I+ + GD I +R L +IGGKGLF Sbjct: 11 PFNIGTRGSPLALAQAHETRARLMAAFDLPQDAFAIVVIKVMGDAIQDRALKDIGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE L+ G ID AVHS KDMP + GL + YLPRED+RD F+S TA+ L DL Sbjct: 71 TREIEDALLDGSIDIAVHSMKDMPVEQPSGLLLDTYLPREDVRDAFVSLTARGLDDLEHG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR++ LL R D++V++FRG ++TRL KL N A A LA AG+ RL V Sbjct: 131 ATVGTSSLRRRSQLLVRRPDLNVVEFRGNVQTRLMKLGNGVAEATFLAMAGLNRLNMTDV 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + ED P+ QGAI IE ++ +A +++ I+H T + ER+FLA LDGSC Sbjct: 191 PRTAIAPEDMLPAIAQGAIGIERRADDSRAAAMLEAIHHGPTGQRLAAERSFLAHLDGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 ++ I G A G TL G +L +DG G D ++GR+ A + + Sbjct: 251 QTPIGGLADLDGGTLRLRGEILRTDGSQVLADDMIGAIADGADMGREMAVKLLEKAGPGF 310 Query: 305 FN 306 F+ Sbjct: 311 FD 312 >gi|224081346|ref|XP_002306378.1| predicted protein [Populus trichocarpa] gi|222855827|gb|EEE93374.1| predicted protein [Populus trichocarpa] Length = 363 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 138/307 (44%), Positives = 187/307 (60%), Gaps = 6/307 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR LM H I I+ + T GD+I ++ L +IGGKGL Sbjct: 56 IRIGTRGSPLALAQAHETRDKLMASHAELAEDGAIQIVIIKTTGDKILSQPLADIGGKGL 115 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A SL DL Sbjct: 116 FTKEIDEALINGDIDIAVHSMKDVPTYLPEMTILPCNLPREDVRDAFISMSATSLADLPA 175 Query: 124 HSVIGTSSLRRKALLLRWRSDISV-IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S++GT+SLRRK+ +L +SV +FRG ++TRL KLN A LLA AG+KRL Sbjct: 176 GSIVGTASLRRKSQILHRFPSLSVEENFRGNVQTRLRKLNEGVVKATLLALAGLKRLNMT 235 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + IL I+D P+ QGAI I ++ K + +NHE+T +V CERAFL LDG Sbjct: 236 ENVTSILPIDDMLPAVAQGAIGIACRDSDDKMANYLASLNHEETRLAVACERAFLETLDG 295 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFI 299 SC++ IAG+A + F G+V + DG + SR G D I +G+DA + + Sbjct: 296 SCRTPIAGYARRDENGDCIFKGLVASPDGTRVLKTSRKGPYAFDDMIAMGKDAGKELLSQ 355 Query: 300 SNKNVFN 306 + F+ Sbjct: 356 AGPGFFD 362 >gi|255640018|gb|ACU20300.1| unknown [Glycine max] Length = 356 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 142/306 (46%), Positives = 186/306 (60%), Gaps = 6/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A+ETR LM H I I+ + T GD+I + L +IGGKGL Sbjct: 49 IRIGTRGSPLALAQAYETRDKLMASHPDLAEEGAIEIVIIKTTGDKILTQPLADIGGKGL 108 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ L++ EID AVHS KD+PT L + LPRED+RD FIS TA SL DL Sbjct: 109 FTKEIDEALLNSEIDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLTAASLADLPP 168 Query: 124 HSVIGTSSLRRKALL-LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SVIGT+SLRRK+ + R+ S +FRG ++TRL KLN A LLA AG+KRL Sbjct: 169 ASVIGTASLRRKSQILHRYPSLNVQENFRGNVQTRLRKLNEGVVQATLLALAGLKRLSMT 228 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + IL+I+D P+ QGAI I ++ K E + +NHE+T +V CERAFL LDG Sbjct: 229 ENVTSILSIDDMLPAVAQGAIGIACRSDDDKMAEYIDSLNHEETRLAVVCERAFLQTLDG 288 Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFI 299 SC++ IAG+A + F G+V + DG E SR G D I +G+DA + + Sbjct: 289 SCRTPIAGYACRNEDGNCLFRGLVASPDGTRVLETSRVGPYAVEDMIEMGKDAGKELLSR 348 Query: 300 SNKNVF 305 + N F Sbjct: 349 AGPNFF 354 >gi|220921724|ref|YP_002497025.1| porphobilinogen deaminase [Methylobacterium nodulans ORS 2060] gi|219946330|gb|ACL56722.1| porphobilinogen deaminase [Methylobacterium nodulans ORS 2060] Length = 318 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 114/304 (37%), Positives = 175/304 (57%), Gaps = 2/304 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEI 58 M +P RIGTR SP+ALA R + H P + ++ ++T D++ +R L+ I Sbjct: 8 MVHRPLRIGTRGSPMALAQTGMVRDRIAAAHPHLAEPGAMELVVVNTVADKVLDRPLSAI 67 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLFT+E+E+ L +GEID AVHS KD+ T L GL I++ L R+D RD F+S A+SL Sbjct: 68 GGKGLFTKELEQALFAGEIDLAVHSMKDVETWLPDGLVIASILERDDPRDAFLSLKARSL 127 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L S +GTSSLRR A +L R D+ ++ RG TR+ +L A LLA AG++R Sbjct: 128 AELPAGSRVGTSSLRRGAQVLMRRPDLQIVPLRGNANTRIRRLEEGACDATLLAIAGLER 187 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + +E++ + P+ QGA+ IE + + +L++ + T ++ ER LA Sbjct: 188 LGLAHLAQEVMGTDTMLPAVAQGALGIECRAADQELIDLLQAVACPRTTTALAAERGLLA 247 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 ELDGSC++ IA A +G L G++ DG +R+G +A IG++A ++ Sbjct: 248 ELDGSCRTPIAALAEIEGDRLTLNGLLFLPDGSAHWATTRSGPAAEAAAIGKEAGADLKA 307 Query: 299 ISNK 302 + + Sbjct: 308 QAGE 311 >gi|78189475|ref|YP_379813.1| porphobilinogen deaminase [Chlorobium chlorochromatii CaD3] gi|123757008|sp|Q3AQF5|HEM3_CHLCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78171674|gb|ABB28770.1| Porphobilinogen deaminase [Chlorobium chlorochromatii CaD3] Length = 313 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 116/308 (37%), Positives = 165/308 (53%), Gaps = 6/308 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK IGTR SPLAL A T++ L + P I + + T GD + + L++IG Sbjct: 1 MKKQLIIGTRSSPLALWQAEFTKAELSKHY--PDMEITLKLVKTTGDVLLDSPLSKIGDM 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT++IEK L++ EID AVHS KD+PT +GL I+++ RED RDV IS LKDL Sbjct: 59 GLFTKDIEKHLLAREIDLAVHSLKDVPTSTPEGLIITSFTEREDTRDVIISKGGVKLKDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++ + TSSLRR + LL R D+ + D RG + TR K ++ + A++LAYAG+ RL Sbjct: 119 PPNARMATSSLRRMSQLLSVRPDLDIRDIRGNLNTRFQKFDDGEFDAMMLAYAGVYRLNF 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I EIL + P+ GQGA+ IET V++ + +E+V+++NH T ERA L L Sbjct: 179 SDRISEILPHDMMLPAVGQGALGIETRVDDEQTREIVRILNHSTTEYCCRAERALLRHLQ 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIR 297 G C+ I +A TL V + DGK + A G A+ + Sbjct: 239 GGCQIPIGAYATFSNGTLKLLAFVGSVDGKTALRNEITKTGLTSPEQAEEAGIALAEELL 298 Query: 298 FISNKNVF 305 + Sbjct: 299 KQGADAIL 306 >gi|209965647|ref|YP_002298562.1| porphobilinogen deaminase [Rhodospirillum centenum SW] gi|209959113|gb|ACI99749.1| porphobilinogen deaminase [Rhodospirillum centenum SW] Length = 323 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 132/307 (42%), Positives = 179/307 (58%), Gaps = 3/307 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIG 59 K+P RIGTR SPLALA A ETR L + H P I I+ + T GDRI +RTL E G Sbjct: 1 MKQPLRIGTRGSPLALAQAHETRRRLAEAHPHLAEPDAIEIVVIKTTGDRILDRTLMEAG 60 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLFT+EIE+ L + ID AVHS KD+PT GLQ++A LPRED RD + L Sbjct: 61 GKGLFTKEIEEALQAETIDLAVHSMKDVPTWRQTGLQLTAMLPREDPRDAWFCRHGCGLD 120 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +V+GT+SLRR+A +L R D+ V+ FRG ++TR+ KL + A LLA AG++RL Sbjct: 121 ELPAGAVVGTASLRRQAQILARRPDLKVVPFRGNVQTRMTKLAEGQVDATLLALAGLRRL 180 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + + + P+ QGAI IET + LV +NH +T V ER LA Sbjct: 181 GLVEHMTAAIETDVMLPAVAQGAIGIETRAADDVTNALVAALNHAETMTRVTAERGVLAT 240 Query: 240 LDGSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 LDGSC++ IA A G +L +V+ +G+ F+ R G+ DA +G DA Q ++ Sbjct: 241 LDGSCRTPIAALAELPGDGSLTLSALVIRPNGQEFYRTERRGDPDDAEAMGIDAGQELKA 300 Query: 299 ISNKNVF 305 + F Sbjct: 301 KLPPDFF 307 >gi|310643595|ref|YP_003948353.1| phosphate abc transporter, atpase subunit [Paenibacillus polymyxa SC2] gi|309248545|gb|ADO58112.1| Phosphate ABC transporter, ATPase subunit [Paenibacillus polymyxa SC2] Length = 308 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 166/305 (54%), Gaps = 4/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGG 60 + +G+R S LAL L + + VI + TKGDRI + TL+++GG Sbjct: 1 MRTIVVGSRQSALALTQTGHVIEDLNALCAEHGLDLQFVIKKILTKGDRILDVTLSKVGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ +++GEID AVHS KDMP++L +GL A RED RD I+ A+SL+D Sbjct: 61 KGLFVKEIEQAMLAGEIDMAVHSMKDMPSELPEGLVNGAVPRREDPRDCLITLGAKSLED 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR + + R D+ + RG I++RL KL AI+LA AG+ R+ Sbjct: 121 LPSGAKVGTSSLRRASQIKSMRPDLQLEPVRGNIDSRLKKLETEGFDAIILAAAGLHRMG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I + E P+ GQGA+ IE ++ + L+++ NH+DT +V ER FL L Sbjct: 181 WKDRITSYIPEEACLPAVGQGALGIECRASDEELLALLRLYNHQDTSATVEAERTFLGVL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I A G + G+V + DG++ + + G D +G A + Sbjct: 241 NGGCQVPIGAHAVWAGQEISLTGMVGSPDGEVILKETLQG--NDPQKLGEAVAASLIAKG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AEQIL 303 >gi|255070965|ref|XP_002507564.1| hydroxymethylbilane synthase [Micromonas sp. RCC299] gi|226522839|gb|ACO68822.1| hydroxymethylbilane synthase [Micromonas sp. RCC299] Length = 353 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 122/304 (40%), Positives = 177/304 (58%), Gaps = 4/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 +IGTR SPLALA A+ TR L ++ + I + T GD++ ++ L +IGGKGL Sbjct: 40 IKIGTRGSPLALAQAYMTRDLLKASFPELGNDGALEICIIKTTGDKVLDQPLADIGGKGL 99 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT E++ L+ G ID AVHS KD+PT L +G + LPRED+RD FIS L +L Sbjct: 100 FTRELDVALLDGRIDIAVHSMKDVPTYLPEGTILPCMLPREDVRDAFISVKYDDLSELPE 159 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S++GT+SLRR++ LL + ++FRG +++R+ KL LLA AG+ R+ + Sbjct: 160 GSLVGTASLRRQSQLLARFPGLKCVNFRGNVQSRIRKLQEGVVDCTLLAIAGLNRMDMTQ 219 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +IL+++ P+ QGAI I + K ++ +NHE+T +V CER+FLA LDGS Sbjct: 220 HATKILDVDVMLPAVAQGAIGIACRTGDSKQITYLESLNHEETRIAVECERSFLAALDGS 279 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFISN 301 C++ IAGFA G L F G+V A DG E SR + DAI G++A ++ + Sbjct: 280 CRTPIAGFARKDGDNLRFNGLVAALDGSEILETSRVTKWSYADAIAAGKEAGAELKKKAP 339 Query: 302 KNVF 305 F Sbjct: 340 AEFF 343 >gi|298707417|emb|CBJ30046.1| hydroxymethylbilane synthase, putative chloroplast precursor [Ectocarpus siliculosus] Length = 373 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 127/299 (42%), Positives = 188/299 (62%), Gaps = 2/299 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 IGTR SPLALA A+ETR L + + I + T GD I ++ LTEIGGKGL Sbjct: 59 LTIGTRGSPLALAQAYETRKRLGEQFDELKEEGAVAIQVIKTSGDMILDKPLTEIGGKGL 118 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E++ +L++ ++D VHS KD+PT ++ G + LPRED D FIS+ A ++ L Sbjct: 119 FTKELDVQLLNKDVDICVHSMKDVPTWIVPGTILPCNLPREDTSDAFISNKADNIASLPD 178 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SVIG++SLRR+A LLR V++FRG ++TRL KL+ A LLA+AG+KRL+ + Sbjct: 179 GSVIGSASLRRQAQLLRANPTFKVVNFRGNVQTRLRKLDEEIVDATLLAFAGLKRLEMAQ 238 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V +L+ + P+ QGAI I+ N+P ++ + + H++T +V+CERAFLA LDG+ Sbjct: 239 VATSVLDQDAMLPAVAQGAIGIQCRENDPTFEKYLAGLCHQETKTAVDCERAFLAALDGN 298 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 CK+ IAG A +G L F G++ + DGK F++ +R G DA+ +G DA ++ + Sbjct: 299 CKTPIAGQARMEGEKLVFRGLIASPDGKQFYDTTREGKPEDAVAMGHDAGMELKKRAGP 357 >gi|34557903|ref|NP_907718.1| porphobilinogen deaminase [Wolinella succinogenes DSM 1740] gi|55976472|sp|Q7M8L2|HEM3_WOLSU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|34483621|emb|CAE10618.1| PORPHOBILINOGEN DEAMINASE [Wolinella succinogenes] Length = 311 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 163/305 (53%), Gaps = 5/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 IGTR S LAL A ++ L H+ ++ + + TKGD+I + L ++GGKG Sbjct: 1 MNKIIIGTRGSVLALWQAEYVKAELERAHE--GLSVELKIVKTKGDKILDVPLAKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E+ ++ GEID AVHS KD+P +L++GL +SA RED+RD F+S SL+ L Sbjct: 59 LFTKELEEMMLQGEIDLAVHSLKDVPVELIEGLTLSAITEREDVRDCFLSDKYASLETLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 L + +GT+SLRR + RSD+ RG ++TR+ +L AI+LA AG+ RL Sbjct: 119 LGAKVGTTSLRRSMQIKSMRSDLDTESLRGNVQTRIKRLKEGDFDAIILATAGVNRLDLW 178 Query: 183 KVIKE--ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K + ++ E P+ GQ A+ IE +A L +++ + ER F+ L Sbjct: 179 KEVNYVIPIDTEMMIPAMGQAALGIECK-EGSEAFRLTQILEDKKARIETTAEREFVRVL 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I AY +G TL+ V DG + + +A+ +GR+ A + Sbjct: 238 EGGCQVPIGANAYLEGETLHLKVAVGLPDGSEILMDRLSAPKGEAVRLGRELAARLIAKG 297 Query: 301 NKNVF 305 + + Sbjct: 298 ARELL 302 >gi|46199940|ref|YP_005607.1| porphobilinogen deaminase [Thermus thermophilus HB27] gi|55980314|ref|YP_143611.1| porphobilinogen deaminase [Thermus thermophilus HB8] gi|55976454|sp|Q72H57|HEM3_THET2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|81600541|sp|Q5SLE8|HEM3_THET8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|46197567|gb|AAS81980.1| porphobilinogen deaminase [Thermus thermophilus HB27] gi|55771727|dbj|BAD70168.1| porphobilinogen deaminase [Thermus thermophilus HB8] Length = 301 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 109/304 (35%), Positives = 163/304 (53%), Gaps = 8/304 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +GTR S LALA L + P I + T+GD+ + I Sbjct: 1 MRVVVVGTRGSALALAQTRFVVERLKE--TWPETEFKIRTIKTRGDQGASPREEAI---- 54 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 F +EI++ L+S EID AVHS KD+PT+ +GL+I++ R+D RDVF+ A+ LKDL Sbjct: 55 -FVKEIQEALLSREIDIAVHSLKDLPTESPRGLKIASVPRRQDPRDVFLGKAAKRLKDLP 113 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSS+RRKA +L R D+ V D RG ++TRL L N + I+LA AG+ RL Sbjct: 114 PGAVVGTSSVRRKAQILALRPDLVVRDLRGNVDTRLAALGNGEYDGIVLAAAGLIRLDLR 173 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E L+ + P+PGQGA+ +E + A+EL ++H ++ V ERAFL L Sbjct: 174 NRIDEFLDPGEVLPAPGQGALALEVREGDDLAEELCYALHHPPSYHRVRAERAFLRGLGA 233 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C + + A+ + TL G++L DGK F G+ +A +G D A+ + Sbjct: 234 GCLAPVGALAHVEEDGTLRLEGVLLTPDGKSFIRAEIEGDVSEAEELGLDLARDVLEQGG 293 Query: 302 KNVF 305 + + Sbjct: 294 REIL 297 >gi|218885688|ref|YP_002435009.1| porphobilinogen deaminase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226740632|sp|B8DKW2|HEM3_DESVM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|218756642|gb|ACL07541.1| porphobilinogen deaminase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 317 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 114/308 (37%), Positives = 159/308 (51%), Gaps = 7/308 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR S LAL A +S + H P ++ ++ L T+GD I + L ++GGKG Sbjct: 1 MKKLVIATRGSKLALWQAEHVKSCIEGQH--PGVSVELLVLKTRGDIILDVPLAKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L+ G D AVHS KD+P +L +GL + RE+ D F+S SL L Sbjct: 59 LFVKEIEEALLDGRADLAVHSMKDVPMELPEGLVLGIIPEREEPSDTFLSVHHDSLAALP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR++ LL R D++V+ RG ++TRL KL+ + AI++A AG+KRL Sbjct: 119 HGATVGTSSLRRQSQLLALRPDLNVVSLRGNVDTRLRKLSEGQFDAIIMATAGMKRLGLS 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 E+L F P+ GQGA+ IE + EL+ + H T V ER FLA L G Sbjct: 179 APRSEVLGPPAFLPAVGQGALGIEFRADRADLHELLAFMEHTPTRIRVEAERGFLAGLQG 238 Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIR 297 C+ IAG A G T G+V G + NG + A IG D A + Sbjct: 239 GCQVPIAGHAVMTGDGTFALEGLVADLTGARVIRRTMNGVSAPDGAQARQIGLDLAAQLV 298 Query: 298 FISNKNVF 305 + Sbjct: 299 ADGAGEIL 306 >gi|254452699|ref|ZP_05066136.1| porphobilinogen deaminase [Octadecabacter antarcticus 238] gi|198267105|gb|EDY91375.1| porphobilinogen deaminase [Octadecabacter antarcticus 238] Length = 321 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 119/306 (38%), Positives = 174/306 (56%), Gaps = 4/306 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD----RITNRTLTEIGG 60 P +IGTR SPLALA A ETR+ LM +P + + T GD + L IG Sbjct: 11 PLKIGTRGSPLALAQAHETRARLMIAFDLPESAFEVCVIKTSGDDRSLIDADIPLKVIGN 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+EIE+ +++G ID AVHS KDMP GL ++ +LPRED RD F+S + D Sbjct: 71 KGLFTKEIEEAMLAGRIDIAVHSTKDMPVAQPDGLVLNVFLPREDARDAFVSVKYAGIAD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GTSSLRR+A LL R D++V++FRG ++TRL KL + A A LA AG+ R+ Sbjct: 131 LPEGAIVGTSSLRRRAQLLVKRPDLTVVEFRGNVQTRLKKLADGLADATFLAMAGLNRMG 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++++D P+ QG I IE V++ +A++++ I++ + ERAFLA L Sbjct: 191 MHDAAIGAIDLDDMLPAIAQGTISIERRVDDLRARDMLAAIHNVQAGQQMAAERAFLAAL 250 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A ++ G +L DG R G + +G + AQ + + Sbjct: 251 DGSCETPIAGLAMIDCDQMWLRGEILKPDGSQVFTGERRGLVSEGAAMGMELAQELLGQA 310 Query: 301 NKNVFN 306 + F Sbjct: 311 GPDFFE 316 >gi|302391331|ref|YP_003827151.1| hydroxymethylbilane synthase [Acetohalobium arabaticum DSM 5501] gi|302203408|gb|ADL12086.1| hydroxymethylbilane synthase [Acetohalobium arabaticum DSM 5501] Length = 314 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 106/307 (34%), Positives = 162/307 (52%), Gaps = 4/307 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ IGTR S LA+ A L + + + + TKGD+I + L+++GG Sbjct: 1 MKGNKVIIGTRSSDLAVGQAEIVAEMLGKA--VSEYEFELEKIKTKGDKILDSPLSQVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ EID AVHS KDMP +L +GL + + R D RD +S+ ++L + Sbjct: 59 KGLFIKELEVSLLEEEIDLAVHSMKDMPAELPEGLAVLGFPERVDSRDALVSNGDRNLDE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKR 178 L + IGT SLRR + LL +R D+ V+ RG I TRL KL AI+LA AG+ R Sbjct: 119 LPTGARIGTGSLRRTSQLLNYRPDLEVVPIRGNINTRLEKLTAEELNLDAIVLAAAGLIR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + I E L+ E P+ GQGA+ IE ++ + + L+ I+ + T + ER FL Sbjct: 179 MGWKDKITEYLDDEVMLPAAGQGALAIEAREDDEEIKTLINKIDDQRTRYILQAERGFLE 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 LDG C+ I A +G + G+V DG+ G+ +A +G + A+ + Sbjct: 239 RLDGDCQVPIGALAEIEGEEITLEGMVATLDGQKHLRDQITGSVGEAEELGIELAEELIA 298 Query: 299 ISNKNVF 305 + + Sbjct: 299 KGAEKIL 305 >gi|302756929|ref|XP_002961888.1| hypothetical protein SELMODRAFT_164683 [Selaginella moellendorffii] gi|300170547|gb|EFJ37148.1| hypothetical protein SELMODRAFT_164683 [Selaginella moellendorffii] Length = 353 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 130/309 (42%), Positives = 187/309 (60%), Gaps = 7/309 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A++TR L H + I+ + T GD+I N+ L +IGGKGL Sbjct: 44 IRIGTRGSPLALAQAYQTRDLLKGAHPELAEDGALEIVIIKTTGDKILNQPLADIGGKGL 103 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ ID AVHS KD+PT L +G + L RED RD FIS A+SL +L Sbjct: 104 FTKEIDDALLDNRIDIAVHSMKDVPTYLPQGTILPCNLRREDARDAFISLKAKSLAELPP 163 Query: 124 HSVIGTSSLRRKALLLRWRSDISVI-DFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SV+GT+SLRRK+ +L+ + V +FRG ++TRL KL A LLA AG+KRL Sbjct: 164 GSVVGTASLRRKSQILKRYPHLQVDTNFRGNVQTRLKKLQEGIVTATLLALAGLKRLNMT 223 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + +L +++ P+ QGAI I + K + + +NHE+T +V+CERAFL LDG Sbjct: 224 EHVTGVLPMDEMLPAIAQGAIGIACRQGDEKMERYLASLNHEETRLAVSCERAFLEMLDG 283 Query: 243 SCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRF 298 SC++ IAG+A+ F G+V + DG E +R+G N + + +G+DAA+ + Sbjct: 284 SCRTPIAGYAHRDKLTDECKFRGLVASPDGTQVLETTRSGQYNLDEMVAMGKDAAKELLS 343 Query: 299 ISNKNVFNF 307 S ++ N+ Sbjct: 344 KSGPSLLNW 352 >gi|194336060|ref|YP_002017854.1| porphobilinogen deaminase [Pelodictyon phaeoclathratiforme BU-1] gi|238058995|sp|B4SFI2|HEM3_PELPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|194308537|gb|ACF43237.1| porphobilinogen deaminase [Pelodictyon phaeoclathratiforme BU-1] Length = 313 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 122/308 (39%), Positives = 171/308 (55%), Gaps = 6/308 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG Sbjct: 1 MKKQLIIGTRSSPLALWQAEFTKAELSR--HFPELDITLKLVKTTGDVLLDSPLSKIGDM 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT++IEK LI+ EID AVHS KD+PT GL I+++ RED RDV IS LKDL Sbjct: 59 GLFTKDIEKHLITKEIDLAVHSLKDVPTATPDGLIITSFTEREDTRDVIISKNGVKLKDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++ + TSSLRR + LL R D+ + D RG + TR K +N + A++LAYAG+ RL Sbjct: 119 PQNAKMATSSLRRMSQLLSLRPDLDIRDIRGNLNTRFQKFDNGEFDAMMLAYAGVFRLNF 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I EIL E P+ GQGA+ IET V++ + +E+V+++NH T ERA L L Sbjct: 179 SDRISEILPHEVMLPAVGQGALGIETRVDDEQTREIVRILNHSTTEYCCRAERALLRHLQ 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE--VSRNG--NRCDAINIGRDAAQYIR 297 G C+ I +A K TL V + DGKI +++ G + A G + A+ + Sbjct: 239 GGCQIPIGAYASFKNGTLTLLAYVGSVDGKIGLHNNITKTGLTSPEQAEAAGIELAEELL 298 Query: 298 FISNKNVF 305 + Sbjct: 299 KQGADAIL 306 >gi|94987453|ref|YP_595386.1| porphobilinogen deaminase [Lawsonia intracellularis PHE/MN1-00] gi|123262097|sp|Q1MPL2|HEM3_LAWIP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|94731702|emb|CAJ55065.1| Porphobilinogen deaminase [Lawsonia intracellularis PHE/MN1-00] Length = 309 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 115/304 (37%), Positives = 165/304 (54%), Gaps = 3/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR S LA A + L ++ + ++ + TKGD I + L ++GGKG Sbjct: 1 MKKITIATRGSKLAFWQANYIKDQLQKMYSY--LEVDLMVIKTKGDHILDVPLAKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L+SGE DCAVHS KD+P +L L ++A RED D+F+S +K L Sbjct: 59 LFVKEIEEALLSGEADCAVHSMKDVPMELPFELCLAAITEREDPTDMFLSIKYSGVKSLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++++GTSSLRR+A LL R D+ +I RG I+TRL KL + AI++A AGIKRL Sbjct: 119 ENALVGTSSLRRQAQLLALRPDLQIIPLRGNIDTRLRKLMAEEFDAIIMATAGIKRLGLI 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 L P+ GQGA+ IE EL +NH++T+ + ER FLA LDG Sbjct: 179 APYMSSLPCSVMLPAVGQGALGIEVQKERQDVLELFSFLNHKETYHCIQAERDFLAGLDG 238 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ IAG+A K T+ G+V SDG + + DA +IG ++ + Sbjct: 239 GCQVPIAGYATICKQETICLEGLVAKSDGSVMIRNRLERSVSDAYDIGMTLSKILLAEGA 298 Query: 302 KNVF 305 ++ Sbjct: 299 DDIL 302 >gi|226509736|ref|NP_001150986.1| LOC100284619 [Zea mays] gi|195643410|gb|ACG41173.1| porphobilinogen deaminase [Zea mays] Length = 356 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 130/306 (42%), Positives = 181/306 (59%), Gaps = 5/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGL Sbjct: 48 IRIGTRGSPLALAQAHETREKLKATHSELAEERAIEIVIIKTTGDMILDKPLADIGGKGL 107 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L Sbjct: 108 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPA 167 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SVIG++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RL + Sbjct: 168 GSVIGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLNMAE 227 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+ Sbjct: 228 NATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSALNHEDTRLAVACEREFLAVLDGN 287 Query: 244 CKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFIS 300 C++ IA +AY F G++ + G E +R+G D + +G+DA ++ + Sbjct: 288 CRTPIAAYAYRDNDGNCSFRGLLASPGGSKVFETTRSGPYSFDDMVEMGKDAGHELKAKA 347 Query: 301 NKNVFN 306 F+ Sbjct: 348 GPGFFD 353 >gi|163856376|ref|YP_001630674.1| porphobilinogen deaminase [Bordetella petrii DSM 12804] gi|229836105|sp|A9IKF3|HEM3_BORPD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|163260104|emb|CAP42405.1| hemC [Bordetella petrii] Length = 313 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 165/306 (53%), Gaps = 3/306 (0%) Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + I TR S LAL A R L ++ P + ++ L+T+GD+I +RTL+++G Sbjct: 1 MSVPQRLVIATRASRLALWQAEHVRDRLRALY--PACAVELLTLTTRGDQILDRTLSKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E L+ G D AVHS KD+P L ++ A L R D RD F+S+ +L Sbjct: 59 GKGLFVKELETALLDGRADLAVHSLKDVPVDLQAPFELCAILERADPRDAFVSNQYTTLA 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL +V+GTSSLRR++ + + +SV RG ++TRL+KL+ AI+LA AG++RL Sbjct: 119 DLPAGAVVGTSSLRRESQIRQRYPHLSVKPLRGNLDTRLSKLDRGDYAAIVLAAAGLQRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I+ +L ED P+ GQGA+ IE + +E + + T V ERA Sbjct: 179 GMGERIRSLLEPEDSLPAAGQGALGIEIRNDRNDLREWLAPLACSRTTACVVAERAVSRA 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L GSC+ +A +A G++L +V + DG G A IG+ AAQ + Sbjct: 239 LGGSCQVPLAAYAELNGNSLALRALVASPDGTRVIRSQHAGPAEQAQAIGQAAAQELLSN 298 Query: 300 SNKNVF 305 + Sbjct: 299 GADAIL 304 >gi|145588841|ref|YP_001155438.1| porphobilinogen deaminase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047247|gb|ABP33874.1| porphobilinogen deaminase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 325 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 102/303 (33%), Positives = 163/303 (53%), Gaps = 5/303 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A R L ++ P ++ I+ ++T+GD+I +R L+++GGKGLF Sbjct: 20 LVIASRESRLAMWQAEHVRDCLKSLY--PQCDVQILGMTTRGDQILDRALSKVGGKGLFV 77 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G AVHS KD+P + +G ++ + RED RD F+S+ SL++L + Sbjct: 78 KELETALEDGRAHLAVHSLKDVPMVMPEGFDLACVMAREDARDAFVSNDYASLEELPKGA 137 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+A+L + V RG ++TR+ KL+ + AI+LA AG+KRL E I Sbjct: 138 VVGTSSLRREAVLRAKFPHLEVHPLRGNLDTRMGKLDRGEYQAIILAAAGLKRLGLESRI 197 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L + + P+ GQGA+ IET +P + + +N T +V+ ER +L GSC+ Sbjct: 198 RAYLPYDPYTPAAGQGALGIETLSKHPSIKHWLAPLNDLPTLLAVSAERMVSRQLGGSCE 257 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNK 302 +A A + + V + DGK G +A +G AQ + Sbjct: 258 VPLAAHAVWDNNQMNIRSFVASVDGKAICLADGVGQVHTIEEAEALGLAVAQDLLAQGAA 317 Query: 303 NVF 305 ++ Sbjct: 318 DLI 320 >gi|126653692|ref|ZP_01725611.1| porphobilinogen deaminase [Bacillus sp. B14905] gi|126589729|gb|EAZ83864.1| porphobilinogen deaminase [Bacillus sp. B14905] Length = 310 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 116/300 (38%), Positives = 164/300 (54%), Gaps = 5/300 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + L P + + TKGD+I + L+++GGKG Sbjct: 1 MRKIIVGSRRSKLALTQTNWFINELKAAGA--PFEFEVKEIVTKGDQILDVQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L EID AVHS KDMP L +GL I PRED RD FIS DL Sbjct: 59 LFVKEIEQALYDKEIDFAVHSMKDMPAVLPEGLVIGCIPPREDARDAFISKGHVKFADLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 +V+GTSSLRR A LL R D+ + RG ++TRL KL + AI+LA AG+KRL Sbjct: 119 AGAVVGTSSLRRSAQLLTVRPDLEIKWIRGNVDTRLAKLETEEYDAIILAAAGLKRLGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E V+ E L++ED P+ QG++ IE ++ + + + + TW + ERAFLA +D Sbjct: 179 EDVVTEFLSVEDCLPAVAQGSLGIECRGDDTELLAELAKLTDQLTWQEAHAERAFLAAMD 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ IAG+A G + G+V A D + ++ + G+ DA IG + A + Sbjct: 239 GGCQVPIAGYATSNGDEITLTGLVAAPDASVVYKETVVGS--DAQKIGEELATILTKQGA 296 >gi|254283408|ref|ZP_04958376.1| porphobilinogen deaminase [gamma proteobacterium NOR51-B] gi|219679611|gb|EED35960.1| porphobilinogen deaminase [gamma proteobacterium NOR51-B] Length = 303 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 109/306 (35%), Positives = 159/306 (51%), Gaps = 9/306 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I TR SPLAL A L ++H P + ++ ++++GD++ +R L ++GG Sbjct: 1 MSK--IVIATRESPLALWQANHVADRLSELH--PELEVELLGMTSRGDQLLDRPLYKVGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L G D AVHS KD+P L GL + RED D + Sbjct: 57 KGLFVKELETALQDGSADIAVHSMKDVPMALPPGLTLGVICEREDPTDSLV--GVSGFDQ 114 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR + LLR R D+ + RG + TRL KL+ + +AI+LA AG+KRL Sbjct: 115 LPQGARVGTSSLRRGSQLLRHRPDLEIGFLRGNVNTRLAKLDAGEFNAIILASAGLKRLG 174 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++ + P+ GQGA+ IE + + EL+K ++H T V ERA + L Sbjct: 175 FEDRIGQLIDPDLSLPAGGQGAVGIEYRDGDDRIAELLKPLHHVQTAACVLAERALVRRL 234 Query: 241 DGSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DG C IA FA G L+ G V +++GK G D +G D A + Sbjct: 235 DGGCDVPIASFALPDGDGGLWLRGRVGSTEGKTLLLAEGRG--RDPEVLGYDVADQLLQA 292 Query: 300 SNKNVF 305 + Sbjct: 293 GAAELL 298 >gi|157693217|ref|YP_001487679.1| porphobilinogen deaminase [Bacillus pumilus SAFR-032] gi|167008811|sp|A8FFV2|HEM3_BACP2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157681975|gb|ABV63119.1| hydroxymethylbilane synthase [Bacillus pumilus SAFR-032] Length = 311 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 113/306 (36%), Positives = 176/306 (57%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + ++G+R S LA+ L +++ P ++ I + TKGD+I + TL+++GGKG Sbjct: 1 MRTIKVGSRRSKLAITQTKWVIQKLSELN--PSYSFEIKEIVTKGDQILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ +++ +ID AVHS KDMP L +GL I RED+RD IS L +L Sbjct: 59 LFVKEIEQAMLNHDIDMAVHSMKDMPAALPEGLVIGCIPEREDVRDALISKDHLHLHELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL+ R D+++ RG I+TRL KL N + AI+LA AG+ R+ Sbjct: 119 KGAIVGTSSLRRSAQLLQERPDLNIKWIRGNIDTRLEKLKNEEYDAIILAAAGLSRMGWS 178 Query: 183 KVIK-EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 K + E L+ E P+ GQGA+ IE ++ + +L+ +E T +V ERAFL ++D Sbjct: 179 KEVVSEFLSPETCLPAVGQGALSIECRGDDEELLQLLAQFTNEYTKKTVLAERAFLKQMD 238 Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ IAG+A + G+V ++DG + +G D IG A+ + Sbjct: 239 GSCQVPIAGYATMNERDEIELTGLVASADGHTIIRETVSGT--DPEAIGTACAKQMADKG 296 Query: 301 NKNVFN 306 K++ + Sbjct: 297 AKDLID 302 >gi|258511805|ref|YP_003185239.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478531|gb|ACV58850.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 305 Score = 243 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 113/303 (37%), Positives = 160/303 (52%), Gaps = 4/303 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+ TR S LAL L V ++P+ T+GD I +R L+E+GGKG Sbjct: 1 MRTLRVATRRSALALTQTNHVVDLLKQVAH--GVEFELVPIRTRGDEIVDRALSEVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +IE L +G+ D AVHS KD+P +L GL I A PRED RD IS T Q L DL Sbjct: 59 LFVADIEDALATGQADLAVHSLKDVPFELRDGLTIGAVPPREDPRDALISRTGQGLFDLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR+A L R R D+ V RG ++TRL +L + AI+LA +G+ RL Sbjct: 119 PGARVGTSSLRRQAALRRLRPDLCVETLRGNVDTRLRRLEEGQFDAIVLAASGLHRLGLA 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I E L ++ F P+ GQGA+ IE + + + I D +V ERAFL+ L+G Sbjct: 179 ERITEYLPVDRFVPAVGQGALAIECRAEDDEVMRHLAAIADPDATRAVEAERAFLSRLEG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC+ I +A G L V G ++ R G+ +A +G A+ + + Sbjct: 239 SCQVPIGAYAEPVGHELRLIAFVADPSGIHHLQLERTGD--EARALGVAMAEEMLRQGAE 296 Query: 303 NVF 305 + Sbjct: 297 DWL 299 >gi|325981153|ref|YP_004293555.1| porphobilinogen deaminase [Nitrosomonas sp. AL212] gi|325530672|gb|ADZ25393.1| porphobilinogen deaminase [Nitrosomonas sp. AL212] Length = 318 Score = 243 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 108/302 (35%), Positives = 165/302 (54%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LA+ A + L +++ P I I+ ++T+GD+I +++L++IGGKGL Sbjct: 9 KKIVIASRESLLAMWQAKFIQKCLSELY--PQTEISILGMTTRGDQILDQSLSKIGGKGL 66 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ L G D AVHS KDMP + +G +++A RED RD F+S+ SL L Sbjct: 67 FIKELEQALEDGRADIAVHSMKDMPMNVPEGFKLAAITEREDPRDAFVSNHHASLDVLPA 126 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S++GTSSLRR++ L + V RG ++TRL KL+ ++ AI+LA AG+KRL+ Sbjct: 127 GSIVGTSSLRRESQLRAHFPLLQVQPLRGNVQTRLRKLDEDQYAAIILAAAGLKRLELSN 186 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I +LN E P+ GQGA+ IE + +L++ ++H+ T V ER+ L GS Sbjct: 187 RITALLNPEQSLPAVGQGALGIECRADRMDLIQLMQPLHHQATAYCVEAERSMSRVLGGS 246 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ + FA L G V DGK + G I +G+ AQ + Sbjct: 247 CQVPLGAFAEIDNDKLRLRGFVAQPDGKRIVSGALEGKPETGIAMGQQLAQKLIKKGADE 306 Query: 304 VF 305 + Sbjct: 307 IL 308 >gi|193212401|ref|YP_001998354.1| porphobilinogen deaminase [Chlorobaculum parvum NCIB 8327] gi|209572771|sp|P28464|HEM3_CHLP8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|193085878|gb|ACF11154.1| porphobilinogen deaminase [Chlorobaculum parvum NCIB 8327] Length = 312 Score = 243 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 117/307 (38%), Positives = 171/307 (55%), Gaps = 5/307 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK IGTR SPLAL A T++ L + P NI + + T GD + + L++IG Sbjct: 1 MKKEIIIGTRSSPLALWQAEFTKAELSK--RFPDMNITLKLVKTTGDVLLDSPLSKIGDM 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT++IEK L++GEID AVHS KD+PT +GL I+++ RED RDV IS + + L DL Sbjct: 59 GLFTKDIEKHLLAGEIDLAVHSLKDVPTGTPEGLVITSFTEREDTRDVIISKSGKGLMDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++ + TSSLRR + LL R D+ ++D RG + TR K + A++LAYAG+ RL+ Sbjct: 119 PQNAKMATSSLRRMSQLLSLRPDLEIMDIRGNLNTRFKKFDEGDFDAMMLAYAGVYRLEF 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I EIL E P+ GQGA+ IET ++ + +E+V+V+N ++T ERA L L Sbjct: 179 SDRITEILPHETMLPAVGQGALGIETRTDDAETREIVRVLNDDNTEMCCRAERALLRHLQ 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIRF 298 G C+ I F TL V + DGK +A +G + A+ + Sbjct: 239 GGCQIPIGSFGSYIDGTLKLLAFVGSVDGKTGLRNEVTKAVKTPEEAEAVGIELAEILLS 298 Query: 299 ISNKNVF 305 + + + Sbjct: 299 MGAEKIL 305 >gi|114770079|ref|ZP_01447617.1| porphobilinogen deaminase [alpha proteobacterium HTCC2255] gi|114548916|gb|EAU51799.1| porphobilinogen deaminase [alpha proteobacterium HTCC2255] Length = 307 Score = 243 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 120/303 (39%), Positives = 171/303 (56%), Gaps = 1/303 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 P IGTR SPLALA A ET L+ + I + T GD+I +R L+E+GGKG Sbjct: 6 NSPLVIGTRGSPLALAQAHETMGRLIRSTGLDESCFKITVIKTSGDKIQDRPLSEVGGKG 65 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+EIE ++ ID AVHS KDMP +GL++S YLPRED+RD FIS +++ +L Sbjct: 66 LFTKEIEDAMLDYGIDIAVHSMKDMPVICPEGLKLSCYLPREDVRDSFISTKYKNINELP 125 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR+A LL R D+ +++FRG ++TRL KLN A A LA AG+ RL + Sbjct: 126 KGATVGTSSLRRRAQLLNKRPDLKIVEFRGNVQTRLRKLNEGVAEATFLACAGLNRLGR- 184 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + +D P+ QG I IE + + E++ IN + + ER LAELDG Sbjct: 185 NEISNPIEPDDMLPAIAQGCIGIEQREGDTEIAEILTKINDKSASLRLAAERTLLAELDG 244 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC++ IAG A G + G V+ DG + + + + + A+ +R + Sbjct: 245 SCQTPIAGLAELDGQKMRLRGEVIRPDGSEVLKDEIICHVNEGVEMASGMAKRLRDQMGE 304 Query: 303 NVF 305 + F Sbjct: 305 DFF 307 >gi|302817137|ref|XP_002990245.1| hypothetical protein SELMODRAFT_447969 [Selaginella moellendorffii] gi|300141954|gb|EFJ08660.1| hypothetical protein SELMODRAFT_447969 [Selaginella moellendorffii] Length = 353 Score = 243 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 130/309 (42%), Positives = 187/309 (60%), Gaps = 7/309 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A++TR L H + I+ + T GD+I N+ L +IGGKGL Sbjct: 44 IRIGTRGSPLALAQAYQTRDLLKGAHPELAEDGALEIVIIKTTGDKILNQPLADIGGKGL 103 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ ID AVHS KD+PT L +G + L RED RD FIS A+SL +L Sbjct: 104 FTKEIDDALLDNRIDIAVHSMKDVPTYLPQGTILPCNLRREDARDAFISLKAKSLAELPP 163 Query: 124 HSVIGTSSLRRKALLLRWRSDISVI-DFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SV+GT+SLRRK+ +L+ + V +FRG ++TRL KL A LLA AG+KRL Sbjct: 164 GSVVGTASLRRKSQILKRYPHLQVDTNFRGNVQTRLKKLQEGIVTATLLALAGLKRLNMT 223 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + +L +++ P+ QGAI I + K + + +NHE+T +V+CERAFL LDG Sbjct: 224 EHVTGVLPMDEMLPAIAQGAIGIACRQGDEKMERYLASLNHEETRLAVSCERAFLEMLDG 283 Query: 243 SCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRF 298 SC++ IAG+A+ F G+V + DG E +R+G N + + +G+DAA+ + Sbjct: 284 SCRTPIAGYAHRDKLTDECKFRGLVASPDGTQVLETTRSGQYNFDEMVAMGKDAAKELLS 343 Query: 299 ISNKNVFNF 307 S ++ N+ Sbjct: 344 KSGPSLLNW 352 >gi|149928342|ref|ZP_01916583.1| porphobilinogen deaminase [Limnobacter sp. MED105] gi|149822927|gb|EDM82172.1| porphobilinogen deaminase [Limnobacter sp. MED105] Length = 310 Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats. Identities = 105/303 (34%), Positives = 161/303 (53%), Gaps = 3/303 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI +R S LA+ A R L+ + + + I+ ++TKGD+I +R+L +IGGKGLF Sbjct: 2 KIRIASRESRLAMWQAEHVRDLLLALPGVSG--VEIVGMTTKGDQILDRSLAKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L+ G D AVHS KD+P + Q+ ++ RED D F+S+ SL DL Sbjct: 60 IKELEYALLEGRADLAVHSGKDIPMDVDPEFQLLGFMTREDPHDAFVSNDYASLADLPAG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+G+SSLRR+A +L + V RG ++TRL KL++ + AI+LA AG+KRL Sbjct: 120 AVVGSSSLRRQAQVLARYPHLKVEPLRGNLDTRLGKLDSGQYQAIVLAAAGLKRLGLHSR 179 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ ++ D P+ GQGA+ +E + + ELVK + V+ ER+ L GSC Sbjct: 180 IRNVIESTDMLPAVGQGALGLEIRAGDSQLAELVKPLIDPVCTALVSAERSVSKALGGSC 239 Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 + IAG+A T G+V + DGK E S + D + + + Sbjct: 240 QVPIAGYATLNDAQTFTLRGLVASPDGKAVIEKSAQASLQDWETAANRVIEGLLQEGAQA 299 Query: 304 VFN 306 + Sbjct: 300 LIE 302 >gi|330804637|ref|XP_003290299.1| porphobilinogen deaminase [Dictyostelium purpureum] gi|325079586|gb|EGC33179.1| porphobilinogen deaminase [Dictyostelium purpureum] Length = 319 Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats. Identities = 99/314 (31%), Positives = 166/314 (52%), Gaps = 11/314 (3%) Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M ++ IG+R S LA+ R L +++ P + I + T GD++ + +L++IG Sbjct: 1 MSERNTVYIGSRKSQLAMLQTEWVRDRLQELN--PNIKVEIKTMDTTGDKVLDVSLSKIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 KGLFT+E+E +++G +D AVHS KD+PT+L GL++ A R D FI++ + K Sbjct: 59 DKGLFTKELEDMMLNGSVDLAVHSLKDIPTRLPDGLKLGAITKRYSTSDAFIANVKKHGK 118 Query: 120 DL-----ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLA 172 D ++IG+SSLRR A L + + D RG + TR NKL+ +++ ++LA Sbjct: 119 DCKLSDLPNGALIGSSSLRRVAQLKKSYPHLQFKDIRGNLNTRFNKLDAVDSEYDGMILA 178 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 AG++R+ I +++ E + GQGA+ IE N+P +++++ +NH ++ Sbjct: 179 VAGLERMNLTDRISQVIPDEISLYAVGQGALGIECKENDPFIEKILEPLNHSESMMRCKA 238 Query: 233 ERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 ER+ L EL+G C I + + L GIVL DG + E G +G+D Sbjct: 239 ERSMLRELEGGCHVPIGVVTKINQNNILEIKGIVLNLDGSKYIESYIEGPVEQYEQLGKD 298 Query: 292 AAQYIRFISNKNVF 305 A + +K + Sbjct: 299 IAADLIKKGSKEIL 312 >gi|323136449|ref|ZP_08071531.1| porphobilinogen deaminase [Methylocystis sp. ATCC 49242] gi|322398523|gb|EFY01043.1| porphobilinogen deaminase [Methylocystis sp. ATCC 49242] Length = 308 Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats. Identities = 133/296 (44%), Positives = 178/296 (60%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RIGTR SPLALA R++L H + + I + T GD+I +R L+E GG Sbjct: 1 MTVRSLRIGTRGSPLALAQTHMIRAALAQAHGVAEDHFAIEIIKTTGDQIQDRPLSESGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E++ LI+G+ID AVHS+KD+PT L + I+ YLPRED RD +I +L Sbjct: 61 KGLFTKELDSALIAGDIDLAVHSSKDLPTHLPAEIVIAGYLPREDARDAWIGRNGVTLDQ 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT+SLRR A + R R D+ RG + TRLNK+ + A LLA AG+KRL Sbjct: 121 LPAGAVVGTASLRRAAQVKRLRPDVQTTLLRGNVHTRLNKVERGEIDATLLALAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +L ++DFPP+ GQGAI I + N+P+ + + + E T ++ ERAFLA L Sbjct: 181 LADRATALLPLDDFPPAVGQGAIGITSRANDPETRAALAPLLDEATALALLAERAFLAAL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 DGSC++ IAG A K L FYG VL +DG V R+G DA IG DA I Sbjct: 241 DGSCRTPIAGHATVKDGDLTFYGEVLKADGSEVWIVRRHGRAIDAAMIGADAGNEI 296 >gi|149181766|ref|ZP_01860257.1| porphobilinogen deaminase [Bacillus sp. SG-1] gi|148850507|gb|EDL64666.1| porphobilinogen deaminase [Bacillus sp. SG-1] Length = 310 Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 166/306 (54%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL S L ++ + + TKGD+I + TL+++GGKG Sbjct: 1 MRKIIVGSRRSKLALTQTNWVISQLKEL--DSSFEFEVKEIVTKGDQILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ ++ EID AVHS KDMP +L +GL I RED RD FIS L DL Sbjct: 59 LFVKEIEQAMLDKEIDMAVHSMKDMPAELPEGLCIGCIPEREDHRDAFISKDHVKLADLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 ++IGTSSLRR A +L R D+ + RG I+TRL KL AI+LA AG+ R+ Sbjct: 119 AGAIIGTSSLRRGAQILAQRPDLEIKWIRGNIDTRLGKLETEDYDAIILAAAGLSRMGWT 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 V+ E L+ E P+ GQGA+ IE ++ + L+ + +V ER FL +++ Sbjct: 179 SNVVTEFLDPEVCVPAVGQGALSIECREDDEELLGLLGKFASDQVTKTVTAERTFLHKME 238 Query: 242 GSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DGK ++ + G+ D + +G +AA + Sbjct: 239 GGCQVPIAGYAELLQEEDVKLTVLVASPDGKDIYKETVTGS--DPVQVGEEAAALLTERG 296 Query: 301 NKNVFN 306 K + + Sbjct: 297 AKALID 302 >gi|298369901|ref|ZP_06981217.1| hydroxymethylbilane synthase [Neisseria sp. oral taxon 014 str. F0314] gi|298281361|gb|EFI22850.1| hydroxymethylbilane synthase [Neisseria sp. oral taxon 014 str. F0314] Length = 311 Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats. Identities = 102/306 (33%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL++IGG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKALY--PDCEVEILGMTTRGDQILDKTLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFIKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPKGTIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + +++K +NH+ T V ERA L Sbjct: 179 LDERIRLILSEADSLPAAGQGALGIEIASHRTDLLDVLKPLNHDITRACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEEDGLLTLRGLVGHPDGSVILQADAQAPAAYADALGRAVAKKLADDG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 AQELIE 304 >gi|270158066|ref|ZP_06186723.1| porphobilinogen deaminase [Legionella longbeachae D-4968] gi|289163669|ref|YP_003453807.1| Porphobilinogen deaminase HemC [Legionella longbeachae NSW150] gi|269990091|gb|EEZ96345.1| porphobilinogen deaminase [Legionella longbeachae D-4968] gi|288856842|emb|CBJ10653.1| Porphobilinogen deaminase HemC [Legionella longbeachae NSW150] Length = 310 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 165/306 (53%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR SPLAL A R L ++K P NI ++P++T GD+ L +GG Sbjct: 1 MNSRIIRIATRQSPLALWQANYVRQLL--LNKWPKLNIELLPMTTSGDKFLKDKLLAVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ D AVHS+KDMP + GL ++A R++ D +SH SL+ Sbjct: 59 KGLFVKELEEALLDKRADFAVHSSKDMPAEFPHGLCLAAICKRDNPFDALVSHHYTSLQT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++IGT+SLRR++ LL +RSD+ V RG I TRL KL + AI+LA +G++R+ Sbjct: 119 LPERAIIGTASLRRQSQLLAYRSDLCVKPLRGNINTRLEKLRAGEYQAIILAASGLERMG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 VI E L E P+ GQGA+ IE ++ + LV +N + V+ ER A+L Sbjct: 179 FTHVITEQLPTEIMLPACGQGALAIECRTDDQETLALVAELNDPISSLCVHTERQVNAQL 238 Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G+C +A F + + L +L DG ++ G+ A N+ +Q + Sbjct: 239 GGNCHIPLAVFCTPIEKNQLLLQAKILTIDGSQTIADTQMGSFAQATNMADRCSQSLIAQ 298 Query: 300 SNKNVF 305 N+ Sbjct: 299 GAANLL 304 >gi|268317443|ref|YP_003291162.1| porphobilinogen deaminase [Rhodothermus marinus DSM 4252] gi|262334977|gb|ACY48774.1| porphobilinogen deaminase [Rhodothermus marinus DSM 4252] Length = 312 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 106/309 (34%), Positives = 167/309 (54%), Gaps = 7/309 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +GTR S LAL A RS L ++ + + T GD I + L +IG Sbjct: 1 MPEPTLILGTRGSALALRQATLIRSFLEAR----GVSVQVEIIRTTGDHIQDVPLAKIGA 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ--SL 118 KGLFT+E+++ L+ G ID AVHS KD+PT++ +GL ++A R DVF++H L Sbjct: 57 KGLFTKELDQALLEGRIDLAVHSLKDLPTEMPEGLVVAAVPERAPPWDVFVAHPDFAGRL 116 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +DL +V+ TSSLRR+A L WRSD+ V+ RG ++TRL KL H ++LA AG++R Sbjct: 117 EDLPTGAVVATSSLRRQAQLRAWRSDLQVVPVRGNVDTRLRKLEAEGWHGLILAEAGLQR 176 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + +++ + E P+ GQGA+ + N + + L++ ++H T +V ERA L Sbjct: 177 LGLLERVRQRIAPEILLPAVGQGALGVVCAEANRRVRALLQALHHAPTAAAVRAERALLH 236 Query: 239 ELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L G C+ +A A + TL G V++ DG+ E + G + +G A+ + Sbjct: 237 ALQGGCQVPVAALAAVEADGTLVLRGRVVSLDGRQLVEGVQRGAMAEPEAVGEALAETLL 296 Query: 298 FISNKNVFN 306 + + Sbjct: 297 QQGARAILE 305 >gi|251798413|ref|YP_003013144.1| porphobilinogen deaminase [Paenibacillus sp. JDR-2] gi|247546039|gb|ACT03058.1| porphobilinogen deaminase [Paenibacillus sp. JDR-2] Length = 323 Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 110/312 (35%), Positives = 162/312 (51%), Gaps = 12/312 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGK 61 + +GTR S LAL + L + + + I + TKGDRI + TL+++GGK Sbjct: 9 RTIVVGTRQSALALTQTGQVIDELKRISEKHGFDYHFEIRKIVTKGDRILDVTLSKVGGK 68 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +EIE+ L+ GEID AVHS KDMP +L +GL A R D RD I SL DL Sbjct: 69 GLFVKEIEQALLDGEIDMAVHSMKDMPYELPEGLMNGATPRRVDPRDCLIMKQGSSLDDL 128 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSSLRR + L R D+ + RG I++R+ KL A++LA AG+ R+ Sbjct: 129 PAGARVGTSSLRRSSQLKNIRPDLKLDSIRGNIDSRIRKLETEGFDAVVLAAAGLSRMGW 188 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I + ++ P+ GQGA+ IE + +EL+ ++N +T SV ER+FL L+ Sbjct: 189 QDRISAFIPVDLSIPAVGQGALGIECRTADAGVRELLNLLNDTETSLSVRAERSFLGALN 248 Query: 242 GSCKSAIAGFAYC--------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 G C+ I FA + L G+V + DG++ + R G D +GRD A Sbjct: 249 GGCQVPIGAFAVVHKKSEDSFDNAELELTGMVGSPDGEVMLKEIRKGT--DPEQLGRDVA 306 Query: 294 QYIRFISNKNVF 305 + + Sbjct: 307 AALSARGADRIL 318 >gi|260574199|ref|ZP_05842204.1| porphobilinogen deaminase [Rhodobacter sp. SW2] gi|259023665|gb|EEW26956.1| porphobilinogen deaminase [Rhodobacter sp. SW2] Length = 314 Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 130/303 (42%), Positives = 180/303 (59%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +IGTR SPLAL A ETR SLM +P I+ + GD++ +R L EIGGKGLF Sbjct: 11 PLKIGTRGSPLALWQAHETRRSLMAAFSLPEAAFEIVVIKVTGDQVQDRALKEIGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T EIE L+ G ID AVHS KDMPT +GL + YLPRED+RD F+S T L DL Sbjct: 71 TREIEDALLDGSIDIAVHSMKDMPTLQPEGLLLDCYLPREDVRDAFVSPTVARLADLPHG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +G+SSLRR+A L R D+++++FRG ++TR+ KL + A A LA AG+ RL V Sbjct: 131 ATVGSSSLRRRAQLAARRPDLNLVEFRGNVQTRMKKLEDGVAVATFLAMAGLNRLGMAHV 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + +E+ P+ QGAI IE +P+A+ L+ I+H T + CERA+L ELDGSC Sbjct: 191 ARSAIEVEEMLPAVAQGAIGIERRTADPRAEALLAGIHHGPTGIRLACERAYLQELDGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + IAG + +G ++ G +L DG DA GRD A+ + + + Sbjct: 251 ATPIAGMSVLEGDRIWLRGEILRPDGSEVIAGEIRAAASDAAEAGRDLARQLLGRAPEGF 310 Query: 305 FNF 307 F++ Sbjct: 311 FSW 313 >gi|332978074|gb|EGK14812.1| hydroxymethylbilane synthase [Desmospora sp. 8437] Length = 367 Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 104/304 (34%), Positives = 159/304 (52%), Gaps = 3/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +GTR S LA+ + D + + + T+GD+I N TL+++GGKG Sbjct: 59 MRTIVVGTRRSQLAVTQTQWVMEQVRDRLPQ-GWQMEMEKMVTRGDQILNVTLSKVGGKG 117 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L+ G ID AVHS KDMP ++ +GL A RED RD +S + L DL Sbjct: 118 LFVKEIEQALLDGRIDFAVHSMKDMPGEMPEGLIFGAVTRREDPRDCLLSRKGEGLDDLP 177 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ +GTSSLRR+A LL +R D+ V RG + TR KL + + AI+LA AGI R+ Sbjct: 178 ENACVGTSSLRRQAQLLAYRPDLRVEPVRGNLNTRYQKLMDGQFDAIILAQAGIARMDWT 237 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + +++ E P+ GQGA+ ++ ++ + EL+ +N T +V ER FL +G Sbjct: 238 DKVTQVVPEEVMLPAVGQGALAVQCRRDDQELLELLAEVNDPVTERAVTAERTFLQAFEG 297 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C IAG A G + G+V G G D + +GR A+ + + Sbjct: 298 GCHLPIAGRATVDGERIRLRGLVAHPSGTPILREEAEG--ADPVELGRRLARELMEKGAR 355 Query: 303 NVFN 306 ++ Sbjct: 356 SLLE 359 >gi|296080867|emb|CBI18797.3| unnamed protein product [Vitis vinifera] Length = 328 Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 138/307 (44%), Positives = 187/307 (60%), Gaps = 6/307 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A+ETR LM H I I+ + T GD+I + L +IGGKGL Sbjct: 21 VRIGTRGSPLALAQAYETRDKLMAAHSELAEEGAIQIVVIKTTGDKILTQPLADIGGKGL 80 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ L++G+ID AVHS KD+PT L + LPRED+RD FIS TA SL +L Sbjct: 81 FTKEIDEALLNGDIDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLTAASLSELPA 140 Query: 124 HSVIGTSSLRRKAL-LLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S++GT+SLRRK+ L R++S + +FRG ++TRL KLN A LLA AG+KRL Sbjct: 141 GSIVGTASLRRKSQLLHRYKSLNVLENFRGNVQTRLRKLNEGVVQATLLALAGLKRLNMT 200 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + IL+I++ P+ QGAI I N+ K + +NHE T +V CERAFL LDG Sbjct: 201 ENVTSILSIDEMLPAVAQGAIGIACRSNDDKMANYLASLNHEVTRLAVACERAFLETLDG 260 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFI 299 SC++ IAG+A + F G+V + DG E SR G D I +G+DA + + Sbjct: 261 SCRTPIAGYASHDEDGNCIFKGLVASPDGTKVLETSRKGPYALEDMIKMGKDAGEELLSR 320 Query: 300 SNKNVFN 306 + F+ Sbjct: 321 AGPGFFD 327 >gi|169829410|ref|YP_001699568.1| porphobilinogen deaminase [Lysinibacillus sphaericus C3-41] gi|238058924|sp|B1HVD6|HEM3_LYSSC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|168993898|gb|ACA41438.1| Porphobilinogen deaminase [Lysinibacillus sphaericus C3-41] Length = 310 Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 115/300 (38%), Positives = 165/300 (55%), Gaps = 5/300 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + L P + + TKGD+I + L+++GGKG Sbjct: 1 MRKIIVGSRRSKLALTQTNWFINELKAAGA--PFEFEVKEIVTKGDQILDVQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L EID AVHS KDMP L +GL I PRED RD FIS +L Sbjct: 59 LFVKEIEQALYEKEIDFAVHSMKDMPAVLPEGLVIGCIPPREDARDAFISKGHVKFSELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 +V+GTSSLRR A LL R D+ + RG ++TRL KL + AI+LA AG+KRL Sbjct: 119 AGAVVGTSSLRRSAQLLTVRPDLEIKWIRGNVDTRLAKLETEEYDAIILAAAGLKRLGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E V+ E L++ED P+ QG++ IE ++ + + + + + TW + ERAFLA +D Sbjct: 179 EDVVTEFLSVEDCLPAVAQGSLGIECREDDTELLDELAKLTDQLTWQEAHAERAFLAAMD 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ IAG+A G + G+V A D + ++ + G+ DA IG + A + Sbjct: 239 GGCQVPIAGYATSNGEEITLTGLVAAPDASVVYKETVVGS--DAQKIGEELATILTKQGA 296 >gi|326317960|ref|YP_004235632.1| porphobilinogen deaminase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374796|gb|ADX47065.1| porphobilinogen deaminase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 318 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 106/303 (34%), Positives = 157/303 (51%), Gaps = 9/303 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P I TR S LAL A ++ L H + ++ ++TKGD+I +RTL+++GGKGLF Sbjct: 17 PIVIATRESRLALWQAEHVQALLRAR----GHAVELLGMTTKGDQILDRTLSKVGGKGLF 72 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G AVHS KD+P +L +G +++ + RED RD F+S L DL Sbjct: 73 VKELEVALEEGRAHVAVHSLKDVPMELPEGFELACVMEREDPRDAFVSPRHACLADLPQG 132 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL E Sbjct: 133 AVVGTSSLRRQVLLQALRPDLDIQPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGMEDR 192 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + ++ P+ GQGA+ +E + V + H+ TW V ERA L GSC Sbjct: 193 IRALFEPDEMLPAAGQGALGLEVRSERHDLLQAVAPLAHQATWLCVAAERAVSRALGGSC 252 Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDG-KIFHEVSRNGNRC---DAINIGRDAAQYIRFI 299 +A TL G +G + V + +A +G A +R Sbjct: 253 SVPLAAHGRWTDAGTLRLDGAWGDPEGIRPLVRVQVSAPVASLPEAEALGSAVAARLRAD 312 Query: 300 SNK 302 + Sbjct: 313 GAQ 315 >gi|255558669|ref|XP_002520359.1| porphobilinogen deaminase, putative [Ricinus communis] gi|223540457|gb|EEF42025.1| porphobilinogen deaminase, putative [Ricinus communis] Length = 372 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 140/307 (45%), Positives = 187/307 (60%), Gaps = 6/307 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR LM H I I+ + T GD+I + L +IGGKGL Sbjct: 65 IRIGTRGSPLALAQAHETRDKLMAKHSELAEEGAIQIVIIKTTGDKILTQPLADIGGKGL 124 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+GEID AVHS KD+PT L + + LPRED+RD FIS +A SL +L Sbjct: 125 FTKEIDEALINGEIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSASSLAELPS 184 Query: 124 HSVIGTSSLRRKALL-LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SVIGT+SLRRK+ + R+ S + +FRG ++TRL KLN A LLA AG+KRL Sbjct: 185 GSVIGTASLRRKSQILHRYPSLSVLENFRGNVQTRLRKLNEGVVQATLLALAGLKRLNMT 244 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + +L+I+D P+ QGAI I N+ K + +NHE+T +V CERAFL LDG Sbjct: 245 ENVTSVLSIDDMLPAVAQGAIGIACRSNDDKMANYLASLNHEETRLAVACERAFLETLDG 304 Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFI 299 SC++ IAG+A + F G+V + DG E SR G D I +G+DA + + Sbjct: 305 SCRTPIAGYASKDENGDCIFKGLVASPDGTRVLETSRKGPYALDDMIMMGKDAGKELLLQ 364 Query: 300 SNKNVFN 306 + F+ Sbjct: 365 AGPGFFD 371 >gi|304407492|ref|ZP_07389144.1| porphobilinogen deaminase [Paenibacillus curdlanolyticus YK9] gi|304343443|gb|EFM09285.1| porphobilinogen deaminase [Paenibacillus curdlanolyticus YK9] Length = 325 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 108/314 (34%), Positives = 161/314 (51%), Gaps = 13/314 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGG 60 + R+GTR S LAL + L ++ + + + TKGDRI + TL+++GG Sbjct: 9 MRVIRVGTRQSALALTQTGQVIEQLKELSERHGLPYTFETVKIVTKGDRILDVTLSKVGG 68 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L+ GEID AVHS KDMP +L +GL + R D RDV I+ Sbjct: 69 KGLFVKEIEQALLDGEIDLAVHSMKDMPYELPEGLMNGSVPKRVDPRDVLITADGGGFDA 128 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR + L R DI ++ RG I++RL KL + AI+LA AG+ R+ Sbjct: 129 LPNGAKVGTSSLRRASQLKNRRPDIEIVSIRGNIDSRLKKLETEQFDAIVLAAAGMTRMG 188 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I L ++ P+ GQGA+ IE + + L+ ++N + +V ER+FL L Sbjct: 189 WENRISSPLPVDICVPAVGQGALGIECREADSDVRYLLSLLNDPISELAVRAERSFLGAL 248 Query: 241 DGSCKSAIAGFAYC---------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 +G C+ I A +G+ + GIV + DG+I + G D +G Sbjct: 249 NGGCQIPIGAHATVAIPEGASNLEGALIELVGIVGSPDGEILLKE--IGKGTDPEALGLS 306 Query: 292 AAQYIRFISNKNVF 305 A +R + Sbjct: 307 VAAALRANGADQIL 320 >gi|261364223|ref|ZP_05977106.1| hydroxymethylbilane synthase [Neisseria mucosa ATCC 25996] gi|288567837|gb|EFC89397.1| hydroxymethylbilane synthase [Neisseria mucosa ATCC 25996] Length = 311 Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats. Identities = 102/306 (33%), Positives = 169/306 (55%), Gaps = 2/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K I +R S LA+ A + L ++ P + I+ ++T+GD+I ++TL++IGG Sbjct: 1 MNPKKLVIASRESLLAMWQAKHIQGRLKTLY--PDCEVEILGMTTRGDQILDKTLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L G D AVHS KD+P L +G ++A R + D F+S+ L++ Sbjct: 59 KGLFIKELEQALQDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +++GTSSLRR+A L + + RG ++TRL+KL+N + AI+LA AG++RL+ Sbjct: 119 MPKGAIVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLE 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I+ IL+ D P+ GQGA+ IE + +++K +NH+ T V ERA L Sbjct: 179 LDERIRLILSEADSLPAAGQGALGIEIAAHRTDLLDVLKPLNHDVTHACVTAERALARAL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ +A + + L G+V DG + + A +GR A+ + Sbjct: 239 GGSCQVPLAAYCTEEDGLLTLRGLVGHPDGSVILQAHAQAPAAYAEALGRAVAKKLADDG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 AQELIE 304 >gi|328952141|ref|YP_004369475.1| Porphobilinogen deaminase [Desulfobacca acetoxidans DSM 11109] gi|328452465|gb|AEB08294.1| Porphobilinogen deaminase [Desulfobacca acetoxidans DSM 11109] Length = 311 Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats. Identities = 112/304 (36%), Positives = 164/304 (53%), Gaps = 2/304 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K RIGTR S LALA A + + + P + + + T GD+I + L +IGGK Sbjct: 1 MKNHLRIGTRGSALALAQAAWVQQQIQ--GRYPQITVDLEIIKTTGDKIQDVALAKIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT+EIE ++SGE+D VHS KD+PT++ GL I RED RD FIS +SL ++ Sbjct: 59 GLFTKEIEMAILSGEVDLGVHSMKDVPTEIPLGLVIGITTVREDPRDAFISRKYRSLAEI 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 L IGT SLRR+A LL R D+ ++ RG ++TRL KL AI+LA AG+ RL + Sbjct: 119 PLGGRIGTGSLRRRAQLLHLRPDLEIVPLRGNVDTRLRKLTEADLDAIILAAAGLHRLGR 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I IL P+ GQGA+ +E ++ EL++ ++ +T +V ERAFLA L+ Sbjct: 179 AAEITAILPETQMLPAIGQGALGLEYRQDDAVTMELLEFLDDPETRVAVAAERAFLARLE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ IA K L+ G++ G + + A ++G+ A+ + Sbjct: 239 GGCQVPIAAMGTLKKGELFLDGLIGDLAGSRIYREQLSRPPAAAADLGQQLAETLLKRGG 298 Query: 302 KNVF 305 + Sbjct: 299 AQIL 302 >gi|255634492|gb|ACU17610.1| unknown [Glycine max] Length = 350 Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats. Identities = 137/306 (44%), Positives = 189/306 (61%), Gaps = 6/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 +IGTR SPLALA A+ETR LM H I I+ + T GD+I ++ L +IGGKGL Sbjct: 43 LKIGTRGSPLALAQAYETRDKLMASHPELAEEGAIQIVIIKTTGDKILSQPLADIGGKGL 102 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+G+ D AVHS KD+PT L + LPRED+RD FIS +A SL DL Sbjct: 103 FTKEIDEALINGDSDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLSAASLADLPS 162 Query: 124 HSVIGTSSLRRKALLLRWRSDISV-IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SV+GT+SLRRK+ +L ++V +FRG ++TRL KL+ A LLA AG+KRL Sbjct: 163 GSVVGTASLRRKSQILHRYPSLNVEENFRGNVQTRLRKLSEGIVQATLLALAGLKRLNMT 222 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + IL+I+D P+ QGAI I N+ K E + +NHE+T +V+CERAFL +L+G Sbjct: 223 ENVSSILSIDDMLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAVSCERAFLEKLEG 282 Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFI 299 SC + IAG+A + F G+V + DG E SR G+ D I +G+DA + + Sbjct: 283 SCHTPIAGYASRNEDGNCLFRGLVASPDGTRVLETSRIGSYAFEDMIKMGKDAGEELLSR 342 Query: 300 SNKNVF 305 + F Sbjct: 343 AGPGFF 348 >gi|21674248|ref|NP_662313.1| porphobilinogen deaminase [Chlorobium tepidum TLS] gi|25453021|sp|Q8KCJ4|HEM3_CHLTE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|21647416|gb|AAM72655.1| porphobilinogen deaminase [Chlorobium tepidum TLS] Length = 312 Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats. Identities = 116/307 (37%), Positives = 170/307 (55%), Gaps = 5/307 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK IGTR SPLAL A T++ L P NI + + T GD + + L++IG Sbjct: 1 MKKELIIGTRSSPLALWQAEFTKAELSR--HFPELNITLKLVKTTGDVLLDSPLSKIGDM 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT++IEK L++ EID AVHS KD+PT +GL IS++ RED RDV IS + + LKDL Sbjct: 59 GLFTKDIEKHLLAKEIDLAVHSLKDVPTGTPEGLVISSFTKREDTRDVIISKSGKGLKDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++ + TSSLRR + LL R D+ ++D RG + TR K ++ + A++LAYAG+ RL+ Sbjct: 119 PPNARMATSSLRRMSQLLSMRPDLQILDIRGNLNTRFKKFDDGEFDAMMLAYAGVYRLEF 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I EIL + P+ GQGA+ IET ++ + E+V+V+N +T ERA L L Sbjct: 179 SDRISEILPHDVMLPAVGQGALGIETRTDDAETIEIVRVMNDSNTEICCRAERALLRHLQ 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRF 298 G C+ I + TL V + DGK +A +G + A+ + Sbjct: 239 GGCQIPIGCYGSYISGTLKLLAFVGSVDGKTALRNELTKPVNTPEEAEAVGIELAEVLLS 298 Query: 299 ISNKNVF 305 + + + Sbjct: 299 MGAEKIL 305 >gi|152976881|ref|YP_001376398.1| porphobilinogen deaminase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189042874|sp|A7GTE5|HEM3_BACCN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|152025633|gb|ABS23403.1| porphobilinogen deaminase [Bacillus cytotoxicus NVH 391-98] Length = 309 Score = 241 bits (615), Expect = 8e-62, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 166/305 (54%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLQALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPAGLTIGCIPKRVDPRDAFISKNGKSFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG+KR+ + Sbjct: 119 KGATLGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLQEENYDAIILATAGLKRMGWD 178 Query: 183 K-VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+ Sbjct: 179 NDVITEHLDESLCVPAVGQGALAIECREDDKDLLQLLAHMNDAATERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + + +V ++DG + + + G + +G +AA+ + Sbjct: 239 GGCQVPIAGYATLQENGKIKLHALVGSTDGSVLLKETVVGT--NPETVGLEAAERLIHQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|299535618|ref|ZP_07048939.1| porphobilinogen deaminase [Lysinibacillus fusiformis ZC1] gi|298728818|gb|EFI69372.1| porphobilinogen deaminase [Lysinibacillus fusiformis ZC1] Length = 310 Score = 241 bits (615), Expect = 9e-62, Method: Composition-based stats. Identities = 115/300 (38%), Positives = 158/300 (52%), Gaps = 5/300 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + L P + + TKGD+I + L+++GGKG Sbjct: 1 MRKIIVGSRRSKLALTQTNWFINELKAAGV--PFEFEVKEIVTKGDQILDVQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L EID AVHS KDMP L GL I PRED RD FIS DL Sbjct: 59 LFVKEIEQALYDKEIDFAVHSMKDMPAVLPDGLVIGCIPPREDARDAFISKGHVKFADLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 +V+GTSSLRR A LL R DI + RG ++TRL KL + AI+LA AG+KRL Sbjct: 119 AGAVVGTSSLRRSAQLLTVRPDIEIKWIRGNVDTRLAKLETEEYDAIILAAAGLKRLGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + V+ E L +E P+ QG++ IE ++ + + + TW + ERAFLA +D Sbjct: 179 DDVVTEFLPVEQCLPAVAQGSLGIECRADDAELLAELGKLTDSFTWQEAHAERAFLAAMD 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ IAG+A G + G+V A D + + + G DA IG + A + Sbjct: 239 GGCQVPIAGYATSIGEEITLTGLVAAPDASVVFKETVVGT--DAQKIGEELAAILTEQGA 296 >gi|242309899|ref|ZP_04809054.1| porphobilinogen deaminase [Helicobacter pullorum MIT 98-5489] gi|239523196|gb|EEQ63062.1| porphobilinogen deaminase [Helicobacter pullorum MIT 98-5489] Length = 314 Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 101/306 (33%), Positives = 161/306 (52%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K IGTR S LAL A + +L + + + + + TKGD+I + L +IGGKG Sbjct: 1 MKKIIIGTRGSVLALWQANFVKRALEEQYS--NLEVELKIVKTKGDKILDVPLAKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E+ ++ GEID AVHS KD+P + ++ L ++A RED+RD F+S +SL++L Sbjct: 59 LFTKELEELMLKGEIDIAVHSLKDVPVEFVENLGLAAITKREDVRDSFLSFKYKSLEELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GT+SLRR + R D+ I RG ++TRL +L AI+LA AG+ RL E Sbjct: 119 SGAKVGTTSLRRVMQIHTLRKDLDCISLRGNVQTRLKRLKEGDFDAIILAQAGVNRLGIE 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I I+ ++ P+ GQ A+ IE + + K E++ +N + + ER F+ L+G Sbjct: 179 NEIPYIIPLDFMIPAMGQAALGIECRM-DSKVVEMLDFLNDKKACFETSAEREFVRTLEG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFI 299 C+ I A + + L ++ DG S+ + IGR A + Sbjct: 238 GCQVPIGVNANLENNLLSIKAVLGIPDGTKCLRDSKEVQVQGVEECRQIGRKLALEMIDK 297 Query: 300 SNKNVF 305 + + Sbjct: 298 GAREIL 303 >gi|218295973|ref|ZP_03496753.1| porphobilinogen deaminase [Thermus aquaticus Y51MC23] gi|218243711|gb|EED10239.1| porphobilinogen deaminase [Thermus aquaticus Y51MC23] Length = 303 Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 105/303 (34%), Positives = 157/303 (51%), Gaps = 8/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +GTR S LALA L + P + + T+GD + + Sbjct: 1 MRVIVVGTRGSALALAQTRWVVERLKE--SWPEAEFKVKTIRTRGDGGADPR-----EQA 53 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F +E+++ L++ EID AVHS KD+PT+ KGL+I+A R+D RD F+ + L+DL Sbjct: 54 IFVKELQEALLAREIDIAVHSLKDLPTEEPKGLKIAAIPRRQDPRDAFLGKAFKRLEDLP 113 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSS+RRKA +L R D+ V D RG ++TRL L + AI+LA AG+ RL Sbjct: 114 PGAVVGTSSIRRKAQILAHRPDLVVKDLRGNVDTRLAALGGGEYDAIILAAAGLIRLDLR 173 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + L E P+PGQGA+ +E + A+EL ++H + D V ERAFL L Sbjct: 174 NRIDQFLEPEVMLPAPGQGALALEVRQGDDLAEELSYALHHHASHDRVRAERAFLRGLGA 233 Query: 243 SCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C + + A + TL G + A DGK F G +A +G + A+ I Sbjct: 234 GCLAPVGALAQVGEDGTLVLEGGIFAPDGKSFIRAEIEGEASEAEELGLELARDILEQGG 293 Query: 302 KNV 304 + + Sbjct: 294 REI 296 >gi|85713686|ref|ZP_01044676.1| porphobilinogen deaminase [Nitrobacter sp. Nb-311A] gi|85699590|gb|EAQ37457.1| porphobilinogen deaminase [Nitrobacter sp. Nb-311A] Length = 316 Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 138/299 (46%), Positives = 191/299 (63%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 IGTR SPLALA A E R L H++ P I I + T GD I +R L ++GGKGLFT+ Sbjct: 12 TIGTRGSPLALAQAHEVRDRLARAHQVAPERIAIKTIRTSGDAIQDRPLFDVGGKGLFTK 71 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE+ L++G ID AVHS+KD+PT L + A+LPRED+RDVFIS A SL DL S+ Sbjct: 72 EIEEALLAGAIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDVFISPRAASLHDLPAGSI 131 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GT+SLRR+A++LR R D+ V RG +ETRL K++ +A A LLA AG+ RL + Sbjct: 132 VGTASLRRQAMVLRLRPDLKVNALRGNVETRLRKIDAGEADATLLALAGLNRLGLQDKAT 191 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 IL E+F P+ GQGAI IE+ ++ + VK I +T +++ ER+FLA LDGSC++ Sbjct: 192 RILETEEFLPAVGQGAIAIESRRDDDRINAFVKAIGDSETEVALSAERSFLALLDGSCRT 251 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 I G G ++F G++++ DG +E +R G R DA +G DAA +R + + F Sbjct: 252 PIGGHCRVNGDRIHFRGLIISPDGTESYETTREGARADAAALGADAAHELRERAGEKFF 310 >gi|194334346|ref|YP_002016206.1| porphobilinogen deaminase [Prosthecochloris aestuarii DSM 271] gi|238058997|sp|B4S922|HEM3_PROA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|194312164|gb|ACF46559.1| porphobilinogen deaminase [Prosthecochloris aestuarii DSM 271] Length = 312 Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 114/308 (37%), Positives = 168/308 (54%), Gaps = 6/308 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ IGTR SPLAL A T++ L P +I + + T GD + + L++IG Sbjct: 1 MKQQLIIGTRSSPLALWQAEFTKAELSK--NFPELDIQLKLIKTTGDVLLDSPLSKIGDM 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT++IEK L++ EID AVHS KD+PT+ +GL +SA+ RED RDV IS +LK L Sbjct: 59 GLFTKDIEKHLLAKEIDLAVHSLKDVPTETPEGLILSAFTEREDTRDVIISKNGDNLKQL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++ I TSSLRR + LL R D + D RG + TR + + + A++LAYAG+ RL Sbjct: 119 KPNAKIATSSLRRTSQLLGIRPDFEMGDIRGNLNTRFKRFDESDFDAMILAYAGVHRLNF 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I EIL + P+ GQGA+ IET +++ + +++VKV+N++++ ERA L L Sbjct: 179 GDRISEILPHDVLLPAVGQGALGIETRIDDEQTRQIVKVMNNQNSEYCTKAERALLRHLQ 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN----RCDAINIGRDAAQYIR 297 G C+ I +A K TL+ V + DGK A G + A+ + Sbjct: 239 GGCQIPIGAYATYKNGTLHLSAFVGSVDGKRAIRNEITKENVTAPELAEKTGIELAEELM 298 Query: 298 FISNKNVF 305 + Sbjct: 299 KQGANEIL 306 >gi|281203457|gb|EFA77657.1| porphobilinogen deaminase [Polysphondylium pallidum PN500] Length = 324 Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 107/316 (33%), Positives = 154/316 (48%), Gaps = 13/316 (4%) Query: 1 MEKKP----FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLT 56 M IG+R S LA+ SL ++H P I + T GDR+ N L+ Sbjct: 1 MSNNKNRDTIIIGSRKSQLAMVQTESVMKSLQELH--PNLKFEIKTMDTVGDRVLNVALS 58 Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116 +IG KGLFT+E+E ++SG ID AVHS KD+PTK +GL + A RE+ D FI+H Sbjct: 59 KIGDKGLFTKELEDLMLSGHIDIAVHSLKDLPTKFPEGLSLGAITKRENCFDAFIAHPKY 118 Query: 117 SLK----DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILL 171 + +VIG+SSLRR + L R + D RG + TR NKL + ++L Sbjct: 119 GKDARLSSMPEGAVIGSSSLRRVSQLKRAYPQLQFKDIRGNLNTRFNKLETSGEYDGMIL 178 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG++RL I E+L E + GQGA+ IE ++ Q L+ +NH +T Sbjct: 179 AVAGLERLGWTDRITEVLQPEVSLYAVGQGALGIECRSDDEFVQSLLAPLNHYETAQCCA 238 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 ERA L EL+G C I + + L G+VL+ DG +S G +G Sbjct: 239 AERAMLRELEGGCHVPIGVNTTLEQNNSILSIEGVVLSLDGTKSIRLSHRGEIDQPEIVG 298 Query: 290 RDAAQYIRFISNKNVF 305 + A ++ + Sbjct: 299 KQLALMLKEKGATEIL 314 >gi|160872858|ref|ZP_02062990.1| porphobilinogen deaminase [Rickettsiella grylli] gi|159121657|gb|EDP46995.1| porphobilinogen deaminase [Rickettsiella grylli] Length = 311 Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 124/308 (40%), Positives = 170/308 (55%), Gaps = 5/308 (1%) Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M KK RI TR SPLA A ++ L + P I ++P T+GDR + +L + G Sbjct: 1 MSKKKFLRIATRKSPLAYWQATSIKNQLEKI--FPFLKITLLPFVTEGDR-PSHSLNQWG 57 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E L+ G+ D AVHS KD+P L KGL + A R D RDV IS + + Sbjct: 58 GKGLFVKELEAALLHGQADIAVHSLKDLPMTLEKGLVLGAICKRCDPRDVLISRSDRLFT 117 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L S +GTSSLRR++ LL R D+ + RG I TRLNKL + AI+LA AG+ RL Sbjct: 118 QLPPGSYVGTSSLRRQSQLLALRPDLKIGVLRGNIGTRLNKLAAGEFDAIILAAAGLIRL 177 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 KK + I E I+ F P+PGQGA+ IE H N+ ++ + + H T V ERA E Sbjct: 178 KKTECISEYFEIDHFLPAPGQGALGIECHENDEESLTYISALIHPITHSCVLAERALSRE 237 Query: 240 LDGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L G C+ +A + A + V +SDG +V + G R +A IG AAQ +R Sbjct: 238 LGGGCQVPLAAYAASLGQDFIRLQAFVGSSDGTTQIKVEKQGPRVEAEKIGFLAAQDLRA 297 Query: 299 ISNKNVFN 306 + + + N Sbjct: 298 LGVEEILN 305 >gi|167636181|ref|ZP_02394485.1| porphobilinogen deaminase [Bacillus anthracis str. A0442] gi|170688695|ref|ZP_02879900.1| porphobilinogen deaminase [Bacillus anthracis str. A0465] gi|254687046|ref|ZP_05150904.1| porphobilinogen deaminase [Bacillus anthracis str. CNEVA-9066] gi|254741606|ref|ZP_05199293.1| porphobilinogen deaminase [Bacillus anthracis str. Kruger B] gi|167528402|gb|EDR91170.1| porphobilinogen deaminase [Bacillus anthracis str. A0442] gi|170667381|gb|EDT18139.1| porphobilinogen deaminase [Bacillus anthracis str. A0465] Length = 309 Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASYKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+ Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 239 GGCQVPIAGYATITENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|81299776|ref|YP_399984.1| porphobilinogen deaminase [Synechococcus elongatus PCC 7942] gi|161621822|ref|YP_171285.2| porphobilinogen deaminase [Synechococcus elongatus PCC 6301] gi|123755408|sp|Q31PM2|HEM3_SYNE7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|81168657|gb|ABB56997.1| hydroxymethylbilane synthase [Synechococcus elongatus PCC 7942] Length = 320 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 107/306 (34%), Positives = 157/306 (51%), Gaps = 5/306 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P RIG+R S LAL + L ++ P + +ST+GD I + L +IG KGL Sbjct: 7 RPIRIGSRKSQLALVQTHWVQGELQRLY--PDRQFDVQTMSTQGDIILDVALAKIGDKGL 64 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-- 121 FT+E+E +++GE+D AVHS KD+PT+L +GL + RED D + H L Sbjct: 65 FTKELEVAMLAGEVDFAVHSLKDLPTRLPEGLILGCVTEREDPADALVVHDRFKDHQLET 124 Query: 122 -ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 +VIGTSSLRR A L + D RG + TRL KL+ + A++LA AG++RL Sbjct: 125 LPEGTVIGTSSLRRLAQLRHHYPHLQFKDVRGNLNTRLAKLDAGEYDALILAAAGLQRLS 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ + GQGA+ IE +P+ EL+K + HE T ERAFL EL Sbjct: 185 MADRIHQLIPAAVSLHAVGQGALGIECRAEDPEILELLKALEHEPTSQRCLAERAFLREL 244 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I TL G+V + DG+ +G D +G A ++ Sbjct: 245 EGGCQVPIGVNTAIADGTLTLTGMVASLDGQRLLRDQVSGPTSDPEALGLALAAQLKAQG 304 Query: 301 NKNVFN 306 K + + Sbjct: 305 AKEILD 310 >gi|328871819|gb|EGG20189.1| porphobilinogen deaminase [Dictyostelium fasciculatum] Length = 318 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 112/315 (35%), Positives = 160/315 (50%), Gaps = 10/315 (3%) Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M KK IG+R S LAL L ++H +N + L T GDR+ N L++IG Sbjct: 1 MSDKKTVYIGSRKSQLALVQTHHVIDRLKELHG-SKYNFELKTLDTVGDRVLNVALSKIG 59 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 KGLFT+E+E +ISG+ID AVHS KD+PTK +GL + A RE+ D FI + ++ Sbjct: 60 DKGLFTKELEDLMISGDIDIAVHSLKDIPTKFPEGLGLGAITKRENCLDAFIVNASKHRP 119 Query: 120 -----DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAY 173 +L ++IG+SSLRR + L R + D RG + TR KL + ++LA Sbjct: 120 TCTLAELPEGAIIGSSSLRRVSQLKRAYPHLQFKDIRGNLNTRFEKLEKSGEYDGMILAV 179 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG++RL I EI+ + GQGA+ IE N+P L++ +N +DT E Sbjct: 180 AGLERLGWTDRITEIIQPTVSLYAVGQGALGIECRSNDPLIMSLLEPLNDKDTASCCIAE 239 Query: 234 RAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 RA L+EL+G C I + + GIVL DG +S G +GR+ Sbjct: 240 RAMLSELEGGCHVPIGVISSIDVERQLITLEGIVLNLDGSRAIRLSHTGPLASCHQVGRE 299 Query: 292 AAQYIRFISNKNVFN 306 AQ + K + N Sbjct: 300 LAQQLIEKGAKEILN 314 >gi|332968975|gb|EGK08019.1| hydroxymethylbilane synthase [Kingella kingae ATCC 23330] Length = 312 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 104/303 (34%), Positives = 163/303 (53%), Gaps = 3/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LA+ A ++ L ++ P I I+ ++T+GD+I ++TL++IGGKGL Sbjct: 5 KKLTIASRESALAMWQARHIQAQLQALY--PDCQIDILGMTTQGDQILDKTLSKIGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L D AVHS KD+P L +G + A R + D F+S+ L+DL Sbjct: 63 FIKELETALQENRADLAVHSIKDVPMDLPEGFALVAIGERANPFDAFVSNQYARLEDLPQ 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+A L +++ RG ++TRL KL+N AI+LA AG++RL+ + Sbjct: 123 GAIVGTSSLRREAQLRARFPHLNIKPLRGNVQTRLAKLDNGDYDAIILAAAGLERLELHE 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ +L+ D P+ GQGA+ IE + + + +NH T V ERA L GS Sbjct: 183 RIRSVLSPADSLPAAGQGALGIEIAAHRADLVQTLLPLNHAKTAACVTAERALARALGGS 242 Query: 244 CKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ +A + + L +G+V DG + V A +GR A+ + K Sbjct: 243 CQVPLAAYCTADDNGVLTLHGLVAHPDGSVMLTVQAQAPAEYADALGRAVAKKLADDGAK 302 Query: 303 NVF 305 +V Sbjct: 303 DVI 305 >gi|308803813|ref|XP_003079219.1| putative porphobilinogen deaminase (ISS) [Ostreococcus tauri] gi|116057674|emb|CAL53877.1| putative porphobilinogen deaminase (ISS) [Ostreococcus tauri] Length = 441 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 119/304 (39%), Positives = 171/304 (56%), Gaps = 4/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A+ TR L + + I + T GD++ ++ L +IGGKGL Sbjct: 47 VRIGTRGSPLALAQAYMTRDLLKENFPELAEDGALEICIIKTTGDKVLDQPLADIGGKGL 106 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT E++ L+ G ID AVHS KD+PT L +G+ + LPRED+RD F+ SL DL Sbjct: 107 FTRELDDALLDGRIDIAVHSMKDVPTYLPEGMVLPCMLPREDVRDAFLCLKYDSLDDLPE 166 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GT+SLRR++ LL + ++FRG +++R+ KL LLA AG+KR+ + Sbjct: 167 GAVVGTASLRRQSQLLYKYPTLKCVNFRGNVQSRIRKLKEEVVDCTLLAIAGLKRMDLAQ 226 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 K I+ E P+ QGAI I + K + +NHEDT +V ERAFLA LDGS Sbjct: 227 HAKLIIPTEQMLPAVAQGAIGITCRGGDDKQLAFLAKLNHEDTRMAVEGERAFLAALDGS 286 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI--GRDAAQYIRFISN 301 C++ IA + + F G++ + DGK E +R G A + G DA ++ + Sbjct: 287 CRTPIAAHCHNVDGKMQFRGLIASLDGKEVLETTREGAWDAASLLAAGTDAGAELKGKAP 346 Query: 302 KNVF 305 + F Sbjct: 347 ADFF 350 >gi|229175146|ref|ZP_04302662.1| Porphobilinogen deaminase [Bacillus cereus MM3] gi|228608282|gb|EEK65588.1| Porphobilinogen deaminase [Bacillus cereus MM3] Length = 309 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLQEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+ Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDTVTERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG I + + G + +G +AA + Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSILLKETVVGT--NPEEVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|254455286|ref|ZP_05068715.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. HTCC7211] gi|207082288|gb|EDZ59714.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. HTCC7211] Length = 305 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 107/300 (35%), Positives = 175/300 (58%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K IG+R S LAL +A + + ++ I +I+I ++TKGD++ + L+E+GGK Sbjct: 1 MNKKITIGSRGSKLALIYAQKAKDKIIQNTNIKDEDIIIKEITTKGDQVQDMRLSEVGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF+ IEK+L +ID AVH+ KDMP GL+ + +L R D R++ I+ + + L +L Sbjct: 61 GLFSTNIEKELQDKKIDIAVHALKDMPAIETVGLRTNTFLKRNDPREILIAQSGKKLNEL 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++S+IGTSS RR+ + + RSDI+ RG ++TR+ KLN+ AI+L+YAGIK L+ Sbjct: 121 KINSIIGTSSYRREFQIKKIRSDINCKLIRGNVDTRIKKLNDGLYDAIILSYAGIKSLEI 180 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I EI +IE+ PS GQG I ++ N+ + ++ IN ++T + ER L L+ Sbjct: 181 EDKITEIFSIEEIIPSAGQGIIALQCRNNDIEIISVLDEINDKETSSMAHAERNVLKVLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C++AI A + + + + DGK ++ DA +G++ + ++ SN Sbjct: 241 GDCETAIGTHAIIEEDKIILQAELFSLDGKQRFFEKKSSKINDARELGKELGEILKTKSN 300 >gi|120610679|ref|YP_970357.1| porphobilinogen deaminase [Acidovorax citrulli AAC00-1] gi|120589143|gb|ABM32583.1| porphobilinogen deaminase [Acidovorax citrulli AAC00-1] Length = 318 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 106/303 (34%), Positives = 157/303 (51%), Gaps = 9/303 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P I TR S LAL A ++ L H + ++ ++T+GDRI +RTL+++GGKGLF Sbjct: 17 PIVIATRESRLALWQAEHVQALLRAR----GHAVELLGMTTQGDRILDRTLSKVGGKGLF 72 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G AVHS KD+P +L +G +++ + RED RD F+S L DL Sbjct: 73 VKELEVALEEGRAHVAVHSLKDVPMELPEGFELACVMEREDPRDAFVSPRHACLADLPQG 132 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL E Sbjct: 133 AVVGTSSLRRQVLLQALRPDLVIQPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGLEGR 192 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + ++ P+ GQGA+ +E + V + H+ TW V ERA L GSC Sbjct: 193 IRALFEPDEMLPAAGQGALGLEVRSERHDLLQAVAPLAHQATWLCVAAERAVSRALGGSC 252 Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDG-KIFHEVSRNGNRC---DAINIGRDAAQYIRFI 299 +A TL G +G + V + +A +G A +R Sbjct: 253 SVPLAAHGRWTDAGTLRLDGAWGDPEGIRPLVRVQISAPVASLPEAEALGSAVAARLRAD 312 Query: 300 SNK 302 + Sbjct: 313 GAQ 315 >gi|30264532|ref|NP_846909.1| porphobilinogen deaminase [Bacillus anthracis str. Ames] gi|47529995|ref|YP_021344.1| porphobilinogen deaminase [Bacillus anthracis str. 'Ames Ancestor'] gi|49187356|ref|YP_030608.1| porphobilinogen deaminase [Bacillus anthracis str. Sterne] gi|65321833|ref|ZP_00394792.1| COG0181: Porphobilinogen deaminase [Bacillus anthracis str. A2012] gi|165871949|ref|ZP_02216590.1| porphobilinogen deaminase [Bacillus anthracis str. A0488] gi|167640713|ref|ZP_02398973.1| porphobilinogen deaminase [Bacillus anthracis str. A0193] gi|170708352|ref|ZP_02898796.1| porphobilinogen deaminase [Bacillus anthracis str. A0389] gi|177653999|ref|ZP_02936040.1| porphobilinogen deaminase [Bacillus anthracis str. A0174] gi|190566915|ref|ZP_03019831.1| porphobilinogen deaminase [Bacillus anthracis Tsiankovskii-I] gi|227817244|ref|YP_002817253.1| porphobilinogen deaminase [Bacillus anthracis str. CDC 684] gi|229601857|ref|YP_002868748.1| hydroxymethylbilane synthase [Bacillus anthracis str. A0248] gi|254736568|ref|ZP_05194274.1| porphobilinogen deaminase [Bacillus anthracis str. Western North America USA6153] gi|254754796|ref|ZP_05206831.1| porphobilinogen deaminase [Bacillus anthracis str. Vollum] gi|254757628|ref|ZP_05209655.1| porphobilinogen deaminase [Bacillus anthracis str. Australia 94] gi|39931467|sp|Q81LC7|HEM3_BACAN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800231|sp|C3P9E9|HEM3_BACAA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800232|sp|C3L6Z5|HEM3_BACAC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|30259190|gb|AAP28395.1| hydroxymethylbilane synthase [Bacillus anthracis str. Ames] gi|47505143|gb|AAT33819.1| porphobilinogen deaminase [Bacillus anthracis str. 'Ames Ancestor'] gi|49181283|gb|AAT56659.1| porphobilinogen deaminase [Bacillus anthracis str. Sterne] gi|164712239|gb|EDR17775.1| porphobilinogen deaminase [Bacillus anthracis str. A0488] gi|167511285|gb|EDR86671.1| porphobilinogen deaminase [Bacillus anthracis str. A0193] gi|170126727|gb|EDS95610.1| porphobilinogen deaminase [Bacillus anthracis str. A0389] gi|172081054|gb|EDT66132.1| porphobilinogen deaminase [Bacillus anthracis str. A0174] gi|190561906|gb|EDV15875.1| porphobilinogen deaminase [Bacillus anthracis Tsiankovskii-I] gi|227006938|gb|ACP16681.1| hydroxymethylbilane synthase [Bacillus anthracis str. CDC 684] gi|229266265|gb|ACQ47902.1| hydroxymethylbilane synthase [Bacillus anthracis str. A0248] Length = 309 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASYKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+ Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 239 GGCQVPIAGYATITENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|15838228|ref|NP_298916.1| porphobilinogen deaminase [Xylella fastidiosa 9a5c] gi|11386846|sp|Q9PCX7|HEM3_XYLFA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|9106679|gb|AAF84436.1|AE003989_13 hydroxymethylbilane synthase [Xylella fastidiosa 9a5c] Length = 305 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 103/301 (34%), Positives = 160/301 (53%), Gaps = 4/301 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LA+ + + L + P ++V++P+ST+GD I +R+L IGGKGLF Sbjct: 4 LRIATRKSLLAMWQSEYVAARLRMLR--PDLDVVLVPMSTRGDEILDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ G+ DCAVHS KD+P L ++A L R+D D IS+ SL+ L + + Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 + TSSLRR+A L +R D+ + D RG + TRL KL+N AI+LA AG++RL E+ + Sbjct: 122 RVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNGDYDAIVLACAGLRRLGLEQRM 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L ++ P+PGQGAI +E+ + + L+ ++ T V ER L GSC Sbjct: 182 TARLAPPEWLPAPGQGAIAVESLTEDARIGTLLAGLDDLPTRQCVVAERTMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIVLAS-DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A + + G+V DG + + +GR AQ + + Sbjct: 242 VPVGAYASYEVGGMRLQGLVGCVADG-RLVRAELCSAKDEGDMLGRAVAQCLLDAGAAEL 300 Query: 305 F 305 Sbjct: 301 L 301 >gi|226326699|ref|ZP_03802217.1| hypothetical protein PROPEN_00552 [Proteus penneri ATCC 35198] gi|225204920|gb|EEG87274.1| hypothetical protein PROPEN_00552 [Proteus penneri ATCC 35198] Length = 291 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 106/290 (36%), Positives = 156/290 (53%), Gaps = 2/290 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLA+ A + L H P + ++P+ TKGD I + L ++GG Sbjct: 1 MSKSTIRIATRQSPLAMWQALYVKEQLQLTH--PGLVVELVPMVTKGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+ +L++ Sbjct: 59 KGLFVKELELALLESRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYNALEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL+KL+N AI+LA AG+KRL Sbjct: 119 LPAGSIVGTSSLRRQCQLKAQRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ L+ E P+ GQGA+ I +N+ + + L +NH T V +RA L Sbjct: 179 LNERIRTPLSAEQSLPAVGQGAVGIGRQLNDNETRHLFDALNHSPTAILVKIKRAMNTRL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 +G C+ I +A + + F +V + DG+ + N G Sbjct: 239 EGGCQVPIGTYAIWQDDKILFGALVGSPDGENIFRGELLVTPENDKNRGH 288 >gi|218905666|ref|YP_002453500.1| porphobilinogen deaminase [Bacillus cereus AH820] gi|228917102|ref|ZP_04080660.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929511|ref|ZP_04092530.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935783|ref|ZP_04098595.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229124004|ref|ZP_04253196.1| Porphobilinogen deaminase [Bacillus cereus 95/8201] gi|254724608|ref|ZP_05186391.1| porphobilinogen deaminase [Bacillus anthracis str. A1055] gi|226740627|sp|B7JQ57|HEM3_BACC0 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|218537761|gb|ACK90159.1| porphobilinogen deaminase [Bacillus cereus AH820] gi|228659306|gb|EEL14954.1| Porphobilinogen deaminase [Bacillus cereus 95/8201] gi|228823840|gb|EEM69660.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830090|gb|EEM75708.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842520|gb|EEM87610.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 309 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+ Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 239 GGCQVPIAGYATITENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|206969979|ref|ZP_03230933.1| porphobilinogen deaminase [Bacillus cereus AH1134] gi|229192675|ref|ZP_04319634.1| Porphobilinogen deaminase [Bacillus cereus ATCC 10876] gi|206735667|gb|EDZ52835.1| porphobilinogen deaminase [Bacillus cereus AH1134] gi|228590765|gb|EEK48625.1| Porphobilinogen deaminase [Bacillus cereus ATCC 10876] Length = 309 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 163/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+ Sbjct: 179 DEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAITERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEEVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|122842|sp|P13446|HEM3_EUGGR RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase; Flags: Precursor gi|18412|emb|CAA33759.1| unnamed protein product [Euglena gracilis] Length = 480 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 105/322 (32%), Positives = 162/322 (50%), Gaps = 21/322 (6%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K R+ TR SPLA+ A +S L + P + + P+ST+GD+I + L ++GGKGL Sbjct: 150 KTVRVATRKSPLAMWQAEFIQSELERL--WPGITVELQPMSTRGDKILDSPLAKVGGKGL 207 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKD 120 F +E+E L+ D AVHS KD+P +L +GL + R D D + +SL+D Sbjct: 208 FVKELETALLENRSDIAVHSTKDVPMELPEGLVLGVICKRHDPCDAIVFPKGSNLKSLED 267 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR+ LL R D+ ++ RG + TRL KL++ AI+LA AG+KRL Sbjct: 268 LPHGARVGTSSLRRQCQLLLKRPDLKFLELRGNVNTRLAKLDSGDYDAIILAAAGLKRLG 327 Query: 181 KEKV----IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 I++ P+ GQGA+ IE N+P+ L++ ++H +V CERA Sbjct: 328 FSDRVLPGETNIIDPNVMCPAAGQGALSIELRTNDPEIAALLEPLHHIPDAVTVACERAM 387 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK-------IFHEVSRNGNR-----CD 284 L+G C+ I+GFA K L V + GK + +G + Sbjct: 388 NRRLNGGCQVPISGFAQLKDGQLRMEARVGSVTGKGPLIIQSKTFRLPWSGRTWPQLQKE 447 Query: 285 AINIGRDAAQYIRFISNKNVFN 306 + +G + A + + + Sbjct: 448 SEALGVEVADMLLADGAQAYLD 469 >gi|75759963|ref|ZP_00740032.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228902993|ref|ZP_04067133.1| Porphobilinogen deaminase [Bacillus thuringiensis IBL 4222] gi|74492560|gb|EAO55707.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228856669|gb|EEN01189.1| Porphobilinogen deaminase [Bacillus thuringiensis IBL 4222] Length = 309 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL L+ Sbjct: 179 DEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDAITERTVAAERVFLHRLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + T+ +V + DG + + + G + +G +AA + Sbjct: 239 GGCQVPIAGYATLKENDTIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAAGRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|229163420|ref|ZP_04291371.1| Porphobilinogen deaminase [Bacillus cereus R309803] gi|228619989|gb|EEK76864.1| Porphobilinogen deaminase [Bacillus cereus R309803] Length = 309 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 168/305 (55%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS +S KDLA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGESFKDLA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWD 178 Query: 183 -KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+ Sbjct: 179 GEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLSHMNDAVTERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG + + + G D + +G +AA + Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVAGT--DPVEVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|308070414|ref|YP_003872019.1| Porphobilinogen deaminase [Paenibacillus polymyxa E681] gi|305859693|gb|ADM71481.1| Porphobilinogen deaminase [Paenibacillus polymyxa E681] Length = 308 Score = 240 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 164/305 (53%), Gaps = 4/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPP--HNIVIIPLSTKGDRITNRTLTEIGG 60 + +G+R S LAL L + V+ + TKGDRI + TL+++GG Sbjct: 1 MRTIVVGSRQSALALTQTGHVIEDLNALCAEQGMDLQFVVKKILTKGDRILDVTLSKVGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ +++GEID AVHS KDMP++L +GL A RED RD I+ A+SL+D Sbjct: 61 KGLFVKEIEQAMLAGEIDMAVHSMKDMPSELPEGLVNGAVPHREDPRDCLITLGAKSLED 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR + + R D+ + RG I++RL KL AI+LA AG+ R+ Sbjct: 121 LPQGAKVGTSSLRRASQIKSMRPDLQLEPVRGNIDSRLKKLETEGFDAIILAAAGLHRMG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I + D P+ GQGA+ IE ++ + L+++ N DT +V ER FL L Sbjct: 181 WKERITSYIPEADCLPAVGQGALGIECRASDEELLALLRLYNDRDTSATVAAERTFLGVL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I A G + G+V + DG++ + + G D +G A + Sbjct: 241 NGGCQVPIGAHAVWAGQEISLTGMVGSPDGEVILKETLQG--NDPQKLGEAVAASLIAKG 298 Query: 301 NKNVF 305 + + Sbjct: 299 AEQIL 303 >gi|196034473|ref|ZP_03101882.1| porphobilinogen deaminase [Bacillus cereus W] gi|228948178|ref|ZP_04110462.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|195993015|gb|EDX56974.1| porphobilinogen deaminase [Bacillus cereus W] gi|228811536|gb|EEM57873.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 309 Score = 240 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+ Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAYINDAVTERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG I + + G D +G +AA + Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSILLKETVVGT--DPEKVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|229087029|ref|ZP_04219183.1| Porphobilinogen deaminase [Bacillus cereus Rock3-44] gi|228696292|gb|EEL49123.1| Porphobilinogen deaminase [Bacillus cereus Rock3-44] Length = 309 Score = 240 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S +LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPDGLTIGCIPKRVDPRDAFISKNGESFAELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 + +GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ Sbjct: 119 EGATLGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + VI E L+ P+ GQGA+ IE ++ +L+ IN T +V+ ER FL +L+ Sbjct: 179 DDVITEHLDETLCVPAVGQGALAIECRGDDKDLLQLLSHINDGVTERTVSAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + + +V + +G + + + G D +G +AA + Sbjct: 239 GGCQVPIAGYATLQENNEIELTALVGSVEGSVLLKETVTG--MDPEQVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|229093561|ref|ZP_04224662.1| Porphobilinogen deaminase [Bacillus cereus Rock3-42] gi|228689770|gb|EEL43576.1| Porphobilinogen deaminase [Bacillus cereus Rock3-42] Length = 309 Score = 240 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+ Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG I + + G D +G +AA + Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSILLKETVVGT--DPEKVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|195953610|ref|YP_002121900.1| porphobilinogen deaminase [Hydrogenobaculum sp. Y04AAS1] gi|195933222|gb|ACG57922.1| porphobilinogen deaminase [Hydrogenobaculum sp. Y04AAS1] Length = 285 Score = 240 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 114/293 (38%), Positives = 172/293 (58%), Gaps = 9/293 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+GTR S LAL A +S L + I ++ ++T GD+I + L++IGGKGLF Sbjct: 2 KLRLGTRKSKLALWQANFVKSKLEAL----GLEIELVLITTTGDKILDTPLSKIGGKGLF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE L+ EID AVHS KD+P + +GL + +L RED +D F+S + ++L +L + Sbjct: 58 VKEIENALMEDEIDFAVHSLKDVPAFIPQGLVVDVFLEREDPKDAFVSKSYKTLNELPPN 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGTSS+RRK LL+ R D+++ D RG ++TRL KL + AI+LA AG+KRL E V Sbjct: 118 AKIGTSSIRRKVQLLQRRKDLTIEDLRGNVDTRLKKLEDGLYDAIILASAGLKRLGFEGV 177 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L+ F P+ GQG + IE +N + ++K INHE T+ ER+FL ++GSC Sbjct: 178 ISSYLD---FIPAVGQGIVAIEYKASNKELSNILKQINHEPTYICALAERSFLETVEGSC 234 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + + A + G + DG + E++ G D I +G+D A+ + Sbjct: 235 QIPMGAHATLAQDLIKIRGFIANEDGTNYRELTLEGK--DPIGLGKDLAKNLL 285 >gi|118479630|ref|YP_896781.1| porphobilinogen deaminase [Bacillus thuringiensis str. Al Hakam] gi|196039380|ref|ZP_03106686.1| hydroxymethylbilane synthase [Bacillus cereus NVH0597-99] gi|196044836|ref|ZP_03112070.1| porphobilinogen deaminase [Bacillus cereus 03BB108] gi|225866445|ref|YP_002751823.1| porphobilinogen deaminase [Bacillus cereus 03BB102] gi|229186706|ref|ZP_04313864.1| Porphobilinogen deaminase [Bacillus cereus BGSC 6E1] gi|158512516|sp|A0RJ81|HEM3_BACAH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800233|sp|C1ETR0|HEM3_BACC3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|118418855|gb|ABK87274.1| hydroxymethylbilane synthase [Bacillus thuringiensis str. Al Hakam] gi|196024324|gb|EDX62997.1| porphobilinogen deaminase [Bacillus cereus 03BB108] gi|196030007|gb|EDX68608.1| hydroxymethylbilane synthase [Bacillus cereus NVH0597-99] gi|225787726|gb|ACO27943.1| hydroxymethylbilane synthase [Bacillus cereus 03BB102] gi|228596719|gb|EEK54381.1| Porphobilinogen deaminase [Bacillus cereus BGSC 6E1] Length = 309 Score = 240 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+ Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|92116183|ref|YP_575912.1| porphobilinogen deaminase [Nitrobacter hamburgensis X14] gi|123387219|sp|Q1QQP5|HEM3_NITHX RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|91799077|gb|ABE61452.1| porphobilinogen deaminase [Nitrobacter hamburgensis X14] Length = 316 Score = 240 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 137/299 (45%), Positives = 190/299 (63%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 IGTR S LALA A E R L H++ P IVI + T GD I +R L ++GGKGLFT+ Sbjct: 12 TIGTRGSALALAQANEVRDRLARAHQVAPERIVIKTIRTSGDAIQDRPLFDVGGKGLFTK 71 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE+ L++G ID AVHS+KD+PT L + A+LPRED+RD FIS A SL DL S+ Sbjct: 72 EIEEALLAGSIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDAFISPRAASLNDLPAGSI 131 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GT+SLRR+A++LR R D+ V RG +ETRL KL +A A LLA AG+ RL + Sbjct: 132 VGTASLRRQAMVLRLRPDLKVSVIRGNVETRLRKLVAGEADATLLALAGLNRLGLQDRAT 191 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 IL ++F P+ GQGAI IE+ ++ + VK I +T +++ ER+FLA LDGSC++ Sbjct: 192 RILETDEFLPAVGQGAIAIESRRDDDRINAFVKAIGDSETEVALSAERSFLALLDGSCRT 251 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 I G G ++F G++++ DG +E +R G R DA +G DAA+ +R + + F Sbjct: 252 PIGGHCRVNGDRIHFRGLIISPDGTQSYETTREGARADAAALGADAARELRERAGEKFF 310 >gi|15241573|ref|NP_196445.1| HEMC (HYDROXYMETHYLBILANE SYNTHASE); hydroxymethylbilane synthase [Arabidopsis thaliana] gi|2495179|sp|Q43316|HEM3_ARATH RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase; Flags: Precursor gi|16930521|gb|AAL31946.1|AF419614_1 AT5g08280/F8L15_10 [Arabidopsis thaliana] gi|313150|emb|CAA51941.1| hydroxymethylbilane synthase [Arabidopsis thaliana] gi|313838|emb|CAA52061.1| hydroxymethylbilane synthase [Arabidopsis thaliana] gi|10178270|emb|CAC08328.1| hydroxymethylbilane synthase [Arabidopsis thaliana] gi|17979402|gb|AAL49926.1| putative hydroxymethylbilane synthase [Arabidopsis thaliana] gi|21689853|gb|AAM67570.1| putative hydroxymethylbilane synthase [Arabidopsis thaliana] gi|332003894|gb|AED91277.1| Porphobilinogen deaminase [Arabidopsis thaliana] Length = 382 Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 133/306 (43%), Positives = 186/306 (60%), Gaps = 6/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A+ETR L H + I I + T GD+I ++ L +IGGKGL Sbjct: 75 IRIGTRGSPLALAQAYETREKLKKKHPELVEDGAIHIEIIKTTGDKILSQPLADIGGKGL 134 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+G ID AVHS KD+PT L + + LPRED+RD FI TA +L +L Sbjct: 135 FTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFICLTAATLAELPA 194 Query: 124 HSVIGTSSLRRKALLLRWRSDISV-IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SV+GT+SLRRK+ +L + V +FRG ++TRL+KL K A LLA AG+KRL Sbjct: 195 GSVVGTASLRRKSQILHKYPALHVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSMT 254 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + IL++++ P+ QGAI I ++ K + +NHE+T +++CERAFL LDG Sbjct: 255 ENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDG 314 Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFI 299 SC++ IAG+A + F G+V + DG E SR G D + +G+DA Q + Sbjct: 315 SCRTPIAGYASKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLSR 374 Query: 300 SNKNVF 305 + F Sbjct: 375 AGPGFF 380 >gi|319942681|ref|ZP_08016988.1| hydroxymethylbilane synthase [Sutterella wadsworthensis 3_1_45B] gi|319803764|gb|EFW00699.1| hydroxymethylbilane synthase [Sutterella wadsworthensis 3_1_45B] Length = 309 Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 98/299 (32%), Positives = 159/299 (53%), Gaps = 2/299 (0%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 I TR SPLA+ A ++ L D + P + ++ ++T+GD+I +RTL+++GGKGLF + Sbjct: 8 VIATRESPLAMWQALHVQALLRDRY--PGAEVELLGMTTRGDQILDRTLSKVGGKGLFVK 65 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 E+E ++ G D AVHS KD+P +L +G ++ A RED RD F+S SL D+ + Sbjct: 66 ELEAAMLEGRADLAVHSLKDVPMELPEGFELVAVSEREDPRDAFVSPKYASLDDMPAGAR 125 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GT+SLRR+ +L + V+ RG + TRL KL+ + A+++A AG+KRL I+ Sbjct: 126 VGTASLRRELMLRMRYPHLEVLPVRGNVGTRLRKLDEGQFDALVMASAGLKRLGLGDRIR 185 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 +I+ E P+PGQGA+ IE + K + + IN +T ERA L GSC+ Sbjct: 186 QIIPAEVSLPAPGQGALGIEIRKGDEKMEAALGFINSPETRACCMAERAVSRALGGSCQV 245 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A +A + L+ +V G + + + +R ++ Sbjct: 246 PLAAYAVVENGELWLRALVGNHKEGKAAFTQARGPLAEPEALAARVVEDLRRQGAEDYL 304 >gi|294507567|ref|YP_003571625.1| Porphobilinogen deaminase [Salinibacter ruber M8] gi|294343895|emb|CBH24673.1| Porphobilinogen deaminase [Salinibacter ruber M8] Length = 323 Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 101/310 (32%), Positives = 166/310 (53%), Gaps = 8/310 (2%) Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M P +GTR S LAL A RS L H + + ++T+GD T+ ++EIG Sbjct: 1 MSISDPLVLGTRGSELALRQANVVRSRLEAA----GHRVELETITTRGDEATDTPISEIG 56 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT--AQS 117 + +FT+E+++ L+ G +D AVHS KD+P+ + GL ++A RED RD F++H Sbjct: 57 DEAVFTKELDRALLQGGVDLAVHSLKDIPSTVPSGLALAAIGEREDPRDAFVAHPSFDGH 116 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L DL + + T+SLRR A LL WRSD+ V+ RG ++TRL KL+ + ++LA AG+ Sbjct: 117 LHDLPEGATVATASLRRTAQLLTWRSDLEVVPVRGNVDTRLEKLSESDWTGMVLAVAGLV 176 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL-VKVINHEDTWDSVNCERAF 236 RL I++ ++ P+ GQGA+ I + ++L + ++H + + N ERAF Sbjct: 177 RLGLSLHIRDRIDPSLIVPAVGQGALGIACREDQDALRDLLRETLHHAPSGHAANAERAF 236 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L ++ G C+ + +A+ TL + A DG + R D +GR+ A + Sbjct: 237 LKKVGGGCQVPLGAWAHIDDGTLVLDACIAALDGSEHYRDERRCAPEDGAAVGRELAADL 296 Query: 297 RFISNKNVFN 306 + ++ + Sbjct: 297 LAMGGDHILD 306 >gi|42783601|ref|NP_980848.1| porphobilinogen deaminase [Bacillus cereus ATCC 10987] gi|55976457|sp|Q72ZW2|HEM3_BACC1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|42739530|gb|AAS43456.1| porphobilinogen deaminase [Bacillus cereus ATCC 10987] Length = 309 Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+ Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDGVTEKTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|71899004|ref|ZP_00681170.1| Porphobilinogen deaminase [Xylella fastidiosa Ann-1] gi|71731250|gb|EAO33315.1| Porphobilinogen deaminase [Xylella fastidiosa Ann-1] Length = 305 Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 103/301 (34%), Positives = 160/301 (53%), Gaps = 4/301 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LA+ + + L + P ++V++P+ST+GD I +R+L IGGKGLF Sbjct: 4 LRIATRKSLLAMWQSEYVAARLRML--CPDLDVVLVPMSTRGDEILDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ G+ DCAVHS KD+P L ++A L R+D D IS+ SL+ L + + Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 + TSSLRR+A L +R D+ + D RG + TRL KL+N AI+LA AG++RL E+ + Sbjct: 122 RVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNGDYDAIVLACAGLRRLGLEQRM 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L ++ P+PGQGAI +E+ + + L+ ++ T V ER L GSC Sbjct: 182 TARLAPPEWLPAPGQGAIAVESLTEDARIATLLAGLDDLPTRQCVVAERTMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIVLAS-DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A + + G+V DG + + +GR AQ + + Sbjct: 242 VPVGAYASYEVGGMRLQGLVGCVADG-RLVRAELCSAKDEGDMLGRAVAQCLLDAGAAEL 300 Query: 305 F 305 Sbjct: 301 L 301 >gi|229147034|ref|ZP_04275394.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST24] gi|228636422|gb|EEK92892.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST24] Length = 309 Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+ Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDTITERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG + + + G + +G +AA + Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|229111935|ref|ZP_04241479.1| Porphobilinogen deaminase [Bacillus cereus Rock1-15] gi|228671499|gb|EEL26799.1| Porphobilinogen deaminase [Bacillus cereus Rock1-15] Length = 309 Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEEYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+ Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDTITERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG + + + G + +G +AA + Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|296446253|ref|ZP_06888200.1| porphobilinogen deaminase [Methylosinus trichosporium OB3b] gi|296256290|gb|EFH03370.1| porphobilinogen deaminase [Methylosinus trichosporium OB3b] Length = 308 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 128/297 (43%), Positives = 168/297 (56%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M IGTR SPLALA E R L P + I + T GD I +R L E GG Sbjct: 1 MTTAILTIGTRGSPLALAQTHEVRRLLAAALGAPEEALPIEIIRTTGDMIQDRPLAESGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT E++ L G ID AVHS+KD+PT L + I+ +LPRED+RD +I SL D Sbjct: 61 KGLFTRELDIALAEGRIDLAVHSSKDLPTHLPPEIAIAGFLPREDVRDAWIGRGGASLAD 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT+SLRR A + R R D+SV RG +ETRL+K+ + + LLA AG+KRL Sbjct: 121 LPQGAVVGTASLRRGAQVKRLRPDVSVTLLRGNVETRLHKVESGEVDGTLLALAGLKRLG 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 IL +EDF P+ GQGAI I + + ++ + I T ++ ERAFL L Sbjct: 181 LADKATAILPLEDFLPAAGQGAIAITKRAGDARTRDALAPILDAATGAALAAERAFLTVL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 DGSC++ IA A G + F+G+ L +DG +E R G DA +G DAA I Sbjct: 241 DGSCRTPIAAHARVDGDAMEFHGLALRADGSEIYEARRRGAAIDAARLGDDAANEIL 297 >gi|49478646|ref|YP_038514.1| porphobilinogen deaminase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|55976410|sp|Q6HD62|HEM3_BACHK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|49330202|gb|AAT60848.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 309 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+ Sbjct: 179 DEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG I + + G D +G +AA + Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSILLKETVVGT--DPEKVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|254488942|ref|ZP_05102147.1| porphobilinogen deaminase [Roseobacter sp. GAI101] gi|214045811|gb|EEB86449.1| porphobilinogen deaminase [Roseobacter sp. GAI101] Length = 297 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 123/291 (42%), Positives = 165/291 (56%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 +A A ETR+ L +P I+ + GD I +R L EIGGKGLFT EIE+ L++G+ Sbjct: 1 MAQAVETRARLSAAFDLPLTAFEIVVIKVTGDMIQDRPLKEIGGKGLFTREIEEDLLAGK 60 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 ID AVHS KDMPT GL + YLPRED RD F++ +L L +V+GTSSLRR+A Sbjct: 61 IDIAVHSMKDMPTVQPGGLLLDTYLPREDPRDAFVAPLMSALDQLTEGAVVGTSSLRRRA 120 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 LL R D+ V++FRG ++TRL KL + A LA AG+ RL E V ++ D P Sbjct: 121 QLLHKRPDLQVVEFRGNVQTRLRKLADGVAECTFLAMAGLNRLGMENVPATPIDDTDMLP 180 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + QGAI IE + + L+ I+ T + ERAFL LDGSC++ IAG A G Sbjct: 181 AVAQGAIGIERRAGDLDTEALLAAIHDTPTGQRLIAERAFLLTLDGSCETPIAGLATLDG 240 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307 TL+ G VL DG R+G D +G D A+ + + N F++ Sbjct: 241 DTLHLRGEVLRPDGSEVISGDRSGPIGDGGQMGVDLARELLSQAGPNFFDW 291 >gi|283780135|ref|YP_003370890.1| porphobilinogen deaminase [Pirellula staleyi DSM 6068] gi|283438588|gb|ADB17030.1| porphobilinogen deaminase [Pirellula staleyi DSM 6068] Length = 311 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 113/301 (37%), Positives = 173/301 (57%), Gaps = 4/301 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+GTR SPLA A R L+ ++ +I ++T+GD+ T++ L +IGG+GLF Sbjct: 6 KLRLGTRASPLARWQADWVRDQLIAA----GIDVEMILITTEGDQQTSQPLGQIGGQGLF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+EI+++L++G+ID AVHS KD+PT + GL ++A RED D+ I SL L Sbjct: 62 TKEIQRRLLAGDIDLAVHSLKDLPTLPIDGLSLAAVPEREDTADILIGPAGTSLATLPSG 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGT SLRRKA LL R+D+ ++D RG ++TRL KL+ + HAI+LA AG+KRLK + Sbjct: 122 AKIGTGSLRRKAQLLHARADLEILDIRGNVDTRLRKLDEGQYHAIILAAAGLKRLKLDDR 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E L P+ GQGA+ IE+ ++P ++L+ ++H T +V ER+ LA L C Sbjct: 182 MTERLEAPLMLPAVGQGALGIESRSDDPTTRKLLAPLSHAPTLQAVIAERSLLAALRAGC 241 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + + A L +VL+ DG+ S DA +G + A+ +R + Sbjct: 242 LAPVGAHAQVVDGQLTLAAVVLSIDGQSRLFASLTSAPADAAQLGEEVAELLRQQGATEL 301 Query: 305 F 305 Sbjct: 302 L 302 >gi|229019689|ref|ZP_04176496.1| Porphobilinogen deaminase [Bacillus cereus AH1273] gi|229025928|ref|ZP_04182320.1| Porphobilinogen deaminase [Bacillus cereus AH1272] gi|228735374|gb|EEL85977.1| Porphobilinogen deaminase [Bacillus cereus AH1272] gi|228741596|gb|EEL91789.1| Porphobilinogen deaminase [Bacillus cereus AH1273] Length = 309 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 166/305 (54%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + +S KDLA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGESFKDLA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+ Sbjct: 179 DEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDAVTERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 239 GGCQVPIAGYATLKEDDAIELTALVGSMDGSVLLKETVVGT--DPKQVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|300087569|ref|YP_003758091.1| porphobilinogen deaminase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527302|gb|ADJ25770.1| porphobilinogen deaminase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 301 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 107/304 (35%), Positives = 155/304 (50%), Gaps = 3/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+G+R S LALA A ++ L P I+ +ST+GDR ++ E+ G G Sbjct: 1 MRKIRLGSRSSRLALAQAEYLQARLRAA--FPEVEFDIVRISTQGDRNRLVSMGELPGVG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 F +EIE L +GE D AVHS KD+P +L ++A RED RDV IS + + L Sbjct: 59 FFVKEIESALAAGEADIAVHSLKDVPVELPPEFILAAVPEREDTRDVLISRGRKLDQ-LP 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +V+G+ SLRR + R D+ V RG IETR+ + + A++LA AG+ RL E Sbjct: 118 VGAVVGSDSLRRSFQIRARRPDVEVRSIRGNIETRIKAVEEGRVDAVILAAAGLHRLGLE 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E L + +F P PGQ A+ IE N+ ++E +NH T +V ER+FL L G Sbjct: 178 TRIDEYLPLTEFLPPPGQAALGIEVRKNDDFSRETAGAVNHPPTCLAVTAERSFLRRLGG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C++ IA +G L G+V G+ S +G A +G A+ I Sbjct: 238 GCRAPIAALGTVEGDVLTLRGMVADEAGRNIISRSLSGTASAAEAVGGALAEMILEAGAN 297 Query: 303 NVFN 306 N Sbjct: 298 KYIN 301 >gi|268679946|ref|YP_003304377.1| porphobilinogen deaminase [Sulfurospirillum deleyianum DSM 6946] gi|268617977|gb|ACZ12342.1| porphobilinogen deaminase [Sulfurospirillum deleyianum DSM 6946] Length = 314 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 160/305 (52%), Gaps = 5/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR S LAL + ++ L H P + + + TKGD+I + L +IGGKG Sbjct: 1 MKKLIIATRGSKLALWQSEHVKAELEKAH--PHLAVELSIMMTKGDKILDTPLAKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E+ ++ GE AVHS KD+P + +GL++ RED+RD +S L+DL Sbjct: 59 LFTKELEEAMLRGEAHIAVHSLKDVPMEFPEGLKLGVITKREDVRDAMLSEKYGCLEDLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GT+SLRR+ LL+ R D + + RG + TR+ KL + AI+LA AGIKRL + Sbjct: 119 QGAVVGTTSLRRRMQLLKLRPDFVIKNLRGNVNTRIRKLKEGEFDAIILASAGIKRLGLQ 178 Query: 183 KVIKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + ++ I E P+ GQ A+ IE N + + LV V+ ED ER F+ L Sbjct: 179 EEVRYFTPISKEVMIPASGQAALGIEIVDNA-EVERLVSVLKDEDAMIETRVERDFVTLL 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I A +L+ I+ DG +G R + +G+ AQ + Sbjct: 238 EGGCQVPIGVNAEVTQESLHVKAILGLPDGSQMMCEVMSGKREEFETLGKVLAQKVIDKG 297 Query: 301 NKNVF 305 K + Sbjct: 298 AKELL 302 >gi|218899632|ref|YP_002448043.1| porphobilinogen deaminase [Bacillus cereus G9842] gi|228967567|ref|ZP_04128593.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar sotto str. T04001] gi|226740628|sp|B7IIX5|HEM3_BACC2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|218545857|gb|ACK98251.1| porphobilinogen deaminase [Bacillus cereus G9842] gi|228792146|gb|EEM39722.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar sotto str. T04001] Length = 309 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+ Sbjct: 179 DEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDAITERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + T+ +V + DG + + + G + +G +AA + Sbjct: 239 GGCQVPIAGYATLKENDTIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAAGRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|52141043|ref|YP_085787.1| porphobilinogen deaminase [Bacillus cereus E33L] gi|61213349|sp|Q633Y0|HEM3_BACCZ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|51974512|gb|AAU16062.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Bacillus cereus E33L] Length = 309 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+ Sbjct: 179 DEVITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|30022552|ref|NP_834183.1| porphobilinogen deaminase [Bacillus cereus ATCC 14579] gi|218235229|ref|YP_002369271.1| porphobilinogen deaminase [Bacillus cereus B4264] gi|229129756|ref|ZP_04258723.1| Porphobilinogen deaminase [Bacillus cereus BDRD-Cer4] gi|229152666|ref|ZP_04280854.1| Porphobilinogen deaminase [Bacillus cereus m1550] gi|296504955|ref|YP_003666655.1| porphobilinogen deaminase [Bacillus thuringiensis BMB171] gi|39931461|sp|Q817R0|HEM3_BACCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226740629|sp|B7HE96|HEM3_BACC4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|29898110|gb|AAP11384.1| Porphobilinogen deaminase [Bacillus cereus ATCC 14579] gi|218163186|gb|ACK63178.1| hydroxymethylbilane synthase [Bacillus cereus B4264] gi|228630812|gb|EEK87453.1| Porphobilinogen deaminase [Bacillus cereus m1550] gi|228653672|gb|EEL09543.1| Porphobilinogen deaminase [Bacillus cereus BDRD-Cer4] gi|296326007|gb|ADH08935.1| porphobilinogen deaminase [Bacillus thuringiensis BMB171] Length = 309 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 K-VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+ Sbjct: 179 NDVITEHLDDTLCVPAVGQGALAIECREDDKDLLQLLAHINDTITERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG + + + G + +G +AA + Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|28199044|ref|NP_779358.1| porphobilinogen deaminase [Xylella fastidiosa Temecula1] gi|182681767|ref|YP_001829927.1| porphobilinogen deaminase [Xylella fastidiosa M23] gi|32129567|sp|Q87CC9|HEM3_XYLFT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238059005|sp|B2I5K8|HEM3_XYLF2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|28057142|gb|AAO29007.1| hydroxymethylbilane synthase [Xylella fastidiosa Temecula1] gi|182631877|gb|ACB92653.1| porphobilinogen deaminase [Xylella fastidiosa M23] gi|307580196|gb|ADN64165.1| porphobilinogen deaminase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 305 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 103/301 (34%), Positives = 160/301 (53%), Gaps = 4/301 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LA+ + + L + P ++V++P+ST+GD I +R+L IGGKGLF Sbjct: 4 LRIATRKSLLAMWQSEYVAARLRML--CPDLDVVLVPMSTRGDEILDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ G+ DCAVHS KD+P L ++A L R+D D IS+ SL+ L + + Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 + TSSLRR+A L +R D+ + D RG + TRL KL+N AI+LA AG++RL E+ + Sbjct: 122 RVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNGDYDAIVLACAGLRRLGLEQRM 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L ++ P+PGQGAI +E+ + + L+ ++ T V ER L GSC Sbjct: 182 TARLAPPEWLPAPGQGAIAVESLTEDARIGTLLAGLDDLPTRKCVIAERTMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIVLAS-DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A + + G+V DG + + +GR AQ + + Sbjct: 242 VPVGAYASYEVGGMRLQGLVGCVADG-RLVRAELCSAKDEGDMLGRAVAQCLLDAGAAEL 300 Query: 305 F 305 Sbjct: 301 L 301 >gi|229048181|ref|ZP_04193750.1| Porphobilinogen deaminase [Bacillus cereus AH676] gi|228723168|gb|EEL74544.1| Porphobilinogen deaminase [Bacillus cereus AH676] Length = 309 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 K-VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+ Sbjct: 179 NDVITEHLDDTLCVPAVGQGALAIECREDDKDLLQLLAYINDTITERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG + + + G + +G +AA + Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|171463846|ref|YP_001797959.1| porphobilinogen deaminase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193384|gb|ACB44345.1| porphobilinogen deaminase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 321 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 101/305 (33%), Positives = 169/305 (55%), Gaps = 5/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LA+ A + L ++ P ++ I+ ++T+GD+I +R L+++GGKGL Sbjct: 14 KRLVIASRESRLAMWQAEHVQDCLKKLY--PDCDVQILGMTTRGDQILDRALSKVGGKGL 71 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L G D AVHS KD+P + +G ++ + RED RD F+S+ SL+DL + Sbjct: 72 FVKELETALEDGRADLAVHSLKDVPMVMPEGFDLACVMAREDARDAFVSNDYASLEDLPI 131 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+++L + + RG ++TR+ KL+ + AI+LA AG+KRL E Sbjct: 132 GAIVGTSSLRRESVLRAKFPHLVIQPLRGNLDTRMGKLDKGEYQAIILAAAGLKRLGLES 191 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L + + P+ GQGA+ IET +P ++ + +N T +V+ ER +L GS Sbjct: 192 RIRAFLPYDPYTPAAGQGALGIETLSKHPNIKQWLAPLNDLPTLFAVSAERMVSRQLGGS 251 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFIS 300 C+ +A A + + V ++DGK + + DA +G AQ + Sbjct: 252 CEVPLAAHAVRDQNQMQIRSFVASTDGKAICLAHGSALVESVEDAEALGLAVAQDLLSQG 311 Query: 301 NKNVF 305 ++ Sbjct: 312 AADLI 316 >gi|152990765|ref|YP_001356487.1| porphobilinogen deaminase [Nitratiruptor sp. SB155-2] gi|166217777|sp|A6Q3S1|HEM3_NITSB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|151422626|dbj|BAF70130.1| porphobilinogen deaminase [Nitratiruptor sp. SB155-2] Length = 310 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 102/304 (33%), Positives = 158/304 (51%), Gaps = 10/304 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LAL + ++ L + + + TKGD+I + L IGGKGLF Sbjct: 2 KLTIATRGSKLALWQSNHIKAQLESF----GYEVELKIFKTKGDKILDTPLALIGGKGLF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E ++ GE D AVHS KD+PT+L +GL + A RE D +S ++L DL + Sbjct: 58 TKELEDAMLRGEADLAVHSLKDVPTELPEGLVLGAITKREMTNDSLLSEQYETLADLPPN 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK--E 182 +V+GT+SLRR+ LL R DI + D RG ++TR+NKL N + AI+LAYAG+KRL Sbjct: 118 AVVGTTSLRRRMQLLHLRPDICIKDLRGNVDTRINKLKNGEFDAIILAYAGLKRLGILES 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ P+ GQ A+ IE P ++VK +N E + ER F+ L G Sbjct: 178 VRYVHPIDENTMIPAMGQAALGIEC---RPDVVDVVKKLNDEKSAIETFIERDFIDRLQG 234 Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C+ I A + + + ++ DG + G++ + +G++ A+ + Sbjct: 235 GCQVPIGVRASLLENNDIIVKAVIGLPDGSELLKDKIFGSKENYHELGKELAESMIDNGA 294 Query: 302 KNVF 305 K + Sbjct: 295 KELL 298 >gi|324328367|gb|ADY23627.1| porphobilinogen deaminase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 309 Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+ Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDGVTEKTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLINQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|387506|gb|AAA39890.1| porphobilinogen deaminase (housekeeping) [Mus musculus] Length = 400 Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 105/338 (31%), Positives = 159/338 (47%), Gaps = 35/338 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA + L ++ P II +ST GD+I + L++IG K Sbjct: 56 KMRVIRVGTRKSQLARIQTETVVAMLKALY--PGIQFEIIAMSTTGDKIVDTALSKIGEK 113 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A R++ D + H ++L Sbjct: 114 SLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRQNPCDAVVFHPKFIGKTL 173 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177 + L S +GTSSLRR A L R ++ RG + TRL KL+ + AI+LA AG++ Sbjct: 174 ETLPEKSAVGTSSLRRVAQLQRKFPNLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQ 233 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 234 RMGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFL 293 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 294 RHLEGGCSVPVAVHTVIKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQ 353 Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 354 LVGITARNIPRGAQLAAENLGISLASLLLNKGAKNILD 391 >gi|27117223|emb|CAD48146.1| porphobilinogen deaminase [Bacillus megaterium] Length = 310 Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 120/306 (39%), Positives = 167/306 (54%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L P I + TKGD+I N TL+++GGKG Sbjct: 1 MRKIIVGSRRSKLALTQTKWVIEQLKKQGL--PFEFEIKEMVTKGDQILNVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ ++ EID AVHS KDMP L +GL I RED RD IS + ++L Sbjct: 59 LFVKEIEQAMLDKEIDMAVHSMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR A LL RSDI + RG I+TRL KL N AI+LA AG+ R+ Sbjct: 119 SGAVIGTSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNEDYDAIILAAAGLSRMGWS 178 Query: 183 KVI-KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 K + L E P+ GQGA+ IE N+ + L++ +NH++T +V ER FL E++ Sbjct: 179 KDTVTQYLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEME 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+ G + +V + DGK ++ G D I IG +AA+ + Sbjct: 239 GGCQVPIAGYGRILDGGNIELTSLVASPDGKTIYKEHITGK--DPIAIGSEAAERLTSQG 296 Query: 301 NKNVFN 306 K + + Sbjct: 297 AKLLID 302 >gi|75674669|ref|YP_317090.1| porphobilinogen deaminase [Nitrobacter winogradskyi Nb-255] gi|123745784|sp|Q3SVF3|HEM3_NITWN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|74419539|gb|ABA03738.1| porphobilinogen deaminase [Nitrobacter winogradskyi Nb-255] Length = 316 Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 136/299 (45%), Positives = 190/299 (63%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 IGTR SPLALA A E R L H++ P I I + T GD I +R L ++GGKGLFT+ Sbjct: 12 TIGTRGSPLALAQAHEVRDRLARAHQVAPERIAIKTIRTSGDAIQDRPLFDVGGKGLFTK 71 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE+ L++G ID AVHS+KD+PT L + A+LPRED+RDVFIS A SL DL + Sbjct: 72 EIEEALLAGTIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDVFISPHAGSLNDLPAGAT 131 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GT+SLRR+A++L+ R D+ V RG +ETRL K++ +A A LLA AG+ RL + Sbjct: 132 VGTASLRRQAMVLKLRPDLKVNSLRGNVETRLRKISVGEADATLLALAGLNRLGLQDKAT 191 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 IL ++F P+ GQGAI IE+ ++ + VK I +T +++ ER+FLA LDGSC++ Sbjct: 192 RILETDEFLPAVGQGAIAIESRRDDDRINAFVKAIGDPETEVALSAERSFLALLDGSCRT 251 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 I G G + F G++++ DG F+E +R G R DA +G DAA +R + + F Sbjct: 252 PIGGHCRVNGDRIDFRGLIISPDGTEFYETTREGARADAAALGADAAHELRERAGEKFF 310 >gi|228910299|ref|ZP_04074116.1| Porphobilinogen deaminase [Bacillus thuringiensis IBL 200] gi|228849359|gb|EEM94196.1| Porphobilinogen deaminase [Bacillus thuringiensis IBL 200] Length = 309 Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+ Sbjct: 179 DEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLSHINDAITERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + T+ +V + DG + + + G + +G +AA + Sbjct: 239 GGCQVPIAGYATLKENDTIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAAGRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|294501421|ref|YP_003565121.1| porphobilinogen deaminase [Bacillus megaterium QM B1551] gi|294351358|gb|ADE71687.1| porphobilinogen deaminase [Bacillus megaterium QM B1551] Length = 310 Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 118/306 (38%), Positives = 167/306 (54%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L P I + TKGD+I N TL+++GGKG Sbjct: 1 MRKIIVGSRRSKLALTQTKWVIEQLKKQGL--PFEFEIKEMVTKGDQILNVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ ++ EID AVHS KDMP L +GL I RED RD IS + ++L Sbjct: 59 LFVKEIEQAMLDKEIDMAVHSMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR A LL RSDI + RG I+TRL KL N AI+LA AG+ R+ Sbjct: 119 SGAVIGTSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNEDYDAIILAAAGLSRMGWS 178 Query: 183 KVI-KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 K + L E P+ GQGA+ IE N+ + L++ +NH++T +V ER FL E++ Sbjct: 179 KDTVTQYLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEME 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+ G + +V + DGK ++ G + + IG +AA+ + Sbjct: 239 GGCQVPIAGYGRILDGGNIELTSLVASPDGKTIYKEHITGK--NPVAIGSEAAERLTSQG 296 Query: 301 NKNVFN 306 K + + Sbjct: 297 AKLLID 302 >gi|109108914|ref|XP_001101764.1| PREDICTED: porphobilinogen deaminase isoform 6 [Macaca mulatta] Length = 391 Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 108/338 (31%), Positives = 160/338 (47%), Gaps = 35/338 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K Sbjct: 47 KMRVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEK 104 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 105 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTL 164 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177 + L SV+GTSSLRR A L R S + RG + TRL KL+ + AI+LA AG++ Sbjct: 165 ETLPEKSVVGTSSLRRAAQLQRKFSHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQ 224 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 225 RMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 284 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 285 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQDTMQATIHVPAQHEDGPEDDPQ 344 Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 345 LVGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 382 >gi|296216375|ref|XP_002754553.1| PREDICTED: porphobilinogen deaminase [Callithrix jacchus] Length = 361 Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 159/338 (47%), Gaps = 35/338 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 75 SLFTKELEHALERNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177 + L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++ Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQ 194 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + +IL+ E+ + GQGA+ +E + ++V V++ +T ERAFL Sbjct: 195 RMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDMVGVLHDPETLLRCIAERAFL 254 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 255 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQDTMQATIHVPAQHEDGPEDDPQ 314 Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 315 LVGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 352 >gi|222151551|ref|YP_002560707.1| porphobilinogen deaminase homolog [Macrococcus caseolyticus JCSC5402] gi|254800255|sp|B9E743|HEM3_MACCJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|222120676|dbj|BAH18011.1| porphobilinogen deaminase homolog [Macrococcus caseolyticus JCSC5402] Length = 307 Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 172/305 (56%), Gaps = 5/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L H P I I + TKGD+I N L+++GGKG Sbjct: 1 MRKIIVGSRRSKLALTQSQQFIDQLKRKH--PNLEIEIKEIVTKGDQIVNVQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L G ID A+HS KD+P+ L +GL + RED RD +I+ L +L Sbjct: 59 LFVKEIEQALYDGTIDFAIHSLKDVPSVLPEGLTLGCIPVREDARDAYIAKHHIPLHELK 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S++GTSSLRR A LL + + RG I+TRL KL + AI+LA AG+ R+ + Sbjct: 119 PGSIVGTSSLRRGAQLLDQYPHLEIKWIRGNIDTRLAKLRDEDYDAIILAAAGLNRMGWD 178 Query: 183 K-VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 K ++ E LN E P+ GQGA+ IE ++ + L+K ++ E+T ER FL +D Sbjct: 179 KSIVTEYLNPELMLPAIGQGALGIECRSDDAEVLALLKSVHDEETELCTEAERTFLRLMD 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC+ IAG A G ++ F G++++ DGK ++V+ +G + I IG A+ + Sbjct: 239 GSCQVPIAGHATMVGESIEFTGLIMSPDGKEKYKVTHSG--GNPIEIGTQVAKAMEQNGA 296 Query: 302 KNVFN 306 K + Sbjct: 297 KAIIE 301 >gi|21592624|gb|AAM64573.1| hydroxymethylbilane synthase [Arabidopsis thaliana] Length = 382 Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 132/306 (43%), Positives = 185/306 (60%), Gaps = 6/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A+ETR L H + I I + T GD+I ++ L +IGGKGL Sbjct: 75 IRIGTRGSPLALAQAYETREKLKKKHPELVEDGAIHIEIIKTTGDKILSQPLADIGGKGL 134 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+G ID AVHS K +PT L + + LPRED+RD FI TA +L +L Sbjct: 135 FTKEIDEALINGHIDIAVHSMKYVPTYLPEKTILPCNLPREDVRDAFICLTAATLAELPA 194 Query: 124 HSVIGTSSLRRKALLLRWRSDISV-IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SV+GT+SLRRK+ +L + V +FRG ++TRL+KL K A LLA AG+KRL Sbjct: 195 GSVVGTASLRRKSQILHKYPALHVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSMT 254 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + IL++++ P+ QGAI I ++ K + +NHE+T +++CERAFL LDG Sbjct: 255 ENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDG 314 Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFI 299 SC++ IAG+A + F G+V + DG E SR G D + +G+DA Q + Sbjct: 315 SCRTPIAGYASKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLSR 374 Query: 300 SNKNVF 305 + F Sbjct: 375 AGPGFF 380 >gi|11386777|sp|O69110|HEM3_PAEMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|3172405|gb|AAC18587.1| porphobilinogen deaminase [Paenibacillus macerans] Length = 324 Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats. Identities = 113/325 (34%), Positives = 169/325 (52%), Gaps = 26/325 (8%) Query: 1 MEKKPFRIGTRCSPLALAHAFETR---SSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57 M K+ +GTR S LAL + L H +P I + TKGDRI + TL++ Sbjct: 1 MTKRTIVVGTRQSQLALTQTEQVIGDLKELCRAHGLP-FEFEIKKIVTKGDRILDVTLSK 59 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 IGGKGLF +EIE+ ++ GEID AVHS KDMP+ L +GL R+D RD IS + Sbjct: 60 IGGKGLFVKEIEQAMLDGEIDMAVHSMKDMPSVLPEGLINGGVPLRKDPRDALISRSGLH 119 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L +L + +GTS+LRR + LL +R D+ + RG I++RL KL AI+LA AG++ Sbjct: 120 LHELPQGARVGTSTLRRSSQLLAYRPDLVLEPVRGNIDSRLRKLEEEGFDAIILAAAGLQ 179 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ E + L+ + P+ GQGA+ IE N+ + ++++ + N DT +V ER FL Sbjct: 180 RMGWENRVTAYLSADVCLPAVGQGALGIECRENDAELRDVLSLYNDPDTALTVAAERRFL 239 Query: 238 AELDGSCKSAIAGFAYCK--GST------------------LYFYGIVLASDGKIFHEVS 277 A L+G C+ IA +A + G + G+V ++DG+ + E Sbjct: 240 AVLNGGCQVPIAAYANLERAGGQAPEEGGRAAASQAPAALRIRLTGMVGSADGRGYFEGE 299 Query: 278 RNGNRCDAINIGRDAAQYIRFISNK 302 R D + G A + + Sbjct: 300 CR--REDPVAFGERIAGLLLAQGGR 322 >gi|122844|sp|P22907|HEM3_MOUSE RecName: Full=Porphobilinogen deaminase; Short=PBG-D; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 361 Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats. Identities = 105/338 (31%), Positives = 159/338 (47%), Gaps = 35/338 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA + L ++ P II +ST GD+I + L++IG K Sbjct: 17 KMRVIRVGTRKSQLARIQTETVVAMLKALY--PGIQFEIIAMSTTGDKIVDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A R++ D + H ++L Sbjct: 75 SLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRQNPCDAVVFHPKFIGKTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177 + L S +GTSSLRR A L R ++ RG + TRL KL+ + AI+LA AG++ Sbjct: 135 ETLPEKSAVGTSSLRRVAQLQRKFPNLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQ 194 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 195 RMGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFL 254 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 255 RHLEGGCSVPVAVHTVIKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQ 314 Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 315 LVGITARNIPRGAQLAAENLGISLASLLLNKGAKNILD 352 >gi|228954747|ref|ZP_04116769.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229071973|ref|ZP_04205183.1| Porphobilinogen deaminase [Bacillus cereus F65185] gi|229081729|ref|ZP_04214222.1| Porphobilinogen deaminase [Bacillus cereus Rock4-2] gi|229180740|ref|ZP_04308078.1| Porphobilinogen deaminase [Bacillus cereus 172560W] gi|228602718|gb|EEK60201.1| Porphobilinogen deaminase [Bacillus cereus 172560W] gi|228701574|gb|EEL54067.1| Porphobilinogen deaminase [Bacillus cereus Rock4-2] gi|228711132|gb|EEL63097.1| Porphobilinogen deaminase [Bacillus cereus F65185] gi|228804945|gb|EEM51542.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 309 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+ Sbjct: 179 DEVITEHLDEALCVPAVGQGALAIECREDDKDLLQLLAHINDTITERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG + + + G + +G +AA + Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|47566654|ref|ZP_00237476.1| porphobilinogen deaminase [Bacillus cereus G9241] gi|228960740|ref|ZP_04122379.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228987716|ref|ZP_04147827.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229158082|ref|ZP_04286152.1| Porphobilinogen deaminase [Bacillus cereus ATCC 4342] gi|47556684|gb|EAL15016.1| porphobilinogen deaminase [Bacillus cereus G9241] gi|228625401|gb|EEK82158.1| Porphobilinogen deaminase [Bacillus cereus ATCC 4342] gi|228771990|gb|EEM20445.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228798956|gb|EEM45931.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 309 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+ Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDGITEKTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--DPEKVGLEAADRLINQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|301055971|ref|YP_003794182.1| porphobilinogen deaminase [Bacillus anthracis CI] gi|300378140|gb|ADK07044.1| porphobilinogen deaminase [Bacillus cereus biovar anthracis str. CI] Length = 309 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGVPFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+ Sbjct: 179 DEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG + + + G D +G +AA + Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVG--IDPKEVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|228941631|ref|ZP_04104178.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974560|ref|ZP_04135126.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981155|ref|ZP_04141455.1| Porphobilinogen deaminase [Bacillus thuringiensis Bt407] gi|228778355|gb|EEM26622.1| Porphobilinogen deaminase [Bacillus thuringiensis Bt407] gi|228784963|gb|EEM32976.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817843|gb|EEM63921.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942243|gb|AEA18139.1| porphobilinogen deaminase [Bacillus thuringiensis serovar chinensis CT-43] Length = 309 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+ Sbjct: 179 DEVITEHLDEALCVPAVGQGALAIECREDDKDLLQLLSHINDAITERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG + + + G + +G +AA + Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|255037032|ref|YP_003087653.1| porphobilinogen deaminase [Dyadobacter fermentans DSM 18053] gi|254949788|gb|ACT94488.1| porphobilinogen deaminase [Dyadobacter fermentans DSM 18053] Length = 307 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 105/302 (34%), Positives = 158/302 (52%), Gaps = 6/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LAL A+ L I+ + TKGD+I +R+L++IG KG+FT Sbjct: 3 IKIGTRGSKLALWQAYYVEELLQR----GGVETEIVIIETKGDKILDRSLSKIGSKGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EE+E +L SG+ID AVHSAKD+ + L +I A+ RE DV +SH Sbjct: 59 EELEDQLRSGDIDIAVHSAKDLQSHLDDAFEIIAFTEREQANDVLVSHDTTLSLKSGESF 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS RR A+L + I +D RG ++TRL KL + A+LLA+AG+ R++ + I Sbjct: 119 TVGTSSTRRVAVLKHYYPHIKTVDMRGNLQTRLRKLEEGQCDALLLAFAGVHRMEYDDKI 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNP--KAQELVKVINHEDTWDSVNCERAFLAELDGS 243 E L +++F P+ GQG++ IET V K +L +++N+E T + ERAFL L G Sbjct: 179 AEHLLLDEFTPAVGQGSVAIETAVALDPAKKSKLRELLNNEHTETCLLAERAFLKRLQGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C + G A + G +++ DG + G +G A+ + Sbjct: 239 CSIPVFGMATLHEDEIRMTGGIISLDGTELIRKTETGATAFPQELGTALAEELLAAGADR 298 Query: 304 VF 305 + Sbjct: 299 IL 300 >gi|294789041|ref|ZP_06754281.1| hydroxymethylbilane synthase [Simonsiella muelleri ATCC 29453] gi|294483143|gb|EFG30830.1| hydroxymethylbilane synthase [Simonsiella muelleri ATCC 29453] Length = 311 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 101/307 (32%), Positives = 162/307 (52%), Gaps = 4/307 (1%) Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + I +R S LA+ A ++ L ++ P ++ I+ ++T+GD+I ++TL++IG Sbjct: 1 MNNPQSLVIASRESALAMWQAQHIQAQLQQLY--PQCDVSILGMTTQGDQILDKTLSKIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E L G D AVHS KD+P L +G + A R + D F+S+ L+ Sbjct: 59 GKGLFVKELEVALQDGRADLAVHSIKDVPMVLPEGFALVAISERANPFDAFVSNHYTRLE 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL +++GTSSLRR+A L +++ RG ++TRL KL+N AI+LA AG++RL Sbjct: 119 DLPKGAIVGTSSLRREAQLRARFPHLTIQPLRGNVQTRLAKLDNGDYDAIILAAAGLERL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I+ +L+ D P+ GQGA+ IE + + +NH T V ERA Sbjct: 179 ELHNRIRHVLSPADSLPAAGQGALGIEIAAHRTDLIATLLPLNHAKTAACVTAERALARA 238 Query: 240 LDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L GSC+ +A + L +G+V DG + + A +GR A+ + Sbjct: 239 LGGSCQVPLAAYCTADDAGLLTLHGLVAHPDGSVVLNANAQAPAQYADALGRAVAKKLAD 298 Query: 299 ISNKNVF 305 ++ Sbjct: 299 DGAMDII 305 >gi|229105103|ref|ZP_04235754.1| Porphobilinogen deaminase [Bacillus cereus Rock3-28] gi|228678284|gb|EEL32510.1| Porphobilinogen deaminase [Bacillus cereus Rock3-28] Length = 309 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 165/305 (54%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + +S KDLA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGESFKDLA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+ Sbjct: 179 DEVITEHLDETLCVPAVGQGALAIECREDDNDLLQLLSHMNDAVTERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A K + +V + DG + + + G + +G +AA + Sbjct: 239 GGCQVPIAGYATLTKDDAIELTALVGSMDGSVLLKETVVG--VEPKEVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|297810933|ref|XP_002873350.1| hypothetical protein ARALYDRAFT_908776 [Arabidopsis lyrata subsp. lyrata] gi|297319187|gb|EFH49609.1| hypothetical protein ARALYDRAFT_908776 [Arabidopsis lyrata subsp. lyrata] Length = 382 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 134/306 (43%), Positives = 186/306 (60%), Gaps = 6/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A+ETR L H + I I + T GD+I ++ L +IGGKGL Sbjct: 75 IRIGTRGSPLALAQAYETREKLKSKHPELVEDGAIHIEIIKTTGDKILSQPLADIGGKGL 134 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+G ID AVHS KD+PT L + + LPRED+RD FI TA SL +L Sbjct: 135 FTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFICLTAASLAELPA 194 Query: 124 HSVIGTSSLRRKALLLRWRSDISV-IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SV+GT+SLRRK+ +L + V +FRG ++TRL+KL K A LLA AG+KRL Sbjct: 195 GSVVGTASLRRKSQILHKYPALRVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSMT 254 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + IL++++ P+ QGAI I ++ K + +NHE+T +++CERAFL LDG Sbjct: 255 ENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDG 314 Query: 243 SCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFI 299 SC++ IAG+ A + F G+V + DG E SR G D + +G+DA Q + Sbjct: 315 SCRTPIAGYAAKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLSR 374 Query: 300 SNKNVF 305 + F Sbjct: 375 AGPGFF 380 >gi|229032118|ref|ZP_04188096.1| Porphobilinogen deaminase [Bacillus cereus AH1271] gi|228729208|gb|EEL80206.1| Porphobilinogen deaminase [Bacillus cereus AH1271] Length = 309 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 165/305 (54%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS + S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLQEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+ Sbjct: 179 DEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDAVTERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG + + + G ++ +G +AA + Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKETVVGT--NSEEVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|206976024|ref|ZP_03236934.1| porphobilinogen deaminase [Bacillus cereus H3081.97] gi|217961956|ref|YP_002340526.1| porphobilinogen deaminase [Bacillus cereus AH187] gi|222097910|ref|YP_002531967.1| porphobilinogen deaminase [Bacillus cereus Q1] gi|229141205|ref|ZP_04269744.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST26] gi|229198593|ref|ZP_04325295.1| Porphobilinogen deaminase [Bacillus cereus m1293] gi|226740630|sp|B7HQM4|HEM3_BACC7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800234|sp|B9IZ39|HEM3_BACCQ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|206745776|gb|EDZ57173.1| porphobilinogen deaminase [Bacillus cereus H3081.97] gi|217066883|gb|ACJ81133.1| porphobilinogen deaminase [Bacillus cereus AH187] gi|221241968|gb|ACM14678.1| porphobilinogen deaminase [Bacillus cereus Q1] gi|228584875|gb|EEK42991.1| Porphobilinogen deaminase [Bacillus cereus m1293] gi|228642246|gb|EEK98538.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST26] Length = 309 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 162/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+ Sbjct: 179 NEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHMNDGVTEKTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG + + G D +G +AA + Sbjct: 239 GGCQVPIAGYATLTENDAIELTALVGSMDGSVLLKEKVVGT--DPEKVGLEAADRLINQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|228993205|ref|ZP_04153126.1| Porphobilinogen deaminase [Bacillus pseudomycoides DSM 12442] gi|228999254|ref|ZP_04158834.1| Porphobilinogen deaminase [Bacillus mycoides Rock3-17] gi|229006801|ref|ZP_04164434.1| Porphobilinogen deaminase [Bacillus mycoides Rock1-4] gi|228754423|gb|EEM03835.1| Porphobilinogen deaminase [Bacillus mycoides Rock1-4] gi|228760451|gb|EEM09417.1| Porphobilinogen deaminase [Bacillus mycoides Rock3-17] gi|228766531|gb|EEM15173.1| Porphobilinogen deaminase [Bacillus pseudomycoides DSM 12442] Length = 309 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 162/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L+ EID AVHS KDMP L GL I R D RD FIS +S +DLA Sbjct: 59 LFVKEIEHALLMKEIDMAVHSMKDMPAVLPDGLTIGCIPKRVDPRDAFISKNGESFEDLA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + VI E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+ Sbjct: 179 DDVITEHLDETLCVPAVGQGALAIECREDDADLLQLLSHMNDAVTERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A K + +V + DG + + G + +G +AA + Sbjct: 239 GGCQVPIAGYATLQKNDEIELTALVGSMDGSVLLKEIVTG--VNPEQVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|255635113|gb|ACU17914.1| unknown [Glycine max] Length = 350 Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats. Identities = 138/306 (45%), Positives = 190/306 (62%), Gaps = 6/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A+ETR LM H I I+ + T GD+I ++ L +IGGKGL Sbjct: 43 LRIGTRGSPLALAQAYETRDKLMASHAELAEEGAIQIVIIKTTGDKILSQPLADIGGKGL 102 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+G+ID AVHS KD+PT L + LPRED+RD FIS +A SL DL Sbjct: 103 FTKEIDEALINGDIDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLSAASLADLPS 162 Query: 124 HSVIGTSSLRRKALLLRWRSDISV-IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S++GT+SLRRK+ +L ++V +FRG ++TRL KL+ A LLA AG+KRL Sbjct: 163 GSIVGTASLRRKSQILHRYPSLNVEENFRGNVQTRLRKLSEGIVQATLLALAGLKRLNMT 222 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + IL+I+D P+ QGAI I N+ K E + +NHE+T +V+CERAFL +L+G Sbjct: 223 ENVTSILSIDDMLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAVSCERAFLEKLEG 282 Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFI 299 SC++ IAG+A + F G+V + DG E SR G D I +G+DA + + Sbjct: 283 SCRTPIAGYASRNEDGNCLFRGLVASPDGIRVLETSRIGPYAFEDTIKMGKDAGEELLSR 342 Query: 300 SNKNVF 305 + F Sbjct: 343 AGPGFF 348 >gi|83815900|ref|YP_445675.1| porphobilinogen deaminase [Salinibacter ruber DSM 13855] gi|83757294|gb|ABC45407.1| porphobilinogen deaminase [Salinibacter ruber DSM 13855] Length = 323 Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats. Identities = 101/310 (32%), Positives = 164/310 (52%), Gaps = 8/310 (2%) Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M P +GTR S LAL A RS L H + + ++T+GD T+ ++EIG Sbjct: 1 MSISDPLVLGTRGSELALRQANVVRSRLEAA----GHRVELETITTRGDEATDTPISEIG 56 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT--AQS 117 + +FT+E+++ L+ G +D AVHS KD+P+ + GL ++A RED RD F++H Sbjct: 57 DEAVFTKELDRALLQGGVDLAVHSLKDIPSTVPSGLALAAIGEREDPRDAFVAHPSFDGH 116 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L DL + + T+SLRR A LL WRSD+ V+ RG ++TRL KL + ++LA AG+ Sbjct: 117 LHDLPEGATVATASLRRTAQLLTWRSDLEVVPVRGNVDTRLEKLGESDWTGMVLAVAGLV 176 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL-VKVINHEDTWDSVNCERAF 236 RL I++ ++ P+ GQGA+ I + ++L + ++H + + N ERAF Sbjct: 177 RLGLSLHIRDRIDPSLIVPAVGQGALGIACREDQDALRDLLRETLHHAPSGHAANAERAF 236 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L ++ G C+ + +A+ TL + A DG + R D +GR A + Sbjct: 237 LKKVGGGCQVPLGAWAHIDDGTLVLDACIAALDGSEHYRDERRCAPEDGAAVGRKLAADL 296 Query: 297 RFISNKNVFN 306 + ++ + Sbjct: 297 LAMGGDHILD 306 >gi|303257759|ref|ZP_07343771.1| hydroxymethylbilane synthase [Burkholderiales bacterium 1_1_47] gi|331001196|ref|ZP_08324823.1| hydroxymethylbilane synthase [Parasutterella excrementihominis YIT 11859] gi|302859729|gb|EFL82808.1| hydroxymethylbilane synthase [Burkholderiales bacterium 1_1_47] gi|329569128|gb|EGG50920.1| hydroxymethylbilane synthase [Parasutterella excrementihominis YIT 11859] Length = 310 Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats. Identities = 107/306 (34%), Positives = 164/306 (53%), Gaps = 3/306 (0%) Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M ++ I TR SPLAL A +S L + K P ++ ++ L+TKGD+I + TL++IG Sbjct: 1 MTQQDHLVIATRESPLALWQAKYVQSCLKE--KFPELDVQLLGLTTKGDKILDVTLSKIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLF +E+E ++ G+ AVHS KD+P LL+ ++A + RED RD +SH SL+ Sbjct: 59 GKGLFVKELEAAMLEGKAQIAVHSLKDVPMDLLEPFTLAAVMVREDPRDAVVSHKYASLE 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 ++ SV+GTSSLRR+ ++ + V RG + TRL+KL+N + +++A AG+KRL Sbjct: 119 EMPAGSVVGTSSLRRELMVRSRFPHLKVEMIRGNVGTRLSKLDNGQYDTLVMAVAGLKRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I+ I+ E P+PGQGAI IE N+ Q+ V+ +N EDT ERA Sbjct: 179 GLSDRIRSIIPPEVSLPAPGQGAIGIEAVGNDEMTQKYVEALNDEDTRLCTQAERAVSRA 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L GSC+ +A +A ++ +V + G + R + Sbjct: 239 LGGSCQVPLAAYATIDDGQMFLRALVGNHMTGEYVTAEYTGLANEPEENARKVLDQLIEK 298 Query: 300 SNKNVF 305 K + Sbjct: 299 GAKRLL 304 >gi|228923217|ref|ZP_04086507.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836423|gb|EEM81774.1| Porphobilinogen deaminase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 309 Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 163/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L +GL I R D RD FIS S K+LA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKNGASFKELA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+ Sbjct: 179 DEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAHINDAITERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A K + +V + DG + + + G + +G +AA + Sbjct: 239 GGCQVPIAGYATLTKNDAIELTALVGSMDGSVLLKETVVGT--NPEEVGLEAADRLIKRG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|218290821|ref|ZP_03494890.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius LAA1] gi|218239179|gb|EED06380.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius LAA1] Length = 305 Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats. Identities = 112/304 (36%), Positives = 158/304 (51%), Gaps = 4/304 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+ TR S LAL L V ++P+ T+GD I +R L+E+GGKG Sbjct: 1 MRILRVATRRSALALTQTNHVVDLLKRVIH--DLKFELVPIRTRGDEIVDRALSEVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +IE L +G D AVHS KD+P +L GL I A RED RD IS T Q L DL Sbjct: 59 LFVADIEDALATGRADLAVHSLKDVPFELRDGLTIGAVPRREDPRDALISRTGQGLFDLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSSLRR+A L R R D+ V RG ++TR+ +L + AI+LA +G+ RL Sbjct: 119 PGARVGTSSLRRQAALRRLRPDLRVDTLRGNVDTRIRRLEEGQFDAIVLAASGLHRLGLA 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I E L ++ F P+ GQGA+ IE + + + I D +V ERAFL+ L+G Sbjct: 179 EKITEYLPVDRFVPAVGQGALAIECRAEDDEVLRYLGAIADPDATRAVEAERAFLSRLEG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC+ I +A G L V G + ++ R G+ DA +G A+ + + Sbjct: 239 SCQVPIGAYAEPVGHELRLIAFVADPSGARYLQLERTGS--DARALGVAVAEEMLRQGAE 296 Query: 303 NVFN 306 Sbjct: 297 TWLE 300 >gi|387507|gb|AAA39891.1| porphobilinogen deaminase (erythroid sp.) [Mus musculus] Length = 344 Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats. Identities = 105/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LA + L ++ P II +ST GD+I + L++IG K Sbjct: 1 MRVIRVGTRKSQLARIQTETVVAMLKALY--PGIQFEIIAMSTTGDKIVDTALSKIGEKS 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 LFT+E+E L E+D VHS KD+PT L G I A R++ D + H ++L+ Sbjct: 59 LFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRQNPCDAVVFHPKFIGKTLE 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKR 178 L S +GTSSLRR A L R ++ RG + TRL KL+ + AI+LA AG++R Sbjct: 119 TLPEKSAVGTSSLRRVAQLQRKFPNLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 179 MGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 239 HLEGGCSVPVAVHTVIKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQL 298 Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 299 VGITARNIPRGAQLAAENLGISLASLLLNKGAKNILD 335 >gi|229098938|ref|ZP_04229873.1| Porphobilinogen deaminase [Bacillus cereus Rock3-29] gi|228684436|gb|EEL38379.1| Porphobilinogen deaminase [Bacillus cereus Rock3-29] Length = 309 Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L+ EID AVHS KDMP L +GL I R D RD FIS + +S KDLA Sbjct: 59 LFVKEIEHALLMKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGESFKDLA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWD 178 Query: 183 KV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E L+ P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+ Sbjct: 179 DEVITEHLDETLCVPAVGQGALAIECRKDDNDLLQLLSHMNDAVTERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A K + +V + DG + + + G + +G +AA + Sbjct: 239 GGCQVPIAGYATLTKDDAIELTALVGSMDGSVLLKETVVG--VEPKEVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|323189475|gb|EFZ74755.1| porphobilinogen deaminase [Escherichia coli RN587/1] Length = 286 Score = 238 bits (607), Expect = 8e-61, Method: Composition-based stats. Identities = 100/272 (36%), Positives = 150/272 (55%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 5 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 64 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+T SL L S++GTSSLRR+ L R D+ + RG Sbjct: 65 GLGLVTICEREDPRDAFVSNTYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 125 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTR 184 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 185 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 244 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 R G DA +G A+ + + + Sbjct: 245 IRGERRGAPQDAEQMGISLAEELLNNGAREIL 276 >gi|325291200|ref|YP_004267381.1| hydroxymethylbilane synthase [Syntrophobotulus glycolicus DSM 8271] gi|324966601|gb|ADY57380.1| hydroxymethylbilane synthase [Syntrophobotulus glycolicus DSM 8271] Length = 305 Score = 238 bits (607), Expect = 8e-61, Method: Composition-based stats. Identities = 121/304 (39%), Positives = 175/304 (57%), Gaps = 5/304 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RIGTR S LA+ A + SL ++ P + V++P TKGD+I + L +IG KG Sbjct: 1 MKTIRIGTRESKLAIWQAEWVKDSLTSIY--PGIDCVLVPKKTKGDKIPDIPLPKIGDKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 FTEE+E+ L++GEID AVHS KD+P +L +GL I+AY R D RDVF L +L Sbjct: 59 FFTEELEQALLTGEIDLAVHSLKDLPVELPQGLSIAAYGERHDPRDVFFGKEGLPLAELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA-ILLAYAGIKRLKK 181 S+IGTSSLRR+ L R+D++ D RG ++TR +KL N++ A I+LA AG RL Sbjct: 119 AGSMIGTSSLRRQCQLKYQRADLNFCDLRGNLDTRWDKLQNSRDMAGIVLAAAGALRLGW 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I E L + P+ GQG I IET + + +++++ +NH + + ER+FL L Sbjct: 179 QDRITEFLAEDVVLPAVGQGIIAIETASHRTEIRQILQPLNHRPSELAGRAERSFLRSLG 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C++ IA A + + G+V DGK +V+ G D G DAA I+ + Sbjct: 239 GGCQTPIAALAKVQEDRIQVTGMVAGMDGKNILKVTAEGF--DPEQTGADAAAQIKCLGA 296 Query: 302 KNVF 305 N+ Sbjct: 297 NNLL 300 >gi|295706769|ref|YP_003599844.1| porphobilinogen deaminase [Bacillus megaterium DSM 319] gi|294804428|gb|ADF41494.1| porphobilinogen deaminase [Bacillus megaterium DSM 319] Length = 310 Score = 238 bits (607), Expect = 8e-61, Method: Composition-based stats. Identities = 118/306 (38%), Positives = 166/306 (54%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L P I + TKGD+I N TL+++GGKG Sbjct: 1 MRKIIVGSRRSKLALTQTKWVIEQLKKQGL--PFEFEIKEMVTKGDQILNVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ ++ EID AVHS KDMP L +GL I RED RD IS + ++L Sbjct: 59 LFVKEIEQAMLDEEIDMAVHSMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR A LL RSDI + RG I+TRL KL N AI+LA AG+ R+ Sbjct: 119 SGAVIGTSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNKDYDAIILAAAGLSRMGWS 178 Query: 183 KVI-KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + L E P+ GQGA+ IE N+ + L++ +NH++T +V ER FL E++ Sbjct: 179 RDTVTQYLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEME 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+ G + +V + DGK ++ G D + IG AA+ + Sbjct: 239 GGCQVPIAGYGRILDGGNIELTSLVASPDGKTIYKEQITGK--DPVAIGSAAAERLTSQG 296 Query: 301 NKNVFN 306 K + + Sbjct: 297 AKLLID 302 >gi|332089030|gb|EGI94141.1| porphobilinogen deaminase [Shigella boydii 3594-74] Length = 287 Score = 238 bits (607), Expect = 8e-61, Method: Composition-based stats. Identities = 99/272 (36%), Positives = 149/272 (54%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 185 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 R G DA +G A+ + + + Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNGAREIL 277 >gi|13277999|gb|AAH03861.1| Hydroxymethylbilane synthase [Mus musculus] Length = 361 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 159/338 (47%), Gaps = 35/338 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA + L ++ P II +ST GD+I + L++IG K Sbjct: 17 KMRVIRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 75 SLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177 + L S +GTSSLRR A L R ++ RG + TRL KL+ + AI+LA AG++ Sbjct: 135 ETLPEKSAVGTSSLRRVAQLQRKFPNLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQ 194 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 195 RMGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFL 254 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 255 RHLEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQ 314 Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 315 LVGITARNIPRGAQLAAENLGISLASLLLNKGAKNILD 352 >gi|237752686|ref|ZP_04583166.1| porphobilinogen deaminase [Helicobacter winghamensis ATCC BAA-430] gi|229376175|gb|EEO26266.1| porphobilinogen deaminase [Helicobacter winghamensis ATCC BAA-430] Length = 310 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 103/312 (33%), Positives = 164/312 (52%), Gaps = 11/312 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + IGTR S LAL A ++ L + + P + + + TKGD+I + L +IGGKG Sbjct: 1 MQKLTIGTRGSVLALWQANHIKNLLEERY--PKLEVELKIVKTKGDKILDVPLAKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E L+ G+ID AVHS KD+P + +GL ++A RED+RD F+S ++L DL Sbjct: 59 LFTKELEVLLLEGDIDLAVHSLKDVPVEFTQGLGLAAITKREDVRDSFLSFKYKNLGDLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GT+SLRR + R D+ RG ++TRL +L N + AI+LA AG+ RL+ + Sbjct: 119 KGAKVGTTSLRRVMQINALRGDLDCQSLRGNVQTRLQRLENEEFDAIILAQAGVNRLELK 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I ++ P+ GQ A+ IE + EL+ +N ++ +CERAF+ L+G Sbjct: 179 GIPY-ITPLDFMVPAMGQAALGIECK-KDSNYVELLSFLNDKNAVFETHCERAFVRVLNG 236 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDAAQYIRFI 299 C+ I A +L I+ DG + S + D IG+ A+ Sbjct: 237 GCQVPIGINARYNEGSLEVRAILGLPDGSEIIKENLESEVSSIKDCEYIGKTLAESFLNQ 296 Query: 300 SNKNVF----NF 307 + + ++ Sbjct: 297 GAREILQKAQDW 308 >gi|74181545|dbj|BAE30038.1| unnamed protein product [Mus musculus] Length = 360 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 158/337 (46%), Gaps = 34/337 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA + L ++ P II +ST GD+I + L++IG K Sbjct: 17 KMRVIRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 75 SLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177 + L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++ Sbjct: 135 ETLPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQ 194 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 195 RMGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFL 254 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR----------NGNRCD--- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 255 RHLEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQEDGPEDDPQL 314 Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 315 VGITARNIPRGAQLAAENLGISLASLLLNKGAKNILD 351 >gi|254463278|ref|ZP_05076694.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2083] gi|206679867|gb|EDZ44354.1| porphobilinogen deaminase [Rhodobacteraceae bacterium HTCC2083] Length = 295 Score = 238 bits (606), Expect = 9e-61, Method: Composition-based stats. Identities = 128/293 (43%), Positives = 173/293 (59%) Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74 +ALA A+ETR L +P VI + T GD+I +R L EIGGKGLFT EIE ++S Sbjct: 1 MALAQAYETRRRLSGAFDLPEEAFVIKVIKTTGDKILDRPLKEIGGKGLFTREIEDDMLS 60 Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRR 134 G ID AVHS KDMP +GL + YLPRED+RD F+S + L DL +V+GTSSLRR Sbjct: 61 GAIDIAVHSMKDMPVLQPEGLVLDTYLPREDVRDAFVSSGHERLADLPSGAVVGTSSLRR 120 Query: 135 KALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDF 194 +A LL +R D++V++FRG ++TRL KL + A LA AG++RL V K + E+ Sbjct: 121 RAQLLNYRPDLNVVEFRGNVQTRLKKLEDKVADCTFLAMAGLRRLDMAHVAKSAIETEEM 180 Query: 195 PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254 P+ QGAI IE +N+ A E++ I+ T + ERAFLA LDGSC++ IAG A Sbjct: 181 LPAVAQGAIGIERRINDTNAAEMLAAIHDTQTGQRLAAERAFLAALDGSCETPIAGLAEL 240 Query: 255 KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFNF 307 GS + F G VL DG +G D + +G A + + + F + Sbjct: 241 DGSNMRFRGQVLRPDGSESIGDDVSGTIEDGVAMGEAMAAKLLAEAGEGFFEW 293 >gi|329119508|ref|ZP_08248193.1| hydroxymethylbilane synthase [Neisseria bacilliformis ATCC BAA-1200] gi|327464441|gb|EGF10741.1| hydroxymethylbilane synthase [Neisseria bacilliformis ATCC BAA-1200] Length = 317 Score = 238 bits (606), Expect = 9e-61, Method: Composition-based stats. Identities = 105/302 (34%), Positives = 165/302 (54%), Gaps = 2/302 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A ++ L ++ P +I I+ L+T+GD+I +RTL++IGGKGLF Sbjct: 6 KLTIASRQSALAMWQAEHIKARLHALY--PACDIRILGLTTRGDQILDRTLSKIGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E+ L G D AVHS KD+P +L +G ++A R D F+S+ +L L Sbjct: 64 IKELEQALHDGRADLAVHSIKDVPMELPEGFLLAAIGERASPFDAFVSNRHNTLAALPAG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A + ++V RG ++TRL KL+N + AI+LA AG++RL Sbjct: 124 AVVGTSSLRREAQIRARHPHLTVKPLRGNVQTRLAKLDNGEYDAIILAAAGLQRLGLNGR 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+EIL+ ++ P+ GQGA+ IE + L+ +NH +T V ER L GSC Sbjct: 184 IREILSPDECLPAAGQGALGIEIAEHRSDLLPLLAPLNHAETAACVTAERTLAQALGGSC 243 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A + L G+V DG + E + A +GR A+ + + + Sbjct: 244 QIPLAAYCTSDEGLLTLRGLVGHPDGSVLIEAAAQAPAAYARTLGRAVAKRLADQDAEAL 303 Query: 305 FN 306 + Sbjct: 304 ID 305 >gi|320101752|ref|YP_004177343.1| hydroxymethylbilane synthase [Isosphaera pallida ATCC 43644] gi|319749034|gb|ADV60794.1| hydroxymethylbilane synthase [Isosphaera pallida ATCC 43644] Length = 332 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 157/305 (51%), Gaps = 3/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RIGTR SPLA A + L D P + ++ + T GDR N L IGG Sbjct: 15 SHRRVRIGTRGSPLARWQAEWVAARLRDA--WPGLTVELVEIKTLGDRDRNSPLASIGGA 72 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT+EI++ L+ ++ AVHS KD+PT+ ++GL + A PRE+ RD I+ L+ L Sbjct: 73 GLFTKEIQRALLDCRVEIAVHSLKDLPTQPVEGLILGAVPPREEPRDALIAPAHGLLEHL 132 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GT SLRR+A LL R D+ V+ RG +ETRLN + A+LLA AG++RL Sbjct: 133 PAAARVGTGSLRRRAQLLWMRPDLEVVGVRGNVETRLNHALEGRLDAVLLAVAGLRRLGL 192 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I + L DF P+ GQGA+ IE ++P L+ ++ + SV ERA LA+L+ Sbjct: 193 DSAITQTLGPPDFLPAVGQGALGIECRGDDPDTLALLAPLDDPASRASVLAERALLADLE 252 Query: 242 GSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C + + + L VL G+ +G D +G A +R Sbjct: 253 AGCMVPLGAWGRSEADGLLALDAAVLDPAGRQRLAAHASGPANDPQTLGLAVAAELRRQG 312 Query: 301 NKNVF 305 + + Sbjct: 313 AEALL 317 >gi|110598700|ref|ZP_01386964.1| porphobilinogen deaminase [Chlorobium ferrooxidans DSM 13031] gi|110339694|gb|EAT58205.1| porphobilinogen deaminase [Chlorobium ferrooxidans DSM 13031] Length = 313 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 116/308 (37%), Positives = 166/308 (53%), Gaps = 6/308 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK IGTR SPLAL A T++ L P +I + + T GD + + L++IG Sbjct: 1 MKKQLIIGTRSSPLALWQAEFTKTELSR--HFPELDIKLKLVKTTGDVLLDSPLSKIGDM 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT++IEK LI+ EID AVHS KD+PT +GL I+++ RED RDV IS LK+L Sbjct: 59 GLFTKDIEKHLIAKEIDLAVHSLKDVPTGTPEGLIITSFTEREDTRDVIISKGGVKLKEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++ + TSSLRR + LL R D+ + D RG + TR K + + A++LAYAG+ RL Sbjct: 119 PANAKMATSSLRRMSQLLSLRPDLDIRDIRGNLNTRFQKFDAGEFDAMMLAYAGVYRLNF 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I EIL E P+ GQGA+ IET V++ + +E+V+++NH +T ERA L L Sbjct: 179 SDRISEILPHEVMLPAVGQGALGIETRVDDEQTREIVRILNHSNTEYCCRAERALLRHLQ 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIR 297 G C+ I + + TL V + DGK+ + A G A+ + Sbjct: 239 GGCQIPIGAYGSFQNGTLKLLAYVGSVDGKVGLHDEITKTGLTSPEQAEEAGIALAEKLL 298 Query: 298 FISNKNVF 305 + Sbjct: 299 AQGADAIL 306 >gi|328949818|ref|YP_004367153.1| Porphobilinogen deaminase [Marinithermus hydrothermalis DSM 14884] gi|328450142|gb|AEB11043.1| Porphobilinogen deaminase [Marinithermus hydrothermalis DSM 14884] Length = 305 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 105/306 (34%), Positives = 159/306 (51%), Gaps = 9/306 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +GTR S LAL L + + P I + T+GDR + Sbjct: 1 MRVIVVGTRGSALALTQTRWVVERLKE--QWPEAEFKIKTIQTRGDRG-----APPTDRD 53 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDL 121 +F +E+E+ L+ GEID AVHS KD+PT+ +GL I++ R D RDVFI + + L+DL Sbjct: 54 IFVKELEEALLRGEIDIAVHSLKDLPTEQPEGLVIASIPKRVDPRDVFIGRNGIRRLEDL 113 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSS+RRKA LL +R D+ V + RG ++TRL+ L + + I+LA AG+ RL Sbjct: 114 PEGAVVGTSSVRRKAQLLAYRPDLVVRELRGNVDTRLSALGSGEFDGIILAAAGLLRLDL 173 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I ++ + P+PGQGA+ +E + A EL I+H T D ER+FL L Sbjct: 174 RNRIDAFIDPKIMLPAPGQGALALEVREGDDIADELAYSIHHHPTDDRTTAERSFLHHLG 233 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C + + A+ + TL G+V+A DG G+ +A +G + A+ I Sbjct: 234 AGCLAPVGALAHVEEDGTLRLEGVVVAPDGSSMIHGEIEGDAEEAWELGAELARDILEQG 293 Query: 301 NKNVFN 306 K + Sbjct: 294 GKRILE 299 >gi|109108912|ref|XP_001101850.1| PREDICTED: porphobilinogen deaminase isoform 7 [Macaca mulatta] Length = 361 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 108/338 (31%), Positives = 160/338 (47%), Gaps = 35/338 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177 + L SV+GTSSLRR A L R S + RG + TRL KL+ + AI+LA AG++ Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFSHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQ 194 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 195 RMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 254 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 255 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQDTMQATIHVPAQHEDGPEDDPQ 314 Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 315 LVGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 352 >gi|71064670|ref|YP_263397.1| hydroxymethylbilane synthase [Psychrobacter arcticus 273-4] gi|71037655|gb|AAZ17963.1| hydroxymethylbilane synthase [Psychrobacter arcticus 273-4] Length = 345 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 104/330 (31%), Positives = 169/330 (51%), Gaps = 31/330 (9%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR SPLAL A R L+ ++ P I ++ + TKGD+I + L +IGGKGLF Sbjct: 11 TLNIATRQSPLALWQAEHIRDRLLVLY--PEMTINLLKIVTKGDKILDTPLAKIGGKGLF 68 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E+ L + D AVHS KD+P L +GL + Y R D F+S+T S+ +L Sbjct: 69 VKELEQALYDKQADIAVHSLKDVPMDLPEGLTLGVYCKRASPTDAFVSNTYHSIDELPQG 128 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GT+SLRR+ + +R+D+ + RG + TRL+KL+ + AI+LA +G++RL+ Sbjct: 129 AVVGTASLRRQCQIKAYRADLQIKTLRGNVGTRLSKLDAGEYDAIILATSGLQRLELNAR 188 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ L+I+ P+ GQGA+ IE ++ + +L+ +N + + ERA L G C Sbjct: 189 IRSELDIDICLPAVGQGALAIECRADDDEVLKLLAPLNDDKARIRLIAERALNRHLQGGC 248 Query: 245 KSAIAGFAYCK---------------------GSTLYFYGIVLASDGKIFHEVSR----N 279 + IA +A + G TL+ G V DG +V + Sbjct: 249 QVPIAAYAVLQKADALAADNDDNGSVSNNNDAGDTLWLRGRVGQEDGSELLKVEKRQTLT 308 Query: 280 GNRCD----AINIGRDAAQYIRFISNKNVF 305 G++ + A +G + A+ + + Sbjct: 309 GSQAEQEAQANQLGIEVAEMLLEAGAGAIL 338 >gi|161617053|ref|YP_001591018.1| hypothetical protein SPAB_04886 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161366417|gb|ABX70185.1| hypothetical protein SPAB_04886 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 286 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 98/272 (36%), Positives = 145/272 (53%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P Sbjct: 5 PGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVHSMKDVPVAFPD 64 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL DL S++GTSSLRR+ L R D+ + RG Sbjct: 65 GLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL KL+N AI+LA AG+KRL E I+ L + P+ GQGA+ IE +++ + Sbjct: 125 VGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTALPPDVSLPAVGQGAVGIECRLDDAR 184 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 Q L+ +NH T V ERA L+G C+ I +A ++ +V A DG + Sbjct: 185 TQALLAPLNHSQTALRVTAERAMNTRLEGGCQVPIGSYAEIINGEIWLRALVGAPDGSVM 244 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 R G+ A +G A+ + + + Sbjct: 245 VRGERRGSPEQAEQMGISLAEELLENGARAIL 276 >gi|297568516|ref|YP_003689860.1| porphobilinogen deaminase [Desulfurivibrio alkaliphilus AHT2] gi|296924431|gb|ADH85241.1| porphobilinogen deaminase [Desulfurivibrio alkaliphilus AHT2] Length = 311 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 106/303 (34%), Positives = 170/303 (56%), Gaps = 2/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LALA + + + + P ++ ++ + TKGD+I + L ++GGKGL Sbjct: 3 KTIRIGTRASMLALAQSNWIKGRIEAQY--PGCSVELVKIVTKGDKIVDVPLAKVGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+ E+D AVHS KD+P +L +GL I RE D FI++ ++L ++ Sbjct: 61 FVKEIEEALLRREVDIAVHSMKDVPAELPEGLHIGIITEREKPFDAFITNNYKTLAEVPQ 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSSLRRKA L R R D+ + D RG ++TRL KL+ AI+LA AG+ RL Sbjct: 121 GATIGTSSLRRKAQLARLRPDLKIEDLRGNLDTRLRKLDEGVYDAIILAAAGLNRLDLFH 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ P+ QGA+ IE + +++ ++H +T +V+ ER++L L+G Sbjct: 181 RATFCFQPDEMLPAVAQGAVGIELRRADEDLLQMLSFMDHRETTLAVHAERSYLKRLEGG 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ +AGFA G TL G++ + DG + +G A +G + A+ + + + Sbjct: 241 CQVPLAGFATLAGQTLTINGLIASVDGGKMVKAKHSGPAAQAKTLGLELAEELLAMGGRE 300 Query: 304 VFN 306 + Sbjct: 301 ILE 303 >gi|229062158|ref|ZP_04199482.1| Porphobilinogen deaminase [Bacillus cereus AH603] gi|228717141|gb|EEL68817.1| Porphobilinogen deaminase [Bacillus cereus AH603] Length = 309 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 165/305 (54%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDITLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S KDLA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPDGLTIGCTPKRVDPRDAFISKNGESFKDLA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWD 178 Query: 183 -KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+ Sbjct: 179 GEVITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG + + G D +G +AA + Sbjct: 239 GGCQVPIAGYATLKENDEIELTALVGSMDGSVLLKEIVVG--NDPKQVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|154251802|ref|YP_001412626.1| porphobilinogen deaminase [Parvibaculum lavamentivorans DS-1] gi|154155752|gb|ABS62969.1| porphobilinogen deaminase [Parvibaculum lavamentivorans DS-1] Length = 308 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 131/307 (42%), Positives = 183/307 (59%), Gaps = 2/307 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNI-VIIPLSTKGDRITNRTLTEIG 59 M+++ +RIGTR S LAL A E + P + I+ +ST GDR+ +R L+EIG Sbjct: 1 MQRR-YRIGTRGSRLALIQANEVARRIALALHAPVEEVTEIVVISTAGDRVQDRALSEIG 59 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLFTEEIE++L ID AVHS KDMPT L +GL I L R D RD F+S A SL Sbjct: 60 GKGLFTEEIEEQLADARIDVAVHSMKDMPTLLPEGLVIDCLLERADPRDAFLSSKANSLM 119 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L +V+GTSSLRR A + R D++V+ FRG ++TRL KL + A A LLA AG+ R+ Sbjct: 120 SLPQGAVVGTSSLRRAAQVRARRPDVTVVPFRGNVDTRLKKLADGVADATLLAMAGLTRM 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + L+ E+ P+ QGAI IE + +A L++ ++H +T V ERAFLA Sbjct: 180 DLLECVTAPLSPEELLPAVAQGAIGIERRAADDEAAHLLEKLHHTETGLRVAAERAFLAV 239 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 LDGSC++ IA A G + ++L DG HE R G DA+ +G+DA + ++ Sbjct: 240 LDGSCRTPIAALAEISGDHMRLRTMILTPDGAEIHETEREGLAADAVLLGQDAGEELKGR 299 Query: 300 SNKNVFN 306 + + F+ Sbjct: 300 AGPHFFD 306 >gi|159110431|ref|NP_038579.2| porphobilinogen deaminase isoform 1 [Mus musculus] gi|74177773|dbj|BAE38979.1| unnamed protein product [Mus musculus] gi|74198532|dbj|BAE39746.1| unnamed protein product [Mus musculus] Length = 361 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 158/338 (46%), Gaps = 35/338 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA + L ++ P II +ST GD+I + L++IG K Sbjct: 17 KMRVIRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 75 SLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177 + L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++ Sbjct: 135 ETLPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQ 194 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 195 RMGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFL 254 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 255 RHLEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQ 314 Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 315 LVGITARNIPRGAQLAAENLGISLASLLLNKGAKNILD 352 >gi|208435725|pdb|3ECR|A Chain A, Structure Of Human Porphobilinogen Deaminase gi|208435726|pdb|3ECR|B Chain B, Structure Of Human Porphobilinogen Deaminase Length = 364 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 107/338 (31%), Positives = 158/338 (46%), Gaps = 35/338 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA ++L + P II +ST GD+I + L++IG K Sbjct: 20 KMRVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEK 77 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 78 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTL 137 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177 + L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++ Sbjct: 138 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQ 197 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 198 RMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 257 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 258 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQ 317 Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 318 LVGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 355 >gi|323173419|gb|EFZ59048.1| porphobilinogen deaminase [Escherichia coli LT-68] Length = 286 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 98/272 (36%), Positives = 149/272 (54%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 5 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 64 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 65 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 125 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTR 184 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 185 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 244 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 R G +A +G A+ + + + Sbjct: 245 IRGERRGAPQNAEQMGISLAEELLNNGAREIL 276 >gi|20149500|ref|NP_000181.2| porphobilinogen deaminase isoform 1 [Homo sapiens] gi|1170217|sp|P08397|HEM3_HUMAN RecName: Full=Porphobilinogen deaminase; Short=PBG-D; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|12653497|gb|AAH00520.1| Hydroxymethylbilane synthase [Homo sapiens] gi|14198180|gb|AAH08149.1| Hydroxymethylbilane synthase [Homo sapiens] gi|17939638|gb|AAH19323.1| Hydroxymethylbilane synthase [Homo sapiens] gi|119587851|gb|EAW67447.1| hydroxymethylbilane synthase, isoform CRA_a [Homo sapiens] gi|158261573|dbj|BAF82964.1| unnamed protein product [Homo sapiens] gi|312152370|gb|ADQ32697.1| hydroxymethylbilane synthase [synthetic construct] Length = 361 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 107/338 (31%), Positives = 158/338 (46%), Gaps = 35/338 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA ++L + P II +ST GD+I + L++IG K Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177 + L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++ Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQ 194 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 195 RMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 254 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 255 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQ 314 Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 315 LVGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 352 >gi|29655352|ref|NP_821044.1| porphobilinogen deaminase [Coxiella burnetii RSA 493] gi|212213517|ref|YP_002304453.1| porphobilinogen deaminase [Coxiella burnetii CbuG_Q212] gi|39931503|sp|Q83A37|HEM3_COXBU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226706284|sp|B6J3T6|HEM3_COXB2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|29542624|gb|AAO91558.1| porphobilinogen deaminase [Coxiella burnetii RSA 493] gi|212011927|gb|ACJ19308.1| porphobilinogen deaminase [Coxiella burnetii CbuG_Q212] Length = 307 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 159/304 (52%), Gaps = 4/304 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K+ I TR SPLAL A + + + H P I+ +T+GDR+T L + GGK Sbjct: 3 KKRSILIVTRKSPLALWQAEFVKQQIENSH--PHLACQILGCTTQGDRLTTEKLVDSGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 LF ++++K L++ + D AVHS KDM L + A++ RED RDV I S Sbjct: 61 DLFVKDLQKALLNRDADIAVHSIKDMSACDGPELMVGAFIRREDPRDVLIVKGELSTL-- 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 H+VIGTSS RR+ L +++ + + RG + TRL KL+ AI+LA AG+KRL Sbjct: 119 PPHAVIGTSSPRRQCQLKKFQPGCKIKEIRGNVGTRLAKLDAGHYEAIVLAAAGLKRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I + +F P+ GQGAI +E ++ + Q L+K ++H +T V ERA +L Sbjct: 179 ENRIHYYFDPHEFIPAIGQGAIGVECRSDDHEMQTLLKSLDHRETRLCVTAERAVNEKLG 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C + IA A K L + ++ DG++ + GN +A IG A + Sbjct: 239 GDCFTPIAAHAIIKNDQLSLFAMLGKIDGRVIIRATEIGNSEEAKRIGFKVASQLLEQGG 298 Query: 302 KNVF 305 ++ Sbjct: 299 DSLL 302 >gi|94984201|ref|YP_603565.1| porphobilinogen deaminase [Deinococcus geothermalis DSM 11300] gi|123257361|sp|Q1J288|HEM3_DEIGD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|94554482|gb|ABF44396.1| porphobilinogen deaminase [Deinococcus geothermalis DSM 11300] Length = 309 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 108/307 (35%), Positives = 164/307 (53%), Gaps = 5/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITN--RTLTEIGG 60 + +GTR S LALA + L + + P + I +STKGDR ++L + G Sbjct: 1 MRTVTVGTRGSALALAQTRWVVARLKE--EWPDTDFRIQTISTKGDRDRAALQSLAQKGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLK 119 KG + +EIE L++G ID AVHS KD+PT+ +GL+I++ R D RDV I + L+ Sbjct: 59 KGFWVKEIEDALLAGRIDIAVHSLKDLPTEQPEGLEIASIPKRVDARDVLIGKDGMKRLE 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL + +GTSS+RRKA L +R D+ ++D RG I+TRL L AI+LA AG+ R Sbjct: 119 DLPSGARVGTSSVRRKAFLRAYRPDLQILDLRGNIDTRLAALGTPDYDAIVLAAAGLIRT 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I E ++ + P+PGQGA+ +ET ++ + E+V I+ T D V ER FLA Sbjct: 179 EMRHRIDEFIDPDLLLPAPGQGALALETRADDDLSIEVVYAIHDHATDDRVTAEREFLAG 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L C + + A K L G V A DG + +G+ + ++G + A + Sbjct: 239 LGAGCMAPVGAHATLKDGVLTLEGWVGALDGSQVIRATTSGDPAECADLGAELAADMLGQ 298 Query: 300 SNKNVFN 306 + + Sbjct: 299 GAQQLIE 305 >gi|291298238|ref|YP_003509516.1| porphobilinogen deaminase [Stackebrandtia nassauensis DSM 44728] gi|290567458|gb|ADD40423.1| porphobilinogen deaminase [Stackebrandtia nassauensis DSM 44728] Length = 307 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 106/309 (34%), Positives = 162/309 (52%), Gaps = 9/309 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR SP+ALA A ++L + P + I+P +T GD+ L+++GG Sbjct: 1 MSVK-VRIGTRSSPMALAQADRVSAALTAL--DPDVAVEIVPFTTSGDKWMG-PLSQLGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMP--TKLLKGLQISAYLPREDIRDVFISHTAQSL 118 KG FT+E++ L+ G D VH KD+P L +G I+A+L R+D+RD + SL Sbjct: 57 KGAFTKEVDAALVEGTCDLCVHCVKDIPGDRDLPEGTVIAAHLERDDVRDALVHPGGLSL 116 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 DL S IGTSS RR A L +S + RG TRL KL+ A+LLA +G++R Sbjct: 117 SDLPDGSRIGTSSPRRAAQLALHWPRLSPLPIRGNANTRLAKLDAGDFDALLLAVSGLER 176 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L I EIL+++ P+ G G + ++ ++ ++LV ++ T ER+ L Sbjct: 177 LALTDRITEILDVDTMVPAIGSGTLALQCRTDDTPVRDLVARLDDPMTSWRTEAERSMLR 236 Query: 239 ELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L+G C S IAG+A + L +G V++ DG E +G DA +G A+ + Sbjct: 237 ALNGHCHSPIAGYAIQESEGVLSLHGRVMSLDGSTVLEARESG--ADATALGTSVAEALL 294 Query: 298 FISNKNVFN 306 + + + Sbjct: 295 RQGARELID 303 >gi|34101365|gb|AAQ57734.1| porphobilinogen deaminase [Chromobacterium violaceum ATCC 12472] Length = 295 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 160/289 (55%), Gaps = 2/289 (0%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + A ++ L ++ P + I+ ++T+GD+I ++TL++IGGKGLF +E+E+ L+ G Sbjct: 1 MWQAEHIQARLQALY--PHLTVEILGMTTQGDQILDKTLSKIGGKGLFVKELEQALMDGR 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 D AVHS KD+P L G ++A RED RD F+S+ Q L +L SV+GTSSLRR+A Sbjct: 59 ADLAVHSLKDVPMTLPDGFALAAVCEREDPRDAFVSNRYQHLSELPAGSVVGTSSLRREA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 L ++V RG ++TRL KL++ + AI+LA AG+KRL + I+ L + P Sbjct: 119 QLRARFPQLAVKPLRGNVQTRLKKLDDGEFDAIILAAAGLKRLGLAERIQGELAPSESLP 178 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + GQGA+ IE + L+ +NH DT ERA EL GSC+ + FA Sbjct: 179 AAGQGALGIEIRADRADLSALLAPLNHPDTRACTAAERALAKELGGSCQVPLGAFATLAD 238 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 TL G+V DG + S +G A +GR A+ + + + Sbjct: 239 GTLTLGGLVAHPDGSVVLTASASGPADYADALGRAVAKKLIDAGARPLI 287 >gi|109108922|ref|XP_001101575.1| PREDICTED: porphobilinogen deaminase isoform 4 [Macaca mulatta] gi|109108924|ref|XP_001101668.1| PREDICTED: porphobilinogen deaminase isoform 5 [Macaca mulatta] Length = 344 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 108/337 (32%), Positives = 159/337 (47%), Gaps = 35/337 (10%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K Sbjct: 1 MRVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKS 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 59 LFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLE 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKR 178 L SV+GTSSLRR A L R S + RG + TRL KL+ + AI+LA AG++R Sbjct: 119 TLPEKSVVGTSSLRRAAQLQRKFSHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 179 MGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 239 HLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQDTMQATIHVPAQHEDGPEDDPQL 298 Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 299 VGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 335 >gi|159110463|ref|NP_001103721.1| porphobilinogen deaminase isoform 2 [Mus musculus] gi|74138074|dbj|BAE25434.1| unnamed protein product [Mus musculus] Length = 344 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LA + L ++ P II +ST GD+I + L++IG K Sbjct: 1 MRVIRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEKS 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 59 LFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLE 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKR 178 L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R Sbjct: 119 TLPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 179 MGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 239 HLEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQL 298 Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 299 VGITARNIPRGAQLAAENLGISLASLLLNKGAKNILD 335 >gi|153206963|ref|ZP_01945781.1| porphobilinogen deaminase [Coxiella burnetii 'MSU Goat Q177'] gi|154707682|ref|YP_001425472.1| porphobilinogen deaminase [Coxiella burnetii Dugway 5J108-111] gi|165918283|ref|ZP_02218369.1| porphobilinogen deaminase [Coxiella burnetii RSA 334] gi|212219568|ref|YP_002306355.1| porphobilinogen deaminase [Coxiella burnetii CbuK_Q154] gi|189028088|sp|A9KDC4|HEM3_COXBN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226706283|sp|B6J6K0|HEM3_COXB1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|120577036|gb|EAX33660.1| porphobilinogen deaminase [Coxiella burnetii 'MSU Goat Q177'] gi|154356968|gb|ABS78430.1| porphobilinogen deaminase [Coxiella burnetii Dugway 5J108-111] gi|165918143|gb|EDR36747.1| porphobilinogen deaminase [Coxiella burnetii RSA 334] gi|212013830|gb|ACJ21210.1| porphobilinogen deaminase [Coxiella burnetii CbuK_Q154] Length = 307 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 159/304 (52%), Gaps = 4/304 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K+ I TR SPLAL A + + + H P I+ +T+GDR+T L + GGK Sbjct: 3 KKRSILIVTRKSPLALWQAEFVKQQIENSH--PHLACQILGCTTQGDRLTTEKLVDSGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 LF ++++K L++ + D AVHS KDM L + A++ RED RDV I S Sbjct: 61 DLFVKDLQKALLNRDADIAVHSIKDMSACDGPELMVGAFIRREDPRDVLIVKGELSTL-- 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 H+VIGTSS RR+ L +++ + + RG + TRL KL+ AI+LA AG+KRL Sbjct: 119 PPHAVIGTSSPRRQCQLKKFQPGCKIKEIRGNVGTRLAKLDAGHYEAIVLAAAGLKRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I + +F P+ GQGAI +E ++ + Q L+K ++H +T V ERA +L Sbjct: 179 ENRIHYYFDPHEFIPAIGQGAIGVECRSDDHEMQTLLKSLDHRETRLCVTAERAVNEKLG 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C + IA A K L + ++ DG++ + GN +A IG A + Sbjct: 239 GDCFTPIAAHAIIKNDQLSLFAMLGKIDGRVIIRATEIGNSEEAQRIGFKVASQLLEQGG 298 Query: 302 KNVF 305 ++ Sbjct: 299 DSLL 302 >gi|229169206|ref|ZP_04296920.1| Porphobilinogen deaminase [Bacillus cereus AH621] gi|228614272|gb|EEK71383.1| Porphobilinogen deaminase [Bacillus cereus AH621] Length = 309 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 165/305 (54%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S KDLA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPDGLMIGCTPKRVDPRDAFISKNGESFKDLA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWD 178 Query: 183 -KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+ Sbjct: 179 GEVITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG + + G D +G +AA + Sbjct: 239 GGCQVPIAGYATLKENDAIELTALVGSMDGSVLLKEIVVG--NDPKQVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|163797975|ref|ZP_02191917.1| Porphobilinogen deaminase [alpha proteobacterium BAL199] gi|159176769|gb|EDP61340.1| Porphobilinogen deaminase [alpha proteobacterium BAL199] Length = 321 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 159/305 (52%), Gaps = 5/305 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R SPLAL E R L I + + T GD + +R L EIGGKGLF Sbjct: 15 LTLGSRGSPLALRQTHEVRDRLAAAWPELAGAIAVQEIRTTGDAVRDRPLAEIGGKGLFI 74 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L++G+ID AVHS KDM T + + A LPRED RD ++S A + DL + Sbjct: 75 KEIEQALMAGQIDAAVHSMKDMETTIAPASVLVAVLPREDPRDAWLSPIADRVDDLPSGA 134 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGT+S+RR A +L R D+ V+ FRG ++TRL KL + LA AG+ RL Sbjct: 135 KIGTASVRRAAQVLNRRPDLQVVLFRGNVDTRLRKLAEGEVAGTFLAAAGLSRLGMLDKA 194 Query: 186 KEILNIEDFPPSPGQGAICIETHV-----NNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 IL +++ P+ QGAI ++ + + + + +++ + V ERA LA L Sbjct: 195 TRILEVDEMLPAVSQGAIGVQCRDGEASARDAEIRNWLSILDDRPSRLRVTAERAMLATL 254 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSC++ IAG A G+ L G+V + DG+ H D +GR + I Sbjct: 255 DGSCRTPIAGHATLGGARLTLSGMVFSLDGQSSHGAVDTSATDDPEALGRTVGEAILARG 314 Query: 301 NKNVF 305 +N Sbjct: 315 GRNFL 319 >gi|300312229|ref|YP_003776321.1| porphobilinogen deaminase [Herbaspirillum seropedicae SmR1] gi|300075014|gb|ADJ64413.1| porphobilinogen deaminase protein [Herbaspirillum seropedicae SmR1] Length = 318 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 97/300 (32%), Positives = 153/300 (51%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A R L ++ P +I I+ +T+GD+I +R L+++GGKGLF Sbjct: 9 IVIVSRESRLAMWQAEYVRDRLAALY--PQCSISILGTTTRGDQILDRALSKVGGKGLFV 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E + G D AVH KDMP L +G +++A L RED RD F+S+ +L +L + Sbjct: 67 KELEVAMAEGRADLAVHCLKDMPMDLPEGFELAAILEREDPRDAFVSNDYAALDELPDGA 126 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+A++ + V RG ++TRL KL+ AI+LA AG+ RL + I Sbjct: 127 VVGTSSLRRQAMIAARYPQLVVKPLRGNLDTRLAKLDRGDYAAIILAVAGLNRLGLKARI 186 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L+ PSPGQG + IE + L+ ++ E ER+ SC+ Sbjct: 187 RSFLDPAQSLPSPGQGTLAIEIPEGREDIKRLLAPLHDEPAAVVSAAERSVSRIFGASCQ 246 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A +A G L+ ++ DG G +G A+ ++ ++ Sbjct: 247 IPLAAYATLDGQRLHLRAMIATPDGLHAAAAEAEGPAAAPEALGAQVAELLKARGADDIL 306 >gi|320335860|ref|YP_004172571.1| Porphobilinogen deaminase [Deinococcus maricopensis DSM 21211] gi|319757149|gb|ADV68906.1| Porphobilinogen deaminase [Deinococcus maricopensis DSM 21211] Length = 313 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 161/306 (52%), Gaps = 5/306 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR--TLTEIGGK 61 + +GTR S LALA + L + + P I +STKGDR + TL + G K Sbjct: 6 RSITVGTRGSALALAQTRWVVARLKE--EWPDTEFRIQTISTKGDRDRSSLETLAQKGDK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKD 120 G + +EIE L+S ID AVHS KD+PT +GL+IS+ R + RD I + L D Sbjct: 64 GFWVKEIEDALLSSRIDIAVHSLKDLPTAQPEGLEISSIPKRVEARDALIGKEGMKRLVD 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSS+RRKA L +R D+ V D RG ++TRL L N+ AI+LA AG+ RL+ Sbjct: 124 LPQGARIGTSSVRRKAFLRAFRPDLDVKDLRGNVDTRLAALAGNEYDAIILAAAGLTRLE 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E+++ + P+PGQGA+ +ET ++ A E+ I+ T D ER FLA L Sbjct: 184 MRNRIDELVDPDILLPAPGQGALALETRSDDDLAVEVAYAIHDRATDDRTTAEREFLAGL 243 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C + + A KG L G V A DG + G+ + ++G A+ + Sbjct: 244 GAGCMAPVGALATLKGGVLTLEGWVGALDGTQVIRATIEGDADECADLGAQLAEDMLAQG 303 Query: 301 NKNVFN 306 + + + Sbjct: 304 AQALID 309 >gi|229013679|ref|ZP_04170808.1| Porphobilinogen deaminase [Bacillus mycoides DSM 2048] gi|229135309|ref|ZP_04264103.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST196] gi|228648132|gb|EEL04173.1| Porphobilinogen deaminase [Bacillus cereus BDRD-ST196] gi|228747601|gb|EEL97475.1| Porphobilinogen deaminase [Bacillus mycoides DSM 2048] Length = 309 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 165/305 (54%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S KDLA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPDGLTIGCTPKRVDPRDAFISKNGESFKDLA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWD 178 Query: 183 -KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+ Sbjct: 179 GEVITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG + + G D +G +AA + Sbjct: 239 GGCQVPIAGYATLKENDAIELTALVGSMDGSVLLKEIVVG--NDPKQVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|224419071|ref|ZP_03657077.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491] gi|253828009|ref|ZP_04870894.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491] gi|313142581|ref|ZP_07804774.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491] gi|253511415|gb|EES90074.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491] gi|313131612|gb|EFR49229.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491] Length = 314 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 101/306 (33%), Positives = 158/306 (51%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + IGTR S LAL A + SL + P + + + TKGD+I + L +IGGKG Sbjct: 1 MQKIIIGTRGSVLALWQANFVKDSLEKQY--PNLQVELKIVKTKGDKILDVPLAKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E+ ++ GEID AVHS KD+P + ++GL ++A RED+RD F+S ++L++L Sbjct: 59 LFTKELEELMLKGEIDVAVHSLKDVPVEFVEGLGLAAITKREDVRDSFLSFKYKNLQELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GT+SLRR + R D+ + RG ++TRL +L AI+LA AG+ RL E Sbjct: 119 QGAKVGTTSLRRVMQINTLRKDLDCMSLRGNVQTRLKRLKEGDFDAIILAQAGVNRLGIE 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I ++ P+ GQ A+ IE + + +L++ +N + ER F+ L+G Sbjct: 179 GEVDCIAPLDFMIPAMGQAALGIECR-VDSEVAKLLEFLNDTKASFETSAEREFVKTLEG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV---SRNGNRCDAINIGRDAAQYIRFI 299 C+ I A + L I+ DG + + D GRD A Sbjct: 238 GCQVPIGINATLEKDNLTIRAILGIPDGSRILKDAKVCAVSSLEDCKKAGRDFALEFIKK 297 Query: 300 SNKNVF 305 K + Sbjct: 298 GAKEIL 303 >gi|309784521|ref|ZP_07679159.1| porphobilinogen deaminase [Shigella dysenteriae 1617] gi|308927627|gb|EFP73096.1| porphobilinogen deaminase [Shigella dysenteriae 1617] Length = 286 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 99/272 (36%), Positives = 149/272 (54%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 5 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 64 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 65 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 125 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 184 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 185 TRELLVALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 244 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 R G DA +G A+ + + + Sbjct: 245 IRGERRGAPQDAEQMGISLAEELLNNGAREIL 276 >gi|66933009|ref|NP_001019553.1| porphobilinogen deaminase isoform 2 [Homo sapiens] Length = 344 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LA ++L + P II +ST GD+I + L++IG K Sbjct: 1 MRVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKS 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 59 LFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLE 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKR 178 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R Sbjct: 119 TLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 179 MGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 239 HLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQL 298 Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 299 VGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 335 >gi|292386|gb|AAA60029.1| hydroxymethylbilane synthase [Homo sapiens] Length = 361 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 158/338 (46%), Gaps = 35/338 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA ++L + P II +ST GD+I + L++IG K Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177 + L SV+GTSSLRR A L R + RG + TRL K++ + AI+LA AG++ Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKMDEQQEFSAIILATAGLQ 194 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 195 RMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 254 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 255 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQ 314 Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 315 LVGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 352 >gi|257092424|ref|YP_003166065.1| porphobilinogen deaminase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044948|gb|ACV34136.1| porphobilinogen deaminase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 315 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 103/300 (34%), Positives = 152/300 (50%), Gaps = 2/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A L +++ P + I+ ++T+GD+I +R L IGGKGLF Sbjct: 11 LVIASRESRLAMWQAQHVSGRLTELY--PQTAVDILGMTTRGDQILDRPLAAIGGKGLFI 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E + G D AVHS KD+P ++ +G ++A RE+ D F+S+ L +L ++ Sbjct: 69 KELEVAMQQGRADLAVHSMKDLPMEMPEGFALAAISVRENPCDAFVSNRFGGLAELPANA 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+A+L + + RG ++TRL KL+ AI+LA AG+ RL I Sbjct: 129 VVGTSSLRREAMLRAGYPQLEIRSLRGNLDTRLRKLDAGDYDAIILAAAGLIRLGLTDRI 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 K +L E P+PGQG + IE LV +N T V ERAF L GSC+ Sbjct: 189 KAVLTPEQSLPAPGQGVLGIEVLSARVDLLTLVAPLNDVATAHCVRAERAFSRALGGSCQ 248 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A A L+ G + DG+ G D +IG AQ + + Sbjct: 249 IPLAAHAVLDSGALWLRGWIATPDGRHSLSGELRGLPEDDESIGCRLAQALHERGADAIL 308 >gi|301788448|ref|XP_002929638.1| PREDICTED: porphobilinogen deaminase-like isoform 1 [Ailuropoda melanoleuca] Length = 361 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 158/338 (46%), Gaps = 35/338 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA + L + P I+ +ST GD+I + L++IG K Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVAMLKAFY--PGLQFEIVAMSTTGDKILDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177 + L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++ Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQ 194 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 195 RMGWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIAERAFL 254 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 255 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSMQETMQATIRVTAQLEDGPEDDPQ 314 Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 315 LVGITARNIPREAQLAAENLGISLASLLLNKGAKNILD 352 >gi|325266571|ref|ZP_08133248.1| hydroxymethylbilane synthase [Kingella denitrificans ATCC 33394] gi|324982014|gb|EGC17649.1| hydroxymethylbilane synthase [Kingella denitrificans ATCC 33394] Length = 313 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 99/303 (32%), Positives = 158/303 (52%), Gaps = 3/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + I +R S LA+ A ++ L ++ P + I+ ++T+GD+I ++TL++IGGKGL Sbjct: 5 QKLTIASRESALAMWQAEHIQAKLQALY--PSCTVDILGMTTQGDQILDKTLSKIGGKGL 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L D AVHS KD+P L +G + A R + D +S+ + L++L Sbjct: 63 FIKELETALQENRADLAVHSLKDVPMDLPEGFVLVAVGERANPFDALVSNRFERLEELPE 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR+A L + V RG ++TRL KL+N AI+LA AG++RL+ Sbjct: 123 GAVVGTSSLRREAQLRARFPHLQVKPLRGNVQTRLAKLDNGDYDAIILAAAGLERLQLHG 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ +L D P+ GQGA+ IE + +++ +NH T V ERA L GS Sbjct: 183 RIRNLLPPSDSLPAAGQGALGIEIAAHRTDLVDILLPLNHAQTAACVTAERALARALGGS 242 Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ + + L +G+V DG + + A +GR A+ + + Sbjct: 243 CQVPLGAYCTADEYGLLTLHGLVAHPDGSVVMTANAQAPAPYADALGRAVAKKLSDDGAR 302 Query: 303 NVF 305 V Sbjct: 303 EVI 305 >gi|35309|emb|CAA28499.1| unnamed protein product [Homo sapiens] Length = 361 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 107/338 (31%), Positives = 157/338 (46%), Gaps = 35/338 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA ++L + P II +ST GD+I + L++IG K Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177 + L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++ Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQ 194 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + +IL+ E + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 195 RMGWHNRVGQILHPEKCMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 254 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 255 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQ 314 Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 315 LVGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 352 >gi|299822782|ref|ZP_07054668.1| hydroxymethylbilane synthase [Listeria grayi DSM 20601] gi|299816311|gb|EFI83549.1| hydroxymethylbilane synthase [Listeria grayi DSM 20601] Length = 311 Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 112/308 (36%), Positives = 165/308 (53%), Gaps = 8/308 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ + +G+R S LAL + L + P + I + TKGD+I + TL+++GG Sbjct: 1 MKSQ-IIVGSRRSKLALVQTNWVINELKKHY--PTIDFRIEEMVTKGDKILDVTLSKVGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF E+E+ L+ ID AVHS KD+P + +GL I+A RE DVF+ D Sbjct: 58 KGLFVSEVEQALVDKHIDFAVHSMKDVPAVIEEGLTIAAIPERESANDVFVFKEVHDFGD 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++IGTSSLRR + +L R D+ + RG I+TRL KL AI+LA AG+ R+ Sbjct: 118 LPTQAIIGTSSLRRASQILAERPDLQIKFIRGNIDTRLRKLREEDFDAIILAQAGLSRMG 177 Query: 181 K---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + + + + P+ GQGA+ IE + +++++ I+H T + V ERAFL Sbjct: 178 WLEDDSLRIQTIPETICLPAVGQGALAIECREEDNDTKDILRSIHHAITANCVAAERAFL 237 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L+G C+ IAG+A GS + F G+V DGK E R G DA IG +AA + Sbjct: 238 KTLNGGCEIPIAGYATQSGSKVSFKGLVGTPDGKTIWEAERVG--EDADQIGTEAANELL 295 Query: 298 FISNKNVF 305 + Sbjct: 296 EKGAGALI 303 >gi|258645838|ref|ZP_05733307.1| hydroxymethylbilane synthase [Dialister invisus DSM 15470] gi|260403210|gb|EEW96757.1| hydroxymethylbilane synthase [Dialister invisus DSM 15470] Length = 307 Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 169/305 (55%), Gaps = 2/305 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K I TR S LAL A + + D + P + ++P++TKGD+I +R+L EIGGK Sbjct: 1 MKDKIIIATRESLLALWQAEHVKKRIEDTY--PEIQVELLPVTTKGDQILDRSLLEIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+EK L+ + D AVHS KDM + GL+++A RED RD F+S SL++L Sbjct: 59 GLFIKELEKLLLEKKADIAVHSLKDMTAVIPDGLKLAAVTAREDPRDAFVSLEYGSLQEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSSLRR+A LL D+ + RG ++TRL L+ A++LA AG+KRL Sbjct: 119 PEGAVVGTSSLRRQAQLLHLWPDLQIKTLRGNVQTRLRHLDEGNYDAVILAAAGLKRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 ++ I+ ++ D P+ GQG + IET + + + E+++ I+ E + ERAFL ++ Sbjct: 179 QERIQSYISTCDSIPAAGQGVMAIETRIGDDETMEIIQFIHDEKVASCIMAERAFLEKVG 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G CK +A + + + DGK ++ S NG DA +G A+ + Sbjct: 239 GDCKVPAGIYAVPFLGHIEAVAFIGSPDGKEMYKRSLNGQTQDAKQLGESLAEALIADGG 298 Query: 302 KNVFN 306 + Sbjct: 299 GRILE 303 >gi|297690413|ref|XP_002822613.1| PREDICTED: porphobilinogen deaminase-like isoform 1 [Pongo abelii] Length = 361 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 107/338 (31%), Positives = 159/338 (47%), Gaps = 35/338 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFAGKTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177 + L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++ Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQ 194 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 195 RMGWHNGVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 254 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 255 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMHATIHVPAQHEDGPEDDPQ 314 Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 315 LVGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 352 >gi|71892349|ref|YP_278083.1| porphobilinogen deaminase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|123747812|sp|Q491Z6|HEM3_BLOPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|71796455|gb|AAZ41206.1| porphobilinogen deaminase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 300 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 97/297 (32%), Positives = 145/297 (48%), Gaps = 2/297 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ K +I TR S LA+ A + L H P +I ++P+ T GD+ N Sbjct: 1 MKNKILKIATRKSQLAICQAQYVHNELK--HYHPTLSIELMPIVTTGDKFLNIDAKNKIK 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG F +E+E LI+ D AVHS KD+ L L + R D RD F+S ++ Sbjct: 59 KGAFIKELEHALINFRADIAVHSMKDITVPLPDELTLPVLCKRNDPRDAFVSLKYPNIDT 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + SVIGTSSLRR+ + R D+ V + RG I+TRL KL + AI+LA AG++RL+ Sbjct: 119 LPIGSVIGTSSLRRQCQIRAHRPDLVVSNLRGNIDTRLKKLQYGQYDAIVLAVAGLQRLQ 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ ++ D P+ GQG I IE N+ L+ + H++T V ERA L Sbjct: 179 LHEYIRVHIDPSDLLPAMGQGVIAIECRSNDADILSLLSPLYHQETSFRVRAERAVTTYL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + C IA +A + ++ ++ DG A +G A+ + Sbjct: 239 ESYCHLPIASYAEIEEDQIWLRALIGLPDGSKIIRTEGRAPLDQAEKLGFILAEDLL 295 >gi|292385|gb|AAA60030.1| hydroxymethylbilane synthase [Homo sapiens] Length = 344 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LA ++L + P II +ST GD+I + L++IG K Sbjct: 1 MRVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKS 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 59 LFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLE 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKR 178 L SV+GTSSLRR A L R + RG + TRL K++ + AI+LA AG++R Sbjct: 119 TLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKMDEQQEFSAIILATAGLQR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 179 MGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 239 HLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQL 298 Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 299 VGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 335 >gi|73955044|ref|XP_546491.2| PREDICTED: similar to Porphobilinogen deaminase (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) (PBG-D) [Canis familiaris] Length = 361 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 159/338 (47%), Gaps = 35/338 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA + L ++ P I+ +ST GD+I + L++IG K Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVAMLKALY--PGLQFEIVAMSTTGDKILDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177 + L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++ Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDELQEFSAIILAAAGLQ 194 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 195 RMGWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIAERAFL 254 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 255 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSMQETMQATIHITAQHEDGPEDDPQ 314 Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 315 LVGITARNIPREAQLAAENLGISLASLLLNKGAKNILD 352 >gi|212275007|ref|NP_001130048.1| hypothetical protein LOC100191140 [Zea mays] gi|194688160|gb|ACF78164.1| unknown [Zea mays] Length = 394 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 131/301 (43%), Positives = 180/301 (59%), Gaps = 5/301 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGL Sbjct: 48 IRIGTRGSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGL 107 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L Sbjct: 108 FTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPA 167 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+G++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RLK + Sbjct: 168 GSVVGSASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLKMAE 227 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+ Sbjct: 228 NATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVTCEREFLAVLDGN 287 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFIS 300 C++ IA +AY F G++ + DG E +R+G D + +G+DA +R Sbjct: 288 CRTPIAAYAYRDKDGNCSFRGLLSSPDGSKVFETARSGPYSFDDMVEMGKDAGHELRRRL 347 Query: 301 N 301 Sbjct: 348 G 348 >gi|301788450|ref|XP_002929639.1| PREDICTED: porphobilinogen deaminase-like isoform 2 [Ailuropoda melanoleuca] Length = 344 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LA + L + P I+ +ST GD+I + L++IG K Sbjct: 1 MRVIRVGTRKSQLARIQTDSVVAMLKAFY--PGLQFEIVAMSTTGDKILDTALSKIGEKS 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 59 LFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLE 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKR 178 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R Sbjct: 119 TLPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 179 MGWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIAERAFLR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 239 HLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSMQETMQATIRVTAQLEDGPEDDPQL 298 Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 299 VGITARNIPREAQLAAENLGISLASLLLNKGAKNILD 335 >gi|161831110|ref|YP_001595911.1| porphobilinogen deaminase [Coxiella burnetii RSA 331] gi|189028089|sp|A9N910|HEM3_COXBR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|161762977|gb|ABX78619.1| porphobilinogen deaminase [Coxiella burnetii RSA 331] Length = 307 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 104/304 (34%), Positives = 158/304 (51%), Gaps = 4/304 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K+ I TR SPLAL A + + + H P I+ +T+GDR+T L + GGK Sbjct: 3 KKRSILIVTRKSPLALWQAEFVKQQIENSH--PHLACQILGCTTQGDRLTTEKLVDSGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 LF ++++K L++ + D AVHS KDM L + A++ RED RDV I S Sbjct: 61 DLFVKDLQKALLNRDADIAVHSIKDMSACDGPELMVGAFIRREDPRDVLIVKGELSTL-- 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 H+VIGTSS RR+ L +++ + + RG + TRL KL+ AI+LA AG+KRL Sbjct: 119 PPHAVIGTSSPRRQCQLKKFQPGCKIKEIRGNVGTRLAKLDAGHYEAIVLAAAGLKRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I + +F P+ GQGAI +E ++ + Q L+K ++H +T V ERA +L Sbjct: 179 ENRIHYYFDPHEFIPAIGQGAIGVECRSDDHEMQTLLKSLDHRETRLCVTAERAVNEKLG 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C + IA A K + ++ DG++ + GN +A IG A + Sbjct: 239 GDCFTPIAAHAIIKNDQFSLFAMLGKIDGRVIIRATEIGNSEEAKRIGFKVASQLLEQGG 298 Query: 302 KNVF 305 ++ Sbjct: 299 DSLL 302 >gi|295317399|ref|NP_001171279.1| porphobilinogen deaminase isoform 1a [Felis catus] gi|289191079|gb|ADC93652.1| hydroxymethylbilane synthase housekeeping form 1a [Felis catus] Length = 361 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 159/338 (47%), Gaps = 35/338 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA + L ++ P I+ +ST GD+I + L++IG K Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVAVLKALY--PGLQFEIVAMSTTGDKILDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177 + L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++ Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDEFQEFSAIILAAAGLQ 194 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 195 RMGWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 254 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 255 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSMQETMQATICVTAQHEDGPEDDPQ 314 Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 315 LVGITARNIPRQAQLAAENLGISLASLLLNKGAKNILD 352 >gi|319892715|ref|YP_004149590.1| Porphobilinogen deaminase [Staphylococcus pseudintermedius HKU10-03] gi|317162411|gb|ADV05954.1| Porphobilinogen deaminase [Staphylococcus pseudintermedius HKU10-03] Length = 309 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 175/305 (57%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L +V P +I I + TKGD+I +R L+++GGKG Sbjct: 1 MRKLIVGSRRSQLALTQSQQFIDRLKEV--DPTLDIEIKEIVTKGDQIVDRQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L + +ID A+HS KD+P++L +GL + RE+ D FIS L +L Sbjct: 59 LFVKEIQNELFNRDIDMAIHSLKDVPSELPEGLTLGCIPDRENPFDAFISKNHIPLDELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG+KR+ Sbjct: 119 DGSIIGTSSLRRGAQILAKYPNLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ L+ + P+ GQGA+ IE ++ + L+ +++ED V ER FL E++ Sbjct: 179 DDIVTTYLDEDLLVPAIGQGALGIECRADDDELLALLAKVHNEDVSACVTAERTFLKEMN 238 Query: 242 GSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ I G+A K T + F G++++ DGK E + +G D I +G + ++ ++ Sbjct: 239 GSCQVPIGGYATRKNDTEIQFTGLIMSPDGKQRFEYTFSG--QDPIQVGSEVSRVLKSQG 296 Query: 301 NKNVF 305 + Sbjct: 297 ADKII 301 >gi|332750972|gb|EGJ81377.1| porphobilinogen deaminase [Shigella flexneri 4343-70] gi|332751059|gb|EGJ81463.1| porphobilinogen deaminase [Shigella flexneri K-671] Length = 286 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 99/272 (36%), Positives = 149/272 (54%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 5 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 64 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 65 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 125 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTR 184 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 185 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLCALVGAPDGSQI 244 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 R G DA +G A+ + + + Sbjct: 245 IRGERRGAPQDAEQMGISLAEELLNNGAREIL 276 >gi|224510663|pdb|3EQ1|A Chain A, The Crystal Structure Of Human Porphobilinogen Deaminase At 2.8a Resolution gi|224510664|pdb|3EQ1|B Chain B, The Crystal Structure Of Human Porphobilinogen Deaminase At 2.8a Resolution Length = 361 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 158/338 (46%), Gaps = 35/338 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA ++L + P II +ST GD+I + L++IG K Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177 + L SV+GTSSLRR A L R + +G + TRL KL+ + AI+LA AG++ Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIQGNLNTRLRKLDEQQEFSAIILATAGLQ 194 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 195 RMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 254 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 255 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQ 314 Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 315 LVGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 352 >gi|315122376|ref|YP_004062865.1| porphobilinogen deaminase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495778|gb|ADR52377.1| porphobilinogen deaminase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 307 Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats. Identities = 243/306 (79%), Positives = 276/306 (90%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 ME+K F+IGTR SPLALAHAFETRS LM VHKIP I ++PLSTKGDRITNRTLTEIGG Sbjct: 1 MEEKDFKIGTRRSPLALAHAFETRSYLMSVHKIPLEKIFVVPLSTKGDRITNRTLTEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEEIE+KLISGEID AVHSAKDMPTKLLKGL+ISAYLPRED+RDVFISHTAQSL D Sbjct: 61 KGLFTEEIERKLISGEIDFAVHSAKDMPTKLLKGLRISAYLPREDVRDVFISHTAQSLND 120 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 LA++S++GTSSLRRKALLLRWR+D+S+IDFRGKIETRL KL N +A A+LLAYAGIKRLK Sbjct: 121 LAVNSIVGTSSLRRKALLLRWRADLSIIDFRGKIETRLTKLKNKQADAMLLAYAGIKRLK 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 KE V+KEILN+EDFPPSPGQGAICIETH+NN +A EL INH +TWD+V+CERAFLAEL Sbjct: 181 KESVVKEILNLEDFPPSPGQGAICIETHMNNTRAHELATAINHRETWDTVSCERAFLAEL 240 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 DGSCKSAIAGF+YCKG +LYFYG +L DGKIFHEVS++GN CDAI IGRDA ++IR I+ Sbjct: 241 DGSCKSAIAGFSYCKGQSLYFYGTILTPDGKIFHEVSKSGNCCDAIQIGRDAGRHIRLIA 300 Query: 301 NKNVFN 306 +K +FN Sbjct: 301 DKTIFN 306 >gi|315635705|ref|ZP_07890968.1| hydroxymethylbilane synthase [Arcobacter butzleri JV22] gi|315480002|gb|EFU70672.1| hydroxymethylbilane synthase [Arcobacter butzleri JV22] Length = 312 Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats. Identities = 111/309 (35%), Positives = 162/309 (52%), Gaps = 8/309 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK I TR S LAL + ++ L++ + P I + TKGD+I + L +IGG Sbjct: 1 MEK--LVIATRRSQLALWQSEYVKARLLEHY--PNMQIELQEFVTKGDKILDVPLAKIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E ++ G AVHS KD+PT+ GL ++A R D RD F+S+ SL++ Sbjct: 57 KGLFTKELEVAMLEGSAHLAVHSLKDVPTQFEDGLMLAAVTKRFDPRDAFLSNKYTSLEE 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT+SLRR+ L R DI + D RG I TR+ KLN + AI+LA GI++L Sbjct: 117 LPKGAVVGTTSLRRRMALKILRPDIELKDLRGNINTRIAKLNAGEYDAIILAATGIQKLG 176 Query: 181 KEKVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 E +K + PS GQ + IET N+PK E++KV+N + ER+F+ Sbjct: 177 IENEVKYFSPISTDVMIPSMGQATLGIETT-NDPKVLEILKVLNDNNAHIESTIERSFVD 235 Query: 239 ELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L G C+ I A +++ IV DG + + D IG++ AQ Sbjct: 236 TLQGGCQVPIGVKATILDENSIRVQAIVGMPDGSEYISEDITADIEDYETIGQNLAQIFI 295 Query: 298 FISNKNVFN 306 K + Sbjct: 296 DQGAKELLE 304 >gi|54295573|ref|YP_127988.1| porphobilinogen deaminase HemC [Legionella pneumophila str. Lens] gi|61213284|sp|Q5WT65|HEM3_LEGPL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|53755405|emb|CAH16901.1| Porphobilinogen deaminase HemC [Legionella pneumophila str. Lens] Length = 309 Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats. Identities = 105/306 (34%), Positives = 159/306 (51%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A R L+ + P +I ++P+ T GDR L GG Sbjct: 1 MSAKIIRIATRQSPLALWQANHVREMLVK--QWPNLSIELLPMITSGDRFLKDKLLSAGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL Sbjct: 59 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLSLAAICKRDNPFDALISPQFKSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++IGTSSLRR++ LL + ++ V RG I TRL+KL + + AI+LA AG++R+ Sbjct: 119 LPKNAIIGTSSLRRQSQLLAYNPNLQVKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ + P+ QGA+CIE ++ + QEL+ +N + V+ ER A+L Sbjct: 179 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELIYGLNDPISALCVHTERRVNAKL 238 Query: 241 DGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G+C A + + L VL DG + + G +A I + + Sbjct: 239 GGNCHIPFAVYCTITAENLLLLRAKVLNLDGSQMIDDEQQGKIEEAEIIADRCTESLMTK 298 Query: 300 SNKNVF 305 + Sbjct: 299 GAMTLL 304 >gi|323464250|gb|ADX76403.1| porphobilinogen deaminase [Staphylococcus pseudintermedius ED99] Length = 309 Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 175/305 (57%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L +V P +I I + TKGD+I +R L+++GGKG Sbjct: 1 MRKLIVGSRRSQLALTQSQQFIDRLKEV--DPTLDIEIKEIVTKGDQIVDRQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L S +ID A+HS KD+P++L +GL + RE+ D FIS L +L Sbjct: 59 LFVKEIQNELFSRDIDMAIHSLKDVPSELPEGLTLGCIPDRENPFDAFISKNHIPLDELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG+KR+ Sbjct: 119 DGSIIGTSSLRRGAQILAKYPNLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ L+ + P+ GQGA+ IE ++ + L+ +++ED V ER FL E++ Sbjct: 179 DDIVTTYLDEDLLVPAIGQGALGIECRADDDELLALLAKVHNEDVSACVTAERTFLKEMN 238 Query: 242 GSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ I G+A K T + F G++++ DGK E + +G D I +G + ++ ++ Sbjct: 239 GSCQVPIGGYATRKNDTEIQFTGLIMSPDGKQRFEYTFSG--QDPIQVGSEVSRVLKSQG 296 Query: 301 NKNVF 305 + Sbjct: 297 ADKII 301 >gi|157736544|ref|YP_001489227.1| porphobilinogen deaminase [Arcobacter butzleri RM4018] gi|167008810|sp|A8ERI4|HEM3_ARCB4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157698398|gb|ABV66558.1| porphobilinogen deaminase [Arcobacter butzleri RM4018] Length = 312 Score = 235 bits (599), Expect = 7e-60, Method: Composition-based stats. Identities = 111/309 (35%), Positives = 162/309 (52%), Gaps = 8/309 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK I TR S LAL + +S L++ + P I + TKGD+I + L +IGG Sbjct: 1 MEK--LVIATRRSQLALWQSEYVKSRLLEHY--PNMQIELQEFVTKGDKILDVPLAKIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E ++ G AVHS KD+PT+ GL ++A R D RD F+S+ SL++ Sbjct: 57 KGLFTKELEVAMLEGSAHLAVHSLKDVPTQFEDGLMLAAVTKRFDPRDAFLSNKYTSLEE 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT+SLRR+ L R DI + D RG I TR+ KLN + AI+LA GI++L Sbjct: 117 LPKGAIVGTTSLRRRMALKILRPDIELKDLRGNINTRIAKLNAGEYDAIILAATGIQKLG 176 Query: 181 KEKVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 E +K + PS GQ + IET N+PK E++KV+N + ER+F+ Sbjct: 177 IENEVKYFSPISTDIMIPSMGQATLGIETT-NDPKVLEILKVLNDNNAHIESTVERSFVD 235 Query: 239 ELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L G C+ I A +++ IV DG + + D IG++ AQ Sbjct: 236 TLQGGCQVPIGVKATILDENSIRVQAIVGMPDGSEYISEDITADIEDYETIGQNLAQIFI 295 Query: 298 FISNKNVFN 306 K + Sbjct: 296 DQGAKELLE 304 >gi|297690415|ref|XP_002822614.1| PREDICTED: porphobilinogen deaminase-like isoform 2 [Pongo abelii] gi|297690417|ref|XP_002822615.1| PREDICTED: porphobilinogen deaminase-like isoform 3 [Pongo abelii] gi|297690419|ref|XP_002822616.1| PREDICTED: porphobilinogen deaminase-like isoform 4 [Pongo abelii] Length = 344 Score = 235 bits (598), Expect = 8e-60, Method: Composition-based stats. Identities = 107/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K Sbjct: 1 MRVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEKS 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 59 LFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFAGKTLE 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKR 178 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R Sbjct: 119 TLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 179 MGWHNGVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 239 HLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMHATIHVPAQHEDGPEDDPQL 298 Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 299 VGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 335 >gi|295317401|ref|NP_001171280.1| porphobilinogen deaminase isoform 2a [Felis catus] gi|289191083|gb|ADC93654.1| hydroxymethylbilane synthase erythroid form 2a [Felis catus] gi|289191085|gb|ADC93655.1| hydroxymethylbilane synthase erythroid form 2b [Felis catus] Length = 344 Score = 235 bits (598), Expect = 8e-60, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LA + L ++ P I+ +ST GD+I + L++IG K Sbjct: 1 MRVIRVGTRKSQLARIQTDSVVAVLKALY--PGLQFEIVAMSTTGDKILDTALSKIGEKS 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 59 LFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLE 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKR 178 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R Sbjct: 119 TLPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDEFQEFSAIILAAAGLQR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 179 MGWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 239 HLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSMQETMQATICVTAQHEDGPEDDPQL 298 Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 299 VGITARNIPRQAQLAAENLGISLASLLLNKGAKNILD 335 >gi|313893126|ref|ZP_07826703.1| hydroxymethylbilane synthase [Veillonella sp. oral taxon 158 str. F0412] gi|313442479|gb|EFR60894.1| hydroxymethylbilane synthase [Veillonella sp. oral taxon 158 str. F0412] Length = 305 Score = 235 bits (598), Expect = 8e-60, Method: Composition-based stats. Identities = 104/278 (37%), Positives = 158/278 (56%), Gaps = 2/278 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + L ++ P + ++ +TKGDRI + L ++GGKGLFT Sbjct: 5 IRIGTRKSALALWQAEHISAELQRLY--PNITVELVHFNTKGDRILEKPLAQVGGKGLFT 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E+E+ + G+ID AVHS KDMPT+L +GL + A RE D +S ++L L + Sbjct: 63 AELEEAMHKGDIDIAVHSLKDMPTELPEGLTLGAISAREVPYDALVSPVYKTLDKLPQGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A LL R D+ V RG ++TRL+K+ K ++LA AG+KRL + I Sbjct: 123 RVGTSSLRRQAQLLHVRPDLKVEVIRGNVQTRLSKIETEKLDGVILAQAGLKRLGLDDQI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ ++ P+ GQGA+ IE ++ + E++ IN E T +V ER+FL +L+G C+ Sbjct: 183 TQVFKADEMIPAVGQGALAIECRADDTEMLEMLAPINDEATRYAVEGERSFLRQLNGGCQ 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283 + L ++ + DGK +E +G Sbjct: 243 VPMGVHGTIDKGQLTLKAMIASLDGKTVYEGEISGPAK 280 >gi|35307|emb|CAA27801.1| unnamed protein product [Homo sapiens] Length = 344 Score = 235 bits (598), Expect = 9e-60, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 156/337 (46%), Gaps = 35/337 (10%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LA ++L + P II +ST GD+I + L++IG K Sbjct: 1 MRVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKS 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 59 LFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLE 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKR 178 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R Sbjct: 119 TLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 179 MGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 239 HLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQL 298 Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + K + + Sbjct: 299 VGITARNIPRGPQLAAQNLGISLANLLLSKGAKTILD 335 >gi|186476930|ref|YP_001858400.1| porphobilinogen deaminase [Burkholderia phymatum STM815] gi|238058733|sp|B2JEN9|HEM3_BURP8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|184193389|gb|ACC71354.1| porphobilinogen deaminase [Burkholderia phymatum STM815] Length = 327 Score = 235 bits (598), Expect = 9e-60, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 165/303 (54%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLVIASRESRLAMWQAEHVRCALHKLY--PSCDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L +G +S + RED RD F+S+ SL L Sbjct: 71 VKELENALADGRADLAVHSLKDVPMELPEGFVLSTIMEREDPRDAFVSNQYDSLAALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SV+GTSSLRR+A+L ++ V RG ++TRL KL+ AI+LA AG+KRL + Sbjct: 131 SVVGTSSLRREAMLRARYPELVVKPLRGNLDTRLGKLDRGDYAAIILAAAGLKRLGLGER 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+ D P+ GQGA+ IE + ++HE T +V ER L GSC Sbjct: 191 IRSLLDPADSLPAAGQGALGIEIRAGRDDLAAWLAPLHHEHTAAAVEAERMVSRTLGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISN 301 + +A +A L+ GIV DG+ + A+ +GR+ A + Sbjct: 251 EVPLAAYATWHDGALHLRGIVATPDGERVLSAQASAPAATTDAALELGREVASQLEAQGA 310 Query: 302 KNV 304 ++ Sbjct: 311 LDI 313 >gi|163942212|ref|YP_001647096.1| porphobilinogen deaminase [Bacillus weihenstephanensis KBAB4] gi|229836104|sp|A9VIT8|HEM3_BACWK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|163864409|gb|ABY45468.1| porphobilinogen deaminase [Bacillus weihenstephanensis KBAB4] Length = 309 Score = 235 bits (598), Expect = 9e-60, Method: Composition-based stats. Identities = 116/305 (38%), Positives = 165/305 (54%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P+ + + TKGD I + TL+++GGKG Sbjct: 1 MRKIIVGSRKSKLALTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE L++ EID AVHS KDMP L GL I R D RD FIS +S KDLA Sbjct: 59 LFVKEIEHALLTKEIDMAVHSMKDMPAVLPDGLTIGCTPKRVDPRDAFISKNGESFKDLA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSSLRR A LL R D+ V RG I+TRL KL + AI+LA AG++R+ + Sbjct: 119 EGAILGTSSLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKDEDYDAIILATAGLQRMGWD 178 Query: 183 -KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +VI E L+ P+ GQGA+ IE ++ +L+ IN T +V ER FL +L+ Sbjct: 179 GEVITEHLDETLCVPAVGQGALAIECREDDTDLLQLLAHINDAVTERTVAAERVFLHKLE 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG+A + + +V + DG + + G D +G +AA + Sbjct: 239 GGCQVPIAGYATLKENDAIELTALVGSMDGSVLLKEIVVG--IDPKQVGLEAADRLIKQG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELI 301 >gi|145346959|ref|XP_001417948.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578176|gb|ABO96241.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 325 Score = 235 bits (598), Expect = 9e-60, Method: Composition-based stats. Identities = 116/304 (38%), Positives = 172/304 (56%), Gaps = 4/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +IGTR SPLALA A+ TR L + + I + T GD++ ++ L +IGGKGL Sbjct: 12 VKIGTRGSPLALAQAYMTRDLLKENFPELAEDGALEICIIKTTGDKVLDQPLADIGGKGL 71 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT E++ L+ G ID AVHS KD+PT L +G+ + LPRED+RD F+ SL L Sbjct: 72 FTRELDDALLDGRIDIAVHSMKDVPTYLPEGMVLPCMLPREDVRDAFLCLKYDSLSQLPE 131 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GT+SLRR++ LL + ++FRG +++R+ KL LLA AG+KR+ + Sbjct: 132 GAVVGTASLRRQSQLLYKFPTLKCVNFRGNVQSRIRKLKEEVVDCTLLAIAGLKRMDLAQ 191 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 K I+ E+ P+ QGAI I + K + +NHEDT +V ER+FLA LDGS Sbjct: 192 HAKVIIPTEEMLPAVAQGAIGITCRAGDDKQLAFLAKLNHEDTRMAVEGERSFLAALDGS 251 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI--GRDAAQYIRFISN 301 C++ IA + + F G++ + DGK E +R G A + G+DA ++ + Sbjct: 252 CRTPIAAHCHLVDGKMQFRGLIASLDGKQVLETTREGAWDAASLLDAGKDAGAELKGKAP 311 Query: 302 KNVF 305 + F Sbjct: 312 ADFF 315 >gi|313680762|ref|YP_004058501.1| hydroxymethylbilane synthase [Oceanithermus profundus DSM 14977] gi|313153477|gb|ADR37328.1| hydroxymethylbilane synthase [Oceanithermus profundus DSM 14977] Length = 303 Score = 235 bits (598), Expect = 9e-60, Method: Composition-based stats. Identities = 103/304 (33%), Positives = 150/304 (49%), Gaps = 8/304 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +GTR S LAL L + P I + TKGDR + + Sbjct: 1 MRVIVVGTRGSLLALTQTRWAVERLKE--NWPETEFKIKTIQTKGDRGADPR-----EQN 53 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDL 121 +F E+E+ L GEID AVHS KD+PT +GL I+ R D RDVFI ++ + DL Sbjct: 54 IFVGELEEALRRGEIDIAVHSLKDLPTTQPEGLVIAGVPRRVDPRDVFIGRNSVARMADL 113 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSS+RR+A LL WR D+ ++ RG +++RL +L + I+LA AG+ RL+ Sbjct: 114 PKGARIGTSSVRRRAQLLAWRDDLEIVPLRGNVDSRLKRLVSEDLDGIILAAAGLLRLEM 173 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I E ++ E P+PGQGA+ +E + A EL +NH T V ER FL L Sbjct: 174 RNRIGEFVDPEILLPAPGQGALALEVREGDDMADELAYSLNHAPTRARVLAERGFLHGLG 233 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C + + A + L VL+ DGK G+ +A +G + A+ + Sbjct: 234 AGCLAPVGALAQIEDDVLVLDAGVLSLDGKTLIRGEIEGDPEEAWELGLELARDVLEAGG 293 Query: 302 KNVF 305 + V Sbjct: 294 REVL 297 >gi|168034136|ref|XP_001769569.1| predicted protein [Physcomitrella patens subsp. patens] gi|162679111|gb|EDQ65562.1| predicted protein [Physcomitrella patens subsp. patens] Length = 361 Score = 235 bits (598), Expect = 9e-60, Method: Composition-based stats. Identities = 135/306 (44%), Positives = 186/306 (60%), Gaps = 4/306 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A++TR L H + I+ + T GD+I ++ L +IGGKGL Sbjct: 56 VRIGTRGSPLALAQAYQTRDKLKAAHPELAEEGALDIVIIKTTGDKILSQPLADIGGKGL 115 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L++G+ID AVHS KD+PT L +G + LPRED+RD FI SL +L Sbjct: 116 FTKEIDDALLNGDIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICPKYSSLAELPE 175 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 SV+G++SLRR++ LL + V++FRG ++TRL KLN A LLA AG+KRL + Sbjct: 176 GSVVGSASLRRQSQLLHRYPHLQVVNFRGNVQTRLRKLNEGVCAATLLALAGLKRLDMTE 235 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I IL +D P+ QGAI I + K +E + +NHEDT +++CERAFLA+LDGS Sbjct: 236 HITAILETDDMLPAIAQGAIGIACRTGDTKMEEYLASLNHEDTRLAISCERAFLAKLDGS 295 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFISN 301 C++ IAG A F G+V +DGK E SR G + D I + +DA Q + + Sbjct: 296 CRTPIAGLAQRTEDGCLFRGLVATTDGKQVLETSRTGSFSYDDMIALAQDAGQELISRAG 355 Query: 302 KNVFNF 307 F + Sbjct: 356 PGFFQW 361 >gi|102139875|gb|ABF70028.1| porphobilinogen deaminase, chloroplast (hydroxymethylbilane synthase) (pre-uroporphyrinogen synthase), putative [Musa acuminata] Length = 426 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 125/301 (41%), Positives = 178/301 (59%), Gaps = 5/301 (1%) Query: 11 RCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 R SPLALA A ETR L H I I+ + T GD I ++ L +IGGKGLFT+EI Sbjct: 123 RDSPLALAQAHETREKLKAAHSELAEEGAIEIVIIKTTGDMILDKPLADIGGKGLFTKEI 182 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128 + L+ G ID AVHS KD+PT L +G + LPRED+RD FI TA SL +L SV+G Sbjct: 183 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPAGSVVG 242 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188 ++SLRR++ +L + V++FRG ++TRL KL A LLA AG++RL + + Sbjct: 243 SASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLNMAENATAV 302 Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248 L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FLA LDG+C++ I Sbjct: 303 LSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVACEREFLAVLDGNCRTPI 362 Query: 249 AGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFISNKNVF 305 A +A + F G++ + DG E +R+G D + +G+DA ++ + F Sbjct: 363 AAYAYRDEDGNCSFRGLLASPDGSKVFETTRSGPYSFDDMVELGKDAGHELKAKAGPGFF 422 Query: 306 N 306 + Sbjct: 423 D 423 >gi|312964492|gb|ADR30032.1| porphobilinogen deaminase [Ovis aries] Length = 350 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 105/338 (31%), Positives = 160/338 (47%), Gaps = 35/338 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K Sbjct: 6 KMRVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE D + H ++L Sbjct: 64 SLFTKELEHALERNEVDLVVHSLKDLPTVLPPGFTIGAVCKRESPYDAVVFHPKFVGKTL 123 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177 + L SV+GTSSLRR A L R + + RG + TRL KL+ + AI+LA AG++ Sbjct: 124 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFRNIRGNLNTRLRKLDELQEFSAIILAAAGLQ 183 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ER+FL Sbjct: 184 RMGWQNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERSFL 243 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284 L+G C +A K LY G V + +G + + +G D Sbjct: 244 RHLEGGCSVPVAVHTAIKDGQLYLTGGVWSLNGAETMQDTMQTTIHVPVQHEDGPEDDPQ 303 Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 304 LVGITARNIPRQPQLAAENLGISLATLLLNKGAKNILD 341 >gi|254498735|ref|ZP_05111451.1| porphobilinogen deaminase HemC [Legionella drancourtii LLAP12] gi|254352063|gb|EET10882.1| porphobilinogen deaminase HemC [Legionella drancourtii LLAP12] Length = 309 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 102/306 (33%), Positives = 157/306 (51%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR SPLAL A R L+ + P + ++P++T GD+ L +GG Sbjct: 1 MNSRIIHIATRQSPLALWQANHVRGLLLK--QWPMLQVELLPMTTSGDKFLKDKLLAVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ D AVHSAKDMP + GL ++A R++ DV +S L D Sbjct: 59 KGLFVKELEEALLDNRADIAVHSAKDMPAEFPAGLGLAAICKRDNPFDVLVSKHYAKLVD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++GT SLRR++ LL +R D+ + RG I TRL KL + + AI+LA AG++R+ Sbjct: 119 LPQQAIVGTGSLRRQSQLLAYRPDLCIKPLRGNINTRLAKLESGEYQAIILAAAGLERMG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E L+ + P+ QGA+ IE + + EL+ +N + V+ ER A L Sbjct: 179 FNHAISEQLSEQIMLPACAQGALAIECRTEDQEIHELLAGLNDPLSAVCVHTERQVNALL 238 Query: 241 DGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G+C +A F A + L+ +L DG + + G A + + AQ + Sbjct: 239 GGNCHVPLAVFCAPTTSNQLFLQAKILNQDGSKIIQNQQTGALDKATVLAYNCAQSLLTQ 298 Query: 300 SNKNVF 305 + Sbjct: 299 GAATLL 304 >gi|210621716|ref|ZP_03292765.1| hypothetical protein CLOHIR_00710 [Clostridium hiranonis DSM 13275] gi|210154598|gb|EEA85604.1| hypothetical protein CLOHIR_00710 [Clostridium hiranonis DSM 13275] Length = 299 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 106/296 (35%), Positives = 163/296 (55%), Gaps = 3/296 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+GTR S LAL L + K P + + TKGD+I + +L +IG KGLF Sbjct: 2 KIRVGTRGSNLALIQTNWAIDRLKE--KFPEVEFEVKIIKTKGDKILHLSLDKIGDKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-AL 123 +EIE +L+ GEID AVHS KDMP ++++GL+ +A RED RDV I + D + Sbjct: 60 VKEIESQLLEGEIDLAVHSMKDMPAEVVEGLKFAAVPKREDPRDVIILREGLNSFDELPI 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGT S RRK LLR R D++++ RG IETR++K+ + I+LA +G+ R E+ Sbjct: 120 GATIGTGSKRRKYQLLRKRPDLNIVPIRGNIETRISKIESENLDGIVLAASGVIRADLEE 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I E L ++ P+P QGA+ +E N+ + ++++ I E + + ER++LA +DGS Sbjct: 180 KITEFLPVDLMIPAPAQGALALEIRENDEELEKMIDAIKDEISQIQTDAERSYLAGIDGS 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 C + + G L GI DG+ S G+R + +G + A+ + Sbjct: 240 CHIPMGAYCEVDGEKLTLTGIFGDEDGEKITVASLEGDRDNPKELGSNLAKLVLKK 295 >gi|71275417|ref|ZP_00651703.1| Porphobilinogen deaminase [Xylella fastidiosa Dixon] gi|71898589|ref|ZP_00680760.1| Porphobilinogen deaminase [Xylella fastidiosa Ann-1] gi|170730394|ref|YP_001775827.1| porphobilinogen deaminase [Xylella fastidiosa M12] gi|238059006|sp|B0U2W8|HEM3_XYLFM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|71163717|gb|EAO13433.1| Porphobilinogen deaminase [Xylella fastidiosa Dixon] gi|71731713|gb|EAO33773.1| Porphobilinogen deaminase [Xylella fastidiosa Ann-1] gi|167965187|gb|ACA12197.1| Hydroxymethylbilane synthase [Xylella fastidiosa M12] Length = 305 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 103/301 (34%), Positives = 159/301 (52%), Gaps = 4/301 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LA+ + + L + P ++V++P+ST+GD I +R+L IGGKGLF Sbjct: 4 LRIATRKSLLAMRQSEYVAARLRML--CPDLDVVLVPMSTRGDEILDRSLAAIGGKGLFL 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ G+ DCAVHS KD+P L ++A L R+D D IS+ SL+ L + + Sbjct: 62 KELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 + TSSLRR+A L +R D+ + D RG + TRL KL+N AI+LA AG++RL E+ + Sbjct: 122 RVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNGDYDAIVLACAGLRRLGLEQRM 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L ++ P+PGQGAI +E+ + + L+ ++ T V ER L GSC Sbjct: 182 TARLAPPEWLPAPGQGAIAVESLTEDARIGTLLAGLDDLPTRQCVVAERTMNRALHGSCH 241 Query: 246 SAIAGFAYCKGSTLYFYGIVLAS-DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A + G+V DG + + +GR AQ + + Sbjct: 242 VPVGAYASYGVGGMRLQGLVGCVADG-RLVRAELCSAKDEGDMLGRAVAQCLLDAGAAEL 300 Query: 305 F 305 Sbjct: 301 L 301 >gi|317122098|ref|YP_004102101.1| porphobilinogen deaminase [Thermaerobacter marianensis DSM 12885] gi|315592078|gb|ADU51374.1| porphobilinogen deaminase [Thermaerobacter marianensis DSM 12885] Length = 335 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 109/322 (33%), Positives = 165/322 (51%), Gaps = 19/322 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR S LA A L H P + ++P++T GDR R L + Sbjct: 1 MTAPVVRIGTRASALARIQAQWVARELQRHH--PGLQVELVPVTTHGDRHRARPLYTLDT 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G F +E+E+ L +G ID AVHSAKD+PT+L +GL+++A+ RED D + +Q Sbjct: 59 PGAFVKELEEALRAGIIDLAVHSAKDVPTRLPEGLELAAFPQREDPGDALVLPRSQEGLG 118 Query: 121 L-----------------ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN 163 + +GTSSLRR+A L R D+ V RG ++TRL +L+ Sbjct: 119 PNGRDAGRGAGMTALELLPPGARVGTSSLRRQAWLRARRPDLKVEPARGNLDTRLRRLDE 178 Query: 164 NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223 A++LA AG++RL I + P+PGQGA+ +E ++ + LV+V++ Sbjct: 179 GAWDALVLAAAGLRRLGVGHRITAAIPPRALLPAPGQGALAVEIRASDDATRRLVQVLDR 238 Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283 + +V ERAFLAEL G+C+ + +A +G L G+V A DG + E G Sbjct: 239 PEVALAVRAERAFLAELGGTCRIPLGAWARLEGPRLRLAGMVAAPDGDPWLEEEVEGPAT 298 Query: 284 DAINIGRDAAQYIRFISNKNVF 305 D +GR+ A+ +R ++V Sbjct: 299 DPEAVGRELAERLRARGAESVL 320 >gi|315453028|ref|YP_004073298.1| porphobilinogen deaminase [Helicobacter felis ATCC 49179] gi|315132080|emb|CBY82708.1| porphobilinogen deaminase [Helicobacter felis ATCC 49179] Length = 305 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 100/301 (33%), Positives = 154/301 (51%), Gaps = 5/301 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IG+R S LAL A + L + I + TKGD+I + L +IGGKGLF Sbjct: 4 KLVIGSRGSALALWQARHVQELLKPL----GLESEIKIVKTKGDKILDVPLAKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E L+ G+ID AVHS KD+P L +GL ++ R + +D F+S+ +L+ L + Sbjct: 60 TKELEVLLLGGKIDLAVHSLKDVPVDLQEGLVLACVSARANPQDCFLSYKYPNLQALPPN 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGT+SLRR L R+D + RG ++ RL +L AI+LA AG++RL E Sbjct: 120 ARIGTTSLRRAMQLKALRTDTDPLSLRGNVQRRLERLQRGDFEAIILACAGVERLGLELP 179 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + L++E+ PS GQGA+ IE N+P ++ +N ++ ER F+ L G C Sbjct: 180 YRVPLSLEEMIPSMGQGALGIEMRANHPLLDQITS-LNDPNSALCCGLERDFVRALGGGC 238 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + + A +G + IV DGK F + + R A + + A + + Sbjct: 239 QVPLGVHARLQGEHIEMRAIVGLVDGKTFIKERASAPRDRAQELAHNLAHTFKQKGALEI 298 Query: 305 F 305 Sbjct: 299 L 299 >gi|149174132|ref|ZP_01852760.1| porphobilinogen deaminase [Planctomyces maris DSM 8797] gi|148847112|gb|EDL61447.1| porphobilinogen deaminase [Planctomyces maris DSM 8797] Length = 318 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 104/309 (33%), Positives = 160/309 (51%), Gaps = 7/309 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 EK+P RI TR S LAL A+ L I I+ ++++GDR L+E GG Sbjct: 6 EKRPLRIATRASNLALWQAYYVSDLLKKQSS--ERPIEIVHITSEGDRDLTSPLSEFGGL 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT----AQS 117 G+FT E++K ++ G D AVHS KD+PT+ GLQ++ R + DV I + Sbjct: 64 GVFTREVQKAVLDGRADLAVHSLKDLPTEQAPGLQLAGIPERGPLYDVLIFPQGSEAVEH 123 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 + DLA + IGT SLRR+A LL RSD+ +++ RG +ETRL KL+ + A+ LA AG+ Sbjct: 124 ITDLADDARIGTGSLRRRAQLLHQRSDLQMLEVRGNVETRLKKLDAGEYDALCLAEAGMV 183 Query: 178 RLKK-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 RL+ E+ +L + P+ GQGA+ IE ++ + L+ ++ T + ER+ Sbjct: 184 RLELLEQRASLLLQPPEVYPAVGQGALGIECRADDEETAALLAGLSDPPTQAATTAERSL 243 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 LA L C + I + L +VL++DG S G+ +A +IG A+ + Sbjct: 244 LAHLRAGCHAPIGSLSQTTVDQLTLEAVVLSADGVERICASVTGSLTEAADIGVKVAKAL 303 Query: 297 RFISNKNVF 305 + Sbjct: 304 LADGAGRLI 312 >gi|149041454|gb|EDL95295.1| hydroxymethylbilane synthase, isoform CRA_a [Rattus norvegicus] Length = 345 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 157/338 (46%), Gaps = 35/338 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + R+GTR S LA + L ++ P II +ST GD+I + L++IG K Sbjct: 1 MMRVIRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 59 SLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTL 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177 + L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++ Sbjct: 119 ETLPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAVAGLQ 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 179 RMGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 239 RHLEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQ 298 Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 299 LVGITARNIPRGAQLAAENLGISLASLLLNKGAKNILD 336 >gi|54298727|ref|YP_125096.1| porphobilinogen deaminase [Legionella pneumophila str. Paris] gi|61213295|sp|Q5X1F2|HEM3_LEGPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|53752512|emb|CAH13944.1| Porphobilinogen deaminase HemC [Legionella pneumophila str. Paris] Length = 309 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 104/306 (33%), Positives = 159/306 (51%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A R L+ + P +I ++P+ T GDR L GG Sbjct: 1 MSAKIIRIATRQSPLALWQANHVREMLVK--QWPNLSIELLPMITSGDRFLKDKLLSAGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL Sbjct: 59 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLSLAAICKRDNPFDALISPRFKSLDA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++IGTSSLRR++ LL + ++ + RG I TRL+KL + + AI+LA AG++R+ Sbjct: 119 LPKNAIIGTSSLRRQSQLLAYNPNLQIKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ + P+ QGA+CIE ++ + QEL+ +N + V+ ER A+L Sbjct: 179 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELIHGLNDPISALCVHTERRVNAKL 238 Query: 241 DGSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G+C A + L VL DG + + G +A I + + Sbjct: 239 GGNCHIPFAVYCTITAEKLLLLRAKVLNLDGSQMIDDEQQGKIEEAEIIADRCTESLMTK 298 Query: 300 SNKNVF 305 ++ Sbjct: 299 GAMSLL 304 >gi|323177814|gb|EFZ63398.1| porphobilinogen deaminase [Escherichia coli 1180] Length = 279 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 97/268 (36%), Positives = 148/268 (55%) Query: 38 IVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQI 97 + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +GL + Sbjct: 2 VELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGL 61 Query: 98 SAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETR 157 RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG + TR Sbjct: 62 VTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTR 121 Query: 158 LNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217 L+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + +EL Sbjct: 122 LSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTRTREL 181 Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277 + +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 182 LAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGE 241 Query: 278 RNGNRCDAINIGRDAAQYIRFISNKNVF 305 R G +A +G A+ + + + Sbjct: 242 RRGAPQNAEQMGISLAEELLNNGAREIL 269 >gi|78214363|ref|NP_037300.2| porphobilinogen deaminase [Rattus norvegicus] gi|56789892|gb|AAH88162.1| Hydroxymethylbilane synthase [Rattus norvegicus] Length = 361 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 157/338 (46%), Gaps = 35/338 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + R+GTR S LA + L ++ P II +ST GD+I + L++IG K Sbjct: 17 MMRVIRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 75 SLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177 + L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++ Sbjct: 135 ETLPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAVAGLQ 194 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 195 RMGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 254 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 255 RHLEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQ 314 Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 315 LVGITARNIPRGAQLAAENLGISLASLLLNKGAKNILD 352 >gi|2506505|sp|P19356|HEM3_RAT RecName: Full=Porphobilinogen deaminase; Short=PBG-D; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|1911164|emb|CAA72734.1| hemC [Rattus sp.] Length = 361 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 157/338 (46%), Gaps = 35/338 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + R+GTR S LA + L ++ P II +ST GD+I + L++IG K Sbjct: 17 MMRVIRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 75 SLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIK 177 + L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++ Sbjct: 135 ETLPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDEQLEFSAIILAVAGLQ 194 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 195 RMGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 254 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 255 RHLEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQ 314 Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 315 LVGITARNIPRGAQLAAENLGISLASLLLNKGAKNILD 352 >gi|114051169|ref|NP_001039672.1| porphobilinogen deaminase [Bos taurus] gi|109892198|sp|Q2KIN5|HEM3_BOVIN RecName: Full=Porphobilinogen deaminase; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS gi|86438293|gb|AAI12574.1| Hydroxymethylbilane synthase [Bos taurus] gi|296480113|gb|DAA22228.1| porphobilinogen deaminase [Bos taurus] Length = 361 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 105/338 (31%), Positives = 159/338 (47%), Gaps = 35/338 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE D + H ++L Sbjct: 75 SLFTKELEHALERNEVDLVVHSLKDLPTVLPPGFTIGAVCKRESPYDAVVFHPKFVGKTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177 + L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++ Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILATAGLQ 194 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ER+FL Sbjct: 195 RMGWQNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERSFL 254 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284 L+G C +A K LY G V + +G + + +G D Sbjct: 255 RHLEGGCSVPVAVHTAIKDGQLYLTGGVWSLNGAETMQDTMQTTIHVPVQHEDGPEDDPQ 314 Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 315 LVGITARNIPRQPQLAAENLGISLATLLLNKGAKNILD 352 >gi|303326737|ref|ZP_07357179.1| hydroxymethylbilane synthase [Desulfovibrio sp. 3_1_syn3] gi|302862725|gb|EFL85657.1| hydroxymethylbilane synthase [Desulfovibrio sp. 3_1_syn3] Length = 310 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 158/306 (51%), Gaps = 3/306 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K I TR S LAL A +S L + P + + + TKGD I + L+++GGK Sbjct: 1 MRKHLVIATRGSRLALWQAEHVKSRLEA--QDPGLTVSLNVIKTKGDIILDVPLSKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +EIE+ L+ G D AVHS KD+P L +GL + RE D F+S L Sbjct: 59 GLFVKEIEEALLDGRADLAVHSIKDVPMVLPEGLILGCVPQREACTDCFLSVHYADPDAL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSSLRR+A LL R D+ + RG ++TRL KL N + AI+LA AG+ RL Sbjct: 119 PQKAHVGTSSLRRQAQLLSMRPDLRISSLRGNVDTRLRKLQNGEYDAIILASAGLNRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 L+ E F P+ GQGA+ IE +N L+ + + T V+ ER FLA L+ Sbjct: 179 SAPYMAPLDPERFLPAVGQGALGIECREDNYDLLVLLASLENRATRVCVDAERGFLAGLE 238 Query: 242 GSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAG A T+ G+V DG + +NGN DA +G + A + Sbjct: 239 GGCQVPIAGHARLVDEETVSLKGLVAEVDGSLILRGEKNGNAADARALGLELAGELLNKG 298 Query: 301 NKNVFN 306 + + Sbjct: 299 GRAILE 304 >gi|52842939|ref|YP_096738.1| porphobilinogen deaminase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52630050|gb|AAU28791.1| porphobilinogen deaminase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 321 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 105/306 (34%), Positives = 159/306 (51%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A R L+ + P +I ++P+ T GDR L GG Sbjct: 13 MSAKIIRIATRQSPLALWQANHVREMLVK--QWPNLSIELLPMITSGDRFLKDKLLSAGG 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL Sbjct: 71 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLLLTAICKRDNPFDALISPQFKSLAA 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++IGTSSLRR++ LL + ++ + RG I TRL+KL + + AI+LA AG++R+ Sbjct: 131 LPKNAIIGTSSLRRQSQLLAYNPNLQIKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ + P+ QGA+CIE ++ + QELV +N + V+ ER A+L Sbjct: 191 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELVHGLNDPISALCVHTERRVNAKL 250 Query: 241 DGSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G+C A + L VL DG + + G +A I + + Sbjct: 251 GGNCHIPFAVYCTITEEKLLLLRAKVLNMDGSQMIDDEQQGKIAEAEVIADRCTESLMTK 310 Query: 300 SNKNVF 305 ++ Sbjct: 311 GAMSLL 316 >gi|126326558|ref|XP_001370512.1| PREDICTED: similar to Porphobilinogen deaminase (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) (PBG-D) [Monodelphis domestica] Length = 344 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 156/337 (46%), Gaps = 35/337 (10%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LA + L D++ P II +ST GD+I + L++IG K Sbjct: 1 MRVIRVGTRKSQLARIQTDSVVAMLKDIY--PGLQFEIIAMSTTGDKILDTALSKIGEKS 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL- 121 LFT+E+E L E+D VHS KD+PT L I A RE D I H + + L Sbjct: 59 LFTKELEYALEKNEVDLVVHSLKDLPTVLPPAFTIGAVCKRESPYDAVIFHPKYTGQTLG 118 Query: 122 --ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKR 178 SVIGTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R Sbjct: 119 TLPERSVIGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILAAAGLQR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + + ++L E+ + GQGA+ +E + + +LV+V++ +T ERAFL Sbjct: 179 MGWQSRVGQLLYPEECLYAVGQGALGVEVRAKDQEVLDLVQVLHDPETLLRCIAERAFLR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 239 HLEGGCSVPVAVDTTLKDGQLYLTGGVWSLDGSDSLKETMQTTINDSAQHEDGPEDDVQR 298 Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + +N+ + Sbjct: 299 VGITAQHISQGVQRAAENLGISLANLLLNKGARNILD 335 >gi|158421885|ref|YP_001523177.1| porphobilinogen deaminase [Azorhizobium caulinodans ORS 571] gi|158328774|dbj|BAF86259.1| porphobilinogen deaminase [Azorhizobium caulinodans ORS 571] Length = 313 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 121/291 (41%), Positives = 161/291 (55%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR SPLAL A R +L P +I I + T GD I +R L+E GGKGLFT+E Sbjct: 14 IGTRGSPLALWQAHAVRDALAAALARPVESISITVIRTSGDSIQDRALSEAGGKGLFTKE 73 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE++L+ G ID AVHSAKDM T L GL +S +LPR D+RD I +SL DL + I Sbjct: 74 IEEQLLDGRIDLAVHSAKDMATALPDGLFLSGFLPRADVRDALILREGKSLADLPAGARI 133 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GT+SLRR+A L R R D+ V RG + TRL K+ LLA AG+ RL Sbjct: 134 GTASLRREAQLRRLRPDLDVSLLRGNVHTRLAKVREGTFDGTLLALAGLTRLGLAHEASA 193 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 +L+ + F P+ GQGA+ IE+ V + + I T ++ ERA L LDGSC++ Sbjct: 194 VLDTDAFLPAVGQGAVAIESRVGDEATNGAIAAIACRATGIALAAERALLTALDGSCRTP 253 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 I G A +G + G++L+ DG+ E DA +G D +R Sbjct: 254 IGGLATVEGDMVRLRGLILSPDGRDAAEADETAPVSDAARLGADMGARLRA 304 >gi|330813348|ref|YP_004357587.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. IMCC9063] gi|327486443|gb|AEA80848.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. IMCC9063] Length = 321 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 111/304 (36%), Positives = 176/304 (57%), Gaps = 2/304 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLM-DVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ IG+R S L+LA + + L+ + P I + + T GD+ L +GGK Sbjct: 4 KQKLIIGSRGSRLSLAQSEHFKDELLLANPDLRPDQIELKVIKTSGDKFKTENLASMGGK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +EIE++L+ IDCAVHS KD+PT + L+++A+L R+D RD FIS A+S + L Sbjct: 64 GLFVKEIEQELLENNIDCAVHSLKDVPTFGVPSLKLAAFLKRKDERDAFISPVAKSFETL 123 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 S +GTSS+RR A L + RSD++++ RG I+TR+ K+ +I+LAYAG+KRL Sbjct: 124 KPGSTVGTSSVRRIAQLKKLRSDLNIVSMRGNIDTRIEKVKEGIYDSIVLAYAGLKRLGF 183 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + EIL+ E P+ GQG + I+ N+ + +L+K +N ++T V+ ER+FL ++ Sbjct: 184 HTHVSEILDKEKMLPAAGQGVVTIQCRSNDGELIKLLKSVNDKETEIIVSAERSFLHRVN 243 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G+C + +A A ++ +L+ DGK R G A++IG D A+ I + Sbjct: 244 GACDTPVAVNAVLNDDGEVFIQAEILSLDGKKVFNAHRTGISEKAVSIGLDVAEEILDKA 303 Query: 301 NKNV 304 + Sbjct: 304 GHDF 307 >gi|311031438|ref|ZP_07709528.1| porphobilinogen deaminase [Bacillus sp. m3-13] Length = 310 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 114/306 (37%), Positives = 167/306 (54%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + P + + + TKGD+I + TL+++GGKG Sbjct: 1 MRKIIVGSRRSKLALTQTNWVIDQLKALGA--PFDFEVKEIVTKGDQILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ ++ +ID AVHS KDMP L +GL I RED RD FIS DL Sbjct: 59 LFVKEIEQAMLDKDIDMAVHSMKDMPAVLPEGLTIGCIPFREDHRDAFISKDHVKFADLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S++GTSSLRR A LL R D+ + RG I+TRL KL N AI+LA AG+ R+ Sbjct: 119 SGSIVGTSSLRRGAQLLAKRPDLEIKWIRGNIDTRLAKLQNEDYDAIILAAAGLARMGWS 178 Query: 183 -KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 V+ E L+ + P+ GQGA+ IE ++ E++K+ T +V ERAFL +++ Sbjct: 179 KDVVTEFLDEDLCLPAVGQGALSIECREDDADLLEVLKLFTDSVTEKAVIAERAFLHKME 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C+ IAGFA + L +V A DG + ++ G D + +G +AA+ + Sbjct: 239 GGCQVPIAGFASVGQDDNLTLTVLVGAPDGSVLYKERITGT--DPVKVGLEAAESLTAQG 296 Query: 301 NKNVFN 306 K + + Sbjct: 297 GKKIID 302 >gi|134094241|ref|YP_001099316.1| porphobilinogen deaminase [Herminiimonas arsenicoxydans] gi|133738144|emb|CAL61189.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Herminiimonas arsenicoxydans] Length = 317 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 110/303 (36%), Positives = 165/303 (54%), Gaps = 2/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LA+ A R L ++ P I I+ ++T+GD+I +RTL+++GGKGL Sbjct: 7 KKLVIASRESRLAMWQAEHVREKLALLY--PQCAIEILGMTTRGDQILDRTLSKVGGKGL 64 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E + D AVHS KD+P L +G ++A L RED RD F+S+ SL DL Sbjct: 65 FVKELEVAIAERRADLAVHSLKDVPMSLPEGFALAAVLEREDPRDAFVSNDYASLDDLPD 124 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+AL+ + + RG ++TRL KL+ + AI+LA AG+KRL + Sbjct: 125 GAIVGTSSLRRQALIAARYPKLVIRPLRGNLDTRLGKLDKGEYAAIILAAAGLKRLGMPQ 184 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ +L+ E P+PGQGA+ IE H + QE + +NHE T +V ER GS Sbjct: 185 RIRAVLDPEQSLPAPGQGAMGIEIHADRADLQEWLAPLNHEATAQAVTAERTVSRNFGGS 244 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ +A FA + T+ ++ DGK NG +G A+ + Sbjct: 245 CQIPLAAFATIENGTMRLRAMIATPDGKRVARADLNGAAHAPEALGGQIAELLHQQEANA 304 Query: 304 VFN 306 + Sbjct: 305 ILE 307 >gi|289642295|ref|ZP_06474444.1| porphobilinogen deaminase [Frankia symbiont of Datisca glomerata] gi|289507930|gb|EFD28880.1| porphobilinogen deaminase [Frankia symbiont of Datisca glomerata] Length = 313 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 104/310 (33%), Positives = 159/310 (51%), Gaps = 7/310 (2%) Query: 1 ME-KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + RIGTR SP+ALA A R+ L ++ P I+P++T GDR T L+ +G Sbjct: 3 MSASRLIRIGTRSSPMALAQAERVRAELTALN--PDLTAEIVPITTSGDRWTG-PLSTLG 59 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKG--LQISAYLPREDIRDVFISHTAQS 117 GKG FT+E+++ L++G D AVH KD+P +AYLPR+DIRD I ++ Sbjct: 60 GKGAFTKEVDEALLAGRADLAVHCMKDVPGDRPVPAGTVFAAYLPRDDIRDALIHPGGRT 119 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L + +GTS++RR A L + + + RG TRL +L++ A A+LLA +G++ Sbjct: 120 LDQLPAGTRVGTSAVRRIAQLAQSHPHLETVPIRGNANTRLARLDDGAADALLLAVSGLE 179 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + I EIL+ E P G G + ++ ++ +LV ++ D V ER L Sbjct: 180 RIGQAGRITEILSAETMCPPIGAGVLGLQCREDDTDTAQLVAGMDDIDARRQVTAERMLL 239 Query: 238 AELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L G C S IAG A+ + L V + DGK + G D +G A + Sbjct: 240 HVLQGHCNSPIAGHAHTEPDGRLSLRAKVFSPDGKTVLDAHEWGPGTDPTTLGASVAVAL 299 Query: 297 RFISNKNVFN 306 +++ N Sbjct: 300 LRQGAQDLLN 309 >gi|61213316|sp|Q5ZRY6|HEM3_LEGPH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 309 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 105/306 (34%), Positives = 159/306 (51%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A R L+ + P +I ++P+ T GDR L GG Sbjct: 1 MSAKIIRIATRQSPLALWQANHVREMLVK--QWPNLSIELLPMITSGDRFLKDKLLSAGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL Sbjct: 59 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLLLTAICKRDNPFDALISPQFKSLAA 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++IGTSSLRR++ LL + ++ + RG I TRL+KL + + AI+LA AG++R+ Sbjct: 119 LPKNAIIGTSSLRRQSQLLAYNPNLQIKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ + P+ QGA+CIE ++ + QELV +N + V+ ER A+L Sbjct: 179 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELVHGLNDPISALCVHTERRVNAKL 238 Query: 241 DGSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G+C A + L VL DG + + G +A I + + Sbjct: 239 GGNCHIPFAVYCTITEEKLLLLRAKVLNMDGSQMIDDEQQGKIAEAEVIADRCTESLMTK 298 Query: 300 SNKNVF 305 ++ Sbjct: 299 GAMSLL 304 >gi|110636914|ref|YP_677121.1| hydroxymethylbilane synthase [Cytophaga hutchinsonii ATCC 33406] gi|123163848|sp|Q11XT5|HEM3_CYTH3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|110279595|gb|ABG57781.1| hydroxymethylbilane synthase [Cytophaga hutchinsonii ATCC 33406] Length = 312 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 108/306 (35%), Positives = 161/306 (52%), Gaps = 6/306 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K RIGTR S LAL A + L P I+ + T GD+I +++L++IG K Sbjct: 1 MNKTVRIGTRGSKLALWQAEHVAACLQTKGLEP----QIVIIDTTGDKILDQSLSKIGSK 56 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFTEE+E++L +G ID AVHSAKD+ T L G+ I A RE + DV +SH Sbjct: 57 GLFTEELEEQLHAGTIDIAVHSAKDLQTHLKGGMYILAITERELVNDVLVSHKPIDTLKN 116 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +IGTSS RR+ALL ++ ++D RG ++TR+ K+ A+LLAYAG+ R+ Sbjct: 117 NPDLIIGTSSTRRRALLRKFYPQAKMVDMRGNLQTRIRKMEEGACDAMLLAYAGMHRMGY 176 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE--LVKVINHEDTWDSVNCERAFLAE 239 + +IKE L++E+F P+ GQG + IE K + + V+N T +V+ ERAFL Sbjct: 177 DSLIKEKLSLEEFIPAAGQGTLAIEAASTLDKEKAAVIRAVLNDAATETAVSAERAFLRT 236 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C + A + + G +++ DG + DA G + A + Sbjct: 237 LEGGCSIPVFALAVERDTDYLLTGGIVSLDGTKYLRKEIRFTAADAEQRGVELATVLLKD 296 Query: 300 SNKNVF 305 + Sbjct: 297 GADEIL 302 >gi|194290490|ref|YP_002006397.1| porphobilinogen deaminase [Cupriavidus taiwanensis LMG 19424] gi|193224325|emb|CAQ70336.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Cupriavidus taiwanensis LMG 19424] Length = 336 Score = 233 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 163/305 (53%), Gaps = 5/305 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + I +R S LAL A R++L + P ++ I+ ++T+GD+I +RTL+++GGKGL Sbjct: 19 QKLVIASRESRLALWQAEHVRAALQQYY--PACDVSILGMTTRGDQILDRTLSKVGGKGL 76 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E + G D AVHS KD+P +L G ++A + RED RD +S SL ++ Sbjct: 77 FVKELEFAMDEGRADLAVHSLKDVPMELPPGFTLAAVMEREDPRDALVSSAYASLDEMPP 136 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR+A L + V RG ++TRL KL+ + AI+LA AG+KRL Sbjct: 137 GTVVGTSSLRREAALRSRYPHLVVKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGD 196 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ ++ +E P+ GQGA+ IET P+ E + +NH+ T +V ERA L GS Sbjct: 197 RIRALIPLEASLPAAGQGALGIETLSTRPELAEWLAPLNHQPTALAVTAERAVSRRLGGS 256 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKI---FHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C+ +A A G L V DG + A +G+ A + Sbjct: 257 CQVPLAAHARWDGDQLRLEAFVALPDGSRAIRAAAAGPAADLAAAEALGQACAGDLLAQG 316 Query: 301 NKNVF 305 +++ Sbjct: 317 AESIL 321 >gi|148358525|ref|YP_001249732.1| porphobilinogen deaminase [Legionella pneumophila str. Corby] gi|148280298|gb|ABQ54386.1| porphobilinogen deaminase [Legionella pneumophila str. Corby] Length = 321 Score = 233 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 104/306 (33%), Positives = 159/306 (51%), Gaps = 3/306 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A R L+ + P +I ++P+ T GDR L GG Sbjct: 13 MSAKIIRIATRQSPLALWQANHVRKMLVK--QWPNLSIELLPMITSGDRFLKDKLLSAGG 70 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L+ D AVHS KDMP +L GL ++A R++ D IS +SL Sbjct: 71 KGLFVKELEEALLDKRADLAVHSTKDMPAQLPDGLLLAAICKRDNPFDALISPQFKSLDA 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++IGTSSLRR++ LL + ++ + RG I TRL+KL + + AI+LA AG++R+ Sbjct: 131 LPKNAIIGTSSLRRQSQLLAYNPNLQIKTLRGNIHTRLSKLESGEYQAIILAAAGLERMG 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I +++ + P+ QGA+CIE ++ + QEL+ +N + V+ ER A+L Sbjct: 191 LAHHITQLIPDDIMLPTCAQGALCIECRTDDLEIQELIHGLNDPISALCVHTERRVNAKL 250 Query: 241 DGSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G+C A + L VL DG + + G +A I + + Sbjct: 251 GGNCHIPFAVYCTITEEKRLLLRAKVLNMDGSQMIDDEQQGKIAEAEVIADRCTESLMTK 310 Query: 300 SNKNVF 305 ++ Sbjct: 311 GAMSLL 316 >gi|94264595|ref|ZP_01288379.1| Porphobilinogen deaminase [delta proteobacterium MLMS-1] gi|93454949|gb|EAT05186.1| Porphobilinogen deaminase [delta proteobacterium MLMS-1] Length = 311 Score = 233 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 108/285 (37%), Positives = 161/285 (56%), Gaps = 2/285 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR S LALA A + + H P + ++ + TKGD+I + L ++GGKGL Sbjct: 3 NNIRIGTRASMLALAQANWIKGRIEAQH--PQCRVELVKIITKGDKIVDVPLAKVGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ ++ GE+D AVHS KD+P +L +GL I RE+ D F+S+ Q+++ L Sbjct: 61 FVKEIEEAMLRGEVDIAVHSMKDVPAELPQGLHIGIITQRENPFDAFVSNLYQNIEALPT 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSSLRRK+ L R D+++ D RG ++TRL KL+ + I+LA AG+ RL Sbjct: 121 GARVGTSSLRRKSQLAALRPDLTIEDLRGNLDTRLRKLDEGQYDGIILAAAGLNRLDLAH 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 E P+ QGA+ IE + E++ ++H T +V ERA+L L+G Sbjct: 181 RATFYFQAEQMLPAVAQGAVGIELRRADADLLEMLSFMDHRATTLAVKAERAYLKRLEGG 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 C+ +AGFA G L +V A DG +VS++G +A I Sbjct: 241 CQVPLAGFATLDGDRLQLDTLVAAIDGSRLLKVSKSGPAEEAEEI 285 >gi|15807343|ref|NP_296073.1| porphobilinogen deaminase [Deinococcus radiodurans R1] gi|11386849|sp|Q9RRY0|HEM3_DEIRA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|6460165|gb|AAF11898.1|AE002066_2 porphobilinogen deaminase [Deinococcus radiodurans R1] Length = 309 Score = 233 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 107/307 (34%), Positives = 158/307 (51%), Gaps = 5/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR--TLTEIGG 60 + +GTR S LALA + L + + P + I +STKGDR L + G Sbjct: 1 MRTVTVGTRGSTLALAQTRWVVARLKE--EWPETDFRIQTISTKGDRNRESLEQLAQKGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLK 119 KG + +EIE+ L++ +ID AVHS KD+PT+ +GL+IS+ R D RD I + L Sbjct: 59 KGFWVKEIEEALLAKKIDIAVHSLKDLPTEQPEGLEISSIPKRVDGRDALIGREGMKKLA 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L + IGTSS+RRKA L +R D+ V D RG I+TRL L + + AI+LA AG+ R Sbjct: 119 ELPEGARIGTSSVRRKAFLRAYRPDLIVKDLRGNIDTRLAALGSGEYDAIILAAAGLIRT 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 ++ I E ++ + P+PGQGA+ +ET + E+ I+ T D + ER FLA Sbjct: 179 EQRHRIDEFVDPDILLPAPGQGALALETRTEDDLTIEVAYAIHDHATDDRITAEREFLAG 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L C + + A K L G V A DG + G+ + +IG + A + Sbjct: 239 LGAGCMAPVGAHAVIKNGLLTLEGWVGALDGTQVIRATSQGDVAECADIGAELAADMLER 298 Query: 300 SNKNVFN 306 + Sbjct: 299 GAAELIE 305 >gi|291412990|ref|XP_002722769.1| PREDICTED: hydroxymethylbilane synthase [Oryctolagus cuniculus] Length = 365 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 106/337 (31%), Positives = 157/337 (46%), Gaps = 35/337 (10%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K Sbjct: 22 MRVIRVGTRKSQLARIQTDSVVATLKTLY--PGLRFEIIAMSTTGDKILDTALSKIGEKS 79 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 LFT+E+E L E+D VHS KD+PT L G + A RE+ D + H ++L Sbjct: 80 LFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTVGAICKRENPCDAVVFHPKFVGKTLA 139 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKR 178 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R Sbjct: 140 TLPERSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDEQQEFSAIILAVAGLQR 199 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 200 MGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLK 259 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 260 HLEGGCSVPVAVHTAMKDGQLYMTGGVWSLDGSDTMQETMQASIQVPAQHEDGPEDDPQL 319 Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 320 VGITARNIPRGPQLAAENLGISLANLLLNKGAKNILD 356 >gi|242373962|ref|ZP_04819536.1| hydroxymethylbilane synthase [Staphylococcus epidermidis M23864:W1] gi|242348316|gb|EES39918.1| hydroxymethylbilane synthase [Staphylococcus epidermidis M23864:W1] Length = 308 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 100/305 (32%), Positives = 176/305 (57%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L ++ P +I I + TKGD+I ++ L+++GGKG Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDELKEIE--PDLDIEIKEIVTKGDKIVDKQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L + +ID A+HS KD+P+ + +GL + RE D +IS L +L Sbjct: 59 LFVKEIQNELFNKDIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHTPLSELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S++GTSSLRR A +L + + RG I+TRLNKL AI+LA AG++R+ Sbjct: 119 EGSIVGTSSLRRGAQILSKYPHLEIKWIRGNIDTRLNKLETEDYDAIILAAAGLRRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ L+ + P+ GQGA+ IE ++ + +L+K +++ + V ER FL+E+D Sbjct: 179 DDIVTTYLDKDILLPAIGQGALGIECRSDDEELLDLLKKVHNHEVAQCVTAERTFLSEMD 238 Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ I G+A G+ + F G+++ DGK +E + G+ + + +G++ ++ ++ Sbjct: 239 GSCQVPIGGYATIDGNSQIEFTGLIMTPDGKERYEHTARGH--NPVELGQEVSRVLKEQG 296 Query: 301 NKNVF 305 + Sbjct: 297 AYEII 301 >gi|171319139|ref|ZP_02908260.1| porphobilinogen deaminase [Burkholderia ambifaria MEX-5] gi|171095659|gb|EDT40618.1| porphobilinogen deaminase [Burkholderia ambifaria MEX-5] Length = 328 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 169/305 (55%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 71 VKELENALADGRADLAVHSLKDVPMALPDGFALTAIMEREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E Sbjct: 131 AVVGTSSLRREAMLRARYPHLDVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ ++++ED PP+ GQGA+ IE + + ++ T +V ER L GSC Sbjct: 191 IRTLIDVEDSPPAAGQGALGIEIAAHRTDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + +A A + LY G V +DG+ G DA+ +GR + + Sbjct: 251 EVPLAAHAVWRAGELYLTGRVSTTDGQRVLTAEECGAVMTVADALALGRAVSDELEAQGA 310 Query: 302 KNVFN 306 +++ N Sbjct: 311 RDIVN 315 >gi|168703144|ref|ZP_02735421.1| porphobilinogen deaminase [Gemmata obscuriglobus UQM 2246] Length = 299 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 102/298 (34%), Positives = 155/298 (52%), Gaps = 2/298 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P ++GTR SPLAL A L V + P + ++ + T GDR L+ +GG G+F Sbjct: 4 PLKLGTRGSPLALWQANYIAELLRPV--VAPRPVELVLIETHGDRDQASALSAMGGFGVF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+ I+ L+ G D AVHS KD+PT L+++A PR D F+S + DL Sbjct: 62 TKAIQNALLDGRADVAVHSLKDLPTIPEPRLELAAVPPRGPTGDAFVSRKHKRFDDLHPG 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR+A +L R D+ ++D RG ++TRL KL++ AI+LA AG+ RL Sbjct: 122 ATVGTSSLRRRAQVLNRRPDLKLLDLRGNVDTRLRKLDDLGLDAIVLAEAGLARLGLADR 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I EIL+ P+ GQGAI +E ++ + + ++ + E T+ V ERA L L G C Sbjct: 182 ITEILDPSWMLPAVGQGAIGLECRSDDGETKLVLAQVRCESTFARVQAERAMLYALGGGC 241 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 I + L G VL+ DG+ + G +++G++ A + Sbjct: 242 LVPIGATSKVLDGVLTVRGAVLSPDGRRRIVGTHEGLMRAPLSVGQELAGILLAEGAD 299 >gi|223044144|ref|ZP_03614183.1| porphobilinogen deaminase [Staphylococcus capitis SK14] gi|222442538|gb|EEE48644.1| porphobilinogen deaminase [Staphylococcus capitis SK14] Length = 309 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 173/305 (56%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L V P +I I + TKGD+I ++ L+++GGKG Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDKLKKV--DPDLDIEIKEIVTKGDQIVDKQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L + EID A+HS KD+P+ + +GL + RE D +IS L +L Sbjct: 59 LFVKEIQNELFNKEIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHTPLSELT 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ Sbjct: 119 EGSIVGTSSLRRGAQILSKYPHLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ L+ + P+ GQGA+ IE ++ + EL+K ++++D V ER FL+E+D Sbjct: 179 DDIVTTYLDKDVLLPAIGQGALGIECRSDDKELLELLKKVHNQDVAQCVTAERTFLSEMD 238 Query: 242 GSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ I G+A G + F G+++ DGK +E + G D + +G++ ++ ++ Sbjct: 239 GSCQVPIGGYATIDGDKQIEFTGLIMTPDGKERYEHTAKG--LDPVELGQEVSRVLKEQG 296 Query: 301 NKNVF 305 + Sbjct: 297 AYEII 301 >gi|93004929|ref|YP_579366.1| porphobilinogen deaminase [Psychrobacter cryohalolentis K5] gi|92392607|gb|ABE73882.1| hydroxymethylbilane synthase [Psychrobacter cryohalolentis K5] Length = 345 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 102/330 (30%), Positives = 165/330 (50%), Gaps = 31/330 (9%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR SPLAL A R+ L+ ++ P I ++ + TKGD+I + L +IGGKGLF Sbjct: 11 TLNIATRQSPLALWQAEHIRNRLLALY--PEMTINLLKIVTKGDKILDTPLAKIGGKGLF 68 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E+ L + D AVHS KD+P L +GL + Y R D F+S+T S+ +L Sbjct: 69 VKELEQALYDKQADIAVHSLKDVPMDLPEGLTLGVYCKRASPTDAFVSNTYHSIAELPQG 128 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GT+SLRR+ + +R D+ + RG + TRL+KL+ + AI+LA +G+KR++ + Sbjct: 129 AVVGTASLRRQCQIKAYRPDLQIKTLRGNVGTRLSKLDAGEYDAIILATSGLKRIELDAR 188 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ L+I P+ GQGA+ IE ++ +L+ +N + + ERA L G C Sbjct: 189 IRSELDINICLPAVGQGALAIECREDDADVLKLLAPLNDDKARIRLIAERALNRHLQGGC 248 Query: 245 KSAIAGFAYCKG---------------------STLYFYGIVLASDGKIFH----EVSRN 279 + IA +A + TL+ G V DG + Sbjct: 249 QVPIAAYAVLQKADALAADNDSNDNDNGNNDAGDTLWLRGRVGQEDGSELLKVDKRQTLT 308 Query: 280 GNRCD----AINIGRDAAQYIRFISNKNVF 305 G++ + A +G + A+ + + Sbjct: 309 GSQAEQEAQANQLGIEVAEMLLQAGAGEIL 338 >gi|323525182|ref|YP_004227335.1| porphobilinogen deaminase [Burkholderia sp. CCGE1001] gi|323382184|gb|ADX54275.1| porphobilinogen deaminase [Burkholderia sp. CCGE1001] Length = 349 Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats. Identities = 105/303 (34%), Positives = 163/303 (53%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 12 TLVIASRESRLAMWQAEHVRCALHKLY--PSCDVKILGMTTRGDQILDRTLSKVGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G ++ + RED RD +S+ SL L Sbjct: 70 VKELEAALADGRADLAVHSLKDVPMELPAGFALATIMEREDPRDALVSNDYDSLAALPAG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL + Sbjct: 130 AVVGTSSLRREAMLRMRYPHLEVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAER 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+ ED P+ GQGA+ IE + + ++HE T +V ER L GSC Sbjct: 190 IRALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHEHTAAAVEAERMVSRALGGSC 249 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISN 301 + +A +A L+ G+V DG+ + A+ +GR+ A + Sbjct: 250 EVPLAAYATWHDGALHLRGVVATPDGQRVLSAHASAPAPTTERAVALGREVASALEQQGA 309 Query: 302 KNV 304 + Sbjct: 310 MEI 312 >gi|56856|emb|CAA29984.1| unnamed protein product [Rattus norvegicus] Length = 344 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 155/337 (45%), Gaps = 35/337 (10%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LA + L ++ P II +ST GD+I + L++IG K Sbjct: 1 MRVIRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEKS 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + ++L+ Sbjct: 59 LFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFEGKFIGKTLE 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKR 178 L S +GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R Sbjct: 119 TLPEKSAVGTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDEQLEFSAIILAVAGLQR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + + +IL+ E+ + GQGA+ +E + +LV V++ +T ER FL Sbjct: 179 MGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERDFLR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 239 HLEGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQL 298 Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 299 VGITARNIPRGAQLAAENLGISLASLLLNKGAKNILD 335 >gi|319943887|ref|ZP_08018168.1| hydroxymethylbilane synthase [Lautropia mirabilis ATCC 51599] gi|319743120|gb|EFV95526.1| hydroxymethylbilane synthase [Lautropia mirabilis ATCC 51599] Length = 315 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 102/302 (33%), Positives = 152/302 (50%), Gaps = 7/302 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RI TR S LAL A L H ++ ++T+GD+I +R L EIGGKGLF Sbjct: 9 PLRIATRESRLALWQANHVAELLRARHPAAGVA--LLGMTTRGDQILDRPLAEIGGKGLF 66 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E L G + AVHS KD+P L +G ++A + R D RD F+S SL +L Sbjct: 67 TKELEVALFDGRAELAVHSLKDVPMDLPEGFDLAAVMTRADARDAFVSTRYASLDELPPD 126 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR A L + RG ++TRL KL+ + AI+LA AG+ RL Sbjct: 127 AVVGTSSLRRAAQLQARHPGFRIQPLRGNLDTRLGKLDAGQYDAIVLAAAGLTRLGLADR 186 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I++ L +++ P+PGQG + IE + ++ + +N + ERA +L G+C Sbjct: 187 IRQYLPLDEMLPAPGQGMLGIEIRADRDDVRQALAFLNDPEAARIAAAERAVSRQLGGNC 246 Query: 245 KSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN---IGRDAAQYIRFIS 300 K+ +A A + ++ DG V+R G D +G A ++ Sbjct: 247 KTPLAAHARFTASGQMQLDALLADDDG-RIARVTRVGKVADPKEARVMGEAVAAELKAQL 305 Query: 301 NK 302 Sbjct: 306 AA 307 >gi|242242934|ref|ZP_04797379.1| hydroxymethylbilane synthase [Staphylococcus epidermidis W23144] gi|242233535|gb|EES35847.1| hydroxymethylbilane synthase [Staphylococcus epidermidis W23144] Length = 308 Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats. Identities = 101/305 (33%), Positives = 174/305 (57%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L P +I I + TKGD+I ++ L+++GGKG Sbjct: 1 MRKLIVGSRRSKLALTQSQQFIDKLK--FIDPSLDIEIKEIVTKGDKIVDKQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L + EID A+HS KD+P+ + GL + RE D +I+ L++L+ Sbjct: 59 LFVKEIQNELFNKEIDMAIHSLKDVPSIIPDGLTLGCIPDREIPFDAYIAKNHIPLEELS 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ Sbjct: 119 EGSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ L+ + P+ GQGA+ IE ++ + +L+ +++ D V ER FL+E+D Sbjct: 179 DNIVTTYLDRDVLLPAIGQGALGIECRSDDKELLDLLAKVHNHDVAQCVTAERTFLSEMD 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ I G+A + + + F G++++ DGK +E + G+ D + +G + +Q ++ Sbjct: 239 GSCQVPIGGYATIVQDNQIEFTGLIMSPDGKERYEHTTLGS--DPVQLGIEVSQVLKKQG 296 Query: 301 NKNVF 305 ++ Sbjct: 297 AYDII 301 >gi|229543656|ref|ZP_04432716.1| porphobilinogen deaminase [Bacillus coagulans 36D1] gi|229328076|gb|EEN93751.1| porphobilinogen deaminase [Bacillus coagulans 36D1] Length = 310 Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 162/305 (53%), Gaps = 5/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + L + P I ++TKGD++ + TL+++GGKG Sbjct: 1 MRTIVVGSRRSKLALTQTKWVVAKLEQLGL--PFRFEIREITTKGDKVLDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE +++ EID AVHS KD+P L GL I RED+RD IS L Sbjct: 59 LFVKEIEDAMLNHEIDMAVHSMKDVPAVLPDGLVIGCIPEREDVRDALISKNGTPFSSLK 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR A LL RSDI + RG I+TRL KL N AI+LA AG+KR+ Sbjct: 119 EGAVVGTSSLRRGAQLLAVRSDIRIKSVRGNIDTRLEKLKNGDYDAIVLAAAGLKRMGWS 178 Query: 183 KVI-KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E + + P+ GQGA+ +E ++ + + ++ ++ +T ++V ER FL +++ Sbjct: 179 ADTVTEFFDPDICLPAIGQGALAVECRADDGELLDALRKLDSAETAETVKAERVFLDKME 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ IAG A + +V + DGK ++ + + + + G AA + Sbjct: 239 GGCQVPIAGLAKKTAEGISLTALVASPDGKTVYKETVVSH--NPVTAGEKAADILSRQGA 296 Query: 302 KNVFN 306 K + Sbjct: 297 KALIE 301 >gi|224437777|ref|ZP_03658724.1| porphobilinogen deaminase [Helicobacter cinaedi CCUG 18818] gi|313144223|ref|ZP_07806416.1| porphobilinogen deaminase [Helicobacter cinaedi CCUG 18818] gi|313129254|gb|EFR46871.1| porphobilinogen deaminase [Helicobacter cinaedi CCUG 18818] Length = 323 Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats. Identities = 108/318 (33%), Positives = 172/318 (54%), Gaps = 17/318 (5%) Query: 1 MEK---KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57 M+ + IGTR S LAL A ++ L D + + + T+GD+I + L + Sbjct: 1 MQNVADRKLIIGTRGSALALWQAQYVKNRLKDECR---LDSEFKIIKTQGDKILDVPLAK 57 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 IGGKGLFT+E+E+KL+ EID AVHS KD+P ++L L ++A RED RD F+S +S Sbjct: 58 IGGKGLFTKELEQKLLDKEIDLAVHSLKDVPVEILPLLDLAAITEREDCRDCFLSMKYES 117 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L+ + +GT+SLRR + +R+D+ + RG I+TRL KL N AI+LA AG+K Sbjct: 118 LESLSQGARVGTTSLRRSMQIKAFRADLDTLSLRGNIQTRLEKLKNGVFDAIILAQAGVK 177 Query: 178 RLKKEKVI-----KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 RL + I+ ++ P+ GQGA+ IE ++P E + + H+ + V+ Sbjct: 178 RLGIDVKKNDMGICHIVPLDFMIPAMGQGALGIEMRKDSPY-FETISRLTHKRSALCVSA 236 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-----AIN 287 ER+F+ EL+G C+ I A + L +V +G+ + S + + A + Sbjct: 237 ERSFVRELEGGCQVPIGVQAMYENGILRLRAMVGLPNGQEILQESLEDSILEEDKAKAES 296 Query: 288 IGRDAAQYIRFISNKNVF 305 +G++ AQ K + Sbjct: 297 LGKNLAQSFIAKGAKEIL 314 >gi|256425452|ref|YP_003126105.1| porphobilinogen deaminase [Chitinophaga pinensis DSM 2588] gi|256040360|gb|ACU63904.1| porphobilinogen deaminase [Chitinophaga pinensis DSM 2588] Length = 307 Score = 231 bits (590), Expect = 7e-59, Method: Composition-based stats. Identities = 90/304 (29%), Positives = 146/304 (48%), Gaps = 7/304 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +IGTR S LAL A + + L ++ V++P+ ++GD L EIG + Sbjct: 1 MNREIKIGTRDSQLALWQANKVKGLLEAQ----GYSTVLVPIKSEGDIDLVTPLYEIGVQ 56 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLKD 120 G+FT+ ++ L++G ID AVHS KD+PT+L K + +A L R ++D+ + L Sbjct: 57 GIFTKSLDIALLNGRIDIAVHSLKDVPTQLPKNIIQAAVLERGPVKDLLVYRQDTAFLGQ 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + I TSS+RRKA LR + + RG + TRL KL + A AG++R+ Sbjct: 117 PEYIANIATSSVRRKAQWLRKYPKHQLHNLRGNVNTRLQKLAAENWDGAIFAAAGLERIG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + ++ P+P QGA+ ++ ++ N T ER FL L Sbjct: 177 V--RPATSIELDWMLPAPAQGAVVAVCREDDDFCRQACAPFNDLATALCTRVERDFLRTL 234 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C + I+ +A T++F G + + DG+ ++ DA IGR AA+ I Sbjct: 235 MGGCTTPISAYATISNETVHFSGELCSLDGQQLFTITEQLPLQDAGVIGRSAAEKILAQG 294 Query: 301 NKNV 304 + Sbjct: 295 GDKI 298 >gi|84494981|ref|ZP_00994100.1| porphobilinogen deaminase [Janibacter sp. HTCC2649] gi|84384474|gb|EAQ00354.1| porphobilinogen deaminase [Janibacter sp. HTCC2649] Length = 329 Score = 231 bits (590), Expect = 7e-59, Method: Composition-based stats. Identities = 93/304 (30%), Positives = 153/304 (50%), Gaps = 8/304 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+GTR S LA + L + H++ ++ ++T GDR L +GG G+F Sbjct: 2 TLRLGTRRSALATTQSGWVADQLRAL----GHDVELVEITTDGDRDRTTPLATMGGTGVF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L +G +D AVHS KD+PT L ++A PRED RD ++ +L +L Sbjct: 58 VSALRDALRAGTVDLAVHSLKDLPTTPEDDLAVAAIPPREDPRDALVARDGLTLGELPSG 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S +GT S RR+A L + + + RG ++TRL ++ + A++LA AG+ RL + V Sbjct: 118 STVGTGSPRRRAQLEALGLGLDIRELRGNVDTRLGRVTSGDLDAVVLAQAGLARLGRTSV 177 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E+++ P+PGQGA+ +E ++ ++ V ++ DT V+ ERA L+EL+ C Sbjct: 178 VTEVIDPIQMLPAPGQGALAVEVRADDAATRDAVAALDDADTRACVDAERAVLSELEVGC 237 Query: 245 KSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 + + A G L +V + DG S G+ DA IGR A+ + Sbjct: 238 SAPVGALAEIVLGDDGDELSLRAVVASPDGTGDIRRSATGSPTDADGIGRRLARLLLEDG 297 Query: 301 NKNV 304 ++ Sbjct: 298 AADL 301 >gi|124005986|ref|ZP_01690823.1| porphobilinogen deaminase [Microscilla marina ATCC 23134] gi|123988393|gb|EAY28039.1| porphobilinogen deaminase [Microscilla marina ATCC 23134] Length = 308 Score = 231 bits (590), Expect = 8e-59, Method: Composition-based stats. Identities = 105/303 (34%), Positives = 158/303 (52%), Gaps = 7/303 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A L ++ + TKGD+I N+ L++IG KG+FT Sbjct: 3 IRIGTRGSKLALWQANYVADLLQK----GGATTELVMVETKGDKILNKALSKIGSKGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLALH 124 EE+E+ L E+D AVHSAKD+ + L L++ A+ RE++ DV I +T L Sbjct: 59 EELEEHLRQKEVDIAVHSAKDVQSTLPDDLELIAFSEREEVHDVLISFNTDARLDTFNSS 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +IGTSS RR A L + I D RG ++TR+ KL A++LAYAG+ R+ K Sbjct: 119 YIIGTSSTRRVAQLKHYYPKIRTADVRGNLQTRMKKLEKGNYDALILAYAGVHRMGFSKY 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHV--NNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E L+ F P+ GQG + IE NN K + + +N + T + ER+FL L+G Sbjct: 179 IVEDLSPNKFIPAVGQGCVAIEAAKDLNNDKVAMIRQCVNDKKTEQCLRAERSFLKTLEG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C + G A K + + G +++ +G+ + G D ++IG+ A+ I + Sbjct: 239 GCSIPVFGLARIKKNQIELKGGIISLNGQDLVKQQAKGVLDDGVSIGKQLAERILQDGGE 298 Query: 303 NVF 305 + Sbjct: 299 EIL 301 >gi|164687765|ref|ZP_02211793.1| hypothetical protein CLOBAR_01407 [Clostridium bartlettii DSM 16795] gi|164603539|gb|EDQ97004.1| hypothetical protein CLOBAR_01407 [Clostridium bartlettii DSM 16795] Length = 298 Score = 231 bits (590), Expect = 8e-59, Method: Composition-based stats. Identities = 100/296 (33%), Positives = 153/296 (51%), Gaps = 3/296 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +GTR S LAL L + P + + TKGD I + L +IG KGLF Sbjct: 2 KLVVGTRGSNLALVQTNWVVDQLKKEN--PGVEFEVKIIKTKGDLIKDLPLDKIGDKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLAL 123 +EIEK L+ GEID AVHS KDMP+ L +GL+ + RED RD I +SL DL Sbjct: 60 VKEIEKSLLDGEIDMAVHSMKDMPSYLPEGLKFAHSPKREDPRDALIFKEGYKSLDDLPQ 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGT S RRK LL+ R D+ ++ RG IETR+ K+ K ++LA +G++R + Sbjct: 120 GARIGTGSKRRKYQLLKHRPDLEIVPIRGNIETRIKKIETEKLDGVVLAASGLRRAGLDD 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + + P+P QG + +E ++ + ++++ I + T ++ ER FL ++GS Sbjct: 180 KIDYYIPTDIMLPAPAQGILALEIREDDKETEKIIDSIKDDITKIQIDAERGFLIGVNGS 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 C + + +G + G+ +GK S+ G DA IG + A+ + Sbjct: 240 CHIPMGAYCEIEGEKITLTGLYGDGEGKKIVVQSQVGTLADAPKIGYELAKSVLKE 295 >gi|209516094|ref|ZP_03264954.1| porphobilinogen deaminase [Burkholderia sp. H160] gi|209503554|gb|EEA03550.1| porphobilinogen deaminase [Burkholderia sp. H160] Length = 332 Score = 231 bits (590), Expect = 8e-59, Method: Composition-based stats. Identities = 104/303 (34%), Positives = 162/303 (53%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P + I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 12 TLVIASRESRLAMWQAEHVRCALHKLY--PSCEVKILGMTTRGDQILDRTLSKVGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G +S + RED RD +S+ SL L Sbjct: 70 VKELEAALADGRADLAVHSLKDVPMELPAGFVLSTIMEREDPRDALVSNQYDSLAALPAG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L ++ V RG ++TR+ KL+ AI+LA AG+KRL Sbjct: 130 AVVGTSSLRREAMLRMRYPNLDVRPLRGNLDTRVAKLDRGDYAAIILAAAGLKRLGLADR 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+ ED P+ GQGA+ IE + + ++H+ T +V ER L GSC Sbjct: 190 IRALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHQHTAAAVEAERMVSRALGGSC 249 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISN 301 + +A +A L+ GIV DG+ + A+ +G + A + Sbjct: 250 EVPLAAYATWGDGALHLRGIVATPDGQRVLSAQASAPAPTLERALALGEEVAHSLVQQGA 309 Query: 302 KNV 304 ++ Sbjct: 310 LDI 312 >gi|161702955|ref|YP_369990.2| porphobilinogen deaminase [Burkholderia sp. 383] Length = 334 Score = 231 bits (590), Expect = 8e-59, Method: Composition-based stats. Identities = 109/303 (35%), Positives = 166/303 (54%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVNILGMTTRGDQILDRTLSKVGGKGLF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 76 VKELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAG 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E Sbjct: 136 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLETR 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC Sbjct: 196 IRALLDVEASPPAAGQGALGIEIASHRSDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 255 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + +A A + LY G V +DGK G DA+ +GR + + Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGA 315 Query: 302 KNV 304 ++ Sbjct: 316 LDI 318 >gi|73662403|ref|YP_301184.1| porphobilinogen deaminase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123761533|sp|Q49YA2|HEM3_STAS1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|72494918|dbj|BAE18239.1| porphobilinogen deaminase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 308 Score = 231 bits (589), Expect = 9e-59, Method: Composition-based stats. Identities = 100/305 (32%), Positives = 167/305 (54%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L + P I I + TKGD I ++ L+++GGKG Sbjct: 1 MRKLVVGSRRSKLALTQSRQFIDKLKAI--DPSLEIEIKEIVTKGDLIVDKQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L + ID A+HS KD+P+ + GL + RE+ D +I+ L +L Sbjct: 59 LFVKEIQNELFNHGIDMAIHSLKDVPSVIPDGLTLGCIPDRENPYDAYIAKNHVPLNELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 +S++GTSSLRR A +L + + RG I+TRLNKL AI+LA AG+KR+ Sbjct: 119 DNSIVGTSSLRRGAQILAKYPKLQIKWIRGNIDTRLNKLETEDYDAIILAAAGLKRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ L+ E P+ GQGA+ IE ++ L+ ++++D D V ER FL ++ Sbjct: 179 DDIVTSYLDKETLIPAIGQGALGIECRSDDETLLSLLSKVHNQDVADCVTAERTFLTRMN 238 Query: 242 GSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ I G+A + T+ F G++++ DGK ++ + G D + +G + + + Sbjct: 239 GSCQVPIGGYATKEADGTIEFTGLIMSPDGKERYQHTVRGT--DPVALGEEVTKVLNEQG 296 Query: 301 NKNVF 305 + Sbjct: 297 AYEII 301 >gi|116690445|ref|YP_836068.1| porphobilinogen deaminase [Burkholderia cenocepacia HI2424] gi|105893551|gb|ABF76716.1| porphobilinogen deaminase [Burkholderia cenocepacia AU 1054] gi|116648534|gb|ABK09175.1| porphobilinogen deaminase [Burkholderia cenocepacia HI2424] Length = 403 Score = 231 bits (589), Expect = 9e-59, Method: Composition-based stats. Identities = 109/303 (35%), Positives = 165/303 (54%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 87 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 144 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 145 VKELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAG 204 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E Sbjct: 205 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 264 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC Sbjct: 265 IRALLDVEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 324 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + +A A + LY G V +DGK G DA+ +GR + + Sbjct: 325 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGA 384 Query: 302 KNV 304 ++ Sbjct: 385 LDI 387 >gi|154148130|ref|YP_001406461.1| porphobilinogen deaminase [Campylobacter hominis ATCC BAA-381] gi|166201500|sp|A7I1S0|HEM3_CAMHC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|153804139|gb|ABS51146.1| porphobilinogen deaminase [Campylobacter hominis ATCC BAA-381] Length = 308 Score = 231 bits (589), Expect = 9e-59, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 164/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 RI TR S LAL + ++ + + + + + TKGD I + L +IGGKG Sbjct: 1 MNKLRIATRGSALALWQSKYIQNLIENNT---EVEVELQSMKTKGDVILDTPLAKIGGKG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E+ ++ GE D AVHS KD+P KGL ++A RED+RD F+S S +L Sbjct: 58 LFTKELEESMLRGESDLAVHSLKDVPVVFPKGLILTAISEREDVRDSFVSEKFASFNELP 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GT+SLRRK LL R D+ +I RG I TRL KL N+ AI+LA AG+KRL Sbjct: 118 KGAKVGTTSLRRKMQLLIKRPDLKIISLRGNINTRLRKLKENEFDAIILASAGLKRLNLM 177 Query: 183 KVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + IK + +++ P+ GQGA+ IE + + E++K IN+E++ + ER F+A+L Sbjct: 178 ENIKYFVPFSLDEMIPAMGQGALGIECV-DKSEVIEILKFINNENSVIATTIERDFVAKL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I A G + IV DG F + R ++ D N G A Sbjct: 237 NGGCQVPIGVNAEISGDIIKVRAIVGLPDGSEFIKDKREISKADFKNFGTKLADEFISRG 296 Query: 301 NKNVF 305 + Sbjct: 297 AIELL 301 >gi|77967966|gb|ABB09346.1| Porphobilinogen deaminase [Burkholderia sp. 383] Length = 378 Score = 231 bits (589), Expect = 9e-59, Method: Composition-based stats. Identities = 109/303 (35%), Positives = 166/303 (54%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 62 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVNILGMTTRGDQILDRTLSKVGGKGLF 119 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 120 VKELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAG 179 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E Sbjct: 180 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLETR 239 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC Sbjct: 240 IRALLDVEASPPAAGQGALGIEIASHRSDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 299 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + +A A + LY G V +DGK G DA+ +GR + + Sbjct: 300 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGA 359 Query: 302 KNV 304 ++ Sbjct: 360 LDI 362 >gi|152992229|ref|YP_001357950.1| porphobilinogen deaminase [Sulfurovum sp. NBC37-1] gi|166217789|sp|A6Q7Y4|HEM3_SULNB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|151424090|dbj|BAF71593.1| porphobilinogen deaminase [Sulfurovum sp. NBC37-1] Length = 323 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 107/312 (34%), Positives = 165/312 (52%), Gaps = 10/312 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK I TR S LAL A+ + + P + + +++KGD+I ++ L +GG Sbjct: 1 MEK--LVIATRASNLALWQAYHIKERIETA--FPEVRVELNEITSKGDKILDKPLALVGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG FT+E+E ++I+G AVHS KD+PT + +GL++ A R+D DVF+SHT +SL + Sbjct: 57 KGHFTKELEDEMIAGNAHLAVHSLKDVPTYIPEGLELCAITERQDQSDVFLSHTYKSLSE 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GT+SLRR+ LL R D+ V D RG + TRL KL + AI+LAY G+ RL Sbjct: 117 LPEGAVVGTTSLRRRMQLLEKRPDLKVKDLRGNVNTRLRKLKEGQYDAIILAYIGLYRLD 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K I + ++ F P GQ A+ IE NN + +E+ +NHE T+ ER F++ + Sbjct: 177 LLKDIPYVEKLDFFIPPMGQAALGIEIVANNDRIREIAMTLNHEPTFICTKVERDFISVI 236 Query: 241 DGSCKSAIAGFAYCKGS------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 C + +A A T+ ++ DG S +A +G + AQ Sbjct: 237 GAGCSAPVAVNATMDKKEDDKVPTISVRAMIGYPDGTHILHKSLTVPLNEADILGDELAQ 296 Query: 295 YIRFISNKNVFN 306 + ++ Sbjct: 297 AMIEEGALDILE 308 >gi|295675858|ref|YP_003604382.1| porphobilinogen deaminase [Burkholderia sp. CCGE1002] gi|295435701|gb|ADG14871.1| porphobilinogen deaminase [Burkholderia sp. CCGE1002] Length = 332 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 106/303 (34%), Positives = 162/303 (53%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 12 TLVIASRESRLAMWQAEHVRCALHKLY--PSCDVKILGMTTRGDQILDRTLSKVGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G +S + RED RD +S+ SL L Sbjct: 70 VKELEAALADGRADLAVHSLKDVPMELPAGFALSTIMEREDPRDALVSNQYDSLAALPAG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 130 AVVGTSSLRREAMLRMRYPHLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLADR 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+ ED P+ GQGA+ IE + + ++H+ T +V ER L GSC Sbjct: 190 IRALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHQHTAAAVEAERMVSRALGGSC 249 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301 + +A +A L+ GIV DG+ + A+ +G + AQ + Sbjct: 250 EVPLAAYATWGDGALHLRGIVATPDGQRVLSAQASAPAPTVERALALGEEVAQSLAQQGA 309 Query: 302 KNV 304 + Sbjct: 310 LEI 312 >gi|154174368|ref|YP_001408386.1| porphobilinogen deaminase [Campylobacter curvus 525.92] gi|259647805|sp|A7GYU4|HEM3_CAMC5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|112802609|gb|EAT99953.1| porphobilinogen deaminase [Campylobacter curvus 525.92] Length = 311 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 156/305 (51%), Gaps = 5/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +I TR S LAL + ++ LM H + ++ + TKGD I + L +IGGKG Sbjct: 1 MKILKIATRKSALALWQSEHIKARLMAQHA--GLQVELVGMKTKGDVILDTPLAKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E ++SG+ AVHS KD+P L GL ++A RED+RD IS DL Sbjct: 59 LFTKELEDSMLSGQTHIAVHSLKDVPVAFLDGLVLAAICSREDVRDAMISQRYVKFDDLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GT+SLRRK LLR R D+++I RG ++TRL KL + AI+LA AGI RL Sbjct: 119 QSAKVGTTSLRRKMQLLRMRPDLNIISLRGNVQTRLRKLKEGEFDAIILAMAGINRLNLA 178 Query: 183 KVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I + P+ GQGA+ +E + + E +K +N E + ER F+ L Sbjct: 179 DEVAHIYPFDIAQMTPAMGQGALGVEAVDDA-QILEKIKFLNDERSVIETRVERDFVTLL 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I A + IV DG + + + ++G++ A+ Sbjct: 238 EGGCQVPIGINARLASEEIEINAIVGLPDGSEVITENLTAKKSEFESVGKELAREFIARG 297 Query: 301 NKNVF 305 K + Sbjct: 298 AKELL 302 >gi|27468263|ref|NP_764900.1| porphobilinogen deaminase [Staphylococcus epidermidis ATCC 12228] gi|57867145|ref|YP_188808.1| porphobilinogen deaminase [Staphylococcus epidermidis RP62A] gi|251811065|ref|ZP_04825538.1| hydroxymethylbilane synthase [Staphylococcus epidermidis BCM-HMP0060] gi|282875909|ref|ZP_06284776.1| hydroxymethylbilane synthase [Staphylococcus epidermidis SK135] gi|293366381|ref|ZP_06613060.1| hydroxymethylbilane synthase [Staphylococcus epidermidis M23864:W2(grey)] gi|38258087|sp|Q8CNY8|HEM3_STAES RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|71152115|sp|Q5HNN3|HEM3_STAEQ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|27315809|gb|AAO04944.1|AE016748_178 porphobilinogen deaminase [Staphylococcus epidermidis ATCC 12228] gi|57637803|gb|AAW54591.1| porphobilinogen deaminase [Staphylococcus epidermidis RP62A] gi|251805400|gb|EES58057.1| hydroxymethylbilane synthase [Staphylococcus epidermidis BCM-HMP0060] gi|281294934|gb|EFA87461.1| hydroxymethylbilane synthase [Staphylococcus epidermidis SK135] gi|291319506|gb|EFE59873.1| hydroxymethylbilane synthase [Staphylococcus epidermidis M23864:W2(grey)] gi|329733769|gb|EGG70095.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU045] gi|329737359|gb|EGG73613.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU028] Length = 308 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 101/305 (33%), Positives = 173/305 (56%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L P +I I + TKGD+I ++ L+++GGKG Sbjct: 1 MRKLIVGSRRSKLALTQSQQFIDKLK--FIDPSLDIEIKEIVTKGDKIVDKQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L + EID A+HS KD+P+ + GL + RE D +I+ L++L+ Sbjct: 59 LFVKEIQNELFNKEIDMAIHSLKDVPSMIPDGLTLGCIPDREIPFDAYIAKNHIPLQELS 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ Sbjct: 119 EGSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ L+ + P+ GQGA+ IE ++ + +L+ +++ D V ER FL+E+D Sbjct: 179 DNIVTTYLDRDILLPAIGQGALGIECRSDDKELLDLLSKVHNHDVAQCVTAERTFLSEMD 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ I G+A + + + F G++++ DGK +E + G D + +G + +Q ++ Sbjct: 239 GSCQVPIGGYATIAQDNQIEFTGLIMSPDGKERYEHTALGT--DPVKLGIEVSQVLKKQG 296 Query: 301 NKNVF 305 ++ Sbjct: 297 AYDII 301 >gi|311745811|ref|ZP_07719596.1| hydroxymethylbilane synthase [Algoriphagus sp. PR1] gi|126576013|gb|EAZ80291.1| hydroxymethylbilane synthase [Algoriphagus sp. PR1] Length = 312 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 8/309 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +IGTR S LAL A+ L+ I+ + TKGD+I + ++ +IG Sbjct: 1 MS-KLIKIGTRGSKLALWQAYYVEELLVKA----GLKAEIVIIDTKGDQILDVSIAKIGS 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLK 119 KG+FT+E+E +L+ G ID AVHSAKDM + L +G +I A+ RE DV L Sbjct: 56 KGVFTQELEDQLLDGRIDIAVHSAKDMQSNLPEGFEIIAFTERETENDVLASHKKDIDLS 115 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 + +GTSS RR A L + + ++ RG ++TR+ K+ A+LLAYAG+ R+ Sbjct: 116 GASKPLTLGTSSTRRVATLKHFYPHVKTVEVRGNLQTRIRKMEEGLCDALLLAYAGVHRM 175 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV--KVINHEDTWDSVNCERAFL 237 +++I + L++ +F P+ GQG++ IE + NH +T + ERA+L Sbjct: 176 GYDEMIAQKLDLNEFTPAVGQGSVAIEVAEKLDPEVKKQIIDACNHTETSLKLRAERAYL 235 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L+G C + A +G + G +++ DG + +G+ D IG+ A+ + Sbjct: 236 RVLEGGCSIPVFALATMEGEEIKLKGGIVSLDGSERISLLVSGSASDPEKIGKQLAKEVF 295 Query: 298 FISNKNVFN 306 K + + Sbjct: 296 AAGGKVILD 304 >gi|319400986|gb|EFV89205.1| porphobilinogen deaminase [Staphylococcus epidermidis FRI909] Length = 308 Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 101/305 (33%), Positives = 174/305 (57%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L P +I I + TKGD+I ++ L+++GGKG Sbjct: 1 MRKLIVGSRRSKLALTQSQQFIDKLK--FIDPSLDIEIKEIVTKGDKIVDKQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L + EID A+HS KD+P+ + GL + RE D +I+ L++L+ Sbjct: 59 LFVKEIQNELFNKEIDMAIHSLKDVPSIIPDGLTLGCIPDREIPFDAYIAKNHIPLEELS 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ Sbjct: 119 EGSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ L+ + P+ GQGA+ IE ++ + +L+ +++ D V ER FL+E+D Sbjct: 179 DNIVTTYLDRDVLLPAIGQGALGIECRSDDKELLDLLTKVHNHDVAQCVTAERTFLSEMD 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ I G+A + + + F G++++ DGK +E + G+ D + +G + +Q ++ Sbjct: 239 GSCQVPIGGYATIVQDNQIEFTGLIMSPDGKERYEHTTLGS--DPVQLGIEVSQVLKKQG 296 Query: 301 NKNVF 305 ++ Sbjct: 297 AYDII 301 >gi|329724698|gb|EGG61204.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU144] Length = 308 Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 101/305 (33%), Positives = 173/305 (56%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L P +I I + TKGD+I ++ L+++GGKG Sbjct: 1 MRKLIVGSRRSKLALTQSQQFIDKLK--FIDPSLDIEIKEIVTKGDKIVDKQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L + EID A+HS KD+P+ + GL + RE D +I+ L++L+ Sbjct: 59 LFVKEIQNELFNKEIDMAIHSLKDVPSMIPDGLTLGCIPDREIPFDAYIAKNHIPLQELS 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ Sbjct: 119 EGSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRIGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ L+ + P+ GQGA+ IE ++ + +L+ +++ D V ER FL+E+D Sbjct: 179 DNIVTTYLDRDILLPAIGQGALGIECRSDDKELLDLLSKVHNHDVAQCVTAERTFLSEMD 238 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ I G+A + + + F G++++ DGK +E + G D + +G + +Q ++ Sbjct: 239 GSCQVPIGGYATIAQDNQIEFTGLIMSPDGKERYEHTALGT--DPVKLGIEVSQVLKKQG 296 Query: 301 NKNVF 305 ++ Sbjct: 297 AYDII 301 >gi|148234672|ref|NP_001090881.1| porphobilinogen deaminase [Sus scrofa] gi|112980813|gb|ABI29188.1| hydroxymethylbilane synthase [Sus scrofa] Length = 361 Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 159/338 (47%), Gaps = 35/338 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE D + H ++L Sbjct: 75 SLFTKELEHALERNEVDLVVHSLKDLPTVLPPGFTIGAVCKRECPYDAVVFHPKFVGKTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177 + L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++ Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQ 194 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 195 RMGWQNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 254 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284 L+G C +A K LY G V + +G + + +G D Sbjct: 255 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLNGAESMQETMQATIHVPAQHEDGPEDDPQ 314 Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 315 LVGITARNIPREAQLAAENLGISLATLLLNKGAKNILD 352 >gi|326409887|gb|ADZ66952.1| Porphobilinogen deaminase [Brucella melitensis M28] Length = 277 Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 129/273 (47%), Positives = 179/273 (65%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P I I+P+ST GDRI +R L+E+GGKGLFTEEIE+ L G ID AVHS KDMPT L + Sbjct: 2 PEDAIEILPMSTAGDRIQDRPLSEVGGKGLFTEEIEQALKDGRIDIAVHSTKDMPTALPE 61 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL +S +L RED RD FI +A+ DL + +G+SSLRR+AL+ R R DI V+ +RG Sbjct: 62 GLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVGSSSLRRQALIRRLRPDIEVVMYRGN 121 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 ++TRL KL+ + LA AG++RL VI ++L+ FPP+PGQGAI IE+ + + + Sbjct: 122 VDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDVLDPSVFPPAPGQGAIGIESRIGDER 181 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 L+ + H +T ++ CERAFL LDGSC++ IAG A +G L F G++L DG+ Sbjct: 182 IDVLLAPLAHRETQIALACERAFLGALDGSCRTPIAGLATVEGDRLSFRGMILTPDGRQA 241 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 HEV+ G DA +G DAA +R ++ + F+ Sbjct: 242 HEVTAEGVVSDAAALGTDAANRVRAMAGPHFFD 274 >gi|332527780|ref|ZP_08403819.1| porphobilinogen deaminase [Rubrivivax benzoatilyticus JA2] gi|332112176|gb|EGJ12152.1| porphobilinogen deaminase [Rubrivivax benzoatilyticus JA2] Length = 309 Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 104/310 (33%), Positives = 153/310 (49%), Gaps = 9/310 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M I TR S LAL A R L + ++ ++TKGD+I +R L+++GG Sbjct: 1 MSSNTI-IATRESRLALWQAEHVRDVLTARF---GLAVELLGMTTKGDQILDRALSKVGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L G AVHS KD+P L G ++A RED RD ++S+ ++L Sbjct: 57 KGLFVKELETALEEGRAHLAVHSLKDVPMDLPPGFALAAIWEREDPRDAWVSNQYENLDA 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSSLRR LL R D+ + RG ++TRL KL+ AI+LA AG+KRL Sbjct: 117 LPQGACVGTSSLRRVVQLLARRPDLKIEPLRGNLDTRLRKLDEGGYDAIVLAAAGLKRLG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ + + P+ GQGA+ IE ++ + +EL+ H T+ + + ERA L Sbjct: 177 LGARIRSLFDTSVMIPAAGQGALGIEIREDDTRLKELLAQTLHLPTFLACHAERAVSRSL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASD--GKIFHEVSRNGNRCD---AINIGRDAAQY 295 GSC +A F L + S + +V G D A +G AA Sbjct: 237 GGSCSMPLAAFGQWNDGVLTIDAALGHSTELTRPLIKVRVTGTPTDEASARALGEHAAAL 296 Query: 296 IRFISNKNVF 305 +R + Sbjct: 297 LREAGAGDYL 306 >gi|224083036|ref|XP_002187797.1| PREDICTED: hydroxymethylbilane synthase [Taeniopygia guttata] Length = 371 Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 106/335 (31%), Positives = 155/335 (46%), Gaps = 35/335 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + L +++ P + I+ +ST GD+I + L++IG K L Sbjct: 29 RAIRVGTRRSQLARIQTDSVVTMLRELY--PDLHFEIVAMSTTGDKILDTALSKIGEKSL 86 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-- 121 FT+E+E L E+D VHS KD+PT L I A RE+ D + H K L Sbjct: 87 FTKELENALERNEVDLVVHSLKDLPTSLPPDFTIGAVCKRENPLDAVVFHPKNCGKTLSL 146 Query: 122 -ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 SVIGTSSLRR A L + + D RG + TRL KL+ AI+LA AG+KR+ Sbjct: 147 LPEKSVIGTSSLRRAAQLKKKFPHLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRM 206 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E I ++L+ ED + GQGA+ +E + + +V ++ DT ERAF+ Sbjct: 207 GWENRIGQLLSPEDCLYAVGQGALAVEVRAKDQEILNMVSALHDADTVLCCIAERAFMKR 266 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 267 LEGGCSVPVAVNTLLKDGQLYLTGAVYSLDGSDSLKETMQTGVSYPHQNEDGPNDDVQHV 326 Query: 285 --------------AINIGRDAAQYIRFISNKNVF 305 A N+G + A + K++ Sbjct: 327 GITAKNVPGQAQEAAENLGVELASLLLSKGAKHIL 361 >gi|94498044|ref|ZP_01304607.1| porphobilinogen deaminase [Sphingomonas sp. SKA58] gi|94422479|gb|EAT07517.1| porphobilinogen deaminase [Sphingomonas sp. SKA58] Length = 313 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 117/292 (40%), Positives = 160/292 (54%), Gaps = 6/292 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P R+GTR SPLALA A T +L+ H I I+ + T GDRI +R L +IGGK L Sbjct: 11 RPLRLGTRGSPLALAQARLTAQALIAAHGWSADAIEIVTVQTSGDRIQDRALADIGGKAL 70 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +T+E+++ L++GE D +VHS KD+ T I+A LPR D RD I A S L Sbjct: 71 WTKELDRALVAGETDLSVHSMKDVETVRHDIFHIAAMLPRADPRDKLI--GAASFDALPP 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + ++GTSS RR A + R R D ++ FRG + TRL KL + HA LLA AG+ RL + Sbjct: 129 NPIVGTSSPRRGAQVKRLRPDATITLFRGNVATRLAKLAAGEVHATLLAAAGLDRLDQGN 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V I+ ++ P+P QGA+ IE N E V INH DT+D+V ERA L L G+ Sbjct: 189 VGT-IIPVDTMLPAPSQGAVGIEILAGNAPVIEAVAAINHRDTFDTVMMERAVLRGLGGT 247 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS---RNGNRCDAINIGRDA 292 C S IA A G L +++ DG+ + G+ +GR Sbjct: 248 CHSPIAALALVDGDDLMLRAEIISPDGQETVSENLRLARGDLDAGEALGRAL 299 >gi|187929644|ref|YP_001900131.1| porphobilinogen deaminase [Ralstonia pickettii 12J] gi|309781590|ref|ZP_07676324.1| hydroxymethylbilane synthase [Ralstonia sp. 5_7_47FAA] gi|187726534|gb|ACD27699.1| porphobilinogen deaminase [Ralstonia pickettii 12J] gi|308919565|gb|EFP65228.1| hydroxymethylbilane synthase [Ralstonia sp. 5_7_47FAA] Length = 338 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 160/305 (52%), Gaps = 6/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LAL A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF Sbjct: 25 KLVIASRESRLALWQAEHVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLF 82 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L +G +SA L RED RD FIS+ L L Sbjct: 83 VKELEVALAEGRADLAVHSLKDVPMELPEGFALSAILEREDPRDAFISNDYADLASLPAG 142 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A L + + RG ++TRL KL+ AI+LA AG+KRL Sbjct: 143 AVVGTSSLRREASLRARFPHLVIQPLRGNLDTRLGKLDRGDYAAIILAAAGLKRLGLVDR 202 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + E+ P+ GQGA+ IE + + + ++ E T +V ERA L GSC Sbjct: 203 IRSTIAPEESLPAAGQGALGIEIRADRADVRACLAPLHDEPTALAVTAERAVSRILGGSC 262 Query: 245 KSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIRFIS 300 + +A FA G TL V + DG +A +G AQ + Sbjct: 263 QVPLASFAQWSDGGTLRLRAFVASQDGTRKLAADGEATPSTLAEADALGVRVAQQMLAGG 322 Query: 301 NKNVF 305 +++ Sbjct: 323 ARDIL 327 >gi|152980451|ref|YP_001352832.1| hydroxymethylbilane synthase [Janthinobacterium sp. Marseille] gi|151280528|gb|ABR88938.1| hydroxymethylbilane synthase [Janthinobacterium sp. Marseille] Length = 317 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 104/302 (34%), Positives = 159/302 (52%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R S LA+ A R L ++ P +I I+ ++T+GD+I +RTL+++GGKGL Sbjct: 7 KKLVIASRESRLAMWQAEHVREKLAILY--PQCSIEILGMTTRGDQILDRTLSKVGGKGL 64 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E + D AVHS KD+ L G +++A L RED RD F+S+ +L+ L Sbjct: 65 FVKELEVAIAEQRADLAVHSLKDVAMTLPDGFELAAVLEREDPRDAFVSNEFDTLEALPA 124 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+AL+ + + RG ++ RL KL+N + AI+LA AG+KRL Sbjct: 125 GAIVGTSSLRRQALIAARYPQLVIRPLRGNLDRRLGKLDNGEYAAIILAAAGLKRLGLTA 184 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ L E P+PGQGA+ IE +E + +NH +T +V ER GS Sbjct: 185 RIRSYLPPEQSLPAPGQGAMAIEILSERADLKEWLAPLNHTETALAVTAERTVSRNFGGS 244 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ +A FA G + I+ DG +G +GR A ++ Sbjct: 245 CQIPLAAFATIDGVNMRLRAIIATPDGSKMASADLSGAANAPEALGRQIADALQQQDAAA 304 Query: 304 VF 305 + Sbjct: 305 IL 306 >gi|162218053|ref|YP_621689.2| porphobilinogen deaminase [Burkholderia cenocepacia AU 1054] Length = 334 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 109/303 (35%), Positives = 165/303 (54%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 76 VKELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAG 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E Sbjct: 136 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC Sbjct: 196 IRALLDVEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 255 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + +A A + LY G V +DGK G DA+ +GR + + Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGA 315 Query: 302 KNV 304 ++ Sbjct: 316 LDI 318 >gi|330824252|ref|YP_004387555.1| Porphobilinogen deaminase [Alicycliphilus denitrificans K601] gi|329309624|gb|AEB84039.1| Porphobilinogen deaminase [Alicycliphilus denitrificans K601] Length = 309 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 105/301 (34%), Positives = 156/301 (51%), Gaps = 8/301 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P I TR S LAL A ++ L H++ ++ ++T+GD+I +RTL+++GGKGLF Sbjct: 9 PIVIATRESQLALWQAEHVQALLAAR----GHSVSLLGMTTRGDQILDRTLSKVGGKGLF 64 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G ++ + RED RD F+S SL +L Sbjct: 65 VKELEVALEEGRADIAVHSLKDVPMELPDGFALACIMEREDPRDAFVSPHHASLDELPQG 124 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL + Sbjct: 125 AVVGTSSLRRQVLLQALRPDLKIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHER 184 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + P+ GQGA+ IE ++ + + HE TW +V ERA + GSC Sbjct: 185 IRSVFEPGQMLPAAGQGALGIEIRSQRQDLRDALAPLAHERTWLTVTAERAVSRAMGGSC 244 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGK-IFHEVS---RNGNRCDAINIGRDAAQYIRFIS 300 +A G TL +G+ R +A +G A +R Sbjct: 245 SMPLAAHGVWSGDTLRLQAAWGDVEGRLPLVRAEGSSRVATLDEADALGLAVAGRLRAAG 304 Query: 301 N 301 Sbjct: 305 A 305 >gi|170733765|ref|YP_001765712.1| porphobilinogen deaminase [Burkholderia cenocepacia MC0-3] gi|238058731|sp|B1JWR0|HEM3_BURCC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|169817007|gb|ACA91590.1| porphobilinogen deaminase [Burkholderia cenocepacia MC0-3] Length = 334 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 109/303 (35%), Positives = 165/303 (54%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 76 VKELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAG 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E Sbjct: 136 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC Sbjct: 196 IRALLDVEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 255 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + +A A + LY G V +DGK G DA+ +GR + + Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGA 315 Query: 302 KNV 304 ++ Sbjct: 316 LDI 318 >gi|255262497|ref|ZP_05341839.1| porphobilinogen deaminase [Thalassiobium sp. R2A62] gi|255104832|gb|EET47506.1| porphobilinogen deaminase [Thalassiobium sp. R2A62] Length = 316 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 131/305 (42%), Positives = 176/305 (57%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KP +IGTR SPLALA A ETR L +P I + T GDRI +R L EIGGKG Sbjct: 9 TKPLKIGTRGSPLALAQAHETRERLAAAFDLPHEAFAIQVIQTTGDRIIDRPLKEIGGKG 68 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT EIE+ ++ G ID AVHS KDMPT GL + YLPRED+RD FI+ +L DL Sbjct: 69 LFTREIEQAMLDGSIDIAVHSMKDMPTLQPDGLLLDTYLPREDVRDAFIALDGGTLADLP 128 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 V+GTSSLRR+A L R D+ V++FRG ++TRL KL + A A LA AG+ RLK + Sbjct: 129 DGGVVGTSSLRRQAQLRLRRPDLQVVEFRGNLQTRLRKLGDKVADATFLAMAGLNRLKMD 188 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V + + +E+ P+ QGAI IE N+ +A +++ I+ T ++ ERAFL LDG Sbjct: 189 DVTRTPIEVEEMLPAVAQGAIGIERRANDLRAADMLAAIHDRLTGQRLSAERAFLQALDG 248 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 SC++ IA A G+++ G VL DG D G+ A + + + Sbjct: 249 SCETPIAALAELDGTSMRLRGEVLRPDGSEAIGDDVTILIEDGAAAGQAMAARLLANAGE 308 Query: 303 NVFNF 307 F++ Sbjct: 309 GFFDW 313 >gi|319763492|ref|YP_004127429.1| porphobilinogen deaminase [Alicycliphilus denitrificans BC] gi|317118053|gb|ADV00542.1| porphobilinogen deaminase [Alicycliphilus denitrificans BC] Length = 309 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 105/301 (34%), Positives = 156/301 (51%), Gaps = 8/301 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P I TR S LAL A ++ L H++ ++ ++T+GD+I +RTL+++GGKGLF Sbjct: 9 PIVIATRESQLALWQAEHVQALLAAR----GHSVSLLGMTTRGDQILDRTLSKVGGKGLF 64 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G ++ + RED RD F+S SL +L Sbjct: 65 VKELEVALEEGRADIAVHSLKDVPMELPDGFALACVMEREDPRDAFVSPHHASLDELPQG 124 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL + Sbjct: 125 AVVGTSSLRRQVLLQALRPDLKIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHER 184 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + P+ GQGA+ IE ++ + + HE TW +V ERA + GSC Sbjct: 185 IRSVFEPGQMLPAAGQGALGIEIRSQRQDLRDALAPLAHERTWLTVTAERAVSRAMGGSC 244 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGK-IFHEVS---RNGNRCDAINIGRDAAQYIRFIS 300 +A G TL +G+ R +A +G A +R Sbjct: 245 SMPLAAHGVWSGDTLRLQAAWGDVEGRLPLVRAEGSSRVATLDEADALGLAVAGRLRAAG 304 Query: 301 N 301 Sbjct: 305 A 305 >gi|115352519|ref|YP_774358.1| porphobilinogen deaminase [Burkholderia ambifaria AMMD] gi|122322497|sp|Q0BCU9|HEM3_BURCM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|115282507|gb|ABI88024.1| porphobilinogen deaminase [Burkholderia ambifaria AMMD] Length = 328 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 71 VKELENALADGRADLAVHSLKDVPMALPDGFALTAIMEREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E Sbjct: 131 AVVGTSSLRREAMLRARYPHLDVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ ++++ED PP+ GQGA+ IE + + ++ T +V ER L GSC Sbjct: 191 IRTLIDVEDSPPAAGQGALGIEIATHRTDVAAWLAPLHDPRTALAVEAERMVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + +A A + LY G V +DG+ G DA+ +GR + + Sbjct: 251 EVPLAAHAVWRAGELYLTGRVSTTDGQRVLTAEECGAVMTVADALALGRAVSDELEAQGA 310 Query: 302 KNVFN 306 ++ N Sbjct: 311 LDIVN 315 >gi|78777061|ref|YP_393376.1| hydroxymethylbilane synthase [Sulfurimonas denitrificans DSM 1251] gi|123727562|sp|Q30S90|HEM3_SULDN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|78497601|gb|ABB44141.1| hydroxymethylbilane synthase [Sulfurimonas denitrificans DSM 1251] Length = 313 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 101/306 (33%), Positives = 162/306 (52%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR S LAL + ++ L + + P + + + T GDRI ++ L++IGGKG Sbjct: 1 MKKLVIATRGSQLALWQSNHIKAILQEQN--PGLEVELNVIVTTGDRIQDKALSKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E+ ++ GE AVHS KD+PT + GL ++A RED RD +S ++ L Sbjct: 59 LFLKELEEAMLQGEAQIAVHSLKDVPTVMPDGLILAAITEREDSRDALLSEKYANIDALP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-- 180 ++V+GTSSLRR+ + + R D+ + D RG ++TR+ KL + AI+LA AGI RL Sbjct: 119 KNAVVGTSSLRRRMQIQKLRPDLIIKDLRGNVDTRIRKLKEGEFDAIILAAAGINRLSLL 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +++E+ PS GQGA+ IE + + +V + E + ER+F+ EL Sbjct: 179 DAVKHVYPISLEEMVPSMGQGALGIEAVNDA-EVLRIVAGLEDEYSRIETTIERSFVDEL 237 Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ I A T+ ++ +G+ S+ ++ D NIGR+ A Sbjct: 238 EGGCQVPIGVNASVLDDGTISIRAVLGLPNGEEMLSDSKITSKKDYENIGREIAAEFIEK 297 Query: 300 SNKNVF 305 K + Sbjct: 298 GAKELL 303 >gi|219848200|ref|YP_002462633.1| porphobilinogen deaminase [Chloroflexus aggregans DSM 9485] gi|219542459|gb|ACL24197.1| porphobilinogen deaminase [Chloroflexus aggregans DSM 9485] Length = 324 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 14/310 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LA + + L + ++ + ++T GDR+ + L+ +G KGLF +E Sbjct: 6 LGTRGSALARTQSEWVANVLR--NTFADLSVELRIITTTGDRVLDVALSAVGDKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL---ALH 124 +E+ L++G++D VHSAKDMPT GL +SA+ RED RDV + A DL Sbjct: 64 LEQALLAGDVDLCVHSAKDMPTATPPGLMLSAFPVREDPRDVLVVRHADVGTDLATLPTG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGTSSLRR + L R D+ + D RG ++TRL KL +++ A++LA AG++RL Sbjct: 124 ARIGTSSLRRASQLRYHRPDLHLNDVRGNVDTRLRKLASDQYDALILAAAGLRRLGLWDG 183 Query: 185 IK---------EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 L+ P+ QG + +ET ++ LV ++ + ERA Sbjct: 184 TPGASIGAALVYPLDPSVMLPAVAQGILAVETRTDDETTNRLVAALDDSAARTAALAERA 243 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 FL L+G C+ +A A + L+F G+V A DG + G+ +G A+ Sbjct: 244 FLRRLEGGCQIPVAAHAVLTEAGLHFRGMVGALDGSTLVFAEQVGDPAQPEAVGIAVAEA 303 Query: 296 IRFISNKNVF 305 + + + Sbjct: 304 VLAQGGEAIL 313 >gi|149921672|ref|ZP_01910121.1| porphobilinogen deaminase [Plesiocystis pacifica SIR-1] gi|149817516|gb|EDM76986.1| porphobilinogen deaminase [Plesiocystis pacifica SIR-1] Length = 322 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 105/307 (34%), Positives = 159/307 (51%), Gaps = 4/307 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LAL A R L+ + ++ + TKGDR+T+R L ++GG GL Sbjct: 9 RKLRLGTRGSALALWQANMIRDRLLAAWGAQGLEVELVRVVTKGDRVTDRPLNQVGGMGL 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK--DL 121 F + +E KL++GEID AVHS KDMP L +GL +++ R D RD F++ + + L Sbjct: 69 FVKGLEDKLLAGEIDFAVHSMKDMPGTLPEGLTLASTPERADPRDAFLAAPGRDVTLATL 128 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 S +GTSSLRR AL R + ++ RG + TR+ K+ + A+LLA AG+ RL K Sbjct: 129 PAGSRLGTSSLRRGALAKRINPGLEIVPIRGNVPTRMGKIAEGEVDAVLLAAAGLDRLGK 188 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I E L+ + F P+ QG + IE + L + + H T ER++LA L Sbjct: 189 GEAITERLDPDAFMPAACQGVLAIELRAADTDIAALFEPLGHGPTSIVAAAERSYLATLQ 248 Query: 242 GSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G C+ +A A G + G+V+ DG + G DA +G A+ + Sbjct: 249 GGCQVPLACHARLSEDGRRVRVEGLVVEPDGSTVYASEAEGPVADAAQLGAGVAREVLAA 308 Query: 300 SNKNVFN 306 + V + Sbjct: 309 GGQGVID 315 >gi|296162267|ref|ZP_06845062.1| porphobilinogen deaminase [Burkholderia sp. Ch1-1] gi|295887534|gb|EFG67357.1| porphobilinogen deaminase [Burkholderia sp. Ch1-1] Length = 332 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 164/303 (54%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 12 TLVIASRESRLAMWQAEHVRCALHKLY--PSCDVKILGMTTRGDQILDRTLSKVGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G +S + RED RD +S+T SL L Sbjct: 70 VKELEAALADGRADLAVHSLKDVPMALPEGFALSTIMEREDPRDALVSNTYDSLAALPEG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL + Sbjct: 130 AVVGTSSLRREAMLRMRYPHLEVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLGER 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+ ED P+ GQGA+ IE + + ++HE T +V ER L GSC Sbjct: 190 IRALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHEHTAAAVEAERMVSRALGGSC 249 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301 + +A +A L+ GIV DG+ + AI +G++ A + Sbjct: 250 EVPLAAYATWHDGALHLRGIVATPDGQRVLSAQASAPATSVEQAIALGQEVASALEQQGA 309 Query: 302 KNV 304 + Sbjct: 310 MEI 312 >gi|331270186|ref|YP_004396678.1| porphobilinogen deaminase [Clostridium botulinum BKT015925] gi|329126736|gb|AEB76681.1| porphobilinogen deaminase [Clostridium botulinum BKT015925] Length = 300 Score = 230 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 105/299 (35%), Positives = 153/299 (51%), Gaps = 6/299 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +G+R S LAL + + H P N I +STKGDRI + L +IGGKGLF Sbjct: 2 KIIVGSRGSKLALTQTNWVIDKIKENH--PQVNFEIKIISTKGDRIQHMPLDKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLAL 123 +EIE++LI+G+ID AVHS KDM T + + L+ S RED RDV I + +S+ +L Sbjct: 60 VQEIEEQLINGQIDLAVHSMKDMSTDIPEELKFSYVPVREDYRDVLILNKKYKSIDELPK 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGT S RRK LL +R+D+ ++ RG ++TR+ K+ I+LA AGIKRL E Sbjct: 120 GAKIGTGSKRRKYQLLDYRNDLKIVPIRGNVDTRIKKIETENLDGIVLASAGIKRLGLED 179 Query: 184 VIKE---ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I L + PSP QG + +E + ++K I E + ERAFL + Sbjct: 180 KIDYNIFYLEKDIMLPSPAQGILALEIKRGRKDLENILKSIEDEISTIQAEAERAFLKGV 239 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C I T+ G++ D + G+ +A IG + A+ + Sbjct: 240 NGGCHVPIGALCSINKDTVEVTGLLGKEDASKIVRKTLVGSIDEAEYIGYELAKIVLKE 298 >gi|241663752|ref|YP_002982112.1| porphobilinogen deaminase [Ralstonia pickettii 12D] gi|240865779|gb|ACS63440.1| porphobilinogen deaminase [Ralstonia pickettii 12D] Length = 338 Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 159/305 (52%), Gaps = 6/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LAL A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF Sbjct: 25 KLVIASRESRLALWQAEHVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLF 82 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L +G +S L RED RD F+S+ L L Sbjct: 83 VKELEVALAEGRADLAVHSLKDVPMQLPEGFALSTILEREDPRDAFVSNDYADLASLPAG 142 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A L + + RG ++TRL KL+ AI+LA AG++RL Sbjct: 143 AVVGTSSLRREASLRARFPHLVIQPLRGNLDTRLGKLDRGDYAAIILAAAGLRRLGLADR 202 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + E+ P+ GQGA+ IE + + + + ++ T +V ERA L GSC Sbjct: 203 IRSTIAPEESLPAAGQGALGIEIRADREEVRACLAPLHDAPTALAVTAERAVSRILGGSC 262 Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIRFIS 300 + +A FA G TL V + DG DA +G AQ + Sbjct: 263 QVPLAAFAQWSGAGTLRLRAFVASQDGTRKLAADGEATPSTLADADALGVRVAQQMLAGG 322 Query: 301 NKNVF 305 +++ Sbjct: 323 ARDIL 327 >gi|118101810|ref|XP_417846.2| PREDICTED: similar to Hydroxymethylbilane synthase [Gallus gallus] Length = 358 Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 106/335 (31%), Positives = 152/335 (45%), Gaps = 35/335 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA L + + P I+ +ST GD+I + L++IG K L Sbjct: 16 RAIRVGTRRSQLARIQTDSVVEMLREFY--PDLCFEIVAMSTTGDKILDTALSKIGEKSL 73 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-- 121 FT+E+E L E+D VHS KD+PT L G I A RE+ D + H K L Sbjct: 74 FTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAICKRENPLDAVVFHPKNCGKTLSV 133 Query: 122 -ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 SVIGTSSLRR A L + + D RG + TRL KL+ AI+LA AG+KR+ Sbjct: 134 LPEKSVIGTSSLRRAAQLKKKFPQLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRM 193 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E I ++L+ ED + GQGA+ +E + + +V + +T ERAF+ Sbjct: 194 GWENRIGQLLSPEDCLYAVGQGALAVEVRAKDQETLNMVSALQDGETVLCCIAERAFMKR 253 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD---- 284 L+G C +A K LY G V + DG + + +G D Sbjct: 254 LEGGCSVPVAVNTMLKDGQLYLTGAVYSLDGSDSLKETMQTSVNYPHRNEDGPNDDVQHV 313 Query: 285 --------------AINIGRDAAQYIRFISNKNVF 305 A N+G + A + K++ Sbjct: 314 GITAKNVPGQAQEAAENLGIELASLLLSKGAKHIL 348 >gi|73540406|ref|YP_294926.1| porphobilinogen deaminase [Ralstonia eutropha JMP134] gi|72117819|gb|AAZ60082.1| hydroxymethylbilane synthase [Ralstonia eutropha JMP134] Length = 334 Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 107/304 (35%), Positives = 161/304 (52%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R++L + P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 20 KLVIASRESRLAMWQAEYVRAALQQYY--PACDVSILGMTTRGDQILDRTLSKVGGKGLF 77 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E + G D AVHS KD+P +L G ++A + RED RD +S T SL+++ Sbjct: 78 VKELEFAMAEGRADLAVHSLKDVPMELPDGFALTAVMEREDPRDALVSSTFASLEEMPAG 137 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A L + + RG ++TRL KL+ + AI+LA AG+KRL Sbjct: 138 TVVGTSSLRREAALRARYPHLVIKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGDR 197 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ ++ E P+ GQGA+ IE P + +NH+ T +V ERA L GSC Sbjct: 198 IRALIAPEASLPAAGQGALGIEILSTRPDVAAWLSPLNHQPTALAVTAERAVSRMLGGSC 257 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIRFISN 301 + +A A G L V DG S G D A +G AA+ + Sbjct: 258 QVPLAAHARWVGDQLRLDAFVAMPDGSRQTRASAAGLVVDAAAAEALGASAARDLLSQGA 317 Query: 302 KNVF 305 + Sbjct: 318 AEIL 321 >gi|182677009|ref|YP_001831155.1| porphobilinogen deaminase [Beijerinckia indica subsp. indica ATCC 9039] gi|182632892|gb|ACB93666.1| porphobilinogen deaminase [Beijerinckia indica subsp. indica ATCC 9039] Length = 337 Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 132/305 (43%), Positives = 171/305 (56%), Gaps = 5/305 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR SPLALA A E L H + I + T GD I +R L+ GGKGLFT Sbjct: 19 LRLGTRGSPLALAQAHELADRLARAHGFAKEAVAITIIRTSGDMIQDRPLSLAGGKGLFT 78 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+++ LI G +D AVHSAKD+PT L + L I+ YLPRED+RDV+IS A +DL S Sbjct: 79 KELDQALIEGMVDLAVHSAKDLPTILPEDLIIAGYLPREDVRDVWISPKAGHPRDLPPGS 138 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GT+SLRR ALL R R D+ V RG +ETRL KL + A LLA AG++RL Sbjct: 139 VVGTASLRRGALLKRLRPDLEVRLLRGNVETRLAKLAAGEVDATLLALAGLRRLGLADKA 198 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++L IEDF P+ GQGAI I T ++ L+ I T ++ ER FL LDGSCK Sbjct: 199 TQVLAIEDFLPAAGQGAIGITTRRDDAATLALLAPILDPATHVALAAERGFLTVLDGSCK 258 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-----AINIGRDAAQYIRFIS 300 + I A + + GIVL DG + E +G A +G AA+ I Sbjct: 259 TPIGAHATVEHDQVTLRGIVLRPDGSEWFEACESGPLESGSLEAARELGETAARAILARL 318 Query: 301 NKNVF 305 + F Sbjct: 319 PEGFF 323 >gi|87117998|gb|ABD20306.1| HemC [Shigella dysenteriae] gi|87118030|gb|ABD20322.1| HemC [Shigella flexneri] gi|87118032|gb|ABD20323.1| HemC [Shigella flexneri] Length = 272 Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 99/267 (37%), Positives = 147/267 (55%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTR 185 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300 R G DA +G A+ + Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272 >gi|198284968|ref|YP_002221289.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666388|ref|YP_002427653.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC 23270] gi|226740625|sp|B7JBH8|HEM3_ACIF2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226740626|sp|B5ERN6|HEM3_ACIF5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|198249489|gb|ACH85082.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518601|gb|ACK79187.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 306 Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 108/284 (38%), Positives = 158/284 (55%), Gaps = 4/284 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLA+ A R++L+ +H P + II ++T GD + + L +GGKGLF Sbjct: 5 LRIGTRASPLAVWQAEHVRAALLRLH--PGMAVEIITMTTSGDVLLDAPLHALGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L +D AVHS KD+P GL+I A + RED+RD F+S+T L + Sbjct: 63 KEIEDALQQRRVDVAVHSMKDVPALQPDGLEIVAIMAREDVRDAFVSNTFLHPDALPEGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G+SSLRR+A LL + V D RG + TRL +L+ AI+LA AG+KRL I Sbjct: 123 RVGSSSLRRRAQLLERYPHLRVEDLRGNVATRLRRLDEGHYDAIILAAAGLKRLGLPDRI 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +L+I+ P+ GQGAI IE ++ + +EL+ + DT + V ER+ L G C+ Sbjct: 183 THLLDIDRSLPAVGQGAIGIEARSDDRRTRELLAPLADADTQNCVLAERSMNQVLGGDCR 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 +A A +G + G+V DG+ G+ D + +G Sbjct: 243 LPVAALARWQGPQMLLRGLVATPDGRRVLHAEAKGS--DPVALG 284 >gi|314933825|ref|ZP_07841190.1| hydroxymethylbilane synthase [Staphylococcus caprae C87] gi|313653975|gb|EFS17732.1| hydroxymethylbilane synthase [Staphylococcus caprae C87] Length = 309 Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 173/305 (56%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L V P +I I + TKGD+I ++ L+++GGKG Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIYKLKKV--DPDLDIEIKEIVTKGDQIVDKQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L + EID A+HS KD+P+ + +GL + RE D +IS L +L Sbjct: 59 LFVKEIQNELFNKEIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHTPLSELT 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S++GTSSLRR A +L + + RG I+TRL KL AI+LA AG+KR+ Sbjct: 119 EGSIVGTSSLRRGAQILSKYPHLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ L+ + P+ GQGA+ IE ++ + EL+K ++++D V ER FL+E+D Sbjct: 179 DDIVTTYLDKDVLLPAIGQGALGIECRSDDKELLELLKKVHNQDVAQCVTAERTFLSEMD 238 Query: 242 GSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ I G+A G + F G+++ DGK +E + G D + +G++ ++ ++ Sbjct: 239 GSCQVPIGGYATIDGDKQIEFTGLIMTPDGKERYEHTAKG--LDPVELGQEVSRVLKEQG 296 Query: 301 NKNVF 305 + Sbjct: 297 AYEII 301 >gi|118444575|ref|YP_878763.1| porphobilinogen deaminase [Clostridium novyi NT] gi|189028087|sp|A0Q2B1|HEM3_CLONN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|118135031|gb|ABK62075.1| porphobilinogen deaminase [Clostridium novyi NT] Length = 300 Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 104/299 (34%), Positives = 157/299 (52%), Gaps = 6/299 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +G+R S LAL + + P + +STKGDRI + L +IG KGLF Sbjct: 2 KIVVGSRGSKLALTQTNWVIDKIKQKY--PQIQFEVKIISTKGDRIQHIALDKIGDKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-AL 123 +EIE++LISG+ID AVHS KDM T++ + L+ S RED RDV I + + D + Sbjct: 60 VKEIEEQLISGDIDMAVHSMKDMSTEMPEELKFSYVPKREDYRDVLILNKKYNSIDELPM 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++ IGT S RRK LL++R D++++ RG +ETR+NK+ H ++LA AGIKRL ++ Sbjct: 120 NAKIGTGSKRRKYQLLQYRDDLNIVPIRGNVETRINKIEMENLHGVVLASAGIKRLNIQE 179 Query: 184 VIKE---ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + LN + PSP QG + +E + +E++K I +++ ERAFL + Sbjct: 180 KLDYNIFYLNEDIMLPSPAQGILALEIRKDREDLEEILKSIEDKNSSIQAVAERAFLKGV 239 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C I + G++ DG S G DA IG + A+ + Sbjct: 240 NGGCHVPIGAICNINKDNVELTGLLGKEDGSKIIRKSLGGKIEDAEKIGYELAEIVLKE 298 >gi|87118000|gb|ABD20307.1| HemC [Shigella dysenteriae] gi|87118002|gb|ABD20308.1| HemC [Shigella dysenteriae] gi|87118004|gb|ABD20309.1| HemC [Shigella dysenteriae] Length = 272 Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 98/267 (36%), Positives = 147/267 (55%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L + P+ GQGA+ IE +++ + Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPDISLPAVGQGAVGIECRLDDAR 185 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300 R G DA +G A+ + Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272 >gi|258424087|ref|ZP_05686969.1| porphobilinogen deaminase [Staphylococcus aureus A9635] gi|257845708|gb|EEV69740.1| porphobilinogen deaminase [Staphylococcus aureus A9635] Length = 308 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 168/305 (55%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKG Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L +L Sbjct: 59 LFVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ Sbjct: 119 EGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+D Sbjct: 179 DDIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMD 238 Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++ Sbjct: 239 GSCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKKVSNKLKEQG 296 Query: 301 NKNVF 305 + Sbjct: 297 AYEII 301 >gi|254247511|ref|ZP_04940832.1| Porphobilinogen deaminase [Burkholderia cenocepacia PC184] gi|124872287|gb|EAY64003.1| Porphobilinogen deaminase [Burkholderia cenocepacia PC184] Length = 334 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 109/303 (35%), Positives = 165/303 (54%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 76 VKELEAALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAG 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E Sbjct: 136 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC Sbjct: 196 IRALLDVEASPPAAGQGALGIEIAAHRDDVAAWLASLHDPQTALAVEAERMVSRALGGSC 255 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + +A A + LY G V +DGK G DA+ +GR + + Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGA 315 Query: 302 KNV 304 ++ Sbjct: 316 LDI 318 >gi|66773161|ref|NP_001019559.1| hydroxymethylbilane synthase, b [Danio rerio] gi|63101908|gb|AAH95373.1| Hydroxymethylbilane synthase, b [Danio rerio] Length = 360 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 114/337 (33%), Positives = 158/337 (46%), Gaps = 37/337 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA L +++ P I+ +ST GD+I + L++IG K L Sbjct: 16 RVIRVGTRKSQLARIQTDSVVEKLKELY--PDVLFEIVAMSTTGDKILDTALSKIGEKSL 73 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKD 120 FT+E+E L E+D VHS KD+PT L G I A L RE+ D + H + L Sbjct: 74 FTKELENALEKNEVDLVVHSLKDLPTVLPAGFTIGAVLKRENPHDAVVLHPKNKGKRLDS 133 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKRL 179 L+ SVIGTSSLRR A L + + D RG + TRL KL+ NN AI+LA AG+KR+ Sbjct: 134 LSNKSVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDENNDFSAIILAAAGLKRM 193 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E I +IL ED + GQGA+ +E + E+V V+N DT S ERAFL Sbjct: 194 GWENRISQILGPEDCMYAVGQGALAVEVRARDLDILEMVSVLNDSDTALSCIAERAFLKH 253 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR--------------------- 278 L+G C +A + K S LY G V + DG + + Sbjct: 254 LEGGCSVPVAVHSEVKNSQLYLTGAVYSLDGSDSLKETMQTSFNPDTQAEEQEKVDEKVQ 313 Query: 279 ----------NGNRCDAINIGRDAAQYIRFISNKNVF 305 + A+ +G D + K + Sbjct: 314 RVGITALKVAEAAQDAAMKLGVDLGNLLLSKGAKEIL 350 >gi|221124344|ref|XP_002162635.1| PREDICTED: similar to hydroxymethylbilane synthase a [Hydra magnipapillata] Length = 450 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 103/296 (34%), Positives = 161/296 (54%), Gaps = 8/296 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 F I TR S LAL A ++ L ++ ++ ++TKGD+I +R+L+++GGKGLF Sbjct: 150 TFTIATRESRLALWQAEHVKALLEQ----SGASVSLLGMTTKGDQILDRSLSKVGGKGLF 205 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G ++ + RED D ++S T S+ DL Sbjct: 206 VKELEVALEDGRADLAVHSLKDVPMELPDGFALACVMEREDPWDAWVSGTYASVMDLPKG 265 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR ALL R D+ + RG ++TRL KL++ I+LA AG+KRL E Sbjct: 266 AVVGTSSLRRVALLRAIRPDLKIEPLRGNLDTRLRKLDDGLYDGIVLAAAGLKRLGLESR 325 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + E P+ GQGA+ IE + ++ + H+ TW +V+ ERA + GSC Sbjct: 326 IRAVFEPEQMLPAAGQGALGIEVRAGRQDVEAALQHLVHQPTWLAVSAERAVSRMMGGSC 385 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNG---NRCDAINIGRDAAQYI 296 +A +A G L+ ++G + +G + +A +G A+ + Sbjct: 386 SMPLAAYATISGDELHIRAAWGDAEGIQPVVYARASGLAKDAPEATALGEQVARDL 441 >gi|87117964|gb|ABD20289.1| HemC [Shigella boydii] gi|87117966|gb|ABD20290.1| HemC [Shigella boydii] gi|87117982|gb|ABD20298.1| HemC [Shigella boydii] gi|87117986|gb|ABD20300.1| HemC [Shigella boydii] gi|87117990|gb|ABD20302.1| HemC [Shigella boydii] gi|87117994|gb|ABD20304.1| HemC [Shigella boydii] gi|87118012|gb|ABD20313.1| HemC [Shigella dysenteriae] Length = 272 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 99/267 (37%), Positives = 147/267 (55%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 185 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300 R G DA +G A+ + Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272 >gi|87117974|gb|ABD20294.1| HemC [Shigella boydii] gi|87117976|gb|ABD20295.1| HemC [Shigella boydii] gi|87117978|gb|ABD20296.1| HemC [Shigella boydii] gi|87117980|gb|ABD20297.1| HemC [Shigella boydii] gi|87117984|gb|ABD20299.1| HemC [Shigella boydii] gi|87117988|gb|ABD20301.1| HemC [Shigella boydii] gi|87117992|gb|ABD20303.1| HemC [Shigella boydii] gi|87117996|gb|ABD20305.1| HemC [Shigella boydii] gi|87118006|gb|ABD20310.1| HemC [Shigella dysenteriae] gi|87118010|gb|ABD20312.1| HemC [Shigella dysenteriae] gi|87118016|gb|ABD20315.1| HemC [Shigella dysenteriae] gi|87118020|gb|ABD20317.1| HemC [Shigella dysenteriae] gi|87118036|gb|ABD20325.1| HemC [Shigella flexneri] gi|87118042|gb|ABD20328.1| HemC [Escherichia coli] gi|87118044|gb|ABD20329.1| HemC [Escherichia coli] Length = 272 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 99/267 (37%), Positives = 147/267 (55%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 185 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300 R G DA +G A+ + Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272 >gi|291277466|ref|YP_003517238.1| porphobilinogen deaminase [Helicobacter mustelae 12198] gi|290964660|emb|CBG40515.1| porphobilinogen deaminase [Helicobacter mustelae 12198] Length = 315 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 105/311 (33%), Positives = 155/311 (49%), Gaps = 9/311 (2%) Query: 1 MEK--KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M K + IGTR S LAL A L + + T+GDR+ + L +I Sbjct: 1 MSKQNRQIIIGTRGSALALWQAEYIAMRLKKEL---GIESRLQIVKTQGDRMLDVPLAKI 57 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLFT+E+EK L+ +ID AVHS KD+P + ++GL ++ RED+RD F+S S+ Sbjct: 58 GGKGLFTKELEKLLLQEKIDIAVHSLKDVPVEFVEGLDLACITKREDVRDCFLSVRYASI 117 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 DL + +GT+SLRR L R D+ RG ++TRL +L + + AI+LA AG+ R Sbjct: 118 LDLPPGARVGTTSLRRSMQLKILRKDLDTQSLRGNVQTRLKRLFDGEFDAIILAQAGLNR 177 Query: 179 LKKEKVIKEILNI---EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 L ++ L E+ P+ GQGA+ IE L++ +N E T N ER Sbjct: 178 LGIDQQKVPFLKPFSTEELIPAMGQGALGIEAR-EGDGIFSLLQGLNDEATAICTNAERT 236 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 F+ LDG C+ I A C + I+ DG S +G+ D+I + + A+ Sbjct: 237 FIRVLDGGCQVPIGVHAQCNNQDFVIHAILGLPDGSKVLRDSISGSTKDSILLAENLAER 296 Query: 296 IRFISNKNVFN 306 + Sbjct: 297 FLSQGALEILE 307 >gi|206560969|ref|YP_002231734.1| porphobilinogen deaminase [Burkholderia cenocepacia J2315] gi|238058732|sp|B4E8C4|HEM3_BURCJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|198037011|emb|CAR52932.1| putative porphobilinogen deaminase protein [Burkholderia cenocepacia J2315] Length = 334 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 109/303 (35%), Positives = 165/303 (54%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 76 VKELEAALADGRADLAVHSLKDVPMALPDGFALAAIMEREDPRDAFVSNDYASLDALPAG 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL KL+ AI+LA AG+KRL E Sbjct: 136 AVVGTSSLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++E PP+ GQGA+ IE + + ++ T +V ER L GSC Sbjct: 196 IRALLDVEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPRTALAVEAERMVSRALGGSC 255 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + +A A + LY G V +DGK G DA+ +GR + + Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTAEECGAVMTVADALALGRAVSDELEAQGA 315 Query: 302 KNV 304 ++ Sbjct: 316 LDI 318 >gi|238028332|ref|YP_002912563.1| Porphobilinogen deaminase [Burkholderia glumae BGR1] gi|237877526|gb|ACR29859.1| Porphobilinogen deaminase [Burkholderia glumae BGR1] Length = 322 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 158/305 (51%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL +L Sbjct: 71 VKELETALADGRADLAVHSLKDVPMSLPEGFALTAVMRREDPRDAFVSNDYASLDELPTG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S++GTSSLRR+A+L DI V RG ++TRL KL+ AI+LA AG+KRL + Sbjct: 131 SIVGTSSLRREAMLRARYLDIDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLDAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ ++ +E PP+ GQGA+ IE + + ++ T + ER L GSC Sbjct: 191 IRSLIEVEASPPAAGQGALGIEIAAARAELARWLAPLHDPATALACEAERMVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + +A A G L G V G A+ +GR A + Sbjct: 251 EVPLAAHAVWDGDVLQLTGRVSNPSGTRVLNARARAAVSTPDAALALGRQVADELARQGA 310 Query: 302 KNVFN 306 + Sbjct: 311 FEIVE 315 >gi|82751259|ref|YP_417000.1| porphobilinogen deaminase [Staphylococcus aureus RF122] gi|123727415|sp|Q2YTB9|HEM3_STAAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|82656790|emb|CAI81219.1| Porphobilinogen deaminase [Staphylococcus aureus RF122] Length = 308 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 168/305 (55%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKG Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L Sbjct: 59 LFVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ Sbjct: 119 EGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ L+I+ P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+D Sbjct: 179 DDIVTSYLDIDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMD 238 Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++ Sbjct: 239 GSCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKKVSNKLKEQG 296 Query: 301 NKNVF 305 + Sbjct: 297 AYEII 301 >gi|187923070|ref|YP_001894712.1| porphobilinogen deaminase [Burkholderia phytofirmans PsJN] gi|238058734|sp|B2T1D1|HEM3_BURPP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|187714264|gb|ACD15488.1| porphobilinogen deaminase [Burkholderia phytofirmans PsJN] Length = 342 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 105/303 (34%), Positives = 166/303 (54%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 12 TLVIASRESRLAMWQAEHVRCALHKLY--PSCDVKILGMTTRGDQILDRTLSKVGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G +S + RED RD +S+ SL L Sbjct: 70 VKELEAALADGRADLAVHSLKDVPMELPAGFALSTIMEREDPRDALVSNDYDSLAALPAG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL+KL+ AI+LA AG+KRL + Sbjct: 130 AVVGTSSLRREAMLRMRYPHLEVRPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLGER 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+ ED P+ GQGA+ IE + + ++H+ T +V ER L GSC Sbjct: 190 IRALLDPEDSLPAAGQGALGIEIRADRADLAAWLAPLHHDHTAAAVEAERMVSRALGGSC 249 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301 + +A +A + L+ GIV DG+ + A+ +G++ A + Sbjct: 250 EVPLAAYATWRDGALHLRGIVATPDGQRVLSAQASAPAPSVERAVALGQEVASALEQQGA 309 Query: 302 KNV 304 ++ Sbjct: 310 MDI 312 >gi|87117968|gb|ABD20291.1| HemC [Shigella boydii] Length = 272 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 100/267 (37%), Positives = 147/267 (55%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 I TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 126 IGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 185 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300 R G DA +G A+ + Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272 >gi|256827644|ref|YP_003151603.1| porphobilinogen deaminase [Cryptobacterium curtum DSM 15641] gi|256583787|gb|ACU94921.1| porphobilinogen deaminase [Cryptobacterium curtum DSM 15641] Length = 313 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 100/312 (32%), Positives = 153/312 (49%), Gaps = 8/312 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K IGTR S LAL A + R+ + P + + + TKGD+I + L++IG Sbjct: 1 MTDKTITIGTRGSKLALWQAEKVRALIQA--TFPEVHCAVKVIRTKGDKILDVALSKIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-SLK 119 KGLFT+E+E+ L+ GE+D VHS KDMPT L KGL I+ R DV ++ +L Sbjct: 59 KGLFTKELERCLLEGEVDVCVHSMKDMPTVLPKGLFIAGVTERAYPNDVIVASAKGLTLS 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL + + T SLRR A L R R D++ + RG I+TR+ ++ + A +LA AG+ RL Sbjct: 119 DLPAGARVATGSLRRVAQLARLRPDVTACEIRGNIDTRIGRVLAGEFDAAILAAAGLYRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E+ I ++ E+ P+ GQGAI +E ++ + L I+H+ T +V ER + Sbjct: 179 GLEEQISSLIPTEEMIPAVGQGAIALEARADDREVAHLCTAISHQPTLRAVEAERYIMRA 238 Query: 240 LDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 L+G C+ + +A ++ V DG F + AI Sbjct: 239 LEGGCQVPMGAYATESEDEQGRRMIHIDAFVATLDGTRFLRAQASTPVDQAIEAAGKIVD 298 Query: 295 YIRFISNKNVFN 306 + + Sbjct: 299 DLVSQGATEILE 310 >gi|87118008|gb|ABD20311.1| HemC [Shigella dysenteriae] gi|87118014|gb|ABD20314.1| HemC [Shigella dysenteriae] Length = 272 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 99/267 (37%), Positives = 146/267 (54%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE + + + Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLGDAR 185 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300 R G DA +G A+ + Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272 >gi|118594154|ref|ZP_01551501.1| porphobilinogen deaminase [Methylophilales bacterium HTCC2181] gi|118439932|gb|EAV46559.1| porphobilinogen deaminase [Methylophilales bacterium HTCC2181] Length = 305 Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats. Identities = 102/302 (33%), Positives = 160/302 (52%), Gaps = 2/302 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K I +R SPLA+ A ++ L +++ P +I I T+GD I +++L IGGKGL Sbjct: 3 KKITIASRESPLAMWQAEHIKTQLNNLY--PYLSIYIKGFKTQGDIILDQSLATIGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ L+ E D AVHS KD+P + + Q+SA RED RD FIS +SL D+ Sbjct: 61 FIKELEQALLKKEADLAVHSMKDLPMDIYEDFQLSAITAREDPRDAFISLKYKSLDDMPD 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR++ + + + RG ++TRL+KL + AI+LA AG+ RL + Sbjct: 121 GAIVGTSSLRRQSQIKAKYPSLIIEPLRGNLQTRLSKLKKGQYGAIILAAAGLIRLDLQD 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I ++ P+ GQGA+ IE +N + L+K +N +DT V ER L GS Sbjct: 181 QITMYIDKNVSIPAVGQGALGIEILSSNTELDLLLKPLNDDDTSRCVLAERMVSRSLAGS 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C + A+ + + G V + +G+ G + D +G +Q + K Sbjct: 241 CTVPLGAHAFINKNAMVINGFVASPNGEKIIHAEMKGVKADFYKLGESLSQLLIDQGAKT 300 Query: 304 VF 305 + Sbjct: 301 LL 302 >gi|66809519|ref|XP_638482.1| porphobilinogen deaminase [Dictyostelium discoideum AX4] gi|74854142|sp|Q54P93|HEM3_DICDI RecName: Full=Porphobilinogen deaminase; AltName: Full=Heme biosynthesis protein C; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS gi|60467077|gb|EAL65118.1| porphobilinogen deaminase [Dictyostelium discoideum AX4] Length = 325 Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats. Identities = 95/316 (30%), Positives = 158/316 (50%), Gaps = 14/316 (4%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++ IG+R S LA+ R + +++ P + I + T GD++ + +L++IG K Sbjct: 6 KRDKVIIGSRKSQLAMLQTEWVRDRIQELN--PGIIVEIKTMDTTGDKVLDVSLSKIGDK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT+E+E +++G ID AVHS KD+PTKL GL++ A R + D FI++ + K+ Sbjct: 64 GLFTKELEDMMLNGTIDLAVHSLKDIPTKLPDGLKLGAITKRYNTSDAFIANAKKHGKNC 123 Query: 122 -----ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYA 174 ++IG+SSLRR A L + + D RG + TR KL ++N ++LA A Sbjct: 124 KLSELPQGAMIGSSSLRRVAQLKKAYPHLQFKDIRGNLNTRFKKLEDDSNGYDGMILAVA 183 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G++R++ I EI+ + GQG++ IE + Q ++ + H ++ ER Sbjct: 184 GLERMELTDHISEIIPDSISLYAVGQGSLGIECKDGDDFIQSILNPLIHRESMYCCEAER 243 Query: 235 AFLAELDGSCKSAIAGFAYCK-----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 + L +L+G C I TL IVL DG + E G +G Sbjct: 244 SMLRDLEGGCHVPIGVVTKLHNQSQPDETLEINAIVLNLDGSKYIESKIIGPSIQYYQLG 303 Query: 290 RDAAQYIRFISNKNVF 305 + AQ + +K++ Sbjct: 304 KSIAQDLINKGSKDIL 319 >gi|300690776|ref|YP_003751771.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Ralstonia solanacearum PSI07] gi|299077836|emb|CBJ50474.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Ralstonia solanacearum PSI07] Length = 334 Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats. Identities = 104/304 (34%), Positives = 158/304 (51%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF Sbjct: 22 LVIASRESRLAMWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLFV 79 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P +L G + L RED RD F+S+ L L + Sbjct: 80 KELEVALAEGRADLAVHSLKDVPMELPAGFALPTILEREDPRDAFVSNHYADLAALPAGA 139 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+A L + + RG ++TRL+KL+ AI+LA AG+KRL + I Sbjct: 140 VVGTSSLRREASLRARFPHLVIQPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLSERI 199 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ E P+ GQGA+ IE + P Q + ++H T +V ERA L GSC+ Sbjct: 200 RAVIAPEASLPAAGQGALGIEIRADRPDVQAWLAPLHHAPTALAVTAERAVSRRLGGSCQ 259 Query: 246 SAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIRFISN 301 +A FA L V + DG+ +A +G AQ + Sbjct: 260 VPLAAFAQWTDDGALRLRAFVASQDGRRKLAAEGETTPATLAEAEALGARVAQQMLDGGA 319 Query: 302 KNVF 305 ++ Sbjct: 320 HDIL 323 >gi|57650542|ref|YP_186555.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus COL] gi|87160322|ref|YP_494312.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195475|ref|YP_500279.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221776|ref|YP_001332598.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus str. Newman] gi|161509889|ref|YP_001575548.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142579|ref|ZP_03567072.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253732321|ref|ZP_04866486.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253734545|ref|ZP_04868710.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus TCH130] gi|258451815|ref|ZP_05699837.1| porphobilinogen deaminase [Staphylococcus aureus A5948] gi|262048646|ref|ZP_06021529.1| porphobilinogen deaminase [Staphylococcus aureus D30] gi|262052244|ref|ZP_06024449.1| porphobilinogen deaminase [Staphylococcus aureus 930918-3] gi|282920211|ref|ZP_06327936.1| porphobilinogen deaminase [Staphylococcus aureus A9765] gi|284024719|ref|ZP_06379117.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 132] gi|294848692|ref|ZP_06789438.1| porphobilinogen deaminase [Staphylococcus aureus A9754] gi|304380738|ref|ZP_07363407.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|11386773|sp|O34090|HEM3_STAA8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|71152114|sp|Q5HFA2|HEM3_STAAC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123749605|sp|Q2FG66|HEM3_STAA3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|172048933|sp|A6QHK4|HEM3_STAAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189028161|sp|A8Z2J1|HEM3_STAAT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|2589181|gb|AAC45833.1| porphobilinogen deaminase [Staphylococcus aureus] gi|57284728|gb|AAW36822.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus COL] gi|87126296|gb|ABD20810.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203033|gb|ABD30843.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374576|dbj|BAF67836.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus str. Newman] gi|160368698|gb|ABX29669.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253723959|gb|EES92688.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253727486|gb|EES96215.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus TCH130] gi|257860527|gb|EEV83353.1| porphobilinogen deaminase [Staphylococcus aureus A5948] gi|259159845|gb|EEW44884.1| porphobilinogen deaminase [Staphylococcus aureus 930918-3] gi|259163293|gb|EEW47852.1| porphobilinogen deaminase [Staphylococcus aureus D30] gi|269941151|emb|CBI49538.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus TW20] gi|282594559|gb|EFB99544.1| porphobilinogen deaminase [Staphylococcus aureus A9765] gi|294824718|gb|EFG41141.1| porphobilinogen deaminase [Staphylococcus aureus A9754] gi|302751497|gb|ADL65674.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340737|gb|EFM06668.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315198635|gb|EFU28963.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus CGS01] gi|320140451|gb|EFW32305.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MRSA131] gi|320143989|gb|EFW35758.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MRSA177] gi|329314344|gb|AEB88757.1| Porphobilinogen deaminase [Staphylococcus aureus subsp. aureus T0131] gi|329728357|gb|EGG64794.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus 21189] gi|329733184|gb|EGG69521.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus 21193] Length = 308 Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 168/305 (55%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKG Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L Sbjct: 59 LFVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ Sbjct: 119 EGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+D Sbjct: 179 DDIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMD 238 Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ IAG+A + + F G+++ DGK E + NG D + +G+ + ++ Sbjct: 239 GSCQVPIAGYATISDQNEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKTVSNKLKEQG 296 Query: 301 NKNVF 305 + Sbjct: 297 AYEII 301 >gi|293374464|ref|ZP_06620786.1| hydroxymethylbilane synthase [Turicibacter sanguinis PC909] gi|292646843|gb|EFF64831.1| hydroxymethylbilane synthase [Turicibacter sanguinis PC909] Length = 301 Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats. Identities = 105/295 (35%), Positives = 157/295 (53%), Gaps = 3/295 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LAL L H P + + TKGD I + +L +IG KGLF Sbjct: 3 VVVGTRGSKLALTQTQWVIDQLRKYH--PEVEFEVKIIKTKGDLIQHVSLDKIGDKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124 EIE++L+ EID AVHS KDMP+KL KGL+ +A RED RDV I ++L+DL Sbjct: 61 REIEQQLLDKEIDIAVHSMKDMPSKLPKGLKFAAVPKREDPRDVLILKDGYKTLEDLPKG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGT S RRK LL++R D+ ++ RG I+TR+ K+ + I+LA AGI R ++ Sbjct: 121 AKIGTGSKRRKYQLLKYRPDLDILSIRGNIDTRIRKIEDENLDGIVLAAAGILRAGMSEM 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + ++ P+P QGA+ I+ + + + L++ I +T V ERAFLA ++G C Sbjct: 181 ISSYIPVDIMVPAPAQGALAIQIREADLEIEALIESIKDVETEIRVAAERAFLAGVNGGC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + + +G L G+ + +G G I +G + AQ++ Sbjct: 241 HIPMGAYCELEGDKLKLTGLYGSENGNCLVRKCLEGGIESPIELGLEVAQFVLKE 295 >gi|302388903|ref|YP_003824724.1| hydroxymethylbilane synthase [Thermosediminibacter oceani DSM 16646] gi|302199531|gb|ADL07101.1| hydroxymethylbilane synthase [Thermosediminibacter oceani DSM 16646] Length = 299 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 105/293 (35%), Positives = 167/293 (56%), Gaps = 5/293 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+G+R S LAL L D + P ++ + T+GD++ + L++ GGKG+ Sbjct: 6 RIVRVGSRESRLALVQTEIVIRLLKD--RRPELEFEVVKIKTQGDKLLDVNLSDAGGKGV 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L++G ID AVHS KD+P +L +GL I+A RED RDV IS + L +L Sbjct: 64 FVKEIEEALLAGSIDLAVHSMKDVPYELPEGLCIAAVTEREDPRDVLISRDKRRLLNLRP 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSSLRR L R D+ ++ RG + TR+ K+++ + ++LA AGIKRL E+ Sbjct: 124 GARIGTSSLRRSVQLKALRPDLDIVPVRGNVPTRIRKMDDLELDGLVLAAAGIKRLGLEE 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 +I E E P+ GQGA+ +E + EL +++H+ T +V ER+F+ L GS Sbjct: 184 LIAEYFPPEVIVPAVGQGALAVEAR-KDDDILELAGLVSHKATEVAVRAERSFMRALGGS 242 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C+ + FA +G+ + G+V +G + + +G +A IG A+ + Sbjct: 243 CRVPLGAFARVEGTVVTLVGMV-EKNGS-VCKGTMSGKLKEAEEIGLRLAERL 293 >gi|289550573|ref|YP_003471477.1| Porphobilinogen deaminase [Staphylococcus lugdunensis HKU09-01] gi|289180105|gb|ADC87350.1| Porphobilinogen deaminase [Staphylococcus lugdunensis HKU09-01] Length = 310 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 171/305 (56%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L +++ P I I + TKGD+I ++ L+++GGKG Sbjct: 1 MRKLVVGSRRSKLALTQSKQFIDKLKEIN--PDLEIEIKEIVTKGDQILDKQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L + EID A+HS KD+P+ L +GL + RE+ D +I+ L L Sbjct: 59 LFVKEIQHELFNKEIDFAIHSLKDVPSILPEGLTLGCIPDRENPFDAYIAKNHTPLDQLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S+IGTSSLRR A +L ++ + RG I+TRL+KL AI+LA AG+KR+ Sbjct: 119 DGSIIGTSSLRRGAQILAKYPNLEIKWIRGNIDTRLHKLETENYDAIILAAAGLKRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ L+ + P+ GQGA+ IE ++ + L+K ++++ D V ER FLA +D Sbjct: 179 DDIVTTYLDKDVLLPAIGQGALGIECRSDDVELLALLKQVHNQQVADCVTAERTFLAAMD 238 Query: 242 GSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ I G+A K + F G+++ DGK +E + +G + I +G + + Sbjct: 239 GSCQVPIGGYAMNKPNGDIEFTGLIMTPDGKERYEHTESG--NNPIELGNKVSDVLIEQG 296 Query: 301 NKNVF 305 + Sbjct: 297 AYEII 301 >gi|315658068|ref|ZP_07910940.1| hydroxymethylbilane synthase [Staphylococcus lugdunensis M23590] gi|315496397|gb|EFU84720.1| hydroxymethylbilane synthase [Staphylococcus lugdunensis M23590] Length = 310 Score = 228 bits (582), Expect = 6e-58, Method: Composition-based stats. Identities = 102/305 (33%), Positives = 169/305 (55%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L +++ P I I + TKGD+I ++ L+++GGKG Sbjct: 1 MRKLVVGSRRSKLALTQSKQFIDKLKEIN--PDLEIEIKEIVTKGDQILDKQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L + EID A+HS KD+P+ L +GL + RE+ D +I+ L L Sbjct: 59 LFVKEIQHELFNKEIDFAIHSLKDVPSILPEGLTLGCIPDRENPFDAYIAKNHTPLDQLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S++GTSSLRR A +L ++ + RG I+TRL+KL AI+LA AG+KR+ Sbjct: 119 DGSIVGTSSLRRGAQILAKYPNLEIKWIRGNIDTRLHKLETENYDAIILAAAGLKRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ L+ + P+ GQGA+ IE ++ + L+ ++++ D V ER FLA +D Sbjct: 179 DDIVTTYLDKDVLLPAIGQGALGIECRSDDVELLALLNQVHNQQVADCVTAERTFLAAMD 238 Query: 242 GSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ I G+A K + F G+++ DGK +E + G + I +G + + Sbjct: 239 GSCQVPIGGYATNKTNGDIEFTGLIMTPDGKERYEHTEIG--NNPIELGNKVSDVLIEQG 296 Query: 301 NKNVF 305 + Sbjct: 297 AYEII 301 >gi|262163679|ref|ZP_06031420.1| porphobilinogen deaminase [Vibrio mimicus VM223] gi|262027895|gb|EEY46559.1| porphobilinogen deaminase [Vibrio mimicus VM223] Length = 271 Score = 228 bits (582), Expect = 6e-58, Method: Composition-based stats. Identities = 97/264 (36%), Positives = 146/264 (55%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 + T+GD I + L ++GGKGLF +E+E ++ G D AVHS KD+P +GL + Sbjct: 1 MVTRGDVILDTPLAKVGGKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICE 60 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 RED RD F+S+T + DL +V+GT SLRR+ L R D+ + + RG + TRL+KL+ Sbjct: 61 REDPRDAFVSNTYAKIDDLPSGAVVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLD 120 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 + AI+LA AG+KRL+ E I+ + E P+ GQGA+ IE +++ + +EL+ +N Sbjct: 121 AGEYDAIILAAAGLKRLELESRIRSFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLN 180 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 H DT D V CERA L G C+ I +A G ++ +V DG G R Sbjct: 181 HTDTADRVRCERAMNLTLQGGCQVPIGSYALLDGDEIWLRALVGEPDGSQIVRGEIRGPR 240 Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306 +A +G A+ + K + Sbjct: 241 SEAEQLGITLAEQLLGQGAKEILE 264 >gi|87118018|gb|ABD20316.1| HemC [Shigella dysenteriae] gi|87118046|gb|ABD20330.1| HemC [Escherichia coli] Length = 272 Score = 228 bits (582), Expect = 7e-58, Method: Composition-based stats. Identities = 98/267 (36%), Positives = 147/267 (55%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDAR 185 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQI 245 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300 R G +A +G A+ + Sbjct: 246 IRGERRGAPQNAEQMGISLAEELLNNG 272 >gi|253680789|ref|ZP_04861592.1| hydroxymethylbilane synthase [Clostridium botulinum D str. 1873] gi|253562638|gb|EES92084.1| hydroxymethylbilane synthase [Clostridium botulinum D str. 1873] Length = 300 Score = 228 bits (581), Expect = 7e-58, Method: Composition-based stats. Identities = 107/298 (35%), Positives = 155/298 (52%), Gaps = 6/298 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G+R S LAL + + P N I +STKGDRI + L +IGGKGLF Sbjct: 3 IVVGSRGSKLALTQTNWVIDKIKQNN--PQLNFEIKIISTKGDRIQHMLLDKIGGKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLALH 124 +EIE++LISG+ID AVHS KDM T + + L+ S RED RDV I + +S+ +L Sbjct: 61 QEIEEQLISGQIDLAVHSMKDMSTDIPEELKFSYVPIREDYRDVLILNKKYKSIDELPKG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGT S RRK LL +R+D+ V+ RG ++TR+ K+ I+LA AGIKRL E Sbjct: 121 AKIGTGSKRRKYQLLDYRTDLKVVPIRGNVDTRIKKIETENLDGIVLASAGIKRLGLEDK 180 Query: 185 IKE---ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I L + PSP QG + +E + ++K I H+ + ERAFL ++ Sbjct: 181 IDYNIFYLEKDIMLPSPAQGILALEIKRGRKDLENILKSIEHKASTIQAEAERAFLKGVN 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G C I +T+ G++ DG + G+ +A +G + A+ I Sbjct: 241 GGCHVPIGALCNINKNTIEVTGLLGKEDGSKIIRKTLVGSIDEAEYVGYELAKIILKE 298 >gi|120437548|ref|YP_863234.1| porphobilinogen deaminase [Gramella forsetii KT0803] gi|117579698|emb|CAL68167.1| porphobilinogen deaminase [Gramella forsetii KT0803] Length = 305 Score = 228 bits (581), Expect = 7e-58, Method: Composition-based stats. Identities = 98/304 (32%), Positives = 164/304 (53%), Gaps = 9/304 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A + +L H ++P+ + GD ++ L E+G Sbjct: 1 MS-KVIRIGTRDSELALWQAKTVQKALEST----GHQTELVPVKSTGDLNLDQPLYEMGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ +I+G++D AVHS KD+PT L KG+ +A + R + +D+ I + L++ Sbjct: 56 TGIFTKTLDVAMINGDVDIAVHSMKDVPTALPKGIVEAAIMKRANSKDLLIHKGVEFLEN 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 I T SLRRKA L + V+D RG + TR+ KLN+N + + A AG++R+ Sbjct: 116 EE--GTIATGSLRRKAQWLHKYPNHKVVDLRGNVNTRMQKLNDNNWNGAIFAAAGLERI- 172 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E + +++ P+P QGA+ I + + + V+NH+++ V+ ER FL L Sbjct: 173 -EIKPENFIDLNWMIPAPAQGAMLIVAMEEDEYCRRALSVLNHKESELCVHVEREFLKTL 231 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C + I A + ++F+G + + DGK EV R+ + ++G++ AQ I Sbjct: 232 EGGCTAPIGALAKILNNHVHFHGALFSLDGKKKMEVERSLPVAEIEDMGKECAQEILKNG 291 Query: 301 NKNV 304 K + Sbjct: 292 GKEL 295 >gi|134296607|ref|YP_001120342.1| porphobilinogen deaminase [Burkholderia vietnamiensis G4] gi|166201499|sp|A4JGV4|HEM3_BURVG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|134139764|gb|ABO55507.1| porphobilinogen deaminase [Burkholderia vietnamiensis G4] Length = 333 Score = 228 bits (581), Expect = 7e-58, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 169/305 (55%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 76 VKELENALADGRADLAVHSLKDVPMALPDGFALAAIMAREDARDAFVSNDYASLDALPAG 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L ++V+ RG ++TRL KL+ AI+LA AG+KRL E Sbjct: 136 AVVGTSSLRREAMLRARYPHLNVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ ++++ED P+ GQGA+ IE + + + ++ T +V ER L GSC Sbjct: 196 IRALIDVEDSLPAAGQGALGIEIAAHRSDVAQWLAPLHDPHTALAVEAERMVSRALGGSC 255 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + +A A + LY G V +DG+ G DA+ +GR + + Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGRRVLSAQACGAVMTAADALALGRAVSDELDAQGA 315 Query: 302 KNVFN 306 +++ N Sbjct: 316 RDIVN 320 >gi|283470938|emb|CAQ50149.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus ST398] Length = 308 Score = 228 bits (581), Expect = 8e-58, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 167/305 (54%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKG Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L Sbjct: 59 LFVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ Sbjct: 119 EGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+D Sbjct: 179 DDIVTSYLDRDTLLPAIGQGALGIECRSDDDELLSLLSKVHNDEVAKCVTAERTFLAEMD 238 Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++ Sbjct: 239 GSCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKTVSNKLKEQG 296 Query: 301 NKNVF 305 + Sbjct: 297 AYEII 301 >gi|295109819|emb|CBL23772.1| hydroxymethylbilane synthase [Ruminococcus obeum A2-162] Length = 308 Score = 228 bits (581), Expect = 8e-58, Method: Composition-based stats. Identities = 97/295 (32%), Positives = 156/295 (52%), Gaps = 8/295 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + IG+R S LA+ + R + H P ++ I+ + T GD+I +RTL ++GGKG Sbjct: 7 QNKVIIGSRESRLAVLQSEMVRDYIKTQH--PELDVEILTMKTTGDKILDRTLDKVGGKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E++K L+ G +VHS KDMP ++ L + A+ RED RDV + S DL Sbjct: 65 LFVKELDKALLEGRTMLSVHSLKDMPMEVPGELPLLAFSKREDPRDVLVLPEGVSELDLT 124 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +G SSLRR L ++ V RG ++TRL KL+N + ++LA AG+KRL E Sbjct: 125 --KPLGCSSLRRTLQLKELYPEMEVKSIRGNLQTRLRKLDNGEYSGLILAAAGLKRLGLE 182 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + ++ P+ GQG + ++ + ++ E W + + ERAF+ L+G Sbjct: 183 NRICRYFSEDEILPAAGQGILAVQ--GRQDLTYDYLEGYRDEKAWFAGSAERAFVKYLNG 240 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLAS-DGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C S +A + +G L+ G+ DG + + S G + +A +GRD A+ + Sbjct: 241 GCSSPVAAYGVVEGDELFLRGLYYRECDG-RYFKDSIRGPKSEAEKLGRDLAKRM 294 >gi|310658305|ref|YP_003936026.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Clostridium sticklandii DSM 519] gi|308825083|emb|CBH21121.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Clostridium sticklandii] Length = 304 Score = 228 bits (581), Expect = 8e-58, Method: Composition-based stats. Identities = 90/295 (30%), Positives = 145/295 (49%), Gaps = 4/295 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +G+R S LAL + L ++ P + I + TKGD+I + L ++ KG+F Sbjct: 2 KIIVGSRGSQLALTQTKLIVNELSKLN--PNVDFEIKVIKTKGDKIQDIPLDKMNDKGIF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL- 123 +EIE++LIS EID AVHS KDMPTK+ + L RED RD I L+DL++ Sbjct: 60 VKEIEEQLISYEIDMAVHSMKDMPTKMDERLVFPVIPKREDSRDALILKNNLKLEDLSML 119 Query: 124 -HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +IGT S RR RG I+TR+NKL+ I+LA +G+KR+ +E Sbjct: 120 ETMIIGTGSKRRSYQFKASYPKAEFEPIRGNIDTRINKLHTQNLDGIILAASGLKRISRE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + + P+P QG + ++T N+ + ++ + + ERA+L E++G Sbjct: 180 NEISHYFDEKTMIPAPCQGILALQTRTNDYQVIAVLSKVEDRCSRIQYIAERAYLEEIEG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C + + + G + Y + G + G +A +GR A+ ++ Sbjct: 240 GCHAPVGAYCEINGDKITIYAVYGDEQGNKLIRDNITGATDNADELGRTLAKKMK 294 >gi|49483913|ref|YP_041137.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MRSA252] gi|257425786|ref|ZP_05602210.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 55/2053] gi|257428452|ref|ZP_05604850.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 65-1322] gi|257431086|ref|ZP_05607463.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 68-397] gi|257433769|ref|ZP_05610127.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus E1410] gi|257436685|ref|ZP_05612729.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus M876] gi|282904242|ref|ZP_06312130.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus C160] gi|282906067|ref|ZP_06313922.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Btn1260] gi|282908982|ref|ZP_06316800.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911298|ref|ZP_06319100.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus WBG10049] gi|282914467|ref|ZP_06322253.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus M899] gi|282919436|ref|ZP_06327171.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus C427] gi|282924813|ref|ZP_06332479.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus C101] gi|283958422|ref|ZP_06375873.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus A017934/97] gi|293503545|ref|ZP_06667392.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 58-424] gi|293510560|ref|ZP_06669265.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus M809] gi|293537102|ref|ZP_06671782.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus M1015] gi|295428242|ref|ZP_06820871.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590795|ref|ZP_06949433.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus MN8] gi|55976402|sp|Q6GG35|HEM3_STAAR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|49242042|emb|CAG40741.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MRSA252] gi|257271480|gb|EEV03626.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 55/2053] gi|257275293|gb|EEV06780.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 65-1322] gi|257278034|gb|EEV08682.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 68-397] gi|257281862|gb|EEV11999.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus E1410] gi|257284036|gb|EEV14159.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus M876] gi|282313179|gb|EFB43575.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus C101] gi|282317246|gb|EFB47620.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus C427] gi|282321648|gb|EFB51973.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus M899] gi|282324993|gb|EFB55303.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus WBG10049] gi|282327246|gb|EFB57541.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331359|gb|EFB60873.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Btn1260] gi|282595860|gb|EFC00824.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus C160] gi|283790571|gb|EFC29388.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus A017934/97] gi|290919947|gb|EFD97015.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus M1015] gi|291095211|gb|EFE25476.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus 58-424] gi|291466451|gb|EFF08972.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus M809] gi|295127642|gb|EFG57279.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575681|gb|EFH94397.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus MN8] gi|298694941|gb|ADI98163.1| Porphobilinogen deaminase [Staphylococcus aureus subsp. aureus ED133] gi|312437871|gb|ADQ76942.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus TCH60] gi|315195573|gb|EFU25960.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus CGS00] Length = 308 Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 167/305 (54%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKG Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L Sbjct: 59 LFVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ Sbjct: 119 EGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+D Sbjct: 179 DDIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMD 238 Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++ Sbjct: 239 GSCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKKVSNKLKEQG 296 Query: 301 NKNVF 305 + Sbjct: 297 AYEII 301 >gi|322435837|ref|YP_004218049.1| porphobilinogen deaminase [Acidobacterium sp. MP5ACTX9] gi|321163564|gb|ADW69269.1| porphobilinogen deaminase [Acidobacterium sp. MP5ACTX9] Length = 318 Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats. Identities = 100/320 (31%), Positives = 162/320 (50%), Gaps = 21/320 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITN---RTLTE 57 M + RIG+R S LAL A + L H + I + T GDR+ Sbjct: 1 MTQ--IRIGSRGSQLALWQANHIAAELRAH----GHQVEIEVIRTTGDRMQQPGFVPPPG 54 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 + GKG+F +EIE L+ G ID AVHS KD+PT + I+A PR D RD F+ + Sbjct: 55 LDGKGIFIKEIEDALLDGRIDLAVHSYKDLPTTIDPRFTIAAVPPRADARDAFVCEPYWA 114 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L L IGT+S RR+A LL R D++ ++ RG I+TRL KL A++LA AG+ Sbjct: 115 LHTLPHAGRIGTTSPRRRAQLLALRPDLTFVELRGNIDTRLRKLEEGACDALVLACAGLD 174 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIET-----------HVNNPKAQELVKVINHEDT 226 R+ + + + + ++++ P+PGQGA+ +ET +P + ++ + H +T Sbjct: 175 RIARTESVHQRFDVDELTPAPGQGALALETRSPAHALDTEDPTRDPAIYKAIRALEHPET 234 Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-A 285 + + ERAFLAE+ G C+ + Y VL+ DG+ + + + + + A Sbjct: 235 RFATDAERAFLAEMGGGCELPLGAHCLSTSGVYRLYAQVLSPDGEYMVQTTLDRHPEEPA 294 Query: 286 INIGRDAAQYIRFISNKNVF 305 +G+ AA+ ++ ++ Sbjct: 295 AALGQRAAEILKAQGALDLL 314 >gi|255657374|ref|ZP_05402783.1| porphobilinogen deaminase [Clostridium difficile QCD-23m63] gi|296448968|ref|ZP_06890759.1| hydroxymethylbilane synthase [Clostridium difficile NAP08] gi|296879793|ref|ZP_06903766.1| hydroxymethylbilane synthase [Clostridium difficile NAP07] gi|296262194|gb|EFH08998.1| hydroxymethylbilane synthase [Clostridium difficile NAP08] gi|296429082|gb|EFH14956.1| hydroxymethylbilane synthase [Clostridium difficile NAP07] Length = 301 Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats. Identities = 106/295 (35%), Positives = 159/295 (53%), Gaps = 3/295 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LAL + L + P + I + TKGD I N +L +IG KGLF Sbjct: 3 IVVGTRGSNLALIQTEWVINELKKKY--PEISFEIKIIKTKGDLIQNVSLDKIGDKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124 +EIE++L+ G+ID AVHS KDMP+ L GL+ + RED RDV I ++L DL Sbjct: 61 KEIEQQLLYGKIDIAVHSMKDMPSYLADGLKFAHTPKREDPRDVLILREGYKNLDDLPRG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +VIGT S RRK LL+ R D++++ RG +ETR+ K+ + H I+LA +GI R + Sbjct: 121 AVIGTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L ++ P+P QGA+ IE N+ K + +V + E+T + ER FL ++GSC Sbjct: 181 ISSYLPVDVVIPAPAQGALAIEIRSNDSKIEGIVNSLKDENTEIQILAERGFLDGVNGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +A + ++ G+ S+GK S +G+ +G A+ + Sbjct: 241 HIPMAAYCEIIQDKIHLTGLYGDSEGKKVVIKSIDGDISSPRELGLKLAKLVLKE 295 >gi|260220724|emb|CBA28572.1| Porphobilinogen deaminase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 312 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 103/296 (34%), Positives = 161/296 (54%), Gaps = 8/296 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 F I TR S LAL A ++ L ++ ++ ++TKGD+I +R+L+++GGKGLF Sbjct: 12 TFTIATRESRLALWQAEHVKALLEQ----SGASVSLLGMTTKGDQILDRSLSKVGGKGLF 67 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G ++ + RED D ++S T S+ DL Sbjct: 68 VKELEVALEDGRADLAVHSLKDVPMELPDGFALACVMEREDPWDAWVSGTYASVMDLPKG 127 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR ALL R D+ + RG ++TRL KL++ I+LA AG+KRL E Sbjct: 128 AVVGTSSLRRVALLRAIRPDLKIEPLRGNLDTRLRKLDDGLYDGIVLAAAGLKRLGLESR 187 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + E P+ GQGA+ IE + ++ + H+ TW +V+ ERA + GSC Sbjct: 188 IRAVFEPEQMLPAAGQGALGIEVRAGRQDVEAALQHLVHQPTWLAVSAERAVSRMMGGSC 247 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG-KIFHEVSRNG---NRCDAINIGRDAAQYI 296 +A +A G L+ ++G + +G + +A +G A+ + Sbjct: 248 SMPLAAYATISGDELHIRAAWGDAEGIQPVVYARASGLAKDAPEATALGEQVARDL 303 >gi|282916930|ref|ZP_06324688.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus D139] gi|283770735|ref|ZP_06343627.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus H19] gi|282319417|gb|EFB49769.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus D139] gi|283460882|gb|EFC07972.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus H19] Length = 308 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 167/305 (54%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKG Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L Sbjct: 59 LFVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ Sbjct: 119 EGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+D Sbjct: 179 DDIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMD 238 Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++ Sbjct: 239 GSCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKKVSNKLKEQG 296 Query: 301 NKNVF 305 + Sbjct: 297 AYEII 301 >gi|302333336|gb|ADL23529.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus JKD6159] Length = 308 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 167/305 (54%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKG Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L Sbjct: 59 LFVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ Sbjct: 119 EGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+D Sbjct: 179 DDIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMD 238 Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ IAG+A + F G+++ DGK E + NG + + +G+ + ++ Sbjct: 239 GSCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTLNGT--NPVELGKKVSNKLKKQG 296 Query: 301 NKNVF 305 + Sbjct: 297 AYEII 301 >gi|161524048|ref|YP_001579060.1| porphobilinogen deaminase [Burkholderia multivorans ATCC 17616] gi|160341477|gb|ABX14563.1| porphobilinogen deaminase [Burkholderia multivorans ATCC 17616] Length = 402 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 165/303 (54%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 87 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 144 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 145 VKELESALADGRADLAVHSLKDVPMMLPDGFALAAIMQREDPRDAFVSNDYASLDALPAG 204 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E Sbjct: 205 AVVGTSSLRREAMLRARYPQLQVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEAR 264 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++ED PP+ GQGA+ IE + ++ ++ T +V ER L GSC Sbjct: 265 IRALLDVEDSPPAAGQGALGIEIAAHRTDVAAWLEPLHDAQTALAVEAERMVSRALGGSC 324 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301 + +A A + LY G V DG + DA+ +GR + + Sbjct: 325 EVPLAAHAVWRAGELYLTGRVSTIDGTRVLTAEECASVVTVADALALGRAVSDELEAQGA 384 Query: 302 KNV 304 + Sbjct: 385 LEI 387 >gi|299533189|ref|ZP_07046573.1| porphobilinogen deaminase [Comamonas testosteroni S44] gi|298718719|gb|EFI59692.1| porphobilinogen deaminase [Comamonas testosteroni S44] Length = 314 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 102/300 (34%), Positives = 159/300 (53%), Gaps = 8/300 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LA+ A ++ L H++ ++ ++TKGD+I +R L+++GGKGLF Sbjct: 11 IVIATRESQLAMWQAEHVQAILRGR----GHSVDLLGMTTKGDQILDRALSKVGGKGLFV 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P +L +G ++ + RED RD F+S+ SL +L + Sbjct: 67 KELEVALEEGRADLAVHSLKDVPMELPEGFVLACVMTREDPRDAFVSNRYASLDELPQGA 126 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ALL R D+ + RG + TRL KL+ + AI+LA AG+ RL+ + I Sbjct: 127 VVGTSSLRRQALLQALRPDLKIEALRGNVNTRLRKLDEGQYDAIVLAAAGLMRLEMSERI 186 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + P+ GQGA+ IE + + + + H TW +V ERA + GSC Sbjct: 187 RAKFDPAQMLPAAGQGALGIEVRADRQDIIDALAPLAHMPTWLTVTAERAVSRCMGGSCS 246 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNRCD---AINIGRDAAQYIRFISN 301 +A + +G TL+ +G V + + D A +G A ++ Sbjct: 247 MPLAAYGRFEGDTLHMDAAWGDMEGSKGLVRVQASASVTDFASANALGEQLATQLQAAGA 306 >gi|284039864|ref|YP_003389794.1| porphobilinogen deaminase [Spirosoma linguale DSM 74] gi|283819157|gb|ADB40995.1| porphobilinogen deaminase [Spirosoma linguale DSM 74] Length = 309 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 162/304 (53%), Gaps = 8/304 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+ A ++ L ++ + TKGD + +R+L +IG KG+FT Sbjct: 3 IRIGTRSSRLAVWQAEHIQALLEK----GGLTSELVLIETKGDLVLDRSLAKIGSKGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E +L SG ID AVHSAKD+P+ L L I A+ RE DV +S Sbjct: 59 QELEDQLRSGTIDIAVHSAKDLPSNLPADLHIIAFTEREPANDVLVSRNKSLSLQGGESF 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A+L + ++ +D RG ++TR+ KL+ A+LLAYAG+ R+ + +I Sbjct: 119 RIGTSSTRRVAMLKHYCPQLATVDMRGNLQTRIRKLDEGHCDALLLAYAGVHRMGYDDLI 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVN---NPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 E L +++F P+ GQG+I IE + + A+ + ++INHE T + ERAFLA L+G Sbjct: 179 VERLPLDEFTPAVGQGSIAIEVATDALKSDIAEAITRLINHEPTAACLRAERAFLARLEG 238 Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C A T+ G +++ DG + +G+ ++ +G A+ I Sbjct: 239 GCSIPSFALAQWTDDTTVSLTGGLVSLDGSQLLRETFSGSAQESHLLGHSLAEAILARGG 298 Query: 302 KNVF 305 + Sbjct: 299 DTLL 302 >gi|126701044|ref|YP_001089941.1| porphobilinogen deaminase [Clostridium difficile 630] gi|122973521|sp|Q180R9|HEM3_CLOD6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|115252481|emb|CAJ70324.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Clostridium difficile] Length = 301 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 105/295 (35%), Positives = 158/295 (53%), Gaps = 3/295 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LAL + L + P + I + TKGD I N +L +IG KGLF Sbjct: 3 IVVGTRGSNLALIQTEWVINELKKKY--PEISFEIKIIKTKGDLIQNVSLDKIGDKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124 +EIE++L+ G+ID AVHS KDMP+ L GL+ + RED RDV I ++L DL Sbjct: 61 KEIEQQLLDGKIDIAVHSMKDMPSYLANGLKFAHTPKREDPRDVLILREGYKNLDDLPHG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +VIGT S RRK LL+ R D++++ RG +ETR+ K+ + H I+LA +GI R + Sbjct: 121 AVIGTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L ++ P+P QGA+ IE N+ + +V + E+T + ER FL ++GSC Sbjct: 181 ISSYLPVDVVIPAPAQGALAIEIRSNDSAIEGIVNSLKDENTEIQILAERGFLDGVNGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +A + ++ G+ S+GK S +G+ +G A+ + Sbjct: 241 HIPMAAYCEIIQDKIHLTGLYGDSEGKKVVIKSIDGDISSPRELGLKLAKLVLKE 295 >gi|325841152|ref|ZP_08167277.1| hydroxymethylbilane synthase [Turicibacter sp. HGF1] gi|325490009|gb|EGC92355.1| hydroxymethylbilane synthase [Turicibacter sp. HGF1] Length = 301 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 105/295 (35%), Positives = 157/295 (53%), Gaps = 3/295 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LAL L H P + + TKGD I + +L +IG KGLF Sbjct: 3 VVVGTRGSKLALTQTQWVIDQLRKYH--PEVEFEVKIIKTKGDLIQHVSLDKIGDKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124 EIE++L+ EID AVHS KDMP+KL KGL+ +A RED RDV I ++L+DL Sbjct: 61 REIEQQLLDKEIDIAVHSMKDMPSKLPKGLKFAAVPKREDPRDVLILKDGYKTLEDLPKG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGT S RRK LL++R D+ ++ RG I+TR+ K+ + I+LA AGI R ++ Sbjct: 121 AKIGTGSKRRKYQLLKYRPDLDILSIRGNIDTRIRKIEDENLDGIVLAAAGILRAGMSEM 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + ++ P+P QGA+ I+ + + + L++ I +T V ERAFLA ++G C Sbjct: 181 ISSYIPVDIMVPAPAQGALAIQIREADLEIEALIESIKDVETEIRVAAERAFLAGVNGGC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + + +G L G+ + +G G I +G + AQ++ Sbjct: 241 HIPMGAYCELEGEKLKLTGLYGSENGNCLVRKCLEGGIESPIELGLEVAQFVLKE 295 >gi|86141058|ref|ZP_01059617.1| porphobilinogen deaminase [Leeuwenhoekiella blandensis MED217] gi|85833000|gb|EAQ51449.1| porphobilinogen deaminase [Leeuwenhoekiella blandensis MED217] Length = 305 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 92/303 (30%), Positives = 151/303 (49%), Gaps = 6/303 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LAL A + L ++ + +I + + GD I ++ L E+G G+ Sbjct: 3 KTIRIGTRDSELALWQAHTVQDQLENL----GYKTELISVKSTGDLILDKPLYELGITGI 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ ++ +I+G++D AVHS KD+PT+L G+ A LPR D+F+ ++ D Sbjct: 59 FTKTLDVAMINGDVDIAVHSMKDVPTQLPNGIVQGAVLPRAATEDIFVFKKDKNATDFTK 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 I T SLRRKA L V+D RG + TRL K+ +N + A AG++R+ + Sbjct: 119 SVTIATGSLRRKAQWLNKYPKHQVVDLRGNVNTRLQKVADNDWAGAVFAKAGLERINLKP 178 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 E+ ++ P+P QGA+ I N+ +E +N D + ER FL +L+G Sbjct: 179 ENHEV--LDWMIPAPAQGAMVIAVMDNDAFCKEACAKLNDADAALTTKVEREFLRKLEGG 236 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C + I A + ++F+G + + DG E+ + + ++ G A I + Sbjct: 237 CTAPIGAIAKIEDDHIHFHGALFSLDGTQKLEIKESIPVSECLDFGALCALKILEEGGRE 296 Query: 304 VFN 306 + Sbjct: 297 LME 299 >gi|197106866|ref|YP_002132243.1| porphobilinogen deaminase [Phenylobacterium zucineum HLK1] gi|238058996|sp|B4RC21|HEM3_PHEZH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|196480286|gb|ACG79814.1| porphobilinogen deaminase [Phenylobacterium zucineum HLK1] Length = 320 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 116/319 (36%), Positives = 173/319 (54%), Gaps = 16/319 (5%) Query: 1 MEKKPF-RIGTRCSPLALAHAFETRSSLMDVHKIPPH---NIV----IIPLSTKGDRITN 52 M +P RIG R S L+L + + + + P + +IP++T GDR+ + Sbjct: 1 MPTQPVVRIGARGSKLSLTQSGIVQRRIAAALGVDPDNAAEVERVAPLIPITTTGDRVQD 60 Query: 53 RTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS 112 R L EIGGKGLFT+EIE+ L+ G IDCAVHS KDMP +L +GL I+A RED RD FIS Sbjct: 61 RRLLEIGGKGLFTKEIEEALMDGRIDCAVHSMKDMPAELPEGLCIAAIPEREDPRDAFIS 120 Query: 113 HTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLA 172 + L+DL +++GT+SLRR+A L R D+ RG +ETRL KL + AILLA Sbjct: 121 RGPERLEDLTEGAILGTASLRRQAQCLHRRPDLEAKLLRGNVETRLGKLEAGEYDAILLA 180 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 Y+G++RL + K +++ ++ PP+PGQGA+ +ET + + + T +V Sbjct: 181 YSGLRRLGLGHLPKSLIDPKEAPPAPGQGALAVETR-AADRDLPWAQALRCRPTTLAVAA 239 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-------A 285 ER L L+GSC++ I A+ +G T L+ DGK+ S A Sbjct: 240 ERGALIALEGSCRTPIGAHAWLEGGTCKLIVEALSPDGKLRFRHSGEAELSQMADPEASA 299 Query: 286 INIGRDAAQYIRFISNKNV 304 ++G ++ + + Sbjct: 300 RDLGLSLGLAVKEEAGDAI 318 >gi|21283343|ref|NP_646431.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MW2] gi|49486497|ref|YP_043718.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MSSA476] gi|297207616|ref|ZP_06924051.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911698|ref|ZP_07129142.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus TCH70] gi|23821677|sp|Q8NW74|HEM3_STAAW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|55976400|sp|Q6G8Q5|HEM3_STAAS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|21204783|dbj|BAB95479.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MW2] gi|49244940|emb|CAG43401.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MSSA476] gi|296887633|gb|EFH26531.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300887119|gb|EFK82320.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus TCH70] gi|323440785|gb|EGA98494.1| porphobilinogen deaminase [Staphylococcus aureus O11] gi|323442940|gb|EGB00563.1| porphobilinogen deaminase [Staphylococcus aureus O46] Length = 308 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 167/305 (54%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L V P I I + TKGDRI ++ L+++GGKG Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L Sbjct: 59 LFVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ Sbjct: 119 EGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+D Sbjct: 179 DDIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMD 238 Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++ Sbjct: 239 GSCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKTVSNKLKEQG 296 Query: 301 NKNVF 305 + Sbjct: 297 AYEII 301 >gi|167746868|ref|ZP_02418995.1| hypothetical protein ANACAC_01580 [Anaerostipes caccae DSM 14662] gi|167653828|gb|EDR97957.1| hypothetical protein ANACAC_01580 [Anaerostipes caccae DSM 14662] Length = 292 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 102/296 (34%), Positives = 156/296 (52%), Gaps = 6/296 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 ME K RIG+R S LA+A L + P + ++ L T GD+I N+TL +IGG Sbjct: 1 MEPKRLRIGSRESLLAVAQTRLVIEQLKANY--PELSFELVTLKTTGDKILNKTLDKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+++ L+ G ID AVHS KD+P ++ L ++A R D RDV + ++ ++ Sbjct: 59 KGLFVKELDQALLDGRIDMAVHSMKDLPMEISDDLPVAAVPKRGDPRDVLVLPSSGDFEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 VIG+SS RR + R + RG I TRL KL+ + ++++A AG+KR Sbjct: 119 --FGQVIGSSSARRVLQVRRLFPEAEFQSIRGNIHTRLRKLDKGQYSSLIMAAAGLKRAG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ I ++E+ P+ GQG +C++ Q L I+ +T ER+F+ L Sbjct: 177 LKERISRYFSVEEMLPAAGQGTLCVQV--RKDFDQSLFSCIHDRETELVTEAERSFVRAL 234 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 DG C S IA +A GS L G+ + ++S G DA +GR A+ I Sbjct: 235 DGGCSSPIAAYAEITGSDLCLTGLYYNAADNTGRKMSITGKAQDAGGLGRRLAEQI 290 >gi|215434281|gb|ACJ66828.1| porphobilinogen deaminase [uncultured bacterium pSY1435] Length = 310 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 105/300 (35%), Positives = 153/300 (51%), Gaps = 1/300 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LAL A R L+ + ++ ++T+GDRI +R L E+GGKGLF Sbjct: 7 LRLGTRASALALWQARHVRDRLLARWGA-AIEVELVEITTEGDRIIDRPLNEVGGKGLFV 65 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 IE +L+ ID AVHS KD+P GL I R D RDV + +L L + Sbjct: 66 TGIEDRLLDRSIDFAVHSMKDLPGHTPDGLAIVCTPERADARDVLVGRAGSTLVRLPAGT 125 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR AL R I VI RG + TR+ K+ + +LLA AG++RL+ + + Sbjct: 126 RVGTSSLRRAALARRINPGIEVIAIRGNVPTRIAKIADGVCDVVLLAAAGLERLELAQHV 185 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ E F P+ QG + IE ++ + EL+ + H DT ER FLA L+G C+ Sbjct: 186 AEYLDPESFCPAACQGILAIEARADDRRVHELLAPLEHADTATLAAAERGFLARLEGGCQ 245 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A A L+ G+V+ G+ + G A +GR A+ + + + Sbjct: 246 VPMACHARLDAGVLHVRGLVVGIGGEPLFDAREQGEPSAAAQLGRTVAEQLLVLGAAEIL 305 >gi|295095182|emb|CBK84272.1| hydroxymethylbilane synthase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 273 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 100/263 (38%), Positives = 142/263 (53%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 + T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +GL + Sbjct: 1 MVTRGDVILDTPLAKVGGKGLFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICE 60 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 RED RD F+S+ SL L SV+GTSSLRR+ L R D+ + RG + TRL KL+ Sbjct: 61 REDPRDAFVSNRYDSLDALPAGSVVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLGKLD 120 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 N AI+LA AG+KRL E+ I+ L E P+ GQGA+ IE + + + Q L+ +N Sbjct: 121 NGDYDAIILAVAGLKRLGLEERIRVALPPELSLPAVGQGAVGIECRLVDARTQALLAPLN 180 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 H+DT V ERA L+G C+ I +A L+ +V A DG R G Sbjct: 181 HDDTAVRVKAERAMNTRLEGGCQVPIGSYAELTDGELWLRALVGAPDGSQMVRGERRGKP 240 Query: 283 CDAINIGRDAAQYIRFISNKNVF 305 DA +G A+ + + + Sbjct: 241 QDAEALGVSLAEELLNNGAREIL 263 >gi|255102624|ref|ZP_05331601.1| porphobilinogen deaminase [Clostridium difficile QCD-63q42] gi|255308450|ref|ZP_05352621.1| porphobilinogen deaminase [Clostridium difficile ATCC 43255] Length = 301 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 105/295 (35%), Positives = 158/295 (53%), Gaps = 3/295 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LAL + L + P + I + TKGD I N +L +IG KGLF Sbjct: 3 IVVGTRGSNLALIQTEWVINELKKKY--PEISFEIKIIKTKGDLIQNVSLDKIGDKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124 +EIE++L+ G+ID AVHS KDMP+ L GL+ + RED RDV I ++L DL Sbjct: 61 KEIEQQLLDGKIDIAVHSMKDMPSYLADGLKFAHTPKREDPRDVLILREGYKNLDDLPHG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +VIGT S RRK LL+ R D++++ RG +ETR+ K+ + H I+LA +GI R + Sbjct: 121 AVIGTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L ++ P+P QGA+ IE N+ + +V + E+T + ER FL ++GSC Sbjct: 181 ISSYLPVDVVIPAPAQGALAIEIRSNDSTIEGIVNSLKDENTEIQILAERGFLDGVNGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +A + ++ G+ S+GK S +G+ +G A+ + Sbjct: 241 HIPMAAYCEIIQDKIHLTGLYGDSEGKKVVIKSIDGDISSPRELGLKLAKLVLKE 295 >gi|254977043|ref|ZP_05273515.1| porphobilinogen deaminase [Clostridium difficile QCD-66c26] gi|255094370|ref|ZP_05323848.1| porphobilinogen deaminase [Clostridium difficile CIP 107932] gi|255316123|ref|ZP_05357706.1| porphobilinogen deaminase [Clostridium difficile QCD-76w55] gi|255518784|ref|ZP_05386460.1| porphobilinogen deaminase [Clostridium difficile QCD-97b34] gi|255651962|ref|ZP_05398864.1| porphobilinogen deaminase [Clostridium difficile QCD-37x79] gi|260684926|ref|YP_003216211.1| porphobilinogen deaminase [Clostridium difficile CD196] gi|260688584|ref|YP_003219718.1| porphobilinogen deaminase [Clostridium difficile R20291] gi|306521710|ref|ZP_07408057.1| porphobilinogen deaminase [Clostridium difficile QCD-32g58] gi|260211089|emb|CBA66474.1| porphobilinogen deaminase [Clostridium difficile CD196] gi|260214601|emb|CBE07178.1| porphobilinogen deaminase [Clostridium difficile R20291] Length = 301 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 105/295 (35%), Positives = 158/295 (53%), Gaps = 3/295 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LAL + L + P + I + TKGD I N +L +IG KGLF Sbjct: 3 IVVGTRGSTLALIQTEWVINELKKKY--PEISFEIKIIKTKGDLIQNVSLDKIGDKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124 +EIE++L+ G+ID AVHS KDMP+ L GL+ + RED RDV I ++L DL Sbjct: 61 KEIEQQLLDGKIDIAVHSMKDMPSYLADGLKFAHTPKREDPRDVLILREGYKNLDDLPHG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +VIGT S RRK LL+ R D++++ RG +ETR+ K+ + H I+LA +GI R + Sbjct: 121 AVIGTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I L ++ P+P QGA+ IE N+ + +V + E+T + ER FL ++GSC Sbjct: 181 ISSYLPVDVVIPAPAQGALAIEIRSNDSTIEGIVNSLKDENTEIQILAERGFLDGVNGSC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +A + ++ G+ S+GK S +G+ +G A+ + Sbjct: 241 HIPMAAYCEIIQDKIHLTGLYGDSEGKKVVIKSIDGDISSPRELGLKLAKLVLKE 295 >gi|161527999|ref|YP_001581825.1| porphobilinogen deaminase [Nitrosopumilus maritimus SCM1] gi|238054422|sp|A9A1A1|HEM3_NITMS RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|160339300|gb|ABX12387.1| porphobilinogen deaminase [Nitrosopumilus maritimus SCM1] Length = 311 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 107/304 (35%), Positives = 162/304 (53%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 + +G R S L++A + L H P I ++TKGD +R L I KG+F Sbjct: 2 KYIVGARGSQLSVAQTNLVIAELKKAH--PDTEYEIKTITTKGDTD-SRPLFTIDQKGIF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EI++ + E+D AVHS KD+P++L L ++ RE + DVFIS +L + Sbjct: 59 EKEIDRAVAQKEVDFAVHSLKDVPSELDDNLVLACIPKRETVNDVFISPDGSTLDSIKPG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SVIGTSSLRR + R R D++V RG IETR+ K + AI+LA AGI RL + Sbjct: 119 SVIGTSSLRRAVQVSRKRPDVTVKPIRGNIETRIKKASGENYDAIVLAKAGISRLGVDVK 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E L+ +DF PSPGQGAI I ++ K E++K I D+ + ERA +D C Sbjct: 179 YTE-LSTDDFSPSPGQGAIAIVARADDSKTIEMLKKIEDPDSRLEIEAERALSDFVDSGC 237 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + + +A GS + + DGK F VS+ G++ + ++G+ A + +R ++ Sbjct: 238 RFPVGAYAKSNGSEMTLTVTAFSVDGKQFLHVSKTGDKNNPKSLGQSAGEELREKGVNDL 297 Query: 305 -FNF 307 N+ Sbjct: 298 ALNW 301 >gi|309790863|ref|ZP_07685407.1| porphobilinogen deaminase [Oscillochloris trichoides DG6] gi|308227150|gb|EFO80834.1| porphobilinogen deaminase [Oscillochloris trichoides DG6] Length = 353 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 98/333 (29%), Positives = 153/333 (45%), Gaps = 30/333 (9%) Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M +GTR S LA+ + ++ H + + +STKGDRI + L+ +G Sbjct: 15 MSNATKLILGTRGSKLAVTQSGMMADAMRAAHA--GLEVEMQLISTKGDRILDVALSAVG 72 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT----- 114 KGLF +E+E+ L+ ++D VHS KD+P+ + GL ++A+ PR D RD + Sbjct: 73 DKGLFVKELEQALLDNQVDFCVHSCKDLPSVVPDGLTLAAFPPRADARDALVVMESAVGD 132 Query: 115 -------AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH 167 Q L +V+GTSSLRR + R D+ + D RG ++TRL KL + + Sbjct: 133 LDLSNFSMQDSPLLRQGAVVGTSSLRRACQIRAIRPDLDLRDVRGNVDTRLRKLADGQFE 192 Query: 168 AILLAYAGIKRLKKEKVIKE---------------ILNIEDFPPSPGQGAICIETHVNNP 212 AI+LA AG+ RL + + P+ QG + IE + Sbjct: 193 AIILASAGLDRLGFTDATIDGPRHFEAVDARFVALPIPTTQMLPAVSQGILAIECRAADA 252 Query: 213 KAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272 L+ ++H + + ERAFLA L+G C+ IA FA +G L G+V + DG Sbjct: 253 DTISLLGALDHAPSRAAALAERAFLARLEGGCQVPIAAFAVVEGENLRLRGMVGSLDGTT 312 Query: 273 FHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 G+ D IG A+ + ++ Sbjct: 313 QVRGELVGSLADPAAIGLALAEDLISQGASDIL 345 >gi|226354974|ref|YP_002784714.1| porphobilinogen deaminase [Deinococcus deserti VCD115] gi|259647793|sp|C1CYD9|HEM3_DEIDV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226316964|gb|ACO44960.1| putative Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Deinococcus deserti VCD115] Length = 311 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 108/309 (34%), Positives = 158/309 (51%), Gaps = 7/309 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR--TLTEIGG 60 + +GTR S LALA + L + + P + I +STKGDR + + G Sbjct: 1 MRTVTVGTRGSTLALAQTRWVVARLKE--EWPDTDFRIQTISTKGDRNRESLEAMAQKGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLK 119 KG + +EIE L+ ID AVHS KD+PT+ +GL++++ R D RDV I + L Sbjct: 59 KGFWVKEIEDALLQKRIDIAVHSLKDLPTEQPEGLEVASIPKRVDARDVLIGKEGMKRLA 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL + +GTSS+RRKA L +R D+ VID RG I+TRL L ++ AI+LA AG+ R Sbjct: 119 DLPQGARVGTSSVRRKAFLRAYRPDLQVIDLRGNIDTRLAALAGDEYDAIILAAAGLIRT 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETH--VNNPKAQELVKVINHEDTWDSVNCERAFL 237 + I E + + P+PGQGA+ +ET N E+ I+ T D + ER FL Sbjct: 179 EMRHRIDEFVEPDILLPAPGQGALALETRSGPENDLTIEVAYAIHDHGTDDRITAEREFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 A L C + + A KG L G V A DG + G+ + +IG + A + Sbjct: 239 AGLGAGCMAPVGAHASIKGGVLTLEGWVGALDGSKVIRATSIGDPAECADIGAELAGDML 298 Query: 298 FISNKNVFN 306 + + + Sbjct: 299 GQGAQALID 307 >gi|298207313|ref|YP_003715492.1| porphobilinogen deaminase [Croceibacter atlanticus HTCC2559] gi|83849949|gb|EAP87817.1| porphobilinogen deaminase [Croceibacter atlanticus HTCC2559] Length = 305 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 95/304 (31%), Positives = 153/304 (50%), Gaps = 10/304 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A ++ L ++ + V++P+ + GD I ++ L E+G Sbjct: 1 MS-KVIRIGTRDSELALWQANTVKAQLENL----GYKTVLVPVKSTGDLILDQPLYELGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ +++G++D AVHS KD+PT L KG+ A L R +D+ + L Sbjct: 56 TGIFTKTLDVAMVNGDVDIAVHSMKDVPTALPKGIMQGAVLKRAATKDILVHKGLDFL-- 113 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 I T SLRRKA L + V+D RG + TRL KL +N + + A AG+ R+ Sbjct: 114 -EAEGTIATGSLRRKAQWLNKYPNHKVVDLRGNVNTRLQKLEDNSWNGAIFAKAGLTRIN 172 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + ++ P+P QGA+ I + +E V +N + ER FL L Sbjct: 173 VLPE--HFIELDWMLPAPAQGAMVIAVMEQDVFCKEAVSKLNDHFSEICTTIEREFLKTL 230 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C + I A + ++F G + + DGK E+ + + + N+GR+ A I Sbjct: 231 EGGCTAPIGALAVIEDKDIWFRGCLFSLDGKQKLEIEKRVSLKENRNLGRNCAIEILDQG 290 Query: 301 NKNV 304 K++ Sbjct: 291 GKDL 294 >gi|322379565|ref|ZP_08053902.1| porphobilinogen deaminase [Helicobacter suis HS1] gi|322380567|ref|ZP_08054732.1| porphobilinogen deaminase [Helicobacter suis HS5] gi|321147006|gb|EFX41741.1| porphobilinogen deaminase [Helicobacter suis HS5] gi|321147959|gb|EFX42522.1| porphobilinogen deaminase [Helicobacter suis HS1] Length = 302 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 99/303 (32%), Positives = 154/303 (50%), Gaps = 5/303 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KP IG+R S LAL A ++ L + + + + TKGD+I + L +IGGKG Sbjct: 1 MKPLIIGSRGSALALWQARYIQTQLESLGLLSVIEV----VKTKGDKILDVPLAKIGGKG 56 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E+ L+S +ID AVHS KD+P + ++ L ++ R D RD F+S + + KDL Sbjct: 57 LFTKELEELLLSKDIDLAVHSLKDVPVEFVEPLDLACVSVRADARDCFLSFKSPNFKDLP 116 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GT+SLRR L R R D+ + RG ++TRL +L + AI+LA AG++RL+ + Sbjct: 117 KGAKVGTTSLRRSMQLKRKRPDLDTLSLRGNVQTRLKRLEAGEFDAIVLACAGVERLQIK 176 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + IE+ P GQGA+ +E ++P + +N + ER F+ +L G Sbjct: 177 VPYQIPFEIEEMIPCMGQGALGVEMCTSHP-LFNTIAGLNDSTSAFLCGVERLFVKKLGG 235 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I A KG L +V DG + G A + + K Sbjct: 236 GCQVPIGVHASLKGDHLEICAVVGLVDGSQMIKEKIQGLAKQANTLVQTLLDRFLAQGAK 295 Query: 303 NVF 305 + Sbjct: 296 EIL 298 >gi|238022038|ref|ZP_04602464.1| hypothetical protein GCWU000324_01943 [Kingella oralis ATCC 51147] gi|237866652|gb|EEP67694.1| hypothetical protein GCWU000324_01943 [Kingella oralis ATCC 51147] Length = 316 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 100/303 (33%), Positives = 160/303 (52%), Gaps = 3/303 (0%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + I +R S LA+ A ++ L ++ P I II ++T+GD+I ++TL++IGGKGL Sbjct: 8 QTLTIASRESALAMWQARHIQAQLQSLY--PQCQIHIIGMTTQGDQILDKTLSKIGGKGL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L D AVHS KD+P L +G ++A R + D F+S+ L++L Sbjct: 66 FIKELETALQENRADLAVHSIKDVPMDLPQGFTLAAIGERANPFDAFVSNRYTRLEELPH 125 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR+A L +++ RG ++TRL KL+N AI+LA AG++RL+ + Sbjct: 126 GAIVGTSSLRREAQLRARFPHLTIRPLRGNVQTRLAKLDNGDYDAIILAAAGLERLELHE 185 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ +L D P+ GQGA+ IE + +++ +NH T V ERA L GS Sbjct: 186 RIRAVLPPADSLPAAGQGALGIEIAAHRTDLIDVLLPLNHAKTAACVTAERALARALGGS 245 Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ +A + L G+V DG + A +GR A+ + + Sbjct: 246 CQVPLAAYCTADDHGLLTLSGLVGHPDGSVILTAQAQAPAAYADALGRAVAKKLADDGAQ 305 Query: 303 NVF 305 + Sbjct: 306 ELI 308 >gi|189351191|ref|YP_001946819.1| porphobilinogen deaminase [Burkholderia multivorans ATCC 17616] gi|189335213|dbj|BAG44283.1| hydroxymethylbilane synthase [Burkholderia multivorans ATCC 17616] Length = 333 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 165/303 (54%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 76 VKELESALADGRADLAVHSLKDVPMMLPDGFALAAIMQREDPRDAFVSNDYASLDALPAG 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E Sbjct: 136 AVVGTSSLRREAMLRARYPQLQVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEAR 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++ED PP+ GQGA+ IE + ++ ++ T +V ER L GSC Sbjct: 196 IRALLDVEDSPPAAGQGALGIEIAAHRTDVAAWLEPLHDAQTALAVEAERMVSRALGGSC 255 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301 + +A A + LY G V DG + DA+ +GR + + Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTIDGTRVLTAEECASVVTVADALALGRAVSDELEAQGA 315 Query: 302 KNV 304 + Sbjct: 316 LEI 318 >gi|317498182|ref|ZP_07956483.1| porphobilinogen deaminase [Lachnospiraceae bacterium 5_1_63FAA] gi|316894537|gb|EFV16718.1| porphobilinogen deaminase [Lachnospiraceae bacterium 5_1_63FAA] Length = 312 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 112/304 (36%), Positives = 161/304 (52%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 + IG+R S LAL + L + P H I + TKGD+I N+ L +IGGKGLF Sbjct: 2 KYIIGSRGSRLALIQTKYVQEKLAKAY--PEHTFEIQIIKTKGDKIQNKPLDKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE+K+ISGEI VHS KDMP+ KGL + RED RDV I TA+ L +L Sbjct: 60 VKEIEEKIISGEIHMGVHSMKDMPSTPAKGLVFTKVWKREDPRDVLILRTAKHLSELREG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +VI T S RR LL+ R D+ +I+ RG ++TRL K+ + I+LA AG+KRL E V Sbjct: 120 AVIATGSKRRAFQLLKLRPDLQIINIRGNVDTRLRKMEEQQLDGIVLAAAGLKRLGMEDV 179 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + L ED +P QGA+ +E + + Q+++ V E+T + V ER FL ++ GSC Sbjct: 180 ITQYLAPEDMISAPAQGALALEVREDQKELQKMLDVFCDEETMNEVCAERNFLEQMGGSC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN- 303 + Y + DG G + + A + I+ + +N Sbjct: 240 HTPAGARCQKTDQGYELYAMFGNEDGSKQAYTKVYGTC--PEILAQTAVKNIKKTAGRNR 297 Query: 304 VFNF 307 +FN+ Sbjct: 298 IFNW 301 >gi|254251705|ref|ZP_04945023.1| Porphobilinogen deaminase [Burkholderia dolosa AUO158] gi|124894314|gb|EAY68194.1| Porphobilinogen deaminase [Burkholderia dolosa AUO158] Length = 333 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 107/303 (35%), Positives = 165/303 (54%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 76 VKELENALADGRADLAVHSLKDVPMALPDGFSLAAIMTREDPRDAFVSNDYASLDALPAG 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L ++V+ RG ++TRL KL+ AI+LA AG+KRL E Sbjct: 136 AVVGTSSLRREAMLRARYPHLNVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEAR 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L ++D PP+ GQGA+ IE + + ++ T +V ER L GSC Sbjct: 196 IRALLAVDDSPPAAGQGALGIEIASHRTDVAAWLAPLHDPQTALAVEAERMVSRALGGSC 255 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + +A A + LY G V +DG + DA+ +GR + + Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTTDGTRVLTADACAAVISVADALALGRAVSDELEAQGA 315 Query: 302 KNV 304 ++ Sbjct: 316 LDI 318 >gi|322712674|gb|EFZ04247.1| porphobilinogen deaminase [Metarhizium anisopliae ARSEF 23] Length = 327 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 104/319 (32%), Positives = 157/319 (49%), Gaps = 15/319 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +GTR SPLA+A A +SL + P + I ++T GDR N L GG Sbjct: 1 MAPSTITVGTRKSPLAMAQAELVVASLQSI--FPSSSFPIHGMTTTGDRDQNTALYNFGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT------ 114 KGL+T ++E+KL++ E+D VHS KDMPT L + A RED RDV + Sbjct: 59 KGLWTTQLEEKLVARELDIVVHSLKDMPTTLPSDCTLGAVTKREDPRDVLVLKKALRDAN 118 Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLA 172 ++L DL SVIGTSS+RR A L R + D RG I+TRL KL+ + AI+LA Sbjct: 119 GYKTLADLPDGSVIGTSSIRRIAQLARRYPALRFKDVRGNIQTRLKKLDEDPELSAIVLA 178 Query: 173 YAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 AG+ R+ + I + L++++ + GQGA+ +E + +K I H+DT + Sbjct: 179 AAGLLRMDLGEHISQYLDVDNGGILHAVGQGALGVECRAGDEHVLRALKEIEHKDTLLAC 238 Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV---SRNGNRCDAIN 287 ER+ + EL+G C I L V++ GK + + +A Sbjct: 239 LAERSLMRELEGGCSVPIGVETRWVDGKLRLRATVVSVTGKEGVDADVLETVTSEEEAEE 298 Query: 288 IGRDAAQYIRFISNKNVFN 306 +G+ A+ + + + Sbjct: 299 LGKRVARDLVSRGADKILD 317 >gi|294010302|ref|YP_003543762.1| hydroxymethylbilane synthase [Sphingobium japonicum UT26S] gi|292673632|dbj|BAI95150.1| hydroxymethylbilane synthase [Sphingobium japonicum UT26S] Length = 308 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 117/306 (38%), Positives = 170/306 (55%), Gaps = 6/306 (1%) Query: 1 MEK--KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M+K +P R+GTR SPLALA A T ++L H + I+ + T GDRI +R L +I Sbjct: 1 MQKPSRPLRLGTRGSPLALAQAHMTVAALRARHGWDEGAVEIVVVQTSGDRIQDRALADI 60 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGK L+T+E+++ L SGEID AVHS KD+ T ++I+A LPR D+RD + A Sbjct: 61 GGKALWTKELDRALASGEIDFAVHSMKDVETIRPAEIRIAAMLPRADVRDRLV--GADDF 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L V+GTSS RR A + R R D V+ FRG + TRL +L+ +AHA LLA AG+ R Sbjct: 119 AALPERPVVGTSSPRRAAQVRRLRPDAQVVLFRGNVATRLARLDRGEAHATLLAAAGLDR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + V + ++ P+P QGA+ IET + +L+ I+ DT+D V ERA LA Sbjct: 179 LGQGDVGV-AIPVDVMLPAPSQGAVGIETLSGDEAMLDLLAAISDADTFDCVMAERAVLA 237 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L G+C S IA FA + + +++ DG+ + R DA + + Sbjct: 238 GLGGTCHSPIAAFARLEDGQVRLRAEIISPDGRETVGETARIERGDAAA-AEAMGRGLLD 296 Query: 299 ISNKNV 304 ++ + Sbjct: 297 RASPAL 302 >gi|242060650|ref|XP_002451614.1| hypothetical protein SORBIDRAFT_04g004640 [Sorghum bicolor] gi|241931445|gb|EES04590.1| hypothetical protein SORBIDRAFT_04g004640 [Sorghum bicolor] Length = 340 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 122/299 (40%), Positives = 176/299 (58%), Gaps = 5/299 (1%) Query: 13 SPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEK 70 S LALA A ETR L H + II + T GD I ++ L +IGGKGLFT+EI+ Sbjct: 41 SDLALAQARETRDKLKAAHSELAEEGAVEIIIIKTTGDMILDKPLADIGGKGLFTKEIDD 100 Query: 71 KLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTS 130 ++ G ID AVHS KD+PT L +G + LPRED RD FI TA SL +L V+G++ Sbjct: 101 AILQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDARDAFICLTANSLAELPSGCVVGSA 160 Query: 131 SLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILN 190 SLRR++ +L + V++ RG ++TRL KL N HA LLA AG+KRL + + IL+ Sbjct: 161 SLRRQSQILCRYPSLKVVNLRGNVQTRLTKLKNGDVHATLLALAGLKRLNMVENVTSILS 220 Query: 191 IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250 +E+ P+ QGAI I N+ K E + +NHEDT +V CER FL LDG+C++ IA Sbjct: 221 MEEMLPAVAQGAIGIACRSNDNKMMEYLSSLNHEDTRSAVACEREFLTVLDGNCRTPIAA 280 Query: 251 FAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFISNKNVFN 306 +A+ + F G++ + DG +E +R G D + +G+DA ++ + ++ Sbjct: 281 YAHRDKDGSCSFRGLLASPDGSKVYETTRIGPYSFDDMVEMGKDAGHELKAKAGPGFYD 339 >gi|221199353|ref|ZP_03572397.1| porphobilinogen deaminase [Burkholderia multivorans CGD2M] gi|221205745|ref|ZP_03578760.1| porphobilinogen deaminase [Burkholderia multivorans CGD2] gi|221174583|gb|EEE07015.1| porphobilinogen deaminase [Burkholderia multivorans CGD2] gi|221180638|gb|EEE13041.1| porphobilinogen deaminase [Burkholderia multivorans CGD2M] Length = 333 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 165/303 (54%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 76 VKELESALADGRADLAVHSLKDVPMMLPDGFALAAIMQREDPRDAFVSNDYASLDALPAG 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E Sbjct: 136 AVVGTSSLRREAMLRARYPHLQVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEAR 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++ED PP+ GQGA+ IE + ++ ++ T +V ER L GSC Sbjct: 196 IRALLDVEDSPPAAGQGALGIEIAAHRADVAAWLEPLHDAQTALAVEAERMVSRALGGSC 255 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301 + +A A + LY G V DG + DA+ +GR + + Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTIDGTRVLTAEECASVVTVADALALGRAVSDELEAQGA 315 Query: 302 KNV 304 + Sbjct: 316 LEI 318 >gi|167585805|ref|ZP_02378193.1| porphobilinogen deaminase [Burkholderia ubonensis Bu] Length = 328 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 107/303 (35%), Positives = 164/303 (54%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 71 VKELENALADGRADLAVHSLKDVPMALPDGFSLAAIMTREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL + Sbjct: 131 AVVGTSSLRREAMLRARYPHLQVQPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLDAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ ++ ++D PP+ GQGA+ IE + + ++ T +V ER L GSC Sbjct: 191 IRALIGVDDSPPAAGQGALGIEIASHRADVAAWLAPLHDHATALAVEAERMVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301 + +A A + LY G V +DGK + DA+ +GR A + Sbjct: 251 EVPLAAHAVWRAGELYLTGRVSTTDGKRVLTSEECASVMTVADALALGRAVADALEAQGA 310 Query: 302 KNV 304 ++ Sbjct: 311 LDI 313 >gi|325282435|ref|YP_004254976.1| Porphobilinogen deaminase [Deinococcus proteolyticus MRP] gi|324314244|gb|ADY25359.1| Porphobilinogen deaminase [Deinococcus proteolyticus MRP] Length = 310 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 100/307 (32%), Positives = 160/307 (52%), Gaps = 5/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR--TLTEIGG 60 + +GTR S LAL+ L + + P I ++TKGD+ ++ + G Sbjct: 1 MRTVTVGTRGSTLALSQTRWVVERLKE--QWPETEFRIQTITTKGDKNRASLQSMAKAGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLK 119 KG + +EI+ L++ ID AVHS KD+PT+ +GL I++ R D RDV + +SL Sbjct: 59 KGFWIKEIQDALLAKSIDIAVHSLKDLPTEQTEGLDIASIPKRADARDVLVGAEGFKSLA 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL + IGTSS+RR+A L +R D+ VI RG IETR+ + ++ A++LA AG+ R Sbjct: 119 DLPQGARIGTSSVRRRAFLKAFRPDLQVIPVRGNIETRMAAVASDDYDAVILAGAGLIRT 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E ++ + P+PGQGA+ +E ++ E+ IN T D + ER FLA Sbjct: 179 DQRHRADEFVSTDILLPAPGQGALALEVRADDDLIAEVAYAINDAVTDDRITAEREFLAG 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L C + + FA KG L G V A DG + + +G+ + ++G + A+ + Sbjct: 239 LGAGCLAPVGAFATVKGDLLTLEGWVGAVDGSEVIKATTSGDASECADLGAELAEDMLSQ 298 Query: 300 SNKNVFN 306 + + Sbjct: 299 GAQRLIE 305 >gi|221211567|ref|ZP_03584546.1| porphobilinogen deaminase [Burkholderia multivorans CGD1] gi|221168928|gb|EEE01396.1| porphobilinogen deaminase [Burkholderia multivorans CGD1] Length = 333 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 165/303 (54%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 76 VKELESALADGRADLAVHSLKDVPMMLPDGFALAAIMRREDPRDAFVSNDYASLDALPAG 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V+ RG ++TRL+KL+ AI+LA AG+KRL E Sbjct: 136 AVVGTSSLRREAMLRARYPQLQVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEAR 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++ED PP+ GQGA+ IE + ++ ++ T +V ER L GSC Sbjct: 196 IRALLDVEDSPPAAGQGALGIEIAAHRTDVAAWLEPLHDAQTALAVEAERMVSRALGGSC 255 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISN 301 + +A A + LY G V DG + DA+ +GR + + Sbjct: 256 EVPLAAHAVWRAGELYLTGRVSTIDGTRVLTAEECASVVTVADALALGRAVSDELEAQGA 315 Query: 302 KNV 304 + Sbjct: 316 LEI 318 >gi|15924660|ref|NP_372194.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Mu50] gi|15927249|ref|NP_374782.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus N315] gi|148268151|ref|YP_001247094.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus JH9] gi|150394218|ref|YP_001316893.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus JH1] gi|156979988|ref|YP_001442247.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Mu3] gi|253317186|ref|ZP_04840399.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006455|ref|ZP_05145056.2| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257794056|ref|ZP_05643035.1| porphobilinogen deaminase [Staphylococcus aureus A9781] gi|258415760|ref|ZP_05682031.1| porphobilinogen deaminase [Staphylococcus aureus A9763] gi|258422003|ref|ZP_05684923.1| porphobilinogen deaminase [Staphylococcus aureus A9719] gi|258438239|ref|ZP_05689523.1| porphobilinogen deaminase [Staphylococcus aureus A9299] gi|258443697|ref|ZP_05692036.1| porphobilinogen deaminase [Staphylococcus aureus A8115] gi|258444935|ref|ZP_05693255.1| porphobilinogen deaminase [Staphylococcus aureus A6300] gi|258447989|ref|ZP_05696121.1| porphobilinogen deaminase [Staphylococcus aureus A6224] gi|258454303|ref|ZP_05702272.1| porphobilinogen deaminase [Staphylococcus aureus A5937] gi|269203288|ref|YP_003282557.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus ED98] gi|282893166|ref|ZP_06301400.1| porphobilinogen deaminase [Staphylococcus aureus A8117] gi|282929344|ref|ZP_06336911.1| porphobilinogen deaminase [Staphylococcus aureus A10102] gi|295405981|ref|ZP_06815789.1| porphobilinogen deaminase [Staphylococcus aureus A8819] gi|296274902|ref|ZP_06857409.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus MR1] gi|297245093|ref|ZP_06928970.1| porphobilinogen deaminase [Staphylococcus aureus A8796] gi|54037282|sp|P64341|HEM3_STAAN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|54041349|sp|P64340|HEM3_STAAM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166217788|sp|A7X391|HEM3_STAA1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189028098|sp|A6U2D8|HEM3_STAA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189028160|sp|A5ITJ5|HEM3_STAA9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|13701467|dbj|BAB42761.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus N315] gi|14247442|dbj|BAB57832.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Mu50] gi|147741220|gb|ABQ49518.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus JH9] gi|149946670|gb|ABR52606.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus JH1] gi|156722123|dbj|BAF78540.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus Mu3] gi|257788028|gb|EEV26368.1| porphobilinogen deaminase [Staphylococcus aureus A9781] gi|257839353|gb|EEV63826.1| porphobilinogen deaminase [Staphylococcus aureus A9763] gi|257842047|gb|EEV66476.1| porphobilinogen deaminase [Staphylococcus aureus A9719] gi|257848283|gb|EEV72274.1| porphobilinogen deaminase [Staphylococcus aureus A9299] gi|257851103|gb|EEV75046.1| porphobilinogen deaminase [Staphylococcus aureus A8115] gi|257856143|gb|EEV79058.1| porphobilinogen deaminase [Staphylococcus aureus A6300] gi|257858750|gb|EEV81621.1| porphobilinogen deaminase [Staphylococcus aureus A6224] gi|257863533|gb|EEV86292.1| porphobilinogen deaminase [Staphylococcus aureus A5937] gi|262075578|gb|ACY11551.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus ED98] gi|282589076|gb|EFB94177.1| porphobilinogen deaminase [Staphylococcus aureus A10102] gi|282764484|gb|EFC04610.1| porphobilinogen deaminase [Staphylococcus aureus A8117] gi|285817354|gb|ADC37841.1| Porphobilinogen deaminase [Staphylococcus aureus 04-02981] gi|294968978|gb|EFG44999.1| porphobilinogen deaminase [Staphylococcus aureus A8819] gi|297178173|gb|EFH37421.1| porphobilinogen deaminase [Staphylococcus aureus A8796] gi|312830049|emb|CBX34891.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315130698|gb|EFT86684.1| porphobilinogen deaminase [Staphylococcus aureus subsp. aureus CGS03] gi|329727593|gb|EGG64049.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus 21172] Length = 308 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 168/305 (55%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + + L V P I I + TKGDRI ++ L+++GGKG Sbjct: 1 MRKLVVGSRRSKLALTQSQQFINKLKAVE--PNLEIEIKEIVTKGDRIVDKQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L ID A+HS KD+P+ + +GL + RE D +IS T L L Sbjct: 59 LFVKEIQHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ Sbjct: 119 EGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ L+ + P+ GQGA+ IE ++ + L+ +++++ V ER FLAE+D Sbjct: 179 DDIVTSYLDRDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMD 238 Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ IAG+A + F G+++ DGK E + NG D + +G+ + ++ Sbjct: 239 GSCQVPIAGYATISDQKEIEFTGLIMTPDGKERFEYTMNGT--DPVELGKTVSNKLKEQG 296 Query: 301 NKNVF 305 + Sbjct: 297 AYEII 301 >gi|307720830|ref|YP_003891970.1| hydroxymethylbilane synthase [Sulfurimonas autotrophica DSM 16294] gi|306978923|gb|ADN08958.1| hydroxymethylbilane synthase [Sulfurimonas autotrophica DSM 16294] Length = 319 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 103/305 (33%), Positives = 170/305 (55%), Gaps = 4/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR S LAL A+ + + + P +V+ + + GD++ ++ L IGGKG Sbjct: 1 MKKLTIATRVSDLALWQAYHIKERVEVNY--PEIEVVLNKIVSNGDKVLDKPLALIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 FT+E+E ++++G + AVHS KD+PT + GL++ A R+D DVF+SHT +L DL Sbjct: 59 HFTKELEDEMLAGNAELAVHSLKDVPTYIPDGLELVAVTQRQDQSDVFLSHTYATLDDLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-- 180 +V+GT+SLRR+ LL+ R D+ V D RG + TRL KL + AI+LA+ G+ RL Sbjct: 119 KGAVVGTTSLRRRMQLLQKRPDLKVKDLRGNVNTRLRKLKEGQYDAIILAWIGLNRLDLL 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K+ + L+++ P GQ A+ IE +N K +E+ K +N EDT+ ER F++++ Sbjct: 179 KDIPYTQKLSLDMMIPPMGQAALGIEIISDNEKVREIAKSLNDEDTFTCTQIERDFISKI 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C + +A A G + F ++ DG + ++ ++ N+G++ AQ + Sbjct: 239 GAGCSAPVACNAVIDGDNVVFRTMIGFPDGTNIMQKKVVKSKNESENLGKELAQKMINNG 298 Query: 301 NKNVF 305 + Sbjct: 299 ALKLL 303 >gi|168057909|ref|XP_001780954.1| predicted protein [Physcomitrella patens subsp. patens] gi|162667588|gb|EDQ54214.1| predicted protein [Physcomitrella patens subsp. patens] Length = 299 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 127/299 (42%), Positives = 179/299 (59%), Gaps = 4/299 (1%) Query: 13 SPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEK 70 SPLALA A++TR L H + II + T GD+I ++ L +IGGKGLFT+EI+ Sbjct: 1 SPLALAQAYQTRDKLKAAHPGLAEEGALEIIIIKTTGDKILSQPLADIGGKGLFTKEIDD 60 Query: 71 KLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTS 130 L++G+ID AVHS KD+PT L +G + LPRED+RD FI SL +L SV+G++ Sbjct: 61 ALLNGDIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICPNYSSLAELPEGSVVGSA 120 Query: 131 SLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILN 190 SLRR++ +L + V +FRG ++TRL KL+ A LLA AG+KRL + I IL Sbjct: 121 SLRRQSQILHKYPHLKVENFRGNVQTRLRKLSEGTVQATLLALAGLKRLDMTEHITAILA 180 Query: 191 IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250 +D P+ QGAI I + K +E + +NHE T +++CERAFLA+LDGSC++ IAG Sbjct: 181 TDDMLPAIAQGAIGIACRTGDSKMEEYLASLNHEGTRLAISCERAFLAKLDGSCRTPIAG 240 Query: 251 FAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINIGRDAAQYIRFISNKNVFNF 307 A F G+V +DGK E SR G + D I + +DA + + + F + Sbjct: 241 LAERTEDGCSFRGLVATTDGKQVLETSRKGSFSYDDMIALAQDAGAELISRAGPDFFKW 299 >gi|87117970|gb|ABD20292.1| HemC [Shigella boydii] gi|87118022|gb|ABD20318.1| HemC [Shigella flexneri] gi|87118024|gb|ABD20319.1| HemC [Shigella flexneri] gi|87118026|gb|ABD20320.1| HemC [Shigella flexneri] gi|87118028|gb|ABD20321.1| HemC [Shigella flexneri] gi|87118034|gb|ABD20324.1| HemC [Shigella flexneri] gi|87118038|gb|ABD20326.1| HemC [Shigella flexneri] gi|87118040|gb|ABD20327.1| HemC [Shigella flexneri] Length = 272 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 99/267 (37%), Positives = 147/267 (55%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + + Sbjct: 6 PGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 65 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG Sbjct: 66 GLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTR 185 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 +EL+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 186 TRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLCALVGAPDGSQI 245 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300 R G DA +G A+ + Sbjct: 246 IRGERRGAPQDAEQMGISLAEELLNNG 272 >gi|121595211|ref|YP_987107.1| porphobilinogen deaminase [Acidovorax sp. JS42] gi|120607291|gb|ABM43031.1| porphobilinogen deaminase [Acidovorax sp. JS42] Length = 320 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 106/300 (35%), Positives = 155/300 (51%), Gaps = 8/300 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A +S L H + ++ ++T+GD+I +RTL+++GGKGLF Sbjct: 21 IVIATRESQLALWQAEHVQSLLRAR----GHAVALLGMTTRGDQILDRTLSKVGGKGLFV 76 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P +L +G ++ + RED RD F+S SL +L + Sbjct: 77 KELEVALEEGRADIAVHSLKDVPMELPQGFALACVMEREDPRDAFVSPGYASLDELPHGA 136 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ALL R D+ + RG ++TRL KL+ + AI+LA AG+KRL + I Sbjct: 137 VVGTSSLRRQALLQALRPDLQIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHERI 196 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + E P+ GQGA+ IE + +E + + HE TW +V ERA + GSC Sbjct: 197 RAVFTPEQMLPAAGQGALGIEIRGDRHDLREALAPLAHERTWLTVTAERAVSRAMGGSCS 256 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNR---CDAINIGRDAAQYIRFISN 301 +A G TL ++ A +G A +R Sbjct: 257 MPLAAHGQWDGDTLSLRAAWGDVAARVPLVRAEGAAPVHTLEQADALGLAVAAQLRTAGA 316 >gi|163848145|ref|YP_001636189.1| porphobilinogen deaminase [Chloroflexus aurantiacus J-10-fl] gi|222526046|ref|YP_002570517.1| porphobilinogen deaminase [Chloroflexus sp. Y-400-fl] gi|163669434|gb|ABY35800.1| porphobilinogen deaminase [Chloroflexus aurantiacus J-10-fl] gi|222449925|gb|ACM54191.1| porphobilinogen deaminase [Chloroflexus sp. Y-400-fl] Length = 324 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 94/310 (30%), Positives = 149/310 (48%), Gaps = 14/310 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LA + +L P + + +ST GDR+ + L+ +G KGLF +E Sbjct: 6 LGTRGSALARVQSVWVADALRTA--FPSLEVELRIISTTGDRVLDVALSAVGDKGLFVKE 63 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL---ALH 124 +E L++ E+D VHSAKDMPT GL ++A+ R D RDV + A DL Sbjct: 64 LEHALLASEVDLCVHSAKDMPTATPDGLVLAAFPVRVDPRDVLVVRQAGLGTDLATLPAG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSSLRR + + R D+ + D RG ++TRL KL + + A++LA AG++RL Sbjct: 124 ARVGTSSLRRTSQVRHHRPDLQLTDVRGNVDTRLRKLASGQYDALILAAAGLRRLGLWDG 183 Query: 185 IK---------EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 L P+ QG + IET ++ + LV+ ++ + ERA Sbjct: 184 TPGAQIGEAVVYPLEPSVMLPAVAQGILAIETRADDEATRTLVESLDDPAARAAALAERA 243 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 L L+G C+ +A A + ++ G+V DG + G+ A +G A+ Sbjct: 244 LLRRLEGGCQIPVAAHAVMTDTGMHLRGMVGTLDGSTLVFAEQTGDPAQAEALGVAVAEE 303 Query: 296 IRFISNKNVF 305 + + Sbjct: 304 LLARGGDAIL 313 >gi|172058146|ref|YP_001814606.1| porphobilinogen deaminase [Exiguobacterium sibiricum 255-15] gi|254800251|sp|B1YJV1|HEM3_EXIS2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|171990667|gb|ACB61589.1| porphobilinogen deaminase [Exiguobacterium sibiricum 255-15] Length = 308 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 163/305 (53%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LA+ L P+ I + TKGDRI + TL+++GGKG Sbjct: 1 MRKIIVGSRSSKLAMTQTKWVIEQLKQAGA--PYEFEIKNIITKGDRILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+++I +ID AVHS KD+P++L GL I A R D RD I+ T L L Sbjct: 59 LFVKEIEQQMIDEDIDFAVHSMKDLPSELPTGLIIGATPSRVDARDALITTTGGGLDSLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 +++GTSSLRR + LL+ R D+ + RG I+TRL KL ILLA AG++R+ Sbjct: 119 EGAIVGTSSLRRGSQLLKLRPDLKIESIRGNIDTRLEKLKTGPFDGILLAAAGLQRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E ++ E ++ +D P+ GQG + IE N+ + ++L+ +I+ + T ER+FLA ++ Sbjct: 179 EDIVSEYISTDDMIPAVGQGILAIECRANDQEVRDLLNLIHDQMTEKVAFAERSFLAAIE 238 Query: 242 GSCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC + GFA + G + + DG+ D + +G+ A + Sbjct: 239 GSCHVPVGGFATINEDLSTTLVGFLGSVDGQQILLERETS--LDPMQLGQTVATRLLDAG 296 Query: 301 NKNVF 305 + + Sbjct: 297 GREIL 301 >gi|307636930|gb|ADN79380.1| porphobilinogen deaminase [Helicobacter pylori 908] gi|325997118|gb|ADZ49326.1| Porphobilinogen deaminase [Helicobacter pylori 2017] Length = 306 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 97/303 (32%), Positives = 153/303 (50%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IG+R S LAL A + L I + TKGD+I + L++IGGKGLF Sbjct: 3 KLVIGSRGSELALWQANHIKERLKKECS---MESEIRIVKTKGDKILDTPLSKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L Sbjct: 60 TKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEK 183 + +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL + Sbjct: 120 AKVGTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ ++++ PS GQGA+ +E N+ L + +N E++ + ER F+ L+G Sbjct: 180 KYRKAFSVKEMIPSMGQGALGVEMLKNHKHFITL-QKLNDEESAFCCHLEREFIKGLNGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I A G + ++ +GK + G++ A ++ R+ + K Sbjct: 239 CQIPIGVHANLMGDEVKIQAVLGLPNGKEVITKEKQGDKNKAFDLVRELLEEFLQSGAKE 298 Query: 304 VFN 306 + Sbjct: 299 ILE 301 >gi|167644091|ref|YP_001681754.1| porphobilinogen deaminase [Caulobacter sp. K31] gi|189042878|sp|B0T287|HEM3_CAUSK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|167346521|gb|ABZ69256.1| porphobilinogen deaminase [Caulobacter sp. K31] Length = 318 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 118/316 (37%), Positives = 169/316 (53%), Gaps = 12/316 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDV-HKIPPHNI----VIIPLSTKGDRITNRTL 55 M ++P RIG R S L+LA + ++ + P +I +IP+ T GDRI +R L Sbjct: 1 MSRQPIRIGARGSKLSLAQSGLMQARIAAALGAGPGDDIDAFAQLIPIVTSGDRIQDRRL 60 Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115 EIGGKGLFT+EIE+ L+ G IDCA+HS KDMP +L GL ++A RED RD FISH A Sbjct: 61 MEIGGKGLFTKEIEEALLDGRIDCAIHSLKDMPAELPPGLVLAAVPEREDPRDAFISHVA 120 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 + L+DL+ + +GT+SLRR+A L R D+ ++ RG ++TRL KL +A AILLA +G Sbjct: 121 ERLEDLSKGARLGTASLRRQAQALHVRPDLEIVMLRGNVDTRLAKLERGEADAILLAQSG 180 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + RL + L+ PP+PGQGA+ IET ++ + + T +V ER Sbjct: 181 LNRLGLGHITNSWLDPLAAPPAPGQGALVIETR-AEDVDLPWLQAVRCQATTLAVAAERG 239 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN------RCDAINIG 289 L L+GSC++A+ A G L L DG + A +G Sbjct: 240 ALYALEGSCRTAVGAHARLDGLILTMIVEALTPDGVQRFRREGSATLSSLDAADQARALG 299 Query: 290 RDAAQYIRFISNKNVF 305 + +R + Sbjct: 300 LELGGAVRAEGGPALI 315 >gi|269926448|ref|YP_003323071.1| porphobilinogen deaminase [Thermobaculum terrenum ATCC BAA-798] gi|269790108|gb|ACZ42249.1| porphobilinogen deaminase [Thermobaculum terrenum ATCC BAA-798] Length = 300 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 87/298 (29%), Positives = 149/298 (50%), Gaps = 4/298 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K ++GTR S LAL + L ++ P + + DR + ++ IG G Sbjct: 1 MKVIKVGTRGSKLALWQTQWVINRLRSLY--PGFQFEPVVIKVTSDRSPDAPISAIGQVG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT++IE+ L++G+I AVHS KD+PT G I+A+ RED RD + Q + D Sbjct: 59 VFTKDIEQALLAGDIHLAVHSLKDLPTLSTPGTVIAAFTEREDPRDCILWPKGQPMPD-L 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +S +GTSS+RR AL+ + + +V++ RG ++TR+ K+ +L+AYA +KR+ Sbjct: 118 NNSRVGTSSVRRSALVRSYWPNANVVNLRGNVDTRVRKMLEGNYDVVLMAYAAVKRMD-L 176 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V + L ++ + PS GQG I ++ ++ + ++ IN + + ER+ + L G Sbjct: 177 PVEFKPLPLDSWVPSAGQGIIAVQAREDDQQIIGMLNAINFFPSKVAYLAERSLMRALGG 236 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C + +A L G+V A DG R A ++G A+ + + Sbjct: 237 GCSMPVGAYAELHDGELSLIGMVAAPDGSQVVITRRVDTPDQADHLGERVAREMLDLG 294 >gi|254508818|ref|ZP_05120929.1| porphobilinogen deaminase [Vibrio parahaemolyticus 16] gi|219548275|gb|EED25289.1| porphobilinogen deaminase [Vibrio parahaemolyticus 16] Length = 271 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 96/263 (36%), Positives = 150/263 (57%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 + TKGD I + L ++GGKGLF +E+E ++ G D AVHS KD+P +GL + Sbjct: 1 MVTKGDIILDTPLAKVGGKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICE 60 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 RED RD F+S+T ++ +L +V+GT SLRR+ + +R D+ + + RG + TRL KL+ Sbjct: 61 REDPRDAFVSNTYNNIDELPHGAVVGTCSLRRQCQIKEYRPDLVIKELRGNVGTRLGKLD 120 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 + AI+LA AG+KRL+ E+ I+ + E P+ GQGA+ IE +++ + +L++ +N Sbjct: 121 AGEYDAIILAAAGLKRLELEERIRSFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLN 180 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 H+DT D V CERA L+G C+ I +A G ++ +V DG G R Sbjct: 181 HQDTADRVLCERAMNLTLEGGCQVPIGSYALLDGDEIWLRALVGEPDGSEIVRGEIKGAR 240 Query: 283 CDAINIGRDAAQYIRFISNKNVF 305 DA N+G A + + + Sbjct: 241 ADAENLGVTLANQLLDKGAREIL 263 >gi|300703401|ref|YP_003745003.1| hydroxymethylbilane synthase [Ralstonia solanacearum CFBP2957] gi|299071064|emb|CBJ42373.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Ralstonia solanacearum CFBP2957] Length = 334 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 104/304 (34%), Positives = 160/304 (52%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I +R S LA+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF Sbjct: 22 LVIASRESRLAMWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLFV 79 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P +L G + A L RED RD F+S+ L L + Sbjct: 80 KELEVALAEGRADLAVHSLKDVPMELPPGFALPAILEREDPRDAFVSNQYADLAALPAGA 139 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+A L + + RG ++TRL KL+ AI+LA AG+KRL + I Sbjct: 140 VVGTSSLRREASLRARFPHLVIQPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLSERI 199 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ + P+ GQGA+ IET + Q + ++H T +V ERA L GSC+ Sbjct: 200 RAVIASDVSLPAAGQGALGIETRADRTDVQAWLAPLHHLPTALAVTAERAVSRRLGGSCQ 259 Query: 246 SAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISN 301 +A FA+ L V + DG+ +A +G AQ + Sbjct: 260 VPLAAFAHWTDAGALRLRAFVASQDGRRKLAAEGEATPATLAEAEALGAHVAQQMLDGGA 319 Query: 302 KNVF 305 +++ Sbjct: 320 RDIL 323 >gi|193215989|ref|YP_001997188.1| porphobilinogen deaminase [Chloroherpeton thalassium ATCC 35110] gi|238058923|sp|B3QWI1|HEM3_CHLT3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|193089466|gb|ACF14741.1| porphobilinogen deaminase [Chloroherpeton thalassium ATCC 35110] Length = 314 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 120/295 (40%), Positives = 172/295 (58%), Gaps = 6/295 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK IGTR SPLAL A ++ L + P +I + + T GD+I + L +IG K Sbjct: 1 MKKALIIGTRSSPLALWQAEFIKAELSKHY--PSLDISLRHIKTTGDKILDAPLAKIGDK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT EIE ++ EID AVHS KD+PT+ +GL I+A RED RDV IS +LK L Sbjct: 59 GLFTREIEHVMLRNEIDLAVHSLKDLPTETPEGLVITAITEREDNRDVLISKGKYTLKTL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +++ TSSLRR++ LL R D+ VID RG + TR + A A+LLA+AG+ RL+ Sbjct: 119 PQGAIVATSSLRRRSQLLHLRPDLEVIDMRGNLNTRFKRFEEGDAEAMLLAFAGVHRLEF 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I EI++ +D P+ GQGA+ IET +++ + +EL+KV+NH +T CER+ L L+ Sbjct: 179 SEHIAEIISFDDILPAVGQGALGIETRIDDEETRELLKVLNHAETELCTKCERSLLRTLE 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN----GNRCDAINIGRDA 292 G C+ I A + T +F V + DGK + S + +A IG + Sbjct: 239 GGCQIPIGAHARIENGTFHFATYVGSIDGKRAIKKSLSRENVTTVEEAEQIGIEV 293 >gi|254467792|ref|ZP_05081198.1| porphobilinogen deaminase [beta proteobacterium KB13] gi|207086602|gb|EDZ63885.1| porphobilinogen deaminase [beta proteobacterium KB13] Length = 292 Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 153/289 (52%), Gaps = 2/289 (0%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + A + + + P + ++ T+GD I ++ L EIGGKGLF +E+E L++ + Sbjct: 1 MWQANYIADRIREKY--PDTEVNVLSFKTQGDIILDQPLAEIGGKGLFIKELEHALLNDD 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 D AVHS KD+P L + +I A RE+ D FIS+ SL DL +VIGTSSLRR++ Sbjct: 59 ADLAVHSMKDVPMDLPEPFEICAISERENPSDAFISNKYASLDDLPQDAVIGTSSLRRQS 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 L+ R D+ + RG ++TRL KL++ AI+LA AG+ RL E IK L+++ + P Sbjct: 119 LIKHTRPDLIIESLRGNLQTRLKKLDSGIYDAIILASAGLIRLNLENRIKSTLDVKQYIP 178 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 S GQGA+ IE N + +E + +N E T V ER L GSC + A K Sbjct: 179 SVGQGALGIEILKNKSEVKEFLDFLNDEQTQIQVEAERKISKTLAGSCTVPMGAHASIKN 238 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + L V + DG + G + +++ + AQ + KN+ Sbjct: 239 NLLTIQAFVSSPDGIKMIRATDTGPCSEHLSLANNVAQSLIDQGAKNIL 287 >gi|332291690|ref|YP_004430299.1| porphobilinogen deaminase [Krokinobacter diaphorus 4H-3-7-5] gi|332169776|gb|AEE19031.1| porphobilinogen deaminase [Krokinobacter diaphorus 4H-3-7-5] Length = 304 Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 95/304 (31%), Positives = 146/304 (48%), Gaps = 10/304 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A +S L + ++P+ + GD I ++ L E+G Sbjct: 1 MS-KTIRIGTRDSELALWQAKTVQSQLEAN----GYKTELVPVKSTGDLILDKPLYELGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ +++G +D AVHS KD+PT L G+ +A LPR + D+ + D Sbjct: 56 TGIFTKTLDVAMLNGIVDIAVHSMKDVPTALPIGIVQAAVLPRAETEDILVHKG---APD 112 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 I T SLRR+A L + D RG + TRL KL + + A AG+KR+ Sbjct: 113 YKQACTIATGSLRRQAQWLNRYPNHKTTDIRGNVNTRLQKLEESDWTGAIFAKAGLKRIN 172 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ ++ P+P QGA+ I + E +NH+ T ER FL L Sbjct: 173 VLPENYEV--LDWMIPAPAQGAMLIVAMEEDQFCLEACATLNHKPTALCTYIEREFLKTL 230 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C + I A G + F G++ + DG EV + ++ +A+ G D A I Sbjct: 231 EGGCTAPIGALAEEIGDDIRFRGVLFSLDGATKIEVEQVVSKANAVGFGTDCALDILDDG 290 Query: 301 NKNV 304 + + Sbjct: 291 GREL 294 >gi|70726258|ref|YP_253172.1| porphobilinogen deaminase [Staphylococcus haemolyticus JCSC1435] gi|123748643|sp|Q4L709|HEM3_STAHJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|68446982|dbj|BAE04566.1| porphobilinogen deaminase [Staphylococcus haemolyticus JCSC1435] Length = 310 Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 101/305 (33%), Positives = 169/305 (55%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L V P I I + TKGDRI N+ L+++GGKG Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDKLKAV--DPTLEIEIKEIVTKGDRIVNKQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+++L EID A+HS KD+P+ + +GL + RE D +IS L +L Sbjct: 59 LFVKEIQQELFDKEIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHIPLNELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S+IGTSSLRR A +L ++ + RG I+TRL KL AI+LA AG++R+ Sbjct: 119 DGSIIGTSSLRRGAQILSKYPNLEIKWIRGNIDTRLKKLEIEDYDAIILAAAGLRRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ L+ + P+ GQGA+ IE ++ + EL+ ++++ + V ER FL+ +D Sbjct: 179 DDIVTTYLDKDILLPAIGQGALGIECRSDDVELLELLSKVHNQAVANCVTAERTFLSAMD 238 Query: 242 GSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ I G+A + + F G+++ DG +E + G + +++G ++ ++ Sbjct: 239 GSCQVPIGGYATNKENGEIEFTGLIMTPDGTKRYEHTEVGK--NPVDLGEAVSRVLKEQG 296 Query: 301 NKNVF 305 + Sbjct: 297 AYEII 301 >gi|124027712|ref|YP_001013032.1| porphobilinogen deaminase [Hyperthermus butylicus DSM 5456] gi|158513943|sp|A2BL26|HEM3_HYPBU RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123978406|gb|ABM80687.1| Porphobilinogen deaminase [Hyperthermus butylicus DSM 5456] Length = 303 Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 94/301 (31%), Positives = 155/301 (51%), Gaps = 5/301 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+ TR S L++A ++ V P ++ + T+GD ++ T IGGKGLF Sbjct: 2 KLRVATRGSKLSIAQTMIALEAIKRVE--PSLEYELVIVKTRGDIHQDKPFTAIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH--TAQSLKDLA 122 +E+ ++ G D AVHS KD+P+ + GL ++ PR+ DV + +++ DL Sbjct: 60 EKEVNLAVLEGRADIAVHSLKDVPSAISPGLVLAMTPPRDPPYDVLVVRGGKEKTIWDLP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +++GTSS RR A+L R D+ RG ++TRL KL + AI+LA AG+KRL + Sbjct: 120 SGAIVGTSSARRVAMLKHVRRDLVFKVLRGNVDTRLRKLEQGQYDAIVLAEAGLKRLGVD 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + PP+PGQG I + T + +++ + + ERAFLA G Sbjct: 180 IEYW-RIPPDILPPAPGQGIIGVYTLSSRSDILPILEKASDQKAMAEARAERAFLAYAGG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C + + +A +G+TLYF+ + + DG EV G+ +G +AA +R ++ + Sbjct: 239 GCHTPLGAYAELRGNTLYFHAALASPDGSRRVEVRVEGDPDKPTQVGLEAAFELRRLAAR 298 Query: 303 N 303 Sbjct: 299 E 299 >gi|297197348|ref|ZP_06914745.1| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083] gi|297146690|gb|EDY58887.2| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083] Length = 314 Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 101/304 (33%), Positives = 151/304 (49%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA RS L ++ P ++P+ T GD+ L+++ GKG FT Sbjct: 10 IRIVSRDSPMALAQVERVRSELTALY--PGVRTEVVPVRTTGDKWMG-DLSKVEGKGAFT 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +A+L R+DIRD I +L +L Sbjct: 67 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTTFAAFLKRDDIRDALIHPGGLTLDELPE 126 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSS+RR A L + + FRG RL KL +A A+LLA AG++R+ ++ Sbjct: 127 GTRVGTSSVRRVAQLAATHPHLECVPFRGNANRRLAKLEAGEADALLLAVAGLERIGRQD 186 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI E+L+ E P G G + ++ + + + V + DT+ ER FL L G Sbjct: 187 VISEVLSPETMMPPIGAGILGLQCREGDTELIDAVSALGDPDTYREATAERMFLHVLQGH 246 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG+A G L V DGK R D +G A + + Sbjct: 247 CNSPIAGYARVDHGDELSLRACVFTPDGKTRLNAHEWAGRLDPATLGTSVAVALLRQGAR 306 Query: 303 NVFN 306 + + Sbjct: 307 EIID 310 >gi|325262509|ref|ZP_08129246.1| hydroxymethylbilane synthase [Clostridium sp. D5] gi|324032341|gb|EGB93619.1| hydroxymethylbilane synthase [Clostridium sp. D5] Length = 293 Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 100/299 (33%), Positives = 151/299 (50%), Gaps = 7/299 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIG+R S LA+ A + + H P + ++ + T GD+I +++L IGG Sbjct: 1 MSS-VIRIGSRESRLAVIQAEIVKELIQKNH--PDIQVELVTMKTTGDKILDKSLELIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E++K L+ G ID +VHS KDMP ++ K L I+AY RED RD I + Sbjct: 58 KGLFVKELDKALLEGSIDISVHSLKDMPMEIPKELPIAAYSKREDPRDALICRPGC--CE 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + + VIGTSS RR L + + + RG ++TRL KL +LA AG+ RL Sbjct: 116 IPVDGVIGTSSRRRSLQLKKLYPECTFRQIRGNVQTRLRKLEEEGYDGTILAAAGLSRLN 175 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E VI I + E+ P+ GQG + ++ + + ++ + ER F+A L Sbjct: 176 MEHVIGRIFSTEEMIPAAGQGILAVQGRKGEDHFF--LDCVENKKSRAEALAEREFVAVL 233 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DG C S +A A G+ L G+ + + +R GN DA +G A+ +R Sbjct: 234 DGGCTSPVAAHAEVNGNELKLTGLYYREEDDTYWTETRIGNTADARQLGAALAEEMRRR 292 >gi|222111550|ref|YP_002553814.1| porphobilinogen deaminase [Acidovorax ebreus TPSY] gi|221730994|gb|ACM33814.1| porphobilinogen deaminase [Acidovorax ebreus TPSY] Length = 310 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 105/300 (35%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A +S L H + ++ ++T+GD+I +RTL+++GGKGLF Sbjct: 11 IVIATRESQLALWQAEHVQSLLRAR----GHAVALLGMTTRGDQILDRTLSKVGGKGLFV 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P +L +G ++ + RED RD F+S SL +L + Sbjct: 67 KELEVALEEGRADIAVHSLKDVPMELPQGFALACVMEREDPRDAFVSPGYASLDELPHGA 126 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL + I Sbjct: 127 VVGTSSLRRQVLLQALRPDLQIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHERI 186 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + E P+ GQGA+ IE + +E + + HE TW +V ERA + GSC Sbjct: 187 RAVFTPEQMLPAAGQGALGIEIRGDRHDLREALAPLAHERTWLTVTAERAVSRAMGGSCS 246 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNR---CDAINIGRDAAQYIRFISN 301 +A G TL ++ A +G A +R Sbjct: 247 MPLAAHGQWDGDTLSLRAAWGDVAARVPLVRAEGAAPVHTLEQADALGLAVAAQLRTAGA 306 >gi|260588741|ref|ZP_05854654.1| hydroxymethylbilane synthase [Blautia hansenii DSM 20583] gi|260540923|gb|EEX21492.1| hydroxymethylbilane synthase [Blautia hansenii DSM 20583] Length = 296 Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats. Identities = 91/298 (30%), Positives = 149/298 (50%), Gaps = 6/298 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + IG+R S LA+ + R + + + + I+ + T GD+I +RTL +IGGKG Sbjct: 1 MRKVVIGSRESKLAVVQSEMVRDYIRENNA--DIQVEILTMKTTGDKILDRTLDKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E++K L+ + + +VHS KDMP ++ + L + A+ RED RDV + + D Sbjct: 59 LFVKELDKALMERKTELSVHSLKDMPMEVPEELPLIAFSKREDPRDVLVLPKGVTQLD-- 116 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 IG SSLRR L D+ RG ++TRL KL++ + +LLA AG+KRL E Sbjct: 117 TSKPIGCSSLRRILQLKEIFPDMECKSVRGNVQTRLKKLDDGEYSGLLLAAAGLKRLGLE 176 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E+ P+ GQG + I+ + +K E+ + ERAF+ L+G Sbjct: 177 DRIARYFEPEEMIPAAGQGILAIQGRKDVD--YSYLKGYGDENATYAALAERAFVRYLNG 234 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C S +A A + + G+ + + + + G+ A +G A+ ++ S Sbjct: 235 GCSSPVAAHARVEDGQIILRGLYYDENTGNYEKGLKKGSAEAAEELGISLAKELQERS 292 >gi|223040967|ref|ZP_03611228.1| porphobilinogen deaminase [Campylobacter rectus RM3267] gi|222877764|gb|EEF12884.1| porphobilinogen deaminase [Campylobacter rectus RM3267] Length = 309 Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats. Identities = 100/307 (32%), Positives = 156/307 (50%), Gaps = 7/307 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK +I TR S LA+ + R ++ + P + + + TKGD I + L +IGG Sbjct: 1 MEK--LKIATRKSVLAMWQSEHIRDKILSRY--PELAVELTGMKTKGDVILDTPLAKIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E ++SGE AVHS KD+P +GL ++A RED+RD +S +D Sbjct: 57 KGLFTKELEDSMLSGETHIAVHSLKDVPVVFPEGLVLAAICSREDVRDAMLSEKYAKFED 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRRK LL R D+ +I RG ++TRL KL + AI+LA AG+ RL Sbjct: 117 LPEGARVGTTSLRRKMQLLAMRPDLEIISLRGNVQTRLRKLKEGEFDAIILAMAGVNRLN 176 Query: 181 KEKVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + I+ ++ P+ GQGA+ IE + + L++ + E ER F+A Sbjct: 177 LRSEVAHIVPFELDQMIPAMGQGALGIEAR-EDAEILNLIEFLKDEKAVIETTVERDFVA 235 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+G C+ I A G + +V DG + + + ++G + + Sbjct: 236 MLEGGCQVPIGVNANLNGDKIEIRAVVGLPDGSESIRENIVAQKSEWKSVGAELGRIFIG 295 Query: 299 ISNKNVF 305 K + Sbjct: 296 KGAKELL 302 >gi|254458597|ref|ZP_05072022.1| porphobilinogen deaminase [Campylobacterales bacterium GD 1] gi|207084905|gb|EDZ62192.1| porphobilinogen deaminase [Campylobacterales bacterium GD 1] Length = 319 Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats. Identities = 97/305 (31%), Positives = 166/305 (54%), Gaps = 4/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 I TR S LAL A+ ++ + + P + + + + GD++ ++ L IGGKG Sbjct: 1 MNKLVIATRVSDLALWQAYHIKARVEASY--PEITVELNKIVSNGDKVLDKPLALIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 FT+E+E ++++G D AVHS KD+PT + +GL++ A R+D DVF+SH +L+DL Sbjct: 59 HFTKELEDEMLAGNADIAVHSLKDVPTYIPEGLELVAVTQRQDQSDVFLSHKHATLEDLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-- 180 +V+GT+SLRR+ LL+ R D+ V D RG + TRL KL+ + AI+LA+ G+ RL Sbjct: 119 QGAVVGTTSLRRRMQLLQQRPDLKVKDLRGNVNTRLRKLSEGQYDAIILAWIGLHRLDLL 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K+ + L+++ P GQ A+ IE N K +E+ + + +T+ ER F++++ Sbjct: 179 KDVPFTQKLSLDMMIPPMGQAALGIEIVCGNAKVREIAESLKDLNTFICTQIERDFISKI 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C + +A A + + F ++ DG + N D+ N+G + A+ + Sbjct: 239 GAGCSAPVACNAVIDDNIITFRVMLGFPDGTNIMQEKVVINVEDSDNLGSELAKKMIDNG 298 Query: 301 NKNVF 305 + Sbjct: 299 ALELL 303 >gi|125975012|ref|YP_001038922.1| hydroxymethylbilane synthase [Clostridium thermocellum ATCC 27405] gi|256005102|ref|ZP_05430072.1| porphobilinogen deaminase [Clostridium thermocellum DSM 2360] gi|281418570|ref|ZP_06249589.1| porphobilinogen deaminase [Clostridium thermocellum JW20] gi|167008812|sp|A3DIF0|HEM3_CLOTH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|125715237|gb|ABN53729.1| hydroxymethylbilane synthase [Clostridium thermocellum ATCC 27405] gi|255990953|gb|EEU01065.1| porphobilinogen deaminase [Clostridium thermocellum DSM 2360] gi|281407654|gb|EFB37913.1| porphobilinogen deaminase [Clostridium thermocellum JW20] gi|316939173|gb|ADU73207.1| porphobilinogen deaminase [Clostridium thermocellum DSM 1313] Length = 292 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 93/298 (31%), Positives = 154/298 (51%), Gaps = 8/298 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+G+R S LA+ A S+ + P I ++ + T GD+I ++T+ +IGGKGLF Sbjct: 2 KIRVGSRESKLAVRQAQIVIDSIKKYN--PDIEIELVTMKTTGDKILDKTIDKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+++ L+ G++D VHS KDMP + L I A RED RDV + ++ D + Sbjct: 60 VKELDRALLDGKVDITVHSFKDMPMDIDDRLPIVAVSKREDPRDVLVLPKGKNEID--FN 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IG SS RRK + + +V RG + TRL KL+ + AI LAYAG+KRL E+ Sbjct: 118 GPIGCSSSRRKIQIEKIYPGCTVEPIRGNVLTRLEKLDKGEYSAIALAYAGLKRLGLEER 177 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + + ++ P+ QG I ++ ++ + +D+WD ER+F+ L+G C Sbjct: 178 IWRVFSTDEIVPAACQGIIAVQA--RKDFDASILANFHDKDSWDVSVAERSFIKALNGGC 235 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 S A + +G + G + +GK +++++ G+R +G A + Sbjct: 236 SSPSAAYGVIQGEKIVLTGFYVDKNGK-IYKMTKTGDRNQGEALGYSLAMEML-KGAD 291 >gi|190683048|gb|ACE81820.1| hydroxymethylbilane synthetase [Oxyrrhis marina] Length = 395 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 128/301 (42%), Positives = 181/301 (60%), Gaps = 3/301 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLALA A + S + + I I +ST+GDRI +R L ++GGKGLFT Sbjct: 76 LRIGTRGSPLALAQARDVESRAREQLQQGG-EIDICVISTEGDRILDRALADVGGKGLFT 134 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+++ L+SGE+DC VHS KD+PT + G +I AYLPRED RDVF+S +L DL + Sbjct: 135 KELDRALLSGEVDCCVHSMKDVPTTVAPGTEIVAYLPREDTRDVFLSAKYATLADLPDGA 194 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GT+SLRR+A +L + ++ V +FRG ++TRL KL LAYAG+KRL Sbjct: 195 VVGTASLRRQAQILA-QKNVVVTNFRGNVQTRLRKLAAGTVDCTFLAYAGLKRLGMLAEA 253 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++L D P+ QGA+ I+ N+ + + ++HE T +V ERAFL LDGSC+ Sbjct: 254 TQVLEWSDMLPAIAQGAVGIQIRSNDAALRGTLSQLDHEPTRLAVETERAFLRALDGSCR 313 Query: 246 SAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + IAG A+ S L F G VL++DGK E + CD +G+ +R + + Sbjct: 314 TPIAGQAWIGPDSRLAFRGQVLSADGKQRFERVGDCLPCDGPELGKTLGDDLRREAGEEF 373 Query: 305 F 305 F Sbjct: 374 F 374 >gi|255322661|ref|ZP_05363805.1| porphobilinogen deaminase [Campylobacter showae RM3277] gi|255300222|gb|EET79495.1| porphobilinogen deaminase [Campylobacter showae RM3277] Length = 311 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 100/307 (32%), Positives = 156/307 (50%), Gaps = 7/307 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK +I TR S LA+ + R ++ + P + + + TKGD I + L +IGG Sbjct: 1 MEK--LKIATRKSVLAMWQSEHIRDKILSRY--PQIAVELTGMKTKGDVILDTPLAKIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E ++SGE AVHS KD+P +GL ++A RED+RD +S +D Sbjct: 57 KGLFTKELEDSMLSGETHIAVHSLKDVPVVFPEGLVLAAICSREDVRDAMLSEKYAKFED 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRRK LL R D+ +I RG ++TRL KL + AI+LA AG+ RL Sbjct: 117 LPEGARVGTTSLRRKMQLLAMRPDLEIISLRGNVQTRLRKLKEGEFDAIILAMAGVNRLN 176 Query: 181 KEKVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + I+ ++ P+ GQGA+ IE + + L++ + E ER F+A Sbjct: 177 LRSEVAHIVPFELDQMVPAMGQGALGIEAR-EDSEILNLIEFLKDEKAVIETTVERDFVA 235 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+G C+ I A G + +V DG + + + ++G + + Sbjct: 236 MLEGGCQVPIGVNANLNGDKIEIRAVVGLPDGSESIRENIVAQKSEWKSVGAELGRIFIG 295 Query: 299 ISNKNVF 305 K + Sbjct: 296 KGAKELL 302 >gi|325995520|gb|ADZ50925.1| Porphobilinogen deaminase [Helicobacter pylori 2018] Length = 306 Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats. Identities = 96/303 (31%), Positives = 152/303 (50%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IG+R S LAL A + L I + TKGD+I + L++IGGKGLF Sbjct: 3 KLVIGSRGSELALWQANHIKERLKKECS---MESEIRIVKTKGDKILDTPLSKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD +S L L Sbjct: 60 TKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTVLSVKFPDLMSLPKG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEK 183 + +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL + Sbjct: 120 AKVGTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ ++++ PS GQGA+ +E N+ L + +N E++ + ER F+ L+G Sbjct: 180 KYRKAFSVKEMIPSMGQGALGVEMLKNHKHFITL-QKLNDEESAFCCHLEREFIKGLNGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I A G + ++ +GK + G++ A ++ R+ + K Sbjct: 239 CQIPIGVHANLMGDEVKIQAVLGLPNGKEVITKEKQGDKNKAFDLVRELLEEFLQSGAKE 298 Query: 304 VFN 306 + Sbjct: 299 ILE 301 >gi|331084091|ref|ZP_08333198.1| porphobilinogen deaminase [Lachnospiraceae bacterium 6_1_63FAA] gi|330402453|gb|EGG82023.1| porphobilinogen deaminase [Lachnospiraceae bacterium 6_1_63FAA] Length = 296 Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats. Identities = 91/298 (30%), Positives = 149/298 (50%), Gaps = 6/298 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + IG+R S LA+ + R + + + + I+ + T GD+I +RTL +IGGKG Sbjct: 1 MRKVVIGSRESKLAVVQSEMVRDYIRENNA--DIQVEILTMKTTGDKILDRTLDKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E++K L+ + + +VHS KDMP ++ + L + A+ RED RDV + + D Sbjct: 59 LFVKELDKALMERKTELSVHSLKDMPMEVPEELPLIAFSKREDPRDVLVLPKGVTQLD-- 116 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 IG SSLRR L D+ RG ++TRL KL++ + +LLA AG+KRL E Sbjct: 117 TSKPIGCSSLRRILQLKEIFPDMECKSVRGNVQTRLKKLDDGEYSGLLLAAAGLKRLGLE 176 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E+ P+ GQG + I+ + +K E+ + ERAF+ L+G Sbjct: 177 DRIARYFEPEEMIPAAGQGILAIQGRKDVD--YSYLKGYGDENATYAALAERAFVRYLNG 234 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C S +A A + + G+ + + + + G+ A +G A+ ++ S Sbjct: 235 GCSSPVAAHARVEDGQIILRGLYYDENTGNYEKGLKKGSAEAAEELGISLAKELQERS 292 >gi|171057453|ref|YP_001789802.1| porphobilinogen deaminase [Leptothrix cholodnii SP-6] gi|170774898|gb|ACB33037.1| porphobilinogen deaminase [Leptothrix cholodnii SP-6] Length = 322 Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats. Identities = 101/312 (32%), Positives = 156/312 (50%), Gaps = 10/312 (3%) Query: 1 MEK--KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M +P I TR S LAL A R L H + ++ ++T+GD+I +R L+++ Sbjct: 7 MSTLPQPCIIATRESRLALWQAEHVRDLLQRRH---GAVVELLGMTTRGDQILDRALSKV 63 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLF +E+E L AVHS KD+P +L +G ++A L RED RD ++S+ + Sbjct: 64 GGKGLFVKELEVALEEDRAQLAVHSLKDVPMELPEGFVLAAVLEREDPRDAWVSNHYDDV 123 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L + +GTSSLRR L R D+ + RG ++TRL KL+ I+LA AG+KR Sbjct: 124 ASLPQGARVGTSSLRRIVQLKAVRPDLEIHALRGNLDTRLRKLDEGLYDGIVLAAAGLKR 183 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + I+ +++ P+ GQGA+ IE + +E + + TW +V+ ERA Sbjct: 184 LGLAQRIRSVIDPAVMLPAAGQGALGIEVRADASALREALAAMTDAPTWLAVHAERAVSR 243 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLAS-DGKI-FHEVSRNGNRCD---AINIGRDAA 293 L GSC +A FA +G+ L+ + D + S D A +G Sbjct: 244 ALGGSCSMPLAAFAQWQGAQLHLEARLGHPEDASVALIVASAEAAVTDTAGAEALGLAVV 303 Query: 294 QYIRFISNKNVF 305 +R + + Sbjct: 304 ARLRAGGGEALL 315 >gi|32267226|ref|NP_861258.1| porphobilinogen deaminase [Helicobacter hepaticus ATCC 51449] gi|39931411|sp|Q7VFE9|HEM3_HELHP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|32263279|gb|AAP78324.1| porphobilinogen deaminase [Helicobacter hepaticus ATCC 51449] Length = 321 Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats. Identities = 103/310 (33%), Positives = 162/310 (52%), Gaps = 10/310 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + IG+R S LAL A +S L I + T+GD+I + L +IGGKG Sbjct: 8 DRELVIGSRGSILALWQAEYIKSCLKAQC---GLQSRIQIIKTRGDKILDVPLAKIGGKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E+ L+S +ID AVHS KD+P + + L ++A RE D F+S +L L Sbjct: 65 LFTKELEEMLLSKDIDLAVHSLKDVPVEFVPELDLAAITQRESANDCFLSVNYPNLNALP 124 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-K 181 + +GT+SLRR + ++RSD+ + RG ++TRL KL+N AI+LA AG+ RLK Sbjct: 125 QGAKVGTTSLRRSMQIKKYRSDLDTLSLRGNVQTRLEKLHNGAFDAIILAQAGVNRLKIN 184 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ I+ ++ P+ GQGA+ IE ++ + + V+N + + V+ ERAF+ L+ Sbjct: 185 TQDVRYIVPLDFMIPAMGQGALGIEMRKDSIF-FDRIAVLNDKQSALCVSAERAFVRTLE 243 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-----GNRCDAINIGRDAAQYI 296 G C+ I +A + L IV DG + S + + N+G AQ Sbjct: 244 GGCQVPIGVYAQFSNNKLTLQAIVGLPDGSEVLQDSVEDSINIDDINASENLGIAFAQKF 303 Query: 297 RFISNKNVFN 306 K + Sbjct: 304 IDKGAKELLE 313 >gi|314936225|ref|ZP_07843572.1| hydroxymethylbilane synthase [Staphylococcus hominis subsp. hominis C80] gi|313654844|gb|EFS18589.1| hydroxymethylbilane synthase [Staphylococcus hominis subsp. hominis C80] Length = 310 Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 173/305 (56%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L + P I I + TKGDRI N+ L+++GGKG Sbjct: 1 MRKLVVGSRRSKLALTQSKQFIDKLKAI--DPSLEIEIKEIVTKGDRIVNQQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L + +ID A+HS KD+P+ + +GL + RE D +I+ L++L Sbjct: 59 LFVKEIQNELFNNDIDMAIHSLKDVPSIIPEGLTLGCIPDREIPFDAYIAKNHVPLEELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 +S++GTSSLRR A +L + + RG I+TRLNKL AI+LA AG+KR+ Sbjct: 119 KNSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLNKLETEDYDAIILAAAGLKRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + V+ L+ + P+ GQGA+ IE N+ + EL++ +++ + + V ER FLA +D Sbjct: 179 DDVVTTYLDKDTLLPAIGQGALGIECRRNDIELLELLQKVHNNEVANCVTAERTFLAAMD 238 Query: 242 GSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ I G+A Y + + F G+++ DGK +E + G D + +G ++ ++ Sbjct: 239 GSCQVPIGGYANYNNNNEIEFTGLIMTPDGKERYEHTEVGT--DPVKLGNRVSEILKEQG 296 Query: 301 NKNVF 305 + Sbjct: 297 AYEII 301 >gi|311744366|ref|ZP_07718168.1| hydroxymethylbilane synthase [Aeromicrobium marinum DSM 15272] gi|311312332|gb|EFQ82247.1| hydroxymethylbilane synthase [Aeromicrobium marinum DSM 15272] Length = 311 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 88/303 (29%), Positives = 152/303 (50%), Gaps = 8/303 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + + +V + ++ +ST+GDR + L E+GG+G+F Sbjct: 8 LRLGTRASVLARTQSGHVADRITEVS---GRAVELVTISTEGDR-STGPLAEMGGQGVFV 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + +G +D AVHS KD+PT L ++A PRED+RDV ++ +L +L + Sbjct: 64 AALREAVAAGHVDLAVHSLKDLPTAPDPRLALAAVPPREDVRDVVVARDGLTLGELPQGA 123 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGT S RR+A + + ++ RG ++TR+ K+ + + A++LA AG+ RL + Sbjct: 124 RIGTGSPRREAQINALGLGVEIVPIRGNVDTRIGKVASGEVDAVVLARAGLLRLGRADEA 183 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L+ P+PGQGA+ +E + + L+ ++ DT +V ER+ LA L+ C Sbjct: 184 TEVLDPIQVLPAPGQGALAVECRAGDDELIGLLAALDDADTRAAVTAERSLLAALEAGCS 243 Query: 246 SAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 + + A G L+ +V G +S G +A +G A + Sbjct: 244 APVGALAEVAWGDDGDELWIRAVVADPSGSPTIRLSATGLPAEAAAVGERLAAEMLADGA 303 Query: 302 KNV 304 + Sbjct: 304 DRI 306 >gi|168188066|ref|ZP_02622701.1| porphobilinogen deaminase [Clostridium botulinum C str. Eklund] gi|169294098|gb|EDS76231.1| porphobilinogen deaminase [Clostridium botulinum C str. Eklund] Length = 300 Score = 225 bits (572), Expect = 8e-57, Method: Composition-based stats. Identities = 104/299 (34%), Positives = 155/299 (51%), Gaps = 6/299 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +G+R S LAL + + + P + +STKGDRI + L +IG KGLF Sbjct: 2 KIVVGSRGSKLALTQTNWIINEIKQNY--PQIQFEVKIISTKGDRIQHIALDKIGDKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-AL 123 +EIE++LISGEID AVHS KDM T + + L+ S RED RDV I + + D + Sbjct: 60 VKEIEEQLISGEIDMAVHSMKDMSTDIPEELKFSYVPKREDYRDVLILNKKYNSIDELPM 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++ IGT S RR+ LL++R D++++ RG +ETR+NK+ H ++LA AGIKRL E+ Sbjct: 120 NARIGTGSKRRRYQLLQYRDDLNIVPIRGNVETRINKIETENLHGVVLAVAGIKRLNIEE 179 Query: 184 VIKE---ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + LN PSP QG + +E + ++++K I ++ ERAFL + Sbjct: 180 KLDYNIFYLNENIMLPSPAQGILALEIKKHREDLEKILKSIEDRNSTIQAIAERAFLKGV 239 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C I + G++ DG S G DA IG + A+ + Sbjct: 240 NGGCHVPIGAICNINKDNIEVTGLLGKEDGSKIIRKSLGGKIEDAEKIGYELAEIVLKE 298 >gi|228475193|ref|ZP_04059919.1| hydroxymethylbilane synthase [Staphylococcus hominis SK119] gi|228270804|gb|EEK12206.1| hydroxymethylbilane synthase [Staphylococcus hominis SK119] Length = 310 Score = 225 bits (572), Expect = 8e-57, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 173/305 (56%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L + P I I + TKGDRI N+ L+++GGKG Sbjct: 1 MRKLVVGSRRSKLALTQSKQFIDKLKAI--DPSLEIEIKEIVTKGDRIVNQQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L + +ID A+HS KD+P+ + +GL + RE D +I+ L++L Sbjct: 59 LFVKEIQNELFNNDIDMAIHSLKDVPSIIPEGLTLGCIPDREIPFDAYIAKNHVPLEELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 +S++GTSSLRR A +L + + RG I+TRLNKL AI+LA AG+KR+ Sbjct: 119 KNSIVGTSSLRRGAQILSKYPHLKIKWIRGNIDTRLNKLETEDYDAIILAAAGLKRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + V+ L+ + P+ GQGA+ IE N+ + EL++ +++ + + V ER FLA +D Sbjct: 179 DDVVTTYLDKDTLLPAIGQGALGIECRSNDIELLELLQKVHNNEVANCVTAERTFLASMD 238 Query: 242 GSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ I G+A Y + + F G+++ DGK +E + G D + +G ++ ++ Sbjct: 239 GSCQVPIGGYANYNNNNEIEFTGLIMTPDGKERYEHTEVGT--DPVKLGNRVSEILKEQG 296 Query: 301 NKNVF 305 + Sbjct: 297 AYEII 301 >gi|322695309|gb|EFY87119.1| porphobilinogen deaminase [Metarhizium acridum CQMa 102] Length = 327 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 106/319 (33%), Positives = 157/319 (49%), Gaps = 15/319 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +GTR SPLA+A A +SL V P + I ++T GDR N L GG Sbjct: 1 MAPSTITVGTRKSPLAMAQAELVVASLQSV--FPSSSFPIHGMTTTGDRDQNTALYNFGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT------ 114 KGL+T ++E+KL++ E+D VHS KDMPT L + A RED RDV + Sbjct: 59 KGLWTTQLEEKLVARELDIVVHSLKDMPTTLPSDCTLGAVTKREDPRDVLVLKKALRDAN 118 Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLA 172 ++L DL SVIGTSS+RR A L R + D RG I+TRL KL+ + AI+LA Sbjct: 119 GYKTLADLPDGSVIGTSSIRRIAQLARRYPALRFKDVRGNIQTRLKKLDEDPELSAIVLA 178 Query: 173 YAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 AG+ R+ + I + L++++ + GQGA+ +E + + +K I H DT + Sbjct: 179 AAGLLRMDLGEHISQYLDVDNGGILHAVGQGALGVECRAGDEQVLRALKEIEHRDTLLAC 238 Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV---SRNGNRCDAIN 287 ER+ + EL+G C I L V++ GK + + +A Sbjct: 239 LAERSLMRELEGGCSVPIGVETKWADGKLRLRATVVSVTGKEGVDADVLETVTSEEEATE 298 Query: 288 IGRDAAQYIRFISNKNVFN 306 +G+ AQ + + + Sbjct: 299 LGKRVAQDLVSRGADKILD 317 >gi|153813574|ref|ZP_01966242.1| hypothetical protein RUMOBE_03996 [Ruminococcus obeum ATCC 29174] gi|149830319|gb|EDM85411.1| hypothetical protein RUMOBE_03996 [Ruminococcus obeum ATCC 29174] Length = 312 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 98/297 (32%), Positives = 154/297 (51%), Gaps = 6/297 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K IG+R S LA+ + R + + H P ++ I+ + T GD+I +RTL ++GGKG Sbjct: 7 KNKVIIGSRESRLAVLQSEMVRDYIKEQH--PGLDVEILTMKTTGDKILDRTLDKVGGKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E++K L+ G +VHS KDMP ++ + L + A+ RED RDV + + D Sbjct: 65 LFVKELDKALLEGRTMLSVHSLKDMPMEVPEDLPLLAFSRREDPRDVLVLPEGAASLDPL 124 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +G SSLRR L D+ V RG ++TRL KL+ + ++LA AG+KRL E Sbjct: 125 --KPLGCSSLRRTLQLQTIYPDMKVKSIRGNLQTRLRKLDAGEYAGLILAAAGLKRLGLE 182 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 K I + ++ P+ GQG + ++ H E + ED W + ERAF+ LDG Sbjct: 183 KRIHRYFSADEILPAAGQGILAVQGHKGLK--YEYLSGYKDEDAWIAGTAERAFVRYLDG 240 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 C S +A F +G L+ G+ + + S G + +A +G A+ ++ Sbjct: 241 GCSSPVAAFGIVEGEELFLRGLYYREKDGRYFKDSIRGPKTEAARLGMCLAEQMKRE 297 >gi|148222555|ref|NP_001089699.1| hydroxymethylbilane synthase [Xenopus laevis] gi|76780331|gb|AAI06358.1| MGC130905 protein [Xenopus laevis] Length = 351 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 103/337 (30%), Positives = 146/337 (43%), Gaps = 35/337 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K R+GTR S LA L + + I+ +ST GD+I + L++IG K Sbjct: 7 TKHVIRVGTRKSQLARIQTDSVVEMLSK--RFSSTHFEIVAMSTTGDKILDTALSKIGEK 64 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H + L Sbjct: 65 SLFTKELENALEKNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPYDAVVFHPKRFGNTL 124 Query: 122 ---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177 SVIGTSSLRR A L + + D RG + TRL KL+ AI+LA AG++ Sbjct: 125 STLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRLRKLDEQEDFSAIILAAAGLR 184 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ E I +IL ++ + GQGA+ +E + +V + +T ERAF+ Sbjct: 185 RMGWENRIGQILTSDECLYAVGQGALAVEVRAKDQDILSMVSALQDPETVLRCVAERAFM 244 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV-----------SRNGNRCD-- 284 +L+G C +A K S LY G V + DG + G D Sbjct: 245 KKLEGGCSVPVAVSTVVKDSQLYLTGAVYSLDGSDSLKETMQSCINFPQQEVEGPNDDVQ 304 Query: 285 ----------------AINIGRDAAQYIRFISNKNVF 305 A +G A + K + Sbjct: 305 HVGITALGVSHQALESAECLGTGLADLLLSKGAKEIL 341 >gi|308184042|ref|YP_003928175.1| porphobilinogen deaminase [Helicobacter pylori SJM180] gi|308059962|gb|ADO01858.1| porphobilinogen deaminase [Helicobacter pylori SJM180] Length = 306 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 101/307 (32%), Positives = 156/307 (50%), Gaps = 7/307 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK IG+R S LAL A + L I + TKGD+I + L +IGG Sbjct: 1 MEK--LVIGSRGSELALWQANYIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L Sbjct: 56 KGLFTKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMS 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG++RL Sbjct: 116 LPKGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLQRLN 175 Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ ++E+ PS GQGA+ +E N K ++ +N E++ + ER F+ Sbjct: 176 VQGAKYRKAFSVEEMIPSMGQGALGVEML-KNHKHFATLQKLNDEESAFCCHLEREFIKG 234 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I A G + ++ +GK + G++ A ++ ++ + Sbjct: 235 LNGGCQIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEEFLQS 294 Query: 300 SNKNVFN 306 K + Sbjct: 295 GAKEILE 301 >gi|332764355|gb|EGJ94590.1| porphobilinogen deaminase [Shigella flexneri 2930-71] Length = 273 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 97/263 (36%), Positives = 144/263 (54%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 + T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P + +GL + Sbjct: 1 MVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICE 60 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 RED RD F+S+ SL L S++GTSSLRR+ L R D+ + RG + TRL+KL+ Sbjct: 61 REDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLD 120 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + +EL+ +N Sbjct: 121 NGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALN 180 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 H +T V ERA L+G C+ I +A ++ +V A DG R G Sbjct: 181 HHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLCALVGAPDGSQIIRGERRGAP 240 Query: 283 CDAINIGRDAAQYIRFISNKNVF 305 DA +G A+ + + + Sbjct: 241 QDAEQMGISLAEELLNNGAREIL 263 >gi|330817976|ref|YP_004361681.1| Porphobilinogen deaminase [Burkholderia gladioli BSR3] gi|327370369|gb|AEA61725.1| Porphobilinogen deaminase [Burkholderia gladioli BSR3] Length = 323 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 104/305 (34%), Positives = 160/305 (52%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LAL A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLALWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G +S + RED RD F+S+ SL DL Sbjct: 71 VKELENALADGRADLAVHSLKDVPMSLPEGFVLSTVMSREDPRDAFVSNDYASLDDLPTG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +++GTSSLRR+A+L D V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AIVGTSSLRREAMLRAHYLDFDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLGDR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ ++++E PP+ GQGA+ IE + + ++ T + ER L GSC Sbjct: 191 IRALIDVETSPPAAGQGALGIEIAASRTDVARWLAPLHDSATALAAEAERMVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 +A A G L G V + G V ++ +A+ +G+ + + Sbjct: 251 SVPLAAHAIWHGERLELTGRVSNTSGTRVLTVRQDAAVTTPDEALALGKQVSDELERQGA 310 Query: 302 KNVFN 306 + Sbjct: 311 FEIIE 315 >gi|296532729|ref|ZP_06895413.1| hydroxymethylbilane synthase [Roseomonas cervicalis ATCC 49957] gi|296266947|gb|EFH12888.1| hydroxymethylbilane synthase [Roseomonas cervicalis ATCC 49957] Length = 368 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 110/311 (35%), Positives = 157/311 (50%), Gaps = 10/311 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKI--PPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 P R+GTR SPLAL ++ + ++T GDRI ++ L +IGGKG Sbjct: 56 PLRVGTRGSPLALWQTRTFLELVLHFCPVLRNAKAFEEHVIATSGDRIQDKRLADIGGKG 115 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL- 121 LF +EI + L+ G ID AVHS KD+ T+L G+ ++ L RED RD + + D Sbjct: 116 LFAKEIHEALLDGRIDFAVHSLKDLETELPPGIVLACTLRREDARDTLVLGPGAADADPA 175 Query: 122 ------ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 + IGT+SLRR+A LL R D+ V RG + +RL KL + LLA AG Sbjct: 176 DPFSAIPAGARIGTASLRRQAQLLHARPDLKVEMIRGNVGSRLAKLAGGECDGTLLALAG 235 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 +KRL E +L+ E P+ GQG + + + + EL+ I ERA Sbjct: 236 LKRLGLESHASVVLDAEAMVPAAGQGIVGVTVRAADTELHELLSGIEDRTARAVSRAERA 295 Query: 236 FLAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 LA LDGSC++ I G A G L+ G+V DG + S +G +A IGR+ + Sbjct: 296 LLAALDGSCRTPIGGHARLLPGGELHLTGLVARPDGSFLLKRSLHGAAGEAERIGRELGE 355 Query: 295 YIRFISNKNVF 305 +R S ++F Sbjct: 356 SLRADSPADIF 366 >gi|315925350|ref|ZP_07921561.1| hydroxymethylbilane synthase [Pseudoramibacter alactolyticus ATCC 23263] gi|315621251|gb|EFV01221.1| hydroxymethylbilane synthase [Pseudoramibacter alactolyticus ATCC 23263] Length = 309 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 100/300 (33%), Positives = 145/300 (48%), Gaps = 6/300 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +G+R S LA+ L H P + ++TKGDR ++ L IG KG Sbjct: 1 MKKIVVGSRGSKLAVTQTNWLIERLAAAH--PDIAFELKIITTKGDRNQHQALDAIGDKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL- 121 LFT E+E +L+SGEI AVHS KDMP+ L +GL ++ RED DV ++ + D Sbjct: 59 LFTAELEAELLSGEIQMAVHSMKDMPSALPEGLCLTVPPMREDPADVLVTPHGAASLDDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +VIG+ S RR L R D+ + RG I+TR+ KL + I+LA AG++RL Sbjct: 119 PEGAVIGSGSKRRVFQLKALRPDLQTVGIRGNIDTRIRKLFDEHLDGIVLAAAGMRRLNV 178 Query: 182 EKVIKEILNI---EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L F P+P QG + +E +N + + L+ I+ E + ER+FL Sbjct: 179 YDAADYHLVPLLPPAFVPAPAQGILAVEIREDNAEVKALMAAISDETARVQMAAERSFLT 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 LDG C I + G + YG+ G + S G DA +G A+ +R Sbjct: 239 ALDGDCHLPIGAYCEAAGDAITLYGLYGDEAGTRLVKGSAAGRAADAERLGAQLAEQLRK 298 >gi|239637532|ref|ZP_04678504.1| porphobilinogen deaminase [Staphylococcus warneri L37603] gi|239596750|gb|EEQ79275.1| porphobilinogen deaminase [Staphylococcus warneri L37603] Length = 308 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 103/305 (33%), Positives = 169/305 (55%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L V P +I I + TKGDRI ++ L+++GGKG Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDKLKQVR--PDLDIEIKEIVTKGDRIVDKQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L +ID A+HS KD+P+ + +GL + RE D +IS L++L Sbjct: 59 LFVKEIQNELFEKQIDMAIHSLKDVPSVIPEGLTLGCIPDREVPFDAYISKNHTPLRELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S+IGTSSLRR A +L + + RG I+TRL KL AI+LA AG++R+ Sbjct: 119 EGSIIGTSSLRRGAQILSKYPHLEIKWIRGNIDTRLQKLETEDYDAIILAAAGLRRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ L+ + P+ GQGA+ IE ++ + EL+K ++++D V ER FLAE+D Sbjct: 179 DDIVTTYLDKDILLPAIGQGALGIECRSDDEELLELLKEVHNKDVEKCVTAERTFLAEMD 238 Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ I G+A + F G+++ DG +E + G +G++ ++ ++ Sbjct: 239 GSCQVPIGGYATINSQQQIEFTGLIMTPDGTERYEHTAIG--ESPTELGKEVSRVLKEQG 296 Query: 301 NKNVF 305 + Sbjct: 297 AYEII 301 >gi|150865873|ref|XP_001385264.2| hypothetical protein PICST_47071 [Scheffersomyces stipitis CBS 6054] gi|149387129|gb|ABN67235.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 372 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 94/319 (29%), Positives = 150/319 (47%), Gaps = 17/319 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +IG R S LA+ + + + + P N I+ LST GD+I N+ L GGK Sbjct: 23 TNHIQIGGRKSTLAVVQSEIVKKEIEEA--FPHINCSILALSTLGDKIQNKPLYSFGGKS 80 Query: 63 LFTEEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---T 114 L+T+E+E L+ ++D VHS KDMPT L ++ L RED RD + Sbjct: 81 LWTKELEILLLDSIDEFPQLDLIVHSLKDMPTNLPDEFELGCILKREDPRDALVMRAGSP 140 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLA 172 ++L DL SV+GTSS+RR + L++ + RG ++TRL+KL++ I+LA Sbjct: 141 YKTLDDLPAGSVVGTSSIRRSSQLVKNYPHLKFDSVRGNLQTRLSKLDDDSQPFECIILA 200 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 AG+ R+ + + LN + GQGA+ +E N+ K + ++ I+H T Sbjct: 201 SAGLIRVGLGHRVTDYLNAPHMYYAVGQGALGVEIRKNDTKMKNILAKISHIPTSLCCYA 260 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNRC---DAIN 287 ER+ + L+G C I + L F I+++ DG F E A Sbjct: 261 ERSLMRYLEGGCSVPIGVHTNYDEDSKVLKFEAIIVSPDGTQFVEDELEAQVETLQQAEA 320 Query: 288 IGRDAAQYIRFISNKNVFN 306 +G + K++ + Sbjct: 321 LGIQLGDRLIAKGAKDILD 339 >gi|326792716|ref|YP_004310537.1| porphobilinogen deaminase [Clostridium lentocellum DSM 5427] gi|326543480|gb|ADZ85339.1| porphobilinogen deaminase [Clostridium lentocellum DSM 5427] Length = 301 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 111/304 (36%), Positives = 157/304 (51%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IGTR S LAL L + P + + TKGD I ++ L +IG KG+F Sbjct: 2 KVVIGTRGSRLALTQTKWVIDELEKHY--PELACEMKIIKTKGDLIQDKPLDKIGDKGIF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLAL 123 T+EIE +L+ G ID AVHS KDMP++L GL+ + L RED RDV I S++DL + Sbjct: 60 TKEIEAELLKGNIDMAVHSMKDMPSELPLGLRFTRTLKREDARDVLILKEGYASIEDLPI 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + I T S RRK LL +RSD++++ RG ++TRL KL K I+LA AG+ RL Sbjct: 120 GATIATGSKRRKYQLLAYRSDLNIVPIRGNVDTRLCKLEEEKLEGIVLAAAGLHRLGLAD 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I L +E P+P QGA+ IE + KA +LVKV+ + V ERAF+ ++G Sbjct: 180 KITCYLPMEIMLPAPAQGALAIEIRQEDTKAYDLVKVLEDPVSSIQVEAERAFMDAINGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C I + G+ L G++ GK +G + A +R KN Sbjct: 240 CHMPIGAYCEVIGTKLRMRGLLGDELGKKLVIKELCAPIGSEKQLGEELASVLRKEFEKN 299 Query: 304 VFNF 307 ++ Sbjct: 300 --DW 301 >gi|240141705|ref|YP_002966185.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Methylobacterium extorquens AM1] gi|240011682|gb|ACS42908.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Methylobacterium extorquens AM1] Length = 294 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 113/292 (38%), Positives = 165/292 (56%), Gaps = 3/292 (1%) Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74 +ALA R ++ + P I+ +ST DR+ +R L+EIGGKGLFT+E+E+ L + Sbjct: 1 MALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIGGKGLFTKELEQALFA 58 Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDLALHSVIGTSSLR 133 EID AVHS KD+ T L GL I+ L R+D RD F+S + A L DL + +GTSSLR Sbjct: 59 DEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADLPPGARVGTSSLR 118 Query: 134 RKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIED 193 R A +L R D++++ RG TR+ KL + A LLA AG++RL V + +L++E+ Sbjct: 119 RGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGMADVARSVLSVEE 178 Query: 194 FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY 253 P+ QGA+ IE + + L+ + T +++ ER LAELDGSC++ IA A Sbjct: 179 MLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELDGSCRTPIAALAQ 238 Query: 254 CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 KG + G++ DG V R G DA IGR+A ++ + F Sbjct: 239 VKGDRISLDGLLFLPDGSRHWAVHREGLAADADAIGREAGAELKRAAGDVYF 290 >gi|317008888|gb|ADU79468.1| porphobilinogen deaminase [Helicobacter pylori India7] Length = 306 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 97/303 (32%), Positives = 153/303 (50%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IG+R S LAL A + L I + TKGD+I + L +IGGKGLF Sbjct: 3 KLVIGSRGSELALWQANHIQERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L Sbjct: 60 TKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183 + +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 120 AKVGTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ ++E+ PS GQGA+ +E N+ L + +N E++ + ER F+ L+G Sbjct: 180 KYRKAFSVEEMIPSMGQGALGVEMLKNHKHFITL-QKLNDEESAFCCHLEREFIKGLNGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I A G + ++ +GK + G++ A ++ ++ + K Sbjct: 239 CQIPIGVHASLMGDRVKIQAVLGLPNGKEVITKEKRGDKTKAFDLIQELLEEFLQSGAKE 298 Query: 304 VFN 306 + Sbjct: 299 ILE 301 >gi|313905566|ref|ZP_07838929.1| porphobilinogen deaminase [Eubacterium cellulosolvens 6] gi|313469629|gb|EFR64968.1| porphobilinogen deaminase [Eubacterium cellulosolvens 6] Length = 299 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 92/307 (29%), Positives = 147/307 (47%), Gaps = 11/307 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 ME IGTR S LAL L + + P ++ ++ ++T GDRI +R L +IGG Sbjct: 1 MENNRIIIGTRESRLALVQTGMVADFLREKY--PERSVELLKMTTTGDRILDRRLDQIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+++ L +GE D VHS KD+P +L + L + RED RDV + + D Sbjct: 59 KGLFVKELDRALAAGECDLCVHSMKDLPMELPEELPLLGCSRREDPRDVLVLPAGRKEPD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 IGTSS RR + + D RG ++TRL KL+ ++LA AG+KR+ Sbjct: 119 --PSLPIGTSSRRRILQVQKLYPDAKFESVRGNLQTRLKKLDEGLYGGLILAAAGLKRMG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I + E+ P+ GQG + I+ + + T + ERAF+ L Sbjct: 177 LENRISRYFSTEEVIPAAGQGVLAIQGRADTYDFD--LDGFIDPGTMLATLAERAFVRRL 234 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIR 297 +G C +A + G +L G+ + ++ R+ + +A +GR A+ + Sbjct: 235 NGGCSLPVAAYGEFDGESLALRGLYYDEEKRVSRTEERSAIVRTKEEAEALGRGLAEQLI 294 Query: 298 FISNKNV 304 + + Sbjct: 295 P--GREI 299 >gi|330684284|gb|EGG96022.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU121] Length = 298 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 101/301 (33%), Positives = 168/301 (55%), Gaps = 6/301 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + + L V P +I I + TKGDRI ++ L+++GGKG Sbjct: 1 MRKLVVGSRRSKLALTQSQQFIDKLKQVR--PELDIEIKEIVTKGDRIVDKQLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EI+ +L +ID A+HS KD+P+ + +GL + RE D +IS L++L Sbjct: 59 LFVKEIQNELFEKQIDMAIHSLKDVPSVIPEGLTLGCIPDREVPFDAYISKNHTPLRELP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 S+IGTSSLRR A +L + + RG I+TRL KL AI+LA AG++R+ Sbjct: 119 EGSIIGTSSLRRGAQILSKYPHLEIKWIRGNIDTRLQKLETEDYDAIILAAAGLRRMGWS 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ L+ + P+ GQGA+ IE ++ + +L++ ++++D V ER FLAE+D Sbjct: 179 DDIVTTYLDKDVLLPAIGQGALGIECRSDDKELLDLLQEVHNKDVEKCVTAERTFLAEMD 238 Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 GSC+ I G+A + F G+++ DG +E + G +G++ ++ ++ Sbjct: 239 GSCQVPIGGYATINSQQQIEFTGLIMTPDGTERYEHTAIG--ESPTELGKEVSRVLKEQG 296 Query: 301 N 301 Sbjct: 297 A 297 >gi|54020779|ref|NP_001005635.1| hydroxymethylbilane synthase [Xenopus (Silurana) tropicalis] gi|49250823|gb|AAH74624.1| hydroxymethylbilane synthase [Xenopus (Silurana) tropicalis] Length = 351 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 103/337 (30%), Positives = 146/337 (43%), Gaps = 35/337 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K R+GTR S LA L + P + I+ +ST GD+I + L++IG K Sbjct: 7 NKHVIRVGTRKSQLARIQTDSVVEMLSK--RFPSTHFDIVAMSTTGDKILDTALSKIGEK 64 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H + L Sbjct: 65 SLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPYDAVVFHPKRYGNTL 124 Query: 122 ---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177 SVIGTSSLRR A L + + D RG + TR+ KL+ AI+LA AG++ Sbjct: 125 STLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRMKKLDEKEDFSAIILAAAGLR 184 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + I +IL ++ + GQGA+ IE + +V + +T ERAF+ Sbjct: 185 RMGWKNRIGQILTSDECLYAVGQGALAIEVRAKDQDILSMVSALQDPETVLRCIAERAFM 244 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV-----------SRNGNRCD-- 284 L+G C +A K S LY G V + DG + G D Sbjct: 245 KRLEGGCSVPVAVNTVVKDSQLYLTGAVYSLDGSDSLKETMQSCINFPQQEVEGPNDDVQ 304 Query: 285 ----------------AINIGRDAAQYIRFISNKNVF 305 A +G A + K + Sbjct: 305 HVGITALGVSHQALESAECLGTGLADLLLSKGAKEIL 341 >gi|126348046|emb|CAJ89766.1| putative porphobilinogen deaminase [Streptomyces ambofaciens ATCC 23877] Length = 311 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 101/304 (33%), Positives = 148/304 (48%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT Sbjct: 7 IRIVSRDSPMALAQVERVRAGLAALH--PGVRTEVVPVKTTGDKWLG-DLSQVEGKGAFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L+S E D AVH KD+P L G +A+L R+D+RD I +L +L Sbjct: 64 KEVDAALLSDEADLAVHCVKDVPADRPLPAGTVFAAFLERDDVRDALIHPDGLTLDELPA 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSS+RR A L + + FRG RL KL +A A+LLA AG++R+ + Sbjct: 124 GTRVGTSSVRRVAQLAATHPHLRCVPFRGNANRRLAKLAAGEADALLLAVAGLERIGRRD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI E+L+ E P G G + ++ + E V + H T + ER FL L G Sbjct: 184 VISEVLSPETMMPPIGAGILALQCREGDTDLIEAVSGLGHPATHREASAERMFLHVLQGH 243 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG+A G L V DGK R D +G A + + Sbjct: 244 CNSPIAGYARVDRGGELSLRACVFTPDGKTRLNAHEWAGRLDPATLGTSVAVALLRQGAR 303 Query: 303 NVFN 306 + + Sbjct: 304 EIID 307 >gi|208434184|ref|YP_002265850.1| porphobilinogen deaminase [Helicobacter pylori G27] gi|226706288|sp|B5ZA04|HEM3_HELPG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|208432113|gb|ACI26984.1| porphobilinogen deaminase [Helicobacter pylori G27] Length = 306 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 98/302 (32%), Positives = 153/302 (50%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECF---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-V 184 +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E N K ++ +N E++ + ER F+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KNHKHFATLQKLNDEESAFCCHLEREFVKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A ++ +D + K + Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVITKEKRGDKTKAFDLVQDLLEEFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|148544908|ref|YP_001272278.1| porphobilinogen deaminase [Lactobacillus reuteri DSM 20016] gi|184154245|ref|YP_001842586.1| porphobilinogen deaminase [Lactobacillus reuteri JCM 1112] gi|227364048|ref|ZP_03848148.1| hydroxymethylbilane synthase [Lactobacillus reuteri MM2-3] gi|325683253|ref|ZP_08162769.1| hydroxymethylbilane synthase [Lactobacillus reuteri MM4-1A] gi|167008814|sp|A5VM67|HEM3_LACRD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|229836109|sp|B2G9H4|HEM3_LACRJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|60172703|gb|AAX14537.1| HemC [Lactobacillus reuteri] gi|148531942|gb|ABQ83941.1| hydroxymethylbilane synthase [Lactobacillus reuteri DSM 20016] gi|183225589|dbj|BAG26106.1| porphobilinogen deaminase HemC [Lactobacillus reuteri JCM 1112] gi|227070970|gb|EEI09293.1| hydroxymethylbilane synthase [Lactobacillus reuteri MM2-3] gi|324977603|gb|EGC14554.1| hydroxymethylbilane synthase [Lactobacillus reuteri MM4-1A] Length = 305 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 102/301 (33%), Positives = 161/301 (53%), Gaps = 7/301 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +G+R S LA+A +SL + P I + T+GDR + +L +IGG Sbjct: 1 MTNKVI-VGSRKSKLAMAQTELVIASLEKI--FPDIKFEIKNVITEGDRNRHVSLAKIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLK 119 KG+F +EIE +L G ID AVHS KD+ L + L + A+ R D +S SL Sbjct: 58 KGVFVKEIEDELKDGTIDFAVHSLKDVMPILPEELVLGAFPKRVSPYDCLVSRKNLSSLN 117 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL + IGT+SLRR+ LL R D+ +I RG I+TRL K++ I+LA AG+ RL Sbjct: 118 DLPKGARIGTNSLRRQGQLLSIRPDLKIIPIRGNIDTRLRKIDTEALDGIILAEAGLTRL 177 Query: 180 KKEKVIKEILNIEDF-PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + +L+++++ P+ GQG + IE N+ + ++++ IN E++ V ER F+ Sbjct: 178 NIDLSSYHVLDLQNYIMPAVGQGCLAIECRKNDTRIRKMLDQINDEESAYCVQVEREFMR 237 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 EL GSC I G AY K + F G++ + +G+ + ++ + +G+ A + Sbjct: 238 ELGGSCNFPIGGHAYAKNGQILFDGLIASPNGEHVIKETKI--PANNSGVGKKVADQLLA 295 Query: 299 I 299 Sbjct: 296 K 296 >gi|310826391|ref|YP_003958748.1| uroporphyrinogen III synthase/methyltransferase [Eubacterium limosum KIST612] gi|308738125|gb|ADO35785.1| uroporphyrinogen III synthase/methyltransferase [Eubacterium limosum KIST612] Length = 804 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 98/304 (32%), Positives = 155/304 (50%), Gaps = 6/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +G+R S LA+ L + P + + + TKGD+I ++ L +IG KG+F Sbjct: 2 KIIVGSRGSKLAVVQTNWLLEELRKAN--PEVDFELKIIKTKGDKIQHKALDKIGDKGIF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLAL 123 T+E+E L+SGEID AVHS KDMP+ L GL +S RED RDV + H ++++L Sbjct: 60 TKELEDALLSGEIDMAVHSMKDMPSALPDGLTLSVPPMREDPRDVLLTPHKISAIQELPE 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 ++VIGT S RR L R D V+ RG I+TR+ K+ I+LA AG+KR+ + Sbjct: 120 NAVIGTGSKRRIYQLKNIRKDFEVVGIRGNIDTRIRKMKEQGLDGIILAAAGLKRIGVYE 179 Query: 184 VIKEIL---NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + F +P QG + +E +N + L++ +++ T + ER FL L Sbjct: 180 SGDYTCLPLDPCQFVSAPAQGILAVEIREDNETVKALMESVSNPVTKAQMTAERQFLISL 239 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +GSC I + +G L YG+ DG I ++ G + +G A+ ++ + Sbjct: 240 NGSCHIPIGAYCNVEGEKLTLYGLFGNEDGTILYKGQTEGAMGEEAKMGDRLAKELKEMV 299 Query: 301 NKNV 304 + Sbjct: 300 EAKI 303 >gi|296274257|ref|YP_003656888.1| porphobilinogen deaminase [Arcobacter nitrofigilis DSM 7299] gi|296098431|gb|ADG94381.1| porphobilinogen deaminase [Arcobacter nitrofigilis DSM 7299] Length = 312 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 105/307 (34%), Positives = 159/307 (51%), Gaps = 6/307 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR S LAL + ++ L+ + P I + STK D+I + L +IGGKG Sbjct: 1 MKKIVIATRKSKLALWQSEYIKAELLKHY--PDMVIELKTFSTKADKILDVPLAKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E L + E D AVHS KD+P + +G ++A R D RD F+S S+ DL Sbjct: 59 LFTKELEIALENKEADIAVHSLKDVPVEFEEGFVLAALTKRFDPRDAFLSEKYASITDLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++IGT+SLRR+ L R DI + D RG I TR+ KL + AI+LA G+++L+ E Sbjct: 119 NGAIIGTTSLRRRMELKLLRPDIELKDLRGNINTRIAKLKAGEYDAIILAATGVQKLQIE 178 Query: 183 KVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +K I++ PS GQ + IET +NP+ E++ V++ ++ ER+F+ L Sbjct: 179 DEVKYFTPISIDEMIPSMGQATLGIETL-DNPELVEILSVLHDKNAEIESTIERSFVHTL 237 Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ I A +++ IV DG + + N D G+ AQ Sbjct: 238 EGGCQVPIGVKATILDENSVDVRAIVGMPDGSEYVQEDIKINIDDYKTAGQALAQTFIDQ 297 Query: 300 SNKNVFN 306 K + Sbjct: 298 GAKELLE 304 >gi|289423443|ref|ZP_06425247.1| hydroxymethylbilane synthase [Peptostreptococcus anaerobius 653-L] gi|289156201|gb|EFD04862.1| hydroxymethylbilane synthase [Peptostreptococcus anaerobius 653-L] Length = 307 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 104/302 (34%), Positives = 154/302 (50%), Gaps = 9/302 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +GTR S LA+ ++ ++ I +STKGDRI +++L +IG KG+F Sbjct: 2 KLIVGTRGSKLAVTQTKIVVDAIKS--NFENIDVDIKIISTKGDRILDKSLDKIGDKGIF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA-- 122 T+EIE++LI GEID A+HS KDMP++L +GL ++ + RED RD+ I ++ D Sbjct: 60 TQEIERQLIEGEIDFAIHSLKDMPSELGEGLVLTKTIQREDPRDLLILNSKFKKIDDPIK 119 Query: 123 -----LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 IGT S RR A LL ++ + RG I+TRL K+ AI+LA AG+ Sbjct: 120 WLKENDGMRIGTGSKRRSAQLLNINPNLKIDLIRGNIDTRLEKMEKESYDAIVLAAAGVN 179 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RLK + + +L+ P+ GQGA+ IE N + + + I+ + V ER +L Sbjct: 180 RLKMDWINSYVLDEGSMIPAVGQGALAIEIKEGNQELVNIFEAISDDIANVCVEAERTYL 239 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 A ++G C + A L GI + D K+ S G DA IGR+ A I Sbjct: 240 ATINGGCHMPVGALAQVNEGKLCLKGIYGSEDCKLIISSSLEGPLEDAQRIGRELADKIL 299 Query: 298 FI 299 Sbjct: 300 RE 301 >gi|157164515|ref|YP_001466695.1| porphobilinogen deaminase [Campylobacter concisus 13826] gi|259647804|sp|A7ZD37|HEM3_CAMC1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|112800491|gb|EAT97835.1| porphobilinogen deaminase [Campylobacter concisus 13826] Length = 309 Score = 223 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 103/305 (33%), Positives = 156/305 (51%), Gaps = 5/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +I TR S LAL + ++ + HK +V+ + TKGD I + L +IGGKG Sbjct: 1 MKEIKIATRKSILALWQSEHIKARIEAQHK--GMKVVLEGMKTKGDVILDTPLAKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E ++ GE D AVHS KD+P +GL+++A RED RD IS DL Sbjct: 59 LFTKELEDSMLKGETDIAVHSLKDVPVVFPEGLRLAAICSREDTRDAMISEKFAKFSDLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI--KRLK 180 + +GT+SLRRK LL R D+ +I RG ++TRL KL + AI+LA AGI +K Sbjct: 119 HGAKVGTTSLRRKMQLLIMRPDLEIISLRGNVQTRLRKLKEGEFDAIILAMAGINRLNIK 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E ++ P+ GQGA+ IE + + + +N E+ ER F++ L Sbjct: 179 AEVAHIYTFGFDEMIPAMGQGALGIEAR-DEKQILDETSFLNDENAVIETTIERDFVSVL 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I A KG + IV DG + + S ++ ++G++ A Sbjct: 238 EGGCQVPIGISARLKGDEISIDAIVGLPDGSEYIKDSLKTSKDKFQSVGKELAHKFIEKG 297 Query: 301 NKNVF 305 + + Sbjct: 298 ARELL 302 >gi|160897675|ref|YP_001563257.1| porphobilinogen deaminase [Delftia acidovorans SPH-1] gi|160363259|gb|ABX34872.1| porphobilinogen deaminase [Delftia acidovorans SPH-1] Length = 312 Score = 223 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 103/301 (34%), Positives = 152/301 (50%), Gaps = 13/301 (4%) Query: 1 MEKKP-----FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL 55 M KP I TR S LAL A ++ L H + ++ ++TKGD+I +RTL Sbjct: 1 MNTKPLLPHSIVIATRESQLALWQAEHVQALLRAR----GHEVELLGMTTKGDQILDRTL 56 Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115 +++GGKGLF +E+E L G AVHS KD+P +L +G ++ + RED RD F+S+ Sbjct: 57 SKVGGKGLFVKELEVALEEGRAHIAVHSLKDVPMELPEGFVLACVMEREDPRDAFVSNRY 116 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 +L +L +V+GTSSLRR+ALL R D+ + RG + TRL KL+ AI+LA AG Sbjct: 117 ATLAELPQGAVVGTSSLRRQALLQALRPDLKIEPLRGNVNTRLRKLDEGHYDAIVLAAAG 176 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + RL I+ P+ GQGA+ IE + + + + H+ TW +V ERA Sbjct: 177 LMRLGLADRIRARFEPTGMLPAAGQGALGIEVRADRQDLIDALAPLAHQTTWLTVTAERA 236 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK-IFHEVSRNGNRCD---AINIGRD 291 + GSC +A G L G+ +V + D A +G+ Sbjct: 237 VSRCMGGSCSMPLAAHGTFDGRQLRLDAAWGDPQGRLPLVQVHADATVTDFASADALGQH 296 Query: 292 A 292 Sbjct: 297 V 297 >gi|254564213|ref|YP_003071308.1| Porphobilinogen deaminase [Methylobacterium extorquens DM4] gi|254271491|emb|CAX27506.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Methylobacterium extorquens DM4] Length = 294 Score = 223 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 113/292 (38%), Positives = 164/292 (56%), Gaps = 3/292 (1%) Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74 +ALA R ++ + P I+ +ST DR+ +R L+EIGGKGLFT+E+E+ L + Sbjct: 1 MALAQTGMVRDRIVAAN--PGLETEIVVVSTVADRVLDRPLSEIGGKGLFTKELEQALFA 58 Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDLALHSVIGTSSLR 133 EID AVHS KD+ T L GL I+ L R+D RD F+S + A L DL + +GTSSLR Sbjct: 59 DEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADLPPGARVGTSSLR 118 Query: 134 RKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIED 193 R A +L R D++++ RG TR+ KL + A LLA AG++RL V + +L++E+ Sbjct: 119 RGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGMANVARSVLSVEE 178 Query: 194 FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY 253 P+ QGA+ IE + + L+ + T +++ ER LAELDGSC++ IA A Sbjct: 179 MLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELDGSCRTPIAALAQ 238 Query: 254 CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 G + G++ DG V R G DA IGRDA ++ + F Sbjct: 239 VSGDRISLDGLLFLPDGSRHWAVHREGLAADADAIGRDAGAELKRAAGDVYF 290 >gi|117927446|ref|YP_871997.1| hydroxymethylbilane synthase [Acidothermus cellulolyticus 11B] gi|254800230|sp|A0LRF1|HEM3_ACIC1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|117647909|gb|ABK52011.1| hydroxymethylbilane synthase [Acidothermus cellulolyticus 11B] Length = 331 Score = 223 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 89/304 (29%), Positives = 140/304 (46%), Gaps = 8/304 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA A E +L + I+ + + GDR + L E G G+F Sbjct: 10 LRLGTRRSTLARAQTEEIAGALRAA----GCRVEIVGIQSTGDRHADVPLHEFAGSGVFV 65 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E+ L+ GE+D VHS KD+PT + L I+A R D RD ++ L +L + Sbjct: 66 AELRAALLRGEVDVVVHSMKDLPTAEIPELAIAAIPRRADPRDALVTGAGCRLAELPTGA 125 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GT S RR A L R D+ + RG ++TRL KL+ A+++A AG+ RL + + Sbjct: 126 IVGTGSPRRAAQLRLLRPDLEIRPIRGNLDTRLGKLHAGGYAALIVAAAGLARLHRSEEA 185 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNP----KAQELVKVINHEDTWDSVNCERAFLAELD 241 E + P+PGQGA+ +E + + ++ ++ T +V ERA LA + Sbjct: 186 AEFFDPTVMLPAPGQGALAVECRRADIADGGRLAGILAGLDDPATRAAVTAERALLAAVG 245 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C + + TL +V+ G S G DA ++GR A + Sbjct: 246 AGCSAPVGALGVVTADTLQLDAVVVDPSGTTAFRRSLTGTPDDASDLGRRLAADLIRAGA 305 Query: 302 KNVF 305 + Sbjct: 306 DQLL 309 >gi|238916686|ref|YP_002930203.1| hydroxymethylbilane synthase [Eubacterium eligens ATCC 27750] gi|259647796|sp|C4Z552|HEM3_EUBE2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238872046|gb|ACR71756.1| hydroxymethylbilane synthase [Eubacterium eligens ATCC 27750] Length = 295 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 101/293 (34%), Positives = 149/293 (50%), Gaps = 7/293 (2%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 RIGTR S LAL + + + + + P ++ + T GD++T++ L IG KG F + Sbjct: 4 RIGTRGSKLALVQSEYVKRRMEEAY--PEDTFELVIIKTTGDKVTDKPLAAIGTKGFFVK 61 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE+ L+SG ID AVHS KDMP + GL + RED RDV I TA S +L +V Sbjct: 62 EIEEALLSGSIDMAVHSMKDMPAECAAGLTFAKAWKREDCRDVLILKTAGSFSELPSGAV 121 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGIKRLKKEKV 184 IGT SLRR L R DI RG ++TR+NKL ++ I+LA AG+ RL + Sbjct: 122 IGTGSLRRACQLAMLRPDIQFTAIRGNVDTRINKLMDDSYGLDGIVLAAAGLNRLGRSSE 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ E P+P QG + IET N + + + ++ +++ ER FL G C Sbjct: 182 ITEYLDPEVVIPAPAQGVLAIETAEVNTELLDKINALSDDNSDREAVAERTFLRLTGGGC 241 Query: 245 KSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + K + L + D + G D+ +G +AA+ + Sbjct: 242 HAPVGAHCVTKDNGDLRMVVLFGNDDCSRILRIEVTGT--DSEAVGHEAARML 292 >gi|313205044|ref|YP_004043701.1| porphobilinogen deaminase [Paludibacter propionicigenes WB4] gi|312444360|gb|ADQ80716.1| porphobilinogen deaminase [Paludibacter propionicigenes WB4] Length = 306 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 96/308 (31%), Positives = 155/308 (50%), Gaps = 6/308 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M KK F + TR S LA +T L K P I+ +ST GD +T++ LT GG Sbjct: 1 MSKK-FVVATRPSLLAYTQTQQTVDLLRV--KNPDCEFEIVKISTHGDTVTDKPLTAFGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F +E+E L G+ A+HS KD+P+ +GL ++A+ R+D RD+ ++ S+ D Sbjct: 58 TGVFVKELENALYEGKAHFAIHSLKDVPSIQPEGLVLAAFPTRQDPRDLLLTRGGVSVAD 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L VIGT S RR + + + I+ D RG I+TRL KL + + AI+LA AG+KRL Sbjct: 118 LPSPCVIGTGSPRRMVQVAKLKEQITFADLRGNIDTRLKKLEDGQYDAIVLAAAGLKRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 KE + + P+ GQGAI IE ++ + ++K IN T ++ ER+++ + Sbjct: 178 KEIAESAYMPTDVCLPAIGQGAIAIECRADDAETIAMLKSINDAATETAIVAERSYMKTI 237 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G CK + +A + + + ++ + DA +G+ + I + Sbjct: 238 GGGCKFPLGAYATVESDEVNLHVMLGNHHTGQIIRMHETSTVADAEKLGQKLGEAIIAEA 297 Query: 301 NK---NVF 305 K + Sbjct: 298 EKQGIEIL 305 >gi|323489960|ref|ZP_08095181.1| porphobilinogen deaminase [Planococcus donghaensis MPA1U2] gi|323396256|gb|EGA89081.1| porphobilinogen deaminase [Planococcus donghaensis MPA1U2] Length = 309 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 114/304 (37%), Positives = 169/304 (55%), Gaps = 5/304 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL + L P I + TKGDRI + L+++GGKG Sbjct: 1 MRKIIVGSRRSKLALTQTNQFIDKLKAAGA--PFEFEIKEIVTKGDRIVDVMLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ L EID AVHS KDMP+ L +GL I RED RD +I++ L DL Sbjct: 59 LFVKEIEQALFDREIDFAVHSMKDMPSVLPEGLAIGCIPEREDPRDAYIANDHVKLLDLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 + +V+GTSSLRR + LL R D+ + RG I+TRL KL + AI+LA AG+KR+ Sbjct: 119 VGAVVGTSSLRRSSQLLLLRPDLDIQWIRGNIDTRLAKLKSGDFDAIILAAAGLKRMGWK 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ E L +++ P+ GQG++ IE + + + +NHEDT +VN ER FL ++D Sbjct: 179 DDLVTEFLEVDECLPAIGQGSLGIECREEDTELLSELAKLNHEDTALAVNAERKFLKDMD 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSC+ IAG+A K + F G++ + + + + D I GR A+ I Sbjct: 239 GSCQVPIAGYATVKDGEVTFTGLISSPEADQVFKEMAISH--DPIEAGRIVAEKISAQGG 296 Query: 302 KNVF 305 ++ Sbjct: 297 YDLI 300 >gi|16124327|ref|NP_418891.1| porphobilinogen deaminase [Caulobacter crescentus CB15] gi|221233009|ref|YP_002515445.1| porphobilinogen deaminase [Caulobacter crescentus NA1000] gi|24211766|sp|Q9ABZ8|HEM3_CAUCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800240|sp|B8GXG1|HEM3_CAUCN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|13421169|gb|AAK22059.1| porphobilinogen deaminase [Caulobacter crescentus CB15] gi|220962181|gb|ACL93537.1| porphobilinogen deaminase [Caulobacter crescentus NA1000] Length = 322 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 119/320 (37%), Positives = 169/320 (52%), Gaps = 16/320 (5%) Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIP----PHNIV----IIPLSTKGDRIT 51 M ++P RIG R S L+LA + ++ + +P I +IP+ T GDRI Sbjct: 1 MSRQPPIRIGARGSKLSLAQSGLMQARIAHALGVPAGASKDEIEAAAPLIPIVTSGDRIQ 60 Query: 52 NRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI 111 +R L EIGGKGLFT+EIE+ L+ G IDCAVHS KDMP +L GL ++A RED RD FI Sbjct: 61 DRRLMEIGGKGLFTKEIEEALLDGRIDCAVHSLKDMPAELPPGLVLAATPEREDPRDAFI 120 Query: 112 SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILL 171 SH + L+DL + +GT+SLRR+A L R D+ ++ RG ++TRL KL +A AILL Sbjct: 121 SHVCERLEDLPKGARLGTASLRRQAQALHVRPDLEIVMLRGNVDTRLAKLERGEADAILL 180 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A +G+ RL + + L+ + PP+PGQGA+ IET ++ + T +V Sbjct: 181 AQSGLNRLGLGHLTRSWLDPDACPPAPGQGALVIETR-AEDIGAPWLEAVRCRQTTIAVA 239 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN------GNRCDA 285 ER L L+GSC++AI A G+ L L DG + + +A Sbjct: 240 AERGALLALEGSCRTAIGARAILDGARLSMIVEALTPDGAQRFRREGDITLTGADDIAEA 299 Query: 286 INIGRDAAQYIRFISNKNVF 305 G +R + Sbjct: 300 RAFGLTLGAEVRAAGGDAII 319 >gi|331085795|ref|ZP_08334878.1| porphobilinogen deaminase [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406718|gb|EGG86223.1| porphobilinogen deaminase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 292 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 101/298 (33%), Positives = 159/298 (53%), Gaps = 7/298 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ R+G+R S LA+ + L +H P I ++ + T GD+I +R+L +IGGK Sbjct: 1 MKRKIRVGSRESKLAVVQSEMIIQELKKLH--PQLEIELVTMKTTGDKILDRSLDQIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+++ L+ GEID AVH KDMP + + L I AY RED RDV + A+ ++ Sbjct: 59 GLFVKELDRALLDGEIDLAVHCLKDMPMETPEELPILAYSRREDPRDVLV--PAKGKENW 116 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 VIG SS RR+ L + D V RG I+TRL KL++ + ++LA AG+KRL Sbjct: 117 NGQGVIGCSSFRRRIQLQKLYPDAEVRGIRGNIQTRLQKLDSGQYDVLVLAAAGLKRLGL 176 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I+ + E+ P+ GQG + ++ + +ELVK + E+ ERAF+ LD Sbjct: 177 EERIERYFSPEEILPAAGQGILVVQ---GREEMRELVKKLQPEEMEVIAENERAFVRRLD 233 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G C S +A + + L G+ D + ++ + ++G + A +R Sbjct: 234 GGCSSPVAAYGRIEQDELVLTGLYYEEDTGNYVIATKRAEVRASAHLGWELADELRTK 291 >gi|319760696|ref|YP_004124634.1| porphobilinogen deaminase [Candidatus Blochmannia vafer str. BVAF] gi|318039410|gb|ADV33960.1| porphobilinogen deaminase [Candidatus Blochmannia vafer str. BVAF] Length = 310 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 99/299 (33%), Positives = 145/299 (48%), Gaps = 2/299 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR S LA+ + + L H P I ++P+ T GD+ N T Sbjct: 1 MNTKFLRIATRKSRLAICQSEYVCNELKRFH--PNIKIKLVPIVTTGDKFFNSTTKIKIK 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG F +E+E LI D AVHS KDM L L + R D RD F+S ++ Sbjct: 59 KGAFIKELEYALIENRADIAVHSMKDMTASLPNELILPILCKRIDPRDAFVSIKYSNIDM 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S+IGTSSLRR+ + RSD+++ + RG I+TR+ KL+ K AI+LA AG+ RL Sbjct: 119 LPSGSIIGTSSLRRQCQIQARRSDLTLHNLRGNIDTRIKKLHQGKYDAIILAVAGLNRLH 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + IK +N +D P+ GQGAI IE + L+ + H++T + ERA L Sbjct: 179 LTQYIKTYINPKDLLPAMGQGAIAIECRKKDIDTLSLLSPLYHQETSLRIQSERAVTTYL 238 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C+ IA ++ ++ ++ DG A +G A+ + Sbjct: 239 EGYCQFPIASYSEIHNHQIWLRALIGLPDGSKIIRTEGRAPFDQAEKLGLFLAKKLLNQ 297 >gi|307293495|ref|ZP_07573339.1| porphobilinogen deaminase [Sphingobium chlorophenolicum L-1] gi|306879646|gb|EFN10863.1| porphobilinogen deaminase [Sphingobium chlorophenolicum L-1] Length = 308 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 123/312 (39%), Positives = 167/312 (53%), Gaps = 20/312 (6%) Query: 1 MEK--KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M+K +P R+GTR SPLALA A T ++L H + I+ + T GDRI +R L EI Sbjct: 1 MQKPFRPLRLGTRGSPLALAQAHMTIAALRARHGWDEGAVEIVVVQTSGDRIQDRALAEI 60 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGK L+T+E+++ L+ GEID AVHS KD+ T ++I+A LPR D+RD + A S Sbjct: 61 GGKALWTKELDRALLEGEIDFAVHSMKDVETIRPAEIRIAAMLPRADVRDRLV--GAASF 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L V+GTSS RR A + R R D V+ FRG + TRL KL +AHA LLA AG+ R Sbjct: 119 DALPEKPVVGTSSPRRAAQVKRLRPDAGVVLFRGNVATRLAKLEKGEAHATLLAAAGLDR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + V + E P+P QGA+ IET N +L+ IN DT+D V ERA L Sbjct: 179 LGQSDVGV-AIPAEVMLPAPSQGAVGIETLSGNGAMLDLLATINDADTFDCVMAERAVLV 237 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQY 295 L G+C S IA + +Y +++ DG+ S R D A +GR Sbjct: 238 GLGGTCHSPIAALGRLEEGRIYLRAEIISPDGQETIGDSLRIERNDVATAEAMGR----- 292 Query: 296 IRFISNKNVFNF 307 + + Sbjct: 293 -------GLLEW 297 >gi|262038272|ref|ZP_06011662.1| hydroxymethylbilane synthase [Leptotrichia goodfellowii F0264] gi|261747739|gb|EEY35188.1| hydroxymethylbilane synthase [Leptotrichia goodfellowii F0264] Length = 316 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 113/318 (35%), Positives = 163/318 (51%), Gaps = 22/318 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVH----------------KIPPHNIVIIPLS 44 M+ IGTR S LALA A + + L+ + K I + + Sbjct: 1 MKSNKIIIGTRGSILALAQAEKVKEMLIAKYDELRKKEDFKGISDFNKNESLTIELKIIV 60 Query: 45 TKGDRITNRTLTEIGG---KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYL 101 T GD+ R +I G K LF +EIEK+++ +ID AVHS KDMP + +GL + + Sbjct: 61 TTGDKDL-RDFDKIKGTTQKELFVKEIEKEMLENKIDFAVHSLKDMPQQTPEGLLNACFP 119 Query: 102 PREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 RED RDV +S + + L +L SVIGT S+RR+ LL R DI + RG I TRL KL Sbjct: 120 LREDNRDVIVSKSGKKLNELREKSVIGTGSIRRETELLNLRKDIIIKPIRGNIHTRLKKL 179 Query: 162 NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221 +N + AI+LA AG+KR I E E F P+PGQG +CI+ N+ + +EL+++I Sbjct: 180 DNGEYDAIILAAAGLKRTGLSDRITEYFEDEVFMPAPGQGILCIQCRENDDRIRELLEII 239 Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281 N ++ ER F DG C + I + +G+TL G V DGK G+ Sbjct: 240 NDKEVGIMCETEREFSRIFDGGCHTPIGCSSTIEGNTLKLKG-VYNKDGKRIFS-EIEGD 297 Query: 282 RCDAINIGRDAAQYIRFI 299 + + I + A+ I+ Sbjct: 298 KNNPKEIAQKLAKEIKNN 315 >gi|302896420|ref|XP_003047090.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256728018|gb|EEU41377.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 334 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 100/317 (31%), Positives = 152/317 (47%), Gaps = 15/317 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K +GTR SPLALA +L + P H I ++T GDR N L GGKG Sbjct: 7 KNVINVGTRKSPLALAQTNIVVDALKA--QFPDHEFPIHGMTTTGDRDQNTALYNFGGKG 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-------HTA 115 L+T ++E++L++ E+D VHS KDMPT L +G + RED RD + H Sbjct: 65 LWTSQLEERLVNKELDLVVHSLKDMPTSLPEGCVLGCVTSREDPRDTLVIKKSLQEKHGW 124 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYA 174 ++L DL S+IGTSS+RR A L+R + D RG I+TRL KL ++ I+LA A Sbjct: 125 KTLADLPAGSIIGTSSVRRIAQLVRRYPTLKFKDHRGNIQTRLQKLEDDPELTGIILAAA 184 Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 G++R+ I + L + + GQGA+ +E ++ K + +K I +E T + Sbjct: 185 GLQRMDLGHHISQFLESDTGGILHAVGQGALGVECRADDEKVLKFLKTIENEQTMLACEA 244 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIG 289 ERA + L+G C I L V++ G + +A G Sbjct: 245 ERAVMRALEGGCSVPIGVETKWVDGKLRLRATVVSLRGDEGVDAEMTEEIKTQEEADTFG 304 Query: 290 RDAAQYIRFISNKNVFN 306 + A+++ + + Sbjct: 305 KKVAKHLVDQGAGKILD 321 >gi|209147746|gb|ACI32904.1| Porphobilinogen deaminase [Salmo salar] Length = 359 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 106/284 (37%), Positives = 145/284 (51%), Gaps = 6/284 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIGTR S LA L ++ P +I I+ ++T GD+I + L++IG K L Sbjct: 17 RVIRIGTRNSQLARIQTDSVAEKLKGLY--PDVHIEIVGMTTTGDKILDTALSKIGEKSL 74 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-- 121 FT+E+E L E+D VHS KD+PT L G I A L RE+ D + H K L Sbjct: 75 FTKELETALERNEVDLVVHSLKDLPTTLPPGFTIGAVLKRENPHDAVVLHPQNMGKSLDT 134 Query: 122 -ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 SVIGTSSLRR A L + + D RG + TRL KL+ AI+LA AG++R+ Sbjct: 135 LPDKSVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDEKGDFSAIILAAAGLRRM 194 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E + +IL ED + GQGAI IE + E+V V++ +T ERAFL Sbjct: 195 GWESRVSQILGPEDCMYAVGQGAIAIEVRAKDKDILEMVSVLHDPNTVLRCIAERAFLRR 254 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283 L+G C +A K S LY G V + DG + + + Sbjct: 255 LEGGCSVPVAVHTEVKDSQLYLTGAVYSLDGSDSLKETMQTSIA 298 >gi|217031453|ref|ZP_03436958.1| hypothetical protein HPB128_21g11 [Helicobacter pylori B128] gi|298736817|ref|YP_003729347.1| hydroxymethylbilane synthase [Helicobacter pylori B8] gi|216946653|gb|EEC25249.1| hypothetical protein HPB128_21g11 [Helicobacter pylori B128] gi|298356011|emb|CBI66883.1| hydroxymethylbilane synthase [Helicobacter pylori B8] Length = 306 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 95/302 (31%), Positives = 150/302 (49%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + T GD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECF---IESEIQIVKTTGDKILDAPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ G ID AVHS KD+P KGL ++ R D RD F+S L L + Sbjct: 61 KELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADARDTFLSVKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEKV 184 +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL + Sbjct: 121 KVGTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E N+ L + +N E++ + ER F+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKNHKHFITL-QKLNDEESAFCCHLEREFIKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + + A G + ++ +GK + G++ A ++ ++ + K + Sbjct: 240 QIPVGVHANLMGDEVKIQAVLGLPNGKEVITKEKQGDKNKAFDLVQELLEEFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|167767183|ref|ZP_02439236.1| hypothetical protein CLOSS21_01702 [Clostridium sp. SS2/1] gi|167711158|gb|EDS21737.1| hypothetical protein CLOSS21_01702 [Clostridium sp. SS2/1] gi|291559492|emb|CBL38292.1| porphobilinogen deaminase [butyrate-producing bacterium SSC/2] Length = 780 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 109/298 (36%), Positives = 154/298 (51%), Gaps = 4/298 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 + IG+R S LAL + L + P H I + TKGD+I N+ L +IGGKGLF Sbjct: 2 KYIIGSRGSRLALIQTKYVQEKLAKAY--PEHTFEIQIIKTKGDKIQNKPLDKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE+K+ISGEI VHS KDMP+ KGL + RED RDV I TA+ L +L Sbjct: 60 VKEIEEKIISGEIHMGVHSMKDMPSTPAKGLVFTKVWKREDPRDVLILRTAKHLSELREG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +VI T S RR LL+ R D+ +I+ RG ++TRL K+ + I+LA AG+KRL E V Sbjct: 120 AVIATGSKRRAFQLLKLRPDLQIINIRGNVDTRLRKMEEQQLDGIVLAAAGLKRLGMEDV 179 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + L ED +P QGA+ +E + + Q+++ V E+T + V ER FL ++ GSC Sbjct: 180 ITQYLAPEDMISAPAQGALALEVREDQKELQKMLDVFCDEETMNEVCAERNFLEQMGGSC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 + Y + DG G + + A + I+ Sbjct: 240 HTPAGARCQKTDQGYELYAMFGNEDGSKQAYTKVYGTC--PEILAQTAVKNIKKQLAG 295 >gi|15611292|ref|NP_222943.1| porphobilinogen deaminase [Helicobacter pylori J99] gi|11133270|sp|Q9ZMJ7|HEM3_HELPJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|4154748|gb|AAD05809.1| PORPHOBILINOGEN DEAMINASE [Helicobacter pylori J99] Length = 306 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 98/307 (31%), Positives = 155/307 (50%), Gaps = 7/307 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK IG+R S LAL A + L I + T GD+I + L +IGG Sbjct: 1 MEK--LVIGSRGSELALWQANHIKERLKKECS---MESEIRIVKTTGDKILDAPLNKIGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L Sbjct: 56 KGLFTKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMS 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL Sbjct: 116 LPKGAKVGTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLN 175 Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ ++++ PS GQGA+ +E N+ L + +N+E++ + ER F+ Sbjct: 176 VQGAKYRKAFSVKEMIPSMGQGALGVEMLKNHKHFITL-QKLNNEESAFCCHLEREFIKG 234 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I A G + ++ +GK + G++ A ++ ++ + Sbjct: 235 LNGGCQIPIGVHANLMGDEVKIRAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEEFLQS 294 Query: 300 SNKNVFN 306 K + Sbjct: 295 GAKEILE 301 >gi|167042167|gb|ABZ06900.1| putative porphobilinogen deaminase, dipyromethane cofactor-binding domain protein [uncultured marine crenarchaeote HF4000_ANIW93H17] Length = 311 Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 107/304 (35%), Positives = 161/304 (52%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 F +GTR S L+LA S L K P I ++TKGD T R L I KG+F Sbjct: 2 TFLVGTRGSNLSLAQTNWVISELQK--KNPSSEFEIKTITTKGDTDT-RALFTIDQKGIF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EI+K + +ID AVHS KD+P+ + K L I+ RE DV I+ +LK + L Sbjct: 59 EKEIDKAVAEKQIDFAVHSLKDVPSDISKSLTIACVPKRESANDVLITKDGSNLKTIQLS 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR + R R D+ V RG IETR+NK+ + K AI+LA AGI RL + V Sbjct: 119 AVVGTSSLRRAVQVSRIRPDVVVKPVRGNIETRINKVIDGKFDAIILAEAGISRLGLD-V 177 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 +L+ +DFPPSPGQGA+ I ++ K ++K I + + + ERA ++ C Sbjct: 178 KHSVLSTKDFPPSPGQGALAIVCRADDDKTISMLKKIEDKKSRIEIEAERALSDYVESGC 237 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + + A L + DGKI ++ + G+ + N+G++ + ++ + Sbjct: 238 RFPVGALAIANSGMLKLTVSAYSVDGKISIKLEKTGDVDNPKNLGQELGKELKKSGIAEI 297 Query: 305 -FNF 307 N+ Sbjct: 298 ASNW 301 >gi|158520980|ref|YP_001528850.1| porphobilinogen deaminase [Desulfococcus oleovorans Hxd3] gi|226740631|sp|A8ZWG5|HEM3_DESOH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|158509806|gb|ABW66773.1| porphobilinogen deaminase [Desulfococcus oleovorans Hxd3] Length = 310 Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 105/303 (34%), Positives = 153/303 (50%), Gaps = 7/303 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LA+ L I+P+ T+GD++ N + +IG KG+FT Sbjct: 3 IRIGSRKSSLAMWQTCYVEDKLKQ----SGITTSILPIDTRGDQVLNVAIAKIGSKGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLALH 124 EE+E KL G+ID AVHSAKDMP+ L G ++ A+ RE+ DV + + D + Sbjct: 59 EELEAKLADGDIDIAVHSAKDMPSVLPDGFELIAFTDREEPADVLVSHKKDLDISDSSRP 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IGTSS+RR+ALL R+ + +D RG ++TR+ K+ AIL+AYAGI R+ + + Sbjct: 119 VTIGTSSVRRQALLGRFYPHVRTVDIRGNVQTRVLKMKEGLCDAILMAYAGIHRMGMDDL 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVN--NPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + + F P GQG I +E K + + INH + + ERAFL L+G Sbjct: 179 IVHTFSPDTFIPPVGQGCIAVEASSRLAAEKKEAIRACINHPASETCLLAERAFLKRLEG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C A G L G +++ DGK F +R G A IG D ++ Sbjct: 239 GCSIPAFALARLNGDRLTLSGGLMSLDGKKFIFNTRAGAGSQATAIGTDLGNHVLENGGA 298 Query: 303 NVF 305 + Sbjct: 299 ALL 301 >gi|257459674|ref|ZP_05624783.1| porphobilinogen deaminase [Campylobacter gracilis RM3268] gi|257443099|gb|EEV18233.1| porphobilinogen deaminase [Campylobacter gracilis RM3268] Length = 309 Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 103/305 (33%), Positives = 149/305 (48%), Gaps = 7/305 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR S LAL + S L + + TKGD+I + L +IGGKG Sbjct: 1 MKNLIIATRGSVLALWQSKHIASLLNAR----GIQAQLKSMKTKGDKILDTPLAKIGGKG 56 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E+ ++ GE AVHS KD+P + +GL ++A RED+RD IS +L Sbjct: 57 LFTKELEESMLRGESHIAVHSLKDVPVEFPQGLVLAAICAREDVRDAMISEKYSKFDELP 116 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-- 180 + +GT+SLRRK LL R D+ VI RG ++TRL KL + + AI+LA AGI RL Sbjct: 117 RGAKVGTTSLRRKMQLLSMRPDLEVISLRGNVQTRLRKLKDGEFDAIILAMAGINRLNLR 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I P+ GQGA+ IE + P+ ++ + E ER F+ L Sbjct: 177 AEVKHVAPFEISQMIPAMGQGALGIEAV-DEPQILRAIEFLKDERAIIETTVERDFVRVL 235 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I A +G ++ IV DG S + ++G + A+ Sbjct: 236 EGGCQVPIGINARLEGENIHISAIVGLPDGSESIRQSIVAQKSQYQSVGAELARVFIEKG 295 Query: 301 NKNVF 305 K + Sbjct: 296 AKQLL 300 >gi|307332259|ref|ZP_07611338.1| porphobilinogen deaminase [Streptomyces violaceusniger Tu 4113] gi|306882087|gb|EFN13194.1| porphobilinogen deaminase [Streptomyces violaceusniger Tu 4113] Length = 319 Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats. Identities = 97/304 (31%), Positives = 150/304 (49%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L + P ++P++T GDR L+++GGKG FT Sbjct: 15 IRIVSRSSPMALAQVERVRAELAALR--PGIRTEVVPVTTSGDRWMG-DLSKLGGKGAFT 71 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +AYL R+DIRD I +L ++ Sbjct: 72 KEVDAALLAGEADLAVHCIKDVPADRPLPAGTVFAAYLKRDDIRDAVIHPEGLTLDEMPA 131 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSS+RR A L ++ + RG RL KL + A++LA +G++R+ + Sbjct: 132 GTRIGTSSVRRVAQLAITHPELECVPMRGNANRRLEKLEAGECDALMLAVSGLERIGRTD 191 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I EIL ++ P G G + ++ ++ + E V + D W + ER L L G Sbjct: 192 RISEILPVDTMCPPIGAGVLGLQCREDDTETIEAVAGLGDADVWKEITAERMLLHVLQGH 251 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG+A + L V + DGK + D +G A + + Sbjct: 252 CNSPIAGYAKAERDGRLSLRARVFSPDGKRVLDAHEWAGPLDPATLGTSVAVALLRQGAR 311 Query: 303 NVFN 306 V + Sbjct: 312 EVID 315 >gi|210134437|ref|YP_002300876.1| porphobilinogen deaminase [Helicobacter pylori P12] gi|226706287|sp|B6JKG8|HEM3_HELP2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|210132405|gb|ACJ07396.1| porphobilinogen deaminase [Helicobacter pylori P12] Length = 306 Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats. Identities = 97/302 (32%), Positives = 151/302 (50%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGTIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-V 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++++ PS GQGA+ +E N K ++ +N E + ER F+ L+G C Sbjct: 181 YRKAFSVKEMIPSMGQGALGVEML-KNHKHFATLQKLNDEKSAFCCRLEREFIKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A ++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVITKEKRGDKTKAFDLVQELLEEFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|257791816|ref|YP_003182422.1| porphobilinogen deaminase [Eggerthella lenta DSM 2243] gi|257475713|gb|ACV56033.1| porphobilinogen deaminase [Eggerthella lenta DSM 2243] Length = 327 Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats. Identities = 94/314 (29%), Positives = 148/314 (47%), Gaps = 15/314 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A L P ++ + + TKGDRI L++IG KGLFT Sbjct: 4 MRIGTRGSKLALWQAHHVADLLRAAS--PGMDVSVEVVKTKGDRILGVALSKIGDKGLFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L G +D VHS KD+PT L +GL ++ L R D RDV ++ + + L S Sbjct: 62 KELEQALFDGRVDVCVHSMKDVPTALPEGLALAGCLIRADARDVLVAASGTTFAGLPAGS 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT +LRR + L R D+ ++ RG ++TR+ K+ + A++LA AGI+R+ + Sbjct: 122 RVGTGALRRLSQLRAVRDDLDYVEVRGNLDTRIAKVRDGALDAVVLAAAGIERMGWSAEV 181 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E +++ P+ GQGAI +E ++ + + T V ER + LDG C+ Sbjct: 182 AEAFSVDTVVPAVGQGAIGLEVRADDERTARACAQVRCAATDACVAAERHVMRALDGGCQ 241 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS-------------RNGNRCDAINIGRDA 292 I +A + L V + DG +A + + A Sbjct: 242 VPIGAYARYEEGLLVLDAFVGSLDGSHVLRSRLSAASQPPNDTDAVEAAVREARALAQRA 301 Query: 293 AQYIRFISNKNVFN 306 + + V + Sbjct: 302 VEEFEAQGARAVLD 315 >gi|15644865|ref|NP_207035.1| porphobilinogen deaminase [Helicobacter pylori 26695] gi|2495174|sp|P56140|HEM3_HELPY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|2313328|gb|AAD07304.1| porphobilinogen deaminase (hemC) [Helicobacter pylori 26695] Length = 306 Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats. Identities = 97/302 (32%), Positives = 151/302 (50%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E N K ++ +N E + ER F+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KNHKHFATLQKLNDEKSAFCCRLEREFIKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A ++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVITKEKQGDKTKAFDLVQELLEEFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|295687518|ref|YP_003591211.1| porphobilinogen deaminase [Caulobacter segnis ATCC 21756] gi|295429421|gb|ADG08593.1| porphobilinogen deaminase [Caulobacter segnis ATCC 21756] Length = 333 Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats. Identities = 117/315 (37%), Positives = 168/315 (53%), Gaps = 15/315 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKI----PPHNIV----IIPLSTKGDRITNRTLT 56 P RIG R S L+LA + ++ + I +IP+ T GDRI +R L Sbjct: 17 PIRIGARGSKLSLAQSGLMQARIAAALGAPAGASKEEIEAFAPLIPIVTSGDRIQDRRLM 76 Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116 EIGGKGLFT+EIE+ L+ G IDCAVHS KDMP +L GL ++A RED RD FISH + Sbjct: 77 EIGGKGLFTKEIEEALLDGRIDCAVHSLKDMPAELPPGLVLAATPEREDPRDAFISHVCE 136 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L+DL + +GT+SLRR+A L R D+ ++ RG ++TRL KL +A AILLA +G+ Sbjct: 137 RLEDLPKGARLGTASLRRQAQALHVRPDLEIVMLRGNVDTRLAKLERGEADAILLAQSGL 196 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 RL + K ++ + PP+PGQGA+ IET + + T +V ER Sbjct: 197 NRLGLGHLTKSWIDPDACPPAPGQGALVIETR-AEDIGAAWLDAVRCRPTTIAVAAERGA 255 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE----VSRNG--NRCDAINIGR 290 L L+GSC++AI A G+ L L +G ++ +G + +A+ +G Sbjct: 256 LLALEGSCRTAIGARATLDGARLSMIVEALTPNGAQRFRRHGEITLSGGDDAGEALALGL 315 Query: 291 DAAQYIRFISNKNVF 305 +R + Sbjct: 316 KLGAEVRAEGGDAIL 330 >gi|332208884|ref|XP_003253541.1| PREDICTED: porphobilinogen deaminase, partial [Nomascus leucogenys] Length = 332 Score = 221 bits (563), Expect = 9e-56, Method: Composition-based stats. Identities = 103/306 (33%), Positives = 152/306 (49%), Gaps = 17/306 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA ++L ++ P II +ST GD+I + L++IG K Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177 + L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++ Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFRHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQ 194 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 195 RMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 254 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCDAI 286 L+G C +A K LY G V + DG + + +G D Sbjct: 255 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQ 314 Query: 287 NIGRDA 292 +G A Sbjct: 315 LVGITA 320 >gi|86131003|ref|ZP_01049602.1| Porphobilinogen deaminase [Dokdonia donghaensis MED134] gi|85818414|gb|EAQ39574.1| Porphobilinogen deaminase [Dokdonia donghaensis MED134] Length = 304 Score = 221 bits (563), Expect = 9e-56, Method: Composition-based stats. Identities = 91/304 (29%), Positives = 145/304 (47%), Gaps = 10/304 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A + L D + ++P+ + GD I ++ L E+G Sbjct: 1 MS-KTIRIGTRDSELALWQAKTVQKQLEDH----GYTTELVPVKSTGDLILDKPLYELGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ +++G +D AVHS KD+PT L G+ +A LPR + D+ + D Sbjct: 56 TGIFTKTLDVAMLNGTVDIAVHSMKDVPTALPIGIVQAAVLPRAETEDILVHKG---APD 112 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 I T SLRR+A L + D RG + TRL KL + + A AG+KR+ Sbjct: 113 YKQACTIATGSLRRQAQWLNRYPNHKTTDIRGNVNTRLQKLEESDWTGAIFAKAGLKRIN 172 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+ ++ P+P QGA+ + + ++E +N T + ER FL L Sbjct: 173 VLPENYEV--LDWMIPAPAQGAMLVVAMEEDAFSKEACAKLNDRTTALCTHIEREFLRTL 230 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C + I A + F G++ + DG EV + + +A+ G D A + Sbjct: 231 EGGCTAPIGALAQEIDGAIRFKGVLFSLDGATKIEVEQVVSTENALGFGTDCALEVLDNG 290 Query: 301 NKNV 304 + + Sbjct: 291 GRAL 294 >gi|319956650|ref|YP_004167913.1| hydroxymethylbilane synthase [Nitratifractor salsuginis DSM 16511] gi|319419054|gb|ADV46164.1| hydroxymethylbilane synthase [Nitratifractor salsuginis DSM 16511] Length = 317 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 95/301 (31%), Positives = 153/301 (50%), Gaps = 2/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LAL A+ + + P + ++ ++++GD+I +R L +GGKG F Sbjct: 3 KLTIVTRASQLALWQAYHIKDRIEKAR--PELEVELMEITSRGDKILDRPLALVGGKGHF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E ++++G AVHS KD+PT + +GL+++A R+D DVF+SH SL+ L Sbjct: 61 TKELEDEMLAGRAQMAVHSLKDVPTFIPEGLELAAITERQDQSDVFLSHRFSSLEALPEG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GT+SLRR+ LL+ R D+ V D RG + TRL KL + AI+LAY G+ RL K Sbjct: 121 AVVGTTSLRRRMQLLQRRPDLIVKDLRGNVNTRLRKLAEGQYDAIILAYIGLARLDLLKE 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + +E P GQ A+ IE + + + L ++ +T ER F+A + C Sbjct: 181 IPHVQKLEWMIPPMGQAALGIEILSGDEELRHLAMELDDPETHLCTEIEREFVAAVGAGC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A A L ++ D +A G+ A+ + + Sbjct: 241 SAPVAVNARIIDGELDLRAMLGYPDASEVLYEELVLPMEEATGAGKRLAEKMIADGALEL 300 Query: 305 F 305 Sbjct: 301 L 301 >gi|296423212|ref|XP_002841149.1| hypothetical protein [Tuber melanosporum Mel28] gi|295637383|emb|CAZ85340.1| unnamed protein product [Tuber melanosporum] Length = 349 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 99/312 (31%), Positives = 155/312 (49%), Gaps = 11/312 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K RIG+R S LAL R SL ++ P N II ++T GD + L G K Sbjct: 28 RKNIRIGSRKSKLALVQTHLVRDSLQAIY--PDTNFEIIAMTTTGDNNQTKPLHNFGAKA 85 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119 L+T+E+E L+ +++ VHS KDMPT+L G +I A L RED RD + T +SL+ Sbjct: 86 LWTQELEVLLLEDKLEMIVHSLKDMPTQLPHGCKIGAILEREDPRDALVMKTGSSYKSLE 145 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIK 177 DL SV+GTSS+RR A + + ++ D RG + TRL KL++ + ++LA AG+ Sbjct: 146 DLPEGSVVGTSSVRRSAQIKKRYPHLNFEDVRGNVGTRLAKLDDPASSYTCLILAAAGLI 205 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL + I L+ + GQGA+ +E + ++++V+ H++T ER+ + Sbjct: 206 RLDLGERITGYLSSPCLLHAVGQGALGVEIRDGDEDTAKMLRVLGHKETTLHCLAERSLM 265 Query: 238 AELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAA 293 L+G C I + +V++ DG+ F V A N GR A Sbjct: 266 RTLEGGCSVPIGVETETATNGQMLMRAVVVSLDGQNFVNVEERMEVAGEEAADNFGRVVA 325 Query: 294 QYIRFISNKNVF 305 + ++ Sbjct: 326 GKLVAAGAGDIL 337 >gi|154496817|ref|ZP_02035513.1| hypothetical protein BACCAP_01110 [Bacteroides capillosus ATCC 29799] gi|150274069|gb|EDN01169.1| hypothetical protein BACCAP_01110 [Bacteroides capillosus ATCC 29799] Length = 287 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 88/296 (29%), Positives = 143/296 (48%), Gaps = 11/296 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIG+R S LA+ + ++ P + ++ + T GD+I +RTL ++GGKGLF Sbjct: 2 KLRIGSRESVLAVTQSELVMEAIRAF--DPSIELELVTMKTTGDKILDRTLDKVGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 E++ L+ G +D VHS KD+P + L ++ + RED RD + ++ D Sbjct: 60 VRELDAALLEGRVDITVHSCKDLPMETDPRLPLAGFSKREDPRDALVLPAGKTELD--PS 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IG +S RR L D+ V RG ++TRL KL+ + A++LA AG+KRL E Sbjct: 118 LPIGCASRRRAIQLAALYPDMEVAPVRGNVQTRLRKLDEGQYSALVLASAGLKRLGLEGR 177 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E+ P+ GQG + ++T + + + + ERAF+ LDG C Sbjct: 178 IARYFTAEEMIPAAGQGILAVQTRAG--ENYPCLAAVTDREGTICALAERAFVRMLDGGC 235 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 S +A G TL G+ +G+ +G +A +G A+ ++ + Sbjct: 236 SSPVAAHGVVDGDTLILTGM--DENGR---RDRISGPVTEAEQLGETLARRMKEAA 286 >gi|295131995|ref|YP_003582671.1| porphobilinogen deaminase [Zunongwangia profunda SM-A87] gi|294980010|gb|ADF50475.1| porphobilinogen deaminase [Zunongwangia profunda SM-A87] Length = 304 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 91/304 (29%), Positives = 149/304 (49%), Gaps = 10/304 (3%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K RIGTR S LAL A +S+L + H ++P+ + GD + L E+G Sbjct: 1 MNKVIRIGTRDSELALWQAKTVQSALEKL----GHQTELVPVKSTGDLNLDVPLYEMGIT 56 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT+ ++ +++G++D AVHS KD+PT L KG+ +A L R + +D+ I L Sbjct: 57 GIFTKTLDIAMLTGKVDIAVHSMKDVPTALPKGIVEAAVLKRANTKDILIHKGTDFLDAQ 116 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 I T SLRRK+ L V+D RG + TR+ KL ++ + + A AG++R+ Sbjct: 117 G---TIATGSLRRKSQWLHRYPTHEVVDLRGNVNTRMQKLEDSNWNGAIFAAAGLERI-- 171 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E + ++++ P+P QGA+ + + + + +NH T V+ ER FL L+ Sbjct: 172 EIKPENFIDLDWMIPAPAQGAMLVVALEKDEFTRTAIGALNHYQTDLEVHVEREFLRTLE 231 Query: 242 GSCKSAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C + I A L+F G + + DG EV + + G+ A+ I Sbjct: 232 GGCTAPIGALAKIDNDNILHFKGALFSLDGSQKIEVEKRIAADNVAEFGKFCAKEILAKG 291 Query: 301 NKNV 304 + Sbjct: 292 GAKL 295 >gi|39940760|ref|XP_359917.1| hypothetical protein MGG_04860 [Magnaporthe oryzae 70-15] gi|145010915|gb|EDJ95571.1| hypothetical protein MGG_04860 [Magnaporthe oryzae 70-15] Length = 340 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 94/324 (29%), Positives = 157/324 (48%), Gaps = 21/324 (6%) Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + +IGTR SPLA+ T + L H P + ++T+GD+ L +G Sbjct: 1 MSNSRVIKIGTRRSPLAIRQVEHTVALLQKAH--PDITFEVNAIATQGDKDKVSPLPSMG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT----- 114 KG++T E+E L +GE+D VH KDMPT L ++ A + RED RDV + Sbjct: 59 -KGMWTNELEAMLTTGEVDFIVHCLKDMPTTLPDNCELGAVMEREDPRDVVVIKPKHVQA 117 Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILL 171 +++ DL S++GTSS RR + L RW ++ D+RG I+TRL KL+ + + I+L Sbjct: 118 GCKTIADLPKGSLVGTSSPRRSSQLKRWYPELRFRDYRGNIDTRLRKLDAEDGEFDCIIL 177 Query: 172 AYAGIKRLKKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227 A AG+ R+ + I + L+ + GQGA+ +E + + ++++ + T Sbjct: 178 AAAGLHRMDQHSRIAQYLDSTTEGGGVLHAVGQGALGLEVRKGDIETLKVIECLVDMPTM 237 Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNR--- 282 + ER + L+G C I +G TL V+A DG + + + Sbjct: 238 KAGWAERTVMRTLEGGCSVPIGVETSWSDEGKTLRLRATVVALDGSEAVDADASASVSNQ 297 Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306 +A +G+ +Q + K + + Sbjct: 298 EEAEALGKQVSQVLVERGAKKILD 321 >gi|33520023|ref|NP_878855.1| porphobilinogen deaminase [Candidatus Blochmannia floridanus] gi|39931423|sp|Q7VRM4|HEM3_BLOFL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|33504369|emb|CAD83262.1| porphobilinogen deaminase [Candidatus Blochmannia floridanus] Length = 311 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 103/304 (33%), Positives = 153/304 (50%), Gaps = 3/304 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR-TLTEIG 59 M+ K RI TR SPLA+ A + L H P +IP+ T GD + + T Sbjct: 1 MQAKILRIATRKSPLAICQACYVCNKLK--HYHPHIQTELIPIITTGDTSLHTVSKTNKI 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 KG F +E+E LI D AVHS KD+ L K L I R D RD F+S ++ Sbjct: 59 KKGAFIKELEYALIEHRADIAVHSMKDVTVLLPKELIIPVLCKRHDPRDAFVSIQYPNIH 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L S+IGTSSLRR+ + RSD+ + D RG I TR+ KL+ + +AI+LA AG+ RL Sbjct: 119 SLPTGSIIGTSSLRRQCQIRAQRSDLILHDLRGNINTRIKKLHQGQYNAIILAVAGLTRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 K K I+ ++ + P+ GQG I IE +N+ L+ + H++T + ERA Sbjct: 179 KLTKYIQTYIDPSELLPAMGQGVIAIECRINDINTISLLSPLYHKETSLCIKSERAVTTY 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+ C+ IA +A + + ++ ++ DG I + A +G + A+ + Sbjct: 239 LESYCRLPIASYAEIQNNQIWLRALIGLPDGSIIIRTEGIASLDKAEELGLNLAKDLLIQ 298 Query: 300 SNKN 303 KN Sbjct: 299 FKKN 302 >gi|239814381|ref|YP_002943291.1| porphobilinogen deaminase [Variovorax paradoxus S110] gi|239800958|gb|ACS18025.1| porphobilinogen deaminase [Variovorax paradoxus S110] Length = 308 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 102/301 (33%), Positives = 151/301 (50%), Gaps = 9/301 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A ++ L + H + ++ ++T+GD+I +++L+++GGKGLF Sbjct: 11 IVIATRESRLALWQAEHVQALLQER----GHAVSLLGMTTRGDQILDKSLSKVGGKGLFV 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P L +G ++ L RED RD +S SL +L + Sbjct: 67 KELELALEEGRADIAVHSLKDVPMDLPEGFVLACVLEREDPRDALVSPRHASLDELPQGA 126 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR LL R D+ + RG ++TRL KL+ AI+LA AG+KRL E I Sbjct: 127 VVGTSSLRRVVLLRALRPDLRIEPLRGNLDTRLRKLDQGHYDAIVLAAAGLKRLGLEHRI 186 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + + P+ GQGA+ IE + L+ ++H W + ERA + GSC Sbjct: 187 RVAFDPDTMLPAAGQGALGIEVRADRTDLIALLAALSHSRDWLATAAERAVSRSMGGSCS 246 Query: 246 SAIAGFAYCK-GSTLYFYGIVLASDGK-IFHEVSRNGNRCD---AINIGRDAAQYIRFIS 300 +A A + L +G V D A +G AA +R Sbjct: 247 MPLAAHARWQADGALRVDAAWGDPEGNAALVRVHAQAPAADFAQAGALGERAAALLRDAG 306 Query: 301 N 301 Sbjct: 307 A 307 >gi|154298906|ref|XP_001549874.1| hypothetical protein BC1G_11700 [Botryotinia fuckeliana B05.10] gi|150857605|gb|EDN32797.1| hypothetical protein BC1G_11700 [Botryotinia fuckeliana B05.10] Length = 379 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 98/315 (31%), Positives = 147/315 (46%), Gaps = 15/315 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IGTR S LA+ + +++L H P N I L T GD+ L + G K L+ Sbjct: 52 TIHIGTRKSALAMVQTEQVKAALEKAH--PHLNFEITKLETMGDKNQVTALHDFGAKSLW 109 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T E+E L+ ++D VH KDMPT+L I A L RED RD I +SL +L Sbjct: 110 THELEALLLDRKLDIVVHCLKDMPTQLPSKCIIGAILEREDPRDALIMKAGSNYKSLSEL 169 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRL 179 SV+GTSS+RR A + R ++ + RG I TRLNKL ++ K ++LA AG+ R+ Sbjct: 170 PAGSVVGTSSVRRSAQIARKYPELKFENARGNIGTRLNKLDADDGKYSCLILAAAGLLRM 229 Query: 180 KKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + I + L+ + + GQGA+ +E + + ++ + HE T + ER+ Sbjct: 230 GWGERITQYLDSKTEGGGMLHAVGQGALALEVRDGDEEIGTMISALQHEPTQLAGLAERS 289 Query: 236 FLAELDGSCKSAIAG-FAYCKGSTLYFYGIVLASDGKIFHEVSR---NGNRCDAINIGRD 291 + L+G C I + + L IV++ DG E R DA G Sbjct: 290 LMRTLEGGCSVPIGVETTWIEKGKLLMKAIVVSLDGTESVESERLEEILTPKDADEFGWS 349 Query: 292 AAQYIRFISNKNVFN 306 AQ + + Sbjct: 350 LAQDLVSKGAAKILE 364 >gi|67459209|ref|YP_246833.1| porphobilinogen deaminase [Rickettsia felis URRWXCal2] gi|75536359|sp|Q4ULA5|HEM3_RICFE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|67004742|gb|AAY61668.1| Porphobilinogen deaminase [Rickettsia felis URRWXCal2] Length = 301 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 107/301 (35%), Positives = 163/301 (54%), Gaps = 5/301 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR SPLAL + P N I+P+ T GD I N+ L +IGG Sbjct: 1 MTN-SIRIGTRKSPLALIQTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K LF +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++ Sbjct: 58 KALFLKEIEQALLDKKIDLAVHSLKDVPGRIPEELVIAAILEREDPRDVFVCLNYKSIEE 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++VIG+S++RRKA + + RSD+ V FRG I++R+ KL + A +LAYAG+KRL+ Sbjct: 118 LPQNAVIGSSAVRRKAFIQKIRSDLKVTVFRGNIDSRIKKLMTAEVDATILAYAGLKRLR 177 Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 ++ P GQG I +E ++ E+ INH T++ + ERAFL Sbjct: 178 AFNPEYCHLIEYSQMLPCIGQGVIAVEIRQDDNAMLEICNQINHLPTFELIKPERAFLEY 237 Query: 240 LDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 LD +C++ IA ++ Y + ++ D + + + G AA+ + Sbjct: 238 LDANCRTPIAAYSKYLDADNIQTDFMLGNLDCSKIIFHTEVTDINTSKEAGIKAAKMMLN 297 Query: 299 I 299 Sbjct: 298 Q 298 >gi|317010518|gb|ADU84265.1| porphobilinogen deaminase [Helicobacter pylori SouthAfrica7] Length = 306 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 94/303 (31%), Positives = 151/303 (49%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IG+R S LAL A + L I + T GD+I + L +IGGKGLF Sbjct: 3 KLVIGSRGSELALWQANYIKERLKKECF---IESEIQIVKTTGDKILDAPLNKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L Sbjct: 60 TKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITQRADVRDTFLSAQFPDLMSLPKG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183 + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG++RL + Sbjct: 120 AKVGTTSLRRSMQLKCKRKDLDTESLRGNVQTRLKKLECGEFDAIVLAEAGLRRLNIQGA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ ++E+ PS GQGA+ +E + K ++ +N E + + ER F+ L+G Sbjct: 180 KYRKAFSVEEMIPSMGQGALGVEML-KSHKHFSTLQKLNDEKSAFCCHLEREFIKGLNGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ + A G + I+ +G+ + G++ A ++ ++ + + Sbjct: 239 CQIPVGVHASLMGEKVKIQAILGLPNGEEVITKEKQGDKNKAFDLVQELLEAFLQNGARE 298 Query: 304 VFN 306 + Sbjct: 299 ILE 301 >gi|325661929|ref|ZP_08150549.1| porphobilinogen deaminase [Lachnospiraceae bacterium 4_1_37FAA] gi|325471781|gb|EGC74999.1| porphobilinogen deaminase [Lachnospiraceae bacterium 4_1_37FAA] Length = 292 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 101/298 (33%), Positives = 159/298 (53%), Gaps = 7/298 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ R+G+R S LA+ + L +H P I ++ + T GD+I +R+L +IGGK Sbjct: 1 MKRKIRVGSRESKLAVVQSEMIIQELKKLH--PQLEIELVTMKTTGDKILDRSLDQIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+++ L+ GEID AVH KDMP + + L I AY RED RDV + A+ ++ Sbjct: 59 GLFVKELDRALLDGEIDLAVHCLKDMPMETPEELPILAYSRREDPRDVLV--PAKGKENW 116 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 VIG SS RR+ L + D V RG I+TRL KL++ + ++LA AG+KRL Sbjct: 117 NGQGVIGCSSFRRRIQLQKLYPDAEVRGIRGNIQTRLQKLDSGQYDVLVLAAAGLKRLGL 176 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+ I+ + E+ P+ GQG + ++ + +ELVK + E+ ERAF+ LD Sbjct: 177 EERIERYFSPEEILPAAGQGILVVQ---GREEMRELVKELQPEEMEVIAENERAFVRRLD 233 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G C S +A + + L G+ D + ++ + ++G + A +R Sbjct: 234 GGCSSPVAAYGRIQQDELVLTGLYYEEDTGNYVIATKRAEVRASAHLGWELADELRTK 291 >gi|312129517|ref|YP_003996857.1| hydroxymethylbilane synthase [Leadbetterella byssophila DSM 17132] gi|311906063|gb|ADQ16504.1| hydroxymethylbilane synthase [Leadbetterella byssophila DSM 17132] Length = 300 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 99/303 (32%), Positives = 160/303 (52%), Gaps = 11/303 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA+ A +S L I+ + TKGD++ + L++IG KG+F Sbjct: 2 KIRIGTRVSLLAMWQANYIKSRLEAA----GAETEIVGMETKGDKVLDVALSKIGSKGVF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 TEE+E+KL++GEI AVHSAKDM + L + ++ A+ RE DV + A DL+ Sbjct: 58 TEELEEKLLNGEIHIAVHSAKDMQSSLAEDFELIAFTEREYPGDVLV---ADRALDLSAP 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IGTSS+RR A + I +++ RG ++TR+ K+ + + + LAYAG+ R++ +++ Sbjct: 115 ITIGTSSVRRIAFFKKHYPHIKLVNMRGNLQTRIQKMRSGQCDGLALAYAGVHRMEYDEL 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV--INHEDTWDSVNCERAFLAELDG 242 I ++ F P GQG + +E N + + N E+T+ + ERAFL E++G Sbjct: 175 IVHRFPLDQFIPPVGQGTVTVEIAKNLDENIKTFVKNTCNDENTYKCLQAERAFLKEMNG 234 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C + G A +G + F G + +G + G D I +G+ AA+ + Sbjct: 235 GCSIPVFGHATLEGEEILFKGGITNLEGTEEVSMEFRGT--DPILLGQHAAEQVLQNGGA 292 Query: 303 NVF 305 + Sbjct: 293 EIL 295 >gi|315023924|gb|EFT36926.1| Porphobilinogen deaminase [Riemerella anatipestifer RA-YM] gi|325335710|gb|ADZ11984.1| Porphobilinogen deaminase [Riemerella anatipestifer RA-GD] Length = 306 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 97/308 (31%), Positives = 157/308 (50%), Gaps = 10/308 (3%) Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M K +IGTR SPLAL A E ++L + + I+P+ + GD+ + L + Sbjct: 1 MSLMKNTIKIGTRNSPLALWQAKEVAAALEQKN----YATEIVPIVSSGDKNLTQPLYSL 56 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G G+FT++++ L++ +ID AVHS KD+PT+L + + + AYL R+ +DV + ++ + Sbjct: 57 GITGVFTKDLDIALLNKQIDIAVHSLKDVPTQLPQNIALIAYLERDYPQDVLV-RSSNAK 115 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 I TSSLRR+A L+ + D RG ++TRL KL + A A L + AG+KR Sbjct: 116 DKSLEELTIATSSLRRRAFWLKQFPNTKFSDIRGNVQTRLQKLEDGIADATLFSLAGLKR 175 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + ++ +P QG + + H +N + E+VK INH T V ER FL Sbjct: 176 MALDIP---YEHLPFMISAPSQGVVTVAGHTDNTEINEIVKTINHHQTQVCVEIERQFLN 232 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+G C + I FA + F G + + +GK E++ N G + A + Sbjct: 233 RLEGGCTAPIGAFAEFNEEEIKFQGRLCSLNGKECLELNETFAWKQGRNFGNELADKLLA 292 Query: 299 ISNKNVFN 306 K + + Sbjct: 293 NGGKAIMD 300 >gi|298674197|ref|YP_003725947.1| porphobilinogen deaminase [Methanohalobium evestigatum Z-7303] gi|298287185|gb|ADI73151.1| porphobilinogen deaminase [Methanohalobium evestigatum Z-7303] Length = 308 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 97/300 (32%), Positives = 150/300 (50%), Gaps = 7/300 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IGTR S LAL L + N + + T GD T+R L E+GG G F Sbjct: 3 LIIGTRGSSLALTQTRRVSQMLKE----EGVNTFLKIIKTSGDSFTDRPLHELGGVGAFV 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EI+++++SGE+D AVHS KD+PT+ + L SA L R+ D ++ +L +L + Sbjct: 59 REIDERMLSGELDIAVHSMKDLPTERPEELPTSAVLKRDSPFDALLTRDGSTLDELPEGA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGT+SLRRK+ +LR+R D V RG I+TRL KL + I+LA AG++R+ + + Sbjct: 119 VIGTTSLRRKSQVLRYRPDFDVQSLRGNIDTRLKKLESGIYDGIILAEAGLRRMGWDIPV 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L+ + F PS QGAI + + +++ +V INH T ER + + G C Sbjct: 179 HQ-LDTDHFCPSANQGAIAV-VAKSGDESENVVSRINHPQTKIETEIERILIGNVGGGCI 236 Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 I +A ++ VLA DG + V + + + + + K + Sbjct: 237 VPIGAYAEFVNDEKIHIRSEVLALDGSHYVAVDDVISADNYKEEANELGEELVRKGGKKL 296 >gi|326804046|ref|YP_004321864.1| hydroxymethylbilane synthase [Aerococcus urinae ACS-120-V-Col10a] gi|326650262|gb|AEA00445.1| hydroxymethylbilane synthase [Aerococcus urinae ACS-120-V-Col10a] Length = 332 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 92/329 (27%), Positives = 157/329 (47%), Gaps = 28/329 (8%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +RIGTR S LA+ + E +L V+ P ++ LSTKGD+ + L++IGG Sbjct: 1 MT--TYRIGTRSSRLAMQQSLEVVRALEAVY--PQDEFQLVKLSTKGDKDKSSPLSKIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG+F IE+ L G++D VHS KD+P++L +G ++A R+D DV ++ D Sbjct: 57 KGVFVRWIEQALAQGKVDFIVHSLKDVPSELAQGTVLAAIPKRQDPGDVILTAKGMDWHD 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR-- 178 L + +GT SLRR A L R D+ ++ RG I++RL+KL A++LA AG+KR Sbjct: 117 LPNGARVGTGSLRRLAQLHALRPDLEIVHVRGNIDSRLDKLARGDFQALVLATAGLKRLQ 176 Query: 179 ----------------------LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQE 216 L ++ ++++ P+ GQGA+ ++ ++ + +E Sbjct: 177 LLDYPFDSQRFNQKEVNSEAHILNNYELQAHAFSLDEMIPAVGQGALAVQCLNDDQQTRE 236 Query: 217 LVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV 276 +++ ++ +T +V CER L L C + + KG + ++ DG Sbjct: 237 VLQAVDDPETHQAVACERVVLKALGADCNYPVGAYGQIKGQEINLTAMIGRQDGFALVRS 296 Query: 277 SRNGNRCDAINIGRDAAQYIRFISNKNVF 305 A+ +G+ Q + Sbjct: 297 QLEAPLDQALALGQAVYQDLLDQGAGKWL 325 >gi|319792195|ref|YP_004153835.1| porphobilinogen deaminase [Variovorax paradoxus EPS] gi|315594658|gb|ADU35724.1| porphobilinogen deaminase [Variovorax paradoxus EPS] Length = 308 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 104/301 (34%), Positives = 153/301 (50%), Gaps = 9/301 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL A ++ L + H + ++ ++T+GD+I +++L+++GGKGLF Sbjct: 11 IVIATRESRLALWQAEHVQALLQER----GHTVSLLGMTTRGDQILDKSLSKVGGKGLFV 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E + G D AVHS KD+P L +G ++ L RED RD +S SL +L + Sbjct: 67 KELETAIEDGRADIAVHSLKDVPMDLPEGFVLACVLEREDPRDAMVSPRYASLDELPHGA 126 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL E I Sbjct: 127 VVGTSSLRRVVLLKARRPDVRIEPLRGNLDTRLRKLDEGQYDAIILAAAGLKRLGLEDRI 186 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + +D P+ GQGA+ IE + EL+ + H W S ERA + GSC Sbjct: 187 RVAFEPDDMLPAAGQGALGIEVRADREDLIELLAPLAHRGDWLSTAAERAVSRAMGGSCS 246 Query: 246 SAIAGFAYCK-GSTLYFYGIVLASDGKI-FHEVSRNGNRCD---AINIGRDAAQYIRFIS 300 +A A + L +G V + D A +G AA +R Sbjct: 247 MPLAAHARWQADGVLRIDAAWGDPEGNAPLVRVHAQADVGDFGRADALGEHAAALLRDAG 306 Query: 301 N 301 Sbjct: 307 A 307 >gi|313206850|ref|YP_004046027.1| porphobilinogen deaminase [Riemerella anatipestifer DSM 15868] gi|312446166|gb|ADQ82521.1| porphobilinogen deaminase [Riemerella anatipestifer DSM 15868] Length = 303 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 96/305 (31%), Positives = 156/305 (51%), Gaps = 8/305 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K +IGTR SPLAL A E ++L + + I+P+ + GD+ + L +G Sbjct: 1 MKNTIKIGTRNSPLALWQAKEVAAALEQKN----YATEIVPIVSSGDKNLTQPLYSLGIT 56 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT++++ L++ +ID AVHS KD+PT+L + + + AYL R+ +DV + ++ + Sbjct: 57 GVFTKDLDIALLNKQIDIAVHSLKDVPTQLPQNIALIAYLERDYPQDVLV-RSSNAKDKS 115 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 I TSSLRR+A L+ + D RG ++TRL KL + A A L + AG+KR+ Sbjct: 116 LEELTIATSSLRRRAFWLKQFPNTKFSDIRGNVQTRLQKLEDGIADATLFSLAGLKRMAL 175 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + ++ +P QG + + H +N + E+VK INH T V ER FL L+ Sbjct: 176 DIP---YEHLPFMISAPSQGVVTVAGHTDNTEINEIVKTINHHQTQVCVEIERQFLNRLE 232 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C + I FA + F G + + +GK E++ N G + A + Sbjct: 233 GGCTAPIGAFAEFNEEEIKFQGRLCSLNGKECLELNETFAWKQGRNFGNELADKLLANGG 292 Query: 302 KNVFN 306 K + + Sbjct: 293 KAIMD 297 >gi|313676857|ref|YP_004054853.1| hydroxymethylbilane synthase [Marivirga tractuosa DSM 4126] gi|312943555|gb|ADR22745.1| hydroxymethylbilane synthase [Marivirga tractuosa DSM 4126] Length = 311 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 103/303 (33%), Positives = 157/303 (51%), Gaps = 7/303 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A ++ + H I + TKGD+I + +++IG KG+FT Sbjct: 3 IRIGTRGSKLALWQAEYVKTRIEKA----GHTAEIKIIQTKGDKILDVAISKIGSKGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-SHTAQSLKDLALH 124 EEIE +L G ID AVHSAKDM ++L +G + A+ RE + DV + + + D Sbjct: 59 EEIEAQLEDGNIDIAVHSAKDMQSELPQGFDLIAFTEREKVNDVLVSHKDSIDINDKDNP 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 VIGTSS RR A L + I +D RG ++TR+ K+ AILLAYAG+ R++ + Sbjct: 119 IVIGTSSTRRIATLKHFYPHIKTVDIRGNLQTRIRKMEEGLCDAILLAYAGVHRMEYDDK 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI--NHEDTWDSVNCERAFLAELDG 242 IK L+ ++F P+ GQG++ IE H + ++ + NH +T + ERA+L L G Sbjct: 179 IKLELSTQEFIPAVGQGSVAIEVHESIEDDKKQMLRFALNHRNTEYCLRAERAYLRHLQG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C + G A +++ +++ DG+ + A +G A+ I Sbjct: 239 GCSIPVFGLATLNSNSIEMEAGIISLDGQERISMKLTDETSRAEELGTLIARQILKKGGD 298 Query: 303 NVF 305 V Sbjct: 299 KVL 301 >gi|89900504|ref|YP_522975.1| porphobilinogen deaminase [Rhodoferax ferrireducens T118] gi|122996949|sp|Q21XQ9|HEM3_RHOFD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|89345241|gb|ABD69444.1| porphobilinogen deaminase [Rhodoferax ferrireducens T118] Length = 315 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 106/302 (35%), Positives = 152/302 (50%), Gaps = 10/302 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M I TR S LAL A + L H + ++ ++T GD+I +R L+++GG Sbjct: 1 MS--TLTIATRESRLALWQAEYVQDLLTRR----GHQVGLLGMTTLGDQILDRALSKVGG 54 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L G D AVHS KD+P +L G ++ + RED RD F+S+ +L Sbjct: 55 KGLFVKELEVALEDGRADLAVHSLKDVPMELPDGFALACVMEREDPRDAFVSNQYANLAS 114 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR ALL R D+ + RG ++TRL KL++ AI+LA AG+KRL Sbjct: 115 LPQGAVVGTSSLRRMALLRALRPDLKIEPLRGNLDTRLRKLDDGMYAAIVLAAAGLKRLG 174 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ D P+ GQGA+ IE + + + H TW +V+ ERA + Sbjct: 175 LSQRIRATFEPTDMLPAAGQGALGIEVRSQRQDVIDALAPLAHHTTWLAVSAERAVSRAM 234 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGK-IFHEVSRNGNRCD---AINIGRDAAQYI 296 GSC +A +A L DGK V + D A +G A + Sbjct: 235 GGSCSMPLAAYATLAADILTIDAAWGDPDGKLALVHVRASAAVSDLASATALGARVAADL 294 Query: 297 RF 298 R Sbjct: 295 RA 296 >gi|156064079|ref|XP_001597961.1| hypothetical protein SS1G_00047 [Sclerotinia sclerotiorum 1980] gi|154690909|gb|EDN90647.1| hypothetical protein SS1G_00047 [Sclerotinia sclerotiorum 1980 UF-70] Length = 379 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 97/315 (30%), Positives = 146/315 (46%), Gaps = 15/315 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IGTR S LA+ + +++L H P N I L T GD+ L + G K L+ Sbjct: 52 TIHIGTRKSALAMVQTEQVKAALEKAH--PNLNFEITKLETMGDKNQVTALHDFGAKSLW 109 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T E+E L+ +D VH KDMPT+L + I A L RED RD I ++L +L Sbjct: 110 THELEALLLERNLDIVVHCLKDMPTQLPQKCTIGAILEREDPRDALIMKAGSNYKTLSEL 169 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRL 179 SV+GTSS+RR A + ++ + RG I TRLNKL ++ K ++LA AG+ R+ Sbjct: 170 PAGSVVGTSSVRRSAQIAMKYPELKFENARGNIGTRLNKLDADDGKYSCLILAAAGLLRM 229 Query: 180 KKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + I + L+ + + GQGA+ +E + + +V + HE T + ER+ Sbjct: 230 GWGERITQYLDSKTEGGGMLHAVGQGALALEVRDGDEEINTMVSALQHEPTQLAGLAERS 289 Query: 236 FLAELDGSCKSAIAG-FAYCKGSTLYFYGIVLASDGKIFHEVSR---NGNRCDAINIGRD 291 + L+G C I + + L IV++ DG E R DA G Sbjct: 290 LMRTLEGGCSVPIGVETTWIEKGKLLMKAIVVSLDGTESVESERLEEILTPKDADEFGWT 349 Query: 292 AAQYIRFISNKNVFN 306 AQ + + Sbjct: 350 IAQDLVSKGAAKILE 364 >gi|111019045|ref|YP_702017.1| porphobilinogen deaminase [Rhodococcus jostii RHA1] gi|110818575|gb|ABG93859.1| hydroxymethylbilane synthase [Rhodococcus jostii RHA1] Length = 321 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 92/318 (28%), Positives = 148/318 (46%), Gaps = 18/318 (5%) Query: 1 ME---KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57 M + RIGTR S LA A R +L+ H+ ++ + TKGD+ E Sbjct: 1 MSAVGTRTLRIGTRGSELATTQAGTVRDALISA----GHDAELVIIKTKGDQSMES--VE 54 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 G G+FT E+ + L G +D AVHS KD+PT + I+A PRED RD ++ Sbjct: 55 KIGVGVFTAELREALADGRVDVAVHSYKDLPTAPDERFTIAAIPPREDPRDALVARDGLV 114 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L +L S +GTS+ RR + L + + RG ++ RL K+ + + A++LA AG+ Sbjct: 115 LGELPAGSKVGTSAPRRTSQLRALGLGLDIRPLRGNLQRRLGKVESGELDAVVLARAGLA 174 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + +I E + P+P QGA+ +E N ++ ++ ++ +V ERA L Sbjct: 175 RIGRLDLITESIEPVQMLPAPAQGALAVECLSANTALVAILSELDDPNSRAAVTAERALL 234 Query: 238 AELDGSCKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 AEL+ C + + A L G A DG G+ +A + Sbjct: 235 AELEAGCTAPVGAIAEVVESLDDDGRIFDELSVRGCAAAIDGSDVIRTGAVGSPENAEEL 294 Query: 289 GRDAAQYIRFISNKNVFN 306 GR A+ + + + + N Sbjct: 295 GRSVARELLELGARELMN 312 >gi|284992946|ref|YP_003411500.1| porphobilinogen deaminase [Geodermatophilus obscurus DSM 43160] gi|284066191|gb|ADB77129.1| porphobilinogen deaminase [Geodermatophilus obscurus DSM 43160] Length = 312 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 91/304 (29%), Positives = 152/304 (50%), Gaps = 8/304 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+GTR S LA + ++ +P + ++ +ST+GDR ++ + ++GG G+F Sbjct: 8 TLRLGTRASQLATTQSQAVADAITAASGVP---VELVHISTEGDR-SSVAIAQLGGTGVF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 I + L+ G +D AVHS KD+PT GL I+A PRED RD ++ +L +L Sbjct: 64 VTAIRQALLEGTVDVAVHSYKDLPTLPEPGLTIAAVPPREDPRDALVARDGLTLGELPAG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT + RR A L + V+ RG ++TR+ ++ A++LA AG+ RL + Sbjct: 124 ARVGTGAPRRVAQLRALGLGLEVVPIRGNVDTRMARVVPGDLDAVVLARAGLSRLGRLSA 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E L+ P+P QGA+ +E N+ + ++L+ ++ T V ER LA L+ C Sbjct: 184 VTETLDPLQVLPAPAQGALAVECRGNDERTRQLLAALDDAATRACVVAERTTLAALEAGC 243 Query: 245 KSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 + +A +A G L+ V A DG S G +A +GR+ A + Sbjct: 244 SAPVAAYAEVAEGEDGPELFLRASVTALDGSDGVRGSITGPPPEAERLGRELAAELLDRG 303 Query: 301 NKNV 304 + Sbjct: 304 AAEL 307 >gi|255280051|ref|ZP_05344606.1| hydroxymethylbilane synthase [Bryantella formatexigens DSM 14469] gi|255269142|gb|EET62347.1| hydroxymethylbilane synthase [Bryantella formatexigens DSM 14469] Length = 309 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 93/295 (31%), Positives = 151/295 (51%), Gaps = 6/295 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ IG+R S LA+ + + ++ + P + I+ + T GD+I +RTL ++GGK Sbjct: 1 MKRTIIIGSRESRLAVIQSEIVKQAIEQEN--PQLAVSILTMKTTGDKILDRTLDKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+++ L+ D +VHS KD+P ++ K L + A+ RED+RDV + D Sbjct: 59 GLFVKELDRALLEKRSDLSVHSLKDVPMEVPKELPLLAFSAREDVRDVLVLPEGAVEPD- 117 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 G S RR + ++ RG + TRL KL+ + A++LA AG+KRL Sbjct: 118 -FSKPFGCSGRRRALQIKELYPHVTCHPVRGNVLTRLRKLDEGEYGALILAAAGLKRLGL 176 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I + E+ P+ GQG + ++ +K + ++ D+ CERAF+ LD Sbjct: 177 EGRISRYFSTEEMVPAAGQGILAVQGRCGED--HSYLKAFSDDEARDAALCERAFVRALD 234 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 G C S +A +A +GS + G+ D + G R DA IG + A+Y+ Sbjct: 235 GGCSSPVAAYARTEGSRILLTGLYYEEDTGRWCRGCLGGARTDAERIGAELAEYL 289 >gi|146298706|ref|YP_001193297.1| porphobilinogen deaminase [Flavobacterium johnsoniae UW101] gi|146153124|gb|ABQ03978.1| porphobilinogen deaminase [Flavobacterium johnsoniae UW101] Length = 307 Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 96/306 (31%), Positives = 158/306 (51%), Gaps = 11/306 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K RIGTR S LAL A L D+ + I+ + ++GD I ++ L E+G Sbjct: 1 MAEKTIRIGTRDSELALWQAHNVEKKLNDL----GYKTSIVAVKSQGDIILDKPLYELGI 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ +I+G+ID AVHS KD+PT L KG+ A LPR ++ D+ + D Sbjct: 57 TGIFTKTLDIAMINGDIDIAVHSMKDVPTALPKGIVQGAVLPRANVLDILVHKG---NPD 113 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 S I T SLRR+A + +V+D RG + TR+ KL +N + A AG++R+ Sbjct: 114 FTNPSTIATGSLRRQAQWFNKYPNHTVVDLRGNVNTRMQKLQDNNWDGAVFAAAGLERIN 173 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + +N++ P+P QGA+ + N+ + + +N +T + ER FL L Sbjct: 174 LKPEN--YINLDWMIPAPAQGAMLVVGMENDNYTLDALSQLNDIETEICTHIERQFLRTL 231 Query: 241 DGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +G C + I TL+F G++L+ DGK E+++ + + +G ++AQ I Sbjct: 232 EGGCTAPIGALVTYNEDEDTLHFQGVLLSIDGKQKLEINKTVDISEWKKLGFNSAQEILN 291 Query: 299 ISNKNV 304 + Sbjct: 292 NGGTEL 297 >gi|301630638|ref|XP_002944423.1| PREDICTED: porphobilinogen deaminase-like [Xenopus (Silurana) tropicalis] Length = 343 Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 102/302 (33%), Positives = 155/302 (51%), Gaps = 8/302 (2%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 I TR S LAL A ++ L H + ++ L+T+GD+I +R+L++IGGKGLF + Sbjct: 46 VIATRESRLALWQAAHVQALLAAR----GHAVTLLGLTTQGDQILDRSLSKIGGKGLFVK 101 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 E+E L G D AVHS KD+P +L G ++ + RED RD F+S SL L +V Sbjct: 102 ELELALEQGRADIAVHSLKDVPMELPAGFALACVMEREDARDAFVSPRYASLDALPQGAV 161 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSSLRR+ LL R + + RG ++TRL KL+ + AI+LA AG+KRL + I+ Sbjct: 162 VGTSSLRRQVLLQALRPGLRIEPLRGNLDTRLRKLDAGQYDAIVLAAAGLKRLGLGERIR 221 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 + + P+ GQGA+ IE + + + + H TW +V ERA + GSC Sbjct: 222 SVFAPAEILPAAGQGALGIEVRSDRQDLIDALAPLAHRPTWLTVAAERAVSRAMGGSCSM 281 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSR---NGNRCDAINIGRDAAQYIRFISNK 302 +A +G+TL+ +G+ A +G A +R + Sbjct: 282 PLAAHGQWQGNTLHLDAAWGDPEGRTALVRAQVQAAVATLAQAEALGDAVAARLRAGGAQ 341 Query: 303 NV 304 + Sbjct: 342 GL 343 >gi|297190129|ref|ZP_06907527.1| porphobilinogen deaminase 2 [Streptomyces pristinaespiralis ATCC 25486] gi|197721156|gb|EDY65064.1| porphobilinogen deaminase 2 [Streptomyces pristinaespiralis ATCC 25486] Length = 311 Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 97/304 (31%), Positives = 147/304 (48%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L +H P ++P+ T GD+ L+ + GKG FT Sbjct: 7 IRIVSRDSPMALAQVERVRAELAALH--PGIRTEVVPVKTTGDKWMG-DLSLVEGKGAFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +A+L R+D+RD I +L +L Sbjct: 64 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTVFAAFLERDDVRDALIHPGGLTLDELPE 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSS+RR A L + + RG RL KL A A+LLA +G++R+ + Sbjct: 124 GARIGTSSVRRIAQLAVSHPHLECVPMRGNANRRLEKLAAGDADALLLAVSGLERIGRTD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI + L+ + P G G + ++ + + V + H T V ER FL L G Sbjct: 184 VITQTLSTDVMCPPIGAGVLALQCREGDSALIDTVSDLGHPGTHREVTAERMFLHVLQGH 243 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG+A + L V + DGK+ R D +G A + + Sbjct: 244 CNSPIAGYARSERNGELSLRAKVFSPDGKVILNAHEWAGRLDPATLGTSVAVALLRQGAR 303 Query: 303 NVFN 306 + + Sbjct: 304 ELID 307 >gi|213964875|ref|ZP_03393074.1| porphobilinogen deaminase [Corynebacterium amycolatum SK46] gi|213952411|gb|EEB63794.1| porphobilinogen deaminase [Corynebacterium amycolatum SK46] Length = 310 Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 90/301 (29%), Positives = 146/301 (48%), Gaps = 7/301 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA A R +L+++ ++ + T GD + + +IG G+F Sbjct: 6 TIRIGTRGSELATTQAGHVRDALIEL----GQPAELVIVKTAGDHNRHDPVEKIGI-GVF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+ + L G D VHS KD+PT + ++A R D R+ IS A L DL Sbjct: 61 TQALRHALREGVCDIIVHSFKDLPTVPEDDMMVAAVPERVDPREALISRDATPLMDLPEG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTS+ RR + L RSD+ ++ RG IETR+ ++ + A++LA AG++R + Sbjct: 121 ARVGTSAPRRVSQLRALRSDLELVPLRGNIETRMGRV-SEDLDAVILARAGLERTGRLGE 179 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+++ P+P QGA+ +E + + ++++ I+H + ERA L +L+ C Sbjct: 180 IAESLDVDVLMPAPAQGALALECRTADREIVDILRKIDHPVSHARAVAERAVLNKLEAGC 239 Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 + +A +A L V A DG + N A +GR A + Sbjct: 240 TAPVAAYATVSDSGELTLQAGVFALDGSRQLLETATANVDKADELGRKVAAALLERGAHE 299 Query: 304 V 304 V Sbjct: 300 V 300 >gi|320168193|gb|EFW45092.1| porphobilinogen deaminase [Capsaspora owczarzaki ATCC 30864] Length = 333 Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 101/314 (32%), Positives = 143/314 (45%), Gaps = 11/314 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + R+G+R S LAL + L ++ + +ST GD + +R L++IG Sbjct: 1 MSGRVVRVGSRKSELALIQTNSVIARLKAIYS--DCTFELTTMSTTGDNVLDRALSKIGE 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---S 117 K LFT+E+E L E+D VHS KD+PT L G+ I A R+ D I + Sbjct: 59 KSLFTKELEVALAQNEVDLVVHSLKDLPTTLPPGMTIGAICKRDSPYDAVILRAKFAGLT 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGI 176 L L SVIGTSSLRR A L R + D RG + TRL KL++ ++LA AG+ Sbjct: 119 LATLPEGSVIGTSSLRRIAQLRRAFPHLVFRDVRGNLNTRLRKLDDAETYAGLILAEAGL 178 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ + + EIL E + GQGA+ IE N+ EL+K + DT ERAF Sbjct: 179 DRMGWQGRVSEILKPEVTLYAVGQGALAIECRENDTATLELLKPLQDNDTTLRCTAERAF 238 Query: 237 LAELDGSCKSAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN---IGRD 291 + L+G C + L G V + DG R DA +G+ Sbjct: 239 MRSLEGGCSVPLGVHTEFDASSGQLRLRGGVFSLDGTDSRFAERTITATDAATASGLGQA 298 Query: 292 AAQYIRFISNKNVF 305 A + + Sbjct: 299 LATEMIAAGAAEIL 312 >gi|269215656|ref|ZP_06159510.1| hydroxymethylbilane synthase [Slackia exigua ATCC 700122] gi|269131143|gb|EEZ62218.1| hydroxymethylbilane synthase [Slackia exigua ATCC 700122] Length = 318 Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 95/311 (30%), Positives = 142/311 (45%), Gaps = 7/311 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M IGTR S LAL A + ++ P + I + T GDR L EIG Sbjct: 1 MHNDTCVIGTRGSALALWQAHAVKRAIEA--SRPDVSCEIRVIKTTGDRNLATPLAEIGD 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QS 117 KGLFT+++E L++GE+D VHS KD+PT+L G I+A L R D RDV + + Sbjct: 59 KGLFTKDLEAALVAGEVDICVHSMKDVPTELANGCGITAMLERADARDVIVCGPRIQAEC 118 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L D+ S +GT SLRR A + S I RG ++TR+ K + +LA AG+ Sbjct: 119 LADVPAGSRLGTGSLRRVAQIRAGFSGIVPTPIRGNVDTRIAKACGEEYEGAVLAAAGVT 178 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ I + + + P+ GQGA+ IE + + + EL I+ T V ER L Sbjct: 179 RMGLADRIAAYIPVSEIVPAVGQGAVGIEARLGDERVCELCARIDDAATRVCVEAERIVL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA--INIGRDAAQY 295 L+G C+ + + + +V + DG V+ DA ++ R Sbjct: 239 CALEGGCQVPMGAYMRFDSGDIAADAVVASVDGSRVARVALRVPASDATPADVARRVLAE 298 Query: 296 IRFISNKNVFN 306 + + Sbjct: 299 LSAQGADVILE 309 >gi|223648136|gb|ACN10826.1| Porphobilinogen deaminase [Salmo salar] Length = 359 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 103/284 (36%), Positives = 146/284 (51%), Gaps = 6/284 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIGTR S LA L ++ P ++ I+ ++T GD+I + L++IG K L Sbjct: 17 RVIRIGTRKSQLARIQTDSVAEKLKGLY--PDVHLEIVGMTTTGDKILDTALSKIGEKSL 74 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-- 121 FT+E+E L E+D VHS KD+PT L G I A L RE+ D + H K L Sbjct: 75 FTKELETALEKNEVDLVVHSLKDLPTTLPPGFTIGAVLKRENPHDAVVLHPKNMGKSLDT 134 Query: 122 -ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 SVIGTSSLRR A L + + D RG + TRL KL+ + AI+LA AG++R+ Sbjct: 135 LPDKSVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDEKDDFSAIILAAAGLRRM 194 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + +IL ED + GQGA+ IE + E+V V++ +T ERAFL Sbjct: 195 GWDSRVSQILGPEDCMYAVGQGALAIEVRARDEDILEMVSVLHDPNTVLRCIAERAFLRR 254 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283 L+G C +A K S LY G V + DG + + + Sbjct: 255 LEGGCSVPVAVHTEVKDSQLYLTGAVYSLDGSDSLKETMQTSIA 298 >gi|226361138|ref|YP_002778916.1| porphobilinogen deaminase [Rhodococcus opacus B4] gi|226239623|dbj|BAH49971.1| porphobilinogen deaminase [Rhodococcus opacus B4] Length = 321 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 93/318 (29%), Positives = 149/318 (46%), Gaps = 18/318 (5%) Query: 1 ME---KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57 M + RIGTR S LA A R +L+ H+ ++ + TKGD+ E Sbjct: 1 MSAVGTRTLRIGTRGSELATTQAGTVRDALISA----GHDAELVIIKTKGDQSMES--VE 54 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 G G+FT E+ + L G +D AVHS KD+PT + I+A PRED RD ++ Sbjct: 55 KIGVGVFTAELREALADGRVDVAVHSYKDLPTARDERFTIAAIPPREDPRDALVARDGLV 114 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L +L S +GTS+ RR + L + ++ RG ++ RL K+ + + A++LA AG+ Sbjct: 115 LGELPPGSKVGTSAPRRTSQLRALGLGLDILPLRGNLQRRLGKVESGELDAVVLARAGLA 174 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + +I E L P+P QGA+ +E N ++ ++ ++ +V ERA L Sbjct: 175 RIGRLDLITESLEPVQMLPAPAQGALAVECLSANTALVAILSELDDPNSRAAVTAERALL 234 Query: 238 AELDGSCKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 AEL+ C + + A L G A DG G+ +A + Sbjct: 235 AELEAGCTAPVGAIAEVVESLDDDGRIFDELSVRGCAAAIDGSDVIRTGAVGSPENAEEL 294 Query: 289 GRDAAQYIRFISNKNVFN 306 GR A+ + + + + N Sbjct: 295 GRSVARELLELGARELMN 312 >gi|162449896|ref|YP_001612263.1| hydroxymethylbilane synthase [Sorangium cellulosum 'So ce 56'] gi|189028159|sp|A9FDP9|HEM3_SORC5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|161160478|emb|CAN91783.1| Hydroxymethylbilane synthase [Sorangium cellulosum 'So ce 56'] Length = 300 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 97/297 (32%), Positives = 158/297 (53%), Gaps = 6/297 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 + TR S LALA + SL +P ++ + + T GD+ +R+L +IGGKGLF Sbjct: 5 LTLATRRSALALAQSRAFARSLEAA--VPDLSLRELEVVTSGDKTQDRSLQDIGGKGLFI 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ D AVHS KD+P ++ L ++ RED RD ++ + L +L + Sbjct: 63 KELEEALLDRRADFAVHSIKDVPAEIAPALCLACIPAREDPRDALVTRSGALLAELPAGA 122 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR L R D+ + RG ++TRL K+ + A++LA AG+KRL E Sbjct: 123 RVGTSSLRRAVALREARPDLVIEPVRGNVDTRLRKVFDGVFDAVVLALAGLKRLGLEARA 182 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L+ E P+ GQGA+ IE + ++++ + +T V+ ERA +A ++GSC+ Sbjct: 183 TEVLSPEVSLPAIGQGALGIECRTADDSVRDVLGTLADAETTICVSAERAVMAAVEGSCR 242 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN----GNRCDAINIGRDAAQYIRF 298 + +A +A G L+ ++ DG R GN +A +G D ++ Sbjct: 243 TPVAAYAVRDGGALWLRALLAEPDGSRLRRAERRLSWPGNTREAERLGADLGAELKK 299 >gi|256783360|ref|ZP_05521791.1| porphobilinogen deaminase [Streptomyces lividans TK24] Length = 311 Score = 219 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 98/304 (32%), Positives = 146/304 (48%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT Sbjct: 7 IRIVSRDSPMALAQVERVRAELAALH--PGVRTEVVPVRTTGDKWLG-DLSQVEGKGAFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L+SGE D AVH KD+P L G +A+L R+D+RD + +L +L Sbjct: 64 KEVDAALLSGEADLAVHCVKDVPADRPLPAGTVFAAFLKRDDVRDALVHPDGLTLDELPD 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSS+RR A L + + FRG RL KL +A A+LLA +G++R+ + Sbjct: 124 GTRVGTSSVRRVAQLAATHPHLRCVPFRGNANRRLAKLAAGEADALLLAVSGLERIGRTD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI E+L+ E P G G + ++ + E V + T ER FL L G Sbjct: 184 VISEVLSTETMMPPIGAGILALQCREGDRALIEAVSALGDPRTHREATAERMFLHVLQGH 243 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG A L V DGK+ R D +G A + + Sbjct: 244 CNSPIAGHAQVDRSGELSLRACVFTPDGKVRLNAHEWAGRLDPATLGTSVAVALLRQGAR 303 Query: 303 NVFN 306 + + Sbjct: 304 EIID 307 >gi|313682001|ref|YP_004059739.1| porphobilinogen deaminase [Sulfuricurvum kujiense DSM 16994] gi|313154861|gb|ADR33539.1| porphobilinogen deaminase [Sulfuricurvum kujiense DSM 16994] Length = 313 Score = 219 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 98/306 (32%), Positives = 153/306 (50%), Gaps = 6/306 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR S LAL + +S + + + + + T GD+I + L +IGGKG Sbjct: 1 MKKLTIATRGSKLALWQSNHIKSVIES--QFSDVEVELKIIITSGDKILDVPLAKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ ++ GE AVHS KD+PT + +GL +SA RED+RD +S +K L Sbjct: 59 LFLKEIEESMLRGEAQMAVHSLKDVPTVMPQGLLLSAITVREDVRDAMLSEKYPDIKSLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GTSSLRR+ L++ R D+ + D RG ++TR+ KL + AI+LA AGI RL Sbjct: 119 QGAVVGTSSLRRRMQLVQQRPDLVIKDLRGNVDTRIRKLKEGEFDAIILAAAGINRLGFS 178 Query: 183 KVIKEILN--IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +++ +++ P+ GQGA+ IET N P E+ K + E++ ER F+ L Sbjct: 179 NLVQYFYPIALDEMLPAMGQGALGIETV-NEPWVLEIAKFLEDENSRIETTIERGFVDTL 237 Query: 241 DGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G C+ I A + + + DG + +G A+ + Sbjct: 238 QGGCQVPIGVSARVQPNGEVIVRSTLGMPDGSEVMGDEVVVAKGQTEGVGEAMAKRLIAQ 297 Query: 300 SNKNVF 305 + Sbjct: 298 GAMELL 303 >gi|21225618|ref|NP_631397.1| porphobilinogen deaminase [Streptomyces coelicolor A3(2)] gi|289767234|ref|ZP_06526612.1| porphobilinogen deaminase [Streptomyces lividans TK24] gi|11386841|sp|Q9KY00|HEM32_STRCO RecName: Full=Porphobilinogen deaminase 2; Short=PBG 2; AltName: Full=Hydroxymethylbilane synthase 2; Short=HMBS 2; AltName: Full=Pre-uroporphyrinogen synthase 2 gi|8246838|emb|CAB92889.1| porphobilinogen deaminase [Streptomyces coelicolor A3(2)] gi|289697433|gb|EFD64862.1| porphobilinogen deaminase [Streptomyces lividans TK24] Length = 313 Score = 219 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 98/304 (32%), Positives = 146/304 (48%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT Sbjct: 9 IRIVSRDSPMALAQVERVRAELAALH--PGVRTEVVPVRTTGDKWLG-DLSQVEGKGAFT 65 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L+SGE D AVH KD+P L G +A+L R+D+RD + +L +L Sbjct: 66 KEVDAALLSGEADLAVHCVKDVPADRPLPAGTVFAAFLKRDDVRDALVHPDGLTLDELPD 125 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSS+RR A L + + FRG RL KL +A A+LLA +G++R+ + Sbjct: 126 GTRVGTSSVRRVAQLAATHPHLRCVPFRGNANRRLAKLAAGEADALLLAVSGLERIGRTD 185 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI E+L+ E P G G + ++ + E V + T ER FL L G Sbjct: 186 VISEVLSTETMMPPIGAGILALQCREGDRALIEAVSALGDPRTHREATAERMFLHVLQGH 245 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG A L V DGK+ R D +G A + + Sbjct: 246 CNSPIAGHAQVDRSGELSLRACVFTPDGKVRLNAHEWAGRLDPATLGTSVAVALLRQGAR 305 Query: 303 NVFN 306 + + Sbjct: 306 EIID 309 >gi|296823866|ref|XP_002850512.1| porphobilinogen deaminase [Arthroderma otae CBS 113480] gi|238838066|gb|EEQ27728.1| porphobilinogen deaminase [Arthroderma otae CBS 113480] Length = 334 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 100/318 (31%), Positives = 154/318 (48%), Gaps = 17/318 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +P RIGTR S LA+ A + L + P H I L T GD+ N +L G K Sbjct: 8 NRPLRIGTRRSNLAIIQAKAIQDQLQKL--APEHTFEIEALHTIGDKDQNSSLYNFGAKN 65 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLK 119 L+T E+E+ L SG++D VH KDMPTKL ++A R+D RD I SL+ Sbjct: 66 LWTTELEELLTSGKLDVVVHCLKDMPTKLPDSCDLAAIPLRDDPRDALIVKVGLPYTSLQ 125 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIK 177 L +V+GTSS+RR A L R ++ I+ RG +ETRL KL++ ++ I+++ G++ Sbjct: 126 SLPEGAVVGTSSVRRSAQLCRLFPNLRFINIRGNVETRLAKLDDPQSEYTCIIMSACGLE 185 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R+ I + + +D + GQGAI +E + K L+ + + + ERA Sbjct: 186 RVGLGYRINQRIGSKDGGILHAVGQGAIGLEVRKGDTKILHLLDQLVDHKSSLACLAERA 245 Query: 236 FLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNG---NRCDAIN 287 + L+G C I G TL GIV++ DG E S + + +A Sbjct: 246 LMRTLEGGCSVPIGVETEWIGDSEVYLTLRIRGIVISLDGSRSVEDSIDATVSTKDEATA 305 Query: 288 IGRDAAQYIRFISNKNVF 305 +G++ A + + Sbjct: 306 LGQELAARLLEAGAATIL 323 >gi|154245106|ref|YP_001416064.1| porphobilinogen deaminase [Xanthobacter autotrophicus Py2] gi|154159191|gb|ABS66407.1| porphobilinogen deaminase [Xanthobacter autotrophicus Py2] Length = 317 Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats. Identities = 121/292 (41%), Positives = 171/292 (58%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLAL A +++L + I + + T GD+I +R L+E GGKGLFT Sbjct: 16 LRIGTRGSPLALWQAHAVQAALAVALGVEKEAIAVEVIKTSGDQIQDRALSEAGGKGLFT 75 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G +D AVHSAKD+ T L GL ++ YLPR D+RD I + +L DL + Sbjct: 76 KEIEEALLDGRVDLAVHSAKDVATVLPDGLHLAGYLPRADVRDALILKSGAALADLPAGA 135 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT+SLRR+A L R R D+ V RG + TRL K+ + A LLA AG+ RL + Sbjct: 136 KVGTASLRREAQLRRIRPDLKVELLRGNVHTRLAKVKDGDFDATLLALAGLTRLGMAQAA 195 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +L +DF P+ GQGA+ IE + +P + I DT ++ ERAFLA LDGSC+ Sbjct: 196 SCVLATDDFLPAVGQGAVAIECRIADPDTNAAIAAIACRDTGIALEAERAFLAALDGSCR 255 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + IAG A +G ++ G+VL+ DG E++ DA +G + +R Sbjct: 256 TPIAGLATVEGESVRLRGLVLSPDGSDAAEIAELAPIADAARLGAECGARLR 307 >gi|120401860|ref|YP_951689.1| porphobilinogen deaminase [Mycobacterium vanbaalenii PYR-1] gi|158513128|sp|A1T3D3|HEM3_MYCVP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|119954678|gb|ABM11683.1| hydroxymethylbilane synthase [Mycobacterium vanbaalenii PYR-1] Length = 312 Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats. Identities = 91/310 (29%), Positives = 149/310 (48%), Gaps = 14/310 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H+ ++ +ST+GD+ + + EIG G+FT Sbjct: 2 IRIGTRGSLLATTQAGTVRDALIAA----GHDAELVIVSTEGDQRADAPIAEIG-VGVFT 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + G +D AVHS KD+PT I+A RED RD ++ L +L S Sbjct: 57 AALREAIADGLVDAAVHSYKDLPTAPDPRFMIAATPVREDARDALVARDGLVLGELPAGS 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS RR A L + + RG ++TRLN++++ + AI++A AG+ R+ + + Sbjct: 117 VIGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGELDAIVVARAGLARIGRLDAV 176 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ +E + +++ ++ DT ++ ER LAEL+ C Sbjct: 177 TEALEPVQMLPAPAQGALAVECRAGDTALAQVLSQLDDADTRAAITAERTLLAELEAGCS 236 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V DG + G A +G A+ + Sbjct: 237 APVGAIAEVVESIDEDGRVFEELSLRGCVATLDGSDVIRATGIGTPDRARELGLSVAEEL 296 Query: 297 RFISNKNVFN 306 + +++ + Sbjct: 297 FELGARDLLD 306 >gi|194212756|ref|XP_001501130.2| PREDICTED: similar to hydroxymethylbilane synthase [Equus caballus] Length = 348 Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats. Identities = 104/338 (30%), Positives = 153/338 (45%), Gaps = 48/338 (14%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + K R+GTR S LA + L ++ P II +ST GD+I + L++IG K Sbjct: 17 KMKVIRVGTRKSQLARIQTDSVVAMLKALY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIK 177 + L SV+GTSSLRR A L R + + RG + TRL KL+ + AI+LA AG++ Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLDISPXRGNLNTRLRKLDELQEFSAIILAAAGLQ 194 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 195 RMGWQNRM-------------GQGALGVEVRAKDQDILDLVGVLHDPETLLCCLAERAFL 241 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284 L+G C +A K LY G V + DG + + +G + Sbjct: 242 RHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSMQETMQATIHVPAQHEDGPEDNPQ 301 Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 302 LVGITARNIPREAQLAAENLGISLANLLLSKGAKNILD 339 >gi|312141093|ref|YP_004008429.1| hydroxymethylbilane synthase hemc [Rhodococcus equi 103S] gi|325674097|ref|ZP_08153787.1| hydroxymethylbilane synthase [Rhodococcus equi ATCC 33707] gi|311890432|emb|CBH49750.1| hydroxymethylbilane synthase HemC [Rhodococcus equi 103S] gi|325555362|gb|EGD25034.1| hydroxymethylbilane synthase [Rhodococcus equi ATCC 33707] Length = 334 Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats. Identities = 99/310 (31%), Positives = 152/310 (49%), Gaps = 15/310 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIGTR S LA A R +L+ H ++ + TKGD +T + IG G+ Sbjct: 20 RTLRIGTRGSLLATTQAGHVRDALIAA----GHPAELVIIKTKGD-VTAGPVQRIG-VGV 73 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F E+ + L++GE+D AVHS KD+PT L I+A RED RD ++ L +L Sbjct: 74 FVAELREALVAGEVDVAVHSYKDLPTAQPDDLTIAAVPTREDPRDALVARDGLVLGELPP 133 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S IGTS+ RR+A L + + RG I+TRL K+ + + AI++A AG+ R+ + + Sbjct: 134 GSRIGTSAPRRRAQLRAMGLGLEIEPLRGNIDTRLGKVASGELDAIVIARAGLSRIGRTE 193 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I E L P+P QGA+ +E +NP ++ ++ T +V ERA LAEL+ Sbjct: 194 RITETLEPVQMLPAPSQGALAVECRSDNPDLIAILGELDDHATRAAVVAERALLAELEAG 253 Query: 244 CKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 C + + A L G A DG S G+ A +GR A+ Sbjct: 254 CTAPVGAIAEVVESLDDDGRVFEELSIRGCAAAIDGSDVIRASLVGSPERADELGRAVAR 313 Query: 295 YIRFISNKNV 304 + + +++ Sbjct: 314 ELLDLGARDL 323 >gi|87200799|ref|YP_498056.1| porphobilinogen deaminase [Novosphingobium aromaticivorans DSM 12444] gi|87136480|gb|ABD27222.1| porphobilinogen deaminase [Novosphingobium aromaticivorans DSM 12444] Length = 312 Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 161/303 (53%), Gaps = 6/303 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++P ++GTR SPLA+A A E R+ L H + ++P++ GD+I +R L +IGGK Sbjct: 7 QRPLKLGTRRSPLAMAQAEEARARLCAAHGWAESQVELVPVTASGDKIQDRPLADIGGKA 66 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 L+T+E++ L+SGEID AVHS KD+ T + I+A LPR D+RDV I A S+ + Sbjct: 67 LWTKELDAWLVSGEIDFAVHSMKDVETIRPENFAIAAVLPRADVRDVLI--GAASIHAIP 124 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTS+ RR A +L R D++V+ FRG + TRL KL +A LLA AG+ RL + Sbjct: 125 PGARVGTSAPRRAAQMLHARPDLTVVSFRGNVATRLAKLQAGEADVTLLAAAGLGRLGET 184 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V + E + P+P QGAI IE + + I+ + T ++ ERA L L G Sbjct: 185 GVGHPLSEYE-WLPAPAQGAIGIECLASRADLCAWLGAIDDKPTHHAIRAERALLLALGG 243 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD-AAQYIRFISN 301 +C S IA S+L + + DG E D + G A + + Sbjct: 244 NCHSPIAVLTTHHESSLTLRAALFSPDGAERVEAHETFAAGD--DAGPAHLAHRLLGEAP 301 Query: 302 KNV 304 + Sbjct: 302 DAI 304 >gi|87117972|gb|ABD20293.1| HemC [Shigella boydii] Length = 272 Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats. Identities = 97/267 (36%), Positives = 145/267 (54%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T GD I + L ++ GKGLF +E++ L+ D AVHS KD+P + + Sbjct: 6 PGLVVELVPMVTPGDVILDTPLAKVCGKGLFVKELDVALLENRADIAVHSMKDVPVEFPQ 65 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+T SL L S++GTSSLRR+ L R D+ + RG Sbjct: 66 GLGLVTICEREDPRDAFVSNTYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 125 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL+KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +N+ + Sbjct: 126 VGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEVSLPAVGQGAVGIECRLNDTR 185 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 + L+ +NH +T V ERA L+G C+ I +A ++ +V A DG Sbjct: 186 TRALLAALNHNETALRVTAERAMNTRLEGGCQVPIGSYAELVDGEIWLLALVGAPDGSQI 245 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFIS 300 R G+ DA + A+ + Sbjct: 246 IRGERRGSPQDAEQMSVSLAEELLNNG 272 >gi|154505786|ref|ZP_02042524.1| hypothetical protein RUMGNA_03326 [Ruminococcus gnavus ATCC 29149] gi|153793804|gb|EDN76224.1| hypothetical protein RUMGNA_03326 [Ruminococcus gnavus ATCC 29149] Length = 295 Score = 218 bits (555), Expect = 8e-55, Method: Composition-based stats. Identities = 102/301 (33%), Positives = 155/301 (51%), Gaps = 6/301 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K RIG+R S LA+ + + P + I+ + T GDRI +R+L +IGGK Sbjct: 1 MKTVIRIGSRESRLAVTQTEIIKGQIEA--HFPHIRVEIVTMKTTGDRILDRSLEQIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+++ L G +D +VHS KDMP + + L I AY RED RDV I Q + Sbjct: 59 GLFVKELDQALRKGRVDLSVHSLKDMPMDIPEDLPILAYSKREDPRDVLIFR--QGQTES 116 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +IGTSS RR+ L R D RG ++TRL KL A +LA AG+KRL Sbjct: 117 ISGGMIGTSSKRRRLQLERLYPDCHFQGIRGNVQTRLRKLEEEGFCATVLAAAGLKRLGM 176 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I + E+ P+ GQG + ++ + QEL++V+N + + ERAF+ L+ Sbjct: 177 DSCIGRYFSCEEMIPAAGQGILAVQARAG--EYQELLEVLNDPRSEAAAKAERAFVKVLN 234 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C S +A +A +GS + G+ + + +GN+ +A +G A ++ Sbjct: 235 GGCTSPVAAYAEIRGSKCHITGLYWRESDENWFVEKTSGNKKEAELLGETLAHNMQKKYG 294 Query: 302 K 302 K Sbjct: 295 K 295 >gi|289615845|emb|CBI57434.1| unnamed protein product [Sordaria macrospora] Length = 338 Score = 218 bits (555), Expect = 8e-55, Method: Composition-based stats. Identities = 99/320 (30%), Positives = 153/320 (47%), Gaps = 18/320 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K+ IGTR S LAL ++L H P + + L+T GD+ +L +G K Sbjct: 5 QKQTVHIGTRRSALALRQVDLVIAALQPHH--PNVHFQVHALATLGDKNQTASLPSLG-K 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT------- 114 GL+T E+E KL + E+D VH KD+PT L +G +I RED RDV + Sbjct: 62 GLWTNELEAKLFNNEVDFIVHCLKDVPTTLPEGGKIGVVTEREDPRDVVVMKKKWAEQGK 121 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 + L DL +++GTSS+RR A L R + D RG IETR+ K + I+LA A Sbjct: 122 YKVLADLPEGAIVGTSSVRRAAQLRRQYPGLVFKDVRGNIETRMRKCDEEDYDCIILAAA 181 Query: 175 GIKRLKKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 G+ R+ ++ I + L+ + GQGA+ +E + K E++K + HE T + Sbjct: 182 GLLRMGYDERIAQWLDSTTEGGGMLHAVGQGALAMEIREGDEKTLEIIKPLCHEKTMVAT 241 Query: 231 NCERAFLAELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFH---EVSRNGNRCDAI 286 ERA + L+G C I + + L V++ DGK V +A Sbjct: 242 FAERAVMRSLEGGCSVPIGVETKWVEDDKLQLKATVVSLDGKESVDGQSVEVVKTTEEAE 301 Query: 287 NIGRDAAQYIRFISNKNVFN 306 +GR A+ + + + + Sbjct: 302 EMGRKLAEDLAKRGAQKILD 321 >gi|326201521|ref|ZP_08191392.1| porphobilinogen deaminase [Clostridium papyrosolvens DSM 2782] gi|325988121|gb|EGD48946.1| porphobilinogen deaminase [Clostridium papyrosolvens DSM 2782] Length = 297 Score = 218 bits (555), Expect = 8e-55, Method: Composition-based stats. Identities = 88/294 (29%), Positives = 153/294 (52%), Gaps = 7/294 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RIG+R S LA+ + +++ + P + +I + T GD+I ++TL +IGGKG Sbjct: 5 MKKIRIGSRDSKLAIIQSEMVMAAIREF--DPDIELELITMKTTGDKILDKTLDKIGGKG 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E++ L + E+D VHS KDMP + L + A RED RD F+ + + Sbjct: 63 LFVKELDYALYNNEVDITVHSYKDMPLEDNPELPVVAVSKREDPRDAFVLPQGE---NTE 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IG+SS RR+ L + RG ++TRL KL++ + AI+LA AGIKRL E Sbjct: 120 NNEPIGSSSQRRQLQLKALFPNHKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLE 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I ++++ P+ QG I ++ + + +K+ + E++ + ER F+ E++G Sbjct: 180 SRISRYFSVDEILPAASQGIIAVQGRAG--ENFDFLKLFHSEESLCISHAERTFVREMNG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C + IA +A S + G+ + +G+R + + +G + + + Sbjct: 238 GCSTPIAAYATIVESEIILKGLYHNEATGESKKECVSGSRQNPVELGYELVKKM 291 >gi|285019346|ref|YP_003377057.1| hydroxymethylbilane synthase [Xanthomonas albilineans GPE PC73] gi|283474564|emb|CBA17065.1| probable hydroxymethylbilane synthase protein [Xanthomonas albilineans] Length = 302 Score = 218 bits (555), Expect = 8e-55, Method: Composition-based stats. Identities = 114/289 (39%), Positives = 161/289 (55%), Gaps = 4/289 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RI TR SPLAL + + L H P ++++P+ST+GD + +R+L IGGKG Sbjct: 1 MKILRIATRKSPLALWQSEYVAACLRRAH--PQLEVLLVPMSTRGDEVLDRSLAAIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E ++ G+ DCAVHS KD+P +L + +SA LPR D D IS+ +L L Sbjct: 59 LFLKELELAMLRGDADCAVHSLKDVPMELERPFVLSAILPRADSADALISNLYAALDALP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 L + +GTSSLRR+A L R D+ ++D RG + TRL KL+N AI+LA AG++RL E Sbjct: 119 LGARVGTSSLRRQAQLRARRPDLQLLDLRGNVNTRLAKLDNGDYDAIVLACAGLQRLGLE 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I + L D+ P+P QGAI +E + A L V++ T V ERA L G Sbjct: 179 RRITQRLQAPDWLPAPAQGAIAVECRQDMAAACALFAVLDDVATRTCVEAERAMNRALHG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLAS-DGKIFHEVSRNGNRCDAINIGR 290 SC +A FA +G L G+V DG + D +G+ Sbjct: 239 SCHVPVAAFAQWRGEDLLLQGLVGDVADG-RLVRAQIQRSAQDPQALGQ 286 >gi|296123437|ref|YP_003631215.1| porphobilinogen deaminase [Planctomyces limnophilus DSM 3776] gi|296015777|gb|ADG69016.1| porphobilinogen deaminase [Planctomyces limnophilus DSM 3776] Length = 318 Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 96/316 (30%), Positives = 144/316 (45%), Gaps = 18/316 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LAL A SL + P + ++ ++T GDR+ L + GG+G+FT Sbjct: 4 LRIATRASQLALWQANFVADSLRSL--DPELTVELVHVTTTGDRVQGEPLRQFGGQGVFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL---- 121 E++ L+ G D AVHS KD+PT GL+++A R + D + T S Sbjct: 62 REVQAALLEGRADIAVHSLKDLPTVPTAGLELAAVPARAPVADALLLPTGHSGPASLAML 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGT S RR+A LLR R D+ + RG ++TR+ KL+ + ++LA AG+ RL Sbjct: 122 PRGARIGTGSPRRQAQLLRIRPDLVCSEVRGNLDTRIRKLDAGEYEGLILAVAGLSRLGW 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I IL P+ GQGA+ +E + V + T +V+ ERA L L+ Sbjct: 182 SDRISLILAPPTMFPAAGQGALGLECRHGDEATIRWVSQLEDRQTRLAVDAERAVLRTLE 241 Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEV--SRNGNRCD---------AINIG 289 C + + +A K TL+ I++A DG S G A +G Sbjct: 242 AGCHAPVGTWASWKSPETLHLEAILIAPDGSETLAAASSMQGPLSQYGSGNALDAAHELG 301 Query: 290 RDAAQYIRFISNKNVF 305 + A + Sbjct: 302 ANVAHLLLKQGASRYL 317 >gi|91205161|ref|YP_537516.1| porphobilinogen deaminase [Rickettsia bellii RML369-C] gi|157827501|ref|YP_001496565.1| porphobilinogen deaminase [Rickettsia bellii OSU 85-389] gi|122990935|sp|Q1RJN7|HEM3_RICBR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166217782|sp|A8GXC8|HEM3_RICB8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|91068705|gb|ABE04427.1| Porphobilinogen deaminase [Rickettsia bellii RML369-C] gi|157802805|gb|ABV79528.1| porphobilinogen deaminase [Rickettsia bellii OSU 85-389] Length = 300 Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 109/296 (36%), Positives = 161/296 (54%), Gaps = 4/296 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR S LAL + P N I+ ++T GD I N+ L +IGGK L Sbjct: 3 NSIRIGTRKSKLALTQTNLVIEQIKQ--HFPNINCEIVEITTSGDLIQNKPLYDIGGKAL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L++ ++D AVHS KD+P + K L I A L RED RDVF+ T +S+++L Sbjct: 61 FLKEIEQALLNKKVDLAVHSLKDVPGIIPKDLSIEAVLEREDSRDVFVCLTHKSIEELPK 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KE 182 ++VIGTSS+RRK + R R D+ +I FRG +++R+NKL N + A +LAYAG+KRL Sbjct: 121 NAVIGTSSVRRKLCVQRMRPDLEIIVFRGNVDSRINKLINKEVDATILAYAGLKRLNAFN 180 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ P GQG I IE ++ E+ K INH T++ + ERA L LD Sbjct: 181 PEYCHLIEHSQMLPCIGQGVIAIEIRKDDHDMIEICKQINHLPTFELIKPERALLEYLDA 240 Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 +C++ I ++ Y + ++ DG + N + G AA+ + Sbjct: 241 NCRTPIGAYSKYLDNGDIQTDFMLGNLDGSKIAFHTEISNPKTSKESGIKAAKVML 296 >gi|61653263|gb|AAX48216.1| porphobilinogen deaminase [uncultured proteobacterium DelRiverFos06H03] Length = 314 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 103/311 (33%), Positives = 150/311 (48%), Gaps = 15/311 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + I TR S LAL A + L H + ++ ++T GD+I ++ L++IGG Sbjct: 1 MTSQ-LIIATRESRLALWQANHVKELLE----CQGHQVELLGMTTLGDQILDQPLSQIGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L G AVHS KD+P L +G +++ L RED RD ++S +SL Sbjct: 56 KGLFIKELEVALADGSAHLAVHSLKDVPMDLPEGFELACILEREDPRDAWVSPRFESLDS 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR LL R D+ + RG ++TRL KL+ + I+LA AG+KRL Sbjct: 116 LPPGAVVGTSSLRRTVLLKALRPDLKIEPLRGNLDTRLRKLDEGQYAGIVLASAGLKRLG 175 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+ + P+ GQGAI IE P L+ +NH T V ER + Sbjct: 176 LKDRIRYSFPLNTMTPAAGQGAIGIEICDKRPDLAHLLSNLNHLPTAVQVYAERGVSRTM 235 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI----------FHEVSRNGNRCDAINIGR 290 GSC +A A + L + I K +S + A +G+ Sbjct: 236 GGSCSMPLAAHATLETGLLSIHAIWGDPQLKATSLIHAHQQCTLNMSASDVLSQATELGK 295 Query: 291 DAAQYIRFISN 301 AQ + Sbjct: 296 QVAQKLIAKGA 306 >gi|257124843|ref|YP_003162957.1| porphobilinogen deaminase [Leptotrichia buccalis C-1013-b] gi|257048782|gb|ACV37966.1| porphobilinogen deaminase [Leptotrichia buccalis C-1013-b] Length = 322 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 114/318 (35%), Positives = 168/318 (52%), Gaps = 22/318 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVH----------------KIPPHNIVIIPLS 44 M+ IGTR S LALA A + + L+ + K P I + + Sbjct: 1 MKSNKIIIGTRGSILALAQAEKVKEMLIKKYDELRENENFCEIEGFDKKNPLEIELKVIV 60 Query: 45 TKGDRITNRTLTEIGG---KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYL 101 TKGD+ R T+I G K LF +EIEK+++ +ID AVHS KDMP +GL + + Sbjct: 61 TKGDKDL-RDFTKIKGTTQKDLFVKEIEKEMLENKIDLAVHSLKDMPQNTPEGLLNACFP 119 Query: 102 PREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 RED RDV +S + LK+L +SVIGT S+RR+ LL R+D+ + RG I TRL KL Sbjct: 120 MREDNRDVLVSKNGKKLKELDENSVIGTGSIRREKELLNLRNDVKIKAIRGNIHTRLKKL 179 Query: 162 NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221 ++ + AI+LA AG+KR+ E I E + + F P+PGQG +CI+ N+ K + L+K+I Sbjct: 180 DDGEYDAIVLAAAGLKRVGLENRITEYFDKDSFMPAPGQGILCIQCRENDNKIRHLLKII 239 Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281 N ++ ER F DG C + I + +G+TL G+ +G + GN Sbjct: 240 NDDEVTIMCKAEREFSKIFDGGCHTPIGCSSVIEGNTLKLKGM-FNDNGIRIFK-EVEGN 297 Query: 282 RCDAINIGRDAAQYIRFI 299 R + + A+ I+ Sbjct: 298 RENPKETAQKLAEEIKKE 315 >gi|17547076|ref|NP_520478.1| porphobilinogen deaminase [Ralstonia solanacearum GMI1000] gi|24211753|sp|Q8XWW3|HEM3_RALSO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|17429377|emb|CAD16064.1| probable porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase) (hmbs) (pre-uroporphyrinogen synthase) protein [Ralstonia solanacearum GMI1000] Length = 334 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 163/305 (53%), Gaps = 6/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF Sbjct: 21 KLVIASRESRLAMWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLF 78 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G +SA L RED RD F+S+ L L Sbjct: 79 VKELEVALAEGRADLAVHSLKDVPMELPPGFVLSAILEREDPRDAFVSNDYADLAALPAG 138 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A L + + RG ++TRL+KL+ AI+LA AG+KRL + Sbjct: 139 AVVGTSSLRREASLRARFPHLVIQPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLSER 198 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ ++ E P+ GQGA+ IE+ V+ Q + ++H T +V ERA +L GSC Sbjct: 199 IRAVIAPETSLPAAGQGALGIESRVDRHDVQAWLAPLHHAPTALAVTAERAVSRQLGGSC 258 Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDGKIFH---EVSRNGNRCDAINIGRDAAQYIRFIS 300 + +A FA L V + DG+ + +A +G AQ + Sbjct: 259 QVPLAAFAQWTDAGALRLRAFVASPDGRRKLAAEAEATPATPAEAEALGARVAQQMLDGG 318 Query: 301 NKNVF 305 ++ Sbjct: 319 AHDIL 323 >gi|149240385|ref|XP_001526068.1| porphobilinogen deaminase [Lodderomyces elongisporus NRRL YB-4239] gi|146450191|gb|EDK44447.1| porphobilinogen deaminase [Lodderomyces elongisporus NRRL YB-4239] Length = 347 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 93/317 (29%), Positives = 153/317 (48%), Gaps = 20/317 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IG R S LA+ + + ++ ++ P I+ LST GD++ + L GGK L+T Sbjct: 20 LQIGGRKSKLAVVQSQLVQQAIQKIY--PDLPSSILALSTLGDKVQTQPLYTFGGKSLWT 77 Query: 66 EEIEKKLISGEID------CAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQ 116 +E+E L+ G D VHS KDMPT L + ++ RED RD + + Sbjct: 78 KELEILLMDGIDDEFPRLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAIVMKQGSPYK 137 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYA 174 L+DL S++GTSS+RR + L++ + RG I+TRLNKL++ N ++LA A Sbjct: 138 YLRDLPAGSIVGTSSIRRSSQLIKNYPHLKFESVRGNIQTRLNKLDDPSNPYCCLILASA 197 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G+ RL I +++ + GQGA+ IE ++ + +E++K I ER Sbjct: 198 GLIRLGLGGRITSC--LDEVYYAVGQGALGIEIRKDDHQVKEILKKIEDPVATICCLAER 255 Query: 235 AFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNG---NRCDAINIG 289 + + L+G C + + ST L GI+++ DG E +R D +G Sbjct: 256 SLMRYLEGGCSVPLGVHSEYNESTKKLTLKGIIVSPDGSKSIEDEVTKTIESREDCEAVG 315 Query: 290 RDAAQYIRFISNKNVFN 306 D ++ K + + Sbjct: 316 IDLGDRLKAKGAKEILD 332 >gi|297156263|gb|ADI05975.1| porphobilinogen deaminase [Streptomyces bingchenggensis BCW-1] Length = 315 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 98/304 (32%), Positives = 147/304 (48%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L + P ++P++T GDR L+ +GGKG FT Sbjct: 11 IRIVSRSSPMALAQVERVRAELAALR--PGIRTEVVPVTTSGDRWMG-DLSALGGKGAFT 67 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +AYL R+DIRD + +L L Sbjct: 68 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTVFAAYLKRDDIRDAVVHPGGLTLDQLPE 127 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSS+RR A L + + RG RL KL+ + A+LLA +G++R+ + Sbjct: 128 GARIGTSSVRRIAQLAVSHPHLECVPMRGNANRRLEKLDAGECDALLLAVSGLERIGRTD 187 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I EIL +E P G G + ++ ++ + V + D W + ER L L G Sbjct: 188 RISEILPVETMCPPIGAGVLALQCREDDTATIDAVSGLGDADAWKEITAERMLLHVLQGH 247 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG+A + L V + DGK + D +G A + + Sbjct: 248 CNSPIAGYARAERDGRLSLRARVFSPDGKTVLDAHEWAGPLDPATLGTSVAVALLRQGAR 307 Query: 303 NVFN 306 V + Sbjct: 308 EVID 311 >gi|297172436|gb|ADI23410.1| porphobilinogen deaminase [uncultured gamma proteobacterium HF0770_28K04] Length = 311 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 158/304 (51%), Gaps = 5/304 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 F +GTR S L+LA S L + P I ++T GD T R L I KG+F Sbjct: 2 TFLVGTRGSKLSLAQTNWVISELQKQN--PGSEFEIKTITTNGDTDT-RALFTIDQKGIF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EI+K + +ID AVHS KD+P+ + K L I+ RE DV I+ +LK + L+ Sbjct: 59 EKEIDKAVAEKQIDFAVHSLKDVPSDISKSLTIACVPKRESANDVLITKDGFNLKTIPLN 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR + R R D+ V RG IETR+NK+ + K AI+LA AGI RL + V Sbjct: 119 AVVGTSSLRRAVQVSRIRPDVVVKPVRGNIETRINKVIDGKFDAIILAEAGISRLGLD-V 177 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 +L+ +DFPPSPGQGA+ I ++ K ++K I + + + ERA ++ C Sbjct: 178 KHSVLSTKDFPPSPGQGALAIVCRADDDKTISMLKKIEDKKSRIEIESERALSDYVESGC 237 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + + A L + DGK + + G+ N+G+ + ++ I + Sbjct: 238 RFPVGALAIANSGMLKLTVTAYSVDGKKSITIEKTGDIDKPRNLGQGVGEELQKIGIAEI 297 Query: 305 -FNF 307 N+ Sbjct: 298 ASNW 301 >gi|302549045|ref|ZP_07301387.1| porphobilinogen deaminase [Streptomyces viridochromogenes DSM 40736] gi|302466663|gb|EFL29756.1| porphobilinogen deaminase [Streptomyces viridochromogenes DSM 40736] Length = 311 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 103/304 (33%), Positives = 150/304 (49%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L H P ++P+ T GD+ L+++ GKG FT Sbjct: 7 IRIVSRDSPMALAQVERVRTELAAAH--PGVRTEVVPVKTTGDKWMG-DLSQVEGKGAFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +A+L R+DIRD I +L +L Sbjct: 64 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTVFAAFLERDDIRDALIHPDGLTLDELPA 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSS+RR A L + + FRG RL KL +A A+LLA AG++R+ ++ Sbjct: 124 GTRIGTSSVRRVAQLAATHPHLECVPFRGNANRRLAKLAAKEADALLLAVAGLERIGRQD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI EIL+ E P G G + ++ ++ + V + DT+ ER FL L G Sbjct: 184 VISEILSTETMMPPIGAGVLALQCREDDADLIDAVSGLGDPDTYRETMAERMFLHVLQGH 243 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAGFA+ L V DGK R D +G A + + Sbjct: 244 CNSPIAGFAHVDRSGELSLRACVFTPDGKTRLNAHEWAGRLDPATLGTSVAVALLRQGAR 303 Query: 303 NVFN 306 + + Sbjct: 304 EIID 307 >gi|299066045|emb|CBJ37226.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Ralstonia solanacearum CMR15] Length = 334 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 161/305 (52%), Gaps = 6/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF Sbjct: 21 KLVIASRESRLAMWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLF 78 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G +SA L RED RD F+S+ L L Sbjct: 79 VKELEVALAEGRADLAVHSLKDVPMELPPGFALSAILEREDPRDAFVSNDYADLAALPAG 138 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A L + + RG ++TRL+KL+ AI+LA AG+KRL Sbjct: 139 AVVGTSSLRREASLRARFPHLVIQPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLSAR 198 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ ++ E P+ GQGA+ IE+ V+ Q + ++H T +V ERA +L GSC Sbjct: 199 IRAVIAPETSLPAAGQGALGIESRVDRHDVQAWLAPLHHVPTTLAVTAERAVSRQLGGSC 258 Query: 245 KSAIAGFAYCKG-STLYFYGIVLASDGKIFH---EVSRNGNRCDAINIGRDAAQYIRFIS 300 + +A FA L V + DG + +A +G AQ + Sbjct: 259 QVPLAAFAQWTDAGALRLRAFVASPDGSRKLAAEAEATPATPAEAEALGARVAQQMLDGG 318 Query: 301 NKNVF 305 ++ Sbjct: 319 AHDIL 323 >gi|95931480|ref|ZP_01314180.1| porphobilinogen deaminase [Desulfuromonas acetoxidans DSM 684] gi|95132465|gb|EAT14164.1| porphobilinogen deaminase [Desulfuromonas acetoxidans DSM 684] Length = 313 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 108/309 (34%), Positives = 170/309 (55%), Gaps = 9/309 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +IGTR S LAL A+ L D + I+ + T+GD++ + ++ +IG Sbjct: 1 MSTK-IKIGTRRSKLALWQAYYVEQLLQDA----GMDTEIVEIDTRGDQVLDVSIAKIGS 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL-K 119 KG+FTEE+E +L SG+ID AVHSAKDM ++L +G +I A+ RE + DV +S Sbjct: 56 KGVFTEELEDQLRSGDIDIAVHSAKDMQSELPEGFEIIAFTIREKVNDVVVSRDKSIRLG 115 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 D + IG+SS+RR+A+L + +++I+ RG ++TR+ K+++ + AILLAYAG+ R+ Sbjct: 116 DTSRPLTIGSSSVRRRAILKAYYPHLNIIEMRGNLQTRIGKMDDGQCDAILLAYAGVNRM 175 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIE--THVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + +I E L +E F P GQG++ IE +++ K + + K +NH DT + ERAFL Sbjct: 176 EYNDLIVETLPLEQFIPPVGQGSVAIESAINLDAKKRETIRKAVNHPDTEFRLLAERAFL 235 Query: 238 AELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L G C A + L G +++ DG+ + G R DA +G A Sbjct: 236 KTLKGGCSIPAFCMAELEGDDQLKVTGGMISLDGQTLIKNVLTGARSDAEQLGDQMANLT 295 Query: 297 RFISNKNVF 305 + Sbjct: 296 LEQGGAQIL 304 >gi|296327549|ref|ZP_06870095.1| hydroxymethylbilane synthase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296155375|gb|EFG96146.1| hydroxymethylbilane synthase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 298 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 108/300 (36%), Positives = 144/300 (48%), Gaps = 7/300 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT--LTEIG 59 KK IG+R S LALA A + L P + I + T GD+ ++I Sbjct: 1 MKKNIIIGSRGSILALAQANLVKDRLQ--GNYPNLSFEIKEIVTSGDKDLKSNWENSDIS 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 K FT+EIE+KL+ GEID AVHS KDMP KGL A RED RDV +S L Sbjct: 59 LKSFFTKEIEQKLLDGEIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLV 117 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 118 TLPQGAKVGTSSLRRAMNLKAVRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRT 177 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I E LN E FPP+P QG + I+ N+ + ++ +K I++E V ER F Sbjct: 178 GLADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKKFLKSIHNETVAKIVEIEREFSKI 237 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DG C + + ++ G + F V + +GK + I A+ I+ Sbjct: 238 FDGGCHTPMGCYSQINGDKIKFTA-VYSDEGKQ-IRAVVEDDLAKGKEIAHMVAEEIKNK 295 >gi|329114337|ref|ZP_08243099.1| Porphobilinogen deaminase [Acetobacter pomorum DM001] gi|326696413|gb|EGE48092.1| Porphobilinogen deaminase [Acetobacter pomorum DM001] Length = 406 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 108/317 (34%), Positives = 162/317 (51%), Gaps = 15/317 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGGKG 62 P R+GTR SPLAL ++L + ++T GD++ NR L EIGGKG Sbjct: 88 PLRVGTRGSPLALVQTRAFLTTLTRFCPVLRDMGAFQEHQINTTGDQVQNRRLAEIGGKG 147 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL- 121 LF +EI + L G ID AVHS KD+ T L GL ++ L RED RD I + D Sbjct: 148 LFAKEIHEALADGRIDFAVHSLKDLETTLPPGLVLACTLKREDARDALILSPGLAQSDPD 207 Query: 122 ------ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 +++G +S+RR+A +L R D+ RG ++TRL+KL ++ A LLA AG Sbjct: 208 DPYSALPEGALVGCASVRRQAQMLHVRPDLQFGLLRGNVQTRLDKLAAHQCQATLLALAG 267 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 +KRL + +L+ P+ GQG + + ++ + +EL+ I + ER+ Sbjct: 268 LKRLGMAERASIVLDPTVMVPAAGQGIVGVTVREDDVELRELLSAIEDYEARAVATAERS 327 Query: 236 FLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 LAELDGSC++ I G+A K L+ G+V DG + S G DA +G Sbjct: 328 LLAELDGSCRTPIGGYAQLLPAEEGKDPKLHLTGLVAREDGSFLLKRSITGMPEDAARLG 387 Query: 290 RDAAQYIRFISNKNVFN 306 ++ + +R S ++F Sbjct: 388 KELGESLRKDSPSDIFE 404 >gi|83945095|ref|ZP_00957461.1| porphobilinogen deaminase [Oceanicaulis alexandrii HTCC2633] gi|83851877|gb|EAP89732.1| porphobilinogen deaminase [Oceanicaulis alexandrii HTCC2633] Length = 320 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 171/305 (56%), Gaps = 8/305 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVH--KIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR SPLA+A + ++ L H K P + I+ ++T GDRIT+R L GGKGLFT Sbjct: 8 IATRTSPLAMAQTLDVQARLAKAHGEKDPEESFPILGMTTTGDRITDRALLLAGGKGLFT 67 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDLALH 124 +E+E+ L+ G+ AVHS KD+PT L GL+I+ L RED RD ++ ++DL Sbjct: 68 KELERALLDGDARFAVHSMKDVPTTLPDGLEIACVLEREDPRDTLLTRDGISRIEDLPQG 127 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT+S+RR++ L R D++++ RG ++TRL KLN+ + A LA AG++RL +E+ Sbjct: 128 ATLGTASIRRQSQALALRPDLNIVLLRGNVDTRLEKLNSGEVDATFLARAGLRRLGREQA 187 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 L + P+P QGA+ IE ++ +A++ ++ +NH T ++ ER FL LDGSC Sbjct: 188 ELPPLELTAVIPAPAQGAVGIEIRSDDVEARKALEPLNHLPTRIAIAAERGFLQALDGSC 247 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG-----NRCDAINIGRDAAQYIRFI 299 ++ IA A +G+ ++ G L DG + A +G + ++ Sbjct: 248 RTPIAAHATLEGAEIHLRGEALMPDGSKRWANETRAQLPELDPDAARLLGYELGLEVKRA 307 Query: 300 SNKNV 304 + Sbjct: 308 GGDTL 312 >gi|258541892|ref|YP_003187325.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-01] gi|256632970|dbj|BAH98945.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-01] gi|256636027|dbj|BAI01996.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-03] gi|256639082|dbj|BAI05044.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-07] gi|256642136|dbj|BAI08091.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-22] gi|256645191|dbj|BAI11139.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-26] gi|256648246|dbj|BAI14187.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-32] gi|256651299|dbj|BAI17233.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654290|dbj|BAI20217.1| porphobilinogen deaminase [Acetobacter pasteurianus IFO 3283-12] Length = 357 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 108/317 (34%), Positives = 162/317 (51%), Gaps = 15/317 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGGKG 62 P R+GTR SPLAL ++L + ++T GD++ NR L EIGGKG Sbjct: 39 PLRVGTRGSPLALVQTRAFLTTLTRFCPVLRDMGAFQEHQINTTGDQVQNRRLAEIGGKG 98 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL- 121 LF +EI + L G ID AVHS KD+ T L GL ++ L RED RD I + D Sbjct: 99 LFAKEIHEALADGRIDFAVHSLKDLETTLPPGLVLACTLKREDARDALILSPGLAQSDPD 158 Query: 122 ------ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 ++IG +S+RR+A +L R D+ RG ++TRL+KL ++ A LLA AG Sbjct: 159 DPYSALPEGALIGCASVRRQAQMLHVRPDLKFGLLRGNVQTRLDKLAAHQCQATLLALAG 218 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 +KRL + +L+ P+ GQG + + ++ + +EL+ I + ER+ Sbjct: 219 LKRLGMAERASIVLDPTVMVPAAGQGIVGVTVREDDIELRELLSAIEDYEARAVATAERS 278 Query: 236 FLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 LAELDGSC++ I G+A + L+ G+V DG + S G DA +G Sbjct: 279 LLAELDGSCRTPIGGYAQLIPIVAGEDPKLHLTGLVAREDGSFLLKRSITGLPEDAARLG 338 Query: 290 RDAAQYIRFISNKNVFN 306 ++ + +R S ++F Sbjct: 339 KELGESLRKDSPSDIFE 355 >gi|118474504|ref|YP_891866.1| porphobilinogen deaminase [Campylobacter fetus subsp. fetus 82-40] gi|158512506|sp|A0RNT3|HEM3_CAMFF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|118413730|gb|ABK82150.1| porphobilinogen deaminase [Campylobacter fetus subsp. fetus 82-40] Length = 303 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 102/300 (34%), Positives = 157/300 (52%), Gaps = 6/300 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +I +R S LAL R L+ H++ II + TKGD I + L +IGGKGLFT Sbjct: 3 IKIASRNSALALWQTHHIRDLLIAQ----GHSVEIITMKTKGDVILDTPLAKIGGKGLFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E ++ G D AVHS KD+PT GL+++ RED+RD +S ++L +L + Sbjct: 59 KELENSMLEGSADIAVHSLKDVPTTFPDGLKLACVCSREDVRDAMLSMKYKNLDELPQGA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT+SLRRK +L R+D+ +I RG + +R+ KL N + AI+LA AGI RL K + Sbjct: 119 KVGTTSLRRKMQILAHRADLDIISLRGNVNSRIAKLKNGEFDAIILAMAGINRLNLSKEV 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 K I+ P+ GQGA+ IE + + + ++ +N E + ER F+ L+G C+ Sbjct: 179 KFTSAIDTI-PAMGQGALGIEAI-DKKEILDAIEFLNDEKSVVETTIERDFVHTLNGGCQ 236 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + I A KG + I+ DG S+ + G++ A K + Sbjct: 237 APIGINAKLKGDKIEVEAILGLVDGSEILRDSKTYPKLAYKIAGKNFADEFIARGAKELL 296 >gi|145254797|ref|XP_001398757.1| porphobilinogen deaminase [Aspergillus niger CBS 513.88] gi|134084341|emb|CAK48681.1| unnamed protein product [Aspergillus niger] Length = 334 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 100/315 (31%), Positives = 155/315 (49%), Gaps = 12/315 (3%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K F IGTR S LAL +++L P + I T GD+ T L + K Sbjct: 13 SRKTFTIGTRKSKLALLQTDLVQAALKQ--TWPDYEFKIHSRETAGDQNTTIALRDFTTK 70 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSL 118 L+T+E+E LI+G++D VHS KD+PT L + + RED RDV + SL Sbjct: 71 NLWTQELEDLLIAGQVDFIVHSLKDVPTLLPSSCTLGPMMKREDTRDVLVMKKGLSYTSL 130 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 +L SV+GTSS+RR A L R + V+D RG I TRL+KL+ + ++LA AG+ Sbjct: 131 AELPEGSVVGTSSIRRTAQLARRYPHLKVMDVRGNIGTRLSKLDAEDGPFTCLILAAAGL 190 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 RL I L+ ++ + GQGA+ IE ++ + ++++ I H++T + ER Sbjct: 191 LRLDLGDRITSYLDSKNGGMLYAVGQGALGIEIRKDDQQVLDMLQNIGHKETTFACLAER 250 Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRD 291 + L L+G C + + + L IV++ DGK EV +G A G Sbjct: 251 SLLRTLEGGCSAPLGVESEWVNGALTMRSIVVSVDGKESAEVEVDGAVDSPQAAEEFGVT 310 Query: 292 AAQYIRFISNKNVFN 306 A+ + + + Sbjct: 311 VAKALVEKGAGKILD 325 >gi|460692|dbj|BAA05861.1| porphobilinogen deaminase [Clostridium josui] Length = 295 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 93/296 (31%), Positives = 153/296 (51%), Gaps = 9/296 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RIG+R S LA+ + S++ P + +I + T GD+I ++TL +I GKG Sbjct: 5 MKKIRIGSRDSKLAIIQSELIMSAIRKY--DPDIELELITMKTTGDKILDKTLDKIEGKG 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E++ L + E+D VHS KDMP + L + A RED RD FI ++ Sbjct: 63 LFVKELDNALYNNEVDITVHSYKDMPLEENPELPVVALSKREDPRDAFILP-----QNGE 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 IG+SSLRR+ L RG ++TRL KL++ + AI+LA AGIKRL E Sbjct: 118 NGEPIGSSSLRRQLQLKELFPGCKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLE 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I ++++ P+ QG I ++ V + + +K+ + E++ ER F+ E++G Sbjct: 178 SRIGRYFSVDEILPAASQGIIAVQGRVG--ENFDFLKLFHSEESLCISLAERTFVREMNG 235 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C + IA +A +GS + G+ + +GNR + + +G + + ++ Sbjct: 236 GCSTPIAAYATIQGSEIILKGLYCNETTGELRKECVSGNRNNPVELGYELVKKMKS 291 >gi|264679667|ref|YP_003279574.1| porphobilinogen deaminase [Comamonas testosteroni CNB-2] gi|262210180|gb|ACY34278.1| porphobilinogen deaminase [Comamonas testosteroni CNB-2] Length = 314 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 155/289 (53%), Gaps = 8/289 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LA+ A ++ L H++ ++ ++TKGD+I +R L+++GGKGLF Sbjct: 11 IVIATRESQLAMWQAEHVQAILRGR----GHSVDLLGMTTKGDQILDRALSKVGGKGLFV 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P +L +G ++ + RED RD F+S+ SL +L + Sbjct: 67 KELEVALEEGRADLAVHSLKDVPMELPEGFVLACVMTREDPRDAFVSNRYASLDELPQGA 126 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ALL R D+ + RG + TRL KL+ + AI+LA AG+ RL+ + I Sbjct: 127 VVGTSSLRRQALLQALRPDLKIEALRGNVNTRLRKLDEGQYDAIVLAAAGLMRLEMSERI 186 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + P+ GQGA+ IE + + + + H TW +V ERA + GSC Sbjct: 187 RARFDPAQMLPAAGQGALGIEVRADRQDIIDALAPLAHMPTWLTVTAERAVSRCMGGSCS 246 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNRCD---AINIGR 290 +A + +G TL+ +G V + D A +G Sbjct: 247 MPLAAYGRFEGDTLHMDAAWGDMEGSKGLVRVQASAQVTDFASANALGE 295 >gi|315638143|ref|ZP_07893325.1| hydroxymethylbilane synthase [Campylobacter upsaliensis JV21] gi|315481679|gb|EFU72301.1| hydroxymethylbilane synthase [Campylobacter upsaliensis JV21] Length = 308 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 96/305 (31%), Positives = 148/305 (48%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR SPLAL + L H + + STKGD + + L +IGGKG Sbjct: 1 MKKLIIATRKSPLALWQSEFVADILRKTHH---IEVDLEGFSTKGDILLDSPLAKIGGKG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E ++ + AVHS KD+P+ L +GL ++A RED D +S + L L Sbjct: 58 LFTKELENAMLENKAHLAVHSLKDVPSFLPQGLVLAALSVREDDTDALLSELYKDLNALP 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-- 180 ++ +GT+SLRRK LL R D+ +I+ RG + +RL +L + + AI+LA AG+KRL Sbjct: 118 QNAKVGTTSLRRKMQLLSLRPDLHIINLRGNVNSRLKRLKDGEFDAIILASAGVKRLGLE 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E + ++ P+ QG + I++ N + L++ +N E + ER F+ L Sbjct: 178 SEVKFIYRFSKDELVPAATQGILGIQSP-NKSEILTLLQCLNDEKSLIESTVERDFIRTL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I A G + I+ DG R + + G A Sbjct: 237 EGGCQVPIGINAELIGEQITVRSILGLPDGSEILRDKRIILKKNYQGFGERLALEFIKRG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELL 301 >gi|25453441|sp|Q59293|HEM3_CLOJO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 291 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 93/296 (31%), Positives = 153/296 (51%), Gaps = 9/296 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RIG+R S LA+ + S++ P + +I + T GD+I ++TL +I GKG Sbjct: 1 MKKIRIGSRDSKLAIIQSELIMSAIRKY--DPDIELELITMKTTGDKILDKTLDKIEGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E++ L + E+D VHS KDMP + L + A RED RD FI ++ Sbjct: 59 LFVKELDNALYNNEVDITVHSYKDMPLEENPELPVVALSKREDPRDAFILP-----QNGE 113 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 IG+SSLRR+ L RG ++TRL KL++ + AI+LA AGIKRL E Sbjct: 114 NGEPIGSSSLRRQLQLKELFPGCKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLE 173 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I ++++ P+ QG I ++ V + + +K+ + E++ ER F+ E++G Sbjct: 174 SRIGRYFSVDEILPAASQGIIAVQGRVG--ENFDFLKLFHSEESLCISLAERTFVREMNG 231 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C + IA +A +GS + G+ + +GNR + + +G + + ++ Sbjct: 232 GCSTPIAAYATIQGSEIILKGLYCNETTGELRKECVSGNRNNPVELGYELVKKMKS 287 >gi|242015312|ref|XP_002428308.1| Porphobilinogen deaminase, putative [Pediculus humanus corporis] gi|212512893|gb|EEB15570.1| Porphobilinogen deaminase, putative [Pediculus humanus corporis] Length = 356 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 107/340 (31%), Positives = 163/340 (47%), Gaps = 37/340 (10%) Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M ++G+R S LAL+ + L + P I+ + T GD+I ++ L +IG Sbjct: 1 MTDSNLLKVGSRKSQLALSQTQIIVNQLKE--NFPDLKFDIVTMLTTGDKILDKPLPKIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQ 116 K LFT+E+E L E+D VHS KD+PT L L I A L RED RD + + + Sbjct: 59 EKSLFTKELEAALEKNEVDFVVHSLKDLPTSLPPNLTIGAILKREDPRDALVVNKNLNFK 118 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAG 175 ++ L SVIGTSSLRR A L R ++ V + RG + TRL KL+ I+LA AG Sbjct: 119 NVSSLPESSVIGTSSLRRCAQLCRNYPNLKVENIRGNLNTRLKKLDEGDKYTGIVLAAAG 178 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 +KRLK + I +IL + + GQGA+ +E + NN K ++++V+N T V ER+ Sbjct: 179 LKRLKYDDRITQILEPNEMLYAVGQGALAVECNKNNEKVLDILEVLNDHSTILRVIAERS 238 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD----------- 284 FL L G C + +A + LY G V + +G+ + +++ Sbjct: 239 FLKTLGGGCSAPVAVSTKLEEKELYLTGAVWSLNGEKHIQKTKSVTISSDEPLRKKSRVM 298 Query: 285 -------------------AINIGRDAAQYIRFISNKNVF 305 + N+G AQ + + N+ Sbjct: 299 GESHAEITARNISNNDLNLSENLGILLAQDLIKLGALNII 338 >gi|118472022|ref|YP_885356.1| porphobilinogen deaminase [Mycobacterium smegmatis str. MC2 155] gi|118173309|gb|ABK74205.1| porphobilinogen deaminase [Mycobacterium smegmatis str. MC2 155] Length = 318 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 92/318 (28%), Positives = 143/318 (44%), Gaps = 18/318 (5%) Query: 1 MEKK---PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57 M R+GTR S LA A R +L+ H ++ +ST+GDR + + Sbjct: 1 MANNRDSVIRLGTRGSLLATTQAGTVRDALLAA----GHPCELVIISTEGDRNQG-PIAD 55 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 IG G+FT + + + G +D AVHS KD+PT + I A RED RD ++ Sbjct: 56 IGI-GVFTAALREAIHDGRVDMAVHSYKDLPTASDERFCIPAIPRREDPRDALVARDGLV 114 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L +L SVIGTSS RR A L + + RG ++TRLN++ + + I++A AG+ Sbjct: 115 LGELPTGSVIGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVTSGELDGIVVARAGLA 174 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + V+ E L P+P QGA+ +E + + ++ ++ DT +V ER L Sbjct: 175 RIGRLNVVTETLEPVQMLPAPAQGALAVECRAGDTELIAILSELDDADTRAAVTAERVLL 234 Query: 238 AELDGSCKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 AEL+ C + + A L G DG S G A + Sbjct: 235 AELEAGCSAPVGAIAEVVESIDEDGNVFEELSLRGCAATLDGSDVIRASGIGTPDRAAEL 294 Query: 289 GRDAAQYIRFISNKNVFN 306 G A + + + + Sbjct: 295 GVSVAAELFDLGARELLE 312 >gi|325846167|ref|ZP_08169236.1| hydroxymethylbilane synthase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481646|gb|EGC84682.1| hydroxymethylbilane synthase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 779 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 92/300 (30%), Positives = 143/300 (47%), Gaps = 4/300 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IG+R S LAL A + L I+ +STKGDRI +R + ++ KG+F Sbjct: 2 IKIGSRASKLALIQANMVKDILEK----EGLEAQIVEISTKGDRIRDRKIDQLNSKGVFV 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EIE+KL+ ID AVHS KDMP+++ L + L ED RD F+ D ++ Sbjct: 58 REIEEKLLDKTIDLAVHSLKDMPSQIDDRLIFTPPLKGEDPRDCFVGKDIFKKMDDLNNA 117 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GT S RR + ++I RG +ETR+ K+ + ++LA +G+ R + I Sbjct: 118 LVGTGSNRRVCQGKNYFTNIKFKAIRGNVETRIKKVQSENLDGVILAKSGLIRAGLDGEI 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ F PSP QG + IE + K E+ K + E T + ERAF EL C Sbjct: 178 NFDLDPHIFTPSPCQGILGIEIRKEDKKLFEIFKKNSDEKTLFRMETERAFQKELGADCS 237 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + + F + G + + +GN D IN+ + A+ ++ S K + Sbjct: 238 TPMGIFTEIDHDKITLTGSMAFDKDDRINYEKVSGNISDRINLAQKLARTLKKKSYKKII 297 >gi|121713720|ref|XP_001274471.1| hydroxymethylbilane synthase, putative [Aspergillus clavatus NRRL 1] gi|119402624|gb|EAW13045.1| hydroxymethylbilane synthase, putative [Aspergillus clavatus NRRL 1] Length = 339 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 97/320 (30%), Positives = 153/320 (47%), Gaps = 17/320 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K F IGTR S LAL+ S+L + P + I T GDR T L E K Sbjct: 13 SRKTFTIGTRSSKLALSQTDLIASALKK--RWPDYTFEIHSRETAGDRNTTIALREFTTK 70 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119 L+T+E+E+ L++G++D VHS KD+PT L + RED RDV + Sbjct: 71 NLWTQELEELLMAGDVDLIVHSLKDVPTLLPSSCTLGPMTEREDSRDVLVMKKGLPRMSL 130 Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176 ++ SV+GTSS+RR A L R + + D RG I TRL KL+ I+LA AG+ Sbjct: 131 SEMPEGSVVGTSSIRRTAQLARRYPHLKIQDVRGNIGTRLAKLDAEDSPFTCIILAAAGL 190 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 RL + I + L+ ++ + GQGA+ +E ++ E+++ I H++T + ER Sbjct: 191 LRLGLDDRITQYLDSKNGGMLYAVGQGALGVEIRKDDQLLHEMLQTIGHKETTLACLAER 250 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 + L L+G C + + L +V++ DG+ E+ +G+ +A Sbjct: 251 SLLRTLEGGCSAPLGVETEWVKDSTGASKLRMRAVVVSVDGRESAEIEVDGSIDTNEEAE 310 Query: 287 NIGRDAAQYIRFISNKNVFN 306 N G A+ + + Sbjct: 311 NFGVTVAKSLVEKGAGKILE 330 >gi|315497777|ref|YP_004086581.1| porphobilinogen deaminase [Asticcacaulis excentricus CB 48] gi|315415789|gb|ADU12430.1| porphobilinogen deaminase [Asticcacaulis excentricus CB 48] Length = 314 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 113/309 (36%), Positives = 172/309 (55%), Gaps = 8/309 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSL-MDVHKIPPHNIV---IIPLSTKGDRITNRTLTEIGGK 61 +IGTR S LA + + + P + ++ ++T+GDRI +R L E GGK Sbjct: 5 LKIGTRGSRLATTQCGWVQRQIVTALGHDPALSHEVAPLVIITTQGDRIQDRRLIEAGGK 64 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 LFT+EIE L+SGE+D AVHS KDMP + + GL + A+ RED RD F+S +SL+DL Sbjct: 65 QLFTKEIEDALLSGEVDVAVHSLKDMPAEDIPGLSLCAFPVREDPRDAFVSLKYRSLEDL 124 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GT+SLRR+A L R D+ V+ RG ++TRL+KL A+LLA AG+KR+ Sbjct: 125 PQGAKLGTASLRRQAQALAVRPDLEVVMLRGNVDTRLSKLEAGHCDAMLLAAAGLKRMGL 184 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E IK ++ + FP +PGQGA+ I+ N QE +K ++H +T ++ ER L L+ Sbjct: 185 EAHIKSYIDPDLFPCAPGQGALAIQCR-TNDLDQEWIKRLHHVETHLQISAERGALVALE 243 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRF 298 SC++A+ +A +G L + L +DG+ + A +G Q IR Sbjct: 244 ASCRTAVGAYAKIEGDALTLFVEALTADGRTRWQRRETIIAPTLETAHALGLGLGQSIRD 303 Query: 299 ISNKNVFNF 307 + + + Sbjct: 304 EAGDRLIQY 312 >gi|253579011|ref|ZP_04856282.1| porphobilinogen deaminase [Ruminococcus sp. 5_1_39B_FAA] gi|251849954|gb|EES77913.1| porphobilinogen deaminase [Ruminococcus sp. 5_1_39BFAA] Length = 317 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 91/306 (29%), Positives = 149/306 (48%), Gaps = 11/306 (3%) Query: 1 MEKK---PFRIGTRCSPLALAHAFETRSSLMDVHK----IPPHNIVIIPLSTKGDRITNR 53 M +K IG+R S LA+ + +S + ++ + I+ + T GD I +R Sbjct: 12 MRRKMMTEVIIGSRESKLAVLQSEMVKSYIEQKNREENAGSEITVNILTMKTTGDIILDR 71 Query: 54 TLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH 113 TL ++GGKGLF +E+++ L+ G+ + +VHS KDMP ++ K L + A+ RED RDV + Sbjct: 72 TLDKVGGKGLFVKELDRALLDGKSNLSVHSLKDMPMEVPKELPLLAFSKREDPRDVLVLP 131 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173 + D +G SSLRR L + ++ V RG ++TRL KL+ + ++LA Sbjct: 132 EGVAELDPD--KPLGCSSLRRTLQLKKLYPEMEVKSIRGNLQTRLRKLDEGEYSGLILAA 189 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG+KRL E I ++ PS GQG + ++ + D W + E Sbjct: 190 AGLKRLGLENRISRYFTPDEMIPSAGQGILAVQGRKGEDYGY--LDGYCDRDAWLAGTAE 247 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 RA++ LDG C S +A FA G ++ G+ + + G D +G A Sbjct: 248 RAYVKYLDGGCSSPVAAFAEVDGDEIFIRGLYYSEATGKWLTGQIRGAAEDGEKLGIALA 307 Query: 294 QYIRFI 299 + ++ Sbjct: 308 KQLKSD 313 >gi|121711982|ref|XP_001273606.1| porphobilinogen deaminase Hem3, putative [Aspergillus clavatus NRRL 1] gi|119401758|gb|EAW12180.1| porphobilinogen deaminase Hem3, putative [Aspergillus clavatus NRRL 1] Length = 333 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 97/314 (30%), Positives = 150/314 (47%), Gaps = 15/314 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA+ A R +L + P + I+ L T GDR + L G K L+ Sbjct: 11 PLRIGTRRSKLAIVQAEGIRDNLQKLS--PDRSFEIVTLHTLGDRDKSTALYSFGAKNLW 68 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T E+E+KL SGE+D VH KDMPT L ++A PR+D RD I +L+ L Sbjct: 69 TAELEEKLNSGELDVVVHCLKDMPTTLPDTCDLAAIPPRDDPRDALIIKSSLPYTTLQSL 128 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRL 179 +++GTSS+RR A L R + + RG +ETRL K++ + + ++++ AG++RL Sbjct: 129 PAGAIVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPDGEYTCMVMSAAGLERL 188 Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + I + L D + GQGA+ +E + EL+ + E + + ERA + Sbjct: 189 GLQHRISQYLGSRDGGILHAVGQGALGLEIRKGDSATLELLDRLGDEGSTLACLAERALM 248 Query: 238 AELDGSCKSAIAGFAYCKG---STLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRD 291 L+G C I L IV++ DG S ++ +AI +G + Sbjct: 249 RALEGGCSVPIGVETEWVDWAARLLAMRAIVVSLDGTRSVLDSVEVRVQSKEEAIALGEE 308 Query: 292 AAQYIRFISNKNVF 305 A + + Sbjct: 309 LAARLVKAGADGIL 322 >gi|238926756|ref|ZP_04658516.1| hydroxymethylbilane synthase [Selenomonas flueggei ATCC 43531] gi|238885288|gb|EEQ48926.1| hydroxymethylbilane synthase [Selenomonas flueggei ATCC 43531] Length = 289 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 95/283 (33%), Positives = 151/283 (53%), Gaps = 3/283 (1%) Query: 24 RSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHS 83 ++ H P + + L+TKGDRI + L +IGGKGLFT+E+E+ ++ +D AVHS Sbjct: 2 AEAIKKEH--PSCCVELHELTTKGDRILDAPLAKIGGKGLFTKELEQAMLDDAVDLAVHS 59 Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS 143 KDMPT++ GL I A R D D F+S +++DL + + +GTSSLRR+A LL R Sbjct: 60 LKDMPTEVPDGLVIGAITTRLDPGDAFVSAHYAAVEDLPVGARVGTSSLRRRAQLLAVRP 119 Query: 144 DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAI 203 D+++ D RG + TRL KL+ + AI+LA AG+KRL E+ I+ IL P+ GQGA+ Sbjct: 120 DLTICDLRGNVNTRLAKLDAGEFDAIVLAAAGLKRLGFERRIRTILPRSVMLPAVGQGAL 179 Query: 204 CIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK-GSTLYFY 262 IE + ++ + + ERAFL ++G C+ + +A + Sbjct: 180 AIECRAGDAAILSAIEFLRDAGMTTAAQAERAFLRRVEGGCQIPVGVYAEVDANGQISID 239 Query: 263 GIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 ++ + DG+ +G A +G A+ + + + Sbjct: 240 AMIASVDGQRICRSDAHGAGEQAEALGTALAEELLDAGGREIL 282 >gi|297201478|ref|ZP_06918875.1| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083] gi|197716811|gb|EDY60845.1| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083] Length = 319 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 95/317 (29%), Positives = 157/317 (49%), Gaps = 17/317 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K R+GTR S LALA + ++ V P + ++ ++T GD ++ L +IGG Sbjct: 1 MSTKALRLGTRRSKLALAQSGRVAEAVSQVTGRP---VELVEITTYGD-VSKEALAQIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L+ GE+D AVHS KD+PT L ++A RED RDV ++ A D Sbjct: 57 TGVFVTALREALLKGEVDFAVHSLKDLPTGQPDELVLAALPEREDPRDVIVARDALKFTD 116 Query: 121 LALHSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + IGT S RR A L + DI + RG I+TR+ + + + A++LA AG+ Sbjct: 117 LPPGARIGTGSPRRTAQLNAYARAHGLDIETVAIRGNIDTRMRFVRDGELDAVVLAAAGL 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 +R+ + + + L+++ P+PGQGA+ IE +N + ++ T +V ER+ Sbjct: 177 QRIGRIDEVTDFLSVDTVLPAPGQGALAIECTADNADLIAALGELDDPFTRVAVTAERSL 236 Query: 237 LAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAIN 287 LA L+ C + + A + G+V +DG ++S G A+ Sbjct: 237 LAALEAGCSAPVGALADLLADGQIVKEMRLRGVVGTTDGSRMVQLSTTGPVPETYDQAMA 296 Query: 288 IGRDAAQYIRFISNKNV 304 +GR+ A + + Sbjct: 297 LGRELAAEMLAQGAAGL 313 >gi|83720099|ref|YP_441428.1| porphobilinogen deaminase [Burkholderia thailandensis E264] gi|257139896|ref|ZP_05588158.1| porphobilinogen deaminase [Burkholderia thailandensis E264] gi|123740194|sp|Q2T071|HEM3_BURTA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|83653924|gb|ABC37987.1| porphobilinogen deaminase, putative [Burkholderia thailandensis E264] Length = 329 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 166/305 (54%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMELPAGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARYPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++ED P+ GQGA+ IE + ++ T +V ERA L GSC Sbjct: 191 IRALLDVEDSLPAAGQGALGIEIAAGRADVAAWLAPLHDHATALAVEAERAVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV---SRNGNRCDAINIGRDAAQYIRFISN 301 + +A A +G L+ G V +DG SR DA+ +GR + + Sbjct: 251 EVPLAAHAVWRGDELHLTGSVSTTDGARVLAARAQSRAATAADALALGRAVSDELERQGA 310 Query: 302 KNVFN 306 + + + Sbjct: 311 RAIVD 315 >gi|57242140|ref|ZP_00370080.1| porphobilinogen deaminase [Campylobacter upsaliensis RM3195] gi|57017332|gb|EAL54113.1| porphobilinogen deaminase [Campylobacter upsaliensis RM3195] Length = 308 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 96/305 (31%), Positives = 147/305 (48%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR SPLAL + L H + + STKGD + + L +IGGKG Sbjct: 1 MKKLIIATRKSPLALWQSEFVADILRKTH---GIEVHLEGFSTKGDILLDSPLAKIGGKG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E ++ + AVHS KD+P+ L +GL ++A RED D +S + L L Sbjct: 58 LFTKELENAMLENKAHLAVHSLKDVPSFLPQGLVLAALSVREDDTDALLSELYKDLNALP 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-- 180 ++ +GT+SLRRK LL R D+ +I+ RG + +RL +L + AI+LA AG+KRL Sbjct: 118 QNAKVGTTSLRRKMQLLSLRPDLHIINLRGNVNSRLKRLKGGEFDAIILASAGVKRLGLE 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E + ++ P+ QG + I++ N + L++ +N E + ER F+ L Sbjct: 178 SEVKFIYRFSKDELVPAATQGILGIQSPDKN-EILTLLQCLNDEKSLIESTVERDFIRTL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I A G + I+ DG R + + G A Sbjct: 237 EGGCQVPIGINAELMGEQITVRSILGLPDGSEILRDKRIILKKNYQGFGERLALEFIKRG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELL 301 >gi|54027143|ref|YP_121385.1| porphobilinogen deaminase [Nocardia farcinica IFM 10152] gi|61213309|sp|Q5YP70|HEM3_NOCFA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|54018651|dbj|BAD60021.1| putative porphobilinogen deaminase [Nocardia farcinica IFM 10152] Length = 346 Score = 216 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 91/310 (29%), Positives = 147/310 (47%), Gaps = 15/310 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA+ A R +L+ ++ + T GD ++ + +IG G+F Sbjct: 9 PLRIGTRGSLLAMTQAGTVRDALIAA----GRPAELVVVKTPGDMSSD-PVQKIG-VGVF 62 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T + +L +G ID AVHS KD+PT I+A PRED RD ++ L +L Sbjct: 63 TSALRDELAAGTIDLAVHSYKDLPTAPDPRFVIAAIPPREDPRDALVARDGLVLGELPAG 122 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTS+ RR A L + ++ RG +++RL ++ + + A+++A AG+ R+ + V Sbjct: 123 AKVGTSAPRRVAQLRALGLGLDIVPLRGNLDSRLARVTDGELDAVVVARAGLSRIGRTAV 182 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L P+P QGA+ +E + E + ++ T +V ERA LAEL+ C Sbjct: 183 ITEALEPVQMLPAPAQGALAVECRSEDAALIEALAELDDAATRAAVVAERALLAELEAGC 242 Query: 245 KSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 + + A L G A DG S G+ A +GR A+ Sbjct: 243 TAPVGALAEVVESLDDDGRIVEELSLRGCAAAVDGSEVLRASVVGDPERAAELGRALARE 302 Query: 296 IRFISNKNVF 305 + + + + Sbjct: 303 LLELGARELL 312 >gi|328768210|gb|EGF78257.1| hypothetical protein BATDEDRAFT_17445 [Batrachochytrium dendrobatidis JAM81] Length = 342 Score = 216 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 107/324 (33%), Positives = 154/324 (47%), Gaps = 21/324 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K F IGTR S LA+ ++ L + P I ++T GD++ + L++IG K Sbjct: 16 SKTNFTIGTRESQLAMIQTTHVQALLKQQY--PQLTFDINGMTTTGDQVQDVALSKIGTK 73 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSL 118 LFT+E+E L +D VHS KD+PT+L G+ + A L RE DV I H+ L Sbjct: 74 SLFTKELEMALDDHSVDFVVHSLKDLPTQLPSGMMVGAILEREQPNDVVIMSLKHSFTGL 133 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176 L S+IGTSS+RR A L R ++ D RG + TRL KL++ + AILLAYAGI Sbjct: 134 AQLPAGSIIGTSSVRRSAQLKRRFPNLVFQDIRGNLNTRLKKLDDPASPFAAILLAYAGI 193 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ I EIL + GQGAI IE N+ + L+ +NH T ER+F Sbjct: 194 HRMGWTDRITEILPTVTILHAVGQGAIGIECRENDTCVRSLLAPLNHTPTRIRCTAERSF 253 Query: 237 LAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNGNRCD------- 284 + L+G C + + + L G V + DG I + + + Sbjct: 254 MRSLEGGCSVPLGVSTSIEPNDTGIDVLCLTGSVTSLDGSIELRHAMSMDLDSEDIEEKV 313 Query: 285 --AINIGRDAAQYIRFISNKNVFN 306 A +G A + K+V + Sbjct: 314 TMAHKLGTALANVLIERGAKDVLD 337 >gi|254418576|ref|ZP_05032300.1| porphobilinogen deaminase [Brevundimonas sp. BAL3] gi|196184753|gb|EDX79729.1| porphobilinogen deaminase [Brevundimonas sp. BAL3] Length = 317 Score = 216 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 111/306 (36%), Positives = 162/306 (52%), Gaps = 8/306 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV----IIPLSTKGDRITNRTLTEIGG 60 P RIGTR S LALA + + ++ + I ++ + T GDRI +R L E+GG Sbjct: 4 PLRIGTRRSKLALAQSGMMQRAIGRALGVAEAEIEAAVPLVEIVTTGDRIQDRRLMEMGG 63 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K LFT+EIE+ L+ ID A+HS KD+P + +GL I+A RED RD FIS S Sbjct: 64 KALFTKEIEEALLDRRIDIAIHSMKDVPAEQPEGLCIAAIPEREDARDAFISRDFDSFDQ 123 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRR+A L R D+ V RG I+TRL + AILLA +G+ RL Sbjct: 124 LPFGARLGTASLRRQAQALALRPDLKVEMLRGNIDTRLRRAAEGDFDAILLAVSGMTRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I+E L+++ F P+PGQGA+ I+T + V +NH +T +V ER + L Sbjct: 184 VTEHIREKLSLDAFLPAPGQGALAIQTR-ADDIDAPWVAALNHPETAVAVAAERGAMTAL 242 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIR 297 +GSC++A+ +A +G TL +L+ DG DA +G + Sbjct: 243 EGSCRTAVGAYALIEGDTLRLTTEMLSPDGSARWRRVGELFQPTEADARALGERLGGEVH 302 Query: 298 FISNKN 303 + Sbjct: 303 AFAGDQ 308 >gi|70997451|ref|XP_753473.1| hydroxymethylbilane synthase [Aspergillus fumigatus Af293] gi|66851109|gb|EAL91435.1| hydroxymethylbilane synthase, putative [Aspergillus fumigatus Af293] gi|159126797|gb|EDP51913.1| hydroxymethylbilane synthase, putative [Aspergillus fumigatus A1163] Length = 341 Score = 216 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 151/319 (47%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++ F IGTR S LAL ++L P + I T GD+ T L E K Sbjct: 15 SRRTFTIGTRKSKLALLQTDLVVAALKK--SWPEYTFQIHSQETAGDKNTVIALREFTTK 72 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 L+T+E+E+ L++G++D VHS KD+PT+L + + RED RDV + S Sbjct: 73 NLWTQELEELLMAGDVDLIVHSLKDVPTQLPPSCTLGPMMEREDTRDVLVMKKGLPNMSF 132 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176 ++ SV+GTSS+RR A L R + V D RG I TRL KL+ I+LA AG+ Sbjct: 133 SEMPAGSVVGTSSIRRTAQLARRYPHLKVQDVRGNIGTRLAKLDAEDSPFTCIVLAAAGL 192 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 RL E I + L+ ++ + GQGA+ +E ++ ++++ I H+ T + ER Sbjct: 193 LRLGMEDRISQYLDSKNGGMLYAVGQGALGVEIRKDDKVLRDMLNSIGHQKTTLACLAER 252 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGN---RCDAI 286 + L L+G C + + L IV++ DG+ EV +G+ A Sbjct: 253 SLLRTLEGGCSAPLGVETEWVQDSDRSSKLRMRAIVVSVDGRESAEVEVDGSVDTAESAE 312 Query: 287 NIGRDAAQYIRFISNKNVF 305 G A+ + + Sbjct: 313 EFGVTVAKALVEKGAGEIL 331 >gi|91789512|ref|YP_550464.1| porphobilinogen deaminase [Polaromonas sp. JS666] gi|91698737|gb|ABE45566.1| porphobilinogen deaminase [Polaromonas sp. JS666] Length = 334 Score = 216 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 103/314 (32%), Positives = 158/314 (50%), Gaps = 19/314 (6%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + I TR S LAL A ++ L + ++ ++T+GD+I +R+L+++GGKGL Sbjct: 14 RKIIIATRESRLALWQAEHVKALLESRLGW---QVELLGMTTQGDQILDRSLSKVGGKGL 70 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E L G D AVHS KD+P L G ++ L RED D F+S+ SL DL Sbjct: 71 FVKELEVALSEGRADLAVHSLKDVPMDLPDGFALACVLEREDPHDAFVSNQFASLADLPQ 130 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +V+GTSSLRR LL R D+++ RG ++TRL KL+ HAI+LA AG+KRL + Sbjct: 131 GAVVGTSSLRRLVLLKALRPDLNIEPLRGNLDTRLRKLDEGHYHAIVLAAAGLKRLGLQA 190 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ I +D P+ GQGA+ IE + + + + H+ TW +V ER + GS Sbjct: 191 RIRGIFAPDDMLPAAGQGALGIEVRADRHDLMQALGTLAHQPTWLAVTAERTVSRAMGGS 250 Query: 244 CKSAIAGFAY---CKGST-LYFYGIVLA------SDGK---IFHEVSRNG---NRCDAIN 287 C +A + +GS + + G+ V + + +A Sbjct: 251 CSMPLAAYTEGPAAEGSEGMQLHATWGDPATADAPAGQPLAPLVRVQKTAVVRSFAEAEA 310 Query: 288 IGRDAAQYIRFISN 301 +G A +R Sbjct: 311 LGEAVAAQLRAGGA 324 >gi|305665660|ref|YP_003861947.1| porphobilinogen deaminase [Maribacter sp. HTCC2170] gi|88710417|gb|EAR02649.1| porphobilinogen deaminase [Maribacter sp. HTCC2170] Length = 529 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 101/311 (32%), Positives = 152/311 (48%), Gaps = 13/311 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A ++ L + H ++P+ + GD + ++ L E+G Sbjct: 1 MS-KIIRIGTRDSELALWQANAVKNQLEAL----GHQTTLVPVKSTGDIVLDKPLYELGV 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ +++G+ID AVHS KD+PT L KG+ +A L R + D+ + + Sbjct: 56 TGIFTKTLDVAMLNGDIDIAVHSMKDVPTALPKGIVQAAVLKRANYLDILAYNDNEEFL- 114 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 ++I T SLRRKA L +V+D RG I +R+ KLN+N + + A AG+ R+ Sbjct: 115 GGRDAIIATGSLRRKAQWLNRYPTHTVVDLRGNINSRMQKLNDNDWNGAIFAAAGLDRIG 174 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E + + P+P QGAI + N+ E +NHE T ER FL L Sbjct: 175 LEHEN--TIGLTWMVPAPAQGAIMVVALENDEYVLEACAQMNHEATEICTGLEREFLRIL 232 Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +G C + I AY K + G++L+ DGK E N+ RD A I Sbjct: 233 EGGCTAPIGALAYINKEEEVKLKGVLLSLDGKKRLEAEFAEPLGKHQNMARDCANSILAR 292 Query: 300 SNK----NVFN 306 K + N Sbjct: 293 GGKRLMGEILN 303 >gi|302556915|ref|ZP_07309257.1| porphobilinogen deaminase [Streptomyces griseoflavus Tu4000] gi|302474533|gb|EFL37626.1| porphobilinogen deaminase [Streptomyces griseoflavus Tu4000] Length = 311 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 97/304 (31%), Positives = 146/304 (48%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L P ++P+ T GD+ L+ + GKG FT Sbjct: 7 IRIVSRDSPMALAQVERVRAELAAAR--PGVRTEVVPVKTTGDKWLG-DLSAVEGKGAFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++G D AVH KD+P L G +A+L R+D+RD + +L +LA Sbjct: 64 KEVDAALLAGRADVAVHCVKDVPADRPLPAGTVFAAFLKRDDVRDALVHPDGLTLDELAP 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSS+RR A L ++ + RG R+ KL +A A+LLA +G++R+ + Sbjct: 124 GTRIGTSSVRRVAQLAVSHPHLTCVPLRGNANLRMEKLAAGEADALLLAVSGLERIGRAD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI E+L+ E P G G + ++ + E V + H DT ER FL L G Sbjct: 184 VISEVLSPEAMMPPIGAGILALQCREGDTALIEAVSALGHPDTHREATAERMFLHVLQGH 243 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG+A L V +DGK R D +G A + + Sbjct: 244 CNSPIAGYAQVDLSGELSLRACVFTADGKTRLNAHEWAGRLDPATLGTSVAVALLRQGAR 303 Query: 303 NVFN 306 + + Sbjct: 304 EIID 307 >gi|227545398|ref|ZP_03975447.1| porphobilinogen deaminase [Lactobacillus reuteri CF48-3A] gi|300908522|ref|ZP_07125985.1| hydroxymethylbilane synthase [Lactobacillus reuteri SD2112] gi|112944692|gb|ABI26362.1| porphobilinogen deaminase [Lactobacillus reuteri] gi|227184680|gb|EEI64751.1| porphobilinogen deaminase [Lactobacillus reuteri CF48-3A] gi|300893929|gb|EFK87287.1| hydroxymethylbilane synthase [Lactobacillus reuteri SD2112] Length = 305 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 94/308 (30%), Positives = 154/308 (50%), Gaps = 7/308 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K +G+R S LA+A +SL ++ P I + T+GDR +L +IGG Sbjct: 1 MTDKVI-VGSRKSKLAMAQTKLVIASLKEL--FPTTQFEIKNVITEGDRNQQASLAKIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG+F +EIE++L + ID AVHS KD+ L L + A+ R D +S + D Sbjct: 58 KGVFVKEIEEELKNCTIDFAVHSLKDVMPVLPDELTLGAFPKRVSPFDCLVSRQEFTSLD 117 Query: 121 L-ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 + IGT+SLRR+ LL R D+ +I RG I+TRL K++ ++LA AG+ RL Sbjct: 118 ALPHGARIGTNSLRRQGQLLNVRPDLKIIPIRGNIDTRLKKIDTENLAGVVLAEAGLDRL 177 Query: 180 KKEKVIKEILNI-EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + L++ + P+ GQG + IE + + ++++ IN + ++ ER F+ Sbjct: 178 SIDLSSYHQLSLKDIIVPAVGQGCLAIECRKADERVRKMLDQINDPQSAKCIHIEREFMR 237 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 EL GSC I G AY + + F G++ + +G+ + + +G+ A + Sbjct: 238 ELGGSCNFPIGGHAYLQDQQIVFDGLIASPNGEHLIKEVAV--PANKPGVGKVVADQLLA 295 Query: 299 ISNKNVFN 306 N + Sbjct: 296 KDNFGIIE 303 >gi|297192867|ref|ZP_06910265.1| porphobilinogen deaminase domain-containing protein [Streptomyces pristinaespiralis ATCC 25486] gi|297151527|gb|EFH31219.1| porphobilinogen deaminase domain-containing protein [Streptomyces pristinaespiralis ATCC 25486] Length = 319 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 90/317 (28%), Positives = 155/317 (48%), Gaps = 17/317 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ R+GTR S LA+A + + ++ + + ++ ++T GD ++ L +IGG Sbjct: 1 MTERALRLGTRRSKLAMAQSGQVAEAVRRLS---GRAVELVEITTYGD-VSREHLAQIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L GE+D AVHS KD+PT L ++A RED RDV I+ S + Sbjct: 57 TGVFVAALREALARGEVDFAVHSLKDLPTTQPDELALAAVPKREDPRDVLIARDGLSFER 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + IGT S RR A L + + RG ++TR+ + N + A++LA AG+ Sbjct: 117 LPNGARIGTGSPRRMAQLNAYARTHGLTIETVPIRGNVDTRIGFVRNGELDAVVLAAAGL 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ + + + L+++ P+PGQGA+ IE ++ + ++ T +V ER+ Sbjct: 177 NRIGRTDEVTDFLSVDFVLPAPGQGALAIECSASDADLVATLAGLDDPHTRVAVTAERSL 236 Query: 237 LAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAIN 287 LA L+ C + + A G + G+V +DG ++S G DA Sbjct: 237 LAALEAGCSAPVGALADLLGDGQEFTEMRLRGVVGTTDGSSLVQLSTTGPVPTSHDDAAA 296 Query: 288 IGRDAAQYIRFISNKNV 304 +GR+ A + + Sbjct: 297 LGRELADEMLAKGAAGL 313 >gi|70999177|ref|XP_754310.1| porphobilinogen deaminase Hem3 [Aspergillus fumigatus Af293] gi|66851947|gb|EAL92272.1| porphobilinogen deaminase Hem3, putative [Aspergillus fumigatus Af293] gi|159127327|gb|EDP52442.1| porphobilinogen deaminase Hem3, putative [Aspergillus fumigatus A1163] Length = 362 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 97/312 (31%), Positives = 146/312 (46%), Gaps = 13/312 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA+ R L + P I L T GDR L + G K L+ Sbjct: 42 PLRIGTRRSNLAMVQTEGIRDRLQKIG--PDRTYEIEALRTAGDRDQLTALYDFGAKSLW 99 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T E+E+KL SGE+D VH KDMPT L +++A PR+D RD I SLK L Sbjct: 100 TTELEEKLTSGELDVIVHCLKDMPTTLPDTCELAAIPPRDDPRDALIIKAGLPYTSLKSL 159 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRL 179 +V+GTSS+RR A L R + + RG +ETRL K++ +++ ++++ AG++R+ Sbjct: 160 PEGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPHSEYMCMVMSAAGLERV 219 Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + I + L D + GQGA+ +E + K QEL+ + + + ER+ + Sbjct: 220 GLKHRISQYLGSRDGGILYAVGQGALGLEIRKGDRKMQELLGQLADRKSTLACLAERSLM 279 Query: 238 AELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAA 293 L+G C I L IV++ DG E +A +G + A Sbjct: 280 RTLEGGCSVPIGVETEWMSSGDLRMDAIVVSLDGTRSVEDRITARVEAIDEADALGEELA 339 Query: 294 QYIRFISNKNVF 305 + + Sbjct: 340 GRLLEAGAGEIL 351 >gi|257063872|ref|YP_003143544.1| porphobilinogen deaminase [Slackia heliotrinireducens DSM 20476] gi|256791525|gb|ACV22195.1| porphobilinogen deaminase [Slackia heliotrinireducens DSM 20476] Length = 318 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 95/310 (30%), Positives = 141/310 (45%), Gaps = 8/310 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ F IGTR S LAL ++M P + I +T GD L EIG Sbjct: 1 MPER-FVIGTRGSKLALWQTETVGRAIMRA--FPEIEVEIRVRNTTGDINLASPLAEIGD 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK- 119 KGLFT E+E L+ GE+D VHS KD+ T+ +G ++ LPR D RDV + Sbjct: 58 KGLFTRELETDLLLGEVDMCVHSLKDLETEQPEGCVVAGVLPRADARDVLVCGPRIQAAS 117 Query: 120 --DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 ++ S IGT S RR A L ++ RG ++TR+ K + +LA AG+K Sbjct: 118 LAEVPEGSRIGTGSRRRVAQLKANFPNMVPEGIRGNVDTRVAKAEGDDYEGAILAAAGMK 177 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ E I L IED P+PGQGAI +E N +A ++ + +N T + ER L Sbjct: 178 RMGYEDHIAAYLPIEDMIPAPGQGAIAMEVLKKNERAYQIARALNDPVTKACTDAERFVL 237 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQY 295 L+G C + I + F VL+ G + D +++ + Sbjct: 238 FSLEGGCSAPIGAHCRLEDGKYIFDACVLSLGGTKAARCHLEADADSADPMDMAWEVVSE 297 Query: 296 IRFISNKNVF 305 + + + Sbjct: 298 LIGEGARAIL 307 >gi|297564830|ref|YP_003683802.1| porphobilinogen deaminase [Meiothermus silvanus DSM 9946] gi|296849279|gb|ADH62294.1| porphobilinogen deaminase [Meiothermus silvanus DSM 9946] Length = 294 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 89/305 (29%), Positives = 146/305 (47%), Gaps = 17/305 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + IGTR S LALA L + P ++ NR+ G Sbjct: 1 MRVIVIGTRGSLLALAQTRWVVERLKE--NWPEVEFRTKTIT-------NRSEDPAAG-- 49 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 ++ L EID A+H+ +D+P GL ++A R D R+ F+ +A+ L+DL Sbjct: 50 -----LQDALRKREIDIALHALRDLPPAQADGLHLTAVTRRVDPREAFVGRSAKRLEDLP 104 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+G SLRRKA LL +R D+ V + +G ++ +L L + AI++ + RL Sbjct: 105 DGAVVGAPSLRRKAQLLAYRPDLVVRETKGDVDDQLEALGTGEYDAIIMPAGSLLRLDLR 164 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + ++ E P+PGQGA+ +E + + A+EL +NH + D V ERAF+A L Sbjct: 165 NRIDQFVDPEILLPAPGQGALGLEVRLGDDYAEELAYSLNHRPSSDRVCAERAFVAALGV 224 Query: 243 SCKSAIAGFAYCKGS-TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 ++ +A A+ + TL G V + DG+ G+ +A+ +G + AQ + Sbjct: 225 GLEAPVAALAFVEDDGTLRLEGGVFSPDGREMIRGEIEGDASEAVELGSELAQDLLAEGG 284 Query: 302 KNVFN 306 K + Sbjct: 285 KEILE 289 >gi|327400408|ref|YP_004341247.1| Porphobilinogen deaminase [Archaeoglobus veneficus SNP6] gi|327315916|gb|AEA46532.1| Porphobilinogen deaminase [Archaeoglobus veneficus SNP6] Length = 296 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 104/299 (34%), Positives = 151/299 (50%), Gaps = 11/299 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +GTR S LALA + + L + + I + T GD + +R L E G G F Sbjct: 4 KIVVGTRGSKLALAQTEKVIAHLKA----EGYEVEIRIIKTPGDIMKDRPLHEFKGMGAF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 I++ L+ G+ID AVHS KD+P+K+ + A L RE D F++ ++ +L + Sbjct: 60 VRVIDEALVDGDIDIAVHSYKDVPSKINGVIA--AVLERESPCDAFVTREGLTIDELESY 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEK 183 SV+GTSSLRR+A + R+R D+ + + RG ++TRL KL + AILLA AG+ RL EK Sbjct: 118 SVVGTSSLRRRAQIKRYRPDLKIENLRGNVDTRLRKLREKQYDAILLAEAGLIRLGLNEK 177 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V + LN E F PS QG I +ET ++LV +NH+ T ERA L EL Sbjct: 178 VRYQSLNPEIFVPSANQGIIAVET---RKGEEDLVSFMNHKRTAVEAEVERAVLKELGVG 234 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C + +A + Y VL+ DG V + AI A+ ++ Sbjct: 235 CAVPVGIYAKF-DGKIRLYCEVLSHDGSRAVRVEETLSPKTAIEEAIIIARELKKECGG 292 >gi|169762720|ref|XP_001727260.1| porphobilinogen deaminase [Aspergillus oryzae RIB40] gi|83770288|dbj|BAE60421.1| unnamed protein product [Aspergillus oryzae] Length = 330 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 101/313 (32%), Positives = 157/313 (50%), Gaps = 13/313 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA+ A R+ L + P + I L T GDR L G K L+ Sbjct: 10 PLRIGTRRSNLAMVQAEGIRNCLQKI--APDRSFEIEALRTLGDRDQLTALYNFGAKSLW 67 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T E+E+KL +GE+D VH KDMPT L +++A PR+D RD I SLK L Sbjct: 68 TTELEEKLNAGELDVIVHCLKDMPTSLPDSCELAAIPPRDDPRDALIVKAGLPYTSLKSL 127 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRL 179 +V+GTSS+RR A L R + + RG +ETRL K++N+ + ++++ AG++R+ Sbjct: 128 PEGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDNSDSEYTCMVMSAAGLERV 187 Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 E I + L +D + GQGA+ +E + K QEL+ + + + + ER+ + Sbjct: 188 GLEHRISQYLGSKDGGILHAVGQGALGLEIRKGDRKMQELLGQLADQQSTLACLAERSLM 247 Query: 238 AELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAA 293 L+G C + I + L + IV++ DG E + N +A +G++ A Sbjct: 248 RTLEGGCSAPIGVETEWISAGALSIHAIVVSLDGTKSVEDTIVSNVKTVEEATALGKELA 307 Query: 294 QYIRFISNKNVFN 306 + + N Sbjct: 308 ARLVKAGAGEILN 320 >gi|109947886|ref|YP_665114.1| porphobilinogen deaminase [Helicobacter acinonychis str. Sheeba] gi|123066146|sp|Q17W61|HEM3_HELAH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|109715107|emb|CAK00115.1| hemC [Helicobacter acinonychis str. Sheeba] Length = 306 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 94/303 (31%), Positives = 151/303 (49%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IG+R S LAL A + L I + T GD+I + L +IGGKGLF Sbjct: 3 KLVIGSRGSELALWQANYIKERLKKECF---IESEIQIVKTTGDKILDAPLNKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ L+ G ID AVHS KD+P KGL ++ R D+RD F+S L L Sbjct: 60 TKELEELLLKGTIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSTKFPDLMSLPKG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183 + +GT+SLRR L R D+ RG ++TRL KL + + AI+LA AG+ RL + Sbjct: 120 AKVGTTSLRRSMQLKCKRKDLDTESLRGNVQTRLKKLESGEFDAIILAEAGLCRLNIQGA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ ++E+ PS GQGA+ +E ++ L + +N E++ + ER F+ L+G Sbjct: 180 KYRKAFSVEEMIPSMGQGALGVEMLKSHKHFTAL-QKLNDEESAFCCHLEREFIKGLNGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ + A G + I+ +G+ + G++ A + ++ + + Sbjct: 239 CQIPVGVHASLMGEKVKIQAILGLPNGEEVIAKEKQGDKNKAFDSVQELLEAFLQSGARE 298 Query: 304 VFN 306 + Sbjct: 299 ILE 301 >gi|220928704|ref|YP_002505613.1| porphobilinogen deaminase [Clostridium cellulolyticum H10] gi|254800245|sp|B8I0Q8|HEM3_CLOCE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|219999032|gb|ACL75633.1| porphobilinogen deaminase [Clostridium cellulolyticum H10] Length = 293 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 88/294 (29%), Positives = 151/294 (51%), Gaps = 7/294 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RIG+R S LA+ + +++ + P + +I + T GD+I ++TL +IGGKG Sbjct: 1 MKKIRIGSRDSKLAIIQSEMVMAAIREF--DPDIELELITMKTTGDKILDKTLDKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E++ L + E+D VHS KDMP + L + A RED RD F+ + Sbjct: 59 LFVKELDYALYNNEVDITVHSYKDMPLEDNPKLPVVALSKREDPRDAFVLPQGEIA---E 115 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IG+SS RR+ L + RG ++TRL KL++ + AI+LA AGIKRL E Sbjct: 116 NNEPIGSSSQRRQLQLKALFPNRKTAPIRGNVQTRLKKLDSGEFSAIVLAAAGIKRLGLE 175 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I ++++ P+ QG I ++ + + +K+ + E++ ER F+ E++G Sbjct: 176 SRISRYFSVDEILPAASQGIIAVQGRAG--ENFDFLKLFHSEESLCISQAERTFVREMNG 233 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C + IA +A S + G+ + +G+R + + +G + + + Sbjct: 234 GCSTPIAAYATIVESEIILKGLYHNEATGESKKECVSGSRQNPVELGYELVKKM 287 >gi|150024157|ref|YP_001294983.1| hydroxymethylbilane synthase [Flavobacterium psychrophilum JIP02/86] gi|149770698|emb|CAL42162.1| Hydroxymethylbilane synthase [Flavobacterium psychrophilum JIP02/86] Length = 308 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 94/303 (31%), Positives = 157/303 (51%), Gaps = 10/303 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M KK +IGTR S LAL A L D+ H II + ++GD I ++ L E+G Sbjct: 1 MAKKTIKIGTRDSELALWQAHHVEKMLNDL----GHKTKIIAVKSQGDIILDKPLYELGI 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ +++G+ID AVHS KD+PT L +G+ +A L R + +D+ + + + Sbjct: 57 TGIFTKTLDIAMVNGDIDIAVHSMKDVPTALPQGIVQAAVLERANEKDILVYNNNLDFLN 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + I T SLRR+A L + V+D RG + TR+ KL +N + + A AG++R+ Sbjct: 117 TQ--ATIATGSLRRQAQWLHKYPNHKVVDLRGNVNTRMQKLQDNNWNGAVFAAAGLERIN 174 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + +N++ P+P QGA+ + N+ + + +NH +T + ER FL L Sbjct: 175 IKPEN--YINLDWMIPAPAQGAMMVVAMGNDTYCLDALAELNHIETEITTYIERQFLRTL 232 Query: 241 DGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +G C + I +A K T++F G++ + DG E+ + + +G A Q I Sbjct: 233 EGGCTAPIGAYARFNEKDETIHFQGVLFSLDGSQKIEIKKIVEIQEWKQLGYHAGQEIFE 292 Query: 299 ISN 301 Sbjct: 293 NGG 295 >gi|330993440|ref|ZP_08317375.1| Porphobilinogen deaminase [Gluconacetobacter sp. SXCC-1] gi|329759470|gb|EGG75979.1| Porphobilinogen deaminase [Gluconacetobacter sp. SXCC-1] Length = 360 Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 114/316 (36%), Positives = 163/316 (51%), Gaps = 15/316 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGGKG 62 P ++GTR SPLAL + L + +ST GD++ NR L EIGGKG Sbjct: 41 PLKVGTRASPLALVQTRAFLTVLTRFCPVLRDMGAFQEHQISTTGDQVQNRKLAEIGGKG 100 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL- 121 LF +EI + L+ G ID AVHS KD+ T L GL ++ L RED RDV I D Sbjct: 101 LFAKEIHEALLDGRIDFAVHSLKDLETTLPPGLVLACTLKREDARDVLILGPGCGEPDPA 160 Query: 122 ------ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 +++G +S+RR+A +L R D+ RG ++TRL+KL + A LLAYAG Sbjct: 161 DPYSVLPQGALVGCASVRRQAQMLHVRPDLKFGLLRGNVQTRLDKLAARQCDATLLAYAG 220 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 ++RL E IL+ P+ GQG + + ++ + +EL+ I + ERA Sbjct: 221 LRRLGMEDRADVILDPTIMVPAAGQGIVGVTVRESDVELRELLSAIEDYEARAVATAERA 280 Query: 236 FLAELDGSCKSAIAGFAY----CKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 LAELDGSC++ I G+A G L+ G+V DG + S +G DA +G Sbjct: 281 LLAELDGSCRTPIGGYARLIPVVAGGAPELHLTGLVAREDGSFLLKRSISGAPADAARLG 340 Query: 290 RDAAQYIRFISNKNVF 305 RD + +R S ++F Sbjct: 341 RDLGRSLRADSPADIF 356 >gi|91218004|ref|ZP_01254956.1| porphobilinogen deaminase [Psychroflexus torquis ATCC 700755] gi|91183862|gb|EAS70253.1| porphobilinogen deaminase [Psychroflexus torquis ATCC 700755] Length = 302 Score = 215 bits (547), Expect = 7e-54, Method: Composition-based stats. Identities = 94/304 (30%), Positives = 151/304 (49%), Gaps = 10/304 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K IGTR S LA+ A + ++ L + ++ ++ P+ + GD ++ L E+G Sbjct: 1 MS-KTISIGTRDSELAMWQAHKVKTLLENQ----GYSTILKPVKSTGDLNLDQPLYEMGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ L+ GEID AVHS KD+PT L KG+ A LPR + D+ + L Sbjct: 56 TGIFTKTLDVALVKGEIDIAVHSMKDVPTALPKGVVQGAVLPRANTSDILLHKGLSFL-- 113 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 I T SLRRKA LR V + RG + TRL KL N+ + + A AG++R+ Sbjct: 114 -ENKGTIATGSLRRKAQWLRKYPQHKVENLRGNVNTRLQKLQNHDWNGAIFAAAGLERIN 172 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + ++ P+P QGA+ + T +N ++ ++ +NH DT +V ER FL L Sbjct: 173 L--KPDNHIELDWMIPAPAQGAMLVVTMEHNTVCRKALEKLNHTDTALAVRVEREFLKTL 230 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C + I A K + F + + DGK + + D G+ A+++ Sbjct: 231 EGGCTAPIGALATIKDREINFRAGLFSLDGKQTFTIHEVISIDDVEGFGKRCAEHVLKQG 290 Query: 301 NKNV 304 + Sbjct: 291 GGKL 294 >gi|50557014|ref|XP_505915.1| YALI0F26609p [Yarrowia lipolytica] gi|55976378|sp|Q6C097|HEM3_YARLI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|49651785|emb|CAG78727.1| YALI0F26609p [Yarrowia lipolytica] Length = 338 Score = 215 bits (547), Expect = 7e-54, Method: Composition-based stats. Identities = 95/315 (30%), Positives = 154/315 (48%), Gaps = 15/315 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +G R S LAL + L VH P ++ ++ L+T GD++ ++ L GK L+ Sbjct: 18 KVFVGGRKSKLALVQTQHVAAMLKKVH--PDYSFPVLGLTTLGDQVQSKPLYSFDGKALW 75 Query: 65 TEEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQ 116 T+E+E L+ + D VHS KDMPT L G ++ A L RED RD + + Sbjct: 76 TKELETLLLEKVPGFDQQDIIVHSLKDMPTVLPDGCELGAILTREDPRDALVMAAGSPYK 135 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYA 174 +L DL SV+GTSS+RR A L + + RG + TRL+KL++ ++LA A Sbjct: 136 TLADLPAGSVVGTSSIRRSAQLKKSYPGLVYESVRGNVGTRLSKLDDPETPYKCLILAAA 195 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G+KRL I L D + GQGA+ +E + K +++++ I +++ ER Sbjct: 196 GLKRLDLGDRITGYLQKPDMLHAVGQGALGLEIRQGDEKTKKILEAIYDKESTLCCLAER 255 Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRD 291 A + L+G C I + L IV++ +G F E ++ +A +G+D Sbjct: 256 AVMRTLEGGCSVPIGVETKYENGKLTLDAIVVSVEGTEFVECTQVRAVEENWEAEQLGKD 315 Query: 292 AAQYIRFISNKNVFN 306 A+ + K + + Sbjct: 316 VAEQLVKDGAKKILD 330 >gi|326388534|ref|ZP_08210128.1| porphobilinogen deaminase [Novosphingobium nitrogenifigens DSM 19370] gi|326206999|gb|EGD57822.1| porphobilinogen deaminase [Novosphingobium nitrogenifigens DSM 19370] Length = 309 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 111/281 (39%), Positives = 154/281 (54%), Gaps = 4/281 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR SPLA+A A ETR+ L H P + ++P+ GDRI +R L EIGGK L+T Sbjct: 1 MRLGTRQSPLAMAQAEETRARLCAAHGWPVDAVELVPVVASGDRIQDRPLAEIGGKALWT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ L G ID AVHS KD+ T + L I+A LPR D+RDV + A S+ D+ + Sbjct: 61 KELDAWLAEGTIDAAVHSMKDVETLRPETLTIAAVLPRADVRDVLV--GAASVADIPTGA 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTS+ RR A +L R D++V+ FRG + TRL KL +A LLA AG+ RL + + Sbjct: 119 RVGTSAPRRAAQMLHARPDLTVVSFRGNVATRLGKLERGEADVTLLAAAGLVRLGETGIG 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ E + P+P QGAI IE L I+ T ++ ERA L L G+C Sbjct: 179 T-PLDAETWLPAPAQGAIGIECLAARADLLSLFAAIDDAPTHAAIRAERALLTGLGGTCH 237 Query: 246 SAIAGFAYCKGST-LYFYGIVLASDGKIFHEVSRNGNRCDA 285 S IA +G T L+ + + DG E S + Sbjct: 238 SPIAVLTRPEGDTELFLRAALFSPDGAHRVEASATFPMTEP 278 >gi|253582657|ref|ZP_04859878.1| uroporphyrinogen III synthase/methyltransferase [Fusobacterium varium ATCC 27725] gi|251835527|gb|EES64067.1| uroporphyrinogen III synthase/methyltransferase [Fusobacterium varium ATCC 27725] Length = 306 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 110/303 (36%), Positives = 153/303 (50%), Gaps = 6/303 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIG 59 K+ IGTR S LA+A + + L + P I + T GD N ++ Sbjct: 8 MKRKIVIGTRGSILAMAQSEMIKKMLE--NNFPELEFEIKKIVTSGDTDLVSNWNNSDKS 65 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 K FT+EIE +L++G ID AVHS KDMP +GL A RED RDV IS + ++L Sbjct: 66 LKSFFTKEIEVELLNGTIDLAVHSMKDMPVVSPEGLICGAVPDREDSRDVLISKSGKTLM 125 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +VIGTSSLRR L RSD+ + RG I TRLNKL AILLA AG+KR+ Sbjct: 126 ELPKGAVIGTSSLRRTMNLKNLRSDLKIKQLRGNIHTRLNKLKTENYDAILLAAAGLKRV 185 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E I E L+ E F P+P QG + I+ N+ + +E++K I+++D V ER F Sbjct: 186 GLENEITEYLDPEKFLPAPAQGVLHIQCRENDEEIKEILKSIHNKDMEKIVVIEREFSKI 245 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DG C + + G + G+ G+ + S + I I + A I+ Sbjct: 246 FDGGCHTPMGCHCILNGDKITLTGVYF--KGETGYSASITEDAALGIKIAQKLADIIKEK 303 Query: 300 SNK 302 N Sbjct: 304 IND 306 >gi|255949632|ref|XP_002565583.1| Pc22g16690 [Penicillium chrysogenum Wisconsin 54-1255] gi|211592600|emb|CAP98957.1| Pc22g16690 [Penicillium chrysogenum Wisconsin 54-1255] Length = 330 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 13/312 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA+ A R SL + P + I L T GDR L + G K L+ Sbjct: 10 PLRIGTRRSNLAVVQAEGIRDSLKRI--APERSYEIETLRTLGDRDQLTALYDFGAKSLW 67 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T E+E+KL+SGE+D VH KDMPT L +++A PR+D RD I S+K+L Sbjct: 68 TTELEEKLVSGELDVIVHCLKDMPTTLPDTCELAAIPPRDDPRDALIVKSSLPYTSIKEL 127 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIKRL 179 +V+GTSS+RR A L R + + RG +ETRL KL+N ++ ++++ AG++R+ Sbjct: 128 PKGAVVGTSSVRRSAQLRRLYPYLRFANIRGNVETRLAKLDNPASEYTCMVMSAAGLERV 187 Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 ++ I + L +D + GQGA+ +E + K QEL+ + + + ER+ + Sbjct: 188 GRKFRINQYLCSKDGGIFHAVGQGALGLEIRKGDTKTQELLDQLADRKSTLACLAERSLM 247 Query: 238 AELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAA 293 L+G C I + + L +V++ DG E S +A +G+ A Sbjct: 248 RTLEGGCSVPIGVETEWIRSDVLKITALVVSLDGSESVEDSLEARVQTVDEATELGKKIA 307 Query: 294 QYIRFISNKNVF 305 + + + Sbjct: 308 ARLVKAGAEAIL 319 >gi|317123819|ref|YP_004097931.1| hydroxymethylbilane synthase [Intrasporangium calvum DSM 43043] gi|315587907|gb|ADU47204.1| hydroxymethylbilane synthase [Intrasporangium calvum DSM 43043] Length = 316 Score = 215 bits (546), Expect = 9e-54, Method: Composition-based stats. Identities = 100/303 (33%), Positives = 152/303 (50%), Gaps = 9/303 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA + L H++ ++ ++T+GD ++ LT IGG G+F Sbjct: 4 LRLGTRRSALATTQSGWVADQLRAA----GHDVELVEITTEGD-VSGGLLTAIGGTGVFA 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 I K L G +D AVHS KD+PT GL ++A RED RDV ++ +L +L + S Sbjct: 59 AAIRKALTDGRVDVAVHSLKDLPTAPEPGLVVAAVPAREDSRDVLVARDGLTLGELPIGS 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GT S RR A L + + RG ++TRL +++ + A++LA AG+ RL + V+ Sbjct: 119 VVGTGSPRRTAQLAALGLGLEIRPIRGNVDTRLRLVSSGEVDAVILARAGLARLGRLDVV 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L+ P+PGQGA+ +E + P E V V+ DT S+ ERA LA L+ C Sbjct: 179 TEVLDPIQVLPAPGQGALAVECRADRPDVLEAVSVLEDADTRASITAERALLAALEAGCT 238 Query: 246 SAIAGFAYCKGS----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 + + A L DG+I S G D ++GR AQ + Sbjct: 239 APVGALAEVVDGEEGLELSLRAFAGTEDGRIDLRRSLTGRYDDPESLGRRLAQILLEDGA 298 Query: 302 KNV 304 ++ Sbjct: 299 ADL 301 >gi|29827579|ref|NP_822213.1| porphobilinogen deaminase [Streptomyces avermitilis MA-4680] gi|39931490|sp|Q82P95|HEM32_STRAW RecName: Full=Porphobilinogen deaminase 2; Short=PBG 2; AltName: Full=Hydroxymethylbilane synthase 2; Short=HMBS 2; AltName: Full=Pre-uroporphyrinogen synthase 2 gi|29604679|dbj|BAC68748.1| putative porphobilinogen deaminase [Streptomyces avermitilis MA-4680] Length = 314 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 98/304 (32%), Positives = 146/304 (48%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L +H P ++ + T GD+ L+++ GKG FT Sbjct: 10 IRIVSRDSPMALAQVARVRAELAALH--PRTRTEVVAVKTTGDKWMG-DLSKVDGKGAFT 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +A+L R+DIRD + +L +L Sbjct: 67 KEVDAALLAGEADLAVHCVKDVPADRPLPAGTMFAAFLKRDDIRDALVHPGGLTLDELPP 126 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSS+RR A L + + FRG RL KL +A A+LLA +G++R+ +E Sbjct: 127 GTRIGTSSVRRVAQLAAAYPHLECVPFRGNANRRLEKLAAGEADALLLAVSGLERIGRED 186 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI E+L E P G G + ++ + E + + T ER FL L G Sbjct: 187 VITEVLEPETMMPPIGAGILALQCREGDTGLIETISELGDPGTHREATAERMFLHVLQGH 246 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG+A + L V DGK R D +G A + + Sbjct: 247 CNSPIAGYARTERNGELSLRASVFTLDGKTVLNAHEWAGRLDPATLGTSVAVALLRQGAR 306 Query: 303 NVFN 306 + + Sbjct: 307 ELID 310 >gi|157825828|ref|YP_001493548.1| porphobilinogen deaminase [Rickettsia akari str. Hartford] gi|166217781|sp|A8GNR5|HEM3_RICAH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157799786|gb|ABV75040.1| porphobilinogen deaminase [Rickettsia akari str. Hartford] Length = 301 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 109/298 (36%), Positives = 158/298 (53%), Gaps = 4/298 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLAL + P N I+P+ T GD I N+ L +IGGK L Sbjct: 3 NSIRIGTRNSPLALIQTNLVIQQIKQF--FPDINCAIVPIITSGDLIQNKPLYDIGGKAL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+ +ID AVHS KD+P ++ + L ISA L RED RDVF+ +S+K+L Sbjct: 61 FLKEIEQALLDKKIDLAVHSLKDVPGRIPEELVISAVLEREDPRDVFVCLNYKSIKELPQ 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KE 182 HSVIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAYAG+KRL Sbjct: 121 HSVIGSSAVRRKAFIQKIRPDLKVTIFRGNVDSRIKKLMTGEVDATILAYAGLKRLGAFN 180 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 ++ P GQG I +E N+ E+ INH T + + ERAFL LD Sbjct: 181 PEYCHLIEYSHMLPCVGQGVIAVEIRQNDNSMLEICNQINHLPTCELIKPERAFLEYLDA 240 Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +C++ I ++ Y + ++ D + N + G AA+ + Sbjct: 241 NCRTPIGTYSQYLDADNIQTDFMLGNPDCSKITFHTEITNIKTSKEGGIKAAKMMLNQ 298 >gi|145220672|ref|YP_001131350.1| porphobilinogen deaminase [Mycobacterium gilvum PYR-GCK] gi|315442377|ref|YP_004075256.1| hydroxymethylbilane synthase [Mycobacterium sp. Spyr1] gi|189028094|sp|A4T340|HEM3_MYCGI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|145213158|gb|ABP42562.1| hydroxymethylbilane synthase [Mycobacterium gilvum PYR-GCK] gi|315260680|gb|ADT97421.1| hydroxymethylbilane synthase [Mycobacterium sp. Spyr1] Length = 312 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 95/310 (30%), Positives = 151/310 (48%), Gaps = 14/310 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H+ ++ +ST+GDR + + +IG G+FT Sbjct: 2 IRIGTRGSLLATTQAGTIRDALIAA----GHDAELVIISTEGDRRADEPIADIG-VGVFT 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + +D AVHS KD+PT + I+A RED RD ++ L +L S Sbjct: 57 AALREAIADNVVDAAVHSYKDLPTAVDPRFMIAATPVREDARDALVARDGMVLGELPAGS 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS RR A L + + RG ++TRLN++++ + AI++A AG+ R+ + +V+ Sbjct: 117 VIGTSSPRRVAQLKALGLGLEIRPLRGNLDTRLNRVSSGELDAIVVAKAGLSRIGRLEVV 176 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ IE + +L+ ++ DT +V ER LAEL+ C Sbjct: 177 TETLEPVQMLPAPAQGALAIECRAGDTALAQLLAELDDADTRAAVTAERTLLAELEAGCS 236 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V DG S G+ A +G A + Sbjct: 237 APVGAIAEVVESIDEDGRVFEELSLRGCVATLDGSDVIRASGIGSPDRARELGLSVAAEL 296 Query: 297 RFISNKNVFN 306 + +++ + Sbjct: 297 FDLGARDLLD 306 >gi|269119644|ref|YP_003307821.1| porphobilinogen deaminase [Sebaldella termitidis ATCC 33386] gi|268613522|gb|ACZ07890.1| porphobilinogen deaminase [Sebaldella termitidis ATCC 33386] Length = 297 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 100/301 (33%), Positives = 153/301 (50%), Gaps = 5/301 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-LTEIGGK 61 + +GTR S LA+A A + L++ KIP + I + T GDR + K Sbjct: 1 MRKIVMGTRGSVLAVAQAETVKKMLIE--KIPGLTVEIKKIVTSGDRDQTTNWGGDSSLK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 +F +EIE++L+ G ID AVHS KDMP +GL + + RED RDV +S ++ Sbjct: 59 SMFVKEIERELLEGTIDFAVHSMKDMPQISPEGLINACFPIREDNRDVLVSKNNTVFSEM 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SVIGTSSLRRK+ + ++ + RG I TRL KL++ + I+LA AG+ R Sbjct: 119 PSGSVIGTSSLRRKSAVTELYPEMEIKPIRGNIHTRLGKLDSGEYDGIILAAAGLIRTGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E I E ++ E PP+P QG +C++ NN + E++K I+ +T ER F D Sbjct: 179 ESRISEYIDPEKMPPAPAQGILCVQCRENNMEILEILKEIDDRETRIICEAEREFSRIFD 238 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C + + FA K ++ G+ + G+ + G+ + A+ IR N Sbjct: 239 GGCHTPMGCFAVIKEEEIFLKGMFCS--GEKMYFGEAGGSIEKPKEAAQKLAEIIRRQIN 296 Query: 302 K 302 + Sbjct: 297 E 297 >gi|229490699|ref|ZP_04384537.1| porphobilinogen deaminase [Rhodococcus erythropolis SK121] gi|229322519|gb|EEN88302.1| porphobilinogen deaminase [Rhodococcus erythropolis SK121] Length = 324 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 92/311 (29%), Positives = 145/311 (46%), Gaps = 15/311 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA A R +L+ H ++ + TKGD+ T+ + +IG G+F Sbjct: 11 PLRIGTRGSLLATTQAGTVRDALIAA----GHPAELVIIKTKGDQSTD-PVQKIG-VGVF 64 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T E+ + L+ +D AVHS KD+PT I+A PRED RD ++ L +L Sbjct: 65 TAELREALVDNRVDVAVHSYKDLPTAQDPRFVIAAIPPREDPRDALVARDGLVLGELPAG 124 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S +GTS+ RR + L + ++ RG ++ RL K+ + + A++LA AG+ R+ + Sbjct: 125 SKVGTSAPRRVSQLKALGLGLDIVPLRGNLQRRLGKVESGELDAVILARAGLSRIGLLDL 184 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E + P+P QGA+ +E N + ++ + T +V ERA LA L+ C Sbjct: 185 ITENIEPVQMLPAPAQGALAVECLSANAELAAILAEHDDAGTRAAVTAERALLAGLEAGC 244 Query: 245 KSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 + + A L G A DG G A +GR A+ Sbjct: 245 TAPVGAIAEIVESLDDDGRIFDELSVRGCAAAIDGSDVIRTGAVGAPDKAEELGRAVARE 304 Query: 296 IRFISNKNVFN 306 + + + + N Sbjct: 305 LLELGARELMN 315 >gi|215272308|ref|NP_001135813.1| hydroxymethylbilane synthase [Nasonia vitripennis] Length = 356 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 113/342 (33%), Positives = 163/342 (47%), Gaps = 41/342 (11%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+ FR+G+R S LAL L D++ P I+ +STKGD+I N +L +IG K Sbjct: 5 EQNVFRVGSRKSELALIQTEYVIKCLKDLN--PDKEFKIVTMSTKGDKILNISLPKIGEK 62 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 LFTEE+E L + +D VHS KD+PT L +GL + A L RED RD + A S L Sbjct: 63 SLFTEELENALENNRVDFLVHSLKDLPTTLREGLALGAILEREDPRDAVVMSKAFSAFTL 122 Query: 122 ---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176 SVIGTSSLRR A L R + V + RG + TR KL++ AI+LA AG+ Sbjct: 123 DTLPPGSVIGTSSLRRSAYLARNMPHLKVENIRGNLNTRFKKLDDEKGAYAAIILAVAGL 182 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 KR+ E I + L+ E+ GQGA+ +E +P+ L++ +NH T ER+F Sbjct: 183 KRMGLENRISQYLDSEETLYCVGQGALAVECREVDPRVLSLLEPLNHFHTTLRCVAERSF 242 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR----CD-------- 284 L L G C + + + + L G VL+ +GK+ + + D Sbjct: 243 LKYLGGGCSAPVGVSSTLENKELKITGAVLSLNGKVLIKDTLKCKLYMPSDDGEPPKKCP 302 Query: 285 ----------------------AINIGRDAAQYIRFISNKNV 304 A +G+D A+ + + V Sbjct: 303 YREPRTYCGTVPGNMNAISLFGAEQLGKDIAESLIKQNALEV 344 >gi|302381524|ref|YP_003817347.1| porphobilinogen deaminase [Brevundimonas subvibrioides ATCC 15264] gi|302192152|gb|ADK99723.1| porphobilinogen deaminase [Brevundimonas subvibrioides ATCC 15264] Length = 315 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 106/310 (34%), Positives = 161/310 (51%), Gaps = 12/310 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LALA + + ++ ++P +V++ + T GD+I +R L E+GGK LF Sbjct: 3 TIRIGTRRSALALAQSGMMQRAIAAAMQLPIEEVVLVEIVTTGDQIQDRRLMEVGGKALF 62 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+EIE+ L+ G +D AVHS KD+P + GL I+A RED RD FIS L+ L Sbjct: 63 TKEIEEALLDGRVDIAVHSMKDVPAEQPPGLTIAAIPEREDARDAFISRDFDELEHLPHG 122 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +GT+SLRR+A L R D+ + RG I+TRL + AILLA +G+ RL + Sbjct: 123 GRLGTASLRRQAQALALRPDLQIEMLRGNIDTRLRRAAEGDFDAILLAASGLNRLGRSDA 182 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ L+++ F P+PGQGA+ ++T V+ +NH T V ER + L+GSC Sbjct: 183 VRGFLSVDAFLPAPGQGALALQTR-EGDTDHAWVQAMNHGPTALCVAAERGAMVALEGSC 241 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR-----------CDAINIGRDAA 293 ++A+ A+ G L +LA DG + +A ++G Sbjct: 242 RTAVGAHAHIDGDRLTLTTEMLAPDGTARWRRAGEITLITAPDAPGRAMDNARDLGLRLG 301 Query: 294 QYIRFISNKN 303 + + Sbjct: 302 HEVHAAAGDQ 311 >gi|190345502|gb|EDK37399.2| hypothetical protein PGUG_01497 [Meyerozyma guilliermondii ATCC 6260] Length = 371 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 94/319 (29%), Positives = 154/319 (48%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K +IG R S LA+A + + L+ K P I+ LST GD+I ++ L GGK Sbjct: 8 TTKHIQIGGRKSTLAVAQSNIVKKHLVA--KFPQLKCSILALSTLGDQIQSQPLYSFGGK 65 Query: 62 GLFTEEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-- 114 L+T+E+E L+ ++D VHS KD+PT L + ++ L R D RDV + Sbjct: 66 ALWTKELETLLMQAIGGLPQLDMIVHSLKDVPTNLPEEFELGCILDRSDPRDVLVMRKGS 125 Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILL 171 +SL +L +++GTSS+RR + L++ + RG I TR+ KL+ +LL Sbjct: 126 KYKSLAELPAGTMVGTSSVRRSSQLMKNYPHLRFDSARGNINTRVQKLDAEDSPFECLLL 185 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG++R+ + I L+ D + GQGA+ +E + + ++L++ I T + Sbjct: 186 AAAGLQRVGLDHRITTYLDAPDMYYAVGQGALGVEIRKGDEQIKQLLQAIEDVPTSLCCH 245 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGN---RCDAI 286 ER+ + L+G C I +T L F IV++ DG F E + +A Sbjct: 246 AERSLMRYLEGGCSVPIGVHTDYDKTTQVLKFNAIVVSPDGNEFVEDKIEMKVTTKSEAD 305 Query: 287 NIGRDAAQYIRFISNKNVF 305 +G+ + K + Sbjct: 306 ALGQQLGDKLIAKGAKEIL 324 >gi|46130844|ref|XP_389153.1| hypothetical protein FG08977.1 [Gibberella zeae PH-1] Length = 335 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 100/312 (32%), Positives = 151/312 (48%), Gaps = 15/312 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR SPLALA +L + P H+ I ++T GDR N L GGKGL+T + Sbjct: 13 VGTRKSPLALAQTQIVVDALKQ--RFPDHDFPIHSMTTTGDRDQNTALYNFGGKGLWTSQ 70 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-------HTAQSLKD 120 +E++L++ E+D VHS KDMPT L +G + RED RD + H ++L D Sbjct: 71 LEERLVNRELDIVVHSLKDMPTVLPEGCVLGCVTSREDPRDTLVIKKELQDKHGWKTLAD 130 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-HAILLAYAGIKRL 179 L S+IGTSS+RR A L+R + D RG I+TRL KL + I+LA AG++R+ Sbjct: 131 LPAGSIIGTSSVRRIAQLVRRYPTLKFKDHRGNIQTRLRKLEEDPDLTGIILAAAGLQRM 190 Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 I + L E+ + GQGA+ +E ++ K +K I +E T + ERA + Sbjct: 191 DLGHHITQFLESENGGILYAVGQGALGVECRGDDEKVLGFLKTIENEQTALACEAERALM 250 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDAAQ 294 L+G C I L V++ G + +A G+ A+ Sbjct: 251 RALEGGCSVPIGVETKWIDDKLRMKATVVSLRGDEGVDCEIAEAIKTHDEADKFGKKVAE 310 Query: 295 YIRFISNKNVFN 306 + + + + Sbjct: 311 TLVEQGAQKILD 322 >gi|58040313|ref|YP_192277.1| porphobilinogen deaminase [Gluconobacter oxydans 621H] gi|58002727|gb|AAW61621.1| Porphobilinogen deaminase [Gluconobacter oxydans 621H] Length = 357 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 106/313 (33%), Positives = 158/313 (50%), Gaps = 9/313 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGG 60 K P R+G+R SPLAL + L + +ST+GDR + L EIGG Sbjct: 40 KLPLRVGSRASPLALVQTRNFLTRLTRFCPVLRDMGAFQEYQISTEGDRNLVQRLAEIGG 99 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EI + L +G ID AVHS KD+ T L GL ++ L RED RD I D Sbjct: 100 KGLFAKEIHEALAAGRIDFAVHSLKDLETNLPPGLVLACTLKREDARDALILRDRDVKVD 159 Query: 121 LAL-------HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173 ++IG +S+RR+A +L R D+ RG ++TRL+KL A LLA Sbjct: 160 PQRPYDCLPEGALIGCASVRRQAQMLHVRPDLRFCLLRGNVQTRLDKLRAGACEATLLAL 219 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG++RL E + +L + P+ GQG + + ++ + +EL+ I + E Sbjct: 220 AGLRRLGMEDRVDVVLEPDQMLPASGQGIVGVTVRESDLELRELLSAIEDPEARAVSTAE 279 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 RA LAELDGSC++ I G+A + L G++ + DG G +A +G + A Sbjct: 280 RALLAELDGSCRTPIGGYARIENGVLKLSGMIASEDGTFLLRREIEGAPLEAARLGTELA 339 Query: 294 QYIRFISNKNVFN 306 +R + ++F+ Sbjct: 340 DELRRDTPAHIFD 352 >gi|38233015|ref|NP_938782.1| porphobilinogen deaminase [Corynebacterium diphtheriae NCTC 13129] gi|55976429|sp|Q6NJK0|HEM3_CORDI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|38199274|emb|CAE48905.1| Porphobilinogen deaminase [Corynebacterium diphtheriae] Length = 294 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 84/301 (27%), Positives = 142/301 (47%), Gaps = 9/301 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IGTR S LA + R L P+ ++ ++T GD + IG G+F Sbjct: 2 TLKIGTRGSLLATTQSGHVRDDLR------PYEAELVIVTTHGDVNM-APVERIG-VGVF 53 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+ + ++L +G D AVHS KD+PT+L + R D RD I+ SL DL Sbjct: 54 TQALREELHTGGCDIAVHSFKDLPTELDPRFHL-VVPKRADFRDCLIARDGLSLADLPAG 112 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 ++IGT + RR + + R D+ + RG I+TR+ K+ + + A++LAYAG+ R+ + Sbjct: 113 ALIGTGAPRRISQIKALRPDVECVPLRGNIDTRMGKVTSGELDAVVLAYAGLTRVGRGDE 172 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ + +DF P+P QGA+ +E ++ A+E + I E ER L L+ C Sbjct: 173 ATQVFDPQDFLPAPAQGALAVECRADDAYAREAIDSICDEQAQVCAVTERVVLNRLEAGC 232 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A A TL V+A DG + + + + + + + + Sbjct: 233 TAPVAAHATLNDGTLTLTAAVIALDGSKVVRRELSAPVAENVALAEELTRALIADGAATI 292 Query: 305 F 305 Sbjct: 293 L 293 >gi|254390668|ref|ZP_05005882.1| porphobilinogen deaminase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294812261|ref|ZP_06770904.1| Porphobilinogen deaminase 2 [Streptomyces clavuligerus ATCC 27064] gi|326440901|ref|ZP_08215635.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064] gi|197704369|gb|EDY50181.1| porphobilinogen deaminase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294324860|gb|EFG06503.1| Porphobilinogen deaminase 2 [Streptomyces clavuligerus ATCC 27064] Length = 311 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 98/308 (31%), Positives = 146/308 (47%), Gaps = 6/308 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E + RI +R SP+ALA R+ L P ++P++T GDR L +GGK Sbjct: 3 ETEVMRIVSRSSPMALAQVERVRAELAVAR--PGVRTEVVPVTTSGDRWMG-DLAALGGK 59 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLK 119 G FT+E++ L++GE D AVH KD+P L G +A+L R+DIRD + +L Sbjct: 60 GAFTKEVDAALLAGEADLAVHCMKDVPADRPLPAGTTFAAFLRRDDIRDALVHPGGLTLD 119 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L + IGTSS+RR A L + + RG RL KL A A+LLA +G++R+ Sbjct: 120 ELPDGTRIGTSSVRRIAQLASSHPQLECVPMRGNANRRLEKLAAGDADALLLAVSGLERI 179 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + VI E+L+ + P G G + ++ + + + V + T V ER L Sbjct: 180 GRTDVISEVLSADVMCPPIGAGVLALQCREEDEETIDAVSGLGDPATHREVTAERMLLHV 239 Query: 240 LDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L G C S IAG+A + G L V DGK D +G A + Sbjct: 240 LQGHCNSPIAGYARAERGGELSLRAKVFTPDGKRVLNAHEWAGPLDPATLGTSVAVALLR 299 Query: 299 ISNKNVFN 306 + + + Sbjct: 300 QGARELID 307 >gi|226305131|ref|YP_002765089.1| porphobilinogen deaminase [Rhodococcus erythropolis PR4] gi|226184246|dbj|BAH32350.1| porphobilinogen deaminase [Rhodococcus erythropolis PR4] Length = 324 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 93/311 (29%), Positives = 146/311 (46%), Gaps = 15/311 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA A R +L+ H ++ + TKGD+ T+ + +IG G+F Sbjct: 11 PLRIGTRGSLLATTQAGTVRDALIAA----GHPAELVIIKTKGDQSTD-PVQKIG-VGVF 64 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T E+ + L+ +D AVHS KD+PT I+A PRED RD ++ L +L Sbjct: 65 TAELREALLDNRVDVAVHSYKDLPTAQDPRFVIAAIPPREDPRDALVARDGLVLGELPAG 124 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S +GTS+ RR + L + ++ RG ++ RL K+ + + A++LA AG+ R+ + Sbjct: 125 SKVGTSAPRRVSQLKALGLGLDIVPLRGNLQRRLGKVESGELDAVILARAGLSRIGLLDL 184 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E + P+P QGA+ +E N + ++ + T +V ERA LAEL+ C Sbjct: 185 ITENIEPVQMLPAPAQGALAVECLSANVELAAILAEHDDAGTRAAVTAERALLAELEAGC 244 Query: 245 KSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 + + A L G A DG G A +GR A+ Sbjct: 245 TAPVGAIAEIVESLDDDGRIFDELSVRGCAAAIDGSDVIRTGAVGAPDKAEELGRAVARE 304 Query: 296 IRFISNKNVFN 306 + + + + N Sbjct: 305 LLELGARELMN 315 >gi|320582367|gb|EFW96584.1| Phorphobilinogen deaminase [Pichia angusta DL-1] Length = 413 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 156/319 (48%), Gaps = 17/319 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 RIG+R S LA+ + + ++ P I+ LST GD++ N+ L GGK Sbjct: 79 NNTVRIGSRKSQLAVVQSEIVGIGIQKLY--PKLQTPIVKLSTLGDQVQNKPLYSFGGKS 136 Query: 63 LFTEEIEKKLIS-----GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---T 114 L+T+E+E L+ +ID VHS KDMPT L ++ L RED RD + Sbjct: 137 LWTKELEVLLLQSFGEFEQIDMIVHSLKDMPTSLPDEFELGCILQREDPRDALVMRKDSP 196 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLA 172 +SL DL SV+GTSS+RR A LL+ ++ RG + TR+NKL+ + ++LA Sbjct: 197 YKSLSDLPDGSVVGTSSVRRSAQLLKNHPNLRFKSIRGNLNTRINKLDAPDSDYACVILA 256 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 AG+ R+ I + L E+ + GQGA+ +E N+PK +++ + ++ + T Sbjct: 257 AAGLIRINMGHRITQFLGPEEMLYAVGQGALGVEIRKNDPKMKKICQRLDCKSTSIRCRA 316 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNR---CDAIN 287 ER L L+G C + ++ T LY +VL+ +G E + +A+ Sbjct: 317 ERELLRTLEGGCSVPVGVWSDYNKDTHELYMKSVVLSVEGTQSVEKTLIRKVENFEEAVA 376 Query: 288 IGRDAAQYIRFISNKNVFN 306 G + A + K + + Sbjct: 377 FGHELALLLINGGAKAILD 395 >gi|317013683|gb|ADU81119.1| porphobilinogen deaminase [Helicobacter pylori Gambia94/24] Length = 306 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 97/303 (32%), Positives = 152/303 (50%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IG+R S LAL A + L I + T GD+I + L +IGGKGLF Sbjct: 3 KLVIGSRGSELALWQANHIKERLKKECS---MESEIQIVKTTGDKILDAPLNKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L Sbjct: 60 TKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KEK 183 + +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL + Sbjct: 120 AKVGTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLNVQGA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ ++E+ PS GQGA+ +E N+ L + +N E++ + ER F+ L+G Sbjct: 180 KYRKAFSVEEMIPSMGQGALGVEMLKNHKHFITL-QKLNDEESAFCCHLEREFIKGLNGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I A G + ++ +GK + G++ A ++ ++ + K Sbjct: 239 CQIPIGVHASLMGDEVKIRAVLGLPNGKEVITKEKQGDKTKAFDLIQELLEEFLQSGAKE 298 Query: 304 VFN 306 + Sbjct: 299 ILE 301 >gi|156846242|ref|XP_001646009.1| hypothetical protein Kpol_1031p58 [Vanderwaltozyma polyspora DSM 70294] gi|156116680|gb|EDO18151.1| hypothetical protein Kpol_1031p58 [Vanderwaltozyma polyspora DSM 70294] Length = 327 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 98/321 (30%), Positives = 154/321 (47%), Gaps = 17/321 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K+ IG R S LA+A + + + + + + P + I+ L T GD+I ++ L GG Sbjct: 1 MSKEVLVIGGRSSKLAVAQSTKVKELIEE--QFPQYECRIVALKTLGDQIQSKPLYSFGG 58 Query: 61 KGLFTEEIEKKLISG----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH--- 113 K ++T+E+E L ID VHS KD+PT L G +I A R D D + Sbjct: 59 KAVWTKELEDLLYHEDAKERIDLIVHSLKDVPTLLPDGFEIGAITKRVDPSDCLVMPIDS 118 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILL 171 +SL DL S++GTSS+RR A L R + RG I TRL K+++ ++H I+L Sbjct: 119 KYKSLDDLPNGSIVGTSSIRRSAQLKRRYPHLKFESVRGNIHTRLKKVDDPESHYQCIIL 178 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ R+ E I + N + GQGA+ IE + K + ++ I+ E+T Sbjct: 179 AAAGLIRMGLESRITQTFNSTMMYHAVGQGAMGIEIREGDEKLRNILSKISDEETTVCCL 238 Query: 232 CERAFLAELDGSCKSAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVS----RNGNRCDA 285 ER+ + L+G C I L GIV+ DG E ++ D+ Sbjct: 239 AERSLMRTLEGGCSVPIGVETKYDASKKELLLKGIVVDVDGTKAIEEQHSIIIQDSKEDS 298 Query: 286 INIGRDAAQYIRFISNKNVFN 306 + G+ A+ ++ K + + Sbjct: 299 MACGKALAEKMKQAGAKTILD 319 >gi|302541659|ref|ZP_07294001.1| hydroxymethylbilane synthase [Streptomyces hygroscopicus ATCC 53653] gi|302459277|gb|EFL22370.1| hydroxymethylbilane synthase [Streptomyces himastatinicus ATCC 53653] Length = 311 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 97/304 (31%), Positives = 147/304 (48%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L + P ++P++T GDR L+++GGKG FT Sbjct: 7 IRIVSRSSPMALAQVERVRTELAALR--PGIRTEVVPVTTSGDRWMG-DLSKLGGKGAFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +AYL R+DIRD I +L + Sbjct: 64 KEVDAALLAGEADLAVHCIKDVPADRPLPAGTVFAAYLKRDDIRDAVIHPEGLTLDQMPE 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSS+RR A L + + RG RL K+ A++LA +G++R+ + Sbjct: 124 GTRIGTSSVRRVAQLAVTHPHVECVPMRGNANRRLEKMAAGDCDALMLAVSGLERIDRTD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI EIL +E P G G + ++ ++ E V + + W + ER L L G Sbjct: 184 VISEILPVETMCPPIGAGVLGLQCREDDTTTIEAVAGLGDTEVWKEITAERMLLHVLQGH 243 Query: 244 CKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG+A + L V + DGK + D +G A + + Sbjct: 244 CNSPIAGYAKAERDGRLSLRARVFSPDGKTVLDAHEWAGPLDPATLGTSVAVALLRQGAR 303 Query: 303 NVFN 306 V + Sbjct: 304 EVID 307 >gi|282865792|ref|ZP_06274842.1| porphobilinogen deaminase [Streptomyces sp. ACTE] gi|282559436|gb|EFB64988.1| porphobilinogen deaminase [Streptomyces sp. ACTE] Length = 311 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 99/304 (32%), Positives = 149/304 (49%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L + P ++P+ T GD L+++ GKG FT Sbjct: 7 IRIVSRDSPMALAQVERVRNELAARY--PALRTEVVPVRTTGDTWLG-DLSQVEGKGAFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +A+L R+DIRD + +L +L Sbjct: 64 KEVDAALLAGEADLAVHCVKDIPADRPLPAGTTFAAFLERDDIRDALVHPDGLTLDELPP 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S IGTSS+RR A L ++ + FRG RL KL + A+LLA +G++R+ + Sbjct: 124 GSRIGTSSVRRTAQLAASHPELRCVPFRGNANRRLAKLAAGEVDALLLAVSGLRRIGRPD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI +IL E P G G + ++ ++ + V +NH T+ + ER FL L G Sbjct: 184 VISDILGPETMIPPIGAGVLALQCRQDDTATIDAVAALNHPATYREITAERMFLHVLQGH 243 Query: 244 CKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG+A + L G V DGK D +G A + + Sbjct: 244 CNSPIAGYATSHRNGDLSLRGCVFTPDGKTVLNAHEWAGPLDPATLGTSVAVTLLRQGAR 303 Query: 303 NVFN 306 + + Sbjct: 304 ELID 307 >gi|326383045|ref|ZP_08204734.1| porphobilinogen deaminase [Gordonia neofelifaecis NRRL B-59395] gi|326198181|gb|EGD55366.1| porphobilinogen deaminase [Gordonia neofelifaecis NRRL B-59395] Length = 315 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 93/309 (30%), Positives = 144/309 (46%), Gaps = 15/309 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA A + L H ++ +ST GD ++ + +IG G+F Sbjct: 8 TIRIGTRGSLLATTQAQDIADRLTAA----GHPAELVIISTAGDT-SSAPVAQIG-VGVF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T I L SGE D A+HS KD+PT L ++A R D RD +S L +L Sbjct: 62 TTAIRLALRSGECDVAIHSYKDLPTAPEDDLAMAAVPTRVDPRDALVSRDGMVLGELPSG 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SV+GTSS RR A L + + RG +++RL K+ + + AI++A AG+ R+ + V Sbjct: 122 SVVGTSSPRRAAQLRALGLGLEIRPLRGNLDSRLGKVASGELDAIVVARAGLVRIGRADV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E L+ +P QGA+ +E ++ + ++ ++ T +V+ ERA LA L+ C Sbjct: 182 VTEALDPLVMLSAPAQGALAVECRSDDAELVRILAELDDPSTRAAVDAERAVLATLEAGC 241 Query: 245 KSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 + + A S L V A DG S G A +G+D A Sbjct: 242 TAPVGALAEVVDSIDEDGRIFAELSLRAAVAAEDGSEVIRASVVGPVDRAAQLGKDLAAE 301 Query: 296 IRFISNKNV 304 + + + Sbjct: 302 LLELGAAAL 310 >gi|45185123|ref|NP_982840.1| ABL107Cp [Ashbya gossypii ATCC 10895] gi|55976464|sp|Q75DY0|HEM3_ASHGO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|44980759|gb|AAS50664.1| ABL107Cp [Ashbya gossypii ATCC 10895] Length = 326 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 95/321 (29%), Positives = 155/321 (48%), Gaps = 17/321 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ RI R S LA+ + + + + P + ++ T GD++ ++ L GG Sbjct: 1 MGEETLRIAGRRSKLAVIQSESVKEIVQR--EFPNYTCTVLAKQTLGDQVQSKPLYAFGG 58 Query: 61 KGLFTEEIEKKLI----SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---H 113 K L+T+E+E L ID VHS KDMPT+L +G ++ A R D D + Sbjct: 59 KALWTKELEDLLYEEDLDQRIDMIVHSLKDMPTQLPEGFELGAITKRVDPSDCLVMAAGS 118 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILL 171 ++L DL SV+GTSS+RR A L R + RG I+TRL KL++ N+ I+L Sbjct: 119 PYKTLGDLPNGSVVGTSSIRRSAQLRRRYPHLVFASVRGNIQTRLKKLDDPENECKCIIL 178 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ RL E I + + + GQGA+ IET + + Q ++ + ++ Sbjct: 179 ATAGLVRLGLESRITQRFDSTIMLHAVGQGALGIETRTGDERLQAILAKVADRNSTICCL 238 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRN----GNRCDA 285 ER+ + L+G C I ++ T L G+V++ DG E + + ++ DA Sbjct: 239 AERSLMRTLEGGCSVPIGVYSTFDEETSMLTLDGLVVSVDGADAAEATVSYKIKSDKEDA 298 Query: 286 INIGRDAAQYIRFISNKNVFN 306 I G+ A + K + + Sbjct: 299 IACGQLLAAKLLEAGAKKILD 319 >gi|157803668|ref|YP_001492217.1| porphobilinogen deaminase [Rickettsia canadensis str. McKiel] gi|166217783|sp|A8EYJ9|HEM3_RICCK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157784931|gb|ABV73432.1| porphobilinogen deaminase [Rickettsia canadensis str. McKiel] Length = 301 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 105/301 (34%), Positives = 163/301 (54%), Gaps = 5/301 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR SPLAL + +P N I+P++T GD I N+ L +IGG Sbjct: 1 MT-HSIRIGTRKSPLALIQTNLVIQQIKQF--VPDINYKIVPITTSGDLIQNKPLYDIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K LF +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++ Sbjct: 58 KALFLKEIEQALLDKKIDLAVHSLKDVPGRIPEDLIIAAVLEREDPRDVFVCLKYKSIEE 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +++IG+S++RRK + + RSD+ V FRG +++R+ KL N + A +LAYAG+KRL Sbjct: 118 LPQNAIIGSSAVRRKTFIEKIRSDLKVTVFRGNVDSRIKKLMNGEVDATILAYAGLKRLN 177 Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 ++ P GQG I +E ++ E INH T++ + ERAFL Sbjct: 178 AFNPQYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLETCNQINHLTTFELIKPERAFLEY 237 Query: 240 LDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 LD +C++ IA ++ Y + ++ + + N + G AA+ + Sbjct: 238 LDANCRTPIAAYSKYLDKDNIETDFMLGNLESSKITFHTETTNIKTSKEAGIKAAKIMLS 297 Query: 299 I 299 Sbjct: 298 E 298 >gi|327290907|ref|XP_003230163.1| PREDICTED: porphobilinogen deaminase-like, partial [Anolis carolinensis] Length = 351 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 156/338 (46%), Gaps = 35/338 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA L H P + II ++T GD+I + L++IG K Sbjct: 8 KNQTIRVGTRKSQLARIQTDSVVEMLQKHH--PQLHFEIIGMTTTGDKILDTALSKIGEK 65 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 66 SLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPHDAVVFHPKHVGKTL 125 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177 L SVIGTSSLRR A L R + D RG + TRL KL+ + AI+LA AG++ Sbjct: 126 SSLPDKSVIGTSSLRRAAQLKRAFPQLQFKDIRGNLNTRLKKLDEKDDFSAIVLATAGLR 185 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ E I +IL + + GQGA+ +E + + E+V V++ +T ERAF+ Sbjct: 186 RMGWEDRIGQILTPMECLYAVGQGALAVEVRARDQEILEMVSVLHDGETVLRCIAERAFM 245 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCDAI 286 L+G C +A K S LY G V + DG + G + Sbjct: 246 KHLEGGCSVPVAVSTTLKDSQLYLTGAVYSLDGSESLCETMQTNVKFPMEDEEGPDDNIQ 305 Query: 287 NIGR----------DAAQY--------IRFISNKNVFN 306 ++G AA+ + + + + Sbjct: 306 HLGIMARTEPRAAQAAAEKLGLDLAALLLSQGARPILD 343 >gi|302870086|ref|YP_003838723.1| porphobilinogen deaminase [Micromonospora aurantiaca ATCC 27029] gi|315503637|ref|YP_004082524.1| porphobilinogen deaminase [Micromonospora sp. L5] gi|302572945|gb|ADL49147.1| porphobilinogen deaminase [Micromonospora aurantiaca ATCC 27029] gi|315410256|gb|ADU08373.1| porphobilinogen deaminase [Micromonospora sp. L5] Length = 328 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 95/313 (30%), Positives = 157/313 (50%), Gaps = 17/313 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + +L P + ++ + T GDR + + G G+F Sbjct: 4 PLRLGTRGSALAMAQSGHVAEALTAATGRP---VELVEVVTAGDR--STAPVQRLGVGVF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L +GEID AVHS KD+PT GL ++A PR+D RD ++ ++L +L Sbjct: 59 VSALRDALTAGEIDFAVHSYKDLPTAAAPGLHVAAVPPRQDPRDALVATNGRTLAELPPG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRLKKE 182 + +GT +LRR A L + V RG ++TRL ++ + A++LA AG+ R+ + Sbjct: 119 ARVGTGALRRIAQLHALGMQLEVSPIRGNVDTRLGRVLGPDADLDAVVLARAGLNRIGRA 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+P QGA+ +E ++ EL+ +++H + ++ ERA LA L+ Sbjct: 179 DVITETLDPMLMLPAPAQGALAVECRADDQDVIELLALLDHAPSRAAITAERALLATLEA 238 Query: 243 SCKSAIAGFAYC----------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292 C + +A +A +Y G V++ DG +SR G DA IG+ Sbjct: 239 GCSAPVAAYAVLAEGEPTDEGDVNQEIYLRGAVISPDGTRDLRLSRTGTPADAAEIGKAL 298 Query: 293 AQYIRFISNKNVF 305 A + + ++ Sbjct: 299 AAELLELGADSIL 311 >gi|306819824|ref|ZP_07453478.1| hydroxymethylbilane synthase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304552071|gb|EFM40008.1| hydroxymethylbilane synthase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 301 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 101/305 (33%), Positives = 154/305 (50%), Gaps = 7/305 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ + RI R S LAL L +K N I+ + T GD+ L+EIG Sbjct: 1 MKMQTVRIAGRKSKLALVQTQRVIDLLKQKYK--DVNFEIVTVETLGDKNLKEKLSEIGT 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLK 119 KGLFT EIE+ L++G +D AVHS KDMPT ++ L+I AY+ RE +DV + +S+K Sbjct: 59 KGLFTFEIEQMLLNGSVDMAVHSLKDMPTDFIRDLKIGAYIKRESNKDVIVFNKDYKSVK 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL ++ IGTSSLRR+ + + D V + RG I TRL ++ + AI+LA + RL Sbjct: 119 DLPKNAKIGTSSLRREVQIKKLGKDFEVANIRGNIHTRLKRMKDENFDAIILAKVALTRL 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + F + GQG IC++ +N K +++++ +N +T V ER FL Sbjct: 179 NLQDELVFEELP--FVSAAGQGCICVQVKKDNKKIEKMLEFLNDAETQSCVMAEREFLHT 236 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + G C + + + G Y V + DGK + D N+G+ AQ + Sbjct: 237 IGGGCHTPVGAYCEKIGQIYRIYAFVSSLDGKKYLSCEI--KSKDTENLGKQTAQRLIAK 294 Query: 300 SNKNV 304 + Sbjct: 295 GADKI 299 >gi|148693633|gb|EDL25580.1| mCG10727, isoform CRA_a [Mus musculus] Length = 371 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 93/335 (27%), Positives = 142/335 (42%), Gaps = 58/335 (17%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA + L ++ P II +ST GD+I + L++IG K Sbjct: 56 KMRVIRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEK 113 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H Sbjct: 114 SLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFI---- 169 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLK 180 ++ RG + TRL KL+ + AI+LA AG++R+ Sbjct: 170 ----------------------GKTLETLRGNLNTRLRKLDELQEFSAIVLAVAGLQRMG 207 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL L Sbjct: 208 WQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRHL 267 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD----- 284 +G C +A K LY G V + DG + + +G D Sbjct: 268 EGGCSVPVAVHTVMKDGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLVG 327 Query: 285 -------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 328 ITARNIPRGAQLAAENLGISLASLLLNKGAKNILD 362 >gi|255004322|ref|ZP_05279123.1| porphobilinogen deaminase [Anaplasma marginale str. Virginia] Length = 303 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 96/300 (32%), Positives = 160/300 (53%), Gaps = 4/300 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M R+GTR S LAL A E ++++ + P + + + T GD +R L +IGG Sbjct: 1 MHAPVVRLGTRGSTLALIQAEEVKAAIAA--RFPEVRVDVTKIKTSGDVKVDRPLCDIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L++ +ID AVHSAKD+P + L + L R DVFIS +SL Sbjct: 59 KGLFIKEIEEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSS+RRK LL +R D+ + RG ++TR+ K+ + + I+LA AG+ R+ Sbjct: 119 LPAGAKIGTSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRIS 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E+L+ + + GQGAIC++ ++ ++ +N +++ +V ER+F+ + Sbjct: 179 ARAKITEVLHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAV 238 Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +GSC + +A A + ++ D + R DA ++G + ++ Sbjct: 239 NGSCHTPLAAMARYVDSGLMSMKCMLA-HDSRTMVFAERTFPERDAESVGFEMGVMLKDE 297 >gi|56416851|ref|YP_153925.1| porphobilinogen deaminase [Anaplasma marginale str. St. Maries] gi|56388083|gb|AAV86670.1| porphobilinogen deaminase [Anaplasma marginale str. St. Maries] Length = 303 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 96/300 (32%), Positives = 159/300 (53%), Gaps = 4/300 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M R+GTR S LAL A E ++++ P + + + T GD +R L +IGG Sbjct: 1 MYAPVVRLGTRGSTLALIQAEEVKAAIAA--HFPEVRVDVTKIKTSGDIKVDRPLCDIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L++ +ID AVHSAKD+P + L + L R DVFIS +SL Sbjct: 59 KGLFIKEIEEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSS+RRK LL +R D+ + RG ++TR+ K+ + + I+LA AG+ R+ Sbjct: 119 LPAGAKIGTSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRIS 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E+L+ + + GQGAIC++ ++ ++ +N +++ +V ER+F+ + Sbjct: 179 ARAKITEVLHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAV 238 Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +GSC + +A A + ++ D + R DA ++G + ++ Sbjct: 239 NGSCHTPLAAMARYVDSGLMSMKCMLA-HDSRTMVSAERTFPERDAESVGFEMGVMLKDE 297 >gi|15604330|ref|NP_220846.1| porphobilinogen deaminase [Rickettsia prowazekii str. Madrid E] gi|11386862|sp|Q9ZD77|HEM3_RICPR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|3861022|emb|CAA14922.1| PORPHOBILINOGEN DEAMINASE (hemC) [Rickettsia prowazekii] gi|292572083|gb|ADE29998.1| Porphobilinogen deaminase [Rickettsia prowazekii Rp22] Length = 299 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 104/298 (34%), Positives = 158/298 (53%), Gaps = 4/298 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR S LAL + + P N I+P+ T GD I N+ L +IGGK L Sbjct: 3 NSIRIGTRNSTLALIQTNLVIEQIKQI--FPDINCEIVPIITSGDLIQNKPLYDIGGKAL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+ +ID AVHS KD+P K+ L I+A L RED RDV + QS++ L Sbjct: 61 FLKEIEQALLDKKIDLAVHSLKDIPGKIPVELVIAAVLEREDPRDVLVCLNYQSIETLPQ 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KE 182 ++VIG+S++RRKA + + R D+++ FRG +++R+ KL + AI+L+YAG+KRL Sbjct: 121 NAVIGSSAVRRKAFIKKIRPDLNIKVFRGNVDSRIKKLMTGEVDAIILSYAGLKRLNVFN 180 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + ++ P GQG I +E ++ + INH T++ + ERAFL LD Sbjct: 181 QKYCHLIEYSKMLPCIGQGVIAVEIRKDDNAMFNICSQINHLPTFELIKPERAFLEYLDA 240 Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +C + IA +A Y + ++ D + N + G AA+ + Sbjct: 241 NCSTPIAAYAQYLDAYNIQIDFMLGNLDCTKIIFQTEITNIKTSKICGIKAAKMMLAQ 298 >gi|296268254|ref|YP_003650886.1| porphobilinogen deaminase [Thermobispora bispora DSM 43833] gi|296091041|gb|ADG86993.1| porphobilinogen deaminase [Thermobispora bispora DSM 43833] Length = 303 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 98/304 (32%), Positives = 156/304 (51%), Gaps = 7/304 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M P R+GTR S +A + + L ++ ++T GD ++ LT++GG Sbjct: 1 MSA-PLRLGTRKSLMATSQSRRVAERLAQAT---GRRSELVGITTFGD-VSRAHLTQLGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F E+ LI+GE+D AVHS KD+PTK + I+A PR+D RD F+ + Sbjct: 56 TGVFVSELRNALIAGEVDFAVHSLKDLPTKGDDRIVIAAIPPRDDPRDAFVGRVP--FSE 113 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT S RR A L R D+ + RG +TRL K+ + + I+LA AG+ R+ Sbjct: 114 LPPGARVGTGSPRRIAQLRMLRPDLEYVPIRGNADTRLGKVTSGELDGIVLAAAGLGRIG 173 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +E+ I ++ +E P+PGQGA+ +E + EL+ I+ T D+V ER+ LA L Sbjct: 174 REEAIAQVFEVEQVLPAPGQGALAVECRADRADLIELLSAIDDRATRDAVTAERSVLAAL 233 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 + C + + A G+ L V++ DG+ S +G A+ +GRD A + Sbjct: 234 EAGCAAPVGAHASGDGNVLSLTAAVVSVDGRRSVRKSVSGPASAAMELGRDLAAAMLAEG 293 Query: 301 NKNV 304 + Sbjct: 294 AGTL 297 >gi|254303623|ref|ZP_04970981.1| hydroxymethylbilane synthase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323815|gb|EDK89065.1| hydroxymethylbilane synthase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 301 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 110/306 (35%), Positives = 147/306 (48%), Gaps = 7/306 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT--LTEIG 59 KK IG+R S LALA A + L P I + T GD+ ++I Sbjct: 1 MKKNIIIGSRGSILALAQANLVKEKLE--LNYPNLTFEIKEIVTSGDKDLKSNWENSDIS 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L Sbjct: 59 LKSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLV 117 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 118 TLPQGAKVGTSSLRRAMNLKAVRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRT 177 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I E LN E FPP+P QG + I+ N+ + +E++K I++E V ER F Sbjct: 178 GLADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKEILKSIHNEAIAKIVEIEREFSKI 237 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DG C + + ++ G + F V + +GK + I AA+ I+ Sbjct: 238 FDGGCHTPMGCYSQINGDKIKFTA-VYSDEGKQ-IKAVVEDYLVKGKEIAHMAAEEIKNK 295 Query: 300 SNKNVF 305 KN Sbjct: 296 IAKNTL 301 >gi|291452105|ref|ZP_06591495.1| porphobilinogen deaminase 1 [Streptomyces albus J1074] gi|291355054|gb|EFE81956.1| porphobilinogen deaminase 1 [Streptomyces albus J1074] Length = 323 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 89/321 (27%), Positives = 154/321 (47%), Gaps = 21/321 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K R+GTR S LA+A + + ++ + P + ++ ++T GD L +IGG Sbjct: 1 MTEKALRLGTRRSKLAMAQSGQVADAVHQLTGRP---VELVEITTYGDTSR-EHLAQIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L+ GE+D AVHS KD+PT L ++A PRED RDV I+ ++ Sbjct: 57 TGVFVAALREALVRGEVDFAVHSLKDLPTAQPDELVLAAVPPREDPRDVLIARDGLRFEE 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISV----IDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + +GT S RR A L + + + RG I+TR+ + + + A++LA AG+ Sbjct: 117 LPEGARVGTGSPRRMAQLNAYARGHRMAVETVPIRGNIDTRIGFVRSGELDAVVLAAAGL 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI----NHEDTWDSVNC 232 R+ + + E L+++ P+PGQGA+ IE + + + + T +V Sbjct: 177 HRVGRSDEVTEYLSVDTILPAPGQGALAIECAAGHEADGLPLAAVLAELDDPATRAAVTA 236 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----C 283 ER+ LA L+ C + + A + G+V + DG ++S G Sbjct: 237 ERSLLAALEAGCSAPVGALADLLADGQVVKEMRLRGVVGSPDGSALVQLSTTGPVPTTHD 296 Query: 284 DAINIGRDAAQYIRFISNKNV 304 +A +G + A + + Sbjct: 297 EAAALGTELAAEMLAKGAAGL 317 >gi|225012137|ref|ZP_03702574.1| porphobilinogen deaminase [Flavobacteria bacterium MS024-2A] gi|225003692|gb|EEG41665.1| porphobilinogen deaminase [Flavobacteria bacterium MS024-2A] Length = 300 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 103/299 (34%), Positives = 151/299 (50%), Gaps = 8/299 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A E ++ L + ++ + + GD+ N+ L +G +G+FT Sbjct: 2 VRIGTRKSKLALWQANEVKAILES----EGYPCCLVHIESNGDQDLNQPLYAMGIQGVFT 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + ++ L++ +ID AVHS KD+PT L KG+ I A L R + DV + + A + Sbjct: 58 KTLDTALLNEKIDIAVHSLKDVPTLLPKGINIKAVLSRGNPMDVLVYNPAFMGWETEAS- 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGT SLRRKA LR V + RG ++ R+ KLNN+ + A AG+ RL + Sbjct: 117 -IGTGSLRRKAQWLRKNPKHQVENLRGNLQKRIEKLNNSNWSGAIFAQAGLDRLNLLQDN 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+ +E P+P QG I I + N + ++ IN +T ER+FL L+G C Sbjct: 176 YEV--LEWMIPAPSQGIIGIASLEKNKELNAVLDKINCAETSLCAQIERSFLNTLEGGCT 233 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I AYC +TLYF G + + DG I N + G AAQ I K + Sbjct: 234 APIGAHAYCIENTLYFKGGLFSLDGTIAIVHEENTPLENTKEYGVKAAQKILNEGGKEL 292 >gi|198415361|ref|XP_002126885.1| PREDICTED: similar to hydroxymethylbilane synthase, b [Ciona intestinalis] Length = 359 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 101/280 (36%), Positives = 150/280 (53%), Gaps = 6/280 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 R+GTR S LA+ + L ++K + I+ ++T GD+I +++L++ G K Sbjct: 4 NNILRVGTRKSELAMVQTNWVVNQLKSLNK--SLEVEIVQMATIGDKILDKSLSKTGEKS 61 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 LFT+E+E LI+ ++D V+S KDMP+ L L ISA RED RD I H + L+ Sbjct: 62 LFTKELEDALIANQVDLVVNSLKDMPSTLPPNLTISAVSRREDPRDAVIMHPDNVGKRLE 121 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKR 178 DL S++GTSSLRR A L + D+ RG + TRL KL++ + AI+LA AG+KR Sbjct: 122 DLPPGSIVGTSSLRRVAQLKKLFPDLKFKSIRGNLNTRLRKLDDASNFSAIILAVAGVKR 181 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + I L ++ + GQGA+ IET ++ K+ +LV ++ +DT ERAFL Sbjct: 182 MGWNARISYTLTTDECLYAIGQGALGIETRADDMKSIKLVSQLHDKDTVIRTVAERAFLK 241 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR 278 L G C A ++ LY G V DG + Sbjct: 242 TLGGGCSVPQAVHSWIIEDELYMRGAVFNLDGSKSLYETM 281 >gi|171692929|ref|XP_001911389.1| hypothetical protein [Podospora anserina S mat+] gi|170946413|emb|CAP73214.1| unnamed protein product [Podospora anserina S mat+] Length = 341 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 106/325 (32%), Positives = 155/325 (47%), Gaps = 21/325 (6%) Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M ++ +IGTR S LALA ++L P + ++T GDR L +G Sbjct: 1 MTEEYTVKIGTRRSALALAQTDLVIAALSKAAG-PSVKFEVHSMATMGDRDKTTPLPSLG 59 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT----- 114 KGL+T E+E KL++ E+D VHS KDMPT L +G + A RED RDV + Sbjct: 60 -KGLWTSELEAKLVNKEVDVIVHSLKDMPTSLPEGCVLGAVTQREDARDVVVFPRRQGGE 118 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLA 172 ++LKDL SV+GTSS+RR A L R + D RG I+TRL K + N AI+LA Sbjct: 119 YKALKDLPEGSVVGTSSVRRAAQLKRSYKGLVFRDVRGNIDTRLAKCDDENGGYDAIILA 178 Query: 173 YAGIKRLKKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD 228 AG+ RL ++ I + L + GQGA+ +E + K EL+K EDT Sbjct: 179 AAGLLRLGYDERIGQYLESSTEGGGLLHAVGQGALGLEIREGDEKIAELIKAAVDEDTMM 238 Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGST----LYFYGIVLASDGKIFH---EVSRNGN 281 + ER+ + L+G C I L V++ DGK + N Sbjct: 239 AAFAERSVMRTLEGGCSVPIGVETKWVEDEGEKKLRLKVAVVSLDGKKAVDGERTEKIAN 298 Query: 282 RCDAINIGRDAAQYIRFISNKNVFN 306 +A +G+ A+ + + + + Sbjct: 299 LEEAEALGKSLAEKLAREGAQEILD 323 >gi|149369456|ref|ZP_01889308.1| porphobilinogen deaminase [unidentified eubacterium SCB49] gi|149356883|gb|EDM45438.1| porphobilinogen deaminase [unidentified eubacterium SCB49] Length = 313 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 95/311 (30%), Positives = 147/311 (47%), Gaps = 16/311 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K RIGTR S LAL A + L + + ++P+ + GD + ++ L E+G Sbjct: 1 MNKVIRIGTRDSELALWQANTVKRQLESL----GYKTELLPVKSTGDLVLDKPLYEMGIT 56 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT+ ++ +++G +D AVHS KD+PT L KG+ +A L R DV ++ S D Sbjct: 57 GIFTKTLDVAMLNGTVDIAVHSMKDVPTALPKGIIQTAVLERAMTEDVLVT---TSEIDY 113 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 I T SLRRKA L +V+D RG ++TRL KL +N + A AG+ RL+ Sbjct: 114 TKPCTIATGSLRRKAQWLNRYPHHTVVDLRGNVQTRLQKLKDNPWDGAIFAKAGLDRLEY 173 Query: 182 EKVIKEILN--------IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 + + P+P QGA+ I T N+ + V +N+ E Sbjct: 174 LNNTEITSPDFSGTFENLSWMLPAPAQGAMVIVTLQNDDFTTKAVSKLNNTAADICTQIE 233 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 R FL +L+G C + I A + F G + + DGK EV + ++ + G DAA Sbjct: 234 RDFLRKLEGGCTAPIGALAQVVEENIQFTGCLFSLDGKTKIEVEKTIDKNNNNG-GVDAA 292 Query: 294 QYIRFISNKNV 304 + + Sbjct: 293 IELLENDGAAL 303 >gi|320006816|gb|ADW01666.1| porphobilinogen deaminase [Streptomyces flavogriseus ATCC 33331] Length = 311 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 101/304 (33%), Positives = 149/304 (49%), Gaps = 6/304 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI +R SP+ALA R+ L +H P ++P+ T GD+ L+++ GKG FT Sbjct: 7 IRIVSRDSPMALAQVERVRAGLAALH--PDTVTEVVPVRTTGDKWLG-DLSKVEGKGAFT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E++ L++GE D AVH KD+P L G +A+L R+DIRD + +L+ L Sbjct: 64 KEVDAALLAGEADLAVHCVKDIPADRPLPAGTTFAAFLERDDIRDALVHPDGLTLEQLPE 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + IGTSS+RR A L + + FRG RL KL +A A+LLA AG+ R+ + Sbjct: 124 GTRIGTSSVRRTAQLASSHPHLDCVPFRGNANRRLAKLAAGEADALLLAVAGLHRIGRPD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 VI +IL E P G G + ++ ++ E V +NH T+ + ER FL L G Sbjct: 184 VISDILAPETMCPPIGAGVLALQCREDDTATIEAVGALNHPGTYREITAERMFLHVLQGH 243 Query: 244 CKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C S IAG+A + L V DGK D +G A + + Sbjct: 244 CNSPIAGYATAHRNGDLSLRACVFTPDGKTVLNAHEWAGPLDPATLGTSVAVSLLRQGAR 303 Query: 303 NVFN 306 + + Sbjct: 304 ELID 307 >gi|317064836|ref|ZP_07929321.1| porphobilinogen deaminase [Fusobacterium ulcerans ATCC 49185] gi|313690512|gb|EFS27347.1| porphobilinogen deaminase [Fusobacterium ulcerans ATCC 49185] Length = 299 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 109/303 (35%), Positives = 154/303 (50%), Gaps = 6/303 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIG 59 KK IG+R S LA+A + + L + P I + T GD N ++ Sbjct: 1 MKKKIVIGSRGSILAMAQSEMIKKMLE--NNFPELEFEIKKIVTSGDTDLVSNWNNSDKS 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 K FT+EIE +L++G ID AVHS KDMP +GL A RED RDV +S + ++L Sbjct: 59 LKSFFTKEIEVELLNGTIDLAVHSMKDMPVVSPEGLICGAVPDREDSRDVLVSKSGKTLM 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +++GTSSLRR L RSD+ + RG I TRLNKL N AILLA AG+KR+ Sbjct: 119 ELPAGAIVGTSSLRRTMNLKNLRSDLEIKQLRGNIHTRLNKLKNEDYDAILLAAAGLKRV 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 EK I E L+ E F P+P QG + I+ N+ + ++++K I++ED V ER F Sbjct: 179 GLEKEITEYLDPEKFLPAPAQGVLHIQCRENDDEVKKILKSIHNEDIEKVVVIEREFSKI 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DG C + + G + GI G+ + S + I + A I+ Sbjct: 239 FDGGCHTPMGCHCILDGDKITLTGIYF--KGENGYSASITEDAALGIKTAQKLADIIKEK 296 Query: 300 SNK 302 N Sbjct: 297 IND 299 >gi|51473654|ref|YP_067411.1| porphobilinogen deaminase [Rickettsia typhi str. Wilmington] gi|55976371|sp|Q68WR3|HEM3_RICTY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|51459966|gb|AAU03929.1| Porphobilinogen deaminase [Rickettsia typhi str. Wilmington] Length = 299 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 100/298 (33%), Positives = 156/298 (52%), Gaps = 4/298 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR S LAL + + P N I+P+ T GD I N+ L +IGGK L Sbjct: 3 NSIRIGTRNSTLALIQTNLVIAQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGGKAL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +EIE+ L+ +ID AVHS KD+P ++ L I+A L RED RDV + +S++ L Sbjct: 61 FLKEIEQALLDKKIDLAVHSLKDIPGRIPVDLVIAAVLEREDPRDVLVCLNYKSIETLPQ 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-KE 182 ++VIG+S++RRKA + + R D+++ FRG +++R+ KL + A +L+YAG+KRL Sbjct: 121 NAVIGSSAVRRKAFIKKIRPDLNIKVFRGNVDSRIKKLMTGEVDATILSYAGLKRLNAFN 180 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 K ++ P GQG I +E ++ + INH T++ + ERAFL LD Sbjct: 181 KKYCHLIEYSQILPCVGQGVIAVEIRKDDNAMFNICNQINHIPTFELIKPERAFLEHLDA 240 Query: 243 SCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +C + I ++ Y + ++ D + N + G AA+ + Sbjct: 241 NCSTPIGAYSQYLDAYNIQTDFMLGKLDCNKIIFQTEITNINTSRECGIKAAKMMLAQ 298 >gi|328863687|gb|EGG12786.1| hypothetical protein MELLADRAFT_114915 [Melampsora larici-populina 98AG31] Length = 430 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 104/333 (31%), Positives = 149/333 (44%), Gaps = 33/333 (9%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P IGTR S LAL A R H P H I +ST GD+ R L +GGK L+ Sbjct: 44 PIVIGTRNSRLALVQAELVRKLFEISH--PNHPTTIQSMSTAGDQNQGRPLYLMGGKSLW 101 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK---DL 121 T+E+E L+ G +D VH KDMPT L G ++ A L RED RD + + +L Sbjct: 102 TKELEVALLEGSVDLIVHCLKDMPTSLPPGCELGAILEREDPRDALVIRRDLPFRSLSEL 161 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRL 179 SVIGTSS+RR A L R + D RG + TR KL+ ++ I+LA AG+ RL Sbjct: 162 PAGSVIGTSSVRRVAQLRRRFPQLKFQDIRGNLNTRFRKLDAPDSPYTGIVLAVAGLNRL 221 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK-------------AQELVKVINHEDT 226 + I L+ + + GQGAI IE + ++LVK + H T Sbjct: 222 ECADRISSYLSPPELYYAVGQGAIGIEIRSRAEEGEVTPRASQRTETVRQLVKSLEHWPT 281 Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYC----------KGSTLYFYGIVLASDGKIFHEV 276 + ER+ L L+G C + + + L G+V + DG V Sbjct: 282 ALVCHAERSLLRTLEGGCSVPVGVTSTLLPLPMPCQWAPQARLTLTGVVTSVDGTKEVMV 341 Query: 277 SRNGNR---CDAINIGRDAAQYIRFISNKNVFN 306 ++ + D+I +G + A + + Sbjct: 342 TKTADIYGPKDSIKLGCELAAELLEAGADEILE 374 >gi|262201010|ref|YP_003272218.1| porphobilinogen deaminase [Gordonia bronchialis DSM 43247] gi|262084357|gb|ACY20325.1| porphobilinogen deaminase [Gordonia bronchialis DSM 43247] Length = 313 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 94/309 (30%), Positives = 145/309 (46%), Gaps = 15/309 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA A +L + H ++ + T GD + + EIG G+F Sbjct: 8 PIRIGTRGSLLATTQAQTIADALTEA----GHPAELVIIRTAGD-DSAAPVAEIG-VGVF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T I L + E+D AVHS KD+PT GL I+A PRED RD +S L +L Sbjct: 62 TTAIRIALHNREVDVAVHSYKDLPTADEPGLYIAAVPPREDPRDALVSRDNMVLGELPPG 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S IGTS+ RR A L + + RG +++RL K+ + + A+++A AG+ R+ + Sbjct: 122 STIGTSAPRRVAQLRALGLGLEIRPLRGNLDSRLGKVASGELDAVVVARAGLVRIGRADE 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E + P+P QGA+ +E ++ + ++ ++ E T +++ ERA LA L+ C Sbjct: 182 VTESFDPVVLLPAPAQGALAVECRSDDAQLVRILAELDDESTRAAIDAERAVLAALEAGC 241 Query: 245 KSAIAGFAY----CKGS-----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 + I A L V A DG S G A +G D A Sbjct: 242 TAPIGAIAEVVESIDDDGRIFAELSLRAAVAAEDGSDVIRASVVGPVDRAAQLGADLAAE 301 Query: 296 IRFISNKNV 304 + + ++ Sbjct: 302 LLELGAGDL 310 >gi|239929697|ref|ZP_04686650.1| porphobilinogen deaminase [Streptomyces ghanaensis ATCC 14672] gi|291438017|ref|ZP_06577407.1| porphobilinogen deaminase 1 [Streptomyces ghanaensis ATCC 14672] gi|291340912|gb|EFE67868.1| porphobilinogen deaminase 1 [Streptomyces ghanaensis ATCC 14672] Length = 319 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 90/317 (28%), Positives = 153/317 (48%), Gaps = 17/317 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K R+GTR S LA+A + + ++ V P + ++P++T GD L +IGG Sbjct: 1 MTEKALRLGTRRSKLAMAQSGQVAEAVRQVTGRP---VELVPITTYGDTSR-EHLAQIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L GE+D AVHS KD+PT L ++A RED RDV + D Sbjct: 57 TGVFVAALREALARGEVDFAVHSLKDIPTTQPDELVVAAIPVREDPRDVMVGRDVPKFTD 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVI----DFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + IGT S RR A L + + RG ++TR+ + + + A++LA AG+ Sbjct: 117 LPRGARIGTGSPRRMAQLNAYARAHGMEIETVPIRGNVDTRIGYVRSGELDAVVLAAAGM 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ + + + + L+++ P+PGQGA+ +E +N + ++ T +V ER+ Sbjct: 177 NRVGRSEEVTDFLSVDTVLPAPGQGALAVECTADNAPLIAALAELDDPLTRAAVTAERSL 236 Query: 237 LAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAIN 287 LA L+ C + + A G + G+V +DG ++S G A+ Sbjct: 237 LAALEAGCSAPVGALADLLGDGQTVKEMRLRGVVGTTDGTKLVQLSTTGPVPETHEAAMA 296 Query: 288 IGRDAAQYIRFISNKNV 304 +G + A + + Sbjct: 297 LGSELATEMLAQGAAGL 313 >gi|222475216|ref|YP_002563632.1| porphobilinogen deaminase (hemC) [Anaplasma marginale str. Florida] gi|255003192|ref|ZP_05278156.1| porphobilinogen deaminase [Anaplasma marginale str. Puerto Rico] gi|269958734|ref|YP_003328521.1| porphobilinogen deaminase [Anaplasma centrale str. Israel] gi|222419353|gb|ACM49376.1| porphobilinogen deaminase (hemC) [Anaplasma marginale str. Florida] gi|269848563|gb|ACZ49207.1| porphobilinogen deaminase [Anaplasma centrale str. Israel] Length = 303 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 96/300 (32%), Positives = 159/300 (53%), Gaps = 4/300 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M R+GTR S LAL A E ++++ P + + + T GD +R L +IGG Sbjct: 1 MYAPVVRLGTRGSTLALIQAEEVKAAIAA--HFPEVRVDVTKIKTSGDVKVDRPLCDIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L++ +ID AVHSAKD+P + L + L R DVFIS +SL Sbjct: 59 KGLFIKEIEEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSS+RRK LL +R D+ + RG ++TR+ K+ + + I+LA AG+ R+ Sbjct: 119 LPAGAKIGTSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRIS 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E+L+ + + GQGAIC++ ++ ++ +N +++ +V ER+F+ + Sbjct: 179 ARAKITEVLHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAV 238 Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +GSC + +A A + ++ D + R DA ++G + ++ Sbjct: 239 NGSCHTPLAAMARYVDSGLMSMKCMLA-HDSRTMVSAERTFPERDAESVGFEMGVMLKDE 297 >gi|86133880|ref|ZP_01052462.1| Porphobilinogen deaminase [Polaribacter sp. MED152] gi|85820743|gb|EAQ41890.1| Porphobilinogen deaminase [Polaribacter sp. MED152] Length = 530 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 98/307 (31%), Positives = 150/307 (48%), Gaps = 10/307 (3%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K RIGTR S LAL A + R L ++ + I+P+ + GD I ++ L E+G Sbjct: 1 MQKTIRIGTRESQLALWQANKVRKQLEEL----GYETEIVPIKSTGDIILDKPLYELGIT 56 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT+ ++ L++ +ID AVHS KD+PT L +G+ A L R + D+ + + Sbjct: 57 GIFTKNLDIALLNEDIDIAVHSLKDVPTALPEGIMQGAVLKRANYSDLLVLKDTEEFFGQ 116 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLK 180 +I T SLRRKA+ L V D RG + TRL+KL N + + A AG++RL Sbjct: 117 P-GGIIATGSLRRKAMWLNRYPTHKVEDLRGNVNTRLSKLENSETWNGAIFAAAGLERLG 175 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K + + P+P QGAI + + + + +NH +T V ER FL L Sbjct: 176 --LREKGAIPLTWMIPAPAQGAIMLACLEKDQFVIDACEQLNHYETKVCVGIEREFLRLL 233 Query: 241 DGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +G C + I AY T + F GI+L DG V++ + +D A Y+ Sbjct: 234 EGGCTAPIGALAYVDEKTQEINFKGILLKRDGSKKITVTKTAKLGSHRYLAKDCADYVIN 293 Query: 299 ISNKNVF 305 K + Sbjct: 294 RGGKELI 300 >gi|119714759|ref|YP_921724.1| porphobilinogen deaminase [Nocardioides sp. JS614] gi|119535420|gb|ABL80037.1| hydroxymethylbilane synthase [Nocardioides sp. JS614] Length = 314 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 93/310 (30%), Positives = 156/310 (50%), Gaps = 10/310 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M P R+GTR S LA + L + + ++ +ST+GDR + GG Sbjct: 1 MSA-PLRVGTRASVLATTQSGLVADQLREAL---GREVELVTVSTEGDRTQAAGIPLQGG 56 Query: 61 K--GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G+F + L+ GE+D AVHS KD+PT +G+ ++A RED RDV ++ +L Sbjct: 57 SATGVFVAALRDALLRGEVDVAVHSLKDLPTYPTEGITLAAVPVREDPRDVVVARDGLTL 116 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L + S +GT S RR A L + V+ RG ++TR+ K+ + + A++LA AG+ R Sbjct: 117 GELPVGSRVGTGSPRRVAQLHALGLGLEVVGIRGNVDTRIGKVRSGECDAVILARAGLAR 176 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + + + E+L+ P+PGQGA+ +E ++P A ++ ++ +V ERA LA Sbjct: 177 IGRLEAVTEVLDPLQMLPAPGQGALAVECRTDDPLAAQVAAALDDPRVRAAVTAERAVLA 236 Query: 239 ELDGSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 L+G C + I A G L+ + L+ DG + S +G+ DA +G + Sbjct: 237 TLEGGCSAPIGALAEIVEGEDGDELWVRSVALSPDGALSVRRSASGSPSDAAGVGTRLGE 296 Query: 295 YIRFISNKNV 304 + + Sbjct: 297 QMLADGADRL 306 >gi|193638791|ref|XP_001948145.1| PREDICTED: porphobilinogen deaminase-like isoform 1 [Acyrthosiphon pisum] gi|328705509|ref|XP_003242834.1| PREDICTED: porphobilinogen deaminase-like isoform 2 [Acyrthosiphon pisum] Length = 377 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 102/363 (28%), Positives = 164/363 (45%), Gaps = 61/363 (16%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K R+G+R S LAL S L ++H P I+ ++T GDR+ ++ L +IG K Sbjct: 6 RKTIRVGSRKSELALIQTKFVISQLKELH--PEIEFEIVSMTTMGDRVLDKPLPKIGEKS 63 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK--- 119 LFT+++E L+SG +D VHS KD+PT + G I A L R+D RD + Sbjct: 64 LFTKDLEVALLSGTVDFIVHSLKDLPTVMEIGTTIGAILKRDDPRDALVLRDDCKEYQLD 123 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK---------AHAIL 170 L S IGTSSLRR A L R ++ V D RG + TRL KL++++ I+ Sbjct: 124 SLPSKSFIGTSSLRRTAQLKRKFPNLQVSDVRGNLNTRLKKLDSSQSTGDNTNTNYSGII 183 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 LA AGI+R+ EK + +I++ + + GQGA+ +E + + E+++ ++H +T V Sbjct: 184 LALAGIQRMGWEKRVSQIIDSDVMLYAVGQGALAVECRLGDDYILEMLEPLHHYETVLQV 243 Query: 231 NCERAFLAELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCD---- 284 ER FL L G C + + + + + G V + DG + S + D Sbjct: 244 VAERGFLTRLGGGCSAPVGIRSTVCLTKNAMSLDGAVWSLDGAEELQYSSSAELADKKVI 303 Query: 285 -----------------------------------------AINIGRDAAQYIRFISNKN 303 A+ +G + A+ + + Sbjct: 304 QSHIDQYRGEDGEPPKKCPYKQPRQFVGVTPGKISYLDLDTALKLGTELAENLISKGALD 363 Query: 304 VFN 306 + N Sbjct: 364 IMN 366 >gi|164423255|ref|XP_001728039.1| porphobilinogen deaminase [Neurospora crassa OR74A] gi|55976426|sp|Q6MW51|HEM3_NEUCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|38566782|emb|CAE76093.1| related to hydroxymethylbilane synthase [Neurospora crassa] gi|157070012|gb|EDO64948.1| porphobilinogen deaminase [Neurospora crassa OR74A] Length = 337 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 102/321 (31%), Positives = 154/321 (47%), Gaps = 18/321 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K+ IGTR S LAL ++L H P + + L+T GD+ +L +G K Sbjct: 4 QKETVHIGTRRSALALRQVDLVIAALQPHH--PNVHFQVHALATLGDKNQTASLPSLG-K 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT------- 114 GL+T E+E KL + E+D VH KDMPT L +G +I RED RDV + Sbjct: 61 GLWTNELEAKLFNKEVDFIVHCLKDMPTTLPEGGKIGVVTEREDPRDVVVMKKKWAEQGK 120 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 +SL DL +++GTSS+RR A L R + D RG IETR+ K + I+LA A Sbjct: 121 YKSLADLPEGAIVGTSSVRRAAQLRRRYPGLVFKDVRGNIETRMRKCDEEDYDCIILAAA 180 Query: 175 GIKRLKKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 G+ R+ ++ I + L+ + GQGA+ +E + K E++K + HE T + Sbjct: 181 GLLRMGYDERIAQWLDSTTEGGGMLHAVGQGALAMEIREGDEKTLEIIKPLCHEKTMVAT 240 Query: 231 NCERAFLAELDGSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFH---EVSRNGNRCDAI 286 ERA + L+G C I G L V++ DGK V +A Sbjct: 241 FAERAVMRTLEGGCSVPIGVETKWVGEDQLQLKVTVVSLDGKESVDGQSVEVIKTIEEAE 300 Query: 287 NIGRDAAQYIRFISNKNVFNF 307 +G+ A+ + + + +F Sbjct: 301 AMGQKLAEDLAKRGAQKILDF 321 >gi|254995040|ref|ZP_05277230.1| porphobilinogen deaminase [Anaplasma marginale str. Mississippi] Length = 303 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 96/300 (32%), Positives = 159/300 (53%), Gaps = 4/300 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M R+GTR S LAL A E ++++ P + + + T GD +R L +IGG Sbjct: 1 MYAPVVRLGTRGSTLALIQAEEVKAAIAA--HFPEVRVDVTKIKTSGDVKVDRPLCDIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +EIE+ L++ +ID AVHSAKD+P + L + L R DVFIS +SL Sbjct: 59 KGLFIKEIEEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + IGTSS+RRK LL +R D+ + RG ++TR+ K+ + + I+LA AG+ R+ Sbjct: 119 LPAGAKIGTSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRIS 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E+L+ + + GQGAIC++ ++ ++ +N +++ +V ER+F+ + Sbjct: 179 ARAKITEVLHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAV 238 Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +GSC + +A A + ++ D + R DA ++G + ++ Sbjct: 239 NGSCHTPLAAMARYVDSGLMSMKCMLA-HDSRTMVFAERTFPERDAESVGFEMGVMLKDE 297 >gi|221065751|ref|ZP_03541856.1| porphobilinogen deaminase [Comamonas testosteroni KF-1] gi|220710774|gb|EED66142.1| porphobilinogen deaminase [Comamonas testosteroni KF-1] Length = 314 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 153/289 (52%), Gaps = 8/289 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LA+ A ++ L H++ ++ ++TKGD+I +R L+++GGKGLF Sbjct: 11 IVIATRESQLAMWQAEHVQAILRGR----GHSVDLLGMTTKGDQILDRALSKVGGKGLFV 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E L G D AVHS KD+P +L +G ++ + RED RD F+S+ SL +L + Sbjct: 67 KELEVALEEGRADLAVHSLKDVPMELPEGFVLACVMTREDPRDAFVSNRYASLDELPQGA 126 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSSLRR+ALL R D+ + RG + TRL KL+ + AI+LA AG+ RL+ I Sbjct: 127 VVGTSSLRRQALLQALRPDLKIEALRGNVNTRLRKLDEGQYDAIVLAAAGLMRLEMSDRI 186 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + P+ GQGA+ IE + + + + H TW +V ERA + GSC Sbjct: 187 RARFDPAQMLPAAGQGALGIEVRADRQDIIDALAPLAHMPTWLTVTAERAVSRCMGGSCS 246 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNRCD---AINIGR 290 +A + + L+ +G V + + D A +G Sbjct: 247 MPLAAYGRFESDILHMDAAWGDMEGDKGLVRVQASASVTDFASANALGE 295 >gi|302884312|ref|XP_003041052.1| hypothetical protein NECHADRAFT_81309 [Nectria haematococca mpVI 77-13-4] gi|256721948|gb|EEU35339.1| hypothetical protein NECHADRAFT_81309 [Nectria haematococca mpVI 77-13-4] Length = 332 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 97/314 (30%), Positives = 151/314 (48%), Gaps = 15/314 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA+ A R SL + P I L T GD+ + L G K L+ Sbjct: 10 PLRIGTRRSNLAMVQAEGIRDSLQKI--APDRTFEIEALKTLGDKDKSTALYSFGAKNLW 67 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T E+E+KL SG+ID VH KDMPTKL +++A R+D RD I +LK L Sbjct: 68 TTELEEKLTSGDIDVVVHCLKDMPTKLPDTCELTAIPLRDDPRDALIVKASLPYNNLKTL 127 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRL 179 +V+GTSS+RR A L R + + RG +ETRL K+++ ++ ++++ G++R+ Sbjct: 128 PEGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPESEYTCMIMSACGLQRV 187 Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 I + L +D + GQGA+ +E + K EL+ + + + + ERA L Sbjct: 188 GLGHRITQFLGSKDGGIYHAVGQGALGLEIRKGDTKTLELINQLVDQKSTLACLAERALL 247 Query: 238 AELDGSCKSAIAGFAYCKGST---LYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRD 291 L+G C I + L IV++ DG + + + +A +GR+ Sbjct: 248 RTLEGGCTVPIGVETEWVDESQLLLRMRAIVVSLDGTQSVQDTMDATVKNDDEATALGRE 307 Query: 292 AAQYIRFISNKNVF 305 A + + Sbjct: 308 LAARLAKGGASEIL 321 >gi|238061239|ref|ZP_04605948.1| porphobilinogen deaminase [Micromonospora sp. ATCC 39149] gi|237883050|gb|EEP71878.1| porphobilinogen deaminase [Micromonospora sp. ATCC 39149] Length = 322 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 100/307 (32%), Positives = 163/307 (53%), Gaps = 11/307 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + + ++L + ++ + T GDR ++ + +G G+F Sbjct: 4 PLRLGTRGSALAIAQSGQVAAALTAAT---GREVELVEVVTAGDR-SSAPVHRLG-VGVF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L++ ID AVHS KD+PT GL I+A PR+D RD ++ ++L +L Sbjct: 59 VSALRDALVARTIDLAVHSYKDLPTAAASGLHIAAVPPRQDPRDALVAKGGRTLAELPPG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRLKKE 182 +V+GT +LRR A L + V RG ++TRL ++ + A++LA AG+ RL + Sbjct: 119 AVVGTGALRRIAQLHALGLQLEVTPIRGNVDTRLARVLGPDADLDAVVLARAGLARLGRT 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI E L+ P+P QGA+ +E ++P EL+ V++H + +V ERA LA L+ Sbjct: 179 DVITETLDPMLMLPAPAQGALAVECRADDPDLVELLAVLDHAPSRAAVTAERALLATLEA 238 Query: 243 SCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C + +A +A G +Y G V++SDG +SR G DA IG+ A + Sbjct: 239 GCSAPVAAYAELAEGDVGDEIYLRGAVISSDGTRDLRLSRTGTPADAAEIGKALAAELLE 298 Query: 299 ISNKNVF 305 + ++ Sbjct: 299 LGADSIL 305 >gi|126662834|ref|ZP_01733833.1| hypothetical protein FBBAL38_05745 [Flavobacteria bacterium BAL38] gi|126626213|gb|EAZ96902.1| hypothetical protein FBBAL38_05745 [Flavobacteria bacterium BAL38] Length = 305 Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 90/306 (29%), Positives = 150/306 (49%), Gaps = 9/306 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A + L D+ + II + ++GD I ++ L E+G Sbjct: 1 MS-KIIRIGTRDSELALWQAHTVQKKLNDL----GYKTEIIAVKSQGDIILDKPLYELGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ +++G++D AVHS KD+PT L G+ +A L R + D+ + Sbjct: 56 TGIFTKTLDIGMLNGQVDIAVHSMKDVPTALPIGIVQAAVLERANTLDILVHKGNLDFL- 114 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 I T SLRR+A L + V+D RG + TR+ KLN ++ + + A AG++R+ Sbjct: 115 -TSSGTIATGSLRRQAQWLNKYPNHKVVDLRGNVNTRMQKLNESEWNGAVFAAAGLERIN 173 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + ++++ P+P QGA+ + + E + +N +T ER FL L Sbjct: 174 IKPENY--IDLDWMTPAPAQGAMVVVAMEKDTYCTEALAKLNDRETEICTFIERQFLKTL 231 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C + I A + F G++ + +GK H + ++ N N G D A+ I Sbjct: 232 EGGCSAPIGALAKFTTENIEFEGVLFSLNGKEKHIIKKSCNFDSYKNFGADCAKEILNNG 291 Query: 301 NKNVFN 306 + Sbjct: 292 GAALME 297 >gi|297543913|ref|YP_003676215.1| porphobilinogen deaminase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841688|gb|ADH60204.1| porphobilinogen deaminase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 299 Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 89/300 (29%), Positives = 140/300 (46%), Gaps = 9/300 (3%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK ++GTR S LAL + + + I+ ++T+GD + ++ ++EIGGK Sbjct: 1 MKKVIKVGTRSSELALVQTQMVINEIKKFRQ--DFEFEIVKITTQGDALIDKPVSEIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F +EIE L+ GEID AVHS KDMP ++ KGL++ A L RED +DVF+S DL Sbjct: 59 GVFVKEIESALLKGEIDMAVHSMKDMPYEIPKGLKLMAVLKREDPKDVFVSRDGTQFMDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSSLRR+ L + DI ++ RG + TRL K+ I+L+ AG+ RL Sbjct: 119 KEGAKIGTSSLRRQVQLKALKPDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN-HEDTWDSVNCERAFLAEL 240 E +I E + P+P QG + +E + + T+ + ER L Sbjct: 179 ESIITEYFPPDVVVPAPCQGILAVEIAESFDNIFQEFYPYIVDRRTFFEASVERELLKVF 238 Query: 241 DGSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +C+ +A + + D + G + + + Sbjct: 239 GVNCRQPFGAYAQYRKERDEEKINIKVVYQKED--KLLKSEVTGLIEETDKMIEKLIEEF 296 >gi|298252253|ref|ZP_06976056.1| porphobilinogen deaminase [Ktedonobacter racemifer DSM 44963] gi|297546845|gb|EFH80713.1| porphobilinogen deaminase [Ktedonobacter racemifer DSM 44963] Length = 334 Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 96/320 (30%), Positives = 143/320 (44%), Gaps = 20/320 (6%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K IGTR S LA+ + + P I I + T GDR+T+ L+ IGG G Sbjct: 4 MKRITIGTRASKLAMIQTQWIIERIHQ--QWPGLEIAIEQIRTTGDRVTSVPLSRIGGDG 61 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL---- 118 +F EIE L ID AVHS KD+PT +GL + PRED+RDV +S + Sbjct: 62 VFVTEIESALQERRIDIAVHSLKDLPTAQPEGLCVLTPGPREDVRDVLVSKGDLHISARG 121 Query: 119 ----KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 IGT SLRR A + D ++ RG ++TRL KL + AI+LA A Sbjct: 122 TLEGITPGRAPRIGTCSLRRTAQIRHLCPDAEILSLRGNVDTRLRKLEAGEYDAIILAAA 181 Query: 175 GIKRL---KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 G+ RL + + P+PGQGA+ +E + P +EL+ + + + + Sbjct: 182 GLHRLDLQGTLEGKLSYFPVAQMLPAPGQGALGLEIR-DEPAFRELLAPLQDRNVQAATS 240 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN------GNRCDA 285 ER F+ L C +A A+ L G+V + DG+ V + +A Sbjct: 241 AERMFMRRLGAGCYLPVAAHAHIIDERLVLRGLVTSLDGQRRILVQQETGWNAYAFLENA 300 Query: 286 INIGRDAAQYIRFISNKNVF 305 +G + A+ ++ Sbjct: 301 ERLGIELAEIALAQGAHDII 320 >gi|121608027|ref|YP_995834.1| porphobilinogen deaminase [Verminephrobacter eiseniae EF01-2] gi|121552667|gb|ABM56816.1| porphobilinogen deaminase [Verminephrobacter eiseniae EF01-2] Length = 345 Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 102/311 (32%), Positives = 157/311 (50%), Gaps = 11/311 (3%) Query: 1 MEKK---PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57 M + P I TR S LAL A ++ L H++ ++ ++T+GD+I +R+L++ Sbjct: 1 MSRTRPSPIVIATRASRLALWQAGHVQALLQAR----GHSVQLLGMTTRGDQILDRSLSK 56 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 +GGKGLF +E+E L G D AVHS KDMP +L G ++ L RED RD ++S + Sbjct: 57 VGGKGLFVKELEAALAEGRADIAVHSLKDMPMELPAGFALACVLEREDPRDAWVSPQYAT 116 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L+ L +V+GTSSLRR+ALL R D+ + RG ++TRL KL+ + AI+LA AG+K Sbjct: 117 LEALPPGAVVGTSSLRRQALLQALRPDLRMEPLRGNLDTRLRKLDAGQYQAIVLAVAGLK 176 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL E I+ P+ GQGA+ IE + + H+ +W +V ERA Sbjct: 177 RLGLEARIRAPFAPAALLPAAGQGALGIEVRSERQDLCAALAALAHQPSWLAVAAERAVS 236 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNR---CDAINIGRDAA 293 + GSC +A + G+ L G+ + A +G A Sbjct: 237 RAMGGSCSMPLAAYGQFHGAVLQLDAAWGDPQGQAPLVRAQASATVTTLAQAEALGSALA 296 Query: 294 QYIRFISNKNV 304 + + + + Sbjct: 297 RRLCADGARPL 307 >gi|145592923|ref|YP_001157220.1| porphobilinogen deaminase [Salinispora tropica CNB-440] gi|145302260|gb|ABP52842.1| hydroxymethylbilane synthase [Salinispora tropica CNB-440] Length = 322 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 98/310 (31%), Positives = 159/310 (51%), Gaps = 11/310 (3%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K P R+GTR S LA+A + + +L P + ++ + T GDR + + ++G Sbjct: 1 MKVPLRLGTRGSALAMAQSGQVAEALTAATGTP---VELVEVVTTGDR-STAPVHQLG-V 55 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F + L +G ID AVHS KD+PT GL ++A PR+D RD ++ ++L +L Sbjct: 56 GVFVSALRDALAAGAIDFAVHSYKDLPTAAAPGLYVAAVPPRQDPRDALVATGGRTLAEL 115 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRL 179 + +GT +LRR A L + V RG + TRL ++ A++LA AG+ RL Sbjct: 116 PPGARVGTGALRRIAQLHALGLQLEVQPIRGNVGTRLARVLGPEADLDAVVLARAGLARL 175 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I E L+ P+P QGA+ +E ++ EL+ V++H + +V ERA LA Sbjct: 176 DRTDTITETLDPMLMLPAPAQGALAVECRSDDSALVELLAVLDHAPSRATVVAERALLAT 235 Query: 240 LDGSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 L+ C + +A +A G +Y G V++ DG +SR G DA+ IG+ A Sbjct: 236 LEAGCSAPVAAYAELAEGDVGEEIYLRGAVISPDGTRDLRLSRTGTPADAVEIGKALATD 295 Query: 296 IRFISNKNVF 305 + + ++ Sbjct: 296 LLDLGADSIL 305 >gi|160879516|ref|YP_001558484.1| porphobilinogen deaminase [Clostridium phytofermentans ISDg] gi|160428182|gb|ABX41745.1| porphobilinogen deaminase [Clostridium phytofermentans ISDg] Length = 295 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 94/295 (31%), Positives = 145/295 (49%), Gaps = 6/295 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIG+R S LA+ + S+ H +I + T GD I +++L +IGGKG Sbjct: 1 MRIIRIGSRESELAVRQSRILIDSIKQYHN--EIETELITMKTTGDIILDKSLDKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E++ LI G D +VHS KDMP + + L I A+ RED RD + + D Sbjct: 59 LFVKELDLALIEGRSDLSVHSLKDMPMETPEELPILAFSKREDPRDALVLPLGCTEIDPV 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 IG SS RR L + + RG + TRL KL+ + A++LA AG+KRL E Sbjct: 119 --LPIGCSSQRRMLQLKKIYPGANYKGIRGNVLTRLEKLDRGEYGALVLAAAGLKRLGLE 176 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I I E+ P+ GQG + ++ ++ E +K ++E+ CERAF+ L+G Sbjct: 177 SRISRIFTTEEIIPAAGQGILAVQGRAG--ESYEFLKQFHNEEATFQAVCERAFVKTLNG 234 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C S +A +A + + G+ + + G + DA +G A +R Sbjct: 235 GCSSPVAAYAKVEDEMITVTGLYFDEITGDYITGNLTGKKEDAEQLGEMLANKLR 289 >gi|283798144|ref|ZP_06347297.1| hydroxymethylbilane synthase [Clostridium sp. M62/1] gi|291074124|gb|EFE11488.1| hydroxymethylbilane synthase [Clostridium sp. M62/1] gi|295091711|emb|CBK77818.1| hydroxymethylbilane synthase [Clostridium cf. saccharolyticum K10] Length = 298 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 99/302 (32%), Positives = 149/302 (49%), Gaps = 6/302 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K R+G+R S LA+ A ++ P + ++ + T GDRI N++L +IGGK Sbjct: 1 MNKKVRVGSRDSLLAVRQAELVMEAVRKAS--PETELTLVTMKTTGDRILNQSLDKIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E++ L+ G D +VHS KDMP ++ + L I AY PRED RDV + + L +L Sbjct: 59 GLFVKELDLALMEGRSDLSVHSLKDMPMEIPEELPILAYSPREDNRDVLVLR--EGLSEL 116 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 H VIGT S RRK R D RG I TRL KL++ + A++LA AG+ R+ Sbjct: 117 PAHPVIGTGSARRKIQAARIYPDAEFKGIRGNIHTRLRKLDSGEYDALILAAAGMIRMGL 176 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I ++E+ P GQG + ++ + + IN + ER+F+ LD Sbjct: 177 QDRISRYFSVEEIIPPAGQGIMAVQ--GRKDDSYPFLIKINSPKSQAMAEAERSFVKTLD 234 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C S IA A +G L G+ + S G+ +GR A ++ Sbjct: 235 GGCSSPIAACALIEGDRLKLRGLYFEEKSGRWVVGSLEGSVQGPAELGRSLALRLKSEIE 294 Query: 302 KN 303 + Sbjct: 295 QE 296 >gi|254778943|ref|YP_003057048.1| porphobilinogen deaminase [Helicobacter pylori B38] gi|254000854|emb|CAX28786.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Helicobacter pylori B38] Length = 306 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 102/307 (33%), Positives = 156/307 (50%), Gaps = 7/307 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK IG+R S LAL A + L I + TKGD+I + L +IGG Sbjct: 1 MEK--LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L Sbjct: 56 KGLFTKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMS 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL Sbjct: 116 LPKGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLN 175 Query: 181 KE-KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ ++E+ PS GQGA+ +E N+ L + +N E++ + ER F+ Sbjct: 176 IQGAKYRKAFSVEEMIPSMGQGALGVEMLKNHKHFITL-QKLNDEESAFCCHLEREFIKG 234 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I A G + ++ +GK + G++ A ++ ++ + Sbjct: 235 LNGGCQIPIGVHASLMGDGVKIQAVLGLPNGKEVITKEKRGDKTKAFDLIQELLEEFLQS 294 Query: 300 SNKNVFN 306 K + Sbjct: 295 GAKEILE 301 >gi|87306341|ref|ZP_01088488.1| porphobilinogen deaminase [Blastopirellula marina DSM 3645] gi|87290520|gb|EAQ82407.1| porphobilinogen deaminase [Blastopirellula marina DSM 3645] Length = 308 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 105/302 (34%), Positives = 157/302 (51%), Gaps = 7/302 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A L V ++ II ++T+GD L IGG+G+FT Sbjct: 4 IRIGTRGSQLAQWQANWVADQLRAV----GTDVEIIHIATQGDVTQG-PLDLIGGRGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EI+ L+ ID AVHS KD+PT+ + GL+++A R DV I+ A + L S Sbjct: 59 TEIQAALLDNRIDVAVHSLKDLPTEAVVGLRLAAVPARGADGDVLITSKASDVLGLPQES 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +IGT S+RRKA LL R D + D RG ++TRL KL++ AI+LA AG++RL+ + I Sbjct: 119 IIGTGSMRRKAQLLHLRRDFQIRDIRGNLDTRLRKLDDGLYDAIILAEAGLRRLELIERI 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + ++ P+ GQGA+ +E + ++ +NHED+ SV ER+ L L G C Sbjct: 179 RHVIPKAQMLPAVGQGALGLEIRERDSATAAMLAPLNHEDSHYSVLAERSMLRNLRGGCL 238 Query: 246 SAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 + + + L+ G+V++ DG S G A +IGR A + + Sbjct: 239 APVGAWGRIDPIKQLLFLDGVVVSGDGHHKVTASACGPPNRAEDIGRQVADQLAIQGAER 298 Query: 304 VF 305 + Sbjct: 299 LI 300 >gi|221633109|ref|YP_002522334.1| porphobilinogen deaminase [Thermomicrobium roseum DSM 5159] gi|221155998|gb|ACM05125.1| porphobilinogen deaminase [Thermomicrobium roseum DSM 5159] Length = 560 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 167/296 (56%), Gaps = 5/296 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RIG+R S LALA E L + +P ++ ++P+ T GDR +LT +GG Sbjct: 1 MAAR-IRIGSRGSTLALAQTEEVVERLRRL--VPECSVTVVPIVTTGDRDRATSLTVLGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F +E+ + L++G ID AVHSAKD+PT+L GL + A L RED RDV ++ + L + Sbjct: 58 SGVFAKELHEALLAGTIDLAVHSAKDLPTQLPPGLVLVAVLAREDARDVLVTSPPRKLGE 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSS RR+ALL R R D+ V+D RG ++TRL KL A++L AG++RL Sbjct: 118 LPAGARVGTSSRRRQALLQRARPDLIVVDIRGNVDTRLRKLREGIVDALVLGAAGLRRLS 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + ++ E L+ ++F P+PGQGA+ + + EL+ ++ ++V ERAFLA Sbjct: 178 QADLVAEYLDPDEFVPAPGQGALAV-VARESDGRLELLSRLDEPLVHEAVAVERAFLAAF 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C + +A G+ L F VL DG F + R +AI R+ + Sbjct: 237 GSGCSVPLGAYATIAGNRLRFRIAVLLPDG-RFISQCLDWPREEAIERARELGLTL 291 >gi|309775730|ref|ZP_07670726.1| hydroxymethylbilane synthase [Erysipelotrichaceae bacterium 3_1_53] gi|308916493|gb|EFP62237.1| hydroxymethylbilane synthase [Erysipelotrichaceae bacterium 3_1_53] Length = 299 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 112/299 (37%), Positives = 157/299 (52%), Gaps = 3/299 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LALA E R L + + P H + +STKGDR + L ++ KG+F Sbjct: 3 IRMGTRGSALALAQCKEVRDRLQEAY--PQHTFELCVISTKGDRNQHVALDQMKDKGIFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE++L+ G ID AVHS KDMP+ L L + L RED RDV + TA +L+ L H+ Sbjct: 61 KEIEQQLLEGTIDLAVHSMKDMPSTLDARLCFTKTLLREDARDVLVLRTAPTLEQLPPHA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 I T S RR LLR R+D+ ++ RG IETRL KL + I+LA AG+KRLK + I Sbjct: 121 RIATGSKRRSYQLLRQRNDLEIVGIRGNIETRLRKLEEQQLDGIVLAAAGLKRLKLKPYI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L P+ QGA+ IE +LV + + V ERAFL EL+G C Sbjct: 181 TQTLKECIMVPAVAQGALAIEVCKEREDLIQLVNALCDPALDEEVCAERAFLQELNGGCH 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI-SNKN 303 + + +T+ Y + DG ++ +G R A+ + AA +R K Sbjct: 241 TPLGARCILHDTTVELYAVYGNEDGTRLKQLHVSGAREQAVELAIQAAAVLREQVGGKQ 299 >gi|222823771|ref|YP_002575345.1| porphobilinogen deaminase [Campylobacter lari RM2100] gi|254800239|sp|B9KGA9|HEM3_CAMLR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|222538993|gb|ACM64094.1| porphobilinogen deaminase [Campylobacter lari RM2100] Length = 308 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 97/302 (32%), Positives = 157/302 (51%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LAL + ++ L H I + TKGD + + L +IGGKGLFT Sbjct: 3 LIIATRKSQLALWQSEYIKNKLSQTHS--DLEISLEGFKTKGDVLLDSPLAKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ ++ G+ AVHS KD+P+ KGL ++A RE++ D F+S +SL L + Sbjct: 61 KELEESMLRGDSHLAVHSLKDVPSFFPKGLVLAAISKREEVNDAFLSEYYESLNALPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE--K 183 +GT+SLRR+ LL R D+++I RG I +RL KL + AI+LA+AGIKRL E Sbjct: 121 KVGTTSLRRRMQLLALRPDLNIISLRGNINSRLEKLKAKEFDAIILAFAGIKRLGLEKQI 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + +++ P+ QGA+ IE +++ + + ++ +N ++ + + ER F+ L+G Sbjct: 181 KFVKKFELDEMIPAASQGALGIE-SIDDKQILKYLECLNDKNAFVETHIERDFIKTLEGG 239 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I A + IV D + R ++ D G A+ + K Sbjct: 240 CQVPIGINAKIIDEKIEIRAIVGLPDASKILKEKRMIDKQDYAKAGELLAKEMIAKGAKE 299 Query: 304 VF 305 + Sbjct: 300 IL 301 >gi|317179367|dbj|BAJ57155.1| porphobilinogen deaminase [Helicobacter pylori F30] Length = 306 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 98/302 (32%), Positives = 154/302 (50%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECS---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-V 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E + K ++ +N E++ + ER F+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KSHKHFATLQKLNDEESAFCCHLERKFIKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A ++ ++ + K + Sbjct: 240 QIPIGVHASLTGDRVKIRAVLGLPNGKEVITKEKQGDKTRAFDLIQELLEAFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|325286453|ref|YP_004262243.1| porphobilinogen deaminase [Cellulophaga lytica DSM 7489] gi|324321907|gb|ADY29372.1| porphobilinogen deaminase [Cellulophaga lytica DSM 7489] Length = 525 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 103/307 (33%), Positives = 152/307 (49%), Gaps = 9/307 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A +S L + I+ + + GD ++ L E+G Sbjct: 1 MS-KIIRIGTRDSELALYQANRVKSELETL----GFKTKIVAVKSAGDLELDKPLYELGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT ++ ++ GEID AVHS KD+PT L KG+ +A L R +++D + + Sbjct: 56 TGIFTRTLDIAMLKGEIDIAVHSLKDVPTVLPKGIVQAAVLERGNVKDTLVYKNNEEFLG 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNKAHAILLAYAGIKRL 179 I TSSLRRKA L V D RG + TRL KL ++ + + A AGI RL Sbjct: 116 ARDGV-IATSSLRRKAQWLNRYPTHKVEDIRGNVNTRLQKLEDSETWNGAIFAAAGIGRL 174 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 +E +N++ P+PGQGAI + + + + + INH +T ER FL Sbjct: 175 NL--RPEEAVNLDWMIPAPGQGAIMVTAKEDEEEILAICEEINHRETEICTTIERTFLNR 232 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C + I AY K + F ++L+ DG EV R D N+ +AA+++ Sbjct: 233 LEGGCTAPIGALAYIKSEQVIFRAVLLSPDGTKKIEVDRLVKLGDHNNLAIEAAEHVLER 292 Query: 300 SNKNVFN 306 K + Sbjct: 293 GGKYIME 299 >gi|282865645|ref|ZP_06274696.1| porphobilinogen deaminase [Streptomyces sp. ACTE] gi|282559689|gb|EFB65240.1| porphobilinogen deaminase [Streptomyces sp. ACTE] Length = 328 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 95/315 (30%), Positives = 159/315 (50%), Gaps = 17/315 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KP R+GTR S LA+A + ++ +V + ++ ++T GD ++ L +IGG G Sbjct: 12 TKPLRLGTRRSKLAMAQSGMVADAVREVT---GRAVELVEITTYGD-VSREHLAQIGGTG 67 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F + + L GE+D AVHS KD+PT +GL ++A RED RDV ++ + L Sbjct: 68 VFVAALREALARGEVDFAVHSLKDLPTTQPEGLVLAAVPVREDPRDVLVARDGLTFAQLP 127 Query: 123 LHSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 + IGT S RR A L + D+ + RG ++TR+N + + A++LA AG+ R Sbjct: 128 SGARIGTGSPRRMAQLNAYARSHGLDMETVAIRGNVDTRINFVRTGELDAVVLAAAGLSR 187 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + + + L+ + P+PGQGA+ IE ++ + + ++ T +V ERA LA Sbjct: 188 LGRTGEVTDFLSTDTVLPAPGQGALAIECAEDSTELAAALAELDDPHTRVAVTAERALLA 247 Query: 239 ELDGSCKSAIAGFAYC--KG---STLYFYGIVLASDGKIFHEVSRNGNR----CDAINIG 289 L+ C + + A G + L G+V ++DG ++S G+ DA G Sbjct: 248 ALEAGCSAPVGALADLLADGQIVNELRLRGVVGSTDGTSLVQLSITGSVPTSHDDAAAFG 307 Query: 290 RDAAQYIRFISNKNV 304 R+ A + + Sbjct: 308 RELASEMLAKGAAGL 322 >gi|237736083|ref|ZP_04566564.1| porphobilinogen deaminase [Fusobacterium mortiferum ATCC 9817] gi|229421794|gb|EEO36841.1| porphobilinogen deaminase [Fusobacterium mortiferum ATCC 9817] Length = 299 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 105/301 (34%), Positives = 153/301 (50%), Gaps = 8/301 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIG 59 KK IG+R S LALA + + L P + I + T GD+ N ++ Sbjct: 1 MKKKIVIGSRGSILALAQSEIVKQQLEK--NFPEYEFEIKKIVTSGDKDLVSNWNNSDKS 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 K FT+EIE +L++ ID AVHS KDMP+ +GL A RED RDV IS ++L Sbjct: 59 LKSFFTKEIEVELLNETIDLAVHSMKDMPSISPEGLICGAIPDREDQRDVLISKNGKTLM 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L +++GTSSLRR + R D+ + RG I TRLNKL AILLA AG+KR+ Sbjct: 119 ELPKGAIVGTSSLRRTMNIKSLRPDLQIKQLRGNIHTRLNKLKTEDYDAILLAAAGLKRV 178 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E I E L+ + F P+P QG + I+ N+ + + ++K I+ ED V ER F Sbjct: 179 GLENEITEYLDPKIFLPAPAQGVLHIQCRENDEEIKNILKTIHKEDIKKIVVIEREFSKI 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASD-GKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 DG C + + ++ G + FYG+ + G + S + I + + A I+ Sbjct: 239 FDGGCHTPMGCYSEVNGDKITFYGVYFKDNLG---YTASITEKLSEGIRVAQKLADTIKE 295 Query: 299 I 299 Sbjct: 296 K 296 >gi|305433096|ref|ZP_07402252.1| hydroxymethylbilane synthase [Campylobacter coli JV20] gi|304443797|gb|EFM36454.1| hydroxymethylbilane synthase [Campylobacter coli JV20] Length = 308 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 96/305 (31%), Positives = 146/305 (47%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR S LAL + L H + + TKGD + + L +IGGKG Sbjct: 1 MKELVIATRKSQLALWQSEFIADFLNKTH---GIAVRLEGFKTKGDVLLDSPLAKIGGKG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L Sbjct: 58 LFTKELEESMLRNEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLP 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IGT+SLRRK LL R D+ +I RG + +R+ KL N AI+LA AGIKRL + Sbjct: 118 KGAKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNGDFDAIILAMAGIKRLDLD 177 Query: 183 KVIK--EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K + + ++ P+ QGA+ IE+ + + +K +N ++ ER F++ L Sbjct: 178 KQVNFVYTFSKDELIPAASQGALGIESIDDEKFL-KFLKCLNDDNALIETTIEREFISTL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I A G + I+ DG + R + D G A+ Sbjct: 237 EGGCQVPIGINAELLGDEICVRAILGLPDGSEILKEKRMIKKSDFKGFGESLAKEFIAKG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKELL 301 >gi|255725590|ref|XP_002547724.1| porphobilinogen deaminase [Candida tropicalis MYA-3404] gi|240135615|gb|EER35169.1| porphobilinogen deaminase [Candida tropicalis MYA-3404] Length = 340 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 91/314 (28%), Positives = 151/314 (48%), Gaps = 19/314 (6%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG R S LA+ + + ++ D P + I+ LST GD++ + L GGK L+T+E Sbjct: 16 IGGRKSKLAVVQSELVKKAIED--TFPNLSCSILALSTLGDKVQTQPLYTFGGKSLWTKE 73 Query: 68 IEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLK 119 +E L+ ++D VHS KDMPT L + ++ RED RD + +SLK Sbjct: 74 LEILLLDSIDEYPQLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAVVMKSGSPYKSLK 133 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIK 177 DL +++GTSS+RR + L++ + RG I+TRLNKL+ N+ ++LA AG+ Sbjct: 134 DLPAGAIVGTSSIRRSSQLIKNYPHLRFESVRGNIQTRLNKLDQPDNEYCCLILASAGLI 193 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I ++D + GQGA+ IE + K + +++ I ER+ + Sbjct: 194 RLGLGDRITSF--LDDMYYAVGQGALGIEIRRGDDKVKPILQKIEDPIATVCCLAERSLM 251 Query: 238 AELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDA 292 L+G C + + T L GI+++ DG ++ E D +G + Sbjct: 252 RYLEGGCSVPLGVNSNYNEDTQELTLKGIIVSPDGSVWIEDEVVKTINCNEDCEQVGIEL 311 Query: 293 AQYIRFISNKNVFN 306 ++ K + + Sbjct: 312 GDKLKAKGAKEILD 325 >gi|225025796|ref|ZP_03714988.1| hypothetical protein EUBHAL_00021 [Eubacterium hallii DSM 3353] gi|224956880|gb|EEG38089.1| hypothetical protein EUBHAL_00021 [Eubacterium hallii DSM 3353] Length = 844 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 159/289 (55%), Gaps = 6/289 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K +IGTR S LAL + + P + I+ + TKGD+I +++LT GGK Sbjct: 1 MKNIIKIGTRKSKLALIQTDIVKDKIKKA--FPEIEVEIVKIDTKGDQILDKSLTSFGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT E+E +L+SG +D AVHSAKDMP +GL I A L R D+RD F++ T + L++L Sbjct: 59 GVFTAELEAELLSGAVDIAVHSAKDMPMDFPEGLGIGAVLDRADVRDTFVTTTGKKLEEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 S++GTSSLRR+ L+ +++ RG ++TRL+KL + + I+LA AGI+RL Sbjct: 119 EPGSIVGTSSLRRELLIKEINPYVTIKLLRGNVQTRLSKLRDGQYDGIILAAAGIERLGY 178 Query: 182 EKV---IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 EK + L+ + F P+ GQG + +E+ V + + E++ I+ E + ERAFL Sbjct: 179 EKEEGLHYQYLDPDVFLPAAGQGILAVESRVEDAEMAEILAAIHSEKAECLLMAERAFLK 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 + GSC + A + + + DG + N DAI Sbjct: 239 TIGGSCNAPAAALCREENGEFSMRAMYVK-DGIHSRKTYMTVNIEDAIA 286 >gi|57238255|ref|YP_178664.1| porphobilinogen deaminase [Campylobacter jejuni RM1221] gi|121612975|ref|YP_001000245.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 81-176] gi|148925915|ref|ZP_01809602.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni CG8486] gi|167005201|ref|ZP_02270959.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 81-176] gi|205355401|ref|ZP_03222172.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni CG8421] gi|81557551|sp|Q5HVM1|HEM3_CAMJR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|158513884|sp|A1VYQ4|HEM3_CAMJJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|57167059|gb|AAW35838.1| porphobilinogen deaminase [Campylobacter jejuni RM1221] gi|87250005|gb|EAQ72963.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 81-176] gi|145844901|gb|EDK22005.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni CG8486] gi|205346635|gb|EDZ33267.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni CG8421] gi|284925807|gb|ADC28159.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni IA3902] gi|315057963|gb|ADT72292.1| Porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni S3] Length = 307 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 101/303 (33%), Positives = 153/303 (50%), Gaps = 6/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LAL + L + H+ +++ TKGD + + L +IGGKGLF Sbjct: 2 KLIIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L Sbjct: 59 TKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGT+SLRRK LL R D+ +I RG + +R+ KL NN AI+LA AGIKRL +K Sbjct: 119 AKIGTTSLRRKMQLLLLRPDLDIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQ 178 Query: 185 IKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + ++ P+ QGA+ IE +N+ K EL+K +N E+ + ER F+A L+G Sbjct: 179 VNFVYEFSKDELIPAASQGALGIE-SINDEKILELLKCLNDENALIETSIEREFIATLEG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I A G + ++ DG + R + D G A+ K Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIKKNDFKGFGESLAKEFIAKGAK 297 Query: 303 NVF 305 + Sbjct: 298 ELL 300 >gi|86148990|ref|ZP_01067222.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni CF93-6] gi|86153229|ref|ZP_01071433.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni HB93-13] gi|88597145|ref|ZP_01100381.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 84-25] gi|218562197|ref|YP_002343976.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|12643831|sp|Q9PHW9|HEM3_CAMJE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|85840348|gb|EAQ57605.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni CF93-6] gi|85842955|gb|EAQ60166.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni HB93-13] gi|88190834|gb|EAQ94807.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 84-25] gi|112359903|emb|CAL34691.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315927042|gb|EFV06397.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315928698|gb|EFV07978.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 305] Length = 307 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 101/303 (33%), Positives = 153/303 (50%), Gaps = 6/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LAL + L + H+ +++ TKGD + + L +IGGKGLF Sbjct: 2 KLIIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L Sbjct: 59 TKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGT+SLRRK LL R D+ +I RG + +R+ KL NN AI+LA AGIKRL +K Sbjct: 119 AKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQ 178 Query: 185 IKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + ++ P+ QGA+ IE +N+ K EL+K +N E+ + ER F+A L+G Sbjct: 179 VNFVYEFSKDELIPAASQGALGIE-SINDEKILELLKCLNDENALIETSIEREFIATLEG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I A G + ++ DG + R + D G A+ K Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIKKNDFKGFGESLAKEFIAKGAK 297 Query: 303 NVF 305 + Sbjct: 298 ELL 300 >gi|157414826|ref|YP_001482082.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 81116] gi|172047086|sp|A8FKW8|HEM3_CAMJ8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157385790|gb|ABV52105.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 81116] gi|307747464|gb|ADN90734.1| Porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni M1] gi|315931740|gb|EFV10695.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 327] Length = 307 Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats. Identities = 101/303 (33%), Positives = 153/303 (50%), Gaps = 6/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LAL + L + H+ +++ TKGD + + L +IGGKGLF Sbjct: 2 KLIIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L Sbjct: 59 TKELEESMLRKEAHLAVHSLKDVPSFFPRGLVLAAVSKREQSNDAMLSQNYKDFLSLPKG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGT+SLRRK LL R D+ +I RG + +R+ KL NN AI+LA AGIKRL +K Sbjct: 119 AKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQ 178 Query: 185 IKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + ++ P+ QGA+ IE +N+ K EL+K +N E+ + ER F+A L+G Sbjct: 179 VNFVYEFSKDELIPAASQGALGIE-SINDEKILELLKCLNDENALIETSIEREFIATLEG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I A G + ++ DG + R + D G A+ K Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIKKNDFKGFGESLAKEFIAKGAK 297 Query: 303 NVF 305 + Sbjct: 298 ELL 300 >gi|41056087|ref|NP_957448.1| hydroxymethylbilane synthase a [Danio rerio] gi|31419559|gb|AAH53268.1| Hydroxymethylbilane synthase a [Danio rerio] Length = 358 Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats. Identities = 111/334 (33%), Positives = 159/334 (47%), Gaps = 34/334 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA +L ++ P + I+ +ST GD+I + L++IG K L Sbjct: 17 RVIRMGTRKSQLARIQTDSVAGTLKQLY--PDVRLEIVAMSTIGDKILDTALSKIGEKSL 74 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLKD 120 FT+E+E L E+D VHS KD+PT L G I A L RE+ D + H +L Sbjct: 75 FTKELENALERNEVDIVVHSLKDLPTSLPPGFTIGAILERENPHDAVVLHPKNAGLTLDS 134 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 L SVIGTSSLRR A L + + + RG + TRL KL+ + AI+LA AG+KR+ Sbjct: 135 LPEKSVIGTSSLRRAAQLKKRFPQLEFENIRGNLNTRLKKLDEKDDYAAIILAAAGLKRM 194 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E I ++L ED + GQGA+ +E + E+V V++H DT ERAFL + Sbjct: 195 GWESRISQVLGPEDCMYAVGQGALAVEVRAQDKDILEMVSVLHHPDTVLRCISERAFLKQ 254 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR--------------------- 278 L+G C +A KGS LY G V + DG + + Sbjct: 255 LEGGCSVPVAVHTEVKGSMLYLTGAVYSLDGADCLKDTMQTCVELDNKVNESTQRSANVG 314 Query: 279 -------NGNRCDAINIGRDAAQYIRFISNKNVF 305 + A +G D A + K++ Sbjct: 315 VTACNISSSALEAAEKLGLDLANVLLNKGAKDIL 348 >gi|123210215|emb|CAM15095.1| hydroxymethylbilane synthase [Danio rerio] Length = 358 Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats. Identities = 111/334 (33%), Positives = 160/334 (47%), Gaps = 34/334 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA +L ++ P ++ I+ +ST GD+I + L++IG K L Sbjct: 17 RVIRMGTRKSQLARIQTDSVAGTLKQLY--PDVHLEIVAMSTIGDKILDTALSKIGEKSL 74 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLKD 120 FT+E+E L E+D VHS KD+PT L G I A L RE+ D + H +L Sbjct: 75 FTKELENALERNEVDIVVHSLKDLPTSLPPGFTIGAILERENPHDAVVLHPKNAGLTLDS 134 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 L SVIGTSSLRR A L + + + RG + TRL KL+ + AI+LA AG+KR+ Sbjct: 135 LPEKSVIGTSSLRRAAQLKKRFPQLEFENIRGNLNTRLKKLDEKDDYAAIILAAAGLKRM 194 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E I ++L ED + GQGA+ +E + E+V V++H DT ERAFL + Sbjct: 195 GWESRISQVLGPEDCMYAVGQGALAVEVRAQDKDILEMVSVLHHPDTVLRCISERAFLKQ 254 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR--------------------- 278 L+G C +A KGS LY G V + DG + + Sbjct: 255 LEGGCSVPVAVHTEVKGSMLYLTGAVYSLDGADCLKDTMQTCVELDNKVNESTQRSANVG 314 Query: 279 -------NGNRCDAINIGRDAAQYIRFISNKNVF 305 + A +G D A + K++ Sbjct: 315 VTACNISSSALEAAEKLGLDLANVLLNKGAKDIL 348 >gi|329764682|ref|ZP_08256278.1| porphobilinogen deaminase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138828|gb|EGG43068.1| porphobilinogen deaminase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 308 Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats. Identities = 102/301 (33%), Positives = 161/301 (53%), Gaps = 5/301 (1%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG R S L+LA S L + P + I + TKGD R L I KG+F +E Sbjct: 2 IGARGSQLSLAQTKLVISELKKIT--PDVDFEIKSIKTKGDTD-ARPLFTIDQKGIFEKE 58 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 I++ + GE+D AVHS KD+P++L++ L +++ RE + D+FIS +L + +VI Sbjct: 59 IDRAVADGEVDFAVHSLKDVPSQLVENLTLASIPKREMVNDIFISSDGTTLDSIKSGAVI 118 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR + R RSD++V RG IETR+ K+ + I+LA AGI RL + V Sbjct: 119 GTSSLRRAVQITRKRSDVTVRPIRGNIETRIKKVTDKIFDGIVLAQAGISRLGID-VQYT 177 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 L+I+DF PSPGQGA+ I + + ++K I D+ + ER+ +D C+ Sbjct: 178 PLSIQDFSPSPGQGALAIVSRKDESSTISMLKKIEDTDSRLEIEAERSLSDFVDSGCRFP 237 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV-FN 306 I +A G+ + + DGK V ++G++ D ++G+ + + ++ N Sbjct: 238 IGAYAKSNGNQMTLSVSAFSVDGKKSLFVEKSGDKNDPFSLGKSVGEELHKKGVNDLAIN 297 Query: 307 F 307 + Sbjct: 298 W 298 >gi|114797250|ref|YP_761901.1| porphobilinogen deaminase [Hyphomonas neptunium ATCC 15444] gi|123128354|sp|Q0BX92|HEM3_HYPNA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|114737424|gb|ABI75549.1| porphobilinogen deaminase [Hyphomonas neptunium ATCC 15444] Length = 321 Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats. Identities = 116/307 (37%), Positives = 168/307 (54%), Gaps = 8/307 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K R+GTR SPLALA A + + ++ I+ +T GD++T L GGKGL Sbjct: 11 KRLRLGTRGSPLALAQAHQIADGIRAASAG-AYDCEIVAFTTTGDKLTTERLINSGGKGL 69 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT E++ L GE+D AVHS KD+P+ L G +A+ RED RD F+SH A+S++DL Sbjct: 70 FTRELDDALSRGELDLAVHSLKDVPSVLPPGQIFAAFPKREDPRDGFLSHGAKSIQDLPE 129 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GT+SLRR+A L R D+ V+ FRG + TR+ KL A A LA AG+ RL + Sbjct: 130 GATLGTASLRREAQALALRPDLKVVTFRGNVATRMRKLEEGLADATFLAMAGLTRLGLSE 189 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNP-KAQELVKVINHEDTWDSVNCERAFLAELDG 242 V + +ED P+ GQG I + T + + E++ ++HE + + ERAFL +LDG Sbjct: 190 VAT-PIPLEDMLPAAGQGIIGVVTRDDVDTELLEILGQLSHEPSRVAAIAERAFLEKLDG 248 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR--NGNRCDA--INIGRDAAQYIRF 298 SC++ IA + +G G VL+ G + DA + +GR AQ I F Sbjct: 249 SCRTPIAAHLFDRGDEWQLIGEVLSPGGTTRWRGDGVCRKDATDAQLVLLGRAVAQEIIF 308 Query: 299 ISNKNVF 305 + K Sbjct: 309 -AAKEAL 314 >gi|294496111|ref|YP_003542604.1| hydroxymethylbilane synthase [Methanohalophilus mahii DSM 5219] gi|292667110|gb|ADE36959.1| hydroxymethylbilane synthase [Methanohalophilus mahii DSM 5219] Length = 308 Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats. Identities = 95/301 (31%), Positives = 155/301 (51%), Gaps = 8/301 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IGTR S LALA A L+D P + T GD T+R L E+ G G F Sbjct: 1 MIIGTRGSDLALAQAKTV-EGLLDSRGFPTTR---KIIKTSGDTFTDRPLHEVEGVGAFV 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E++ +++SGEID AVHS KD+PT+ L I+A + R+ D+ +++ +L +L + Sbjct: 57 RELDDRMLSGEIDIAVHSMKDLPTERPAELSIAAVIERDSPHDLLLTNDGSTLDELPEGA 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GT+S+RR+A LR+R D+ V D RG I TRL KL + AI+LA AG++R+ + Sbjct: 117 IVGTTSMRRRAQFLRYRPDLDVQDLRGNINTRLKKLESGMYDAIILAEAGLQRMGWDIE- 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ ++F PS QG I + T +A+ L I+H ++ + ER + +++G C Sbjct: 176 CHRLDGDNFCPSANQGTIAVVTLAGG-EAELLCSQIDHTESRIATEVERLVIRDVEGGCI 234 Query: 246 SAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 + FA G+ ++ +L+ DGK + + + + + K Sbjct: 235 VPVGSFAEFVDNGNKIHIRAEILSLDGKRDIRLDEIIPVDNYREHAEKLGKKLVAMGGKE 294 Query: 304 V 304 + Sbjct: 295 L 295 >gi|86151766|ref|ZP_01069980.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 260.94] gi|315124067|ref|YP_004066071.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841395|gb|EAQ58643.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 260.94] gi|315017789|gb|ADT65882.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 307 Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats. Identities = 100/303 (33%), Positives = 153/303 (50%), Gaps = 6/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LAL + L + H+ +++ TKGD + + L +IGGKGLF Sbjct: 2 KLIIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L Sbjct: 59 TKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGT+SLRRK LL R D+ +I RG + +R+ KL NN AI+LA AGIKRL +K Sbjct: 119 AKIGTTSLRRKMQLLLLRPDLDIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQ 178 Query: 185 IKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + ++ P+ QGA+ IE +N+ K EL++ +N E+ + ER F+A L+G Sbjct: 179 VNFVYEFSKDELIPAASQGALGIE-SINDEKILELLECLNDENALIETSIEREFIATLEG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I A G + ++ DG + R + D G A+ K Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIKKNDFKGFGESLAKEFIAKGAK 297 Query: 303 NVF 305 + Sbjct: 298 ELL 300 >gi|68171155|ref|ZP_00544563.1| Porphobilinogen deaminase [Ehrlichia chaffeensis str. Sapulpa] gi|88657743|ref|YP_507506.1| porphobilinogen deaminase [Ehrlichia chaffeensis str. Arkansas] gi|123722778|sp|Q2GGC7|HEM3_EHRCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|67999425|gb|EAM86066.1| Porphobilinogen deaminase [Ehrlichia chaffeensis str. Sapulpa] gi|88599200|gb|ABD44669.1| porphobilinogen deaminase [Ehrlichia chaffeensis str. Arkansas] Length = 298 Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats. Identities = 109/292 (37%), Positives = 160/292 (54%), Gaps = 5/292 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+A E ++ L P ++ I+ + T GD L+ IGGK LF Sbjct: 3 IRIGTRGSILAIAQTLEIKNLL--NRYFPEISVQIVKIKTSGDINNQVPLSAIGGKSLFI 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G++D AVHS KD+P +GL I L R DVFIS + +K L L++ Sbjct: 61 KEIEEALLMGKVDLAVHSVKDIPAFYCEGLIIPCVLKRNSPYDVFISSKHKDIKSLPLNA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS+RRK L R D+ V+ RG I+TR+ K N + I+LA AG+ R+ + VI Sbjct: 121 TIGTSSVRRKVQLNYLRPDLQVVPVRGNIDTRILKANVGEFDGIVLAEAGLIRINRCDVI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 KEIL+ + + GQGAI I+ V++ +KV+N ++ V ER+FL ++GSC Sbjct: 181 KEILSPKIMLSAVGQGAIGIQCRVDDHSIINKIKVLNCHQSYVCVMAERSFLKTINGSCD 240 Query: 246 SAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + +A A Y T++ ++ K S N CDA G + + + Sbjct: 241 TPLAALAQYVNNDTIHMSCMLANE--KNMVFASCCFNECDAEKSGINMGKKL 290 >gi|119490987|ref|XP_001263154.1| porphobilinogen deaminase Hem3, putative [Neosartorya fischeri NRRL 181] gi|119411314|gb|EAW21257.1| porphobilinogen deaminase Hem3, putative [Neosartorya fischeri NRRL 181] Length = 331 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 103/313 (32%), Positives = 153/313 (48%), Gaps = 13/313 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA+A A R SL + +P + I L T GDR L G K L+ Sbjct: 11 PLRIGTRRSNLAMAQAEGIRDSLQKI--VPDRSYEIEALRTLGDRDQLTALYSFGAKSLW 68 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T E+E+KL SGE+D VH KDMPTKL +++A PR+D RD I SLK L Sbjct: 69 TTELEEKLTSGELDVIVHCLKDMPTKLPDTCELAAIPPRDDPRDALIVKAGLPYTSLKSL 128 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRL 179 +V+GTSS+RR A L R + + RG +ETRL K+++ + ++++ AG++R+ Sbjct: 129 PEGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPDSEYTCMVMSAAGLERV 188 Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + I + L D + GQGA+ +E + K QEL+ + + + + ER+ + Sbjct: 189 GLKHRISQYLGSRDGGILHAVGQGALGLEIRKGDRKMQELLGQLADQKSTLACLAERSLM 248 Query: 238 AELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAA 293 L+G C I L IV++ DG E S +A +G + A Sbjct: 249 RTLEGGCSVPIGVETEWMPSGDLRMNAIVVSLDGTRSVEDSITSRVEVVDEADALGEELA 308 Query: 294 QYIRFISNKNVFN 306 + + N Sbjct: 309 GRLVKAGAGKILN 321 >gi|57167590|ref|ZP_00366730.1| porphobilinogen deaminase [Campylobacter coli RM2228] gi|57020712|gb|EAL57376.1| porphobilinogen deaminase [Campylobacter coli RM2228] Length = 308 Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats. Identities = 95/305 (31%), Positives = 150/305 (49%), Gaps = 6/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K I TR S LAL + L + H+ +++ TKGD + + L +IGGKG Sbjct: 1 MKELVIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L Sbjct: 58 LFTKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLP 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IGT+SLRRK LL R D+ +I RG + +R+ KL N AI+LA AGIKRL + Sbjct: 118 KGAKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNGDFDAIILAMAGIKRLDLD 177 Query: 183 KVIK--EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K + + ++ P+ QGA+ IE +++ + E +K +N ++ ER F++ L Sbjct: 178 KQVNFVYTFSKDELIPAASQGALGIE-SIDDEQILEFLKCLNDDNALIETTIEREFISTL 236 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C+ I A + I+ DG + R + + G A+ Sbjct: 237 EGGCQVPIGINAELLNDEICVRAILGLPDGSEILKEKRMIKKSEFKGFGESLAKEFIAKG 296 Query: 301 NKNVF 305 K + Sbjct: 297 AKEIL 301 >gi|158320361|ref|YP_001512868.1| porphobilinogen deaminase [Alkaliphilus oremlandii OhILAs] gi|167008809|sp|A8MGE4|HEM3_ALKOO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|158140560|gb|ABW18872.1| porphobilinogen deaminase [Alkaliphilus oremlandii OhILAs] Length = 296 Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats. Identities = 92/293 (31%), Positives = 144/293 (49%), Gaps = 7/293 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+G+R S LA+ + ++ P I ++ + T GD ++TL +IGGKGLF Sbjct: 2 KIRVGSRESKLAVKQSEIVIEAIRKY--DPNIEIELVTMKTTGDIKLDQTLDKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+++ L +D VHS KDMP + + L I A RED RDV + +++K+ Sbjct: 60 IKELDQALYDDRVDITVHSFKDMPMAIDEYLPIVAVSKREDPRDVLVLP--KTVKEPDFS 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IG SS RRK L SV RG + TRL KL+ + AI LA AG+KRL E+ Sbjct: 118 KPIGCSSFRRKIQLQEIYPHCSVEPIRGNVLTRLEKLDRGEFSAITLALAGLKRLGLEER 177 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I I + + P+ QG I ++ + + ++ WD ER+F+ L+G C Sbjct: 178 ISRIFEVTEILPAACQGVIVVQARKGFD--VSFLSDFHDKEAWDISMAERSFVRTLNGGC 235 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 S +A + K + L G+ + S H+ + G R +G + A ++ Sbjct: 236 SSPVAAYGEIKDNYLTLTGLYVDSSNS-VHKKTITGARKQGEEMGFNLALQMK 287 >gi|209155902|gb|ACI34183.1| Porphobilinogen deaminase [Salmo salar] Length = 358 Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats. Identities = 107/334 (32%), Positives = 151/334 (45%), Gaps = 33/334 (9%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LA L ++ P ++ I+ +ST GD+I + L++IG K Sbjct: 17 NRVIRMGTRKSQLARIQTDYVAEKLKTLY--PDVHLEIVAMSTIGDKILDTALSKIGEKS 74 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119 LFT+E+E L E+D VHS KD+PT L G I A L RE D + H +L Sbjct: 75 LFTKELENALERNEVDLVVHSLKDLPTTLPNGFTIGAVLQRESPHDAVVLHPKNSGLTLD 134 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKR 178 L SVIGTSSLRR A L + + D RG + TRL KL+ AI+LA AG+KR Sbjct: 135 TLPDGSVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDEKEDYAAIILAAAGLKR 194 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E + ++L ED + GQGA+ +E + E+V ++H +T ERAFL Sbjct: 195 MGWEARVSQVLGPEDCMYAVGQGALAVEVRARDCDILEMVSTLHHSETVLRCIAERAFLR 254 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--------------- 283 L+G C +A K S L G V + DG + + N Sbjct: 255 RLEGGCSVPVAVNTEVKDSVLSLTGAVYSLDGADSLKEAMETNVDPGNKLESAADIQHVG 314 Query: 284 ------------DAINIGRDAAQYIRFISNKNVF 305 A +G D A + + Sbjct: 315 VTAHNVPQCAQVAAEKLGVDLADLLLSKGAMEIL 348 >gi|283955967|ref|ZP_06373457.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 1336] gi|283792627|gb|EFC31406.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 1336] Length = 307 Score = 211 bits (538), Expect = 8e-53, Method: Composition-based stats. Identities = 100/303 (33%), Positives = 155/303 (51%), Gaps = 6/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LAL + L + H+ +++ TKGD + + L +IGGKGLF Sbjct: 2 KLIIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L Sbjct: 59 TKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGT+SLRRK +L R D+ +I RG + +R+ KL NN+ AI+LA AGIKRL +K Sbjct: 119 AKIGTTSLRRKMQILLLRPDLEIISLRGNVNSRIEKLKNNEFDAIILAMAGIKRLNLDKQ 178 Query: 185 IK--EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + ++ P+ QGA+ IE +N+ K EL+K +N E+ + ER F+A L+G Sbjct: 179 VNFVYGFSKDELIPAASQGALGIE-SINDEKILELLKCLNDENALIETSIEREFIATLEG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I A G + ++ DG+ + R + D G A+ K Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGREILKDKRMIKKDDFKGFGESLAKEFIAKGAK 297 Query: 303 NVF 305 + Sbjct: 298 ELL 300 >gi|307728969|ref|YP_003906193.1| porphobilinogen deaminase [Burkholderia sp. CCGE1003] gi|307583504|gb|ADN56902.1| porphobilinogen deaminase [Burkholderia sp. CCGE1003] Length = 307 Score = 211 bits (538), Expect = 8e-53, Method: Composition-based stats. Identities = 99/291 (34%), Positives = 155/291 (53%), Gaps = 5/291 (1%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + A + +L ++ P + I+ ++T+GD+I +RTL+++GGKGLF +E+E L G Sbjct: 1 MWQAEHVQCALHKLY--PSCEVKILGMTTRGDQILDRTLSKVGGKGLFVKELEAALADGR 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 D AVHS KD+P +L G +S + RED RD +S+ SL L +V+GTSSLRR+A Sbjct: 59 ADLAVHSLKDVPMELPPGFALSTIMEREDPRDALVSNHYDSLAALPAGAVVGTSSLRREA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 +L + V RG ++TRL KL+ AI+LA AG+KRL I+ +L+ +D P Sbjct: 119 MLRMRYPHLEVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLGDRIRALLDPQDSLP 178 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + GQGA+ IE + + ++HE T +V ER L GSC+ +A +A Sbjct: 179 AAGQGALGIEIRADRADLAAWLTPLHHEHTAAAVEAERMVSRALGGSCEVPLAAYAEWHD 238 Query: 257 STLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYIRFISNKNV 304 L+ G+V DG+ + A+ +GR+ A + + Sbjct: 239 GALHLRGVVATPDGRRVLSAQASAPAPTVERAVALGREVANALEQQGAMEI 289 >gi|159036094|ref|YP_001535347.1| porphobilinogen deaminase [Salinispora arenicola CNS-205] gi|157914929|gb|ABV96356.1| porphobilinogen deaminase [Salinispora arenicola CNS-205] Length = 322 Score = 211 bits (538), Expect = 8e-53, Method: Composition-based stats. Identities = 96/307 (31%), Positives = 156/307 (50%), Gaps = 11/307 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + + +L P + ++ + T GDR + + +G G+F Sbjct: 4 PLRLGTRGSALAMAQSGQVAQALTAATGNP---VELVEVVTAGDR-SAAPVHRLG-VGVF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L + ID AVHS KD+PT GL ++A PR+D RD ++ ++L +L Sbjct: 59 VSALRDALTARTIDFAVHSFKDLPTAAAPGLHVAAVPPRQDPRDALVARAGRTLAELPPG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRLKKE 182 + +GT +LRR A L + V RG + TRL ++ A++LA AG+ RL + Sbjct: 119 ARVGTGALRRIAQLHALGLQLDVQPIRGNVGTRLARVLGPEADLDAVVLARAGLARLDRT 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E L+ P+P QGA+ +E ++ EL+ V++H + +V ERA LA L+ Sbjct: 179 DTITETLDPMLMLPAPAQGALAVECRSDDSDLVELLAVLDHAPSRATVVAERALLATLEA 238 Query: 243 SCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C + +A +A G +Y G V++ DG +SR G DA+ IG+ A + Sbjct: 239 GCSAPVAAYAELAEGDVGEEIYLRGAVISPDGTRDLRLSRTGTPADAVEIGKALAADLLE 298 Query: 299 ISNKNVF 305 + ++ Sbjct: 299 LGADSIL 305 >gi|317012081|gb|ADU82689.1| porphobilinogen deaminase [Helicobacter pylori Lithuania75] Length = 306 Score = 211 bits (538), Expect = 8e-53, Method: Composition-based stats. Identities = 98/303 (32%), Positives = 151/303 (49%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IG+R S LAL A + L I + TKGD+I + L +IGGKGLF Sbjct: 3 KLVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L Sbjct: 60 TKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK- 183 + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 120 AKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ ++E+ PS GQGA+ +E N K ++ +N + ER F+ L+G Sbjct: 180 KYRKAFSVEEMIPSMGQGALGVEML-KNHKHFATLQKLNDAKSAFCCRLEREFIKGLNGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I A G + ++ +GK + G++ A ++ ++ + K Sbjct: 239 CQIPIGVHASLVGDRVKIQAVLGLPNGKEVITKEKQGDKTKAFDLVQELLEEFLQSGAKE 298 Query: 304 VFN 306 + Sbjct: 299 ILE 301 >gi|313901685|ref|ZP_07835116.1| porphobilinogen deaminase [Thermaerobacter subterraneus DSM 13965] gi|313468036|gb|EFR63519.1| porphobilinogen deaminase [Thermaerobacter subterraneus DSM 13965] Length = 362 Score = 211 bits (538), Expect = 8e-53, Method: Composition-based stats. Identities = 104/326 (31%), Positives = 161/326 (49%), Gaps = 23/326 (7%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR S LA A L H P + ++P++T GDR +R L + Sbjct: 1 MTAAVLRIGTRASALARIQAQWVARQLETHH--PGLRVELVPVTTLGDRNRSRPLYALSS 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK- 119 G F +E+E+ L+ G ID AVHSAKD+PT+L +GL+++A+ RED D + + + Sbjct: 59 PGAFVKELEEALLEGRIDLAVHSAKDVPTRLPEGLELAAFPQREDPADALVIPRPATGRL 118 Query: 120 --------------------DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159 L + +GTSSLRR+A L R D++V RG ++TRL Sbjct: 119 SVRGPGGEEPPGSEARDLLAALPPGARVGTSSLRRQAWLRARRPDLAVEPARGNLDTRLR 178 Query: 160 KLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219 +L+ A+LLA AG++RL I ++ + P+PGQGA+ +E + + V+ Sbjct: 179 RLDEGHWDALLLAAAGLRRLGFAGRISALVPPLELLPAPGQGALAVEIRAGDEAVRRRVQ 238 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 V++ + +V ERAFLAEL G+C+ + +A +G + G+V G + Sbjct: 239 VLDRPEVSRAVRAERAFLAELGGTCRVPLGAWARVQGGRIVIDGMVAGPAGSPWLSGRGE 298 Query: 280 GNRCDAINIGRDAAQYIRFISNKNVF 305 G+ D GR A+ + V Sbjct: 299 GSLSDPEGTGRRLAEQLLAKGAAGVL 324 >gi|170691941|ref|ZP_02883105.1| porphobilinogen deaminase [Burkholderia graminis C4D1M] gi|170143225|gb|EDT11389.1| porphobilinogen deaminase [Burkholderia graminis C4D1M] Length = 318 Score = 211 bits (538), Expect = 8e-53, Method: Composition-based stats. Identities = 104/291 (35%), Positives = 159/291 (54%), Gaps = 5/291 (1%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E+E L G Sbjct: 1 MWQAEHVRCALHKLY--PSCDVKILGMTTRGDQILDRTLSKVGGKGLFVKELEAALADGR 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 D AVHS KD+P +L G +S + RED RD +S+ SL L +V+GTSSLRR+A Sbjct: 59 ADLAVHSLKDVPMELPAGFALSTIMEREDPRDALVSNDYDSLAALPAGAVVGTSSLRREA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 +L + V RG ++TRL KL+ AI+LA AG+KRL E I+ +L+ ED P Sbjct: 119 MLRMRYPHLEVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEGRIRALLDPEDSLP 178 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + GQGA+ IE + + + ++HE T +V ER L GSC+ +A +A Sbjct: 179 AAGQGALGIEIRSDRAELAAWLAPLHHEHTAAAVEAERMVSRVLGGSCEVPLAAYATWHD 238 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISNKNV 304 L+ GIV DG+ + AI +GR+ A + ++ Sbjct: 239 GALHLRGIVATPDGQRVLSAQASAPAPTTERAIALGREVANALEQQGAMDI 289 >gi|328883227|emb|CCA56466.1| Porphobilinogen deaminase [Streptomyces venezuelae ATCC 10712] Length = 328 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 89/326 (27%), Positives = 153/326 (46%), Gaps = 26/326 (7%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ R+GTR S LA+A + ++ + P + ++ ++T GD L +IGG Sbjct: 1 MTERALRLGTRRSKLAMAQSGHVADAVRRLTGRP---VELVEITTYGDTSR-EHLAQIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + L++ E+D AVHS KD+PT L ++A RED RDV I+ +L Sbjct: 57 TGVFVAALRDALLADEVDFAVHSLKDLPTAQHPDLVLAAIPEREDPRDVLIARDGLTLDR 116 Query: 121 LALHSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + +GT S RR A L + DI+ + RG ++TR+ + + A++LA AG+ Sbjct: 117 LPEGARVGTGSPRRMAQLHAYARNHGLDITCVPIRGNVDTRVGYVRKGELDAVVLAAAGL 176 Query: 177 KRLKKEKV-----IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 R+ E L ++ P+PGQGA+ +E +N + + ++ T +V Sbjct: 177 NRIGGTDELLGGLSAEPLPVDTVLPAPGQGALAVECLASNTELVAALAPLDDPLTRAAVT 236 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNR 282 ER+ LA L+ C + + A + G+V +DG ++S G Sbjct: 237 AERSLLAALEAGCSAPVGALADLLADDPGHGQVVTEMRLRGVVGTTDGSTLVQLSTTGPV 296 Query: 283 ----CDAINIGRDAAQYIRFISNKNV 304 +A+ +GR+ A + + Sbjct: 297 PTSHDEAMALGRELADEMLAKGAAGL 322 >gi|317180043|dbj|BAJ57829.1| porphobilinogen deaminase [Helicobacter pylori F32] Length = 306 Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats. Identities = 100/302 (33%), Positives = 156/302 (51%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECS---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E N K ++ +N E++ + ERAF+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KNHKHFATLQKLNDEESAFCCHLERAFIKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A+++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIRAVLGLPNGKEVITKEKQGDKTKALDLVQELLEAFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|148554852|ref|YP_001262434.1| porphobilinogen deaminase [Sphingomonas wittichii RW1] gi|148500042|gb|ABQ68296.1| porphobilinogen deaminase [Sphingomonas wittichii RW1] Length = 308 Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats. Identities = 110/290 (37%), Positives = 153/290 (52%), Gaps = 4/290 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P R+GTR SPLAL A ++L H + I+ + T GDRI +R L E+GGK L Sbjct: 7 RPLRLGTRGSPLALTQARMVIAALRAAHGWDETAVEIVAIKTSGDRIQDRALAEVGGKAL 66 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +T+E++ L G ID AVHS KD+ T + I+A LPR D+RD I A SL L Sbjct: 67 WTKELDIALADGTIDFAVHSMKDVETIRPAAIVIAAMLPRADVRDRLI--GAASLAALPQ 124 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSS RR A + R R D+ ++ FRG ++TRL KL +A A LLA AG+ RL ++ Sbjct: 125 GARVGTSSPRRSAQVRRARPDVGIVLFRGNVDTRLGKLAAGEAEATLLAGAGLIRLGRD- 183 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I + IE+ P+P Q A+ IET + L+ I+ T SV+ ERA LA L Sbjct: 184 EIGHPIPIEEMLPAPAQAAVGIETLAERTDVRALLGAIDDAPTNASVSAERALLAALGAD 243 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS-RNGNRCDAINIGRDA 292 C+S +A A G+ L ++ DG DA + Sbjct: 244 CRSPVAALAVRSGAGLLLRAEIMTEDGSEHRSGEAMLFETGDAAALAHRL 293 >gi|217033471|ref|ZP_03438901.1| hypothetical protein HP9810_1g85 [Helicobacter pylori 98-10] gi|216944176|gb|EEC23604.1| hypothetical protein HP9810_1g85 [Helicobacter pylori 98-10] Length = 306 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 99/302 (32%), Positives = 155/302 (51%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECF---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E N K ++ +N E++ + ER F+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KNHKHFTTLQKLNDEESAFCCHLEREFIKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A+++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIRAVLGLPNGKEVITKEKQGDKTKALDLVQELLEAFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|317181546|dbj|BAJ59330.1| porphobilinogen deaminase [Helicobacter pylori F57] Length = 306 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 100/305 (32%), Positives = 157/305 (51%), Gaps = 5/305 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K IG+R S LAL A + L I + TKGD+I + L +IGGKG Sbjct: 1 MKKLVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDAPLNKIGGKG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L Sbjct: 58 LFTKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLP 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 118 KGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQ 177 Query: 183 -KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 ++ ++E+ PS GQGA+ +E + K ++ +N E++ + ERAF+ L+ Sbjct: 178 GAKYRKAFSVEEMIPSMGQGALGVEML-KSHKHFATLQKLNDEESAFCCHLERAFVKGLN 236 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C+ I A G + ++ +GK + G++ A+++ ++ + Sbjct: 237 GGCQIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKALDLVQELLEAFLQSGA 296 Query: 302 KNVFN 306 K + Sbjct: 297 KEILE 301 >gi|254382514|ref|ZP_04997873.1| porphobilinogen deaminase 1 [Streptomyces sp. Mg1] gi|194341418|gb|EDX22384.1| porphobilinogen deaminase 1 [Streptomyces sp. Mg1] Length = 322 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 90/320 (28%), Positives = 156/320 (48%), Gaps = 20/320 (6%) Query: 1 MEKK---PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57 M + P R+GTR S LA++ + ++ + P + ++ ++T GD ++ L + Sbjct: 1 MNPRLDQPLRLGTRRSKLAMSQSGHVADAVRAITGRP---VELVEITTYGD-VSREHLAQ 56 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 IGG G+F + L+ GEID AVHS KD+PT L I+A PRED RD ++ + Sbjct: 57 IGGTGVFVTALRDALLRGEIDFAVHSLKDLPTTQPDDLVIAAMPPREDPRDALVARDGLT 116 Query: 118 LKDLALHSVIGTSSLRRKALLLR----WRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173 + L + +GT S RR A L I + RG ++TR+ + N + A++LA Sbjct: 117 FEQLPDGARVGTGSPRRMAQLNHAARALGKRIETVAIRGNVDTRIGFVRNGELDAVVLAA 176 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG+ R+ + + L+++ P+PGQGA+ +E ++ + + ++ T +V E Sbjct: 177 AGLNRIGRSDEATDFLSVDSVLPAPGQGALAVECLASDAELIAALAELDDPHTRAAVTAE 236 Query: 234 RAFLAELDGSCKSAIAGFAYC--KG---STLYFYGIVLASDGKIFHEVSRNGNR----CD 284 R+ LA L+ C + + A G + + G+V DG ++S G D Sbjct: 237 RSLLAALEAGCSAPVGALADLLADGQIVNEMRLRGVVGTLDGTTLVQLSTTGPVPQSYDD 296 Query: 285 AINIGRDAAQYIRFISNKNV 304 A+ +GR+ A + + Sbjct: 297 AMALGRELADEMLAKGAAGL 316 >gi|283954165|ref|ZP_06371690.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 414] gi|283794444|gb|EFC33188.1| porphobilinogen deaminase [Campylobacter jejuni subsp. jejuni 414] Length = 307 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 99/303 (32%), Positives = 152/303 (50%), Gaps = 6/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LAL + L H+ +++ TKGD + + L +IGGKGLF Sbjct: 2 KLIIATRKSQLALWQSEYIAQILKKTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L Sbjct: 59 TKELEESILRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSKNYKDFLSLPKG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT+SLRRK LL R D+ +I RG + +R+ KL N + AI+LA AGIKRL +K Sbjct: 119 ARVGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNGEFDAIILAMAGIKRLSLDKQ 178 Query: 185 IKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + ++ P+ QGA+ IE +N+ K EL+K +N E+ + ER F+A L+G Sbjct: 179 VNFVYEFSKDELIPAASQGALGIE-SINDEKILELLKCLNDENALIETSIEREFIATLEG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I A G + ++ DG + R + D G A+ K Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMICKSDFKGFGESLAKEFIAKGAK 297 Query: 303 NVF 305 + Sbjct: 298 ELL 300 >gi|300774730|ref|ZP_07084593.1| hydroxymethylbilane synthase [Chryseobacterium gleum ATCC 35910] gi|300506545|gb|EFK37680.1| hydroxymethylbilane synthase [Chryseobacterium gleum ATCC 35910] Length = 302 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 105/302 (34%), Positives = 156/302 (51%), Gaps = 8/302 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RIGTR S LAL A E L + + + I+P+ + GD+ N+ L +G G Sbjct: 1 MKSIRIGTRNSALALWQAREVARHLQNNNYL----TEIVPIVSSGDKNLNQPLYSLGITG 56 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT +++ L++ EID AVHS KD+PT+L + +++ AYL R+ +D+ I + K+ Sbjct: 57 VFTRDLDIALLNDEIDIAVHSLKDVPTQLPQNIEMIAYLERDYPQDILIRKESSRNKEF- 115 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + TSSLRR+A LR D RG I+TRL KL A +L+ AGIKR+K E Sbjct: 116 HELKLATSSLRRRAFWLRNYPTAEFSDIRGNIQTRLQKLEEGDFDATILSLAGIKRMKME 175 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + +P QG I + H + P+ E+V+ INH++T V ER FL+ L+G Sbjct: 176 IDYEM---LPLMISAPSQGVISVAGHTDKPEINEIVRQINHQETQICVEIERNFLSTLEG 232 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C + I FA G + F + + DGK V N A N G A+ + K Sbjct: 233 GCTAPIGAFAEIIGDQIRFKAALCSLDGKNCIAVDENFVYTPAENFGEKYAKVVLENGGK 292 Query: 303 NV 304 + Sbjct: 293 EL 294 >gi|302543510|ref|ZP_07295852.1| hydroxymethylbilane synthase [Streptomyces hygroscopicus ATCC 53653] gi|302461128|gb|EFL24221.1| hydroxymethylbilane synthase [Streptomyces himastatinicus ATCC 53653] Length = 322 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 95/313 (30%), Positives = 158/313 (50%), Gaps = 17/313 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + ++ ++ P + ++ ++T GD + L +IGG G+F Sbjct: 8 PLRLGTRRSALAMAQSGLIADAVRELTGRP---VELVEITTYGDVSREQ-LAQIGGTGVF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L+SGEID AVHS KD+PT +GL ++A RED RD I+ + + L Sbjct: 64 VSALREALLSGEIDFAVHSLKDLPTAEPEGLTLAAIPRREDPRDALIARDGLTFEQLPPG 123 Query: 125 SVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + IGT S RR A L W D+ + RG + TR+ + + + A++LA AG+ RL Sbjct: 124 ARIGTGSPRRAAQLNAWARSVGLDVETVPIRGNVGTRIGYVRSGELDAVVLAAAGLSRLG 183 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + EIL+ + P+PGQGA+ +E ++ + L+ ++ T +V ER+ LA L Sbjct: 184 RIGEATEILDADHVLPAPGQGALAVECAADDAELTALLAGLDDPHTRAAVTAERSLLAAL 243 Query: 241 DGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGRD 291 + C + + A G + G+V +DG ++S G A ++GR+ Sbjct: 244 EAGCSAPVGALADLLGDGQVVTEMRLRGVVGTTDGTTLVQLSTTGPVPASPDQAADLGRE 303 Query: 292 AAQYIRFISNKNV 304 A + + Sbjct: 304 LAAEMLAKGAAGL 316 >gi|163754811|ref|ZP_02161933.1| porphobilinogen deaminase (hemC) [Kordia algicida OT-1] gi|161325752|gb|EDP97079.1| porphobilinogen deaminase (hemC) [Kordia algicida OT-1] Length = 526 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 98/307 (31%), Positives = 155/307 (50%), Gaps = 9/307 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K+ RIGTR S LAL A + L H ++P+ GD + ++ L E+G Sbjct: 1 MSKR-IRIGTRDSELALWQAKVVQEQLE----FLGHKTELVPVKATGDLVLDKPLYELGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT ++ +++ +ID AVHS KD+PT L KG+ +A L R ++RD + + Sbjct: 56 TGIFTRTLDIAMLNNDIDIAVHSLKDVPTILPKGIVQAAVLKRGNVRDTLVFKNNEEFLS 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNKAHAILLAYAGIKRL 179 ++VI T SLRRKA L ++ D RG + TRL KL + + + A AG+ R+ Sbjct: 116 QR-NAVIATGSLRRKAQWLHRYPTHTIEDLRGNVNTRLQKLADTEHWNGAIFAAAGLGRI 174 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 +E +N+E P+P QGAI I + + + + INHE+T + ER FL Sbjct: 175 GL--RPEESVNLEWMIPAPAQGAIMITALEADEEIRAICAEINHEETEICTSIERKFLNL 232 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C + I AY K + G++L++DG V+R + ++ + YI Sbjct: 233 LEGGCTAPIGAIAYIKDEVVTLEGVLLSTDGTKRIYVTRYEKLGEHHDLAEYCSNYIIER 292 Query: 300 SNKNVFN 306 K + + Sbjct: 293 GGKRLMD 299 >gi|308061591|gb|ADO03479.1| porphobilinogen deaminase [Helicobacter pylori Cuz20] Length = 306 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 98/302 (32%), Positives = 155/302 (51%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECS---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E + K ++ +N E++ + ER F+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KSHKHFATLQKLNDEESAFCCHLEREFIKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A+++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIRAVLGLPNGKEVIAKEKQGDKTKALDLVQELLEAFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|238563412|ref|ZP_00438929.2| hydroxymethylbilane synthase [Burkholderia mallei GB8 horse 4] gi|238520765|gb|EEP84222.1| hydroxymethylbilane synthase [Burkholderia mallei GB8 horse 4] Length = 393 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 77 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 134 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 135 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 194 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 195 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 254 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC Sbjct: 255 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 314 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYIRFISN 301 + +A A +G L+ G V +DG H +R DA+ +GR + + Sbjct: 315 EVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGA 374 Query: 302 KNVFN 306 + + + Sbjct: 375 RAIVD 379 >gi|326336014|ref|ZP_08202190.1| hydroxymethylbilane synthase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691811|gb|EGD33774.1| hydroxymethylbilane synthase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 308 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 98/303 (32%), Positives = 148/303 (48%), Gaps = 7/303 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK RIGTR S LAL A + +S L + + ++P+ ++GD + L +G Sbjct: 1 MKKTLRIGTRDSELALWQARKVQSLLEAL----GYPTTLVPVKSQGDLTLDIPLYTMGIT 56 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT+ ++ ++ G ID AVHS KD+PT L KG+ A L R +++DV + Sbjct: 57 GVFTKVLDVAMLQGVIDIAVHSMKDVPTTLPKGIIKGAILKRANVQDVLVYKENLDFLSH 116 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + I T SLRRKA LR V + RG I TRL KL+ + + A A ++RL Sbjct: 117 TH-ATIATGSLRRKAQWLRRFPTHLVENLRGNINTRLEKLHKSPWQGAIFAAAALERL-- 173 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 +K ++ P+P QGAI + + + +E + +IN + T N ER FL L+ Sbjct: 174 DKKEVNAFPLDWMTPAPAQGAIMVVSKAEDTYTKEALALINDQPTDIETNIERRFLKRLE 233 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 G C + I A G T+ F G + + DGK EV + + D N A I Sbjct: 234 GGCTAPIGAKATLDGKTISFVGNLFSLDGKHAIEVKKTISLDDIENFPEACADEILLKGG 293 Query: 302 KNV 304 ++ Sbjct: 294 ADL 296 >gi|260654411|ref|ZP_05859901.1| hydroxymethylbilane synthase [Jonquetella anthropi E3_33 E1] gi|260631044|gb|EEX49238.1| hydroxymethylbilane synthase [Jonquetella anthropi E3_33 E1] Length = 714 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 89/297 (29%), Positives = 147/297 (49%), Gaps = 9/297 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 +P R+ +R S LA+A + L + ++ IIP T+GD + +R L GGKGL Sbjct: 424 RPLRLASRESELAMAQSRLVAERLHEATGF---DVEIIPFRTRGDAVADRRLESAGGKGL 480 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F +E+E+ ++SG+ D AVHS KDMP+ GL +A + R+ D + + Sbjct: 481 FVKELERAILSGQADLAVHSLKDMPSSCPDGLAFAALMDRQTAFDCLVLRPGLT----GR 536 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 IGTSS RR A SD + RG + TRL+KL+ + A++LA AG++RL ++ Sbjct: 537 PVRIGTSSARRIAQGRALFSDAQFVPLRGNLRTRLSKLDGGEFDALILAEAGLRRLGLQE 596 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + + + + PS GQG + ++ + P +LV ++ ERAF+ L+G Sbjct: 597 RVSRVFSADQMIPSAGQGTLAVQCPFDGP-VFDLVSQLDEPAVRTCCLAERAFIDRLNGG 655 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C + +A G T+ G+ + DGK +G D ++ + A ++ Sbjct: 656 CTAPHGAYARVDGETIEMIGLYVRPDGKT-LSGKISGPAADGPSLAAELADRLKRRG 711 >gi|188527044|ref|YP_001909731.1| porphobilinogen deaminase [Helicobacter pylori Shi470] gi|238058919|sp|B2US69|HEM3_HELPS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|188143284|gb|ACD47701.1| porphobilinogen deaminase [Helicobacter pylori Shi470] Length = 306 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 100/302 (33%), Positives = 155/302 (51%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECS---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-V 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E + K ++ +N E++ + ERAF+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KSHKHFATLQKLNDEESAFCCHLERAFVKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK R G++ A ++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIRAVLGLPNGKEVIAKERQGDKTKAFDLVQELLEAFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|19703980|ref|NP_603542.1| porphobilinogen deaminase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|25453023|sp|Q8RFP5|HEM3_FUSNN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|19714161|gb|AAL94841.1| Porphobilinogen deaminase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 298 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 107/300 (35%), Positives = 144/300 (48%), Gaps = 7/300 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT--LTEIG 59 KK IG+R S LALA A + L P + I + T GD+ ++I Sbjct: 1 MKKNIIIGSRGSILALAQANLVKDRLQ--GNYPNLSFEIKEIVTSGDKDLKSNWENSDIS 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 K FT+EIE++L+ GEID AVHS KDMP K L A RED RDV +S + Sbjct: 59 LKSFFTKEIEQELLDGEIDIAVHSMKDMPAVSAKSLICGAIPDREDPRDVLVSKNGLLVT 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 119 -LPQGAKVGTSSLRRAMNLKTVRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRT 177 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I E LN E FPP+P QG + I+ N+ + +E++K I++E V ER F Sbjct: 178 GLADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKEILKSIHNEAIAKIVEIEREFSKI 237 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DG C + + ++ G + F + L GK + I AA+ I+ Sbjct: 238 FDGGCHTPMGCYSQVNGDKIKFTAVYLDE-GKQ-IRAVVEDDLAKGKEIAYMAAEEIKNK 295 >gi|256380712|ref|YP_003104372.1| porphobilinogen deaminase [Actinosynnema mirum DSM 43827] gi|255925015|gb|ACU40526.1| porphobilinogen deaminase [Actinosynnema mirum DSM 43827] Length = 313 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 95/310 (30%), Positives = 146/310 (47%), Gaps = 17/310 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RIGTR S LALA +L + I+ +ST GDR ++ + EIG Sbjct: 1 MNRTLRIGTRGSALALAQTGTVAEALRAA----GAQVEIVTVSTPGDR-SHAPIAEIGI- 54 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT + L GE+D AVHS KD+PT L ++A RED RD ++ +L +L Sbjct: 55 GVFTSALRDALAHGEVDVAVHSYKDLPTAPDTRLSLAAIPQREDPRDALVARDGLTLGEL 114 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 S +GT S RR L + ++ RG I++R+ ++ + + A++LA AGI RL + Sbjct: 115 PPGSKVGTGSPRRATQLAALGLGLEILPIRGNIDSRMARVFDGELDAVVLARAGISRLGR 174 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETH-VNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I E+L+ P+P QGA+ IE + L ++ + +V ERA LA L Sbjct: 175 VENITEVLDPIQMLPAPAQGALAIECRVDDVDTEHLLRSTLDDSASRAAVTAERAMLAAL 234 Query: 241 DGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 + C + + A + G+V A DG S G+ A +GR Sbjct: 235 EAGCSAPVGALADVVEDLDDEGAAVLRISLRGVVAAEDGD-LLRASATGDLTAAEELGRA 293 Query: 292 AAQYIRFISN 301 A + +S Sbjct: 294 LAAELLDLSG 303 >gi|224372609|ref|YP_002606981.1| porphobilinogen deaminase [Nautilia profundicola AmH] gi|223588468|gb|ACM92204.1| porphobilinogen deaminase [Nautilia profundicola AmH] Length = 291 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 105/296 (35%), Positives = 161/296 (54%), Gaps = 11/296 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LAL A +S L + H I + ++T GD+I ++ L EIGGKGLF Sbjct: 2 KLTIATRGSKLALWQAEWVKSKLEKL----GHEIDLKIVTTTGDKILDKPLAEIGGKGLF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLL-KGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E+E+ L+ G+ AVHS KD PT+ ++A RE + DVF+S ++L +L Sbjct: 58 IKEVEEALLKGDAQIAVHSLKDFPTQYETDHFTLAAIPVREAVEDVFLSENFETLAELPH 117 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK--K 181 ++V+GTSS+RR L +R D+ + D RG ++TR+NKL + K AI+LA+AG+KRL K Sbjct: 118 NAVVGTSSIRRAMQLKAFRDDLVITDLRGNVDTRINKLKDGKYDAIILAHAGVKRLGLLK 177 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E+L+ + P+ GQGA+ IET N+PK E VK +N T V ER F+ L+ Sbjct: 178 SVKYFEVLDTDIMIPAMGQGALGIETI-NDPKVIEAVKPLNDFRTQICVTIERDFVDTLN 236 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C + + +A ++ +L D + + + N G++ A+ Sbjct: 237 LGCHAPVGVYAKIMADDSIKIKAALLKDD--KMIKKEVVISFDEWENAGKEFAKEF 290 >gi|25026992|ref|NP_737046.1| porphobilinogen deaminase [Corynebacterium efficiens YS-314] gi|259508525|ref|ZP_05751425.1| hydroxymethylbilane synthase [Corynebacterium efficiens YS-314] gi|39931582|sp|Q8FSF7|HEM3_COREF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|23492272|dbj|BAC17246.1| putative hydroxymethylbilane synthase [Corynebacterium efficiens YS-314] gi|259163875|gb|EEW48429.1| hydroxymethylbilane synthase [Corynebacterium efficiens YS-314] Length = 299 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 85/304 (27%), Positives = 139/304 (45%), Gaps = 10/304 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA A R L + + ++T GD + + IG G+F Sbjct: 2 TLRIGTRGSKLATTQAGHMRDRLKHF----GRDAELTIVTTPGDVNMS-PVERIG-VGVF 55 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+ + L++ EID AVHS KD+PT + R D RD I+ +L++L Sbjct: 56 TQALRDALVADEIDVAVHSFKDLPTAPDPRFHL-VVPTRADARDALIARDGLTLEELPEG 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTS+ RR + L R D+ ++ RG I+TR+ K+ + + A++LA+AG+ R+ + Sbjct: 115 AKVGTSAPRRISQLKALRPDLEILPLRGNIDTRMGKVTSGELDAVVLAFAGLSRVGMQDR 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ + + P+P QGA+ IE V + + ++ H DT+ + ER L L+ C Sbjct: 175 ATQVFDPDMLMPAPAQGALAIECRVEDEDIITGLNMLMHADTYVTAVAERTVLNRLEAGC 234 Query: 245 KSAIAGFAYCK---GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 + +A A G T+ V A DG S G + A + Sbjct: 235 TAPVAAHATLDGYAGDTMTLTAGVFALDGSEQLVFSAQGAGERPEELAEQVAAQLIEQGA 294 Query: 302 KNVF 305 + Sbjct: 295 ATLL 298 >gi|296138401|ref|YP_003645644.1| porphobilinogen deaminase [Tsukamurella paurometabola DSM 20162] gi|296026535|gb|ADG77305.1| porphobilinogen deaminase [Tsukamurella paurometabola DSM 20162] Length = 318 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 15/310 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA A R +L+ H ++ ++T GD ++ + +IG G+F Sbjct: 14 PLRIGTRGSLLATTQAGTVRDALIAA----GHPAELVIVTTPGDLSSD-PVEKIG-VGVF 67 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T + L +GE+D AVHS KD+PT L ++A PRED RD ++ L +L Sbjct: 68 TSALRDALANGEVDVAVHSYKDLPTAPDDRLVLAAVPPREDSRDALVARDGMVLGELPAG 127 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SV+GTSS RR L + + RG +++RL K+ + + AI++A AG+KR+ + Sbjct: 128 SVVGTSSPRRATQLTALGLGLEIRPLRGNLDSRLRKVADGELDAIVVALAGLKRIGRHDE 187 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E L+ P+P QGA+ +E + Q ++ ++ T +V ERA LAEL+ C Sbjct: 188 VTEALDPVQMLPAPAQGALAVECRRGDADLQSVLSELDDHWTRAAVTAERALLAELEAGC 247 Query: 245 KSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 + + A L GI LA+DG + S G +A +G A+ Sbjct: 248 TAPVGAIAEVVESLDDDGRIFEELSLRGIALAADGSDSVKASAVGPVGEAGALGTALARE 307 Query: 296 IRFISNKNVF 305 + + +++ Sbjct: 308 LLDLGARDLL 317 >gi|237744690|ref|ZP_04575171.1| porphobilinogen deaminase [Fusobacterium sp. 7_1] gi|229431919|gb|EEO42131.1| porphobilinogen deaminase [Fusobacterium sp. 7_1] Length = 302 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 109/304 (35%), Positives = 148/304 (48%), Gaps = 7/304 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT--LTEIG 59 KK IG+R S LALA A + L P I + T GD+ +++ Sbjct: 1 MKKNIIIGSRGSILALAQANLIKDKLQ--INYPNLTFTIKEIVTSGDKDLKSNWENSDVS 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L Sbjct: 59 LKSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLV 117 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 118 TLPQGAKIGTSSLRRVMNLKAIRPDFEIKHLRGNIHTRLKKLEIEDYDAIVLAAAGLKRT 177 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I E L+ E FPP+P QG + I+ N+ + +E++K I++E+ V ER F Sbjct: 178 GMTDKITEYLSGEVFPPAPAQGVLYIQCRENDEEIKEILKSIHNENIAKIVEIEREFSKI 237 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DG C + + ++ G + F V + +GK + I AA+ I+ Sbjct: 238 FDGGCHTPMGCYSQVNGDKIKFTA-VYSDEGKQ-IRAVVEDDLTKGKEIAYMAAEEIKNK 295 Query: 300 SNKN 303 NK Sbjct: 296 INKG 299 >gi|119478980|ref|XP_001259519.1| hydroxymethylbilane synthase, putative [Neosartorya fischeri NRRL 181] gi|119407673|gb|EAW17622.1| hydroxymethylbilane synthase, putative [Neosartorya fischeri NRRL 181] Length = 341 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 96/319 (30%), Positives = 151/319 (47%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++ F IGTR S LAL ++L P + I T GD+ T L E K Sbjct: 15 SRRTFTIGTRKSKLALMQTDLVVAALKK--SWPEYTFQIHSQETAGDKNTVIALREFTTK 72 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 L+T+E+E+ L++G++D VHS KD+PT+L + + RED RDV + + Sbjct: 73 NLWTQELEELLMAGDVDLIVHSLKDVPTQLPPSCTLGPMMEREDTRDVLVMKKGLPNMAF 132 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176 ++ SV+GTSS+RR A L R + V D RG I TRL KL+ I+LA AG+ Sbjct: 133 SEMPAGSVVGTSSIRRTAQLARRYPHLKVQDVRGNIGTRLAKLDAEDSPFTCIILAAAGL 192 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 RL E I + L+ ++ + GQGA+ +E ++ ++++ I H +T + ER Sbjct: 193 LRLGLEDRISQYLDSKNGGMLYAVGQGALGVEIRKDDKLLRDMLSSIGHHETTMACLAER 252 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 + L L+G C + + L IV++ DG+ EV +G+ A Sbjct: 253 SLLRTLEGGCSAPLGVETEWVQDSDGSSKLRMRAIVVSVDGRESAEVEVDGSVDTSESAG 312 Query: 287 NIGRDAAQYIRFISNKNVF 305 G A+ + + Sbjct: 313 EFGVTVAKALVEKGAGEIL 331 >gi|21227846|ref|NP_633768.1| porphobilinogen deaminase [Methanosarcina mazei Go1] gi|23821683|sp|Q8PW57|HEM3_METMA RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|20906258|gb|AAM31440.1| Porphobilinogen deaminase [Methanosarcina mazei Go1] Length = 316 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 98/302 (32%), Positives = 149/302 (49%), Gaps = 9/302 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI-GGKGLF 64 IGTR S LALA L + I + T GDR T+R L + GG G F Sbjct: 1 MIIGTRGSQLALAQTENVARLLKEK----GVETSIKIIKTSGDRFTDRPLHAVSGGVGAF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 E++ +++GEID AVHS KDMPT K + A L R+ D+ +++ L +L Sbjct: 57 VRELDDVMLAGEIDIAVHSMKDMPTIRPKAIPTVAVLKRDTPFDILLTYDGTPLDELPEQ 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S+IGTSSLRR A + R+R DI + RG I+TRL KL + I+LA AG++R+ E Sbjct: 117 SIIGTSSLRRTAQIRRYRPDIITQNLRGNIDTRLRKLREGQYDGIMLAKAGLERMGWEIE 176 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 EI + + F PSP QG + + T +A+ V +++H ++ ER +AEL G C Sbjct: 177 G-EIFSPDFFCPSPNQGTVAVVTR-EGTEAEAAVSMLDHTESRIVTEIERILIAELGGGC 234 Query: 245 KSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 + + +A ++ VL+ DG+ + I R+ + + + Sbjct: 235 TTPVGSYAEITPDRQEIHVRAEVLSLDGREAIRIDEFIPLRGGIEKARELGHRLVEMGGR 294 Query: 303 NV 304 + Sbjct: 295 RL 296 >gi|320010120|gb|ADW04970.1| porphobilinogen deaminase [Streptomyces flavogriseus ATCC 33331] Length = 328 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 94/316 (29%), Positives = 159/316 (50%), Gaps = 17/316 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 P R+GTR S LA+A + ++ +V + ++ ++T GD I+ L +IGG Sbjct: 11 TTTPLRLGTRRSKLAMAQSGMVADAVREVT---GRAVELVEITTYGD-ISREHLAQIGGT 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F + + L+SGE+D AVHS KD+PT +GL ++A PRED RD ++ + L Sbjct: 67 GVFVAALREALLSGEVDFAVHSLKDLPTTQPEGLVLAAVPPREDPRDALVARDGLTFGQL 126 Query: 122 ALHSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 + IGT S RR A L + DI + RG ++TR+ + + + A++LA AG+ Sbjct: 127 PAGARIGTGSPRRMAQLNAYARSHGLDIETVAIRGNVDTRIGFVRSGELDAVVLAAAGLS 186 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL + + + L ++ P+PGQGA+ +E ++ + ++ T +V ERA L Sbjct: 187 RLGRTDEVTDFLPVDTVLPAPGQGALAVECAESSADLAAALAELDDPYTRIAVTAERALL 246 Query: 238 AELDGSCKSAIAGFAYC--KG---STLYFYGIVLASDGKIFHEVSRNGNR----CDAINI 288 L+ C + + A +G + L G+V ++DG ++S G DA + Sbjct: 247 NALEAGCSAPVGALADLLAEGQVVNELRLRGVVGSTDGTSLVQLSITGPVPTSHDDAAAL 306 Query: 289 GRDAAQYIRFISNKNV 304 GR+ A + + Sbjct: 307 GRELAAEMLAKGAAGL 322 >gi|229117967|ref|ZP_04247327.1| Porphobilinogen deaminase [Bacillus cereus Rock1-3] gi|228665416|gb|EEL20898.1| Porphobilinogen deaminase [Bacillus cereus Rock1-3] Length = 295 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 108/291 (37%), Positives = 155/291 (53%), Gaps = 6/291 (2%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + L + P+ + + TKGD I + TL+++GGKGLF +EIE L+ E Sbjct: 1 MTQTNWFIDQLKALGL--PYEFEVKEIVTKGDVILDVTLSKVGGKGLFVKEIEHALLMKE 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 ID AVHS KDMP L +GL I R D RD FIS + S KDLA +++GTSSLRR A Sbjct: 59 IDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASFKDLAEGAILGTSSLRRSA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV-IKEILNIEDFP 195 LL R D+ V RG I+TRL KL AI+LA AG++R+ + I E L+ Sbjct: 119 QLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDDEVITEHLDETLCV 178 Query: 196 PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC- 254 P+ GQGA+ IE ++ +L+ +N T +V ER FL +L+G C+ IAG+A Sbjct: 179 PAVGQGALAIECRKDDNDLLQLLSHMNDAVTERTVAAERVFLHKLEGGCQVPIAGYATLT 238 Query: 255 KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 K + +V + DG + + + G + +G +AA + K + Sbjct: 239 KDDAIELTALVGSMDGSVLLKETVVG--VEPKEVGLEAADLLIKQGAKELI 287 >gi|91084135|ref|XP_967479.1| PREDICTED: similar to porphobilinogen deaminase [Tribolium castaneum] gi|270006650|gb|EFA03098.1| hypothetical protein TcasGA2_TC013007 [Tribolium castaneum] Length = 460 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 108/293 (36%), Positives = 152/293 (51%), Gaps = 12/293 (4%) Query: 1 MEK-KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + + R+G+R S LAL S L +H P + I+ +ST GD++ + L +IG Sbjct: 1 MSEIEKIRVGSRKSELALIQTRHVISLLKKIH--PGKDFEIVTMSTLGDKVLDIPLPKIG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---SHTAQ 116 K LFT+E+E L +G +D VHS KD+PT L G+ I A L RED RD + H Sbjct: 59 EKSLFTKELEAALSTGCVDFVVHSLKDLPTVLPPGMAIGAVLTREDPRDALVLQKDHDKY 118 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAG 175 L+ L SVIGTSSLRR A L R + V RG + TRL KL+ K AI+LA AG Sbjct: 119 LLETLPEGSVIGTSSLRRGAQLARKYPHLKVESIRGNLNTRLKKLDELGKYQAIILASAG 178 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + R+ I +IL+ ++ + GQGA+ +E ++ K EL+K + T V ER+ Sbjct: 179 LIRMGWTSRISKILDSDELLYAVGQGALAVECRESDEKTIELLKPLYDVQTALRVISERS 238 Query: 236 FLAELDGSCKSAIAG---FAYCKGS--TLYFYGIVLASDGKIFHEVSRNGNRC 283 FL L G C + +A + K + TL G V + DGK + Sbjct: 239 FLKTLGGGCSAPVAVSSDLSRLKDNKHTLKLKGAVWSLDGKEEIIETGECEID 291 >gi|308063099|gb|ADO04986.1| porphobilinogen deaminase [Helicobacter pylori Sat464] Length = 306 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 100/302 (33%), Positives = 156/302 (51%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-V 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E N K ++ +N E++ + ERAF+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KNHKHFATLQKLNDEESAFCCHLERAFVKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A+++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKNKALDLVQELLEAFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|261839094|gb|ACX98859.1| porphobilinogen deaminase [Helicobacter pylori 52] Length = 306 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 98/302 (32%), Positives = 154/302 (50%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E + K ++ +N E + + ER F+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KSHKHFATLQKLNDEKSAFCCHLEREFVKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A+++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVITKEKQGDKTKALDLVQELLEAFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|170703456|ref|ZP_02894225.1| porphobilinogen deaminase [Burkholderia ambifaria IOP40-10] gi|170131633|gb|EDT00192.1| porphobilinogen deaminase [Burkholderia ambifaria IOP40-10] Length = 304 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 104/293 (35%), Positives = 162/293 (55%), Gaps = 5/293 (1%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E+E L G Sbjct: 1 MWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELENALADGR 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+GTSSLRR+A Sbjct: 59 ADLAVHSLKDVPMALPDGFALTAIMEREDPRDAFVSNDYASLDALPPGAVVGTSSLRREA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 +L + V+ RG ++TRL+KL+ AI+LA AG+KRL E I+ ++++ED PP Sbjct: 119 MLRARYPHLDVLPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLEARIRTLIDVEDSPP 178 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + GQGA+ IE + + ++ T +V ER L GSC+ +A A + Sbjct: 179 AAGQGALGIEIAAHRTDVAAWLAPLHDPRTALAVEAERMVSRALGGSCEVPLAAHAVWRA 238 Query: 257 STLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNKNVFN 306 LY G V +DG+ G DA+ +GR + + ++ N Sbjct: 239 GELYLTGRVSTTDGQRVLTAEECGAVMTVADALALGRAVSDELEAQGALDIVN 291 >gi|238578919|ref|XP_002388878.1| hypothetical protein MPER_12057 [Moniliophthora perniciosa FA553] gi|215450574|gb|EEB89808.1| hypothetical protein MPER_12057 [Moniliophthora perniciosa FA553] Length = 350 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 96/320 (30%), Positives = 148/320 (46%), Gaps = 17/320 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN----IVIIPLSTKGDRITNRTLTEIG 59 + F + +R S LA SL ++ ++T GD+ ++ L +G Sbjct: 9 RTFVLASRASQLAQIQTNMVLDSLKALYPDTTSESNPKFTTSFMTTAGDKNQSQALYLLG 68 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT----- 114 GK L+T+E+E L+ E+D VHS KD+PT L +G I L RED D + Sbjct: 69 GKALWTKELEVALLEREVDMLVHSLKDVPTVLPEGCMIGGILEREDPVDSLVVKRGYEDK 128 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLA 172 +SL DL SV+GTSS+RR A L R + D RG + TR+ KL+ + AI+LA Sbjct: 129 WKSLDDLPEGSVVGTSSVRRVAQLKRNYPGLKFQDVRGNLNTRMAKLDAPDGPYAAIILA 188 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 AG+ RL + L + QGA+ +E N+ +A EL K I H++T + Sbjct: 189 KAGMVRLGMGDRLTCDLAPPTLFHAVSQGALAVEIRNNDKEALELCKRITHQNTAWKCSA 248 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGST---LYFYGIVLASDGKIFHEVSRNGN---RCDAI 286 ERA L L+G C + ++ K L G V + DG E + +A Sbjct: 249 ERACLRVLEGGCSVPVGVSSFLKHDKELVLEISGCVTSLDGSTHVEHTLKEPVTSVEEAE 308 Query: 287 NIGRDAAQYIRFISNKNVFN 306 ++G A+ + + + + Sbjct: 309 DVGGRLARILIETGAREILD 328 >gi|315586235|gb|ADU40616.1| hydroxymethylbilane synthase [Helicobacter pylori 35A] Length = 306 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 100/302 (33%), Positives = 155/302 (51%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECF---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E N K ++ +N E++ + ER F+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KNHKHFATLQKLNDEESAFCCHLEREFIKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK R G++ A+++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKERQGDKTKALDLVQELLEAFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|126439305|ref|YP_001058121.1| porphobilinogen deaminase [Burkholderia pseudomallei 668] gi|166201498|sp|A3N700|HEM3_BURP6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|126218798|gb|ABN82304.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 668] Length = 329 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMVLPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYIRFISN 301 + +A A +G L+ G V +DG H +R DA+ +GR + + Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGA 310 Query: 302 KNVFN 306 + + + Sbjct: 311 RAIVD 315 >gi|260061130|ref|YP_003194210.1| porphobilinogen deaminase [Robiginitalea biformata HTCC2501] gi|88785262|gb|EAR16431.1| porphobilinogen deaminase [Robiginitalea biformata HTCC2501] Length = 315 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 96/317 (30%), Positives = 143/317 (45%), Gaps = 21/317 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RIGTR S LAL A R L H ++P+ + GD + ++ L E+G Sbjct: 1 MS-RALRIGTRDSELALWQAQTVRDRLEAA----GHRAELVPVKSTGDLVLDKPLYELGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ L+ +ID AVHS KD+PT L +G+ +A L R RDV + L Sbjct: 56 TGIFTKTLDVALLREDIDLAVHSMKDVPTALPEGICQAAVLERASARDVLVHKGLGFL-- 113 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 I T SLRRKA L V RG + TRL L N + A AG++R+ Sbjct: 114 -DGPGTIATGSLRRKAQWLNRYPAHQVTGLRGNVNTRLKLLRENSWDGAIFAQAGLERIG 172 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E ++ P+P QGA+ + ++ A+E + ++HE + V ER FL L Sbjct: 173 LLPDNAE--PLDWMLPAPAQGAMLVVARTSDTAAREAARPLHHEQSALEVAVEREFLRTL 230 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-NGNRC----------DAINIG 289 +G C + I + L+ G + + DGK V+R G+ DA G Sbjct: 231 EGGCSAPIGARVHAADGQLHLEGGLFSLDGKKAFRVTRHTGSLEAGGTGDARFQDAGEFG 290 Query: 290 RDAAQYIRFISNKNVFN 306 A+ I + Sbjct: 291 AACAREILDSGGAVLME 307 >gi|134281147|ref|ZP_01767856.1| porphobilinogen deaminase [Burkholderia pseudomallei 305] gi|134247453|gb|EBA47538.1| porphobilinogen deaminase [Burkholderia pseudomallei 305] Length = 329 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYIRFISN 301 + +A A +G L+ G V +DG H +R DA+ +GR + + Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGA 310 Query: 302 KNVFN 306 + + + Sbjct: 311 RAIVD 315 >gi|254388880|ref|ZP_05004112.1| porphobilinogen deaminase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|254393333|ref|ZP_05008481.1| porphobilinogen deaminase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294813175|ref|ZP_06771818.1| Porphobilinogen deaminase 1 [Streptomyces clavuligerus ATCC 27064] gi|326441528|ref|ZP_08216262.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064] gi|197702599|gb|EDY48411.1| porphobilinogen deaminase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|197706968|gb|EDY52780.1| porphobilinogen deaminase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294325774|gb|EFG07417.1| Porphobilinogen deaminase 1 [Streptomyces clavuligerus ATCC 27064] Length = 319 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 90/317 (28%), Positives = 155/317 (48%), Gaps = 17/317 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ R+GTR S LA+A + + + + P + ++ ++T GD + L +IGG Sbjct: 1 MTERALRLGTRRSMLAMAQSGQVAQEVRRLTGRP---VELVEITTYGDISREQ-LAQIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L+ GE+D AVHS KD+PT L ++A RED RDV ++ + Sbjct: 57 TGVFVAALREALLRGEVDFAVHSLKDLPTGQPDELALAAIPRREDPRDVLVARDGLTFDR 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + +GT S RR A L + + RG I+TR+ + + K A++LA AG+ Sbjct: 117 LPDGARVGTGSPRRMAQLNAYARAHGLRIETVPIRGNIDTRIGYVRSGKLDAVVLAAAGL 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ + + ++L+++ P+PGQGA+ IE + + ++ T +V ER+ Sbjct: 177 NRIGRADEVTDVLSVDSVLPAPGQGALAIECAAADADLAATLGALDDPHTRVAVTAERSL 236 Query: 237 LAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAIN 287 LA L+ C + + A G + G+V +DG ++S G DAI Sbjct: 237 LAALEAGCSAPVGALADLLGDEEVVTEMRLRGVVGTTDGSTLVQLSTTGPVPTSHGDAIA 296 Query: 288 IGRDAAQYIRFISNKNV 304 +GR+ A + + Sbjct: 297 LGRELASEMLAKGAAGL 313 >gi|227508197|ref|ZP_03938246.1| porphobilinogen deaminase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227192426|gb|EEI72493.1| porphobilinogen deaminase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 303 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 104/302 (34%), Positives = 148/302 (49%), Gaps = 6/302 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K F +GTR S LA+ +L + + P + ++T+GDR +L +IGGK Sbjct: 1 MKPEFVVGTRQSKLAMRQTNLVVDALKE--RFPKIIFKVEKITTQGDRNRKDSLRKIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F +EIE++L ID AVHS KD+ L K L I R+ D IS S D Sbjct: 59 GIFVKEIEQRLTDKRIDFAVHSLKDVMPSLPKNLIIGGVPKRDSPFDCLISTKPFSDIDQ 118 Query: 122 -ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + IGTSS RR+ R D+ ++ RG +++R+ KL + I+LA AG+ RL Sbjct: 119 LPKGARIGTSSSRRQGQFSHLRPDVEIVSIRGNVDSRIQKLQRDHLDGIILAEAGLNRLG 178 Query: 181 KEKVIKEILNIE-DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + L+++ D P+ GQGAI IE ++ L+K I DT SV ER FL Sbjct: 179 VDLTGLYRLSLKNDLLPAAGQGAIGIECRADDHDTLALLKQIEDADTRQSVTIERDFLRR 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L GSC I FA + F G+V + DGKIF S+ N+G + A + Sbjct: 239 LGGSCNFPIGAFASQTSMGVRFDGLVASIDGKIFFSKSKT--EQTGGNLGEEVADELISE 296 Query: 300 SN 301 Sbjct: 297 GA 298 >gi|53718657|ref|YP_107643.1| porphobilinogen deaminase [Burkholderia pseudomallei K96243] gi|53725180|ref|YP_102499.1| porphobilinogen deaminase [Burkholderia mallei ATCC 23344] gi|76808885|ref|YP_332640.1| porphobilinogen deaminase [Burkholderia pseudomallei 1710b] gi|121600693|ref|YP_993593.1| porphobilinogen deaminase [Burkholderia mallei SAVP1] gi|124386445|ref|YP_001028944.1| porphobilinogen deaminase [Burkholderia mallei NCTC 10229] gi|126449020|ref|YP_001081141.1| porphobilinogen deaminase [Burkholderia mallei NCTC 10247] gi|126455102|ref|YP_001065357.1| porphobilinogen deaminase [Burkholderia pseudomallei 1106a] gi|167003503|ref|ZP_02269289.1| hydroxymethylbilane synthase [Burkholderia mallei PRL-20] gi|167901767|ref|ZP_02488972.1| porphobilinogen deaminase [Burkholderia pseudomallei NCTC 13177] gi|217419743|ref|ZP_03451249.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 576] gi|226194325|ref|ZP_03789923.1| hydroxymethylbilane synthase [Burkholderia pseudomallei Pakistan 9] gi|237811340|ref|YP_002895791.1| hydroxymethylbilane synthase [Burkholderia pseudomallei MSHR346] gi|242316542|ref|ZP_04815558.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 1106b] gi|254178350|ref|ZP_04885005.1| porphobilinogen deaminase [Burkholderia mallei ATCC 10399] gi|254190785|ref|ZP_04897292.1| porphobilinogen deaminase [Burkholderia pseudomallei Pasteur 52237] gi|254199404|ref|ZP_04905770.1| porphobilinogen deaminase [Burkholderia mallei FMH] gi|254205719|ref|ZP_04912071.1| porphobilinogen deaminase [Burkholderia mallei JHU] gi|254260166|ref|ZP_04951220.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 1710a] gi|254298288|ref|ZP_04965740.1| porphobilinogen deaminase [Burkholderia pseudomallei 406e] gi|254357877|ref|ZP_04974150.1| porphobilinogen deaminase [Burkholderia mallei 2002721280] gi|61213345|sp|Q62LC0|HEM3_BURMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|61213357|sp|Q63W73|HEM3_BURPS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|123599913|sp|Q3JUW3|HEM3_BURP1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|158513523|sp|A3NSN6|HEM3_BURP0 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166201495|sp|A3MLK5|HEM3_BURM7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166201496|sp|A2SAH5|HEM3_BURM9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166201497|sp|A1V5U0|HEM3_BURMS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|52209071|emb|CAH35011.1| putative porphobilinogen deaminase protein [Burkholderia pseudomallei K96243] gi|52428603|gb|AAU49196.1| porphobilinogen deaminase [Burkholderia mallei ATCC 23344] gi|76578338|gb|ABA47813.1| porphobilinogen deaminase [Burkholderia pseudomallei 1710b] gi|121229503|gb|ABM52021.1| porphobilinogen deaminase [Burkholderia mallei SAVP1] gi|124294465|gb|ABN03734.1| hydroxymethylbilane synthase [Burkholderia mallei NCTC 10229] gi|126228744|gb|ABN92284.1| porphobilinogen deaminase [Burkholderia pseudomallei 1106a] gi|126241890|gb|ABO04983.1| hydroxymethylbilane synthase [Burkholderia mallei NCTC 10247] gi|147749000|gb|EDK56074.1| porphobilinogen deaminase [Burkholderia mallei FMH] gi|147753162|gb|EDK60227.1| porphobilinogen deaminase [Burkholderia mallei JHU] gi|148027004|gb|EDK85025.1| porphobilinogen deaminase [Burkholderia mallei 2002721280] gi|157808153|gb|EDO85323.1| porphobilinogen deaminase [Burkholderia pseudomallei 406e] gi|157938460|gb|EDO94130.1| porphobilinogen deaminase [Burkholderia pseudomallei Pasteur 52237] gi|160699389|gb|EDP89359.1| porphobilinogen deaminase [Burkholderia mallei ATCC 10399] gi|217397047|gb|EEC37063.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 576] gi|225933410|gb|EEH29399.1| hydroxymethylbilane synthase [Burkholderia pseudomallei Pakistan 9] gi|237505195|gb|ACQ97513.1| hydroxymethylbilane synthase [Burkholderia pseudomallei MSHR346] gi|242139781|gb|EES26183.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 1106b] gi|243060977|gb|EES43163.1| hydroxymethylbilane synthase [Burkholderia mallei PRL-20] gi|254218855|gb|EET08239.1| hydroxymethylbilane synthase [Burkholderia pseudomallei 1710a] Length = 329 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYIRFISN 301 + +A A +G L+ G V +DG H +R DA+ +GR + + Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGA 310 Query: 302 KNVFN 306 + + + Sbjct: 311 RAIVD 315 >gi|309810452|ref|ZP_07704278.1| hydroxymethylbilane synthase [Dermacoccus sp. Ellin185] gi|308435584|gb|EFP59390.1| hydroxymethylbilane synthase [Dermacoccus sp. Ellin185] Length = 327 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 86/303 (28%), Positives = 141/303 (46%), Gaps = 10/303 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+ + L H + I+ ++T+GD +L ++GG G+F Sbjct: 10 PIRLGTRRSHLAMTQSTWVAEQLRAH----GHAVEIVEITTEGDVNR-ASLAQMGGTGVF 64 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 I + L+ E+D AVHS KD+P GL I+ RED RD ++ +L +L Sbjct: 65 AAAIRRALLEDEVDMAVHSLKDLPVAPEPGLVIAGIPVREDPRDALVARDGLTLGELPAG 124 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GT S RR A L + D RG I+TR+ + + + ++LA AG+ R+++ Sbjct: 125 AVVGTGSPRRAAQLQALGLGFEIRDIRGNIDTRMGYVTSGELDGVILARAGLARVERTGA 184 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E ++ P+PGQGA+ +E + + + ++ DT +V ERA L L+ C Sbjct: 185 ISETIDPLQMLPAPGQGALGLECREGDARVIAALAELDDADTRAAVTAERAVLGALEAGC 244 Query: 245 KSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + + A + V A DG S G+ + +G A+ + Sbjct: 245 AAPVGALAEIVEEPDGSLEISLRAFVGAPDGSFELRRSDVGSYDNPAAVGEALARTLLDD 304 Query: 300 SNK 302 Sbjct: 305 GAG 307 >gi|325967722|ref|YP_004243914.1| porphobilinogen deaminase [Vulcanisaeta moutnovskia 768-28] gi|323706925|gb|ADY00412.1| porphobilinogen deaminase [Vulcanisaeta moutnovskia 768-28] Length = 305 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 91/301 (30%), Positives = 143/301 (47%), Gaps = 8/301 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR S L+L + L V P +I + T GD + ++ L IG KG+F Sbjct: 2 KIRIATRGSRLSLIQSDIVMRMLRRVE--PNIQFEVIIIRTTGDLVQDKPLYAIGTKGIF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL--KDLA 122 +E+ L+ E D AVHS KD+P+++ GL I+ + PR+ DV + L Sbjct: 60 EKEVNLALLKDEADIAVHSLKDLPSEISPGLVIAGFSPRDPPFDVLVVRNDYPSDLMALP 119 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSS+RR+A LL R DIS+ RG ++TR+NKL A+++A AG+ RL + Sbjct: 120 SGAKVGTSSVRRRAFLLSVRKDISINVIRGNVDTRINKLIRGDYDAVVIAEAGLVRLIND 179 Query: 183 KVIKE----ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + ++ PP+PGQG I + T + +L++ + ERAFL Sbjct: 180 MKSLHIRYARIPLDLLPPAPGQGIIAVVTREKDTNLIDLLRKASDPKAMVEALAERAFLR 239 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 + G C + G A G+ + F + +G V + D +G +AA + Sbjct: 240 TVGGGCHVPVGGIAIYDGNYMEFIAGIADINGNRKVIVKIRDSSIDPERLGINAAHELLR 299 Query: 299 I 299 Sbjct: 300 Q 300 >gi|319953182|ref|YP_004164449.1| porphobilinogen deaminase [Cellulophaga algicola DSM 14237] gi|319421842|gb|ADV48951.1| porphobilinogen deaminase [Cellulophaga algicola DSM 14237] Length = 524 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 93/302 (30%), Positives = 149/302 (49%), Gaps = 8/302 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A + L + + V++P+ + GD + ++ L E+G Sbjct: 1 MS-KIIRIGTRDSELALWQARTVQKQLKEQ----GYQSVLVPVKSMGDLVLDKPLHELGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ ++ GEID AVHS KD+PT L KG+ +A L R + D+ + Sbjct: 56 TGVFTKTLDIAMLKGEIDIAVHSMKDVPTVLPKGIVQAAVLKRGNYMDILAFKHNEEFLS 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 +VI T SLRRKA L V+D RG ++TR +KL +N + + A AG++R+ Sbjct: 116 QK-EAVIATGSLRRKAQWLNRYPTHEVVDLRGNVQTRADKLEDNDWNGAIFAAAGLERVG 174 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E + + P+P QGA+ + ++ ++ +NH++T ER FL L Sbjct: 175 LEFENT--IGLTWMVPAPAQGAVVVVALEDDEFSKTACAELNHKETEICTTLERKFLNLL 232 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C + I A K + + G++L+ DGK EV N+ + + Sbjct: 233 EGGCTAPIGALAIIKDTNVSLKGVLLSVDGKKRIEVEFTSKLGKHENLAEACVERVFSRG 292 Query: 301 NK 302 K Sbjct: 293 GK 294 >gi|302535112|ref|ZP_07287454.1| porphobilinogen deaminase [Streptomyces sp. C] gi|302444007|gb|EFL15823.1| porphobilinogen deaminase [Streptomyces sp. C] Length = 322 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 86/320 (26%), Positives = 157/320 (49%), Gaps = 20/320 (6%) Query: 1 MEKKP---FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57 M +P R+GTR S LA++ + ++ + P + ++ ++T GD ++ L + Sbjct: 1 MNTRPDQPLRLGTRRSKLAMSQSGHVAEAVRAITGRP---VELVEITTYGD-VSRENLAQ 56 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 IGG G+F + L+ GE+D AVHS KD+PT L I+A RED RD ++ + Sbjct: 57 IGGTGVFVTALRDALVRGEVDFAVHSLKDLPTAQPDELVIAAMPKREDPRDALVARDGLT 116 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSD----ISVIDFRGKIETRLNKLNNNKAHAILLAY 173 + L + +GT S RR A L + + + RG ++TR+ + + + A++LA Sbjct: 117 FEQLPDGARVGTGSPRRMAQLNAYARSLGKSVETVAIRGNVDTRIGFVRSGELDAVVLAA 176 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG+ R+ + ++L++++ P+PGQGA+ +E ++ + ++ T +V E Sbjct: 177 AGLNRIGRADEATDLLSVDNVLPAPGQGALAVECLASDADLISALGRLDDPHTRAAVTAE 236 Query: 234 RAFLAELDGSCKSAIAGFAYC--KG---STLYFYGIVLASDGKIFHEVSRNGNR----CD 284 RA LA L+ C + + A G + + G+V DG ++S G + Sbjct: 237 RALLAALEAGCSAPVGALADLLADGQIVNEMRLRGVVGTLDGSTLVQLSTTGPVPQSYDE 296 Query: 285 AINIGRDAAQYIRFISNKNV 304 A+ +GR+ A + + Sbjct: 297 AMALGRELADEMLAKGAAGL 316 >gi|149194367|ref|ZP_01871464.1| Porphobilinogen deaminase [Caminibacter mediatlanticus TB-2] gi|149135542|gb|EDM24021.1| Porphobilinogen deaminase [Caminibacter mediatlanticus TB-2] Length = 295 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 105/298 (35%), Positives = 160/298 (53%), Gaps = 10/298 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LAL A + L ++ H + + ++T GD+I ++ L IGGKGLF Sbjct: 2 KLTIATRGSKLALWQAEWVKKRLENL----GHEVDLKIVTTTGDKILDKPLASIGGKGLF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLL-KGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 +E+E+ L+ GE AVHS KD PT+ + ++A RE + DVF+S T ++L +L Sbjct: 58 IKEVEEALLRGEAQIAVHSLKDFPTEYNKEHFTLAAVPKREAVEDVFLSETFETLAELPH 117 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK--K 181 ++V+GTSS+RR L +R D+ + D RG ++TR+NKL + AI+LAYAG+KRL K Sbjct: 118 NAVVGTSSIRRAMQLKAFREDLVISDLRGNVDTRINKLKKGEYDAIILAYAGVKRLNLIK 177 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E EIL+ + P+ GQGA+ IET + K E VK +N T V ER F+ EL+ Sbjct: 178 EVKYFEILDTDIMIPAMGQGALGIETI-KDEKVIEAVKPLNDLWTKIEVTIERDFIDELN 236 Query: 242 GSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C + + A ++ +L + + + N GR+ A+ + Sbjct: 237 LGCHAPVGVNAKIMVDDSIKIKAAILDKN-NKVIKKEMVVPFDEWENAGREFAEEFKE 293 >gi|332673079|gb|AEE69896.1| hydroxymethylbilane synthase [Helicobacter pylori 83] Length = 306 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 97/302 (32%), Positives = 154/302 (50%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECS---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-V 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA G+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEVGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E + K ++ +N E++ + ER F+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KSHKHFATLQKLNDEESAFCCHLEREFVKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A+++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIRAVLGLPNGKEVIAKEKQGDKTKALDLVQELLEAFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|269128634|ref|YP_003302004.1| porphobilinogen deaminase [Thermomonospora curvata DSM 43183] gi|268313592|gb|ACY99966.1| porphobilinogen deaminase [Thermomonospora curvata DSM 43183] Length = 311 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 96/305 (31%), Positives = 156/305 (51%), Gaps = 12/305 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S +A + L + H + ++ ++T+GD I+ L ++GG G+F Sbjct: 4 LRLGTRKSLMATTQSRRVGDELTRLT---GHAVELVGVTTEGD-ISRAHLAQMGGTGVFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + KLISGE+D AVHS KD+PT +G+ ++A R+D RD L DL + Sbjct: 60 SALRDKLISGEVDFAVHSLKDLPTAPAEGITLAAVYRRDDPRDALCGPLK--LADLPRGA 117 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT S RR A L R D+ ++ RG +TRL K+ + + A++LAYAG+ R+ + + Sbjct: 118 RVGTGSPRRVAQLRALRGDLEIVPIRGNADTRLRKVADGELDAVVLAYAGLGRIGRRDAV 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+ + D P+PGQGA+ +E + EL+ ++H T +V ER LA L+ C Sbjct: 178 VEVFDPADMLPAPGQGALALECRSDRLDLIELLATVDHAPTRAAVTAERTVLAVLEAGCS 237 Query: 246 SAIAGFAYCKGS------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + + +A + S +L+ V DG +S +G+ A IGR+ A + Sbjct: 238 APVGAYATVEDSAEEEQPSLHLSACVAGIDGARQVRLSGSGHPERAEEIGRELAAQLLAQ 297 Query: 300 SNKNV 304 + Sbjct: 298 GADQL 302 >gi|297379462|gb|ADI34349.1| porphobilinogen deaminase [Helicobacter pylori v225d] Length = 306 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 100/303 (33%), Positives = 155/303 (51%), Gaps = 5/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IG+R S LAL A + L I + TKGD+I + L +IGGKGLF Sbjct: 3 KLVIGSRGSELALWQANHIKERLKKECS---IESEIQIVKTKGDKILDTPLNKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L Sbjct: 60 TKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-K 183 + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 120 AKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGA 179 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 ++ ++E+ PS GQGA+ +E N K ++ +N E++ + ERAF+ L+G Sbjct: 180 KYRKAFSVEEMIPSMGQGALGVEML-KNHKHFATLQKLNDEESAFCCHLERAFVKGLNGG 238 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I A G + ++ +GK + G++ A ++ ++ + K Sbjct: 239 CQIPIGVHASLMGDRVKIQAVLGLPNGKEAIAKEKQGDKTKAFDLVQELLEAFLQSGAKE 298 Query: 304 VFN 306 + Sbjct: 299 ILE 301 >gi|307266129|ref|ZP_07547673.1| porphobilinogen deaminase [Thermoanaerobacter wiegelii Rt8.B1] gi|306918819|gb|EFN49049.1| porphobilinogen deaminase [Thermoanaerobacter wiegelii Rt8.B1] Length = 299 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 89/305 (29%), Positives = 140/305 (45%), Gaps = 12/305 (3%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK ++G+R S LAL + + + I+ ++T+GD + ++ ++EIGGK Sbjct: 1 MKKVIKVGSRSSELALVQTQMVINEIKKFRQ--DFEFEIVKITTQGDALIDKPISEIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F +EIE L+ GEID AVHS KDMP ++ + L++ A L RED +DVF+S DL Sbjct: 59 GVFVKEIESALLKGEIDMAVHSMKDMPYEIPEKLKLMAVLKREDPKDVFVSRNGTKFIDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSSLRR+ L R DI ++ RG + TRL K+ I+L+ AG+ RL Sbjct: 119 KKGAKIGTSSLRRQVQLKALRPDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN-HEDTWDSVNCERAFLAEL 240 E +I E + P+P QG + +E + + T+ + ER L Sbjct: 179 ESIITEYFPPDVVVPAPCQGILAVEIAESFDNIFQEFYPYIVDRRTFFEASVERELLKVF 238 Query: 241 DGSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +C+ +A G + D + G + + I Sbjct: 239 GVNCRQPFGAYAQYGRENDGEKIDIKVAYQKED--KLLKSEMTGLIVETDKMIEKL---I 293 Query: 297 RFISN 301 + Sbjct: 294 KEFGG 298 >gi|302205429|gb|ADL09771.1| Porphobilinogen deaminase [Corynebacterium pseudotuberculosis C231] gi|308275667|gb|ADO25566.1| Porphobilinogen deaminase [Corynebacterium pseudotuberculosis I19] Length = 296 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 85/301 (28%), Positives = 140/301 (46%), Gaps = 7/301 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 F IGTR S LA + R +L+ ++ + ++T GD + IG G+F Sbjct: 2 TFTIGTRGSLLATTQSGHVRDALISQ----GYSAELSIVTTPGDVNM-APVERIG-VGVF 55 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+ + L+ G D AVHS KD+PT+ + R D RD ++ +L +L Sbjct: 56 TQALRDVLVKGGCDIAVHSFKDLPTQRDPRFHLI-VPERADARDCLVARDGLTLAELPQG 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGT + RR + + R D+ + RG I+TR+ K+ + + A++LAYAG+ R+ + Sbjct: 115 ARIGTGAPRRISQIKALRPDVECVPLRGNIDTRMGKVFSGELDAVVLAYAGLSRVGRGDE 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E+ N E F P+P QGA+ IE V++ A + I + + ER L L+ C Sbjct: 175 ATEVFNPERFLPAPAQGALAIECRVDDAAAVAAINAIRNAEDETCALAERVVLNRLEAGC 234 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A + L G V++ DG + G +A+ IG A + + Sbjct: 235 TAPVAAHSVIIEQELQVTGAVISLDGSKVFRATMTGGLSEAVAIGEKVAAKLIQDGAAEL 294 Query: 305 F 305 Sbjct: 295 L 295 >gi|115387533|ref|XP_001211272.1| porphobilinogen deaminase [Aspergillus terreus NIH2624] gi|114195356|gb|EAU37056.1| porphobilinogen deaminase [Aspergillus terreus NIH2624] Length = 342 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 105/319 (32%), Positives = 155/319 (48%), Gaps = 17/319 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K F IGTR S LAL +++L P ++ I T GD+ T L + K Sbjct: 17 KTTFTIGTRKSKLALLQTDLVQAALQKA--WPQYSFRIHSRETAGDQNTTIALRDFTTKN 74 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119 L+T+E+E LI+G++D VHS KD+PT L + L RED RDV + +SL Sbjct: 75 LWTQELEDLLIAGDVDLIVHSLKDVPTLLPPSCTLGPMLKREDTRDVLVVKKGLSYKSLD 134 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177 DL SV+GTSS+RR A L R + +ID RG I TRL KL+ + I+LA AG+ Sbjct: 135 DLPAGSVVGTSSIRRTAQLARRYPHLKIIDVRGNIGTRLAKLDAEDGPFTCIILAAAGLL 194 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 RL + I + L+ ++ + GQGA+ IE ++P E++K I ++T + ER+ Sbjct: 195 RLGLQDRITQYLDSKNGGMLYAVGQGALGIEIRKDDPLMHEMLKNIGDDETTFASLAERS 254 Query: 236 FLAELDGSCKSAIAGFAYC-----KGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAIN 287 L L+G C + + + L IV++ DGK EV +G+ A Sbjct: 255 LLRTLEGGCSAPLGVESEWIPSSGSSRKLRMRSIVVSVDGKESAEVEVDGDVDSVDSAEA 314 Query: 288 IGRDAAQYIRFISNKNVFN 306 G A + + Sbjct: 315 FGIKVANALVEKGAGKILE 333 >gi|225630165|ref|YP_002726956.1| porphobilinogen deaminase [Wolbachia sp. wRi] gi|254800263|sp|C0R2M3|HEM3_WOLWR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|225592146|gb|ACN95165.1| porphobilinogen deaminase [Wolbachia sp. wRi] Length = 292 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 112/295 (37%), Positives = 162/295 (54%), Gaps = 8/295 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LA+ A E + L+D P +I I+ + T GD+ N L EIGGKGLF Sbjct: 3 VKIGTRGSKLAVVQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFI 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE +L+ ID AVHS KD+P GL I L R D FISH SL+ L + Sbjct: 61 KEIEAELLENNIDMAVHSLKDVPAFFSWGLTIPCVLERLSPCDAFISHKHNSLESLPQQA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 I TS++RRK LL +R D++++ RG + TR L N I+LA AG+ RL+K +I Sbjct: 121 TIATSAIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLI 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L + + GQGAICI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC Sbjct: 178 TEVLPPKVMLSAVGQGAICIQCRRNDVKIIDLLEKINNNMSFIGVKSERSFMKTVNGSCF 237 Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + +A A + LY ++ DGK + R DA +G DA ++ Sbjct: 238 TPLAALAEYVSENMLYLRCMLA--DGKNIYFTERTSFIEDAEKMGMDAGLELKSK 290 >gi|317177053|dbj|BAJ54842.1| porphobilinogen deaminase [Helicobacter pylori F16] Length = 306 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 99/302 (32%), Positives = 155/302 (51%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECS---MESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSMKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E N K ++ +N E++ + ER F+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KNHKHFATLQKLNDEESAFCCHLEREFVKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A+++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKALDLVQELLEAFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|332798468|ref|YP_004459967.1| Porphobilinogen deaminase [Tepidanaerobacter sp. Re1] gi|332696203|gb|AEE90660.1| Porphobilinogen deaminase [Tepidanaerobacter sp. Re1] Length = 293 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 110/301 (36%), Positives = 160/301 (53%), Gaps = 9/301 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK ++G+R S LAL S L + P + +I + T GD+ N + E+G K Sbjct: 1 MKKIVKVGSRQSQLALVQTELVISQLKE--HFPQWDFKLITVKTTGDKFLNSNMYELG-K 57 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G F +EIE+ L+SG ID AVHS KD+P +L +GL ISA RED RDVFIS + +L Sbjct: 58 GAFVKEIEEALLSGAIDMAVHSLKDVPHELPEGLAISAITRREDPRDVFISADDRRFSEL 117 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSS+RR L + R DI + RG I TR+ K+ I+LA AG+KRL Sbjct: 118 DTGAKIGTSSMRRMCELNKLRQDIECVPIRGNINTRIKKIKTCGLDGIVLAAAGVKRLGM 177 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E +I + + ++ P+ GQGA+ +ET + + VK IN ++T + ERAF+ + Sbjct: 178 ENLITDYFSPDEIVPAVGQGALAVETR-ADDEMSLFVKYINDDETTCATGAERAFMKVVG 236 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 GSCK + +A L G++ DG + G + +A IG A+ + Sbjct: 237 GSCKQPMGAYAEIFDDALKLIGMIER-DG-VVKWGKLEGRKSEAEQIGIRLAEEL---GG 291 Query: 302 K 302 K Sbjct: 292 K 292 >gi|262341328|ref|YP_003284183.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272665|gb|ACY40573.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 309 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 101/308 (32%), Positives = 147/308 (47%), Gaps = 9/308 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK RIGTR SPLA+ A + + L + + ++GD I N + + Sbjct: 1 MKKIIRIGTRNSPLAVFQAQKVQKLLKKEGYFSH----LFKIKSEGDLIQNVPIHALKHV 56 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL-KD 120 G+FT+++ ++SGEID AVHS KD+P L +G+ +SA+L RE D + + D Sbjct: 57 GVFTKKLTNIMLSGEIDMAVHSLKDVPINLPEGIILSAFLKRESFFDSLVYKGSSDFLYD 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 +H+VI T S+RR A +ID RG I TRL KL N+ L A G++RL Sbjct: 117 PKIHAVIATGSIRRSAFWKNRYPHHGLIDLRGNINTRLKKLQNSSWKGALFAQVGLERLG 176 Query: 181 --KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 ++ PSPGQG I + T L+K ++ +T S N ER FL Sbjct: 177 ILNNFKCLNCKILDWMIPSPGQGIIVVSTLEKKDSINSLIKKLDDIETRLSANIERQFLK 236 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L G C S I A K +YF G++L+ DG + +R G + IG A+ I Sbjct: 237 TLGGGCISPIGAHAKIKNKIIYFTGMLLSLDGMHKIKKTRIGT--NYDLIGFQCAEEILK 294 Query: 299 ISNKNVFN 306 + + Sbjct: 295 EGGREILE 302 >gi|225010397|ref|ZP_03700869.1| porphobilinogen deaminase [Flavobacteria bacterium MS024-3C] gi|225005876|gb|EEG43826.1| porphobilinogen deaminase [Flavobacteria bacterium MS024-3C] Length = 303 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 100/301 (33%), Positives = 146/301 (48%), Gaps = 9/301 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 K RIGTR S LA+ A +S L ++P+ + GD ++ L E+G G+ Sbjct: 3 KTLRIGTRDSALAMWQAKTVQSQLAAH----GIASELVPVKSLGDLKLDQPLYELGVTGV 58 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ ++ L++GEID AVHS KD+PT L KGL +A L R DV + + Sbjct: 59 FTKTLDLALLAGEIDLAVHSYKDVPTVLAKGLSTAAVLKRASTADVLVHKSPDFT---TS 115 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 I TSSLRRKA L + ++D RG ++TRL KL NN + A AG+ RL + Sbjct: 116 GLQIATSSLRRKAQWLAKYPEHQLVDIRGNVQTRLEKLANNSWGGAIFAAAGLARL--DL 173 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + + + ++ P+P QGA+ + + E + V+N T ER FL EL+G Sbjct: 174 LPENAMRLDWMVPAPAQGAMVVVAQSAHTVLLEELSVLNDSQTALCTQIEREFLNELEGG 233 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C + I L+F G++ + DGK E + A GR AQ I K Sbjct: 234 CTAPIGALCTTTQDQLHFIGVLHSLDGKQHIETNTFVPLDQAPGYGRKMAQKILSQGGKA 293 Query: 304 V 304 + Sbjct: 294 L 294 >gi|121605981|ref|YP_983310.1| porphobilinogen deaminase [Polaromonas naphthalenivorans CJ2] gi|120594950|gb|ABM38389.1| porphobilinogen deaminase [Polaromonas naphthalenivorans CJ2] Length = 331 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 99/313 (31%), Positives = 149/313 (47%), Gaps = 19/313 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LA+ A ++ L + ++ ++T GD+I +R+L+++GGKGLF Sbjct: 13 KVVIATRESRLAMWQAEHVKALLESRLGW---QVELLGMTTLGDQILDRSLSKVGGKGLF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++ L RED D F+S+ SL +L Sbjct: 70 VKELEVALSEGRADLAVHSLKDVPMDLPEGFALACVLEREDPHDAFVSNDFASLAELPPG 129 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR LL R D+++ RG ++TRL KL+ + AI+LA AG+KRL E Sbjct: 130 AVVGTSSLRRLVLLKALRPDLAIQPLRGNLDTRLRKLDEGQYQAIVLAAAGLKRLGLESR 189 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ D P+ GQGA+ IE + + + H+ TW +V ER + GSC Sbjct: 190 IRHTFAPTDMLPAAGQGALGIEVRADRADLIAALATLAHQPTWLAVTAERTVSRAMGGSC 249 Query: 245 KSAIAGFAYC-KGSTLYFYGIVLAS---DGK------------IFHEVSRNGNRCDAINI 288 +A F L D + + + +A + Sbjct: 250 SMPLAAFVTAGSDGALQLDAAWGDPATADASSGVSAVLPAPLVQVRQTAVVRSFAEAEAL 309 Query: 289 GRDAAQYIRFISN 301 G A +R Sbjct: 310 GDAVAAQLRAGGA 322 >gi|21221749|ref|NP_627528.1| porphobilinogen deaminase [Streptomyces coelicolor A3(2)] gi|289770973|ref|ZP_06530351.1| porphobilinogen deaminase [Streptomyces lividans TK24] gi|11386858|sp|Q9WX16|HEM31_STRCO RecName: Full=Porphobilinogen deaminase 1; Short=PBG 1; AltName: Full=Hydroxymethylbilane synthase 1; Short=HMBS 1; AltName: Full=Pre-uroporphyrinogen synthase 1 gi|5123663|emb|CAB45352.1| putative porphobilinogen deaminase [Streptomyces coelicolor A3(2)] gi|289701172|gb|EFD68601.1| porphobilinogen deaminase [Streptomyces lividans TK24] Length = 319 Score = 209 bits (531), Expect = 5e-52, Method: Composition-based stats. Identities = 89/317 (28%), Positives = 156/317 (49%), Gaps = 17/317 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K R+GTR S LA+A + + ++ V P + ++ ++T GD L +IGG Sbjct: 1 MTEKALRLGTRRSKLAMAQSGQVADAVSQVTGRP---VELVEITTYGDTSR-EHLAQIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + L+ GE+D AVHS KD+PT +GL ++A RED RDV ++ A+ L D Sbjct: 57 TGVFVAALRDALLRGEVDFAVHSLKDLPTAQHEGLVVAAIPEREDPRDVVVARDARKLTD 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVI----DFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + +GT + RR A L + + RG ++TR+ + + + A++LA AG+ Sbjct: 117 LPRGARVGTGAPRRMAQLNAYARTHGMEIETVPIRGNVDTRIGYVRSGELDAVVLAAAGL 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ + + + L+++ P+PGQGA+ +E +N + ++ T +V ER+ Sbjct: 177 NRVGRIDEVTDFLSVDTVLPAPGQGALAVECAADNASLIAALAELDDPFTRAAVTAERSL 236 Query: 237 LAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAIN 287 LA L+ C + + A + G+V +DG ++S G A+ Sbjct: 237 LAALEAGCSAPVGALADLLADGQTVKEMRLRGVVGTTDGSTLVQLSTTGPVPETHEAALA 296 Query: 288 IGRDAAQYIRFISNKNV 304 +G + A + + Sbjct: 297 LGGELAAEMLAQGAAGL 313 >gi|302410259|ref|XP_003002963.1| porphobilinogen deaminase [Verticillium albo-atrum VaMs.102] gi|261357987|gb|EEY20415.1| porphobilinogen deaminase [Verticillium albo-atrum VaMs.102] Length = 353 Score = 209 bits (531), Expect = 5e-52, Method: Composition-based stats. Identities = 102/316 (32%), Positives = 147/316 (46%), Gaps = 16/316 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA+ +L + P + I + T GD+ L GGKGL+ Sbjct: 20 TVRIGTRRSALAVRQTELVIEALKRIR--PDYTYEIHAMQTLGDKDQVTALYNFGGKGLW 77 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH-----TAQSLK 119 T E+E KL + EID VHS KDMPT L +G + A + RE+ DV + +S+ Sbjct: 78 TNELEAKLTNNEIDVIVHSLKDMPTVLPEGCILGAVVERENPHDVVVFKDTVADQYKSIA 137 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIK 177 DL SV+GTSS+RR A L R + D RG I+TRL KL+N AI+LA AG+ Sbjct: 138 DLPAGSVVGTSSIRRIAQLKRKYPGLQFADVRGNIQTRLAKLDNPDGPFTAIILAAAGLL 197 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R+ I + L + + GQGA+ IE ++ + L++ I H T + ER+ Sbjct: 198 RMDLGGRIGQYLASDTGGILHAVGQGALGIEARTDDDRVLTLLRGIEHGPTRLAAEAERS 257 Query: 236 FLAELDGSCKSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGR 290 + L+G C I + TL V DG + + A +GR Sbjct: 258 VMRTLEGGCSVPIGVETTWRDDGKTLTLKASVTHVDGTHGVDGESTRVIESPEAADQLGR 317 Query: 291 DAAQYIRFISNKNVFN 306 D A + + + + Sbjct: 318 DLAAELVGRGAQTILD 333 >gi|312137417|ref|YP_004004754.1| hydroxymethylbilane synthase [Methanothermus fervidus DSM 2088] gi|311225136|gb|ADP77992.1| hydroxymethylbilane synthase [Methanothermus fervidus DSM 2088] Length = 289 Score = 209 bits (531), Expect = 5e-52, Method: Composition-based stats. Identities = 104/291 (35%), Positives = 162/291 (55%), Gaps = 6/291 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR SPLAL + + L + + I + T GD+I + L +IG +G+FT Sbjct: 1 MIVGTRGSPLALKQTYYVVNQLSKLVN---EEVKIKIIKTTGDKIKDSQLHKIGQRGVFT 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EI+K +++ E+D AVHS KD+PT+L + L+I A R+ +V +S S +L+ Sbjct: 58 KEIDKAVLNEEVDLAVHSLKDVPTELHEDLEIVAIPHRDSPNEVLVSKY--SWDELSEEC 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRRKA + RG IETR+ K+ + + A ++A A +KRL EK I Sbjct: 116 ILGTSSLRRKAFCRYHGKKFKIKPLRGNIETRIKKVEDGEYDATIMAEAALKRLNLEKYI 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 K+ +++ F PS GQGAI IET ++ K ++K +N + V ER L EL C+ Sbjct: 176 KKRFSVKYFTPSAGQGAIAIETR-SDSKYISVLKKLNDHRAFYEVTAERTVLKELGVGCQ 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 I A KG L Y I+L+ GK+ ++ +G +A +G+ AA+ + Sbjct: 235 WPIGVVARSKGKNLNLYAILLSKKGKLLSKIELDGKLHEATKLGKKAAKKM 285 >gi|51244454|ref|YP_064338.1| porphobilinogen deaminase [Desulfotalea psychrophila LSv54] gi|50875491|emb|CAG35331.1| probable porphobilinogen deaminase [Desulfotalea psychrophila LSv54] Length = 313 Score = 209 bits (531), Expect = 5e-52, Method: Composition-based stats. Identities = 97/307 (31%), Positives = 156/307 (50%), Gaps = 7/307 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K IG+R S LA+ L I + TKGD+I +R++ +IG K Sbjct: 1 MKNIINIGSRKSKLAMWQTNTIAGQLEAA----GMETRINSMETKGDKILDRSIVKIGSK 56 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL-KD 120 G+FTEE+E +L +G D AVHSAKDM ++L + ++ A+ RE + DV +S + D Sbjct: 57 GVFTEELEVQLATGITDIAVHSAKDMQSQLPEDFELIAFSQREKVNDVLVSDDKEIDLAD 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 IGTSS+RR+A+L ++ + ++ RG ++TR+ K+ N A++LAYAG+KR++ Sbjct: 117 PTKKIRIGTSSVRRRAMLKQYYPHVQAVEMRGNLQTRIEKMRNGDCDALMLAYAGVKRME 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNP--KAQELVKVINHEDTWDSVNCERAFLA 238 + +I + F P GQG I IE N + + + +N D+ + ERA+L Sbjct: 177 NDDMIVMEFDTARFTPPVGQGCIAIEAATNLDPARREAIRTALNDADSESCLLAERAYLK 236 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +L+G C G A +G L + + DG NR +A +G + +YI Sbjct: 237 KLEGGCSIPAFGLACLEGEELVMRAGLSSLDGTRILVKEVRANRSEAETLGNNLGEYILE 296 Query: 299 ISNKNVF 305 + + Sbjct: 297 NGGREML 303 >gi|261837684|gb|ACX97450.1| porphobilinogen deaminase [Helicobacter pylori 51] Length = 306 Score = 209 bits (531), Expect = 5e-52, Method: Composition-based stats. Identities = 100/302 (33%), Positives = 155/302 (51%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-V 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E N K ++ +N E++ + ERAF+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEML-KNHKHFATLQKLNDEESAFCCHLERAFIKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A ++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEAFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|254577639|ref|XP_002494806.1| ZYRO0A10098p [Zygosaccharomyces rouxii] gi|238937695|emb|CAR25873.1| ZYRO0A10098p [Zygosaccharomyces rouxii] Length = 327 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 91/321 (28%), Positives = 149/321 (46%), Gaps = 18/321 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ RIG R S LA+ + + + K P + L T GD+ ++ L GG Sbjct: 1 MSRR-IRIGGRQSQLAIVQSELVKHLIEQ--KFPDITCSVFALQTLGDQQQSKPLYSFGG 57 Query: 61 KGLFTEEIEKKLISGEID----CAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-- 114 K L+T+E+E L + + VHS KDMPT L G ++ R D D + Sbjct: 58 KALWTKELEDLLYDEDDNRKLDIIVHSLKDMPTTLPDGFELGGITERVDPSDCLVMPQGS 117 Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILL 171 ++L L SV+GTSS+RR A L R + RG + TR+ KL++ + I+L Sbjct: 118 PHKNLDTLPAGSVVGTSSVRRSAQLKRKYPHLRFESIRGNLHTRIRKLDDPQNDYQCIIL 177 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+KRL I + + GQGA+ IE + + ++++ + H++T Sbjct: 178 ASAGMKRLGLGYRITNTFDSSVMYHAVGQGALGIEIRAQDKEMKKILDAVCHKNTTVCCL 237 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNRC----DA 285 ER + L+G C I + +T L+ GIV++ DGK E+++ D+ Sbjct: 238 AERQLMRSLEGGCSVPIGVGSRYDETTGYLHLRGIVVSVDGKQAVELNQELAINDVIRDS 297 Query: 286 INIGRDAAQYIRFISNKNVFN 306 I G+ A+ + + + Sbjct: 298 IECGKLLAEKMISNGARKILE 318 >gi|172061376|ref|YP_001809028.1| porphobilinogen deaminase [Burkholderia ambifaria MC40-6] gi|171993893|gb|ACB64812.1| porphobilinogen deaminase [Burkholderia ambifaria MC40-6] Length = 304 Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats. Identities = 104/293 (35%), Positives = 161/293 (54%), Gaps = 5/293 (1%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF +E+E L G Sbjct: 1 MWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELENALADGR 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 D AVHS KD+P L G ++A + RED RD F+S+ SL L +V+GTSSLRR+A Sbjct: 59 ADLAVHSLKDVPMALPDGFALTAIMEREDPRDAFVSNDYASLDALPAGAVVGTSSLRREA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 +L + V+ RG ++TRL KL+ AI+LA AG+KRL E I+ ++++ED PP Sbjct: 119 MLRARYPHLDVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARIRTLIDVEDSPP 178 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + GQGA+ IE + + ++ T +V ER L GSC+ +A A + Sbjct: 179 AAGQGALGIEIAAHRTDVAAWLAPLHDPKTALAVEAERMVSRALGGSCEVPLAAHAVWRA 238 Query: 257 STLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNKNVFN 306 LY G V +DG+ G DA+ +GR + + ++ N Sbjct: 239 GELYLTGRVSTTDGQRVLTAEECGAVMTIADALALGRAVSDELEAQGALDIVN 291 >gi|20089471|ref|NP_615546.1| porphobilinogen deaminase [Methanosarcina acetivorans C2A] gi|23821686|sp|Q8TT56|HEM3_METAC RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|19914376|gb|AAM04026.1| hydroxymethylbilane synthase [Methanosarcina acetivorans C2A] Length = 317 Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats. Identities = 100/302 (33%), Positives = 152/302 (50%), Gaps = 9/302 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI-GGKGLF 64 IGTR S LALA L + I + T GDR T+R L + GG G F Sbjct: 1 MIIGTRGSQLALAQTENVARLLKER----GVETSIKIIKTSGDRFTDRPLHAVSGGVGAF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 E++ +++GEID AVHS KDMPT +GL A L R+ D+ +++ +L +L Sbjct: 57 VRELDDVMLAGEIDIAVHSMKDMPTIRPEGLPTVAVLKRDTPFDILLTYDGTTLDELPEQ 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 ++IGTSSLRR A + R+R D+ + RG I+TRL KL + ILLA AG++R+ E Sbjct: 117 AIIGTSSLRRTAQIRRYRPDLITQELRGNIDTRLRKLKEGQYDGILLAKAGLERMGWEID 176 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 EIL+ + F PSP QG + + T +P+ + V ++H ++ ER ++EL G C Sbjct: 177 G-EILSPDFFCPSPNQGTVAVVTR-ADPEIEAAVSGLDHTESRIVTEIERILISELGGGC 234 Query: 245 KSAIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 + I +A ++ VL+ DGK + + R+ + + K Sbjct: 235 TTPIGSYAELTSDKQEIHIRAEVLSLDGKEDVRIDEFIPMLGGLEKARELGHRLVEMGGK 294 Query: 303 NV 304 + Sbjct: 295 RL 296 >gi|167569219|ref|ZP_02362093.1| porphobilinogen deaminase [Burkholderia oklahomensis C6786] Length = 280 Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats. Identities = 102/270 (37%), Positives = 156/270 (57%), Gaps = 2/270 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L +G ++A + RED RD F+S+ SL +L Sbjct: 71 VKELENALADGRADLAVHSLKDVPMELPEGFALAAVMSREDPRDAFVSNAYASLAELPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARYPQLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+++D P+ GQGA+ IE + ++ T +V ERA L GSC Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDCATALAVEAERAVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFH 274 + +A A +G L+ G V +DG+ Sbjct: 251 EVPLAAHAVWRGDELHLTGSVSTTDGRRVL 280 >gi|254181386|ref|ZP_04887983.1| porphobilinogen deaminase [Burkholderia pseudomallei 1655] gi|184211924|gb|EDU08967.1| porphobilinogen deaminase [Burkholderia pseudomallei 1655] Length = 329 Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAALMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYIRFISN 301 + +A A +G L+ G V +DG H +R DA+ +GR + + Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGA 310 Query: 302 KNVFN 306 + + + Sbjct: 311 RAIVD 315 >gi|300857688|ref|YP_003782671.1| porphobilinogen deaminase [Corynebacterium pseudotuberculosis FRC41] gi|300685142|gb|ADK28064.1| Porphobilinogen deaminase [Corynebacterium pseudotuberculosis FRC41] gi|302329983|gb|ADL20177.1| Porphobilinogen deaminase [Corynebacterium pseudotuberculosis 1002] Length = 296 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 85/301 (28%), Positives = 140/301 (46%), Gaps = 7/301 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 F IGTR S LA + R +L+ ++ + ++T GD + IG G+F Sbjct: 2 TFTIGTRGSLLATTQSGHVRDALISQ----GYSAELSIVTTPGDVNM-APVERIG-VGVF 55 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+ + L+ G D AVHS KD+PT+ + R D RD ++ +L +L Sbjct: 56 TQALRDVLVKGGCDIAVHSFKDLPTQRDPRFHLI-VPERADARDCLVARDGLTLAELPQG 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGT + RR + + R D+ + RG I+TR+ K+ + + A++LAYAG+ R+ + Sbjct: 115 ARIGTGAPRRISQIKALRPDVECVPLRGNIDTRMGKVFSGELDAVVLAYAGLSRVGRGDE 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E+ N E F P+P QGA+ IE V++ A + I + + ER L L+ C Sbjct: 175 ATEVFNPERFLPAPAQGALAIECRVDDAAAVAAINAIRNAEDETCALAERVVLNRLEAGC 234 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A + L G V++ DG + G +A+ IG A + + Sbjct: 235 TAPVAAHSVIIEQELQVTGAVISLDGSKVLRATMTGGLSEAVAIGEKVAAKLIQDGAAEL 294 Query: 305 F 305 Sbjct: 295 L 295 >gi|169869297|ref|XP_001841215.1| porphobilinogen deaminase [Coprinopsis cinerea okayama7#130] gi|116497683|gb|EAU80578.1| porphobilinogen deaminase [Coprinopsis cinerea okayama7#130] Length = 351 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 93/321 (28%), Positives = 146/321 (45%), Gaps = 18/321 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH----NIVIIPLSTKGDRITNRTLTEIG 59 + F + R S LA A + L ++ +ST GD+ ++ L +G Sbjct: 9 RTFVVAARNSQLAQVQANSVLAQLEQLYASSDDPSKPKFTTSFMSTAGDKNQSQALYLMG 68 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT----- 114 GK L+T+E+E L E+D VHS KD+PT L +G + A L RED D + Sbjct: 69 GKALWTKELEVALKDKEVDMLVHSLKDVPTTLPEGCLLGAILEREDPVDALVVKKGKEGV 128 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLA 172 +SL+DL SV+GTSS+RR A L R + +D RG + TRL KL+ + A++LA Sbjct: 129 WKSLEDLPEGSVVGTSSVRRVAQLKRKFPGLRFLDVRGNLNTRLAKLDAEDGPYAALILA 188 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 AG+ RL I LN + QGA+ +E ++ ++ E+++ + H T Sbjct: 189 KAGLVRLGWGDRITADLNPPTLYHAVSQGALAVEIRDDDLESLEILQKLTHRGTDWKCRA 248 Query: 233 ERAFLAELDGSCKSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEV---SRNGNRCDA 285 ERA L L+G C + + L G V + DG E + + +A Sbjct: 249 ERALLRVLEGGCSVPVGVYTTLTKEGGDELLEITGCVTSLDGSEHVEESLKEKVTSVEEA 308 Query: 286 INIGRDAAQYIRFISNKNVFN 306 +G A+ + + + Sbjct: 309 EAVGVKLAKVLMEKGATRILD 329 >gi|302559228|ref|ZP_07311570.1| porphobilinogen deaminase [Streptomyces griseoflavus Tu4000] gi|302476846|gb|EFL39939.1| porphobilinogen deaminase [Streptomyces griseoflavus Tu4000] Length = 319 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 93/317 (29%), Positives = 155/317 (48%), Gaps = 17/317 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +K R+GTR S LA+A + + ++ V P + ++ ++T GD ++ L +IGG Sbjct: 1 MTEKALRLGTRRSKLAMAQSGQVAEAVSQVTGRP---VELVEITTYGD-VSREHLAQIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L GE+D AVHS KD+PT L ++A RED RDV ++ A L D Sbjct: 57 TGVFVAALREALARGEVDFAVHSLKDLPTTQPDELVVAAIPVREDPRDVVVARDALKLTD 116 Query: 121 LALHSVIGTSSLRRKALLLR----WRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + IGT S RR A L D + RG ++TR+ + A++LA AG+ Sbjct: 117 LPRGARIGTGSPRRMAQLNAYARSHGMDFETVPIRGNVDTRIGYVTKGDLDAVVLAAAGL 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ + + + + L+++ P+PGQGA+ IE +N + ++ T +V ER+ Sbjct: 177 NRVGRSEDVTDFLSVDTVLPAPGQGALAIECTADNAALIAELAELDDPLTRAAVTAERSL 236 Query: 237 LAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAIN 287 LA L+ C + + A + G+V +DG ++S G A+ Sbjct: 237 LAALEAGCSAPVGALADLLADGQIVKEMRLRGVVGTTDGSTLVQLSTTGPVPETHEAAMA 296 Query: 288 IGRDAAQYIRFISNKNV 304 +GR+ A + + Sbjct: 297 LGRELATGMLAQGAAGL 313 >gi|167580196|ref|ZP_02373070.1| porphobilinogen deaminase [Burkholderia thailandensis TXDOH] Length = 286 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 102/274 (37%), Positives = 153/274 (55%), Gaps = 2/274 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMELPAGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARYPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++ED P+ GQGA+ IE + ++ T +V ERA L G+C Sbjct: 191 IRALLDVEDSLPAAGQGALGIEIAAGRADVAAWLAPLHDHPTALAVEAERAVSRALGGNC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR 278 + +A A +G L+ G V +DG Sbjct: 251 EVPLAAHAVWRGDELHLTGSVSTTDGARVLAAHA 284 >gi|114329088|ref|YP_746245.1| porphobilinogen deaminase [Granulibacter bethesdensis CGDNIH1] gi|114317262|gb|ABI63322.1| porphobilinogen deaminase [Granulibacter bethesdensis CGDNIH1] Length = 344 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 106/315 (33%), Positives = 155/315 (49%), Gaps = 10/315 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKI--PPHNIVIIPLSTKGDRITNRTLTEI 58 M P R+GTR SPLAL + L I ++T GDR+ +R L EI Sbjct: 28 MHGLPLRVGTRASPLALVQTRAFLARLRSFCPILRDMEVFEEHQINTTGDRVQDRRLAEI 87 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GGKGLF +EI + L ID AVHS KD+ T+L G+ ++ L RED RD I + Sbjct: 88 GGKGLFAKEIHEALADRRIDFAVHSLKDLETQLPPGIVLACTLKREDARDAIILPPGFTP 147 Query: 119 KDL-------ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILL 171 +++GTSS+RR+A L R D+ RG ++TRL KL + A LL Sbjct: 148 PPPGDPFSVLQQGALVGTSSVRRQAQLAHARPDLRFATIRGNVQTRLAKLARGECDASLL 207 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG++RL E+ +L+ E P+ QG + + ++ ++L+ I + Sbjct: 208 ALAGLRRLDMEQAASVVLDTEIMVPAACQGIVGVTVREDDYALRDLLAGIEDREAKAVST 267 Query: 232 CERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 ERA L LDGSC++ I G A G L+ G+V A DG + G +A +G Sbjct: 268 AERALLNLLDGSCRTPIGGHARILSGGVLHLTGLVAAEDGSFLLRRTLQGAVSEAEALGA 327 Query: 291 DAAQYIRFISNKNVF 305 + + +R S ++F Sbjct: 328 ELGRSLRADSPPDIF 342 >gi|56685543|dbj|BAD78765.1| hydroxymethylbilane synthase [Synechococcus elongatus PCC 6301] Length = 300 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 146/291 (50%), Gaps = 5/291 (1%) Query: 19 HAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEID 78 + L ++ P + +ST+GD I + L +IG KGLFT+E+E +++GE+D Sbjct: 2 QTHWVQGELQRLY--PDRQFDVQTMSTQGDIILDVALAKIGDKGLFTKELEVAMLAGEVD 59 Query: 79 CAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL---ALHSVIGTSSLRRK 135 AVHS KD+PT+L +GL + RED D + H L +VIGTSSLRR Sbjct: 60 FAVHSLKDLPTRLPEGLILGCVTEREDPADALVVHDRFKDHQLETLPEGTVIGTSSLRRL 119 Query: 136 ALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFP 195 A L + D RG + TRL KL+ + A++LA AG++RL I +++ Sbjct: 120 AQLRHHYPHLQFKDVRGNLNTRLAKLDAGEYDALILAAAGLQRLSMADRIHQLIPAAVSL 179 Query: 196 PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK 255 + GQGA+ IE +P+ EL+K + HE T ERAFL EL+G C+ I Sbjct: 180 HAVGQGALGIECRAEDPEILELLKALEHEPTSQRCLAERAFLRELEGGCQVPIGVNTAIA 239 Query: 256 GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 TL G+V + DG+ +G D +G A ++ K + + Sbjct: 240 DGTLTLTGMVASLDGQRLLRDQVSGPTSDPEALGLALAAQLKAQGAKEILD 290 >gi|294782423|ref|ZP_06747749.1| hydroxymethylbilane synthase [Fusobacterium sp. 1_1_41FAA] gi|294481064|gb|EFG28839.1| hydroxymethylbilane synthase [Fusobacterium sp. 1_1_41FAA] Length = 301 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 112/304 (36%), Positives = 148/304 (48%), Gaps = 7/304 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT--LTEIG 59 KK IGTR S LALA A ++SL + P I + T GD+ + Sbjct: 1 MKKNIIIGTRGSILALAQANLVKTSLEANY--PDLTFEIKEIVTSGDKDLKSNWENSNAS 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV IS L Sbjct: 59 LKSFFTKEIEQELLDGQIDIAVHSMKDMPAVSPKGLICGAIPDREDARDVLISKNG-FLV 117 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 118 TLPQGAKIGTSSLRRVMNLKAIRPDFEIKHLRGNIHTRLKKLETEDYDAIILAAAGLKRT 177 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I E L+ E FPP+P QG + I+ N+ + + ++K I++E+ V ER F Sbjct: 178 GMADKITEYLSGEAFPPAPAQGVLYIQCRENDEEIKGILKSIHNENIAKIVEIEREFSKI 237 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DG C + + ++ + F G + DGK V + I AA+ I+ Sbjct: 238 FDGGCHTPMGCYSQVDEDKIKFIGA-YSHDGKQ-IRVVIEDDLAKGKEIAHMAAEEIKAK 295 Query: 300 SNKN 303 NK Sbjct: 296 INKG 299 >gi|257470630|ref|ZP_05634720.1| porphobilinogen deaminase [Fusobacterium ulcerans ATCC 49185] Length = 306 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 107/299 (35%), Positives = 152/299 (50%), Gaps = 6/299 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGGKGL 63 IG+R S LA+A + + L + P I + T GD N ++ K Sbjct: 12 IVIGSRGSILAMAQSEMIKKMLE--NNFPELEFEIKKIVTSGDTDLVSNWNNSDKSLKSF 69 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EIE +L++G ID AVHS KDMP +GL A RED RDV +S + ++L +L Sbjct: 70 FTKEIEVELLNGTIDLAVHSMKDMPVVSPEGLICGAVPDREDSRDVLVSKSGKTLMELPA 129 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GTSSLRR L RSD+ + RG I TRLNKL N AILLA AG+KR+ EK Sbjct: 130 GAIVGTSSLRRTMNLKNLRSDLEIKQLRGNIHTRLNKLKNEDYDAILLAAAGLKRVGLEK 189 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I E L+ E F P+P QG + I+ N+ + ++++K I++ED V ER F DG Sbjct: 190 EITEYLDPEKFLPAPAQGVLHIQCRENDDEVKKILKSIHNEDIEKVVVIEREFSKIFDGG 249 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C + + G + GI G+ + S + I + A I+ N Sbjct: 250 CHTPMGCHCILDGDKITLTGIYF--KGENGYSASITEDAALGIKTAQKLADIIKEKIND 306 >gi|50305837|ref|XP_452879.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|55976379|sp|Q6CT60|HEM3_KLULA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|49642012|emb|CAH01730.1| KLLA0C15147p [Kluyveromyces lactis] Length = 327 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 152/319 (47%), Gaps = 16/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ RIG R S LA+ + + + + K ++ + T GD++ ++ L GGK Sbjct: 3 SKETVRIGGRRSKLAVVQSEQVKVMIES--KFSHIECPLLSVHTLGDQVQSKPLYSFGGK 60 Query: 62 GLFTEEIEKKLISG---EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TA 115 ++T+E+E L ID VHS KDMPT L G ++ R D D + Sbjct: 61 AVWTKELEDLLYKDDESRIDLIVHSLKDMPTLLPDGFELGGITKRVDPTDALVMPIGSPY 120 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAY 173 SL +L SV+GTSS+RR A L R ++ RG I+TRL KL++ I+LA Sbjct: 121 SSLSELPDGSVVGTSSVRRSAQLKRKFPNLKFESIRGNIQTRLAKLDDPETPYKCIVLAS 180 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG+ R + I + N + + GQGA+ IE ++ K ++++K I T E Sbjct: 181 AGLMRSGLDSRITQRFNADTMCYAVGQGALGIEIRKDDEKMKKILKEICDPSTTICCLAE 240 Query: 234 RAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVS----RNGNRCDAIN 287 R+ L L+G C I + ST L GIV+ +G + E+ + R D+IN Sbjct: 241 RSLLRTLEGGCSVPIGVVSNYDESTKVLTLKGIVINVEGTEWVEIEHKVTISNEREDSIN 300 Query: 288 IGRDAAQYIRFISNKNVFN 306 G++ A + K + + Sbjct: 301 CGKELAAKLTQNGAKEILD 319 >gi|170085353|ref|XP_001873900.1| predicted protein [Laccaria bicolor S238N-H82] gi|164651452|gb|EDR15692.1| predicted protein [Laccaria bicolor S238N-H82] Length = 342 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 98/320 (30%), Positives = 145/320 (45%), Gaps = 15/320 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVH------KIPPHNIVIIPLSTKGDRITNRT 54 M + F + +R S LA +S + P ++T GD+ ++ Sbjct: 1 MS-RSFILASRESQLAQIQTNSVLASFQALFAANADSSSPTPTFRASFMTTAGDKNQSQA 59 Query: 55 LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT 114 L +GGK L+T+E+E L +D VHS KD+PT L G + L RED D + Sbjct: 60 LYLLGGKALWTKELEVALKEHHVDMLVHSLKDVPTTLPDGCVLGGILEREDPVDSLVVKH 119 Query: 115 ---AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAI 169 +SL +L SVIGTSS+RR A L R + +D RG + TRL KL+ A+ Sbjct: 120 GERWKSLDELPSGSVIGTSSVRRIAQLKRKYPHLKFMDVRGNLNTRLAKLDAPEGPYSAL 179 Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 +LA AG+ RL I L + QGA+ IE ++ +A EL + + H +T Sbjct: 180 ILAKAGLVRLGMGDRITLDLTPPTLFYAVSQGALGIEVRSDDVEALELCERLTHRETQLK 239 Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAI 286 ERA L L+G C + + +G L G V A DG+ E + N DA Sbjct: 240 CLAERACLRVLEGGCSVPVGVASQLEGGVLSLSGCVTAIDGESHVEHKLEEKVENAEDAE 299 Query: 287 NIGRDAAQYIRFISNKNVFN 306 +G A+ + K + + Sbjct: 300 KVGTKLAKILLDSGAKKILD 319 >gi|307595857|ref|YP_003902174.1| porphobilinogen deaminase [Vulcanisaeta distributa DSM 14429] gi|307551058|gb|ADN51123.1| porphobilinogen deaminase [Vulcanisaeta distributa DSM 14429] Length = 304 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 90/300 (30%), Positives = 146/300 (48%), Gaps = 8/300 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S L+L + + V P +I + T GD I ++ L IG KG+F Sbjct: 3 IRIATRGSRLSLIQTEIVMNMIRRVE--PNVRFDVIIVRTTGDVIQDKPLYAIGVKGIFE 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL--KDLAL 123 +E+ L+ E D AVHS KD+P+++ GL ++ + PR+ DV + L Sbjct: 61 KEVNLALLRNEADIAVHSLKDLPSEISPGLVVAGFSPRDPPFDVLVVKDDYPSELMALPS 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GTSS+RR+A LL R DIS+ RG ++TR+NKL AI++A AG+ RL + Sbjct: 121 GARVGTSSVRRRAFLLNVRRDISINVIRGNVDTRINKLIRGDYDAIVIAEAGLVRLINDV 180 Query: 184 V----IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 ++ + PP+PGQG I + + +L+ + ERAFL Sbjct: 181 KSLNIKYTRISPDVLPPAPGQGIIAVVAREKDTDLVDLLNKASDPKARAEALAERAFLRT 240 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + G C + G A +G+ + F + +G+ V +G+ + +G +AA+ + Sbjct: 241 IGGGCHVPVGGMAIHEGARMEFIAGMADLNGERKVLVKLSGSPSNPEELGVNAARELLKR 300 >gi|207092595|ref|ZP_03240382.1| porphobilinogen deaminase [Helicobacter pylori HPKX_438_AG0C1] Length = 306 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 99/302 (32%), Positives = 152/302 (50%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECF---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++E+ PS GQGA+ +E N+ L + +N E + ER F+ L+G C Sbjct: 181 YRKAFSVEEMIPSMGQGALGVEMLKNHKHFITL-QKLNDEKSAFCCRLEREFIKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A ++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEAIAKEKQGDKTKAFDLVQELLEEFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|288561002|ref|YP_003424488.1| porphobilinogen deaminase HemC [Methanobrevibacter ruminantium M1] gi|288543712|gb|ADC47596.1| porphobilinogen deaminase HemC [Methanobrevibacter ruminantium M1] Length = 289 Score = 208 bits (529), Expect = 9e-52, Method: Composition-based stats. Identities = 94/293 (32%), Positives = 152/293 (51%), Gaps = 6/293 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LAL R L + I + + TKGD+ITN L + KGLFT Sbjct: 1 MIVGTRGSKLALVQTDYIRQCL---YNITGEEVEKNIIKTKGDKITNSQLYNMDSKGLFT 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E++ L+ E+D AVHS KD+PT+L + L+I A RE +V IS+ + +L S Sbjct: 58 RELDNALLDEEVDFAVHSLKDVPTELNEDLEIVAVPIRESPNEVLISNYS--WSELEEGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRR+A D + RG +ETR+ K+ + + A ++A AG+ RL +K I Sbjct: 116 TLGTSSLRREAFCKHHNKDFELKPIRGNVETRIEKVMDGQVDATIMAEAGLNRLGLQKYI 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 K + P+ GQGA+ + T + + +E ++ +NH + V E+ L E+ C+ Sbjct: 176 KAKFPTDYIMPAAGQGALAVMTR-KDSEHKETIRKLNHYFSHQEVLAEKTILEEIGVGCQ 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 I + K + L I+L +G+I ++ + +G+ +A +G + + Sbjct: 235 WPIGAISGIKNNQLELKSILLDKNGEILYQKTLSGSIREAKEMGVQIGKEMIE 287 >gi|254196423|ref|ZP_04902847.1| porphobilinogen deaminase [Burkholderia pseudomallei S13] gi|169653166|gb|EDS85859.1| porphobilinogen deaminase [Burkholderia pseudomallei S13] Length = 329 Score = 208 bits (529), Expect = 9e-52, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 167/305 (54%), Gaps = 5/305 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF---HEVSRNGNRCDAINIGRDAAQYIRFISN 301 + +A A +G L+ G V +DG H +R DA+ +GR + + Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGA 310 Query: 302 KNVFN 306 + V + Sbjct: 311 RAVVD 315 >gi|159041687|ref|YP_001540939.1| porphobilinogen deaminase [Caldivirga maquilingensis IC-167] gi|189042877|sp|A8MDU3|HEM3_CALMQ RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157920522|gb|ABW01949.1| porphobilinogen deaminase [Caldivirga maquilingensis IC-167] Length = 305 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 94/295 (31%), Positives = 153/295 (51%), Gaps = 3/295 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S L+L +++ +K +I + T GD ++ L EIG KG+F Sbjct: 3 IRIATRGSALSLKQTKIVMDRILEFNK--DVEFKLIIVKTTGDVDLSKPLYEIGVKGIFE 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E+ + ++ GE D AVHS KDMP ++ L + PR++ RD +S ++ L L+S Sbjct: 61 REVNQAVLRGEADVAVHSLKDMPAQISNDLTLVMTPPRDNPRDALVSLRQYTVDTLPLNS 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSSLRR+ LL R D++V RG ++TR+ KLNN + A+++A AG++RL + Sbjct: 121 IVGTSSLRRRGFLLSLRRDVTVKPIRGNVDTRIRKLNNGEYDALIMAAAGLERLSINANV 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E ++ E PP+PGQG I + + ++++ + E+T+ ERAFL+ + C Sbjct: 181 SE-ISPELMPPAPGQGIIGVVARRDRDDLIKVLRRSSDEETFKEAAAERAFLSRIGAGCH 239 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 + G A F V+ DG S + + GR AA+ + + Sbjct: 240 VPLGGLALLDDGYFDFTYGVVDPDGVEKFINSTRIDARNPEEAGRVAAEDLLRNA 294 >gi|227541639|ref|ZP_03971688.1| porphobilinogen deaminase [Corynebacterium glucuronolyticum ATCC 51866] gi|227182607|gb|EEI63579.1| porphobilinogen deaminase [Corynebacterium glucuronolyticum ATCC 51866] Length = 290 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 78/301 (25%), Positives = 141/301 (46%), Gaps = 13/301 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA A R +L+ ++ + ++T GD+ + + +IG G+F Sbjct: 2 TLRIGTRGSKLATTQAGHVRDALIRA----GYDAELTIITTPGDKNLS-PVQKIG-VGVF 55 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+ + + + EID AVHS KD+PT +GL Y RE + I+ +L L Sbjct: 56 TQALREAMDRDEIDIAVHSCKDLPTGQPEGLATI-YPVRETPCEALIARDGLTLDQLPEG 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT + RR + L R D+ + RG ++TR+ K+ + + A++LA+AG+ R+ + Sbjct: 115 AKVGTGAPRRISQLKALRPDLDIRPLRGNVDTRMGKVTSGELDAVILAHAGLTRIGRGDE 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ + P+P QG + +E+ + + + + S ERA L+ L C Sbjct: 175 ATQVFDPTYLMPAPAQGILAVESRTHVDA----ISTLIDDHATLSAQAERAVLSTLQAGC 230 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A ++ G + A DG + G D + +G A+ +R + + Sbjct: 231 TAPLAAYSTVSGDEITLTAGAFALDGSKQIVETATGT--DPVALGTSVAEKLRACGAEEI 288 Query: 305 F 305 Sbjct: 289 I 289 >gi|153952621|ref|YP_001398427.1| porphobilinogen deaminase [Campylobacter jejuni subsp. doylei 269.97] gi|166201501|sp|A7H4J7|HEM3_CAMJD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|152940067|gb|ABS44808.1| porphobilinogen deaminase [Campylobacter jejuni subsp. doylei 269.97] Length = 307 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 100/303 (33%), Positives = 153/303 (50%), Gaps = 6/303 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LAL + L + H+ +++ TKGD + + L +IGGKGLF Sbjct: 2 KLIIATRKSQLALWQSEHVAQILKNTHQ---IEVLLEGFKTKGDVLLDSPLAKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E+E+ ++ E AVHS KD+P+ +GL ++A RE D +S + L Sbjct: 59 TKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSTDAMLSQNYKDFLSLPKG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGT+SLRRK LL R D+ +I RG + +R+ KL NN+ AI+LA AGIKRL +K Sbjct: 119 AKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNNEFDAIILAMAGIKRLNLDKQ 178 Query: 185 IKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + ++ P+ QGA+ IE + + K EL+K +N E+ + ER F+A L+G Sbjct: 179 VNFVYEFSKDELIPAASQGALGIE-SIKDEKILELLKCLNDENALIETSIEREFIATLEG 237 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C+ I A G + ++ DG + R + D G A+ K Sbjct: 238 GCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIKKNDFKGFGEGLAKEFITKGAK 297 Query: 303 NVF 305 + Sbjct: 298 ELL 300 >gi|241952386|ref|XP_002418915.1| hydroxymethylbilan synthase, putative; porphobilinogen deaminase, putative; pre-uroporphyrinogen synthase, putative [Candida dubliniensis CD36] gi|223642254|emb|CAX44222.1| hydroxymethylbilan synthase, putative [Candida dubliniensis CD36] Length = 340 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 89/314 (28%), Positives = 146/314 (46%), Gaps = 19/314 (6%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG R S LA+ + + ++ D P + I+ LST GD++ + L GGK L+T+E Sbjct: 16 IGGRKSKLAVVQSEIVKKAIED--TFPNLSCSILALSTLGDKVQTQPLYTFGGKSLWTKE 73 Query: 68 IEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119 +E L+ ++D VHS KDMPT L + ++ RED RD + +SLK Sbjct: 74 LEILLLDSVDEFPQLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAIVMKQGSSYKSLK 133 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIK 177 DL +++GTSS+RR + L++ + RG I+TRLNKL+ ++LA AG+ Sbjct: 134 DLPAGAIVGTSSIRRSSQLIKNYPHLRFESVRGNIQTRLNKLDQPNNEYCCLILASAGLI 193 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I ++D + GQGA+ IE + + ++K I ER+ + Sbjct: 194 RLGLGHRITSY--LDDMYYAVGQGALGIEIRKGDDNIKSILKKIEDPIATICCLAERSLM 251 Query: 238 AELDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDA 292 L+G C + + L GI+++ DG + E D +G + Sbjct: 252 RYLEGGCSVPLGVHSDYNESKQELTLKGIIVSPDGTVSIEDQVIKRITCDEDCEQVGIEL 311 Query: 293 AQYIRFISNKNVFN 306 ++ K + + Sbjct: 312 GDKLKAKGAKEILD 325 >gi|153953354|ref|YP_001394119.1| porphobilinogen deaminase [Clostridium kluyveri DSM 555] gi|146346235|gb|EDK32771.1| HemC [Clostridium kluyveri DSM 555] Length = 305 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 109/293 (37%), Positives = 152/293 (51%), Gaps = 6/293 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 FRI TR S LAL L K + + T+GDR + +L +IGGKG+F Sbjct: 18 FRIATRKSKLALVQTDYVIDLLALKFK---MQCEKVLIRTEGDRKLDVSLDKIGGKGVFV 74 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IEK LI AVHS KDMP +LL +I A RED+RDVFIS DL + Sbjct: 75 KDIEKALIEKRAQAAVHSMKDMPNELLDLFEIIAMPVREDVRDVFISPEGIKFLDLPKGA 134 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS+RR + R DI ++ RG IETR+ K+ K I+LA AG+KRL ++I Sbjct: 135 VIGTSSIRRAVQIKNLRHDIEIVPIRGNIETRVRKMKEEKLDGIVLAAAGVKRLGMSEII 194 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E N +F P+ GQGAI +E N + + I++ED V ER+FL +L G C Sbjct: 195 TEYFNPFEFIPAVGQGAIGVEIL-KNSEYASTLGKIDNEDIRMGVEAERSFLKKLQGDCH 253 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 + + ++ +G L G + G + G++ D I +G + I Sbjct: 254 TPVGAYSVIEGEILNITG-IFQV-GNKLIKKDVCGDKWDYIALGESLGEKIIS 304 >gi|73666979|ref|YP_302995.1| porphobilinogen deaminase [Ehrlichia canis str. Jake] gi|123773372|sp|Q3YSA8|HEM3_EHRCJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|72394120|gb|AAZ68397.1| Porphobilinogen deaminase [Ehrlichia canis str. Jake] Length = 298 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 108/295 (36%), Positives = 157/295 (53%), Gaps = 5/295 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LALA E + L P NI ++ + T GD + IGGKGLF Sbjct: 3 IRIGTRGSVLALAQTLEVTNLL--NRYFPEINIQVVKIKTSGDINNKVPINTIGGKGLFI 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ G++D AVHS KD+P GL I L R DVF+S QS+K L +++ Sbjct: 61 KEIEEALLIGKVDLAVHSVKDIPAFYCDGLIIPCVLKRSSPYDVFVSSKYQSIKSLPINA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS+RRK L R D+ VI RG I+TR+ K + + I+LA AG+ R+ K VI Sbjct: 121 TVGTSSIRRKVQLNYLRPDLQVIPVRGNIDTRILKSDIGEFDGIVLAEAGLIRINKCNVI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 KE+L+ + + GQGAIC++ ++ +KV+N ++ V ER+FL ++GSC Sbjct: 181 KEVLDSKIMLSAVGQGAICVQCRADDYNIINKIKVLNCHKSYVCVIAERSFLKTINGSCD 240 Query: 246 SAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + +A A Y T+Y ++ K C+A G D + + Sbjct: 241 TPLAALAQYVDSDTIYMSCMLSNE--KEMVFSDCYFKECNAEESGIDMGKKLINE 293 >gi|219853983|ref|YP_002471105.1| hypothetical protein CKR_0640 [Clostridium kluyveri NBRC 12016] gi|254800246|sp|B9DZL6|HEM3_CLOK1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|219567707|dbj|BAH05691.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 290 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 110/298 (36%), Positives = 153/298 (51%), Gaps = 9/298 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M FRI TR S LAL L K + + T+GDR + +L +IGG Sbjct: 1 MS---FRIATRKSKLALVQTDYVIDLLALKFK---MQCEKVLIRTEGDRKLDVSLDKIGG 54 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG+F ++IEK LI AVHS KDMP +LL +I A RED+RDVFIS D Sbjct: 55 KGVFVKDIEKALIEKRAQAAVHSMKDMPNELLDLFEIIAMPVREDVRDVFISPEGIKFLD 114 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +VIGTSS+RR + R DI ++ RG IETR+ K+ K I+LA AG+KRL Sbjct: 115 LPKGAVIGTSSIRRAVQIKNLRHDIEIVPIRGNIETRVRKMKEEKLDGIVLAAAGVKRLG 174 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++I E N +F P+ GQGAI +E N + + I++ED V ER+FL +L Sbjct: 175 MSEIITEYFNPFEFIPAVGQGAIGVEIL-KNSEYASTLGKIDNEDIRMGVEAERSFLKKL 233 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 G C + + ++ +G L G + G + G++ D I +G + I Sbjct: 234 QGDCHTPVGAYSVIEGEILNITG-IFQV-GNKLIKKDVCGDKWDYIALGESLGEKIIS 289 >gi|326391319|ref|ZP_08212859.1| porphobilinogen deaminase [Thermoanaerobacter ethanolicus JW 200] gi|325992648|gb|EGD51100.1| porphobilinogen deaminase [Thermoanaerobacter ethanolicus JW 200] Length = 299 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 88/300 (29%), Positives = 139/300 (46%), Gaps = 9/300 (3%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK ++GTR S LAL + + + I+ ++T+GD + ++ ++EIGGK Sbjct: 1 MKKVIKVGTRSSELALKQTAMVINEIKKFRQ--DFEFEIVKITTQGDALIDKPVSEIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F +EIE L+ GEID AVHS KDMP ++ KGL++ A L RED +DVF+S DL Sbjct: 59 GVFVKEIESALLKGEIDMAVHSMKDMPYEIPKGLKLMAVLKREDPKDVFVSRDGTQFMDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSSLRR+ L + DI ++ RG + TRL K+ I+L+ AG+ RL Sbjct: 119 KEGAKIGTSSLRRQVQLKALKPDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN-HEDTWDSVNCERAFLAEL 240 E +I E + P+P QG + +E + + T+ + ER L Sbjct: 179 ENIITEYFPPDVVVPAPCQGILSVEIAESFDNIFQEFYPYIVDRKTFFEASVERELLKAF 238 Query: 241 DGSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +C+ +A + + + G + + + Sbjct: 239 GVNCRQPFGAYAQYRKEEDEEKINIKVAYQKEN--KLLKSEATGLIEETDKMIEKLIEEF 296 >gi|108562665|ref|YP_626981.1| porphobilinogen deaminase [Helicobacter pylori HPAG1] gi|123073837|sp|Q1CUR5|HEM3_HELPH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|107836438|gb|ABF84307.1| porphobilinogen deaminase [Helicobacter pylori HPAG1] Length = 306 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 97/302 (32%), Positives = 152/302 (50%), Gaps = 5/302 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A + L I + TKGD+I + L +IGGKGLFT Sbjct: 4 LVIGSRGSELALWQANHIKERLKKECL---IESEIQIVKTKGDKILDTPLNKIGGKGLFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + Sbjct: 61 KELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-KV 184 +GT+SLRR + R D+ RG ++TRL KL + AI+LA AG+ RL+ + Sbjct: 121 KVGTTSLRRSMQIKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAK 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ ++++ PS GQGA+ +E N+ L + +N E + ER F+ L+G C Sbjct: 181 YRKAFSVKEMIPSMGQGALGVEMLKNHKHFITL-QKLNDEKSAFCCRLEREFIKGLNGGC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I A G + ++ +GK + G++ A ++ ++ + K + Sbjct: 240 QIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEEFLQSGAKEI 299 Query: 305 FN 306 Sbjct: 300 LE 301 >gi|68483293|ref|XP_714388.1| likely phorphobilinogen deaminase Hem3p [Candida albicans SC5314] gi|68483380|ref|XP_714346.1| likely phorphobilinogen deaminase Hem3p [Candida albicans SC5314] gi|10720013|sp|O94048|HEM3_CANAL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|3859661|emb|CAA21999.1| Porphobilinogen deaminase [Candida albicans] gi|46435905|gb|EAK95277.1| likely phorphobilinogen deaminase Hem3p [Candida albicans SC5314] gi|46435949|gb|EAK95320.1| likely phorphobilinogen deaminase Hem3p [Candida albicans SC5314] gi|238883889|gb|EEQ47527.1| porphobilinogen deaminase [Candida albicans WO-1] Length = 340 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 89/314 (28%), Positives = 143/314 (45%), Gaps = 19/314 (6%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IG R S LA+ + + + D P + I+ LST GD++ + L GGK L+T+E Sbjct: 16 IGGRKSKLAVVQSEIVKKVIED--TFPNLSCSILALSTLGDKVQTQPLYTFGGKSLWTKE 73 Query: 68 IEKKLISGEI-----DCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119 +E L+ D VHS KDMPT L + ++ RED RD + +SLK Sbjct: 74 LEILLLDSVDEFPKLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAIVMKQGSSYKSLK 133 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIK 177 DL +++GTSS+RR + L++ + RG I+TRLNKL+ ++LA AG+ Sbjct: 134 DLPAGAIVGTSSIRRSSQLIKNYPHLRFESVRGNIQTRLNKLDQPNNEYCCLILASAGLI 193 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I ++D + GQGA+ IE + + ++K I ER+ + Sbjct: 194 RLGLGHRITSY--LDDMYYAVGQGALGIEIRKGDDNIKSILKKIEDPIATICCLAERSLM 251 Query: 238 AELDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDA 292 L+G C + + L GI+++ DG + E D +G + Sbjct: 252 RYLEGGCSVPLGVHSDYNESKQELTLKGIIVSPDGTVSIEDEVIKRITCDEDCEQVGIEL 311 Query: 293 AQYIRFISNKNVFN 306 ++ K + + Sbjct: 312 GDKLKAKGAKEILD 325 >gi|167561971|ref|ZP_02354887.1| porphobilinogen deaminase [Burkholderia oklahomensis EO147] Length = 278 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 103/268 (38%), Positives = 156/268 (58%), Gaps = 2/268 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L +G ++A + RED RD F+S+ SL +L Sbjct: 71 VKELENALADGRADLAVHSLKDVPMELPEGFALAAVMSREDPRDAFVSNAYASLAELPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SV+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 SVVGTSSLRREAMLRARYPQLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+++D P+ GQGA+ IE + ++ T +V ERA L GSC Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDCATALAVEAERAVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKI 272 + +A A +G L+ G V +DG+ Sbjct: 251 EVPLAAHAVWRGDELHLTGSVSTTDGRR 278 >gi|303239240|ref|ZP_07325769.1| porphobilinogen deaminase [Acetivibrio cellulolyticus CD2] gi|302593285|gb|EFL63004.1| porphobilinogen deaminase [Acetivibrio cellulolyticus CD2] Length = 293 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 94/298 (31%), Positives = 148/298 (49%), Gaps = 9/298 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K R+G+R S LA+ + ++ +I + T GD+I + TL +IGGKG Sbjct: 1 MKTIRVGSRDSKLAIIQSQMVMDAIKSY--DSNIKTELITMKTTGDKILDVTLDKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+++ LI+GE+D VHS KDMP ++ + L + A RED RDV I Q+ D Sbjct: 59 LFVKELDEALINGEVDITVHSYKDMPMQIDEDLPVVALSTREDERDVLILPKGQTFSDKP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +G SS RR L ++ RG + TRL KL++ + AI+LA AGIKRL E Sbjct: 119 ----VGCSSERRTMQLKEL-GFENIKPLRGNVITRLKKLDDGEYSAIVLAAAGIKRLGLE 173 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I +++ P+ QG I ++ ++ + + ERAF+ L+G Sbjct: 174 ERISRYFTVDEIMPAACQGIIAVQARKGED--TSYLRCFHSYASQVISEAERAFITALNG 231 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 C S +A +AY L G+ + + KI S++G A +G + A ++ Sbjct: 232 GCSSPVAAYAYLDKDILVLNGLYVDKENKIAVRGSQHGTPAQAAVLGEELANRLKERG 289 >gi|42520403|ref|NP_966318.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410142|gb|AAS14252.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila melanogaster] Length = 292 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 112/295 (37%), Positives = 162/295 (54%), Gaps = 8/295 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LA+A A E + L+D P +I I+ + T GD+ N L EIGGKGLF Sbjct: 3 VKIGTRGSKLAVAQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFI 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE +L+ ID AVHS KDMP GL I L R D FISH SL+ L + Sbjct: 61 KEIETELLENNIDMAVHSLKDMPAFFSGGLTIPCVLERLSSCDAFISHKHNSLESLPQQA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 I TSS+RRK LL R D++++ RG + TR L N I+LA AG+ RL+K +I Sbjct: 121 TIATSSIRRKVQLLNVRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLI 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L + + GQGA+CI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC Sbjct: 178 TEVLPPKVMLSAVGQGAVCIQCRRNDVKIIDLLEKINNNMSFIGVKSERSFMKTVNGSCF 237 Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + +A A + L+ ++ + GK + R DA +G DA ++ Sbjct: 238 TPLAALAEYVSENMLHLRCMLAS--GKNIYFTERTSFIEDAEKMGMDAGLELKSK 290 >gi|158317872|ref|YP_001510380.1| porphobilinogen deaminase [Frankia sp. EAN1pec] gi|158113277|gb|ABW15474.1| porphobilinogen deaminase [Frankia sp. EAN1pec] Length = 354 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 93/335 (27%), Positives = 150/335 (44%), Gaps = 40/335 (11%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++P R+GTR S LA A + + +L P + ++P+ T GD+ +++IGG G Sbjct: 17 RRPLRLGTRRSALARAQSEKVAETLRTRLSRP---VELVPIVTAGDQSQ-VAISQIGGTG 72 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F + L++GEID AVHS KD+PT GL ++A R D RDV +S + + L +L Sbjct: 73 VFVSALRDALLAGEIDLAVHSLKDLPTATPDGLVLAAVPRRADTRDVLVSPSGRRLSELG 132 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GT S RR A LL V+ RG ++TR+ K + + A++LA+AG+ RL + Sbjct: 133 PGARVGTGSPRRAAQLLALGHGFEVVPIRGNVDTRIKKAIDGEVDAVVLAHAGLDRLDRL 192 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI--------------------N 222 + EI++ E P+PGQGA+ IE + Sbjct: 193 DAVTEIISPEVMLPAPGQGALAIECVRTPAGGGPAHDQTGPEAGRGFDEGLAELLRFVLD 252 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYC------------KG----STLYFYGIVL 266 + +V ERAFLA ++ C + + A+ + +V Sbjct: 253 DATSSVAVRAERAFLAGIEAGCTAPVGALAHVLPGTDARLVAGGDDAPAVGEIRLRAVVA 312 Query: 267 ASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 A DG G+ D +G+ A + Sbjct: 313 APDGGRVLRRELTGSAVDPEALGQRLADELLSAGA 347 >gi|212695966|ref|ZP_03304094.1| hypothetical protein ANHYDRO_00499 [Anaerococcus hydrogenalis DSM 7454] gi|212677089|gb|EEB36696.1| hypothetical protein ANHYDRO_00499 [Anaerococcus hydrogenalis DSM 7454] Length = 318 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 91/298 (30%), Positives = 141/298 (47%), Gaps = 4/298 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IG+R S LAL A + L I+ +STKGDRI +R + ++ KG+F Sbjct: 2 IKIGSRASKLALIQANMVKDILEK----EGLEAQIVEISTKGDRIRDRKIDQLNSKGVFV 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EIE+KL+ ID AVHS KDMP+++ L + L ED RD F+ D ++ Sbjct: 58 REIEEKLLDKTIDIAVHSLKDMPSQIDDRLIFTPPLKGEDPRDCFVGKDVFKKMDDLNNA 117 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GT S RR S+I RG +ETR+ K+ + ++LA +G+ R + I Sbjct: 118 LVGTGSNRRVCQGKNHFSNIKFKAIRGNVETRIKKVQSENLDGVILAKSGLIRAGLDGEI 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ F PSP QG + IE + K E+ K + E T + ERAF EL C Sbjct: 178 NFDLDPHIFTPSPCQGILGIEIRKEDKKLFEIFKKNSDEKTLFRMETERAFQKELGADCS 237 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 + + F + G + + +GN + I++ + A+ ++ S K Sbjct: 238 TPMGIFTEIDHDKITLTGSMAFDKDDRINYERVSGNISERIHLAQKLARTLKKKSYKK 295 >gi|153814114|ref|ZP_01966782.1| hypothetical protein RUMTOR_00323 [Ruminococcus torques ATCC 27756] gi|317499921|ref|ZP_07958157.1| porphobilinogen deaminase [Lachnospiraceae bacterium 8_1_57FAA] gi|331087856|ref|ZP_08336781.1| porphobilinogen deaminase [Lachnospiraceae bacterium 3_1_46FAA] gi|145848510|gb|EDK25428.1| hypothetical protein RUMTOR_00323 [Ruminococcus torques ATCC 27756] gi|316898638|gb|EFV20673.1| porphobilinogen deaminase [Lachnospiraceae bacterium 8_1_57FAA] gi|330409551|gb|EGG88992.1| porphobilinogen deaminase [Lachnospiraceae bacterium 3_1_46FAA] Length = 307 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 96/304 (31%), Positives = 148/304 (48%), Gaps = 9/304 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIG+R S LA+ A + + + + II + T GD+I +R+L +GGKGLF Sbjct: 5 IRIGSRESRLAVKQAEIIKDQIRRCDQT--ILVEIITMKTTGDKILDRSLESVGGKGLFV 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+++ L G ID AVHS KDMP + I AY RED RDV I + + + S Sbjct: 63 KELDQALADGRIDLAVHSLKDMPMEESSEFPILAYSRREDPRDVLIYKSEKKEQGTEEGS 122 Query: 126 V-------IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 + IGTSS RR + + + RG I+TRL+KLN + A +LA AG+KR Sbjct: 123 ILTKTGAVIGTSSKRRMIQIQKLYPNAVFQGIRGNIQTRLSKLNKEEYDAAVLAAAGVKR 182 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L E VI ++++ P+ GQG + ++ K + ++ + + ER+F+ Sbjct: 183 LNMEAVIGRYFSVDEVIPAAGQGILAVQGRKEFLKDTVWRQYVDDKKSRVQALAERSFIR 242 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 LDG C S A +A KG+ L G+ + DA ++G A ++ Sbjct: 243 VLDGGCTSPSAAYAKVKGNELELTGLYYNEKSGQYFVKKAASYIEDASSLGERLALTMKK 302 Query: 299 ISNK 302 + Sbjct: 303 QFGE 306 >gi|15607651|ref|NP_215024.1| porphobilinogen deaminase [Mycobacterium tuberculosis H37Rv] gi|31791692|ref|NP_854185.1| porphobilinogen deaminase [Mycobacterium bovis AF2122/97] gi|121636428|ref|YP_976651.1| porphobilinogen deaminase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660279|ref|YP_001281802.1| porphobilinogen deaminase [Mycobacterium tuberculosis H37Ra] gi|148821712|ref|YP_001286466.1| porphobilinogen deaminase [Mycobacterium tuberculosis F11] gi|167970665|ref|ZP_02552942.1| porphobilinogen deaminase [Mycobacterium tuberculosis H37Ra] gi|215402275|ref|ZP_03414456.1| porphobilinogen deaminase [Mycobacterium tuberculosis 02_1987] gi|215410034|ref|ZP_03418842.1| porphobilinogen deaminase [Mycobacterium tuberculosis 94_M4241A] gi|215425741|ref|ZP_03423660.1| porphobilinogen deaminase [Mycobacterium tuberculosis T92] gi|215429335|ref|ZP_03427254.1| porphobilinogen deaminase [Mycobacterium tuberculosis EAS054] gi|215444616|ref|ZP_03431368.1| porphobilinogen deaminase [Mycobacterium tuberculosis T85] gi|218752147|ref|ZP_03530943.1| porphobilinogen deaminase [Mycobacterium tuberculosis GM 1503] gi|219556337|ref|ZP_03535413.1| porphobilinogen deaminase [Mycobacterium tuberculosis T17] gi|224988900|ref|YP_002643587.1| porphobilinogen deaminase [Mycobacterium bovis BCG str. Tokyo 172] gi|254230857|ref|ZP_04924184.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis C] gi|254549461|ref|ZP_05139908.1| porphobilinogen deaminase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185382|ref|ZP_05762856.1| porphobilinogen deaminase [Mycobacterium tuberculosis CPHL_A] gi|260199512|ref|ZP_05767003.1| porphobilinogen deaminase [Mycobacterium tuberculosis T46] gi|260203666|ref|ZP_05771157.1| porphobilinogen deaminase [Mycobacterium tuberculosis K85] gi|289441896|ref|ZP_06431640.1| porphobilinogen deaminase [Mycobacterium tuberculosis T46] gi|289446056|ref|ZP_06435800.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis CPHL_A] gi|289552764|ref|ZP_06441974.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN 605] gi|289568434|ref|ZP_06448661.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis T17] gi|289573100|ref|ZP_06453327.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis K85] gi|289744220|ref|ZP_06503598.1| porphobilinogen deaminase [Mycobacterium tuberculosis 02_1987] gi|289749005|ref|ZP_06508383.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis T92] gi|289752545|ref|ZP_06511923.1| porphobilinogen deaminase [Mycobacterium tuberculosis EAS054] gi|289756587|ref|ZP_06515965.1| porphobilinogen deaminase [Mycobacterium tuberculosis T85] gi|289760632|ref|ZP_06520010.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis GM 1503] gi|294996019|ref|ZP_06801710.1| porphobilinogen deaminase [Mycobacterium tuberculosis 210] gi|297632998|ref|ZP_06950778.1| porphobilinogen deaminase [Mycobacterium tuberculosis KZN 4207] gi|297729974|ref|ZP_06959092.1| porphobilinogen deaminase [Mycobacterium tuberculosis KZN R506] gi|298523991|ref|ZP_07011400.1| porphobilinogen deaminase [Mycobacterium tuberculosis 94_M4241A] gi|313657302|ref|ZP_07814182.1| porphobilinogen deaminase [Mycobacterium tuberculosis KZN V2475] gi|54037281|sp|P64337|HEM3_MYCBO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|54041348|sp|P64336|HEM3_MYCTU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|158512923|sp|A1KFY6|HEM3_MYCBP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|158513358|sp|A5TZP0|HEM3_MYCTA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|254800256|sp|C1AKJ0|HEM3_MYCBT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|3261607|emb|CAB00957.1| PROBABLE PORPHOBILINOGEN DEAMINASE HEMC (PBG) (HYDROXYMETHYLBILANE SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN SYNTHASE) [Mycobacterium tuberculosis H37Rv] gi|31617278|emb|CAD93385.1| PROBABLE PORPHOBILINOGEN DEAMINASE HEMC (PBG) (HYDROXYMETHYLBILANE SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN SYNTHASE) [Mycobacterium bovis AF2122/97] gi|121492075|emb|CAL70538.1| Probable porphobilinogen deaminase hemC [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599916|gb|EAY58926.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis C] gi|148504431|gb|ABQ72240.1| porphobilinogen deaminase [Mycobacterium tuberculosis H37Ra] gi|148720239|gb|ABR04864.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis F11] gi|224772013|dbj|BAH24819.1| porphobilinogen deaminase [Mycobacterium bovis BCG str. Tokyo 172] gi|289414815|gb|EFD12055.1| porphobilinogen deaminase [Mycobacterium tuberculosis T46] gi|289419014|gb|EFD16215.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis CPHL_A] gi|289437396|gb|EFD19889.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN 605] gi|289537531|gb|EFD42109.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis K85] gi|289542188|gb|EFD45836.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis T17] gi|289684748|gb|EFD52236.1| porphobilinogen deaminase [Mycobacterium tuberculosis 02_1987] gi|289689592|gb|EFD57021.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis T92] gi|289693132|gb|EFD60561.1| porphobilinogen deaminase [Mycobacterium tuberculosis EAS054] gi|289708138|gb|EFD72154.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis GM 1503] gi|289712151|gb|EFD76163.1| porphobilinogen deaminase [Mycobacterium tuberculosis T85] gi|298493785|gb|EFI29079.1| porphobilinogen deaminase [Mycobacterium tuberculosis 94_M4241A] gi|326902339|gb|EGE49272.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis W-148] gi|328457228|gb|AEB02651.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN 4207] Length = 309 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 92/308 (29%), Positives = 149/308 (48%), Gaps = 15/308 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H+ ++ +ST+GDR + +G G+FT Sbjct: 2 IRIGTRGSLLATTQAATVRDALIA----GGHSAELVTISTEGDRSM-APIASLG-VGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + +G +D AVHS KD+PT ++A PR D RD ++ +L +L + S Sbjct: 56 TALREAMEAGLVDAAVHSYKDLPTAADPRFTVAAIPPRNDPRDAVVARDGLTLGELPVGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLNK+++ AI++A AG+ RL + + Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNKVSSGDLDAIVVARAGLARLGRLDDV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ +E + + ++ ++ DT +V ERA LA+L+ C Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAGDSRLVAVLAELDDADTRAAVTAERALLADLEAGCS 235 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V A DG S G+ A +G A + Sbjct: 236 APVGAIAEVVESIDEDGRVFEELSLRGCVAALDGSDVIRASGIGSCGRARELGLSVAAEL 295 Query: 297 RFISNKNV 304 + + + Sbjct: 296 FELGAREL 303 >gi|15839903|ref|NP_334940.1| porphobilinogen deaminase [Mycobacterium tuberculosis CDC1551] gi|253797442|ref|YP_003030443.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN 1435] gi|254363472|ref|ZP_04979518.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis str. Haarlem] gi|308231570|ref|ZP_07412948.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu001] gi|308369414|ref|ZP_07417699.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu002] gi|308370431|ref|ZP_07421471.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu003] gi|308371690|ref|ZP_07425840.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu004] gi|308372913|ref|ZP_07430371.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu005] gi|308374024|ref|ZP_07434556.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu006] gi|308375179|ref|ZP_07442991.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu007] gi|308376421|ref|ZP_07438780.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu008] gi|308377443|ref|ZP_07479182.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu009] gi|308378656|ref|ZP_07483377.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu010] gi|308379797|ref|ZP_07487609.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu011] gi|308395586|ref|ZP_07492111.2| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu012] gi|13880040|gb|AAK44754.1| porphobilinogen deaminase [Mycobacterium tuberculosis CDC1551] gi|134148986|gb|EBA41031.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis str. Haarlem] gi|253318945|gb|ACT23548.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis KZN 1435] gi|308216828|gb|EFO76227.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu001] gi|308327689|gb|EFP16540.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu002] gi|308332040|gb|EFP20891.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu003] gi|308335827|gb|EFP24678.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu004] gi|308339432|gb|EFP28283.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu005] gi|308343307|gb|EFP32158.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu006] gi|308347203|gb|EFP36054.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu007] gi|308351144|gb|EFP39995.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu008] gi|308355775|gb|EFP44626.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu009] gi|308359835|gb|EFP48686.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu010] gi|308363637|gb|EFP52488.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu011] gi|308367292|gb|EFP56143.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis SUMu012] gi|323721187|gb|EGB30249.1| porphobilinogen deaminase hemC [Mycobacterium tuberculosis CDC1551A] Length = 312 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 92/308 (29%), Positives = 149/308 (48%), Gaps = 15/308 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H+ ++ +ST+GDR + +G G+FT Sbjct: 5 IRIGTRGSLLATTQAATVRDALIA----GGHSAELVTISTEGDRSM-APIASLG-VGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + +G +D AVHS KD+PT ++A PR D RD ++ +L +L + S Sbjct: 59 TALREAMEAGLVDAAVHSYKDLPTAADPRFTVAAIPPRNDPRDAVVARDGLTLGELPVGS 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLNK+++ AI++A AG+ RL + + Sbjct: 119 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNKVSSGDLDAIVVARAGLARLGRLDDV 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ +E + + ++ ++ DT +V ERA LA+L+ C Sbjct: 179 TETLEPVQMLPAPAQGALAVECRAGDSRLVAVLAELDDADTRAAVTAERALLADLEAGCS 238 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V A DG S G+ A +G A + Sbjct: 239 APVGAIAEVVESIDEDGRVFEELSLRGCVAALDGSDVIRASGIGSCGRARELGLSVAAEL 298 Query: 297 RFISNKNV 304 + + + Sbjct: 299 FELGAREL 306 >gi|326329564|ref|ZP_08195886.1| hydroxymethylbilane synthase [Nocardioidaceae bacterium Broad-1] gi|325952560|gb|EGD44578.1| hydroxymethylbilane synthase [Nocardioidaceae bacterium Broad-1] Length = 336 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 92/312 (29%), Positives = 157/312 (50%), Gaps = 12/312 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGG 60 + R+GTR S LA+ + L H + ++ + + GDR N LT Sbjct: 1 MRTLRLGTRRSQLAVTQSTLVAEMLRAQ----GHIVELVEIVSDGDRTQASNTPLTSANS 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + L + EID AVHS KD+PT +G+++ A LPRED RDV ++ +L + Sbjct: 57 TGVFVSALRDALHAKEIDLAVHSLKDLPTYPEEGIELVAILPREDPRDVIVARDGLTLGE 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S +GT S RR A + + + RG ++TR+ K+ + + A++LA AG+ R+ Sbjct: 117 LPPGSRVGTGSPRRVAQIKALGLGLELAGIRGNVDTRIGKVRSGEFDAVVLARAGLARID 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETH--VNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + E+L+ P+PGQGA+ +E + ++++ ++ T +V ERA LA Sbjct: 177 RLDEVTEVLDPIQVLPAPGQGALAVECREGDADADVRKILTSLDDAPTRAAVEAERAVLA 236 Query: 239 ELDGSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 L+G C + I A +G L+ + L+ DG + +S +G DA +GR A+ Sbjct: 237 TLEGGCAAPIGTLADVVEGEEGPELWVRAVALSLDGSLSVRLSASGPLDDAAGVGRRLAE 296 Query: 295 YIRFISNKNVFN 306 + ++ + Sbjct: 297 EMLAEGAADLTD 308 >gi|227487191|ref|ZP_03917507.1| porphobilinogen deaminase [Corynebacterium glucuronolyticum ATCC 51867] gi|227092849|gb|EEI28161.1| porphobilinogen deaminase [Corynebacterium glucuronolyticum ATCC 51867] Length = 290 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 78/301 (25%), Positives = 141/301 (46%), Gaps = 13/301 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA A R +L+ ++ + ++T GD+ + + +IG G+F Sbjct: 2 TLRIGTRGSKLATTQAGHIRDALIRA----GYDAELTIITTPGDKNLS-PVQKIGI-GVF 55 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+ + + + EID AVHS KD+PT +GL Y RE + I+ +L L Sbjct: 56 TQALREAMDRDEIDIAVHSCKDLPTGQPEGLATI-YPVRETPCEALIARDGLTLDQLPEG 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT + RR + L R D+ + RG ++TR+ K+ + + A++LA+AG+ R+ + Sbjct: 115 AKVGTGAPRRISQLKALRPDLDIRPLRGNVDTRMGKVTSGELDAVILAHAGLTRIGRGDE 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ + P+P QG + +E+ + + + + S ERA L+ L C Sbjct: 175 ATQVFDPTYLMPAPAQGILAVESRTHVDA----ISTLIDDHATLSAQAERAVLSTLQAGC 230 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A ++ G + A DG + G D + +G A+ +R + + Sbjct: 231 TAPLAAYSTVSGDEITLTAGAFALDGSKQIVETATGT--DPVALGTTVAEKLRARGAEEI 288 Query: 305 F 305 Sbjct: 289 I 289 >gi|310780153|ref|YP_003968485.1| hydroxymethylbilane synthase [Ilyobacter polytropus DSM 2926] gi|309749476|gb|ADO84137.1| hydroxymethylbilane synthase [Ilyobacter polytropus DSM 2926] Length = 303 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 103/301 (34%), Positives = 151/301 (50%), Gaps = 6/301 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEI 58 M+K IGTR S LA+A + RS L + + P I + T GD N ++ Sbjct: 2 MKKNKVVIGTRGSLLAVAQSKHVRSMLKEKY--PEIEFEIKEIVTTGDVDLRTNWNNSDT 59 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 K LFT+EIEK+L+ G I AVHS KDMP + GL + RED RDV +S + L Sbjct: 60 SLKSLFTKEIEKELLDGTIHLAVHSMKDMPAESPAGLICGSIPEREDYRDVVVSKSNLKL 119 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L SV+GTSSLRR + R D+ + RG I TRL KL AI+LA AG+KR Sbjct: 120 SELPEGSVVGTSSLRRTMAVKEMRPDLVIEPIRGNIHTRLRKLKEENFDAIVLAAAGLKR 179 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E I + L + P+P QGA+CI+ ++ +E++ I ++ + V ER F Sbjct: 180 VGLENEITQYLETHEMMPAPAQGALCIQCKEDDLFIREILSSITEKEVEEVVEIEREFSR 239 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 DG C + + A G + G+ ++ ++ G R + ++ + A IR Sbjct: 240 IFDGGCHTPMGCSAEIIGDEICLKGMYCHE--EVVYKGEVTGKREEGKSLAQKLAGIIRG 297 Query: 299 I 299 Sbjct: 298 Q 298 >gi|292670850|ref|ZP_06604276.1| hydroxymethylbilane synthase [Selenomonas noxia ATCC 43541] gi|292647471|gb|EFF65443.1| hydroxymethylbilane synthase [Selenomonas noxia ATCC 43541] Length = 271 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 94/264 (35%), Positives = 151/264 (57%), Gaps = 1/264 (0%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 ++TKGDRI + L +IGGKGLFT+E+E+ +++G+ID AVHS KDMPT++ KGL I A Sbjct: 1 MTTKGDRILDAPLAKIGGKGLFTKELEQAMLAGQIDIAVHSLKDMPTEIPKGLIIGAITK 60 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 R D D F+S S+++L + + +GTSSLRR+A LL R D+ ++D RG + TRL KL+ Sbjct: 61 RLDPGDAFVSVNYTSIEELPIGAKVGTSSLRRRAQLLAVRPDLQLLDLRGNVNTRLAKLD 120 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 AI+LA AG+KRL I+ IL+ P+ GQG + IE ++ + ++ ++ Sbjct: 121 AGDFDAIILAAAGLKRLGLGNRIRSILSQRMMLPAVGQGTLAIECRADDTRILSVIDFLH 180 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGN 281 + + ERAFL ++G C+ + +A + L+ ++ + DG G+ Sbjct: 181 DRNMSAAAMAERAFLCRVEGGCQIPVGVYADLKEDGLLHVDAMIASVDGMRVCRSRCTGS 240 Query: 282 RCDAINIGRDAAQYIRFISNKNVF 305 A +G A+ + + + Sbjct: 241 AERAEELGISLAEELLDAGGREIL 264 >gi|256397425|ref|YP_003118989.1| porphobilinogen deaminase [Catenulispora acidiphila DSM 44928] gi|256363651|gb|ACU77148.1| porphobilinogen deaminase [Catenulispora acidiphila DSM 44928] Length = 317 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 90/305 (29%), Positives = 153/305 (50%), Gaps = 7/305 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++ R+GTR S LALA + +L + ++ ++T GD L+ IGG G Sbjct: 16 ERALRLGTRASTLALAQSGMVAEALTAAT---GRAVELVHVTTYGDTSR-EALSVIGGTG 71 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F + + + +G++D AVHS KD+PT +GL ++A R + D ++ L DL Sbjct: 72 VFVNALREAIYAGDVDFAVHSLKDLPTAAPEGLHLAAITERAAVNDALVARDGLKLADLP 131 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GT + RR ALL R D+ ++ RG ++TR+N + + A+++A AG++RL + Sbjct: 132 AGAKVGTGAARRMALLKMIRPDLEIVPIRGNVDTRVNHVRSGDLDAVVVALAGLQRLGRA 191 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + E+ + PSPGQGA+ +E +P+ EL+ V++ T +V ER LA L+ Sbjct: 192 EEATEVFGPDVILPSPGQGALAVEC--KDPELAELLAVLDSPLTRAAVVAERTMLAVLEA 249 Query: 243 SCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C + + G A + L G+V G +S G + +GR AQ + Sbjct: 250 GCSAPVGGHAIALDDNVLSLTGVVATVSGSRGLRLSHAGAVSEPEALGRRVAQALLADGA 309 Query: 302 KNVFN 306 + Sbjct: 310 AELME 314 >gi|239946738|ref|ZP_04698491.1| porphobilinogen deaminase [Rickettsia endosymbiont of Ixodes scapularis] gi|239921014|gb|EER21038.1| porphobilinogen deaminase [Rickettsia endosymbiont of Ixodes scapularis] Length = 350 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 105/350 (30%), Positives = 161/350 (46%), Gaps = 54/350 (15%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR SPLAL + P N I+P+ T GD I N+ L +IGG Sbjct: 1 MTN-SIRIGTRKSPLALIQTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K LF +EIE+ L+ +ID AVHS KD+P ++ + L I+A L R+D RDVF+ +S+++ Sbjct: 58 KALFLKEIEQALLDKKIDLAVHSLKDVPGRIPEELVIAAVLERKDPRDVFVCLNYKSIEE 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++VIG+S++RRKA + + R D+ FRG +++R+ KL + A +LAYAG+KRL Sbjct: 118 LPQNAVIGSSAVRRKAFIQKIRPDLKATVFRGNVDSRIKKLMTGEVDATILAYAGLKRLG 177 Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 ++ P GQG I +E ++ E+ INH T++ + ERAFL Sbjct: 178 AFNPEYCHLIEYSQMLPCIGQGVIAVEIRQDDNAMLEICNQINHIPTFELIKPERAFLEY 237 Query: 240 LDGSCKSAIAGFAYCKGS--------------------------------------TLYF 261 LD +C++ IA ++ + L Sbjct: 238 LDANCRTPIAAYSKYLDADPRHLSKLAYREEFEENTERSTAAYKSVREDASTGLTYKLSL 297 Query: 262 YG------------IVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 ++ DG + N + G AA+ + Sbjct: 298 EVEFGKMSNIQTDFMLGNLDGSKITFHTETTNIKTSKEAGIKAAKMMLEQ 347 >gi|255534181|ref|YP_003094552.1| Porphobilinogen deaminase [Flavobacteriaceae bacterium 3519-10] gi|255340377|gb|ACU06490.1| Porphobilinogen deaminase [Flavobacteriaceae bacterium 3519-10] Length = 311 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 94/304 (30%), Positives = 157/304 (51%), Gaps = 9/304 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +IGTR SPLAL A E L + + H I P+ +KGD+ ++ L +G Sbjct: 8 SMRSIKIGTRNSPLALWQAREVARHLQNNN----HTTDITPIISKGDKNLSQPLYTLGIT 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT++++ L++ E+D AVHS KD+PT+L + ++I A L R+ +DV + + + Sbjct: 64 GIFTKDLDIALLNNEVDIAVHSLKDIPTQLPENVEIIAVLQRDYPQDVLVRKKDAATLE- 122 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 I TSSLRR+A L+ D RG ++TRL KL N A + + A I+R+ Sbjct: 123 LHQLKIATSSLRRRAFWLKEFPGTEFSDIRGNVQTRLTKLEENDFDATMFSLAAIERMG- 181 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + ++ P+P QG + + N+P+ +EL K INH +T ++ ER+FL+ L+ Sbjct: 182 --LSVDYEHLPLMIPAPAQGVVAVCARSNDPEIKELFKEINHRETRICIDIERSFLSTLE 239 Query: 242 GSCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C + I FA + F G + + DG+ E + + G+ A+ I Sbjct: 240 GGCTAPIGAFAEINDLGEVRFTGRICSLDGQNCIETDEIFAWNEHDDFGKILAEKILQNG 299 Query: 301 NKNV 304 + + Sbjct: 300 GREL 303 >gi|184200499|ref|YP_001854706.1| porphobilinogen deaminase [Kocuria rhizophila DC2201] gi|183580729|dbj|BAG29200.1| porphobilinogen deaminase [Kocuria rhizophila DC2201] Length = 314 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 93/313 (29%), Positives = 151/313 (48%), Gaps = 13/313 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M F +GTR S LA+ + ++ + ++ + T+GD + L+++GG Sbjct: 1 MSGAVFTVGTRGSQLAMTQSRWAAEAVSRAG---GIDHELVTVRTEGD-VLTGPLSQMGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + +++ G +D AVHS KD+PT ++GL+I A RED RD + +L + Sbjct: 57 TGVFATALRSQVLDGRVDLAVHSLKDLPTAPVEGLRIVALPEREDPRDALCARDGLTLAE 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL---NNNKAHAILLAYAGIK 177 L + +GT S RR A L R D+ ++D RG + TRLN++ + A++LA +G+K Sbjct: 117 LPEGAAVGTGSPRRVAQLRALRPDLRIVDIRGNVGTRLNRVAPADPGDLDAVVLAASGLK 176 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNP---KAQELVKVINHEDTWDSVNCER 234 RL E I E L+ P+PGQGA+ +E ++ ++H T +V ER Sbjct: 177 RLGLEGRITEYLDPHVMLPAPGQGALALEVSARLDPSGALMRGLEAVDHLPTRLAVTAER 236 Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRD 291 A LA+L+ C + + FA G L +V DG S + +A GR Sbjct: 237 AVLAQLEAGCAAPVGTFARVAGDVLELDVVVANPDGSEVMRRSESVPAPSVEEAEAFGRR 296 Query: 292 AAQYIRFISNKNV 304 A + + Sbjct: 297 IADDLLAQGADRL 309 >gi|124268186|ref|YP_001022190.1| hydroxymethylbilane synthase [Methylibium petroleiphilum PM1] gi|124260961|gb|ABM95955.1| hydroxymethylbilane synthase [Methylibium petroleiphilum PM1] Length = 317 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 102/316 (32%), Positives = 154/316 (48%), Gaps = 27/316 (8%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 I TR S LAL A R+ L P + ++ ++T+GD+I +RTL+++GGKGLF + Sbjct: 9 VIATRESRLALWQAEHVRALLGSRLVEP---VELLGMTTRGDQILDRTLSKVGGKGLFVK 65 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 E+E L +G+ AVHS KD+P L G ++A L RED RD ++S L L +V Sbjct: 66 ELETALEAGDAHLAVHSLKDVPMDLPAGFVLAAVLEREDPRDAWVSPRYADLAALPAGAV 125 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSSLRR + L R D+ + RG ++TRL KL+ + AI+LA AG+KRL + I+ Sbjct: 126 VGTSSLRRLSQLRARRPDLRIEPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGLAERIR 185 Query: 187 EILNIEDFPPSPGQGAICIE----THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + P+ GQGA+ IE +P ++ + HE +W +V+ ERA L G Sbjct: 186 SVFEADAMIPAAGQGALGIELRADAPERHPALWAALRALTHEPSWLAVHAERAVSRALGG 245 Query: 243 SCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAI------------NIG 289 SC +A A + L + + A +G Sbjct: 246 SCSMPLAAHAQWQADGRLVLRAALGSV-------AEAAPALVHAEAGAAVADTAAAEALG 298 Query: 290 RDAAQYIRFISNKNVF 305 AQ +R + Sbjct: 299 LAVAQQLRQRGGDALL 314 >gi|308182412|ref|YP_003926539.1| porphobilinogen deaminase [Helicobacter pylori PeCan4] gi|308064597|gb|ADO06489.1| porphobilinogen deaminase [Helicobacter pylori PeCan4] Length = 306 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 101/307 (32%), Positives = 157/307 (51%), Gaps = 7/307 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 MEK IG+R S LAL A + L I + T GD+I + L +IGG Sbjct: 1 MEK--LVIGSRGSELALWQANHIKERLKKECS---MESEIQIVKTTGDKILDAPLNKIGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ L+ GEID AVHS KD+P KGL ++ R D+RD F+S L Sbjct: 56 KGLFTKELEELLLKGEIDLAVHSLKDVPVVFEKGLDLACTTKRADVRDTFLSMKFPDLMS 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT+SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ Sbjct: 116 LPKGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLE 175 Query: 181 KE-KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + ++ ++E+ PS GQGA+ +E + K ++ +N E++ + ERAF+ Sbjct: 176 IQGAKYRKAFSVEEMIPSMGQGALGVEML-KSHKHFATLQKLNDEESAFCCHLERAFIKG 234 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+G C+ I A G + ++ +GK + G++ A ++ ++ + Sbjct: 235 LNGGCQIPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEAFLQS 294 Query: 300 SNKNVFN 306 K + Sbjct: 295 GAKEILE 301 >gi|328350818|emb|CCA37218.1| hydroxymethylbilane synthase [Pichia pastoris CBS 7435] Length = 376 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 95/316 (30%), Positives = 148/316 (46%), Gaps = 17/316 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++G+R S LA+ A R ++ + P ++ +ST GD++ N+ L GGK L+T Sbjct: 47 LKLGSRKSALAIIQAEIVRQLILKEY--PELETKLVSVSTLGDQVQNKALFTFGGKSLWT 104 Query: 66 EEIEKKLIS-----GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117 +E+E L+ +ID VHS KDMPT L ++ + RED RD + +S Sbjct: 105 KELEMLLLESVGGFDQIDMIVHSLKDMPTHLPDEFELGCIIEREDPRDALVVQDGLSYKS 164 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAG 175 L DL +V+GTSS+RR A LL+ + RG ++TRL KL++ + +LLA AG Sbjct: 165 LADLPEGAVVGTSSVRRSAQLLKNFPHLKFKSVRGNLQTRLRKLDDPDSEYCCLLLAAAG 224 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + R + I LN + S GQGA+ +E + + + + I H T ERA Sbjct: 225 LIRTGLQHRISMYLNDDVMYHSVGQGALGVEIRKGDQFMKNICEKIGHRTTTLRCLAERA 284 Query: 236 FLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNG---NRCDAINIGR 290 L L+G C I T L +V++ +G+ S A + G Sbjct: 285 LLRYLEGGCSVPIGVSTIYSEDTKELTMNSLVVSCNGRDSVTESMTEVVTTEEQAEDFGE 344 Query: 291 DAAQYIRFISNKNVFN 306 AQ + K + + Sbjct: 345 RLAQKLIDQGAKRILD 360 >gi|108797657|ref|YP_637854.1| porphobilinogen deaminase [Mycobacterium sp. MCS] gi|119866744|ref|YP_936696.1| porphobilinogen deaminase [Mycobacterium sp. KMS] gi|108768076|gb|ABG06798.1| hydroxymethylbilane synthase [Mycobacterium sp. MCS] gi|119692833|gb|ABL89906.1| hydroxymethylbilane synthase [Mycobacterium sp. KMS] Length = 314 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 94/316 (29%), Positives = 144/316 (45%), Gaps = 17/316 (5%) Query: 1 MEK--KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M P RIGTR S LA A R +L+ H ++ +ST+GDR + +I Sbjct: 1 MSNADTPIRIGTRASLLATTQAGTIRDALIAR----GHAAELVLISTEGDRNQG-PIADI 55 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G G+FT + + + G +D AVHS KD+PT + I A RED RD ++ L Sbjct: 56 G-VGVFTAALREAIHDGRVDAAVHSYKDLPTAADERFTIPAIPRREDPRDALVARDGLVL 114 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L S +GTSS RR A L + + RG ++TRLN++ N + I++A AG+ R Sbjct: 115 GELPAGSTVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVGNGELDGIVVARAGLAR 174 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + + E L P+P QGA+ +E + L+ ++ DT +V ER LA Sbjct: 175 IGRLGDVTETLEPVQMLPAPAQGALAVECRAGDTGLIALLAELDDADTRAAVTAERVLLA 234 Query: 239 ELDGSCKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 EL+ C + + A + G V A DG S G A ++G Sbjct: 235 ELEAGCSAPVGAIAEVVESIDEDGRVFEEVSLRGCVAALDGSDVIRASGIGTPGRAADLG 294 Query: 290 RDAAQYIRFISNKNVF 305 A + + + + Sbjct: 295 VSVAAELFELGARELI 310 >gi|118619687|ref|YP_908019.1| porphobilinogen deaminase [Mycobacterium ulcerans Agy99] gi|158512390|sp|A0PW29|HEM3_MYCUA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|118571797|gb|ABL06548.1| porphobilinogen deaminase HemC [Mycobacterium ulcerans Agy99] Length = 314 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 94/308 (30%), Positives = 146/308 (47%), Gaps = 15/308 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H ++ +ST GDR ++ + +G G+FT Sbjct: 2 IRIGTRGSLLATTQAAIVRDALIAN----GHAAELVTISTLGDR-SSAPIETLG-VGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + G +D AVHS KD+PT I+A PR+D RD ++ L +L + S Sbjct: 56 TALREAIEDGRVDAAVHSHKDLPTAQDPRFTIAAIPPRQDPRDAVVARDGLVLGELPVGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A + + RG ++TRLN+++N AI++A AG+ RL + + Sbjct: 116 LVGTSSPRRAAQFRALGLGLEIRPLRGNLDTRLNRVSNGDLDAIVVARAGLARLGRLDDV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ IE + + ++ ++ DT +V ERA LAEL+ C Sbjct: 176 TETLEPVQMLPAPAQGALAIECRAGDSRLATVLAELDDADTRAAVTAERALLAELEAGCS 235 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V A DG S G A +G A + Sbjct: 236 APVGAIAEVVESIDEEGRVFEELSLRGCVAALDGSDVIRASGIGTSGRARELGLAVAAEL 295 Query: 297 RFISNKNV 304 + + + Sbjct: 296 FELGAREL 303 >gi|72004296|ref|XP_781025.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115932051|ref|XP_001188143.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 324 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 95/318 (29%), Positives = 143/318 (44%), Gaps = 17/318 (5%) Query: 1 MEKK--PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M K R+G+R S LA+ L VH P I+ + T GD I ++ L I Sbjct: 1 MADKMEIVRVGSRKSELAMIQTNHVVEMLQKVH--PETEFKIVTMETIGDHIQDKPLASI 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--- 115 G LFT+E+EK L E+D VHS KDMP++L + I A RED D + H Sbjct: 59 GESNLFTKELEKALALDEVDMLVHSLKDMPSRLPSNMAIGAICEREDPHDALVLHKKLTG 118 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYA 174 S++ + SV+GTSS+RR A L R + D RG + TRL KL+ + ++LA A Sbjct: 119 ISIETMKEGSVLGTSSVRRVAQLKRKFPHLVFKDVRGNLNTRLRKLDEGQVYDGLVLAVA 178 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G+ R+ E I +IL + S QGA+ IE N + EL++ +NH T ER Sbjct: 179 GMMRMGWEHRISQILKPDICKYSVSQGALGIEIKTKNRRMHELLRQLNHVPTLIRCIAER 238 Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGI------VLASDGKIFHEVSRNGNRCDAINI 288 L L+G C + +A + + + + + + +A + Sbjct: 239 GLLKTLEGGCSAPVAVHSELEENRHSLDAETNEEMKLFS---SVIAPWVSQHAMQEAEAL 295 Query: 289 GRDAAQYIRFISNKNVFN 306 G A+ + + Sbjct: 296 GVSVAKGLFDKGAGPILE 313 >gi|237751827|ref|ZP_04582307.1| porphobilinogen deaminase [Helicobacter bilis ATCC 43879] gi|229373193|gb|EEO23584.1| porphobilinogen deaminase [Helicobacter bilis ATCC 43879] Length = 328 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 100/315 (31%), Positives = 153/315 (48%), Gaps = 14/315 (4%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++KP +GTR S LAL A + L + +V+ + TKGD+I + L +IGGK Sbjct: 11 QEKPLVLGTRGSLLALWQANHIKEKLESL----GFQVVLKTIKTKGDKILDAPLAKIGGK 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT+E+E +L+SG ID AVHS KD+P + L + + RED RD F+S + L Sbjct: 67 GLFTKELENELLSGGIDFAVHSLKDVPIAIPPELMLVSITQREDARDCFVSEKYADIASL 126 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR--L 179 + +GT+SLRR L R R D+ RG ++TRL KL + AI+LA AG+ R L Sbjct: 127 PQGAKVGTTSLRRSMQLKRIRQDLDTQSLRGNVQTRLEKLRKGEFDAIILASAGLNRLDL 186 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETH-------VNNPKAQELVKVINHEDTWDSVNC 232 K + L I F P+ GQG++ IE + ++++ ++ + N Sbjct: 187 KDDIGFISHLQINQFIPAMGQGSLGIECRDPKYSPDFRDQAIMKVLESLHDSKSALCCNI 246 Query: 233 ERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 ERAF+ L G C+S I A + +V D +R N+ + +D Sbjct: 247 ERAFIQLLGGGCQSPIGIHAQILDSKEIEIQCVVGNLDASKVLTETRVCNKGEVEYALQD 306 Query: 292 AAQYIRFISNKNVFN 306 ++ + Sbjct: 307 MINTLKKNGVMEILE 321 >gi|167038985|ref|YP_001661970.1| porphobilinogen deaminase [Thermoanaerobacter sp. X514] gi|300913424|ref|ZP_07130741.1| porphobilinogen deaminase [Thermoanaerobacter sp. X561] gi|307723560|ref|YP_003903311.1| porphobilinogen deaminase [Thermoanaerobacter sp. X513] gi|166853225|gb|ABY91634.1| porphobilinogen deaminase [Thermoanaerobacter sp. X514] gi|300890109|gb|EFK85254.1| porphobilinogen deaminase [Thermoanaerobacter sp. X561] gi|307580621|gb|ADN54020.1| porphobilinogen deaminase [Thermoanaerobacter sp. X513] Length = 299 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 88/300 (29%), Positives = 139/300 (46%), Gaps = 9/300 (3%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK ++GTR S LAL + + + I+ ++T+GD + ++ ++EIGGK Sbjct: 1 MKKVIKVGTRSSELALKQTAMVINEIKKFRQ--DFEFEIVKITTQGDALIDKPVSEIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F +EIE L+ GEID AVHS KDMP ++ KGL++ A L RED +DVF+S DL Sbjct: 59 GVFVKEIESALLKGEIDMAVHSMKDMPYEIPKGLKLMAVLKREDPKDVFVSGDGTQFMDL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSSLRR+ L + DI ++ RG + TRL K+ I+L+ AG+ RL Sbjct: 119 KEGAKIGTSSLRRQVQLKALKPDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN-HEDTWDSVNCERAFLAEL 240 E +I E + P+P QG + +E + + T+ + ER L Sbjct: 179 ENIITEYFPPDVVVPAPCQGILAVEIAESFDNIFQEFYPYIVDRKTFFEASVERELLKAF 238 Query: 241 DGSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +C+ +A + + + G + + + Sbjct: 239 GVNCRQPFGAYAQYRKEEDEEKINIKVAYQKEN--KLLKSEVTGLIEETDKMIEKLIEEF 296 >gi|289577611|ref|YP_003476238.1| porphobilinogen deaminase [Thermoanaerobacter italicus Ab9] gi|289527324|gb|ADD01676.1| porphobilinogen deaminase [Thermoanaerobacter italicus Ab9] Length = 299 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 93/300 (31%), Positives = 141/300 (47%), Gaps = 9/300 (3%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK ++G+R S LAL + + + I+ ++T+GD + ++ ++EIGGK Sbjct: 1 MKKVIKVGSRSSELALVQTQMVINEIKKFRQ--DFEFEIVKITTQGDALIDKPISEIGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F +EIE L+ GEID AVHS KDMP + +GL++ L RED RDVFIS +L Sbjct: 59 GVFVKEIESALLKGEIDMAVHSLKDMPYETPEGLKLIPVLKREDPRDVFISKDGTQFMNL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + IGTSSLRR+ L RSD+ I RG I+TRL K+ I+L+ AG+ RL Sbjct: 119 KEGAKIGTSSLRRQVQLKDLRSDMQTIPIRGNIKTRLRKIEELNLDGIVLSAAGLHRLGL 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPK-AQELVKVINHEDTWDSVNCERAFLAEL 240 E +I E + P+P QG + +E + QE I T+ + ER L Sbjct: 179 ESIITEYFPPDVVVPAPCQGILAVEIAESFDNIFQEFYSYIVDRRTFFEASIERELLKVF 238 Query: 241 DGSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 +C+ +A + + D + G + + + Sbjct: 239 GVNCRQPFGAYAQYRKERDEEKINIKVVYQKED--KLLKSEVTGLIEETDKMIEKLIEEF 296 >gi|328786215|ref|XP_624261.3| PREDICTED: porphobilinogen deaminase-like [Apis mellifera] Length = 357 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 113/342 (33%), Positives = 166/342 (48%), Gaps = 41/342 (11%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + R+G+R S LAL L + H P II +STKGD+I +++L +IG K Sbjct: 6 TRDVIRVGSRKSELALKQTKYVIECLKEYH--PTKEFQIITMSTKGDKILDKSLPKIGEK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HTAQSL 118 LFTEE+E L SG +D VHS KD+PT L +G+ + A L RED RD + + ++L Sbjct: 64 SLFTEELELALESGRVDFVVHSLKDLPTSLPEGMALGAILKREDPRDAVVMSKKYKNKTL 123 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 L SVIGTSSLRR A L R + V + RG + TRL KL+ N AI+LA AG+ Sbjct: 124 STLPEGSVIGTSSLRRSAQLARNMPHLKVENIRGNLNTRLRKLDDENGPFAAIILAAAGL 183 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 KR+ E I ++L E+ + GQGA+ +E + K L++ + +T CER+F Sbjct: 184 KRMNWENRISQLLEPEEALYAVGQGALGVECRETDWKILSLLEPLYDVETTLRCVCERSF 243 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN----------------- 279 L L G C + +A + K L G V + DG+ F + + Sbjct: 244 LKTLGGGCSAPVAVSSTLKNKILTVTGAVWSLDGQKFIKDTSKSKLYIPDDDGEPPKKCP 303 Query: 280 ------------GNRCD-----AINIGRDAAQYIRFISNKNV 304 G + A +G+D + + + +V Sbjct: 304 YREPQLYCSVAPGKVSNISLLGAEQLGKDLGKNLIEKNALDV 345 >gi|288932129|ref|YP_003436189.1| porphobilinogen deaminase [Ferroglobus placidus DSM 10642] gi|288894377|gb|ADC65914.1| porphobilinogen deaminase [Ferroglobus placidus DSM 10642] Length = 292 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 98/299 (32%), Positives = 153/299 (51%), Gaps = 10/299 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ IG+R S LALA A + + L + + + + T GD + ++ L E G Sbjct: 1 MSER-VVIGSRGSKLALAQAEKVKKLLEER----DFEVEVKVIKTHGDIMKDKPLHEFKG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G F I++ L GEID AVHS KD+P++ ++G I+A L RE D FIS ++ Sbjct: 56 MGAFVRAIDEALKRGEIDLAVHSYKDVPSQRVEGTVIAAVLERESACDAFISREGLKFEE 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + + S IGTSSLRR+A + + R D+ V + RG ++TRL KL I++A AG+ RL Sbjct: 116 MPVASKIGTSSLRRRAFVKKLRKDLEVENLRGNLDTRLRKLREGFYDGIIVAEAGLIRLG 175 Query: 181 KEKV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 +K E LN E F PS QG I + + N + +NHE T + ERA L E Sbjct: 176 LDKEIEYERLNPEVFVPSANQGVIAVASRENEAEL---FSFLNHEKTRLETDVERAVLRE 232 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L C +A +G + +L+ +G+ V ++ +A+ + A+ ++ Sbjct: 233 LGIGCAIPAGIYAKAEG-KVRLIVEILSEEGEKSVRVDEKLSKENAVEEAVEIAKNLKS 290 >gi|116199079|ref|XP_001225351.1| hypothetical protein CHGG_07695 [Chaetomium globosum CBS 148.51] gi|88178974|gb|EAQ86442.1| hypothetical protein CHGG_07695 [Chaetomium globosum CBS 148.51] Length = 343 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 101/324 (31%), Positives = 152/324 (46%), Gaps = 25/324 (7%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 ++GTR S LAL ++L H P + ++T GDR + L E+G KGL+ Sbjct: 7 TIKMGTRRSALALRQTELVIAALQSAH--PHVTFEVHAMATAGDRDKSTPLPEMG-KGLW 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH-------TAQS 117 T E+E KL++ ++D VHS KDMPT L +G + RED RDV I + Sbjct: 64 TSELEAKLVARDVDVIVHSLKDMPTTLPEGCVLRCVPAREDPRDVVIFSKAREEAGRYKK 123 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 LKDL +V+GTSS+RR A L R + D RG IETRL K + AI+LA AG+ Sbjct: 124 LKDLPEGAVVGTSSVRRAAQLKRRYPGLVFRDVRGNIETRLRKCDEEGFDAIILAAAGLL 183 Query: 178 RLKKEKVIKEILNIED----FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 RL I + L+ + GQG + +E ++ + +EL+K I T + E Sbjct: 184 RLDLGARIAQYLDSNTEGGGLLHAVGQGGLGLEVREDDEQMKELLKAIEDTPTMTACFAE 243 Query: 234 RAFLAELDGSCKSAIAGFAYC--------KGSTLYFYGIVLASDGKIFHEVSRN---GNR 282 R+ + L+G C I K L +V++ DG E + + Sbjct: 244 RSVMRTLEGGCSVPIGVETAWVEEEEAGEKKKKLQLRAVVVSLDGSQAVEGEKTQEVTSL 303 Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306 A +G++ AQ + + + + Sbjct: 304 EQAEAMGKELAQELAGRGAQQILD 327 >gi|225677334|ref|ZP_03788309.1| porphobilinogen deaminase [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590620|gb|EEH11872.1| porphobilinogen deaminase [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 292 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 110/295 (37%), Positives = 162/295 (54%), Gaps = 8/295 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LA+A A E + L+D P +I I+ + T GD+ N L EIGGKGLF Sbjct: 3 VKIGTRGSKLAVAQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFI 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE +L+ ID AVHS KD+P GL I L R D FISH SL+ L + Sbjct: 61 KEIEAELLENNIDMAVHSLKDVPAFFSGGLTIPCVLERLSPCDAFISHKHNSLESLPQQA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +I TS++RRK LL +R D++++ RG + TR L N I+LA AG+ RL+K +I Sbjct: 121 IIATSAIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLI 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L + + GQGAICI+ N+ K +L++ IN+ ++ V ER+F+ ++ SC Sbjct: 178 TEVLPPKVMLSAVGQGAICIQCRRNDVKIIDLLEKINNNMSFIRVKSERSFMKTVNASCF 237 Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + +A A + L+ ++ D K + R DA +G DA ++ Sbjct: 238 TPLAALAEYVSENMLHLRCMLA--DEKNIYFTERTSFIEDAEKMGMDAGLELKSK 290 >gi|329936060|ref|ZP_08285860.1| porphobilinogen deaminase [Streptomyces griseoaurantiacus M045] gi|329304538|gb|EGG48416.1| porphobilinogen deaminase [Streptomyces griseoaurantiacus M045] Length = 323 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 90/321 (28%), Positives = 156/321 (48%), Gaps = 21/321 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ R+GTR S LA+A + + ++ +V P + ++ ++T GD L +IGG Sbjct: 1 MTEQALRLGTRRSKLAMAQSGQVADAVGEVTGRP---VELVEITTYGDTSR-EHLAQIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L+ GE+D AVHS KD+PT + L ++A RED RDV I+ + D Sbjct: 57 TGVFVAALREALLRGEVDLAVHSLKDLPTTQPEELTLAAVPLREDPRDVLIARDGLAFAD 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + +GT S RR A L + D + RG I+TR+ + + A++LA AG+ Sbjct: 117 LPEGARVGTGSPRRMAQLNAYARDHGTRIETVPIRGNIDTRIGYVRKGELDAVVLAAAGL 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIET----HVNNPKAQELVKVINHEDTWDSVNC 232 R+ + + + L+++ P+PGQGA+ +E + + + ++ T +V Sbjct: 177 NRIGRTSEVTDFLSVDTVLPAPGQGALAVECRTAGNPADAALAAALAQLDDPFTRAAVTA 236 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----C 283 ERA LA L+ C + + A + G+V +DG ++S G Sbjct: 237 ERALLAALEAGCSAPVGALADLLNDGQIDKEMRLRGVVGTTDGSTLVQLSTTGPVPETHD 296 Query: 284 DAINIGRDAAQYIRFISNKNV 304 A+ +GR+ A + + Sbjct: 297 QAMALGRELAAEMLAKGAAGL 317 >gi|99034622|ref|ZP_01314577.1| hypothetical protein Wendoof_01000608 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 302 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 112/295 (37%), Positives = 162/295 (54%), Gaps = 8/295 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LA+A A E + L+D P +I I+ + T GD+ N L EIGGKGLF Sbjct: 13 VKIGTRGSKLAVAQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFI 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE +L+ ID AVHS KDMP GL I L R D FISH SL+ L + Sbjct: 71 KEIETELLENNIDMAVHSLKDMPAFFSGGLTIPCVLERLSSCDAFISHKHNSLESLPQQA 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 I TSS+RRK LL R D++++ RG + TR L N I+LA AG+ RL+K +I Sbjct: 131 TIATSSIRRKVQLLNVRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLI 187 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L + + GQGA+CI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC Sbjct: 188 TEVLPPKVMLSAVGQGAVCIQCRRNDVKIIDLLEKINNNMSFIGVKSERSFMKTVNGSCF 247 Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + +A A + L+ ++ + GK + R DA +G DA ++ Sbjct: 248 TPLAALAEYVSENMLHLRCMLAS--GKNIYFTERTSFIEDAEKMGMDAGLELKSK 300 >gi|296118431|ref|ZP_06837010.1| hydroxymethylbilane synthase [Corynebacterium ammoniagenes DSM 20306] gi|295968572|gb|EFG81818.1| hydroxymethylbilane synthase [Corynebacterium ammoniagenes DSM 20306] Length = 300 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 83/306 (27%), Positives = 135/306 (44%), Gaps = 8/306 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +IGTR S LA A R + D + ++T GD + IG Sbjct: 1 MSELK-KIGTRGSKLATTQAGHVRDWITDN----GTPSELHIVTTAGDVNM-APVERIG- 53 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT + + L E D AVHS KD+PT + + RED R+ I+ +L D Sbjct: 54 VGVFTHALREALHEQECDIAVHSFKDLPTAPDERFHLI-VPKREDNREALIARDGLTLDD 112 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTS+ RR + L R D+ + RG IETR++ + N + A++LAYAG+ R Sbjct: 113 LPEGAKVGTSAPRRISQLKAMRPDLDIRPLRGNIETRMSYVTNGELDAVMLAYAGLVRAG 172 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 ++ + + P+P QGA+ +E + + + V I ERA L L Sbjct: 173 YADRATQVFSPDVLMPAPAQGALAVEVNAQDAELVNAVNAIADAKAGLQAAGERAILRRL 232 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 + C + +A + + + +G V DG S G ++ +G A+ + Sbjct: 233 EAGCTAPVAATSVIEDDLITVHGGVFQLDGSRQAVASETGPLENSYELGIKVAEALIEQG 292 Query: 301 NKNVFN 306 + Sbjct: 293 AFEIIE 298 >gi|238508247|ref|XP_002385322.1| porphobilinogen deaminase Hem3, putative [Aspergillus flavus NRRL3357] gi|220688841|gb|EED45193.1| porphobilinogen deaminase Hem3, putative [Aspergillus flavus NRRL3357] Length = 333 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 97/314 (30%), Positives = 153/314 (48%), Gaps = 15/314 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA+ A R SL P + I L T GD+ + L G K L+ Sbjct: 11 PLRIGTRRSKLAIVQAEGIRDSLQK--TAPNRSYEIETLHTLGDKDKSTALYNFGAKSLW 68 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T E+E+KL SG++D VH KDMPT L + ++A R+D RD + SL+ L Sbjct: 69 TSELEEKLTSGQLDVIVHCLKDMPTTLPESCDLAAITLRDDPRDALVIKAGLPYTSLQTL 128 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRL 179 +V+GTSS+RR A LLR + + RG +ETRL K++N ++ ++++ AG++R+ Sbjct: 129 PEGAVVGTSSVRRSAQLLRLYPHLRFANLRGNVETRLAKVDNPESEYTCMIMSAAGLERI 188 Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + I + + +D + GQGA+ +ET + QEL+ + E + + ERA L Sbjct: 189 GLKHRINQYIGSKDGGILHAVGQGALGLETRKGDSSTQELLNKLVDEKSTLACLAERALL 248 Query: 238 AELDGSCKSAIAGFAYCKGST---LYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRD 291 L+G C I + L IV++ DG + + + +A G++ Sbjct: 249 RTLEGGCSVPIGVETEWVDQSEYFLRMRAIVVSLDGTQSVQDTIDATVRTKDEATVFGKE 308 Query: 292 AAQYIRFISNKNVF 305 A + + Sbjct: 309 LATRLVTAGADAIL 322 >gi|209886240|ref|YP_002290097.1| porphobilinogen deaminase [Oligotropha carboxidovorans OM5] gi|209874436|gb|ACI94232.1| porphobilinogen deaminase [Oligotropha carboxidovorans OM5] Length = 338 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 94/322 (29%), Positives = 144/322 (44%), Gaps = 20/322 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K RIGTR S +ALA E L P ++ I+ T GD+ L ++GGK Sbjct: 10 TDKAMRIGTRKSVMALAQTSEIARQLTAA--DPALDVEIVKFETTGDQDQTGKLLDLGGK 67 Query: 62 G-LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G F +I + G ++ A+HS KDMP + GL I A L R+ D + +L Sbjct: 68 GGAFVAQIRDAVREGRLEAAMHSLKDMPGNEDTPGLVIGATLTRDPPTDALVVRHGVTLA 127 Query: 120 DLAL----HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN----------- 164 DL IGT+++RR A + R + +I FRG +TR+ KL+N Sbjct: 128 DLRRTGGKGFKIGTNAVRRAAYVRRLFPECEIIHFRGAADTRIRKLDNGEKQRLPEGGEV 187 Query: 165 -KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223 A A+++A AG++R+ I + ++ P+ GQG + +E ++ + I+ Sbjct: 188 GPADALVMAQAGLERVGCADRIAHCFSPDEILPAVGQGIVAVECAASDWCTLARLAQIDD 247 Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283 + ER L L+G C S IAG+A +G + VL F EV+R G Sbjct: 248 PVSRCCAAAEREVLWVLNGHCNSPIAGYAIVEGDDVLLKAAVLDEANDHFIEVTRRGPAS 307 Query: 284 DAINIGRDAAQYIRFISNKNVF 305 +GR A + +V Sbjct: 308 RPRELGRAVAFELLAKGAADVI 329 >gi|182437949|ref|YP_001825668.1| porphobilinogen deaminase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326778585|ref|ZP_08237850.1| Porphobilinogen deaminase [Streptomyces cf. griseus XylebKG-1] gi|178466465|dbj|BAG20985.1| putative porphobilinogen deaminase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326658918|gb|EGE43764.1| Porphobilinogen deaminase [Streptomyces cf. griseus XylebKG-1] Length = 328 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 92/313 (29%), Positives = 150/313 (47%), Gaps = 17/313 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + ++ +V + ++ ++T GD L +IGG G+F Sbjct: 14 PLRLGTRRSKLAMAQSGLVAEAVREVT---GRAVELVEITTYGDTSR-EHLAQIGGTGVF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L+ GE+D AVHS KD+PT L ++A RED RD I+ + L Sbjct: 70 VAALREALVRGEVDFAVHSLKDLPTFQPDDLVLAAVPQREDPRDALIARDGLTFGQLPEG 129 Query: 125 SVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +GT S RR A L + + RG ++TR+ + + + A++LA AG+ RL Sbjct: 130 ARVGTGSPRRMAQLNAYARSHGLRIETVPIRGNVDTRIGFVRDGELDAVVLAAAGLSRLG 189 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + E L ++ P+PGQGA+ IE ++ + ++ T +V ERA LA L Sbjct: 190 RSGEVTEFLPVDTVLPAPGQGALAIECAASSADLAAALAELDDPYTRAAVTAERALLAAL 249 Query: 241 DGSCKSAIAGFAY--CKG---STLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGRD 291 + C + + A G + L G+V +DG ++S G DA IGR+ Sbjct: 250 EAGCSAPVGALADLLVDGQVVNELRLRGVVGTTDGSSLVQLSTTGPVPTSHDDAAAIGRE 309 Query: 292 AAQYIRFISNKNV 304 A + + Sbjct: 310 LAAEMLAKGAAGL 322 >gi|240171918|ref|ZP_04750577.1| porphobilinogen deaminase [Mycobacterium kansasii ATCC 12478] Length = 317 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 93/308 (30%), Positives = 145/308 (47%), Gaps = 15/308 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H ++ +ST GDR ++ + +G G+FT Sbjct: 2 IRIGTRGSLLATTQAATVRDALIAN----GHPAELVTISTAGDR-SSAPIETLG-VGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + G +D AVHS KD+PT I+A PR D RD ++ L +L S Sbjct: 56 TALREAIEDGRVDAAVHSHKDLPTAEDPRFTIAAIPPRNDPRDAVVARDGLVLGELPAGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + + Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDDV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ +E + + ++ ++ DT +V ERA LAEL+ C Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAADHRLAAVLAELDDADTRAAVTAERALLAELEAGCS 235 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V A DG S G A +G A + Sbjct: 236 APVGAIAEVVESIDEEGRVFEELSLRGCVAALDGSDVIRASGVGTSGRARELGLSVAAEL 295 Query: 297 RFISNKNV 304 + + + Sbjct: 296 FELGAREL 303 >gi|150016167|ref|YP_001308421.1| porphobilinogen deaminase [Clostridium beijerinckii NCIMB 8052] gi|254800241|sp|A6LSY5|HEM3_CLOB8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|149902632|gb|ABR33465.1| porphobilinogen deaminase [Clostridium beijerinckii NCIMB 8052] Length = 291 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 102/296 (34%), Positives = 152/296 (51%), Gaps = 6/296 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 I TR S LA SL D + + + T+GDR + +L +IGGKG Sbjct: 1 MNKLTIATRKSKLAQTQTEIIMKSLKDKFN---IDSEKMLIVTEGDRKLDVSLAKIGGKG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF ++IE L+ D AVHS KD+P +L +I+A REDIRDV IS K+L Sbjct: 58 LFVKDIEIALLEKRADGAVHSMKDVPYELSHEFEIAAITEREDIRDVLISKDNIPFKELR 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++IGTSS+RR L R+D+ ++ RG ++TRL K+ I+LA AG+KRL +E Sbjct: 118 KGAIIGTSSIRRACQLKLMRNDLDIVPIRGNVQTRLEKMKEQNLDGIILASAGLKRLNEE 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +I E + + F P+ QGA+ IE + + + + + +V ER+F+ L+G Sbjct: 178 DIITEYFDPKVFIPAVAQGALGIECLKTSSAK-KYFEKMEDSNAKLTVEAERSFMRMLNG 236 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C S I ++ +G+ LY GI G + G++ D I +GR A I Sbjct: 237 DCHSLIGAYSEIQGNDLYMIGIY--DIGGRIVKKDILGDKNDHIELGRKLANKILE 290 >gi|239942156|ref|ZP_04694093.1| porphobilinogen deaminase [Streptomyces roseosporus NRRL 15998] gi|239988619|ref|ZP_04709283.1| porphobilinogen deaminase [Streptomyces roseosporus NRRL 11379] gi|291445603|ref|ZP_06584993.1| porphobilinogen deaminase 1 [Streptomyces roseosporus NRRL 15998] gi|291348550|gb|EFE75454.1| porphobilinogen deaminase 1 [Streptomyces roseosporus NRRL 15998] Length = 328 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 90/313 (28%), Positives = 151/313 (48%), Gaps = 17/313 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + ++ +V + ++ ++T GD L +IGG G+F Sbjct: 14 PLRLGTRRSKLAMAQSGLVAEAVREVT---GRAVELVEITTYGDTSR-EHLAQIGGTGVF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L GE+D AVHS KD+PT L ++A RED RD ++ + + L Sbjct: 70 VAALREALARGEVDFAVHSLKDLPTSQPDELVLAAVPQREDPRDALVARDGLTFEQLPDG 129 Query: 125 SVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + IGT S RR A L + + RG ++TR+ + + + A++LA AG+ RL Sbjct: 130 ARIGTGSPRRMAQLNAYARSHGLRIETVPIRGNVDTRIGFVRDGELDAVVLAAAGLSRLG 189 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + + L ++ P+PGQGA+ IE ++ + ++ T +V ERA LA L Sbjct: 190 RTGEVTDFLPVDTVLPAPGQGALAIECAASSADLAAALAELDDPYTRVAVTAERALLAAL 249 Query: 241 DGSCKSAIAGFAY--CKG---STLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGRD 291 + C + + A G + L G+V ++DG ++S G DA +GR+ Sbjct: 250 EAGCSAPVGALADVLVDGHVVNELRLRGVVGSTDGSSLVQLSTTGPVPTSHDDAAALGRE 309 Query: 292 AAQYIRFISNKNV 304 A + + Sbjct: 310 LASEMLAKGAAGL 322 >gi|296809948|ref|XP_002845312.1| porphobilinogen deaminase [Arthroderma otae CBS 113480] gi|238842700|gb|EEQ32362.1| porphobilinogen deaminase [Arthroderma otae CBS 113480] Length = 330 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 149/319 (46%), Gaps = 17/319 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K F IGTR S LA+ R++L+ + P + GD L E K Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRNALVA--RWPDCEFNVHTRDAAGDLNKITPLREFTSKN 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK--- 119 L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPETCTLSAIIKREDPRDALVVKKGQPNMTLA 122 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177 +L SVIGTSS+RR A L R + VID RG I+TRL KL+ + I+LA AG+ Sbjct: 123 ELPAGSVIGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182 Query: 178 RLKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R I + L+ + + GQGA+ +E + + E+++ I + T + ER Sbjct: 183 RTGHGYRISQYLDSKNGQMLHAVGQGALGVEIRAGDARMIEMLREIGDQKTTFACLAERN 242 Query: 236 FLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNGNR---CDAIN 287 L L+G C + + T L IV + DGK E ++G+ A Sbjct: 243 LLRTLEGGCSAPLGVETEWVQDTDGKEMLRLRCIVTSIDGKEAVETEKDGDVQTPEQAEA 302 Query: 288 IGRDAAQYIRFISNKNVFN 306 G+ A + + Sbjct: 303 FGKAVADEMVGKGAGKILE 321 >gi|6319996|ref|NP_010076.1| Hem3p [Saccharomyces cerevisiae S288c] gi|122846|sp|P28789|HEM3_YEAST RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|3771|emb|CAA77804.1| porphobilinogen deaminase [Saccharomyces cerevisiae] gi|1429351|emb|CAA67486.1| hydroxymethylbilane synthase [Saccharomyces cerevisiae] gi|1431340|emb|CAA98783.1| HEM3 [Saccharomyces cerevisiae] gi|190405197|gb|EDV08464.1| phorphobilinogen deaminase [Saccharomyces cerevisiae RM11-1a] gi|256270069|gb|EEU05314.1| Hem3p [Saccharomyces cerevisiae JAY291] gi|259145042|emb|CAY78306.1| Hem3p [Saccharomyces cerevisiae EC1118] gi|285810835|tpg|DAA11659.1| TPA: Hem3p [Saccharomyces cerevisiae S288c] gi|323309897|gb|EGA63098.1| Hem3p [Saccharomyces cerevisiae FostersO] gi|323349387|gb|EGA83611.1| Hem3p [Saccharomyces cerevisiae Lalvin QA23] Length = 327 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 90/321 (28%), Positives = 144/321 (44%), Gaps = 17/321 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + IG R S LA+ + + + + P ++ + L T GD+I + L GG Sbjct: 1 MGPETLHIGGRKSKLAVIQSNHVLKLIEEKY--PDYDCKVFTLQTLGDQIQFKPLYSFGG 58 Query: 61 KGLFTEEIEKKLIS----GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA- 115 K L+T+E+E L ++D VHS KDMPT L +G ++ R D D + Sbjct: 59 KALWTKELEDHLYHDDPSKKLDLIVHSLKDMPTLLPEGFELGGITKRVDPTDCLVMPFYS 118 Query: 116 --QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILL 171 +SL DL ++GTSS+RR A L R + RG I+TRL KL++ + I+L Sbjct: 119 AYKSLDDLPDGGIVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIIL 178 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ R+ E I + + + + GQGA+ IE + K +++ I + Sbjct: 179 ASAGLMRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCL 238 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNR----CDA 285 ERA + L+G C I + T L IV+ +G E D+ Sbjct: 239 SERALMRTLEGGCSVPIGVESKYNEETKKLLLKAIVVDVEGTEAVEDEIEMLIENVKEDS 298 Query: 286 INIGRDAAQYIRFISNKNVFN 306 + G+ A+ + K + + Sbjct: 299 MACGKILAERMIADGAKKILD 319 >gi|169784578|ref|XP_001826750.1| porphobilinogen deaminase [Aspergillus oryzae RIB40] gi|83775497|dbj|BAE65617.1| unnamed protein product [Aspergillus oryzae] Length = 333 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 97/314 (30%), Positives = 153/314 (48%), Gaps = 15/314 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA+ A R SL P + I L T GD+ + L G K L+ Sbjct: 11 PLRIGTRRSKLAIVQAEGIRDSLQK--TAPNRSYEIETLHTLGDKDKSTALYNFGAKSLW 68 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T E+E+KL SG++D VH KDMPT L + ++A R+D RD + SL+ L Sbjct: 69 TSELEEKLTSGQLDVIVHCLKDMPTTLPESCDLAAITLRDDPRDALVIKAGLPYTSLQTL 128 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRL 179 +V+GTSS+RR A LLR + + RG +ETRL K++N ++ ++++ AG++R+ Sbjct: 129 PEGAVVGTSSVRRSAQLLRLYPHLRFANLRGNVETRLAKVDNPESEYTCMIMSAAGLERI 188 Query: 180 KKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 + I + + +D + GQGA+ +ET + QEL+ + E + + ERA L Sbjct: 189 GLKHRINQYIGSKDGGILHAVGQGALGLETRKGDSSTQELLNKLVDEKSTLACLAERALL 248 Query: 238 AELDGSCKSAIAGFAYCKGST---LYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRD 291 L+G C I + L IV++ DG + + + +A G++ Sbjct: 249 RTLEGGCSVPIGVETEWVDQSEYFLRMRAIVVSLDGTQSVQDTIDATVRTKDEATVFGKE 308 Query: 292 AAQYIRFISNKNVF 305 A + + Sbjct: 309 LATRLVTAGADAIL 322 >gi|256845448|ref|ZP_05550906.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_36A2] gi|256719007|gb|EEU32562.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_36A2] Length = 302 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 108/304 (35%), Positives = 147/304 (48%), Gaps = 7/304 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT--LTEIG 59 KK IG+R S LALA A + L P I + T GD+ ++I Sbjct: 1 MKKNIIIGSRGSILALAQANLIKDKLQ--INYPNLTFTIKEIVTSGDKDLKSNWENSDIS 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L Sbjct: 59 LKSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLV 117 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 118 TLPQGAKVGTSSLRRAMNLKTVRPDFEIKHLRGNIHTRLKKLETENYDAIVLAAAGLKRT 177 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I E LN E FPP+P QG + I+ N+ + ++++K I+++ V ER F Sbjct: 178 GLADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKKILKSIHNKAVAKIVEIEREFSKI 237 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DG C + + ++ G + F + L GK + + I AA+ I+ Sbjct: 238 FDGGCHTPMGCYSQINGDKIKFTAVYLDE-GKQ-IKAVVEDDLAKGKEIAHMAAEEIKNK 295 Query: 300 SNKN 303 NK Sbjct: 296 INKG 299 >gi|167618302|ref|ZP_02386933.1| porphobilinogen deaminase [Burkholderia thailandensis Bt4] Length = 278 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 103/268 (38%), Positives = 153/268 (57%), Gaps = 2/268 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P +L G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMELPTGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARYPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L++ED P+ GQGA+ IE + ++ T +V ERA L GSC Sbjct: 191 IRALLDVEDSLPAAGQGALGIEIAAGRADVAAWLAPLHDHATALAVEAERAVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKI 272 + +A A +G L+ G V +DG Sbjct: 251 EVPLAAHAVWRGDELHLTGSVSTTDGAR 278 >gi|146419731|ref|XP_001485826.1| hypothetical protein PGUG_01497 [Meyerozyma guilliermondii ATCC 6260] Length = 371 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 93/319 (29%), Positives = 153/319 (47%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K +IG R LA+A + + L+ K P I+ LST GD+I ++ L GGK Sbjct: 8 TTKHIQIGGRKLTLAVAQSNIVKKHLVA--KFPQLKCSILALSTLGDQIQSQPLYLFGGK 65 Query: 62 GLFTEEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-- 114 L+T+E+E L+ ++D VHS KD+PT L + ++ L R D RDV + Sbjct: 66 ALWTKELETLLMQAIGGLPQLDMIVHSLKDVPTNLPEEFELGCILDRLDPRDVLVMRKGS 125 Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILL 171 +SL +L +++GTSS+RR + L++ + RG I TR+ KL+ +LL Sbjct: 126 KYKSLAELPAGTMVGTSSVRRSSQLMKNYPHLRFDSARGNINTRVQKLDAEDSPFECLLL 185 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG++R+ + I L+ D + GQGA+ +E + + ++L++ I T + Sbjct: 186 AAAGLQRVGLDHRITTYLDAPDMYYAVGQGALGVEIRKGDEQIKQLLQAIEDVPTSLCCH 245 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGN---RCDAI 286 ER+ + L+G C I +T L F IV++ DG F E + +A Sbjct: 246 AERSLMRYLEGGCSVPIGVHTDYDKTTQVLKFNAIVVSPDGNEFVEDKIEMKVTTKSEAD 305 Query: 287 NIGRDAAQYIRFISNKNVF 305 +G+ + K + Sbjct: 306 ALGQQLGDKLIAKGAKEIL 324 >gi|254821058|ref|ZP_05226059.1| porphobilinogen deaminase [Mycobacterium intracellulare ATCC 13950] Length = 315 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 90/308 (29%), Positives = 144/308 (46%), Gaps = 15/308 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ + H ++ ++T GDR ++ + +G G+FT Sbjct: 2 IRIGTRGSLLATTQAGVVRDALIAL----GHPAELVTITTAGDR-SSGPIESLG-VGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + G +D AVHS KD+PT ++A R D RD ++ L +L S Sbjct: 56 TALREAMEEGRVDAAVHSHKDLPTADDPRFAVAAIPVRNDPRDAVVARDGLVLGELPPGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + + Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDDV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ +E + + ++ ++ DT SV ER LAEL+ C Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAGDTRLAAVLAELDDADTRASVTAERTLLAELEAGCS 235 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V A DG S G A +G A + Sbjct: 236 APVGAIAEVVESIDEEGRIFEELSLRGCVAALDGSDVIRASGIGTPGRARELGLSVAAEL 295 Query: 297 RFISNKNV 304 + + + Sbjct: 296 FELGAREL 303 >gi|225706856|gb|ACO09274.1| Porphobilinogen deaminase [Osmerus mordax] Length = 357 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 108/333 (32%), Positives = 155/333 (46%), Gaps = 33/333 (9%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA L ++ P ++ I+ +ST GD+I + L++IG K L Sbjct: 17 RVIRMGTRKSQLARIQTDYVAEKLKTLY--PDVHLEIVAMSTIGDKILDTALSKIGEKSL 74 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLKD 120 FT+E+E L E+D VHS KD+PT L G I A L RE+ D + H +L Sbjct: 75 FTKELENALERNEVDLVVHSLKDLPTTLPTGFTIGAVLQRENPHDAVVLHPKNAGLTLDA 134 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 L SVIGTSSLRR A L + + D RG + TRL KL+ AI+LA AG+KR+ Sbjct: 135 LPSESVIGTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDEKEDYAAIILAAAGLKRM 194 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E + +IL +D + GQGA+ IE + E+V ++H +T ERAFL Sbjct: 195 GWEGRVSQILGPDDCMYAVGQGALAIEVRARDRDILEMVSTLHHPETVLRCIAERAFLKH 254 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDG----KIFHEVSRN---------------- 279 L+G C +A K L G V + DG K + S + Sbjct: 255 LEGGCSVPVAVHTELKDLMLSMTGAVFSLDGADSLKEVMQTSVDTGNQVEEPADTQHVGV 314 Query: 280 -------GNRCDAINIGRDAAQYIRFISNKNVF 305 ++ A +G D A + ++ Sbjct: 315 TARNMPQSSQDAAEKLGVDLATLLLSKGAMDIL 347 >gi|50424323|ref|XP_460748.1| DEHA2F08888p [Debaryomyces hansenii CBS767] gi|55976377|sp|Q6BM23|HEM3_DEBHA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|49656417|emb|CAG89089.1| DEHA2F08888p [Debaryomyces hansenii] Length = 361 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 96/320 (30%), Positives = 156/320 (48%), Gaps = 17/320 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +IG R S LA+ + + +++ K P + ++ LST GD++ ++ L GGK Sbjct: 15 KDNHVQIGGRKSKLAVVQSEIVKECIVE--KFPELSCSVLALSTLGDKVQSKPLYSFGGK 72 Query: 62 GLFTEEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-- 114 L+T+E+E L+ +D VHS KD+PT L + ++ L RED RD + + Sbjct: 73 ALWTKELEILLLEQVEEYPRLDLIVHSLKDIPTNLPEEFELGCILNREDARDALVMKSGS 132 Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILL 171 +SL DL S++GTSS+RR + LL+ + RG ++TRLNKL++ +LL Sbjct: 133 SYKSLADLPDGSLVGTSSVRRSSQLLKNHPKLRFDSVRGNLQTRLNKLDDENSPFECLLL 192 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ R+ I L+ + + GQGA+ IE + K +L+K I T Sbjct: 193 ASAGLIRIGLGDRITAHLDAPEMYYAVGQGALGIEIRKGDEKMLQLLKTIEDLPTTYCCL 252 Query: 232 CERAFLAELDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNG---NRCDAI 286 ER+ + L+G C I ++ + L I+++ DG F E G N+ DA Sbjct: 253 AERSLMRHLEGGCSVPIGVQSHYNESTNELSLKAIIVSPDGIHFVEDEYKGVVNNKDDAD 312 Query: 287 NIGRDAAQYIRFISNKNVFN 306 IG + + + N Sbjct: 313 AIGIKVGDLLSAKGGREILN 332 >gi|169779115|ref|XP_001824022.1| porphobilinogen deaminase [Aspergillus oryzae RIB40] gi|83772761|dbj|BAE62889.1| unnamed protein product [Aspergillus oryzae] Length = 342 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 101/320 (31%), Positives = 151/320 (47%), Gaps = 17/320 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K F +GTR S LAL+ S+L V+ P + I T GD T E K Sbjct: 16 SRKTFTVGTRKSKLALSQTDLVVSALKKVY--PNYEFKIHSQETAGDLNTTIAFREFTTK 73 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119 L+TEE+E+ L++G +D VHS KD+PT L + + RED RDV + Sbjct: 74 NLWTEELEEHLMAGNVDFIVHSLKDVPTTLPPACTLGPMMEREDSRDVLVIKQGLPNMSL 133 Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176 DL SV+GTSS+RR A L + VID RG I TRL KL+ I+LA AG+ Sbjct: 134 SDLPAGSVVGTSSIRRTAQLALKYPHLKVIDVRGNIGTRLAKLDAEDSPYTCIILAAAGL 193 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 RL + I + L+ ++ + GQGA+ IE ++ ++++ I H +T + ER Sbjct: 194 LRLGLDDRISQYLDSKNGGMLYAVGQGALGIEIRKDDQVMRDMLNNIGHNETTFASTAER 253 Query: 235 AFLAELDGSCKSAIAGFAYCK-----GSTLYFYGIVLASDGKIFHEVSRNGNRCD---AI 286 + L L+G C + + L IV++ DGK EV +G+ A Sbjct: 254 SLLRTLEGGCSAPLGVETEWIKSSDGSKKLRMRSIVVSVDGKESAEVEIDGSVDSVQAAE 313 Query: 287 NIGRDAAQYIRFISNKNVFN 306 + G A+ + + + Sbjct: 314 DFGVTVAKELVTKGAEKILE 333 >gi|296168169|ref|ZP_06850190.1| hydroxymethylbilane synthase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896847|gb|EFG76476.1| hydroxymethylbilane synthase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 317 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 94/310 (30%), Positives = 143/310 (46%), Gaps = 16/310 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR S LA A R +L+ H ++ ++T GDR ++ + +G G Sbjct: 3 NVIRIGTRGSLLATTQAGVVRDALIAN----GHPAELVIITTAGDR-SSAPIETLG-VGA 56 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT + + + G +D AVHS KD+PT I+A PR D RDV ++ L +L Sbjct: 57 FTTALREAINDGRVDAAVHSHKDLPTADDPRFTIAAIPPRNDPRDVVVARDGLVLGELPP 116 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + Sbjct: 117 GSLVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLD 176 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + E L P+P QGA+ +E ++ ++ DT SV ERA LAEL+ Sbjct: 177 DVTETLEPVQMLPAPAQGALAVECR-AGDGLAAVLAELDDADTRASVTAERALLAELEAG 235 Query: 244 CKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 C + + A L G V A DG S G A +G A Sbjct: 236 CSAPVGAIAEVVESLDEEGRVFEELSLRGCVAALDGSDVIRASGIGTADRARELGVSVAA 295 Query: 295 YIRFISNKNV 304 + + + + Sbjct: 296 ELFELGAREL 305 >gi|307331356|ref|ZP_07610476.1| porphobilinogen deaminase [Streptomyces violaceusniger Tu 4113] gi|306882979|gb|EFN14045.1| porphobilinogen deaminase [Streptomyces violaceusniger Tu 4113] Length = 329 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 96/313 (30%), Positives = 154/313 (49%), Gaps = 17/313 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + + +V P + ++ ++T GD L +IGG G+F Sbjct: 15 PLRLGTRRSALAMAQSGLVADLVREVTGRP---VELVEITTYGDTSR-EHLAQIGGTGVF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L+SGEID AVHS KD+PT GL+++A RED RD I+ + L Sbjct: 71 VSALREALLSGEIDLAVHSLKDLPTAEPDGLRLAAIPRREDPRDALIARDGLTFAQLPPG 130 Query: 125 SVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 S IGT S RR A L W DI + RG ++TR+ + + + A++LA AG+ RL Sbjct: 131 SRIGTGSPRRAAQLNAWARAFGLDIETVPIRGNVDTRIGYVRSGRLDAVVLAAAGLIRLG 190 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + E+L++ P+PGQGA+ +E ++ + I+ T +V ER+ LA L Sbjct: 191 RIGEATELLDVGHVLPAPGQGALAVECAASSVALTARLAEIDDPYTRVAVTAERSLLAAL 250 Query: 241 DGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGRD 291 + C + + A + G+V +DG ++S G +A ++GR+ Sbjct: 251 EAGCSAPVGALADLLADGQAVTEMRLRGVVGTTDGTTLVQLSTTGPVPASPSEAGDLGRE 310 Query: 292 AAQYIRFISNKNV 304 A + + Sbjct: 311 LAAEMLAKGAAGL 323 >gi|182416929|ref|ZP_02948313.1| porphobilinogen deaminase [Clostridium butyricum 5521] gi|237667199|ref|ZP_04527183.1| hydroxymethylbilane synthase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379227|gb|EDT76728.1| porphobilinogen deaminase [Clostridium butyricum 5521] gi|237655547|gb|EEP53103.1| hydroxymethylbilane synthase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 292 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 106/295 (35%), Positives = 156/295 (52%), Gaps = 6/295 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 + TR S LA SL + + + T+GDR + +L +IGGKGLF Sbjct: 3 KLILATRKSRLAQVQTEIVMDSLKNKINK---ESEKLLIVTEGDRKLDVSLNKIGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 ++IE L+ G D AVHS KD+P +L +I+A + REDIRDV IS S L Sbjct: 60 VKDIECALLEGSADAAVHSMKDVPYELSNEFEITAIIEREDIRDVLISKDGISFSKLRYG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGTSS+RR A L RSDI V+ RG ++TRL K+ + I+LA AGI RLK + + Sbjct: 120 AKIGTSSIRRAAQLKLLRSDIEVVPIRGNVQTRLAKMESENLDGIILAAAGIHRLKLDSI 179 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E + ++F P+ QGAI IE N + + K++++ + +V ER+F+ EL G C Sbjct: 180 ITEYFDPKEFIPAVSQGAIGIECV-KNSENSKYFKMLDNSEARITVEAERSFMRELKGDC 238 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S I ++ G LY G + +G + G + + + +GR A+ I Sbjct: 239 HSLIGAYSEVTGDELYMIG-IYDLNG-VIVRKDIKGKKSNHLEVGRKLAEKILNE 291 >gi|167044207|gb|ABZ08888.1| putative Porphobilinogen deaminase, dipyromethane cofactor binding domain protein [uncultured marine microorganism HF4000_APKG5H11] Length = 322 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 98/299 (32%), Positives = 148/299 (49%), Gaps = 3/299 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++G+R S LAL + L P + + T+GD L +G G+F Sbjct: 18 IKVGSRGSTLALIQDHVVINRLKA--NSPALEFEVDTVRTRGDVDQTSRLAGMG-LGIFV 74 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E++L+ G++D AVHS KDMPT+L GL + A L RED RDV ++ L L + Sbjct: 75 KELEQELLDGKLDIAVHSLKDMPTQLADGLVLGAVLSREDPRDVLVNRYGCPLDGLPKGA 134 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L ++ + V+ RG +ETRL K +A +LA AG+ RL + I Sbjct: 135 KIGTSSPRRAAQLKQYAPQVEVVSIRGNVETRLRKAQGEEADGAILAAAGMIRLGLQDQI 194 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ F P PGQG + +E ++ + EL+ I+ DT ER FLA L G C Sbjct: 195 AEYLSATQFVPPPGQGILAVEARADDFRMLELLSAIDDADTRYEATAERGFLARLGGGCS 254 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A C G + + +DG+ G + D + + DA + ++ Sbjct: 255 IPVGAYARCNGDNIVMTIYMSTADGEKKFSAKIQGLKRDPLQLANDAYLALVERGGADL 313 >gi|254566627|ref|XP_002490424.1| Phorphobilinogen deaminase [Pichia pastoris GS115] gi|238030220|emb|CAY68143.1| Phorphobilinogen deaminase [Pichia pastoris GS115] Length = 344 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 95/316 (30%), Positives = 148/316 (46%), Gaps = 17/316 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++G+R S LA+ A R ++ + P ++ +ST GD++ N+ L GGK L+T Sbjct: 15 LKLGSRKSALAIIQAEIVRQLILKEY--PELETKLVSVSTLGDQVQNKALFTFGGKSLWT 72 Query: 66 EEIEKKLIS-----GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117 +E+E L+ +ID VHS KDMPT L ++ + RED RD + +S Sbjct: 73 KELEMLLLESVGGFDQIDMIVHSLKDMPTHLPDEFELGCIIEREDPRDALVVQDGLSYKS 132 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAG 175 L DL +V+GTSS+RR A LL+ + RG ++TRL KL++ + +LLA AG Sbjct: 133 LADLPEGAVVGTSSVRRSAQLLKNFPHLKFKSVRGNLQTRLRKLDDPDSEYCCLLLAAAG 192 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + R + I LN + S GQGA+ +E + + + + I H T ERA Sbjct: 193 LIRTGLQHRISMYLNDDVMYHSVGQGALGVEIRKGDQFMKNICEKIGHRTTTLRCLAERA 252 Query: 236 FLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNG---NRCDAINIGR 290 L L+G C I T L +V++ +G+ S A + G Sbjct: 253 LLRYLEGGCSVPIGVSTIYSEDTKELTMNSLVVSCNGRDSVTESMTEVVTTEEQAEDFGE 312 Query: 291 DAAQYIRFISNKNVFN 306 AQ + K + + Sbjct: 313 RLAQKLIDQGAKRILD 328 >gi|183980868|ref|YP_001849159.1| porphobilinogen deaminase HemC [Mycobacterium marinum M] gi|238054421|sp|B2HRJ2|HEM3_MYCMM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|183174194|gb|ACC39304.1| porphobilinogen deaminase HemC [Mycobacterium marinum M] Length = 314 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 95/308 (30%), Positives = 147/308 (47%), Gaps = 15/308 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H ++ +ST GDR ++ + +G G+FT Sbjct: 2 IRIGTRGSLLATTQAATVRDALIAN----GHAAELVTISTLGDR-SSAPIETLG-VGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + G +D AVHS KD+PT I+A PR+D RD ++ L +L + S Sbjct: 56 TALREAIEDGRVDAAVHSHKDLPTAQDPRFTIAAIPPRQDPRDAVVARDGLVLGELPVGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLN+++N AI++A AG+ RL + + Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSNGDLDAIVVARAGLARLGRLDDV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ IE + + ++ ++ DT +V ERA LAEL+ C Sbjct: 176 TETLEPVQMLPAPAQGALAIECRAGDSRLATVLAELDDADTRAAVTAERALLAELEAGCS 235 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V A DG S G A +G A + Sbjct: 236 APVGAIAEVVESIDEEGRVFEELSLRGCVAALDGSDVIRASGIGTSGRARELGLAVAAEL 295 Query: 297 RFISNKNV 304 + + + Sbjct: 296 FELGAREL 303 >gi|331230279|ref|XP_003327804.1| porphobilinogen deaminase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309306794|gb|EFP83385.1| porphobilinogen deaminase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 461 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 97/336 (28%), Positives = 144/336 (42%), Gaps = 35/336 (10%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IGTR S LAL A + I +ST GD + L +GGK ++T Sbjct: 67 LIIGTRNSKLALVQAESVEREINKRFSSDQIKTEIKSMSTSGDENLLKPLYLLGGKSVWT 126 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL-- 123 +E+E L++G ID VHS KD+PT L G ++++ + RED RD I +L+ Sbjct: 127 KELEFNLLNGSIDLIVHSLKDVPTSLPAGCELASVMLREDPRDALIIRNGLPFTNLSQLP 186 Query: 124 -HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLK 180 S+IGTSS+RR A L R +++ D RG ++TR KL+ ++ I+LA AG+KR+ Sbjct: 187 AGSIIGTSSVRRVAQLRRRFPNLAFQDIRGNLQTRFKKLDASDSPYTGIILAVAGLKRIG 246 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKA-----------------QELVKVINH 223 + I L D + GQGAI IE + LVK + Sbjct: 247 LAERITSYLEPPDLYHAVGQGAIGIEIRTPPEIKLNETVEETILRERATTVRRLVKSLED 306 Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG----------STLYFYGIVLASDGKIF 273 T S ERA L L+G C + + + L G+V + DG Sbjct: 307 WRTALSCEAERALLRRLEGGCSVPVGVTSSLVDLPMPCPWAPKARLTLTGVVTSVDGLEE 366 Query: 274 HEVSRNGNR---CDAINIGRDAAQYIRFISNKNVFN 306 + DA ++G A + + + Sbjct: 367 VRKEAWLDVCGPKDAAHLGTALADELFRDGADKILD 402 >gi|319949783|ref|ZP_08023807.1| porphobilinogen deaminase [Dietzia cinnamea P4] gi|319436542|gb|EFV91638.1| porphobilinogen deaminase [Dietzia cinnamea P4] Length = 354 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 85/333 (25%), Positives = 144/333 (43%), Gaps = 35/333 (10%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + ++GTR S LA A R +L+ + ++ + T+GD + + IG Sbjct: 1 MSSRTLKVGTRGSTLATTQAGHVRDALIAA----GYPAELVIVRTRGDVVM-APVERIG- 54 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT E+ L G+ D AVHS KD+PT A PR D DV I+ +++ Sbjct: 55 VGVFTLELRAALERGDCDIAVHSYKDLPTARDDRFAPIAVPPRVDPSDVLIARDGLTMET 114 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTS+ RR++ L R D+ + RG I+TR+ + + A++LA AG+ R Sbjct: 115 LPQGARVGTSAPRRRSQLAALRPDLDLHPLRGNIDTRMGYVTSGDLDAVVLAAAGLDRTG 174 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + I++ P+P QGA+ +E ++ +A + V++H + + ER L +L Sbjct: 175 AGERATHRFGIDEMLPAPAQGALAVEARADDTEAIAALAVVDHLPSRVRIAAERTLLRDL 234 Query: 241 DGSCKSAIAGFAYCKGST---------------------LYFYGIVLASDGKIFHEVSRN 279 + C + + A G+ L + +V A DG S Sbjct: 235 EAGCTAPVGARAELSGTDSARSDFAGTDPGADAPAADAVLTLHAVVAAHDGTTVLRTSGT 294 Query: 280 --------GNRCDAINIGRDAAQYIRFISNKNV 304 G A +GR A + ++ Sbjct: 295 TVPAEHPDGPVAAAEELGRRLAAELLDRGASDL 327 >gi|255715311|ref|XP_002553937.1| KLTH0E10604p [Lachancea thermotolerans] gi|238935319|emb|CAR23500.1| KLTH0E10604p [Lachancea thermotolerans] Length = 336 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 97/320 (30%), Positives = 150/320 (46%), Gaps = 17/320 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E + RIG R S LA+ + E + + + ++ + L T GD++ ++ L GGK Sbjct: 10 EHQIVRIGGRKSKLAVIQSHEVKDLIER--EFSQYSCTVRALKTLGDQVQSKPLYSFGGK 67 Query: 62 GLFTEEIEKKLISG----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS---HT 114 ++T+E+E L ID VHS KDMPT L G + A + R D D I Sbjct: 68 AVWTKELEDLLYEKDKEKRIDLIVHSLKDMPTLLPDGFLVGAIIKRVDPTDCIIMAKESP 127 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLA 172 ++L DL SV+GTSS+RR A L R + RG IETRL+KL++ I+LA Sbjct: 128 YKTLDDLPDGSVVGTSSIRRSAQLKRKYPKLVFESVRGNIETRLSKLDDPITPFSCIVLA 187 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 AG+ R+K I + L+ + GQGA+ IE ++P +++ IN ++T Sbjct: 188 TAGLLRVKLAHRITQRLDSSVMYHAVGQGALGIEIRSDDPWIAGILQKINDKETAICCFA 247 Query: 233 ERAFLAELDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNGNRC----DAI 286 ER+ + L+G C I + L +V++ DG E DAI Sbjct: 248 ERSLMRTLEGGCSVPIGVESNYDDTTKQLCLKAVVVSVDGTEAVEDEYTMTIEDMRQDAI 307 Query: 287 NIGRDAAQYIRFISNKNVFN 306 G+ A + K++ + Sbjct: 308 ICGQQLAHKMIKNGAKDILD 327 >gi|326930594|ref|XP_003211431.1| PREDICTED: vacuolar protein sorting-associated protein 11 homolog, partial [Meleagris gallopavo] Length = 1060 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 100/325 (30%), Positives = 145/325 (44%), Gaps = 35/325 (10%) Query: 14 PLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLI 73 LA L + + P I+ +ST GD+I + L++IG K LFT+E+E L Sbjct: 728 QLARIQTDSVVEMLREFY--PDLCFEIVAMSTTGDKILDTALSKIGEKSLFTKELENALE 785 Query: 74 SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL---ALHSVIGTS 130 E+D VHS KD+PT L G I A RE+ D + H K L SVIGTS Sbjct: 786 RNEVDLVVHSLKDLPTSLPPGFTIGAICKRENPLDAVVFHPKNCGKTLSLLPEKSVIGTS 845 Query: 131 SLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKVIKEIL 189 SLRR A L + + D RG + TRL KL+ AI+LA AG+KR+ E I ++L Sbjct: 846 SLRRAAQLKKKFPQLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRMGWENRIGQLL 905 Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 + ED + GQGA+ +E + + +V V++ +T ERAF+ L+G C +A Sbjct: 906 SPEDCLYAVGQGALAVEVRAKDQETLNMVSVLHDGETVLCCIAERAFMKHLEGGCSVPVA 965 Query: 250 GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR--------------------------- 282 K LY G V + DG + + + Sbjct: 966 VNTMLKDGQLYLTGAVYSLDGSDSLKETMQASVNYPQRNEDGPNDDVQHVGITAKNVSGQ 1025 Query: 283 --CDAINIGRDAAQYIRFISNKNVF 305 A N+G + A + K++ Sbjct: 1026 AQEAAENLGIELASLLLSKGAKHIL 1050 >gi|226228000|ref|YP_002762106.1| porphobilinogen deaminase [Gemmatimonas aurantiaca T-27] gi|226091191|dbj|BAH39636.1| porphobilinogen deaminase [Gemmatimonas aurantiaca T-27] Length = 309 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 105/310 (33%), Positives = 156/310 (50%), Gaps = 10/310 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M P RIGTR S LAL A + + L ++ +T GDRI +R L+ IG Sbjct: 1 MMTVPVRIGTRSSELALRQARQVAAQLDAR----GVPSELVEYTTLGDRILDRPLSAIGE 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT E+E L++G IDCAVHS KD+PT +G+ + A L RED RD + Sbjct: 57 KGLFTAELEADLLAGRIDCAVHSLKDLPTADPQGIIVVALLEREDPRDALVVRAGVDAHS 116 Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L + +GTSSLRR+A L RSD+ V + RG + TRL KL+ + A LLA AG+ Sbjct: 117 LDTLPEGARVGTSSLRRRAQLQALRSDLEVCELRGNVGTRLRKLDEGQVDAALLAAAGLH 176 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL I L+ ++ +PGQGAI ++ ++ + ++H T +V ERA L Sbjct: 177 RLGLADRIVAYLDAPEWLSAPGQGAIAVQGRADDEALLSTLSSLDHAPTRVAVTAERALL 236 Query: 238 AELDGSCKSAIAG--FAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 A L+G C+ I + T+ + ++++ DG + + G + A+ Sbjct: 237 AALEGGCQVPIGAAVLEEPEYGTI-LHAVIVSLDGSSAVRGGYPVDHANPAASGIELARQ 295 Query: 296 IRFISNKNVF 305 +R + Sbjct: 296 LRAAGGAQIL 305 >gi|118467030|ref|YP_883768.1| porphobilinogen deaminase [Mycobacterium avium 104] gi|158512461|sp|A0QLI0|HEM3_MYCA1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|118168317|gb|ABK69214.1| porphobilinogen deaminase [Mycobacterium avium 104] Length = 315 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 91/308 (29%), Positives = 144/308 (46%), Gaps = 15/308 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H ++ ++T GDR ++ + +G G+FT Sbjct: 2 IRIGTRGSLLATTQAGGVRDALIAR----GHPAELVTITTAGDR-SSGPIESLG-VGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + G +D AVHS KD+PT ++A R D RD ++ L +L S Sbjct: 56 TALREAIEEGRVDAAVHSHKDLPTADDPRFAVAAIPARNDPRDAVVARDGLVLGELPPGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + + Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLGDV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ +E + + ++ ++ DT SV ERA LAEL+ C Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAGDSRLAAVLAELDDADTRASVTAERALLAELEAGCS 235 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V A DG S G A +G A + Sbjct: 236 APVGAIAEVVESIDEDGRIFEELSLRGCVAALDGSDVIRASGIGTPGRARELGLSVAAEL 295 Query: 297 RFISNKNV 304 + + + Sbjct: 296 FELGAREL 303 >gi|260494552|ref|ZP_05814682.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_33] gi|260197714|gb|EEW95231.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_33] Length = 302 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 109/304 (35%), Positives = 146/304 (48%), Gaps = 7/304 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT--LTEIG 59 KK IG+R S LALA A + L P I + T GD+ +++ Sbjct: 1 MKKNIIIGSRGSILALAQADFIKDKLQ--INYPNLTFTIKEIVTSGDKDLKSNWENSDVS 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 K FT+EIE+ L+ G+ID AVHS KDMP KGL A RED RDV +S L Sbjct: 59 LKSFFTKEIEQGLLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDARDVLVSKNG-FLV 117 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 118 TLPQGAKIGTSSLRRAMNLKAIRPDFEIKHLRGNIHTRLKKLEIEDYDAIVLAAAGLKRT 177 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I E L+ E FPP+P QG + I+ N+ + +E++K I++E+ V ER F Sbjct: 178 GMTDKITEYLSGEVFPPAPAQGVLYIQCRENDKEIKEILKTIHNENVAKIVEIEREFSKI 237 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DG C + + ++ G + F V + GK + I AA+ I+ Sbjct: 238 FDGGCHTPMGCYSQVNGDKIKFTA-VYSDKGKQ-IRAVIEDDLTKGKEIAYMAAEKIKNK 295 Query: 300 SNKN 303 NK Sbjct: 296 INKG 299 >gi|151941802|gb|EDN60158.1| phorphobilinogen deaminase [Saccharomyces cerevisiae YJM789] Length = 327 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 90/321 (28%), Positives = 144/321 (44%), Gaps = 17/321 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + IG R S LA+ + + + + P ++ + L T GD+I + L GG Sbjct: 1 MGPETLHIGGRKSKLAVIQSNHVLKLIEEKY--PDYDCKVFTLQTLGDQIQFKPLYSFGG 58 Query: 61 KGLFTEEIEKKLIS----GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA- 115 K L+T+E+E L ++D VHS KDMPT L +G ++ R D D + Sbjct: 59 KALWTKELEDHLYHDDPSKKLDLIVHSLKDMPTLLPEGFELGGITKRVDPTDCLVMPFYS 118 Query: 116 --QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILL 171 +SL DL ++GTSS+RR A L R + RG I+TRL KL++ + I+L Sbjct: 119 AYKSLDDLPDGGIVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIIL 178 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ R+ E I + + + + GQGA+ IE + K +++ I + Sbjct: 179 ASAGLMRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCL 238 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNR----CDA 285 ERA + L+G C I + T L IV+ +G E D+ Sbjct: 239 SERALMRTLEGGCSVPIGVESKYNEETKKLLLKAIVVDVEGTEAVEDKIEMLIENVKEDS 298 Query: 286 INIGRDAAQYIRFISNKNVFN 306 + G+ A+ + K + + Sbjct: 299 MACGKILAERMIADGAKKILD 319 >gi|41410101|ref|NP_962937.1| porphobilinogen deaminase [Mycobacterium avium subsp. paratuberculosis K-10] gi|254777076|ref|ZP_05218592.1| porphobilinogen deaminase [Mycobacterium avium subsp. avium ATCC 25291] gi|55976459|sp|Q73SS0|HEM3_MYCPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|41398934|gb|AAS06553.1| HemC [Mycobacterium avium subsp. paratuberculosis K-10] Length = 315 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 91/308 (29%), Positives = 144/308 (46%), Gaps = 15/308 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H ++ ++T GDR ++ + +G G+FT Sbjct: 2 IRIGTRGSLLATTQAGGVRDALIAR----GHPAELVTITTAGDR-SSGPIESLG-VGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + G +D AVHS KD+PT ++A R D RD ++ L +L S Sbjct: 56 TALREAIEEGRVDAAVHSHKDLPTADDPRFAVAAIPARNDPRDAVVARDGLVLAELPPGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + + Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLGDV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ +E + + ++ ++ DT SV ERA LAEL+ C Sbjct: 176 TETLEPVQMLPAPAQGALAVECRAGDSRLAAVLAELDDADTRASVTAERALLAELEAGCS 235 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V A DG S G A +G A + Sbjct: 236 APVGAIAEVVESIDEDGRIFEELSLRGCVAALDGSDVIRASGIGTPGRARELGLSVAAEL 295 Query: 297 RFISNKNV 304 + + + Sbjct: 296 FELGAREL 303 >gi|326472408|gb|EGD96417.1| porphobilinogen deaminase [Trichophyton tonsurans CBS 112818] gi|326481632|gb|EGE05642.1| porphobilinogen deaminase [Trichophyton equinum CBS 127.97] Length = 331 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 98/320 (30%), Positives = 151/320 (47%), Gaps = 18/320 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K F IGTR S LA+ R +L+ + P + GD L E K Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRDALVA--RWPDCEFNVHTRDAAGDLNKVTPLREFTSKN 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK--- 119 L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPEACTLSAIMKREDPRDALVVKRGQPKTTLA 122 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177 +L SV+GTSS+RR A L R + VID RG I+TRL KL+ + I+LA AG+ Sbjct: 123 ELPAGSVVGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER Sbjct: 183 RSGHGDRIAQYLDSKNGKMLHAVGQGALGVEIRADDEKMVEMLREIGDQKTTFACLAERN 242 Query: 236 FLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 L L+G C + + KG L IV + DGK E+ ++ N A Sbjct: 243 LLRTLEGGCSAPLGVETEWVPDASGKGEMLRLRCIVTSIDGKEAVEIEKDCNVQTPEQAE 302 Query: 287 NIGRDAAQYIRFISNKNVFN 306 G+ A + + Sbjct: 303 AFGKAVADEMVEKGAGKILE 322 >gi|195490377|ref|XP_002093114.1| GE21148 [Drosophila yakuba] gi|194179215|gb|EDW92826.1| GE21148 [Drosophila yakuba] Length = 653 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 102/319 (31%), Positives = 150/319 (47%), Gaps = 23/319 (7%) Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M +K R+G+R S LAL L ++ P I +ST GDR+ N +L +I Sbjct: 1 MSAQEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKI 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + Sbjct: 59 GEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKG 118 Query: 119 KDL---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAY 173 + SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA Sbjct: 119 HTIASLPQGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQ 178 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG+ R+ I ++L D + GQGA+ +E N+ + +++ + +T + E Sbjct: 179 AGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAE 238 Query: 234 RAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCD 284 R+FL L G C + +A ++ KG L G V + DG I + Sbjct: 239 RSFLKTLGGGCSAPVAVWSTLKGEPLNGNSQEVGLSLTGAVWSLDGAIEIRNHLACALNE 298 Query: 285 AINIGRDAAQYIRFISNKN 303 G R + Sbjct: 299 QKLEGEQ-----RKRGAQE 312 >gi|327469193|gb|EGF14665.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK330] Length = 306 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 108/303 (35%), Positives = 161/303 (53%), Gaps = 9/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121 +F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 119 PEGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + L P+ QGA+ +E + + +L+ + E T V ERA LA Sbjct: 179 LDQSHLHIQPLETSLCLPAISQGALAVECREEDKELLQLLATVQDEKTAAEVAVERAVLA 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +++ C IA FA KG ++ DG+ + D + A + + Sbjct: 239 QMNADCTFPIAAFAQKKGQDYQLEAMLAKEDGQCVF---VSLKGQDGQELAEQAVRQLAD 295 Query: 299 ISN 301 Sbjct: 296 KGA 298 >gi|145294537|ref|YP_001137358.1| porphobilinogen deaminase [Corynebacterium glutamicum R] gi|158513580|sp|A4QB59|HEM3_CORGB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|23507698|gb|AAN38291.1| porphobilinogen deaminase [Corynebacterium glutamicum] gi|140844457|dbj|BAF53456.1| hypothetical protein [Corynebacterium glutamicum R] Length = 302 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 88/304 (28%), Positives = 142/304 (46%), Gaps = 10/304 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IGTR S LA A R L + + ++T GD + + IG G+F Sbjct: 2 TLKIGTRGSKLATTQAGTIRDQLK----YFGRDAELHIVTTPGDVNMS-PVERIG-VGVF 55 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+ + L +GE D AVHS KD+PT + R D R+ I+ +L +L Sbjct: 56 TQALRDVLHAGECDVAVHSMKDLPTAADPRFHL-VVPTRADSREALIARDGLTLAELPEG 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTS+ RR + L R D+ ++ RG I+TR+ K+ + + A++LAYAG+ R+ + Sbjct: 115 AKVGTSAPRRISQLKAIRPDLEILPLRGNIDTRMGKVTSGELDAVMLAYAGLTRVGMQDR 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E+ + + P+P QGA+ IE ++ + + ++ H DT+ S ER L L+ C Sbjct: 175 ATEVFDADIIMPAPAQGALAIECRADDTETVRALNMLMHADTFVSAVAERTVLNRLEAGC 234 Query: 245 KSAIAGFAYCK---GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 + +A A G T+ V A DG S G+ +G AQ + Sbjct: 235 TAPVAAHATLDGYSGDTMTLTAGVYALDGSDQLVFSAEGDGARPEELGELVAQQLIDAGA 294 Query: 302 KNVF 305 N+ Sbjct: 295 ANLL 298 >gi|19551663|ref|NP_599665.1| porphobilinogen deaminase [Corynebacterium glutamicum ATCC 13032] gi|62389318|ref|YP_224720.1| porphobilinogen deaminase [Corynebacterium glutamicum ATCC 13032] gi|25453022|sp|Q8NT90|HEM3_CORGL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|21323183|dbj|BAB97811.1| Porphobilinogen deaminase [Corynebacterium glutamicum ATCC 13032] gi|41324652|emb|CAF19134.1| PORPHOBILINOGEN DEAMINASE [Corynebacterium glutamicum ATCC 13032] Length = 302 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 89/304 (29%), Positives = 142/304 (46%), Gaps = 10/304 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IGTR S LA A R L + + ++T GD + + IG G+F Sbjct: 2 TLKIGTRGSKLATTQAGTIRDQLKHY----GRDAELHIVTTPGDVNMS-PVERIG-VGVF 55 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+ + L SGE D AVHS KD+PT + R D R+ I+ +L +L Sbjct: 56 TQALRDVLHSGECDVAVHSMKDLPTATDPRFHL-VVPTRADSREALIARDGLTLAELPEG 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTS+ RR + L R D+ ++ RG I+TR+ K+ + + A++LAYAG+ R+ + Sbjct: 115 AKVGTSAPRRISQLKAIRPDLEILPLRGNIDTRMGKVTSGELDAVMLAYAGLTRVGMQDR 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E+ + + P+P QGA+ IE ++ + + ++ H DT+ S ER L L+ C Sbjct: 175 ATEVFDADIIMPAPAQGALAIECRADDTETVRALNMLMHADTFVSAVAERTVLNRLEAGC 234 Query: 245 KSAIAGFAYCK---GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 + +A A G T+ V A DG S G+ +G AQ + Sbjct: 235 TAPVAAHATLDGYSGDTMTLTAGVYALDGSDQLVFSAEGDGARPEELGELVAQQLIDAGA 294 Query: 302 KNVF 305 N+ Sbjct: 295 ANLL 298 >gi|147920614|ref|YP_685587.1| porphobilinogen deaminase [uncultured methanogenic archaeon RC-I] gi|121683115|sp|Q0W5T2|HEM3_UNCMA RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|110620983|emb|CAJ36261.1| porphobilinogen deaminase [uncultured methanogenic archaeon RC-I] Length = 303 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 103/299 (34%), Positives = 144/299 (48%), Gaps = 6/299 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LALA A + R L + I + T GD + L + G G F Sbjct: 1 MRIGTRGSKLALAQAEKVRRLLKEQ----GVEATITVIKTSGDVQKDSPLYMMKGYGAFV 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EI+ L+ E+D AVHS KD+PT + L +A L RE DV + A+ L DL + Sbjct: 57 REIDDLLLKNEVDLAVHSLKDIPTVRPENLVTAAVLKRESALDVAVIRNAERLADLPEGA 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSS RR A++ R + D RG ++TRL KL + + AILLA AG+ RL + + Sbjct: 117 VVGTSSTRRAAMIYRHYPGLVTKDIRGNVDTRLRKLRDGEYDAILLAEAGLIRLGLDLKV 176 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ +F P+ QG I I P+A E+VK +N E TW ER A LDG C Sbjct: 177 -ERLDPYNFVPAANQGVIAIVARQGTPEA-EVVKELNDETTWIETRVERIIAAGLDGGCV 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + +A G + G VL+ DG+ V + ++ + + Sbjct: 235 VPMGVYATRVGDEIDVIGEVLSLDGRQQVRVRETIPVAGCEEHAKQVSEKLVLAGGLKL 293 >gi|167761211|ref|ZP_02433338.1| hypothetical protein CLOSCI_03616 [Clostridium scindens ATCC 35704] gi|167660877|gb|EDS05007.1| hypothetical protein CLOSCI_03616 [Clostridium scindens ATCC 35704] Length = 803 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 91/293 (31%), Positives = 146/293 (49%), Gaps = 7/293 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +G+R S LA+ + + H P + ++ + T GD+ + TL +IGG Sbjct: 1 MS-RKIVVGSRESRLAIIQTEKVMEHIRRSH--PKIELEMMTMETTGDKRLDVTLDQIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E++K L+ G ID AVHS KDMP K + I Y PRED+RDV + + +++ Sbjct: 58 KGLFVKELDKALLDGRIDLAVHSLKDMPMDESKVIPIVRYSPREDVRDVLVLP--KGVEE 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 +IG SS RR+ R + RG + TRL KL+ + A++LA AG+KRL Sbjct: 116 WDGRGIIGCSSFRRRIQAKRLFKEAEFRSVRGNVITRLEKLDRGEYDALILAAAGLKRLG 175 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I + ++ P+ GQG + ++ + ++ ++ ERAF+ L Sbjct: 176 LEYRISRYFSTDEILPAAGQGTMAVQ--GRIDMNYDFLEGYGKKEDAYIAKGERAFVRYL 233 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 DG C S +A + L G+ + + S++G +A IGR+ A Sbjct: 234 DGGCSSPVAAYGEVIDGQLLMKGLYYMEETGNYAIGSKSGPVEEAEKIGRELA 286 >gi|126433281|ref|YP_001068972.1| porphobilinogen deaminase [Mycobacterium sp. JLS] gi|126233081|gb|ABN96481.1| hydroxymethylbilane synthase [Mycobacterium sp. JLS] Length = 314 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 94/316 (29%), Positives = 144/316 (45%), Gaps = 17/316 (5%) Query: 1 MEK--KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M P RIGTR S LA A R +L+ H ++ +ST+GDR + +I Sbjct: 1 MSNADTPIRIGTRASLLATTQAGTIRDALIGR----GHAAELVLISTEGDRNQG-PIADI 55 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G G+FT + + + G +D AVHS KD+PT + I A RED RD ++ L Sbjct: 56 G-VGVFTAALREAIHDGRVDAAVHSYKDLPTAADERFTIPAIPRREDPRDALVARDGLVL 114 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L S +GTSS RR A L + + RG ++TRLN++ N + I++A AG+ R Sbjct: 115 GELPAGSTVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVGNGELDGIVVARAGLAR 174 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + + E L P+P QGA+ +E + L+ ++ DT +V ER LA Sbjct: 175 IGRLGDVTETLEPVQMLPAPAQGALAVECRAGDTGLIALLAELDDADTRAAVTAERVLLA 234 Query: 239 ELDGSCKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 EL+ C + + A + G V A DG S G A ++G Sbjct: 235 ELEAGCSAPVGAIAEVVESIDEDGRVFEEVSLRGCVAALDGSDVIRASGIGTPGRAADLG 294 Query: 290 RDAAQYIRFISNKNVF 305 A + + + + Sbjct: 295 VSVAAELFELGARELI 310 >gi|11498841|ref|NP_070070.1| porphobilinogen deaminase [Archaeoglobus fulgidus DSM 4304] gi|6225498|sp|O29026|HEM3_ARCFU RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|2649337|gb|AAB90000.1| porphobilinogen deaminase (hemC) [Archaeoglobus fulgidus DSM 4304] Length = 289 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 13/296 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +GTR S LALA + L + + + I + T GD + ++ L E G G F Sbjct: 2 KLIVGTRGSKLALAQTNKVAERLKERY-----EVEIRIVKTAGDIMKDKPLYEFKGMGAF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 ++ L G++D AVHS KD+P++ ++G ++A + R+ DV IS +L++L Sbjct: 57 VRALDTALAEGKVDVAVHSFKDVPSQRVEGTVVAAVIERDSPCDVLISRDGSTLEELDEG 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A L R R D+ + RG ++TRL KL AI++A AG+KRL ++ Sbjct: 117 AVVGTSSLRRRAQLSRLRGDLRFENLRGNLDTRLRKLREGNYDAIVVAEAGLKRLGLDRE 176 Query: 185 -IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + E P QG I I T ++LV +N E TW ERA + EL Sbjct: 177 VEYQPFPPEVIVPPANQGIIAIAT---RKGEEDLVAFLNDEKTWLEAMVERAVIKELGVG 233 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 C + +A + S + +L K + V ++ A+ + + +R Sbjct: 234 CAVPVGVYAEAQ-SRVRLICEILD---KKYLRVEEKLSKDTAVEEAAEIGKDLRKE 285 >gi|241762462|ref|ZP_04760539.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241372964|gb|EER62631.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 308 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 106/300 (35%), Positives = 153/300 (51%), Gaps = 7/300 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 PFR+G+R SPLAL A S+L H +VI+P+ T GD+ ++ L +IGGK L+ Sbjct: 4 PFRLGSRGSPLALIQARSVASALCAAHSWSEDAVVIVPIRTSGDKNRHQALADIGGKALW 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E++ L +G+ID AVHS KD+ T + I+A LPRED+ D I + + L Sbjct: 64 TKELDIALTTGQIDAAVHSMKDVETFRPSHISIAAMLPREDVHDRLIGIPSLEV--LPYS 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +GT+S RR A + R DI + RG I+TRL KL N + A LLA AG+ RL + V Sbjct: 122 GCVGTASPRRAAQIRCIRPDIEIKLLRGNIDTRLEKLANKQFDATLLAAAGLIRLGRNDV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + ++ P+ GQGAI IE + A E V +I+H T +V ER L L+ C Sbjct: 182 GYD-VPLDQMLPAAGQGAIGIEAL-ADSAAWEKVSIIDHYPTHLAVQSERQLLLRLNADC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 S IA FA + + +GK S + + + + S V Sbjct: 240 HSPIAVFAEILEKNIRLRACLYTENGK--FSASIDKEISQPSD-AFEVGSLLLNQSPPEV 296 >gi|310794330|gb|EFQ29791.1| porphobilinogen deaminase [Glomerella graminicola M1.001] Length = 347 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 102/317 (32%), Positives = 145/317 (45%), Gaps = 18/317 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LA+ A L P + I + T GD+ L GGKGL+T Sbjct: 13 IHVGTRKSALAMKQAEIVVEGLSKAR--PDVSFEIHGMQTLGDKDQITALYNFGGKGLWT 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-------HTAQSL 118 E+E KL + EID VHS KDMPT L G + RED RDV + H ++L Sbjct: 71 SELEAKLAAKEIDIIVHSLKDMPTTLPDGCTLGCVTKREDPRDVVVFKAGLAEKHGWKTL 130 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176 DL SVIGTSS+RR A L R + D RG IETRL K ++ AI+LA AG+ Sbjct: 131 ADLPEGSVIGTSSVRRIAQLKRRYPGLKFADVRGNIETRLRKCDDPEGPFSAIILAAAGL 190 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R+ I + L E+ + GQGA+ IE + + ++K + + T + ER Sbjct: 191 LRMDYGARISQFLESENSGTLHAVGQGALGIEARTGDERVLAVIKELEDKPTMLACFAER 250 Query: 235 AFLAELDGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIG 289 + + L+G C I G L V+ +DG + V +A + G Sbjct: 251 SVMRTLEGGCSVPIGVETTWVEDGKKLRLKATVVHADGTRGVDTEMVEVITTAEEADDFG 310 Query: 290 RDAAQYIRFISNKNVFN 306 + AQ + + + + Sbjct: 311 KVVAQALVDRGAQQILD 327 >gi|255526355|ref|ZP_05393269.1| porphobilinogen deaminase [Clostridium carboxidivorans P7] gi|255509932|gb|EET86258.1| porphobilinogen deaminase [Clostridium carboxidivorans P7] Length = 290 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 98/294 (33%), Positives = 153/294 (52%), Gaps = 6/294 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +I TR S LA L + H + + T GD+I + +L++IGGKGLF Sbjct: 2 KLKIATRRSQLAQVQTETIMKILKENHN---VEAEKLLVETTGDKILDVSLSKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE L+ + D AVHS KD+P + I + PRED+RD F+S K+L Sbjct: 59 IKEIEVALLEDKADAAVHSMKDVPFDVPDMFDIVSIPPREDVRDAFVSMNGVHFKELKKG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGTSS RR A + R D+ ++ RG ++TR++K+ I+LA AG+KR+ E + Sbjct: 119 AKIGTSSNRRAAQVKLLRPDLEIVPIRGNVQTRISKIEKENLDGIILAAAGLKRMNMENI 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + ++ + P+ GQGA+ IET N +++ K + E+T V ER+F+ L+G C Sbjct: 179 ITDYFDVNEMVPAVGQGALGIETK-KNSVNEDIFKKMEDENTRICVEAERSFMRTLNGDC 237 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 S I +A +T+ G + G + GN+ D + +G A+ I Sbjct: 238 HSTIGAYAQINENTISIIG-IFQV-GDNLIKRDIAGNKEDYMELGYKLAKKIIE 289 >gi|29831283|ref|NP_825917.1| porphobilinogen deaminase [Streptomyces avermitilis MA-4680] gi|39931482|sp|Q82E76|HEM31_STRAW RecName: Full=Porphobilinogen deaminase 1; Short=PBG 1; AltName: Full=Hydroxymethylbilane synthase 1; Short=HMBS 1; AltName: Full=Pre-uroporphyrinogen synthase 1 gi|29608398|dbj|BAC72452.1| putative porphobilinogen deaminase [Streptomyces avermitilis MA-4680] Length = 324 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 85/322 (26%), Positives = 151/322 (46%), Gaps = 22/322 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ R+GTR S LA+A + + ++ V P + ++ ++T GD L +IGG Sbjct: 1 MSEQALRLGTRRSKLAMAQSGQVADAVRQVTGRP---VELVEITTYGDTSR-EHLAQIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + L+ GE+D AVHS KD+PT L ++A RED RDV ++ + ++ Sbjct: 57 TGVFVTALRDALLRGEVDFAVHSLKDLPTAQPDELALAAVPVREDPRDVLVARDGLTFEE 116 Query: 121 -----LALHSVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILL 171 + +GT S RR A L + + RG +++R+ + + + ++L Sbjct: 117 LGAPSPKGTARVGTGSPRRMAQLNAYARSHGLAVETVPIRGNVDSRIGYVRSGELDGVVL 176 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ R+ + + E L ++ P+PGQGA+ IE +N + ++ T +V Sbjct: 177 AAAGLHRIGRIDEVTEFLPVDTVLPAPGQGALAIECAADNADLIAALAELDDPFTRAAVT 236 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---- 282 ER+ LA L+ C + + A + G+V +DG ++S G Sbjct: 237 AERSLLAALEAGCSAPVGALADLLADGQIVTEMRLRGVVGTTDGSTLVQLSTTGPVPETH 296 Query: 283 CDAINIGRDAAQYIRFISNKNV 304 A+ +GR+ A + + Sbjct: 297 DQAMALGRELAAEMLAKGAAGL 318 >gi|302511047|ref|XP_003017475.1| porphobilinogen deaminase Hem3, putative [Arthroderma benhamiae CBS 112371] gi|291181046|gb|EFE36830.1| porphobilinogen deaminase Hem3, putative [Arthroderma benhamiae CBS 112371] Length = 331 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 96/320 (30%), Positives = 150/320 (46%), Gaps = 18/320 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K F IGTR S LA+ R +L+ + P + GD L E K Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRDALVA--RWPDCEFNVHTRDAAGDLNKVTPLREFTSKN 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK--- 119 L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPEACTLSAIMKREDPRDALVVKKGQPKMTLA 122 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177 +L SV+GTSS+RR A L R + VID RG I+TRL KL+ + I+LA AG+ Sbjct: 123 ELPAGSVVGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER Sbjct: 183 RSGHGDRIAQYLDSKNGKMLHAVGQGALGVEIRADDEKMAEMLREIGDQKTTFACLAERN 242 Query: 236 FLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 L L+G C + + G L IV + DGK E+ ++ + A Sbjct: 243 LLRTLEGGCSAPLGVETEWVPNASGNGEMLRLRCIVTSIDGKEAVEIEKDCHVQAPEQAE 302 Query: 287 NIGRDAAQYIRFISNKNVFN 306 G+ A + + Sbjct: 303 EFGKAVADEMVEKGAGKILE 322 >gi|119587854|gb|EAW67450.1| hydroxymethylbilane synthase, isoform CRA_d [Homo sapiens] Length = 321 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 94/338 (27%), Positives = 138/338 (40%), Gaps = 75/338 (22%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA ++L + P II +ST GD+I + L++IG K Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177 + L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++ Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQ 194 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + +IL+ E+ + GQ Sbjct: 195 RMGWHNRVGQILHPEECMYAVGQ------------------------------------- 217 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-- 284 +G C +A K LY G V + DG + + +G D Sbjct: 218 ---EGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQ 274 Query: 285 ----------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 275 LVGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 312 >gi|115399989|ref|XP_001215583.1| porphobilinogen deaminase [Aspergillus terreus NIH2624] gi|114191249|gb|EAU32949.1| porphobilinogen deaminase [Aspergillus terreus NIH2624] Length = 337 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 100/319 (31%), Positives = 150/319 (47%), Gaps = 19/319 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA+ A R SL V P + I+ L T GDR L G K L+ Sbjct: 11 PLRIGTRRSNLAMVQAEGIRDSLQKV--APDRSYEIVALRTLGDRDKQTALYNFGAKNLW 68 Query: 65 TEEIEKKLISGEIDCAVHSA------KDMPTKLLKGLQISAYLPREDIRDVFISH---TA 115 T E+E+KL SGE+D VH DMPT L Q++A PR+D RD I Sbjct: 69 TTELEEKLTSGELDVIVHCLKDQLTAPDMPTTLPDTCQLAAIPPRDDPRDALIVKASLPY 128 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAY 173 SL+ L +V+GTSS+RR A L R + + RG +ETRL K+++ ++ ++++ Sbjct: 129 TSLQSLPAGAVVGTSSVRRSAQLRRLYPHLRFANLRGNVETRLAKVDDPESEYTCMIMSA 188 Query: 174 AGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 AG++R+ + I + L D + GQGA+ +E + + EL+ + + + Sbjct: 189 AGLERVGLQYRINQYLGSRDGGILHAVGQGALGLEIRKGDAQMLELLGQLADRKSTLACL 248 Query: 232 CERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRN---GNRCDAIN 287 ER+ + L+G C I L + IV++ DG E S G +A Sbjct: 249 AERSLMKTLEGGCSVPIGVETEWLSSGDLRMHSIVVSLDGTQCVEDSITSKVGTDDEAAA 308 Query: 288 IGRDAAQYIRFISNKNVFN 306 G + A + + N Sbjct: 309 FGEELAARLVKAGAGQILN 327 >gi|284034243|ref|YP_003384174.1| porphobilinogen deaminase [Kribbella flavida DSM 17836] gi|283813536|gb|ADB35375.1| porphobilinogen deaminase [Kribbella flavida DSM 17836] Length = 294 Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats. Identities = 94/298 (31%), Positives = 147/298 (49%), Gaps = 10/298 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++GTR S LA A A +L ++ H + ++P+ T GD L +IGG G+F Sbjct: 2 IKLGTRRSALATAQAALVADALRNL----GHEVDLVPIVTTGDVNR-APLEQIGGTGVFV 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + L++GEID AVHS KD+PT + GL + A RED RDV ++ +L +L + Sbjct: 57 SALRDALLAGEIDIAVHSLKDLPTAPVDGLTLGAIPVREDPRDVLVARDGLTLGELQTGA 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GT S RR A L + + RG ++TR+ + + K A++LA AG+ RL + I Sbjct: 117 LVGTGSPRRVAQLEALGLGLELTGIRGNVDTRIAMVADGKVDAVVLARAGLARLGRLAEI 176 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ P+PGQGA+ IE ++ + ++ T +V ER LA L+ C Sbjct: 177 TETLDPIQMLPAPGQGALGIECRSDDTAVLAALAPLDDPGTRAAVTAERQLLATLEAGCT 236 Query: 246 SAIAGFAYCKGS----TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + + A L+ G + DG +S NG+ D +GR A + Sbjct: 237 APVGALAEVVDGEDGPELWLRGALG-EDGGGVRRLSANGSVDDPAAVGRALANELLEQ 293 >gi|328474912|gb|EGF45712.1| porphobilinogen deaminase [Listeria monocytogenes 220] Length = 288 Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats. Identities = 107/285 (37%), Positives = 156/285 (54%), Gaps = 7/285 (2%) Query: 24 RSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHS 83 + L + + P + I + TKGDRI + TL+++GGKGLF E+E+ L ID AVHS Sbjct: 2 INKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGKGLFVSEVEQALSDEVIDFAVHS 59 Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS 143 KD+P+ L +GL I A RE D F+ + SL +L SVIGTSSLRR A LL+ R Sbjct: 60 MKDVPSSLKEGLIIGAIPKRESPLDCFVFNRVNSLDELPQGSVIGTSSLRRAAQLLKHRP 119 Query: 144 DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK---EKVIKEILNIEDFPPSPGQ 200 D + RG I+TRL KL+ AI+LA AG+ R+ + E + E P+ GQ Sbjct: 120 DFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWLENTTLKLEDIPPELCLPAVGQ 179 Query: 201 GAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY 260 GA+ IE ++ + ++++ I+HE+T V ER FL +L+G C+ IAGFA ++ Sbjct: 180 GALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKKLNGGCEIPIAGFATRANEVVH 239 Query: 261 FYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 F G+V +DG I + G + IG A+ + + Sbjct: 240 FKGLVGNADGSIILASEQAG--ANPSEIGNKVAEDLLSEGADTII 282 >gi|302662015|ref|XP_003022667.1| porphobilinogen deaminase Hem3, putative [Trichophyton verrucosum HKI 0517] gi|291186626|gb|EFE42049.1| porphobilinogen deaminase Hem3, putative [Trichophyton verrucosum HKI 0517] Length = 331 Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats. Identities = 96/320 (30%), Positives = 150/320 (46%), Gaps = 18/320 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K F IGTR S LA+ R +L+ + P + GD L E K Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRDALVA--RWPDCEFNVHTRDAAGDLNKVTPLREFTSKN 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK--- 119 L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPEACTLSAIMKREDPRDALVVKKGQPKMTLA 122 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177 +L SV+GTSS+RR A L R + VID RG I+TRL KL+ + I+LA AG+ Sbjct: 123 ELPAGSVVGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER Sbjct: 183 RSGHGDRIAQYLDSKNGKMLHAVGQGALGVEIRADDEKMAEMLREIGDQKTTFACLAERN 242 Query: 236 FLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 L L+G C + + G L IV + DGK E+ ++ + A Sbjct: 243 LLRTLEGGCSAPLGVETEWVPDASGNGEMLRLRCIVTSIDGKEAVEIEKDCHVQAPEQAE 302 Query: 287 NIGRDAAQYIRFISNKNVFN 306 G+ A + + Sbjct: 303 EFGKAVADEMVEKGAGKILE 322 >gi|332363838|gb|EGJ41617.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK355] Length = 306 Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats. Identities = 110/303 (36%), Positives = 163/303 (53%), Gaps = 9/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA-QSLKDL 121 +F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I + Q+L DL Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQSGQTLADL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 119 PEGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 ++ + L P+ QGA+ +E + + + L+ + E T V ERA LA Sbjct: 179 LDQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLA 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +++ C IA FA G ++ DG+ VS G D + A + + Sbjct: 239 QMNADCTFPIAAFAQKNGQNYQLEAMLAKEDGQCIF-VSLQG--QDGQELAEQAVRQLAD 295 Query: 299 ISN 301 Sbjct: 296 KGA 298 >gi|148259148|ref|YP_001233275.1| porphobilinogen deaminase [Acidiphilium cryptum JF-5] gi|146400829|gb|ABQ29356.1| porphobilinogen deaminase [Acidiphilium cryptum JF-5] Length = 333 Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 108/312 (34%), Positives = 156/312 (50%), Gaps = 11/312 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMD---VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 P R+GTR SPLAL ++L + P +ST GDR+T+R L EIGGK Sbjct: 20 PLRVGTRGSPLALRQTDMFLAALREICPALGFAPDAFAPEIISTTGDRVTDRPLAEIGGK 79 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-------SHT 114 GLF +EI + L+ G ID AVHS KD+ T L G+ ++ + RED RD I + Sbjct: 80 GLFAKEIHEALLDGRIDFAVHSLKDLETALPDGIILACTMKREDARDALILADGLGPVND 139 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 L + +GTSS+RR+A LL R D+ + RG + TRL+ A LLA A Sbjct: 140 GDIWSSLPKGARVGTSSVRRQAQLLHARPDLQIGLLRGNVRTRLDAARIGTFDATLLALA 199 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G++RL E+ + ++ E P+ QG + I + + EL+ I + + ER Sbjct: 200 GLRRLGFEEEVAAAIDPEAMVPAACQGIVGITVRAADSRLAELLAAIENHEAKAVSKAER 259 Query: 235 AFLAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 A LA LDGSC++ I G A L+ G+ DG + S N DA+ +G + Sbjct: 260 ALLAALDGSCRTPIGGHARLLPDGNLHLTGLTARPDGSFLLKRSEVANAADAVRLGAELG 319 Query: 294 QYIRFISNKNVF 305 +R S ++F Sbjct: 320 ASLRRDSPADIF 331 >gi|227502550|ref|ZP_03932599.1| porphobilinogen deaminase [Corynebacterium accolens ATCC 49725] gi|227076712|gb|EEI14675.1| porphobilinogen deaminase [Corynebacterium accolens ATCC 49725] Length = 295 Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 91/298 (30%), Positives = 143/298 (47%), Gaps = 8/298 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LA A R L+D + + ++T GD + IG G+FT+ Sbjct: 4 IGTRGSKLATTQAGHVRDWLIDA----GFDSELHIVTTAGDTNM-APVERIG-VGVFTQA 57 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 + + L GE D AVHS KD+PT ++ R+D R+V ++ +L L + + Sbjct: 58 LREALCRGECDIAVHSFKDLPTAEDDRFRL-VIPQRQDSREVLVARDGMTLMQLPEGARV 116 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTS+ RR + L R D+ + RG I+TR++K+ + + A++LAYAG+ R E + Sbjct: 117 GTSAPRRISQLAALRPDLEIRPLRGNIDTRMSKVTDGELDAVVLAYAGLLRGGYEDRASD 176 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 I + E F P+P QGA+ IE A L V++ E + ERA LA L+ C + Sbjct: 177 IFDPELFMPAPAQGALAIEAVAGTEAAAALDAVVD-EQATAAALAERAVLARLEAGCTAP 235 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A + G L G V A DG + +G +A +G + + ++ Sbjct: 236 VAATSRWNGDQLTVRGGVFALDGSRQLTATASGTAAEAAELGARVSDELFAQGAADLL 293 >gi|160879927|ref|YP_001558895.1| porphobilinogen deaminase [Clostridium phytofermentans ISDg] gi|160428593|gb|ABX42156.1| porphobilinogen deaminase [Clostridium phytofermentans ISDg] Length = 301 Score = 205 bits (520), Expect = 9e-51, Method: Composition-based stats. Identities = 89/305 (29%), Positives = 144/305 (47%), Gaps = 8/305 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+K+ +G+R S LA+ + P + ++ L T GD I +++L +IGG Sbjct: 1 MKKQKIVVGSRDSKLAVMQTELIMHEI--NRNNPEIELELVTLKTTGDLILDQSLDKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E++ L+ G ID AVHS KDMP + K L I A R D RDV + + Sbjct: 59 KGLFVKELDLALLDGRIDIAVHSLKDMPMEENKELPIVALPKRGDARDVLVLPKGCEFIE 118 Query: 121 LA----LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 + IG+SS RRK + + RG + TRL+KL+ + +++LA AG+ Sbjct: 119 YEDMNLYYQNIGSSSARRKLQIQKLLPSAGTSGVRGNVITRLDKLDRGEYTSLILAAAGL 178 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 +R+ I ++E+ P+ GQG + I+ + ++ I +T + ER+F Sbjct: 179 QRVGLPHRISHYFSVEEMIPAAGQGILSIQA--RRDLNVDFLENIKDANTTYASLAERSF 236 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + LDG C S IA +A +G L G+ + ++ A +G A + Sbjct: 237 VRTLDGGCSSPIAAYAAVEGEELKLVGLYYNEKTTEHRVATVVDHKERAERVGEQLALRL 296 Query: 297 RFISN 301 R Sbjct: 297 RGEIG 301 >gi|260941880|ref|XP_002615106.1| hypothetical protein CLUG_05121 [Clavispora lusitaniae ATCC 42720] gi|238851529|gb|EEQ40993.1| hypothetical protein CLUG_05121 [Clavispora lusitaniae ATCC 42720] Length = 356 Score = 205 bits (520), Expect = 9e-51, Method: Composition-based stats. Identities = 96/319 (30%), Positives = 158/319 (49%), Gaps = 17/319 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +IG R S LA+ + ++ + P + I+ L+T GD++ N+ L GGK Sbjct: 13 NNHVQIGGRKSRLAVVQSEFVKAGIEA--NFPELSCSILALNTLGDKVQNKPLYSFGGKS 70 Query: 63 LFTEEIEKKLISG-----EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---T 114 L+T+E+E L+ ++D VHS KDMPT L ++ + RED RD + Sbjct: 71 LWTKELEILLLEAVGDYPQLDMIVHSLKDMPTNLPDEFELGCIVEREDPRDALVVKKGLP 130 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLA 172 +SL DL +V+GTSS+RR A LL+ + D RG I TRL+KL++ + ++LA Sbjct: 131 FRSLSDLPPGAVVGTSSIRRSAQLLKNYPHLRFEDMRGNIATRLSKLDDPSSPFTCLILA 190 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 +G+ RL I L+ D + GQGA+ IE ++ +++ + H + Sbjct: 191 ASGLLRLGLGDRISAPLDAPDMYYAVGQGALGIEIRKDDTVMLSVLRKLEHLPSAYCCYA 250 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNG---NRCDAIN 287 ERA + L+G C + + T LYF GI+++ DGK E N+ +A Sbjct: 251 ERAMMRMLEGGCSVPLGVKTHYNEQTQQLYFKGIIVSPDGKQSVEAEHTSIIYNKAEAEA 310 Query: 288 IGRDAAQYIRFISNKNVFN 306 +G + A+ + + K + + Sbjct: 311 VGEEVARKLTHLGGKKILD 329 >gi|325693629|gb|EGD35548.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK150] Length = 306 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 107/303 (35%), Positives = 161/303 (53%), Gaps = 9/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121 +F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 119 PEGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 ++ + L P+ QGA+ +E + + ++L+ + E T V ERA LA Sbjct: 179 LDQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDEKTAAEVAVERAVLA 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +++ C IA FA G ++ DG+ + D + A + + Sbjct: 239 QMNADCTFPIAAFAQKNGQDYQLEAMLAKEDGQCVF---VSFQGQDGQELAEQAVRQLAD 295 Query: 299 ISN 301 Sbjct: 296 KGA 298 >gi|329848284|ref|ZP_08263312.1| porphobilinogen deaminase [Asticcacaulis biprosthecum C19] gi|328843347|gb|EGF92916.1| porphobilinogen deaminase [Asticcacaulis biprosthecum C19] Length = 311 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 101/307 (32%), Positives = 155/307 (50%), Gaps = 8/307 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIP----PHNIVIIPLSTKGDRITNRTLTEIGGK 61 +IGTR S LAL + ++ + ++T+GDRI +R L E GGK Sbjct: 4 LKIGTRGSKLALTQCGWVQRRIVAALGEDVARADEVAPLTVITTQGDRIQDRRLIEAGGK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 LFT+EIE L+ G+ID AVHS KDMP + GL + A RED RD F+S ++L DL Sbjct: 64 ALFTKEIEDALLRGDIDVAVHSLKDMPAADVPGLSLCAIPVREDPRDAFLSPNYETLADL 123 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GT+S+RR+A L R D+ VI RG ++TRL KL A+LLA AG+ RL Sbjct: 124 PQGARLGTASMRRQAQALAQRPDLQVIMTRGNVDTRLAKLQAGACDALLLAAAGLNRLGL 183 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I+ ++ + F +PGQGA+ I+ + ++ T+ + ER L L+ Sbjct: 184 SHHIRSHIDPDLFASAPGQGALAIQCR-TEDLGAGWMAKVHDVTTFLRIQAERGALEALE 242 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFH--EVSRNGNRCD-AINIGRDAAQYIRF 298 SC++A+ +A + L + L++DG S + A ++G I+ Sbjct: 243 ASCRTAVGAYATLENDQLALFVEALSADGSKRWQRRESLSAPTAQSARDLGLKLGHEIKT 302 Query: 299 ISNKNVF 305 + + Sbjct: 303 EAGPELI 309 >gi|119587853|gb|EAW67449.1| hydroxymethylbilane synthase, isoform CRA_c [Homo sapiens] Length = 304 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 94/337 (27%), Positives = 137/337 (40%), Gaps = 75/337 (22%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LA ++L + P II +ST GD+I + L++IG K Sbjct: 1 MRVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEKS 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLK 119 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L+ Sbjct: 59 LFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLE 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKR 178 L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++R Sbjct: 119 TLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + +IL+ E+ + GQ Sbjct: 179 MGWHNRVGQILHPEECMYAVGQ-------------------------------------- 200 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD--- 284 +G C +A K LY G V + DG + + +G D Sbjct: 201 --EGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQL 258 Query: 285 ---------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 259 VGITARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 295 >gi|166033239|ref|ZP_02236068.1| hypothetical protein DORFOR_02964 [Dorea formicigenerans ATCC 27755] gi|166027596|gb|EDR46353.1| hypothetical protein DORFOR_02964 [Dorea formicigenerans ATCC 27755] Length = 310 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 98/304 (32%), Positives = 147/304 (48%), Gaps = 13/304 (4%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 R+GTR S LALA + L P ++ + T GD L +IG KG+F + Sbjct: 4 RVGTRGSKLALAQTKQVIEKLKSA--FPEDEFDVVIIKTTGDMDQKSRLDQIGSKGIFVK 61 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE++L+ +I AVHS KDMP GL + RED RDV I A S+ DL +V Sbjct: 62 EIEEELLEEKIHLAVHSMKDMPDTTADGLIFAKAWKREDPRDVLILREAVSVDDLPKGAV 121 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGT S RRK LL+ R D++++ RG ++TR+ K+ + I+LA AGI RL +E+ I Sbjct: 122 IGTGSKRRKYQLLKIRPDLNIVGIRGNVDTRIRKMQEEEMDGIVLAVAGINRLGREQEIT 181 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L + P+P QG + +E +N + + ++ ++T V ER FL ++ GSC Sbjct: 182 CYLEPDQMIPAPAQGTLALEVKADNIQLIRKLNRLSDQETDICVKAERQFLKQIGGSCHL 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG----NRCDA-------INIGRDAAQY 295 + + + L + DGK D+ I R+A + Sbjct: 242 PVGAYCKIQDEKLVLRAMFGTEDGKKMAYTKVESAVLNKIEDSSQIDEICRQIAREAVEK 301 Query: 296 IRFI 299 I+ Sbjct: 302 IQMQ 305 >gi|257465835|ref|ZP_05630146.1| porphobilinogen deaminase [Fusobacterium gonidiaformans ATCC 25563] gi|315916992|ref|ZP_07913232.1| porphobilinogen deaminase [Fusobacterium gonidiaformans ATCC 25563] gi|313690867|gb|EFS27702.1| porphobilinogen deaminase [Fusobacterium gonidiaformans ATCC 25563] Length = 299 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 107/301 (35%), Positives = 163/301 (54%), Gaps = 6/301 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL--TEI 58 M K+ +G+R S LALA + L H P + I + T+GD+ + ++ Sbjct: 1 MSKQQIILGSRGSILALAQTNWVKEQLEKYH--PELSFSIQIIETQGDKDLHSHFGNSQS 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 K FT+EIEK L+ GEID AVHS KD+P+ GL A RED+RDV IS + + L Sbjct: 59 SLKSFFTKEIEKSLLEGEIDIAVHSMKDVPSVSPAGLICGAIPIREDVRDVLISRSGKPL 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L ++IGTSSLRR + + R D+ + RG I TRL KL + AI+LA AG+KR Sbjct: 119 AELPQGAIIGTSSLRRIQNIKKIRPDLEIKALRGNIHTRLRKLEEEQYDAIILAAAGLKR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 +K E+ I E L+ FPP+P QGA+ I+ + + Q++++ I++E+ + ER F Sbjct: 179 VKLEEKITEYLDPTIFPPAPAQGALYIQCREKDTEVQKILQSIHNENLEKVLVVEREFSK 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 DG C + + ++ +G TL F+ + + ++ N +I R AAQ I Sbjct: 239 IFDGGCHTPMGCYSNLQGDTLEFFAMYSHEN--KRYQTKVVENLSKGKDIARMAAQEIEK 296 Query: 299 I 299 + Sbjct: 297 M 297 >gi|225569053|ref|ZP_03778078.1| hypothetical protein CLOHYLEM_05132 [Clostridium hylemonae DSM 15053] gi|225161852|gb|EEG74471.1| hypothetical protein CLOHYLEM_05132 [Clostridium hylemonae DSM 15053] Length = 298 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 96/299 (32%), Positives = 145/299 (48%), Gaps = 8/299 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ RIG+R S LA+ A + ++ P I+ + T+GD+I +R L GG Sbjct: 1 MQS-IIRIGSRESRLAVKQAEIVKQAVER--NCPDIKAEIVTMKTEGDKILDRRLELAGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+EK L+ G ID VHS KD+P ++ + L + A+ RED RDV I Sbjct: 58 KGLFVKELEKALLDGRIDICVHSLKDVPMEVPEDLPVVAFGEREDPRDVLIYKP--GRTS 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + VIGTSS RR+ L R + RG ++TRL KL+ +LA AG+KRL Sbjct: 116 IPEGGVIGTSSRRRELQLKRLYPSCTFRSIRGNVQTRLRKLSEEGFDGTVLAAAGLKRLH 175 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E+V + ++++ P+ GQG + ++ + + ER F A L Sbjct: 176 MEEVAGRVFSVDEIIPAVGQGILAVQGRKGRDYSWLTS--FACGKSRAEAEAEREFAAAL 233 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G C S +A A +G+ L G+ G I+ +R G A +G A+ +R Sbjct: 234 GGGCTSPVAAHAQAQGAELKLTGLYYC-GGDIYRTRTRTGETDRARQLGAALAEEMRRE 291 >gi|207723608|ref|YP_002254006.1| porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase) (hmbs) (pre-uroporphyrinogen synthase) protein [Ralstonia solanacearum MolK2] gi|207742664|ref|YP_002259056.1| porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase) (hmbs) (pre-uroporphyrinogen synthase) protein [Ralstonia solanacearum IPO1609] gi|206588811|emb|CAQ35773.1| porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase) (hmbs) (pre-uroporphyrinogen synthase) protein [Ralstonia solanacearum MolK2] gi|206594058|emb|CAQ60985.1| porphobilinogen deaminase (pbg) (hydroxymethylbilanesynthase) (hmbs) (pre-uroporphyrinogen synthase) protein [Ralstonia solanacearum IPO1609] Length = 302 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 99/293 (33%), Positives = 153/293 (52%), Gaps = 6/293 (2%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + A R++L + P ++ I+ ++T+GD+I +R+L ++GGKGLF +E+E L G Sbjct: 1 MWQAEYVRAALQKYY--PACDVSILGMTTRGDQILDRSLAKVGGKGLFVKELEVALAEGR 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 D AVHS KD+P +L G + A L RED RD F+S+ L L +V+GTSSLRR+A Sbjct: 59 ADLAVHSLKDVPMELPPGFALPAILEREDPRDAFVSNQYADLAALPAGAVVGTSSLRREA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 L + + RG ++TRL KL+ AI+LA AG+KRL + I+ ++ + P Sbjct: 119 SLRARFPHLVIQPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLSERIRAVIASDVSLP 178 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + GQGA+ IET + Q + ++H T +V ERA L GSC+ +A FA+ Sbjct: 179 AAGQGALGIETRADRTDVQAWLAPLHHLPTALAVTAERAVSRRLGGSCQVPLAAFAHWTD 238 Query: 257 -STLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISNKNVF 305 L V + DG+ +A +G AQ + ++ Sbjct: 239 AGALRLRAFVASQDGRRKLAAEGEATPATLAEAEALGARVAQQMLDGGAWDIL 291 >gi|102139876|gb|ABF70029.1| porphobilinogen deaminase, chloroplast (hydroxymethylbilane synthase) (pre-uroporphyrinogen synthase), putative [Musa acuminata] Length = 328 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 111/301 (36%), Positives = 160/301 (53%), Gaps = 32/301 (10%) Query: 11 RCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 R S LALA A ETR L H + II + T GD I ++ L +IGGKGLFT+EI Sbjct: 54 RDSDLALAQARETRDKLKAAHSELAEEGAVEIIIIKTTGDMILDKPLADIGGKGLFTKEI 113 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128 + L+ G ID AVHS KD+PT L +G + LP Sbjct: 114 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLP-------------------------- 147 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188 +SLRR++ +L + V++ RG ++TRL KL N HA LLA AG+KRL + + I Sbjct: 148 -ASLRRQSQILCRYPSLKVVNLRGNVQTRLTKLKNGDVHATLLALAGLKRLNMVENVTSI 206 Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248 L++E+ P+ QGAI I N+ K E + +NHEDT +V CER FL LDG+C++ I Sbjct: 207 LSMEEMLPAVAQGAIGIACRSNDNKMMEYLSSLNHEDTRSAVACEREFLTVLDGNCRTPI 266 Query: 249 AGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNR--CDAINIGRDAAQYIRFISNKNVF 305 A +A K + F G++ + DG +E +R G D + +G+DA ++ + + Sbjct: 267 AAYAHRDKDGSCSFRGLLASPDGSKVYETTRIGPYSFDDMVEMGKDAGHELKAKAGPGFY 326 Query: 306 N 306 + Sbjct: 327 D 327 >gi|305679995|ref|ZP_07402805.1| hydroxymethylbilane synthase [Corynebacterium matruchotii ATCC 14266] gi|305660615|gb|EFM50112.1| hydroxymethylbilane synthase [Corynebacterium matruchotii ATCC 14266] Length = 298 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 88/300 (29%), Positives = 146/300 (48%), Gaps = 8/300 (2%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 IGTR S LA A R +L H P + ++T GD + IG G+FT+ Sbjct: 3 IIGTRGSLLATTQAGHVRDALTS-HGYPS---ELRIVTTTGDVNL-APVERIG-VGVFTQ 56 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 + L++GE D AVHS KD+PT + + + RE+ RD I+ +L +L +V Sbjct: 57 ALRDSLLAGECDIAVHSFKDLPTAVDERFHL-VVPHRENARDCLIARNNLTLAELPTGAV 115 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GT + RR A L R DI + RG I+TR+ K+++ + A++LAYAG+ R+ + Sbjct: 116 VGTGAPRRIAQLKALRPDIHTVPLRGNIDTRMAKVHDGELDAVVLAYAGLSRVHRADEAT 175 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E+ + +F P+P QGA+ +E ++ + I + + ER LA L+ C + Sbjct: 176 EVFDPLEFLPAPAQGALAVECRADDADTIAAITTIADPKAYACAHTERVVLARLEAGCTA 235 Query: 247 AIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A +A + + + V+A DG + G A N+G A+ + ++ Sbjct: 236 PVAAYATVAADNIMTLHAAVIAVDGSATLRATAAGPIDTAENLGMTVARALLDDGASSLL 295 >gi|167769475|ref|ZP_02441528.1| hypothetical protein ANACOL_00809 [Anaerotruncus colihominis DSM 17241] gi|167668443|gb|EDS12573.1| hypothetical protein ANACOL_00809 [Anaerotruncus colihominis DSM 17241] Length = 295 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 90/297 (30%), Positives = 144/297 (48%), Gaps = 7/297 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K ++G+R S LA+ A ++ + P + ++ + T GD+I +RTL +IGGKG Sbjct: 1 MKHLKVGSRESRLAVIQAKLAMDAVRE--WDPEIELELVAMKTTGDKILDRTLDKIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF E++ L++G +D VHS KD+P L L ++ + R D RD + D A Sbjct: 59 LFVRELDAALLNGMVDFTVHSCKDLPMDLDPRLPLAGFSKRADPRDALVLPNGVYELDPA 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 IG +S RR L + V RG ++TRL KL++ + A++LA AG+ RL E Sbjct: 119 --KPIGCASARRAVQLKKLFPGQPVAPVRGNVQTRLQKLDDGQYAALVLAAAGLVRLGLE 176 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + ++ P+ GQG + ++ + + D+ D ERAF+ LDG Sbjct: 177 DRITRYFSTDEMLPAAGQGILAVQARAG--ENASYLSAFFDRDSADCALAERAFVRRLDG 234 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 C S A +A +G TL G+ + + G + G R +G + A+ I Sbjct: 235 GCTSPTAAYATVQGETLTLRGMDVTAKGAPVF-DTILGPRSQGEALGIELAERILQK 290 >gi|167910007|ref|ZP_02497098.1| porphobilinogen deaminase [Burkholderia pseudomallei 112] Length = 278 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 101/268 (37%), Positives = 153/268 (57%), Gaps = 2/268 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKI 272 + +A A +G L+ G V +DG Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDGAR 278 >gi|146296661|ref|YP_001180432.1| porphobilinogen deaminase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|254800238|sp|A4XK06|HEM3_CALS8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|145410237|gb|ABP67241.1| hydroxymethylbilane synthase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 290 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 98/296 (33%), Positives = 149/296 (50%), Gaps = 6/296 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RIG R S L+ + +P+ TKGD ++L + G Sbjct: 1 MKKLRIGARDSKLSRIQVDIVARKIKQTL---GIECEFVPIKTKGDIDKTKSLKDFKSPG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F +EIE L+S EID AVHS KD+P ++ +I A + RED RDV +S L Sbjct: 58 VFVKEIELALLSREIDLAVHSLKDLPCEMDSNFEIVAVVEREDPRDVLVSKDGVGFYQLK 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ IGTSSLRR+ L R DI V++ RG IETRL+K+ + ++LAYA +KRL + Sbjct: 118 PNAKIGTSSLRREVHLKNLRQDIQVVNIRGNIETRLSKIESEGLDGVVLAYAALKRLNLD 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I ++ + P PGQGAICIE ++P ++ IN D + ER L L G Sbjct: 178 SHVSYIFDVNEITPCPGQGAICIECLKDSPYK-NILSKINDADAYIQTQFERLVLKFLGG 236 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C S+I F +Y + +L+ G + S G++ D +++ + ++ Sbjct: 237 GCHSSIGVFCKTDQDKIYAFASILS--GDKLIKASIEGDKDDFLSLANKLSNMLKS 290 >gi|304315023|ref|YP_003850170.1| porphobilinogen deaminase [Methanothermobacter marburgensis str. Marburg] gi|302588482|gb|ADL58857.1| porphobilinogen deaminase [Methanothermobacter marburgensis str. Marburg] Length = 289 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 94/288 (32%), Positives = 146/288 (50%), Gaps = 6/288 (2%) Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 GTR S LAL L ++ I + TKGDRI + L + +GLFT E+ Sbjct: 4 GTRGSRLALVQTDHVIDMLSEIC---GERIERRIIKTKGDRIKDSQLYSMDSRGLFTREL 60 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128 + ++ E+D AVHS KD+P+ L L I+A PRE +V +S +L + +G Sbjct: 61 DIAVLEEEVDFAVHSLKDVPSDLDPELVIAAVPPRESPNEVLVSRFD--WDELPPAAKLG 118 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188 TSSLRR+A + + + RG I+TR+ K+ + HA ++A AG+KRL E IK+ Sbjct: 119 TSSLRREAFCNHHQKNFKMEPLRGNIDTRIRKVMEGEVHATIMAEAGLKRLGLENYIKKR 178 Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248 +E F P+ GQGA+ + T + + ++ I H + V E+ L EL C+ + Sbjct: 179 FTLEYFTPAAGQGALAVITR-RDSELMVSIEKITHYPSHQEVTAEKTLLRELGAGCQCPL 237 Query: 249 AGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 A + Y ++L DG+I V+ G+ A IG+ AA+ + Sbjct: 238 GVIARASDGKINLYAVLLTRDGEILKRVNVKGSVDKAEEIGKKAAKEM 285 >gi|332877010|ref|ZP_08444763.1| hydroxymethylbilane synthase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332685118|gb|EGJ57962.1| hydroxymethylbilane synthase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 290 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 100/297 (33%), Positives = 152/297 (51%), Gaps = 8/297 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KP RIGTR S LAL A + L + + I+ + ++GD L E+G G Sbjct: 1 MKPIRIGTRDSQLALWQAETVQYQLE----LLGYPTEIVGIKSEGDLELTTPLYEMGVTG 56 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT+ ++ L+ GEID AVHS KD+PT L G+ + A L R + D+ + S D Sbjct: 57 IFTKALDIALLKGEIDIAVHSMKDVPTLLPDGIAVGAVLERGNPHDILVYKGDVSDLDSR 116 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + + I TSSLRRKA L ++ + RG + TRL KL +N + A AG++R+ + Sbjct: 117 V-ATIATSSLRRKAQWLHRYPHHTIENLRGNVNTRLQKLADNPWDGAIFAAAGLERI--D 173 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 K+ ++ L ++ P+P QGAI + H +N Q ++ I+ T+ ERAFL L+G Sbjct: 174 KLPEDYLVLDWMLPAPAQGAIMVLAHEDNVDLQGILLKIHDGKTYIETQVERAFLRALEG 233 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 C + I +A G ++F G + + DGK V+ + D G A IR Sbjct: 234 GCTAPIGAYAEFDGEQVHFKGGLWSEDGKQEALVNETFDHID-EFTGEWLASKIRDN 289 >gi|307187698|gb|EFN72670.1| Porphobilinogen deaminase [Camponotus floridanus] Length = 357 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 109/352 (30%), Positives = 165/352 (46%), Gaps = 49/352 (13%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++ R+G+R S LAL SL ++H P I+ ++TKGD+I +++L +IG K Sbjct: 6 KRDVIRVGSRKSELALIQTKHVIQSLKELH--PKKEFEIVTMNTKGDKILDKSLPKIGEK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 LFTEE+E L + ID VHS KDMPT L G+ + A L RED RD + K L Sbjct: 64 SLFTEELEIALENDRIDFVVHSLKDMPTTLPAGMALGAILKREDPRDAVVMSKKFKSKKL 123 Query: 122 ---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 S+IGTSSLRR A L R + + + RG + TRL KL+ N AI+LA AG+ Sbjct: 124 SSLPKGSIIGTSSLRRSAQLSRNMPHLKIQNIRGNLNTRLKKLDDENGSYAAIILAAAGL 183 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 KR+ E I ++L E+ + GQGA+ +E ++ + + L++ + +T CER+F Sbjct: 184 KRMGWEDRISQLLEPEEALYAIGQGALGVECRESDWEIRSLLEPLFDVETTLRCVCERSF 243 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN----------------- 279 L L G C + +A + K + L G V + DG+ + Sbjct: 244 LKTLGGGCSAPVAVSSCLKKNELTITGAVWSLDGQTLVTNTSKSKLYLPDDDGEPPRKCP 303 Query: 280 ------------GNRCD-----AINIGRDAAQYIRFISN--------KNVFN 306 G A +G+D A+ + + + N Sbjct: 304 YQEPRLYCSVIPGKVSSISLLGAELLGKDLAKNLIEKNALDVMSQARDEILN 355 >gi|167918037|ref|ZP_02505128.1| porphobilinogen deaminase [Burkholderia pseudomallei BCC215] Length = 276 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 101/266 (37%), Positives = 153/266 (57%), Gaps = 2/266 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L GSC Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSC 250 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG 270 + +A A +G L+ G V +DG Sbjct: 251 EVPLAAHAVWRGGELHLTGSVSTTDG 276 >gi|118576540|ref|YP_876283.1| porphobilinogen deaminase [Cenarchaeum symbiosum A] gi|118195061|gb|ABK77979.1| porphobilinogen deaminase [Cenarchaeum symbiosum A] Length = 311 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 92/302 (30%), Positives = 137/302 (45%), Gaps = 6/302 (1%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 +GTR S L+LA +L + + P + + T+GD +R L I KG+F + Sbjct: 5 TVGTRGSRLSLAQTGHVLDALKEAN--PEDEYKVRRIKTQGDTD-DRPLFAIDQKGIFEK 61 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EI++ + G D AVHS KD+PT+L GL ++ R DV +S L L + Sbjct: 62 EIDRAVSEGGADFAVHSLKDVPTELAPGLVLACVPRRAAANDVLVSPGGSGLGSLPRGAT 121 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSSLRR + R RSD+ V RG IETR+ K+ A++LA AGI RL + V Sbjct: 122 VGTSSLRRAVQVGRSRSDLHVKPVRGNIETRIAKVGAG-YDAVVLAEAGISRLGLD-VKY 179 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L E F PSPGQG++ + + ++ I + ERA + C+ Sbjct: 180 AALPEESFAPSPGQGSLALVARSGDAGTISMLNRIEDAASRAEAEAERALSERIGSGCRF 239 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV-F 305 + A G L + DG V +G R +G A + ++ Sbjct: 240 PVGALARSAGELLTIRAEAFSVDGSRSVSVQASGPRGSPRKVGESAGNEMLERGAGDLAL 299 Query: 306 NF 307 N+ Sbjct: 300 NW 301 >gi|228472965|ref|ZP_04057722.1| hydroxymethylbilane synthase [Capnocytophaga gingivalis ATCC 33624] gi|228275547|gb|EEK14324.1| hydroxymethylbilane synthase [Capnocytophaga gingivalis ATCC 33624] Length = 315 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 101/306 (33%), Positives = 155/306 (50%), Gaps = 13/306 (4%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK RIGTR S LAL A + ++ L + + ++P+ ++GD + L E+G Sbjct: 8 MKKTLRIGTRDSELALWQAKKVQTLLENF----GYTTSLVPVKSQGDLSLDIPLYEMGIT 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT+ ++ ++ G ID AVHS KD+PT L KG+ A L R +++DV + Sbjct: 64 GVFTKVLDVAMLQGSIDIAVHSMKDVPTSLPKGIVKGAVLTRANVQDVLVYKDGLDFLSQ 123 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + I T SLRRKA LR V + RG I TRL+KL+ + H + A A ++RL + Sbjct: 124 EQ-ATIATGSLRRKAQWLRRYPTHQVENLRGNIATRLHKLHEHSWHGAIFAAAALERLAQ 182 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + + L++E P+P QGAI ++P E + +IN ER FL L+ Sbjct: 183 DHL--QRLSLEWMTPAPAQGAILAVAMDSDPYTLEALSLINDPKADTETQIERRFLKRLE 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG---RDAAQYIRF 298 G C + I A +G TL F G + + DGK EV ++ +IG D AQ + Sbjct: 241 GGCTAPIGAKATLEGDTLSFVGNLFSLDGKQAVEVRKSIPT---HSIGSFPEDCAQELLH 297 Query: 299 ISNKNV 304 + + Sbjct: 298 SGGEGI 303 >gi|325688053|gb|EGD30072.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK72] Length = 306 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 107/303 (35%), Positives = 161/303 (53%), Gaps = 9/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121 +F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L +L Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCVLGAISQREDVRDCLIFRQAGQTLANL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 119 PQGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178 Query: 182 EKV---IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + L P+ QGA+ +E + + ++L+ + E T V+ ERA LA Sbjct: 179 MDQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDEKTAAEVSVERAVLA 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +++ C IA A ++ DG+ VS G D + A + + Sbjct: 239 QMNADCSFPIAALARKNDQDYQLEAMLAKEDGQCIF-VSLQG--QDGQELAEQAVRQLAD 295 Query: 299 ISN 301 Sbjct: 296 KGA 298 >gi|259489684|tpe|CBF90157.1| TPA: hydroxymethylbilane synthase, putative (AFU_orthologue; AFUA_5G11760) [Aspergillus nidulans FGSC A4] Length = 347 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 94/319 (29%), Positives = 145/319 (45%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K F IGTR S LAL ++L + + P + I T GD+ T L + K Sbjct: 14 SQKIFTIGTRKSKLALLQTDLVLAALKE--RFPDYTFKIHSRETAGDQNTTIALRDFTTK 71 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119 L+T+E+E L +G +D VHS KD+PT L + + RED RD + Sbjct: 72 NLWTQELEDLLEAGSVDLIVHSLKDVPTLLPTSCTLGPMMKREDSRDGLVIKKGLPNMSL 131 Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176 ++ SV+GTSS+RR A L R + V+D RG I TRL KL+ ++LA AG+ Sbjct: 132 AEMPAGSVVGTSSIRRTAQLARKYPHLKVMDVRGNIGTRLAKLDAEDSPYTCLILAAAGL 191 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 RL I + L+ + + GQGA+ IE + ++++ I H++T + ER Sbjct: 192 LRLGLGDRIYQYLDSRNAGMLYAVGQGALGIEIRKGDKAMEDILNTIGHKETTFACLAER 251 Query: 235 AFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNGNRC---DAI 286 + L L+G C + + T L +V++ DG EV +G A Sbjct: 252 SLLRTLEGGCSAPLGVETEWIQDTNGSSKLRMRSVVVSVDGSEHAEVEIDGTVDSPQSAE 311 Query: 287 NIGRDAAQYIRFISNKNVF 305 G A+ + + Sbjct: 312 EFGVTVAKALVNEGAGKIL 330 >gi|315044601|ref|XP_003171676.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893] gi|311344019|gb|EFR03222.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893] Length = 335 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 97/323 (30%), Positives = 154/323 (47%), Gaps = 21/323 (6%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K F IGTR S LA+ R++L+ + P + GD L E+ K Sbjct: 6 RKTFTIGTRKSNLAVLQTEIVRNALIA--RWPDCQFNVHTRDAAGDLNKVTPLRELTSKN 63 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK--- 119 L+TEE+E+ L++ E+D VHS KD+PT++ + ++ A++ RED RD + Q Sbjct: 64 LWTEELEEMLLAKELDLVVHSLKDVPTQIPEACKLGAFMKREDPRDALVVKKGQPKTTLA 123 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177 +L SV+GTSS+RR A + R + VID RG I+TRL KL+ + I+LA AG+ Sbjct: 124 ELPAGSVVGTSSVRRTAQIGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 183 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R E I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER Sbjct: 184 RTGYEDRISQYLDSKNGKMLHAVGQGALGVEIRADDEKMVEMLREIGDQKTTFACLAERN 243 Query: 236 FLAELDGSCKSAIAGFAYC---------KGSTLYFYGIVLASDGKIFHEVSRNG---NRC 283 L L+G C + + KG L IV + DG+ EV ++ Sbjct: 244 LLRTLEGGCSAPLGVETEWVPDASDASGKGELLRLRCIVTSVDGREAVEVEKDCGVQTPE 303 Query: 284 DAINIGRDAAQYIRFISNKNVFN 306 A G+ A + + Sbjct: 304 QAEAFGKAVADEMVEQGAGKILE 326 >gi|257069787|ref|YP_003156042.1| hydroxymethylbilane synthase [Brachybacterium faecium DSM 4810] gi|256560605|gb|ACU86452.1| hydroxymethylbilane synthase [Brachybacterium faecium DSM 4810] Length = 337 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 99/335 (29%), Positives = 155/335 (46%), Gaps = 33/335 (9%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR S LAL + ++L+D H + ++ +ST+GDR L +IGG Sbjct: 1 MTGASLRIGTRASDLALTQSGHVGAALVDGT---GHEVELVHVSTRGDRDRTSPLAQIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L+ G +D VHS KD+PT L+ + ++ Y PRED RD + +L Sbjct: 58 TGVFVTAVRQALLDGTVDVVVHSCKDLPTAPLEEITLACYPPREDPRDALCARDGLTLAQ 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKR 178 L S +GT S RR A LLR R D+ V RG +ETRL + A++LA +G++R Sbjct: 118 LPAGSRVGTGSPRRAAQLLRARPDLEVTGIRGNVETRLKRALGPEADLDAVVLAASGLRR 177 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHV----NNPKAQELVKVINHEDTWDSVNCER 234 + +E VI E+L +E P+P QGA+ +E P E + ++ T +V ER Sbjct: 178 VGREAVISELLPVEVMLPAPAQGALAVEATTAALAQEPWFAERLTAVDDPATRAAVTAER 237 Query: 235 AFLAELDGSCKSAIAGFAYCK-------------GSTLYFYGIVLASDGKIFHEVSR--- 278 L L+ C + +A +A + G L + + +DG E Sbjct: 238 MLLRTLEAGCSAPVAAYAEIEAPGAATAEGEPAGGGVLRLRALAIRTDGSHVVEGEARMA 297 Query: 279 --------NGNRCDAINIGRDAAQYIRFISNKNVF 305 +G +G + A + ++ Sbjct: 298 LDLAADALSGPESVPAALGAELAADLLSRGAGDIL 332 >gi|324990199|gb|EGC22137.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK353] Length = 306 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 110/303 (36%), Positives = 163/303 (53%), Gaps = 9/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121 +F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 119 PKGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 ++ + L P+ QGA+ +E + + + L+ + E T V ERA LA Sbjct: 179 LDQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLA 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +++ C IA FA G ++ DG+ VS G D + A + + Sbjct: 239 QMNADCTFPIAAFAQKNGQNHQLEAMLAKEDGQCVF-VSLQG--QDGQELAEQAVRQLAD 295 Query: 299 ISN 301 Sbjct: 296 KGA 298 >gi|325108657|ref|YP_004269725.1| hydroxymethylbilane synthase [Planctomyces brasiliensis DSM 5305] gi|324968925|gb|ADY59703.1| hydroxymethylbilane synthase [Planctomyces brasiliensis DSM 5305] Length = 329 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 86/322 (26%), Positives = 147/322 (45%), Gaps = 22/322 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR S LAL A + L H P N+ ++ +ST+GD L +GG G+F Sbjct: 7 TVRIATRSSELALWQATHVAALLRAEH--PDINVELVDVSTQGDADQRAPLWSMGGTGVF 64 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKL-LKGLQISAYLPREDIRDVFISHTA-------- 115 T+E+++ ++ G D AVHS KD+PT++ L ++A RE D + Sbjct: 65 TKEVQRTVLDGMADLAVHSLKDLPTEIVDPDLTLAAVPEREQRWDALVLRNDLKGDVDPA 124 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 L L + IG+ SLRR+A L R D+ +++ RG + TRL KL+ + AI+LA AG Sbjct: 125 DPLASLQDGARIGSGSLRRRAQLRAQRPDLKLLEIRGNLNTRLRKLDEGEYDAIILATAG 184 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + RL + + L P+ GQGA+ +E ++ + ++L++ +N + + + ER Sbjct: 185 LLRLGWNERLSCRLQPPVMFPAVGQGALGLECRTDDEQTRKLLESLNDPEARLATHAERR 244 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN-----------RCD 284 L L C + + +VL+ DG + + + + Sbjct: 245 LLNSLRAGCHAPVGVNCERAEGRFTLSSVVLSPDGAHQVDAEDSVDLGDDWANWQEKLSE 304 Query: 285 AINIGRDAAQYIRFISNKNVFN 306 +G A+ + + + Sbjct: 305 VGKLGEKVAEVLLEHGAQELIE 326 >gi|255953953|ref|XP_002567729.1| Pc21g06870 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589440|emb|CAP95584.1| Pc21g06870 [Penicillium chrysogenum Wisconsin 54-1255] Length = 339 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 100/319 (31%), Positives = 150/319 (47%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K IGTR S LAL +L P + I T GD T L + K Sbjct: 7 TQKTITIGTRKSKLALLQTNLVLDALKKA--FPQYEYKIFSKETAGDLNTTIALRDFNTK 64 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 L+TEE+E+ +I G++D VHS KD+PT L ++ +PRED RDV + +SL Sbjct: 65 NLWTEELEELMIDGQVDIIVHSLKDVPTTLPSSCKLGPSMPREDSRDVLVVKQGLPYKSL 124 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176 ++ SV+GTSS+RR A L R + V D RG I TRL+KL+ I+LA AG+ Sbjct: 125 SEIPAGSVVGTSSIRRTAQLARKYPHLKVQDVRGNIGTRLSKLDAEDSPYACIILAAAGL 184 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 RL I + L+ ++ + GQGA+ IE + +++ I H+DT SV ER Sbjct: 185 LRLDLADRITQYLDSKNSGMLYAVGQGALGIEIRKEDTVLHDMLDKIGHQDTTFSVLAER 244 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGN---RCDAI 286 + L L+G C + + + L +V++ DGK +V + A Sbjct: 245 SLLRTLEGGCSAPLGVETGWVQNAQGAKQLRMRSVVVSVDGKECAQVELEADVTSAESAE 304 Query: 287 NIGRDAAQYIRFISNKNVF 305 G A+ + ++ Sbjct: 305 AFGITVAKALVADGAGDIL 323 >gi|83313519|ref|YP_423783.1| porphobilinogen deaminase [Magnetospirillum magneticum AMB-1] gi|82948360|dbj|BAE53224.1| Porphobilinogen deaminase [Magnetospirillum magneticum AMB-1] Length = 262 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 106/256 (41%), Positives = 159/256 (62%) Query: 51 TNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF 110 +R L EIGGKGLFT+E+++ ++SG I AVHS KD+PT+L G+ + LPRED+RD F Sbjct: 2 QDRPLAEIGGKGLFTKELDEAMLSGRIHLAVHSMKDVPTQLPDGIVLPCILPREDVRDAF 61 Query: 111 ISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAIL 170 +S SL +L +V+GTSSLRR A +L R D+ V++FRG ++TRL KL A + Sbjct: 62 LSLKVGSLAELPQGAVVGTSSLRRGAQILHRRPDLKVVNFRGNVQTRLRKLEEGVVDATM 121 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 LA AG++RL + L+ +D P+ QGAI I ++ + + + +N D++ V Sbjct: 122 LAMAGLRRLGLAQHATSALSEDDMLPAVAQGAIGITCRADDQASLDYLAALNCPDSFVRV 181 Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGR 290 ERAFL LDGSC++ IA A G L F G++++ DG H +R+G+R DA +G+ Sbjct: 182 AAERAFLTRLDGSCRTPIAALAELDGDRLSFRGLIVSPDGTTVHATARSGSRADAEAMGK 241 Query: 291 DAAQYIRFISNKNVFN 306 DAA+ + ++ F+ Sbjct: 242 DAAEELIKVAGPGFFD 257 >gi|304317047|ref|YP_003852192.1| porphobilinogen deaminase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778549|gb|ADL69108.1| porphobilinogen deaminase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 297 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 104/299 (34%), Positives = 152/299 (50%), Gaps = 10/299 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K R+GTR S LAL + + P I+ +STKGD + N L+EIGGKG Sbjct: 1 MKKIRVGTRSSELALTQTLIVINEIKKYK--PNIEFEIVKISTKGDSVLNAPLSEIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE LI+ EID AVHS KDMP ++ L++ + RED RDVFIS + + DL Sbjct: 59 LFVKEIEDALINNEIDMAVHSMKDMPYEVPNDLKLLSVYRREDPRDVFISRSEKF-IDLK 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ IGTSSLRR L R DI ++ RG I TR+ K++ I+LA +GIKRL E Sbjct: 118 NNARIGTSSLRRSVQLKNLRPDIEIVPIRGNIATRIKKMHELNLDGIVLAASGIKRLGLE 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNN-PKAQELVKVINHEDTWDSVNCERAFLAELD 241 +IK+ ++ P+P QG + +E + + E+ ++ T+ + ER + + Sbjct: 178 DMIKDYFPVDLIVPAPCQGILAVEIRRDFEEEFFEIYPMLLDAKTFFESSAERKIMKKFG 237 Query: 242 GSCKSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 G+CK + ++ K + DGK + G D IG + I Sbjct: 238 GNCKIPLGIYSEYKRNGNDDLITVRVSYYK-DGK-LIKGRETGLMRDIDKIGDRLVEKI 294 >gi|225548234|ref|ZP_03769519.1| hypothetical protein RUMHYD_00213 [Blautia hydrogenotrophica DSM 10507] gi|225040673|gb|EEG50919.1| hypothetical protein RUMHYD_00213 [Blautia hydrogenotrophica DSM 10507] Length = 291 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 96/295 (32%), Positives = 146/295 (49%), Gaps = 8/295 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 RIG+R S LA+ + ++ L + II + T GD I +RTL +IGGKG Sbjct: 1 MNTIRIGSRESKLAVIQSELVQNYLRAQ----GLDAQIITMKTTGDIILDRTLDQIGGKG 56 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+++ L+ G D +VHS KD+P ++ + L + AY RED RDV I + D Sbjct: 57 LFVKELDRALLDGRSDLSVHSLKDLPMEVAQDLPVVAYSKREDPRDVLILPQGEKELD-- 114 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 L IG+SSLRR L + + RG + TRL KL++ + A++LA AG+KRL + Sbjct: 115 LSKPIGSSSLRRCIQLKKLFPEAECKSVRGNVLTRLEKLDSGQYSALVLAAAGVKRLGLQ 174 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I +E+ P+ GQG + ++ + N ERAF+ LDG Sbjct: 175 GRISRYFTVEEMLPAAGQGILAVQGKAGQD--YSYLGAYNDRQAQAEALAERAFVRWLDG 232 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C S +A A C+G L G+ +H+ G A +G + A+ ++ Sbjct: 233 GCSSPVAAHAVCQGERLQMTGLYYHDLTGQWHKEQIAGETSQAKMLGVELAKRMK 287 >gi|34762659|ref|ZP_00143651.1| Porphobilinogen deaminase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887680|gb|EAA24757.1| Porphobilinogen deaminase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 302 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 108/304 (35%), Positives = 147/304 (48%), Gaps = 7/304 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT--LTEIG 59 KK IG+R S LALA A + L P I + T GD+ ++I Sbjct: 1 MKKNIIIGSRGSILALAQANLIKDKLQ--INYPNLTFTIKEIVTSGDKDLKSNWENSDIS 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L Sbjct: 59 LKSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDARDVLVSKNG-FLV 117 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 118 TLPQGAKVGTSSLRRAMNLKAIRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRT 177 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I E LN E FPP+P QG + I+ N+ + ++++K I+++ V ER F Sbjct: 178 GLADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKKILKSIHNKAVAKIVEIEREFSKI 237 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DG C + + ++ G + F + L GK + + I AA+ I+ Sbjct: 238 FDGGCHTPMGCYSQINGDKIKFTAVYLDE-GKQ-IKAVVEDDLAKGKEIAYMAAEEIKNK 295 Query: 300 SNKN 303 NK Sbjct: 296 INKG 299 >gi|195336557|ref|XP_002034902.1| GM14404 [Drosophila sechellia] gi|194127995|gb|EDW50038.1| GM14404 [Drosophila sechellia] Length = 651 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 102/319 (31%), Positives = 150/319 (47%), Gaps = 23/319 (7%) Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M +K R+G+R S LAL L ++ P I +ST GDR+ N +L +I Sbjct: 1 MSAQEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKI 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + Sbjct: 59 GEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKG 118 Query: 119 KDL---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAY 173 + SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA Sbjct: 119 HTIASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQ 178 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG+ R+ I ++L D + GQGA+ +E N+ + +++ + +T + E Sbjct: 179 AGLLRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAE 238 Query: 234 RAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCD 284 R+FL L G C + +A ++ KG L G V + DG I + Sbjct: 239 RSFLKTLGGGCSAPVAVWSNLKGEPLNQNSQELGLSLTGAVWSLDGAIEIRNHLACALNE 298 Query: 285 AINIGRDAAQYIRFISNKN 303 G R + Sbjct: 299 QKLEGDQ-----RKRGAQE 312 >gi|262067556|ref|ZP_06027168.1| hydroxymethylbilane synthase [Fusobacterium periodonticum ATCC 33693] gi|291378731|gb|EFE86249.1| hydroxymethylbilane synthase [Fusobacterium periodonticum ATCC 33693] Length = 302 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 107/296 (36%), Positives = 148/296 (50%), Gaps = 7/296 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT--LTEIG 59 KK +G+R S LALA A +++L + P + I + T GD+ +++ Sbjct: 1 MKKNIIMGSRGSILALAQANLVKNNLEANY--PELSFEIKEIVTSGDKDLKSNWENSDVS 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L Sbjct: 59 LKSFFTKEIEQELLDGDIDIAVHSMKDMPAVSPKGLICGAIPDREDPRDVLVSKNG-FLV 117 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 118 TLPKGAKIGTSSLRRAMNLKAVRPDFEIKHLRGNIHTRLKKLEIEDYDAIVLAAAGLKRT 177 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I E LN E FPP+P QG + I+ N+ + +E++K I++E V ER F Sbjct: 178 GLADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKEILKSIHNEAVAKIVEIEREFSKI 237 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 DG C + + ++ G + F V + +GK + N I AA+ Sbjct: 238 FDGGCHTPMGCYSQINGDKIKFTA-VYSDEGKQ-IKAVVEDNLAKGKEIAYMAAEE 291 >gi|326402301|ref|YP_004282382.1| porphobilinogen deaminase [Acidiphilium multivorum AIU301] gi|325049162|dbj|BAJ79500.1| porphobilinogen deaminase [Acidiphilium multivorum AIU301] Length = 335 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 108/312 (34%), Positives = 155/312 (49%), Gaps = 11/312 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMD---VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 P R+GTR SPLAL ++L + P +ST GDR+T+R L EIGGK Sbjct: 22 PLRVGTRGSPLALRQTDMFLAALREICPALGFAPDAFAPEIISTTGDRVTDRPLAEIGGK 81 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI-------SHT 114 GLF +EI + L+ G ID AVHS KD+ T L G+ ++ + RED RD I + Sbjct: 82 GLFAKEIHEALLDGRIDFAVHSLKDLETALPDGIILACTMKREDARDALILADGLGPVND 141 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 L + +GTSS+RR+A LL R D+ + RG + TRL+ A LLA A Sbjct: 142 GDIWSSLPKGARVGTSSVRRQAQLLHARPDLQIGLLRGNVRTRLDAARIGTFDATLLALA 201 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G++RL E+ + ++ E P+ QG + I + + EL+ I + + ER Sbjct: 202 GLRRLGFEEEVAAAIDPEAMVPAACQGIVGITVRAADSRLAELLAAIENHEAKAVSKAER 261 Query: 235 AFLAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 A LA LDGSC++ I G A L+ G+ DG + S N DA +G + Sbjct: 262 ALLAALDGSCRTPIGGHARLLPDGNLHLTGLTARPDGSFLLKRSEVANAADAARLGAELG 321 Query: 294 QYIRFISNKNVF 305 +R S ++F Sbjct: 322 ASLRRDSPADIF 333 >gi|302553238|ref|ZP_07305580.1| porphobilinogen deaminase [Streptomyces viridochromogenes DSM 40736] gi|302470856|gb|EFL33949.1| porphobilinogen deaminase [Streptomyces viridochromogenes DSM 40736] Length = 330 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 91/312 (29%), Positives = 151/312 (48%), Gaps = 17/312 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA+A + + ++ V P + ++ ++T GD + L +IGG G+F Sbjct: 17 LRLGTRRSKLAMAQSGQVAEAVRRVTGRP---VELVEITTYGDVSREQ-LAQIGGTGVFV 72 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + L+ GE+D AVHS KD+PT L ++A RED RDV ++ A DL + Sbjct: 73 TALRDALLKGEVDFAVHSLKDLPTTQPDELVVAAVPVREDPRDVIVARDALKFTDLPSGA 132 Query: 126 VIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 IGT S RR A L + DIS + RG ++TR+ + + + A++LA AG+ R+ + Sbjct: 133 RIGTGSPRRMAQLNAYARSHSLDISTVPIRGNVDTRIGYVRSGELDAVVLAAAGLNRIGR 192 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + L+++ P+PGQGA+ IE N + ++ T +V ER+ LA L+ Sbjct: 193 GDEVTDFLSVDTVLPAPGQGALAIECAAGNADLVAALAELDDPFTRVAVTAERSLLAALE 252 Query: 242 GSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGRDA 292 C + + A + +V +DG ++S G A +GR+ Sbjct: 253 AGCSAPVGALADLLADGQIVKEMRLRAVVGTTDGTRTVQLSTTGPVPQTHDRATALGREL 312 Query: 293 AQYIRFISNKNV 304 A + + Sbjct: 313 AAEMLAQGAAGL 324 >gi|15893393|ref|NP_346742.1| porphobilinogen deaminase [Clostridium acetobutylicum ATCC 824] gi|25453028|sp|Q97MU4|HEM3_CLOAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|15022921|gb|AAK78082.1|AE007522_6 Hydroxymrthylbilane syntase (porphobilinogen deaminase) [Clostridium acetobutylicum ATCC 824] gi|325507505|gb|ADZ19141.1| porphobilinogen deaminase [Clostridium acetobutylicum EA 2018] Length = 291 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 102/295 (34%), Positives = 162/295 (54%), Gaps = 6/295 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I TR S LA + L D + + + + T GD+I +++L +IGGKGLF Sbjct: 2 KLTIATRKSKLAQVQTELIINVLKDKY---GISSEKLLMETLGDKILDKSLADIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 ++IE+ L+ + D AVHS KD+P ++ +I+A R D+RDVF+S KDL Sbjct: 59 IKDIERILLEDKADAAVHSMKDVPFEVPDMFEIAAVTLRVDVRDVFVSRDGTHFKDLKNG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +VIGTSS RR A L R DI V+ RG ++TR+ K+ K I+LA AG+KRL E + Sbjct: 119 AVIGTSSNRRAAQLKMLRDDIKVVPIRGNVQTRIRKMGEEKLDGIILAAAGLKRLNMENI 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + ++E+ P+ GQGA+ +E N K ++L + ++++++ V ER+F+ L+G C Sbjct: 179 ITDYFSVEEMIPAVGQGALGVEIKKEN-KNRDLFRKLDNKNSRMCVEAERSFMRTLNGDC 237 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S I +A + G DG+ + +GN D +++G+ A+ I Sbjct: 238 HSTIGAYAEIVNGQMNVLGF-YEIDGRRVKKD-VSGNIEDYMSLGKTLAEKILED 290 >gi|148378912|ref|YP_001253453.1| porphobilinogen deaminase [Clostridium botulinum A str. ATCC 3502] gi|153934281|ref|YP_001383295.1| porphobilinogen deaminase [Clostridium botulinum A str. ATCC 19397] gi|153936114|ref|YP_001386843.1| porphobilinogen deaminase [Clostridium botulinum A str. Hall] gi|166201502|sp|A7FSG8|HEM3_CLOB1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|166201503|sp|A5I0B2|HEM3_CLOBH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|148288396|emb|CAL82473.1| porphobilinogen deaminase [Clostridium botulinum A str. ATCC 3502] gi|152930325|gb|ABS35825.1| porphobilinogen deaminase [Clostridium botulinum A str. ATCC 19397] gi|152932028|gb|ABS37527.1| hydroxymethylbilane synthase [Clostridium botulinum A str. Hall] Length = 290 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 102/294 (34%), Positives = 152/294 (51%), Gaps = 6/294 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LA L H + + T GD+I +L +IGGKGLF Sbjct: 3 FVIATRRSKLAQVQTEIIIDLLNKKH---DIECEKLLIETVGDKILEVSLDKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL + Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L R D+ ++ RG ++TR+ K+ ++LA AG+KR+ + +I Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGVILAVAGLKRVNLDHLI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ GQGA+ IE +PK EL K ++H ++ V ERAF+ ELDG C Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPKK-ELFKDLDHYNSKICVLAERAFMRELDGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S I +A K + ++ GI + + G + +G A++I Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGISLAEHILKD 290 >gi|227505107|ref|ZP_03935156.1| porphobilinogen deaminase [Corynebacterium striatum ATCC 6940] gi|227198310|gb|EEI78358.1| porphobilinogen deaminase [Corynebacterium striatum ATCC 6940] Length = 295 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 84/300 (28%), Positives = 138/300 (46%), Gaps = 8/300 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F+IGTR S LA + R L + ++T GD + IG G+FT Sbjct: 2 FKIGTRGSKLATTQSGHVREWLKAN----GFESELHIVTTHGDVNM-APVERIG-VGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + L GE D AVHS KD+PT + R+D+R+ ++ +L L + Sbjct: 56 QALREALYGGECDIAVHSFKDLPTA-ADERFLLVVPERQDVREALVARDGLTLAQLPEGA 114 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTS+ RR + L R D+ + RG I+TR+ K+ + + A++LAYAG+ R + + Sbjct: 115 RVGTSAPRRISQLKAMRPDLDIQPLRGNIDTRMGKVTSGELDAVVLAYAGLVRADYQDMA 174 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+ + F P+P QGA+ IE + A ++ + E + ER L+ L+ C Sbjct: 175 SEVFAPDTFMPAPAQGALAIEAV-KDSAAARAIETLIDEQASAASLGERTVLSRLEAGCT 233 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + +A + + L G V A DG S G DA +G ++ + + Sbjct: 234 APVAATSTIENGQLTVRGGVFALDGSRQLLASATGPLSDAAQLGSAVSEELFSRGAAELL 293 >gi|161486849|ref|NP_781392.2| porphobilinogen deaminase [Clostridium tetani E88] Length = 290 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 100/294 (34%), Positives = 148/294 (50%), Gaps = 6/294 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 + TR S LA + + + + + T GD+I +RTL +IGGKGLF Sbjct: 2 KLIVATRRSILAQTQTDLVIKKIEEDN---EVKCEKLLIQTLGDKILDRTLDKIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIEK L+ G+ AVHS KD+P ++ I A RED+RD F+S +L Sbjct: 59 IKEIEKALLDGKAHMAVHSMKDVPYEVPSMFYIGAIPRREDVRDAFVSRDGTKFMELPSG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S IGTSS RR + + R D+ V+ RG ++TRL K+ +LA AG+KRL E+V Sbjct: 119 SKIGTSSRRRSSQIKILRPDVEVVPIRGNVQTRLRKIEEMNLAGTILAVAGLKRLNMEEV 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I + + E+ P+ GQGA+ IE + +K I+HE+T V ER+F+ L G C Sbjct: 179 ITDYFSPEEMVPAIGQGALGIEIKKYED-VIDYIKGIDHEETRICVEGERSFMEALKGDC 237 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 S I A + +Y G + +GK + G + + +G+ A I Sbjct: 238 HSTIGAHAIVENDLMYMTG-IFEVNGK-IVKKDIEGKKENYKQLGKTLADRIMK 289 >gi|190570895|ref|YP_001975253.1| porphobilinogen deaminase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019411|ref|ZP_03335217.1| porphobilinogen deaminase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357167|emb|CAQ54582.1| porphobilinogen deaminase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212994833|gb|EEB55475.1| porphobilinogen deaminase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 292 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 113/296 (38%), Positives = 160/296 (54%), Gaps = 10/296 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LAL A E + L++ P ++ II + T GD+ N TL EIGGKGLF Sbjct: 3 VKIGTRGSDLALIQALEAKQRLLE--SFPNLSVEIIKIKTSGDKYANVTLAEIGGKGLFL 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EIE +L+ ID AVHS KD+P K L I L R DVFISH +SLK L + Sbjct: 61 REIEAELLKNNIDMAVHSLKDVPAFFSKDLTIPCVLERLSPCDVFISHKYKSLKTLPQQA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 I TSS+RRK LL R D++V+ RG + TR L N ++LA AG+ RLKK +I Sbjct: 121 TIATSSIRRKVQLLNLRPDLNVVPLRGNVTTR---LQNQNFDGMILAEAGLIRLKKYHLI 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L + + GQG ICI+ N+ K +L++ IN+ ++ ER+F+ ++GSC Sbjct: 178 TEVLPPKVMLSAVGQGTICIQCRKNDIKVIDLLEKINNNMSFIRAKSERSFMKTVNGSCF 237 Query: 246 SAIAGFAY-CKGSTLYFYGIVLASDGKIFHE-VSRNGNRCDAINIGRDAAQYIRFI 299 + +A A + L+ Y ++ G+ R DA +G DA ++ Sbjct: 238 TPLAALAEYVSENMLHLYCMLA---GERVIYFTERTSFVEDAEKMGMDAGLELKSK 290 >gi|226948193|ref|YP_002803284.1| hydroxymethylbilane synthase [Clostridium botulinum A2 str. Kyoto] gi|254800244|sp|C1FVB9|HEM3_CLOBJ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|226840754|gb|ACO83420.1| hydroxymethylbilane synthase [Clostridium botulinum A2 str. Kyoto] Length = 290 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 103/294 (35%), Positives = 152/294 (51%), Gaps = 6/294 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LA L H + + T GD+I +L +IGGKGLF Sbjct: 3 FVIATRRSKLAQVQTEIIIDLLNKKH---DIECEKLLIETVGDKILEVSLDKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL + Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ GQGA+ IE +PK EL K ++H ++ V ERAF+ ELDG C Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPKK-ELFKDLDHYNSKICVLAERAFMRELDGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S I +A K + ++ GI + + G + +G A++I Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGISLAEHILKD 290 >gi|148253694|ref|YP_001238279.1| hydroxymethylbilane synthase [Bradyrhizobium sp. BTAi1] gi|146405867|gb|ABQ34373.1| hydroxymethylbilane synthase [Bradyrhizobium sp. BTAi1] Length = 325 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 94/324 (29%), Positives = 135/324 (41%), Gaps = 22/324 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + FRIGTR S +ALA E L IP +I I+ T GD L GG Sbjct: 1 MTR--FRIGTRKSTMALAQTEEIARRLQAA--IPSLDIEIVKFETTGDSDQTSKLLTHGG 56 Query: 61 KG-LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIR-DVFISHT---- 114 KG F EI + ++ G + A+HS KDMP + A L D DV + Sbjct: 57 KGGAFVAEIRRAMLDGRLHAAMHSLKDMPGNEETPGLVIAALLSRDPPGDVLVLRRGLSL 116 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN---------- 164 + KD IGT+++RR A R +I FRG +TR+ KL+N Sbjct: 117 DEFRKDGGRGFKIGTNAVRRAAYARRLFPQAELIHFRGAADTRIRKLDNGELQRLPDGGA 176 Query: 165 --KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 A A+++A +G++R+ D P+ GQG + +E + + + ++ I+ Sbjct: 177 VGPADALIMARSGLERVGLSDRASFDFAAADMLPAVGQGIVAVECPSLDWETRRILATID 236 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 + ER L L+G C S IAGFA G + VL DG F E R G Sbjct: 237 DGAARSCADAEREVLWVLNGHCNSPIAGFATIDGDQMTLTASVLDEDGGRFIEAQRAGPA 296 Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306 +GR + + Sbjct: 297 DRPRELGRTVGLELLANGAAELIE 320 >gi|194864825|ref|XP_001971126.1| GG14785 [Drosophila erecta] gi|190652909|gb|EDV50152.1| GG14785 [Drosophila erecta] Length = 650 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 101/319 (31%), Positives = 149/319 (46%), Gaps = 23/319 (7%) Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M + R+G+R S LAL L ++ P I +ST GDR+ N +L +I Sbjct: 1 MSAQENVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKI 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + Sbjct: 59 GEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRDNFKG 118 Query: 119 KDL---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAY 173 + SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA Sbjct: 119 HTIASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQ 178 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG+ R+ I ++L D + GQGA+ +E N+ + +++ + +T + E Sbjct: 179 AGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAE 238 Query: 234 RAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCD 284 R+FL L G C + +A ++ KG L G V + DG I + Sbjct: 239 RSFLKTLGGGCSAPVAVWSNLKGEPLNGNSQEVGLSLTGAVWSLDGAIEIRNHLACALNE 298 Query: 285 AINIGRDAAQYIRFISNKN 303 G R + Sbjct: 299 QKLEGEQ-----RKRGAQE 312 >gi|257452372|ref|ZP_05617671.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_5R] gi|317058915|ref|ZP_07923400.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_5R] gi|313684591|gb|EFS21426.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_5R] Length = 299 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 106/301 (35%), Positives = 163/301 (54%), Gaps = 6/301 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL--TEI 58 M K+ +G+R S LALA + L H P + I + T+GD+ + ++ Sbjct: 1 MSKQQIILGSRGSILALAQTNWVKEQLEKYH--PELSFSIQIIETQGDKDLHSHFGNSQS 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 K FT+EIEK L+ GEID AVHS KD+P+ GL A RED+RDV IS + + L Sbjct: 59 SLKSFFTKEIEKSLLEGEIDIAVHSMKDVPSVSPAGLICGAIPIREDVRDVLISRSGKPL 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +L ++IGTSSLRR + + R D+ + RG I TRL KL + AI+LA AG+KR Sbjct: 119 AELPQGAIIGTSSLRRIQNIKKIRPDLEIKALRGNIHTRLRKLEEEQYDAIILAAAGLKR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 +K E+ I E L+ FPP+P QGA+ I+ + + Q++++ I++++ + ER F Sbjct: 179 VKLEEKITEYLDPTVFPPAPAQGALYIQCREEDIEVQKILQSIHNKNLEKVLVVEREFSK 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 DG C + + ++ +G TL F+ + + ++ N +I R AAQ I Sbjct: 239 IFDGGCHTPMGCYSNLQGDTLEFFAMYSHEN--KRYQTKVVENLSKGKDIARMAAQKIEK 296 Query: 299 I 299 + Sbjct: 297 M 297 >gi|313215076|emb|CBY42810.1| unnamed protein product [Oikopleura dioica] Length = 368 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 102/347 (29%), Positives = 160/347 (46%), Gaps = 47/347 (13%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 G+R S LA+ +S L + P I I + TKGD++ + L++IG K LF Sbjct: 2 KLVAGSRKSELAMLQTNFVKSLLKKAN--PKLEIEIEGIVTKGDKVLDVALSKIGEKSLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA------QSL 118 T+E+E L G++ VHS KDMPT L +G+ +S L RE D + +SL Sbjct: 60 TKELEVALQEGKVQFLVHSLKDMPTTLPEGMVLSTILERESPEDAVVIRKDLADKGIKSL 119 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------NKAHAILLA 172 L ++IG+SSLRRKA L R + + RG + TRL KL+N + A++LA Sbjct: 120 DQLEKTALIGSSSLRRKAQLKRKYPEFRIESVRGNLNTRLKKLDNVEKSYETEYSALILA 179 Query: 173 YAGIKRLKKEKVIK-----EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227 AG++R+ ++ E L+ + + GQGA+ IET + K EL+ ++HE+T Sbjct: 180 RAGLERMARQNETFVGRLSETLDTKTCLYAVGQGALAIETMATDEKTIELLSSLSHEETT 239 Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY-FYGIVLASDGKIFHEVS--------- 277 V ER+F+ L+G C + +A + K + G V + DGK + Sbjct: 240 LRVVAERSFMKALNGGCSAPVAVESKIKDDNILALTGGVFSLDGKESIIKTENIDLCPAK 299 Query: 278 -------------RNGNRCD-----AINIGRDAAQYIRFISNKNVFN 306 G A+ +GR+ A+ + + Sbjct: 300 MPKIKYPFDYVGIVRGKIDKSKMYLAMKLGRELAEQLIADGAMKILE 346 >gi|327297350|ref|XP_003233369.1| porphobilinogen deaminase [Trichophyton rubrum CBS 118892] gi|326464675|gb|EGD90128.1| porphobilinogen deaminase [Trichophyton rubrum CBS 118892] Length = 331 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 98/320 (30%), Positives = 151/320 (47%), Gaps = 18/320 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K F IGTR S LA+ R +L+ + P + GD L E K Sbjct: 5 RKTFTIGTRKSNLAVLQTEIVRDALVA--RWPDCEFNVHTRDAAGDLNKITPLREFTSKN 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK--- 119 L+TEE+E+ L++ ++D VHS KD+PT++ + +SA + RED RD + Q Sbjct: 63 LWTEELEEMLLAKQLDLVVHSLKDVPTQIPEACTLSAIMKREDPRDALVVKKGQPKTTLA 122 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177 +L SV+GTSS+RR A L R + VID RG I+TRL KL+ + I+LA AG+ Sbjct: 123 ELPAGSVVGTSSVRRTAQLGRHYPHLKVIDVRGNIDTRLAKLDAEDGPFTCIILAAAGLL 182 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R I + L+ ++ + GQGA+ +E ++ K E+++ I + T + ER Sbjct: 183 RSGHGDRIAQYLDSKNGKMLHAVGQGALGVEIRADDEKMVEMLREIGDQKTTFACLAERN 242 Query: 236 FLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 L L+G C + + KG L IV + DGK E+ ++ N A Sbjct: 243 LLRTLEGGCSAPLGVETEWVPDASGKGEMLRLRCIVTSIDGKEAVEIEKDCNVHTPEQAE 302 Query: 287 NIGRDAAQYIRFISNKNVFN 306 G+ A + + Sbjct: 303 AFGKAVAGEMVEKGAGKILE 322 >gi|153939780|ref|YP_001390273.1| porphobilinogen deaminase [Clostridium botulinum F str. Langeland] gi|166201504|sp|A7GBW3|HEM3_CLOBL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|152935676|gb|ABS41174.1| hydroxymethylbilane synthase [Clostridium botulinum F str. Langeland] gi|295318368|gb|ADF98745.1| hydroxymethylbilane synthase [Clostridium botulinum F str. 230613] Length = 290 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 104/294 (35%), Positives = 152/294 (51%), Gaps = 6/294 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LA L H + + T GD+I +L +IGGKGLF Sbjct: 3 FIIATRRSKLAQVQTEIIIDLLNKKH---DIECEKLLIETVGDKILEVSLDKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL + Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPKREDVRDAFISLDNIKFKDLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ E +I Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLEHLI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ GQGA+ IE +PK EL K ++H ++ V ERAF+ ELDG C Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPKK-ELFKDLDHYNSKICVLAERAFMRELDGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S I +A K + ++ GI + + G + +G A++I Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGIALAEHILKD 290 >gi|324993558|gb|EGC25478.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK405] gi|324995130|gb|EGC27042.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK678] gi|327458927|gb|EGF05275.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1057] gi|327461831|gb|EGF08162.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1] Length = 306 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 106/303 (34%), Positives = 160/303 (52%), Gaps = 9/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKKLH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121 +F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 119 PEGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 ++ + L P+ QGA+ +E + + ++L+ + E T V ER LA Sbjct: 179 LDQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDEKTAAEVAVERVVLA 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +++ C IA FA G ++ DG+ + D + A + + Sbjct: 239 QMNADCTFPIAAFAQKNGQDYQLEAMLAKEDGQCVF---VSLKGQDGQQLAEQAVRQLAD 295 Query: 299 ISN 301 Sbjct: 296 KGA 298 >gi|188589216|ref|YP_001922029.1| porphobilinogen deaminase [Clostridium botulinum E3 str. Alaska E43] gi|254800242|sp|B2UXC4|HEM3_CLOBA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|188499497|gb|ACD52633.1| porphobilinogen deaminase [Clostridium botulinum E3 str. Alaska E43] Length = 290 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 105/295 (35%), Positives = 157/295 (53%), Gaps = 6/295 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 I TR S LA S L I ++I+ T+GDR + +L +IGGKG Sbjct: 1 MNELIIATRKSKLAQVQTEIIMSELKSKFNIDSKKLLIV---TEGDRKLDVSLNKIGGKG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF ++IE L++ E AVHS KD+P ++ +I+A REDIRDVFIS+ S KD+ Sbjct: 58 LFVKDIELALLNKEAHAAVHSMKDVPFEVSSEFEITAITGREDIRDVFISNGDISFKDIK 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSS+RR A L RSD+ ++ RG ++TRL K+ I+LA AG+KRL E Sbjct: 118 KGAKVGTSSIRRAAQLKLLRSDLEIVPIRGNVQTRLKKMEEQNLDGIVLAAAGLKRLGDE 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +I + + ++F P+ QGA+ IE + A + + + + +V ER+F+ EL G Sbjct: 178 NLITDYFDPKEFLPAVSQGALGIECLKDGD-ANKYFEALIDAEATLTVEAERSFMKELQG 236 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C S I ++ +G LY GI G + G + + I +G+ AQ I Sbjct: 237 DCHSLIGAYSEIQGDDLYMIGIY--DIGGKIVKKDILGCKTNNIELGKKLAQKIL 289 >gi|332365713|gb|EGJ43471.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1059] Length = 306 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 110/303 (36%), Positives = 162/303 (53%), Gaps = 9/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKKLH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121 +F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISKREDVRDCLIFRQAGQTLADL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 119 PEGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 ++ + L P+ QGA+ +E + + + L+ + E T V ERA LA Sbjct: 179 LDQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLATVQDEKTAAEVAVERAVLA 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +++ C IA A KG ++ DG+ VS G D + A + + Sbjct: 239 QMNADCTFPIAALAQKKGQDYQLEAMLAKEDGQCVF-VSLQG--QDGQQLAEQAVRQLAD 295 Query: 299 ISN 301 Sbjct: 296 KGA 298 >gi|313227065|emb|CBY22212.1| unnamed protein product [Oikopleura dioica] Length = 382 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 102/347 (29%), Positives = 161/347 (46%), Gaps = 47/347 (13%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 G+R S LA+ +S L + P I I + TKGD++ + L++IG K LF Sbjct: 2 KLVAGSRKSELAMLQTNFVKSLLKKAN--PKLEIEIEGIVTKGDKVLDVALSKIGEKSLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA------QSL 118 T+E+E L G++ VHS KDMPT L +G+ +S L RE D + +SL Sbjct: 60 TKELEIALQEGKVQFLVHSLKDMPTTLPEGMVLSTILERESPEDAVVIRKDLADKGIKSL 119 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------NKAHAILLA 172 L ++IG+SSLRRKA L R + + RG + TRL KL+N + A++LA Sbjct: 120 DQLEKTALIGSSSLRRKAQLKRKYPEFRIESVRGNLNTRLKKLDNVEKSYETEYSALILA 179 Query: 173 YAGIKRLKKEKVIK-----EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227 AG++R+ ++ E L+ + + GQGA+ IET + K EL+ ++HE+T Sbjct: 180 RAGLERMARQNETFVGRLSETLDTKTCLYAVGQGALAIETMATDEKTIELLSSLSHEETT 239 Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY-FYGIVLASDGKIFHEVS--------- 277 V ER+F+ L+G C + +A + K + G V + DGK + Sbjct: 240 LRVVAERSFMKALNGGCSAPVAVESKIKDDNILALTGGVFSLDGKESIIKTENIDLCPAK 299 Query: 278 -------------RNGNRCD-----AINIGRDAAQYIRFISNKNVFN 306 G A+ +GR+ A+++ + Sbjct: 300 MPKIKYPFDYVGIVRGKIDKSKMYLAMKLGRELAEHLIADGAMKILE 346 >gi|195586907|ref|XP_002083209.1| GD13613 [Drosophila simulans] gi|194195218|gb|EDX08794.1| GD13613 [Drosophila simulans] Length = 651 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 102/319 (31%), Positives = 150/319 (47%), Gaps = 23/319 (7%) Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M +K R+G+R S LAL L ++ P I +ST GDR+ N +L +I Sbjct: 1 MSAQEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKI 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + Sbjct: 59 GEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKG 118 Query: 119 KDL---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAY 173 + SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA Sbjct: 119 HTIASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQ 178 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG+ R+ I ++L D + GQGA+ +E N+ + +++ + +T + E Sbjct: 179 AGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAE 238 Query: 234 RAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCD 284 R+FL L G C + +A ++ KG L G V + DG I + Sbjct: 239 RSFLKTLGGGCSAPVAVWSNLKGEPLNGNSQEVGLSLTGAVWSLDGAIEIRNHLACALNE 298 Query: 285 AINIGRDAAQYIRFISNKN 303 G R + Sbjct: 299 QKLEGDQ-----RKRGAQE 312 >gi|20130425|ref|NP_612103.1| lethal (3) 02640 [Drosophila melanogaster] gi|7292071|gb|AAF47484.1| lethal (3) 02640 [Drosophila melanogaster] gi|77403925|gb|ABA81841.1| GH16723p [Drosophila melanogaster] gi|211938543|gb|ACJ13168.1| FI03834p [Drosophila melanogaster] gi|220951602|gb|ACL88344.1| l(3)02640-PA [synthetic construct] Length = 652 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 102/319 (31%), Positives = 150/319 (47%), Gaps = 23/319 (7%) Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M +K R+G+R S LAL L ++ P I +ST GDR+ N +L +I Sbjct: 1 MSAQEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKI 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + Sbjct: 59 GEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKG 118 Query: 119 KDL---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAY 173 + SVIGTSSLRR A + R ++V D RG + TRL KL+ ++K I+LA Sbjct: 119 HTIASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQ 178 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG+ R+ I ++L D + GQGA+ +E N+ + +++ + +T + E Sbjct: 179 AGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAE 238 Query: 234 RAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCD 284 R+FL L G C + +A ++ KG L G V + DG I + Sbjct: 239 RSFLKTLGGGCSAPVAVWSNLKGEPLNGNSQEVGLSLTGAVWSLDGAIEIRNHLACALNE 298 Query: 285 AINIGRDAAQYIRFISNKN 303 G R + Sbjct: 299 QKLEGDQ-----RKRGAQE 312 >gi|170757497|ref|YP_001780553.1| porphobilinogen deaminase [Clostridium botulinum B1 str. Okra] gi|229836107|sp|B1IHD1|HEM3_CLOBK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|169122709|gb|ACA46545.1| porphobilinogen deaminase [Clostridium botulinum B1 str. Okra] Length = 290 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 103/294 (35%), Positives = 152/294 (51%), Gaps = 6/294 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LA L H + + T GD+I +L +IGGKGLF Sbjct: 3 FVIATRRSKLAQVQTEIIIDLLNKKH---DIECEKLLIETVGDKILEVSLDKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL + Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ GQGA+ IE +PK EL K ++H ++ V ERAF+ ELDG C Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPKK-ELFKDLDHYNSKICVLAERAFMRELDGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S I +A K + ++ GI + + G + +G A++I Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGIALAEHILKD 290 >gi|327473567|gb|EGF18987.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK408] Length = 306 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 105/303 (34%), Positives = 159/303 (52%), Gaps = 9/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKKLH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121 +F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+ RL Sbjct: 119 PEGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLNRLGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 ++ + L P+ QGA+ +E + + ++L+ + E T V ER LA Sbjct: 179 LDQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDEKTAAEVAVERVVLA 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +++ C IA FA G ++ DG+ + D + A + + Sbjct: 239 QMNADCTFPIAAFAQKNGQDYQLEAMLAKEDGQCVF---VSLKGQDGQQLAEQAVRQLAD 295 Query: 299 ISN 301 Sbjct: 296 KGA 298 >gi|125717350|ref|YP_001034483.1| porphobilinogen deaminase [Streptococcus sanguinis SK36] gi|254800260|sp|A3CL78|HEM3_STRSV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|125497267|gb|ABN43933.1| Porphobilinogen deaminase, putative [Streptococcus sanguinis SK36] Length = 306 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 110/303 (36%), Positives = 161/303 (53%), Gaps = 9/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121 +F +EIE+ L++GEI+ AVHS KDMP KL +G + A RED+RD I Q+L DL Sbjct: 59 VFVKEIERALLAGEINMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 S+IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 119 PKGSLIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 ++ + L P+ QGA+ +E + + L+ + E T V ERA LA Sbjct: 179 LDQSRLHIQPLETSLCLPAISQGALAVECREEDEELLSLLAAVQDEKTAAEVAVERAVLA 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +++ C IA FA G ++ DG+ VS G D + A + + Sbjct: 239 QMNADCTFPIAAFAQKNGQGYQLEAMLAKEDGQCIF-VSLQG--QDGQQLAEQAVRQLAD 295 Query: 299 ISN 301 Sbjct: 296 KGA 298 >gi|317507248|ref|ZP_07964994.1| porphobilinogen deaminase [Segniliparus rugosus ATCC BAA-974] gi|316254442|gb|EFV13766.1| porphobilinogen deaminase [Segniliparus rugosus ATCC BAA-974] Length = 309 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 97/303 (32%), Positives = 152/303 (50%), Gaps = 10/303 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA A R ++ + ++ ++T GDR++ + EIG G+FT Sbjct: 2 IRVGTRGSLLATTQAATVRDAIRAL----GEQAELVIVNTIGDRVSG-PIVEIG-VGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + L++ EID AVHS KD+PT + A R D RDV +S + L DL S Sbjct: 56 SALRDALLADEIDVAVHSLKDLPTAQDPRFSLVAVPERADPRDVLVSRSGSRLADLPPGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT + RR A L R+D+ + RG +++R+ K+ + AI++A AG+ RL +E+ Sbjct: 116 AVGTGAPRRSAQLRLARADLEIQPIRGNLDSRMRKVATAECDAIVVARAGLLRLGREQEA 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKA-QELVKVINHEDTWDSVNCERAFLAELDGSC 244 EIL+ P+PGQGA+ +E P + E++ ++HE + + ERA LAEL C Sbjct: 176 TEILDPAVMLPAPGQGALAVECRSEAPVSLTEVLGRLDHEHSRVTSAAERAVLAELSAGC 235 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISN 301 + A TL V A DG +++ N A +GR A+ +R + Sbjct: 236 SGPVGALARIDAQTLRVEAAVCALDGSRQIREAQSAQLLNESHAAALGRRVAESLRSMGA 295 Query: 302 KNV 304 + Sbjct: 296 MEL 298 >gi|170759533|ref|YP_001786306.1| porphobilinogen deaminase [Clostridium botulinum A3 str. Loch Maree] gi|238058921|sp|B1KY15|HEM3_CLOBM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|169406522|gb|ACA54933.1| hydroxymethylbilane synthase [Clostridium botulinum A3 str. Loch Maree] Length = 290 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 103/294 (35%), Positives = 152/294 (51%), Gaps = 6/294 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LA L H + + T GD+I +L +IGGKGLF Sbjct: 3 FIIATRRSKLAQVQTEIIIDLLNKKH---DIECEKLLIETVGDKILEVSLDKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL + Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLREGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ GQGA+ IE +PK EL K ++H ++ V ERAF+ ELDG C Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPKK-ELFKDLDHYNSKICVLAERAFMRELDGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S I +A K + ++ GI + + G + +G A++I Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIVKKEITGTKDQYEKLGIALAEHILKD 290 >gi|332363288|gb|EGJ41073.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK49] Length = 306 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 110/303 (36%), Positives = 163/303 (53%), Gaps = 9/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG Sbjct: 1 MKVIKVGTRKSKLAITQTQQLVDQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121 +F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISRREDVRDCLIFRQAGQTLADL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 119 PKGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 ++ + L P+ QGA+ +E + + + L+ + E T V ERA LA Sbjct: 179 LDQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLA 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +++ C IA FA G ++ DG+ VS G D + A + + Sbjct: 239 QMNADCTFPIAAFAQKNGQDYQLEAMLAKEDGQCVF-VSLQG--QDGQELAEQAVRQLAD 295 Query: 299 ISN 301 Sbjct: 296 KGA 298 >gi|295839212|ref|ZP_06826145.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74] gi|197695664|gb|EDY42597.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74] Length = 314 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 98/313 (31%), Positives = 161/313 (51%), Gaps = 15/313 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR SPLALA + L P +I ++P++TK D+ L ++GGKGLF Sbjct: 1 MRIGTRSSPLALAQVEQVSGLLRKFE--PDLDIEVVPVTTKADKWQG-DLAQLGGKGLFV 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDL-- 121 EI++ L G++D AVH KD+P + +GL +AYLPR+D+RDV + ++ L Sbjct: 58 REIDQMLQRGQVDMAVHCMKDVPGDVPMPRGLIFAAYLPRDDVRDVLLVPEGSDVQSLAG 117 Query: 122 -ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-----NNKAHAILLAYAG 175 + + TS++RRKA + R R D++V+ RG + +R++KL+ ++ A++LA AG Sbjct: 118 LPPGASVATSAVRRKAQINRVRPDLNVVRVRGLVGSRIDKLDGRKPMDHMLDAMVLARAG 177 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 ++RL +++ + + P+ G GA+ +E ++ L++ +N E T + ER Sbjct: 178 LERLDLMHRARQVFEVAEMLPAVGAGALGLECREDDDAVAYLLQQLNDEPTMTEITAERV 237 Query: 236 FLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNG-NRCDAINIGRDAA 293 L L G C S IAG L G+V + DG F G + D +G Sbjct: 238 MLHGLRGHCNSPIAGHCVTDPDGQLSLRGMVFSRDGSKFVHAHFWGESMNDPAVLGSRVC 297 Query: 294 QYIRFISNKNVFN 306 + +++ Sbjct: 298 AELLRQGARDIIE 310 >gi|294630701|ref|ZP_06709261.1| porphobilinogen deaminase [Streptomyces sp. e14] gi|292834034|gb|EFF92383.1| porphobilinogen deaminase [Streptomyces sp. e14] Length = 326 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 90/324 (27%), Positives = 152/324 (46%), Gaps = 29/324 (8%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA+A + + ++ V P + ++ ++T GD L +IGG G+F Sbjct: 1 MRLGTRRSKLAMAQSGQVADAVSQVTGRP---VELVEITTYGDTSR-EHLAQIGGTGVFV 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + L GE+D AVHS KD+PT L ++A RED RDV ++ A DL + Sbjct: 57 AALREALARGEVDFAVHSLKDLPTAQPAELVLAAIPEREDPRDVLVARDALKFADLPRGA 116 Query: 126 VIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +GT S RR A L + DI + RG ++TR+ ++ + A++LA AG+ R+ + Sbjct: 117 RVGTGSPRRMAQLNAYARAHGLDIETVPIRGNVDTRIGFVHGGELDAVVLAAAGLNRIGR 176 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + + L+++ P+PGQGA+ IE + + ++ T +V ER+ LA L+ Sbjct: 177 GDEVTDFLSVDTVLPAPGQGALAIECAADRADLVAALAELDDPHTRAAVTAERSLLAALE 236 Query: 242 GSCKSAIAGFAYCKG-----------------STLYFYGIVLASDGKIFHEVSRNGNR-- 282 C + + A + G+V +DG ++S G Sbjct: 237 AGCSAPVGALADLPPLSAPLERAEPQADRQIVKEMRLRGVVGTTDGSTLVQLSTTGPVPR 296 Query: 283 --CDAINIGRDAAQYIRFISNKNV 304 DA+ +GR+ A + + Sbjct: 297 THDDAMALGRELATEMLARGAAGL 320 >gi|168182770|ref|ZP_02617434.1| hydroxymethylbilane synthase [Clostridium botulinum Bf] gi|237794217|ref|YP_002861769.1| porphobilinogen deaminase [Clostridium botulinum Ba4 str. 657] gi|259647792|sp|C3L2Z3|HEM3_CLOB6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|182673912|gb|EDT85873.1| hydroxymethylbilane synthase [Clostridium botulinum Bf] gi|229263906|gb|ACQ54939.1| hydroxymethylbilane synthase [Clostridium botulinum Ba4 str. 657] Length = 290 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 104/294 (35%), Positives = 153/294 (52%), Gaps = 6/294 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LA L H + + T GD+I +L +IGGKGLF Sbjct: 3 FIIATRRSKLAQVQTEIIIDLLNKKH---DIECEKLLIETVGDKILEVSLDKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL + Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLREGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L RSD+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I Sbjct: 120 KIGTSSRRRAAQLKLLRSDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ GQGA+ IE +PK EL K ++H ++ V ERAF+ ELDG C Sbjct: 180 TDYFDTKEMVPAIGQGALGIEVMEEHPKK-ELFKDLDHYNSKICVLAERAFMRELDGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S I +A K + ++ GI + + G + +G A++I Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGIALAEHILKD 290 >gi|332016383|gb|EGI57296.1| Porphobilinogen deaminase [Acromyrmex echinatior] Length = 358 Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 108/358 (30%), Positives = 167/358 (46%), Gaps = 54/358 (15%) Query: 1 MEKKP----FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLT 56 M R+G+R S LAL L ++H P I+ ++TKGD+I +++L Sbjct: 1 MNDDKKCDVIRVGSRKSELALIQTKHVIQCLKEIH--PKKEFEIVTMNTKGDKILDKSLP 58 Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-- 114 +IG K LFTEE+E L +G +D VHS KD+PT L G+ + A L RED RD + Sbjct: 59 KIGEKSLFTEELELALENGSVDFVVHSLKDLPTILPVGMALGAILKREDPRDAVVMSKKF 118 Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILL 171 ++L L SVIGTSSLRR A LLR + + + RG + TRL KL N AI+L Sbjct: 119 KDKTLSTLPKDSVIGTSSLRRSAQLLRNMPHLKIENIRGNLNTRLKKLNDENGPYAAIIL 178 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+KR+ E I ++L +E+ + GQGA+ +E ++ K + +++ + + + Sbjct: 179 AAAGLKRMGWEDKISQLLELEEALYAVGQGALGVECRESDWKIRSILEPLFDLEATLTCV 238 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR----CD--- 284 CER+FL L G C + +A + K + L G V + DG+ + D Sbjct: 239 CERSFLKTLGGGCSAPVAVSSSLKKNELTITGAVWSLDGQTLITDTSKSKLYLPNDDGEP 298 Query: 285 ----------------------------AINIGRDAAQYIRFISN--------KNVFN 306 A +G+D A+ + + + + Sbjct: 299 PRKCPYQEPRLYCSVIPSYKISSISLLGAEFLGKDLAKNLIKKNALDVMSQARNEILD 356 >gi|73668987|ref|YP_305002.1| porphobilinogen deaminase [Methanosarcina barkeri str. Fusaro] gi|121731279|sp|Q46CH0|HEM3_METBF RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|72396149|gb|AAZ70422.1| hydroxymethylbilane synthase [Methanosarcina barkeri str. Fusaro] Length = 316 Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 103/304 (33%), Positives = 151/304 (49%), Gaps = 9/304 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG-GKGLF 64 IGTR S LALA A L + + T GDR T+R L + G G F Sbjct: 1 MIIGTRGSQLALAQAETVARLLKAK----GVETSLKIIKTSGDRFTDRPLHAVSSGVGAF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 E+++ ++ G+ID AVHS KDMPT L A L R+ D+ +++ L +L+ Sbjct: 57 VRELDEVMLEGKIDIAVHSMKDMPTIRPPTLPTVAVLKRDTPFDLLLTYDGTPLDELSEQ 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S+IGTSSLRR A + R+R D+ D RG I+TRL KL K ILLA AG++R+ E Sbjct: 117 SIIGTSSLRRAAQIKRYRPDLVTQDLRGNIDTRLRKLKEGKYDGILLAKAGLERMGWELE 176 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 EIL+ + F PSP QG I + T +A+ V ++H D+ + ER ++EL G C Sbjct: 177 G-EILSPDFFCPSPNQGTIAVVTR-AETEAEAAVSRLDHTDSRIATEIERILISELGGGC 234 Query: 245 KSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 + I +A L+ VL+ DG+ ++ I R+ + + K Sbjct: 235 TTPIGSYAEIMPDRKKLHVRAEVLSLDGEETVGINEFIPMAGGIEKARELGSSLVHMGGK 294 Query: 303 NVFN 306 + + Sbjct: 295 KLAD 298 >gi|330470294|ref|YP_004408037.1| porphobilinogen deaminase [Verrucosispora maris AB-18-032] gi|328813265|gb|AEB47437.1| porphobilinogen deaminase [Verrucosispora maris AB-18-032] Length = 336 Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 104/326 (31%), Positives = 166/326 (50%), Gaps = 28/326 (8%) Query: 1 MEKK----PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLT 56 M ++ P R+GTR S LA+A + +L P + ++ + T GDR ++ + Sbjct: 1 MSQRQPSGPLRLGTRGSKLAMAQSGHVAEALTARTGRP---VELVEVITAGDR-SSAPVH 56 Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116 +G G+F + L++ EID AVHS KD+PT + GL I+A PRED RD ++ + Sbjct: 57 RLG-VGVFVSALRDALVAREIDFAVHSYKDLPTAMPAGLHIAAVPPREDPRDALVARDGR 115 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYA 174 +L +LA + IGT +LRR A L +SV RG I+TRL ++ + AI+LA A Sbjct: 116 TLAELAPGASIGTGALRRIAQLHALGMQLSVSPIRGNIDTRLARVLGPDADLDAIVLARA 175 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G+ R+ + VI E L+ P+P QGA+ +E V++P+ EL+ ++H + +V ER Sbjct: 176 GLARIGRLDVITETLDPMLMLPAPAQGALAVECRVDDPEMVELLGTLDHAASRATVTAER 235 Query: 235 AFLAELDGSCKS------------AIAGFAYCKGS---TLYFYGIVLASDGKIFHEVSRN 279 A LA L+ C + + +G +Y G V++ DG +SR Sbjct: 236 AMLATLEAGCSAPVAAYAVVAEGEPTG--SGVEGDVVQEIYLRGAVISPDGSRDIRLSRT 293 Query: 280 GNRCDAINIGRDAAQYIRFISNKNVF 305 G DA IG+ A + + ++ Sbjct: 294 GTLADAAEIGKALATELLDLGADSIL 319 >gi|256820282|ref|YP_003141561.1| porphobilinogen deaminase [Capnocytophaga ochracea DSM 7271] gi|256581865|gb|ACU93000.1| porphobilinogen deaminase [Capnocytophaga ochracea DSM 7271] Length = 288 Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 95/296 (32%), Positives = 146/296 (49%), Gaps = 10/296 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 RIGTR S LAL A ++ L + + I+ + GD ++ L E+G G Sbjct: 1 MNTIRIGTRDSELALWQAKTVQNQLKTL----GYPTEIVSTKSHGDIELSKPLYEMGVTG 56 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT+ ++ L++GEID AVHS KD+PT L +G+ + A L R + DV + S + Sbjct: 57 IFTKALDIALLNGEIDIAVHSMKDVPTALPEGIAVGAVLKRGNPHDVLVYKGDLSFLEAE 116 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + + I TSSLRRKA L ++ RG + TRL KL +N + + A AG++R+ K Sbjct: 117 I-ATIATSSLRRKAQWLHRYPHHNIESLRGNVNTRLQKLTDNPWNGAIFAAAGLERINKL 175 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 L ++ P+P QGAI + +N Q+ + ++ + T+ + ER FL L+G Sbjct: 176 PEKH--LVLDWMLPAPAQGAIVVVVREDNVALQKKLLPLHDDYTYIATQLERDFLRALEG 233 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNRCDAINIGRDAAQYIR 297 C + I FA K LYF G + + DGK + G A I+ Sbjct: 234 GCTAPIGAFAEFKDDKLYFKGGLWSEDGKEASVIDEVLTQIDEYT--GEKLATMIK 287 >gi|258651772|ref|YP_003200928.1| porphobilinogen deaminase [Nakamurella multipartita DSM 44233] gi|258554997|gb|ACV77939.1| porphobilinogen deaminase [Nakamurella multipartita DSM 44233] Length = 305 Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 94/306 (30%), Positives = 150/306 (49%), Gaps = 5/306 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + R+GTR S LALA + V ++ + ++ + T+GD T L IGG Sbjct: 1 MSSRVLRVGTRGSALALAQSGMIADR---VARLAGATVELVRIRTEGDVNTG-PLATIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L+ G D VHS KD+PT +G+ ++A RE D + L D Sbjct: 57 TGVFVTGVREALLDGRADIVVHSYKDLPTAPTEGITVAAVPERESPFDALCARDGLRLDD 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S +GT S RR A LL R D++V+ RG ++TRL +++ A++LA AG+ RL Sbjct: 117 LPRGSTVGTGSPRRAAQLLARRPDLAVVPIRGNVDTRLRQVSEGHLDAVVLAAAGLNRLG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNP-KAQELVKVINHEDTWDSVNCERAFLAE 239 + I ++L+ + P+P QGA+ +E E + ++ T +V ER L + Sbjct: 177 RADAITDVLDADRMLPAPAQGALAVECRSGADTWFTEATRTLDDAPTRAAVVAERVLLRD 236 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+ C + + FA +G L +V+A DG V R G+ A ++G AA + Sbjct: 237 LEAGCSAPVGAFAQVQGDALTLRAVVVAVDGSSEFRVHRAGSPAAAADLGARAAADLIGQ 296 Query: 300 SNKNVF 305 + Sbjct: 297 GAAGLL 302 >gi|57239097|ref|YP_180233.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden] gi|58579044|ref|YP_197256.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden] gi|57161176|emb|CAH58090.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden] gi|58417670|emb|CAI26874.1| Porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden] Length = 299 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 112/300 (37%), Positives = 166/300 (55%), Gaps = 5/300 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +GTR S LA+A A E + L + P N+ I+ + T GD +L+EIGG Sbjct: 1 MNSMNVYVGTRGSILAIAQAMEVKKLL--YNYFPDINVQIVHIVTSGDINDKISLSEIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L++G ID AVHS KD+P L I L R DVFIS QSL+ Sbjct: 59 KGLFLKELEEALLTGTIDLAVHSMKDVPAFYCDSLVIPCILKRSSPYDVFISSKYQSLRS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++VIGTSS+RRK L+R S + V+ RG ++TR+ KL + I+LA AG+ R+ Sbjct: 119 LPDNAVIGTSSIRRKVQLMRLLSSVQVVPIRGNVDTRILKLEAGQYDGIILAKAGLMRIN 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K VIKE+L+ + + GQGAI I+ N+ K +++K++N + ++ SV ER+F+ + Sbjct: 179 KTHVIKEVLDPQVMLSAVGQGAIGIQCRANDYKMIDMIKILNCKKSYISVAAERSFMKTV 238 Query: 241 DGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +GSC + +A A Y TLY ++ + N CDA G + + Sbjct: 239 NGSCDTPLAALAKYVNSDTLYMSCMLSNE--EKTVFSDCYFNECDAEISGINMGNDLMDQ 296 >gi|237740509|ref|ZP_04570990.1| porphobilinogen deaminase [Fusobacterium sp. 2_1_31] gi|229422526|gb|EEO37573.1| porphobilinogen deaminase [Fusobacterium sp. 2_1_31] Length = 301 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 110/304 (36%), Positives = 147/304 (48%), Gaps = 7/304 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT--LTEIG 59 K+ IG+R S LALA A ++SL + P I + T GD+ + Sbjct: 1 MKRHVVIGSRGSILALAQASLVKNSLEANY--PDLTFEIKEIVTSGDKDLKSNWENSNAS 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV IS L Sbjct: 59 LKSFFTKEIEQELLDGQIDIAVHSMKDMPAVSPKGLICGAIPDREDARDVLISKNG-FLV 117 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + IGTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 118 TLPQGAKIGTSSLRRVMNLKAIRPDFEIKHLRGNIHTRLKKLETEDYDAIILAAAGLKRT 177 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I E L+ E FPP+P QG + I+ N+ + + ++K I++ED V ER F Sbjct: 178 GMADKITEYLSGEAFPPAPAQGVLYIQCRENDEEIKGILKSIHNEDIAKIVEIEREFSKI 237 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DG C + + ++ + F + DGK V + I AA+ I+ Sbjct: 238 FDGGCHTPMGCYSQVDEDKIKFIAA-YSHDGKQ-IRVVIEDDLTKGKEIAHMAAEEIKAK 295 Query: 300 SNKN 303 NK Sbjct: 296 INKG 299 >gi|300856363|ref|YP_003781347.1| porphobilinogen deaminase [Clostridium ljungdahlii DSM 13528] gi|300436478|gb|ADK16245.1| porphobilinogen deaminase [Clostridium ljungdahlii DSM 13528] Length = 290 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 101/293 (34%), Positives = 150/293 (51%), Gaps = 6/293 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F+I TR S LA L + + + T GD+ + L +IGGKGLF Sbjct: 3 FKIATRKSKLAQTQTEIVMDILQKDYNA---KCEKVLIETMGDKRLDIALNKIGGKGLFL 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L+ E D AVHS KD+P + + +I+A + RED+RD F+S +L + Sbjct: 60 KEIELALLKDEADAAVHSMKDVPFDVPEDFEIAAIMQREDVRDAFVSKDKVPFDELPKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR L R DI + RG I+TR++K+ + I+LA AGIKR E+++ Sbjct: 120 KIGTSSNRRAEQLKILRPDIEIAPIRGNIQTRISKIESQNLDGIVLAAAGIKRSHLEELV 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E +ED P+ GQGA+ IET + K + ++ E+T V ER+F+ L+G C Sbjct: 180 TEYFKVEDMVPAIGQGALGIETK-KDSKNKSFFSKLDDENTRICVEAERSFMRTLNGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 S I +A T+ G+ + G + GN+ D + +G A+ I Sbjct: 239 STIGAYAKIDKDTINIMGMFMV--GNKLIKKDVTGNKEDYMVLGEKLAKMILK 289 >gi|325954067|ref|YP_004237727.1| porphobilinogen deaminase [Weeksella virosa DSM 16922] gi|323436685|gb|ADX67149.1| porphobilinogen deaminase [Weeksella virosa DSM 16922] Length = 306 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 91/309 (29%), Positives = 140/309 (45%), Gaps = 16/309 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RIGTR SPLAL A + + L I IIP+ ++GD + + +G G Sbjct: 1 MKKIRIGTRQSPLALWQANKVAALLSKK----GCEIEIIPIKSEGDLNLKQPIYSLGITG 56 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT+ ++ L++ +ID AVHS KD+PT L +GL + A+ R + D+ + + Sbjct: 57 VFTKSLDIALLNNKIDIAVHSLKDVPTVLPEGLALKAFPERANSSDILVYKSNDIF--TK 114 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK- 181 H I T SLRR+A L + +++D RG ++ RL KL +N + A AG+ R + Sbjct: 115 THRTIATGSLRRRAFWLHRYPEDTLVDLRGNVQLRLQKLQDNDWDGAIFAMAGLDRSEII 174 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 E I+ +P QG + + + IN+E+ ER FL Sbjct: 175 ADLENRKLHYSTIDWMLAAPSQGILGVVAREDFDFPS-----INNEECELYATVERQFLN 229 Query: 239 ELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 L+G C + I F G +L+ DGK EV NR + GR A+ Sbjct: 230 VLEGGCTAPIGALVSPLSADMYRFQGTILSLDGKEKIEVVDQFNRSEYKEFGRKMAEKCL 289 Query: 298 FISNKNVFN 306 K + + Sbjct: 290 EQGAKQLID 298 >gi|169631071|ref|YP_001704720.1| porphobilinogen deaminase [Mycobacterium abscessus ATCC 19977] gi|238054424|sp|B1MHI5|HEM3_MYCA9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|169243038|emb|CAM64066.1| Porphobilinogen deaminase (HemC) [Mycobacterium abscessus] Length = 306 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 92/309 (29%), Positives = 138/309 (44%), Gaps = 15/309 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L H ++ ++T GD + E G G+FT Sbjct: 2 IRIGTRGSLLATTQAGGIRDALRAK----GHEAELVIVTTAGD--QSAAPVEQIGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + +D AVHS KD+PT I A PRED RD ++ L +L S Sbjct: 56 AALREAIADDVVDVAVHSYKDLPTAADPRFVIPAIPPREDYRDALVARDGLVLGELPAGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS RR A L + + RG ++TRL++++N +++A AG+ R+ + I Sbjct: 116 VIGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLSRVSNGDLDGVVVARAGLARIGRLDHI 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L P+P QGA+ +E ++ ++H DT +V ERA LAEL+ C Sbjct: 176 TETLEPVQVLPAPAQGALAVECRSEATDLVAVLAELDHADTRAAVTAERALLAELEAGCT 235 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G A DG S G A +G A+ + Sbjct: 236 APVGAIAEVVESIDEEGRVFDELSLRGCAAALDGSDVIRASGIGTPDRAAELGLAVAREL 295 Query: 297 RFISNKNVF 305 + + + Sbjct: 296 LDLGARALI 304 >gi|296394051|ref|YP_003658935.1| porphobilinogen deaminase [Segniliparus rotundus DSM 44985] gi|296181198|gb|ADG98104.1| porphobilinogen deaminase [Segniliparus rotundus DSM 44985] Length = 308 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 97/310 (31%), Positives = 154/310 (49%), Gaps = 16/310 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA A R ++ + + ++ ++T GD+ ++ +TEIG G+FT Sbjct: 2 IRVGTRGSLLATTQAATVRDAIRSL----GESAELVIVATVGDK-SSGPITEIG-VGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + LI+GEID AVHS KD+PT + A R D DV +S + L +L S Sbjct: 56 SALRDALIAGEIDIAVHSLKDLPTAQDPRFSLVAVPERADPSDVLVSRSGLPLAELPPGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT + RR A L R+D+ + RG ++TR+ K+ + AI++A AG+ RL +E+ Sbjct: 116 TVGTGAPRRAAQLRLARADLEIQPIRGNLDTRMRKVATAECDAIVVARAGLLRLGREQEA 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKA-QELVKVINHEDTWDSVNCERAFLAELDGSC 244 E+L+ P+PGQGA+ +E + P + E + ++HE + + ERA LAEL C Sbjct: 176 TEVLHPAVMLPAPGQGALAVECRSDAPASLTETLAKLDHEHSRAASAAERAVLAELSAGC 235 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---------CDAINIGRDAAQY 295 + A G TL V+A DG + A+ +GR A+ Sbjct: 236 SGPVGALARMTGQTLRVEASVIAIDGSRSVRAHAETSVLGTELLSQEQHAVALGRRVAES 295 Query: 296 IRFISNKNVF 305 +R + + Sbjct: 296 LRSMGAMELI 305 >gi|294785256|ref|ZP_06750544.1| hydroxymethylbilane synthase [Fusobacterium sp. 3_1_27] gi|294486970|gb|EFG34332.1| hydroxymethylbilane synthase [Fusobacterium sp. 3_1_27] Length = 302 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 106/304 (34%), Positives = 146/304 (48%), Gaps = 7/304 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT--LTEIG 59 KK IG+R S LALA A + L P I + T GD+ ++I Sbjct: 1 MKKNIIIGSRGSILALAQANLIKDKLQ--INYPNLTFTIKEIVTSGDKDLKSNWENSDIS 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L Sbjct: 59 LKSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLV 117 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 118 TLPQGAKVGTSSLRRAMNLKTVRPDFEIKHLRGNIHTRLKKLETEDYDAIVLAAAGLKRT 177 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I E L+ E FPP+P QG + I+ N+ + ++++K I+++ V ER F Sbjct: 178 GMTDKITEYLSGEVFPPAPAQGVLYIQCRENDEEIKKILKSIHNKAVAKIVEIEREFSKI 237 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DG C + + ++ G + F + L GK + + I A + I+ Sbjct: 238 FDGGCHTPMGCYSQINGDKIKFTAVYLDE-GKQ-IKAVVEDDLTKGKEIAYMATEEIKNK 295 Query: 300 SNKN 303 NK Sbjct: 296 INKG 299 >gi|255324252|ref|ZP_05365374.1| hydroxymethylbilane synthase [Corynebacterium tuberculostearicum SK141] gi|311740973|ref|ZP_07714798.1| hydroxymethylbilane synthase [Corynebacterium pseudogenitalium ATCC 33035] gi|255298768|gb|EET78063.1| hydroxymethylbilane synthase [Corynebacterium tuberculostearicum SK141] gi|311303775|gb|EFQ79853.1| hydroxymethylbilane synthase [Corynebacterium pseudogenitalium ATCC 33035] Length = 295 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 90/298 (30%), Positives = 140/298 (46%), Gaps = 8/298 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LA A R L+D + + ++T GD + IG G+FT+ Sbjct: 4 IGTRGSKLATTQAGHVRDWLIDA----GFDSQLHIVTTAGDVNM-APVERIG-VGVFTQA 57 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 + + L +GE D AVHS KD+PT + ++ R+D R+ ++ SL L + + Sbjct: 58 LREALYAGECDIAVHSFKDLPTAPDERFRL-VVPQRQDSREALVARDGLSLAQLPQGARV 116 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTS+ RR + L R D+ + RG I+TR++K+ + + A+LLAYAG+ R E Sbjct: 117 GTSAPRRISQLAALRPDLEIRPLRGNIDTRMSKVTDGELDAVLLAYAGLLRGGYADRATE 176 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 I F P+P QGA+ IE A L I + + ERA LA L+ C + Sbjct: 177 IFEPSVFMPAPAQGALAIEAVAGTEAAAALDA-IVDDRASAAAAGERAVLARLEAGCTAP 235 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +A + G L G V A DG + +G+ +A ++G + + + Sbjct: 236 VAATSRWDGDQLTVRGGVFALDGSRQLTATASGSAAEAADLGARISDELFAGGAAELL 293 >gi|237742175|ref|ZP_04572656.1| porphobilinogen deaminase [Fusobacterium sp. 4_1_13] gi|229429823|gb|EEO40035.1| porphobilinogen deaminase [Fusobacterium sp. 4_1_13] Length = 302 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 107/304 (35%), Positives = 146/304 (48%), Gaps = 7/304 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT--LTEIG 59 KK IG+R S LALA A + L P I + T GD+ ++I Sbjct: 1 MKKNIIIGSRGSILALAQANLIKDKLQ--INYPNLTFTIKEIVTSGDKDLKSNWENSDIS 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 K FT+EIE++L+ G+ID AVHS KDMP KGL A RED RDV +S L Sbjct: 59 LKSFFTKEIEQELLDGDIDIAVHSMKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLV 117 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + +GTSSLRR L R D + RG I TRL KL AI+LA AG+KR Sbjct: 118 TLPQGAKVGTSSLRRAMNLKTVRPDFEIKHLRGNIHTRLKKLETENYDAIVLAAAGLKRT 177 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I E LN E FPP+P QG + I+ N+ + ++++K I+++ V ER F Sbjct: 178 GLADKITEYLNGEVFPPAPAQGVLYIQCRENDEEIKKILKSIHNKAVAKIVEIEREFSKI 237 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 DG C + + ++ G + F + L GK + + I A + I+ Sbjct: 238 FDGGCHTPMGCYSQINGDKIKFTAVYLDE-GKQ-IKAVVEDDLAKGKEIAHMATEEIKNK 295 Query: 300 SNKN 303 NK Sbjct: 296 INKG 299 >gi|251778553|ref|ZP_04821473.1| hydroxymethylbilane synthase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082868|gb|EES48758.1| hydroxymethylbilane synthase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 290 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 105/295 (35%), Positives = 157/295 (53%), Gaps = 6/295 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 I TR S LA S L I ++I+ T+GDR + +L +IGGKG Sbjct: 1 MNELIIATRKSKLAQVQTEIIMSELKSKFNIDSKKLLIV---TEGDRKLDVSLNKIGGKG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF ++IE L++ E AVHS KD+P ++ +I+A REDIRDVFIS+ S KD+ Sbjct: 58 LFVKDIELALLNKEAHAAVHSMKDVPFEVSSEFEITAITGREDIRDVFISNGDISFKDIK 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSS+RR A L RSD+ ++ RG ++TRL K+ I+LA AG+KRL + Sbjct: 118 KGAKVGTSSIRRAAQLKLLRSDLEIVPIRGNVQTRLKKMEEQNLDGIVLAAAGLKRLGDK 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +I + + ++F P+ QGA+ IE + A + + + + +V ER+F+ EL G Sbjct: 178 NLITDYFDPKEFLPAVSQGALGIECLKDGD-ANKYFEALIDAEATLTVEAERSFMKELQG 236 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C S I ++ KG LY GI G + G + + I +G+ AQ I Sbjct: 237 DCHSLIGAYSEIKGDDLYMIGIY--DIGGKIVKKDILGCKTNNIELGKKLAQKIL 289 >gi|328945742|gb|EGG39893.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1087] Length = 306 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 109/303 (35%), Positives = 163/303 (53%), Gaps = 9/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121 +F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++IGTSS+RR+ L R D++ RG I+TR+ KL + +I+LA AG+KRL Sbjct: 119 PEGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDSIVLAMAGLKRLGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 ++ + L P+ QGA+ +E + + ++L+ + E T V ERA LA Sbjct: 179 LDQSRLHIQPLETSLCLPAISQGALAVECREEDKELRQLLATVQDEKTAAEVAVERAVLA 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +++ C IA A KG ++ DG+ VS G D + A + + Sbjct: 239 QMNADCTFPIAALAQKKGQDYQLEAMLAKEDGQCVF-VSLQG--QDGQELAEQAVRQLAD 295 Query: 299 ISN 301 Sbjct: 296 KGA 298 >gi|261749160|ref|YP_003256845.1| porphobilinogen deaminase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497252|gb|ACX83702.1| porphobilinogen deaminase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 310 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 101/308 (32%), Positives = 146/308 (47%), Gaps = 9/308 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K RIGTR SPLA++ A E + L + + ++GD I N L + Sbjct: 1 MNKIIRIGTRNSPLAISQAIEVQKVLHRLGYCSHLFF----IKSEGDLIQNIPLYKFKKV 56 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-D 120 G+FT + L+SG+ID AVHS KD+PT L + + +SAYL R D+ I + + + Sbjct: 57 GIFTRNLTDVLLSGKIDMAVHSLKDVPTSLPEKIVLSAYLKRGSFSDLLIYQGSSNFLLN 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +VI T SLRR+A +++D RG I TRL KL NN + A G++RL Sbjct: 117 SKIEAVIATGSLRRRAFWKNRYPHHTIVDLRGNINTRLKKLYNNSWKGAIFAKVGLERLG 176 Query: 181 --KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + ++ PSPGQG I + T +N L K ++ +T S N ER FL Sbjct: 177 LLNDLEGFNFKVLDWMIPSPGQGIIVVSTRKDNEWIHYLTKELDDRNTRLSANIERQFLK 236 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L G C + I A K +YF GI+ + DG + G + IG A+ I Sbjct: 237 TLGGGCVTPIGAHAIIKNKIIYFTGILFSLDGMQKIRKKKIGT--NYNVIGYQCAKEILE 294 Query: 299 ISNKNVFN 306 K + Sbjct: 295 EGGKKILE 302 >gi|187778036|ref|ZP_02994509.1| hypothetical protein CLOSPO_01628 [Clostridium sporogenes ATCC 15579] gi|187774964|gb|EDU38766.1| hypothetical protein CLOSPO_01628 [Clostridium sporogenes ATCC 15579] Length = 295 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 104/294 (35%), Positives = 153/294 (52%), Gaps = 6/294 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LA SL H + + T GD+I +L +IGGKGLF Sbjct: 8 FVIATRRSKLAQVQTEIIIDSLNKKH---DIECEKLLIETIGDKILEVSLDKIGGKGLFV 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL + Sbjct: 65 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLREGA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I Sbjct: 125 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ GQGA+ IE +PK EL K ++H ++ V ERAF+ ELDG C Sbjct: 185 TDYFDTKEMVPAIGQGALGIEVMEEHPKK-ELFKDLDHYNSKICVLAERAFMRELDGDCH 243 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S I +A K + ++ GI + + G + +G A++I Sbjct: 244 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGIALAEHILKD 295 >gi|187933878|ref|YP_001887094.1| porphobilinogen deaminase [Clostridium botulinum B str. Eklund 17B] gi|254800243|sp|B2TPD7|HEM3_CLOBB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|187722031|gb|ACD23252.1| hydroxymethylbilane synthase [Clostridium botulinum B str. Eklund 17B] Length = 290 Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 104/295 (35%), Positives = 156/295 (52%), Gaps = 6/295 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 I TR S LA L I ++I+ T+GDR + +L +IGGKG Sbjct: 1 MNELIIATRKSKLAQVQTEIIMGKLKSKFNIDSKKLLIV---TEGDRKLDVSLNKIGGKG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF ++IE L++ E AVHS KD+P ++ +I+A REDIRDVFIS+ S KD+ Sbjct: 58 LFVKDIELALLNKEAHAAVHSMKDVPFEVSSEFEITAITGREDIRDVFISNGDISFKDIK 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTSS+RR A L RSD+ ++ RG ++TRL K+ I+LA AG+KRL E Sbjct: 118 KGAKVGTSSIRRAAQLKLLRSDLEIVPIRGNVQTRLKKMEEQNLDGIVLAAAGLKRLGDE 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 +I + + ++F P+ QGA+ IE + A + + + + +V ER+F+ EL G Sbjct: 178 NLITDYFDPKEFLPAVSQGALGIECLKDGD-ANKYFEALIDAEATLTVEAERSFMKELQG 236 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C S I ++ +G LY GI G + G + + I +G+ AQ I Sbjct: 237 DCHSLIGAYSEIQGDDLYMIGIY--DIGGKIVKKDILGCKTNNIELGKKLAQKIL 289 >gi|332360583|gb|EGJ38393.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1056] Length = 306 Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 109/303 (35%), Positives = 162/303 (53%), Gaps = 9/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKAIH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121 +F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L +L Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLANL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 119 PEGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 ++ + L P+ QGA+ +E + + + L+ + E T V ERA LA Sbjct: 179 LDQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLATVQDEKTAAEVAVERAVLA 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +++ C IA FA G ++ DG+ VS G D + A + + Sbjct: 239 QMNADCTFPIAAFAQKNGQNYQLEAMLAKEDGQCVF-VSLQG--QDGQQLAEQAVRQLAD 295 Query: 299 ISN 301 Sbjct: 296 KGA 298 >gi|32474491|ref|NP_867485.1| porphobilinogen deaminase [Rhodopirellula baltica SH 1] gi|39931387|sp|Q7UPN0|HEM3_RHOBA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|32445029|emb|CAD75031.1| porphobilinogen deaminase [Rhodopirellula baltica SH 1] Length = 337 Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 95/324 (29%), Positives = 149/324 (45%), Gaps = 29/324 (8%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR SPLA+ A L I+PL +KGD R + GLFT Sbjct: 12 LRIATRESPLAMWQAEHVAKLLKKH----GFQTEIVPLVSKGDTDM-RPIDGTRQVGLFT 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL---- 121 + I++ L+ E D AVHS KD+PT+ ++A PRE + D + + Sbjct: 67 KRIQQALVDDEADVAVHSLKDLPTEPDSRFVLAAVPPRESVLDALVFADNSPHLESQTGA 126 Query: 122 -------ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 + +GT S RR A L + R D+ V+ RG ++TRL KLN + AI+LA+A Sbjct: 127 ESPLDYLPQGARVGTGSTRRLAQLKQLRPDLEVLPIRGNVQTRLAKLNAGEFDAIVLAHA 186 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 GI RL+ + + +++ P+PGQGA+ IE ++ A + + +N + ER Sbjct: 187 GILRLEMTDLPHRLFPLDEMIPAPGQGALGIEVRSDDAGAMDAIANLNDAAARLAATAER 246 Query: 235 AFLAELDGSCKSAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNG---------N 281 L+EL G C + IA A + G+ L IV+++DG+ + + Sbjct: 247 KVLSELHGGCLAPIACHAKLETSNHGTELCLRAIVMSADGEQRLQEDARITVQPNDADLH 306 Query: 282 RCDAINIGRDAAQYIRFISNKNVF 305 +A +G A+ +R + Sbjct: 307 VAEAHELGTLVAKRLRDKGADKLI 330 >gi|325696921|gb|EGD38808.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK160] Length = 306 Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 110/303 (36%), Positives = 163/303 (53%), Gaps = 9/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKALH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121 +F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q L DL Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQKLADL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 119 PEGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 ++ + L P+ QGA+ +E + + ++L+ + + T V ERA LA Sbjct: 179 LDQSRLHIQPLETSLCLPAISQGALAVECREEDEELRQLLATVQDDKTAAEVAVERAVLA 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +++ C IA FA KG ++ DG+ VS G D + A + + Sbjct: 239 QMNADCTFPIAAFAQKKGQAYQLEAMLAKEDGQCVF-VSLQG--QDGQELAEQAVRQLAD 295 Query: 299 ISN 301 Sbjct: 296 KGA 298 >gi|271962120|ref|YP_003336316.1| hydroxymethylbilane synthase [Streptosporangium roseum DSM 43021] gi|270505295|gb|ACZ83573.1| Hydroxymethylbilane synthase [Streptosporangium roseum DSM 43021] Length = 306 Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 97/301 (32%), Positives = 154/301 (51%), Gaps = 6/301 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S +A + + L ++ + ++ ++T GD +T LT++GG G+F Sbjct: 7 PLRLGTRRSLMATTQSGLVAARLTELT---GRAVELVGVTTFGD-VTKANLTQLGGTGVF 62 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + KLI GEID AVHS KD+PT + I+A PR+D RD + + L DL Sbjct: 63 VSALRDKLIDGEIDFAVHSLKDLPTTQDPRVVIAAIPPRDDPRDALV--STAKLADLPAG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S +GT S RR A L R D+ + RG +TR+ K+ + + ++LA AG+ RL +E Sbjct: 121 SKVGTGSPRRIAQLRVLRPDLEYVPIRGNADTRIGKVTSGELQGVVLAAAGLGRLGREAE 180 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I ++ +E+ P+PGQGA+ +E + E + V++ T +V ERA L L+ C Sbjct: 181 ISQVFEVEEMLPAPGQGALAVECRADRTDLIEFLSVLDDARTRAAVTAERAVLNALEAGC 240 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + + ++ G L V+A DGK S G +++GRD A + + Sbjct: 241 AAPVGAYSADDGQNLILTAAVVAVDGKRAVRKSTAGTLSAPMDLGRDLAAEMIAEGAGTL 300 Query: 305 F 305 Sbjct: 301 I 301 >gi|90422760|ref|YP_531130.1| porphobilinogen deaminase [Rhodopseudomonas palustris BisB18] gi|90104774|gb|ABD86811.1| hydroxymethylbilane synthase [Rhodopseudomonas palustris BisB18] Length = 326 Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 96/320 (30%), Positives = 150/320 (46%), Gaps = 20/320 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-L 63 P RIGTR S +ALA + L ++ I+ T GD L GGKG Sbjct: 4 PVRIGTRKSIMALAQTEDIARRLSAAAS--ELDVEIVKFETVGDSDQVSKLLPHGGKGGA 61 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKD-- 120 F EI + +G+++ +HS KDMP + GL I A L R+ D + +L+D Sbjct: 62 FVAEIRAAVTAGKLEACMHSLKDMPGNEDTPGLIIGATLSRDPPTDALVLRKGLTLEDLR 121 Query: 121 --LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------------NKA 166 IGT+++RR A R +++VI FRG +TR+ KL+N A Sbjct: 122 KSRGKGYTIGTNAVRRAAYAKRLFPEVNVIHFRGAADTRVRKLDNAEKQRLPDGGHVGPA 181 Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226 A+++A +G++R+ I ++ PS GQG + +E VNN + ++ +++I+ Sbjct: 182 DALIMARSGLERVGFVDRIVHDFTPQEMLPSAGQGIVAVECAVNNWQIRKYLELIDDPVA 241 Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286 S + ER L L+G C S +A F+ KGS + VL +G +F E SR+G Sbjct: 242 RLSCDAEREVLWVLNGHCNSPMAAFSTIKGSEMTLSASVLDEEGGLFIEASRSGPANRPR 301 Query: 287 NIGRDAAQYIRFISNKNVFN 306 +GR A + + Sbjct: 302 ELGRAVALELLDKGAAAIIE 321 >gi|157125875|ref|XP_001654431.1| porphobilinogen deaminase [Aedes aegypti] gi|108873496|gb|EAT37721.1| porphobilinogen deaminase [Aedes aegypti] Length = 534 Score = 202 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 100/293 (34%), Positives = 149/293 (50%), Gaps = 13/293 (4%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++ R+G+R S LAL + L ++ P I ++T GDR+ N++L +IG K Sbjct: 6 KEHVIRVGSRKSELALIQTKHVIACLQKLN--PDVQYEIHTMTTVGDRVLNKSLPKIGEK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+++E L +G +D VHS KD+PT L G+ I A L RED RD + + ++L Sbjct: 64 SLFTKDLEDALRNGGVDFVVHSLKDLPTSLPIGMAIGAVLEREDPRDALVLNEKFRGKTL 123 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176 L SVIGTSSLRR A L R + V D RG + TRL KL+ K I+LA AG+ Sbjct: 124 STLPKGSVIGTSSLRRSAQLARLHPHLVVCDIRGNLNTRLAKLDAEGSKFAGIVLAQAGL 183 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ EK I +++ + + GQGA+ +E N+ ++ + H +T + ER+F Sbjct: 184 VRMGWEKRIDQVIEPSEILYAVGQGALAVECRSNDEYILNMLSKLCHLETQCKILVERSF 243 Query: 237 LAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSRNGNRC 283 L L G C + +A K + L G V + DGK + Sbjct: 244 LKTLGGGCSAPVAVCTSLKRKHDSKSNYLNIQGAVWSLDGKTEIRADDGCSVE 296 >gi|323353345|ref|ZP_08087878.1| hydroxymethylbilane synthase [Streptococcus sanguinis VMC66] gi|322121291|gb|EFX93054.1| hydroxymethylbilane synthase [Streptococcus sanguinis VMC66] Length = 306 Score = 202 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 109/303 (35%), Positives = 162/303 (53%), Gaps = 9/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKAIH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121 +F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L +L Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLANL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 119 PEGALIGTSSIRRQVQLQAQRPDLTFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 ++ + L P+ QGA+ +E + + + L+ + E T V ERA LA Sbjct: 179 LDQSRLHIQTLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLA 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +++ C IA FA G ++ DG+ VS G D + A + + Sbjct: 239 QMNADCTFPIAAFAQKNGQGYQLEAMLAKEDGQCIF-VSLQG--QDGQELAEQAVRQLAD 295 Query: 299 ISN 301 Sbjct: 296 KGA 298 >gi|146338934|ref|YP_001203982.1| porphobilinogen deaminase [Bradyrhizobium sp. ORS278] gi|146191740|emb|CAL75745.1| porphobilinogen deaminase [Bradyrhizobium sp. ORS278] Length = 325 Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 92/324 (28%), Positives = 138/324 (42%), Gaps = 22/324 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + FRIGTR S +ALA E L IP +I I+ T GD L GG Sbjct: 1 MTR--FRIGTRKSTMALAQTEEIARRLQAA--IPSLDIEIVKFETTGDSDQTSKLLTHGG 56 Query: 61 KG-LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIR-DVFISHT---- 114 KG F EI + ++ G++ A+HS KDMP + A L D DV + Sbjct: 57 KGGAFVAEIRRAMLDGKLHAAMHSLKDMPGNEETPGLVIAALLSRDPPGDVLVLRKGLAL 116 Query: 115 AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN---------- 164 KD IGT+++RR A R +I FRG +TR+ KL+N Sbjct: 117 EDFRKDGGRGFKIGTNAVRRAAYARRLFPHAELIHFRGAADTRIRKLDNGELQRMPDGGA 176 Query: 165 --KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 A A+++A +G++R+ + D P+ GQG + +E ++ + + ++ ++ Sbjct: 177 VGPADALIMARSGLERVGLSDRASHEFPVADMLPAVGQGIVAVECPASDFETRRILATVD 236 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 + ER L L+G C S IAGF+ G+ + VL DG F E R G Sbjct: 237 DAAARTCADAEREVLWVLNGHCNSPIAGFSTIDGAQMTLTASVLDEDGGRFIEAQRTGPA 296 Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306 +GR + + Sbjct: 297 DRPRELGRAVGLELLASGAAALIE 320 >gi|50291395|ref|XP_448130.1| hypothetical protein [Candida glabrata CBS 138] gi|55976396|sp|Q6FNR4|HEM3_CANGA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|49527441|emb|CAG61081.1| unnamed protein product [Candida glabrata] Length = 329 Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 94/321 (29%), Positives = 145/321 (45%), Gaps = 17/321 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ IG R S LA+ + R + K P ++ + L T GD+I + L GG Sbjct: 1 MTRESINIGGRRSKLAVVQSNHVRDLVQA--KFPQYDCTVFTLQTLGDQIQFKPLYSFGG 58 Query: 61 KGLFTEEIEKKLIS----GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH--- 113 K L+T+E+E L +D VHS KDMPT L G ++ R D D + Sbjct: 59 KALWTKELEDYLYCEDQEKRLDLIVHSLKDMPTLLPDGFELGCVTKRVDPTDCIVMPRGS 118 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILL 171 + L DL +V+GTSS+RR A L R + RG I TRL KL++ ++L Sbjct: 119 PHRCLADLPEGAVVGTSSVRRSAQLKRKFPHLKYQSVRGNIHTRLEKLDDPEGPFQCLVL 178 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ R+ E I + L+ + + GQGA+ IE + K +++ I ++ Sbjct: 179 ASAGLVRMGLEDRITQRLHSDIMYHAVGQGALGIEIRQGDKKILQILDEIADLESTVCCL 238 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRN----GNRCDA 285 ER+ + L+G C I + T L GIV+ +G + E + R D+ Sbjct: 239 AERSLMRTLEGGCSVPIGVESSYDHKTKKLLLKGIVVNVEGTMAIEDQQEVVVNDIREDS 298 Query: 286 INIGRDAAQYIRFISNKNVFN 306 I G A + K + + Sbjct: 299 IKCGVLLAHKMIKDGAKKILD 319 >gi|134055399|emb|CAK43953.1| unnamed protein product [Aspergillus niger] Length = 346 Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats. Identities = 99/334 (29%), Positives = 143/334 (42%), Gaps = 30/334 (8%) Query: 1 MEKKP------FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT 54 M + R+GTR S LAL A L H P + +GD + Sbjct: 1 MSQNTTTTVQELRLGTRNSKLALVQAEHVSKELTSAH--PGVQFPWQTVVVRGDADKSSP 58 Query: 55 LTEIGG-----KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109 + G K ++TEE+E KL +GE+D VH KDMPT+L + + A + RED D Sbjct: 59 FLKFAGPSDAAKNIWTEEMETKLCAGELDLLVHCLKDMPTRLPETCTLGAIVYREDPTDA 118 Query: 110 FISH-----TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN- 163 + L L SV+GTSS RRKALL + V + RG + TRL KL++ Sbjct: 119 LVIKEGLRSQYTDLSQLPPGSVVGTSSTRRKALLRYRYPHLKVEECRGNLGTRLKKLDDP 178 Query: 164 -NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 AI+LA AG+ R+ E I + L +FP + GQGA+ IE + + + +V+ I Sbjct: 179 EGPFSAIILATAGMVRINLEDRITKRLPPSEFPYAVGQGALGIEIRKEDAQTKTMVRKIE 238 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG-------STLYFYGIVLASDGKIFHE 275 T ER+ L L G C S +A + + L G ++ G Sbjct: 239 DLVTRRICLAERSLLRTLQGGCSSPVAVHCTVEQAPTASSPAQLRLDGTIIHPHGTTLLS 298 Query: 276 VSRN---GNRCDAINIGRDAAQYIRFISNKNVFN 306 G DA +G AQ + + + Sbjct: 299 ERTTAEVGTDEDAEALGATVAQQLLKNGGQALLE 332 >gi|88802327|ref|ZP_01117854.1| porphobilinogen deaminase HemC [Polaribacter irgensii 23-P] gi|88781185|gb|EAR12363.1| porphobilinogen deaminase HemC [Polaribacter irgensii 23-P] Length = 531 Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats. Identities = 97/305 (31%), Positives = 146/305 (47%), Gaps = 10/305 (3%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K RIGTR S LAL A + R L + + V++P+ + GD + L E+G Sbjct: 1 MQKIIRIGTRDSQLALWQANKVRKELAGL----GYESVLVPIKSSGDINLDTPLYEMGIT 56 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT+ ++ L+ G+ID AVHS KD+PT L KG+ +A L R + DV + + + Sbjct: 57 GIFTKSLDIALLEGKIDIAVHSLKDVPTALPKGIVQAAVLKRGNYNDVLVLNGTEEFFGE 116 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIKRLK 180 I T SLRRKA+ L V RG ++TRL KL +K + + A AG++RL Sbjct: 117 EQGL-IATGSLRRKAMWLDRYPTHKVAPLRGNVQTRLEKLETSKTWNGAVFAAAGLERLG 175 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +++ P+P QGAI I + + + INH +T V ER FL L Sbjct: 176 ITPED--TVDLPWMLPAPAQGAIMIAALEKDDFTLDACEQINHHETSVCVGVEREFLRLL 233 Query: 241 DGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +G C + I AY + F ++L DG V++ + +D A Y+ Sbjct: 234 EGGCTAPIGALAYVDARTDEVNFKAVLLKKDGSKKIRVAKTAKFGSHKFLAKDCADYVIN 293 Query: 299 ISNKN 303 K Sbjct: 294 RGGKE 298 >gi|227832129|ref|YP_002833836.1| Porphobilinogen deaminase [Corynebacterium aurimucosum ATCC 700975] gi|262184020|ref|ZP_06043441.1| porphobilinogen deaminase [Corynebacterium aurimucosum ATCC 700975] gi|254800247|sp|C3PKG2|HEM3_CORA7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|227453145|gb|ACP31898.1| Porphobilinogen deaminase [Corynebacterium aurimucosum ATCC 700975] Length = 296 Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats. Identities = 84/300 (28%), Positives = 146/300 (48%), Gaps = 8/300 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LA + + L + + ++T+GD + IG G+FT Sbjct: 2 LKIGTRGSLLATTQSGHVQEWLQQK----GYEAELHIVTTQGDVNM-APVERIG-VGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + + + GE + AVHS KD+PT + + R+D+R+ I+ +LK+L + Sbjct: 56 QALREAVDRGECEIAVHSFKDLPTAADERFDL-VVPQRQDVREALIARDGLTLKELPEGA 114 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTS+ RR + L R D+ + RG I+TR+ K+ + + A+LLAYAG+ R + Sbjct: 115 RVGTSAPRRISQLRAMRPDLDIRPLRGNIDTRMGKVTSGELDAVLLAYAGLVRAGYAERA 174 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+ + E F P+P QGA+ IE +A + + ++ + ER L++L+ C Sbjct: 175 TEVFDPEVFMPAPAQGALAIEAV-KGTEAAKAIALLADGPATAATRAERTVLSQLEAGCT 233 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + +A ++ +G L G V A DG G +A +GR ++ + +V Sbjct: 234 APVAATSHWEGEQLVVRGGVFALDGSRQLIAQAQGAASEAEELGRAVSKELFAQGAADVL 293 >gi|304320177|ref|YP_003853820.1| porphobilinogen deaminase [Parvularcula bermudensis HTCC2503] gi|303299080|gb|ADM08679.1| porphobilinogen deaminase [Parvularcula bermudensis HTCC2503] Length = 324 Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 111/283 (39%), Positives = 154/283 (54%), Gaps = 4/283 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN----IVIIPLSTKGDRITNRTLT 56 M KP RI +R SPLA+A A R L + I + T GDR+ N TL Sbjct: 1 MSFKPLRIASRRSPLAVAQALWVRDRLAEALGIDEVDRDAAFPHETFVTTGDRMLNPTLA 60 Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ 116 +IGGKGLFT+EIE L+ G+ D AVHS KDMP ++ GL ++A RED RD F++ + Sbjct: 61 DIGGKGLFTKEIEIALLDGQADIAVHSMKDMPAQMPPGLVLAAVPVREDPRDAFVTLDGR 120 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + + IGTSS RR+A L R R D++++ RG + TRL KL +A LA AG+ Sbjct: 121 PLDQMPAGARIGTSSTRRRAQLARLRPDLALVPMRGNVGTRLQKLAAGEAEGTFLAEAGL 180 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 +RL V +E L+ P+ GQGA+C++ + + IN+ T + ERA Sbjct: 181 RRLGMTDVKREALSPARMLPALGQGALCVQARSGDHETLSACAHINNRPTALAAAAERAL 240 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 ++ LDGSCK+ I G A G +L G +L DG+ R Sbjct: 241 ISGLDGSCKTPIGGLARQTGDSLILEGQILTPDGRRVLRGERT 283 >gi|213964237|ref|ZP_03392470.1| porphobilinogen deaminase [Capnocytophaga sputigena Capno] gi|213953127|gb|EEB64476.1| porphobilinogen deaminase [Capnocytophaga sputigena Capno] Length = 293 Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 98/298 (32%), Positives = 154/298 (51%), Gaps = 9/298 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RIGTR S LAL A + L + ++ I+ + GD ++ L E+G G Sbjct: 1 MKTIRIGTRDSELALWQAKTVQHQLEAL----GYSTEIVSTKSHGDIELSKPLYEMGVIG 56 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT+ ++ L++GEID AVHS KD+PT L G+ + A L R + DV + S D+ Sbjct: 57 IFTKALDIALLNGEIDIAVHSMKDVPTALPDGIVVGAVLKRGNPHDVLVYKGDLSFLDVE 116 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + + I TSSLRRKA L ++ + RG + TRL KL +N + + A AG++R+ K Sbjct: 117 I-ATIATSSLRRKAQWLHRYPHHNIENLRGNVNTRLQKLADNPWNGAIFAAAGLERINKL 175 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 L ++ P+P QGAI + H +N Q ++ I+ +T+ + ERAFL L+G Sbjct: 176 PEN--HLRLDWMFPAPAQGAIMVTLHEDNVPLQGVLLRIHDGNTYVATQVERAFLRALEG 233 Query: 243 SCKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 C + I FA G +YF G + + DGK + + + + G A+ ++ Sbjct: 234 GCTAPIGAFAQYDGQQKVYFKGGLWSEDGKKAAVIEEILTQIN-EHTGEQLAEKVKSK 290 >gi|229586831|ref|YP_002845332.1| porphobilinogen deaminase [Rickettsia africae ESF-5] gi|259646263|sp|C3PNS9|HEM3_RICAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|228021881|gb|ACP53589.1| Porphobilinogen deaminase [Rickettsia africae ESF-5] Length = 351 Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 100/257 (38%), Positives = 149/257 (57%), Gaps = 4/257 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR SPLAL H + P N I+P+ T GD I N+ L +IGG Sbjct: 1 MTN-SIRIGTRKSPLALIHTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K LF +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++ Sbjct: 58 KALFLKEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEE 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+ Sbjct: 118 LPQNAVIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLE 177 Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 ++ P GQG I +E ++ E+ INH T++ + ERAFL Sbjct: 178 VFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFLEY 237 Query: 240 LDGSCKSAIAGFAYCKG 256 LD +C++ IA ++ Sbjct: 238 LDANCRTPIAAYSQYLD 254 >gi|119713318|gb|ABL97382.1| porphobilinogen deaminase [uncultured marine bacterium EB80_02D08] Length = 300 Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 97/301 (32%), Positives = 143/301 (47%), Gaps = 4/301 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +I TR S LA+ A + + I + +IP++++GD+ TN+ L EIGGKGLF Sbjct: 2 KIKIATRQSELAMYQANFVANEIKK--SIKDVEVELIPMTSEGDQ-TNKPLHEIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E L S ++D AVHS KD+P +L +I RE D+ +S +S D + Sbjct: 59 ISTLESALESNKVDIAVHSLKDVPARLDPKFKIINVFKRESPSDLLLSKDGKSFSDFLEN 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGTS RRKA + R DI I RG I TR+NKLN +++A A I RL ++ Sbjct: 119 ATIGTSGPRRKAQINYLRPDIKTIPVRGNIATRINKLNEGYFDGLVVAKAAINRLGLQQN 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E +I++ P+ QG I E +N + E ++ I N ER+F+A +DG C Sbjct: 179 SYE-FSIDEMLPAASQGHIATECLSSNKEIIETLESIGDSKELILANAERSFVASMDGGC 237 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 S IA + G VL+ G N + D A K++ Sbjct: 238 LSPIAILCQNFNDEIKVIGKVLSYKGDKLIYKKMNSSFKDIDKDIISFADEFILEGAKSL 297 Query: 305 F 305 Sbjct: 298 I 298 >gi|58617102|ref|YP_196301.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Gardel] gi|58416714|emb|CAI27827.1| Porphobilinogen deaminase [Ehrlichia ruminantium str. Gardel] Length = 299 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 111/300 (37%), Positives = 166/300 (55%), Gaps = 5/300 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +GTR S LA+A A + + L + P N+ I+ + T GD +L+EIGG Sbjct: 1 MNSMNVYLGTRGSILAIAQAMKVKKLL--YNYFPDINVQIVHIVTSGDINDKISLSEIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E+ L++G ID AVHS KD+P L I L R DVFIS QSL+ Sbjct: 59 KGLFLKELEEALLTGTIDLAVHSMKDVPAFYCDSLVIPCILKRSSPYDVFISSKYQSLRS 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++VIGTSS+RRK L+R S + V+ RG ++TR+ KL + I+LA AG+ R+ Sbjct: 119 LPDNAVIGTSSIRRKVQLMRLLSSVQVVPIRGNVDTRILKLEAGQYDGIILAKAGLMRIN 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K VIKE+L+ + + GQGAI I+ N+ K +++K++N + ++ SV ER+F+ + Sbjct: 179 KTHVIKEVLDPQVMLSAVGQGAIGIQCRANDYKMIDMIKILNCKKSYISVAAERSFMKTV 238 Query: 241 DGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +GSC + +A A Y TLY ++ + N CDA G + + Sbjct: 239 NGSCDTPLAALAKYVNSDTLYMSCMLSNE--EKTVFSDCYFNECDAEISGINMGNDLMDQ 296 >gi|198462481|ref|XP_001352446.2| GA21587 [Drosophila pseudoobscura pseudoobscura] gi|198150842|gb|EAL29942.2| GA21587 [Drosophila pseudoobscura pseudoobscura] Length = 630 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 98/300 (32%), Positives = 147/300 (49%), Gaps = 18/300 (6%) Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M +K R+G+R S LAL L ++ P I +ST GDR+ N +L +I Sbjct: 1 MSAQEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQRFEIHTMSTFGDRVLNVSLPKI 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + Sbjct: 59 GEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFQG 118 Query: 119 KDL---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAY 173 + SVIGTSSLRR A + R + V D RG + TRL KL+ +++ I+LA Sbjct: 119 HTIASLPQGSVIGTSSLRRTAQIRRLYPHLIVCDIRGNLNTRLAKLDAADSRFAGIILAQ 178 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG+ R+ I ++L D + GQGA+ +E N+ + +++ + +T + E Sbjct: 179 AGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDVQVLAMLQKLMCLNTTCRILAE 238 Query: 234 RAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCD 284 R+FL L G C + +A ++ +G L G V + DG I + + Sbjct: 239 RSFLKTLGGGCSAPVAVWSNLQGEPLNANSQDVGLSLTGAVWSLDGAIEIRNHLSCALSE 298 >gi|134103372|ref|YP_001109033.1| porphobilinogen deaminase [Saccharopolyspora erythraea NRRL 2338] gi|291004409|ref|ZP_06562382.1| porphobilinogen deaminase [Saccharopolyspora erythraea NRRL 2338] gi|133915995|emb|CAM06108.1| porphobilinogen deaminase [Saccharopolyspora erythraea NRRL 2338] Length = 315 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 95/310 (30%), Positives = 145/310 (46%), Gaps = 19/310 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K RIGTR S LA+A +L + ++ +ST GDR + EIG Sbjct: 1 MNKTLRIGTRGSALAMAQTSWVAEALEKA----GYRTELVTVSTPGDRSM-APIAEIG-V 54 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT + L GE+D AVHS KD+PT L ++A RED RD ++ +L +L Sbjct: 55 GVFTSALRDALADGEVDVAVHSYKDLPTAPDPRLSLAAVPVREDPRDALVARDGLTLGEL 114 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SV+GT S RR L + V D RG ++TR+ K+ + + A++LA AG+ R+ + Sbjct: 115 PPGSVVGTGSPRRAGQLKALGLGLEVRDIRGNVDTRMRKVTDGELDAVVLARAGLARVGR 174 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETH-VNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E L+ P+P QGA+ +E + L V++ + + +V ERA LA L Sbjct: 175 LAGITETLDPLQMLPAPAQGALAVECRVDDVDTEHLLQSVLDDQASRVAVAAERAMLAAL 234 Query: 241 DGSCKSAIAGFAYCKGS---------TLYFYGIVLASD--GKI-FHEVSRNGNRCDAINI 288 + C + + A L+ G+V D G++ S G A + Sbjct: 235 EAGCSAPVGALAEVVEDLDADGRVAQRLFVRGVVAVDDASGRVDLLRASVTGETTAAEQL 294 Query: 289 GRDAAQYIRF 298 GR+ A + Sbjct: 295 GRELAAQLLD 304 >gi|327489115|gb|EGF20910.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK1058] Length = 306 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 109/303 (35%), Positives = 162/303 (53%), Gaps = 9/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K ++GTR S LA+ + L +H P + V++P +TKGDR+T+ +L EIGGKG Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVDQLKKLH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS-HTAQSLKDL 121 +F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L +L Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFLQAGQTLANL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 119 PEGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178 Query: 182 ---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 ++ + L P+ QGA+ +E + + + L+ + E T V ERA LA Sbjct: 179 LDQSRLHIQPLETSLCLPAISQGALAVECREEDEELRSLLAAVQDEKTAAEVAVERAVLA 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +++ C IA A KG ++ DG+ VS G D + A + + Sbjct: 239 QMNADCTFPIAALAQKKGQDYQLEAMLAKEDGQCVF-VSLQG--QDGQELAEQAVRQLAD 295 Query: 299 ISN 301 Sbjct: 296 KGA 298 >gi|34581586|ref|ZP_00143066.1| porphobilinogen deaminase [Rickettsia sibirica 246] gi|28262971|gb|EAA26475.1| porphobilinogen deaminase [Rickettsia sibirica 246] Length = 351 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 100/257 (38%), Positives = 149/257 (57%), Gaps = 4/257 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR SPLAL H + P N I+P+ T GD I N+ L +IGG Sbjct: 1 MTN-SIRIGTRKSPLALIHTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K LF +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++ Sbjct: 58 KALFLKEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEE 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+ Sbjct: 118 LPQNAVIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLE 177 Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 ++ P GQG I +E ++ E+ INH T++ + ERAFL Sbjct: 178 VFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFLEY 237 Query: 240 LDGSCKSAIAGFAYCKG 256 LD +C++ IA ++ Sbjct: 238 LDANCRTPIAAYSQYLD 254 >gi|15892629|ref|NP_360343.1| porphobilinogen deaminase [Rickettsia conorii str. Malish 7] gi|20138263|sp|Q92HR5|HEM3_RICCN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|15619798|gb|AAL03244.1| porphobilinogen deaminase [Rickettsia conorii str. Malish 7] Length = 351 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 100/257 (38%), Positives = 149/257 (57%), Gaps = 4/257 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR SPLAL H + P N I+P+ T GD I N+ L +IGG Sbjct: 1 MTN-SIRIGTRKSPLALIHTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K LF +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++ Sbjct: 58 KALFLKEIEQALLDKKIDLAVHSLKDVPGRMPEPLVIAAVLEREDPRDVFVCLKYKSIEE 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+ Sbjct: 118 LPQNAVIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLE 177 Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 ++ P GQG I +E ++ E+ INH T++ + ERAFL Sbjct: 178 VFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFLEY 237 Query: 240 LDGSCKSAIAGFAYCKG 256 LD +C++ IA ++ Sbjct: 238 LDANCRTPIAAYSQYLD 254 >gi|254519530|ref|ZP_05131586.1| porphobilinogen deaminase [Clostridium sp. 7_2_43FAA] gi|226913279|gb|EEH98480.1| porphobilinogen deaminase [Clostridium sp. 7_2_43FAA] Length = 290 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 104/293 (35%), Positives = 165/293 (56%), Gaps = 6/293 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LA A + + + + I ++++ T+GDR + TL +IGGKGLF Sbjct: 3 LIIATRKSKLAQVQADKVIELIKEKNNINAKKLLVV---TEGDRRLDVTLDKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ E AVHS KD+P +L + ++ A R+DIRDVF+S +DL + Sbjct: 60 KEIEYALLNKEAHAAVHSMKDVPFELSEDFELVAIPERDDIRDVFVSSNGIHFQDLKEGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +IGTSS+RR A+L + R D++++ RG ++TRL+K+ I+LA AGIKRL E +I Sbjct: 120 IIGTSSIRRAAMLKKLRGDLNIVPIRGNVQTRLDKMKKENMDGIILAAAGIKRLGLEDII 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++F P+ GQGA+ IE N + +K +++++ +V ER+F+ +L+G C Sbjct: 180 TDYFDPKEFLPAIGQGALGIEALKNG-EYNNYLKKLDNKEVRIAVEAERSFMKKLNGGCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 S I ++ K LY G GK + G + + I +G AQ I Sbjct: 239 SVIGVYSEIKNDDLYMIGT-FDVGGK-IIKKDILGKKSENIELGFKLAQKILE 289 >gi|256810719|ref|YP_003128088.1| porphobilinogen deaminase [Methanocaldococcus fervens AG86] gi|256793919|gb|ACV24588.1| porphobilinogen deaminase [Methanocaldococcus fervens AG86] Length = 292 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 94/297 (31%), Positives = 145/297 (48%), Gaps = 12/297 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + L ++ +++ I + T GDR+ N+ L++IG G+FT Sbjct: 2 IRIGTRGSKLALYQANKVAELLKNL----GYDVEIKIIKTTGDRVLNKKLSDIGI-GVFT 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ +++ EID AVHS KD+PT + L + A L R+ D+ I + D Sbjct: 57 KELDLAMLNNEIDIAVHSLKDIPTIWNENLMVGAVLERDSYYDLLIWNK-NVDFDENSEI 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +IGTSSLRR+A L + RG ++TRL KL + AI+L+ AGI RL Sbjct: 116 IIGTSSLRRRAFLKFLYPNARFELLRGNVDTRLKKLKDGLYDAIVLSEAGIIRLGINLDD 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + P+P QG I + ++ + +E++K INH+ T+ +CERA L + G C Sbjct: 176 FNYKRLNIL-PAPAQGIIAVACKRDDEEIKEILKEINHKKTYLGSSCERAALNQFGGGCS 234 Query: 246 SAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIR 297 A L V+ D D AI +G++ + +R Sbjct: 235 VPFGALAVYDEKNEVLKLNAGVVIEDELKTASGEVKCKIDDIDKAIELGKNIGKKLR 291 >gi|158518657|sp|Q8TXC8|HEM3_METKA RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 298 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 85/301 (28%), Positives = 150/301 (49%), Gaps = 4/301 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + R+ TR S LA+ E L + I+ ++GD + +R L ++G Sbjct: 1 MSE-TIRVATRSSRLAIIQTREVIELLERESPR-DVEVEIVKTKSRGDVVRDRPLHKLGE 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG+F +E+++ ++ G+ D AVHSAKD+P+ + + ++A PR D R+ +S LK+ Sbjct: 59 KGVFVKEVDRLVLEGKADIAVHSAKDVPSVVDYPVDVAAVPPRRDPRECLVSR-HGGLKE 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTSS RR+A +L R D+ V RG ++TR++K+ + A +LA G+ RL Sbjct: 118 LPRGATVGTSSPRRRAQILLERPDLKVEPMRGNVDTRVSKVRRREYDAAVLAKVGLDRLG 177 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + E+ + E+F P GQGA+ I ++ + + L++V++ E + V E+A + EL Sbjct: 178 MTSEVSEVYDPEEFVPPAGQGALMITCRKDDDRVKRLLEVVDDEKSRVEVETEKAVVREL 237 Query: 241 DGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 C + G + + DG H + G+ D + A+ + Sbjct: 238 GVGCSEPVGVHVRARDGDHVRLVLGLFEEDGSCGHVLKMRGSPEDVVREAVSQAREVLSD 297 Query: 300 S 300 Sbjct: 298 G 298 >gi|315223357|ref|ZP_07865216.1| hydroxymethylbilane synthase [Capnocytophaga ochracea F0287] gi|314946688|gb|EFS98677.1| hydroxymethylbilane synthase [Capnocytophaga ochracea F0287] Length = 288 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 94/297 (31%), Positives = 143/297 (48%), Gaps = 10/297 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 RIGTR S LAL A ++ L + + I+ + GD ++ L E+G G Sbjct: 1 MNTIRIGTRDSELALWQAKTVQNQLKTL----GYATEIVSTKSHGDIELSKPLYEMGVTG 56 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT+ ++ L++ EID AVHS KD+PT L +G+ + A L R + DV + S + Sbjct: 57 IFTKALDIALLNSEIDIAVHSMKDVPTALPEGIVVGAVLKRGNPHDVLVYKGDLSFLEAE 116 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + I TSSLRRKA L ++ RG + TRL KL +N + + A AG++R+ K Sbjct: 117 I-VTIATSSLRRKAQWLHRYPHHNIESLRGNVNTRLQKLTDNPWNGAIFAAAGLERINKL 175 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 L ++ P+P QGAI + N Q+ + ++ + T+ + ER FL L+G Sbjct: 176 PEKH--LVLDWMLPAPAQGAIVVVVREANVALQKKLLPLHDDYTYIATQLERDFLRALEG 233 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKI-FHEVSRNGNRCDAINIGRDAAQYIRF 298 C + I FA K LYF G + + DGK + G A +R Sbjct: 234 GCTAPIGAFAEFKDDKLYFKGGLWSEDGKESSVIDEVLTQIDEYT--GEKLATMVRS 288 >gi|222529189|ref|YP_002573071.1| porphobilinogen deaminase [Caldicellulosiruptor bescii DSM 6725] gi|222456036|gb|ACM60298.1| porphobilinogen deaminase [Caldicellulosiruptor bescii DSM 6725] Length = 290 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 97/296 (32%), Positives = 147/296 (49%), Gaps = 6/296 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RIG R S L+ + +P+ TKGD ++L + G Sbjct: 1 MKKLRIGARDSKLSRIQVDIVARKIKQTL---GIECEFVPIKTKGDIDKTKSLKDFQSPG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F +EIE L+S EID AVHS KD+P ++ I A + RED RDV +S L Sbjct: 58 VFVKEIELALLSREIDLAVHSLKDLPCEMDSNFDIVAVVEREDPRDVLVSKDGVGFYQLK 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ IGTSSLRR+ L R DI V++ RG IETRL+K+ + ++LAYA +KRL + Sbjct: 118 PNAKIGTSSLRREVHLKNLREDIQVVNIRGNIETRLSKIESEGLDGVVLAYAALKRLNLD 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + + +I + P PGQGAICIE ++P ++ IN + + ER L L G Sbjct: 178 SHVSYVFDINEITPCPGQGAICIECLEDSPYK-SILSKINDVNAYIQTQFERLVLKLLGG 236 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C S+I F +Y + +L G + S G++ D +++ + ++ Sbjct: 237 GCHSSIGVFCKTDQDKIYAFASLLR--GDKLVKASIEGDKADFLSLANKLSNMLKS 290 >gi|257463595|ref|ZP_05627986.1| porphobilinogen deaminase [Fusobacterium sp. D12] gi|317061149|ref|ZP_07925634.1| porphobilinogen deaminase [Fusobacterium sp. D12] gi|313686825|gb|EFS23660.1| porphobilinogen deaminase [Fusobacterium sp. D12] Length = 301 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 101/301 (33%), Positives = 156/301 (51%), Gaps = 6/301 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL--TEI 58 M K +G+R S LALA + L + P I + T+GD+ +E+ Sbjct: 1 MLKHHIILGSRGSILALAQTNWVKKQLQRHY--PQLTFSIQVIETQGDKDLTSHFGNSEL 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 K FT+EIEK L+ GEID AVHS KD+P+ GL A RED+RDV +S + ++L Sbjct: 59 SLKSFFTKEIEKSLLDGEIDIAVHSMKDVPSSSPVGLICGAIPVREDVRDVLVSTSGKTL 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 DL S++GTSSLRR + + R D+ + RG I TRL KL AI+LA AG+KR Sbjct: 119 ADLPKGSILGTSSLRRIQNIKQLRPDLEIKALRGNIHTRLKKLEEGHYDAIVLAAAGLKR 178 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + E+ I E LN F P+P QGA+ I+ + + + +++ I+ E+ + ER F Sbjct: 179 VGLEEKITEYLNPTVFSPAPAQGALYIQCREKDEETRNILQSIHDENLAKILEIEREFSR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 DG C + + ++ +G ++F+ + + ++ + I AAQ I+ Sbjct: 239 IFDGGCHTPMGCYSKVEGKKIFFHAMYSHK--EKSYQTIITESITKGKEIAIMAAQEIQK 296 Query: 299 I 299 + Sbjct: 297 M 297 >gi|238650859|ref|YP_002916714.1| porphobilinogen deaminase [Rickettsia peacockii str. Rustic] gi|259646264|sp|C4K265|HEM3_RICPU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|238624957|gb|ACR47663.1| porphobilinogen deaminase [Rickettsia peacockii str. Rustic] Length = 351 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 100/257 (38%), Positives = 149/257 (57%), Gaps = 4/257 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR SPLAL H + P N I+P+ T GD I N+ L +IGG Sbjct: 1 MTN-SIRIGTRKSPLALIHTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K LF +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++ Sbjct: 58 KALFLKEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEE 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+ Sbjct: 118 LPQNAVIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLE 177 Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 ++ P GQG I +E ++ E+ INH T++ + ERAFL Sbjct: 178 VFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFLEY 237 Query: 240 LDGSCKSAIAGFAYCKG 256 LD +C++ IA ++ Sbjct: 238 LDANCRTPIAAYSQYLD 254 >gi|157828627|ref|YP_001494869.1| porphobilinogen deaminase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933343|ref|YP_001650132.1| porphobilinogen deaminase [Rickettsia rickettsii str. Iowa] gi|189028152|sp|B0BY00|HEM3_RICRO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189028153|sp|A8GSI6|HEM3_RICRS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157801108|gb|ABV76361.1| porphobilinogen deaminase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908430|gb|ABY72726.1| porphobilinogen deaminase [Rickettsia rickettsii str. Iowa] Length = 351 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 100/257 (38%), Positives = 149/257 (57%), Gaps = 4/257 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR SPLAL H + P N I+P+ T GD I N+ L +IGG Sbjct: 1 MTN-SIRIGTRKSPLALIHTNLVIQQIKQF--FPDINCEIVPIITSGDLIQNKPLYDIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K LF +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++ Sbjct: 58 KALFLKEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEE 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+ Sbjct: 118 LPQNAVIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLE 177 Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 ++ P GQG I +E ++ E+ INH T++ + ERAFL Sbjct: 178 VFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFLEY 237 Query: 240 LDGSCKSAIAGFAYCKG 256 LD +C++ IA ++ Sbjct: 238 LDANCRTPIAAYSQYLD 254 >gi|284161707|ref|YP_003400330.1| porphobilinogen deaminase [Archaeoglobus profundus DSM 5631] gi|284011704|gb|ADB57657.1| porphobilinogen deaminase [Archaeoglobus profundus DSM 5631] Length = 292 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 108/299 (36%), Positives = 161/299 (53%), Gaps = 12/299 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ +GTR S LALA + L + +++ I + + GD + ++ L E G Sbjct: 1 MSER-VVVGTRGSKLALAQTSKVVERLKE----EGYSVEIRIIKSTGDIMKDKPLYEFKG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G F +E L+ GEID AVHS KD+P+ +L+G+ +SA L R+ D FI+ +SL++ Sbjct: 56 SGAFVRALEHALVRGEIDVAVHSYKDIPSNMLEGVTVSAVLERDSPYDAFIARNGESLEE 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + ++VIGTSSLRR+A L +RSD+ + RG ++TRL KL AI+LA AGI+RL Sbjct: 116 IKPNAVIGTSSLRRRAQLKLYRSDLRFENLRGNVDTRLRKLREGLYDAIVLAEAGIQRLG 175 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 V + L IE F P QG I ++T V +LVK +NHE+TW ER + L Sbjct: 176 -LNVKYQRLPIERFVPPANQGIIAVQTRVGEE---DLVKFMNHEETWIEAEVERIVMKTL 231 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 C +A C+G + V+ DG+ F + +R AI R+ A+ R Sbjct: 232 GVGCAIPAGIYAECRG-KVRLIVQVIR-DGREFKVIE-ELSRESAIEEAREIAENFREE 287 >gi|168178318|ref|ZP_02612982.1| porphobilinogen deaminase [Clostridium botulinum NCTC 2916] gi|182670871|gb|EDT82845.1| porphobilinogen deaminase [Clostridium botulinum NCTC 2916] Length = 290 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 102/294 (34%), Positives = 152/294 (51%), Gaps = 6/294 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 F I TR S LA L H + + T GD+I +L +IGGKGLF Sbjct: 3 FIIATRRSNLAQVQTEIIIDLLNKKH---DIKCEKLLIETVGDKILEVSLDKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++IE ++ D AVHS KD+P ++ KG +I A RED+RD FIS KDL + Sbjct: 60 KDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAFISLDNIKFKDLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS RR A L R D+ ++ RG ++TR+ K+ I+LA AG+KR+ + +I Sbjct: 120 KIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGIILAVAGLKRVNLDHLI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + ++ P+ GQGA+ IE +PK +L K ++H ++ V ERAF+ ELDG C Sbjct: 180 TDYFDTKEMVPAIGQGALGIEIMEEHPKK-DLFKDLDHYNSKICVLAERAFMRELDGDCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S I +A K + ++ GI + + G + +G A++I Sbjct: 239 STIGAYASIKDNIMHIIGIFERKN--KIIKKEITGTKDQYEKLGIALAEHILKD 290 >gi|163787007|ref|ZP_02181454.1| porphobilinogen deaminase [Flavobacteriales bacterium ALC-1] gi|159876895|gb|EDP70952.1| porphobilinogen deaminase [Flavobacteriales bacterium ALC-1] Length = 526 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 97/308 (31%), Positives = 153/308 (49%), Gaps = 10/308 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LA+ A +S L + H V++P+ + GD + ++ L E+G Sbjct: 1 MS-KIIRIGTRDSQLAMWQAKTVQSQLEHL----GHKTVLVPVKSTGDLVLDKPLYELGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ +++ +ID AVHS KD+PT L KG+ +A L R +I D + + Sbjct: 56 TGIFTKTLDIAMLNEDIDIAVHSLKDVPTILPKGIVQAAVLKRGNINDTLVYKANEEFLS 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKRL 179 A +VI T SLRR+A L +++ RG + +RL KL N +A + A AG+ RL Sbjct: 116 -ARDAVIATGSLRRRAQWLNRYPTHTIVGLRGNVNSRLEKLETNEDWNAAIFAGAGLGRL 174 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 +N+ P+P QGAI I ++ + + + IN E + ER FL Sbjct: 175 GITPEN--SINLHWMIPAPAQGAIMITALESDEETRAICAEINDEVSEICTTIEREFLNR 232 Query: 240 LDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+G C + I Y K + F G++L+ DG E ++ + + AA YI Sbjct: 233 LEGGCTAPIGAICYINKEEEVNFKGVLLSKDGTKKIEYTKVVALDQKDELAKLAADYIIE 292 Query: 299 ISNKNVFN 306 K + + Sbjct: 293 KGGKTLID 300 >gi|282165595|ref|YP_003357980.1| probable porphobilinogen deaminase [Methanocella paludicola SANAE] gi|282157909|dbj|BAI62997.1| probable porphobilinogen deaminase [Methanocella paludicola SANAE] Length = 303 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 101/301 (33%), Positives = 148/301 (49%), Gaps = 6/301 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA+A A + L + + T GD T+ L + G G F Sbjct: 1 MRVGTRGSRLAMAQARKVCGLLSER----GVEASPAIIKTSGDVHTSEPLHAMKGVGAFV 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 EI+ +L++GE+D AVHS KD+PTK +GL +A L RE DV ++ + L +L + Sbjct: 57 REIDDRLLAGEVDIAVHSLKDVPTKRPEGLATAAVLKRESALDVAVTREGKKLSELEEGA 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSS RR AL+ + + + RG ++TRL KL + AILLA AG+ RL + + Sbjct: 117 VVGTSSTRRAALIKKHYPHLRTNNIRGNVDTRLRKLGEGEYDAILLAEAGLIRLGMDIIK 176 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ DF PS QG I I P+ + V +N DTW ERA + LDG C Sbjct: 177 -ERLDPYDFVPSANQGVIAIVARPGTPE-FDAVSALNDHDTWLETGVERAIASALDGGCV 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + + +A +G L VL+ DG+ V D A+ + +++ Sbjct: 235 APMGAYARLEGDGLDVVCEVLSLDGRRQARVRETIPVKDHERHALRLAEKLAACGGRDLV 294 Query: 306 N 306 Sbjct: 295 E 295 >gi|83308731|emb|CAJ01641.1| porphobilinogen deaminase (ec 4.3.1.8) [Methylocapsa acidiphila] Length = 293 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 122/292 (41%), Positives = 169/292 (57%) Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74 +ALA A E R L +I I I+ + T GD I +R L+E GGKGLFT+E++ L+ Sbjct: 1 MALAQAHELRGRLAASSRIDGDAIEIVVIKTSGDVIQDRALSEAGGKGLFTKELDFALMR 60 Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRR 134 GE+D AVHSAKD+PT L + I+ YLPRED+RD +IS A +L +V+GT+SLRR Sbjct: 61 GEVDIAVHSAKDLPTSLPGEIAIAGYLPREDVRDAWISPKAAHPLELPAGAVVGTASLRR 120 Query: 135 KALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDF 194 A++ R R D+S++ RG +ETRL KL + A LLA AG+KRL E +L+ +F Sbjct: 121 GAMVKRLRPDLSIVLLRGNVETRLGKLAAGEVDATLLALAGLKRLGLEDRATAVLDAGEF 180 Query: 195 PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254 P+ GQGAI I + A + + + T ++ ERAFL LDGSCK+ I A Sbjct: 181 VPAAGQGAIAITLRAGDQAALDALAPVLDAATGAALAAERAFLHVLDGSCKTPIGAHARL 240 Query: 255 KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 G + F+G+VL DG F EV +G+ +A +G A +R F Sbjct: 241 AGDEINFHGVVLKPDGSQFFEVVLSGSAREAAALGAAAGDDVRARLPAAFFE 292 >gi|15668749|ref|NP_247548.1| porphobilinogen deaminase [Methanocaldococcus jannaschii DSM 2661] gi|2495178|sp|Q57989|HEM3_METJA RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|1591276|gb|AAB98563.1| porphobilinogen deaminase (hemC) [Methanocaldococcus jannaschii DSM 2661] Length = 292 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 89/298 (29%), Positives = 141/298 (47%), Gaps = 12/298 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + L ++ + + I + T GDR+ ++ L++IG G+FT Sbjct: 2 IRIGTRGSKLALYQANKVAELLKNL----GYKVEIKIIKTTGDRVLDKKLSDIGI-GVFT 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ +++ EID AVHS KD+PT + L + A L R+ D+ I + + + Sbjct: 57 KELDLAMLNNEIDIAVHSLKDIPTIWNENLMVGAVLERDSYHDLLIWNKDIDFNEDS-KI 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS+RR+A L + RG ++TRL KL AI+L+ AGI RL Sbjct: 116 VIGTSSMRRRAFLKFIYPNAKFELLRGNVDTRLRKLKEGLYDAIVLSEAGIIRLGVSLED 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ P+P QG I + ++ + + ++K INHE T+ CER L E G C Sbjct: 176 FNYKRLDIL-PAPAQGIIAVACKRDDEEMKSILKEINHERTYLESLCERTALNEFGGGCS 234 Query: 246 SAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIRF 298 A L V+ +D + A+ +G+ ++ Sbjct: 235 VPFGALAVYDEKNELLKLKAAVVTNDELKNASGEVKCKIDEIDKAVELGKKIGLKLKN 292 >gi|158287571|ref|XP_564464.3| AGAP011080-PA [Anopheles gambiae str. PEST] gi|157019715|gb|EAL41625.3| AGAP011080-PA [Anopheles gambiae str. PEST] Length = 599 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 103/308 (33%), Positives = 152/308 (49%), Gaps = 17/308 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K R+G+R S LAL S L ++ P I ++T GDR+ N++L +IG K Sbjct: 11 TKTIRVGSRKSELALTQTKHVISLLQKLN--PDVVYEIHTMTTVGDRVLNKSLPKIGEKS 68 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK--- 119 LFT+++E L +G +D VHS KD+PT L G+ I A L RED RD + + Sbjct: 69 LFTKDLEDALRTGGVDFVVHSLKDLPTSLPLGMAIGAVLEREDPRDALVLNERHRGCTLA 128 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGIK 177 L S++GTSSLRR A L R+ S ++V D RG + TRL KL+ K I+LA AG+ Sbjct: 129 TLPRGSIVGTSSLRRSAQLARYYSHLAVCDIRGNLNTRLAKLDAEASKFAGIILAQAGLV 188 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ K I +I+ + + GQGA+ +E N+ ++ + H +T + ER+FL Sbjct: 189 RMGWNKRIDQIIEPHEILYAVGQGALAVECRSNDEYILGMLGKLCHLETQCRILTERSFL 248 Query: 238 AELDGSCKSAIAGFAYC----------KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 L G C + +A GS L G V + DGK + A + Sbjct: 249 KTLGGGCSAPVAVRTDLKRRWRADDAEDGSPLVVEGAVWSLDGKTEIRTKGDCALDLADS 308 Query: 288 IGRDAAQY 295 G + + Sbjct: 309 RGTNGGRK 316 >gi|309389759|gb|ADO77639.1| porphobilinogen deaminase [Halanaerobium praevalens DSM 2228] Length = 310 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 102/307 (33%), Positives = 159/307 (51%), Gaps = 6/307 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK + IGTR S LAL ++ L K P I +ST GDR ++ +EI + Sbjct: 1 MKKEYIIGTRNSSLALKQCEILKAKLSS--KFPELEFKIKEISTTGDRERDKKFSEINVE 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F EIE L++ EID AVHS KD+PTKL L+++A + R + DV + L +L Sbjct: 59 GIFIREIEYALLAEEIDLAVHSFKDLPTKLPAELEVAAVVDRANRYDVLAGAENK-LAEL 117 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 A + +GT SLRRK+ LL +R D+ ++ RG IETRL K+ + ++LA AG++RL Sbjct: 118 AKGARLGTGSLRRKSQLLAYRPDLEIVPIRGNIETRLKKIKTHNLDGVILAAAGLERLGY 177 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 ++ I E L E P+ QGA+ +E + K +E++K I E V E +FLAE++ Sbjct: 178 KEQITEYLAPEICLPAARQGAVAVEIRKEDSKLKEILKTIETEKNNLEVWTEHSFLAEME 237 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDAAQYIRF 298 C + +A A + TL V DG + ++ + ++ + A ++ Sbjct: 238 AGCHAPVAAEAIIENKTLTLTAAVGEIDGSRIIKKVAKTKKLDLDSVRSLAQKLAVKVKQ 297 Query: 299 ISNKNVF 305 + Sbjct: 298 AGAAEII 304 >gi|256371068|ref|YP_003108892.1| porphobilinogen deaminase [Acidimicrobium ferrooxidans DSM 10331] gi|256007652|gb|ACU53219.1| porphobilinogen deaminase [Acidimicrobium ferrooxidans DSM 10331] Length = 291 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 97/300 (32%), Positives = 147/300 (49%), Gaps = 16/300 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RI TR S LA A L ++ + T GDR +L EIGG+G+F Sbjct: 3 PVRIATRRSALARWQASLVGERL--------GRYELVEVHTAGDRDQASSLAEIGGQGVF 54 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E++ ++ GE D AVHSAKD+PT L ++A L R D RD + L++LA+ Sbjct: 55 VKEVQAAVVRGEADIAVHSAKDLPTA-AGPLLLAAVLERADARDAIVG---ARLEELAIG 110 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTS+ RR A L R D+ V+ RG I TRL ++ + AI++A A ++RL E+ Sbjct: 111 ARVGTSAPRRAAQLRLLRPDLEVVSIRGNIATRLGRV--GELDAIVMAVAALERLGLEEP 168 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 L E P GQGAI +E + E ++ ++ + + + ERA LA C Sbjct: 169 PWWPLPEEVLCPQAGQGAIAVECAPDADGLIERLRSLDDDRSRREIEAERAVLAAFGTGC 228 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + A+ GS+L + + DG EV R G D +G A+ +R + + Sbjct: 229 ALPLGARAHADGSSLRLRAVAVDPDGTRQLEVEREG--VDPATLGATVAEVLRRLGADAL 286 >gi|269796870|ref|YP_003316325.1| hydroxymethylbilane synthase [Sanguibacter keddieii DSM 10542] gi|269099055|gb|ACZ23491.1| hydroxymethylbilane synthase [Sanguibacter keddieii DSM 10542] Length = 312 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 99/317 (31%), Positives = 150/317 (47%), Gaps = 17/317 (5%) Query: 1 MEKKP-FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M P RIGTR S LAL L + P + I+P++T GD + +L+++G Sbjct: 1 MTGHPALRIGTRSSLLALTQTGTVADDLRRLTGRP---VEIVPVTTDGD-VLTGSLSQMG 56 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G G+F + L+ D AVHS KD+PT + GLQ R+D RD S L Sbjct: 57 GTGVFVTALRAALLDDRCDVAVHSLKDLPTAGVLGLQHVT-PVRQDPRDALCSRAGHRLA 115 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIK 177 DL + +GT S RR A L R D+ V+D RG I+TRL ++ A++LA AG+ Sbjct: 116 DLPHGARVGTGSPRRAAQLRLVRPDLDVVDIRGNIDTRLGRVHPETGDLDAVVLAAAGLN 175 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH----EDTWDSVNCE 233 R+ +E I E++++ D P+PGQGA+ +ET + + +V T SV E Sbjct: 176 RIGREHAITELISVTDMAPAPGQGALAVETRSSLLEEDPVVARAFDQLDDPATSLSVLAE 235 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-----AINI 288 RA LA L+ C + + A L + +V DG +++ D A+ + Sbjct: 236 RALLARLEAGCAAPVGTHATVSDGLLTLHAVVARPDGSEQLRHNQSTEVADTSTAEAVAL 295 Query: 289 GRDAAQYIRFISNKNVF 305 G A + + + Sbjct: 296 GEAVADHFLALGAASFI 312 >gi|293402361|ref|ZP_06646498.1| hydroxymethylbilane synthase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304208|gb|EFE45460.1| hydroxymethylbilane synthase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 299 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 101/292 (34%), Positives = 154/292 (52%), Gaps = 2/292 (0%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 IGTR S LALA + + R+ L + + P H+ + ++TKGD + L ++ KG+F + Sbjct: 4 IIGTRGSALALAQSEQVRTLLQNTY--PQHSFTLQIIATKGDLQQHVALDQMDAKGIFVK 61 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EIE+ L++G+I AVHS KDMPT+L KGL + L RED RDVFIS T + +L + Sbjct: 62 EIEEALLAGKIHMAVHSLKDMPTQLPKGLCFTKTLLREDARDVFISRTKTAFHELGPQAK 121 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGT S RRK L++ R DISV+ RG ++TRL K+ + I+LA AG+KRL+ + + Sbjct: 122 IGTGSKRRKVQLMKLRPDISVVGIRGNVDTRLRKMEEQQLDGIVLAAAGLKRLQVQGISY 181 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E P+ GQGA+ IE + ++ + + + ER FL +DG C + Sbjct: 182 EYFPYTSMIPACGQGALAIEVKEQDATLLTMINALANTHIDQEIQIERTFLQAIDGGCHT 241 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 + + F + D + DA + +AA+Y+ Sbjct: 242 PVGAHCKITEKEIVFDALYGNEDCSKMCNLHWRRPLTDAQQLPFEAAKYLIK 293 >gi|58585034|ref|YP_198607.1| porphobilinogen deaminase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419350|gb|AAW71365.1| Porphobilinogen deaminase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 292 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 116/295 (39%), Positives = 168/295 (56%), Gaps = 8/295 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+A A E + L+D+ ++ II + T GD+ N L EIGGKGLF Sbjct: 3 IRIGTRGSSLAIAQALEAKQKLLDL--FSSLSVEIIKIKTSGDKYANANLAEIGGKGLFI 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE +LI ID AVHS KD+P K L I L R D FIS+ +SLK L + Sbjct: 61 KEIETELIKSNIDMAVHSLKDVPAFFSKDLTIPCILERLSPYDTFISNKYKSLKSLPQQA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +I TSS+RRK LL +R D++++ RG + TR L N I+LA AG+ RLKK+ +I Sbjct: 121 IIATSSIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLKKDYLI 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L+ + + GQGAICI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC Sbjct: 178 TEVLSPKTMLSAVGQGAICIQCRKNDIKIIDLLEKINNNKSFIRVKSERSFMKTVNGSCF 237 Query: 246 SAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + +A A Y + L+ Y ++ D K + R DA +G DA ++ Sbjct: 238 TPLAALAKYVSENVLHLYCMLA--DKKNIYFTERTSFVEDAEKMGMDAGLELKSK 290 >gi|225872374|ref|YP_002753829.1| hydroxymethylbilane synthase [Acidobacterium capsulatum ATCC 51196] gi|225793745|gb|ACO33835.1| hydroxymethylbilane synthase [Acidobacterium capsulatum ATCC 51196] Length = 312 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 104/324 (32%), Positives = 151/324 (46%), Gaps = 39/324 (12%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLT----EIGGK 61 RIG+R S LAL A + L + H + I + T GD + + T E+GGK Sbjct: 2 MRIGSRGSQLALWQANHIAARLRTL----GHEVTIEIIRTTGDALQHVTFAKVSTELGGK 57 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT+EIE+ L G ID AVHS KD+PT L ++A R D RD +S SL L Sbjct: 58 GIFTKEIEEALREGRIDLAVHSLKDLPTDLDPAFTLAAIPERVDPRDALLSARYTSLASL 117 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GTSS RR+A LL RSD+ +FRG ++TR+ K+ +A AI+LA AG++RL Sbjct: 118 PHGACVGTSSERRRAQLLVHRSDLRFQEFRGNVDTRIRKMVEGQADAIILASAGLERLGL 177 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + +E L E P+ GQGA+ IET ++ + ++ ++H T +V ER LA L Sbjct: 178 TEYRRECLAPEILCPAAGQGALAIETRADDAETLAILASLDHSATRYAVTAERTALASLG 237 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC------------------ 283 G C+ I V +DG + G Sbjct: 238 GGCQVPIGIHC----------APVPGADGAYAIQGVVAGAAAKAASSAAHPVIRVAFEHQ 287 Query: 284 ---DAINIGRDAAQYIRFISNKNV 304 +GR A+ + + Sbjct: 288 QGLSPQALGRQLAEELLRQGAQPF 311 >gi|167754990|ref|ZP_02427117.1| hypothetical protein CLORAM_00494 [Clostridium ramosum DSM 1402] gi|237735283|ref|ZP_04565764.1| porphobilinogen deaminase [Mollicutes bacterium D7] gi|167705040|gb|EDS19619.1| hypothetical protein CLORAM_00494 [Clostridium ramosum DSM 1402] gi|229381028|gb|EEO31119.1| porphobilinogen deaminase [Coprobacillus sp. D7] Length = 297 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 97/292 (33%), Positives = 149/292 (51%), Gaps = 3/292 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +G+R S LAL L + P + I + T GD++ + L +I KG+F Sbjct: 2 KIIVGSRGSSLALKQTEYVIEKLQRAY--PENEYEIKVIHTIGDKMQHIALDKINDKGVF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIEK+L+ ID AVHS KDMP+ GL + L D RD + SL L H Sbjct: 60 VKEIEKELLEHTIDLAVHSLKDMPSDNPAGLVYAKTLAPSDYRDCLVLKNCSSLARLPQH 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + I T S RRK LL+ R D+ ++D RG + TRL K+ N + ++LA AG+KRL E + Sbjct: 120 ATIATGSKRRKYQLLKLRPDLKIVDIRGNVNTRLQKMANQEIDGLVLASAGLKRLGLEDL 179 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I E L+ P+ GQG + I+ + + ++ I+ E T + ER FL ++GSC Sbjct: 180 ISEYLDETKMIPACGQGILAIQVR-QDSELLTMINNISDEITTTRMELERLFLKTVNGSC 238 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + G+A G ++FYG++ DG + + + + DA A+ + Sbjct: 239 HIPVGGYAKIIGDQVHFYGLLGNEDGTVLKNIDKKFSLKDASEEVTALAEML 290 >gi|290958356|ref|YP_003489538.1| hydroxymethylbilane synthase [Streptomyces scabiei 87.22] gi|260647882|emb|CBG70987.1| putative hydroxymethylbilane synthase [Streptomyces scabiei 87.22] Length = 322 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 85/320 (26%), Positives = 154/320 (48%), Gaps = 20/320 (6%) Query: 1 ME---KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57 M + R+GTR S LA++ + + ++ + P + ++ ++T GD + L + Sbjct: 1 MSEPHNRALRLGTRRSTLAMSQSRQVADAVRRLTGRP---VELVEITTYGDVSREQ-LAQ 56 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 IGG G+F + + L+ GE+D AVHS KD+PT L ++A R D RDV ++ + Sbjct: 57 IGGTGVFVAALREALLRGEVDFAVHSLKDLPTTYPDELTLAAVPVRADARDVLVARDGLT 116 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAY 173 + L + +GT S RR A L + + RG ++TR+ + + A++LA Sbjct: 117 FEQLPAGARVGTGSSRRMAQLNAYARGHGLTIETVPIRGNVDTRIGYVRKGELDAVVLAA 176 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG+ R+ + + + L+++ P+PGQGA+ IE + + + ++ DT +V E Sbjct: 177 AGLSRIGRIDEVTDFLSVDTVLPAPGQGALAIECAAADAELIAALAGLDDPDTRAAVTAE 236 Query: 234 RAFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CD 284 R+ LA L+ C + + FA + G+V +DG ++S G Sbjct: 237 RSLLAALEAGCSAPVGAFADLLADGQTVKEMRLRGVVGTTDGSTLVQLSTTGPVPETYDQ 296 Query: 285 AINIGRDAAQYIRFISNKNV 304 A+ +GR+ A + + Sbjct: 297 AMALGRELAAEMLAKGAAGL 316 >gi|20094183|ref|NP_614030.1| porphobilinogen deaminase [Methanopyrus kandleri AV19] gi|19887202|gb|AAM01960.1| Porphobilinogen deaminase [Methanopyrus kandleri AV19] Length = 305 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 84/297 (28%), Positives = 148/297 (49%), Gaps = 3/297 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+ TR S LA+ E L + I+ ++GD + +R L ++G KG+F Sbjct: 11 TIRVATRSSRLAIIQTREVIELLERESPR-DVEVEIVKTKSRGDVVRDRPLHKLGEKGVF 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+++ ++ G+ D AVHSAKD+P+ + + ++A PR D R+ +S LK+L Sbjct: 70 VKEVDRLVLEGKADIAVHSAKDVPSVVDYPVDVAAVPPRRDPRECLVSR-HGGLKELPRG 128 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSS RR+A +L R D+ V RG ++TR++K+ + A +LA G+ RL Sbjct: 129 ATVGTSSPRRRAQILLERPDLKVEPMRGNVDTRVSKVRRREYDAAVLAKVGLDRLGMTSE 188 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E+ + E+F P GQGA+ I ++ + + L++V++ E + V E+A + EL C Sbjct: 189 VSEVYDPEEFVPPAGQGALMITCRKDDDRVKRLLEVVDDEKSRVEVETEKAVVRELGVGC 248 Query: 245 KSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 + G + + DG H + G+ D + A+ + Sbjct: 249 SEPVGVHVRARDGDHVRLVLGLFEEDGSCGHVLKMRGSPEDVVREAVSQAREVLSDG 305 >gi|194748513|ref|XP_001956689.1| GF24457 [Drosophila ananassae] gi|190623971|gb|EDV39495.1| GF24457 [Drosophila ananassae] Length = 648 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 100/300 (33%), Positives = 145/300 (48%), Gaps = 18/300 (6%) Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M +K R+G+R S LAL L ++ P I +ST GDR+ N +L +I Sbjct: 1 MSAQEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKI 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + Sbjct: 59 GEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKG 118 Query: 119 KDL---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAY 173 + SVIGTSSLRR A + R + V D RG + TRL KL+ ++K I+LA Sbjct: 119 HTIASLPNGSVIGTSSLRRTAQIRRQYPHLVVCDIRGNLNTRLAKLDAADSKFAGIILAQ 178 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG+ R+ I ++L D + GQGA+ +E N+ +++ + +T + E Sbjct: 179 AGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDEPVLAMLQKLMCLNTTCRILAE 238 Query: 234 RAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCD 284 R+FL L G C + +A ++ KG L G V + DG I + Sbjct: 239 RSFLKTLGGGCSAPVAVWSNLKGEPLNGNTQEVGLSLTGAVWSLDGAIEIRNHLACALNE 298 >gi|221134062|ref|ZP_03560367.1| porphobilinogen deaminase [Glaciecola sp. HTCC2999] Length = 328 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 101/324 (31%), Positives = 158/324 (48%), Gaps = 37/324 (11%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + A ++ L + P ++ ++P+STKGDRI + L ++GGKGLF +E+E + G Sbjct: 1 MWQAEYVQAQLKAHY--PDMSVNLVPMSTKGDRILDTPLAKVGGKGLFIKELEVAMQEGR 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 D AVHS KD+P + +G + A PRE+ D F+S+T + L +V+GTSSLRR+A Sbjct: 59 ADIAVHSMKDVPVEFPEGFGLHAICPRENPFDAFVSNTYDDIDSLPKGAVVGTSSLRRQA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 L R D+++ D RG + TRL KL+ + AI+LA AG+ RLK I+ ++ P Sbjct: 119 QLRARRPDLTIKDLRGNVNTRLAKLDAGEYDAIILACAGLIRLKMHDRIRSEIDPLTSLP 178 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + GQGA+ IE +N ++++ + +T V ERA A+L G C+ I FA + Sbjct: 179 AVGQGAVGIECRDDNLALIDVLQCLACPETTIRVMAERAMNAKLQGGCQVPIGSFATLET 238 Query: 257 S-----TLYFYGIVLASDGKIFHEVS------------------------------RNGN 281 S LY G+V DG + E + Sbjct: 239 SQDGYRELYLKGLVATVDGSVLLESDGSVILAKTAEEMMNDITDTSVTLNSPLEQIEEVH 298 Query: 282 RCDAINIGRDAAQYIRFISNKNVF 305 AI +G+ A + ++ Sbjct: 299 IQQAIQLGQHIASQLIEQGAADIL 322 >gi|325690356|gb|EGD32360.1| hydroxymethylbilane synthase [Streptococcus sanguinis SK115] Length = 306 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 110/303 (36%), Positives = 162/303 (53%), Gaps = 9/303 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K ++GTR S LA+ + L ++H P + V++P +TKGDR+T+ +L EIGGKG Sbjct: 1 MKVIKVGTRKSKLAMTQTQQLVEQLKELH--PERDFVLVPYTTKGDRLTHVSLQEIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT-AQSLKDL 121 +F +EIE+ L++GEID AVHS KDMP KL +G + A RED+RD I Q+L DL Sbjct: 59 VFVKEIERALLAGEIDMAVHSLKDMPAKLAEGCALGAISQREDVRDCLIFRQAGQTLADL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++IGTSS+RR+ L R D++ RG I+TR+ KL + AI+LA AG+KRL Sbjct: 119 PEGALIGTSSIRRQVQLQAQRPDLAFKPLRGNIDTRIKKLEEGEYDAIVLAMAGLKRLGW 178 Query: 182 EKV---IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + L P+ QGA+ +E + + ++L+ + E T V ERA LA Sbjct: 179 LDQSLLHIQPLETRLCLPAISQGALAVEYREEDEELRKLLATVQDEKTAAEVAVERAVLA 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +++ C IA A KG ++ DG+ VS G D + A + + Sbjct: 239 QMNADCTFPIAALAQKKGQDYQLEAMLAKEDGQCVF-VSLQG--QDGQELAEQAVRQLAD 295 Query: 299 ISN 301 Sbjct: 296 KGA 298 >gi|124485351|ref|YP_001029967.1| pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [Methanocorpusculum labreanum Z] gi|124362892|gb|ABN06700.1| uroporphyrin-III C-methyltransferase [Methanocorpusculum labreanum Z] Length = 542 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 94/307 (30%), Positives = 144/307 (46%), Gaps = 24/307 (7%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LALA + L + + + + T GD++T+R L +IGG Sbjct: 1 MSK--IRIGTRGSKLALAQTKKVIGLLAEN----GIDAEYVIIKTTGDKVTDRGLHQIGG 54 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F E++ ++ GEIDCAVHS KD+P + KGL A L R+ D + + Sbjct: 55 FGMFVRELDNAILRGEIDCAVHSMKDIPAERPKGLLTVAVLKRDPPYDFLVMNG-----K 109 Query: 121 LALHSVIGTSSLRRKALLLRWRSDIS---VIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 + VIGTSSLRRKA LLR+ + V RG ++TRL KL++ I++A AG+ Sbjct: 110 VEDLMVIGTSSLRRKAQLLRYFHNCPAVRVEMLRGNLDTRLGKLDDGLYDGIMVAEAGLM 169 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL K L+ + F P+ QG I I + P+ + +N + ER + Sbjct: 170 RLDY-KRNGVRLSPDMFVPAANQGTIAI-VSRDTPELRAAFAPLNDPQSALDCAIERIVM 227 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-GNRCDAINIGRDA---A 293 ++ G C + + F + + VL+ DG ++ G+ A G Sbjct: 228 EQVGGGCFTPMGIFCENQ----HLTAEVLSLDGTRAERITAEIGDLEGARVAGIRLKNVG 283 Query: 294 QYIRFIS 300 + + Sbjct: 284 AELIAEA 290 >gi|54310580|ref|YP_131600.1| putative porphobilinogen deaminase [Photobacterium profundum SS9] gi|46915023|emb|CAG21798.1| putative porphobilinogen deaminase [Photobacterium profundum SS9] Length = 234 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 84/201 (41%), Positives = 121/201 (60%), Gaps = 2/201 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M KP RI TR SPLA+ A ++ L H P + ++P+ TKGD I + L ++GG Sbjct: 32 MTDKPIRIATRKSPLAMWQAEFVQAELEKAH--PSLVVELVPMVTKGDIILDTPLAKVGG 89 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E ++ G D AVHS KD+P + +GL + RED RD F+S+T S+ + Sbjct: 90 KGLFVKELEVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNTYNSIAE 149 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+ RL+ Sbjct: 150 LPAGSIVGTSSLRRQCQLRAQRPDLIINDLRGNVNTRLRKLDEGQYDAIILACAGLMRLE 209 Query: 181 KEKVIKEILNIEDFPPSPGQG 201 I+ + E+ P+ GQG Sbjct: 210 MHDRIRSAIEPEESLPAVGQG 230 >gi|227549755|ref|ZP_03979804.1| porphobilinogen deaminase [Corynebacterium lipophiloflavum DSM 44291] gi|227078141|gb|EEI16104.1| porphobilinogen deaminase [Corynebacterium lipophiloflavum DSM 44291] Length = 301 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 88/305 (28%), Positives = 141/305 (46%), Gaps = 13/305 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IGTR S LA A R ++ H+ + ++T GD ++ E G G+FT Sbjct: 2 LHIGTRGSHLATTQAGHVRDDIIAA----GHDAELTIVTTPGD--LSQAPVERIGVGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + L GE++ AVHS KD+PT I RED R+ I+ L DL + Sbjct: 56 SALRDALFRGEVEIAVHSFKDLPTADEPRAHI-VVPAREDNREALIARDGMQLADLPQGA 114 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTS+ RR + L R D+ + RG IE+R+ ++ + + AI+LAYAG+ R Sbjct: 115 RVGTSAPRRISQLKALRPDLDIRPLRGNIESRMGRVTSGELDAIVLAYAGLLRAGYGDRA 174 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ + +F P+P QGA+ +E ++ + + ++ + T V+ ER LA L+ C Sbjct: 175 TQLFDASEFLPAPAQGALAVECRSDDAETRAVLDPLMDAATALQVSAERHVLATLEAGCT 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD------AINIGRDAAQYIRFI 299 + +A A+ G L V A DG S + D A +GR+ A + Sbjct: 235 APVAAHAFYDGGELSLRAGVFALDGSHQLVESGSVTVADTLDREAARGLGRELASRLLDA 294 Query: 300 SNKNV 304 + Sbjct: 295 GAAEL 299 >gi|330507063|ref|YP_004383491.1| porphobilinogen deaminase [Methanosaeta concilii GP-6] gi|328927871|gb|AEB67673.1| porphobilinogen deaminase [Methanosaeta concilii GP-6] Length = 305 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 88/301 (29%), Positives = 149/301 (49%), Gaps = 9/301 (2%) Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 GTR SPLAL + L + + + T GD ++ L ++ G G+F EI Sbjct: 2 GTRGSPLALRQTQIVQERLKGL----GIQTQLCRVKTSGDVFLDKPLHQLTGFGVFVAEI 57 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSLKDLALHSV 126 +++++SG+ID AVHS KD+PTK + L +SA L R+ DV + +S+++L + Sbjct: 58 DERMLSGKIDLAVHSMKDLPTKRPEELIVSAVLKRDSPYDVLLCREKSVKSIEELDQGAR 117 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 +GTSS+RR A LLR R D++++ RG ++TRL+KL AI+LA AG++R+ Sbjct: 118 VGTSSMRRMAQLLRARPDLNILSLRGNLQTRLSKLERGDYDAIVLAEAGLERMGY-HPDY 176 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L+ E F PS QG I + +A+ + ++ ER + + G C Sbjct: 177 VRLDGERFVPSANQGTIIV-VAKAGSEAEACSRALDDAHARSETMIERKIMETVGGGCVV 235 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN-RCDAINIGRDAAQYIRFISNKNVF 305 +A A + VL+ DGK F + + + + + D + + + + + Sbjct: 236 PMAVHALVQKGEARVLAEVLSPDGKRFVRLEERISLVQNHLAVAEDMGERLMRMGGRELV 295 Query: 306 N 306 + Sbjct: 296 D 296 >gi|312622563|ref|YP_004024176.1| porphobilinogen deaminase [Caldicellulosiruptor kronotskyensis 2002] gi|312203030|gb|ADQ46357.1| porphobilinogen deaminase [Caldicellulosiruptor kronotskyensis 2002] Length = 290 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 98/296 (33%), Positives = 146/296 (49%), Gaps = 6/296 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RIG R S L+ + +P+ TKGD ++L + G Sbjct: 1 MKKLRIGARDSKLSRIQVDIVARKIKQTL---GIECEFVPIKTKGDIDKTKSLKDFKSPG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F +EIE L S EID AVHS KD+P ++ I A + RED RDV +S L Sbjct: 58 VFVKEIELALFSREIDLAVHSLKDLPCEMDSNFDIVAVVEREDSRDVLVSKDGVGFYQLK 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ IGTSSLRR+ L R DI V++ RG IETRL+K+ + ++LAYA +KRL + Sbjct: 118 PNAKIGTSSLRREVHLKNLREDIQVVNIRGNIETRLSKIESEGLDGVVLAYAALKRLNLD 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I ++ + P PGQGAICIE ++P ++ IN D + ER L L G Sbjct: 178 SRVSYIFDVNEITPCPGQGAICIECLKDSPYK-NILNKINDTDAYIQTQFERLVLKFLGG 236 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C S+I F +Y + +L G + S G++ D +++ + ++ Sbjct: 237 GCHSSIGVFCKTDQDKIYAFASLLR--GDKLVKASIEGDKADFLSLANKLSNMLKS 290 >gi|300779915|ref|ZP_07089771.1| hydroxymethylbilane synthase [Corynebacterium genitalium ATCC 33030] gi|300534025|gb|EFK55084.1| hydroxymethylbilane synthase [Corynebacterium genitalium ATCC 33030] Length = 295 Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 91/305 (29%), Positives = 139/305 (45%), Gaps = 10/305 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + R+ TR S LA A R +L+ H+ + ++T GD + IG Sbjct: 1 MTE-TLRVATRGSKLATTQAGHIRDALISA----GHSAELTIVTTAGDMSQ-APVERIG- 53 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT I + L GE D AVHS KD+PT + RED R+ I+ L D Sbjct: 54 VGVFTTAIRQALFDGEADVAVHSFKDLPTAHEPRTHLI-IPVREDRREALIARDGLKLAD 112 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTS+ RR A L R D+ + RG IE+R+ ++ + + A++LAYAG+ R+ Sbjct: 113 LPSGARVGTSAPRRIAQLRAKRPDLDIHPLRGNIESRMGRVTSGELDAVVLAYAGMSRVG 172 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + E+ EDF P+P QGA+ +E + +A + + + ER LA L Sbjct: 173 LGERATEVFAPEDFMPAPAQGALAVECRAEDAQAVAAIDTLVDDFATRCALTERFVLATL 232 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 + C + +A A G + G V A DG +G D +G+ AQ + Sbjct: 233 EAGCTAPVAASAVLDGDEITVRGGVFALDGSAQLVREASGT--DPREVGQACAQQLFDAG 290 Query: 301 NKNVF 305 Sbjct: 291 AAQFL 295 >gi|162147854|ref|YP_001602315.1| porphobilinogen deaminase [Gluconacetobacter diazotrophicus PAl 5] gi|209542474|ref|YP_002274703.1| porphobilinogen deaminase [Gluconacetobacter diazotrophicus PAl 5] gi|161786431|emb|CAP56013.1| Porphobilinogen deaminase [Gluconacetobacter diazotrophicus PAl 5] gi|209530151|gb|ACI50088.1| porphobilinogen deaminase [Gluconacetobacter diazotrophicus PAl 5] Length = 367 Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 110/320 (34%), Positives = 159/320 (49%), Gaps = 19/320 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGGKG 62 P R+GTR SPLAL + L + ++T GD++ NR L EIGGKG Sbjct: 46 PLRVGTRASPLALVQTRAFLTMLTRFCPVLRDMGAFQEHQINTTGDQVQNRRLAEIGGKG 105 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL- 121 LF +EI L G ID AVHS KD+ T L GL ++ L RED RD I + Sbjct: 106 LFAKEIHDALSDGRIDFAVHSLKDLETTLPPGLVLACTLRREDARDALILGPGAGGRHDA 165 Query: 122 ----------ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILL 171 ++++G +S+RR+A +L R D+ RG ++TRL+KL + A LL Sbjct: 166 ADAADPYAALPRNALVGCASVRRQAQMLHVRPDLRFGLLRGNVQTRLDKLAARQCDATLL 225 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG++RL E +L+ E P+ GQG + + ++ + +EL+ I + Sbjct: 226 ALAGLRRLGMEDRADIVLDPEIMVPAAGQGIVGVTVRESDVELRELLAAIEDYEARAVAT 285 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGS------TLYFYGIVLASDGKIFHEVSRNGNRCDA 285 ERA LAELDGSC++ I G+A +L G+V DG + G R DA Sbjct: 286 AERALLAELDGSCRTPIGGYARLVPGLAGAEASLRLTGLVAREDGSFLLRRTVTGLRADA 345 Query: 286 INIGRDAAQYIRFISNKNVF 305 +GR+ + +R S +VF Sbjct: 346 EEMGRELGRSLRMDSPSDVF 365 >gi|290955334|ref|YP_003486516.1| porphobilinogen deaminase [Streptomyces scabiei 87.22] gi|260644860|emb|CBG67946.1| porphobilinogen deaminase [Streptomyces scabiei 87.22] Length = 296 Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 96/295 (32%), Positives = 144/295 (48%), Gaps = 6/295 (2%) Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74 +ALA R+ L +H P ++P+ T GD+ L+++ GKG FT+E++ L++ Sbjct: 1 MALAQVERVRAELAVLH--PALRTEVVPVKTTGDKWMG-DLSQVEGKGAFTKEVDAALVA 57 Query: 75 GEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSL 132 GE D AVH KD+P L G +A+L R+DIRD + ++L +L + IGTSS+ Sbjct: 58 GEADLAVHCVKDIPADRPLPAGTMFAAFLKRDDIRDALVDPAGRTLDELPAGTRIGTSSV 117 Query: 133 RRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192 RR A L + + FRG RL KL +A A+LLA +G++R+ + VI E L++E Sbjct: 118 RRTAQLAASHPHLECVPFRGNANRRLEKLAAGEADALLLAVSGLERIGRADVISEFLSVE 177 Query: 193 DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252 P G G + ++ + + V + DT ER FL L G C S IAGFA Sbjct: 178 TMMPPIGAGVLALQCREGDALTIDTVSGLGDPDTHRETLAERMFLHVLQGHCNSPIAGFA 237 Query: 253 YCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 G L V DGK R D +G A + +++ + Sbjct: 238 RTDRGGELSLRASVFTPDGKTVLNAHEWAGRLDPATLGTSVAVALLRQGARDLID 292 >gi|195440018|ref|XP_002067856.1| GK12668 [Drosophila willistoni] gi|194163941|gb|EDW78842.1| GK12668 [Drosophila willistoni] Length = 629 Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 100/300 (33%), Positives = 145/300 (48%), Gaps = 18/300 (6%) Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M K R+G+R S LAL L ++ P I +ST GDR+ N +L +I Sbjct: 1 MSIQDKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNISLPKI 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + Sbjct: 59 GEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKG 118 Query: 119 KDL---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAY 173 + SVIGTSSLRR A + R + V D RG + TRL KL+ ++K I+LA Sbjct: 119 HSIATLPKGSVIGTSSLRRTAQIRRQYPHLVVCDIRGNLNTRLAKLDAADSKFAGIILAQ 178 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG+ R+ I ++L D + GQGA+ +E N+ ++++ + +T + E Sbjct: 179 AGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDGPVLDMLQKLLCLNTTCRILAE 238 Query: 234 RAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNGNRCD 284 R+FL L G C + +A ++ KG L G V + DG I + Sbjct: 239 RSFLKTLGGGCSAPVAVWSNLKGEPMTANSQDVGLSLTGAVWSLDGAIEIREHLACALSE 298 >gi|148284479|ref|YP_001248569.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Boryong] gi|167008815|sp|A5CDH4|HEM3_ORITB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|146739918|emb|CAM79909.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Boryong] Length = 298 Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 109/297 (36%), Positives = 163/297 (54%), Gaps = 7/297 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+G+R S LAL A + + + N +IIP+ T GD I N+ L +IGGKGLF Sbjct: 3 IRVGSRASRLALIQAQAVVQKI---NDLLGLNAIIIPIKTTGDLIQNKNLYDIGGKGLFL 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ ID AVHS KD+P L GLQ++A L R D+ D+ +S A + DL L + Sbjct: 60 KEIEYALLNNTIDIAVHSLKDVPAYLPDGLQLAAVLERGDVGDMLVSKIANKITDLPLGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-V 184 ++GTSS+RR+ LL R D++++ FRG ++TR NK+ NN+ A +LA AG++RL + Sbjct: 120 IVGTSSVRRRIQLLMLRPDLNIVLFRGNVDTRWNKIINNEVDATVLAAAGLQRLNYDTSR 179 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ + P+ GQGAI IE ++ L INH+ TW + ER +L L+ C Sbjct: 180 FCNIIPQSEMLPAIGQGAIAIEARKDDKLIMPLCAKINHQLTWQLIQVERGYLKTLNADC 239 Query: 245 KSAIAGFAYCKGSTLYFYG--IVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 I G A G+ F ++ + + F G +IG +AA+ + Sbjct: 240 NVPIGGIASYIGNN-SFEAKFMLGDYNMRYFFYSEVRGKLQHGYDIGVEAAKNFQKR 295 >gi|296115106|ref|ZP_06833747.1| porphobilinogen deaminase [Gluconacetobacter hansenii ATCC 23769] gi|295978207|gb|EFG84944.1| porphobilinogen deaminase [Gluconacetobacter hansenii ATCC 23769] Length = 358 Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 112/316 (35%), Positives = 161/316 (50%), Gaps = 15/316 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPH--NIVIIPLSTKGDRITNRTLTEIGGKG 62 P ++GTR SPLAL + L + +ST GD++ NR L EIGGKG Sbjct: 41 PLKVGTRASPLALVQTRAFLTVLTRFCPVLRDMGAFQEHQISTTGDQVLNRKLAEIGGKG 100 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL- 121 LF +EI + L+ G ID AVHS KD+ T L GL ++ L RED RDV I D Sbjct: 101 LFAKEIHEALLDGRIDFAVHSLKDLETALPPGLVLACTLRREDARDVLILGPDCPTPDPM 160 Query: 122 ------ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 A +++G +S+RR+A +L R D+ RG ++TRL+KL + A LLA AG Sbjct: 161 DPYSALAPGALVGCASVRRQAQMLHVRPDLRFGLLRGNVQTRLDKLAARQCEATLLALAG 220 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 ++RL E IL+ P+ GQG + + ++ + +EL+ I + ERA Sbjct: 221 LRRLGMEDRADVILDPTVMVPAAGQGIVGVTVRESDVELRELLAAIEDYEARAVATAERA 280 Query: 236 FLAELDGSCKSAIAGFAY----CKGS--TLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 LAELDGSC++ I G+A G L+ G+V DG + S +G DA +G Sbjct: 281 LLAELDGSCRTPIGGYARLIPVVAGGAPELHLTGLVAREDGSFLLKRSISGAPSDAARLG 340 Query: 290 RDAAQYIRFISNKNVF 305 + +R S ++F Sbjct: 341 HALGRSLRADSPSDIF 356 >gi|299134347|ref|ZP_07027540.1| porphobilinogen deaminase [Afipia sp. 1NLS2] gi|298591094|gb|EFI51296.1| porphobilinogen deaminase [Afipia sp. 1NLS2] Length = 324 Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 90/318 (28%), Positives = 140/318 (44%), Gaps = 20/318 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-LF 64 RIGTR S +ALA E L P + I+ T GD+ L ++GGKG F Sbjct: 1 MRIGTRKSVMALAQTNEIARQLTAA--DPSLAVEIVKFETMGDQDQTGKLLDLGGKGGAF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSLKD--- 120 +I + G ++ A+HS KDMP + GL I A L R+ D + +L + Sbjct: 59 VAQIRDAVREGRLEAAMHSLKDMPGNEDTPGLVIGAMLLRDPPTDALVVRNGVTLDELRR 118 Query: 121 -LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN------------NNKAH 167 IGT+++RR A + R + +I FRG +TR+ KL+ A Sbjct: 119 SRGKGFKIGTNAVRRAAYVRRLFPEAEIIHFRGAADTRIRKLDGREMQRLPDGGEVGPAD 178 Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227 A+++A AG++R+ I + ++ P+ GQG + +E + + + I++ + Sbjct: 179 ALVMARAGLERVGFADRIVHQFSPDEMLPAVGQGIVAVECAAADWQTLARLAGIDNAVSR 238 Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 ER L L+G C S IAG+A G + VL F EV+R G Sbjct: 239 QCGEAEREVLWVLNGHCNSPIAGYATLDGGEISLKAAVLDEANHHFIEVTRRGPVGRPRE 298 Query: 288 IGRDAAQYIRFISNKNVF 305 +GR A + +V Sbjct: 299 LGRAVAFDLLEKGAADVI 316 >gi|182626954|ref|ZP_02954686.1| porphobilinogen deaminase [Clostridium perfringens D str. JGS1721] gi|177907690|gb|EDT70308.1| porphobilinogen deaminase [Clostridium perfringens D str. JGS1721] Length = 291 Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 98/294 (33%), Positives = 154/294 (52%), Gaps = 6/294 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LA + L + + + + T+GDR + +L +IGGKGLF Sbjct: 3 LIIATRKSKLAQVQTEKVMELLKEKENVDSKK---LLVMTEGDRRLDVSLNKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L + Sbjct: 60 KEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI Sbjct: 120 RIGTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + + F P+ GQGA+ IE + + K ++ ++ +V+ ER+F+ L+G C Sbjct: 180 SDYFDPKVFLPAIGQGALGIECLKGG-EFNDYFKALDSKEVRTTVDAERSFMKVLNGGCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S I ++ K + LY G + + GN+ D I +G+ A+ I Sbjct: 239 SLIGAYSEVKDNDLYMIGT-FTVN-NRIVKKDILGNKEDNILLGKKLAEKILEE 290 >gi|67515679|ref|XP_657725.1| hypothetical protein AN0121.2 [Aspergillus nidulans FGSC A4] gi|40746143|gb|EAA65299.1| hypothetical protein AN0121.2 [Aspergillus nidulans FGSC A4] Length = 350 Score = 199 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 90/322 (27%), Positives = 140/322 (43%), Gaps = 20/322 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K F IGTR S LAL ++L + + P + I T GD+ T L + K Sbjct: 14 SQKIFTIGTRKSKLALLQTDLVLAALKE--RFPDYTFKIHSRETAGDQNTTIALRDFTTK 71 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA---YLPREDIRDVFISHTAQSL 118 L+T+E+E L +G +D VHS K + + RED RD + Sbjct: 72 NLWTQELEDLLEAGSVDLIVHSLKGISYVPTLLPTSCTLGPMMKREDSRDGLVIKKGLPN 131 Query: 119 K---DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAY 173 ++ SV+GTSS+RR A L R + V+D RG I TRL KL+ ++LA Sbjct: 132 MSLAEMPAGSVVGTSSIRRTAQLARKYPHLKVMDVRGNIGTRLAKLDAEDSPYTCLILAA 191 Query: 174 AGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 AG+ RL I + L+ + + GQGA+ IE + ++++ I H++T + Sbjct: 192 AGLLRLGLGDRIYQYLDSRNAGMLYAVGQGALGIEIRKGDKAMEDILNTIGHKETTFACL 251 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNGNRC--- 283 ER+ L L+G C + + T L +V++ DG EV +G Sbjct: 252 AERSLLRTLEGGCSAPLGVETEWIQDTNGSSKLRMRSVVVSVDGSEHAEVEIDGTVDSPQ 311 Query: 284 DAINIGRDAAQYIRFISNKNVF 305 A G A+ + + Sbjct: 312 SAEEFGVTVAKALVNEGAGKIL 333 >gi|315049563|ref|XP_003174156.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893] gi|311342123|gb|EFR01326.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893] Length = 312 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 91/310 (29%), Positives = 136/310 (43%), Gaps = 29/310 (9%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA+ A RS L + P H I L T GD+ N L G K L+ Sbjct: 12 PLRIGTRRSNLAVIQAKTIRSQLEKI--APEHTFEIEALHTLGDKDQNSALYNFGAKDLW 69 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T E+E+ L SG++D VH KDMPT+L ++A R+D RD + SL+ L Sbjct: 70 TTELEELLTSGKLDIVVHCLKDMPTQLPDSCDLAAIPLRDDPRDALVIKAGLPYTSLQTL 129 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +++GTSS+RR A L R + ++ RG +ETRL KL++ K+ I + + Sbjct: 130 PEGAIVGTSSVRRSAQLRRLFPHLRFMNIRGNVETRLAKLDDPKSEYICIVMSACGL--- 186 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 GQGAI +E + K L + + + ER+ + L+ Sbjct: 187 ---------------ELGQGAIGLEVRKGDAKILRLTDQLLDHKSSLACLAERSLMRTLE 231 Query: 242 GSCKSAIAGFAYCKGS---TLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDAAQY 295 G C I TL IV++ DG E + + +A +G++ A Sbjct: 232 GGCSVPIGVETEWIDKPDATLRIRAIVVSIDGTQSVEDTTDTVVHTKEEATALGQELAAR 291 Query: 296 IRFISNKNVF 305 + + Sbjct: 292 LLEAGAAAIL 301 >gi|110801892|ref|YP_698741.1| porphobilinogen deaminase [Clostridium perfringens SM101] gi|123047375|sp|Q0ST16|HEM3_CLOPS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|110682393|gb|ABG85763.1| hydroxymethylbilane synthase [Clostridium perfringens SM101] Length = 291 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 98/292 (33%), Positives = 153/292 (52%), Gaps = 6/292 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LA + L + + + T+GDR + +L +IGGKGLF Sbjct: 3 LIIATRKSKLAQVQTEKVMELLKKKENVDSKK---LLVMTEGDRRLDVSLNKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L + Sbjct: 60 KEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI Sbjct: 120 RIGTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + + F P+ GQGA+ IE + + + K ++ ++ +V ER+F+ L+G C Sbjct: 180 SDYFDPKVFLPAIGQGALGIECLKDG-EFNDYFKALDSKEVRTTVEAERSFMKVLNGGCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 S I ++ K + LY G + + GN+ D I +G+ A+ I Sbjct: 239 SLIGAYSEVKDNDLYMIGT-FTVN-NRIVKKDILGNKEDNILLGKKLAEKIL 288 >gi|302875078|ref|YP_003843711.1| porphobilinogen deaminase [Clostridium cellulovorans 743B] gi|307690298|ref|ZP_07632744.1| porphobilinogen deaminase [Clostridium cellulovorans 743B] gi|302577935|gb|ADL51947.1| porphobilinogen deaminase [Clostridium cellulovorans 743B] Length = 300 Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats. Identities = 103/303 (33%), Positives = 158/303 (52%), Gaps = 10/303 (3%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 KK RIGTR S LAL ++ H P N ++ +STKGD I +++L GGK Sbjct: 1 MKKIIRIGTRKSKLALMQTNIVIDAIKKKH--PEINCEVVEMSTKGDEILDKSLLSFGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD- 120 G F E EK + SGEID AVHSAKDMP LL GL+I A RED RDV ++ + + Sbjct: 59 GAFVSEFEKAIKSGEIDLAVHSAKDMPMDLLTGLKIVAVTKREDPRDVLVTANNKDTIND 118 Query: 121 -LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 + +IGT+SLRRK + R +++ D RG ++ RL KL + + I+LA AG+KRL Sbjct: 119 FNKTNKLIGTTSLRRKLQIKRLLNNVDTKDLRGNVQRRLEKLISGEYDGIILAAAGLKRL 178 Query: 180 K---KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 E++ L++EDF P+ GQG I +E + I++E+ S+ ER Sbjct: 179 GLLDDERINLNYLSVEDFIPAGGQGIIAVEGRAEEEFSFLKDS-IHNEEAMYSLEVERYV 237 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + +L+ C I +++ T++ I+ +GK+ + + + + + + I Sbjct: 238 MKKLNAGCNEPIGAYSFIDKDTIFLD-IIYEHNGKVS-RKKGSDSIENRLKLTEKLVEEI 295 Query: 297 RFI 299 Sbjct: 296 LQE 298 >gi|195014661|ref|XP_001984055.1| GH15218 [Drosophila grimshawi] gi|193897537|gb|EDV96403.1| GH15218 [Drosophila grimshawi] Length = 612 Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats. Identities = 100/305 (32%), Positives = 147/305 (48%), Gaps = 24/305 (7%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K Sbjct: 6 KDKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKIGEK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119 LFT ++E L +G +D VHS KD+PT L G+ + A L RED RD + Sbjct: 64 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAVGAVLEREDARDALVLRENLKGHTI 123 Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 +L SVIGTSSLRR A + R D+ V D RG + TRL KL+ ++K I+LA AG+ Sbjct: 124 ANLPKGSVIGTSSLRRTAQIRRQYPDLIVCDIRGNLNTRLAKLDAKDSKFAGIILAQAGL 183 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ I ++L D + GQGA+ +E N+ + +++ + +T + ER+F Sbjct: 184 VRMGWMARISQVLEPTDLLYAVGQGALAVECRANDNQVLGMLQKLMCLNTTCRILAERSF 243 Query: 237 LAELDGSCKSAIAGFAYCKGS-----------------TLYFYGIVLASDGKIFHEVSRN 279 L L G C + +A ++ G L G V + DG I + Sbjct: 244 LKTLGGGCSAPVAVWSNLNGEPSSINREQLLQQQQQEVGLSLTGAVWSLDGAIEIREHLD 303 Query: 280 GNRCD 284 D Sbjct: 304 CALND 308 >gi|88607872|ref|YP_505325.1| porphobilinogen deaminase [Anaplasma phagocytophilum HZ] gi|88598935|gb|ABD44405.1| porphobilinogen deaminase [Anaplasma phagocytophilum HZ] Length = 304 Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats. Identities = 102/295 (34%), Positives = 160/295 (54%), Gaps = 4/295 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+ A ++++ + + II + T GD T+ L +IGGKGLF Sbjct: 7 IRIGTRGSLLAMQQARIVKTAIETNYA--ELSTRIITIKTSGDMNTHVPLYDIGGKGLFI 64 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L+ ID AVHSAKD+P + L I LPR D F+S S+ L L++ Sbjct: 65 KEIEEALLDNIIDVAVHSAKDVPGIYSEDLDIPCILPRASALDAFLSSKYDSIASLPLNA 124 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS+RRK LL R D+ +I RG +ETR++K+ + I+LA AG+ R+ K+ +I Sbjct: 125 KIGTSSVRRKVQLLTMRPDLEIIPMRGNVETRISKMQMGECDGIVLAEAGLYRVSKDNLI 184 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L E + GQGAIC++ + + E++K +N ++ +V+ ER+F+ +DGSC Sbjct: 185 SEVLQPEVMLGAVGQGAICVQCRRYDRRILEILKKLNCHKSYTTVSAERSFMRAVDGSCN 244 Query: 246 SAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + +A A L ++ D + R +A + G + ++ Sbjct: 245 TPLAAMAKYIDMDILTMKCMLAD-DARNMVFTERVFAEQNAESAGYEMGTLLKNE 298 >gi|110800724|ref|YP_696126.1| porphobilinogen deaminase [Clostridium perfringens ATCC 13124] gi|169347253|ref|ZP_02866192.1| porphobilinogen deaminase [Clostridium perfringens C str. JGS1495] gi|123344731|sp|Q0TQG4|HEM3_CLOP1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|4239996|dbj|BAA74781.1| hydroxymethylbilane synthase [Clostridium perfringens] gi|110675371|gb|ABG84358.1| porphobilinogen deaminase [Clostridium perfringens ATCC 13124] gi|169296649|gb|EDS78780.1| porphobilinogen deaminase [Clostridium perfringens C str. JGS1495] Length = 291 Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats. Identities = 98/292 (33%), Positives = 153/292 (52%), Gaps = 6/292 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LA + L + + + + T+GDR + +L +IGGKGLF Sbjct: 3 LIIATRKSKLAQVQTEKVMELLKEKENVDSKK---LLVMTEGDRRLDVSLNKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L + Sbjct: 60 KEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI Sbjct: 120 RIGTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + + F P+ GQGA+ IE + + K ++ ++ +V ER+F+ L+G C Sbjct: 180 SDYFDPKVFLPAIGQGALGIECLKGG-EFNDYFKALDSKEVRTTVEAERSFMKVLNGGCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 S I ++ K + LY G + + GN+ D I +G+ A+ I Sbjct: 239 SLIGAYSEVKDNDLYMIGT-FTVN-NRIVKKDILGNKEDNILLGKKLAEKIL 288 >gi|254292449|ref|YP_003058472.1| porphobilinogen deaminase [Hirschia baltica ATCC 49814] gi|254040980|gb|ACT57775.1| porphobilinogen deaminase [Hirschia baltica ATCC 49814] Length = 323 Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats. Identities = 103/300 (34%), Positives = 152/300 (50%), Gaps = 7/300 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +IG R SPLA+ A + + ++ I I +T GD++ ++ L + GGK Sbjct: 17 STQIVKIGARGSPLAVQQAEDFAARFKEIVGN-TVEIEIHTFTTSGDQLLDKRLQDAGGK 75 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLFT E++ +SG ID VHS KD+PT L GLQ+ YLPRED RD DL Sbjct: 76 GLFTRELDIAQLSGRIDIVVHSLKDVPTVLPDGLQMGCYLPREDPRDALFGKVGNIK-DL 134 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GT+SLRR A L R D+ ++ FRG ++TRL KL +A A LLA AG+ RL Sbjct: 135 PHGATLGTASLRRSAQALALRPDLKIVMFRGNVQTRLRKLEEGQADATLLAAAGLNRLGM 194 Query: 182 EKVIKEILNIEDFPPSPGQGAICIE-THVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + E+ P+ GQG +C T+ + I+ ++ + ERAFL L Sbjct: 195 TDKAAGFMPKEEMLPACGQGIVCTTLTNNAEDWIFKACLQIDVLESRIAAIAERAFLKRL 254 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGRDAAQYI 296 DGSC++ IAG + + G VLA DG + + A ++G + + + Sbjct: 255 DGSCRTPIAGHLSFNETGVDMRGEVLADDGSKRWFSQMSLDTIPDENQAASLGFELGEKV 314 >gi|312127739|ref|YP_003992613.1| porphobilinogen deaminase [Caldicellulosiruptor hydrothermalis 108] gi|311777758|gb|ADQ07244.1| porphobilinogen deaminase [Caldicellulosiruptor hydrothermalis 108] Length = 290 Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats. Identities = 96/294 (32%), Positives = 149/294 (50%), Gaps = 6/294 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RIG R S L+ + +P+ TKGD ++L + G Sbjct: 1 MKKLRIGARDSRLSRIQVDIVARKIKQTL---GIECEFVPIKTKGDIDKTKSLKDFKSPG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F +EIE+ L++ EID AVHS KD+P ++ +I A + RED RDV +S L Sbjct: 58 VFVKEIERALLTREIDLAVHSLKDLPCEIDSNFEIVAVVEREDPRDVLVSKDGVGFYQLK 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ IGTSSLRR+ L R DI V++ RG IETRL+K+ + +++AYA +KRL + Sbjct: 118 PNAKIGTSSLRREVHLKNLREDIQVVNIRGNIETRLSKIESEGLDGVIVAYAALKRLNLD 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I +I + P PGQGAICIE ++P ++ IN + + ER L L G Sbjct: 178 SYVSYIFDINEITPCPGQGAICIECLKDSPYK-SILSKINDVNAYIQTQFERLVLKFLGG 236 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C S+I F +Y + +L G + S G++ D +++ ++ + Sbjct: 237 GCHSSIGVFCKTDQDKIYAFASLLR--GDKLVKASIEGDKADFLSLANKLSKML 288 >gi|327311850|ref|YP_004338747.1| porphobilinogen deaminase [Thermoproteus uzoniensis 768-20] gi|326948329|gb|AEA13435.1| porphobilinogen deaminase [Thermoproteus uzoniensis 768-20] Length = 303 Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats. Identities = 86/300 (28%), Positives = 141/300 (47%), Gaps = 6/300 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+ TR S L+L S+ +V P I+ + T GD + +R L IG KG+F Sbjct: 2 KLRVATRGSKLSLLQTELFIKSIKEVE--PDLEFEIVVVKTTGDLVQDRPLYAIGVKGVF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ ++ G+ D AVHS KD+P+++ + L ++ Y R+ D S + L Sbjct: 60 EKEVNLAVLRGQADVAVHSLKDLPSEIHEDLVVAGYSKRDSPYDAIASTRGYDVWGLPRG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSS+RR A L R D+ + RG ++TR+ K+ + A +LA AG++RL E Sbjct: 120 ARVGTSSVRRGAFLKSIRPDLHIEPLRGNVDTRIGKVLSGAVDAAVLAEAGVRRLYGENP 179 Query: 185 IKE--ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 E + ++ PP PGQG + ++ +L++ + ERAFL E+ G Sbjct: 180 PVEIRRVKPDEIPPPPGQGIVAAVARKDDRGIIDLLRKASDPRAALEARAERAFLKEMGG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C A+ G A + + F + DG V G +G AA+ ++ Sbjct: 240 GCHVAVGGLATATPNGIEFLAGWASVDGSRKVLVKAFG--ESPEEVGVRAARMLKSALGP 297 >gi|312375045|gb|EFR22490.1| hypothetical protein AND_15185 [Anopheles darlingi] Length = 638 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 99/313 (31%), Positives = 147/313 (46%), Gaps = 34/313 (10%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KK R+G+R S LAL + L ++ P I ++T GDR+ N++L +IG K Sbjct: 10 KKTIRVGSRKSELALTQTKHVIARLQKLN--PDVVYEIHTMTTVGDRVLNKSLPKIGEKS 67 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK--- 119 LFT+++E L +G +D VHS KD+PT L G+ I A L RED RD + + Sbjct: 68 LFTKDLEDALRTGGVDFVVHSLKDLPTALPVGMAIGAVLEREDPRDALVLNERHRGSTLA 127 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGIK 177 L S+IGTSSLRR A L R+ ++V D RG + TRL KL+ + K I+LA AG+ Sbjct: 128 SLPRGSLIGTSSLRRSAQLARYYRHLNVCDIRGNLNTRLAKLDADASKFAGIILAQAGLV 187 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + I +++ + + GQGA+ +E N+ ++ + H +T + ER+FL Sbjct: 188 RMGWNERIDQVIEPSEILYAVGQGALAVECRSNDEYILGMLAKLCHLETQCRILTERSFL 247 Query: 238 AELDGSCKSAIAGFAYCKGS---------------------------TLYFYGIVLASDG 270 L G C + +A K L G V + DG Sbjct: 248 RTLGGGCSAPVAVRTELKRQADSDSSNNNNSNVQRKRSSVDTEQGTFQLQVEGAVWSLDG 307 Query: 271 KIFHEVSRNGNRC 283 K S Sbjct: 308 KTEIRTSGECTLD 320 >gi|168206340|ref|ZP_02632345.1| porphobilinogen deaminase [Clostridium perfringens E str. JGS1987] gi|170662220|gb|EDT14903.1| porphobilinogen deaminase [Clostridium perfringens E str. JGS1987] Length = 291 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 98/292 (33%), Positives = 153/292 (52%), Gaps = 6/292 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LA + L + + + + T+GDR + +L +IGGKGLF Sbjct: 3 LIIATRKSKLAQVQTEKVMELLKEKENVDSKK---LLVMTEGDRRLDVSLNKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L + Sbjct: 60 KEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI Sbjct: 120 RIGTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + + F P+ GQGA+ IE + + K ++ ++ +V ER+F+ L+G C Sbjct: 180 SDYFDPKVFLPAIGQGALGIECLKGG-EFNKYFKALDSKEVRTTVEAERSFMKVLNGGCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 S I ++ K + LY G + + GN+ D I +G+ A+ I Sbjct: 239 SLIGAYSEVKDNDLYMIGT-FTVN-NRIVKKDILGNKEDNILLGKKLAEKIL 288 >gi|91773206|ref|YP_565898.1| porphobilinogen deaminase [Methanococcoides burtonii DSM 6242] gi|121684353|sp|Q12WM8|HEM3_METBU RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|91712221|gb|ABE52148.1| porphobilinogen deaminase [Methanococcoides burtonii DSM 6242] Length = 309 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 98/301 (32%), Positives = 153/301 (50%), Gaps = 8/301 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LA+A A L + H + + T GD T+R L E+ G G+F Sbjct: 1 MILGTRGSALAIAQADLVTKMLEEK----GHELTRNVIKTSGDVFTDRPLHEVAGVGVFV 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E++ ++I GE+D AVHS KD+PT L I+A L R+ DV ++ +L +L + Sbjct: 57 RELDDRMIEGEVDIAVHSMKDLPTVRPPELAIAAVLKRDSPYDVLLTADGSTLDELPDGA 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +IGT+S+RR+A LLR+R D++V D RG I TR+ KL + ILLA AG++R+ + + Sbjct: 117 IIGTTSMRRRAQLLRYRPDLNVEDLRGNINTRIQKLKAGQYDGILLAEAGLQRMGWDMDV 176 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L E F PS QG I + T + +A+ V+NHE + ER + +++G C Sbjct: 177 -QRLPAEAFCPSANQGTIVVVTR-ADDEAERACSVLNHERSRMETEVERLLITDVEGGCI 234 Query: 246 SAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 I FA G ++ VLA DG + + + + + + K Sbjct: 235 VPIGSFAQMNEDGDEIHVLVEVLAVDGTREIRIEDDIPVKNYREHALSIGRMLVEMGGKE 294 Query: 304 V 304 + Sbjct: 295 L 295 >gi|294085042|ref|YP_003551802.1| porphobilinogen deaminase [Candidatus Puniceispirillum marinum IMCC1322] gi|292664617|gb|ADE39718.1| porphobilinogen deaminase [Candidatus Puniceispirillum marinum IMCC1322] Length = 347 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 108/313 (34%), Positives = 157/313 (50%), Gaps = 20/313 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P + +R S LA+A A R +L P I P +TKGD I +R L E+GGKG+F Sbjct: 42 PLVLASRASTLAMAQAELVRVALK------PVASRIEPFTTKGDLILDRPLVEVGGKGVF 95 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E+ L++GE D AVHS KDM + G I A LPRED RD + + L L Sbjct: 96 IKELERSLLAGESDAAVHSMKDMESDFAAGTMIGAVLPREDRRDALVG-SYADLDALPDG 154 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +++GTSS+RR+ALLL R D+ + RG I R+ KLN AI+LA AG+KRLK + Sbjct: 155 AIVGTSSVRRRALLLHHRPDLRIKLLRGNINKRIAKLNQGDYDAIILAVAGLKRLKLS-L 213 Query: 185 IKEILNIEDFPPSPGQGAICIETHVN----------NPKAQELVKVINHEDTWDSVNCER 234 L+ + P + QGA+ ++ + + + ++ V ER Sbjct: 214 DYTPLDEKLMPTAAAQGALAVQLCDPSLAQGEKAIRQQAVFDAISPLACVNSTIEVTAER 273 Query: 235 AFLAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 A LA LDGSC + IA A TL G+VL+SDG + ++ +A+ +G Sbjct: 274 AMLAHLDGSCHTPIAASARFVDDKTLRLDGMVLSSDGSAAFRRTMTASKDEAVALGIKVG 333 Query: 294 QYIRFI-SNKNVF 305 + + Sbjct: 334 VALLDDAGGRGFL 346 >gi|195127549|ref|XP_002008231.1| GI11928 [Drosophila mojavensis] gi|193919840|gb|EDW18707.1| GI11928 [Drosophila mojavensis] Length = 632 Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats. Identities = 98/311 (31%), Positives = 147/311 (47%), Gaps = 28/311 (9%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K Sbjct: 6 KEKVIRVGSRKSELALIQTKHVVGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKIGEK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 LFT ++E L +G +D VHS KD+PT L G+ + A L RED RD + + Sbjct: 64 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAVGAVLEREDARDALVLREHLKGHTI 123 Query: 122 ---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 SVIGTSSLRR A + R + V D RG + TRL KL+ ++K I+LA AG+ Sbjct: 124 ASLPKGSVIGTSSLRRTAQIRRQYPHLIVCDIRGNLNTRLAKLDAKDSKFSGIILAQAGL 183 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ I ++L D + GQGA+ +E N+ +++ + +T + ER+F Sbjct: 184 VRMGWMNRISQVLEPTDLLYAVGQGALAVECRANDAHVLGMLQRLMCLNTTCRILAERSF 243 Query: 237 LAELDGSCKSAIAGFAYCKGS---------------------TLYFYGIVLASDGKIFHE 275 L L G C + +A ++ KG L G V + DG I Sbjct: 244 LKTLGGGCSAPVAVWSKLKGEPSNISNGNRQQQQQLKQDEEVGLSLTGAVWSLDGAIEIR 303 Query: 276 VSRNGNRCDAI 286 + ++ Sbjct: 304 EHLDCALNESE 314 >gi|320587748|gb|EFX00223.1| porphobilinogen deaminase [Grosmannia clavigera kw1407] Length = 342 Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats. Identities = 100/329 (30%), Positives = 151/329 (45%), Gaps = 26/329 (7%) Query: 1 MEKKPFR-IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + +GTR S LAL A ++L + P V+ T GDR L +G Sbjct: 1 MASQAIIHVGTRSSALALKQAELVVAALEKAN--PHVKFVVDARETAGDRDKVTPLPNLG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQ 116 KGL+T E E +L+ G++D VHSAKDMPT L G + A RED RD I + Sbjct: 59 -KGLWTTEFETRLVDGDLDLVVHSAKDMPTTLPVGCLLGAIPKREDPRDAVIFPPGSAYK 117 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN---------KAH 167 L DL + S++GTSS+RR A L R + D RG I+TRL KL+ + Sbjct: 118 VLADLPVGSIVGTSSVRRSAQLRRRFPGLEFRDLRGNIDTRLRKLDAPVPGPDGTTVRYD 177 Query: 168 AILLAYAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHED 225 I+LA AG+ R+ I ++L+ + GQGA+ +E + K L++ I + Sbjct: 178 CIILAAAGLIRMGFNDRISQLLDSASSGTLYAVGQGAMAVEIRNGDAKTLALLEPIIDKP 237 Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEVSRNG 280 T + ERA + L+G C I + + T L +++ DGKI + Sbjct: 238 TMLACLAERAVMRALEGGCSVPIGVESAWEAETAASPRLKLQATIVSLDGKIGIDAELTA 297 Query: 281 ---NRCDAINIGRDAAQYIRFISNKNVFN 306 +A +G A+ + + + + Sbjct: 298 MVTTPQEADALGLKVAEDMIGSGAQKILD 326 >gi|115523326|ref|YP_780237.1| porphobilinogen deaminase [Rhodopseudomonas palustris BisA53] gi|115517273|gb|ABJ05257.1| hydroxymethylbilane synthase [Rhodopseudomonas palustris BisA53] Length = 326 Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats. Identities = 87/320 (27%), Positives = 141/320 (44%), Gaps = 20/320 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-L 63 P RIGTR S +ALA + L ++ I+ T GD L GGKG Sbjct: 4 PVRIGTRKSVMALAQTEDIARRLSAAAS--ELDVEIVKFETVGDSDQVSKLLPHGGKGGA 61 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI-RDVFISHTAQSLKD-- 120 F EI +I+G+++ +HS KDMP I D D + +L + Sbjct: 62 FVAEIRAAVIAGKLEACMHSLKDMPGNEDTPGLIIGATLSRDPATDALVLRKGLTLDELK 121 Query: 121 --LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA------------ 166 IGT+++RR A R ++++I FRG +TR+ KL+N + Sbjct: 122 KSRGKGYTIGTNAVRRAAYAKRLFPEVNIIHFRGAADTRIRKLDNGEMQRLPGGGEVGPA 181 Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226 A+++A +G++R+ I ++ PS GQG + +E +N+ + ++ + +I+ Sbjct: 182 DALIMARSGLERVGFVDRIVHDFTPQEMLPSAGQGIVAVECAINDWQIRKYLAMIDDPVA 241 Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286 S + ER L L+G C S +A F+ GS + VL G +F E SR+G Sbjct: 242 RLSCDAEREVLWVLNGHCNSPMAAFSTINGSDMTLSASVLDETGGLFIEASRSGPANRPR 301 Query: 287 NIGRDAAQYIRFISNKNVFN 306 +GR A + + Sbjct: 302 ELGRAVALDLLNKGAAAIIE 321 >gi|315047640|ref|XP_003173195.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893] gi|311343581|gb|EFR02784.1| porphobilinogen deaminase [Arthroderma gypseum CBS 118893] Length = 342 Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats. Identities = 96/327 (29%), Positives = 146/327 (44%), Gaps = 25/327 (7%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 P RIGTR S LA+ A + L + P H I L T GD+ N L G K Sbjct: 8 NMPLRIGTRRSNLAIVQAKGVQDQLQKI--APDHTFEIEALHTLGDKDQNSALYNFGAKN 65 Query: 63 LFTEEIEKKLISGEIDCAVHSAK-------DMPTKLLKGLQISAYLPREDIRDVFISH-- 113 L+T E+E+ L SG++D VH K DMPT L ++A R+D RD I Sbjct: 66 LWTTELEELLTSGKLDVIVHCLKGECSKNSDMPTNLPDSCDLAAIPLRDDPRDALIVKAG 125 Query: 114 -TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AIL 170 SL+ L ++IGTSS+RR A L R + + RG +ETRL KL++ ++ I+ Sbjct: 126 LPYTSLQTLPEGAIIGTSSVRRSAQLHRLFPSLRFTNIRGNVETRLAKLDDPQSEYTCIV 185 Query: 171 LAYAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD 228 ++ G++R+ I + L +D + GQGA+ +E + K L+ + + Sbjct: 186 MSACGLERIGLGYRISQRLGSKDGGILHAIGQGALGLEVRKGDTKILHLLDQLVDHKSSL 245 Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGST------LYFYGIVLASDGKIFHEVSRNG-- 280 + ERA + L+G C I L IV++ DG E S N Sbjct: 246 ACLAERALMRTLEGGCSVPIGVETEWLDEGEAADPILEMRAIVVSLDGSQCVEDSINAAV 305 Query: 281 -NRCDAINIGRDAAQYIRFISNKNVFN 306 + +A +G++ A + + Sbjct: 306 HTKDEATVLGQELAARMLKAGAATILE 332 >gi|9971935|gb|AAG10497.1|AF279106_59 predicted porphobilinogen deaminase [uncultured marine gamma proteobacterium EBAC31A08] Length = 303 Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats. Identities = 103/302 (34%), Positives = 153/302 (50%), Gaps = 6/302 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR S LA+ A L+ KI + ++P++++GD+ T++ L EIGGKGLF Sbjct: 2 KIRIATRQSELAMYQAKFVADELLA--KINNIKVELVPMTSEGDQ-TDKPLHEIGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E L + E D AVHS KD+P KL +I + RE D+ +S +S + A + Sbjct: 59 ISTLESSLEADEADIAVHSLKDVPAKLDPKFKIISVFSRESPEDLLLSKDGKSFSEFARN 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S IGTS RRKA + R DI I RG I TR+ KLN+ +++A A IKRL ++ Sbjct: 119 STIGTSGPRRKAQINNLRPDIKTIPVRGNIATRIKKLNDGLFDGLVVAKAAIKRLGLKQN 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E +IE+ PS QG I IE + EL++ I + ER+F+A ++G+C Sbjct: 179 SYE-FSIEEMLPSASQGYIAIECLSDKKDIIELLENIGDPKELILASAERSFVAAMEGTC 237 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-AINIGRDAAQYIRFISNKN 303 S IA K + G +L+ +G + + D AI+I A K+ Sbjct: 238 LSPIAILCEDKNGQIKISGKILSYEGNEKIYKEKISSFQDIAIDI-MLFADEFILEGAKS 296 Query: 304 VF 305 + Sbjct: 297 LI 298 >gi|242763889|ref|XP_002340664.1| hydroxymethylbilane synthase, putative [Talaromyces stipitatus ATCC 10500] gi|218723860|gb|EED23277.1| hydroxymethylbilane synthase, putative [Talaromyces stipitatus ATCC 10500] Length = 335 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 97/320 (30%), Positives = 144/320 (45%), Gaps = 17/320 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+K F IGTR S LALA + +L + P + I T GDR ++ K Sbjct: 9 ERKTFNIGTRKSKLALAQTYMVVDALKKEY--PQYEFNIKSKDTAGDRDKITAFKDMQTK 66 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119 L+TEE+E+ LI G++D VHS KD+PT L + LPRED RDV I Sbjct: 67 NLWTEELEELLIGGQLDFIVHSLKDVPTLLPPTCALGGVLPREDPRDVLIVKPGLPYTSL 126 Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176 ++ SV+GTSS+RR A L + V RG I+TRL KL+ I+LA AG+ Sbjct: 127 AEIPAGSVVGTSSIRRTAQLAMKFPHLKVQSLRGNIDTRLAKLDGEDSPYTCIILAAAGL 186 Query: 177 KRLKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R I + L+ + GQGAI IE ++ E++ + + T+ V ER Sbjct: 187 LRTGMGHRITQYLDSRSGSLLYAVGQGAIGIEVRSDDGLVLEMLNKVGDQKTFKEVLAER 246 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNG---NRCDAI 286 + L ++G C + + + L+ I+++ DGK + A Sbjct: 247 SLLRTIEGGCSAPLGVESEWINEVEGTTKLHVRSIIVSVDGKRHSTAELEKVIESAAAAE 306 Query: 287 NIGRDAAQYIRFISNKNVFN 306 G + AQ + + Sbjct: 307 TFGLELAQELIANGAGPILE 326 >gi|296534852|ref|ZP_06897187.1| hydroxymethylbilane synthase [Roseomonas cervicalis ATCC 49957] gi|296264818|gb|EFH11108.1| hydroxymethylbilane synthase [Roseomonas cervicalis ATCC 49957] Length = 304 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 111/309 (35%), Positives = 153/309 (49%), Gaps = 14/309 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R G+R SPLAL ++L + +PLST GD R L E+GGKGLF Sbjct: 1 PLRAGSRASPLALRQTAMVLAAL------GETPCLTVPLSTSGDAEPRRRLAELGGKGLF 54 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL--- 121 +EI + L+ G ID AVHS KD+ T+L GL I+A LPRED RD + A ++ Sbjct: 55 AKEIHEALLDGRIDFAVHSLKDLETELPPGLVIAACLPREDARDALLLAPACPPEERALP 114 Query: 122 ----ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 + + IGT+S RR A L R D+ RG ++TRL++L A LLA AG+K Sbjct: 115 LGFLPVGARIGTASARRAAQLRHLRPDLRFGLLRGNVQTRLHRLEQGDFAATLLAMAGLK 174 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL IL+ E+ P+ GQG I I N +E + I+H T + ERA L Sbjct: 175 RLDLAARASRILSPEEMLPAAGQGVIAITARAGNEALREKLAGIDHAATRLAAAAERALL 234 Query: 238 AELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 A L+GSC++ + A L+ G+V DG +G +A IG + Sbjct: 235 AALEGSCRTPVGAHATLDAEGRLHLTGLVAREDGTFLLRRRLSGPASEAARIGATLGAEL 294 Query: 297 RFISNKNVF 305 R S ++ Sbjct: 295 RADSPADLL 303 >gi|291563543|emb|CBL42359.1| porphobilinogen deaminase [butyrate-producing bacterium SS3/4] Length = 827 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 97/307 (31%), Positives = 149/307 (48%), Gaps = 16/307 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +++ RIGTR S LAL ++ P ++PL TKGD+I +L GGK Sbjct: 5 KRRTIRIGTRKSRLALVQTKMVAEAIEA--SCPEAKCELVPLMTKGDKILKTSLVAFGGK 62 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G F EE E+ L++G+ID AVHSAKDMP L GL I A L RED RDVF+ T + Sbjct: 63 GAFVEEFEQSLLNGDIDLAVHSAKDMPMDLSDGLCIGAVLKREDPRDVFV--TVKGRTPE 120 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +IGT S RR+ ++ D+ RG ++TRL KL + I+LA AG+ RL Sbjct: 121 RSPRIIGTGSPRRQVQIMEH-GDMECRLLRGNVDTRLEKLYQGEYDGIILAAAGLNRLGL 179 Query: 182 EKVI---KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 E L E F P+ GQG I +E + +++K +N ++ ++ ER L Sbjct: 180 FNDPRFSFEFLEPEMFLPAGGQGIIAVEAK-KGSEVLKILKKLNDKEAERALFAERKVLR 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L C +A+ +A + T + + +G +G +++ + A+ + Sbjct: 239 LLGAGCTAAVGVYAKEENGTFWMGLMRETKNG--LIRRKISGAPENSMKL----AELLVK 292 Query: 299 IS-NKNV 304 ++ Sbjct: 293 QGTAGDI 299 >gi|18310417|ref|NP_562351.1| porphobilinogen deaminase [Clostridium perfringens str. 13] gi|168216823|ref|ZP_02642448.1| porphobilinogen deaminase [Clostridium perfringens NCTC 8239] gi|25453024|sp|Q8XKG4|HEM3_CLOPE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|18145097|dbj|BAB81141.1| hydroxymethylbilane synthase [Clostridium perfringens str. 13] gi|182381001|gb|EDT78480.1| porphobilinogen deaminase [Clostridium perfringens NCTC 8239] Length = 291 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 98/294 (33%), Positives = 152/294 (51%), Gaps = 6/294 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LA + L + + + T+GDR + +L +IGGKGLF Sbjct: 3 LIIATRKSKLAQVQTEKVMELLK---GKENVDSKKLLVMTEGDRRLDVSLNKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L + Sbjct: 60 KEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS+RR L +R D+ ++ RG ++TR+ K+ I+LA AG+KRL E VI Sbjct: 120 RIGTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENLDGIILAAAGLKRLGMEDVI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + + F P+ GQGA+ IE + + K ++ ++ +V ER+F+ L+G C Sbjct: 180 SDYFDPKVFLPAIGQGALGIECLKGG-EFNDYFKALDSKEVRTTVEAERSFMKVLNGGCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S I ++ K + LY G + + GN+ D I +G+ A+ I Sbjct: 239 SLIGAYSEVKDNDLYMIGT-FTVN-NRIVKKDILGNKEDNILLGKKLAEKILEE 290 >gi|168214449|ref|ZP_02640074.1| porphobilinogen deaminase [Clostridium perfringens CPE str. F4969] gi|170714079|gb|EDT26261.1| porphobilinogen deaminase [Clostridium perfringens CPE str. F4969] Length = 291 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 99/292 (33%), Positives = 154/292 (52%), Gaps = 6/292 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 I TR S LA + L + + + + T+GDR + +L +IGGKGLF Sbjct: 3 LIIATRKSKLAQVQTEKVMELLKEKENVDSKK---LLVMTEGDRRLDVSLNKIGGKGLFV 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ E AVHS KD+P +L ++ A REDIRD F+S +L +L + Sbjct: 60 KEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSS+RR L +R D+ ++ RG I+TR+ K+ I+LA AG+KRL E+VI Sbjct: 120 RIGTSSIRRAEQLKLFRDDLEIVPIRGNIQTRIKKITEENLDGIILAAAGLKRLGMEEVI 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + + F P+ GQGA+ IE + + K ++ ++ +V ER+F+ L+G C Sbjct: 180 SDYFDPKVFLPAIGQGALGIECLKGG-EFNDYFKALDSKEVRTTVEAERSFMKVLNGGCH 238 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 S I ++ K + LY G + + GN+ D I +G+ A+ I Sbjct: 239 SLIGAYSEVKDNDLYMIGT-FTVN-NRIVKKDILGNKEDNILLGKKLAEKIL 288 >gi|119174394|ref|XP_001239558.1| hypothetical protein CIMG_09179 [Coccidioides immitis RS] Length = 331 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 93/320 (29%), Positives = 148/320 (46%), Gaps = 17/320 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+K F IGTR S LAL R++L P + GD L K Sbjct: 5 ERKTFTIGTRKSQLALVQTDLVRNALQAA--FPDCEFKVHSRDAAGDLNKVTPLRAFTTK 62 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119 L+TEE+E+ LI+ ++D V+S KD+PT++ ++A + RE+ RDV + Sbjct: 63 NLWTEELEELLIAKQVDLVVNSLKDIPTQIPSACVLAAVMKRENPRDVLVLKKGLPSMTL 122 Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 +L SV+GTSS+RR A L R + V D RG I+TRL KL+ + ++LA AG+ Sbjct: 123 AELPPGSVVGTSSVRRIAQLARHYPHLKVQDVRGNIDTRLAKLDAQDGPFSCLILAAAGL 182 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R +E I + L+ + + GQG + IE ++ ++++ I T + ER Sbjct: 183 LRTGREDRISQYLDSTNGKMLHAVGQGGLGIEIRTDDEVMRDMLNKIGDVKTTYTCLAER 242 Query: 235 AFLAELDGSCKSAIAGFA-YCKGST----LYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 + L L+G C + + + + L IV + DGK E+ +GN A Sbjct: 243 SLLRILEGGCSAPLGVETEWIQDDNGKDLLRLRSIVTSVDGKEAVEIEEDGNVQSDEAAE 302 Query: 287 NIGRDAAQYIRFISNKNVFN 306 G++ A + + Sbjct: 303 TFGKEVALKLVARGAGKILE 322 >gi|195376491|ref|XP_002047030.1| GJ12153 [Drosophila virilis] gi|194154188|gb|EDW69372.1| GJ12153 [Drosophila virilis] Length = 618 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 98/308 (31%), Positives = 146/308 (47%), Gaps = 25/308 (8%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++K R+G+R S LAL L ++ P I +ST GDR+ N +L +IG K Sbjct: 6 KEKVIRVGSRKSELALIQTKHVIGRLQKLY--PKQKFEIHTMSTFGDRVLNVSLPKIGEK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 LFT ++E L +G +D VHS KD+PT L G+ + A L RED RD + + Sbjct: 64 SLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAVGAVLEREDARDALVLRENLKGHTI 123 Query: 122 ---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 SVIGTSSLRR A + R + V D RG + TRL KL+ +K I+LA AG+ Sbjct: 124 ATLPKGSVIGTSSLRRTAQIRRQYPHLIVCDIRGNLNTRLAKLDAKESKFAGIILAQAGL 183 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ I ++L D + GQGA+ +E N+ +++ + +T + ER+F Sbjct: 184 VRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDAHVLTMLQKLMCLNTTCRILAERSF 243 Query: 237 LAELDGSCKSAIAGFAYCKGS------------------TLYFYGIVLASDGKIFHEVSR 278 L L G C + +A ++ KG L G V + DG I Sbjct: 244 LKTLGGGCSAPVAVWSNLKGEPSSINANNRQQQQQLEEVGLSLTGAVWSLDGAIEIREHL 303 Query: 279 NGNRCDAI 286 + ++ Sbjct: 304 DCALNESE 311 >gi|13627125|sp|Q49808|HEM3_MYCLE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase Length = 315 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 89/308 (28%), Positives = 144/308 (46%), Gaps = 15/308 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H ++ ++T GD+ ++ ++ +G G+FT Sbjct: 2 IRIGTRGSLLATTQAALVRDALIAN----GHPAELVIVNTAGDQ-SSASIDSLG-VGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + G +D AVHS KD+PT ++A PR D RD ++ L +L S Sbjct: 56 TALRAAIEEGCVDAAVHSYKDLPTADDPRFTVAAIPPRNDPRDAVVTRDELVLAELPAGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + + Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDEV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ P+P QGAI +E + + ++ ++ DT +V ER LAEL+ C Sbjct: 176 TETLDPVQMVPAPAQGAIAVECRAGDSRLVAVLAALDDADTRAAVTAERVLLAELEAGCS 235 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V A DG S A +G A + Sbjct: 236 APVGAIAQVVESIDGEGRVFEELSLRGCVAALDGSDVIRASGISTSGRASELGLAVAVEL 295 Query: 297 RFISNKNV 304 + + + Sbjct: 296 FELGAREL 303 >gi|15828303|ref|NP_302566.1| porphobilinogen deaminase [Mycobacterium leprae TN] gi|221230780|ref|YP_002504196.1| porphobilinogen deaminase [Mycobacterium leprae Br4923] gi|13093996|emb|CAC31937.1| porphobilinogen deaminase [Mycobacterium leprae] gi|219933887|emb|CAR72519.1| porphobilinogen deaminase [Mycobacterium leprae Br4923] Length = 318 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 89/308 (28%), Positives = 144/308 (46%), Gaps = 15/308 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H ++ ++T GD+ ++ ++ +G G+FT Sbjct: 5 IRIGTRGSLLATTQAALVRDALIAN----GHPAELVIVNTAGDQ-SSASIDSLG-VGVFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + G +D AVHS KD+PT ++A PR D RD ++ L +L S Sbjct: 59 TALRAAIEEGCVDAAVHSYKDLPTADDPRFTVAAIPPRNDPRDAVVTRDELVLAELPAGS 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ RL + + Sbjct: 119 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARLGRLDEV 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ P+P QGAI +E + + ++ ++ DT +V ER LAEL+ C Sbjct: 179 TETLDPVQMVPAPAQGAIAVECRAGDSRLVAVLAALDDADTRAAVTAERVLLAELEAGCS 238 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V A DG S A +G A + Sbjct: 239 APVGAIAQVVESIDGEGRVFEELSLRGCVAALDGSDVIRASGISTSGRASELGLAVAVEL 298 Query: 297 RFISNKNV 304 + + + Sbjct: 299 FELGAREL 306 >gi|39934577|ref|NP_946853.1| porphobilinogen deaminase [Rhodopseudomonas palustris CGA009] gi|39648426|emb|CAE26947.1| putative porphobilinogen deaminase [Rhodopseudomonas palustris CGA009] Length = 327 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 94/324 (29%), Positives = 140/324 (43%), Gaps = 20/324 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K P RIGTR S +ALA + L + II T GD L GG Sbjct: 1 MVKFPVRIGTRKSVMALAQTEDIAKQLSAAAS--ELDPQIIKFETVGDSDQISKLLPHGG 58 Query: 61 KG-LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI-RDVFISHTAQSL 118 KG F EI ++ GE+ CA+HS KDMP I A D D + +L Sbjct: 59 KGGAFVAEIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPACDSLVLRKGLTL 118 Query: 119 KD----LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------- 163 ++ IGT+++RR A R ++ VI FRG ++R+ KL+N Sbjct: 119 EELKKSRGKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADSRMRKLDNREKQRMPDGSE 178 Query: 164 -NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 A A+++A AGI+R+ I E+ P+ GQG + +E V+ K ++ + +I+ Sbjct: 179 VGPADALIMARAGIERVGFVDRIAHDFTPEEMLPAAGQGIVAVECPVHEWKTRQYLALID 238 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 + + + ER L L+G C S IA + G + VL +G +F E +R G Sbjct: 239 NHQSRLCCDAEREVLWVLNGHCNSPIAAHSVITGDEMTLRASVLDLEGGMFIEAARTGPA 298 Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306 +GR + V Sbjct: 299 NRPRELGRTVGLELLDKGAAAVIE 322 >gi|85374658|ref|YP_458720.1| porphobilinogen deaminase [Erythrobacter litoralis HTCC2594] gi|84787741|gb|ABC63923.1| porphobilinogen deaminase [Erythrobacter litoralis HTCC2594] Length = 292 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 154/288 (53%), Gaps = 4/288 (1%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 +A A ETR+ L H + ++P+ GD+I +R L EIGGK L+T+E++ L G Sbjct: 1 MAQAVETRNRLCAAHGWDEEAVELVPVVASGDKIQDRPLAEIGGKALWTKELDAWLGEGR 60 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 ID AVHS KD+ T + L I+A LPRED RDV + A ++D+ + +GTS+ RR A Sbjct: 61 IDAAVHSMKDVETFRPEALHIAAILPREDKRDVLV--GAAGIEDIPKGAKVGTSAPRRAA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 +L R D+ V+ FRG + TRL KL +A LLA AG+KRL E I L ++++ P Sbjct: 119 QMLSLRPDVEVVTFRGNVATRLGKLEAGEADVTLLAAAGLKRLG-ELDIGSPLELDEWLP 177 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + QGAI IE ++ A+ L+ I+H + + ERA LA L+G+C S IA A G Sbjct: 178 AAAQGAIGIECRADDAGARALLSPIDHAPSRAEIMAERALLAGLNGTCHSPIAVLAEAMG 237 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + L + + DG D I A + ++ + Sbjct: 238 NRLSIRATLYSPDGTDKVAGEGELALADYAAI-ERLAADLLDRASPAI 284 >gi|239607866|gb|EEQ84853.1| porphobilinogen deaminase [Ajellomyces dermatitidis ER-3] Length = 347 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 93/319 (29%), Positives = 145/319 (45%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K F IGTR S LAL R +L P + I+ D L E K Sbjct: 17 TKTTFTIGTRRSKLALVQTDLVRDALKAA--WPQYEFNILTKDAAADLDKVTPLREFTSK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119 L+TEE+E+ L++ +ID VHS KD+PT++ + + A +PRED RDV + Sbjct: 75 NLWTEELEELLVAKQIDLVVHSLKDVPTQIPETCILGAMMPREDPRDVLVIKKGLPSMTL 134 Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 +L SV+GTSS+RR A L R + D RG I+TRL KL+ + ++LA AG+ Sbjct: 135 AELPAGSVVGTSSVRRIAQLSRHYPQLIAKDVRGNIDTRLAKLDAEDGPFSCLILAAAGL 194 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R + I L+ + + GQG + IE ++ +++V+ I + T + ER Sbjct: 195 LRTGQGDRITYYLDSKHGKMLHAVGQGGLGIEIRADDEHMKQMVEKIGDKKTTLACLAER 254 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 L L+G C + + L IV + DGK E+ ++ + +A Sbjct: 255 NLLRTLEGGCSAPLGVETEWVQDSEGKENLRLRAIVASVDGKEAVEIEKDKDVKSGEEAE 314 Query: 287 NIGRDAAQYIRFISNKNVF 305 G+ A + + + Sbjct: 315 VFGKQVADELVTLGAGRIL 333 >gi|91978235|ref|YP_570894.1| porphobilinogen deaminase [Rhodopseudomonas palustris BisB5] gi|91684691|gb|ABE40993.1| hydroxymethylbilane synthase [Rhodopseudomonas palustris BisB5] Length = 330 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 85/320 (26%), Positives = 140/320 (43%), Gaps = 20/320 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-L 63 P RIGTR S +ALA + L ++ I+ T GD L GGKG Sbjct: 8 PVRIGTRKSVMALAQTEDIAKQLRAAAS--ELDVEIVKFETVGDSDQISKLLPHGGKGGA 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI-RDVFISHTAQSLKD-- 120 F EI +I+G++ A+HS KDMP + D D + +L++ Sbjct: 66 FVAEIRAAVIAGQLQAAMHSLKDMPGNEDTPGLVIGATLARDPATDALVLREGLTLEELK 125 Query: 121 --LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------------NKA 166 IGT+++RR A R +++VI FRG +TR+ KL+ A Sbjct: 126 KSRGKGYTIGTNAVRRAAYAKRLFPEVNVIHFRGAADTRIRKLDAREKQRLPDGGEVGPA 185 Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226 A+++A AG++R+ I ++ PS GQG + +E V++ + + + +I+ + Sbjct: 186 DALIMARAGLERVGFVDRIVHDFTPQEMLPSAGQGIVAVECAVDDWQTRRYLAMIDDPKS 245 Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286 + ER L L+G C S +A + G+ + + VL +G +F E +R+G Sbjct: 246 RLCCDAEREVLWVLNGHCNSPMAAHSTVNGAEMTLHASVLDEEGGLFIETTRSGPANRPR 305 Query: 287 NIGRDAAQYIRFISNKNVFN 306 +GR + V Sbjct: 306 ELGRAVGLDLLDKGAAAVIE 325 >gi|261198286|ref|XP_002625545.1| porphobilinogen deaminase [Ajellomyces dermatitidis SLH14081] gi|239595508|gb|EEQ78089.1| porphobilinogen deaminase [Ajellomyces dermatitidis SLH14081] Length = 347 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 93/319 (29%), Positives = 145/319 (45%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K F IGTR S LAL R +L P + I+ D L E K Sbjct: 17 TKTTFTIGTRRSKLALVQTDLVRDALKAA--WPQYEFNILTKDAAADLDKVTPLREFTSK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119 L+TEE+E+ L++ +ID VHS KD+PT++ + + A +PRED RDV + Sbjct: 75 NLWTEELEELLVAKQIDLVVHSLKDVPTQIPETCILGAMMPREDPRDVLVIKKGLPSMAL 134 Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 +L SV+GTSS+RR A L R + D RG I+TRL KL+ + ++LA AG+ Sbjct: 135 AELPAGSVVGTSSVRRIAQLSRHYPQLIAKDVRGNIDTRLAKLDAEDGPFSCLILAAAGL 194 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R + I L+ + + GQG + IE ++ +++V+ I + T + ER Sbjct: 195 LRTGQGDRITYYLDSKHGKMLHAVGQGGLGIEIRADDEHMKQMVEKIGDKKTTLACLAER 254 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 L L+G C + + L IV + DGK E+ ++ + +A Sbjct: 255 NLLRTLEGGCSAPLGVETEWVQDSEGKENLRLRAIVASVDGKEAVEIEKDKDVKSGEEAE 314 Query: 287 NIGRDAAQYIRFISNKNVF 305 G+ A + + + Sbjct: 315 VFGKQVADELVTLGAGRIL 333 >gi|299132980|ref|ZP_07026175.1| porphobilinogen deaminase [Afipia sp. 1NLS2] gi|298593117|gb|EFI53317.1| porphobilinogen deaminase [Afipia sp. 1NLS2] Length = 325 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 91/324 (28%), Positives = 143/324 (44%), Gaps = 22/324 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR S +A+A E L V + I+ T GD L+ GG Sbjct: 1 MASDRLRIGTRKSAMAIAQTEEIARRLKAV----GTEVEIVKFETMGDIDQAGKLSPHGG 56 Query: 61 KG-LFTEEIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHTAQSL 118 KG F +I + +++G + A+HS KD+P + GL I A L R+ DV + S+ Sbjct: 57 KGGAFVAQIREAVLNGRLHAAMHSLKDVPGNEDTPGLVIGAALSRDPPGDVLVLRPGTSV 116 Query: 119 KD----LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN----------- 163 + IGT+S+RR A + R +I VI FRG ++R+ KL+ Sbjct: 117 DELKRTRGKGFEIGTNSVRRAAYVRRLFPEIEVIHFRGAADSRVRKLDQRAKQKLPDGGA 176 Query: 164 -NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 A A+++A +G++R+ + I +I + P+ GQG + +E + + + ++ I+ Sbjct: 177 VGPADALIMARSGLERVGLKSRIAYEFSIAEMLPAVGQGIVAVECAARDFETRYILSAID 236 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 + ER L L+G C S IAGFA G+ + VL G E SR G Sbjct: 237 DASAHACADAEREVLWVLNGHCNSPIAGFAEIMGTEMQLAASVLDHAGSRIIEASRVGCA 296 Query: 283 CDAINIGRDAAQYIRFISNKNVFN 306 +GR + + Sbjct: 297 SRPRELGRAVGMELLARGAAEIIE 320 >gi|157964647|ref|YP_001499471.1| porphobilinogen deaminase [Rickettsia massiliae MTU5] gi|189028151|sp|A8F1Y8|HEM3_RICM5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|157844423|gb|ABV84924.1| Porphobilinogen deaminase [Rickettsia massiliae MTU5] Length = 351 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 99/257 (38%), Positives = 149/257 (57%), Gaps = 4/257 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR SPLAL H + P N I+P+ T GD I N+ L +IGG Sbjct: 1 MTN-SIRIGTRKSPLALIHTNLVIQQIKQF--FPDINCKIVPIITSGDLIQNKPLYDIGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K LF +EIE+ L+ +ID AVHS KD+P ++ + L I+A L RED RDVF+ +S+++ Sbjct: 58 KALFLKEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEE 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L ++VIG+S++RRKA + + R D+ V FRG +++R+ KL + A +LAY G+KRL+ Sbjct: 118 LPQNAVIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLE 177 Query: 181 -KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 ++ P GQG I +E ++ ++ INH T++ + ERAFL Sbjct: 178 AFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLKICNQINHLPTFELIKPERAFLEY 237 Query: 240 LDGSCKSAIAGFAYCKG 256 LD +C++ IA ++ Sbjct: 238 LDANCRTPIAAYSQYLD 254 >gi|332981813|ref|YP_004463254.1| porphobilinogen deaminase [Mahella australiensis 50-1 BON] gi|332699491|gb|AEE96432.1| porphobilinogen deaminase [Mahella australiensis 50-1 BON] Length = 292 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 103/286 (36%), Positives = 152/286 (53%), Gaps = 4/286 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 R+G+R S LALA S+L ++ P + + T+GDR+ + + IG KG Sbjct: 1 MNKIRVGSRGSRLALAQTDAVISALRSLY--PDIDFERQIVKTEGDRLQHIPVERIGDKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F ++IE+ L+ G ID AVHS KD+P++L GL I A RED RD FIS ++++ L Sbjct: 59 IFVKDIEQALMDGHIDMAVHSMKDVPSQLPDGLMIGAMPWREDPRDAFISSDGRTIEQLG 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + IG S RR A L I ++ RG I+TR+NK+N I+LA AG+KRL Sbjct: 119 CRARIGIGSARRSAQLKNCFPGIDIVAIRGNIDTRINKINEAGLDGIVLAVAGLKRLGVS 178 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 VI +IL ++ P+ GQGA+ IE ++ KA +L+ +NH T +V+ ER F+A + G Sbjct: 179 DVITQILPVDVCTPAAGQGALGIEIRKSDEKAADLLMPLNHAPTRAAVDAERMFMAMMGG 238 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 C + I + G + V DG S G N+ Sbjct: 239 DCNTPIGVYGEVDGVDILLRAAV-EKDG-CIMRHSVKGEVAQYQNV 282 >gi|311895732|dbj|BAJ28140.1| putative porphobilinogen deaminase [Kitasatospora setae KM-6054] Length = 323 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 102/314 (32%), Positives = 159/314 (50%), Gaps = 16/314 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIGTR SPLALA ++L + +P +P++T+ D L ++GGKGL Sbjct: 9 RTLRIGTRSSPLALAQTDMVVAALRE--HVPDLVAETVPVTTEADLWQG-DLAQLGGKGL 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTK--LLKGLQISAYLPREDIRDVFISHTAQSLK-- 119 +T++I+ L +G +D AVH KD+P L +GL +AY+ R D+RDV + + Sbjct: 66 YTKQIDAMLQAGAVDMAVHCVKDVPGDVPLPRGLVFAAYMERPDVRDVLLFPEGSGYRTL 125 Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-----KAHAILLAY 173 DL +VI +S++RRKA +LR R D+ V+ RG + +RL KL+ A ++LA Sbjct: 126 ADLPPGAVILSSAVRRKAQILRARPDLEVVRVRGAVGSRLEKLDGAKQIDVHADGMVLAA 185 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG+ RL E +L++++ P+ G G + +E +P L++ INH T V E Sbjct: 186 AGLARLGIE-RPGYVLSMDEMLPAVGAGVLGLECRQGDPATAALLEKINHPRTQREVTAE 244 Query: 234 RAFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRN-GNRCDAINIGRD 291 R L L G C S IAG+ + L G+V +G F +R D +G Sbjct: 245 RVLLHNLRGHCNSPIAGYCTTEPDGQLSLRGMVFDREGSKFANAMLWNEHRQDPATLGAR 304 Query: 292 AAQYIRFISNKNVF 305 A + + + Sbjct: 305 VAAELLRQGAREII 318 >gi|89889812|ref|ZP_01201323.1| porphobilinogen deaminase [Flavobacteria bacterium BBFL7] gi|89518085|gb|EAS20741.1| porphobilinogen deaminase [Flavobacteria bacterium BBFL7] Length = 317 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 101/317 (31%), Positives = 159/317 (50%), Gaps = 19/317 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LA+ A +S L + + P+ ++GD + L E+G Sbjct: 1 MSLK-IRIGTRDSQLAMWQATTVQSQLNAL----GFQTELAPVKSQGDLNLDEPLYEMGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT+ ++ L+ G+ID AVHS KD+PT+L KG+ +A L R +D+ + ++ + + Sbjct: 56 TGIFTKTLDVALVKGDIDIAVHSLKDVPTQLPKGMVQAAVLERASQKDILVYKSSFNPDE 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-KAHAILLAYAGIKRL 179 I T SLRRKA L + V+D RG + TRL+KL++N +A + A AG+ R+ Sbjct: 116 A---MTIATGSLRRKAQWLNMYAQHHVVDLRGNVNTRLSKLHSNKDWNAAIFAKAGLDRI 172 Query: 180 K-----KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 + E +++ F P+P QGAI I +N E V +NH T V+ ER Sbjct: 173 GLLSQLRGNYGFEYSDLDSFVPAPAQGAIMIAAMGHNTAVLEAVSQLNHAQTQRCVDIER 232 Query: 235 AFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA-INIGRDAA 293 FL EL+G C + I A + + F G +L+ DG +V N + +++G A Sbjct: 233 RFLRELEGGCTAPIGAIAQVHDNKIDFTGCLLSIDGTERIDVKDQINLTETDVDLGLAFA 292 Query: 294 ----QYIRFISNKNVFN 306 + + K + Sbjct: 293 KAQSEKVFAKGGKAMME 309 >gi|467039|gb|AAA17223.1| hem3b [Mycobacterium leprae] Length = 315 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 88/308 (28%), Positives = 143/308 (46%), Gaps = 15/308 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA A R +L+ H ++ ++T GD+ ++ ++ +G G+FT Sbjct: 2 IRIGTRGSLLATTQAALVRDALIAN----GHPAELVIVNTAGDQ-SSASIDSLG-VGVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + G +D AVHS KD+PT ++A PR D RD ++ L +L S Sbjct: 56 TALRAAIEEGCVDAAVHSYKDLPTADDPRFTVAAIPPRNDPRDAVVTRDELVLAELPAGS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS RR A L + + RG ++TRLN++++ AI++A AG+ R + + Sbjct: 116 LVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNRVSSGDLDAIVVARAGLARPGRLDEV 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+ P+P QGAI +E + + ++ ++ DT +V ER LAEL+ C Sbjct: 176 TETLDPVQMVPAPAQGAIAVECRAGDSRLVAVLAALDDADTRAAVTAERVLLAELEAGCS 235 Query: 246 SAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + A L G V A DG S A +G A + Sbjct: 236 APVGAIAQVVESIDGEGRVFEELSLRGCVAALDGSDVIRASGISTSGRASELGLAVAVEL 295 Query: 297 RFISNKNV 304 + + + Sbjct: 296 FELGAREL 303 >gi|303314269|ref|XP_003067143.1| porphobilinogen deaminase family protein [Coccidioides posadasii C735 delta SOWgp] gi|240106811|gb|EER24998.1| porphobilinogen deaminase family protein [Coccidioides posadasii C735 delta SOWgp] gi|320037407|gb|EFW19344.1| porphobilinogen deaminase [Coccidioides posadasii str. Silveira] Length = 331 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 92/319 (28%), Positives = 148/319 (46%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+K F IGTR S LAL R++L P + GD L K Sbjct: 5 ERKTFTIGTRKSQLALVQTDLVRNALQAA--FPDCEFKVHSRDAAGDLNKVTPLRAFTTK 62 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119 L+TEE+E+ LI+ ++D V+S KD+PT++ ++A + RE+ RDV + Sbjct: 63 NLWTEELEELLIAKQVDLVVNSLKDIPTQIPTACVLAAVMKRENPRDVLVLKKGLPSMTL 122 Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 +L SV+GTSS+RR A L R + V D RG I+TRL KL+ + ++LA AG+ Sbjct: 123 AELPPGSVVGTSSVRRIAQLARHYPHLKVQDVRGNIDTRLAKLDAQDGPFSCLILAAAGL 182 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R +E I + L+ + + GQG + IE ++ ++++ I T + ER Sbjct: 183 LRTGREDRISQYLDSTNGKMLHAVGQGGLGIEIRTDDEVMRDMLNKIGDVKTTYACLAER 242 Query: 235 AFLAELDGSCKSAIAGFA-YCKGST----LYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 + L L+G C + + + + L IV + DGK E+ +G+ A Sbjct: 243 SLLRILEGGCSAPLGVETEWIQDDNGKDLLRLRSIVTSVDGKEAVEIEEDGDVQSDEAAE 302 Query: 287 NIGRDAAQYIRFISNKNVF 305 G++ A + + Sbjct: 303 TFGKEVALKLVARGAGKIL 321 >gi|327355808|gb|EGE84665.1| porphobilinogen deaminase [Ajellomyces dermatitidis ATCC 18188] Length = 347 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 93/319 (29%), Positives = 144/319 (45%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K F IGTR S LAL R +L P + I+ D L E K Sbjct: 17 TKTTFTIGTRRSKLALVQTDLVRDALKAA--WPQYEFNILTKDAAADLDKVTPLREFTSK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119 L+TEE+E+ L++ +ID VHS KD+PT++ + + A +PRED RDV + Sbjct: 75 NLWTEELEELLVAKQIDLVVHSLKDVPTQIPETCILGAMMPREDPRDVLVIKKGLPSMTL 134 Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 +L SV+GTSS+RR A L R + D RG I+TRL KL+ + ++LA AG+ Sbjct: 135 AELPAGSVVGTSSVRRIAQLSRHYPQLIAKDVRGNIDTRLAKLDAEDGPFSCLILAAAGL 194 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R + I L + + GQG + IE ++ +++V+ I + T + ER Sbjct: 195 LRTGQGDRITYYLGSKHGKMLHAVGQGGLGIEIRADDEHMKQMVEKIGDKKTTLACLAER 254 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 L L+G C + + L IV + DGK E+ ++ + +A Sbjct: 255 NLLRTLEGGCSAPLGVETEWVQDSEGKENLRLRAIVASVDGKEAVEIEKDKDVKSGEEAE 314 Query: 287 NIGRDAAQYIRFISNKNVF 305 G+ A + + + Sbjct: 315 VFGKQVADELVTLGAGRIL 333 >gi|312793378|ref|YP_004026301.1| porphobilinogen deaminase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180518|gb|ADQ40688.1| porphobilinogen deaminase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 290 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 104/294 (35%), Positives = 150/294 (51%), Gaps = 6/294 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K RIG R S L+ + +P+ TKGD ++L E G Sbjct: 1 MKKLRIGARDSRLSRIQVDIVARKIKQTL---GIECEFVPIKTKGDIDKTKSLKEFKSPG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F +EIE L+S EID AVHS KD+P ++ +I A + RED RDV +S L Sbjct: 58 VFVKEIELALLSREIDLAVHSLKDLPCEMDSNFEIVAVVEREDPRDVLVSKDGLGFYQLK 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ IGTSSLRR+ L R DI VI+ RG IETRL+K+ + I+LAYA +KRLK + Sbjct: 118 SNAKIGTSSLRREVHLKNLREDIQVINIRGNIETRLSKIQSEGLDGIVLAYAALKRLKLD 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + I +I + P PGQGAICIE ++P ++ IN D + ER L L G Sbjct: 178 SYVSYIFDINEITPCPGQGAICIECLKDSPYK-SILSKINDADAYIQTQFERLVLKFLGG 236 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C S+I F + +Y + +L G + S GN+ D +++ ++ + Sbjct: 237 GCHSSIGVFCKTDQNKIYAFASLLR--GDKLVKASIEGNKDDFLSLANKLSKML 288 >gi|189220198|ref|YP_001940838.1| Porphobilinogen deaminase [Methylacidiphilum infernorum V4] gi|189187056|gb|ACD84241.1| Porphobilinogen deaminase [Methylacidiphilum infernorum V4] Length = 298 Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 108/300 (36%), Positives = 155/300 (51%), Gaps = 5/300 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KP IG+R S LAL A SL + P +I I + T GD + + + +I +G Sbjct: 1 MKPLIIGSRGSRLALIQAQLIVDSLKKEY--PLLDIQIRVIKTTGDHLEAQPIRDIDQRG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +FT+EIE KL+ GEID AVHS KD+ +L L I+A PRED RD +IS L Sbjct: 59 IFTKEIENKLLEGEIDLAVHSLKDLQVELHPRLVIAAIPPREDPRDCWISLQHPHPSSLQ 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNKAHAILLAYAGIKRLKK 181 +++ T S RR LLR R D+ ++ RG +E+RL KL N + +LA AGIKRL Sbjct: 119 AGAIVVTGSPRRANQLLRKRPDLRIVPVRGNVESRLRKLRENRQWQGTVLALAGIKRLGI 178 Query: 182 EKVIKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + + P+PGQGA+ ++ + + Q LVK +N T +V ER FL E Sbjct: 179 DISSFFCTPLSMDWMLPAPGQGALALQARIEDKHTQSLVKHLNDFSTACAVTAERVFLHE 238 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L G C++A+ A +GS L GI E G A ++G+ A ++ + Sbjct: 239 LGGGCRTAVGARAEVEGSRLVLEGIWWPQQAIEPKEGKVVGEIHRAEDLGKKLADLLKNL 298 >gi|316935323|ref|YP_004110305.1| porphobilinogen deaminase [Rhodopseudomonas palustris DX-1] gi|315603037|gb|ADU45572.1| porphobilinogen deaminase [Rhodopseudomonas palustris DX-1] Length = 326 Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 95/323 (29%), Positives = 139/323 (43%), Gaps = 20/323 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K P RIGTR S +ALA + L + II T GD L GGK Sbjct: 1 MKFPVRIGTRKSVMALAQTEDIAKQLSAAAS--ELDPQIIKFETVGDSDQISKLLPHGGK 58 Query: 62 G-LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI-RDVFISHTAQSLK 119 G F EI ++ GE+ CA+HS KDMP I A D D + +L+ Sbjct: 59 GGAFVAEIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPACDSLVLRKGLTLE 118 Query: 120 D----LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN----------- 164 D IGT+++RR A R ++ VI FRG ++R+ KL+N Sbjct: 119 DLKKSRGKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADSRMRKLDNGEKQRMPDGSEV 178 Query: 165 -KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223 A A+++A AGI+R+ I E+ P+ GQG + +E V+ K ++ + +I++ Sbjct: 179 GPADALIMARAGIERVGFVDRIAHDFTPEEMLPAAGQGIVAVECPVHEWKTRQYLALIDN 238 Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283 + + ER L L+G C S IA + G + VL +G +F E R G Sbjct: 239 HQSRLCCDAEREVLWVLNGHCNSPIAAHSIITGDEMTLRASVLDLEGGMFIEAVRTGPAN 298 Query: 284 DAINIGRDAAQYIRFISNKNVFN 306 +GRD + V Sbjct: 299 RPRELGRDVGLELLDKGAAAVIE 321 >gi|307826350|ref|ZP_07656554.1| porphobilinogen deaminase [Methylobacter tundripaludum SV96] gi|307732591|gb|EFO03464.1| porphobilinogen deaminase [Methylobacter tundripaludum SV96] Length = 321 Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 87/241 (36%), Positives = 130/241 (53%), Gaps = 2/241 (0%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K RI TR SPLAL A L P ++ ++T+GD+I + L +IGGK Sbjct: 7 TEKIIRIATRRSPLALWQAEHVAERLER--TFPGCRTELVKMTTQGDKILDAPLAKIGGK 64 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 GLF +E+E+ ++ G D AVHS KD+P + +GL ++A L RED D F+S+ +L DL Sbjct: 65 GLFVKELEQGMLEGLADIAVHSMKDVPVEFPEGLHLAAILIREDPTDAFVSNHYATLHDL 124 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++ IGTSSLRR+ + + ++ RG + TRL+KL++ + AI+LA AG+KRL Sbjct: 125 PANARIGTSSLRRQCQIKELYPEAEILSLRGNVNTRLSKLDSGEYDAIILASAGLKRLGM 184 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + I + L+ P+ GQGAI IE + A I +W A + Sbjct: 185 AERITQCLDTSVSLPAIGQGAIGIECRIALLVAGAGAFYIADYASWKVAYFVMATAMSVG 244 Query: 242 G 242 Sbjct: 245 L 245 >gi|312200104|ref|YP_004020165.1| porphobilinogen deaminase [Frankia sp. EuI1c] gi|311231440|gb|ADP84295.1| porphobilinogen deaminase [Frankia sp. EuI1c] Length = 380 Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 93/338 (27%), Positives = 150/338 (44%), Gaps = 46/338 (13%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LALA + L + ++ + T+GDR ++++G G++ Sbjct: 40 LRLGTRRSALALAQSGMVADELRTRL---GIEVDLVHVVTEGDRNRAE-ISQLGSTGVWV 95 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + L+SGE+D AVHS KD+PT +G+ ++A PRED+RDV +S T ++L L + Sbjct: 96 SALREALLSGEVDLAVHSLKDLPTAPPEGITLAAIPPREDVRDVLVSPTGRTLAQLGPGA 155 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGT + RR A L + V+ RG ++TR+ K + + A++LA AG+ RL + I Sbjct: 156 RIGTGAPRRAAQLRALGLGLDVVPIRGNVDTRIKKAIDGEVDAVVLARAGLARLDRLDAI 215 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVK-------------------------- 219 E+L E P+PGQGA+ IE L+ Sbjct: 216 TELLEPEVMLPAPGQGALAIECVATTLAPLTLLTVGTPEDQGAVTGMSCPVAPGSGVEIP 275 Query: 220 -------VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC---------KGSTLYFYG 263 V++ + +V ERAFLA ++ C + + A + Sbjct: 276 LERLLRFVLDDAPSSVAVRAERAFLAAIEAGCTAPVGALAQVLPARGQAPASEGEVRLRA 335 Query: 264 IVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 +V + DG G+ D +GR A + Sbjct: 336 VVASLDGTTVLRRELGGSTADPEALGRRLADDLLSAGA 373 >gi|238499723|ref|XP_002381096.1| hydroxymethylbilane synthase, putative [Aspergillus flavus NRRL3357] gi|220692849|gb|EED49195.1| hydroxymethylbilane synthase, putative [Aspergillus flavus NRRL3357] Length = 337 Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 101/310 (32%), Positives = 149/310 (48%), Gaps = 17/310 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +K F +GTR S LAL+ S+L V+ P + I T GD T E K Sbjct: 16 SRKTFTVGTRKSKLALSQTDLVVSALKKVY--PNYEFKIHSQETAGDLNTTIAFREFTTK 73 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119 L+TEE+E+ L++G +D VHS KD+PT L + + RED RDV + Sbjct: 74 NLWTEELEEHLMAGNVDFIVHSLKDVPTTLPPACTLGPMMEREDSRDVLVIKQGLPNMSL 133 Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176 DL SV+GTSS+RR A L + VID RG I TRL KL+ I+LA AG+ Sbjct: 134 SDLPAGSVVGTSSIRRTAQLALKYPHLKVIDVRGNIGTRLAKLDAEDSPYTCIILAAAGL 193 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 RL + I + L+ ++ + GQGA+ IE ++ ++++ I H +T + ER Sbjct: 194 LRLGLDDRISQYLDSKNGGMLYAVGQGALGIEIRKDDQVMRDMLNNIGHNETTFASTAER 253 Query: 235 AFLAELDGSCKSAIAGFAYCK-----GSTLYFYGIVLASDGKIFHEVSRNGNRCD---AI 286 + L L+G C + + L IV++ DGK EV +G+ A Sbjct: 254 SLLRTLEGGCSAPLGVETEWIKSSDGSKKLRMRSIVVSVDGKESAEVEIDGSVDSVEAAE 313 Query: 287 NIGRDAAQYI 296 + G A+ + Sbjct: 314 DFGVTVAKEL 323 >gi|213406619|ref|XP_002174081.1| porphobilinogen deaminase [Schizosaccharomyces japonicus yFS275] gi|212002128|gb|EEB07788.1| porphobilinogen deaminase [Schizosaccharomyces japonicus yFS275] Length = 335 Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 94/315 (29%), Positives = 149/315 (47%), Gaps = 18/315 (5%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG---KGLF 64 +G+R S LAL L +++ P +N I+ T GD I N+ L E K L+ Sbjct: 13 LGSRKSKLALIQTNLVLKQLKELY--PEYNFPILSRDTVGDEIINKALFEFKTQMAKSLW 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T E+E L+ GE VHS KD+PT L +G+ I+ R D + +S+ +L Sbjct: 71 TRELEVLLMHGECRMLVHSLKDLPTDLPEGMTIACITRRSCPLDAVVMRAGSPYKSVSEL 130 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRL 179 +SV+GTSS+RR+A+L R + D RG + TRL KL+ ++ ++LA AG+ RL Sbjct: 131 PPNSVVGTSSIRRRAMLQRHFPHLKFRDIRGNVGTRLAKLDAPDSPFDCLILAAAGLIRL 190 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I ++L + GQGA+ +E ++ + EL+K + +T S ERA + Sbjct: 191 NLKDRITQMLQAPFVFYAVGQGALAVEVRADDTEIIELLKPLQDMETTYSCLAERALMKR 250 Query: 240 LDGSCKSAIAGFAYC-----KGSTLYFYGIVLASDGKIFHEVS---RNGNRCDAINIGRD 291 L G C I C ++ G+V++SDG S + DA +G + Sbjct: 251 LQGGCAIPIGVETQCLPLSKDKYSVVLQGMVVSSDGTRSAYASEFMEVSSEKDAEQLGMN 310 Query: 292 AAQYIRFISNKNVFN 306 A + + Sbjct: 311 VATALLKRGAGAILE 325 >gi|223939088|ref|ZP_03630972.1| porphobilinogen deaminase [bacterium Ellin514] gi|223892248|gb|EEF58725.1| porphobilinogen deaminase [bacterium Ellin514] Length = 332 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 105/332 (31%), Positives = 160/332 (48%), Gaps = 40/332 (12%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG- 60 KP I TR S LALA A S P +I + + T GD++ +L + G Sbjct: 5 NNKPIFIATRGSALALAQANAVLSQCRSA--FPKLDIELKIIKTTGDKLQKASLAKEGES 62 Query: 61 --KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS- 117 KGLFT+E+E L++G+ D AVHS KD+PT+L GL + A R D+RDV + A+ Sbjct: 63 LPKGLFTKELEVALLNGDADIAVHSLKDLPTELPTGLILGAVSKRADVRDVLVYRDAEYL 122 Query: 118 -----------------LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK 160 +KD + + TSS RRKA LL R D++V++ RG + TRL K Sbjct: 123 RSQPGKSNRRGFTPKLAIKDFPPGATVATSSTRRKAQLLAQRGDLNVVEIRGNVATRLEK 182 Query: 161 L-NNNKAHAILLAYAGIKRLKK--------------EKVIKEILNIEDFPPSPGQGAICI 205 L N + A +LA AG++RL E ++ IL+ + P GQ A+ + Sbjct: 183 LANQPELDATVLAAAGLERLNFKITAEGKLAGEGIPEGLLATILDFDVMLPCVGQAALGM 242 Query: 206 ETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIV 265 E N+ + QE+ +NH +T V ER+FL+ + G C+S +A +A G L Sbjct: 243 EIRENDARIQEICDRLNHPETHACVLAERSFLSGMGGGCQSPVAAYAEIAGDQLQMRAAS 302 Query: 266 LASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + +A+ +G++ A ++ Sbjct: 303 FRE--TSARRAVGGKSINEAVALGQELAAKLK 332 >gi|297180020|gb|ADI16245.1| porphobilinogen deaminase [uncultured bacterium HF0010_16H03] Length = 301 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 91/301 (30%), Positives = 147/301 (48%), Gaps = 3/301 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI TR SPLAL A + + + + + +IP+S++GD T++ L ++GGKGLF Sbjct: 2 KIRIATRKSPLALFQAEYVANQIKQLDQ--KIKVELIPMSSEGDL-TDKPLHQVGGKGLF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + +E L++ D AVHS KD+P L K +I + R D+ ++ S K + Sbjct: 59 IKTLESALLNDSADIAVHSLKDVPANLEKNFKIISVCKRAAASDILLTKKGTSFKSMPEG 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S+IGTSS RRKA + R D+S I RG I TR+NKL+ N +++A A ++RL Sbjct: 119 SIIGTSSPRRKAQIKILRPDLSTISVRGNIATRINKLHKNHFDGLIIAKAAMERLNLPFK 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + ++ P+ QG I IE +N +++ IN E ER+F+A+L+GSC Sbjct: 179 NTYEFSYQEMLPAATQGFIGIECIASNKDLIKMLGSINSEKDMILAEAERSFVAQLNGSC 238 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 S IA + + + + L+ +G + + A+ + Sbjct: 239 LSPIAIYCREESNQILISAKALSQNGDKQIFKEIISSHASINEDIKSLAKEFISKGADKL 298 Query: 305 F 305 Sbjct: 299 I 299 >gi|304393221|ref|ZP_07375149.1| porphobilinogen deaminase [Ahrensia sp. R2A130] gi|303294228|gb|EFL88600.1| porphobilinogen deaminase [Ahrensia sp. R2A130] Length = 324 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 85/317 (26%), Positives = 134/317 (42%), Gaps = 20/317 (6%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-LFTE 66 I TR S +ALA A L + +P ++ + + +GDR L GGKG F Sbjct: 6 IATRKSKMALAQANHVADLLREA--VPGLDVDLAENNPRGDRDQISKLDRHGGKGGAFVA 63 Query: 67 EIEKKLISGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISH----TAQSLKDL 121 EI +++G A+HS KDMP + GL I AYL R+D D + Q + Sbjct: 64 EIRADIVAGRSQVAMHSLKDMPGNEETPGLVIGAYLTRDDPTDSLVLRDGITMDQMRETQ 123 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA------------HAI 169 +GT+S+RR A L + +I FRG ++R+ KL+ I Sbjct: 124 GDGLKLGTNSVRRAAFLRNLFPNAEIIHFRGAADSRIEKLDKGLMQQLVDGGEVGPADGI 183 Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 LLA +G+ R+ I + P+ GQG + +E ++ + +E + I+ + Sbjct: 184 LLATSGMARVGVSDRISHTFTTSEMLPAVGQGIVAVECGSSDWQTREWLARIDDANARAC 243 Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 ER L LDG C S IA + +G T+ V+ DG + +G +G Sbjct: 244 AEAEREVLWVLDGHCNSPIAAHSVIEGDTMTMESAVMEIDGDKIIRHTASGPAEYPRELG 303 Query: 290 RDAAQYIRFISNKNVFN 306 R + + + Sbjct: 304 RTVGLALVAKGAQAIIE 320 >gi|322389389|ref|ZP_08062943.1| hydroxymethylbilane synthase [Streptococcus parasanguinis ATCC 903] gi|321143877|gb|EFX39301.1| hydroxymethylbilane synthase [Streptococcus parasanguinis ATCC 903] Length = 307 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 84/304 (27%), Positives = 151/304 (49%), Gaps = 10/304 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + ++GTR S LA+ L + H P + ++P T+GDR+ + +L IGGKG Sbjct: 1 MRSIKVGTRKSQLAMTQTKMVVERLKECH--PEVDFELVPYKTQGDRLVHVSLQTIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL- 121 +F +EIE+ L++ +ID A+HS KD+P+ L+ G I A RED+RD I Sbjct: 59 VFVKEIEQALLNKDIDIAIHSLKDVPSILVDGCTIGAIPEREDVRDCLIFREEGMTLATL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSS+RR+ L R+D+ RG I++R+ KL + AI+LA AG+KR+ Sbjct: 119 PQGAVVGTSSIRRQVQLQSLRNDLQFKPLRGNIDSRIRKLQEGECDAIVLAAAGLKRIGY 178 Query: 182 EKVIK----EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 E L+ + F P+ QGA+ +E ++ + E++ I+ ++ + + ER+FL Sbjct: 179 LDQSPSLNLEFLDPQTFIPAVSQGALAVECREDDEEVLEILASIHDKEVENCIQLERSFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + ++ C + A + ++ + + + + + D + + + Sbjct: 239 SLMNADCTFPVGAHAQYIDGHYHLETMLADAKDRCLYVALTSKDGSDLPKLAL---EQLM 295 Query: 298 FISN 301 Sbjct: 296 EKGA 299 >gi|145592441|ref|YP_001154443.1| porphobilinogen deaminase [Pyrobaculum arsenaticum DSM 13514] gi|158514284|sp|A4WN24|HEM3_PYRAR RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|145284209|gb|ABP51791.1| hydroxymethylbilane synthase [Pyrobaculum arsenaticum DSM 13514] Length = 297 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 90/295 (30%), Positives = 142/295 (48%), Gaps = 8/295 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 + TR S L++ E + + V P I + T GD + ++ L +IG KG+F Sbjct: 3 LVVATRGSKLSMLQTEELLAQIKAVE--PSIEFEIKIVKTTGDEVQDKPLYQIGVKGIFE 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+ ++ GE D AVHS KD+P++L GL ++ + R D +S L+ L + Sbjct: 61 KEVNLAVLRGEADVAVHSLKDLPSELSPGLVLAGFSKRAPPFDAVVSTAGYVLETLPRGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 ++GTSS+RR + R D+ V RG ++TR+NK+ K A ++A AGI RL Sbjct: 121 LVGTSSVRRAEFVKAIRPDVRVEPLRGNVDTRINKILQGKYDAAIMAVAGIYRLYGASPP 180 Query: 186 KE--ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + +L E PP PGQG + + +L+K + ER FL + Sbjct: 181 IKLAVLRPEVLPPPPGQGIVAAVVREADSWLIDLLKKASDPKASLEAIAEREFLKAVGAG 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C AI G A+ + T+ F + G + V G+ D + +GR AA+ IR Sbjct: 241 CHVAIGGVAFARNDTVEFIAGYAS--GGRKYIVRVVGD--DPVEVGRRAAEEIRK 291 >gi|302523839|ref|ZP_07276181.1| porphobilinogen deaminase [Streptomyces sp. AA4] gi|302432734|gb|EFL04550.1| porphobilinogen deaminase [Streptomyces sp. AA4] Length = 315 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 91/309 (29%), Positives = 146/309 (47%), Gaps = 22/309 (7%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RIGTR S LALA ++ + I+ ++T GD ++ +++IG Sbjct: 1 MT-RVIRIGTRGSKLALAQTGIVADTIRAT----GAEVEIVTVTTPGDL-SSAPISQIG- 53 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT + + L+ EID AVHS KD+PT GL ++A PRED RD I+ +L + Sbjct: 54 VGVFTSALREALLRNEIDVAVHSYKDLPTAPEAGLVLAAVPPREDPRDALIARDGLTLGE 113 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT + RR A L + ++ RG I+TR+ K+ + + A++LA AG+ R+ Sbjct: 114 LPPGAKVGTGAARRMAQLRALGLGLEIVPIRGNIDTRMRKVTDGELDAVVLARAGLARVG 173 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETH-VNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I E L+ P+P QGA+ +E + L ++ E T +V ERA LA Sbjct: 174 RVDEITETLDPIQMLPAPAQGALALECRAADVDIEHLLASAVDDETTRVAVTAERALLAA 233 Query: 240 LDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKI----FHEVSRNGNRCDAI 286 L+ C + + A + G A +G+ S +A Sbjct: 234 LEAGCSAPVGALAEIVEDLDDEGAVVERISLRGT-AAVEGENGGVDMVRASAIAGIGEAE 292 Query: 287 NIGRDAAQY 295 +GR+ A Sbjct: 293 KLGRELAAE 301 >gi|297563292|ref|YP_003682266.1| porphobilinogen deaminase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847740|gb|ADH69760.1| porphobilinogen deaminase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 335 Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 93/307 (30%), Positives = 149/307 (48%), Gaps = 13/307 (4%) Query: 7 RIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTE 66 R+GTR S +A + + ++ I + +++ GD +T LT++GG G+F Sbjct: 22 RLGTRRSTMATSQSRMVADAITART---GRVIELELITSFGD-VTKAHLTQLGGTGVFVN 77 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 + +L +G +D AVHS KD+PT +GL ++A R+D RD + DL + Sbjct: 78 ALRDELHAGTVDFAVHSLKDLPTTPAEGLVLAAIPERDDPRDALCARDGLKFADLPAGAR 137 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 IGT S RR A L R D+ + RG ETRL K+ + + A++LAYAG+ R+ + + + Sbjct: 138 IGTGSPRRVAQLAALRPDLVYVPIRGNAETRLGKVASGELDAVVLAYAGLGRVGRTEDVT 197 Query: 187 EILNIEDFPPSPGQGAICIETHVNN-PKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+ E P+PGQGA+ +E V + ++H T V ER L+EL+ C Sbjct: 198 EVFEPEQMLPAPGQGALAVECSVERLDGDLAYLASVDHPATRAEVVAERTVLSELEAGCA 257 Query: 246 SAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRN------GNRCDAINIGRDAAQYIR 297 + + +A T L V+A+DG R G+ A +GRD A+ + Sbjct: 258 APVGAYAQYDAETGRLRLRAAVVATDGAEAVRRERAADLASPGDLAAATALGRDLARQMI 317 Query: 298 FISNKNV 304 + Sbjct: 318 AEGADRI 324 >gi|313637685|gb|EFS03063.1| porphobilinogen deaminase [Listeria seeligeri FSL S4-171] Length = 274 Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 105/270 (38%), Positives = 151/270 (55%), Gaps = 5/270 (1%) Query: 39 VIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQIS 98 I + TKGDRI + TL+++GGKGLF E+E+ L G ID AVHS KD+P+ + +GL I Sbjct: 1 EIKEIVTKGDRILDVTLSKVGGKGLFVSEVEQALSDGAIDFAVHSMKDVPSSIKEGLTIG 60 Query: 99 AYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRL 158 A RE D F+ +T +S DL +VIGTSSLRR A +LR R D + RG I+TRL Sbjct: 61 AIPKRESALDCFVFNTVESFHDLPTAAVIGTSSLRRAAQILRQRPDFVIKPIRGNIDTRL 120 Query: 159 NKLNNNKAHAILLAYAGIKRLKK---EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215 KL++ AI+LA AG+ R+ + E ++ E P+ GQGA+ IE N+ + Sbjct: 121 QKLHDENFDAIILAKAGLSRMGWLENTTLKLEDISPELCLPAVGQGALAIECRENDKQIC 180 Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275 +++ I+HE+T V ER FL +L+G C+ IAGFA + F G+V +DG Sbjct: 181 DMLASIHHEETGICVEAERVFLKKLNGGCEIPIAGFATKTAGQIKFKGLVGNADGSTILS 240 Query: 276 VSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 G + + IG A+ + + Sbjct: 241 AENIG--ENPMTIGNQVAEALLSEGADTII 268 >gi|312888384|ref|ZP_07747960.1| porphobilinogen deaminase [Mucilaginibacter paludis DSM 18603] gi|311299218|gb|EFQ76311.1| porphobilinogen deaminase [Mucilaginibacter paludis DSM 18603] Length = 526 Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 85/263 (32%), Positives = 137/263 (52%), Gaps = 10/263 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + IGTR S LAL A ++ L + + + T+GDRI N + ++ G Sbjct: 1 MFDRKLIIGTRGSELALWQANFVKNKLAEN----GIQADLKIIKTQGDRILNLSFDKLEG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI----SHTAQ 116 KG FT+E+E++L++G ID AVHS KD+PT+ GL I+A RED ++ + Sbjct: 57 KGFFTKELEEELLAGTIDLAVHSHKDLPTENPPGLTIAAVSEREDPAELLLVLKDCVDVH 116 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 + ++GTSS RRKA LL R D+ + + RG + TR+NKL N AI++A AG+ Sbjct: 117 QKLSVKYGGIVGTSSNRRKAQLLAVRPDLEIDELRGNVPTRINKLRNEDYDAIMIAKAGV 176 Query: 177 KRLKKEK--VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 RL + E + + P+P QG + I+ + + E ++++NH D + + ER Sbjct: 177 VRLGLDMSEFHVEEIPPTELIPAPAQGVLAIQVREADTELFEALQILNHPDVAEELAVER 236 Query: 235 AFLAELDGSCKSAIAGFAYCKGS 257 + L G C + + + + Sbjct: 237 SLLKLFGGGCHLPLGCYCRKRDN 259 >gi|86751126|ref|YP_487622.1| porphobilinogen deaminase [Rhodopseudomonas palustris HaA2] gi|86574154|gb|ABD08711.1| hydroxymethylbilane synthase [Rhodopseudomonas palustris HaA2] Length = 326 Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 87/320 (27%), Positives = 137/320 (42%), Gaps = 20/320 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-L 63 P RIGTR S +ALA + + L + I+ T GD L GGKG Sbjct: 4 PVRIGTRKSVMALAQTEDIANQLRAAAS--ELDPEIVRFETVGDSDQVSKLLPHGGKGGA 61 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI-RDVFISHTAQSLKD-- 120 F EI ++ GE+ CA+HS KDMP I A D D + +L + Sbjct: 62 FVAEIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPANDSMVLRKGLTLDELK 121 Query: 121 --LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------------NKA 166 IGT+++RR A R ++ VI FRG +TR+ KL+N A Sbjct: 122 ASRGKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADTRIRKLDNREKQRMPDGGEVGPA 181 Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226 A+++A +G++R+ I ++ P+ GQG + +E V+ + ++ + +I+ Sbjct: 182 DALIMARSGLERVGFVDRIVHDFTPQEMLPAAGQGIVAVECPVHEWQTRKYLALIDDPKA 241 Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286 + ER L L+G C S +A ++ GS + VL G +F E +R G Sbjct: 242 RLFCDAEREVLWVLNGHCNSPMAAYSTINGSEMTLSASVLDEAGGLFIEATRTGPANRPR 301 Query: 287 NIGRDAAQYIRFISNKNVFN 306 +GR + + Sbjct: 302 ELGRTVGLDLLDKGAAAIIE 321 >gi|332519549|ref|ZP_08396016.1| porphobilinogen deaminase [Lacinutrix algicola 5H-3-7-4] gi|332045397|gb|EGI81590.1| porphobilinogen deaminase [Lacinutrix algicola 5H-3-7-4] Length = 527 Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats. Identities = 100/306 (32%), Positives = 156/306 (50%), Gaps = 7/306 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RIGTR S LAL A +S L + H V++P+ + GD + ++ L E+G Sbjct: 1 MS-KTIRIGTRDSELALYQANAVKSQLEHL----GHKTVLVPVKSTGDIVLDKPLYELGI 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FT ++ +++G+ID AVHS KD+PT L KG+ +A L R ++RD + T + Sbjct: 56 TGIFTRTLDIAMLNGDIDIAVHSLKDVPTLLPKGIVQAAVLKRGNVRDTLVYKTTEEFL- 114 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 A +VI TSSLRRKA L ++ D RG + TRL KL N + +A + Sbjct: 115 GAREAVIATSSLRRKAQWLNRYPTHTIEDIRGNVNTRLEKLK-NTSRFNAAIFAAAGIGR 173 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + +N+E P+P QGAI + + + + ++ INHE+T ER FL +L Sbjct: 174 LGLRPETAVNLEWMIPAPAQGAIMVTALEEDEETRAILAEINHEETQICTQIEREFLNKL 233 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 +G C + I Y K + F G++L+ +G V R + +I A Y+ Sbjct: 234 EGGCTAPIGALCYIKDEEVNFEGVLLSPNGTKKITVQRVKKLGEHTDIATWCADYVIDKG 293 Query: 301 NKNVFN 306 K++ + Sbjct: 294 GKHLMD 299 >gi|218509456|ref|ZP_03507334.1| porphobilinogen deaminase [Rhizobium etli Brasil 5] Length = 279 Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats. Identities = 131/224 (58%), Positives = 163/224 (72%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A E R LM H +P I+ LSTKGDRIT+R+L EIGG Sbjct: 54 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEEMFEIVVLSTKGDRITDRSLAEIGG 113 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E+KL+SGE+D AVHSAKDMPT L GL +SAYLPREDIRD I TA L D Sbjct: 114 KGLFTEELEQKLVSGELDFAVHSAKDMPTHLPDGLHLSAYLPREDIRDAVIGRTAPKLID 173 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+SSLRR+AL+ R R DI+VI FRG +ETRL KL + A LLA AG+KRL Sbjct: 174 LPHGATVGSSSLRRQALIRRMRPDINVIIFRGSVETRLRKLEEGQVDATLLALAGLKRLG 233 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224 K +V+ +IL+ + FPP+P QGAICIE+ + + + +L+ +N Sbjct: 234 KVEVLTDILDPDTFPPAPAQGAICIESRIGDTRIDDLLAAVNDA 277 >gi|332531340|ref|ZP_08407248.1| porphobilinogen deaminase [Hylemonella gracilis ATCC 19624] gi|332039204|gb|EGI75622.1| porphobilinogen deaminase [Hylemonella gracilis ATCC 19624] Length = 323 Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats. Identities = 107/315 (33%), Positives = 157/315 (49%), Gaps = 24/315 (7%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M I TR S LAL A + L H + ++ ++T+GD+I +R L+++GG Sbjct: 1 MSMN-LTIATRESRLALWQAEHVQGLLRQQ----GHAVTLLGMTTQGDQILDRALSKVGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L G D AVHS KD+P +L +G ++A L RED RD ++S L D Sbjct: 56 KGLFVKELEVALDEGRADLAVHSLKDVPMELPEGFVLAAVLEREDERDAWVSPHCAGLAD 115 Query: 121 LALHSVIGTSSLR-----RKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 L +++GTSSLR R+AL R D+ + RG ++TRL KL+ + HAI+LA AG Sbjct: 116 LPSGAIVGTSSLRRVVLLREALRALGRDDVRIEPLRGNLDTRLRKLDEGQYHAIVLAAAG 175 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ----ELVKVINHEDTWDSVN 231 +KRL I++I E+ P+ GQGA+ IE + + + H+ TW V Sbjct: 176 LKRLGLAARIRKIFTPEEMLPAAGQGALGIEIKHGATAQTAALEQALSNLAHQPTWLRVA 235 Query: 232 CERAFLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGK-IFHEVSRNGNR-- 282 ERA + GSC +A A KG+TL G+ + Sbjct: 236 AERAVSRAMGGSCSMPLAAHAAFVSSPAPKGATLRLRAAWGDVQGRLPLVQAQDEAAVHG 295 Query: 283 -CDAINIGRDAAQYI 296 DA +G A+ + Sbjct: 296 LDDAEALGLRVARQL 310 >gi|85710451|ref|ZP_01041515.1| porphobilinogen deaminase [Erythrobacter sp. NAP1] gi|85687629|gb|EAQ27634.1| porphobilinogen deaminase [Erythrobacter sp. NAP1] Length = 292 Score = 195 bits (495), Expect = 9e-48, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 149/288 (51%), Gaps = 4/288 (1%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 +A AFETR L H + ++P+ GD++ +R L EIGGK L+T+E++ L G+ Sbjct: 1 MAQAFETRERLCKAHGWAEGEVELVPVVASGDKVLDRPLAEIGGKALWTKELDAWLAEGK 60 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 ID AVHSAKD+ T + +A+LPR D RD + A S+ D+ + +GTS+ RR + Sbjct: 61 IDVAVHSAKDVETIRPDAFRFAAFLPRADRRDALV--GAASIADIPRGATVGTSAPRRAS 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 LL R D V+ FRG + TRL KL +A LA AG++RL + +V L D+ P Sbjct: 119 QLLNLRPDCKVVTFRGNVATRLGKLEAGEADVTFLAAAGLERLGQSEVGA-PLETGDWIP 177 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 + QG I +E ++ +A EL+ I+H T + ERA LA+L G+C S +A Sbjct: 178 AAAQGVIALECRADDDEAGELLAAIDHAATRAELEAERALLAKLGGTCHSPVAVLCSGDA 237 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 L + + DG + + + D + A + + + Sbjct: 238 GELTMRAALFSPDGSERVDGEASFSAGDHAPV-HALAADLLHRATPAI 284 >gi|56552799|ref|YP_163638.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis ZM4] gi|260753474|ref|YP_003226367.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|56544373|gb|AAV90527.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis ZM4] gi|258552837|gb|ACV75783.1| porphobilinogen deaminase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 308 Score = 194 bits (494), Expect = 9e-48, Method: Composition-based stats. Identities = 107/300 (35%), Positives = 154/300 (51%), Gaps = 7/300 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 PFR+G+R SPLAL A S+L H +VI+P+ T GD+ ++ L +IGGK L+ Sbjct: 4 PFRLGSRGSPLALIQARSVASALCAAHSWSEDAVVIVPIRTSGDKNRHQALADIGGKALW 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E++ L +G+ID AVHS KD+ T + I+A LPRED+ D I + + L Sbjct: 64 TKELDIALTTGQIDAAVHSMKDVETFRPSHISIAAMLPREDVHDRLIGIPSLEV--LPYS 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +GT+S RR A + R R DI + RG I+TRL KL N + A LLA AG+ RL + V Sbjct: 122 GCVGTASPRRAAQIRRIRPDIEIKLLRGNIDTRLEKLANKQFDATLLAAAGLIRLGRNDV 181 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + + ++ P+ GQGAI IE + A E V +I+H T +V ER L L+ C Sbjct: 182 GYD-VPLDQMLPAAGQGAIGIEAL-ADSAAWEKVSIIDHYPTHLAVQSERQLLLRLNADC 239 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 S IA FA + + +GK S + + + + S V Sbjct: 240 HSPIAVFAEILEKNIRLRACLYTENGK--FSASIDKEISQPSD-AFEVGSLLLNQSPPEV 296 >gi|72163131|ref|YP_290788.1| porphobilinogen deaminase [Thermobifida fusca YX] gi|123747085|sp|Q47LA7|HEM3_THEFY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|71916863|gb|AAZ56765.1| hydroxymethylbilane synthase [Thermobifida fusca YX] Length = 320 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 89/313 (28%), Positives = 151/313 (48%), Gaps = 13/313 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M P R+GTR S +A + L +P + ++ +++ GD IT LT++GG Sbjct: 1 MSTTPARLGTRRSTMATNQSRRVAEILTARTGVP---VELVLITSFGD-ITRAHLTQLGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + L++GE++ AVHS KD+PT +G+ ++A R+D RD + D Sbjct: 57 TGVFVSALRDALLAGEVEFAVHSLKDLPTAPTEGIVLAAVTERDDPRDALCARDGLKFAD 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT S RR A L R D+ + RG ETRL K+ + + A++LAYAG+ R+ Sbjct: 117 LPPGATVGTGSPRRVAQLAALRPDLRYVPIRGNAETRLGKVASGELDAVVLAYAGLHRVG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHV-NNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + ++ +++ P+PGQGA+ +E + + ++H T +V ER LAE Sbjct: 177 RLDDVTDVFDVDQVLPAPGQGALAVECRTADFTGPLRYLTAVDHLPTRAAVTAERVILAE 236 Query: 240 LDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCD-------AINIGRD 291 L+ C + + +A L V+A+DG + + A +GR Sbjct: 237 LEAGCAAPVGAYAEFVAEDRLRLRAAVVATDGSQAVRAEQTVTVTEFPDAVQAATALGRQ 296 Query: 292 AAQYIRFISNKNV 304 A + + Sbjct: 297 LAHDMIEQGADQI 309 >gi|307244624|ref|ZP_07526728.1| hydroxymethylbilane synthase [Peptostreptococcus stomatis DSM 17678] gi|306492005|gb|EFM64054.1| hydroxymethylbilane synthase [Peptostreptococcus stomatis DSM 17678] Length = 310 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 98/304 (32%), Positives = 142/304 (46%), Gaps = 12/304 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +GTR S LALA S ++D K P I + TKGD+I +++L +IG KGLF Sbjct: 2 KLIVGTRGSALALAQTDSIISLVLD--KFPDLEIEKKIIKTKGDKILDKSLDKIGDKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS------- 117 EIE++L+ G ID AVHS KDMPTK+ GL+++ R+D RDV + + Sbjct: 60 VSEIERELLEGTIDFAVHSLKDMPTKISPGLKLAQTPERQDPRDVLVINPKHQLRPEDIM 119 Query: 118 -LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 + IGT S RR + L R I + RG I TRL KL + AI+LA AGI Sbjct: 120 DWLRSSQGLKIGTGSKRRTSQLKRINESIQPMMIRGNIGTRLEKLVSQDLDAIVLAAAGI 179 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 RL + + + E+ P+ GQGA+ IE N+ + + + + ER F Sbjct: 180 NRLGMDGLNLYHFSYEEMIPACGQGALAIEVRSNDENTDRIFDFLADDQACMEIEAERTF 239 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRDAAQ 294 L ++G C + G+ G+ D + A +G+D A Sbjct: 240 LEVINGGCHVPVGATVKKVGNKWVLMGMYGREDCSSIVYGQLDFEPSLGGAKKVGQDLAS 299 Query: 295 YIRF 298 Y+ Sbjct: 300 YLIK 303 >gi|192290090|ref|YP_001990695.1| porphobilinogen deaminase [Rhodopseudomonas palustris TIE-1] gi|192283839|gb|ACF00220.1| porphobilinogen deaminase [Rhodopseudomonas palustris TIE-1] Length = 326 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 93/323 (28%), Positives = 139/323 (43%), Gaps = 20/323 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K P RIGTR S +ALA + L + II T GD L GGK Sbjct: 1 MKFPVRIGTRKSVMALAQTEDIAKQLSAAAS--ELDPQIIKFETVGDSDQISKLLPHGGK 58 Query: 62 G-LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI-RDVFISHTAQSLK 119 G F EI ++ GE+ CA+HS KDMP I A D D + +L+ Sbjct: 59 GGAFVAEIRAAMLRGELHCAMHSLKDMPANEETPGLIVAATLARDPACDSLVLRKGLTLE 118 Query: 120 D----LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN------------ 163 + IGT+++RR A R ++ VI FRG ++R+ KL+N Sbjct: 119 ELKKSRGKGYTIGTNAVRRAAYAKRLFPEVEVIHFRGAADSRMRKLDNREKQRMPDGSEV 178 Query: 164 NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223 A A+++A AGI+R+ I E+ P+ GQG + +E V+ K ++ + +I++ Sbjct: 179 GPADALIMARAGIERVGFVDRIAHDFTPEEMLPAAGQGIVAVECPVHEWKTRQYLALIDN 238 Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283 + + ER L L+G C S IA + G + VL +G +F E +R G Sbjct: 239 HQSRLCCDAEREVLWVLNGHCNSPIAAHSVITGDEMTLRASVLDLEGGMFIEAARTGPAN 298 Query: 284 DAINIGRDAAQYIRFISNKNVFN 306 +GR + V Sbjct: 299 RPRELGRTVGLELLDKGAAAVIE 321 >gi|261402865|ref|YP_003247089.1| porphobilinogen deaminase [Methanocaldococcus vulcanius M7] gi|261369858|gb|ACX72607.1| porphobilinogen deaminase [Methanocaldococcus vulcanius M7] Length = 295 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 96/300 (32%), Positives = 148/300 (49%), Gaps = 14/300 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LAL A + L ++ + + II T GD+I N+ L+EIG G+FT Sbjct: 2 LRIGTRGSKLALYQANKVAELLKNL----GYEVEIIIKKTTGDKILNKKLSEIGI-GVFT 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ L++ EID AVHS KD+PT + L I A L R+ D+ I + L +L Sbjct: 57 KELDLALMNNEIDIAVHSFKDVPTIWNENLMIGAVLERDSYYDLIIWDKNKDL-ELDKEI 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS+RR++ L ++ RG ++TRL KL + AI+L+ AGI RL + Sbjct: 116 TVGTSSIRRRSFLKAMYPNVKFKLLRGNVDTRLKKLKEGQYDAIVLSEAGIIRLNIDLSD 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ PSP QG I + ++ K +++++ INH+ T+ CER L E G C Sbjct: 176 FNYRRLDIT-PSPAQGVIAVACRRDDNKIKKILERINHKKTFLECLCERTALNEFGGGCS 234 Query: 246 SAIAGFAYCKGST--LYFYGIVLASDGK-IFHEVSRNGNRCD---AINIGRDAAQYIRFI 299 + L V +GK N D AI +G+ + ++ + Sbjct: 235 VPFGALSIYDEDKKILTLKATVF-LNGKLKHASGKINCEIDDLDSAITLGKTIGKRLKDL 293 >gi|291528492|emb|CBK94078.1| porphobilinogen deaminase [Eubacterium rectale M104/1] Length = 338 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 97/309 (31%), Positives = 141/309 (45%), Gaps = 41/309 (13%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LAL L + P + + + T GD + L +IG KG+F +E Sbjct: 5 IGTRGSKLALVQTDYVIDKLKRAY--PDDDFKAVIIKTTGDLEQKKALDKIGSKGIFVKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE +L+SG+I AVHS KDMP + GL + RED RDV + A SL +L +VI Sbjct: 63 IEDELLSGKIHMAVHSMKDMPDEPAAGLTFAKAWKREDPRDVLVLKNAASLDELPHGAVI 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--------------------- 166 GT S RRK LL+ R D+ V+ RG I+TRL KL + + Sbjct: 123 GTGSKRRKYQLLKLRPDLKVVGIRGNIDTRLRKLYDGEIIYEEIADNTVNNNEIANEKQN 182 Query: 167 -------HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219 I+LA AGIKR+ ++ I + + +D P+P QG + +E +N + + Sbjct: 183 KYNEYRLDGIVLAAAGIKRIGRDSEITQYFSEDDMIPAPAQGTLALELRADNAELMAKLD 242 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-----------KGSTLYFYGIVLAS 268 ++ E T ER FL + G+C +A + K + L + + Sbjct: 243 ALSDEKTNLCAGIEREFLKRIGGNCHLPVAAYCDIVSEKDCGNDSDKNNRLKLLAMFGSE 302 Query: 269 DGKIFHEVS 277 DGK Sbjct: 303 DGKKLARTE 311 >gi|291525403|emb|CBK90990.1| porphobilinogen deaminase [Eubacterium rectale DSM 17629] Length = 338 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 98/309 (31%), Positives = 142/309 (45%), Gaps = 41/309 (13%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LAL L + P + + + T GD + L +IG KG+F +E Sbjct: 5 IGTRGSKLALVQTDYVIDKLKRAY--PDDDFKAVIIKTTGDLEQKKALDKIGSKGIFVKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE +L+SG+I AVHS KDMP + GL + RED RDV + A SL +L +VI Sbjct: 63 IEDELLSGKIHMAVHSMKDMPDEPAAGLTFAKAWKREDPRDVLVLKNAASLDELPHGAVI 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--------------------- 166 GT S RRK LL+ R D+ V+ RG I+TRL KL + + Sbjct: 123 GTGSKRRKYQLLKLRPDLKVVGIRGNIDTRLRKLYDGEIIYEEVADNTVNNNEIANEKQN 182 Query: 167 -------HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219 I+LA AGIKR+ ++ I + + +D P+P QG + +E +N K + Sbjct: 183 KYNEYRLDGIVLAAAGIKRIGRDSEITQYFSEDDMIPAPAQGTLALELRADNAKLMAKLD 242 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-----------KGSTLYFYGIVLAS 268 ++ E T ER FL ++ G+C +A + K + L + + Sbjct: 243 ALSDEKTNLCAGIEREFLKQIGGNCHLPVAAYCDIVSEKDRGNDSNKNNRLKLLAMFGSE 302 Query: 269 DGKIFHEVS 277 DGK Sbjct: 303 DGKQLARTE 311 >gi|301102795|ref|XP_002900484.1| porphobilinogen deaminase [Phytophthora infestans T30-4] gi|262101747|gb|EEY59799.1| porphobilinogen deaminase [Phytophthora infestans T30-4] Length = 361 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 99/304 (32%), Positives = 155/304 (50%), Gaps = 12/304 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG-- 60 K+ + +R S LA+A + L + + P V+ T GD++ +R L+++G Sbjct: 13 KRTIFVSSRKSQLAMAQTNTVIAMLEE--RFPDLQFVVGQEDTVGDQVLDRHLSDLGTTT 70 Query: 61 -KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT----- 114 GLFT+ +E+ L++ AVHS KDMPT L GL ++A RE D + H Sbjct: 71 ASGLFTKSLEEALLAKAASFAVHSLKDMPTTLPDGLVLAAITKRESPEDAAVIHPKHKEK 130 Query: 115 -AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLA 172 ++L++L SVIGTSSLRR+ALL + RG I+TRL KL+ ++ AI++A Sbjct: 131 GIKTLQELPEGSVIGTSSLRREALLRSQFPTFEIKTVRGNIQTRLAKLDEHDDYDAIIVA 190 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 G +R + I EIL ++ F GQG+I +E ++ + E++K I E + Sbjct: 191 ACGFRRGELGDRIDEILPMDTFGYGVGQGSIGVECRADDEETIEMLKTITDEKSAQLCKA 250 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292 ER+ L L+G C+ A+ A TL VL+ DGK + +G R +G+ Sbjct: 251 ERSLLYHLEGGCQIAMGVSATLDEDTLTLNATVLSRDGKESVHETISGPRTQCEELGKQL 310 Query: 293 AQYI 296 A+ Sbjct: 311 AERF 314 >gi|221126431|ref|XP_002156062.1| PREDICTED: similar to hydroxymethylbilane synthase, partial [Hydra magnipapillata] Length = 418 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 100/339 (29%), Positives = 156/339 (46%), Gaps = 37/339 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 EK +G+R S LA+ ++L K +I + T GD+I + L +IG K Sbjct: 27 EKTSVVVGSRKSQLAVIQTKSIVAALCQKEK--DVECIIETMDTLGDKILHIALPKIGEK 84 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119 LFT+++E L +D VHS KD+PT L +G+ IS R+D RD I H + K Sbjct: 85 SLFTKDLELALSEKRVDFLVHSLKDLPTTLPQGMAISTIYKRDDPRDCIIFHPKHNGKKL 144 Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-AHAILLAYAGIK 177 DL +S+IGTSSLRR A L R + ++ RG + TRL KL AI+LA AG+ Sbjct: 145 ADLPENSIIGTSSLRRVAQLKRKYNKLTFQSVRGNLNTRLQKLEEESLYDAIVLAKAGVD 204 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + I +IL+ ++ + GQGAI +E ++ ++ + +T + ER F+ Sbjct: 205 RMGWTEKIGQILSEDECLYAIGQGAITVEVRNDDKYTISILAQLTDMETLLACVAERCFM 264 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC-------------- 283 L+G C + IA + G+ GIVL +DG F + + + Sbjct: 265 RTLNGGCSTPIACHSQFSGNNYSLRGIVLNADGSRFLDSTVSTTLQVNILTDQNEPPSYT 324 Query: 284 -----------------DAINIGRDAAQYIRFISNKNVF 305 A G + A ++ + +V Sbjct: 325 VSKSGVVINSLYINEFIKAEKCGEELAYCLKKLGADDVL 363 >gi|302695979|ref|XP_003037668.1| hypothetical protein SCHCODRAFT_255775 [Schizophyllum commune H4-8] gi|300111365|gb|EFJ02766.1| hypothetical protein SCHCODRAFT_255775 [Schizophyllum commune H4-8] Length = 358 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 89/331 (26%), Positives = 147/331 (44%), Gaps = 25/331 (7%) Query: 1 MEK---KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH-NIVIIPLSTKGDRITNRTLT 56 M + F + +R SP+A A + +++L + P +ST GD+ + L Sbjct: 1 MSSPQPRTFVLASRKSPMAQAQTVQVQAALRALDTSPSAPKFETSFMSTAGDKNQVQALY 60 Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH--- 113 +GGK L+T ++E L D VHS KD+PT L +G ++ R++ DV Sbjct: 61 FLGGKELWTGDLEVALKERAADMLVHSLKDVPTVLPEGFVLAGISERDEPVDVMCVKAGM 120 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILL 171 ++ ++L SV+GTSS+RR A+L R + +D RG I TRL KL++ A++ Sbjct: 121 PWRTPEELPEGSVVGTSSVRRIAMLKRRFPHLKFLDVRGNIATRLAKLDDPALPYAALIA 180 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ R+ + I L + + GQGA+ IE ++ +A L K I H + Sbjct: 181 AKAGLVRVNLQHRITCDLAPPTYSYAVGQGALGIEVRADDTEALALCKRITHWPSLWRCR 240 Query: 232 CERAFLAELDGSCKSAIAGF-------------AYCKGSTLYFYGIVLASDGKIFHEVSR 278 ERA L EL+G C + A + L V + DG + Sbjct: 241 AERACLRELEGGCSVPVGVVSAIEIENEGEGEEAVGRAGVLSLTAGVTSVDGTEHVQHEI 300 Query: 279 NG---NRCDAINIGRDAAQYIRFISNKNVFN 306 + +A +G A+ ++ + + Sbjct: 301 REHVRSVEEAEALGVRMAKTLKQNGAQKILE 331 >gi|317026261|ref|XP_001389286.2| porphobilinogen deaminase [Aspergillus niger CBS 513.88] Length = 329 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 98/331 (29%), Positives = 140/331 (42%), Gaps = 41/331 (12%) Query: 1 MEKKP------FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT 54 M + R+GTR S LAL A L H P + +GD + Sbjct: 1 MSQNTTTTVQELRLGTRNSKLALVQAEHVSKELTSAH--PGVQFPWQTVVVRGDADKSSP 58 Query: 55 LTEIGG-----KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109 + G K ++TEE+E KL +GE+D VH KDMPT+L + + A + RED D Sbjct: 59 FLKFAGPSDAAKNIWTEEMETKLCAGELDLLVHCLKDMPTRLPETCTLGAIVYREDPTDA 118 Query: 110 FISH-----TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN- 163 + L L SV+GTSS RRKALL + V + RG + TRL KL++ Sbjct: 119 LVIKEGLRSQYTDLSQLPPGSVVGTSSTRRKALLRYRYPHLKVEECRGNLGTRLKKLDDP 178 Query: 164 -NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 AI+LA AG+ R+ E I + L +FP + GQGA+ IE + + + +V+ I Sbjct: 179 EGPFSAIILATAGMVRINLEDRITKRLPPSEFPYAVGQGALGIEIRKEDAQTKTMVRKIE 238 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG-------STLYFYGIVLASDGKIFHE 275 T ER+ L L G C S +A + + L V Sbjct: 239 DLVTRRICLAERSLLRTLQGGCSSPVAVHCTVEQAPTASSPAQLRLDAEV---------- 288 Query: 276 VSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 G DA +G AQ + + + Sbjct: 289 ----GTDEDAEALGATVAQQLLKNGGQALLE 315 >gi|289193013|ref|YP_003458954.1| porphobilinogen deaminase [Methanocaldococcus sp. FS406-22] gi|288939463|gb|ADC70218.1| porphobilinogen deaminase [Methanocaldococcus sp. FS406-22] Length = 292 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 93/298 (31%), Positives = 142/298 (47%), Gaps = 12/298 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IGTR S LAL A + L ++ +++ I + T GDR+ ++ L++IG G+FT Sbjct: 2 ITIGTRGSKLALYQANKVAELLKNL----GYDVKIKIIKTTGDRVLDKKLSDIGI-GVFT 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ +++ EID AVHS KD+PT + L + A L R+ D+ I + D Sbjct: 57 KELDLAMLNNEIDIAVHSLKDIPTIWNENLMVGAVLERDSYYDLLIWNK-DVDFDENSKI 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSSLRR+A L + RG ++TRL KL N AI+L+ AGI RL Sbjct: 116 VIGTSSLRRRAFLKFLYPNAKFELLRGNVDTRLRKLKENLYDAIVLSEAGIIRLGINLDD 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + P+P QG I + ++ + ++++K INHE T+ CERA L E G C Sbjct: 176 FNYKRLNIL-PAPAQGIIAVACKRDDEEMKDILKEINHEKTYLESLCERAALNEFGGGCS 234 Query: 246 SAIAGFAYCK--GSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIRF 298 A L V+ +D + AI +G+ ++ Sbjct: 235 VPFGALAVYDEKNEILKLDAGVVINDELKSASGEIKCKIDEIDKAIELGKKIGMKLKN 292 >gi|238923292|ref|YP_002936807.1| porphobilinogen deaminase [Eubacterium rectale ATCC 33656] gi|238874966|gb|ACR74673.1| porphobilinogen deaminase [Eubacterium rectale ATCC 33656] Length = 338 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 98/309 (31%), Positives = 142/309 (45%), Gaps = 41/309 (13%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LAL L + P + + + T GD + L +IG KG+F +E Sbjct: 5 IGTRGSKLALVQTDYVIDKLKRAY--PDDDFKAVIIKTTGDLEQKKALDKIGSKGIFVKE 62 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 IE +L+SG+I AVHS KDMP + GL + RED RDV + A SL +L +VI Sbjct: 63 IEDELLSGKIHMAVHSMKDMPDEPAAGLTFAKAWKREDPRDVLVLKNAASLDELPHGAVI 122 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--------------------- 166 GT S RRK LL+ R D+ V+ RG I+TRL KL + + Sbjct: 123 GTGSKRRKYQLLKLRPDLKVVGIRGNIDTRLRKLYDGEIIYEEVADNTVNNNEIANEKKN 182 Query: 167 -------HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219 I+LA AGIKR+ ++ I + + +D P+P QG + +E +N K + Sbjct: 183 KYSEYRLDGIVLAAAGIKRIGRDSEITQYFSEDDMIPAPAQGTLALELRADNAKLMAKLD 242 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-----------KGSTLYFYGIVLAS 268 ++ E T ER FL ++ G+C +A + K + L + + Sbjct: 243 ALSDEKTNLCAGIEREFLKQIGGNCHLPVAAYCDIVSEKDRGNDSNKNNRLKLLAMFGSE 302 Query: 269 DGKIFHEVS 277 DGK Sbjct: 303 DGKQLARTE 311 >gi|296282337|ref|ZP_06860335.1| porphobilinogen deaminase [Citromicrobium bathyomarinum JL354] Length = 292 Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 146/288 (50%), Gaps = 4/288 (1%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 +A A ETR+ L H + ++P+ GD++ +R L ++GGK L+T E++ L G Sbjct: 1 MAQAHETRARLCAAHGWDESAVELVPVVAGGDKVQDRPLADVGGKALWTRELDAWLDEGR 60 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 ID AVHS KD+ T + + ++A LPR D RDV + A SL+ + + +GTS+ RR A Sbjct: 61 IDAAVHSLKDVETIRPEWITLAAILPRADRRDVLL--GASSLRSIPQGATLGTSAPRRAA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 + R DI + FRG + TR+ KL +A LLA AG++RL +E V L +E + P Sbjct: 119 QMKNLRPDIETVLFRGNVATRMAKLQAGEADVTLLAAAGLERLGQESVGT-PLPLETWLP 177 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 +P QGAI IE + + + +N T V ERA L L GSC S + Sbjct: 178 APSQGAIGIECRTEDSVTRGHLDALNDAPTRREVEAERALLEALGGSCHSPVGVLVENAD 237 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 L+ + ++DG + S + D I R A + + + Sbjct: 238 EGLHMRAALFSADGAERVDGSSDLTPGDDEAI-RAFAADLLARATPGI 284 >gi|257054363|ref|YP_003132195.1| porphobilinogen deaminase [Saccharomonospora viridis DSM 43017] gi|256584235|gb|ACU95368.1| hydroxymethylbilane synthase [Saccharomonospora viridis DSM 43017] Length = 316 Score = 193 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 94/316 (29%), Positives = 153/316 (48%), Gaps = 19/316 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + RIGTR S LA++ L + + ++P+ST GDR ++ + EIG Sbjct: 5 SSRTLRIGTRASNLAMSQTRTIAKMLEEA----GQKVELVPVSTPGDR-SSAPIAEIG-V 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT + + L++ E+D AVHS KD+PT G+ ++A RED RDV IS +L +L Sbjct: 59 GVFTSALREALLANEVDVAVHSYKDLPTAPQPGIVLAAVSKREDPRDVLISRDGLTLGEL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 + +GT S RR L + ++ RG I+TR+ K+ + + AI+LA AG+ R+ K Sbjct: 119 PPGAKVGTGSPRRMTQLRALGLGLEIVPIRGNIDTRIAKVTSGELDAIVLAKAGLTRVGK 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETH-VNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +I E+++ P+P QGA+ +ET + L +++HE T +V ERA LA L Sbjct: 179 LDLITEVIDPMQILPAPAQGALAVETRVDDVDTEHLLRSIVDHEATRVAVAAERAVLATL 238 Query: 241 DGSCKSAIAGFAYCKGS---------TLYFYGIVLAS---DGKIFHEVSRNGNRCDAINI 288 C + + A L G+ + D S ++ +A + Sbjct: 239 QAGCSAPVGALAEVVEDLDSEGAVVERLSLRGVAATATEGDSVQILRASGVADKHEADRL 298 Query: 289 GRDAAQYIRFISNKNV 304 GR A + + + Sbjct: 299 GRTVASELLDLGAGAL 314 >gi|325960061|ref|YP_004291527.1| porphobilinogen deaminase [Methanobacterium sp. AL-21] gi|325331493|gb|ADZ10555.1| Porphobilinogen deaminase [Methanobacterium sp. AL-21] Length = 290 Score = 193 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 92/294 (31%), Positives = 149/294 (50%), Gaps = 6/294 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++GTR S LA + L V I + + + GD+I N L I KG+FT Sbjct: 1 MKVGTRGSSLATYQTKTIINELSIVT---DEKIDVEIIKSTGDKIQNSQLYNIDAKGIFT 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E++ ++ G +D AVHS KD+PT+L L+I A RE +V +S +L + Sbjct: 58 RELDDAVLDGTVDFAVHSLKDLPTELEGDLEIVAVPERESPNEVLVSKLG--WDELPKGA 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS+RR+A + ++ RG I+TR+ K+ + + A ++A AG+ RL + I Sbjct: 116 TVGTSSIRREAFCNHHDKEFNIKPIRGNIDTRIKKVFSGEYDATIMAEAGLNRLGLTEYI 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 K+ +IE F P+ GQGAI + ++ +L + INH ++ V E+ L E+ C+ Sbjct: 176 KQRFSIEYFTPAAGQGAIAVVARSDSDVKDDL-QKINHLKSFQEVTAEKRVLLEMGVGCQ 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S + A + L ++L +GKI V G+ A N+G AA+ + Sbjct: 235 SPLGVSARINENKLKLCAVLLTQEGKIVSRVMVEGSADKASNLGLKAAKLMMED 288 >gi|326428753|gb|EGD74323.1| uroporphyrinogen decarboxylase [Salpingoeca sp. ATCC 50818] Length = 737 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 94/337 (27%), Positives = 152/337 (45%), Gaps = 36/337 (10%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++ + IGTR S LAL A L+ + P H I + T GD+ L + G G Sbjct: 374 QRVYTIGTRGSVLALWQAHYVLDRLVKKY--PTHRFRIKVVDTAGDKDLTTALDKFGTTG 431 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK--- 119 +FT+ +E+ L+SGE+DC VHS KD+P+ L +++A R D RD + + + + Sbjct: 432 VFTDALERALVSGEVDCVVHSLKDVPSTLHPSTRLAAISERHDPRDCVVFNPRHNGRYSS 491 Query: 120 --DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAG 175 DL SV+GTSS RR+A L R ++ RG ++TRL KL++ N A++LA AG Sbjct: 492 IADLPPGSVLGTSSARRRAFLARAYPSLTFKHVRGNVKTRLRKLDDPANGYDALVLASAG 551 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL------------------ 217 ++RL E + E L+++ P + GQ A+ ++ + Sbjct: 552 LERLNMEARVGEKLSVDVVPHAVGQAALGVQVRCSAKPGPHGGEGGDDDDDDGDKDAAVL 611 Query: 218 ----VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGK 271 + +T + ER FL L G C IA + T + G V + DGK Sbjct: 612 AEMLHASVQCNETALVCSAERGFLRSLGGGCSLPIAVRSQRDADTGRIVLCGNVCSVDGK 671 Query: 272 IFHEVSRNG---NRCDAINIGRDAAQYIRFISNKNVF 305 + + +A +G A ++ + + Sbjct: 672 TLASRTCDAVVTTEAEAAALGEKVAADLKADGGEAIL 708 >gi|300782413|ref|YP_003762704.1| hydroxymethylbilane synthase [Amycolatopsis mediterranei U32] gi|299791927|gb|ADJ42302.1| hydroxymethylbilane synthase [Amycolatopsis mediterranei U32] Length = 309 Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats. Identities = 85/310 (27%), Positives = 140/310 (45%), Gaps = 21/310 (6%) Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 GTR S LAL +L + I+ ++T GD+ + IG G+FT + Sbjct: 2 GTRGSKLALTQTGTVADALRAT----GVEVEIVKVTTPGDKSL-APIATIG-VGVFTSAL 55 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128 + L+ E+D VHS KD+PT G+ ++A PRED RD I+ +L +L S +G Sbjct: 56 REALLRNEVDVIVHSYKDLPTAPEPGITLAAVPPREDPRDALIARDGLTLGELPPGSTVG 115 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188 T + RR A L + ++ RG I+TR+ K+ + + A++LA AG+ R+ + I E Sbjct: 116 TGAARRTAQLRALGLGLEIVPIRGNIDTRMRKVTDGELDAVVLARAGLARVGLVEAITET 175 Query: 189 LNIEDFPPSPGQGAICIETHV-NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 L+ P+P QGA+ +E + L ++ E T +V ERA LA L+ C + Sbjct: 176 LDPIQMLPAPAQGALAVECRSADVDLEHLLRSTLDDEGTRAAVTAERALLAALEAGCSAP 235 Query: 248 IAGFAYCKGS---------TLYFYGIVLASDGKI----FHEVSRNGNRCDAINIGRDAAQ 294 + A + G A +G+ ++ A +G+D A Sbjct: 236 VGALAEIVEDLDAEGKVVERISLRGT-AAIEGEEGAVDMVRAIALADKDQAAQLGKDLAA 294 Query: 295 YIRFISNKNV 304 + + + Sbjct: 295 ELLDLGAGAL 304 >gi|225389494|ref|ZP_03759218.1| hypothetical protein CLOSTASPAR_03242 [Clostridium asparagiforme DSM 15981] gi|225044437|gb|EEG54683.1| hypothetical protein CLOSTASPAR_03242 [Clostridium asparagiforme DSM 15981] Length = 301 Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats. Identities = 100/306 (32%), Positives = 150/306 (49%), Gaps = 19/306 (6%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 RIGTR S LA+ +SL + P + + T GD+I N+ L E GGK Sbjct: 1 MDNTIRIGTRNSRLAMIQTEMVAASLREA--APGIQVSLEARMTTGDKILNKPLQEFGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F E E+ ++ G +D AVHSAKDMP +L +GL I RED RDV ++ + + Sbjct: 59 GVFVSEFEEGILEGRLDLAVHSAKDMPMELAEGLSIVGVPMREDPRDVLVTAAGRPVPKT 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSD------ISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 VIGTSS RRK + ++ + + RG ++TRL KL + H I+LA AG Sbjct: 119 G-EIVIGTSSPRRKLQIELLGTNLWPGGSVRCENLRGNVQTRLGKLESGMYHGIILAAAG 177 Query: 176 IKRLK---KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 +KRL + + L E F P+ GQG + +E +A ++ I+H +TW +N Sbjct: 178 LKRLGLLEDPRYNFQFLECESFVPAGGQGILAVEGRAEG-RAAGILSGISHRETWLCLNL 236 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCDAINIGR 290 ER L LD C I ++ + L V G+ +++ G +A + R Sbjct: 237 ERQVLKLLDAGCHEPIGVYSRLEDGLL----EVFGISGRNGRVYKIHLKGQPEEAGELAR 292 Query: 291 DAAQYI 296 AA+ + Sbjct: 293 RAAEGL 298 >gi|329903547|ref|ZP_08273542.1| Porphobilinogen deaminase [Oxalobacteraceae bacterium IMCC9480] gi|327548285|gb|EGF32978.1| Porphobilinogen deaminase [Oxalobacteraceae bacterium IMCC9480] Length = 280 Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats. Identities = 96/263 (36%), Positives = 145/263 (55%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 ++T+GD+I +RTL+++GGKGLF +E+E + G D AVHS KD+P +L G ++A+L Sbjct: 1 MTTRGDQILDRTLSKVGGKGLFVKELEVAIAEGRADLAVHSLKDVPMELPDGFMLAAFLE 60 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 RED RD F+S+ SL+ L +V+GTSSLRR+AL+ + + RG ++TRL KL+ Sbjct: 61 REDPRDAFVSNEYASLEALPAGAVVGTSSLRRQALIAARFPHLVIRPLRGNLDTRLGKLD 120 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 + AI+LA AG+KRL + I+ L E P+PGQGA+ IE L+ ++ Sbjct: 121 RGEYAAIILAAAGLKRLGVPERIRMALEPEHSLPAPGQGAMAIEIKAGRTDLAALLAPLD 180 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 H T +V ER GSC+ +A FA G L+ +V DG G Sbjct: 181 HLATARAVQAERTLSRAFGGSCQIPLAAFAVVDGDQLHLRAMVATPDGVRVASAEARGPA 240 Query: 283 CDAINIGRDAAQYIRFISNKNVF 305 + +G+ A +R + + Sbjct: 241 DNPEAVGQQVADALRGQDAEIIL 263 >gi|212529280|ref|XP_002144797.1| hydroxymethylbilane synthase, putative [Penicillium marneffei ATCC 18224] gi|210074195|gb|EEA28282.1| hydroxymethylbilane synthase, putative [Penicillium marneffei ATCC 18224] Length = 336 Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats. Identities = 100/320 (31%), Positives = 147/320 (45%), Gaps = 17/320 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+K F+IGTR S LALA +L + P ++ I T GDR ++ K Sbjct: 10 ERKCFKIGTRKSKLALAQTDLVVEALKKKY--PQYDFNIETKDTAGDRDKITAFKDMTSK 67 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 L+TEE+E+ LI G+ID VHS KD+PT L + LPRED RDV I SL Sbjct: 68 NLWTEELEELLIGGQIDFIVHSLKDVPTILPPTCALGGVLPREDPRDVLIVKPGLPYTSL 127 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 +L SV+GTSS+RR A L + V RG IETRL KL+ + I+LA AG+ Sbjct: 128 SELPAGSVVGTSSIRRTAQLAMKFPHLKVQSVRGNIETRLAKLDAEDGPFTCIILAAAGL 187 Query: 177 KRLKKEKVIKEILNIE--DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R I + L+ + + GQGAI IE ++ +++ + + T+ V ER Sbjct: 188 LRTGMGGRITQYLDSKSGSLLYAVGQGAIGIEIRSDDALVLDMLNNVGDQKTFKEVLTER 247 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNRCD---AI 286 + L ++G C + + + L+ I+++ DG A Sbjct: 248 SLLRSIEGGCSAPLGVESEWVEDADGTTKLHVRSIIVSVDGTRHSTAELEKVIESPVAAE 307 Query: 287 NIGRDAAQYIRFISNKNVFN 306 G + AQ + + Sbjct: 308 TFGLELAQELVTNGAGPILE 327 >gi|219852323|ref|YP_002466755.1| porphobilinogen deaminase [Methanosphaerula palustris E1-9c] gi|219546582|gb|ACL17032.1| porphobilinogen deaminase [Methanosphaerula palustris E1-9c] Length = 294 Score = 192 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 91/304 (29%), Positives = 137/304 (45%), Gaps = 22/304 (7%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M R+GTR S LA + S L + ++T GD +T L EIGG Sbjct: 1 MS---IRVGTRGSALARVQTEKVCSMLASR----GIETETVVITTHGDAVTGVPLHEIGG 53 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 +G+F ++ + + EIDCAVHS KD+P G+ A L R D + Sbjct: 54 QGVFVRALDDAIEAQEIDCAVHSLKDVPALRPPGVLTCAVLKRNSPADFLA------VDA 107 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +IG+SS RR+A LLR + V RG ++TR+ KL + I+LA AG++RL Sbjct: 108 VENPQIIGSSSTRRRAQLLRHDPSLEVKQLRGNVDTRIRKLKAGEYDGIVLAEAGLQRLG 167 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 K L +++F PSP QG + + + + L ++HE T V ERA + EL Sbjct: 168 LSLKGK-RLPVDEFVPSPNQGTVAVVCREDPSLIETLACALDHEGTRQDVVFERAVMEEL 226 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-GNRCDAINIGRDA---AQYI 296 G C + + VLA DG + + + + +A IGR A + Sbjct: 227 GGGCFVPEGVYCR--DG--HLIAEVLALDGSRYQRIEADPSDVREAREIGRRLKVQAADL 282 Query: 297 RFIS 300 + Sbjct: 283 ISDA 286 >gi|297618662|ref|YP_003706767.1| porphobilinogen deaminase [Methanococcus voltae A3] gi|297377639|gb|ADI35794.1| porphobilinogen deaminase [Methanococcus voltae A3] Length = 316 Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats. Identities = 94/305 (30%), Positives = 147/305 (48%), Gaps = 14/305 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSL-MDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR S LA+ L ++ + II + T GD+ N+ L ++G G+ Sbjct: 4 TIRIGTRGSKLAMVQTNYVNEILNKEIQTNKDIDTEIIKIKTVGDKDQNKKLVDLG-LGV 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+K ++ E D AVHS KD+PT L I A PRE D+ I + L Sbjct: 63 FTKEIDKSMLLNETDIAVHSLKDVPTLWSDELIIKAVPPRESYNDLLIWKKNRKLNVFQD 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 V+GTSS+RR A L ++ V RG ++TRL KL++ + AI++A AG+ RL Sbjct: 123 DIVVGTSSIRRAAFLEIRYPNLDVKLLRGNVQTRLKKLDDEEYDAIIMAEAGLNRLNINL 182 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + P+P QGAI I T + + E+V++++ + T V ER L E G Sbjct: 183 EDYNYEVLNML-PAPAQGAIGIATRKADEEINEIVELLDDKKTHLEVLAERNALKEYGGG 241 Query: 244 CKSAIAGFAYCKGST--LYFYG-IVLASDGKIFHEVSRNG-------NRCDAINIGRDAA 293 C++ A L +V ++GK VS+ G + A ++G++ Sbjct: 242 CQAPFGALAVYDEEENVLSLTCDLVFEANGKNVL-VSKEGFVYCDIDDFEKAADLGKNLG 300 Query: 294 QYIRF 298 + ++ Sbjct: 301 KLLKS 305 >gi|170096450|ref|XP_001879445.1| predicted protein [Laccaria bicolor S238N-H82] gi|164645813|gb|EDR10060.1| predicted protein [Laccaria bicolor S238N-H82] Length = 340 Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats. Identities = 96/314 (30%), Positives = 146/314 (46%), Gaps = 12/314 (3%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+K IG R S LA A RS L + P I I +TE GG Sbjct: 15 EQKAIVIGCRPSTLAKIQAELVRSRLKVL--FPASRFEISSKKFPQPEIGTSQITERGGA 72 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSL 118 L+T E+E L G+ID VHS KD+PTKL +G +I L RED RD + ++L Sbjct: 73 SLWTTELEDALFDGDIDILVHSLKDVPTKLKEGCEIIHVLEREDRRDCLVVKDGLPYRTL 132 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYAGI 176 ++L SV+GT S+RR A + R + + D RG I+TRL KL++ A++LA AG+ Sbjct: 133 EELPAGSVVGTGSVRRVAQMKRRYPLLVIKDVRGNIDTRLQKLDSPDLPYTALILASAGL 192 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 RL I L+ P+ GQG + E + K + +V + +V ERA Sbjct: 193 LRLSLHDRITSYLSPPISYPAVGQGCLGAEFRSADTKVKAMVSRLEVWQDGWAVRAERAL 252 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGI--VLASDGKIFHEVSRNG---NRCDAINIGRD 291 L L+G C + ++ G + + + + DG V G + + + +G+ Sbjct: 253 LWVLEGGCAFPVGIWSSWSGDNIASESLSVMTSPDGSEEITVETTGVVASVEEVLELGKQ 312 Query: 292 AAQYIRFISNKNVF 305 AA+ + + + Sbjct: 313 AARSLLEKGGRGII 326 >gi|291295115|ref|YP_003506513.1| porphobilinogen deaminase [Meiothermus ruber DSM 1279] gi|290470074|gb|ADD27493.1| porphobilinogen deaminase [Meiothermus ruber DSM 1279] Length = 299 Score = 191 bits (486), Expect = 9e-47, Method: Composition-based stats. Identities = 87/304 (28%), Positives = 142/304 (46%), Gaps = 14/304 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + IG R S LA A L + P I + +++ +E Sbjct: 1 MRVIVIGARASLLAQAQTRWVVERLKE--NWPETEFKIRTI-------QSKSASE----Q 47 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 E + + L E+D AV+S K +PT+ GL++ A R + R+ + +A+ L+DL Sbjct: 48 SAAEALRQALGKREVDIAVYSLKYLPTQEAPGLRLVAVPKRMEPREALVGRSAKRLEDLP 107 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+G +SLRRKA LL R D++V D G ++ RL+ L + A+++ A + RL Sbjct: 108 KGAVVGVNSLRRKAQLLAHRPDLNVCDLEGDVDDRLSALGTGEYDAMIIGAASLLRLDLR 167 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I ++++ E P+PGQGA+ +E + A+EL +NH ++ ERAFL L Sbjct: 168 NRIDQLIDPEVMLPAPGQGALGLEVRQGDDWAEELAYSLNHRASFVRTTAERAFLRALGA 227 Query: 243 SCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 A A A + TL G+V + DG G+ +A +G D AQ + Sbjct: 228 GDGCAAAALATLEGDDTLLLQGVVASPDGHELIRAEIEGDAEEAAELGHDLAQDLLAEGG 287 Query: 302 KNVF 305 + + Sbjct: 288 RELL 291 >gi|148271775|ref|YP_001221336.1| porphobilinogen deaminase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829705|emb|CAN00621.1| hemC [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 328 Score = 191 bits (486), Expect = 9e-47, Method: Composition-based stats. Identities = 90/313 (28%), Positives = 150/313 (47%), Gaps = 17/313 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LALA + + + ++P++T GD +L+ +GG G+F Sbjct: 13 TLRIGTRGSALALAQTRAIAAEI---TGASGLEVELVPVTTHGDTSR-ESLSSLGGTGVF 68 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L+ GE D VHS KD+PT GL +++ RED RDV + +L L Sbjct: 69 ASALRESLLRGECDLVVHSLKDLPTAPYAGLTVASVPVREDPRDVLCARDGLTLATLPRG 128 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT S RR+A +L R D+ V+D RG I+TRL+++ A++LA AG++R+ + Sbjct: 129 ARVGTGSPRRRAQILAERPDLDVVDIRGNIDTRLSRVTAGDLDAVVLAAAGLERIGRIDA 188 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQ----ELVKVINHEDTWDSVNCERAFLAEL 240 E L ++ +P +PGQGA+ +E + + V+ ++ T +V ER LA L Sbjct: 189 ATEHLELDRWPTAPGQGALALEIRTEDAETHSVVGRAVEAVDDPFTHAAVLAERGVLAAL 248 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRD------- 291 + C + I +A + L +V DG S + D +G Sbjct: 249 EAGCAAPIGAWATVTSARLALTAVVYRPDGTQRMAASHELDTAGLDLAQLGASASALSGP 308 Query: 292 AAQYIRFISNKNV 304 ++ + ++ Sbjct: 309 VSRELLDAGAADL 321 >gi|319946908|ref|ZP_08021142.1| hydroxymethylbilane synthase [Streptococcus australis ATCC 700641] gi|319746956|gb|EFV99215.1| hydroxymethylbilane synthase [Streptococcus australis ATCC 700641] Length = 307 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 87/304 (28%), Positives = 150/304 (49%), Gaps = 10/304 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + ++GTR S LA+ L + H P ++P T+GDR+ + +L IGGKG Sbjct: 1 MRSIKVGTRKSQLAMTQTKMMVDRLKECH--PDVEFELVPYKTQGDRLVHVSLQTIGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL- 121 +F +EIE+ L++ +ID A+HS KD+P+ L+ G I A RED+RD I Sbjct: 59 VFVKEIEQALLNRDIDIAIHSLKDVPSILVDGCTIGAIPEREDVRDCLIYREEGMTLATL 118 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 +V+GTSS+RR+ L R+D+ RG I++R+ KL + AI+LA AG+KR+ Sbjct: 119 PQGAVVGTSSIRRQVQLQSLRNDLQFKPLRGNIDSRIRKLQEGECDAIVLAAAGLKRIGY 178 Query: 182 EKV----IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 E LN +F P+ QGA+ IE ++ + E++ I+ ++ + + ER FL Sbjct: 179 LDQSPSLNIEFLNPHEFIPAVSQGALAIECREDDEEVLEILASIHDKEVENCIQLERCFL 238 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 + ++ C + A + ++ + + + D ++ + A + + Sbjct: 239 SLMNADCTFPVGAHAQYIDGHYHLETMLADAKDRCLY---VALTSKDGSDLPKRALEQLM 295 Query: 298 FISN 301 Sbjct: 296 EKGA 299 >gi|196004682|ref|XP_002112208.1| hypothetical protein TRIADDRAFT_56012 [Trichoplax adhaerens] gi|190586107|gb|EDV26175.1| hypothetical protein TRIADDRAFT_56012 [Trichoplax adhaerens] Length = 314 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 94/335 (28%), Positives = 137/335 (40%), Gaps = 66/335 (19%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 ME+ RIGTR S LA+ +L ++H P I I+ + T GDR+ ++ L EIG Sbjct: 4 MEETVVRIGTRKSQLAMIQTHSVVDALREIH--PKARIEIVTMDTIGDRVLDKALPEIGQ 61 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 LFT+++E L +ID +HS KD+P+ L +GL I+A Sbjct: 62 TNLFTKDLEVALTDNKIDLIIHSLKDVPSTLPEGLAIAAI-------------------- 101 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRL 179 +VIGTSSLRR A L R + + RG + TRL KL+ A++LA AG++ Sbjct: 102 ---GNVIGTSSLRRIAQLKRRFPHLKFENVRGNLNTRLKKLDESGIYDALVLAGAGVELT 158 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 ++ + GQGA+ IE N+ K L+ D+ ERAFL Sbjct: 159 -----------PDECLYAIGQGALGIEIRKNDKKTFSLISAYTDFDSLVCNAAERAFLRF 207 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---------------- 283 LD C I + + L G V + DG + S Sbjct: 208 LDKGCSVPIGVYTEFTENKLKITGAVFSLDGSKRVQYSDECTISGLNAKDDCESNYESLS 267 Query: 284 -------------DAINIGRDAAQYIRFISNKNVF 305 +A +G+ A+ I V Sbjct: 268 SILCPSEMCNSLIEAERLGKYVAEMILKNHGGEVL 302 >gi|118376440|ref|XP_001021402.1| porphobilinogen deaminase family protein [Tetrahymena thermophila] gi|89303169|gb|EAS01157.1| porphobilinogen deaminase family protein [Tetrahymena thermophila SB210] Length = 362 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 99/334 (29%), Positives = 158/334 (47%), Gaps = 30/334 (8%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLM--DVHKIPPHNIVIIPL---------------- 43 + + F+I +R S LAL+ +E L+ + N ++P+ Sbjct: 17 KNRKFKIASRSSQLALSQTYEVIDLLVGVKELGLTKENFEVVPISNAPGKNCTLKFKINI 76 Query: 44 -----STKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQIS 98 + KGD+ L +GG G+FT+ +E +L++ D AVHS KD+PT + + L I Sbjct: 77 TNKQFTNKGDQNLKDPLYVMGGVGVFTKIVEVELLNKNGDIAVHSLKDLPTIIDERLFIG 136 Query: 99 AYLPREDIRDVFISHTA---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIE 155 A P + DV I + + LKDL SVIGTSSLRR L + + RG + Sbjct: 137 AVPPLKPRGDVVIFNEKHKGKELKDLPEGSVIGTSSLRRITNLKNRYPHLKYENIRGNLN 196 Query: 156 TRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215 TRL KL N + AI+LA AG+ RL + + + L EDF +PGQGA+ ++ ++ +A Sbjct: 197 TRLTKLENGQYDAIILAEAGVFRLGWIEKVGQFLKQEDFLYAPGQGALGVQCRADDKEAI 256 Query: 216 ELVKVINHEDTWDSVNCERAFLAELD---GSCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272 L+ IN ++ V+ ER FL +L+ CK IA + TL G V + + Sbjct: 257 ALLSYINQKEPRIRVDAERQFLNKLEGVILGCKLPIAVHSEIIDQTLRLTGQVWSLEADK 316 Query: 273 FHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 G+ D ++G ++ ++ + Sbjct: 317 TIREVIEGHISD-QDLGLKLSEKMKQAGAGEILE 349 >gi|119871570|ref|YP_929577.1| porphobilinogen deaminase [Pyrobaculum islandicum DSM 4184] gi|158512988|sp|A1RQK2|HEM3_PYRIL RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|119672978|gb|ABL87234.1| hydroxymethylbilane synthase [Pyrobaculum islandicum DSM 4184] Length = 301 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 96/295 (32%), Positives = 147/295 (49%), Gaps = 9/295 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+ TR S L+L E + + V P I+ + T GD I ++ L +IG KG+F Sbjct: 2 KIRVATRGSKLSLIQTEELLAQIKAVE--PDVQFEIVVVKTTGDLIQDKPLFQIGVKGIF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ ++ GE D AVHS KD+P++L GL ++ + R DV IS +L+ L Sbjct: 60 EKEVNLAVLRGEADMAVHSLKDLPSELTPGLVLAGFSKRAPPHDVLISRGGYTLETLPKG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSS+RR L R D+ V RG ++TR+ K+ + + A ++A AG++RL Sbjct: 120 AVVGTSSVRRAEFLKAVRPDVEVKPLRGNVDTRVGKVLSGQYDAAVMAAAGLQRLYGSSP 179 Query: 185 IKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I+ + E+ PP PGQG + + +L+K + + ERAFLA + Sbjct: 180 PVSIVPLRVEEVPPPPGQGIVVAVVKEEDSWLIDLLKKASDKTAAIEATAERAFLAGVGA 239 Query: 243 SCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C AI G A +L F A G + V G D + +G+ AAQ I Sbjct: 240 GCHVAIGGVAKLTPQGSLEFTAGYAA--GGAKYVVKVFG--EDPVEVGKRAAQLI 290 >gi|327403451|ref|YP_004344289.1| Porphobilinogen deaminase [Fluviicola taffensis DSM 16823] gi|327318959|gb|AEA43451.1| Porphobilinogen deaminase [Fluviicola taffensis DSM 16823] Length = 304 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 92/260 (35%), Positives = 141/260 (54%), Gaps = 10/260 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + RIG+R S LAL A + L + + I ++TKGD+I + + ++ GKG Sbjct: 1 MRNIRIGSRGSDLALWQANHVKKQLEAL----GAEVGITIITTKGDQIQDLSFDKLEGKG 56 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 FT+EIE+ L+ ID AVHS KD+ T +GL I+A RE+ DV + H KD Sbjct: 57 FFTKEIEQALLDNSIDLAVHSHKDLETNTPEGLIIAAVSERENPADVLLIHPNAFDKDEF 116 Query: 123 L----HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +V+GTSS RRK+ ++ +RSDI + D RG + TRL KL + AILLA AG+ R Sbjct: 117 WSLKKGAVVGTSSARRKSQVIAFRSDIEIKDLRGNVPTRLQKLIDGGYDAILLAKAGLDR 176 Query: 179 LKKEKVIKEIL--NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 L+ + + + E+F P+P QG + ++ N+ + ++ +NHED + ER Sbjct: 177 LQLDLKGMHEVVLDPEEFIPAPAQGVLALQIRENDNELYNFMQAMNHEDIQSQIALERNL 236 Query: 237 LAELDGSCKSAIAGFAYCKG 256 L L G C+ + + +G Sbjct: 237 LNRLQGGCQLPLGAYCPEEG 256 >gi|163814461|ref|ZP_02205850.1| hypothetical protein COPEUT_00612 [Coprococcus eutactus ATCC 27759] gi|158450096|gb|EDP27091.1| hypothetical protein COPEUT_00612 [Coprococcus eutactus ATCC 27759] Length = 350 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 103/315 (32%), Positives = 161/315 (51%), Gaps = 28/315 (8%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +KK ++GTR S LALA +L + + P + ++ +ST+GDR T+R L E GGK Sbjct: 38 QKKTVKVGTRGSKLALAQTELVIKALNE--RFPQIDFQMVTMSTRGDRDTSRALLEFGGK 95 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 +F EE E+ ++ G+ID AVHSAKDMP ++++GL IS LPR +DVFI + D Sbjct: 96 AVFVEEFEEAILKGDIDIAVHSAKDMPMEIMEGLTISGTLPRACPQDVFIYKSG-RSFDR 154 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK- 180 V+GTSSLRR+ + + + RG + TR+ KL + + AI+LA AG++RL Sbjct: 155 NDSFVVGTSSLRRQYQIRDMYPNAVCKNLRGNVGTRIQKLEDGEYDAIILAAAGLERLGV 214 Query: 181 ---------------KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED 225 K+++ L+ E P+ QG I IET + +A ++V+ IN + Sbjct: 215 IEDKGNDSTECFEVHKDELTFRYLSTESMLPAACQGIIAIETRTSG-EAYDMVRAINDTE 273 Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYF---YGIVLASDGKI-----FHEVS 277 + + CERA L+ L+ C I ++ KG + +SD + H + Sbjct: 274 AYTQLTCERAVLSRLNAGCHEPIGVYSELKGKHMKLSLMKVDAASSDKEKDEEIQIHRKT 333 Query: 278 RNGNRCDAINIGRDA 292 GN + + Sbjct: 334 VEGNTSEWEQLVEAL 348 >gi|308177931|ref|YP_003917337.1| hydroxymethylbilane synthase [Arthrobacter arilaitensis Re117] gi|307745394|emb|CBT76366.1| hydroxymethylbilane synthase [Arthrobacter arilaitensis Re117] Length = 324 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 100/323 (30%), Positives = 143/323 (44%), Gaps = 26/323 (8%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + FR+GTR S LA L I ++ + + T+GD +T +L +GG Sbjct: 1 MSE-SFRVGTRGSALATTQTGWAAQKLA---GISGLDVETVLVKTEGDVVTG-SLATLGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + + L+ D AVHS KD+PT +GL ++A RED+RD S + L Sbjct: 56 TGVFAAALRQHLLDAGCDLAVHSLKDLPTAQPEGLVLAAIPAREDVRDALCSRDSLGLDQ 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN---------------NNK 165 L + IGT S RR A LL +RSD ++D RG + TRL ++ Sbjct: 116 LPHGAKIGTGSPRRAAQLLAYRSDFEIVDIRGNVPTRLGRVKGVGKTLDDGSVGRSTQGD 175 Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV---IN 222 A++LA AG++RL E I E L+ P+PGQGA+ +ET Q L + Sbjct: 176 LDAVILAAAGMRRLGLEDHITEYLDPSIMLPAPGQGALALETRSAGSGHQALDAALSQFD 235 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN--- 279 T V ERA L+ L+ C + I A+ G L + DG S Sbjct: 236 DAHTRMQVEAERALLSTLEAGCAAPIGALAHIDGDDLVLEAVACNPDGSETMRRSARIAC 295 Query: 280 GNRCDAINIGRDAAQYIRFISNK 302 A +GR AQ + Sbjct: 296 STTDAAQQLGRSLAQSMIADGAA 318 >gi|297159419|gb|ADI09131.1| porphobilinogen deaminase [Streptomyces bingchenggensis BCW-1] Length = 345 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 92/315 (29%), Positives = 153/315 (48%), Gaps = 19/315 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA+A + + ++ V P + ++ ++T+GD ++ L +IGG G+F Sbjct: 29 PLRLGTRRSALAMAQSGQIADAVRRVTGRP---VELVEITTRGD-VSREDLAQIGGTGVF 84 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L+ GEID AVHS KD+PT L ++A RED RD I+ + +L Sbjct: 85 ATALREALLRGEIDFAVHSLKDLPTAQPDDLVLAALPAREDPRDALIARDGLTFAELPPG 144 Query: 125 SVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + IGT S RR + L W I + RG ++TR+ + + + A++LA AG+ RL Sbjct: 145 ARIGTGSPRRTSQLRAWARSLGLRIETVPIRGNVDTRIGYVRSGELDAVVLAAAGLARLG 204 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + EIL+ + P+PGQGA+ +E N + ++ T +V ER+ LA L Sbjct: 205 RLDEATEILDADHILPAPGQGALAVECAAANAALAAQLAELDDPLTRVAVTAERSLLAAL 264 Query: 241 DGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR-----CDAINI-G 289 + C + + A G + G+V +DG ++S G +A + G Sbjct: 265 EAGCSAPVGALADLLGDGQAVTEMRLRGVVGTTDGSSLVQLSITGPVPTAPGEEAAQLMG 324 Query: 290 RDAAQYIRFISNKNV 304 + A + + Sbjct: 325 HELAAEMLAKGAAGL 339 >gi|189184545|ref|YP_001938330.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Ikeda] gi|238054423|sp|B3CUP9|HEM3_ORITI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|189181316|dbj|BAG41096.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Ikeda] Length = 298 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 107/296 (36%), Positives = 163/296 (55%), Gaps = 5/296 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+G+R S LAL A + + + N +IIP+ T GD I N+ L +IGGKGLF Sbjct: 3 IRVGSRASRLALIQAQAVVQKI---NDLLGLNAIIIPIKTTGDLIQNKNLYDIGGKGLFL 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE L++ ID AVHS KD+P L GLQ++A L R ++ D+ +S A + DL L + Sbjct: 60 KEIEYALLNNTIDIAVHSLKDVPAYLPDGLQLAAVLERGNVGDMLVSKIANKITDLPLGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-V 184 +GTSS+RR+ LLR R D++++ FRG ++TR NK+ NN+ A +LA AG++RL + Sbjct: 120 RVGTSSVRRRIQLLRLRPDLNIVLFRGNVDTRWNKIFNNEVDATVLAAAGLQRLNYDTSR 179 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I++ ++ P+ GQG I IE ++ L INH+ TW + ER +L L+ C Sbjct: 180 FCNIISQDEMLPAIGQGVIAIEARKDDKLIMPLCAKINHQLTWQLIQVERGYLKTLNADC 239 Query: 245 KSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 I G A Y + ++ + + F G +IG +AA+ + Sbjct: 240 NVPIGGLANYIGNNNFEAKFMLGDYNMRYFFYSEVCGKLQHGYDIGVEAAKNFQKK 295 >gi|84490120|ref|YP_448352.1| porphobilinogen deaminase [Methanosphaera stadtmanae DSM 3091] gi|84373439|gb|ABC57709.1| HemC [Methanosphaera stadtmanae DSM 3091] Length = 290 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 91/294 (30%), Positives = 152/294 (51%), Gaps = 6/294 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LA +L ++ + T GD+I N L I KG+FT Sbjct: 1 MIVGTRGSKLATTQTKTVVKALEEITGEEIET---KIIKTTGDKIKNSQLYNIDAKGIFT 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ LI G ID AVHS KD+P++L L I+A RE I +V IS+ S +L ++ Sbjct: 58 KELDTALIDGSIDFAVHSFKDLPSELNDQLTITAIPQREAINEVLISNY--SWDELPENA 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS+RR+A I RG I+TR+ K+ + A ++A AGI RL ++ I Sbjct: 116 TLGTSSVRREAFCKLHGKKIQTKPIRGNIDTRIRKVEEGEYDATIMALAGINRLGLQEHI 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 KE+ + + P GQGA+ + T + + +++ +NHED+ E+A L + C+ Sbjct: 176 KEVFDEQYITPPAGQGALAVMT-HKDSEYNDVISKLNHEDSRIEAMTEKAILETIGVGCQ 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 I + G+ + + +L+ +GK+ +V++ ++ +AIN + +R Sbjct: 235 WPIGIVSKVDGNNINIHCKLLSPEGKLLADVNKTTDKNNAINTAKVIGTKLRED 288 >gi|330946190|ref|XP_003306713.1| hypothetical protein PTT_19919 [Pyrenophora teres f. teres 0-1] gi|311315692|gb|EFQ85212.1| hypothetical protein PTT_19919 [Pyrenophora teres f. teres 0-1] Length = 398 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 106/347 (30%), Positives = 150/347 (43%), Gaps = 47/347 (13%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG---- 60 P IGTR S LA A SL D + P I P+ +GDR L ++ Sbjct: 30 PVNIGTRNSVLAQIQARAVERSLKDAY--PERTYNICPVVVQGDRDKITPLQQLSQGENA 87 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS----HTAQ 116 K L+T E+E L SG++D VH KDMPT+L L++ A L RED RD + Sbjct: 88 KSLWTGELESMLESGDLDIIVHCLKDMPTQLPDHLELGAILEREDPRDALLVSPRLPKET 147 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYA 174 +L L ++IGTSS+RR A L + + D RG + TRL KL+ AI+LA A Sbjct: 148 TLATLPQGAIIGTSSVRRAATLRKLYPHLKFADLRGNVGTRLGKLDAEDSPYSAIILAAA 207 Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 G+KR+ + I + L+ + GQGA+ IE N+ +EL+ I E T + + Sbjct: 208 GLKRMGLDNRITQYLSSTSGGMLHAVGQGALGIEIRKNDDAMKELMSKIRCERTTRACSA 267 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGS------------------------------TLYFY 262 ERA L L+G C I KG L Sbjct: 268 ERALLRTLEGGCSVPIGVETSWKGGKGLAVGPQPAKDYDKHGNAIEEDEPDVDDQELVLR 327 Query: 263 GIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIRFISNKNVFN 306 +V++ DGK E N +A +GR+ A+ + + Sbjct: 328 AMVVSVDGKESVEYEATRKVRNAEEAEEMGREVAKVLIEKGADKILE 374 >gi|195170703|ref|XP_002026151.1| GL16182 [Drosophila persimilis] gi|194111031|gb|EDW33074.1| GL16182 [Drosophila persimilis] Length = 630 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 97/304 (31%), Positives = 144/304 (47%), Gaps = 26/304 (8%) Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPH----NIVIIPLSTKGDRITNRT 54 M +K R+G+R S LAL P I +ST GDR+ N + Sbjct: 1 MSAQEKVIRVGSRKSELALIQTKHVI------GPTPELYLKQRFEIHTMSTFGDRVLNVS 54 Query: 55 LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT 114 L +IG K LFT ++E L +G +D VHS KD+PT L G+ I A L RED RD + Sbjct: 55 LPKIGEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRE 114 Query: 115 AQSLKDL---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAI 169 + SVIGTSSLRR A + R + V D RG + TRL KL+ +++ I Sbjct: 115 NFQGHTIASLPQGSVIGTSSLRRTAQIRRLYPHLIVCDIRGNLNTRLAKLDAADSRFAGI 174 Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 +LA AG+ R+ I ++L D + GQGA+ +E N+ + +++ + +T Sbjct: 175 ILAQAGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDVQVLAMLQKLMCLNTTCR 234 Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGIVLASDGKIFHEVSRNG 280 + ER+FL L G C + +A ++ +G L G V + DG I + Sbjct: 235 ILAERSFLKTLGGGCSAPVAVWSNLQGEPLNANSQDVGLSLTGAVWSLDGAIEIRNHLSC 294 Query: 281 NRCD 284 + Sbjct: 295 ALSE 298 >gi|291542328|emb|CBL15438.1| porphobilinogen deaminase [Ruminococcus bromii L2-63] Length = 286 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 98/295 (33%), Positives = 152/295 (51%), Gaps = 14/295 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IGTR S LALA +L ++ P I + +ST GD+ ++ LT +GGKG+F Sbjct: 2 TIKIGTRKSRLALAQTEMLIKTLK--NRFPNVKIETVYISTTGDKTLDKPLTALGGKGVF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L+SGE D AVHSAKD+PTK+ GL+ISA LPR DVF++ + Sbjct: 60 IKELEMSLLSGETDVAVHSAKDLPTKIADGLEISAVLPRGSYGDVFVTRN---NFETKDG 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL---KK 181 VIGT SLRRK + + D RG ++TRL KL N + A++LA AG++RL Sbjct: 117 FVIGTGSLRRKLFAEKIYPNAKFKDIRGNVDTRLKKLLNGEYDALVLAKAGLERLDLCNG 176 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 E + ++F P+P QG + IE+ N + +++ I+ ++T S ER L L+ Sbjct: 177 EDYTVTPFDADEFLPAPCQGIVAIESR-KNSEVSKMLAEISDKNTMLSFETERQVLHSLN 235 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C + + + + + L++D K + + I + + I Sbjct: 236 ADCSTPVGAISKVENDRITLS---LSADCKKTVSGTDE--ISNRIKLAKRLVSEI 285 >gi|170783140|ref|YP_001711474.1| porphobilinogen deaminase [Clavibacter michiganensis subsp. sepedonicus] gi|169157710|emb|CAQ02912.1| porphobilinogen deaminase [Clavibacter michiganensis subsp. sepedonicus] Length = 328 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 90/313 (28%), Positives = 150/313 (47%), Gaps = 17/313 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LALA + + + ++P++T GD +L+ +GG G+F Sbjct: 13 TLRIGTRGSALALAQTRAIAAEI---TGASGLEVELVPVTTHGDTSR-ESLSSLGGTGVF 68 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L+ GE D VHS KD+PT GL +++ RED RDV + +L L Sbjct: 69 ASALRESLLRGECDLVVHSLKDLPTAPYAGLTVASVPVREDPRDVLCARDGLTLATLPRG 128 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT S RR+A +L R D+ V+D RG I+TRL+++ A++LA AG++R+ + Sbjct: 129 ARVGTGSPRRRAQILAERPDLDVVDIRGNIDTRLSRVTAGDLDAVVLAAAGLERIDRIGA 188 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQ----ELVKVINHEDTWDSVNCERAFLAEL 240 E L ++ +P +PGQGA+ +E + + V+ ++ T +V ER LA L Sbjct: 189 ATEHLELDRWPTAPGQGALALEIRTEDAETHSVVGRAVEAVDDPFTHAAVLAERGVLAAL 248 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC--DAINIGRD------- 291 + C + I +A + L +V DG S + D +G Sbjct: 249 EAGCAAPIGAWATVTSARLALTAVVYRPDGTQRMAASHELDTAGLDLAQLGASASALSGP 308 Query: 292 AAQYIRFISNKNV 304 ++ + ++ Sbjct: 309 VSRELLDAGAADL 321 >gi|148642941|ref|YP_001273454.1| porphobilinogen deaminase [Methanobrevibacter smithii ATCC 35061] gi|222445181|ref|ZP_03607696.1| hypothetical protein METSMIALI_00802 [Methanobrevibacter smithii DSM 2375] gi|261350258|ref|ZP_05975675.1| hydroxymethylbilane synthase [Methanobrevibacter smithii DSM 2374] gi|148551958|gb|ABQ87086.1| porphobilinogen deaminase [Methanobrevibacter smithii ATCC 35061] gi|222434746|gb|EEE41911.1| hypothetical protein METSMIALI_00802 [Methanobrevibacter smithii DSM 2375] gi|288861043|gb|EFC93341.1| hydroxymethylbilane synthase [Methanobrevibacter smithii DSM 2374] Length = 289 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 156/291 (53%), Gaps = 6/291 (2%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 +GTR S LALA + L + NI + + TKGD+ITN L + KGLFT+E Sbjct: 3 VGTRGSQLALAQTNQVCKDLASITN---ENIDVNIIKTKGDKITNSQLYNMDAKGLFTKE 59 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVI 127 ++K L+ EID AVHS KD+PT+L + L+I+A R +V IS+ ++ +L +S + Sbjct: 60 LDKALLEEEIDFAVHSFKDLPTELDEELEIAAVPKRVAPNEVLISN--KNWDELGPNSKL 117 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKE 187 GTSSLRR+A + RG IETR++K+N + A L+A AG+ RL + IK Sbjct: 118 GTSSLRREAFCNYHNKCFELKPIRGNIETRISKVNGSDLDATLMAQAGLIRLNLTQHIKT 177 Query: 188 ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSA 247 + ++ P+ GQGA+ I T ++ K E++ +N + V E+ L EL C+ Sbjct: 178 VFPLDYITPAAGQGALAIITRKDSDKK-EIISKLNDYQSRQEVFAEKQVLEELGVGCQWP 236 Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 I A K Y I+L +G++ E + G+ DA+ G+ + + Sbjct: 237 IGAIAQMKDKQFCIYSILLTKEGEVLKEHTEKGSIRDAVQFGKKIGKVFKD 287 >gi|295094641|emb|CBK83732.1| porphobilinogen deaminase [Coprococcus sp. ART55/1] Length = 350 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 98/315 (31%), Positives = 159/315 (50%), Gaps = 28/315 (8%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 +KK ++GTR S LALA +L + + P + ++ +ST+GDR T+R L E GGK Sbjct: 38 QKKTVKVGTRSSKLALAQTELVIKALNE--RFPQVDFQMVTMSTRGDRDTSRALLEFGGK 95 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 +F EE E+ + G+ID AVHSAKDMP ++++GL IS LPR +D+ I + + D Sbjct: 96 AVFVEEFEEAIFKGDIDIAVHSAKDMPMEIMEGLTISGTLPRACPQDILIYKSG-RIFDR 154 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK- 180 V+GTSSLRR+ + + + RG + TR+ KL + + AI+LA AG++RL Sbjct: 155 NDSFVVGTSSLRRQYQIRDMYRNAECKNLRGNVGTRIQKLEDGEYDAIILAAAGLERLGV 214 Query: 181 ---------------KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED 225 K+++ ++ E P+ QG I IET + + ++V+ IN + Sbjct: 215 IEDKGNDSTECFEVHKDELTFRYISTESMLPAACQGIIAIETRTSG-EVYDMVRAINDTE 273 Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYF---YGIVLASDGKI-----FHEVS 277 + + CERA L+ L+ C I ++ G + +SD + H + Sbjct: 274 AYTQLTCERAVLSRLNAGCHEPIGVYSELHGDHMKLSLMKADAASSDKEKDEEIQIHRKT 333 Query: 278 RNGNRCDAINIGRDA 292 GN + + + Sbjct: 334 VEGNTAEWEQLVENL 348 >gi|302387415|ref|YP_003823237.1| porphobilinogen deaminase [Clostridium saccharolyticum WM1] gi|302198043|gb|ADL05614.1| porphobilinogen deaminase [Clostridium saccharolyticum WM1] Length = 300 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 98/305 (32%), Positives = 147/305 (48%), Gaps = 15/305 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ K RIGTR S LA+A A +L + ++ T+GDRI ++ L E GG Sbjct: 1 MKSKTIRIGTRRSALAVAQANIMAEALERTGT--GLSAELVLKLTEGDRILDKPLLEFGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG+F E E+ L+ GEID AVHSAKD+P +L +GL I A L RED RDV ++ + Sbjct: 59 KGVFVTEFEQALLRGEIDFAVHSAKDLPMELEEGLGIVAVLEREDPRDVLVTPA-SGILS 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDI------SVIDFRGKIETRLNKLNNNKAHAILLAYA 174 +IGTSSLRRK + + + RG + TRL+KL I+LA A Sbjct: 118 GKREIIIGTSSLRRKIQIEEIGKTMWPEALVRCENLRGNVLTRLSKLMEGSYDGIILAAA 177 Query: 175 GIKRLKKE---KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 G+KRL + + + F P+ GQG + +E + + +VK + E+ + Sbjct: 178 GLKRLGLWEDSRYHYHCFDCDTFIPAGGQGILAVE-GRLDSGLEAVVKSLEDEEARLCLT 236 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRD 291 ER L L+ C I ++ K + GI + G+ + G + + Sbjct: 237 MERKILKLLNAGCHEPIGVYSRLKNGEIEILGI--SRRGEEAKRIHLRGGIGELDRLALL 294 Query: 292 AAQYI 296 AA+ + Sbjct: 295 AAESL 299 >gi|302521073|ref|ZP_07273415.1| porphobilinogen deaminase [Streptomyces sp. SPB78] gi|318061890|ref|ZP_07980611.1| porphobilinogen deaminase [Streptomyces sp. SA3_actG] gi|318078097|ref|ZP_07985429.1| porphobilinogen deaminase [Streptomyces sp. SA3_actF] gi|302429968|gb|EFL01784.1| porphobilinogen deaminase [Streptomyces sp. SPB78] Length = 323 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 90/297 (30%), Positives = 146/297 (49%), Gaps = 21/297 (7%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M KP R+GTR S LA+A + ++ + P + ++ ++T GD L IGG Sbjct: 1 MTDKPLRLGTRRSKLAMAQSGLVADAVREATGRP---VELVEITTYGDTSR-EHLARIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + L+ G++D AVHS KD+PT +GL ++A RED RD I+ +L+ Sbjct: 57 TGVFVTALRDALLRGDVDFAVHSLKDLPTAQPEGLALAAVPRREDPRDALIARDGLTLER 116 Query: 121 LALHSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + IGT S RR A L DI + RG ++TR+N + + + A++LA AG+ Sbjct: 117 LPRGARIGTGSPRRMAQLNAHARAHGLDIETVPIRGNVDTRINFVRDGELDAVVLAAAGL 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 RL + + L + P+PGQGA+ +E E + ++ T +V ERA Sbjct: 177 NRLGRGGEVTAYLASDTVLPAPGQGALAVECPPGP--LAEALARLDDPRTRAAVTAERAL 234 Query: 237 LAELDGSCKSAIAGFAYCKG-----------STLYFYGIVLASDGKIFHEVSRNGNR 282 LA L+ C + + A G + + G+V ++DG +++ G+ Sbjct: 235 LATLEAGCSAPVGALADFTGAPQDQAAQRQTTEMRLRGVVGSTDGSELVQLTTTGHV 291 >gi|300770169|ref|ZP_07080048.1| hydroxymethylbilane synthase [Sphingobacterium spiritivorum ATCC 33861] gi|300762645|gb|EFK59462.1| hydroxymethylbilane synthase [Sphingobacterium spiritivorum ATCC 33861] Length = 528 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 88/313 (28%), Positives = 144/313 (46%), Gaps = 26/313 (8%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + IGTR S LA+ A + L + + + T+GD I + L ++ GK Sbjct: 1 MNRKLIIGTRGSQLAMWQANHIKDRLAAA----GIDSELKVIKTQGDIIQHLRLDKLEGK 56 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI----SHTAQS 117 G FT+E+E++L+S ID AVHS KD+PT GL I+A RE ++ I + Sbjct: 57 GFFTKELEEELLSSTIDLAVHSHKDLPTVNPPGLIIAAVSERESPAELLIVLKDCVDIKK 116 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L ++ +GTSS RRKA LL R D+ D RG ++TR+ KL + AI+LA AG++ Sbjct: 117 RLSLKHNATVGTSSNRRKAQLLSLRPDLEFDDLRGNLQTRIQKLRDENYDAIILAKAGVE 176 Query: 178 RLKKE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R+ + + E + + P+P QG + I+ ++ + E ++VI++++ + + ER Sbjct: 177 RIDMDLSEFYVEEIPPVELIPAPAQGVLAIQIRESDQELYEALQVIHNKEVAEVIAVERK 236 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLA-----SDGKIFHEVSRNGNRCDAINIGR 290 L D C + + + + V D S G Sbjct: 237 VLNLFDAGCHAPLGCYCRKSEGKYEAWTSVADTSDEFPDRLYIQRDSTEG---------- 286 Query: 291 DAAQYIRFISNKN 303 A+ I K+ Sbjct: 287 -MAEEIFAKFAKD 298 >gi|149278622|ref|ZP_01884758.1| porphobilinogen deaminase [Pedobacter sp. BAL39] gi|149230617|gb|EDM36000.1| porphobilinogen deaminase [Pedobacter sp. BAL39] Length = 526 Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats. Identities = 90/261 (34%), Positives = 142/261 (54%), Gaps = 10/261 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K IGTR S LAL A + L ++ + + T+GD+I N L ++ GKG Sbjct: 1 MKRLIIGTRGSDLALWQANFIKDRLAEI----GAEAELKIIKTQGDKILNLRLDKLEGKG 56 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI----SHTAQSL 118 FT+E+E++L+ G ID AVHS KD+PT GL I+A RED ++ + + Sbjct: 57 FFTKELEEELLGGTIDIAVHSHKDLPTTHPAGLTIAAVTEREDPSELLLILKDCVDIKQK 116 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L +++GTSS RRKA LL RSD+++ D RG + TR+ KL + AI+LA AG+ R Sbjct: 117 LSLKTGAMVGTSSNRRKAQLLALRSDLNIEDLRGNVPTRIQKLRDENYDAIVLAKAGVNR 176 Query: 179 LKKE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 L + + E+++ + P+P QGA+ ++ N+ + L++ +NH+DT D + ER Sbjct: 177 LNIDLSEFHVEVIDPTEIVPAPAQGALAVQIRENDTELFALLQQLNHQDTIDEIAVERKV 236 Query: 237 LAELDGSCKSAIAGFAYCKGS 257 L +G C + + + Sbjct: 237 LNLFEGGCHMPLGCYCKKEEG 257 >gi|255513653|gb|EET89918.1| porphobilinogen deaminase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 301 Score = 189 bits (479), Expect = 6e-46, Method: Composition-based stats. Identities = 97/310 (31%), Positives = 146/310 (47%), Gaps = 15/310 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLST---KGDRITNRTLTE 57 M + IGTR S LA+A A R+ L + P + I+ + T K DR RT Sbjct: 1 MSESEITIGTRGSELAVAQAEIVRNKLAAIE--PRISFRIVKIKTLNEKVDRSKART--- 55 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 K ++T+EI++ ++ ID AVHS KD+ + + +QI A R+D RDVFI +T Sbjct: 56 --EKDIYTKEIDEAILERRIDIAVHSLKDLKFNMDENMQIGAVPDRDDPRDVFIGNTETE 113 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 + L +++GTSS+RR+ L R + D G I+TRL+KLN+ + I++A AG+K Sbjct: 114 FEHLGTDALVGTSSIRRRVQLTRINPKPMISDLHGNIDTRLSKLNSGEFSGIVIAAAGVK 173 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL K + + D P+ GQGAI + H +N A EL+K I++ V E F Sbjct: 174 RLGKAVR-MQYFDERDVVPAIGQGAIAVTVHKDNSAAAELLKRIDNMKARVEVGEEIEFG 232 Query: 238 AELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C I A + + G V GK + A G+ A+ + Sbjct: 233 KAFGTGCNLPIGANAKMLESGKIGIVGFVSDLAGKTLVKGETETGPGHA---GKSLAELL 289 Query: 297 RFISNKNVFN 306 N+ Sbjct: 290 IKKGAGNLIE 299 >gi|255533333|ref|YP_003093705.1| porphobilinogen deaminase [Pedobacter heparinus DSM 2366] gi|255346317|gb|ACU05643.1| porphobilinogen deaminase [Pedobacter heparinus DSM 2366] Length = 526 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 94/316 (29%), Positives = 149/316 (47%), Gaps = 28/316 (8%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K IGTR S LAL A + L + + + T+GD+I N L ++ GKG Sbjct: 1 MKRLIIGTRGSDLALWQANFIKDKLAAI----GVEAELKIIKTQGDKILNLRLDKLEGKG 56 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL- 121 FT+E+E++L+ G ID AVHS KD+PT GL I+A RED ++ + + Sbjct: 57 FFTKELEEELLGGTIDIAVHSHKDLPTVHPAGLTIAAVTEREDPSELLLILKDCVSINHK 116 Query: 122 ---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 +++GTSS RRKA LL R D+++ D RG + TR+ KL + AILLA AG+ R Sbjct: 117 LSLKKGAMVGTSSNRRKAQLLALRPDLNIEDLRGNVPTRIQKLRDEDYDAILLARAGVNR 176 Query: 179 LKKE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 L + + E+++ + P+P QGA+ I+ N + ++++ INH +T + + ER Sbjct: 177 LNIDLSEFHVEVVDTTELVPAPAQGALAIQIRENENELFDILQQINHSETAEEIAIERKV 236 Query: 237 LAELDGSCKSAIAGFAYCKGSTL---------------YFYGIVLASDG-KIFHEVSRNG 280 L +G C + + + + V DG + Sbjct: 237 LNLFEGGCHMPLGCYCKKEDGQYEVWTSKAETDEDFPDRLFYRVEKLDGLAEKIVAKFSA 296 Query: 281 NRCDAIN--IGRDAAQ 294 +R I R+ + Sbjct: 297 DRKFPAKVFISREVGE 312 >gi|307611613|emb|CBX01297.1| porphobilinogen deaminase HemC [Legionella pneumophila 130b] Length = 284 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 91/277 (32%), Positives = 145/277 (52%), Gaps = 1/277 (0%) Query: 30 VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPT 89 V + P +I ++P+ T GDR L GGKGLF +E+E+ L+ D AVHS KDMP Sbjct: 3 VKQWPNLSIELLPMITSGDRFLKDKLLSAGGKGLFVKELEEALLDKRADLAVHSTKDMPA 62 Query: 90 KLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVID 149 +L GL ++A R++ D IS +SL L +++IGTSSLRR++ LL + ++ + Sbjct: 63 QLPDGLSLAAICKRDNPFDALISPQFKSLDALPKNAIIGTSSLRRQSQLLAYNPNLQIKT 122 Query: 150 FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209 RG I TRL+KL + + AI+LA AG++R+ I +++ + P+ QGA+CIE Sbjct: 123 LRGNIHTRLSKLESGEYQAIILAAAGLERMGLTHHITQLIPDDIMLPTCAQGALCIECRT 182 Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLAS 268 ++ + QEL+ +N + V+ ER A+L G+C A + + L VL Sbjct: 183 DDLEIQELIHSLNDPISALCVHTERRVNAKLGGNCHIPFAVYCTITAENLLLLRAKVLNL 242 Query: 269 DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 DG + + G +A I + + + Sbjct: 243 DGSQMIDDEQQGKIEEAEIIADRCTESLMTKGAMTLL 279 >gi|189200240|ref|XP_001936457.1| porphobilinogen deaminase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187983556|gb|EDU49044.1| porphobilinogen deaminase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 399 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 106/347 (30%), Positives = 149/347 (42%), Gaps = 47/347 (13%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG---- 60 P IGTR S LA A SL D + P I P+ +GDR L ++ Sbjct: 30 PVNIGTRNSVLAQIQARAVERSLKDAY--PERTYNICPVIVQGDRDKITPLQQLSQGENA 87 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS----HTAQ 116 K L+T E+E L SG++D VH KDMPT+L L++ A L RED RD + Sbjct: 88 KSLWTGELESMLESGDLDIIVHCLKDMPTQLPDHLELGAILEREDPRDALLVSPRLPKET 147 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYA 174 +L L + IGTSS+RR A L + + D RG + TRL KL+ AI+LA A Sbjct: 148 TLATLPQGATIGTSSVRRAATLRKLYPHLKFADLRGNVGTRLAKLDAEDSPYSAIILAAA 207 Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 G+KR+ + I + L+ + GQGA+ IE N+ +EL+ I E T + + Sbjct: 208 GLKRMGLDNRITQYLSSTSGGMLHAVGQGALGIEIRKNDEAMKELMSKIRCERTTRACSA 267 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGS------------------------------TLYFY 262 ERA L L+G C I KG L Sbjct: 268 ERALLRTLEGGCSVPIGVETSWKGGKGLSVGPQPAKDYDKHGNAVEEDEPDVDDQELVMR 327 Query: 263 GIVLASDGKIFHEVSRN---GNRCDAINIGRDAAQYIRFISNKNVFN 306 +V++ DGK E N +A +GR+ A+ + + Sbjct: 328 AMVVSVDGKESVEYEATRKVRNAEEAEEMGREVAKILIEKGADKILE 374 >gi|149186168|ref|ZP_01864482.1| porphobilinogen deaminase [Erythrobacter sp. SD-21] gi|148830199|gb|EDL48636.1| porphobilinogen deaminase [Erythrobacter sp. SD-21] Length = 292 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 102/279 (36%), Positives = 148/279 (53%), Gaps = 6/279 (2%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 +A A ETR+ L H + ++P+ GD++ +R L +IGGK L+T E++ L G Sbjct: 1 MAQAHETRARLCAAHSWDEARVELVPVIASGDKVQDRPLADIGGKALWTRELDIWLAEGR 60 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 ID AVHS KD+ T G+ I+A LPRED DV + A SL+ + + +GTS+ RR A Sbjct: 61 IDAAVHSMKDVETIRPDGIAIAAILPREDKADVLL--GATSLEAIPQGAKVGTSAPRRAA 118 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 LL R D+ V+ RG + TR+ KL +A A LA AG+ RL EK + L ED+ P Sbjct: 119 QLLYARPDLEVVGIRGNVATRMAKLQAGEADATFLAAAGLVRLG-EKSVGVRLEPEDWLP 177 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 +P Q AI IE ++ +AQE++ I+H + + V ERA L L G+C S IA +G Sbjct: 178 APAQAAIGIECRASDERAQEVLAAIDHAHSREEVFAERALLEGLGGTCHSPIAALTRREG 237 Query: 257 STLYFYGIVLASDGKIFHEVSRN---GNRCDAINIGRDA 292 L + + DG I G+ + + Sbjct: 238 DALRMTAAIYSPDGAIRIAREARFEPGDLAAPRQLAHEL 276 >gi|126178933|ref|YP_001046898.1| porphobilinogen deaminase [Methanoculleus marisnigri JR1] gi|125861727|gb|ABN56916.1| hydroxymethylbilane synthase [Methanoculleus marisnigri JR1] Length = 294 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 98/304 (32%), Positives = 138/304 (45%), Gaps = 22/304 (7%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR S LALA + L D ++ ++T+GD T L IGG Sbjct: 1 MS---LRIGTRGSALALAQTNKVVGMLADR----GIEAEVVTIATEGDTATGVPLHAIGG 53 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 +G+F ++ ++ GEID AVHS KD+P GL A L R+ D + Sbjct: 54 QGVFVRALDDAILRGEIDAAVHSMKDIPAARPAGLVCCAVLERDSPADFLVHECPLDAV- 112 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 SVIG+SS RR A LLR + V RG ++TRL KL + AI+LA AG++RL Sbjct: 113 ----SVIGSSSTRRCAQLLRDAPALEVKQLRGNVDTRLRKLREGQYDAIVLAEAGLQRLG 168 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + E L + F PSP QG I + ++P ++H T V ERA + E+ Sbjct: 169 LT-LPGEPLPTDRFVPSPNQGTIAVVCR-DDPAVAGAFAALDHAPTRLDVEIERAVMEEV 226 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-NGNRCDAINIGRDA---AQYI 296 G C + + G+ VLA DG + + R +A GR A + Sbjct: 227 GGGCFTPQGIYCR-NGN---LIAEVLALDGSRWERIERHVATVGEAREWGRALRVQAASL 282 Query: 297 RFIS 300 + Sbjct: 283 IREA 286 >gi|307353670|ref|YP_003894721.1| porphobilinogen deaminase [Methanoplanus petrolearius DSM 11571] gi|307156903|gb|ADN36283.1| porphobilinogen deaminase [Methanoplanus petrolearius DSM 11571] Length = 292 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 92/293 (31%), Positives = 144/293 (49%), Gaps = 19/293 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M GTR S LALA L D+ + +ST GD +TN L ++GG Sbjct: 1 MS---LIAGTRASKLALAQTKRVSRMLYDL----EIETQVKKISTSGDNVTNVPLHKVGG 53 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 +G+F + ++ ++ GEID AVHS KD+P K G+ A L R+ D + + Sbjct: 54 QGIFVKALDDAILEGEIDFAVHSMKDIPAKRPDGVVTCAILKRDSPADFLVHYCPLKEVK 113 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 ++GTSS RR+A LR D+ V + RG ++TR+ KL + AI+LA AG++RL Sbjct: 114 -----IVGTSSTRRRAQFLRGGLDVEVKELRGNVDTRIRKLKEGEYDAIVLAEAGMERLG 168 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + L + PSP QG I + ++P+ + + +NHE T + ERA + E+ Sbjct: 169 LDLPGT-RLLPQWHVPSPNQGIIAVVCR-DDPELIKTFEPLNHEQTRMDASVERAVMEEI 226 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG-NRCDAINIGRDA 292 G C + F + + VL+ DGK + + +G + +A IG+ Sbjct: 227 GGGCYTPQGVFC--EDG--FLIAEVLSLDGKRWERIEDDGSSVEEARLIGQKL 275 >gi|187734604|ref|YP_001876716.1| porphobilinogen deaminase [Akkermansia muciniphila ATCC BAA-835] gi|187424656|gb|ACD03935.1| porphobilinogen deaminase [Akkermansia muciniphila ATCC BAA-835] Length = 325 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 91/312 (29%), Positives = 146/312 (46%), Gaps = 23/312 (7%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE---- 57 K IGTR S LALA A R++L + P ++ + T GDR T+ L + Sbjct: 3 SKNTLIIGTRGSALALAQADMVRAALS--LRYPELDVRCEIIHTIGDRRTDVPLADVARV 60 Query: 58 --IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115 + KG+F +E+E L G ID AVHS KD+P++L G ++A LPR + DV I+ Sbjct: 61 SGMVDKGIFIKELETALRDGRIDVAVHSLKDVPSELAAGFTLAAVLPRAAVEDVLITKEP 120 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWR-SDISVIDFRGKIETRLNKL-NNNKAHAILLAY 173 D + T S+RR+ + + S + + RG + TRL KL + A++LA Sbjct: 121 ----DWNGSGTLATGSVRRRLMARTYWGSGLRFENLRGNVPTRLGKLVEHPGWDAVILAR 176 Query: 174 AGIKRLKKEKV---------IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224 AG++RL L +E F P+ GQG + +E ++ + E+++ IN Sbjct: 177 AGLERLGLYAPETLVEGRKLYMRPLPVEVFIPAVGQGIVGMECRSSDRETAEMLEGINDP 236 Query: 225 DTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD 284 +++ ERAFL L +C + + +A+ G L + V G+R Sbjct: 237 ESFACALAERAFLVRLGANCSTPVGVYAHPDGEELVLRAAYYVPGREEPFAVVIRGDRKA 296 Query: 285 AINIGRDAAQYI 296 +G A + + Sbjct: 297 PEALGLRAFEEL 308 >gi|15678894|ref|NP_276011.1| porphobilinogen deaminase [Methanothermobacter thermautotrophicus str. Delta H] gi|11386772|sp|O26960|HEM3_METTH RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|2621967|gb|AAB85372.1| porphobilinogen deaminase [Methanothermobacter thermautotrophicus str. Delta H] Length = 289 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 151/288 (52%), Gaps = 6/288 (2%) Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 GTR S LAL L +V K +I KGDRI + L + +GLFT E+ Sbjct: 4 GTRGSRLALVQTNHVIEMLSEVCKEKIEKKIIKT---KGDRIRDSQLYSMDSRGLFTREL 60 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128 + +++ E+D AVHS KD+P+ L L I+A PRE +V +S +DL S +G Sbjct: 61 DMAVLNEEVDLAVHSLKDVPSDLDPDLAIAAVPPRESPAEVLVSRLD--WEDLPQGSKLG 118 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188 TSSLRR+A + + + RG I+TR+ K+ + + HA ++A AG+KRL E+ IK Sbjct: 119 TSSLRREAFCNHHQKNFKMEPLRGNIDTRIRKVMDGEVHATIMAEAGLKRLGLEEHIKRR 178 Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248 +E F P+ GQGA+ + T + + + I H + V E+ L EL C+ + Sbjct: 179 FPVEYFTPAAGQGALAVITR-ADSELISSIGRITHHPSLQEVTAEKTLLRELGAGCQCPL 237 Query: 249 AGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 G+ L Y ++L +G++ +V+ G +A +IG+ AA+ + Sbjct: 238 GVIGRATGNQLTLYAVLLTREGEMLRKVTVRGPLAEAEDIGKKAAKEM 285 >gi|291546286|emb|CBL19394.1| hydroxymethylbilane synthase [Ruminococcus sp. SR1/5] Length = 257 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 91/259 (35%), Positives = 140/259 (54%), Gaps = 6/259 (2%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 + T GD I +RTL ++GGKGLF +E++K LI G +VHS KDMP ++ + L + A+ Sbjct: 1 MKTTGDIILDRTLDKVGGKGLFVKELDKALIDGRSILSVHSLKDMPMEVPEELPLLAFSK 60 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 RED RDV + S D +G SSLRR L + D+ V RG ++TRL KL+ Sbjct: 61 REDPRDVLVLPEGASELDK--SKPLGCSSLRRTLQLKKLYPDMDVRSIRGNLQTRLRKLD 118 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 + A++LA AG+KRL I ++ P+ GQG + ++ +A + ++ Sbjct: 119 EGQYSALILAAAGLKRLGLGSRINRYFTADEIIPAAGQGILAVQGRKG--EAYDFLEGYC 176 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS-DGKIFHEVSRNGN 281 +D W + + ERAF+ LDG C S +A A G +Y G+ DG + + GN Sbjct: 177 DKDAWTAGSAERAFVKLLDGGCSSPVAAHAEILGDEIYLRGLYYNEKDGS-YVTGTLRGN 235 Query: 282 RCDAINIGRDAAQYIRFIS 300 + DA ++GR+ A+ +R Sbjct: 236 KADAESLGRELAETLRKKG 254 >gi|134045720|ref|YP_001097206.1| porphobilinogen deaminase [Methanococcus maripaludis C5] gi|132663345|gb|ABO34991.1| hydroxymethylbilane synthase [Methanococcus maripaludis C5] Length = 304 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 87/303 (28%), Positives = 132/303 (43%), Gaps = 15/303 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA+ L D+ II + T GD+ N+ L ++G G+F Sbjct: 2 KLRIGTRGSTLAMIQTEYIAGLLNDL----GVETEIIIVKTTGDKDQNKKLADLG-LGVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E++ K++ EID AVHS KD+PT + LQI+A RE D+ I Sbjct: 57 TKELDNKMLENEIDIAVHSLKDVPTLWSEELQITATPKRESPDDIIIWRKDSDFDIEHDE 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IGTSS+RR + L +++ RG + TR+NKL + I++A AG+ R + Sbjct: 117 LNIGTSSIRRTSFLQFTHPNLTPKLLRGNVATRINKLRTGEYDTIIMAKAGLIRQGIDLS 176 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E P+P QG I + + + K E++ I + T+ ER L E G C Sbjct: 177 EFNYKKPEIL-PAPAQGVIGVASRKADTKINEILDKICDKKTYIEAAAERWALKEYGGGC 235 Query: 245 KSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNG-------NRCDAINIGRDAAQY 295 ++ FA + L ++ G I S G + A +G Sbjct: 236 QAPFGAFAIYDTEDGILNLRCELVDEQGTIKRVKSNEGFIICTTDDVELAKELGARVGAL 295 Query: 296 IRF 298 + Sbjct: 296 FKE 298 >gi|239624018|ref|ZP_04667049.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Clostridiales bacterium 1_7_47_FAA] gi|239522049|gb|EEQ61915.1| pyruvate ferredoxin/flavodoxin oxidoreductase [Clostridiales bacterium 1_7_47FAA] Length = 301 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 93/308 (30%), Positives = 138/308 (44%), Gaps = 20/308 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR S LAL L P + ++ T GD+I ++ L E GG Sbjct: 1 MSN-IIRIGTRKSALALIQTHLIADGLKRA--WPDIEVELVTKETLGDKILDKPLQEFGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG+F E E+ + G ID AVHSAKD+P +L +GL I+A R D RDV + T + Sbjct: 58 KGVFVSEFEQAMKEGAIDLAVHSAKDLPMELGEGLVIAAVSGRGDPRDVLV--TMKGSPK 115 Query: 121 LALHSVIGTSSLRRKA-------LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173 H VIGTSS RR+ L + ++ RG + TRL KL I+LA Sbjct: 116 DREHIVIGTSSPRRQLEAVEYRGQLWPGAASLTCATLRGNVHTRLRKLEEGLYDGIILAA 175 Query: 174 AGIKR---LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 AG++R L + L+ F P+ GQG + +E + A L + I+ + + Sbjct: 176 AGLERLDLLGNPSYDFKYLDPTVFIPAGGQGIMAVEAREGSDAA-RLCQAIDSREGRLCL 234 Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA--INI 288 ER L LD C I ++ + +G + D ++ +S G + + Sbjct: 235 TLERMVLKLLDAGCHEPIGIYSNIMDGKMEVWG-ISRPD-RVTRRISLEGAVTEKELEAL 292 Query: 289 GRDAAQYI 296 A + + Sbjct: 293 ALQAGRGL 300 >gi|241766973|ref|ZP_04764769.1| porphobilinogen deaminase [Acidovorax delafieldii 2AN] gi|241362537|gb|EER58429.1| porphobilinogen deaminase [Acidovorax delafieldii 2AN] Length = 244 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 93/240 (38%), Positives = 140/240 (58%), Gaps = 4/240 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P I TR S LAL A ++ L H + ++ ++T+GD+I +R+L+++GGKGLF Sbjct: 8 PLVIATRESRLALWQAEHVQALLRAR----GHTVSLLGMTTQGDQILDRSLSKVGGKGLF 63 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G AVHS KD+P +L +G ++ + RED RD F+S SL+ L Sbjct: 64 VKELEVALEEGRAHIAVHSLKDVPMELPEGFALACVMEREDPRDAFVSPRYASLEALPQG 123 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+ LL R D+ + RG ++TRL KL+ + AI+LA AG+KRL ++ Sbjct: 124 AVVGTSSLRRQVLLQALRPDLRIEPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGLQER 183 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 I+ P+ GQGA+ IE + E + + H++TW +V ERA + GSC Sbjct: 184 IRTEFATTAMLPAAGQGALGIEIRSDRQDLIEALAPLAHQETWLTVTAERAVSRAMGGSC 243 >gi|114568594|ref|YP_755274.1| porphobilinogen deaminase [Maricaulis maris MCS10] gi|114339056|gb|ABI64336.1| porphobilinogen deaminase [Maricaulis maris MCS10] Length = 321 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 114/309 (36%), Positives = 167/309 (54%), Gaps = 14/309 (4%) Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIV----IIPLSTKGDRITNRT 54 M+ +P I TR SPLAL A + ++ L + + I+ L + GDRI +RT Sbjct: 1 MKPPSRPLAIATRRSPLALVQARDVQAKLAAQCGLSGEDAERCFPILGLVSTGDRIQDRT 60 Query: 55 LTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT 114 L E GGKGLFT+EI++ + G AVHS KD+PT L G+ + A L RED RD+ I+ Sbjct: 61 LIEAGGKGLFTKEIDEAQLDGRAAFAVHSMKDVPTVLPDGIVLGALLEREDPRDMLIARD 120 Query: 115 AQSL-KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173 ++ DL IGT+SLRR+A LL R D+ V+ RG ++TRL KL + HA LA Sbjct: 121 GETRLADLPEGVTIGTASLRRQAQLLHKRPDLHVVPLRGNVDTRLGKLADGGIHATFLAR 180 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG+ RL + + +++ L ++ P+ QGA+ + + +A V ++H DT +V E Sbjct: 181 AGLNRLGRAEALRDPLEADEMLPAAAQGAVGVAIRDGDEEAASYVAGLHHRDTELAVLAE 240 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN-----RCDAINI 288 RAFL ELDGSC++ IA ++ F G VL DG+ + A Sbjct: 241 RAFLFELDGSCRTPIAAH--VNKVSMDFIGEVLTPDGQQSWRRQIRFDMTHATPDSARQA 298 Query: 289 GRDAAQYIR 297 G+D + +R Sbjct: 299 GQDLGRAVR 307 >gi|154150777|ref|YP_001404395.1| porphobilinogen deaminase [Candidatus Methanoregula boonei 6A8] gi|153999329|gb|ABS55752.1| porphobilinogen deaminase [Methanoregula boonei 6A8] Length = 294 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 91/301 (30%), Positives = 144/301 (47%), Gaps = 20/301 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LALA + + + +ST+GD +T L EIG +G+F Sbjct: 2 PVRIGTRGSRLALAQTAIVIKKIEAL----GIEVEQKIISTQGDEVTGVPLHEIGKQGVF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 ++ +++ EIDCAVHS KD+P G+ SA L R+ D ++ Sbjct: 58 VRALDDAILNNEIDCAVHSMKDIPAIRPSGVFTSAILKRDSPADYLAFTGP-----VSAV 112 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 V+GTSS RR+A LLR + + D RG ++TR+ K++ + +A++LA AG+ RL ++ Sbjct: 113 KVVGTSSTRRRAQLLRHDPGLDIRDLRGNVDTRIRKMSEGQYNAVVLAEAGLSRLGI-RI 171 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E L E F PSP QG I + +P E++ ++H T V ERA + ++ C Sbjct: 172 PGERLPPEKFVPSPNQGTIAV-VSRADPSIMEVLSSLDHPATRKDVAIERAVMEQVGAGC 230 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN-GNRCDAINIGRDAAQYIRFISNKN 303 + + + K VL+ DG + + G +A G +R + Sbjct: 231 FTPMGIYC--KDG--SLIAEVLSLDGTRAERIEKKIGTLEEARAEG----NALRERAGAL 282 Query: 304 V 304 + Sbjct: 283 I 283 >gi|303244099|ref|ZP_07330437.1| porphobilinogen deaminase [Methanothermococcus okinawensis IH1] gi|302485484|gb|EFL48410.1| porphobilinogen deaminase [Methanothermococcus okinawensis IH1] Length = 311 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 96/314 (30%), Positives = 154/314 (49%), Gaps = 17/314 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IGTR S LALA + ++ L ++++ ++ I + T GD+ L+E+G G+F Sbjct: 2 KIIIGTRGSKLALAQTYYIKNLLENLNENLSIDVKI--IKTTGDKNQKSKLSELG-LGVF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E++ K+++ EID AVHS KD+PT + L ISA RE D+ I + + + Sbjct: 59 TKELDTKMLNNEIDIAVHSLKDVPTVWNENLTISATPKRESYHDLIIWNKNNDIDIEKDN 118 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 ++GTSS+RRKA L ++ RG I+TRL KL N AI+LA AG+ RLK + Sbjct: 119 LIVGTSSIRRKAFLSIKYPNLKTKLLRGNIDTRLRKLRENNYDAIILAEAGLNRLKIDLS 178 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ P+P QG I + + ++ + +++K IN T+ ER L E G C Sbjct: 179 EFNYKRLKIL-PAPAQGVIGVASRKDDKEIIDILKKINDNKTYLESIAERYALREYGGGC 237 Query: 245 KSAIAGFAYCK--GSTLYFYG-IVLASDGKIFH---EVSRNGNRCD---AINIGRDAAQY 295 ++ + + LY +V +GK E + D A IG + Sbjct: 238 QAPFGALSKYDTKNNELYLTCDVVYTLNGKNNIISKEDKIQCDIEDIHLAKKIGIKLGKE 297 Query: 296 IR----FISNKNVF 305 I+ S K++ Sbjct: 298 IKEAESEKSEKHIL 311 >gi|295837224|ref|ZP_06824157.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74] gi|197699853|gb|EDY46786.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74] Length = 328 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 87/302 (28%), Positives = 143/302 (47%), Gaps = 26/302 (8%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M KP R+GTR S LA+A + ++ + P + ++ ++T GD L IGG Sbjct: 1 MTDKPLRLGTRRSKLAMAQSGLVADAVREATGRP---VALVEITTYGDTSR-EHLARIGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + L+ G++D AVHS KD+PT + L ++A RED RD I+ +L+ Sbjct: 57 TGVFVTALRDALLRGDVDFAVHSLKDLPTAQPEELVLAAIPRREDPRDALIARDGLALEQ 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + IGT S RR A L + RG ++TR+N + + + A++LA AG+ Sbjct: 117 LPRGARIGTGSPRRTAQLNAHARAHGLGIETVPIRGNVDTRINFVRDGELDAVVLAAAGL 176 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 RL + + + L + P+PGQGA+ +E E + ++ T +V ERA Sbjct: 177 HRLGRGAEVTQYLAPDTVLPAPGQGALAVECPPGP--LAEALARLDDPYTRAAVAAERAL 234 Query: 237 LAELDGSCKSAIAGFAYCKGST----------------LYFYGIVLASDGKIFHEVSRNG 280 LA L+ C + + A T + G+V ++DG +++ G Sbjct: 235 LATLEAGCSAPVGALADFPDGTQDQAARPNEPARQTTEMRLRGVVGSTDGSALVQLTTTG 294 Query: 281 NR 282 + Sbjct: 295 HV 296 >gi|330945628|gb|EGH47118.1| porphobilinogen deaminase [Pseudomonas syringae pv. pisi str. 1704B] Length = 201 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 82/201 (40%), Positives = 119/201 (59%), Gaps = 2/201 (0%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++GTSSLRR+A LL R D+ + RG + TRL KL+ + AI+LA AG+ RL Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLG 178 Query: 181 KEKVIKEILNIEDFPPSPGQG 201 E I ++++D P+ G G Sbjct: 179 FEDRITSAISVDDSLPAGGPG 199 >gi|302349001|ref|YP_003816639.1| Porphobilinogen deaminase [Acidilobus saccharovorans 345-15] gi|302329413|gb|ADL19608.1| Porphobilinogen deaminase [Acidilobus saccharovorans 345-15] Length = 298 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 81/297 (27%), Positives = 148/297 (49%), Gaps = 7/297 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 ++ TR S L+L L + + T+GD + +R L IG KG+F Sbjct: 3 KLKVATRGSKLSLEQVVIAMRFLEQRLG-ERVEYEPVIVKTRGDVMQDRPLFSIGVKGVF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS----HTAQSLKD 120 +E+ + +++GE D AVHS KD+P++L + L+I+ PRE D + ++D Sbjct: 62 EKEVNRAVLNGEADVAVHSMKDLPSQLEEDLEIAMVPPREVPNDSLVIGAGSPEVTGVED 121 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 + +GTSS+RR A L + ++ RG ++TR+ KLN + + +L+A AG++RL Sbjct: 122 VPSGLSVGTSSVRRIAFLRHYNRNVITKVVRGNVDTRIAKLNRGEVNYLLMAEAGLRRLN 181 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + +L ++ FPP PGQG I + ++P +L++ + E T+ ER F+ + Sbjct: 182 IPQKRV-MLPLDKFPPEPGQGIIAVVAPSSSP-LFDLLRRASDEVTYAMAMAERKFVELI 239 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C + I + +G L + DG++ + +G+ + I R+ + ++ Sbjct: 240 GAGCHTPIGAVSILEGGRLAMIAAAASPDGEVMNFARASGSLGEPERIARELVENLK 296 >gi|296108387|ref|YP_003620088.1| hydroxymethylbilane synthase [Legionella pneumophila 2300/99 Alcoy] gi|295650289|gb|ADG26136.1| hydroxymethylbilane synthase [Legionella pneumophila 2300/99 Alcoy] Length = 284 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 91/277 (32%), Positives = 145/277 (52%), Gaps = 1/277 (0%) Query: 30 VHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPT 89 V + P +I ++P+ T GDR L GGKGLF +E+E+ L+ D AVHS KDMP Sbjct: 3 VKQWPNLSIELLPMITSGDRFLKDKLLSAGGKGLFVKELEEALLDKRADLAVHSTKDMPA 62 Query: 90 KLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVID 149 +L GL ++A R++ D IS +SL L +++IGTSSLRR++ LL + ++ + Sbjct: 63 QLPDGLLLAAICKRDNPFDALISPQFKSLDALPKNAIIGTSSLRRQSQLLAYNPNLQIKT 122 Query: 150 FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209 RG I TRL+KL + + AI+LA AG++R+ I +++ + P+ QGA+CIE Sbjct: 123 LRGNIHTRLSKLESGEYQAIILAAAGLERMGLAHHITQLIPDDIMLPTCAQGALCIECRT 182 Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST-LYFYGIVLAS 268 ++ + QEL+ +N + V+ ER A+L G+C A + L VL Sbjct: 183 DDLEIQELIHGLNDPISALCVHTERRVNAKLGGNCHIPFAVYCTITEEKRLLLRAKVLNM 242 Query: 269 DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 DG + + G +A I + + ++ Sbjct: 243 DGSQMIDDEQQGKIAEAEVIADRCTESLMTKGAMSLL 279 >gi|50954011|ref|YP_061299.1| porphobilinogen deaminase [Leifsonia xyli subsp. xyli str. CTCB07] gi|55976376|sp|Q6AHF1|HEM3_LEIXX RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|50950493|gb|AAT88194.1| porphobilinogen deaminase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 329 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 83/312 (26%), Positives = 140/312 (44%), Gaps = 17/312 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR SPLA+A +++ +I ++ ++T GD +L+E+GG G+F Sbjct: 15 LRVGTRGSPLAVAQTQAVSAAVARATGF---DIELVTVTTHGDTSR-ESLSELGGTGVFA 70 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + L +GE D VHS KD+PT GL + A R D RD + +L + Sbjct: 71 TALRDALRNGECDLVVHSLKDLPTAPAPGLVLGAVPKRADARDTLCARDGLRFGELPEGA 130 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT S RR A L R + ++D RG ++TRL++++ A++LA AG+ RL + Sbjct: 131 SVGTGSPRRAAQLRAQRPGLDIVDIRGNVDTRLSRVSAGDLDAVVLAAAGLGRLGRLDAA 190 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV----INHEDTWDSVNCERAFLAELD 241 + ++ P +PGQGA+ +E + + + + ++H T + ERA LA L+ Sbjct: 191 TDFFSLSTMPTAPGQGALALEVREGDERGRGPIARALAAVDHATTCAATTAERAVLAGLE 250 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---------AINIGRDA 292 C + + A L+ V DG S A ++G Sbjct: 251 AGCAAPVGATAMIDDGLLFLTATVYRPDGAAQLTASHAATPDSFGAAHLDEAARDVGERV 310 Query: 293 AQYIRFISNKNV 304 + ++ Sbjct: 311 VAELLASGAADL 322 >gi|160937983|ref|ZP_02085340.1| hypothetical protein CLOBOL_02876 [Clostridium bolteae ATCC BAA-613] gi|158438977|gb|EDP16732.1| hypothetical protein CLOBOL_02876 [Clostridium bolteae ATCC BAA-613] Length = 302 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 96/304 (31%), Positives = 137/304 (45%), Gaps = 19/304 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR S LAL L V P + I+ T GDRI ++ L E GG Sbjct: 1 MND-IIRIGTRKSALALIQTQLVADELRQV--CPGIQVEIVTKDTLGDRILDKPLQEFGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG+F E E+ + G ID AVHSAKD+P +L +GL I+A RED RDV ++ Sbjct: 58 KGVFVSEFEQAIQEGVIDLAVHSAKDLPMELAQGLTIAAVSGREDPRDVLVT-MRGHRIR 116 Query: 121 LALHSVIGTSSLRRKALLLRWRS-------DISVIDFRGKIETRLNKLNNNKAHAILLAY 173 IGTSS RR+ RG + TRL KL I+LA Sbjct: 117 PESVVRIGTSSPRRQLQARLMCKTLWPEAAGAECSTLRGNVHTRLRKLEEENFDGIILAA 176 Query: 174 AGIKRLK---KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV 230 AG+KRL ++ L E+F P+ GQG + +E A L + ++H + Sbjct: 177 AGLKRLGLLEQDTYEYTFLAPEEFIPAGGQGLMAVEAK-AGTAAHSLAQAMDHAQGRLCL 235 Query: 231 NCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG--NRCDAINI 288 + ER+ L +LD C I ++ + L +G + + + + G +R D + Sbjct: 236 DLERSVLKQLDAGCHEPIGIYSVLQNGQLEVWG-ISSPR-EEVKRIHLTGGTSRRDIEKL 293 Query: 289 GRDA 292 +A Sbjct: 294 ASEA 297 >gi|289811310|ref|ZP_06541939.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 235 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 79/225 (35%), Positives = 116/225 (51%) Query: 81 VHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLR 140 +HS KD+P GL + RED RD F+S+ SL DL S++GTSSLRR+ L Sbjct: 1 MHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAE 60 Query: 141 WRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQ 200 R D+ + RG + TRL KL+N AI+LA AG+KRL E I+ L + P+ GQ Sbjct: 61 RRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTALPPDVSLPAVGQ 120 Query: 201 GAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY 260 GA+ IE +++ + Q L+ +NH T V ERA L+G C+ I +A ++ Sbjct: 121 GAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGCQVPIGSYAEIINGEIW 180 Query: 261 FYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +V A DG + R G+ A +G A+ + + + Sbjct: 181 LRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENGARAIL 225 >gi|227538630|ref|ZP_03968679.1| porphobilinogen deaminase [Sphingobacterium spiritivorum ATCC 33300] gi|227241549|gb|EEI91564.1| porphobilinogen deaminase [Sphingobacterium spiritivorum ATCC 33300] Length = 528 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 85/294 (28%), Positives = 139/294 (47%), Gaps = 15/294 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + IGTR S LA+ A + L + + + T+GD I + L ++ GK Sbjct: 1 MNRKLIIGTRGSQLAMWQANHIKDRLAAA----GIDSELKVIKTQGDIIQHLRLDKLEGK 56 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI----SHTAQS 117 G FT+E+E++L+S ID AVHS KD+PT GL I+A RE ++ I + Sbjct: 57 GFFTKELEEELLSSTIDLAVHSHKDLPTVNPPGLIIAAVSERESPAELLIVLKDCVDIKK 116 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L ++ +GTSS RRKA LL R D+ D RG ++TR+ KL + AI+LA AG++ Sbjct: 117 RLSLKHNATVGTSSNRRKAQLLSLRPDLEFDDLRGNLQTRIQKLRDENYDAIILAKAGVE 176 Query: 178 RLKKE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R+ + E + + P+P QG + I+ ++ + E ++VI++++ + + ER Sbjct: 177 RIDMDLSDFYVEEIPPVELIPAPAQGVLAIQIRESDQELFEALQVIHNKEVAEVIAVERK 236 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLA-----SDGKIFHEVSRNGNRCD 284 L D C + + + + V D S G + Sbjct: 237 VLNLFDAGCHAPLGCYCRKSEGKYEAWTSVAETSDEFPDRLYIQRDSTEGMAEE 290 >gi|323484735|ref|ZP_08090094.1| porphobilinogen deaminase [Clostridium symbiosum WAL-14163] gi|323401972|gb|EGA94311.1| porphobilinogen deaminase [Clostridium symbiosum WAL-14163] Length = 297 Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 94/298 (31%), Positives = 144/298 (48%), Gaps = 6/298 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIG+R S LA+ + + V P + ++ + T GD I +++L +IGG Sbjct: 1 MINGTIRIGSRESVLAVIQSELIIEEIKRV--CPGVSAQLVTMKTTGDMILDKSLEQIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+++ L+ G D VHS KDMP ++ + L I AY RED RDV + + L+ Sbjct: 59 KGLFVKELDRALLDGRCDLTVHSLKDMPMEVPERLPILAYSKREDKRDVLVLR--KGLES 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L VIGT S RR+ R D RG + TRL KL++ + A++LA AG+ R+ Sbjct: 117 LPAGPVIGTFSRRRRMQAARLYPDAVFKGIRGNLVTRLRKLDDGEYDALILAAAGLIRMG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++ PS GQG + ++ +K ++ D+ ERAF+ L Sbjct: 177 FEGRISRYFSVDEIIPSAGQGIMAVQ--GRKEDYFPFMKEVDAPDSRAMALAERAFVRIL 234 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 DG C S A A LY G+ + G +A +G A ++ Sbjct: 235 DGGCSSPCAACAEAAAGRLYLRGLYYDEASDRYITGEMEGMAEEAEQLGVKLALTLKN 292 >gi|288574447|ref|ZP_06392804.1| porphobilinogen deaminase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570188|gb|EFC91745.1| porphobilinogen deaminase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 454 Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 140/291 (48%), Gaps = 10/291 (3%) Query: 10 TRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIE 69 +R S LA A E +L + I +ST GD + L+ GG G F + +E Sbjct: 160 SRKSALARAQTMEAARALAKK----GLPVEIKTMSTCGDEKQDCHLSAFGGNGAFVKCLE 215 Query: 70 KKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGT 129 + ++ G+ D A+HS KD+P+ L GL++ A LPR DV +S+ L+ L +V+GT Sbjct: 216 EAIMEGKGDGAIHSLKDVPSVLPDGLELVAVLPRASTSDVIVSNHKGGLEGLPAGAVVGT 275 Query: 130 SSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEIL 189 SSLRRKA L R D+ RG + TRL KL + A AI+LA AG+ RL L Sbjct: 276 SSLRRKAQLAITRPDLDYTLIRGNVNTRLAKLQSGDADAIVLAKAGLDRLGISPEGATTL 335 Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 F P+P QG I +E + + E + INH TW ER L L C A Sbjct: 336 P---FLPAPCQGIIAVEAR-SGSRLAEEFRAINHRPTWLMALAERELLESLQVGCHVPFA 391 Query: 250 GFAYCKGSTLYFYGIVLASDGKIF-HEVS-RNGNRCDAINIGRDAAQYIRF 298 + G L L+ DG+ E S + DA ++GRD A I+ Sbjct: 392 ALSEWVGGELRLRAQTLSYDGRHIDFEGSLAVRSDDDARDLGRDVALSIKA 442 >gi|91782420|ref|YP_557626.1| porphobilinogen deaminase [Burkholderia xenovorans LB400] gi|91686374|gb|ABE29574.1| Porphobilinogen deaminase [Burkholderia xenovorans LB400] Length = 285 Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 98/265 (36%), Positives = 147/265 (55%), Gaps = 3/265 (1%) Query: 43 LSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLP 102 ++T+GD+I +RTL+++GGKGLF +E+E L G D AVHS KD+P L +G +S + Sbjct: 1 MTTRGDQILDRTLSKVGGKGLFVKELEAALADGRADLAVHSLKDVPMALPEGFALSTIME 60 Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 RED RD +S+T SL L +V+GTSSLRR+A+L + V RG ++TRL KL+ Sbjct: 61 REDPRDALVSNTYDSLAALPEGAVVGTSSLRREAMLRMRYPHLEVRPLRGNLDTRLAKLD 120 Query: 163 NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 AI+LA AG+KRL + I+ +L+ ED P+ GQGA+ IE + + + ++ Sbjct: 121 RGDYAAIILAAAGLKRLGLGERIRALLDPEDSLPAAGQGALGIEIRADRAELAAWLAPLH 180 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN- 281 HE T +V ER L GSC+ +A +A L+ GIV DG+ + Sbjct: 181 HEHTAAAVEAERMVSRALGGSCEVPLAAYATWHDGALHLRGIVATPDGQRVLSAQASAPA 240 Query: 282 --RCDAINIGRDAAQYIRFISNKNV 304 AI +G++ A + + Sbjct: 241 TSVEQAIALGQEVAGALEQQGAMEI 265 >gi|126460312|ref|YP_001056590.1| porphobilinogen deaminase [Pyrobaculum calidifontis JCM 11548] gi|158513494|sp|A3MWV7|HEM3_PYRCJ RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|126250033|gb|ABO09124.1| porphobilinogen deaminase [Pyrobaculum calidifontis JCM 11548] Length = 296 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 89/296 (30%), Positives = 138/296 (46%), Gaps = 8/296 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+ TR S L+L E + V P ++ + T GD + +R L +IG KG+F Sbjct: 2 KIRVATRGSKLSLLQTQELLDQVKAVE--PKVEFELVVVKTTGDVVQDRPLYQIGVKGIF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ ++ GE D AVHS KD+P++L GL I+ + R DV S SL L Sbjct: 60 EKEVNLAVLRGEADVAVHSLKDLPSELTPGLVIAGFSRRAPPYDVVASREGYSLYTLPKG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE-- 182 +V+GTSS+RR L R D+ V RG ++TR+ K+ + + A ++A AG+ RL Sbjct: 120 AVVGTSSVRRAEFLRAVRPDVEVRPLRGNVDTRVGKILSGQYDAAIMAMAGLVRLYGWEA 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 V + E+ PP PGQG + ++++ + ER FL + Sbjct: 180 PVKLSPIRPEEIPPPPGQGIVVAVVKEGEAWLIDILRRASDRRAAVEATAEREFLMHVGA 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 C A+ G A + + F + G + + G D +GR AA+ IR Sbjct: 240 GCHVAVGGLARYEDGGMSFVAGYAS--GGRRYVIKLWG--EDPREVGRRAAEEIRK 291 >gi|242827493|ref|XP_002488841.1| porphobilinogen deaminase, putative [Talaromyces stipitatus ATCC 10500] gi|218712002|gb|EED11431.1| porphobilinogen deaminase, putative [Talaromyces stipitatus ATCC 10500] Length = 413 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 104/338 (30%), Positives = 154/338 (45%), Gaps = 36/338 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITN---RTLTEIGG 60 K R+G+R S +AL ++L H + S +GDR R L + G Sbjct: 72 KAVRVGSRNSKMALIQTSSVAAALYKAHHGF-FTFPVSTHSVQGDRDKTSAFRDLAKAHG 130 Query: 61 ---------KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI 111 K L+T EIE +L++G+ID VHS KD+PT L G +I A+ R D D + Sbjct: 131 NKQTAADTAKSLWTLEIEARLLAGDIDLIVHSLKDVPTTLPDGCEIGAFPHRNDPTDALL 190 Query: 112 SH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KA 166 +SL++L SV+GT S+RR A L + + + + RG ++TR+ KL+ N Sbjct: 191 VKAGLPYKSLEELPAGSVVGTCSVRRTAQLRHYCPHLIIQECRGNVDTRVAKLDANDSPY 250 Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226 AI++A AGI RL E I + L+ + + GQGA+ IE + KA+ELV I+H T Sbjct: 251 TAIVVAAAGIVRLNLEHRITQRLSGPAYTYAVGQGALGIEIRKEDQKARELVACIDHWPT 310 Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCK---------------GSTLYFYGIVLASDGK 271 ERA L L G C + I + TLY G +L DG Sbjct: 311 RVRCLAERALLRFLQGGCSAPIGVHSAFVRTPAKGEPNVNDNHYEGTLYLTGTLLHPDGG 370 Query: 272 IFHEVSRNGNR---CDAINIGRDAAQYIRFISNKNVFN 306 + G D+ IG+ + I + + + Sbjct: 371 MEIRAHEKGQVKCTADSETIGKSVGKKILDLGGAQILD 408 >gi|269837831|ref|YP_003320059.1| porphobilinogen deaminase [Sphaerobacter thermophilus DSM 20745] gi|269787094|gb|ACZ39237.1| porphobilinogen deaminase [Sphaerobacter thermophilus DSM 20745] Length = 311 Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 103/299 (34%), Positives = 158/299 (52%), Gaps = 3/299 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LA ++L + P ++ +ST GDR LT IGG+G+F Sbjct: 11 VRLGTRGSALAREQTRRVMAALAALR--PDLELIETIVSTAGDRDKRTPLTVIGGQGVFA 68 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E++ L++G +D AVHSAKD+PT+ + GL I A+ RED RDV +S +SL DL + Sbjct: 69 RELQTALLAGTVDVAVHSAKDLPTEPVPGLVIGAFFSREDARDVLVSRDGRSLADLPPGA 128 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS RR L R R D+ +D RG ++TRL K+ + A +LA AG+ R+ ++ I Sbjct: 129 RVGTSSRRRLVALRRLRPDLEAVDLRGNLDTRLRKVREGEVDAAILAAAGLLRMGWQEHI 188 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L+++DF P+PGQGA+ IE ++P E++ +N + ER+FL L G C+ Sbjct: 189 TEFLSLDDFVPAPGQGALAIECRADDPAVNEMLAALNDPAAALAARTERSFLRALGGGCR 248 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI-RFISNKN 303 S I A G T+ ++ + +A A + R ++ + Sbjct: 249 SPIGAHATVSGDTVTLRVMLGDEAMTRVRLSTWTLPAAEAETRAGALAVEVQRSLAGAD 307 >gi|145476419|ref|XP_001424232.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124391295|emb|CAK56834.1| unnamed protein product [Paramecium tetraurelia] Length = 306 Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 93/311 (29%), Positives = 152/311 (48%), Gaps = 16/311 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTK-GDRITNRTLTEIG 59 M+K+ RI TR S LA+A L II +S + GD L ++ Sbjct: 1 MQKQ-IRIATRSSALAMAQTNYVIGELKQ-------EFEIIKVSNEVGDVNLQDPLYQMP 52 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQ 116 G+FT+++E+ L+ + D AVHS KD+PT + L ++AY E DV + + + Sbjct: 53 TVGVFTKQVEQYLLEQKADVAVHSLKDLPTIIDAQLYLAAYTKFEQRGDVVLLNNKYNYK 112 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 SL +L IGTSSLRR A + +++I+ RG + TR+ KL+ + AI+LA AGI Sbjct: 113 SLSELPEGFKIGTSSLRRIATIKNRYPKLNLINIRGNLNTRIQKLDEGQYDAIILAKAGI 172 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 RL + I L ++F +P Q A+ I+ ++ + ++++N D+ ER F Sbjct: 173 LRLGLSERISFDLEEKEFLYAPAQAALGIQCRKDDLQTIARLQILNDIDSQKRCVAERMF 232 Query: 237 LAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 L L+G C+ IA ++ C + +Y G V+A DG E +G+ + Sbjct: 233 LNLLEGGCRLPIAVYSECREDGQVYIKGRVMAVDGSKVIEDEA---LDHFEKVGQILCEK 289 Query: 296 IRFISNKNVFN 306 I+ + + Sbjct: 290 IKVLGGVELIE 300 >gi|323691803|ref|ZP_08106060.1| hypothetical protein HMPREF9475_00922 [Clostridium symbiosum WAL-14673] gi|323504169|gb|EGB19974.1| hypothetical protein HMPREF9475_00922 [Clostridium symbiosum WAL-14673] Length = 297 Score = 185 bits (469), Expect = 8e-45, Method: Composition-based stats. Identities = 94/298 (31%), Positives = 144/298 (48%), Gaps = 6/298 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIG+R S LA+ + + V P + ++ + T GD I +++L +IGG Sbjct: 1 MINGTIRIGSRESVLAVIQSELIIEEIKRV--CPGVSAQLVTMKTTGDMILDKSLEQIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+++ L+ G D VHS KDMP ++ + L I AY RED RDV + + L+ Sbjct: 59 KGLFVKELDRALLDGRCDLTVHSLKDMPMEVPERLPILAYSKREDKRDVLVLR--KGLES 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L VIGT S RR+ R D RG + TRL KL++ + A++LA AG+ R+ Sbjct: 117 LPAGPVIGTFSRRRRMQAARLYPDAVFKGIRGNLVTRLRKLDDGEYDALILAAAGLIRMG 176 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E I ++++ PS GQG + ++ +K ++ D+ ERAF+ L Sbjct: 177 FEGRISRYFSVDEIIPSAGQGIMAVQ--GRKEDYFPFIKEVDAPDSRAMALAERAFVRIL 234 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 DG C S A A LY G+ + G +A +G A ++ Sbjct: 235 DGGCSSPCAACAEAAAGRLYLRGLYYDEASDRYITGEMEGMAEEAEQLGVKLALTLKN 292 >gi|237786464|ref|YP_002907169.1| Porphobilinogen deaminase [Corynebacterium kroppenstedtii DSM 44385] gi|237759376|gb|ACR18626.1| Porphobilinogen deaminase [Corynebacterium kroppenstedtii DSM 44385] Length = 295 Score = 185 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 94/306 (30%), Positives = 142/306 (46%), Gaps = 20/306 (6%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGGKGL 63 RIGTR S LAL A R +L+ + + T GD + IG G+ Sbjct: 2 IRIGTRGSALALTQAGHVRDALISA----GLEAELFTVHTPGDASQGAGTPVARIG-VGV 56 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+ + L +GE AVHS KD+PT ++ A PR D RDV S L DL Sbjct: 57 FTQTLRTALAAGECSLAVHSFKDLPTAPDPRFRL-AVPPRVDARDVVFSRDRIPLADLPA 115 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S+IGT + RR + R D +V+ RG ++TR+ +L + A++LA AG++RL + Sbjct: 116 GSMIGTGAPRRMGQVRALRPDCTVVPIRGNVDTRIGRLEKDL-DAVILARAGVERLGRLA 174 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI-----NHEDTWDSVNCERAFLA 238 E L+++ P+P QGA+ +E + + +HE + ERA LA Sbjct: 175 EATETLDVDTVLPAPAQGALAVEAVAEGHENCSEEALYAIHVLDHEMSHRRAIAERAVLA 234 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L+ C + + +A F V A DG S G + +IG AA+Y+R Sbjct: 235 SLNAGCTAPVGAYATED----SFRAGVFAVDGSERVTWSSEGEPTE--DIGHQAAEYLRA 288 Query: 299 ISNKNV 304 + ++ Sbjct: 289 HNAMDL 294 >gi|328908097|gb|EGG27856.1| hydroxymethylbilane synthase [Propionibacterium sp. P08] Length = 334 Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats. Identities = 96/333 (28%), Positives = 147/333 (44%), Gaps = 34/333 (10%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M R+GTR S LA + L ++ + ++T+GD + +L +GG Sbjct: 1 MS--AIRLGTRASTLATTQSEMVAGMLRS----EGLDVDLTTITTRGDT-STTSLAAMGG 53 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F I L+ G+ D AVHS KD+PT GL I A RED RD ++ +L D Sbjct: 54 IGVFASAIRAALLGGDADIAVHSFKDLPTGRPLGLTIGAVPHREDPRDALVARDGLTLND 113 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------NNKAHAIL 170 L + +GT S RR A LL R D+++ID RG ++TRL ++ A++ Sbjct: 114 LPQGASVGTGSPRRAAQLLAVRPDLTIIDIRGNVDTRLGRVKGLGHYAQGSGTEDLDAVV 173 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV---KVINHEDTW 227 LA +G+ RL V+ E LN P+P QGA+ +E + + +L I+ T Sbjct: 174 LAASGLARLGHSDVVTEFLNPSVMLPAPAQGALAVECRAADSRHGKLAKALAKIDDRPTR 233 Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCK------GSTLYFYGIVLASDGKIFHEVSRNGN 281 + ERA L+ L+ C + I A K L +V A DG + Sbjct: 234 LAATAERAVLSHLEAGCAAPIGALAQLKPAPGKSPEVLTLDVVVTAVDGSRTIREQVSVE 293 Query: 282 RCD--------AINIGRDAAQYIRFISNKNVFN 306 + A +G AA+ + +V + Sbjct: 294 LPEEVDPALAAAHTLGMTAAEELLDDGAADVAD 326 >gi|313835649|gb|EFS73363.1| porphobilinogen deaminase [Propionibacterium acnes HL037PA2] gi|314928321|gb|EFS92152.1| porphobilinogen deaminase [Propionibacterium acnes HL044PA1] gi|314970250|gb|EFT14348.1| porphobilinogen deaminase [Propionibacterium acnes HL037PA3] Length = 337 Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats. Identities = 96/333 (28%), Positives = 147/333 (44%), Gaps = 34/333 (10%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M R+GTR S LA + L ++ + ++T+GD + +L +GG Sbjct: 4 MS--AIRLGTRASTLATTQSEMVAGMLRS----EGLDVDLTTITTRGDT-STTSLAAMGG 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F I L+ G+ D AVHS KD+PT GL I A RED RD ++ +L D Sbjct: 57 IGVFASAIRAALLGGDADIAVHSFKDLPTGRPLGLTIGAVPHREDPRDALVARDGLTLND 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------NNKAHAIL 170 L + +GT S RR A LL R D+++ID RG ++TRL ++ A++ Sbjct: 117 LPQGASVGTGSPRRAAQLLAVRPDLTIIDIRGNVDTRLGRVKGLGHYAQGSGTEDLDAVV 176 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV---KVINHEDTW 227 LA +G+ RL V+ E LN P+P QGA+ +E + + +L I+ T Sbjct: 177 LAASGLARLGHSDVVTEFLNPSVMLPAPAQGALAVECRAADSRHGKLAKALAKIDDRPTR 236 Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCK------GSTLYFYGIVLASDGKIFHEVSRNGN 281 + ERA L+ L+ C + I A K L +V A DG + Sbjct: 237 LAATAERAVLSHLEAGCAAPIGALAQLKPAPGKSPEVLTLDVVVTAVDGSRTIREQVSVE 296 Query: 282 RCD--------AINIGRDAAQYIRFISNKNVFN 306 + A +G AA+ + +V + Sbjct: 297 LPEEVDPALAAAHTLGMTAAEELLDDGAADVAD 329 >gi|32490989|ref|NP_871243.1| hypothetical protein WGLp240 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166195|dbj|BAC24386.1| hemC [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 291 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 85/287 (29%), Positives = 146/287 (50%), Gaps = 3/287 (1%) Query: 20 AFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDC 79 + + L +H P NI ++P+ T GD I KGLF +E+EK L+ + D Sbjct: 3 SKLCKKKL--LHYHPKLNIKLVPILTTGDLINKIRNNITNEKGLFIKELEKSLLKYQSDI 60 Query: 80 AVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLL 139 AVHS KD + L L ++A R+D RD +S+ ++ L ++ +GTSSLRRK LL Sbjct: 61 AVHSMKDFSSSFLDSLGLAAICKRDDPRDAIVSNYYNNIISLPNNAKVGTSSLRRKCQLL 120 Query: 140 RWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPG 199 R D+ + +G I +RL KLN A++LA A +KRLK + + ++ P+ G Sbjct: 121 SIRPDLKIFPCKGNIHSRLKKLNQGVFDALILATAALKRLKINEQMYTPIDPSYLLPAMG 180 Query: 200 QGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG-ST 258 QG+I I+ + + K ++V+ IN++ T +N E+ ++ L C+ I +A + +T Sbjct: 181 QGSIAIQCRLYDNKIIDIVRNINNKKTALCINSEKIVVSMLGTGCRVPIGSYAKIENKNT 240 Query: 259 LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 ++ +V + DG +A + + + + + KN+ Sbjct: 241 IWIRALVGSIDGSNIIRSEGKSCVSNAEKLSKKQVKNLINLGAKNIL 287 >gi|256826210|ref|YP_003150170.1| hydroxymethylbilane synthase [Kytococcus sedentarius DSM 20547] gi|256689603|gb|ACV07405.1| hydroxymethylbilane synthase [Kytococcus sedentarius DSM 20547] Length = 358 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 90/332 (27%), Positives = 149/332 (44%), Gaps = 36/332 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA + +L H + ++ ++T+GD L+ IGG G+ Sbjct: 14 RVVRLGTRRSDLATTQSTHVADALRAR----GHEVELVLVTTEGDVNR-APLSRIGGTGV 68 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F + L++GEID AVHS KD+P + L I+A RED RD ++ +L+ L Sbjct: 69 FVSALRDALLAGEIDIAVHSLKDLPVAQPQELVIAAVPEREDPRDALVARDGLTLETLPA 128 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GT S RR+A L R D+ V+D RG + RL + + A++LA AG++RL + Sbjct: 129 GARVGTGSPRREAQLRVARPDLEVVDLRGNVPRRLATVAEGELDAVVLAGAGLRRLGLTE 188 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 + + L + P+PGQGA+ +E ++ ++ +++ ++H T + ERA L L+ Sbjct: 189 HVTQWLEPQVMVPAPGQGALAVECRSDDAESIAMLEPLDHLPTRTATTAERAVLGTLEAG 248 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFH----------------------------- 274 C + I A G+ + DG Sbjct: 249 CSAPIGALARHDGARVDLMTFAGPRDGSRALLEADCARGVPAGHPADTPDDTPADTPDDS 308 Query: 275 -EVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 R A +GR A+ +R +V Sbjct: 309 RNDDRVALDTAARELGRRVAEALRG-GGADVL 339 >gi|312216693|emb|CBX96643.1| hypothetical protein [Leptosphaeria maculans] Length = 398 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 101/346 (29%), Positives = 144/346 (41%), Gaps = 47/346 (13%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG---- 60 P IGTR S LA A SL + H P I P+ +GDR L ++ Sbjct: 30 PINIGTRNSVLAQIQARAVERSLKEAH--PERTYNICPVVVQGDRDKTTPLQQLSRGENA 87 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS----HTAQ 116 K L+T E+E L SGE+D VH KDMPT+L L++ A L RED RD + Sbjct: 88 KSLWTGELESMLESGELDLIVHCLKDMPTQLPDNLELGAILEREDPRDALLISPRLPKET 147 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYA 174 +L L + IGTSS+RR A L + + D RG + TRL KL+ AI+LA A Sbjct: 148 TLATLPQGATIGTSSVRRSATLRKLFPHLKFADLRGNVGTRLAKLDAEDSPYSAIILAAA 207 Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 G+KR+ + I + L+ + GQGA+ IE + + L+ I E T + + Sbjct: 208 GLKRMGLDNRITQYLSSTSGGMLHAVGQGALGIEIRKGDESTKALLSKIRCERTTRACSA 267 Query: 233 ERAFLAELDGSCKSAIAGFA------------------------------YCKGSTLYFY 262 ERA L L+G C I + L Sbjct: 268 ERALLRTLEGGCSVPIGVETSWRGGRGLTTGAQPARDYDKHGNAVEEEEPHVDDQELVLR 327 Query: 263 GIVLASDGKIFHEVSR---NGNRCDAINIGRDAAQYIRFISNKNVF 305 +V++ DG E + +A +GR+ A + + Sbjct: 328 TLVVSVDGTESVEYEVAQKVRSAEEAETMGREVALKLIEKGADKIL 373 >gi|49388603|dbj|BAD25718.1| putative porphobilinogen deaminase [Oryza sativa Japonica Group] gi|215686353|dbj|BAG87614.1| unnamed protein product [Oryza sativa Japonica Group] gi|215717107|dbj|BAG95470.1| unnamed protein product [Oryza sativa Japonica Group] Length = 264 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 105/260 (40%), Positives = 156/260 (60%), Gaps = 3/260 (1%) Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109 I ++ L +IGGKGLFT+EI+ L+ G ID AVHS KD+PT L +G + LPRED+RD Sbjct: 2 ILDKPLADIGGKGLFTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDA 61 Query: 110 FISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAI 169 FI TA SL +L SV+G++SLRR++ +L + V++FRG ++TRL KL HA Sbjct: 62 FICLTASSLAELPAGSVVGSASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHAT 121 Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 LLA AG+KRL + +L++++ P+ QGAI I ++ + +NHEDT + Sbjct: 122 LLALAGLKRLNMAETATSVLSVDEMLPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLA 181 Query: 230 VNCERAFLAELDGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD--AI 286 V CER FL+ LDG+C++ IA +A K F G++ + DG +E SR G + Sbjct: 182 VACEREFLSVLDGNCRTPIAAYASRDKDGNCSFRGLLASPDGSTVYETSRTGPYDFDIMV 241 Query: 287 NIGRDAAQYIRFISNKNVFN 306 +G+DA ++ + F+ Sbjct: 242 EMGKDAGHELKAKAGPGFFD 261 >gi|332666630|ref|YP_004449418.1| porphobilinogen deaminase [Haliscomenobacter hydrossis DSM 1100] gi|332335444|gb|AEE52545.1| porphobilinogen deaminase [Haliscomenobacter hydrossis DSM 1100] Length = 300 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 87/306 (28%), Positives = 145/306 (47%), Gaps = 15/306 (4%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGD--RITNRTLTEIG 59 + RIGTR S LAL A TR L + + ++ + T GD + N + +I Sbjct: 1 MDQTIRIGTRGSKLALWQAEFTREKLREA----GYASELVIIKTTGDNTQHLNLSFDKIE 56 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ--- 116 GKG FT+EIE L+ G++D AVHS KDMPT GL ++A RED D + Sbjct: 57 GKGFFTKEIEDALLRGDVDMAVHSMKDMPTSSPDGLVLTAVSYREDPADWLLVRKESLEE 116 Query: 117 -SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 L + ++GTSS RRKA +L R D ++ D RG + TR++KL + AI+LA AG Sbjct: 117 GQRFQLKQNPIVGTSSARRKAQILDLRPDATLKDIRGNVPTRVDKLLQGEFDAIMLAAAG 176 Query: 176 IKRLKKEKVIKE--ILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 + RL+ + + +F P+P QG + + + ++ ++ ++H D N E Sbjct: 177 LSRLELDLSAVHVVKFDPREFIPAPAQGVLAYQACTEDKVIRKALQHLHHSDVSLVTNIE 236 Query: 234 RAFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292 R L ++G C+ + + + + + +V ++ + + Sbjct: 237 RRILQLMEGGCQMPLGVYCEHDAAGNYHVWAAKADAWNAPVKKVRQSSSTS--YLLAEKV 294 Query: 293 AQYIRF 298 A+ ++ Sbjct: 295 AEELKK 300 >gi|282853361|ref|ZP_06262698.1| hydroxymethylbilane synthase [Propionibacterium acnes J139] gi|282582814|gb|EFB88194.1| hydroxymethylbilane synthase [Propionibacterium acnes J139] Length = 334 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 92/333 (27%), Positives = 142/333 (42%), Gaps = 34/333 (10%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M R+GTR S LA + L ++ + ++T GD + +L +GG Sbjct: 1 MS--AIRLGTRASTLATTQSEMVARLLRS----EGLDVDLTTITTHGDT-STASLAAMGG 53 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F I L+ GE D AVHS KD+PT GL I A R D RD ++ +L D Sbjct: 54 IGVFASAIRATLLKGEADIAVHSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHD 113 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------NNKAHAIL 170 L + +GT S RR A LL R D++++D RG ++TRL ++ A++ Sbjct: 114 LPQEASVGTGSPRRAAQLLAVRPDLTIVDIRGNVDTRLGRVKGLGHYAKGGGKEDLDAVV 173 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV---KVINHEDTW 227 LA +G+ RL + E L+ P+P QGA+ +E + + +L I+ T Sbjct: 174 LAASGLARLGHSGTVTEFLDPSVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTR 233 Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCK------GSTLYFYGIVLASDGKIFHE------ 275 + ERA L+ L+ C + I A K L +V DG Sbjct: 234 LAATAERAVLSHLEAGCAAPIGALAQLKPVSGSSPQVLTLDVVVATVDGSRIIREQVSVE 293 Query: 276 --VSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 + A +G AA+ + +V + Sbjct: 294 LPAEVDSALAAAHTLGVTAAEELLDDGAADVAD 326 >gi|269791662|ref|YP_003316566.1| porphobilinogen deaminase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099297|gb|ACZ18284.1| porphobilinogen deaminase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 307 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 100/299 (33%), Positives = 146/299 (48%), Gaps = 14/299 (4%) Query: 10 TRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIE 69 TR SPLA+A A + + + H++ ++ +ST GDR R L GG G F + +E Sbjct: 8 TRSSPLAMAQARMWKDRIESL----GHSVRLLDVSTHGDRDRRRHLACFGGFGAFVKALE 63 Query: 70 KKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGT 129 +L+SG+ AVHS KD+P+ GL I+ L R DV ++ SL++L +VIGT Sbjct: 64 DRLLSGQGHGAVHSLKDVPSVQPDGLVIAGVLERGPRGDVLVTREGLSLEELPSGAVIGT 123 Query: 130 SSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEIL 189 SS+RR A + R D++V RG + +RL KL H I+LA AG++RL + E+ Sbjct: 124 SSIRRAAQVRMLRGDLNVECCRGNVHSRLRKLEQGLFHGIVLARAGLERLGIRAPMAELP 183 Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 F SPGQGA+ +E + L + H TW V ER+FL C + +A Sbjct: 184 ----FITSPGQGAVALEAR-EGSELHLLGARLTHRSTWLEVLAERSFLKAFGMGCSAPVA 238 Query: 250 GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISNKNVF 305 A TL VL+ +G E + DA +G A + I + V Sbjct: 239 ASAVMDRDTLTLKVQVLSPNGTSAAEAEVSCVPWGEEDAYALGEAAFREI--SGSPEVL 295 >gi|311111780|ref|YP_003983002.1| hydroxymethylbilane synthase [Rothia dentocariosa ATCC 17931] gi|310943274|gb|ADP39568.1| hydroxymethylbilane synthase [Rothia dentocariosa ATCC 17931] Length = 371 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 95/367 (25%), Positives = 146/367 (39%), Gaps = 65/367 (17%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSL--------MDVHKIPPHNIVIIPLSTKGDRITN 52 M P+ +GTR S LAL + + + + I + T GD + Sbjct: 1 MSD-PYILGTRGSALALTQSTLAAEHIVQMFNAHSREHGAERTLSFDITTVKTDGD-VLT 58 Query: 53 RTLTEIGGKGLFTEEIEKKLISGEI----DCAVHSAKDMPTKLLKGLQISAYLPREDIRD 108 L +GG G+F + ++L+ G+ D AVHS KD+P + GL I+A L RED RD Sbjct: 59 GPLATLGGTGVFAAALRQRLLDGDTPDGVDVAVHSLKDLPAEPCPGLVIAAILEREDPRD 118 Query: 109 VFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL------- 161 ++ +L L + +GT S RR A + R D+ ++D RG + TR+ ++ Sbjct: 119 ALVARDNLTLDTLPTGARVGTGSPRRAAQVHALRPDLEIVDIRGNVGTRIARVKGLEEHG 178 Query: 162 -----------------------NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSP 198 N A++LA +G+KRL KE VI E L+ P+P Sbjct: 179 NRQVIVRDSAETDEAAHRGIGTENTGDCDAVILAVSGLKRLGKESVITEYLDPSRMLPAP 238 Query: 199 GQGAICIETHVNNPKAQELVK------------------VINHEDTWDSVNCERAFLAEL 240 GQGA+ IE + +H +T V ER L L Sbjct: 239 GQGALAIEVRETEFANPDTATLFNSEISQPVRTLGEALIAADHFETHLEVTAERRLLRRL 298 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE-VSRNGNRC--DAINIGRDAAQYIR 297 + C + I +A K L +V + DG S G A +G A+ + Sbjct: 299 EAGCAAPIGAYATVKDGDLVLTAVVASPDGTESLRHTSATGELDVPGAERLGIRVAEDLL 358 Query: 298 FISNKNV 304 + + Sbjct: 359 QMGAAAL 365 >gi|88603799|ref|YP_503977.1| porphobilinogen deaminase [Methanospirillum hungatei JF-1] gi|88189261|gb|ABD42258.1| hydroxymethylbilane synthase [Methanospirillum hungatei JF-1] Length = 295 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 88/301 (29%), Positives = 138/301 (45%), Gaps = 20/301 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA A A + + L D+ + ++ +ST GD T L EIGG+G+F Sbjct: 2 PLRVGTRASELAKAQAVKVCTMLEDL----GVDTELVFISTAGDEQTGVPLHEIGGQGVF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 ++ L+ +ID AVHS KD+P + GL SA L R+ D + + +L Sbjct: 58 VRALDDALVQNKIDLAVHSMKDIPAERPYGLVTSAILARDSPCDYIV-----TDHELDEI 112 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSS RR A R + RG + TRL+KL + + AI+LA AG++RL Sbjct: 113 TTLGTSSTRRTAQCRRNLPWADIRPLRGNVNTRLSKLQSGEYDAIMLAKAGLERLSMTLD 172 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + L+ PSP QG I + +P +++ I+ T ER + + G C Sbjct: 173 GYQ-LDPRVHVPSPNQGTIAV-VSRTDPDVTDIISKIDDPKTRMDTLLERRVMEMIGGGC 230 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-NGNRCDAINIGRDAAQYIRFISNKN 303 + + + L VL+ +G + R + DA G + R + Sbjct: 231 FTPLGIYCK---DRL-MIAEVLSLEGDRHFRLERLVSDIDDADRFGLEV----RERAGDL 282 Query: 304 V 304 + Sbjct: 283 I 283 >gi|327398182|ref|YP_004339051.1| porphobilinogen deaminase [Hippea maritima DSM 10411] gi|327180811|gb|AEA32992.1| porphobilinogen deaminase [Hippea maritima DSM 10411] Length = 299 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 89/280 (31%), Positives = 139/280 (49%), Gaps = 14/280 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 +K +IGTR S LAL A + L D I+P+ T GD+ T++ L ++GGKG Sbjct: 5 RKQLKIGTRGSKLALWQAEFAKKRLEDK----GFECEIVPIKTSGDK-TDKPLYQLGGKG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIEK L+ ID AVHS KDM + + D + + ++ Sbjct: 60 LFIKEIEKALLDKTIDIAVHSLKDMSVFEDERFDF--IVFERDYWEDIFVSFEGNFLEIK 117 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ +GTSSLRR+A LL++R D +D RG ++TRL KL + + AI+++ +G+KRL Sbjct: 118 KNARVGTSSLRRRAELLQYRDDFEFVDLRGNLDTRLKKLRDGEVDAIVVSKSGLKRLGLY 177 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + ++ P+ GQG I +E + EL K + E T ++ ERAF+ + + Sbjct: 178 DEAY-MYDLRFATPAAGQGVIAVEFLSDFEFRDEL-KQLEDEKTRICIDSERAFVRQFNA 235 Query: 243 SCKSAIAGFAYCKGSTLYFY---GIVLASDGKIFHEVSRN 279 SC I A + + G V + + SR Sbjct: 236 SCNYPIGALARFEQDEFFMQITYGFVDNL--RRVIKYSRR 273 >gi|294637953|ref|ZP_06716220.1| hydroxymethylbilane synthase [Edwardsiella tarda ATCC 23685] gi|291088885|gb|EFE21446.1| hydroxymethylbilane synthase [Edwardsiella tarda ATCC 23685] Length = 230 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 89/206 (43%), Positives = 120/206 (58%), Gaps = 2/206 (0%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++ RI TR SPLAL A R L + P I ++P+ T+GD + + L ++GGKG Sbjct: 19 QQTLRIATRQSPLALWQAHYVRDQL--LTHWPQLTIELVPMVTRGDVLLDTPLAKVGGKG 76 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +E+E L+ G D AVHS KD+P GL + PRED RD F+S SL L Sbjct: 77 LFVKELELALLEGRADIAVHSMKDVPVAFPDGLGLVTICPREDPRDAFVSPHFASLDQLP 136 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S++GTSSLRR+ L R D+ + D RG + TRL KL+ + AI+LA AG+KRL+ E Sbjct: 137 PGSIVGTSSLRRQCQLRAARPDLQIRDLRGNVGTRLAKLDAGEYDAIILAAAGLKRLQLE 196 Query: 183 KVIKEILNIEDFPPSPGQGAICIETH 208 I+ L E P+ GQGA+ IE Sbjct: 197 ARIRTPLTAEQSLPAVGQGAVGIECR 222 >gi|302325361|gb|ADL24562.1| hydroxymethylbilane synthase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 351 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 94/346 (27%), Positives = 150/346 (43%), Gaps = 55/346 (15%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPP-----------HNIVIIPLSTKGDR 49 M RI TR S LALA +++ + + ++ ++T+GDR Sbjct: 1 MSDLKLRIATRKSALALAQTTMVADAIVAANSVIGNAADSNNARDSLTYELVSMTTEGDR 60 Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109 +++L GGKG+F +E+E L+ G D A+HS KDMP ++L +++A L RED RD Sbjct: 61 RLDKSLASFGGKGVFIKELEIALLEGRADIAIHSLKDMPAEVLPQFKLAAVLKREDPRDA 120 Query: 110 FISHTAQ---SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA 166 F+S DL + +GT S+RR L R D+ + RG I+TR+ KL + Sbjct: 121 FLSRGGSAGIRFMDLPAGARVGTGSIRRVVQLKALRPDLEYVPIRGNIQTRIGKL--AEL 178 Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVN----------NPKAQE 216 ++LA AG+KR+ + E + E P+ GQG + IET + + Sbjct: 179 DGVVLAAAGLKRMGLADQVTEYFSTEQMLPASGQGILAIETLNDATVQESRVTGRADLAQ 238 Query: 217 LVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY--CKGS----------------- 257 ++ +N T+ + E A+L L+ C+ +A FA C+ Sbjct: 239 ILARVNDVATYCIASAEMAYLKALNAGCQFPVASFAEFVCEDGIENRGTCGALEENANRI 298 Query: 258 --TLYFYGIVLASDGKIFHEVSRNGNRC--------DAINIGRDAA 293 TL GI + GN + N+G + A Sbjct: 299 AQTLKIRGIYWDEKSEKLLRAEVAGNVDLNSEDCVQQSKNLGIELA 344 >gi|225561829|gb|EEH10109.1| porphobilinogen deaminase [Ajellomyces capsulatus G186AR] Length = 345 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 145/319 (45%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K F IGTR S LAL R +L P + I+ D L E K Sbjct: 17 TKTTFTIGTRKSKLALVQTDLVRDALKAA--WPQYEFDILTKDAAADLDKVTPLREFTSK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119 L+TEE+E+ L++ +ID VHS KD+PT++ + A +PRED RDV + Sbjct: 75 NLWTEELEELLLAKQIDLVVHSLKDVPTQIPTTCILGAMMPREDPRDVLVIKKGLPNMTL 134 Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 +L S++GTSS+RR A L R + D RG I+TRL KL+ + A++LA AG+ Sbjct: 135 AELPAGSIVGTSSVRRIAQLSRHYPHLIAKDVRGNIDTRLTKLDAQDGPFSALILAAAGL 194 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R + I L+ +D + GQG + IE N+ + +E+V+ I T + ER Sbjct: 195 LRTGQGARISHYLDSKDGKMLHAVGQGGLGIEIRANDERMKEMVEKIGDRKTTFACLAER 254 Query: 235 AFLAELDGSCKSAIAGFAYCK-----GSTLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 L L+G C + + TL IV + DGK E+ + +A Sbjct: 255 NLLRTLEGGCSAPLGVETEWVQGAEGKETLMLRAIVSSVDGKEAVEIEKVEKVTSGEEAE 314 Query: 287 NIGRDAAQYIRFISNKNVF 305 G+ A + + + Sbjct: 315 VFGKKVADELVVLGAGRIL 333 >gi|325102976|ref|YP_004272630.1| porphobilinogen deaminase [Pedobacter saltans DSM 12145] gi|324971824|gb|ADY50808.1| porphobilinogen deaminase [Pedobacter saltans DSM 12145] Length = 532 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 84/264 (31%), Positives = 132/264 (50%), Gaps = 12/264 (4%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + F+IGTR S LAL A S L + + I + T+GD I N L ++ GK Sbjct: 1 MDRIFKIGTRGSDLALWQANHVASKLNEA----GYQTEIKIIKTQGDNILNLRLDKLEGK 56 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI----SHTAQS 117 G FT+E+E+ L++G+ID AVHS KD+PT+ GL ISA RED +V + Sbjct: 57 GFFTKELEEHLLAGDIDLAVHSHKDLPTENPPGLFISAVSEREDPSEVLLILKDCVDTSK 116 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 + + ++GTSS RR++ + R D+ D RG + TR+ KL + AI+LA AG+ Sbjct: 117 KLSVKHNGLVGTSSNRRQSQISSVRPDLEFEDLRGNVNTRIQKLRDENYDAIVLAKAGVS 176 Query: 178 RLKKEKVIKEILNIE---DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSV-NCE 233 RL + I IE + P+P QG + ++ + + ++K + H + + E Sbjct: 177 RLNLDLSEFYIETIEPVAEMIPAPAQGVLAVQIREGDSELDAVLKEVIHNQEVANCISVE 236 Query: 234 RAFLAELDGSCKSAIAGFAYCKGS 257 R L +G C + + + Sbjct: 237 RKVLNLFNGGCHMPLGSYCKKEDD 260 >gi|291615715|ref|YP_003518457.1| HemC [Pantoea ananatis LMG 20103] gi|291150745|gb|ADD75329.1| HemC [Pantoea ananatis LMG 20103] Length = 244 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 81/234 (34%), Positives = 124/234 (52%) Query: 72 LISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSS 131 ++ D AVHS KD+P +GL + R+D RD F+S+ S+ +L +VIGTSS Sbjct: 1 MLENRADLAVHSMKDVPVAFPEGLGLVTICQRDDPRDAFVSNHYASIDELPQGAVIGTSS 60 Query: 132 LRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNI 191 LRR+ + R D+ + RG + TRL+KL+ + AI+LA AG+ RL I++ L Sbjct: 61 LRRQCQISARRPDLVIRSLRGNVGTRLSKLDAGEYDAIILAAAGLNRLGLADRIRQPLPA 120 Query: 192 EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGF 251 + P+ GQGA+ IE +++ L++ +NH+DT V ERA L+G C+ I F Sbjct: 121 DISLPAVGQGAVGIECRLDDSTLIALLQALNHDDTAVCVKAERAMNTRLEGGCQVPIGSF 180 Query: 252 AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 A +G L+ G+V A DG + R G R A +G A + + + Sbjct: 181 AVLEGDELWLRGLVGAPDGSVMVSGERRGPRDQAEQMGISLADELLNGGAREIL 234 >gi|331699360|ref|YP_004335599.1| Porphobilinogen deaminase [Pseudonocardia dioxanivorans CB1190] gi|326954049|gb|AEA27746.1| Porphobilinogen deaminase [Pseudonocardia dioxanivorans CB1190] Length = 327 Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 88/297 (29%), Positives = 138/297 (46%), Gaps = 22/297 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+A + + L H + ++P+ST GDR + + E+G G+F Sbjct: 5 LRIGTRPSALAMAQSGQIADRLRAA----GHTVELVPVSTVGDR-SGAPVAELG-VGVFV 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + + SGE+D A+HS KD+PT L + A RED RD ++ + L +L S Sbjct: 59 SAVRDAVASGEVDVAIHSYKDLPTAPDPRLTLVAVPGREDPRDALVARDGKVLGELPAGS 118 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT S RR A L + V+ RG ++TR+ K+ + + +++A AG++RL + Sbjct: 119 RVGTGSARRTAQLQALGLGLEVVPIRGNVDTRIGKVTSGELDGVIVAAAGLRRLGRIGEA 178 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQEL------VKVINHEDTWDSVNCERAFLAE 239 E+L P+P QGA+ +E P + E +++ +V ERA LA Sbjct: 179 TELLEPVQMLPAPAQGALAVECRAGVPGSTEHGLALALTALLDDPAARAAVTAERAVLAS 238 Query: 240 LDGSCKSAIAGFAYCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 L+ C + I A L +V +DG S G+ DA Sbjct: 239 LEAGCTAPIGALADVVSDLDDAGRVVDRLSLRAVVGTADGA-LLRASVTGDIDDAEK 294 >gi|154283391|ref|XP_001542491.1| porphobilinogen deaminase [Ajellomyces capsulatus NAm1] gi|150410671|gb|EDN06059.1| porphobilinogen deaminase [Ajellomyces capsulatus NAm1] Length = 345 Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 98/319 (30%), Positives = 146/319 (45%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K F IGTR S LAL R +L P + I+ D L E K Sbjct: 17 TKTTFTIGTRKSKLALVQTDLVRDALKAA--WPQYEFDILTKDAAADLDKVTPLREFTSK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119 L+TEE+E+ L++ +ID VHS KD+PT++ K + A +PRED RDV + Sbjct: 75 NLWTEELEELLLAKQIDLVVHSLKDVPTQIPKTCILGAMMPREDPRDVLVIKKGLPNMTL 134 Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 +L S++GTSS+RR A L R + D RG I+TRL KL+ + A++LA AG+ Sbjct: 135 AELPAGSIVGTSSVRRIAQLSRHYPHLIAKDVRGNIDTRLAKLDAQDGPFSALILAAAGL 194 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R + I L+ +D + GQG + IE N+ + +E+V+ I T + ER Sbjct: 195 LRTGQGARISHYLDSKDGKMLHAVGQGGLGIEIRANDERMKEMVEKIGDRKTTFACLAER 254 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 L L+G C + + TL IV + DGK E+ + +A Sbjct: 255 NLLRTLEGGCSAPLGVETEWVQDADGKETLMLRAIVSSVDGKEAVEIEKYEKVTSGEEAE 314 Query: 287 NIGRDAAQYIRFISNKNVF 305 G+ A + + + Sbjct: 315 VFGKKVADELVVLGAGRIL 333 >gi|239980250|ref|ZP_04702774.1| porphobilinogen deaminase [Streptomyces albus J1074] Length = 307 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 80/305 (26%), Positives = 143/305 (46%), Gaps = 21/305 (6%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 +A + + ++ + P + ++ ++T GD L +IGG G+F + + L+ GE Sbjct: 1 MAQSGQVADAVHQLTGRP---VELVEITTYGDTSR-EHLAQIGGTGVFVAALREALVRGE 56 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 +D AVHS KD+PT L ++A PRED RDV I+ ++L + +GT S RR A Sbjct: 57 VDFAVHSLKDLPTAQPDELVLAAVPPREDPRDVLIARDGLRFEELPEGARVGTGSPRRMA 116 Query: 137 LLLRWRSDISV----IDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192 L + + + RG I+TR+ + + + A++LA AG+ R+ + + E L+++ Sbjct: 117 QLNAYARGHRMAVETVPIRGNIDTRIGFVRSGELDAVVLAAAGLHRVGRSDEVTEYLSVD 176 Query: 193 DFPPSPGQGAICIETHVNNPKAQELVKVI----NHEDTWDSVNCERAFLAELDGSCKSAI 248 P+PGQGA+ IE + + + + T +V ER+ LA L+ C + + Sbjct: 177 TILPAPGQGALAIECAAGHEADGLPLAAVLAELDDPATRAAVTAERSLLAALEAGCSAPV 236 Query: 249 AGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGRDAAQYIRFI 299 A + G+V + DG ++S G +A +G + A + Sbjct: 237 GALADLLADGQVVKEMRLRGVVGSPDGSALVQLSTTGPVPTTHDEAAALGTELAAEMLAK 296 Query: 300 SNKNV 304 + Sbjct: 297 GAAGL 301 >gi|154508275|ref|ZP_02043917.1| hypothetical protein ACTODO_00771 [Actinomyces odontolyticus ATCC 17982] gi|153797909|gb|EDN80329.1| hypothetical protein ACTODO_00771 [Actinomyces odontolyticus ATCC 17982] Length = 344 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 94/334 (28%), Positives = 154/334 (46%), Gaps = 29/334 (8%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNI--VIIPLSTKGDRITNRTLTEI 58 M + F +GTR S LALA + ++ + + + + T GD ++ L + Sbjct: 1 MTTRTFVLGTRGSRLALAQSTTVARAIEEAGARLGEEVRVNLEVVRTHGD-VSAAPLAAL 59 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GG G+F ++ L+ GE D AVHS KD+PT GL+I+A RED RD + +L Sbjct: 60 GGVGVFAAQLRLALLGGECDLAVHSFKDLPTAPTPGLRIAAVPQREDPRDALCAADGATL 119 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN---------------- 162 L +++GT S RR A +L R D+ V D RG + TRL+++ Sbjct: 120 ASLPEGALVGTGSPRRAAQVLAARPDLFVCDLRGNVPTRLSRVRGLDLGADAGTAPSALG 179 Query: 163 -NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK-AQELVKV 220 + A++LA AG++R+ + ++L+ P+ QGA+ IET + + L+ Sbjct: 180 TGERLDAVVLALAGLRRIGLDAHATDVLDPAIMMPAASQGALAIETRDEDDPLLRALLGT 239 Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSR 278 +NH T + + ERA L+ L C + + FA S L V++ DG+ E S Sbjct: 240 LNHRPTALAASAERAVLSALGAGCAAPVGAFARVDEASSVLLLDARVMSVDGRERVEASG 299 Query: 279 NGN------RCDAINIGRDAAQYIRFISNKNVFN 306 + +A +G D + + V + Sbjct: 300 SLALTDSVGLDEAARLGEDVVRQLLAGGAAEVTD 333 >gi|150398808|ref|YP_001322575.1| porphobilinogen deaminase [Methanococcus vannielii SB] gi|150011511|gb|ABR53963.1| porphobilinogen deaminase [Methanococcus vannielii SB] Length = 304 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 86/311 (27%), Positives = 145/311 (46%), Gaps = 18/311 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA+ S L ++ II + T GD+ N+ L ++G G+F Sbjct: 2 KLRIGTRGSKLAMIQTKYIASLLNEL----GVETEIIIIKTTGDKDQNKKLADLGI-GVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E++ K++ EID AVHS KD+PT LQI+A RE D+ + + + Sbjct: 57 TKELDNKMLENEIDIAVHSLKDVPTLWSDELQITATPKRESPDDLILWNKNSNFNIEYDE 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 ++GTSS+RR A L ++ V RG + TR++KL NN+ I++A AG+ R + Sbjct: 117 LIVGTSSIRRTAFLELSNPNLKVKLLRGNVATRIDKLRNNEYDGIIMAKAGLIRQGIDLS 176 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 +E P+P QG I + + + + E+++ IN + T+ ER L E G C Sbjct: 177 DFNYEKLEIL-PAPAQGVIGVASRKKDYEINEILEKINDKKTYLEAVAERWSLKEYGGGC 235 Query: 245 KSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNG-------NRCDAINIGRDAAQY 295 ++ FA+ L ++ +S+ G + + ++G+ Sbjct: 236 QAPFGAFAFYDFDEGILTLKCDLVKEIHGKKISISKEGFVYCNVNDVELSKDLGKRVGLS 295 Query: 296 IRFISNKNVFN 306 + ++F Sbjct: 296 FKE---SDIFE 303 >gi|300741887|ref|ZP_07071908.1| hydroxymethylbilane synthase [Rothia dentocariosa M567] gi|300381072|gb|EFJ77634.1| hydroxymethylbilane synthase [Rothia dentocariosa M567] Length = 371 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 95/367 (25%), Positives = 146/367 (39%), Gaps = 65/367 (17%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSL--------MDVHKIPPHNIVIIPLSTKGDRITN 52 M P+ +GTR S LAL + + + + I + T GD + Sbjct: 1 MSD-PYILGTRGSALALTQSTLAAEHIVQVFNAHSREHGAERTLSFDITTVKTDGD-VLT 58 Query: 53 RTLTEIGGKGLFTEEIEKKLISGEI----DCAVHSAKDMPTKLLKGLQISAYLPREDIRD 108 L +GG G+F + ++L+ G+ D AVHS KD+P + GL I+A L RED RD Sbjct: 59 GPLATLGGTGVFAAALRQRLLDGDTPGGVDVAVHSLKDLPAEPCPGLVIAAILEREDPRD 118 Query: 109 VFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL------- 161 ++ +L L + +GT S RR A + R D+ ++D RG + TR+ ++ Sbjct: 119 ALVARDNLTLDTLPTGARVGTGSPRRAAQVRALRPDLEIVDIRGNVGTRIARVKGLEEHG 178 Query: 162 -----------------------NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSP 198 N A++LA +G+KRL KE VI E L+ P+P Sbjct: 179 NRQVVVRDSTETDEAAHRGIGTENTGDCDAVILAVSGLKRLGKESVITEYLDPSRMLPAP 238 Query: 199 GQGAICIETHVNNPKAQELVK------------------VINHEDTWDSVNCERAFLAEL 240 GQGA+ IE + +H +T V ER L L Sbjct: 239 GQGALAIEVRETEFVNPDTATLFDPEISQPVRTLGEALIAADHFETHLEVTAERRLLRRL 298 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE-VSRNGNRC--DAINIGRDAAQYIR 297 + C + I +A K L +V + DG S G A +G A+ + Sbjct: 299 EAGCAAPIGAYATVKDGDLVLTAVVASPDGTESLRHTSATGELDVPGAERLGIRVAEDLL 358 Query: 298 FISNKNV 304 + + Sbjct: 359 QMGAAAL 365 >gi|169614115|ref|XP_001800474.1| hypothetical protein SNOG_10192 [Phaeosphaeria nodorum SN15] gi|111061407|gb|EAT82527.1| hypothetical protein SNOG_10192 [Phaeosphaeria nodorum SN15] Length = 397 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 101/346 (29%), Positives = 148/346 (42%), Gaps = 47/346 (13%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG---- 60 P IGTR S LA A ++L H P I P+ +GDR L ++ Sbjct: 30 PVNIGTRNSTLAQIQARAVAAALKSAH--PERTYNICPVVVEGDRDKITPLQQLSQGENA 87 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFIS----HTAQ 116 K L+T E+E L G++D VH KDMPT+L L++ A L RED RD + Sbjct: 88 KSLWTGELETMLEKGDLDIIVHCLKDMPTQLPDNLELGAILEREDPRDALLISPRLPGDT 147 Query: 117 SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN--KAHAILLAYA 174 +L L + IGTSS+RR A L R + D RG + TRL KL+ AI+LA A Sbjct: 148 TLATLPQGATIGTSSVRRAAQLRRLYPHLQFADLRGNVGTRLGKLDKEDSPYSAIILAAA 207 Query: 175 GIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 G++R+ E I + L+ + GQGA+ IE ++ + L+ I E T + + Sbjct: 208 GLRRMGLESRITQYLDSATGGMLHAVGQGALAIEIRKDDETMKALLNKIACERTTRACSA 267 Query: 233 ERAFLAELDGSCKSAIAGFAYC------------------------------KGSTLYFY 262 ERA L L+G C I L Sbjct: 268 ERALLRALEGGCSVPIGIETSWRGGKGLAVGAQPAKDYDKHGNAVEEAEPDLDDQELVMK 327 Query: 263 GIVLASDGKIFHE---VSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 +V++ DGK E V + ++ +A +GR+ A+ + + Sbjct: 328 TMVVSVDGKDAVEHDAVRKVRSKEEAEEMGREVAKILIEKGADQIL 373 >gi|45358435|ref|NP_987992.1| porphobilinogen deaminase [Methanococcus maripaludis S2] gi|44921193|emb|CAF30428.1| Porphobilinogen deaminase [Methanococcus maripaludis S2] Length = 304 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 84/303 (27%), Positives = 134/303 (44%), Gaps = 15/303 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA+ L D+ II + T GD+ N+ L ++G G+F Sbjct: 2 KLRIGTRGSTLAMVQTEYIAGLLNDL----DIETEIIIVKTTGDKDQNKKLADLGI-GVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E++ K++ EID AVHS KD+PT LQI+A RE D+ I Sbjct: 57 TKELDNKMLENEIDIAVHSLKDVPTLWSDELQITATPKRESPDDIIIWRKDCDFDIEHDE 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +GTSS+RR + L +++ RG + TR+NKL N + I++A AG+ R + Sbjct: 117 LNVGTSSIRRTSFLQFTNPNLTPKLLRGNVATRINKLRNGEYDTIVMAKAGLIRQGIDLS 176 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ P+P QG I + + + K ++++ I + T+ ER L E G C Sbjct: 177 EFNYKKLDIL-PAPAQGVIGVASRKADAKINQILEKICDKKTYIEATAERWALKEYGGGC 235 Query: 245 KSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNG-------NRCDAINIGRDAAQY 295 ++ FA + L ++ G I S G + + +G Sbjct: 236 QAPFGAFAIYDTEEGILNLRCELVDEQGTIKRVKSNEGFVICTTDDVELSKELGARVGAS 295 Query: 296 IRF 298 + Sbjct: 296 FKE 298 >gi|313901219|ref|ZP_07834707.1| hydroxymethylbilane synthase [Clostridium sp. HGF2] gi|312954177|gb|EFR35857.1| hydroxymethylbilane synthase [Clostridium sp. HGF2] Length = 299 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 107/277 (38%), Positives = 153/277 (55%), Gaps = 2/277 (0%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+GTR S LALA E ++ L + P H+ I ++TKGDRI + L ++ KG+F Sbjct: 3 IRMGTRGSALALAQCNEVKALLEKAY--PQHSFEICVITTKGDRIQHVALDQMKDKGIFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE++L+ ID AVHS KDMP+ L + L + L RED RDV + A SL+ L LH+ Sbjct: 61 KEIEQQLLEHTIDLAVHSMKDMPSVLDERLCFTETLLREDARDVLVLRNAASLESLPLHA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 I T S RR+ LLR R D+ ++ RG IETRL KL + + I+LA AG+KRL+ + I Sbjct: 121 RIATGSKRRRFQLLRQREDLEIVGIRGNIETRLKKLEDQQLDGIVLAAAGLKRLQLAQYI 180 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + L P+ QGAI IE H ELV + + + V ERAFL EL+G C Sbjct: 181 TQTLPEHIMVPAVAQGAIAIEVHKKRNDLVELVNALCTKRVDEEVCAERAFLQELNGGCH 240 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 + + + + + + DG ++ +G R Sbjct: 241 TPLGARCILHEADAELFAVYGSEDGTRLFDLHVSGPR 277 >gi|269958021|ref|YP_003327810.1| porphobilinogen deaminase [Xylanimonas cellulosilytica DSM 15894] gi|269306702|gb|ACZ32252.1| porphobilinogen deaminase [Xylanimonas cellulosilytica DSM 15894] Length = 343 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 88/313 (28%), Positives = 141/313 (45%), Gaps = 18/313 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+GTR S LA + L ++ P + ++ + T GD + +L +GG G+F Sbjct: 7 PLRLGTRASLLATTQSGLVAKRLEELTGRP---VELVHIRTDGD-VLTGSLASLGGTGVF 62 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L+ D AVHS KD+PT ++GL RED RD + +L L Sbjct: 63 VAALREALLDDRCDVAVHSLKDLPTAAVEGLTFVT-PEREDPRDALCARDGLTLDTLPRG 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--NNNKAHAILLAYAGIKRLKKE 182 + IGT S RR A L R D+ V+D RG ++TRL + + A++LA +G+ RL + Sbjct: 122 ARIGTGSPRRAAQLRAARPDLDVVDIRGNVDTRLKRALGPDADLDAVVLACSGLARLGRT 181 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ----ELVKVINHEDTWDSVNCERAFLA 238 + + L+ P+PGQGA+ +E + ++H T SV ERA LA Sbjct: 182 DTVTQALDPAVVAPAPGQGALAVEARTTDLAPGGPLAAAFAALDHRATRLSVTAERAVLA 241 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS-------RNGNRCDAINIGRD 291 L+ C + + A L +V DG +G+ A ++G Sbjct: 242 RLEAGCAAPVGALARVDEGQLTLTAVVARVDGTEKLRHRASVALGAISGDDDAARDLGVR 301 Query: 292 AAQYIRFISNKNV 304 A+ + ++ Sbjct: 302 VAEALLADGAADL 314 >gi|225684419|gb|EEH22703.1| porphobilinogen deaminase [Paracoccidioides brasiliensis Pb03] Length = 347 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 94/313 (30%), Positives = 141/313 (45%), Gaps = 19/313 (6%) Query: 11 RCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEK 70 R S LAL RSSL P + + T GD L E K L+TEE+E+ Sbjct: 26 RKSKLALLQTDLIRSSLKAA--WPEYEFRVHSQDTAGDLNKVTPLREFTTKNLWTEELEE 83 Query: 71 KLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK---DLALHSVI 127 L++ +ID VHS KD+PT+L K + A +PRED RDV + +L SV+ Sbjct: 84 LLVAKKIDFVVHSLKDVPTQLPKPCALGAVVPREDPRDVLVIKKGLPKMTLAELPAGSVV 143 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVI 185 GTSS+RR A L R + D RG IETRL KL+ + I+LA AG+ R + I Sbjct: 144 GTSSVRRIAQLSRHYPHLKPQDIRGNIETRLAKLDAEDGPFTCIILAAAGLLRTGQGARI 203 Query: 186 KEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 L+ ++ + GQGA+ +E ++ + + +++ I + ER+ L L+G Sbjct: 204 SHFLDSKNGKMLHAVGQGALGVEIRADDERMRAMIEKIGDRRATFACLAERSLLRTLEGG 263 Query: 244 CKSAIAGFAYCKGST-------LYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAA 293 C + + L IV + DGK EV + +A G+ A Sbjct: 264 CSAPLGVETEWVKGEGQGEVEKLRLRAIVASVDGKEAVEVEMEAEIRSEAEAEGFGKTVA 323 Query: 294 QYIRFISNKNVFN 306 + + + Sbjct: 324 EELIVKGAGKILE 336 >gi|145525120|ref|XP_001448382.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124415926|emb|CAK80985.1| unnamed protein product [Paramecium tetraurelia] Length = 306 Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats. Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 15/310 (4%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTK-GDRITNRTLTEIGG 60 ++ RI TR S LA+A S L II +S + GD L ++ Sbjct: 1 MQRQLRIATRSSALAMAQTNYVISELKQ-------ECEIIKVSNEVGDVNLQDPLYQMPT 53 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQS 117 G+FT+++E+ L+ + D AVHS KD+PT + L ++AY E DV + + +S Sbjct: 54 VGVFTKQVEQYLLEQKADVAVHSLKDLPTIIDAQLHLAAYTKFEQRGDVVLLNKKYNYKS 113 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L +L +GTSSLRR A + +++I+ RG + TR+ KL+ + AI+LA AGI Sbjct: 114 LSELPDGLKVGTSSLRRIATIRSRYPKLNLINIRGNLNTRIQKLDEGQYDAIILAKAGIL 173 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 RL + I L+ ++F +P Q A+ I+ ++ + ++++N D ER FL Sbjct: 174 RLGLAEKISFDLDEKEFLYAPAQAALGIQCRKDDLETIGRLQILNDTDAQKRCVAERMFL 233 Query: 238 AELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L+G C+ IA ++ C + +Y G VLA DG E +G+ + I Sbjct: 234 NLLEGGCRLPIAVYSECREDGQVYIKGRVLAVDGSKVIEDEA---LDHFEIVGQILCEKI 290 Query: 297 RFISNKNVFN 306 + + + Sbjct: 291 KVLGGVELIE 300 >gi|58699644|ref|ZP_00374329.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila ananassae] gi|58533839|gb|EAL58153.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila ananassae] Length = 267 Score = 182 bits (461), Expect = 7e-44, Method: Composition-based stats. Identities = 104/263 (39%), Positives = 148/263 (56%), Gaps = 6/263 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +IGTR S LA+ A E + L+D P +I I+ + T GD+ N L EIGGKGLF Sbjct: 3 VKIGTRGSKLAVVQALEAKQKLLD--SFPNLSIEIVKIKTSGDKYANANLAEIGGKGLFI 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE +L+ ID AVHS KD+P GL I L R D FISH SL+ L + Sbjct: 61 KEIEAELLENNIDMAVHSLKDVPAFFSWGLTIPCVLERLSPCDAFISHKHNSLESLPQQA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 I TS++RRK LL +R D++++ RG + TR L N I+LA AG+ RL+K +I Sbjct: 121 TIATSAIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLEKHHLI 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+L + + GQGAICI+ N+ K +L++ IN+ ++ V ER+F+ ++GSC Sbjct: 178 TEVLPPKVMLSAVGQGAICIQCRRNDVKIIDLLEKINNNMSFIGVKSERSFMKTVNGSCF 237 Query: 246 SAIAGFAY-CKGSTLYFYGIVLA 267 + +A A + LY V Sbjct: 238 TPLAALAEYVSENMLYLSLYVGR 260 >gi|67989478|ref|NP_001018179.1| hydroxymethylbilane synthase [Schizosaccharomyces pombe 972h-] gi|12644400|sp|Q09899|HEM3_SCHPO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|5834802|emb|CAB55280.1| hydroxymethylbilane synthase [Schizosaccharomyces pombe] Length = 336 Score = 182 bits (461), Expect = 7e-44, Method: Composition-based stats. Identities = 88/315 (27%), Positives = 146/315 (46%), Gaps = 18/315 (5%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG---KGLF 64 IGTR S LA+ + R L + P II T GD I ++ L E K L+ Sbjct: 9 IGTRKSKLAVIQSEIIREELEKHY--PHLEFPIISRDTIGDEILSKALFEFKRQLAKSLW 66 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T E+E L++ + VHS KD+P+++ G+ I+ R D + +++ DL Sbjct: 67 TRELEALLVTNQCRILVHSLKDLPSEMPDGMVIACIPKRSCPLDAIVFKAGSHYKTVADL 126 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRL 179 SV+GTSS+RR+ALL R + +D RG + TRL KL+ +++ ++LA AG+ RL Sbjct: 127 PPGSVVGTSSIRRRALLARNFPHLRFVDIRGNVGTRLAKLDAPDSQFDCLVLAAAGLFRL 186 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I ++L + GQGA+ +E ++ + E++K + H++T + ERA + Sbjct: 187 GLKDRIAQMLTAPFVYYAVGQGALAVEVRADDKEMIEMLKPLQHQETLYACLAERALMKR 246 Query: 240 LDGSCKSAIAGFAYC-----KGSTLYFYGIVLASDGKIFHEVS---RNGNRCDAINIGRD 291 L G C I + G VL++DG + + +A +G Sbjct: 247 LQGGCAIPIGVQTDVLAISNSSYRISLLGTVLSADGLRAAFGNAEAVVSSEEEAEELGIT 306 Query: 292 AAQYIRFISNKNVFN 306 A + + Sbjct: 307 VALALLKNGAGPILE 321 >gi|260905127|ref|ZP_05913449.1| glutamyl-tRNA reductase [Brevibacterium linens BL2] Length = 825 Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats. Identities = 94/336 (27%), Positives = 151/336 (44%), Gaps = 40/336 (11%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + R+GTR S LA + + L + + I+ + T+GD + LT GG Sbjct: 475 SGRTIRLGTRRSKLARSQSTAIAHQLAALTGW---RVEIVEVVTEGDVNMS-PLTGFGGT 530 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F + + L G+ID AVHS KD+PT G+Q++A PR D DV I S +L Sbjct: 531 GVFVSAVRQALHQGKIDIAVHSLKDLPTTPEAGIQMAAIPPRVDPADVLIGRDGLSFAEL 590 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SV+GT S RR L R DI V RG ++TR+ + + + A++LA AG++R+ + Sbjct: 591 PAGSVVGTGSPRRAVQLRAARPDIEVRGVRGNVDTRIAHVRDGRLDAVVLAAAGVRRIGR 650 Query: 182 EKVIKEILNIEDFPPSPGQGAICIET-------------HVNNPKAQELVKVINHEDTWD 228 + L+ + P+PGQGA+ +ET + + + +K ++ E T Sbjct: 651 LAEATDSLDFDTMLPAPGQGALAVETRGADSPFALDNEVMEADAEVRTQLKRLHDETTDL 710 Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR---------- 278 +V CERA L+ + C + I A +GS ++ DGK+ Sbjct: 711 AVTCERAILSRAEAGCSAPIGALATIQGSDFVVDAVMADDDGKLARTRQVAPLPTTPDVD 770 Query: 279 --NGNRCD-----------AINIGRDAAQYIRFISN 301 +G+ A +G AA+ + Sbjct: 771 LDSGSANQLSITGKELARLADELGTAAAEDLLGQLG 806 >gi|50841792|ref|YP_055019.1| porphobilinogen deaminase [Propionibacterium acnes KPA171202] gi|289424694|ref|ZP_06426477.1| hydroxymethylbilane synthase [Propionibacterium acnes SK187] gi|289428901|ref|ZP_06430581.1| hydroxymethylbilane synthase [Propionibacterium acnes J165] gi|295129869|ref|YP_003580532.1| hydroxymethylbilane synthase [Propionibacterium acnes SK137] gi|50839394|gb|AAT82061.1| porphobilinogen deaminase, HemC [Propionibacterium acnes KPA171202] gi|289155391|gb|EFD04073.1| hydroxymethylbilane synthase [Propionibacterium acnes SK187] gi|289157902|gb|EFD06125.1| hydroxymethylbilane synthase [Propionibacterium acnes J165] gi|291376805|gb|ADE00660.1| hydroxymethylbilane synthase [Propionibacterium acnes SK137] Length = 366 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 93/333 (27%), Positives = 142/333 (42%), Gaps = 34/333 (10%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M R+GTR S LA + L ++ + ++T GD + +L +GG Sbjct: 33 MS--AIRLGTRASTLATTQSEMVAGLLRS----EGLDVNLTTITTHGDT-STASLAAMGG 85 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F I L+ GE D AVHS KD+PT GL I A R D RD ++ +L D Sbjct: 86 IGVFASAIRAALLEGEADIAVHSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHD 145 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------NNKAHAIL 170 L + +GT S RR A LL R D++++D RG ++TRL ++ A++ Sbjct: 146 LPQEASVGTGSPRRAAQLLAVRPDLTIVDIRGNVDTRLGRVKGLGRYAKNGGKEDLDAVV 205 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV---KVINHEDTW 227 LA +G+ RL + E L+ P+P QGA+ +E + + +L I+ T Sbjct: 206 LAASGLARLGHSGAVTEFLDPSVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTR 265 Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKG------STLYFYGIVLASDGKIFHE------ 275 + ERA L+ L+ C + I A K L +V A DG Sbjct: 266 LAATAERAVLSHLEAGCAAPIGALAQLKPVSGKSLQVLTLDVVVAAVDGSRTVREQVSVE 325 Query: 276 --VSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 A +G AA+ + +V + Sbjct: 326 LPAEVEPALAAAHTLGVTAAEELLDDGAADVAD 358 >gi|55976374|sp|Q6AB05|HEM3_PROAC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|313772844|gb|EFS38810.1| porphobilinogen deaminase [Propionibacterium acnes HL074PA1] gi|313802779|gb|EFS43997.1| porphobilinogen deaminase [Propionibacterium acnes HL110PA2] gi|313806434|gb|EFS44941.1| porphobilinogen deaminase [Propionibacterium acnes HL087PA2] gi|313810983|gb|EFS48697.1| porphobilinogen deaminase [Propionibacterium acnes HL083PA1] gi|313815286|gb|EFS53000.1| porphobilinogen deaminase [Propionibacterium acnes HL059PA1] gi|313817301|gb|EFS55015.1| porphobilinogen deaminase [Propionibacterium acnes HL046PA2] gi|313824153|gb|EFS61867.1| porphobilinogen deaminase [Propionibacterium acnes HL036PA2] gi|313826520|gb|EFS64234.1| porphobilinogen deaminase [Propionibacterium acnes HL063PA1] gi|313828701|gb|EFS66415.1| porphobilinogen deaminase [Propionibacterium acnes HL063PA2] gi|313831749|gb|EFS69463.1| porphobilinogen deaminase [Propionibacterium acnes HL007PA1] gi|313840063|gb|EFS77777.1| porphobilinogen deaminase [Propionibacterium acnes HL086PA1] gi|314916105|gb|EFS79936.1| porphobilinogen deaminase [Propionibacterium acnes HL005PA4] gi|314917026|gb|EFS80857.1| porphobilinogen deaminase [Propionibacterium acnes HL050PA1] gi|314921302|gb|EFS85133.1| porphobilinogen deaminase [Propionibacterium acnes HL050PA3] gi|314955012|gb|EFS99418.1| porphobilinogen deaminase [Propionibacterium acnes HL027PA1] gi|314959051|gb|EFT03153.1| porphobilinogen deaminase [Propionibacterium acnes HL002PA1] gi|314961324|gb|EFT05425.1| porphobilinogen deaminase [Propionibacterium acnes HL002PA2] gi|314977093|gb|EFT21188.1| porphobilinogen deaminase [Propionibacterium acnes HL045PA1] gi|314989126|gb|EFT33217.1| porphobilinogen deaminase [Propionibacterium acnes HL005PA3] gi|315078439|gb|EFT50470.1| porphobilinogen deaminase [Propionibacterium acnes HL053PA2] gi|315082761|gb|EFT54737.1| porphobilinogen deaminase [Propionibacterium acnes HL027PA2] gi|315086120|gb|EFT58096.1| porphobilinogen deaminase [Propionibacterium acnes HL002PA3] gi|315087704|gb|EFT59680.1| porphobilinogen deaminase [Propionibacterium acnes HL072PA1] gi|315102048|gb|EFT74024.1| porphobilinogen deaminase [Propionibacterium acnes HL046PA1] gi|327331372|gb|EGE73111.1| hydroxymethylbilane synthase [Propionibacterium acnes HL096PA2] gi|327333359|gb|EGE75079.1| hydroxymethylbilane synthase [Propionibacterium acnes HL096PA3] gi|327334882|gb|EGE76593.1| hydroxymethylbilane synthase [Propionibacterium acnes HL097PA1] gi|327449721|gb|EGE96375.1| porphobilinogen deaminase [Propionibacterium acnes HL043PA2] gi|327454571|gb|EGF01226.1| porphobilinogen deaminase [Propionibacterium acnes HL087PA3] gi|327456643|gb|EGF03298.1| porphobilinogen deaminase [Propionibacterium acnes HL083PA2] gi|328755626|gb|EGF69242.1| porphobilinogen deaminase [Propionibacterium acnes HL087PA1] gi|328756706|gb|EGF70322.1| porphobilinogen deaminase [Propionibacterium acnes HL025PA2] gi|328761895|gb|EGF75405.1| hydroxymethylbilane synthase [Propionibacterium acnes HL099PA1] gi|332674709|gb|AEE71525.1| porphobilinogen deaminase [Propionibacterium acnes 266] Length = 334 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 93/333 (27%), Positives = 142/333 (42%), Gaps = 34/333 (10%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M R+GTR S LA + L ++ + ++T GD + +L +GG Sbjct: 1 MS--AIRLGTRASTLATTQSEMVAGLLRS----EGLDVNLTTITTHGDT-STASLAAMGG 53 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F I L+ GE D AVHS KD+PT GL I A R D RD ++ +L D Sbjct: 54 IGVFASAIRAALLEGEADIAVHSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHD 113 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------NNKAHAIL 170 L + +GT S RR A LL R D++++D RG ++TRL ++ A++ Sbjct: 114 LPQEASVGTGSPRRAAQLLAVRPDLTIVDIRGNVDTRLGRVKGLGRYAKNGGKEDLDAVV 173 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV---KVINHEDTW 227 LA +G+ RL + E L+ P+P QGA+ +E + + +L I+ T Sbjct: 174 LAASGLARLGHSGAVTEFLDPSVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTR 233 Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKG------STLYFYGIVLASDGKIFHE------ 275 + ERA L+ L+ C + I A K L +V A DG Sbjct: 234 LAATAERAVLSHLEAGCAAPIGALAQLKPVSGKSLQVLTLDVVVAAVDGSRTVREQVSVE 293 Query: 276 --VSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 A +G AA+ + +V + Sbjct: 294 LPAEVEPALAAAHTLGVTAAEELLDDGAADVAD 326 >gi|156937477|ref|YP_001435273.1| porphobilinogen deaminase [Ignicoccus hospitalis KIN4/I] gi|166217774|sp|A8AAB4|HEM3_IGNH4 RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|156566461|gb|ABU81866.1| hydroxymethylbilane synthase [Ignicoccus hospitalis KIN4/I] Length = 304 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 105/298 (35%), Positives = 149/298 (50%), Gaps = 9/298 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITN--RTLTEIGGKG 62 +I R S L+L S L+ P +I + T GD+ L + G G Sbjct: 2 KIKIAARGSKLSLKQVSMFTSYLLKF--FPDLEYEVITVKTTGDKANAPFEELAKRGLTG 59 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL-KDL 121 LF +E+ K ++ G+ D AVHS KD+PT+L L+I+A+LPR+ DV IS DL Sbjct: 60 LFEKEVNKAVLEGKADVAVHSLKDLPTELDPRLEIAAFLPRDPPYDVLISRAGNYDIFDL 119 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 SV+GTSS RRKAL+ R D+ V D RG ++TRL KL + AI+LA AG+ RL Sbjct: 120 PKGSVVGTSSARRKALIKNLRPDLVVKDLRGNVDTRLEKLRRGEYDAIVLAEAGVSRLG- 178 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 V L+ FPPSPGQG I T + +L+K I+ + ER L E Sbjct: 179 LNVDYVRLDWRLFPPSPGQGIIVAVTR-KGSEISDLLKSISDVKSEKLATAERTVLKEFG 237 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G C A+ A+ +GS + VL+ G+ +V G +G AA+ ++ + Sbjct: 238 GGCFVALGAIAFEEGSLIRLRATVLSPSGRERVDVELIGKG--PEEVGMRAAERLKAL 293 >gi|159906164|ref|YP_001549826.1| porphobilinogen deaminase [Methanococcus maripaludis C6] gi|159887657|gb|ABX02594.1| porphobilinogen deaminase [Methanococcus maripaludis C6] Length = 304 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 85/302 (28%), Positives = 133/302 (44%), Gaps = 15/302 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+ L D+ II + T GD+ N+ L ++G G+FT Sbjct: 3 LRIGTRGSTLAMIQTEYIAGLLNDL----GVETEIIIVKTTGDKDQNKKLVDLGI-GVFT 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ K++ EID AVHS KD+PT LQI+A RE D+ I Sbjct: 58 KELDNKMLENEIDIAVHSLKDVPTLWSDELQIAATPKRESPDDIIIWRKDSDFDIEHDEL 117 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSS+RR + L +++ RG + TR++KL + I++A AG+ R + Sbjct: 118 NVGTSSIRRTSFLQFTHPNLTPKLLRGNVATRIDKLRKGEYDTIIMAKAGLIRQGIDLSE 177 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 +E P+P QG I + + + K E+++ I + T+ ER L E G C+ Sbjct: 178 FNYKKLEIL-PAPAQGVIGVASRKADAKINEILEKICDKKTYIEATAERWALKEYGGGCQ 236 Query: 246 SAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNG-------NRCDAINIGRDAAQYI 296 + FA + L ++ G I S G + A +G Sbjct: 237 APFGAFANYDTEAGILNLRCELVDEQGTIKRVKSNEGFIFCNTDDVELAKELGARVGALF 296 Query: 297 RF 298 + Sbjct: 297 KE 298 >gi|220913234|ref|YP_002488543.1| porphobilinogen deaminase [Arthrobacter chlorophenolicus A6] gi|219860112|gb|ACL40454.1| porphobilinogen deaminase [Arthrobacter chlorophenolicus A6] Length = 332 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 97/331 (29%), Positives = 158/331 (47%), Gaps = 33/331 (9%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL +T L V P + ++ + T GD + L+++GG G+F Sbjct: 2 TVRIGTRASKLALTQTQQTADQLAAVGGFP---VELVHIRTDGD-VLTGPLSQMGGTGVF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L+ E D AVHS KD+PT GL ++A R D+RDV + L DL Sbjct: 58 VAALRDALLRNECDVAVHSLKDLPTGAAVGLSLAATPKRVDVRDVLCARDGLKLADLPAG 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--------------NNNKAHAIL 170 + +GT S RR A L R+D+ ++D RG ++TRL ++ + A++ Sbjct: 118 AKVGTGSPRRAAQLRAARADLEIVDIRGNVDTRLGRVPGLPGNATNEVVPGKSCDLDAVV 177 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ------------ELV 218 LA AG++R+ + + E L + P+ GQG++ IE+ + + + + Sbjct: 178 LAAAGLERISRLDAVSEYLEPDVMLPAAGQGSLAIESRTADAPRKPGSTEGSQEVLAQAL 237 Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR 278 ++ DT +V ERA LA L+ C + + +AY KGS L+ +V A DGK R Sbjct: 238 AALDDPDTRLAVTAERALLARLEAGCAAPVGAYAYRKGSMLHLEAVVCAVDGKASVRDKR 297 Query: 279 -NGNRCD--AINIGRDAAQYIRFISNKNVFN 306 + A +G + A+ + ++ + Sbjct: 298 ATDGLTEVGATLLGIELAEVLLAGGAADIAD 328 >gi|150402047|ref|YP_001329341.1| porphobilinogen deaminase [Methanococcus maripaludis C7] gi|150033077|gb|ABR65190.1| porphobilinogen deaminase [Methanococcus maripaludis C7] Length = 304 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 83/303 (27%), Positives = 132/303 (43%), Gaps = 15/303 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA+ L D+ I+ + T GD+ + L ++G G+F Sbjct: 2 KLRIGTRGSTLAMVQTEYIAGLLNDL----GVETEIVIVKTTGDKDQTKKLVDLG-LGVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T+E++ K++ EID AVHS KD+PT LQI+A RE D+ I Sbjct: 57 TKELDSKMLENEIDIAVHSLKDVPTLWSDELQITATPKRESPDDIIIWRKDSDFDIEHDE 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +GTSS+RR + L +++ RG + TR++KL N + I++A AG+ R + Sbjct: 117 LDVGTSSIRRTSFLQFTHPNLTPKLLRGNVATRIDKLRNREYDTIIMAKAGLIRQGIDLS 176 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 ++ P+P QG I + + + K E+++ I + T+ ER L E G C Sbjct: 177 EFNYTKLDML-PAPAQGVIGVASRKADIKINEILEKICDKKTYIEATAERWALKEYGGGC 235 Query: 245 KSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNG-------NRCDAINIGRDAAQY 295 ++ FA + L ++ G I S G A +G Sbjct: 236 QAPFGAFAVYDTEDGILNLRCELVDEQGTIKRVKSNEGFVICTTDEVELAKELGARVGAL 295 Query: 296 IRF 298 + Sbjct: 296 FKE 298 >gi|261417417|ref|YP_003251100.1| porphobilinogen deaminase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373873|gb|ACX76618.1| porphobilinogen deaminase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 351 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 94/346 (27%), Positives = 150/346 (43%), Gaps = 55/346 (15%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPP-----------HNIVIIPLSTKGDR 49 M RI TR S LALA +++ + + ++ ++T+GDR Sbjct: 1 MSDLKLRIATRKSALALAQTTMAADAIVAANSVIGNAADSNNARDSLTYELVSMTTEGDR 60 Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV 109 +++L GGKG+F +E+E L+ G D A+HS KDMP ++L +++A L RED RD Sbjct: 61 RLDKSLASFGGKGVFIKELEIALLEGRADIAIHSLKDMPAEVLPQFKLAAVLKREDPRDA 120 Query: 110 FISHTAQ---SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA 166 F+S DL + +GT S+RR L R D+ + RG I+TR+ KL + Sbjct: 121 FLSRGGSAGIRFMDLPAGARVGTGSIRRVVQLKALRPDLEYVPIRGNIQTRIGKL--AEL 178 Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVN----------NPKAQE 216 ++LA AG+KR+ + E + E P+ GQG + IET + + Sbjct: 179 DGVVLAAAGLKRMGLADQVTEYFSTEQMLPASGQGILAIETLNDATVQESRVTGRADLAQ 238 Query: 217 LVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY--CKGS----------------- 257 ++ +N T+ + E A+L L+ C+ +A FA C+ Sbjct: 239 ILARVNDVATYCIASAEMAYLKALNAGCQFPVASFAEFVCEDGIENRGTCGALEENANRI 298 Query: 258 --TLYFYGIVLASDGKIFHEVSRNGNRC--------DAINIGRDAA 293 TL GI + GN + N+G + A Sbjct: 299 AQTLKIRGIYWDEKSEKLLRAEVAGNVDLNSEDCVQQSKNLGIELA 344 >gi|325091275|gb|EGC44585.1| porphobilinogen deaminase [Ajellomyces capsulatus H88] Length = 352 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 95/319 (29%), Positives = 144/319 (45%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K F IGTR S LAL R +L P + I+ D L E K Sbjct: 24 TKSTFTIGTRKSKLALVQTDLVRDALKAA--WPQYEFDILTKDAAADLDKVTPLREFTSK 81 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119 L+TEE+E+ L++ +ID VH+ KD+PT++ + A +PRED RDV + Sbjct: 82 NLWTEELEELLLAKQIDLVVHALKDVPTQIPTTCILGAMMPREDPRDVLVIKKGLPNMTL 141 Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 +L S++GTSS+RR A L R + D RG I+TRL KL+ + A++LA AG+ Sbjct: 142 AELPAGSIVGTSSVRRIAQLSRHYPHLIAKDVRGNIDTRLTKLDAQDGPFSALILAAAGL 201 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R + I L+ +D + GQG + IE N+ + +E+V+ I T + ER Sbjct: 202 LRTGQGARISHYLDSKDGKMLHAVGQGGLGIEIRANDERMKEMVEKIGDRKTTFACLAER 261 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 L L+G C + + TL IV + DGK E+ + +A Sbjct: 262 NLLRTLEGGCSAPLGVETEWVQDAEGKETLMLRAIVSSVDGKEAVEIEKVEKVTSGEEAE 321 Query: 287 NIGRDAAQYIRFISNKNVF 305 + A + + + Sbjct: 322 VFAKKVADELVVLGAGRIL 340 >gi|240275436|gb|EER38950.1| porphobilinogen deaminase [Ajellomyces capsulatus H143] Length = 345 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 95/319 (29%), Positives = 144/319 (45%), Gaps = 17/319 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K F IGTR S LAL R +L P + I+ D L E K Sbjct: 17 TKSTFTIGTRKSKLALVQTDLVRDALKAA--WPQYEFDILTKDAAADLDKVTPLREFTSK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119 L+TEE+E+ L++ +ID VH+ KD+PT++ + A +PRED RDV + Sbjct: 75 NLWTEELEELLLAKQIDLVVHALKDVPTQIPTTCILGAMMPREDPRDVLVIKKGLPNMTL 134 Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 +L S++GTSS+RR A L R + D RG I+TRL KL+ + A++LA AG+ Sbjct: 135 AELPAGSIVGTSSVRRIAQLSRHYPHLIAKDVRGNIDTRLTKLDAQDGPFSALILAAAGL 194 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R + I L+ +D + GQG + IE N+ + +E+V+ I T + ER Sbjct: 195 LRTGQGARISHYLDSKDGKMLHAVGQGGLGIEIRANDERMKEMVEKIGDRKTTFACLAER 254 Query: 235 AFLAELDGSCKSAIAGFAYCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR---CDAI 286 L L+G C + + TL IV + DGK E+ + +A Sbjct: 255 NLLRTLEGGCSAPLGVETEWVQDAEGKETLMLRAIVSSVDGKEAVEIEKVEKVTSGEEAE 314 Query: 287 NIGRDAAQYIRFISNKNVF 305 + A + + + Sbjct: 315 VFAKKVADELVVLGAGRIL 333 >gi|47224902|emb|CAG06472.1| unnamed protein product [Tetraodon nigroviridis] Length = 344 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 98/359 (27%), Positives = 141/359 (39%), Gaps = 99/359 (27%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + RIGTR S LA L +++ P ++ I+ +ST GD+I + L++IG K L Sbjct: 18 RVIRIGTRKSQLARIQTDSVAEKLKELY--PDVHLEIVAMSTTGDKILDTALSKIGEKSL 75 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKD 120 FT+E+E L E+D VHS KD+PT L G I A L RE+ D + H ++L Sbjct: 76 FTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVLKRENPHDAVVLHPKNAGKTLDA 135 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDF------------------------RGKIET 156 L HSVIGTSSLRR A L + + D RG + T Sbjct: 136 LPAHSVIGTSSLRRAAQLKKRFPHLDFKDIVSSERCFLPVQPGHRCFFLSSRSQRGNLNT 195 Query: 157 RLNKLN-NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215 RL KL+ AI+LA AG++R+ + I +IL ED + GQ Sbjct: 196 RLKKLDEKEDFAAIILAAAGLRRMGWDNRISQILEPEDCMYAVGQ--------------- 240 Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275 +G C +A K S LY G V + DG + Sbjct: 241 -------------------------EGGCSVPVAVHTKVKDSQLYLTGAVYSLDGSDSLK 275 Query: 276 VSR--------NGNRCD---------------------AINIGRDAAQYIRFISNKNVF 305 + +G+ + A +G D A+ + K + Sbjct: 276 ETMQTSVAAPADGSPDEVDECARVGVTANKIPGEAQDRAERLGVDLAKLLLSKGAKEIL 334 >gi|47206204|emb|CAF91821.1| unnamed protein product [Tetraodon nigroviridis] Length = 385 Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats. Identities = 107/378 (28%), Positives = 155/378 (41%), Gaps = 87/378 (23%) Query: 13 SPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKL 72 S LA L +++ P ++ I+ +ST GD+I + L++IG K LFT+E+E L Sbjct: 1 SQLARIQTDSVAEKLKELY--PDVHLEIVAMSTTGDKILDTALSKIGEKSLFTKELENAL 58 Query: 73 ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGT 129 E+D VHS KD+PT L G I A L RE+ D + H ++L L HSVIGT Sbjct: 59 ERNEVDLVVHSLKDLPTSLPPGFTIGAVLKRENPHDAVVLHPKNAGKTLDALPAHSVIGT 118 Query: 130 SSLRRKALLLRWRSDISVIDF------------------------RGKIETRLNKLNN-N 164 SSLRR A L + + D RG + TRL KL+ Sbjct: 119 SSLRRAAQLKKRFPHLDFKDIVSSERCFLPVQPGHRCFFLSSRSQRGNLNTRLKKLDEKE 178 Query: 165 KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224 AI+LA AG++R+ + I +IL ED + GQGA+ +E + E+V V++ Sbjct: 179 DFAAIILAAAGLRRMGWDNRISQILEPEDCMYAVGQGALAVEVRAKDADILEMVSVLHDP 238 Query: 225 DTWDSVNCERAFLAEL----------------------------DGSCKSAIAGFAYCKG 256 DT ERAFL L +G C +A K Sbjct: 239 DTVLRCIAERAFLKHLVQHTHTHTHTHTHTRSLAVAHWNLFCLQEGGCSVPVAVHTKVKD 298 Query: 257 STLYFYGIVLASDGKIFHEVSR--------NGNRCD---------------------AIN 287 S LY G V + DG + + +G+ + A Sbjct: 299 SQLYLTGAVYSLDGSDSLKETMQTSVAAPADGSPDEVDECARVGVTANKIPGEAQDRAER 358 Query: 288 IGRDAAQYIRFISNKNVF 305 +G D A+ + K + Sbjct: 359 LGVDLAKLLLSKGAKEIL 376 >gi|27377509|ref|NP_769038.1| porphobilinogen deaminase [Bradyrhizobium japonicum USDA 110] gi|27350653|dbj|BAC47663.1| porphobilinogen deaminase [Bradyrhizobium japonicum USDA 110] Length = 313 Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats. Identities = 84/310 (27%), Positives = 131/310 (42%), Gaps = 20/310 (6%) Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG-LFTEEIEKKLI 73 +ALA E L +P ++ I+ T GD L GGKG F +I ++ Sbjct: 1 MALAQTEEIARRLTAA--VPGLDVEIVKFDTTGDLDQTSKLLPHGGKGGAFVAQIRAAVL 58 Query: 74 SGEIDCAVHSAKDMP-TKLLKGLQISAYLPREDIRDVFISHT----AQSLKDLALHSVIG 128 SGE+ A+HS KDMP + GL I A L R+ D + + IG Sbjct: 59 SGELQAAMHSLKDMPGNEDTPGLVIGATLSRDPPSDALVLRDGVTLEALRQSRGKGFKIG 118 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN------------KAHAILLAYAGI 176 T+++RR A R D+ VI FRG +TR+ KL+N A A+++A +G+ Sbjct: 119 TNAVRRAAYARRLFPDVEVIHFRGAADTRVRKLDNGEKQRLPDGGAVGPADALIMARSGL 178 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ I + P+ GQG + +E + + ++++ I+ + ER Sbjct: 179 DRVGLASRIAYEFTPAEMLPAAGQGIVAVECAAQDWQTRKILSSIDDPAAHACADAEREV 238 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L L+G C S +AGF+ G + VL G E SR G+ +GR + Sbjct: 239 LWVLNGHCNSPVAGFSTIAGDQMSLTASVLDLSGNTIIEASRTGSANRPRELGRAVGLEL 298 Query: 297 RFISNKNVFN 306 + Sbjct: 299 LGKGAAEIIE 308 >gi|217077158|ref|YP_002334874.1| porphobilinogen deaminase [Thermosipho africanus TCF52B] gi|217037011|gb|ACJ75533.1| porphobilinogen deaminase [Thermosipho africanus TCF52B] Length = 280 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 142/288 (49%), Gaps = 15/288 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 ++GTR S LAL L K+ + +IP+ TKGD + + + EIGGKG+F Sbjct: 2 KIKVGTRGSKLALIQTNMVVERLKS--KLSNVSFEVIPIKTKGDIVK-KPVGEIGGKGVF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +IEK L++GEID A+HS KDMP+K+ GL +++ L RED RDVF+ L + Sbjct: 59 VSDIEKLLLNGEIDIAIHSMKDMPSKIPDGLYLTSVLKREDARDVFVGKKDFFLLE--SG 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGTSS RR L R DI ++ RG ++TRL ++ + I+LA AG+KRL EK Sbjct: 117 AKIGTSSKRRMLQLSILRPDIEIVPIRGNVDTRLKRI--GELDGIVLAAAGLKRLGLEKK 174 Query: 185 IKEILNIEDFPPSPGQGAICIE-THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I +IE P+P QG + +E T P +++ I DT ER L+ Sbjct: 175 ITNYFSIEQVVPAPCQGILALEFTSKFLPLFEKVKDEIVDPDTEFVSKIERKVLSISGFD 234 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN-IGR 290 C + + L F+ K ++ A +G Sbjct: 235 CNTPFGFYCEKNDDNLVFHIF------KNEKRERLVADKERAYEVLGE 276 >gi|163784391|ref|ZP_02179282.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1] gi|159880338|gb|EDP73951.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1] Length = 185 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 83/186 (44%), Positives = 115/186 (61%), Gaps = 2/186 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL A L P + +I ++TKGD+I + L ++GGKGLF Sbjct: 2 KIRIGTRKSKLALWQANFVAEQLKK--HFPELEVELIKITTKGDKILDVPLAKVGGKGLF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE+ ++ EID AVHS KD+PT +GL + A RED RD F+S SLK+L Sbjct: 60 VKEIEEAMLRNEIDIAVHSLKDVPTYFPEGLGLVAITKREDPRDAFLSVKYSSLKELPEG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRRK L R D+ + D RG ++TR+ KL + A++LAYAG+KRL E Sbjct: 120 AVVGTSSLRRKVQLKINRPDLQIKDLRGNVDTRIRKLEEGQYDAVILAYAGLKRLGLEDK 179 Query: 185 IKEILN 190 +K++ + Sbjct: 180 VKQVFS 185 >gi|296109592|ref|YP_003616541.1| porphobilinogen deaminase [Methanocaldococcus infernus ME] gi|295434406|gb|ADG13577.1| porphobilinogen deaminase [Methanocaldococcus infernus ME] Length = 287 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 93/296 (31%), Positives = 138/296 (46%), Gaps = 17/296 (5%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LAL A L + + + + T+GD+I +R L IG G+FT Sbjct: 1 MIIGSRGSKLALYQANLVLKKLKSL----GIDGEVKIIKTRGDQIKDRALHSIGI-GVFT 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E++ L++ EID AVHS KD+PT L L R+ D+ I++ Sbjct: 56 KELDLSLLNHEIDIAVHSLKDIPTVWNSRL-SYVVLERDYPNDLLIANKEDI-------K 107 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSSLRR+A L D RG ++TRL KL +N+ AI+L+ AG++RL + Sbjct: 108 VIGTSSLRRRAFLKELYRDAEFKLLRGNVDTRLRKLKDNEYDAIVLSEAGVRRLNIDLSE 167 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + + P+PGQG I + + K + +++ IN + T+ ER L EL C Sbjct: 168 FLVYKLPIL-PAPGQGVIAVAYRKEDEKIKNILEKINDKKTFLETTAERKALNELGCGCH 226 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIRF 298 FA +G L V D I E S + A +G + +R Sbjct: 227 VPFGAFAKYEGKRLMLKVAVANKDRVIKKESSICCEVDEIEKAEKLGESLGRELRR 282 >gi|114640812|ref|XP_001149046.1| PREDICTED: porphobilinogen deaminase [Pan troglodytes] Length = 276 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 89/243 (36%), Positives = 130/243 (53%), Gaps = 6/243 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA ++L + P II +ST GD+I + L++IG K Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVTTLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIK 177 + L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA AG++ Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQ 194 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFL 237 R+ + +IL+ E+ + GQGA+ +E + +LV V++ +T ERAFL Sbjct: 195 RMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFL 254 Query: 238 AEL 240 L Sbjct: 255 RHL 257 >gi|323358316|ref|YP_004224712.1| porphobilinogen deaminase [Microbacterium testaceum StLB037] gi|323274687|dbj|BAJ74832.1| porphobilinogen deaminase [Microbacterium testaceum StLB037] Length = 372 Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 88/282 (31%), Positives = 144/282 (51%), Gaps = 8/282 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M P R+GTR S LALA + ++ + ++P+ ++GD +L+++GG Sbjct: 1 MSA-PLRLGTRRSALALAQSQMVADAVAAAS---GREVELVPIVSEGDVNR-ASLSQLGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 +G+F + + L +G D VHS KD+PT +GL I+A PRED RDV I+ L Sbjct: 56 RGVFANGLREALAAGRCDFLVHSLKDLPTAQPEGLVIAATPPREDARDVVITRDGTPLHA 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT S RR A LR + + D RG +++RL ++ + + A++LA AG+ RL Sbjct: 116 LEAGARVGTGSPRRIAQALRHNPRLDIRDIRGNVDSRLARVRDGELDAVILAAAGLSRLG 175 Query: 181 KE--KVIKEILNIEDFPPSPGQGAICIETHVNNP-KAQELVKVINHEDTWDSVNCERAFL 237 E + E L + ++P +PGQG++ +ET + + ++ E T ++ ER L Sbjct: 176 GELGGLQSEPLGLAEWPTAPGQGSLAVETRTDIDADILAALSALDDEVTRAAITAERTVL 235 Query: 238 AELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 + LD C + + A L +V A DG + R Sbjct: 236 SVLDAGCHAPVGTHASIVDGDLRLRAVVYALDGAHRIGIDRT 277 >gi|297627045|ref|YP_003688808.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922810|emb|CBL57388.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 310 Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 89/303 (29%), Positives = 144/303 (47%), Gaps = 11/303 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++ +IGTR S LA + + T + + V +P ++ + T GD + L+ G Sbjct: 12 RRVLKIGTRGSRLARSQSAMTAALIEQVTGLP---TELVIVHTDGD-DLSIPLSAPPRPG 67 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 F + L+ GE+D AVHS KD+P + GL + A R D +S A L +L Sbjct: 68 AFVARLRDVLLDGEVDIAVHSFKDLPFAPMPGLSVVAVPQRAAALDALVSRDALGLDELP 127 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 S +GTSS RR + LLR+R D+ ++ RG ++TR+ K+ + A +LA AG++RL Sbjct: 128 AGSKVGTSSPRRASALLRYRDDLEIVPIRGNVDTRIRKVREGRVDAAVLAAAGLERLGLH 187 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E+++ + P+P QGA+ +E ++P V IN DT V ER L + Sbjct: 188 DEITELIDPKVIVPAPAQGALAVEMRTDDP-LAATVAQINDHDTRIQVAAERQVLTGVQA 246 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDG------KIFHEVSRNGNRCDAINIGRDAAQYI 296 +C +AI + +G +L + G + R DA +G A+ + Sbjct: 247 TCTTAIGAHSVLQGYSLTLMADLTDHMGVAHAHVARTIGLRRGDPTDDARALGESVAEQL 306 Query: 297 RFI 299 Sbjct: 307 LER 309 >gi|284047684|ref|YP_003398023.1| porphobilinogen deaminase [Acidaminococcus fermentans DSM 20731] gi|283951905|gb|ADB46708.1| porphobilinogen deaminase [Acidaminococcus fermentans DSM 20731] Length = 288 Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats. Identities = 90/300 (30%), Positives = 134/300 (44%), Gaps = 16/300 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K + TR S LALA L + I ++T GDR L +IGG+G Sbjct: 1 MKKLIVATRGSRLALAQTHIVCRLLEEA----GVETEIRTITTAGDRDRIHALVKIGGRG 56 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F EIE++L+SGE D AVHSAKD+P +L GL I+ + D RD + + L Sbjct: 57 IFVREIERELLSGEADIAVHSAKDLPYQLASGLVIAGTPSQADPRDALV---LLKERKLE 113 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 SV+GT S RR + R ++ D RG + TRL+KL + AI+LA AGI+RL + Sbjct: 114 AGSVVGTGSPRRIREISRVLPELVFRDIRGNVTTRLHKLERGEYDAIVLAMAGIQRLALD 173 Query: 183 KVIKEILNI--EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 +I + E P+ QG I +E + + L++ I+ +TW ER + Sbjct: 174 MEQFQIRPLSTEQVIPAGCQGIIGVECRQKDRELVRLLQQISDPETWRRFQWERQLFTSM 233 Query: 241 DGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 C + K + +V DGK R G + + + + Sbjct: 234 KVDCSRPVGIHCRLLKSGRMELLAMV---DGK---RARRLGMEKEGKALCASLKEELYDR 287 >gi|256787075|ref|ZP_05525506.1| porphobilinogen deaminase [Streptomyces lividans TK24] Length = 303 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 80/301 (26%), Positives = 145/301 (48%), Gaps = 17/301 (5%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 +A + + ++ V P + ++ ++T GD L +IGG G+F + L+ GE Sbjct: 1 MAQSGQVADAVSQVTGRP---VELVEITTYGDTSR-EHLAQIGGTGVFVAALRDALLRGE 56 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 +D AVHS KD+PT +GL ++A RED RDV ++ A+ L DL + +GT + RR A Sbjct: 57 VDFAVHSLKDLPTAQHEGLVVAAIPEREDPRDVVVARDARKLTDLPRGARVGTGAPRRMA 116 Query: 137 LLLRWRSDISVI----DFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192 L + + RG ++TR+ + + + A++LA AG+ R+ + + + L+++ Sbjct: 117 QLNAYARTHGMEIETVPIRGNVDTRIGYVRSGELDAVVLAAAGLNRVGRIDEVTDFLSVD 176 Query: 193 DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252 P+PGQGA+ +E +N + ++ T +V ER+ LA L+ C + + A Sbjct: 177 TVLPAPGQGALAVECAADNASLIAALAELDDPFTRAAVTAERSLLAALEAGCSAPVGALA 236 Query: 253 YCKGS-----TLYFYGIVLASDGKIFHEVSRNGNR----CDAINIGRDAAQYIRFISNKN 303 + G+V +DG ++S G A+ +G + A + Sbjct: 237 DLLADGQTVKEMRLRGVVGTTDGSTLVQLSTTGPVPETHEAALALGGELAAEMLAQGAAG 296 Query: 304 V 304 + Sbjct: 297 L 297 >gi|297516477|ref|ZP_06934863.1| porphobilinogen deaminase [Escherichia coli OP50] Length = 221 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 108/207 (52%) Query: 99 AYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRL 158 RED RD F+S+ +L L S++GTSSLRR+ L R D+ + RG + TRL Sbjct: 5 TICEREDPRDAFVSNNYDNLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRL 64 Query: 159 NKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV 218 +KL+N + AI+LA AG+KRL E I+ L E P+ GQGA+ IE +++ + +EL+ Sbjct: 65 SKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELL 124 Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR 278 +NH +T V ERA L+G C+ I +A ++ +V A DG R Sbjct: 125 AALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGER 184 Query: 279 NGNRCDAINIGRDAAQYIRFISNKNVF 305 G DA +G A+ + + + Sbjct: 185 RGAPQDAEQMGISLAEELLNNGAREIL 211 >gi|325001831|ref|ZP_08122943.1| porphobilinogen deaminase [Pseudonocardia sp. P1] Length = 322 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 86/316 (27%), Positives = 145/316 (45%), Gaps = 21/316 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +IGTR S LA+A + L H ++ +ST GDR +T++G Sbjct: 1 MS--TLKIGTRPSKLAVAQSTTIADRLTAA----GHPSELVTVSTSGDRSM-APVTQLG- 52 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + L +G+ID AVHS KD+PT + L+I+A RED RD ++ + L + Sbjct: 53 VGVFVSALRDALDAGDIDVAVHSFKDLPTAQPEHLRIAAVPGREDPRDALVT-GGRVLGE 111 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT S RR A L + V+ RG ++TR+ K+ + + A+++A AG++RL Sbjct: 112 LGRGARVGTGSPRRAAQLYALGQGLEVVPIRGNVDTRIGKVRSGELDAVVVAAAGLRRLG 171 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL-VKVINHEDTWDSVNCERAFLAE 239 + + E+++ P+P QGA+ IE + ++ V++ +V ERA LA Sbjct: 172 RIEEADELIDPLQMLPAPAQGALAIECRETDTGLADVLRSVLDDPGVRAAVAAERAVLAT 231 Query: 240 LDGSCKSAIAGFAYCKG---------STLYFYGI--VLASDGKIFHEVSRNGNRCDAINI 288 L+ C + + A L + V S G A + Sbjct: 232 LEAGCTAPVGALADVVSDLDDDGRAVDRLSLRAVTGVGDITEGDVLRASVTGEMDAAEKL 291 Query: 289 GRDAAQYIRFISNKNV 304 G A + + +++ Sbjct: 292 GATLAHELLDLGGEDL 307 >gi|88608800|ref|YP_506274.1| putative porphobilinogen deaminase [Neorickettsia sennetsu str. Miyayama] gi|88600969|gb|ABD46437.1| putative porphobilinogen deaminase [Neorickettsia sennetsu str. Miyayama] Length = 286 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 98/294 (33%), Positives = 153/294 (52%), Gaps = 11/294 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++GTRCSPLAL A +L ++ + T GD +++ LTE+GGK LF Sbjct: 4 LKVGTRCSPLALIQARLVERALAPYCA----RTDLVEVKTSGDIVSDVPLTEVGGKALFL 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+KL++GEID AVHS KD+P L++ L R DVF+S ++ L + Sbjct: 60 KELEEKLLTGEIDIAVHSMKDVPAFYHDDLEVVPVLKRAIPNDVFVSFRYPNMLSLPNGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGT + RR VI RG I TR+ K I+LA+ ++RL ++I Sbjct: 120 VIGTCAPRRVVQ---LNQRFRVIPLRGNIATRIEK--AKNLDGIILAFCALERLGLRRMI 174 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+++ P QGA+C+E + +EL+ I+ +T ERAFL E++G CK Sbjct: 175 SEVIHENVMLPGVAQGALCVEFRKKDRFLRELILNISDRETIICTAAERAFLEEINGDCK 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +A+ A K + LYF G++ + + +G+ +A +GR AA + + Sbjct: 235 TALGALAIVKNNILYFTGMLAKDNRPRYFRT--SGSCLNAKQVGRRAALALLRM 286 >gi|327539486|gb|EGF26101.1| porphobilinogen deaminase [Rhodopirellula baltica WH47] Length = 315 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 87/313 (27%), Positives = 140/313 (44%), Gaps = 29/313 (9%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + A L I+PL +KGD R + GLFT+ I++ L+ E Sbjct: 1 MWQAEHVAKLLKKH----GFQTEIVPLVSKGDTDM-RPIDGTRQVGLFTKRIQQALVDDE 55 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL-----------ALHS 125 D AVHS KD+PT+ ++A PRE + D + + + Sbjct: 56 ADVAVHSLKDLPTEPDSRFVLAAVPPRESVLDALVFADNSPHLEPQTGAESPLDYLPQGA 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GT S RR A L + R D+ V+ RG ++TRL KLN + AI+LA+AGI RL+ + Sbjct: 116 RVGTGSTRRLAQLKQLRPDLEVLPIRGNVQTRLAKLNAGEFDAIVLAHAGILRLEMTDLP 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 + +++ P+PGQGA+ IE ++ A + +N + ER L+EL G C Sbjct: 176 HRLFPLDEMIPAPGQGALGIEVRSDDAGAMHAIANLNDAAARLAATAERKVLSELHGGCL 235 Query: 246 SAIAGFAYCK----GSTLYFYGIVLASDGKIFHEVSRNG---------NRCDAINIGRDA 292 + IA A + G+ L IV+++DG+ + + +A +G Sbjct: 236 APIACHAKLETSNHGTELCLRAIVMSADGEQRLQEDARITVQPNDADLHVAEAHELGTLV 295 Query: 293 AQYIRFISNKNVF 305 A+ +R + Sbjct: 296 AKRLRDKGADKLI 308 >gi|172039905|ref|YP_001799619.1| hypothetical protein cur_0225 [Corynebacterium urealyticum DSM 7109] gi|171851209|emb|CAQ04185.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 316 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 85/314 (27%), Positives = 141/314 (44%), Gaps = 18/314 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR--TLTEIG 59 + +GTR S LA A R ++D ++ + + T GD + ++G Sbjct: 3 NNRRLLVGTRGSTLATTQAGHVRQGMIDA----GYDAELHIVHTPGDASQASQIPVAKVG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G+FTE + L E D AVHS KD+PT + R D R+V IS + L Sbjct: 59 -VGVFTETLRTALDERECDVAVHSFKDLPTAPDARFRA-VVPKRVDSREVLISVDNKKLM 116 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L + +GTS+ RR + L R D+ ++ RG I TR+ ++ + A++LA AG++R+ Sbjct: 117 ELPEGAKVGTSAPRRVSQLRALRPDLQILPLRGNIGTRMGRV-GDDLDAVILARAGLERV 175 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E ++ E P+P QGA+C+E ++ +A V NH ++ V ER L+ Sbjct: 176 GWLDKAAESIDPELILPAPAQGALCVEVRADDEEAWNSVADQNHTPSYACVVSERTVLST 235 Query: 240 LDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNGNRC-------DAINIGR 290 L+ C + +A A + L G V A DG +R + A +G Sbjct: 236 LEAGCSAPVAAHATLNEQQNQLTVTGGVFAIDGSRKLLETRTVDIDLAGDWRAAAAGVGA 295 Query: 291 DAAQYIRFISNKNV 304 + + + + Sbjct: 296 EIGRILLDAGAAEL 309 >gi|256088596|ref|XP_002580415.1| hydroxymethylbilane synthase; porphobilinogen deaminase [Schistosoma mansoni] gi|238665988|emb|CAZ36654.1| hydroxymethylbilane synthase [Schistosoma mansoni] Length = 411 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 88/300 (29%), Positives = 142/300 (47%), Gaps = 27/300 (9%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+G+R S LAL + L + P ++ ++T GD+I + +L++IG K Sbjct: 7 RNVVRVGSRRSNLALLQTGMAVNLLQKQN--PHILFEVVEMATVGDKILDVSLSKIGDKS 64 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK--- 119 LFT+E+E L+SGE+D VHS KD+P+ L GL + R DV + + Sbjct: 65 LFTKELENALLSGEVDLVVHSLKDVPSTLPSGLVLGCVFARVSPEDVVLMAPHYRGRKLS 124 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK-------------- 165 DL + S +GTS++RR A L R + + RG + TRL KL+ Sbjct: 125 DLPIGSTVGTSAVRRVATLTRKYPHLKFVSIRGNLNTRLAKLDTPPASKDNCCSGNPSPS 184 Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED 225 AI+LA AG++R+ I ++ + D + QGA+ E + + +L+ I+ E Sbjct: 185 YDAIILAKAGVERMGWSHRIDQV--LTDSFYAVSQGALACECRLVDNFIMDLLSHIHDES 242 Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFA--YCKGS----TLYFYGIVLASDGKIFHEVSRN 279 + ER+ + +LDG C I + KG L + +L+ DG E S + Sbjct: 243 AALTTIAERSLMRQLDGGCSIPIGVRSDLVLKGDLNYYQLTLHANILSVDGGKSIERSAS 302 >gi|150401746|ref|YP_001325512.1| porphobilinogen deaminase [Methanococcus aeolicus Nankai-3] gi|150014449|gb|ABR56900.1| porphobilinogen deaminase [Methanococcus aeolicus Nankai-3] Length = 342 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 87/304 (28%), Positives = 151/304 (49%), Gaps = 14/304 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 IGTR S LAL ++ L ++++ +I + + T GD+ + L+E+G G+F Sbjct: 43 KIIIGTRGSKLALTQTNYIKALLENLNE--NIDIEVKIVKTTGDKDQSSKLSELG-LGVF 99 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL-----K 119 T+E++ K+++ EID AVHS KD+PT + L I++ RE D+ + + + Sbjct: 100 TKELDLKMLNNEIDIAVHSLKDVPTVWNENLTIASTPKRESYADLILWNKEDNDINIEKC 159 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 + + ++GTSS+RR+ L ++ RG ++TRLNKL N + AI+LA AG+ RL Sbjct: 160 NEKDNIIVGTSSIRRQEFLKIKYPNLKTKLLRGNVDTRLNKLRNKEYDAIILAEAGLNRL 219 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 K + + P+P QG + + + +N + +++ INH+ T+ ER L E Sbjct: 220 KMDLSDFNYERLNIL-PAPAQGVVGVASRTDNKEVISILQKINHKKTFLEALAERYALRE 278 Query: 240 LDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQ 294 G C++ + L V+ + E + N + D A N+G + Sbjct: 279 YGGGCQAPFGALSKYDEENKILNLKCSVVIGNTIKSKEENINCDIMDIEGAKNLGIKIGK 338 Query: 295 YIRF 298 YI+ Sbjct: 339 YIKQ 342 >gi|144479|gb|AAA23113.1| porphobilinogen deaminase [Prosthecochloris vibrioformis] Length = 279 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 90/276 (32%), Positives = 138/276 (50%), Gaps = 12/276 (4%) Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96 NI + + T GD + + L++IG GLFT++IEK L++GEID AVHS KD+PT ++ Sbjct: 2 NISLKLVKTTGDVLLDSPLSKIGDMGLFTKDIEKHLLAGEIDLAVHSLKDVPT-----VR 56 Query: 97 ISAYLPREDIRDVFISHTAQSLKDLALHS----VIGTSSLRRKALLLRWRSDISVIDFRG 152 A+L ++ + TSSLRR + LL R D+ ++D RG Sbjct: 57 RKAWLSPRSPSVKTPRRHHFQVRQGVDGPSAEAKMATSSLRRMSQLLSLRPDLEIMDIRG 116 Query: 153 KIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNP 212 + TR K + A++LAYAG+ RL+ I EIL E P+ GQGA+ IET ++ Sbjct: 117 NLNTRFKKFDEGDFDAMMLAYAGVYRLEFSDRITEILPHETMLPAVGQGALGIETRTDDA 176 Query: 213 KAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKI 272 + +E+V+V+N ++T ERA L L G C+ I F TL V + DGK Sbjct: 177 ETREIVRVLNDDNTEMCCRAERALLRHLQGGCQIPIGSFGSYIDGTLKLLAFVGSVDGKT 236 Query: 273 FHEVSRN---GNRCDAINIGRDAAQYIRFISNKNVF 305 +A +G + A+ + + + + Sbjct: 237 GLRNEVTKAVKTPEEAEAVGIELAEILLSMGAEKIL 272 >gi|289581680|ref|YP_003480146.1| porphobilinogen deaminase [Natrialba magadii ATCC 43099] gi|289531233|gb|ADD05584.1| porphobilinogen deaminase [Natrialba magadii ATCC 43099] Length = 378 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 88/362 (24%), Positives = 149/362 (41%), Gaps = 61/362 (16%) Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + R+ TR S LA A + +L + + + ++ + T GD+I + + +G Sbjct: 1 MRTRGTLRLATRGSTLARRQATLVKEALENRR----YEVELVTVETTGDQIRDELIHRLG 56 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G F E++++++ G++D A+HS KDMPT+ L +A R D I+ +L+ Sbjct: 57 KTGAFVRELDERVLEGDLDGAIHSMKDMPTEQPDDLVTAAVPERGRPGDYLITPEGATLE 116 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL------------------ 161 +L + +GTSSLRR+A LL R D++V RG ++TRL KL Sbjct: 117 ELPQGATVGTSSLRRRAQLLSERPDLTVEPLRGNVDTRLEKLLAPSLQAEHEERSEADKE 176 Query: 162 ----------NNNKAHAILLAY--------------------------AGIKRLKKEKVI 185 + + AG+ R + + Sbjct: 177 RKGNTGEEDFEPEFDQTVDEWFDGLSELEKQALGREVETEYDAIVLAQAGLVRSGLDHYV 236 Query: 186 K-EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + L F P+PGQGA+ + T + A E+ I+H + ER LAEL G C Sbjct: 237 DAQELPTGTFVPAPGQGALAV-TATDGETATEIQSAIDHPRSRVETTVERTVLAELGGGC 295 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + I +A +G ++ V DG+ +R+ + R+ AQ + + Sbjct: 296 IAPIGIYAIVQGEYVHATVSVFNRDGEESVAATRDLPVENHATAAREFAQDLADRGAAEL 355 Query: 305 FN 306 Sbjct: 356 IE 357 >gi|326802537|ref|YP_004320356.1| porphobilinogen deaminase [Sphingobacterium sp. 21] gi|326553301|gb|ADZ81686.1| Porphobilinogen deaminase [Sphingobacterium sp. 21] Length = 546 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 90/303 (29%), Positives = 151/303 (49%), Gaps = 16/303 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + IGTR S LAL A + L + + + T+GD I + L ++ GK Sbjct: 1 MDRTLIIGTRGSDLALWQANHVKDRLATI----GVQAELKVIKTQGDNIQHLRLDKLEGK 56 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI----SHTAQS 117 G FT+E+E++L++ +ID AVHS KD+PT GL+I+A RED ++ I + Sbjct: 57 GFFTKELEEELLAEKIDIAVHSHKDLPTANPPGLRIAAVSEREDPSELLIILKDCVDLKK 116 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 + ++++GTSS RRKA LL +R D+ + D RG + TRL KL + K AI+LA AG++ Sbjct: 117 RLSVKHNAIVGTSSNRRKAQLLAFRPDLEIEDLRGNVNTRLQKLRDEKYDAIMLAKAGVE 176 Query: 178 RLKKE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 RLK + + EI+ + P+P QG + I+ ++ E+++ ++ +D +++ ER Sbjct: 177 RLKLDLSEFHVEIIPPTEIIPAPAQGVLAIQIRESDHTLYEVLQKLHQKDVAETIGVERK 236 Query: 236 FLAELDGSCKSAIAGFAY--CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAA 293 L +G C + + G ++ A DG A + + Sbjct: 237 VLNLFEGGCHMPLGCYCRKTTTGYEVW-TAK--AKDG-ESFPTRLYLKAESAAGLAEEIV 292 Query: 294 QYI 296 + Sbjct: 293 EKF 295 >gi|289705146|ref|ZP_06501550.1| hydroxymethylbilane synthase [Micrococcus luteus SK58] gi|289558174|gb|EFD51461.1| hydroxymethylbilane synthase [Micrococcus luteus SK58] Length = 377 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 90/361 (24%), Positives = 146/361 (40%), Gaps = 65/361 (18%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M P RIGTR S LA +L + ++ + T+GD +T +L +GG Sbjct: 1 MT--PLRIGTRGSALATTQTTHVAEALTERS---GLAHELVVIRTEGD-VTTGSLASLGG 54 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + ++ G +D AVHS KD+P + L+I+A R D+RD + +L Sbjct: 55 TGVFASALRAAVLDGAVDAAVHSLKDLPAAQPETLEIAAVPARADLRDALCARDGLTLAT 114 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------------NNN 164 L + +GT S RR A L R D+ ++D RG ++TRL ++ Sbjct: 115 LPEGARVGTGSPRRVAQLKALRPDLELVDIRGNVQTRLARVPGLEQHDDHAPAAAGSPRG 174 Query: 165 KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNP------------ 212 A++LA AG+ RL + VI E ++ E P+PGQGA+ +E + Sbjct: 175 DLDAVILACAGLDRLGLDHVITERIDPEVMVPAPGQGALAVEIRAEDESFLGRALLDPQA 234 Query: 213 ---KAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST-----LYFYGI 264 + +++++ DT +V ERA L L+ C + I A + + Sbjct: 235 PVGRLHAALELVDDRDTHVAVTAERALLRRLEAGCAAPIGAVARVSDGEAGAPRIEMTAM 294 Query: 265 VLASDGKIFHEVSRN-----------GNRC------------DAINIGRDAAQYIRFISN 301 V A DG + + G+ A +G A+ Sbjct: 295 VAALDGSRVLRRTSSVQLDPVPADVAGDPAAADEWLEDTLFVAAEALGVHVAEQFVAEGA 354 Query: 302 K 302 Sbjct: 355 D 355 >gi|239918007|ref|YP_002957565.1| hydroxymethylbilane synthase [Micrococcus luteus NCTC 2665] gi|259646260|sp|C5CB88|HEM3_MICLC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|239839214|gb|ACS31011.1| hydroxymethylbilane synthase [Micrococcus luteus NCTC 2665] Length = 377 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 90/361 (24%), Positives = 144/361 (39%), Gaps = 65/361 (18%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M P RIGTR S LA +L ++ + T+GD +T +L +GG Sbjct: 1 MS--PLRIGTRGSALATTQTSHVAEALTARS---GLAHELVVIRTEGD-VTTGSLASLGG 54 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + ++ G +D AVHS KD+P + L+I+A R D+RD + +L Sbjct: 55 TGVFASALRAAVLDGVVDAAVHSLKDLPAAQPETLEIAAVPARADLRDALCARDGLTLAT 114 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------------NNN 164 L + +GT S RR A L R D+ ++D RG ++TRL ++ Sbjct: 115 LPEGARVGTGSPRRVAQLKALRPDLELVDIRGNVQTRLARVPGLEQHDDHAPAAVGSPRG 174 Query: 165 KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNP------------ 212 A++LA AG+ RL + VI E ++ E P+PGQGA+ +E + Sbjct: 175 DLDAVILACAGLDRLGLDHVITERIDPEVMVPAPGQGALAMEIRAEDESFLGRALLDPEA 234 Query: 213 ---KAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST-----LYFYGI 264 + +++++ DT +V ERA L L+ C + I A + + Sbjct: 235 PVGRLHAALELVDDRDTHVAVTAERALLRRLEAGCAAPIGAVARVGDGEAGAPRIEMTAM 294 Query: 265 VLASDGKIFHEVS-----------RNGNRC------------DAINIGRDAAQYIRFISN 301 V A DG + G+ A +G A+ Sbjct: 295 VAALDGSRVLRRTSSVQLDPVPADVVGDPAAADEWLEDTLFVAAEALGVHVAEQFVAEGA 354 Query: 302 K 302 Sbjct: 355 D 355 >gi|311896763|dbj|BAJ29171.1| putative porphobilinogen deaminase [Kitasatospora setae KM-6054] Length = 318 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 94/291 (32%), Positives = 147/291 (50%), Gaps = 17/291 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M P R+GTR S LA+A + + V I + ++ ++T GD ++ +L IGG Sbjct: 1 MT--PLRLGTRRSALAMAQSGMVAEA---VAGITGRRVELVEITTYGD-VSRESLARIGG 54 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + L+ G ID AVHS KD+PT GL ++A RED RD ++ +L + Sbjct: 55 TGVFVSALRDALLEGRIDLAVHSLKDLPTAAPAGLLLAAVPEREDARDALVARDGLTLAE 114 Query: 121 -----LALHSVIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILL 171 +GT S RR A L W + RG ++TR+ + + + A++L Sbjct: 115 LVGKSTGRAVRVGTGSPRRMAQLNAWARARGAELETVAIRGNVDTRIGFVASGELDAVVL 174 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ RL + I E L+ E P+PGQGA+ +E +P ++ ++H T +V Sbjct: 175 ATAGLNRLGRAAEITEHLDTELMLPAPGQGALAVECV--DPTLAAVLARLDHRPTRAAVV 232 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 ERA LA L+ C + +A A G+ L G+V ++DG ++S NG Sbjct: 233 AERALLATLEAGCSAPVAALATWAGTELRLDGVVGSTDGTELIKMSANGPL 283 >gi|171185430|ref|YP_001794349.1| porphobilinogen deaminase [Thermoproteus neutrophilus V24Sta] gi|229846306|sp|B1YDP0|HEM3_THENV RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|170934642|gb|ACB39903.1| porphobilinogen deaminase [Thermoproteus neutrophilus V24Sta] Length = 296 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 91/301 (30%), Positives = 142/301 (47%), Gaps = 9/301 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+ TR S L+L E + + V P I+ + T GD I ++ L +IG KG+F Sbjct: 2 KIRVATRGSKLSLIQTEELLAQIKAVE--PDIRFEIVVVKTTGDLIQDKPLFQIGVKGVF 59 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ ++ GE D AVHS KD+P+ L GL ++ Y R D +S +L+ L Sbjct: 60 EKEVNLAVLRGEADMAVHSLKDLPSDLTPGLALAGYSRRAPPNDALVSPRGYTLETLPRG 119 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK--RLKKE 182 +V+GTSS+RR L R D+ + RG ++TR+ K+ + + A ++A AG++ Sbjct: 120 AVVGTSSVRRAEFLKAARPDLEIKPLRGNVDTRVAKILSGQYDAAVMAAAGLQRLYGGAP 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 + L +ED PP PGQG + + +L++ + ERAFLAE+ Sbjct: 180 PIPAVPLAVEDLPPPPGQGIVAAVAREEDTWLTDLLRRASDRKAAAEAAAERAFLAEVGA 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C A+ G A + + F G H V G D +GR AA + + K Sbjct: 240 GCHVAVGGIARQTPAGIEFTAGYAQ--GGRKHLVKVYG--EDPTEVGRRAA-RLVAQAMK 294 Query: 303 N 303 Sbjct: 295 K 295 >gi|171914695|ref|ZP_02930165.1| Hydroxymethylbilane synthase [Verrucomicrobium spinosum DSM 4136] Length = 318 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 103/308 (33%), Positives = 149/308 (48%), Gaps = 20/308 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG----- 59 R+GTR S LAL A ++L H P + ++T GD+ + +E Sbjct: 8 TLRLGTRGSELALRQAEMVEAALHAAH--PYLRVERKVIATTGDKRPDLRFSEFTEGDRL 65 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 KG+FT+E+E L SGEID AVHS KD+PT L + I+ LPR I DV IS +L Sbjct: 66 DKGIFTKELEIALASGEIDIAVHSLKDVPTVLDEKFFIAGVLPRAPIEDVLISREGYTLA 125 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKR 178 L + +GTSS+RR L + ++ RG + TR+ KL + AILLA AG++R Sbjct: 126 TLPAGAKVGTSSVRRIRQLQWLNPGVECVEIRGNVPTRIRKLFAPSDLDAILLARAGLER 185 Query: 179 ----------LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD 228 + + + IL+ E+F P+ GQGAI IE V++ E +K INHE+T+ Sbjct: 186 LSLLDGEHVVVDGQPLHAVILDCEEFLPAAGQGAIGIEARVDDAHTLEFLKAINHEETYA 245 Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD--GKIFHEVSRNGNRCDAI 286 V ER FL L C++ I + + L V G+ EV+ Sbjct: 246 RVTAEREFLHILKAGCQTPIGAHTFLENGVLQMKVRVFDETDPGRPPKEVTSTEPYHSPK 305 Query: 287 NIGRDAAQ 294 + + A Sbjct: 306 GLAAEVAA 313 >gi|232245|sp|P30527|HEM3_YERIN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|48614|emb|CAA47276.1| hydroxymethylbilane synthase [Yersinia intermedia] Length = 183 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 76/184 (41%), Positives = 103/184 (55%), Gaps = 2/184 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQVELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + +D RD F+S + D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPVAFPEGLGLVTICEPDDPRDAFVSPHFAHIDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S++G SSLRR+ L R D+ + D RG + TRL KL+N HAI+LA AG+ RL Sbjct: 119 LPAGSIVGNSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRLG 178 Query: 181 KEKV 184 Sbjct: 179 LASR 182 >gi|254796754|ref|YP_003081590.1| porphobilinogen deaminase [Neorickettsia risticii str. Illinois] gi|254589999|gb|ACT69361.1| porphobilinogen deaminase [Neorickettsia risticii str. Illinois] Length = 286 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 102/294 (34%), Positives = 157/294 (53%), Gaps = 11/294 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++G RCS LALA A +L + I ++ + T GD +++ LTE+GGK LF Sbjct: 4 LKVGARCSTLALAQARLVERALAPYCE----RIDLVGVRTSGDILSDIPLTEVGGKALFL 59 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+E+KL++GEID AVHS KD+P L++ L R DVF+S ++ L + Sbjct: 60 KELEEKLLTGEIDIAVHSMKDVPAFYHDDLEVVPVLKRAIPNDVFVSFRYPNMLSLPSGA 119 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGT + RR VI RG I TR+ K I+LA+ G++RL K+I Sbjct: 120 VIGTCAPRRVVQ---LNQRFRVIPLRGNIATRVEK--AKNLDGIILAFCGLERLGLCKMI 174 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E+++ + P QGA+C+E + +EL+ I+ +T ERAFL E++G CK Sbjct: 175 SEVIHEDVMLPGVAQGALCVEFRKKDHFLRELILNISDRETIICTTAERAFLEEINGDCK 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 +A+ A K +TLYF G++ + + +G+ +A IGR AA + + Sbjct: 235 TALGALAVVKNNTLYFTGMLGKDNRPCYFRT--SGSCLNAKQIGRSAALALLRM 286 >gi|18312026|ref|NP_558693.1| porphobilinogen deaminase [Pyrobaculum aerophilum str. IM2] gi|25453025|sp|Q8ZYW7|HEM3_PYRAE RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|18159451|gb|AAL62875.1| porphobilinogen deaminase (hemC) [Pyrobaculum aerophilum str. IM2] Length = 297 Score = 176 bits (445), Expect = 5e-42, Method: Composition-based stats. Identities = 90/298 (30%), Positives = 145/298 (48%), Gaps = 8/298 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++ TR S L+L E + + V P + I + T GD + ++ L +IG KG+F Sbjct: 3 LKVATRGSRLSLLQTEEFLAQIKAVE--PRVDFEIKIVKTTGDLVQDKPLFQIGVKGIFE 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+ ++ GE D A+HS KD+P+++ GL ++ + R D +S L+ L + Sbjct: 61 KEVNLAVLKGEADIAIHSLKDLPSEISPGLVLAGFSKRTLPYDAVVSAVGYDLESLPKGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE--K 183 ++GTSS+RR + R D+ + RG ++TR+ K+ K A ++A AGI RL E Sbjct: 121 LVGTSSVRRAEFIKSLRPDVRIEPLRGNVDTRVQKILQGKYDAAVMAAAGILRLYGESPP 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V +L E PP PGQG + +L+K + ER FL + Sbjct: 181 VKLSLLRPELLPPPPGQGIVAAVVREGEGWLIDLLKKASDPRATVEALAEREFLKNVGAG 240 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 C A+ G A+ + + F AS GK F V G D + +GR AA+ I+ ++ Sbjct: 241 CHVAVGGTAFSRNGYIEFIAGYAAS-GKRFV-VKLFG--EDPVEVGRRAAEEIKRVAA 294 >gi|726352|gb|AAC44323.1| porphobilinogen deaminase [Yersinia pestis] Length = 184 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 82/180 (45%), Positives = 105/180 (58%), Gaps = 2/180 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M K RI TR SPLAL A + L H P I ++P+ T+GD I + L ++GG Sbjct: 1 MLDKIIRIATRQSPLALWQAHYVQHLLQANH--PGLQIELVPMVTRGDIILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ G D AVHS KD+P +GL + RED RD F+S L D Sbjct: 59 KGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDD 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L SV+GTSSLRR+ L R D+ + D RG + TRL KL+N AI+LA AG+KRL Sbjct: 119 LPAGSVVGTSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLG 178 >gi|323305779|gb|EGA59518.1| Hem3p [Saccharomyces cerevisiae FostersB] Length = 275 Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats. Identities = 82/274 (29%), Positives = 128/274 (46%), Gaps = 13/274 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + IG R S LA+ + + + + P ++ + L T GD+I + L GG Sbjct: 1 MGPETLHIGGRKSKLAVIQSNHVLKLIEEKY--PDYDCKVFTLQTLGDQIQFKPLYSFGG 58 Query: 61 KGLFTEEIEKKLIS----GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA- 115 K L+T+E+E L ++D VHS KDMPT L +G ++ R D D + Sbjct: 59 KALWTKELEDHLYHDDPSKKLDLIVHSLKDMPTLLPEGFELGGITKRVDPTDCLVMPFYS 118 Query: 116 --QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILL 171 +SL DL ++GTSS+RR A L R + RG I+TRL KL++ + I+L Sbjct: 119 AYKSLDDLPDGGIVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIIL 178 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 A AG+ R+ E I + + + + GQGA+ IE + K +++ I + Sbjct: 179 ASAGLMRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCL 238 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGST--LYFYG 263 ERA + L+G C I + T + G Sbjct: 239 SERALMRTLEGGCSVPIGVESKYNEETKKITIKG 272 >gi|332668763|ref|YP_004451770.1| porphobilinogen deaminase [Cellulomonas fimi ATCC 484] gi|332337800|gb|AEE44383.1| porphobilinogen deaminase [Cellulomonas fimi ATCC 484] Length = 326 Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats. Identities = 94/309 (30%), Positives = 140/309 (45%), Gaps = 25/309 (8%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ RIGTR S LAL +L I + + T GDR +L +GG Sbjct: 1 MPQQ-VRIGTRASTLALTQTGHVADALAAHG---GLAIETVRVRTDGDR-LTGSLASLGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + L+ G D AVHS KD+PT GL ++A PRED RD + +L D Sbjct: 56 AGVFVTALRDALLDGRCDVAVHSLKDLPTADAPGLVLAAVPPREDPRDALCARDGLTLAD 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-----NNKAHAILLAYAG 175 L + +GT S RR A LL R D+ V+D RG ++TRL ++ A++LA AG Sbjct: 116 LPRGARVGTGSPRRAAQLLAARPDLDVVDIRGNVDTRLGRVAGSPTGPGDLDAVVLARAG 175 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKA------QELVKVINHEDTWDS 229 + R+ + + + E+ + P+PGQGA+ +ET + ++ T + Sbjct: 176 LARIGRLEAVTELFGPDVMLPAPGQGALAVETRAAGLTTDLAGPLHAALAALDDRPTRLA 235 Query: 230 VNCERAFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRN----GNRCD 284 V ERA LA L+ C + + A TL +V+ +DG G Sbjct: 236 VLAERALLARLEAGCAAPVGTLATLDADGTLTLDAVVVRTDGTASLRRRARTALPGTAAQ 295 Query: 285 ----AINIG 289 A +G Sbjct: 296 DVVAARALG 304 >gi|255326986|ref|ZP_05368062.1| hydroxymethylbilane synthase [Rothia mucilaginosa ATCC 25296] gi|255296203|gb|EET75544.1| hydroxymethylbilane synthase [Rothia mucilaginosa ATCC 25296] Length = 377 Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats. Identities = 88/372 (23%), Positives = 150/372 (40%), Gaps = 69/372 (18%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVH----------KIPPHNIVIIPLSTKGDRI 50 M + +GTR S LAL + ++ ++ + + + T+GD + Sbjct: 1 MSHHEYTLGTRGSALALTQSRIAAETVTSLYTEHQAHHGAENPEAVSFELRTVKTEGD-V 59 Query: 51 TNRTLTEIGGKGLFTEEI-------EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPR 103 L +GG G+F + E +D AVHS KD+P+ GL ++A L R Sbjct: 60 LTGPLATLGGTGVFAAALRQRLLDGENASEENRVDMAVHSLKDLPSAPCPGLVVAATLKR 119 Query: 104 EDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-- 161 ED RD ++ ++ L S +GT S RR A L R D+ ++D RG + TR+ ++ Sbjct: 120 EDPRDALVARDGLTVDTLPEGSRVGTGSPRRAAQLRALRPDLEIVDVRGNVGTRIGRVKG 179 Query: 162 ----------------------------NNNKAHAILLAYAGIKRLKKEKVIKEILNIED 193 + A++LA +G+KRL KE++I E L+ Sbjct: 180 LEEHAGKQVVLRQNAETSERADHGVGTERSGDCDAVVLAVSGLKRLGKEELITEYLDPTR 239 Query: 194 FPPSPGQGAICIETHVNNPKAQELVK------------------VINHEDTWDSVNCERA 235 P+PGQGA+ +E + + + NH +T +V+ ERA Sbjct: 240 MLPAPGQGALALEVRESEFENPDSAVLADPEVARPVRALGRALLAANHHETRLAVSAERA 299 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDA 292 L L+ C + I +A+ L +V + DG + + A +G Sbjct: 300 LLRRLEAGCAAPIGAYAHVVEGDLVLNVVVASPDGTDMLRHTSATAELDVPGAERLGVRV 359 Query: 293 AQYIRFISNKNV 304 A+ + + + Sbjct: 360 AEDLLQMGAAAL 371 >gi|103488353|ref|YP_617914.1| porphobilinogen deaminase [Sphingopyxis alaskensis RB2256] gi|123379466|sp|Q1GP41|HEM3_SPHAL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|98978430|gb|ABF54581.1| porphobilinogen deaminase [Sphingopyxis alaskensis RB2256] Length = 315 Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats. Identities = 105/306 (34%), Positives = 152/306 (49%), Gaps = 8/306 (2%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 P RIGTR SPLA+A A ++L+ H + + I+P++ GDRI +R L E+GGK Sbjct: 8 DNPLRIGTRASPLAMAQAHMAAAALIAAHGLAMAALEIVPMTATGDRIQDRALAEVGGKA 67 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLK 119 L+T E++ L +G ID AVHS KD+ T + A L R D RD + AQ + Sbjct: 68 LWTRELDAALDAGTIDVAVHSLKDVETLRDARFFLGAMLERADPRDRLVVREGIAAQKIS 127 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L + +GTSS RR A + R R D+ + RG + TRL KL +A A LLA AG++RL Sbjct: 128 ELPHGARLGTSSPRRAAQVRRLRPDLDTVLLRGNVATRLAKLAAGEADATLLAAAGLERL 187 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I + E P+ QGAI IE ++ L+ I+H T +V ERA LA Sbjct: 188 GM-HDIGAVQGTELLLPAASQGAIGIECRADDAATIALLAAIDHAPTHRAVAAERALLAV 246 Query: 240 LDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 L G C+S +A +A + L + + DG DA + + Sbjct: 247 LGGDCRSPVAAYAEWQADGVLRLDAEIFSEDGADHVAGHVI--VTDAGVVA-ALGHRLLA 303 Query: 299 ISNKNV 304 + ++ Sbjct: 304 EAPPSI 309 >gi|320106346|ref|YP_004181936.1| porphobilinogen deaminase [Terriglobus saanensis SP1PR4] gi|319924867|gb|ADV81942.1| porphobilinogen deaminase [Terriglobus saanensis SP1PR4] Length = 350 Score = 175 bits (443), Expect = 9e-42, Method: Composition-based stats. Identities = 96/352 (27%), Positives = 145/352 (41%), Gaps = 60/352 (17%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT-------LTEI 58 R+G+R S LAL A +SL I+ GDR+ + E+ Sbjct: 3 LRLGSRGSQLALWQANHIAASLRGAGHTTKITIIRTT----GDRMQDPAYVKENPVTPEM 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 KG+F +EIE+ L+ GEID AVHS KD+PT + ++A R D RD +S L Sbjct: 59 DAKGIFIKEIEEALLRGEIDLAVHSLKDLPTVMDPRFTLAAIPTRADARDALLSPEWVQL 118 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L + +GT+S RRKA +L R D+ ++ RG I+TRL KL + A++LA AGI R Sbjct: 119 HTLPDGARVGTTSPRRKAQMLAHRPDLQFVEIRGNIDTRLRKLAAGQCDALVLACAGIDR 178 Query: 179 LKKEKVIKEILNI--------------------------------------------EDF 194 L + L+ + Sbjct: 179 LGARLLHPVDLDPAHPEHGRAPHVECVTHADHDHLEEHPTEHEPAGQVDWIRERFAADTM 238 Query: 195 PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254 P+PGQGA+ +ET + P+ V ++ +T +V ER L L G C + + Sbjct: 239 CPAPGQGALGVETLSDAPEVIAAVSALDDAETRYAVEAERWMLHALGGGCSLPVGAWCVD 298 Query: 255 KGSTLYFYGIVLASDGKIFHEVSRNGNRCD-AINIGRDAAQYIRFISNKNVF 305 K V A+DG + N + A ++G A + + + Sbjct: 299 K----RLTANVTAADGDEMLSSEISANEGESARSLGERVAADLVARGARELL 346 >gi|118431819|ref|NP_148522.2| hydroxymethylbilane synthase [Aeropyrum pernix K1] gi|152031618|sp|Q9Y9J0|HEM3_AERPE RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|116063141|dbj|BAA81310.2| hydroxymethylbilane synthase [Aeropyrum pernix K1] Length = 307 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 87/294 (29%), Positives = 137/294 (46%), Gaps = 6/294 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+ R S L+L + L + + ++ + + GD ++R L IG G+FT Sbjct: 3 VRVAARGSRLSLLQVEQALEELSRYAGV-SMHWEVVRVKSAGDVWSDRPLESIGVVGVFT 61 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTK-LLKGLQISAYLPREDIRDVFISHT-AQSLKDLAL 123 E+++ + SG D AVHS KDMPT L+I R RD IS ++DL Sbjct: 62 REVDRAVASGAADIAVHSLKDMPTSGYGGPLKIVYIASRPSARDALISRQGPGRVEDLEP 121 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S +GTSS RR+AL L + I V + RG ++TRL KL AI+ + AG+ RL + Sbjct: 122 GSTLGTSSARRRALSLHYNPRIRVENLRGNLDTRLRKLREGLYDAIIASEAGLIRLGVD- 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V L+ FPP+PGQG + + +++++ ++ W ER L Sbjct: 181 VEYTPLDPSYFPPAPGQGFVAV-VARVGSNVEKMLRDLDKPPWWHVAWAERGVLEGARAG 239 Query: 244 CKSAIAGFAYCKG-STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 C++ +A +A G S + L+ DG + G +A IG + + Sbjct: 240 CRTPVAAYAEPLGRSMVRVTAAALSPDGSRAYWARAEGRIEEARRIGVSLGEEL 293 >gi|205374358|ref|ZP_03227156.1| porphobilinogen deaminase [Bacillus coahuilensis m4-4] Length = 252 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 97/246 (39%), Positives = 139/246 (56%), Gaps = 3/246 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + +G+R S LAL L + + + TKGD I + TL+++GGKG Sbjct: 1 MRKIVVGSRRSTLALTQTNWVIEQLKQLGG--NFTFEVKEIVTKGDVILDVTLSKVGGKG 58 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LF +EIE+ ++ EID AVHS KDMP++L GL + PRED RD IS LKDL Sbjct: 59 LFVKEIEQAMMDKEIDMAVHSMKDMPSELPSGLTLGCVPPREDRRDALISKNHVKLKDLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +VIGTSSLRR A LL R D+ + RG I+TRL KL+ + AI+LA AG+ R+ Sbjct: 119 KGAVIGTSSLRRGAQLLAVRPDLDIKWIRGNIDTRLAKLDGEEYDAIILAAAGLARMGWA 178 Query: 183 -KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 V+ E L+ + P+ GQGA+ IE ++ + +L+ N ++T + ER FL +++ Sbjct: 179 KDVVTEFLSEDICVPAIGQGALGIECREDDEELLDLLSKFNDKETERTTKAERTFLHKME 238 Query: 242 GSCKSA 247 G S Sbjct: 239 GGVPSP 244 >gi|126640355|ref|YP_001083339.1| porphobilinogen deaminase [Acinetobacter baumannii ATCC 17978] Length = 226 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 73/222 (32%), Positives = 121/222 (54%) Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS 143 KD+P L +GL ++ RED D F+S+ + DL + +GTSSLRRK+ +L+ R Sbjct: 1 MKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQGAKVGTSSLRRKSQILKQRP 60 Query: 144 DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAI 203 D+ +ID RG + TRL KL++ + AI+LA AG+KRL + I+ + P+ GQGA+ Sbjct: 61 DLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLAERIRHCIEPSVSLPAVGQGAL 120 Query: 204 CIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYG 263 +E ++ + L++ + H +T V ERAF A L+G C+ IAG+A + ++ G Sbjct: 121 GLECRADDQEVLALIQPLLHPETDVCVRAERAFNAYLEGGCQVPIAGYATLQDGKIHIEG 180 Query: 264 IVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 V + DG+ +A +G + A+ + ++ Sbjct: 181 RVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAGDLL 222 >gi|119480587|ref|XP_001260322.1| porphobilinogen deaminase [Neosartorya fischeri NRRL 181] gi|119408476|gb|EAW18425.1| porphobilinogen deaminase [Neosartorya fischeri NRRL 181] Length = 363 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 94/334 (28%), Positives = 136/334 (40%), Gaps = 39/334 (11%) Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG--------G 60 G R S LAL S L P I S GD + G Sbjct: 26 GCRKSELALVQTRWVTSKLGQ-TLDPSPTFQIATGSAVGDADKQAPFAVLSKLTGGSDIG 84 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K L+T E+E L++G++ C VHS KDMPT L + A RED D + Sbjct: 85 KSLWTNELELDLVAGKVHCLVHSLKDMPTTLPPHCLLGAVPEREDCSDAVCMRSDLKFTS 144 Query: 121 L---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAG 175 + S++GTSS RRKAL+ R + V++ RG ++TRL KL+ +++ ILLA AG Sbjct: 145 IDQLPPGSIVGTSSSRRKALVRRNWPHLEVVECRGNVDTRLAKLDAPSSRFSCILLATAG 204 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + RL I L+ FP + GQGA+ +E + P ELV+ ++H+ + ERA Sbjct: 205 LLRLGLGHRITHRLDDSIFPYAVGQGALGLEVSTDRPDILELVRHVDHKPSRWRGIAERA 264 Query: 236 FLAELDGSCKSAIAGFAYCK----------------------GSTLYFYGIVLASDGKIF 273 L L G C S I + + G L +VL +G Sbjct: 265 MLRSLQGGCSSPIGVQSSLEPLGKEENGSTEDDSQRGRDSSSGGNLSLRAMVLHIEGTSE 324 Query: 274 HEVSRNGNR---CDAINIGRDAAQYIRFISNKNV 304 +A +G A + + + Sbjct: 325 IVAEDMATVRCDEEAELLGVSVANMLLAKGARGL 358 >gi|312878897|ref|ZP_07738697.1| porphobilinogen deaminase [Aminomonas paucivorans DSM 12260] gi|310782188|gb|EFQ22586.1| porphobilinogen deaminase [Aminomonas paucivorans DSM 12260] Length = 301 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 94/290 (32%), Positives = 137/290 (47%), Gaps = 11/290 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 + TR SPLA +L + + +ST GDR L GG G F Sbjct: 1 MILLTRGSPLARIQTRGWMDALESL----GAETTLQAVSTHGDRDRTTPLPCFGGFGAFV 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + +E+KL++GE D AVHS KD+P +GL ++ LPR + D+ ++ SL+ L + Sbjct: 57 KALEEKLLAGEGDGAVHSLKDVPVAQPEGLVLAGVLPRGPVGDLLVTREGLSLETLPPGA 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +G+SSLRR A LR R D+ + RG ++TRL KL + A++LA AG++RL + Sbjct: 117 RVGSSSLRRTAQGLRVRKDLRFLCCRGNVQTRLRKLEAGELDALILAEAGVRRLGLDLPG 176 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L F +PGQGA+ +E + L + NH TW V ER L C Sbjct: 177 AVRLP---FLSTPGQGAVALEAR-AGSVLESLARQTNHLPTWLEVCGERQVLGAFGKGCS 232 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR---CDAINIGRDA 292 + +A +G L VLA DG S G +A +G+ Sbjct: 233 APVAVQGRYEGGVLTLEAEVLALDGSQSVGASLGGPAGTEEEARALGQTL 282 >gi|283457696|ref|YP_003362282.1| porphobilinogen deaminase [Rothia mucilaginosa DY-18] gi|283133697|dbj|BAI64462.1| porphobilinogen deaminase [Rothia mucilaginosa DY-18] Length = 454 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 90/372 (24%), Positives = 150/372 (40%), Gaps = 69/372 (18%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPP----------HNIVIIPLSTKGDRI 50 M + +GTR S LAL + ++ ++ + + + T+GD + Sbjct: 78 MSHHEYILGTRGSALALTQSRIAAETVTSLYTEHQAHHGAADAEVVDFTLRTVKTEGD-V 136 Query: 51 TNRTLTEIGGKGLFTEEI-------EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPR 103 L +GG G+F + E +D AVHS KD+P+ GL I+A L R Sbjct: 137 LTGPLATLGGTGVFAAALRQRLLDGENASEENRVDMAVHSLKDLPSAPCPGLVIAATLKR 196 Query: 104 EDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-- 161 ED RD ++ +L L S +GT S RR A L R D+ ++D RG + TR+ ++ Sbjct: 197 EDPRDALVARDGLTLDTLPEGSRVGTGSPRRAAQLRALRPDLEIVDIRGNVGTRIGRVKG 256 Query: 162 ----------------------------NNNKAHAILLAYAGIKRLKKEKVIKEILNIED 193 + A++LA +G+KRL KE++I E L+ Sbjct: 257 LEEHAGKQVVLRQNTETSERADHGVGTERSGDCDAVVLAVSGLKRLGKEELITEYLDPTR 316 Query: 194 FPPSPGQGAICIETHVNNPKAQELVK------------------VINHEDTWDSVNCERA 235 P+PGQGA+ +E + + + NH +T +V+ ERA Sbjct: 317 MLPAPGQGALALEVRESEFENPDPAVLADPEVARPVRALGRALLAANHHETRLAVSAERA 376 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE---VSRNGNRCDAINIGRDA 292 L L+ C + I +A+ L +V + DG + + A +G Sbjct: 377 LLRRLEAGCAAPIGAYAHVVEGDLVLSVVVASPDGTDMLRHTSATAELDVPGAERLGVRV 436 Query: 293 AQYIRFISNKNV 304 A+ + + + Sbjct: 437 AEDLLQMGAAAL 448 >gi|294815172|ref|ZP_06773815.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064] gi|294327771|gb|EFG09414.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064] Length = 333 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 13/306 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVH-KIPPHNIVIIPLSTKGDRITNRTLTEIG---GKGL 63 +G+R S LA A R L + + P + GDR TL+ + G Sbjct: 10 VGSRASNLAKAQ---VREYLRPLRERFPEITFTHRVILEGGDRDRTSTLSAVSAVNGGSA 66 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F+ E L G++D VHS KD+PT GL + RED+RD +L L Sbjct: 67 FSSAQEAALSRGDVDVVVHSLKDLPTANPAGLVLLPPPGREDVRDAL---CGSTLAGLRK 123 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GT + RR A LL R D+ V+ RG + RL K+ A++LA AG++RL + Sbjct: 124 GARVGTGAPRRVAQLLAVRPDLVVVPIRGNVPPRLKKIETMGLDAVVLAVAGLRRLGLDD 183 Query: 184 VIKEILNIEDFPPSPGQGAICIE--THVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I ++L ++ FPPSPGQGA+ I+ T ++ ++L+ + +V ERA LAEL Sbjct: 184 AIGDVLPLDLFPPSPGQGALGIQVRTDDHSAPLRDLLSTVGDASADAAVRAERALLAELH 243 Query: 242 GSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C + +A L G V + DG+ + G + +G A + Sbjct: 244 GGCSVPVGAYAEPLPNGELSLAGQVTSLDGRERVAGTLTGPATEPEKLGASLAALLIDRG 303 Query: 301 NKNVFN 306 + + Sbjct: 304 AHAILD 309 >gi|254387445|ref|ZP_05002684.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064] gi|326443531|ref|ZP_08218265.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064] gi|197701171|gb|EDY46983.1| porphobilinogen deaminase [Streptomyces clavuligerus ATCC 27064] Length = 329 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 13/306 (4%) Query: 8 IGTRCSPLALAHAFETRSSLMDVH-KIPPHNIVIIPLSTKGDRITNRTLTEIG---GKGL 63 +G+R S LA A R L + + P + GDR TL+ + G Sbjct: 6 VGSRASNLAKAQ---VREYLRPLRERFPEITFTHRVILEGGDRDRTSTLSAVSAVNGGSA 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 F+ E L G++D VHS KD+PT GL + RED+RD +L L Sbjct: 63 FSSAQEAALSRGDVDVVVHSLKDLPTANPAGLVLLPPPGREDVRDAL---CGSTLAGLRK 119 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 + +GT + RR A LL R D+ V+ RG + RL K+ A++LA AG++RL + Sbjct: 120 GARVGTGAPRRVAQLLAVRPDLVVVPIRGNVPPRLKKIETMGLDAVVLAVAGLRRLGLDD 179 Query: 184 VIKEILNIEDFPPSPGQGAICIE--THVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 I ++L ++ FPPSPGQGA+ I+ T ++ ++L+ + +V ERA LAEL Sbjct: 180 AIGDVLPLDLFPPSPGQGALGIQVRTDDHSAPLRDLLSTVGDASADAAVRAERALLAELH 239 Query: 242 GSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFIS 300 G C + +A L G V + DG+ + G + +G A + Sbjct: 240 GGCSVPVGAYAEPLPNGELSLAGQVTSLDGRERVAGTLTGPATEPEKLGASLAALLIDRG 299 Query: 301 NKNVFN 306 + + Sbjct: 300 AHAILD 305 >gi|83282130|ref|XP_729634.1| porphobilinogen deaminase [Plasmodium yoelii yoelii str. 17XNL] gi|23488022|gb|EAA21199.1| porphobilinogen deaminase, putative [Plasmodium yoelii yoelii] Length = 583 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 100/340 (29%), Positives = 170/340 (50%), Gaps = 41/340 (12%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGG 60 K IGTR SPLA+ + + + L+ K N+++ P+ T GD+I ++T+ GG Sbjct: 70 TKEIIIGTRNSPLAIKQSEKVKKKLLTYFKKINENINVILKPIKTTGDKILDKTVGSFGG 129 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG+FT+E++++LI +D VHS KD+PT L + +S +L R+ I D F+S ++L+D Sbjct: 130 KGIFTKELDEELIKNNVDICVHSLKDIPTVLPDNIHLSCFLKRDTINDAFLSIKYKNLRD 189 Query: 121 LALHSV-----------IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAI 169 + L S I TSSLRR + + ++ + RG I TR+ KL NN +I Sbjct: 190 INLSSHVIDKEIDLPRTIATSSLRRTSQIRYKYKNLKLKFIRGNINTRIAKLFNNSFDSI 249 Query: 170 LLAYAGIKR----------------------------LKKEKVIKEILNIEDFPPSPGQG 201 ++A+ G++R + + + LN P+ QG Sbjct: 250 IIAFCGLERLVSKKILRQIMKNNIKDKSYIINYKNISIDLRHLNIQKLNTNIMCPALCQG 309 Query: 202 AICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYF 261 I + ++ NNP+ +++K IN+E + N ERAFL ++DGSC I G+ + ++F Sbjct: 310 IIGVTSNKNNPEISQILKNINNEKSQIMANIERAFLQKIDGSCTMPIGGYTKFSKNKIFF 369 Query: 262 YGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 I+ +G +++ + D I +AA+ I+ Sbjct: 370 NAIINDINGLENYKIKVVRHLNDLDGIADEAAEKIKEKIG 409 >gi|226478112|emb|CAX72749.1| hydroxymethylbilane synthase [Schistosoma japonicum] Length = 413 Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats. Identities = 91/301 (30%), Positives = 142/301 (47%), Gaps = 27/301 (8%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + R+G+R S LAL S L P ++ ++T GD I + L++IG K Sbjct: 6 SQHAVRVGSRRSNLALLQTEMAISLLKVQK--PHIMFEVVEIATVGDEILDVPLSKIGDK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119 LFT+E+EK L+ GE+D VHS KD+P+ L GL + R DV + Sbjct: 64 SLFTKELEKSLLVGEVDLVVHSLKDVPSVLPTGLVLGCVFGRSSPEDVVLMAPHNRGMKL 123 Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-------------- 164 DL + + +GTSS+RR A L+R + I RG + TRL KL+ Sbjct: 124 SDLPVGATVGTSSIRRVATLIRKYPHLKFISIRGNLNTRLAKLDTPSNLQKQCCTGNQSL 183 Query: 165 KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224 A++LA AG++R+ I ++ + D + QGA+ E NN +L+ +I+ E Sbjct: 184 SYDALILAKAGVERMGWVDRIDQV--LSDSFYAVSQGALACECLQNNTFIMDLLSLIHDE 241 Query: 225 DTWDSVNCERAFLAELDGSCKSAIAGFAYC------KGSTLYFYGIVLASDGKIFHEVSR 278 + + ER+ + +LDG C I+ + K S L + +L+ DG E S Sbjct: 242 SSALTAIAERSLMHQLDGGCSIPISVRSDLTLKEDFKSSKLTLHANILSVDGVKSVERSA 301 Query: 279 N 279 + Sbjct: 302 S 302 >gi|284047314|ref|YP_003397654.1| porphobilinogen deaminase [Conexibacter woesei DSM 14684] gi|283951535|gb|ADB54279.1| porphobilinogen deaminase [Conexibacter woesei DSM 14684] Length = 314 Score = 171 bits (434), Expect = 9e-41, Method: Composition-based stats. Identities = 98/295 (33%), Positives = 142/295 (48%), Gaps = 17/295 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RIGTR S LAL A S L D + +IP++T GDR +G Sbjct: 1 MS--VLRIGTRASALALVQAEHVASLLRD----GGAQVEVIPITTSGDRGR-----LLGD 49 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 K + +E+E L++ E+D AVHSAKD+P +L G ++ R D RD A SL+ Sbjct: 50 KSRWVKELEAALLADEVDVAVHSAKDVPAELPDGFVLAGVPARADARDALC--GAASLEQ 107 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L +V+GTSSLRR A L R D+ V+ RG ++TRL KL + +A AI+LA AG++RL Sbjct: 108 LPDGAVVGTSSLRRAAELRALRPDLGVVALRGNVDTRLRKLADGQAAAIVLAVAGLERLD 167 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + ++ P+PGQGA+ +ET ++ +A+ I D + ERA + L Sbjct: 168 RG--AAIGAVLDQLVPAPGQGALALETRADDDRARAAAAAITDADAAACLAAERALVRRL 225 Query: 241 DGSCKSAIAGFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGNRC-DAINIGRDAA 293 +C + + A L V DG + + D G A Sbjct: 226 GATCHTPLGAHAVRTADGGLRLRSFVGLPDGSAWLRDELSAAAGIDPETFGVAAG 280 >gi|150020602|ref|YP_001305956.1| porphobilinogen deaminase [Thermosipho melanesiensis BI429] gi|149793123|gb|ABR30571.1| porphobilinogen deaminase [Thermosipho melanesiensis BI429] Length = 279 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 81/249 (32%), Positives = 128/249 (51%), Gaps = 8/249 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+GTR S LAL + L ++ +P + I P+ TKGDR + +IGGKG+F Sbjct: 2 KIRVGTRKSKLALIQTQLVVNKLKEL--LPNIDFEITPVVTKGDR-LKTPIDKIGGKGVF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +IEK ++ ++D A+HS KD+P+K+ L +++ L RE DVFI ++ +L Sbjct: 59 VSDIEKLILDDKLDIAIHSMKDLPSKIPDKLFLTSVLKRECPNDVFIGK--ENFFNLKKG 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGTSS RR + R DI ++ RG ++TR+ K+ + I++A AG+ RL + Sbjct: 117 AKIGTSSKRRALQINMLRPDIEIVPIRGNVDTRIKKI--GELDGIVIAAAGVIRLGLKDK 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV-INHEDTWDSVNCERAFLAELDGS 243 I + E P+P QG + +E K E +K I T ER L+ L+ Sbjct: 175 ITNLFEFEKIVPAPCQGILALEFSEKFLKPFEEIKDVIVDPKTEVETQIERKILSLLNFD 234 Query: 244 CKSAIAGFA 252 C + + Sbjct: 235 CNTPFGFYC 243 >gi|227496731|ref|ZP_03927005.1| porphobilinogen deaminase [Actinomyces urogenitalis DSM 15434] gi|226833762|gb|EEH66145.1| porphobilinogen deaminase [Actinomyces urogenitalis DSM 15434] Length = 402 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 90/380 (23%), Positives = 147/380 (38%), Gaps = 77/380 (20%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEI 58 M R+GTR S LAL + L + + ++P+ T+GD L+++ Sbjct: 1 MS--TVRLGTRGSALALTQSGLVARMLEQAAALAGQELHVELVPVRTRGDVDP-TALSQL 57 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ-S 117 GG G+F + + L++GE D AVHS KD+PT + GL+I+A RED RDV + A Sbjct: 58 GGVGVFATALREALLAGECDLAVHSYKDLPTAAVPGLRIAAVPAREDPRDVLCTRAATLG 117 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--------------NN 163 L DL + +GT S RR A LL R D++++ RG + TRL ++ Sbjct: 118 LHDLPAGARVGTGSPRRSAQLLAQRPDLTIVPIRGNVPTRLARVVGSVVSADGPMGATAE 177 Query: 164 NKAHAILLAYAGIKRLKKEKVIKEI---------------------------LNIEDFPP 196 A +LA +G++RL E + P Sbjct: 178 PDLDAAILALSGMRRLGLEDYASQPLAARCGARSQVEVQGIPDGGSAAGSPATTEPWMLP 237 Query: 197 SPGQGAICIETH----VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252 + QGA+ +ET P + +++ T + ER+ + L C + + A Sbjct: 238 AAAQGALAVETRDRVSCELPVLTVALALVDDPVTRACADAERSLMRCLAAGCAAPVGALA 297 Query: 253 Y---CKGS-----------------------TLYFYGIVLASDGKIFHEVSRNGNRCDAI 286 G + +V + DG S G +A Sbjct: 298 RPLDVAGEPAAGRDLPTEPGTALEPGPDQAPAICLEALVASLDGTQLRRASATGTLEEAE 357 Query: 287 NIGRDAAQYIRFISNKNVFN 306 ++GR A+ + + + Sbjct: 358 DLGRCVAERLLADGAAQITD 377 >gi|86739201|ref|YP_479601.1| porphobilinogen deaminase [Frankia sp. CcI3] gi|86566063|gb|ABD09872.1| hydroxymethylbilane synthase [Frankia sp. CcI3] Length = 395 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 91/344 (26%), Positives = 141/344 (40%), Gaps = 59/344 (17%) Query: 13 SPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKL 72 S LALA + ++L + ++P+ T GDR + +++IGG G+F + L Sbjct: 49 SALALAQSGTVAATLRARV---GCAVELVPIVTAGDRSSGE-ISQIGGTGVFVSALRDAL 104 Query: 73 ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSL 132 +SGEID AVHS KD+PT GL ++A PR D RDV ++ + + L +L + I T S Sbjct: 105 LSGEIDLAVHSLKDLPTATPPGLVLAAVPPRADPRDVLVAPSGRRLAELRAGARIATGSP 164 Query: 133 RRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192 RR A L + V+ RG ++TRL K + + A++LA+AG+ RL + + EIL Sbjct: 165 RRAAQLRALGLGLEVVTIRGNVDTRLKKAIDGEVDAVVLAHAGLARLDRLDAVTEILEPT 224 Query: 193 DFPPSPGQGAICIETHVNNPKAQELVKV-------------------------------- 220 P+PGQGA+ IE Sbjct: 225 VMLPAPGQGALAIECTGGAGLVVAGPARALVPAGPGSGPAVGQTGGETWSDGGQPVDTGL 284 Query: 221 -------INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC----------------KGS 257 ++ + +V ERAFLA ++ C + + A Sbjct: 285 AELLRFVLDDASSSVAVRAERAFLAGIEAGCTAPVGALAELLPELAEGAAAEAGGAPPAG 344 Query: 258 TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISN 301 L +V A DG G+ D +G+ A + Sbjct: 345 RLCLRAVVAAPDGSDVLRRDVTGSAVDPEALGQRLADDMLSAGA 388 >gi|221059912|ref|XP_002260601.1| Porphobilinogen deaminase [Plasmodium knowlesi strain H] gi|193810675|emb|CAQ42573.1| Porphobilinogen deaminase, putative [Plasmodium knowlesi strain H] Length = 449 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 93/374 (24%), Positives = 159/374 (42%), Gaps = 71/374 (18%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K IGTR SPLA+ + + R+ L K I + + T GD I ++ + GGK Sbjct: 65 KEIIIGTRDSPLAIKQSEKVRTKLEAYFKKVNKNVKITLKSIKTMGDNILDQKVDLFGGK 124 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI---------S 112 G+FT+E++++LI G++ VHS KD+P +L + +Q+S +L R+ I D F+ Sbjct: 125 GIFTKELDEELIKGKVHICVHSLKDVPMELPEQVQLSCFLKRDTINDAFLSVKYGTLEDM 184 Query: 113 HTAQSLKDLALHSV------------------------------IGTSSLRRKALLLRWR 142 + + + S IGTSSLRR + + Sbjct: 185 NKMKMANKMEEGSYQPKGMSQRVINQNVKRDNYEGDHYDNFIPTIGTSSLRRSSQIKYKY 244 Query: 143 SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR------------------------ 178 +++V + RG I TR+ KL N + AI++A G++R Sbjct: 245 KNVAVKNMRGNINTRIAKLCNGQYDAIIIAKCGLERLTTKKGIRNIIGGKNKVTPKNFLI 304 Query: 179 ------LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 + + + +N P+ QG I + +H ++ +++K IN E N Sbjct: 305 NYNNTEINLTSLHIQQINKRTIYPALCQGIIAVSSHKSDKYISDVLKNINDEKAQIMANI 364 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDA 292 ER+FL +++G+C I G+A + F ++ G+ + V G I A Sbjct: 365 ERSFLYQIEGNCMMPIGGYAKIVNGEIVFNAVINDIHGREKYHVREVGKVESYNEIAVMA 424 Query: 293 AQYIRFISNKNVFN 306 A ++ + FN Sbjct: 425 ATKMKEKIGTHRFN 438 >gi|284166931|ref|YP_003405210.1| porphobilinogen deaminase [Haloterrigena turkmenica DSM 5511] gi|284016586|gb|ADB62537.1| porphobilinogen deaminase [Haloterrigena turkmenica DSM 5511] Length = 380 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 89/362 (24%), Positives = 149/362 (41%), Gaps = 61/362 (16%) Query: 1 MEKK-PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 M + R+ TR S LA A + +L D + + ++ + T GD+I + + +G Sbjct: 1 MRTRGTLRLATRGSTLARRQASLVKEALEDRR----YEVELVTVETTGDQIRDELIHRLG 56 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G F E++++++ G++D AVHS KDMPT+ + L +A R DV I+ +L+ Sbjct: 57 KTGAFVRELDERVLEGDLDGAVHSMKDMPTEQPQDLVTAAVPERGPPGDVLITPDGSTLE 116 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------NNNKAHAI 169 +L + +GTSSLRR+A LL R D+ V RG ++TRL KL ++A Sbjct: 117 ELPDGATVGTSSLRRRAQLLSERPDLEVEPLRGNVDTRLEKLLAPSLQEEHQERSEADKE 176 Query: 170 LLAYAG--------------------------------------------IKRLKKEKVI 185 AG ++R + Sbjct: 177 RKGNAGDDDYEPEYDRTVDEWFDDLSELERQAMEREVETEYDAIVLAQSGLERSGLAHSV 236 Query: 186 KEILNIE-DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 F P+PGQGA+ + T + A+++ I+ + ER LAEL G C Sbjct: 237 DYRELPTGTFVPAPGQGALAV-TARDGETARDIQSAIDFPRSRVETTVERTILAELGGGC 295 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 + + +A +G ++ V DG+ E SR+ R+ A+ + + Sbjct: 296 IAPVGIYAVVQGEYVHATVNVFDRDGEESVEGSRDLPVEAHAEAAREFARDLADRGAAEL 355 Query: 305 FN 306 Sbjct: 356 IE 357 >gi|168334266|ref|ZP_02692463.1| uroporphyrinogen III synthase/methyltransferase [Epulopiscium sp. 'N.t. morphotype B'] Length = 785 Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 99/300 (33%), Positives = 145/300 (48%), Gaps = 11/300 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 F +GTR S LA+A + + + + P I + TKGD IT L +IG KGLF Sbjct: 4 TFTVGTRGSALAIAQTKQIIALMQQQN--PDATFSIKIIQTKGDAITEIPLDKIGDKGLF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT--AQSLKDLA 122 EIE +L+SG+ID A+HS KD+P+ + GL I+ R +D + SL + Sbjct: 62 VSEIEHQLLSGQIDIAIHSYKDLPSNITPGLIIAHPPARAPRQDALVLRDGTISSLDAIP 121 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 ++ I T SLRRK LL R D++V+ RG I+TRL KL + I++A AG+ RL Sbjct: 122 RNATIATGSLRRKLQLLHHRPDLNVVPIRGNIDTRLKKL--SDVDGIVIAAAGLARLDLA 179 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I + + P+ QGAI I+ + A I+ T V+ ERAFL+ +DG Sbjct: 180 HKISYLFPEDILVPAAAQGAIAIQCRATDTTAIACANSISDSTTALEVSAERAFLSAIDG 239 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC---DAINIGRDAAQYIRFI 299 SC + A+ T+Y I + F S + A +G A+ + Sbjct: 240 SCHIPVGATAHLIDDTMYLKAIFGNT--TTFITHSAEAHVTTEIQAQALGIATARSVLAQ 297 >gi|68068433|ref|XP_676126.1| porphobilinogen deaminase [Plasmodium berghei strain ANKA] gi|56495675|emb|CAH94424.1| porphobilinogen deaminase, putative [Plasmodium berghei] Length = 383 Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 96/358 (26%), Positives = 168/358 (46%), Gaps = 54/358 (15%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGG 60 K IGTR SPLA+ + + + L+ K N+++ P+ T GD+I ++T+ GG Sbjct: 15 NKEIIIGTRNSPLAIKQSEKVKKKLLTYFKKINENINVILKPIKTTGDKILDKTVGSFGG 74 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG+FT+E++++LI +D VHS KD+PT L + +S +L R+ I D F+S +SL+D Sbjct: 75 KGIFTKELDEELIKNNVDICVHSLKDIPTVLPDNIHLSCFLKRDTINDAFLSIKYKSLRD 134 Query: 121 LAL------------------------HSVIGTSSLRRKALLLRWRSDISVIDFRGKIET 156 + I TSSLRR + + ++ + RG I T Sbjct: 135 INKELSQKNITNNISSSSHVIDKDIDLPRTIATSSLRRTSQIRYKYKNLKLKFIRGNINT 194 Query: 157 RLNKLNNNKAHAILLAYAGIKR----------------------------LKKEKVIKEI 188 R+ KL N +I++A+ G++R + ++ + Sbjct: 195 RIAKLFNETFDSIIIAFCGLERLISKKVLGQIMKNNIKSKPYIINYKDISIDLSRLNIQK 254 Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248 LN P+ QG I + ++ NN + +++K IN+E + + ER FL ++DGSC I Sbjct: 255 LNTNIMCPALCQGIIAVTSNKNNSEISQILKNINNEKSQIMGSIERTFLHKIDGSCTMPI 314 Query: 249 AGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 G+ + ++F I+ +G +++ + + I +AA+ I+ FN Sbjct: 315 GGYTKFSKNKIFFNAIINDINGLENYKIKVVRHLNNLDGIADEAAEKIKEKIGIEQFN 372 >gi|291518806|emb|CBK74027.1| porphobilinogen deaminase [Butyrivibrio fibrisolvens 16/4] Length = 239 Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats. Identities = 83/238 (34%), Positives = 115/238 (48%), Gaps = 7/238 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 ++GTR S LAL L P + ++ + T GD +R L +IG KGLF Sbjct: 3 IKVGTRGSKLALVQTNYVIEQLKKA--FPENEYEVVVIKTTGDIDQSRPLDQIGSKGLFV 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EIE+ L++ EI AVHS KDMP+K KG + RED RDV I S+++L ++ Sbjct: 61 DEIERALVADEIQLAVHSMKDMPSKPAKGCVFAKSWTREDARDVIIFREVDSIEELPKNA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA-----HAILLAYAGIKRLK 180 I T S RR LL R D+ + RG I+TRL KL + I+LA AG+ RLK Sbjct: 121 KIATGSKRRSYQLLSLRPDLELCPIRGNIDTRLRKLVEGNSDGTILDGIVLAAAGLNRLK 180 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 +IL +++ PSP QG + IE + + S FL Sbjct: 181 ISLDHYQILEVDEMIPSPAQGTLAIELNEKIKSFLIWSIHYQMKRQIISHIWREVFLK 238 >gi|167737626|ref|ZP_02410400.1| porphobilinogen deaminase [Burkholderia pseudomallei 14] Length = 246 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 90/236 (38%), Positives = 137/236 (58%), Gaps = 2/236 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I+ +L+++D P+ GQGA+ IE + ++ + +V ERA L Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRAL 246 >gi|295395608|ref|ZP_06805802.1| exopolyphosphatase [Brevibacterium mcbrellneri ATCC 49030] gi|294971627|gb|EFG47508.1| exopolyphosphatase [Brevibacterium mcbrellneri ATCC 49030] Length = 821 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 86/305 (28%), Positives = 141/305 (46%), Gaps = 13/305 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LA + + + + I+ + T+GD L +GG G Sbjct: 498 TRTVRLGTRRSNLARSQSVGVAQDIAAHTGW---RVEIVEVVTEGDVNM-TPLANMGGTG 553 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F + + L+SG+ID AVHS KD+PT G+ ++A PR D DV ++ + L Sbjct: 554 VFVSAVRQALLSGKIDIAVHSLKDLPTAQAPGITLAAVPPRVDPSDVLVARDGLTFDTLP 613 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +V+GT S RR A + R D+ + RG ++TR+ + + + A++LA AG++RL + Sbjct: 614 QGAVVGTGSPRRAAQMRAARPDLDIRGVRGNVDTRIKYVTDGRLDAVVLAAAGMRRLGRL 673 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV-------INHEDTWDSVNCERA 235 + + L E P+PGQGA+ IE N + I+ E T+ +V ERA Sbjct: 674 AEVSQTLTTELMLPAPGQGALAIECRAENADREPFDAKLRSGLLAIHDETTYRAVVAERA 733 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK--IFHEVSRNGNRCDAINIGRDAA 293 L+ C + I A ++ ++ GK N AI++G A Sbjct: 734 ILSRAQAGCSAPIGALANVTERSIELSAVMADDAGKLARITRSVANTGVNAAIDVGTQIA 793 Query: 294 QYIRF 298 + Sbjct: 794 DELLD 798 >gi|268324707|emb|CBH38295.1| porphobilinogen deaminase [uncultured archaeon] Length = 290 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 89/297 (29%), Positives = 145/297 (48%), Gaps = 13/297 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR S LAL + L ++ I + + GD +T+R L E+ G+F Sbjct: 1 MIVGTRGSNLALVQTKKVCERLSEL----GVECEIKTVQSLGDVMTDRGLYEMPTIGVFV 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++++ L+ +ID AVHS KDMP++ + L SA LPR+ D +S L D+ + Sbjct: 57 KKLDMMLLDAKIDIAVHSMKDMPSEREEELDTSAVLPRDSPYDALVSRY--RLDDMPEGA 114 Query: 126 VIGTSSLRRKALLLRWRSDI----SVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 VIGTSS+RR+ L + + ++ D RG ++TR+ K + +++LA AG +RLK Sbjct: 115 VIGTSSVRRRYQFLNYVGERGVKVTIKDIRGNVDTRIAKFRRGEYDSVILAEAGFERLKL 174 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + E L+ + F PSP QG I + + ++ E++K I+ +T E L + Sbjct: 175 DIE-YERLDRDPFVPSPRQGIIAVVARRGSKES-EILKQIDDSETRIEAEVEEEVLKVIG 232 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 G C + A KG ++ V ASD + E G + R+ AQ + Sbjct: 233 GGCSLPVGVHATAKGGSVELAVYVAASDVRYKLEKVVLGK-DYYMEETRELAQKFKS 288 >gi|167900391|ref|ZP_02487792.1| porphobilinogen deaminase [Burkholderia pseudomallei 7894] Length = 245 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 89/235 (37%), Positives = 136/235 (57%), Gaps = 2/235 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 I+ +L+++D P+ GQGA+ IE + ++ + +V ERA Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRA 245 >gi|315650219|ref|ZP_07903294.1| hydroxymethylbilane synthase [Eubacterium saburreum DSM 3986] gi|315487576|gb|EFU77884.1| hydroxymethylbilane synthase [Eubacterium saburreum DSM 3986] Length = 309 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 91/313 (29%), Positives = 144/313 (46%), Gaps = 26/313 (8%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+ RIGTR S LALA ++ + P I +P++T GD+ + +L EIGGKG Sbjct: 4 KEIIRIGTRKSALALAQTKLVGDAVK--NSFPHIKIEYVPMNTIGDKRLDISLQEIGGKG 61 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ----SL 118 LFT+E+E+ LI G+ID A+HSAKD+P + L++ L R +RDV + + Sbjct: 62 LFTKELEEALIKGDIDLAIHSAKDLPLEFDNRLKLMPVLKRGAVRDVLVVKNDCPVDLQI 121 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 KDL IGTSS RR + +I ++ RG + TR+ K+ + ++LA AG+ R Sbjct: 122 KDLPRGFRIGTSSKRRSEQAMLLNHNIKIVPIRGNVLTRIGKIFSGDTDGVILARAGLDR 181 Query: 179 LKKEKVIKEILN------------IEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDT 226 L + + D P+P QG +C + + E++K I ED Sbjct: 182 LLADTNCAGECDKILQKVNITDIKETDILPAPAQGILCGQ--YASDYISEVLKKIQDEDC 239 Query: 227 WDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAI 286 N ER +L+ L+ C ++ + +GK S + D + Sbjct: 240 NILFNAERKYLSVLEADCHTSAGIYIKKDRDNYSIKAYF---EGKYQIAYSDSKGLFDMV 296 Query: 287 NIGRDAAQYIRFI 299 + A ++ Sbjct: 297 E---NTANKLKRK 306 >gi|88854547|ref|ZP_01129214.1| porphobilinogen deaminase [marine actinobacterium PHSC20C1] gi|88816355|gb|EAR26210.1| porphobilinogen deaminase [marine actinobacterium PHSC20C1] Length = 290 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 141/292 (48%), Gaps = 11/292 (3%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 +A +L IIP+ST+GDR + +L+ IGG+G+F + L++GE Sbjct: 1 MAQTTTVARALESKT---GVETEIIPISTQGDR-STESLSTIGGQGVFANALRDALLAGE 56 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 D VHS KD+PT + GL I+A R D RDV + +L+ L + +GT S RR+A Sbjct: 57 CDVVVHSLKDLPTAEVPGLTIAAVPKRADERDVVCARDGLTLETLPAGARVGTGSPRRQA 116 Query: 137 LLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPP 196 L D+ V+D RG I++RL+K+ + A++LA AG+ R + + E L I +P Sbjct: 117 QLRSLYPDLEVVDLRGNIDSRLDKVTDGHLDAVILAAAGLARAGRSDAVTEHLGIAGWPT 176 Query: 197 SPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG 256 +PGQGA+ IET K V++H+ + + ER LA LD C + + A Sbjct: 177 APGQGALAIETRTGEEKL---AAVLDHKPSRTKTDAERYVLAFLDAGCSAPLGAHAVIDD 233 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCD----AINIGRDAAQYIRFISNKNV 304 L+ V A DG + S D A + A + ++ Sbjct: 234 GLLFLDARVYALDGSRYLTSSHALYVNDVEDPAREAAQRVADELLAQGAGDL 285 >gi|108804800|ref|YP_644737.1| porphobilinogen deaminase [Rubrobacter xylanophilus DSM 9941] gi|123069014|sp|Q1AUK3|HEM3_RUBXD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|108766043|gb|ABG04925.1| porphobilinogen deaminase [Rubrobacter xylanophilus DSM 9941] Length = 305 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 89/300 (29%), Positives = 150/300 (50%), Gaps = 7/300 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +GTR SPLALA A + L + + + T DR + L+ I + +FT Sbjct: 5 LVLGTRGSPLALAQAEACAAGLRAA----GFAVELRRIRTTSDRRPDDPLSVIDQRDVFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 ++++ L++GE+D AVHS KD+PT++ +G+ ++A R D D +S + L + Sbjct: 61 RQLDEALLAGEVDLAVHSMKDVPTEVPEGIVLAAVAGRADPSDALVSEGGWGVDGLPEGA 120 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 + TSSLRR+A LL R D+ V++ RG ++TR+ K+ A A++LA AG+ RL E V Sbjct: 121 RVATSSLRRRAQLLHRRPDLRVVEIRGNVDTRIRKMRAGAAEAVVLARAGLVRLGLE-VP 179 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ + P+ GQGA+ + +P+ +E+ + +N V ERA L L+G C+ Sbjct: 180 HAVIPHDVLLPAVGQGALAVAVRRGDPRLEEIRRALNDPAAEREVAAERALLRALEGGCR 239 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + A G + G+V++ DG G + + R A + + Sbjct: 240 VPVGARAVAGGRGVLLRGVVVSPDGAALCGGEERGEEPEEVG--RRLAARLLERGAAGIL 297 >gi|291295782|ref|YP_003507180.1| porphobilinogen deaminase [Meiothermus ruber DSM 1279] gi|290470741|gb|ADD28160.1| porphobilinogen deaminase [Meiothermus ruber DSM 1279] Length = 300 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 79/265 (29%), Positives = 139/265 (52%), Gaps = 12/265 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LAL A + L + + ++ + T+GDR +R ++ G+G FT Sbjct: 4 VRIATRGSRLALWQAGWVQQQLERL----GAQVELVVVETQGDRE-SRPFAQMQGQGFFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA--- 122 + ++ +++ E D AVHS KD+P+ +GL+I+A RED R++ + + Sbjct: 59 KAVQDAVLNWEADLAVHSFKDLPSARPEGLEIAAVPKREDPRELLLVRPEALDEAAPGLP 118 Query: 123 --LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 ++ GTS+ RR+A L + R D+ + + RG + TR++KL + AILLAYAG+KRL+ Sbjct: 119 LRSGALAGTSAARRQAQLRQLRPDLGLKELRGNVPTRVDKLRCGEYDAILLAYAGLKRLE 178 Query: 181 KE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + + ++L P+P QGA+ +E ++ + + L++ ++ +V ER + Sbjct: 179 LDLSGLYTQVLPTTVLVPAPAQGALALECRSDDHRLKALLQPLDDPQARRTVEAERGLMQ 238 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYG 263 +L G C+ A+ A L Sbjct: 239 KLAGGCQLALGALAQAGPQGLMLLA 263 >gi|291523525|emb|CBK81818.1| porphobilinogen deaminase [Coprococcus catus GD/7] Length = 799 Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats. Identities = 94/314 (29%), Positives = 143/314 (45%), Gaps = 32/314 (10%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + ++ V P I I TKGDR +++L+ G KG FT+E+E ++ G Sbjct: 1 MVQTEMAAEAIKKV--FPSIEIEIAGFETKGDRHLDKSLSAFGSKGAFTKELEGAMLDGR 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI--SHTAQSLKDLALHSVIGTSSLRR 134 ID AVHSAKD+P +L +GL + A L R D RDV++ +++ +V+GT SLRR Sbjct: 59 IDLAVHSAKDLPVELPEGLTVGAVLKRGDSRDVWVSLRREFSIIEECKEKTVVGTGSLRR 118 Query: 135 KALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEIL----- 189 + + + + D RG + TRL KL++ I+LA AG+KRL E Sbjct: 119 ALQIQQICPGVDIRDIRGNVPTRLKKLSDGMYDGIILAAAGLKRLGYLSEDCETEGSFEA 178 Query: 190 ----------NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E F P+ GQG I +ET ++ ++ I+ EDTW ER+FL Sbjct: 179 EEQTFFYEILSKEQFLPAAGQGIIALET--RQKDCEDCMQAIHDEDTWQMFLTERSFLRA 236 Query: 240 LDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG--------NRCDAINIGRD 291 + G C A A G + DG E + G +R A+++G Sbjct: 237 IGGGCNEAAAVDVRMDGQKVSVRARYAG-DGLHMKEKTVTGTRCGNIEEDRKLAVSLGEQ 295 Query: 292 AAQYIRFISNKNVF 305 A + + K Sbjct: 296 MAARL--QNGKVYL 307 >gi|167814759|ref|ZP_02446439.1| porphobilinogen deaminase [Burkholderia pseudomallei 91] Length = 240 Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats. Identities = 88/230 (38%), Positives = 135/230 (58%), Gaps = 2/230 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 I+ +L+++D P+ GQGA+ IE + ++ + +V ER Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAER 240 >gi|311895212|dbj|BAJ27620.1| putative porphobilinogen deaminase [Kitasatospora setae KM-6054] Length = 304 Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats. Identities = 95/303 (31%), Positives = 133/303 (43%), Gaps = 10/303 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL---TEIGGKG 62 +G+R S LA A E + L + P + GD L +E GG Sbjct: 4 LVVGSRASQLARAQVKEFLAPLRA--RFPEVAFRHRVILEDGDLDRKSDLRAVSERGGGS 61 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 F L+ E+D VHS KD+PT GL + PR D+RD L L Sbjct: 62 AFAGRQAAALLDREVDVVVHSLKDLPTADPDGLLLLPSPPRADVRDAL---CGAPLAGLP 118 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +GTS+ RR A LL R D++ RG + TRL +L A++LA AG+ RL ++ Sbjct: 119 TGARVGTSAARRIAQLLYVRPDLAPERIRGNVPTRLTRLRT--LDAVVLAAAGLHRLGRD 176 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDG 242 I E+L + FPPSPGQGA+ I+ ++ A+EL+ T V ERA LAEL G Sbjct: 177 GEIAELLPLAQFPPSPGQGALGIQVRADDAMARELLAGTGDPVTDAEVRAERAMLAELHG 236 Query: 243 SCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNK 302 C + A L +G V G E +G +GR A + + Sbjct: 237 GCSVPVGAHATTADGILTLHGQVTTPRGTRQIEARLSGTSAAPEKLGRAVAGLLLDQDAE 296 Query: 303 NVF 305 + Sbjct: 297 CLL 299 >gi|1749684|dbj|BAA13899.1| unnamed protein product [Schizosaccharomyces pombe] Length = 335 Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats. Identities = 87/315 (27%), Positives = 143/315 (45%), Gaps = 19/315 (6%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG---KGLF 64 IGTR S LA+ H R L + P II T GD I ++ E K L+ Sbjct: 9 IGTRKSKLAVIHQNY-REELEKHN--PHLEFPIISRDTIGDEILSKAWLEFKRQLAKSLW 65 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH---TAQSLKDL 121 T E+E L++ + VHS KD+P++ + I+ R D + +++ DL Sbjct: 66 TRELEALLVTNQCRILVHSLKDLPSENARWYGIACIPKRSCPLDAIVFKAGSHYKTVADL 125 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRL 179 SV+GTSS+RR+ALL R + +D RG + TRL KL+ +++ ++LA AG+ RL Sbjct: 126 PPGSVVGTSSIRRRALLARNFPHLRFVDIRGNVGTRLAKLDAPDSQFDCLVLAAAGLFRL 185 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + I ++L + GQGA+ +E ++ + E++K + H++T + ERA + Sbjct: 186 GLKDRIAQMLTAPFVYYAVGQGALAVEVRADDKEMIEMLKPLQHQETLYACLAERALMKR 245 Query: 240 LDGSCKSAIAGFAYC-----KGSTLYFYGIVLASDGKIFHEVS---RNGNRCDAINIGRD 291 L G C I + G VL++DG + + +A +G Sbjct: 246 LQGGCAIPIGVQTDVLAISNSSYRISLLGTVLSADGLRAAFGNAEAVVSSEEEAEELGIT 305 Query: 292 AAQYIRFISNKNVFN 306 A + + Sbjct: 306 VALALLKNGAGPILE 320 >gi|319440758|ref|ZP_07989914.1| hypothetical protein CvarD4_03233 [Corynebacterium variabile DSM 44702] Length = 336 Score = 165 bits (417), Expect = 9e-39, Method: Composition-based stats. Identities = 89/337 (26%), Positives = 139/337 (41%), Gaps = 39/337 (11%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITN--RTLTEI 58 M + IGTR S LA R +L+D + + T GD ++ I Sbjct: 1 MT-RTLLIGTRASALASTQTGMVRDALVDNGATADLHF----VHTPGDASQKAQTPVSRI 55 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G G+FTE + L +GE D AVHS KD+PT PR D R+V +SH +L Sbjct: 56 G-VGVFTETLRNALAAGECDVAVHSFKDLPTAPDPRFIA-VVPPRVDPREVLVSHGNLTL 113 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK---------LNNNKAH-- 167 ++L + IGT + RR + + R D+ I RG I+TR+ + + Sbjct: 114 RELPTGAKIGTGAPRRVSQIRAVRPDVECISIRGNIDTRMGRAGDGTTSTVVEGGPGDLA 173 Query: 168 AILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227 A++LA AG++R+ E + + D P+P QGA+C+E ++ +A V ++ + Sbjct: 174 AVVLARAGLERVGHLDHAAETVAVTDIMPAPAQGALCVEVRADDAEAVAAVLGLDDPASH 233 Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFH--EVSRNGN 281 ER LA L+ C + + ++ + L A DG E S + Sbjct: 234 ARAVAERGVLATLEAGCTAPVGAYSEFGTAEDAAILTLQAGAFALDGSTRVVREASVTID 293 Query: 282 RCD-------------AINIGRDAAQYIRFISNKNVF 305 D A +GR Q + V Sbjct: 294 LSDVGADPLHPRWRDAARELGRTVGQKLLDAGAAEVI 330 >gi|119963156|ref|YP_948463.1| porphobilinogen deaminase [Arthrobacter aurescens TC1] gi|119950015|gb|ABM08926.1| porphobilinogen deaminase [Arthrobacter aurescens TC1] Length = 332 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 96/317 (30%), Positives = 149/317 (47%), Gaps = 33/317 (10%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL +T L V P + ++ + T+GD + +L+++GG G+F Sbjct: 2 TVRIGTRASKLALTQTQQTADQLAAVGGFP---VELVHIKTEGD-VKTGSLSQMGGTGVF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L++ D AVHS KD+PT GL I+A R D+RDV + +L L Sbjct: 58 VAALRDALLADACDVAVHSLKDLPTGAALGLSIAATPKRVDVRDVLCARDGMTLAQLPGG 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--------------NNNKAHAIL 170 + +GT S RR A L R DI V+D RG ++TRL ++ + A++ Sbjct: 118 AKVGTGSPRRAAQLRAARPDIEVLDIRGNVDTRLGRVPGLPGNTTDEVVQGKSCDLDAVV 177 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV------------ 218 LA AG++R+ + + E + P+PGQGA+ IE + + Sbjct: 178 LAAAGLERMDRLDTVSEFFESDVMLPAPGQGALAIECRTEDAPSVAGSAEGADGVLAQAL 237 Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR 278 +N DT +V ERA LA L+ C + + +A+ KGS L+ +V A DG + Sbjct: 238 AALNDHDTRLAVTAERAVLARLEAGCAAPVGAYAFRKGSMLHLEAVVCAVDGTKTVREKK 297 Query: 279 -NGNRCD--AINIGRDA 292 + A +G + Sbjct: 298 ATDGLTEVGATLLGIEV 314 >gi|15920398|ref|NP_376067.1| porphobilinogen deaminase [Sulfolobus tokodaii str. 7] gi|25453026|sp|Q976H1|HEM3_SULTO RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|15621180|dbj|BAB65176.1| 294aa long hypothetical porphobilinogen deaminase [Sulfolobus tokodaii str. 7] Length = 294 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 88/294 (29%), Positives = 143/294 (48%), Gaps = 10/294 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI R S L+ + L + I + TK D N L+++G KG+F Sbjct: 3 IRIAARGSKLSRIQVMMVENYLHKL----GIETEFIEIKTKADLFQNEPLSKLG-KGVFE 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+ + ++ + D AVHS KD+ T++ + L+I A LPR+ D+ IS ++L +L +S Sbjct: 58 KEVNQAVLDNKADVAVHSMKDILTEISENLEIYAVLPRDPPFDILISR--KNLFNLEPNS 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +IGTSS+RRK L +R+D+++ D RG I+TRL K + I++A A I RLK E+V Sbjct: 116 IIGTSSIRRKNFLTFYRNDLNIKDLRGNIDTRLKKYFEGQYDGIIIAEASIYRLK-EQVQ 174 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 L+ F P QG I + + +++ IN +DT + ER L+ + G C Sbjct: 175 YYRLDPHLFTPEANQGIIVVIGRKKDETIKKIFNEINDKDTLEIAIAERKALSIVGGGCH 234 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S I + F+GI+ +S G+ + + G + Sbjct: 235 SPIGVYFEKYDKD--FHGIISSSFGRKKITIEEYFHNMTPYEAGELLGKRFLEE 286 >gi|116671313|ref|YP_832246.1| porphobilinogen deaminase [Arthrobacter sp. FB24] gi|116611422|gb|ABK04146.1| hydroxymethylbilane synthase [Arthrobacter sp. FB24] Length = 332 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 92/300 (30%), Positives = 145/300 (48%), Gaps = 30/300 (10%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LAL +T L + P + ++ + T GD + +L+++GG G+F Sbjct: 2 TVRIGTRASKLALTQTQQTADQLAAIGGFP---VELVHIRTDGD-VLTGSLSQMGGTGVF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + + L+ + D AVHS KD+PT GL ++A R D+RDV + L DL Sbjct: 58 VAALREALLRDDCDVAVHSLKDLPTGAAPGLNLAATPKRVDVRDVLCARDGFKLADLPQG 117 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL--------------NNNKAHAIL 170 + +GT S RR A L R D+ V+D RG ++TRL ++ + A++ Sbjct: 118 ARVGTGSPRRAAQLRAARPDLDVVDIRGNVDTRLGRVPGLPGNTTDAVVLGKSCDLDAVV 177 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ------------ELV 218 LA AG++R+ + + E L + P+ GQG++ IE + + + + Sbjct: 178 LAAAGLERIGRLDTVSEYLETDVMLPAAGQGSLAIECRTADAPRRTGSTEGSQGPLAQAL 237 Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR 278 ++ DT +V ERA LA L+ C + + +A+ KGS LY V A DG R Sbjct: 238 AALDDTDTRLAVTAERALLARLEAGCAAPVGAYAFRKGSMLYLEAAVCAVDGSATVRDKR 297 >gi|152964587|ref|YP_001360371.1| porphobilinogen deaminase [Kineococcus radiotolerans SRS30216] gi|151359104|gb|ABS02107.1| porphobilinogen deaminase [Kineococcus radiotolerans SRS30216] Length = 326 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 92/301 (30%), Positives = 144/301 (47%), Gaps = 13/301 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M +P R+GTR S LA + L + ++ ++T+GD L +IGG Sbjct: 1 MT-RPLRLGTRRSALATTQSSWVADLLRR----GGSPVELVEITTRGDVDR-APLAQIGG 54 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + L++GE+D AVHS KD+PT GL ++A RED RDV ++ +L D Sbjct: 55 TGVFVSALRDALLAGEVDLAVHSLKDLPTSAADGLALAAVPGREDPRDVLVAAGGATLAD 114 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT S RR+ALLL R D+ V+ RG ++TR+ + A++LA AG+ R Sbjct: 115 LPRGARVGTGSPRRRALLLALRPDLDVVAVRGNVDTRIGFATGGELDAVVLAAAGLARTG 174 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + E+ E F P+PGQGA+ +E ++ + + ++ +V ER LA L Sbjct: 175 RLHEASELFAPEVFVPAPGQGALAVECRADDAEVLAALAALDVPAVRWAVAAERQVLASL 234 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCD---AINIGRDAAQYIR 297 + C + + A G L+ V DG + D A +G A + Sbjct: 235 EAGCSAPVGAHAA--GGVLHV--AVEDPDGALVRRAVPAAGLDDEGAARRLGASVAADLL 290 Query: 298 F 298 Sbjct: 291 E 291 >gi|167823214|ref|ZP_02454685.1| porphobilinogen deaminase [Burkholderia pseudomallei 9] Length = 233 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 85/220 (38%), Positives = 130/220 (59%), Gaps = 2/220 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224 I+ +L+++D P+ GQGA+ IE + ++ Sbjct: 191 IRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDH 230 >gi|257387166|ref|YP_003176939.1| porphobilinogen deaminase [Halomicrobium mukohataei DSM 12286] gi|257169473|gb|ACV47232.1| porphobilinogen deaminase [Halomicrobium mukohataei DSM 12286] Length = 377 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 89/357 (24%), Positives = 153/357 (42%), Gaps = 60/357 (16%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+ TR S LAL A +L + + I+ + T GD+I + + +G G F Sbjct: 6 TVRLATRGSDLALRQAATVTETLEAR----GYTVEIVEVETTGDQIRDELIHRLGKTGAF 61 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 ++++++ GE+D AVHS KD+PT+ + L ++ RE DV ++ ++ +L Sbjct: 62 VRSLDEQVVDGEVDAAVHSMKDVPTEQPEELVVAGVPQRESPDDVLVTPDGATVDELPDG 121 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN-----------------------KL 161 + +GTSSLRRKA LL R D+ V RG ++TR+ K+ Sbjct: 122 ATVGTSSLRRKAQLLAERPDLDVQPLRGNVDTRIEKLLAPTLQSEHEERSEAEKEQKEKV 181 Query: 162 NNNKA-------------------------------HAILLAYAGIKRLKK-EKVIKEIL 189 ++ + A++LA AG++R V + L Sbjct: 182 DDEEYEFPYEQDVETWFDGLTEIERQALGREVETAYDAVVLARAGLERAGLLHHVEYQSL 241 Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 F P+PGQGA+ + T ++ A+EL ++H + ER L EL G C + + Sbjct: 242 PTGTFVPAPGQGALAV-TATDDEFARELNDALDHPRSRAETTVERTVLDELGGGCVAPLG 300 Query: 250 GFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 A +GS + VL G+ +R+ + ++ R A + ++ Sbjct: 301 VHAILQGSVIRTTVRVLDQAGEREVAATRDLSADRHVDDARAFAADLAEQGGADLIE 357 >gi|163839970|ref|YP_001624375.1| porphobilinogen deaminase [Renibacterium salmoninarum ATCC 33209] gi|162953446|gb|ABY22961.1| porphobilinogen deaminase [Renibacterium salmoninarum ATCC 33209] Length = 290 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 89/295 (30%), Positives = 151/295 (51%), Gaps = 9/295 (3%) Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLIS 74 +A + L + + ++ + T GD + L+++GG G+F + + +++ Sbjct: 1 MARTQSQLIADQLSAIGGF---EVELVQIRTDGD-VLTGPLSQMGGTGVFVTALREAVLN 56 Query: 75 GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRR 134 G +D AVHS KD+PT G++I+A R ++RD S + +SL +LA + +GT S RR Sbjct: 57 GSVDFAVHSLKDLPTAAAPGMKIAAIPARAEVRDALCSRSNRSLAELATGAKVGTGSPRR 116 Query: 135 KALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDF 194 A L R+DI VID RG ++TRL +L N A++LA AG+ R+ + I E+ + Sbjct: 117 AAQLRAARADIEVIDIRGNVDTRLARLE-NDLDAVVLAAAGLGRIGRSAAISELFDDAVM 175 Query: 195 PPSPGQGAICIETHVNNP-KAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY 253 P+PGQGA+ +ET ++ P + + I+ D+ +V ERA LA L+ C + + FA Sbjct: 176 LPAPGQGALAVETALDVPTELAAALAAIDDADSRLAVTAERALLARLEAGCSAPVGAFAQ 235 Query: 254 CKGSTLYFYGIVLASDGKIFHE-VSRNGNRCD--AINIGRDAAQYIRFISNKNVF 305 KGS L + + DG + A +G + A+ + ++ Sbjct: 236 RKGSMLRLEACICSLDGSRVIRQAKATDGLAEVAATLLGIELAESMLADGAADLL 290 >gi|332186913|ref|ZP_08388654.1| porphobilinogen deaminase [Sphingomonas sp. S17] gi|332012923|gb|EGI54987.1| porphobilinogen deaminase [Sphingomonas sp. S17] Length = 210 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 84/193 (43%), Positives = 121/193 (62%), Gaps = 4/193 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 FR+GTR SPLAL A R++L D I I+P+ T GDR+ +R L EIGGK L+T Sbjct: 4 FRLGTRGSPLALTQAHMVRAALADAQGWDEDAIEIVPIKTTGDRVQDRALAEIGGKALWT 63 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+++ L+ GEID +VHS KD+ T L I+A LPR D+RD I A+++ +L + Sbjct: 64 KELDRALLDGEIDASVHSMKDVETIRPDWLHIAAMLPRADVRDRLI--GAETIAELRPGA 121 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 V+GTSS RR+A LL R D+++ RG ++TRL KL + + A LLA AG+ RL +E + Sbjct: 122 VVGTSSPRRRAQLLSHRPDLTITLLRGNVDTRLAKLASGEMDATLLAAAGLDRLGRE--V 179 Query: 186 KEILNIEDFPPSP 198 + + P+P Sbjct: 180 GHAVPTDQMLPAP 192 >gi|321253441|ref|XP_003192732.1| phorphobilinogen deaminase; Hem3p [Cryptococcus gattii WM276] gi|317459201|gb|ADV20945.1| Phorphobilinogen deaminase, putative; Hem3p [Cryptococcus gattii WM276] Length = 481 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 82/296 (27%), Positives = 124/296 (41%), Gaps = 38/296 (12%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPP-----------------------HNI 38 + F +GTR S LAL L +H + Sbjct: 29 QTNTFILGTRKSNLALVQTGHVADDLRRLHSAAGSKFGETREEGDDAEQGDVPFVHPYTF 88 Query: 39 VIIPLSTKGDRITNRTLTEI-------GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91 I ++T GDR L + K L+T+E+E +LI+G D VHS KD+PT L Sbjct: 89 TIESMTTVGDRNQTTPLHLLSPYSSTQPAKSLWTDELEARLINGHFDMLVHSLKDVPTVL 148 Query: 92 LKGLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVI 148 G +I R D RD + + L+DL +V+GT S+RR A L R ++ Sbjct: 149 KDGCEIGCMAKRHDPRDALVVKQGLPYKRLEDLPDGAVVGTGSVRRVAQLKRAFPNLVFE 208 Query: 149 DFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206 D RG + TR NKL+ + A++LA +G++RL L+ + GQGA+ IE Sbjct: 209 DMRGNLNTRFNKLDNPQSPFSALILAMSGLERLGMAHRATSPLSSPTLMHAVGQGALAIE 268 Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG---FAYCKGSTL 259 +P+ + ++ + H T S ER L L+G C + + Sbjct: 269 IRSTDPRVRNCLRGLGHWQTEWSCGAERGCLRVLEGGCSVPVGVESELVELDEDEI 324 Score = 42.1 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 8/53 (15%), Positives = 19/53 (35%), Gaps = 4/53 (7%) Query: 258 TLYFYGIVLASDGKIFHEVS----RNGNRCDAINIGRDAAQYIRFISNKNVFN 306 L + V ++DG + + A G + A+ +R + + + Sbjct: 386 KLTLHSCVTSTDGTKHVLFTPPPVLVRSYRQAEQFGEECARKLRGMGAGEILD 438 >gi|282857646|ref|ZP_06266861.1| hydroxymethylbilane synthase [Pyramidobacter piscolens W5455] gi|282584522|gb|EFB89875.1| hydroxymethylbilane synthase [Pyramidobacter piscolens W5455] Length = 245 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 82/252 (32%), Positives = 123/252 (48%), Gaps = 11/252 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE----I 58 K R G+R S LALA ++ H P + + ++P++T+GD + +E Sbjct: 1 MKTLRFGSRTSDLALAQTRLVMDAVGRAH--PEYRLELVPIATRGDVDM-KPFSEASDTF 57 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G KGLFT E+E+ L+ G ID AVHS KD+P + L + A R D RDV Sbjct: 58 GIKGLFTRELEEALLDGSIDVAVHSLKDLPAVQDERLPLLACFRRGDPRDVLALPAGAEA 117 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 + ++IG SS RR+ L V RG + TRL KL+ + A++LA AG++R Sbjct: 118 MN---GALIGCSSARRRLQALDLFEGAEVRPVRGNVGTRLRKLDEGQFSALILAAAGLER 174 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + ++++ P+PGQG + + K ++ + I D D ERAF A Sbjct: 175 LGLRARVSRYFSLDEIVPAPGQGILACQ-GRAGDKNEDWLDAIFDPDATDCARAERAFSA 233 Query: 239 ELDGSCKSAIAG 250 L G C S + Sbjct: 234 ALGGGCASPVGA 245 >gi|260579339|ref|ZP_05847221.1| porphobilinogen deaminase (hydroxymethylbilanesynthase) (Pre-uroporphyrinogen synthase) [Corynebacterium jeikeium ATCC 43734] gi|258602468|gb|EEW15763.1| porphobilinogen deaminase (hydroxymethylbilanesynthase) (Pre-uroporphyrinogen synthase) [Corynebacterium jeikeium ATCC 43734] Length = 359 Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 85/338 (25%), Positives = 142/338 (42%), Gaps = 43/338 (12%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITN--RTLTEIGG 60 + F IGTR S LA R + + + + T GD + +IG Sbjct: 24 DRTFLIGTRRSALATTQTSHVRDGMQSA----GYAAELHLVHTPGDASQAAQIPVAQIG- 78 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FTE + K L +GE D AVHS KD+PT + R D R+V +S Q L + Sbjct: 79 VGVFTETLRKALEAGECDVAVHSFKDLPTAPDPRFRT-VVPRRVDPREVLVSRNNQPLLE 137 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTS+ RR + + R D+ ++ RG I+TR+ + + A++LA AG++R+ Sbjct: 138 LPQGAKVGTSAPRRVSQIRAVRPDLELMPLRGNIDTRMGRTEKDL-DAVVLARAGLERVG 196 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + E ++ P+P QGA+ +E ++ A + V+ ++H + + ERA L+ L Sbjct: 197 QLERAAESIDPSTIMPAPAQGALSVEVRADDEAAWQAVRHLDHLPSHMAAVAERAVLSTL 256 Query: 241 DGSCKSAIAGFAYCKGST-----------LYFYGIVLASDGKIFHEVSRNGN-------- 281 + C + +A ++ L +G V A DG S Sbjct: 257 EAGCTAPVAAYSEWVQQEGTAEGADKRYVLRVFGGVFAMDGSRKLVRSGEAGFDIPEPTA 316 Query: 282 ---------------RCDAINIGRDAAQYIRFISNKNV 304 A IG D + + + Sbjct: 317 DEGFPAAEEPRWRECIAAARAIGIDIGRALLEDGAAEL 354 >gi|227828214|ref|YP_002829994.1| porphobilinogen deaminase [Sulfolobus islandicus M.14.25] gi|229585443|ref|YP_002843945.1| porphobilinogen deaminase [Sulfolobus islandicus M.16.27] gi|259646265|sp|C3MZR8|HEM3_SULIA RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|259709751|sp|C3MYD9|HEM3_SULIM RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|227460010|gb|ACP38696.1| porphobilinogen deaminase [Sulfolobus islandicus M.14.25] gi|228020493|gb|ACP55900.1| porphobilinogen deaminase [Sulfolobus islandicus M.16.27] Length = 293 Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 93/295 (31%), Positives = 141/295 (47%), Gaps = 11/295 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI R S L+ L + II + TK D + L+++G KG+F Sbjct: 2 KIRIAARGSKLSRIQVDMLGEKLKKI----GIEYEIIDIKTKADLFSTEPLSKLG-KGVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ + ++ G+ D AVHS KD+ +++ L+I A L R+ D+ I+ D + Sbjct: 57 EKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFAVLERDPPYDILIAEKNLDKLDS--N 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IGTSS+RRK L + +I+ D RG ++TR+ K + + ++LA A +KRL Sbjct: 115 ITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIRKYLSKEYQGLILAEASLKRLNMTM- 173 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 LN+ DF P QG I + K +E+ K INH+DT D ERA ++ + G C Sbjct: 174 NYHRLNVYDFTPEANQGIIVALGRKKDEKIKEIFKEINHKDTLDEALAERAVISLVGGGC 233 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S I +G FYGI SDGK VS + D IG + ++ Sbjct: 234 HSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS-KPGDPYTIGSELGLLLKKE 285 >gi|196232296|ref|ZP_03131150.1| porphobilinogen deaminase [Chthoniobacter flavus Ellin428] gi|196223664|gb|EDY18180.1| porphobilinogen deaminase [Chthoniobacter flavus Ellin428] Length = 307 Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 91/280 (32%), Positives = 135/280 (48%), Gaps = 16/280 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL---TEIG 59 K +GTR S LA+A T +L P I T+GD+ + +L E G Sbjct: 1 MKSIILGTRASALAVAQVELTTKALAAA--FPAMQIERREFVTRGDKKLDLSLLRANEAG 58 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKGLFT+E+E L++G ID AVHS KD+P GL I+A L R DV I+ Q+L Sbjct: 59 GKGLFTKELEDALLNGSIDVAVHSLKDLPGHNPPGLDITAVLERAPTADVLITKQPQTLL 118 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNKAHAILLAYAGIKR 178 DL ++GTSS+RR L R D+ V ++RG ++TRL KL + I+LA AG++R Sbjct: 119 DLPQGVLLGTSSVRRARQLQWRRPDVRVEEWRGNVQTRLRKLAERDDVTGIILAQAGLER 178 Query: 179 LKKE----------KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD 228 L + ED P+ GQGAI +++ + + +++ I+H +T Sbjct: 179 LGHDLSAGRLETEHGKFYVTSLAEDLLPAIGQGAIALQSRADRAEVAAVLQKIDHRETHL 238 Query: 229 SVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS 268 ++ ER L G C + + I+ Sbjct: 239 AIRAERELQRLLAGDCALPVGVRTKLLPGGIAMRAILFGP 278 >gi|16611929|gb|AAL27412.1|AF429957_3 porphobilinogen deaminase [uncultured bacterium] Length = 299 Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 79/298 (26%), Positives = 138/298 (46%), Gaps = 21/298 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 R+ TR S LAL A L+ + ++ + T+GDR R ++ G+G FT Sbjct: 4 VRLATRGSRLALWQAEWVAKQLVQQ----GAEVELVVVETQGDREK-RPFAQMQGQGFFT 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-----D 120 + +++ ++ G D AVHS KD+P+ GL+I+A PRED R++ + + Sbjct: 59 KAVQEAVLEGRADFAVHSYKDLPSARPAGLEIAAVPPREDPRELLLVRLQAVDQVAPGLP 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +G+S+ RR+A L R D+S+++ RG + TR+ KL + A+LLAYAG++RL Sbjct: 119 LRAGARVGSSAARRQAQLAHLRPDLSLLELRGNVLTRVEKLRQGEYDAVLLAYAGVRRLG 178 Query: 181 KE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + ++L P+P QGA+ +E ++ + + L++ ++ +A Sbjct: 179 LDLSPFHWQVLPPTLLVPAPAQGALALECRQDDKRLRPLLEPLDDPSAGVRC-GGAGLMA 237 Query: 239 ELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 L G C+ A+ A L G+ D + + I Sbjct: 238 RLAGGCQLALGALAQETPEGLQLLAWY------RGRSYQARGS--DPEAVAEAVFKEI 287 >gi|227830973|ref|YP_002832753.1| porphobilinogen deaminase [Sulfolobus islandicus L.S.2.15] gi|238620405|ref|YP_002915231.1| porphobilinogen deaminase [Sulfolobus islandicus M.16.4] gi|284998461|ref|YP_003420229.1| porphobilinogen deaminase [Sulfolobus islandicus L.D.8.5] gi|259709727|sp|C4KIZ9|HEM3_SULIK RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|259709750|sp|C3MJ21|HEM3_SULIL RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|227457421|gb|ACP36108.1| porphobilinogen deaminase [Sulfolobus islandicus L.S.2.15] gi|238381475|gb|ACR42563.1| porphobilinogen deaminase [Sulfolobus islandicus M.16.4] gi|284446357|gb|ADB87859.1| porphobilinogen deaminase [Sulfolobus islandicus L.D.8.5] Length = 293 Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 93/295 (31%), Positives = 141/295 (47%), Gaps = 11/295 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI R S L+ L + II + TK D + L+++G KG+F Sbjct: 2 KIRIAARGSKLSRIQVDMLGEKLKKI----GIEYEIIDIKTKADLFSTEPLSKLG-KGVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ + ++ G+ D AVHS KD+ +++ L+I A L R+ D+ I+ D + Sbjct: 57 EKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFAVLERDPPYDILIAEKNLDKLDS--N 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IGTSS+RRK L + +I+ D RG ++TR+ K + + ++LA A +KRL Sbjct: 115 ITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIRKYLSKEYQGLILAEASLKRLNMTM- 173 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 LN+ DF P QG I + K +E+ K INH+DT D ERA ++ + G C Sbjct: 174 NYHRLNVYDFTPEANQGIIVALGRKKDEKIKEIFKEINHKDTLDEALAERAVISLVGGGC 233 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S I +G FYGI SDGK VS + D IG + ++ Sbjct: 234 HSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS-KPGDPYTIGSELGLLLKKE 285 >gi|258567590|ref|XP_002584539.1| porphobilinogen deaminase [Uncinocarpus reesii 1704] gi|237905985|gb|EEP80386.1| porphobilinogen deaminase [Uncinocarpus reesii 1704] Length = 287 Score = 163 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 75/320 (23%), Positives = 127/320 (39%), Gaps = 60/320 (18%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 E+K + IGTR SPLAL R +L + + Sbjct: 5 ERKTYTIGTRKSPLALVQTDLVRRALQTAYPNCDLKV----------------------- 41 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119 +PT++ + A +PRE+ RDV + Sbjct: 42 ----------------------HGHVPTQIPDACVLGAMMPRENPRDVLVIKKGLPWMTL 79 Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGI 176 +L SV+GTSS+RR A L R + V D RG I+TRL KL+ + +++A AG+ Sbjct: 80 AELPAGSVVGTSSVRRTAQLARHYPHLVVQDIRGNIDTRLAKLDAEDGPFTCLIMAAAGL 139 Query: 177 KRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 R E + + L+ ++ + GQGA+ IE ++ +++V I T + ER Sbjct: 140 LRTGHENRVTQYLDSKNGKMLHAVGQGALGIEVRTDDEVMKDMVNKIGDMPTTYACMAER 199 Query: 235 AFLAELDGSCKSAIAGFA-YCKGST----LYFYGIVLASDGKIFHEVSRNGN---RCDAI 286 L ++G C + + + + L IV++ DGK E+ ++G+ +A Sbjct: 200 NLLRTVEGGCSAPLGVETEWIQDDNGKSLLRLRAIVVSVDGKEAVELEKDGDVESIEEAE 259 Query: 287 NIGRDAAQYIRFISNKNVFN 306 G+ A + + Sbjct: 260 AFGKQVALELIDKGAGKILE 279 >gi|323475281|gb|ADX85887.1| porphobilinogen deaminase [Sulfolobus islandicus REY15A] gi|323478006|gb|ADX83244.1| porphobilinogen deaminase [Sulfolobus islandicus HVE10/4] Length = 293 Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats. Identities = 93/295 (31%), Positives = 141/295 (47%), Gaps = 11/295 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI R S L+ L + II + TK D + L+++G KG+F Sbjct: 2 KIRIAARGSKLSRIQVDMLGEKLKKI----GIEYEIINIKTKADLFSTEPLSKLG-KGVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ + ++ G+ D AVHS KD+ +++ L+I A L R+ D+ I+ D + Sbjct: 57 EKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFAVLERDPPYDILIAEKNLDKLDS--N 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IGTSS+RRK L + +I+ D RG ++TR+ K + + ++LA A +KRL Sbjct: 115 ITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIRKYLSKEYQGLILAEASLKRLNMTM- 173 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 LN+ DF P QG I + K +E+ K INH+DT D ERA ++ + G C Sbjct: 174 NYHRLNVYDFTPEANQGIIVALGRKKDEKIKEIFKEINHKDTLDEALAERAVISLVGGGC 233 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S I +G FYGI SDGK VS + D IG + ++ Sbjct: 234 HSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS-KPGDPYTIGSELGLLLKKE 285 >gi|229581489|ref|YP_002839888.1| porphobilinogen deaminase [Sulfolobus islandicus Y.N.15.51] gi|259709752|sp|C3NF70|HEM3_SULIN RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|228012205|gb|ACP47966.1| porphobilinogen deaminase [Sulfolobus islandicus Y.N.15.51] Length = 293 Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats. Identities = 93/295 (31%), Positives = 141/295 (47%), Gaps = 11/295 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI R S L+ L + II + TK D + L+++G KG+F Sbjct: 2 KIRIAARGSKLSRIQVDMLGEKLKKI----GIEYEIIDIKTKADLFSTEPLSKLG-KGVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ + ++ G+ D AVHS KD+ +++ L+I A L R+ D+ I+ D + Sbjct: 57 EKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFAVLKRDPPYDILIAEKNLDKLDS--N 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IGTSS+RRK L + +I+ D RG ++TR+ K + + ++LA A +KRL Sbjct: 115 ITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIRKYLSKEYQGLILAEASLKRLNMTM- 173 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 LN+ DF P QG I + K +E+ K INH+DT D ERA ++ + G C Sbjct: 174 NYHRLNVYDFTPEANQGIIVALGRKKDEKIKEIFKEINHKDTLDEALAERAVISLVGGGC 233 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S I +G FYGI SDGK VS + D IG + ++ Sbjct: 234 HSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS-KPGDPYTIGSELGLLLKKE 285 >gi|146303002|ref|YP_001190318.1| porphobilinogen deaminase [Metallosphaera sedula DSM 5348] gi|189028093|sp|A4YD92|HEM3_METS5 RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|145701252|gb|ABP94394.1| hydroxymethylbilane synthase [Metallosphaera sedula DSM 5348] Length = 290 Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats. Identities = 91/299 (30%), Positives = 140/299 (46%), Gaps = 16/299 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI R S L+L + L + I + TK D N+ L EIG KG+F Sbjct: 2 KIRIAARGSKLSLKQVEIVTTYLQAK----GYETEFIEIKTKADLFGNKPLHEIG-KGVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ + ++ G D AVHS KDM ++L GL++ A RE+ DV +S L++L Sbjct: 57 EKEVNEAVLQGRADIAVHSMKDMSSELPPGLELLATPKRENPVDVLVSELN--LEELPEK 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S IGT SLRR L R D+ V + RG ++TRL K +++ I+LA AG++RL E Sbjct: 115 SRIGTGSLRRANFLKVVRPDLVVENIRGNVDTRLRKYRDHEYDGIILAEAGLRRLGVEVK 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 L++E F P P QG I + +PK L + +N T E+ + + G C Sbjct: 175 RF-PLDVESFTPEPNQGIIAVV---GSPKFLGLFQELNDTGTMKEALAEKETVKVVGGGC 230 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV---SRNGNRCDAINIGRDAAQYIRFIS 300 S + + L+ GI S+G V +R + +G+ + ++ Sbjct: 231 HSPLGVLFRLEDDVLH--GIASYSNGVKRVTVKLSTRESPQIAGNQLGKALVKAMKDEG 287 >gi|331003909|ref|ZP_08327398.1| porphobilinogen deaminase [Lachnospiraceae oral taxon 107 str. F0167] gi|330411929|gb|EGG91329.1| porphobilinogen deaminase [Lachnospiraceae oral taxon 107 str. F0167] Length = 311 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 96/314 (30%), Positives = 149/314 (47%), Gaps = 23/314 (7%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K RIGTR S LALA + ++ ++ P I IP+ST GD+ + +L EIGGK Sbjct: 3 NKNIIRIGTRKSALALAQSKLVGDAI--LNSFPHIKIEYIPMSTAGDKRLDISLQEIGGK 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA----QS 117 GLFT+E+E+ LI+G ID AVHSAKD+P + L++ L R + D+ Sbjct: 61 GLFTKELEEALINGNIDLAVHSAKDLPLEFDHRLKLMPVLKRAPVNDILAVKKDFLKETD 120 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 +K L IGTSS RR+ LL DI +I RG + TR+ K+ +N ++LA AGI+ Sbjct: 121 IKTLPEGFRIGTSSKRREKQLLFLNKDIKIIPVRGNVITRIEKIFSNDVDGVILAAAGIE 180 Query: 178 RLKK------------EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED 225 RLK +K+ + +D P+P QG +C E N + + +++ I + Sbjct: 181 RLKANDKYAAEFKDILDKISIINIREKDILPAPAQGILCAE--YANDEMETILEKIQDGE 238 Query: 226 TWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDA 285 ER +LA L C ++ + Y +GK + + + Sbjct: 239 CNTLFFAERKYLAVLQADCHTSAGIYIYKALDKYSIKAYF---EGKYLEKNMIDSSEKAL 295 Query: 286 INIGRDAAQYIRFI 299 + + A ++ Sbjct: 296 LEAVEELAGRLKRK 309 >gi|48477321|ref|YP_023027.1| porphobilinogen deaminase [Picrophilus torridus DSM 9790] gi|55976421|sp|Q6L2G8|HEM3_PICTO RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|48429969|gb|AAT42834.1| porphobilinogen deaminase [Picrophilus torridus DSM 9790] Length = 282 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 94/257 (36%), Positives = 142/257 (55%), Gaps = 10/257 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+ A + L + + ++KGD + L IGG G+F Sbjct: 3 IRIGTRSSKLAMIQAMMVKDRLDSL----GIETEVKGFTSKGDINLDSPLYSIGGTGVFV 58 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +++ + ++ EID AVHSAKD+P+ + L+ISA L R+D RDV I + SL DL S Sbjct: 59 DDLNRMILKNEIDIAVHSAKDIPSFIDDSLEISAVLKRDDPRDVLI--SQHSLNDLEASS 116 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSSLRR L R+DI + D RG I+TRL KL+N I++A A R++ Sbjct: 117 VIGTSSLRRIKELKTLRNDILIKDLRGNIDTRLKKLDNGDYDGIIMAKAAYDRMRI-NRR 175 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ILN +DF P+P QG I I + + +++K IN ++T++ + ER L+ L+ C Sbjct: 176 HFILNYDDFVPAPNQGIIAI-ISKKDSEINDVLKKINDDETYNDMKAERLILSGLNLGCS 234 Query: 246 SAIAGFAYCKGSTLYFY 262 + +A+ + ++ Sbjct: 235 KPVGIYAH--KNRIFMR 249 >gi|229579851|ref|YP_002838250.1| porphobilinogen deaminase [Sulfolobus islandicus Y.G.57.14] gi|259709753|sp|C3N841|HEM3_SULIY RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|228010566|gb|ACP46328.1| porphobilinogen deaminase [Sulfolobus islandicus Y.G.57.14] Length = 293 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 93/295 (31%), Positives = 141/295 (47%), Gaps = 11/295 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI R S L+ L + II + TK D + L+++G KG+F Sbjct: 2 KIRIAARGSKLSRIQVDMLGEKLKKI----GIEYEIIDIKTKADLFSTDPLSKLG-KGVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ + ++ G+ D AVHS KD+ +++ L+I A L R+ D+ I+ D + Sbjct: 57 EKEVNEAVLEGKADIAVHSMKDILSEINPSLEIFAVLERDPPYDILIAEKNLDKLDS--N 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IGTSS+RRK L + +I+ D RG ++TR+ K + + ++LA A +KRL Sbjct: 115 ITIGTSSIRRKNFLKYIKPEINTKDIRGNVDTRIRKYLSKEYQGLILAEASLKRLNMTM- 173 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 LN+ DF P QG I + K +E+ K INH+DT D ERA ++ + G C Sbjct: 174 NYHRLNVYDFTPEANQGIIVALGRKKDEKIKEIFKEINHKDTLDEALAERAVISLVGGGC 233 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S I +G FYGI SDGK VS + D IG + ++ Sbjct: 234 HSPIGVLFKKEGKE--FYGIASYSDGKKKITVSIS-KPGDPYTIGSELGLLLKKE 285 >gi|58264690|ref|XP_569501.1| hydroxymethylbilane synthase [Cryptococcus neoformans var. neoformans JEC21] gi|57225733|gb|AAW42194.1| hydroxymethylbilane synthase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 481 Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats. Identities = 82/288 (28%), Positives = 124/288 (43%), Gaps = 35/288 (12%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPP-----------------------HNI 38 + F +GTR S LAL L +H + Sbjct: 29 QTNTFILGTRKSNLALVQTGHVADDLRRLHSGAGSKFGETREEGDDAEQGDVPFVHPYTF 88 Query: 39 VIIPLSTKGDRITNRTLTEI-------GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91 I ++T GDR L + K L+T+E+E +LI+G D VHS KD+PT L Sbjct: 89 SIESMTTVGDRNQTTPLHLLSPYSSTQPAKSLWTDELEARLINGHFDMLVHSLKDVPTVL 148 Query: 92 LKGLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVI 148 G +I R D RD + + L+DL +V+GT S+RR A L R ++ Sbjct: 149 KDGCEIGCMAKRHDPRDALVVKQGLPYKRLEDLPDGAVVGTGSVRRVAQLKRAFPNLVFE 208 Query: 149 DFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206 D RG + TR NKL+ + A++LA +G++RL L+ + GQGA+ IE Sbjct: 209 DMRGNLNTRFNKLDNPQSPFSALILAMSGLERLGMAHRATSPLSSPTLMHAVGQGALAIE 268 Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254 +P+ + ++ + H T S ER L L+G C + + Sbjct: 269 IRSTDPRVRNCLRGLGHWQTEWSCGAERGCLRVLEGGCSVPVGVESEL 316 Score = 42.1 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 8/53 (15%), Positives = 19/53 (35%), Gaps = 4/53 (7%) Query: 258 TLYFYGIVLASDGKIFHEVS----RNGNRCDAINIGRDAAQYIRFISNKNVFN 306 L + V ++DG + + A G + A+ +R + + + Sbjct: 386 KLTLHSCVTSTDGSKHVLFTPPPVLVRSYRQAEQFGEECARRLRGMGAGEILD 438 >gi|134109785|ref|XP_776442.1| hypothetical protein CNBC4970 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259118|gb|EAL21795.1| hypothetical protein CNBC4970 [Cryptococcus neoformans var. neoformans B-3501A] Length = 481 Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats. Identities = 82/288 (28%), Positives = 124/288 (43%), Gaps = 35/288 (12%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPP-----------------------HNI 38 + F +GTR S LAL L +H + Sbjct: 29 QTNTFILGTRKSNLALVQTGHVADDLRRLHSGAGSKFGETREEGDDAEQGDVPFVHPYTF 88 Query: 39 VIIPLSTKGDRITNRTLTEI-------GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91 I ++T GDR L + K L+T+E+E +LI+G D VHS KD+PT L Sbjct: 89 SIESMTTVGDRNQTTPLHLLSPYSSTQPAKSLWTDELEARLINGHFDMLVHSLKDVPTVL 148 Query: 92 LKGLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVI 148 G +I R D RD + + L+DL +V+GT S+RR A L R ++ Sbjct: 149 KDGCEIGCMAKRHDPRDALVVKQGLPYKRLEDLPDGAVVGTGSVRRVAQLKRAFPNLVFE 208 Query: 149 DFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE 206 D RG + TR NKL+ + A++LA +G++RL L+ + GQGA+ IE Sbjct: 209 DMRGNLNTRFNKLDNPQSPFSALILAMSGLERLGMAHRATSPLSSPTLMHAVGQGALAIE 268 Query: 207 THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254 +P+ + ++ + H T S ER L L+G C + + Sbjct: 269 IRSTDPRVRNCLRGLGHWQTEWSCGAERGCLRVLEGGCSVPVGVESEL 316 Score = 42.1 bits (97), Expect = 0.11, Method: Composition-based stats. Identities = 8/53 (15%), Positives = 19/53 (35%), Gaps = 4/53 (7%) Query: 258 TLYFYGIVLASDGKIFHEVS----RNGNRCDAINIGRDAAQYIRFISNKNVFN 306 L + V ++DG + + A G + A+ +R + + + Sbjct: 386 KLTLHSCVTSTDGSKHVLFTPPPVLVRSYRQAEQFGEECARRLRGMGAGEILD 438 >gi|207109051|ref|ZP_03243213.1| porphobilinogen deaminase [Helicobacter pylori HPKX_438_CA4C1] Length = 242 Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats. Identities = 91/246 (36%), Positives = 131/246 (53%), Gaps = 5/246 (2%) Query: 10 TRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIE 69 +R S LAL A + L I + TKGD+I + L +IGGKGLFT+E+E Sbjct: 1 SRGSELALWQANHIKERLKKECF---IESEIQIVKTKGDKILDTPLNKIGGKGLFTKELE 57 Query: 70 KKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGT 129 + L+ GEID AVHS KD+P KGL ++ R D+RD F+S L L + +GT Sbjct: 58 ELLLKGEIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKVGT 117 Query: 130 SSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK-VIKEI 188 +SLRR L R D+ RG ++TRL KL + AI+LA AG+ RL+ + ++ Sbjct: 118 TSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGEFDAIILAEAGLCRLEIQGAKYRKA 177 Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAI 248 ++E+ PS GQGA+ +E N+ L + +N E + ER F+ L+G C+ I Sbjct: 178 FSVEEMIPSMGQGALGVEMLKNHKHFITL-QKLNDEKSAFCCRLEREFIKGLNGGCQIPI 236 Query: 249 AGFAYC 254 A Sbjct: 237 GVHASL 242 >gi|68536995|ref|YP_251700.1| hypothetical protein jk1901 [Corynebacterium jeikeium K411] gi|68264594|emb|CAI38082.1| hemC [Corynebacterium jeikeium K411] Length = 367 Score = 161 bits (408), Expect = 9e-38, Method: Composition-based stats. Identities = 86/346 (24%), Positives = 145/346 (41%), Gaps = 51/346 (14%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITN--RTLTEIGG 60 + F IGTR S LA R + + + + T GD + +IG Sbjct: 24 DRTFLIGTRRSALATTQTSHVRDGMQSA----GYAAELHLVHTPGDASQAAQIPVAQIG- 78 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+FTE + K L +GE D AVHS KD+PT + R D R+V +S Q L + Sbjct: 79 VGVFTETLRKALEAGECDVAVHSFKDLPTAPDPRFRT-VVPRRVDPREVLVSRNNQPLLE 137 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GTS+ RR + + R D+ ++ RG I+TR+ + + A++LA AG++R+ Sbjct: 138 LPQGAKVGTSAPRRVSQIRAVRPDLELMPLRGNIDTRMGRTEKDL-DAVVLARAGLERVG 196 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + + E ++ P+P QGA+ +E ++ A + V+ ++H + + ERA L+ L Sbjct: 197 QLERAAESIDPSTIMPAPAQGALSVEVRADDEAAWQAVRHLDHLPSHMAAVAERAVLSTL 256 Query: 241 DGSCKSAIAGFAYCKGST-------------------LYFYGIVLASDGK-IFHEVSRNG 280 + C + +A ++ L +G V A DG S G Sbjct: 257 EAGCTAPVAAYSEWVQQEGTADGAVDGTVDGTEKHYVLRVFGGVFAMDGSRKLVRSSEAG 316 Query: 281 -NRCD---------------------AINIGRDAAQYIRFISNKNV 304 + + A IG D + + + Sbjct: 317 FDISEPTADEGFPAAEEPRWREYIDAARAIGIDIGRALLEDGAAEL 362 >gi|121591883|ref|ZP_01679047.1| porphobilinogen deaminase [Vibrio cholerae 2740-80] gi|121546249|gb|EAX56552.1| porphobilinogen deaminase [Vibrio cholerae 2740-80] Length = 195 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 64/183 (34%), Positives = 97/183 (53%) Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 +++GT SLRR+ L R D+ + + RG + TRL+KL+ + AI+LA AG+KRL+ E Sbjct: 6 GAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELES 65 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 I+ + E P+ GQGA+ IE VN+ + + L+ +NH DT D V CERA L G Sbjct: 66 RIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTLQGG 125 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C+ I +A +G T++ +V DG G R A +G A+ + K Sbjct: 126 CQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQGAKE 185 Query: 304 VFN 306 + Sbjct: 186 ILE 188 >gi|307195489|gb|EFN77375.1| Porphobilinogen deaminase [Harpegnathos saltator] Length = 313 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 97/296 (32%), Positives = 148/296 (50%), Gaps = 39/296 (13%) Query: 45 TKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPRE 104 TKGD+I +++L +IG K LFTEE+E+ L G +D VHS KD+PT L G+ + A L RE Sbjct: 3 TKGDKILDKSLPKIGEKSLFTEELEQALGEGSLDFVVHSLKDLPTILPAGMALGALLKRE 62 Query: 105 DIRDVFISHTA---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 D RD + ++L L SVIGTSSLRR A L R + V + RG + TRL KL Sbjct: 63 DPRDAVVMSKKFKEKTLSTLPKGSVIGTSSLRRTAQLARNLPHLKVENIRGNLNTRLKKL 122 Query: 162 NNNK--AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219 ++ K AI+LA AG+KR+ + I +I+ E+ + GQGA+ +E ++ + + L++ Sbjct: 123 DDEKSAYAAIVLAAAGLKRIGWKDRISQIMEPEEALYAVGQGALGVECRESDWETRSLLE 182 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 + +T CER+FL L G C + +A + +G L G V + DG+ + + Sbjct: 183 PLYDMETTLKCVCERSFLKTLGGGCSAPVAVASSLEGEELKITGAVWSLDGQTLIKDTCK 242 Query: 280 G----NRCD------------------------------AINIGRDAAQYIRFISN 301 G + D A +G+D A + + Sbjct: 243 GKLFIPKDDGEPPRKCPYQEPRLYCGVVPGRMNALSLHGAEQLGKDLANNLIEKNA 298 >gi|313896614|ref|ZP_07830163.1| hydroxymethylbilane synthase [Selenomonas sp. oral taxon 137 str. F0430] gi|312974799|gb|EFR40265.1| hydroxymethylbilane synthase [Selenomonas sp. oral taxon 137 str. F0430] Length = 190 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 72/176 (40%), Positives = 103/176 (58%), Gaps = 2/176 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M IGTR S LAL A L H P +V+ ++TKGD+I + L +IGG Sbjct: 1 MNSGTITIGTRASKLALWQAKFVAGELQKRH--PSVTVVLKKMTTKGDKILDAPLAKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFT+E+E+ +++G+ID AVHS KDMP ++ GL I A R D D F+S+ ++++ Sbjct: 59 KGLFTKELEQAMLAGDIDIAVHSLKDMPIEIPAGLIIGAITARLDPGDAFVSNQYAAIEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGI 176 L + +GTSSLRR+A LL R D+ ++D RG + TRL KL+ + G Sbjct: 119 LPAGARVGTSSLRRRAQLLAVRPDLVLLDLRGNVNTRLEKLDAGSLTPLYSPRRGC 174 >gi|15897134|ref|NP_341739.1| porphobilinogen deaminase [Sulfolobus solfataricus P2] gi|284174377|ref|ZP_06388346.1| porphobilinogen deaminase [Sulfolobus solfataricus 98/2] gi|25453029|sp|Q980U4|HEM3_SULSO RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|13813317|gb|AAK40529.1| Porphobilinogen deaminase [Sulfolobus solfataricus P2] gi|261601798|gb|ACX91401.1| porphobilinogen deaminase [Sulfolobus solfataricus 98/2] Length = 293 Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 90/295 (30%), Positives = 142/295 (48%), Gaps = 11/295 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I R S L+ L + +I + TK D + L+++G KG+F Sbjct: 2 KILIAARGSKLSRVQVDMVGEKLRKI----GIEYDVIDIKTKADLFSTEPLSKLG-KGVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ + ++ G+ D AVHS KD+ +++ L+I A + R+ D+ I+ D + Sbjct: 57 EKEVNEAVLEGKADVAVHSMKDILSEINPELEIFAVIERDPPYDILIAEKNLHKLDP--N 114 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + IGTSS+RRK + R +I+ D RG ++TR+ K + + ++LA A IKRL + Sbjct: 115 TTIGTSSIRRKNFIKYIRPEINTKDIRGNVDTRIRKYLSKEYDGLILAEASIKRLNIS-I 173 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 LN+ DF P QG I + + K +E+ K I H+DT D ERA ++ + G C Sbjct: 174 SYHRLNVYDFTPEANQGIIVVLGRKKDEKVKEVFKEITHKDTLDEALAERATISVVGGGC 233 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S I +G FYGI SDGK VS + D IG + ++ Sbjct: 234 HSPIGVLFRKEGKE--FYGIASYSDGKKKITVSIS-KAGDPYTIGSELGLLLKKE 285 >gi|167844775|ref|ZP_02470283.1| porphobilinogen deaminase [Burkholderia pseudomallei B7210] Length = 222 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 85/203 (41%), Positives = 127/203 (62%), Gaps = 2/203 (0%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +V+GTSSLRR+A+L + V RG ++TRL KL+ AI+LA AG+KRL Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAAR 190 Query: 185 IKEILNIEDFPPSPGQGAICIET 207 I+ +L+++D P+ GQGA+ IE Sbjct: 191 IRALLDVDDSLPAAGQGALGIEI 213 >gi|16081675|ref|NP_394046.1| porphobilinogen deaminase [Thermoplasma acidophilum DSM 1728] gi|13627133|sp|Q9HKM5|HEM3_THEAC RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|10639740|emb|CAC11712.1| porphobilinogen deaminase related protein [Thermoplasma acidophilum] Length = 295 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 88/269 (32%), Positives = 134/269 (49%), Gaps = 8/269 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RIGTR S LA+ A S++ + + I+ ++GD L IG G+F Sbjct: 3 TIRIGTRPSRLAVRQAEIVASAIRHA----GYEVEIVKYRSEGDSDLKSPLYSIGKTGVF 58 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 E + ++SG+ID AVHSAKD+P ++ + L+ISA +PR D + + L L Sbjct: 59 VERLNSLILSGDIDAAVHSAKDIPYEIDRRLRISAVMPRGRFEDALV--SENPLSKLPPG 116 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SVIGTSSLRR+ +L R D+ V + RG ++TR+ K+ + I++A A I RL+ Sbjct: 117 SVIGTSSLRRRYQILYQRKDVKVSNIRGNVDTRIEKMRSEGMAGIVMALAAIDRLELNLR 176 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E F P+P QG I + + KA E++ IN DT+D + ER+ L C Sbjct: 177 YW-PFDPEKFVPAPNQGIIAV-VSEDGSKASEVLSSINDADTYDDMMAERSITQGLKLGC 234 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 + + + G + A DG Sbjct: 235 STPVGILSRHTGKGMRILAQFFAMDGSDM 263 >gi|124805668|ref|XP_001350505.1| porphobilinogen deaminase [Plasmodium falciparum 3D7] gi|23496628|gb|AAN36185.1| porphobilinogen deaminase [Plasmodium falciparum 3D7] gi|70780284|gb|AAZ08393.1| porphobilinogen deaminase [Plasmodium falciparum] Length = 435 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 102/363 (28%), Positives = 164/363 (45%), Gaps = 59/363 (16%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITN-RTLTEIG 59 K IGTR SPLAL + + R +M K N+ + T GD I + +++ G Sbjct: 59 KDEIIIGTRDSPLALKQSEKVRKKIMSYFKKMNKNINVTFKYIKTTGDNILDSKSVGLYG 118 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 GKG+FT+E++++LI+G +D VHS KD+P L +++S +L R+ I D F+S +S+ Sbjct: 119 GKGIFTKELDEQLINGNVDLCVHSLKDVPILLPNNIELSCFLKRDTINDAFLSIKYKSIN 178 Query: 120 DLALH------------------------SVIGTSSLRRKALLLRWRSDISVIDFRGKIE 155 D+ IGTSSLRR++ + +I V + RG I Sbjct: 179 DMNTVKSVSKTEDIHHINKKDSDHNNDTLCTIGTSSLRRRSQIKNRYKNIYVNNIRGNIN 238 Query: 156 TRLNKLNNNKAHAILLAYAGI--------------------------------KRLKKEK 183 TR+ KL N + A+++A GI K + Sbjct: 239 TRIEKLYNGEVDALIIAMCGIERLIKKANLKHLLKNKEQKNICQPFLLKCNNKKCIDLCH 298 Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 V + LN P+ GQG I + +H N L+K IN++ + ER+FL +DG+ Sbjct: 299 VNIQKLNKNLIYPALGQGIIAVTSHKKNYFISSLLKNINNKKSEMMAQIERSFLYHIDGN 358 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 C I G+ + +Y + I+ G ++V++ + IG +AA ++ I Sbjct: 359 CMMPIGGYTNMRNEDIYLHVIINDIHGYNKYQVTQKDTLYNYKEIGPNAAIKMKEIIGTE 418 Query: 304 VFN 306 FN Sbjct: 419 QFN 421 >gi|333024831|ref|ZP_08452895.1| putative porphobilinogen deaminase [Streptomyces sp. Tu6071] gi|332744683|gb|EGJ75124.1| putative porphobilinogen deaminase [Streptomyces sp. Tu6071] Length = 308 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 86/311 (27%), Positives = 131/311 (42%), Gaps = 14/311 (4%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT----LT 56 M + +G+R S LA A E ++P V ++ GD + +T Sbjct: 1 MVESVVTVGSRGSALARAQVREMVERWER--EVPGARFVRRVITEAGDADRSTPTVAGVT 58 Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQI-SAYLPREDIRDVFISHTA 115 G F+ E L+ GE+D VH KD+PT G + PRED+RD Sbjct: 59 RRAGASAFSSRQEAALVRGEVDVVVHCLKDLPTAPAPGTVLLRTPGPREDVRDAL---CG 115 Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 +L L + +GT S RR A +L R D+ V+ RG + RL + A++LA AG Sbjct: 116 ATLAGLPTGARVGTGSTRRVAQMLALRPDLEVVPVRGNVPARLAR--TRTLDAVVLAAAG 173 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + RL I E L+ E +PP+PGQGA+ I+ + +A L+ T V ER Sbjct: 174 LHRLGLADEITEYLDPEAYPPAPGQGALAIQVR-EDSEAARLLAASGDAATDAEVRAERV 232 Query: 236 FLAELDGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQ 294 LAEL G C + + + + L + V DG + G + + A+ Sbjct: 233 LLAELHGGCSVPLGTWTSRPSPTLLRLHAAVTTPDGTHQIAATAQGPAEEPEKLALTVAE 292 Query: 295 YIRFISNKNVF 305 + + Sbjct: 293 RLLAQGAARIL 303 >gi|297567358|ref|YP_003686330.1| porphobilinogen deaminase [Meiothermus silvanus DSM 9946] gi|296851807|gb|ADH64822.1| porphobilinogen deaminase [Meiothermus silvanus DSM 9946] Length = 304 Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats. Identities = 77/270 (28%), Positives = 133/270 (49%), Gaps = 14/270 (5%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LA A + L D ++ + T+GDR +++ G Sbjct: 1 MSR--VRIATRGSRLARWQAEWVAAQLQDQ----GIASTLVIVETQGDRER-VAFSQMQG 53 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 +G FT+ ++ + G D AVHS KD+P+ GL ++A RED R+ + + Sbjct: 54 QGFFTKAVQDAVREGRADLAVHSLKDLPSAPTPGLVLAAIPIREDPREALLVLPSAWDAQ 113 Query: 121 LA-----LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 + +G+S++RR+A L + R D+ +++ RG + TR+ KL + AILLA+AG Sbjct: 114 APALPLAPGARVGSSAVRRQAQLAQLRPDLKLLELRGNVPTRVEKLQSGGYEAILLAWAG 173 Query: 176 IKRLKKE--KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 +KRL + + +L +F P+PGQGA+ +E + + + +++ ++ +V E Sbjct: 174 LKRLGLDLGGLAVRLLEPREFVPAPGQGALALECREEDTQLRGVLQGLDDPTARLTVGIE 233 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYG 263 R +A L G C+ A+ A Sbjct: 234 RGLMARLQGGCQLALGASAQRVQGGWQLLA 263 >gi|300933794|ref|ZP_07149050.1| hypothetical protein CresD4_06949 [Corynebacterium resistens DSM 45100] Length = 355 Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats. Identities = 85/332 (25%), Positives = 141/332 (42%), Gaps = 36/332 (10%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR--TLTEIG 59 ++ IGTR S LA + ++ + + + + T GD + +IG Sbjct: 26 SQRTLLIGTRRSQLATTQSGHVQAGITEQGWAS----ELHIVQTPGDASQASQIPVAQIG 81 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 G+FTE + L + E D AVHS KD+PT K +I R D R+V +S + LK Sbjct: 82 -VGVFTETLRNALAAKECDVAVHSFKDLPTAPDKRFRII-VPERVDPREVLVSVDNRLLK 139 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 DL + +GTS+ RR + L R D+ ++ RG I++R+ ++ A++LA AG++R+ Sbjct: 140 DLPEGAKVGTSAPRRVSQLRAVRPDLEILPLRGNIDSRMGRV-GTDLDAVILARAGLERV 198 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + E L+ P+P QGA+ +E ++ +A + V + H + ERA LA Sbjct: 199 GQLDRAAESLDPHVIMPAPAQGALAVEVRADDDEAWQAVLPLEHLPSHLMAAAERAVLAT 258 Query: 240 LDGSCKSAIAGFAYCKGS---TLYFYGIVLASDGKIFH--EVSRNGNRC--DAI------ 286 L+ C + +A + GS L V DG V R +A Sbjct: 259 LEAGCSAPVAAHSEWTGSDHTELTISAGVFGMDGTKQLVDTVKVTFPREFVNAERPQETK 318 Query: 287 --------------NIGRDAAQYIRFISNKNV 304 + G + ++ Sbjct: 319 PDLDKREQLLARAFDAGSRLGTILLEAGASDL 350 >gi|281348599|gb|EFB24183.1| hypothetical protein PANDA_019874 [Ailuropoda melanoleuca] Length = 298 Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats. Identities = 90/289 (31%), Positives = 132/289 (45%), Gaps = 39/289 (13%) Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA- 115 +IG K LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H Sbjct: 1 QIGEKSLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKF 60 Query: 116 --QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLA 172 ++L+ L SV+GTSSLRR A L R + RG + TRL KL+ + AI+LA Sbjct: 61 VGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILA 120 Query: 173 YAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNC 232 AG++R+ + + +IL+ E+ + GQGA+ +E + +LV V++ +T Sbjct: 121 AAGLQRMGWQHRVGQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIA 180 Query: 233 ERAFLAELDGSCKSAIAGFAYCKGST------LYFYGIVLASDGKIFHEVSR-------- 278 ERAFL L+G C +A K LY G V + DG + + Sbjct: 181 ERAFLRHLEGGCSVPVAVHTAMKDGQASRGRWLYLTGGVWSLDGSDSMQETMQATIRVTA 240 Query: 279 ---NGNRCD------------------AINIGRDAAQYIRFISNKNVFN 306 +G D A N+G A + KN+ + Sbjct: 241 QLEDGPEDDPQLVGITARNIPREAQLAAENLGISLASLLLNKGAKNILD 289 >gi|301630715|ref|XP_002944462.1| PREDICTED: porphobilinogen deaminase-like, partial [Xenopus (Silurana) tropicalis] Length = 291 Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 87/281 (30%), Positives = 120/281 (42%), Gaps = 33/281 (11%) Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 IG K LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H + Sbjct: 1 IGEKSLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPYDAVVFHPKRY 60 Query: 118 LKDL---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAY 173 L SVIGTSSLRR A L + + D RG + TR+ KL+ AI+LA Sbjct: 61 GNTLSTLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRMKKLDEKEDFSAIILAA 120 Query: 174 AGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCE 233 AG++R+ E I +IL ++ + GQGA+ IE + +V + +T E Sbjct: 121 AGLRRMGWENRIGQILTSDECLYAVGQGALAIEVRAKDQDILSMVSALQDPETVLRCIAE 180 Query: 234 RAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV-----------SRNGNR 282 RAF+ L+G C +A K S LY G V + DG + G Sbjct: 181 RAFMKRLEGGCSVPVAVNTVVKDSQLYLTGAVYSLDGSDSLKETMQSCINFPQQEVEGPN 240 Query: 283 CD------------------AINIGRDAAQYIRFISNKNVF 305 D A +G A + K + Sbjct: 241 DDVQHVGITALGVSHQALESAECLGTGLADLLLSKGAKEIL 281 >gi|295836866|ref|ZP_06823799.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74] gi|197699525|gb|EDY46458.1| hydroxymethylbilane synthase [Streptomyces sp. SPB74] Length = 335 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 89/308 (28%), Positives = 129/308 (41%), Gaps = 14/308 (4%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT----LTEIG 59 + +G+R S LA A E ++P V ++ GD + +T Sbjct: 31 RTVTVGSRGSALARAQVREMVERWER--EVPGVRFVRRVITEAGDADRSTPTVAGVTRRA 88 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQI-SAYLPREDIRDVFISHTAQSL 118 G F+ E L+ E+D VH KD+PT G + PRED RD +L Sbjct: 89 GVSAFSSRQEAALVRREVDVVVHCLKDLPTTPAPGTALLRTPGPREDARDAL---CGATL 145 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L + +GT S RR A LL R D+ VI RG + RL +L A++LA AG+ R Sbjct: 146 AGLPRGARVGTGSTRRVAQLLALRPDLEVIPVRGNVPARLARLRT--LDAVVLAAAGLHR 203 Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 L + I E L+ E +PP+PGQGA+ I+ A L+ T V ER LA Sbjct: 204 LGLTEEITEYLDPEAYPPAPGQGALAIQVR-EGSGAARLLAASGDPATDTEVRAERVLLA 262 Query: 239 ELDGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 EL G C + + + TL + V A DG + G + + A+ + Sbjct: 263 ELHGGCSVPLGTWTSRPSPGTLRLHAAVTAPDGGRQITATAQGPASEPDKLALTVAERLL 322 Query: 298 FISNKNVF 305 + Sbjct: 323 AGGAARIL 330 >gi|116754430|ref|YP_843548.1| porphobilinogen deaminase [Methanosaeta thermophila PT] gi|116665881|gb|ABK14908.1| hydroxymethylbilane synthase [Methanosaeta thermophila PT] Length = 270 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 85/263 (32%), Positives = 139/263 (52%), Gaps = 3/263 (1%) Query: 42 PLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYL 101 + T GD +R L I G+GLF EI+++++SGEID AVHS KD+P+K + L+I+A + Sbjct: 2 TVRTSGDLFLDRPLHMISGQGLFVREIDERMLSGEIDLAVHSMKDLPSKRPERLRIAAIM 61 Query: 102 PREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 R+ D+ ++ L DL +VIGTSS+RR A L R R D+ V RG ++TRL KL Sbjct: 62 KRDSPCDILLTKDGSGLDDLKSGAVIGTSSMRRAAQLRRARPDLVVRSLRGNLQTRLRKL 121 Query: 162 NNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221 + + I++A AG++R+ + ++L+ F PSP QG I + V + L +I Sbjct: 122 HAGEYDGIVIAEAGVQRMGY-HLGYKVLDPGFFVPSPNQGTIAV-VSVAGTEGDALASLI 179 Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGN 281 +H + + ER + + G C +A FA G ++ +L+ DG+ F + Sbjct: 180 DHRPSREETMVERRIMEVVGGGCLVPMAVFARHLGDRIHVTAEILSKDGERFVRLEDTVP 239 Query: 282 RCDAINIGRDAAQYIRFISNKNV 304 R D + + + + + Sbjct: 240 R-DGLESAERIGRRLLEMGGDEL 261 >gi|297622476|ref|YP_003703910.1| porphobilinogen deaminase [Truepera radiovictrix DSM 17093] gi|297163656|gb|ADI13367.1| porphobilinogen deaminase [Truepera radiovictrix DSM 17093] Length = 320 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 79/267 (29%), Positives = 126/267 (47%), Gaps = 13/267 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT--NRTLTEIGGKGL 63 RI TR S LAL A R L + ++PL T+GDR + G+G Sbjct: 20 VRIATRKSALALWQATWVRERLAAL----GVATELVPLDTQGDRTQEAGTPFRLMPGQGF 75 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA- 122 FT+ ++ ++ G D AVHS KD+P+ L GL+++A RED RDV + + + A Sbjct: 76 FTKAVQDAVLEGRADVAVHSHKDLPSARLAGLELAAVTEREDPRDVLLVRPGAARPESAA 135 Query: 123 ----LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAH--AILLAYAGI 176 +V+GTS+ RR+A L R D+ V + RG + TR+ L + + A Sbjct: 136 LPLVEGAVVGTSAARRQAQLRHLRPDVRVAELRGNVPTRVRALREGRYDAVVLAAAGLAR 195 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 L + L+ + F P+P QGA+ +E + + L+ ++ D + +V ER Sbjct: 196 LALDLSDLTVYPLDPKRFVPAPAQGALALEIRRGDAELAALLTELHAPDAYQTVAAERGL 255 Query: 237 LAELDGSCKSAIAGFAYCKGSTLYFYG 263 + L G C+ A+ +A +G L Sbjct: 256 MGMLQGGCQLALGAYAALQGGELELTA 282 >gi|315654433|ref|ZP_07907341.1| hydroxymethylbilane synthase [Mobiluncus curtisii ATCC 51333] gi|315491468|gb|EFU81085.1| hydroxymethylbilane synthase [Mobiluncus curtisii ATCC 51333] Length = 373 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 91/347 (26%), Positives = 141/347 (40%), Gaps = 48/347 (13%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++P IGTR S LAL S L ++ + +T+GD +L +GG Sbjct: 7 TERPLVIGTRASALALTQTRAVASDLEQR----GLHVQVQTFTTEGDINR-ASLASLGGV 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F + L+ G D VHS KD+PT + GL ++A RED DV ++ + SL DL Sbjct: 62 GVFAAALRVALLEGHCDLVVHSLKDLPTVPVDGLVVAATPTREDPGDVLVARDSLSLADL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------------NNK 165 S +GT S RR + R DI ++D RG + TR+ ++ Sbjct: 122 PAGSRLGTGSPRRARQIAVARPDIELVDIRGNVPTRVGRVKGLAAVAEHAGLPSGKAAED 181 Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV------K 219 ++LA AG++RL + I + L P+ GQGA+ +ET + E K Sbjct: 182 LDGVVLARAGLRRLGMDDAITDSLE-GTVIPAGGQGALALETRSELLDSDEGRNFAQILK 240 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAG--------FAYCKGSTLYFY-------GI 264 ++ E T V+ ERA L L+ C + + L G Sbjct: 241 FVDDEPTRLEVSAERALLRYLEAGCAAPLGVRGIVTWDKHTEAPSGRLELTARVIGNQGE 300 Query: 265 VLASDGKIFH-----EVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 VL +G+ R+ A +G D A + + + Sbjct: 301 VLEVNGETTVLLGAEAAQRDFALAAAEQLGVDLAGELLEAGAATIAD 347 >gi|298345857|ref|YP_003718544.1| porphobilinogen deaminase [Mobiluncus curtisii ATCC 43063] gi|304390438|ref|ZP_07372391.1| hydroxymethylbilane synthase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315657641|ref|ZP_07910523.1| hydroxymethylbilane synthase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298235918|gb|ADI67050.1| porphobilinogen deaminase [Mobiluncus curtisii ATCC 43063] gi|304326194|gb|EFL93439.1| hydroxymethylbilane synthase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315492113|gb|EFU81722.1| hydroxymethylbilane synthase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 373 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 91/347 (26%), Positives = 141/347 (40%), Gaps = 48/347 (13%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++P IGTR S LAL S L ++ + +T+GD +L +GG Sbjct: 7 TERPLVIGTRASALALTQTRAVASDLEQR----GLHVQVQTFTTEGDINR-ASLASLGGV 61 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F + L+ G D VHS KD+PT + GL ++A RED DV ++ + SL DL Sbjct: 62 GVFAAALRVALLEGHCDLVVHSLKDLPTVPVDGLVVAATPTREDPGDVLVARDSLSLADL 121 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------------NNK 165 S +GT S RR + R DI ++D RG + TR+ ++ Sbjct: 122 PAGSRLGTGSPRRARQIAVARPDIELVDIRGNVPTRVGRVKGLAAVAEQAGLPSGKAAED 181 Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV------K 219 ++LA AG++RL + I + L P+ GQGA+ +ET + E K Sbjct: 182 LDGVVLARAGLRRLGMDDAITDSLE-GTVIPAGGQGALALETRSELLDSDEGRNFAQILK 240 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAG--------FAYCKGSTLYFY-------GI 264 ++ E T V+ ERA L L+ C + + L G Sbjct: 241 FVDDEPTRLEVSAERALLRYLEAGCAAPLGVRGVVTWDKHTEAPSGRLELTARVIGNQGE 300 Query: 265 VLASDGKIFH-----EVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 VL +G+ R+ A +G D A + + + Sbjct: 301 VLEVNGETTVLLGAEAAQRDFALAAAEQLGVDLAGELLEAGAATIAD 347 >gi|327329283|gb|EGE71043.1| hydroxymethylbilane synthase [Propionibacterium acnes HL103PA1] Length = 315 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 85/312 (27%), Positives = 133/312 (42%), Gaps = 32/312 (10%) Query: 22 ETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAV 81 L ++ + ++T GD I+ +L +GG G+F I L+ GE D AV Sbjct: 1 MVARLLRS----EGLDVDLTTITTHGD-ISTASLAAMGGIGVFASAIRATLLKGEADIAV 55 Query: 82 HSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRW 141 HS KD+PT GL I A R D RD ++ +L DL + +GT S RR A LL Sbjct: 56 HSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAV 115 Query: 142 RSDISVIDFRGKIETRLNKLN----------NNKAHAILLAYAGIKRLKKEKVIKEILNI 191 R D++++D RG ++TRL ++ A++LA +G+ RL + E L+ Sbjct: 116 RPDLTIVDIRGNVDTRLGRVKGLGHYAKGGGKEDLDAVVLAASGLARLGHSGTVTEFLDP 175 Query: 192 EDFPPSPGQGAICIETHVNNPKAQELV---KVINHEDTWDSVNCERAFLAELDGSCKSAI 248 P+P QGA+ +E + + +L I+ T + ERA L+ L+ C + I Sbjct: 176 SVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTRLAATAERAVLSHLEAGCAAPI 235 Query: 249 AGFAYCK------GSTLYFYGIVLASDGKIFHE--------VSRNGNRCDAINIGRDAAQ 294 A K L +V DG + A +G AA+ Sbjct: 236 GALAQLKPVSGSSPQVLTLDVVVATVDGSRIIREQVSVELPAEVDSALAAAHTLGVTAAE 295 Query: 295 YIRFISNKNVFN 306 + +V + Sbjct: 296 ELLDDGAADVAD 307 >gi|333025240|ref|ZP_08453304.1| putative porphobilinogen deaminase [Streptomyces sp. Tu6071] gi|332745092|gb|EGJ75533.1| putative porphobilinogen deaminase [Streptomyces sp. Tu6071] Length = 307 Score = 156 bits (393), Expect = 5e-36, Method: Composition-based stats. Identities = 79/281 (28%), Positives = 135/281 (48%), Gaps = 21/281 (7%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 +A + ++ + ++ ++ ++T GD L IGG G+F + L+ G+ Sbjct: 1 MAQSGLVADAVREAT---GRSVELVEITTYGDTSR-EHLARIGGTGVFVTALRDALLRGD 56 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKA 136 +D AVHS KD+PT +GL ++A RED RD I+ +L+ L + IGT S RR A Sbjct: 57 VDFAVHSLKDLPTAQPEGLALAAVPRREDPRDALIARDGLTLERLPRGARIGTGSPRRMA 116 Query: 137 LLLRWRS----DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192 L DI + RG ++TR+N + + + A++LA AG+ RL + + L + Sbjct: 117 QLNAHARAHGLDIETVPIRGNVDTRINFVRDGELDAVVLAAAGLNRLGRGGEVTAYLASD 176 Query: 193 DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252 P+PGQGA+ +E E + ++ T +V ERA LA L+ C + + A Sbjct: 177 TVLPAPGQGALAVECPPGP--LAEALARLDDPRTRAAVTAERALLAALEAGCSAPVGALA 234 Query: 253 YCKG-----------STLYFYGIVLASDGKIFHEVSRNGNR 282 G + + G+V ++DG +++ G+ Sbjct: 235 DFTGAPQDQAAQRQTTEMRLRGVVGSTDGSELVQLTTTGHV 275 >gi|318057211|ref|ZP_07975934.1| porphobilinogen deaminase [Streptomyces sp. SA3_actG] gi|318079308|ref|ZP_07986640.1| porphobilinogen deaminase [Streptomyces sp. SA3_actF] Length = 314 Score = 156 bits (393), Expect = 5e-36, Method: Composition-based stats. Identities = 85/306 (27%), Positives = 128/306 (41%), Gaps = 14/306 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT----LTEIGGK 61 +G+R S LA A E ++P V ++ GD + +T G Sbjct: 12 VTVGSRGSALARAQVREMVERWER--EVPGTRFVRRVITEAGDADRSTPTVAGVTRRAGA 69 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQI-SAYLPREDIRDVFISHTAQSLKD 120 F+ E L+ GE+D VH KD+P G + PRED+RD +L Sbjct: 70 SAFSSRQEAALVRGEVDVVVHCLKDLPNAPAPGTVLLRTPGPREDVRDAL---CGATLAG 126 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT S RR A LL R D+ V+ RG + RL + A++LA AG+ RL Sbjct: 127 LPTGARVGTGSTRRVAQLLALRPDLEVVPVRGNVPARLAR--TRTLDAVVLAAAGLHRLG 184 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E L+ E +PP+PGQGA+ I+ + +A L+ T V ER LAEL Sbjct: 185 LADEITEYLDPEVYPPAPGQGALAIQVR-EDSEAARLLAASGDAATDAEVRAERVLLAEL 243 Query: 241 DGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G C + + + + L + V DG + G + + A+ + Sbjct: 244 HGGCSVPLGTWTSRPSPTLLRLHAAVTTPDGTHQIAATAQGPTAEPEKLALTVAERLLAQ 303 Query: 300 SNKNVF 305 + Sbjct: 304 GAARIL 309 >gi|332796306|ref|YP_004457806.1| porphobilinogen deaminase [Acidianus hospitalis W1] gi|332694041|gb|AEE93508.1| porphobilinogen deaminase [Acidianus hospitalis W1] Length = 292 Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats. Identities = 86/292 (29%), Positives = 139/292 (47%), Gaps = 11/292 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI R S L+ L + + I + TK D N L ++G KG+F Sbjct: 2 IRIAARNSQLSQVQVKVVSDYLNKL----GYETEFIGVKTKADLFVNEPLYKLG-KGVFE 56 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+ + +I G D AVHS KD+ + L + L I A + R+ DV +S + + DL S Sbjct: 57 KEVNEYVIRGLADLAVHSMKDLTSNLSEELDILATVKRDSPYDVLVSK--KDVFDLDSGS 114 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS+RRK + R DI V D RG I+TR+ K + + I++A A I RL + Sbjct: 115 VIGTSSIRRKNFMTFLRPDILVKDLRGNIDTRIKKYTSGEYVGIIIAEASILRLN-LNIN 173 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 LN DF P QG I + N+ + ++L+ ++ ++T++ ER+ + + G C Sbjct: 174 YFKLNPIDFTPEANQGIIAVVGKKNDERTRKLLSELHDQETFNEAIAERSTMEIVGGGCH 233 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 S + GI S+GK V+ + + ++G + + + Sbjct: 234 SPFGVYFEQIDD--RLLGIASFSNGKKKITVTIE-RKGNPKDVGHELGKLLL 282 >gi|313814512|gb|EFS52226.1| porphobilinogen deaminase [Propionibacterium acnes HL025PA1] gi|314922347|gb|EFS86178.1| porphobilinogen deaminase [Propionibacterium acnes HL001PA1] gi|314965338|gb|EFT09437.1| porphobilinogen deaminase [Propionibacterium acnes HL082PA2] gi|314982570|gb|EFT26662.1| porphobilinogen deaminase [Propionibacterium acnes HL110PA3] gi|315091095|gb|EFT63071.1| porphobilinogen deaminase [Propionibacterium acnes HL110PA4] gi|315094182|gb|EFT66158.1| porphobilinogen deaminase [Propionibacterium acnes HL060PA1] gi|315104838|gb|EFT76814.1| porphobilinogen deaminase [Propionibacterium acnes HL050PA2] Length = 315 Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats. Identities = 84/312 (26%), Positives = 132/312 (42%), Gaps = 32/312 (10%) Query: 22 ETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAV 81 L ++ + ++T GD + +L +GG G+F I L+ GE D AV Sbjct: 1 MVARLLRS----EGLDVDLTTITTHGDT-STASLAAMGGIGVFASAIRATLLKGEADIAV 55 Query: 82 HSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRW 141 HS KD+PT GL I A R D RD ++ +L DL + +GT S RR A LL Sbjct: 56 HSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAV 115 Query: 142 RSDISVIDFRGKIETRLNKLN----------NNKAHAILLAYAGIKRLKKEKVIKEILNI 191 R D++++D RG ++TRL ++ A++LA +G+ RL + E L+ Sbjct: 116 RPDLTIVDIRGNVDTRLGRVKGLGHYAKGGGKEDLDAVVLAASGLARLGHSGTVTEFLDP 175 Query: 192 EDFPPSPGQGAICIETHVNNPKAQELV---KVINHEDTWDSVNCERAFLAELDGSCKSAI 248 P+P QGA+ +E + + +L I+ T + ERA L+ L+ C + I Sbjct: 176 SVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTRLAATAERAVLSHLEAGCAAPI 235 Query: 249 AGFAYCK------GSTLYFYGIVLASDGKIFHE--------VSRNGNRCDAINIGRDAAQ 294 A K L +V DG + A +G AA+ Sbjct: 236 GALAQLKPVSGSSPQVLTLDVVVATVDGSRIIREQVSVELPAEVDSALAAAHTLGVTAAE 295 Query: 295 YIRFISNKNVFN 306 + +V + Sbjct: 296 ELLDDGAADVAD 307 >gi|301167270|emb|CBW26852.1| putative porphobilinogen deaminase [Bacteriovorax marinus SJ] Length = 512 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 80/317 (25%), Positives = 141/317 (44%), Gaps = 40/317 (12%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M KK ++IGTR S LA+ + + L + + + T+GD IT++ L ++ G Sbjct: 1 MSKKIYKIGTRGSLLAVTQCTQVKEELEKLT---GDQFELEIIKTQGDLITDKPLWQLDG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDV-FISHTAQSLK 119 K FT+E+++ L++ ++D VHS KD+ ++ +G++++A R D+ FI + Sbjct: 58 KDFFTKELDEALLTNKVDMVVHSYKDLGSERPQGIKLAAITKRHFAHDILFIKNETIKNL 117 Query: 120 DLALHSVIGTSSLRR----KALLLRWRSDISV----IDFRGKIETRLNKLNNNKAHAILL 171 ++GTSS RR +A L + ++ RG + TR+ KL + + AI+L Sbjct: 118 SNKKEFIVGTSSPRRIVNIEAQLSEYLPTDNIKVETKMLRGNVNTRIGKLVDGQYDAIVL 177 Query: 172 AYAGIKRLKKEKV------------IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219 A GI+RL + IL FP + QGA+ IE + N + + ++ Sbjct: 178 ALPGIERLAHSEKSLEELKVLLKDLNYMILPQSTFPSAASQGALAIECNEENTELYQKLQ 237 Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGK-------- 271 +I + T V+ ER G C A+ G + + GK Sbjct: 238 LIEDKVTVSEVSRERQAFNGYGGGCHLAVGVNVKRVGDN-----YIHSHRGKNEDKSISE 292 Query: 272 ---IFHEVSRNGNRCDA 285 + G++ +A Sbjct: 293 LRLESVSETFKGDKTNA 309 >gi|182415288|ref|YP_001820354.1| porphobilinogen deaminase [Opitutus terrae PB90-1] gi|177842502|gb|ACB76754.1| porphobilinogen deaminase [Opitutus terrae PB90-1] Length = 284 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 86/263 (32%), Positives = 121/263 (46%), Gaps = 17/263 (6%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K + TR SPLAL + L ++ L T GDR T +L + GGKG Sbjct: 1 MKKLILATRKSPLALRQTEMVAAHLEARL---GVQTELLKLVTTGDRQTEWSLEQKGGKG 57 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 LFT E+E L GE D AVHS KD+P + L ++ YLPR D RDV + +A Sbjct: 58 LFTSELENALRRGEADLAVHSTKDLPGDMAAELAVAGYLPRADARDVLVLRAG-----VA 112 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNKAHAILLAYAGIKRLK- 180 + T S RR+ + + ++ + RG ++TRL K+ A +LA AG+ RL Sbjct: 113 APKSLATGSPRRRLQIAKLYPGVTFTEIRGNVDTRLKKIGELGVADGTVLASAGLNRLGI 172 Query: 181 --KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 V L D P+ GQGAI ++ + + T +V+ ERAF A Sbjct: 173 GNWPGVEFHALGFNDMVPAVGQGAIAVQCRAADA---ARFAPVFDAATKRAVDVERAFQA 229 Query: 239 ELDGSCKSAIAGFAYCKGSTLYF 261 L C++A G TL+F Sbjct: 230 ALGVGCQTAFGAH--VAGDTLHF 250 >gi|297170423|gb|ADI21455.1| porphobilinogen deaminase [uncultured gamma proteobacterium HF0070_10G19] Length = 302 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 83/274 (30%), Positives = 137/274 (50%), Gaps = 10/274 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI R SPLA+ A + ++ + +IP+ + GD T++ L++IGGKGLF Sbjct: 3 IRIACRKSPLAVLQANKFIEAIQKKYG-KEIKCRLIPMHSAGDL-TDKDLSQIGGKGLFI 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI--SHTAQSLKDLAL 123 E+E L S D AVHS KD+P KL G +I + L R + DV I + ++DL Sbjct: 61 SELESALASDNADVAVHSLKDVPAKLNDGFEIISCLERGNPNDVIILKQNGPSVIQDLNN 120 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 HS I TSS RRKA + + RG I TR++K + +L+A ++RL ++ Sbjct: 121 HSKIATSSPRRKAQWKIYNPTFEFVPIRGNISTRISKFLESDLDGLLMAATALERLNIQE 180 Query: 184 VIKEILNIEDFPPSPGQGAICIETH--VNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + N +D PS QG I +E + + + +++++ +NH++++++ ER + LD Sbjct: 181 HHYDEFNYQDVVPSVCQGIIGMEIYLGTISQEKRQIIQSVNHQNSFNAALMEREIIKSLD 240 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275 C S I +Y +G ++ Sbjct: 241 ADCMSPIGVICR--DKMIYLDA--FNKEGTEIYQ 270 >gi|70606576|ref|YP_255446.1| porphobilinogen deaminase [Sulfolobus acidocaldarius DSM 639] gi|68567224|gb|AAY80153.1| porphobilinogen deaminase [Sulfolobus acidocaldarius DSM 639] Length = 296 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 86/295 (29%), Positives = 134/295 (45%), Gaps = 14/295 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI R S L+ L ++ +I + TK D ++ L +G KG+F Sbjct: 3 IRIAARGSLLSRIQVKMVEDKLRNL----GIETELIVVKTKADLFQDKPLNSLG-KGVFE 57 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +E+ + +I+GE D AVHS KDM + + + L + LPR+ D + + L ++ Sbjct: 58 KEVNEAVINGEADIAVHSMKDMLSDMDEKLVLYGVLPRDSPYDSLV--AEKDLFNIESGK 115 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 VIGTSS+RR++++ +R D+ V D RG I+TRL K + + I++A A IKRL V Sbjct: 116 VIGTSSIRRRSMISFYRRDLVVKDLRGNIDTRLKKYQSKEYDGIVIAEAAIKRLN-SVVR 174 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ + P QG I I N K + L + +N E T ER + L G C Sbjct: 175 YYKIDPKIITPEANQGIIAI-VGRVNEKLKTLFRELNDERTLKEALVERTVVKLLGGGCH 233 Query: 246 SAIAGFAYC--KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 S I A + V++ KI E G D +G + + Sbjct: 234 SPIGILASMISENEFNVISTYVISDKKKITIEGIYRG---DPTTVGEKVVKDMVK 285 >gi|111075012|gb|ABH04865.1| porphobilinogen deaminase [Heliobacillus mobilis] Length = 187 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 77/190 (40%), Positives = 110/190 (57%), Gaps = 5/190 (2%) Query: 1 ME--KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M ++P IGTR S LAL + L ++ P + + TKGD+I + L +I Sbjct: 1 MSVLQRPVVIGTRDSALALWQTNWVMARLKEL--FPEQAFEVKAIKTKGDKILDVALAKI 58 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G KGLFT+E+E ++ GEID AVHS KD+PT L +GL I A RED RD+ IS L Sbjct: 59 GDKGLFTKELEVSMLEGEIDMAVHSLKDLPTVLPEGLTIGAMCVREDCRDILISR-HGGL 117 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKR 178 L + +GT+SLRRKA + + R D+ ++D RG ++TRL K+ ++LA AG+ R Sbjct: 118 DALPQGARVGTASLRRKAQIWQVRPDLELLDIRGNLQTRLRKMEEQNLDGLILAAAGVIR 177 Query: 179 LKKEKVIKEI 188 L + I + Sbjct: 178 LGWAEKISQY 187 >gi|229822489|ref|YP_002884015.1| porphobilinogen deaminase [Beutenbergia cavernae DSM 12333] gi|229568402|gb|ACQ82253.1| porphobilinogen deaminase [Beutenbergia cavernae DSM 12333] Length = 334 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 88/294 (29%), Positives = 136/294 (46%), Gaps = 23/294 (7%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKI---PPHNIVIIPLSTKGDRITNRTLTEI 58 + R+GTR S LA + ++ + ++ ++T GD + +L + Sbjct: 18 STRTLRVGTRASALATTQSEWAGEAIAARVAAATGSDVEVELVRVTTTGD-VLTGSLASM 76 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GG G+F + + L+ G D AVHS KD+PT GL + A RED RDV + L Sbjct: 77 GGTGVFVTALREALLDGRCDVAVHSLKDLPTAAAPGLVLGAVPQREDPRDVLCARAGAGL 136 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKA--HAILLAYAGI 176 DL +GT S RR A L R R D+ ++D RG ++TRL++++ K A++LA AG+ Sbjct: 137 ADLPAGGRVGTGSPRRAAQLRRARPDLEIVDIRGNVDTRLSRISPGKGDLDAVVLARAGL 196 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHV-NNPKAQELVKVINHEDTWDSVNCERA 235 RL + + E L+ P+PGQGA+ +E ++ + T +V ERA Sbjct: 197 ARLGRLDAVTEALDAGVMVPAPGQGALAVEAVDAAPDWLLAGLRAFDDAPTRLAVTAERA 256 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 LA L+ C + + A GS L V DA ++G Sbjct: 257 MLARLEVGCSAPVGALATLAGSQLLLRTSVG----------------EDAEDLG 294 >gi|288920172|ref|ZP_06414488.1| porphobilinogen deaminase [Frankia sp. EUN1f] gi|288348422|gb|EFC82683.1| porphobilinogen deaminase [Frankia sp. EUN1f] Length = 395 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 118/206 (57%), Gaps = 4/206 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 ++P R+GTR S LALA + +L + ++P+ T GDR +++IGG Sbjct: 20 TRRPLRLGTRRSALALAQSGHVAEALRARL---GCQVELVPIVTDGDRSQG-AISQIGGT 75 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+F + + L+SGEID AVHS KD+PT GL ++A PR D RDV +S + + L L Sbjct: 76 GVFVSALREALLSGEIDLAVHSLKDLPTATPDGLVLAAVPPRVDTRDVLVSPSGRGLVKL 135 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 ++ IGT + RR A L V+ RG ++TR+ K + + A++LA+AG+ RL + Sbjct: 136 GPNARIGTGAPRRAAQLRAMGLGFDVVPIRGNVDTRIKKAIDGEVDAVILAHAGLARLDR 195 Query: 182 EKVIKEILNIEDFPPSPGQGAICIET 207 + EI+ E P+PGQGA+ IE Sbjct: 196 LDAVTEIIPSEVILPAPGQGALAIEC 221 Score = 69.0 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 16/99 (16%) Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC------------KG----STLYFYGIV 265 + + +V ERAFLA ++ C + + G L +V Sbjct: 293 DDAPSSVAVRAERAFLAGIEAGCTAPVGALGRVLPSTGSSPTTGGDGAPAVGDLRLRAVV 352 Query: 266 LASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 A DG G+ D +G+ A + + + Sbjct: 353 AAPDGSRVLRCELTGSAVDPEALGQRLADEMLSAGAQTL 391 >gi|330835713|ref|YP_004410441.1| porphobilinogen deaminase [Metallosphaera cuprina Ar-4] gi|329567852|gb|AEB95957.1| porphobilinogen deaminase [Metallosphaera cuprina Ar-4] Length = 289 Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 89/295 (30%), Positives = 131/295 (44%), Gaps = 15/295 (5%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 RI R S L++ S L + I + T+ D + L EIG KG+F Sbjct: 2 KVRIAARGSRLSVKQVETVSSYLNSR----GYETEFIEVKTRADLFSGTPLHEIG-KGVF 56 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ + ++ G+ D AVHS KD+ L +GL+I A RE+ DV + + L+++ Sbjct: 57 DKEVNEAVLIGKADLAVHSMKDLSA-LPEGLKILATPRRENPSDVLV--SDYELQEMPAG 113 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 S IGT SLRR L R D+ VI+ RG ++TR+ K + I+LA AG+ RL Sbjct: 114 SKIGTGSLRRTNFLKVLRPDLQVINLRGNVDTRIRKYLTREYDGIILAEAGLVRLGINVK 173 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 E L++ DF P QG I I P EL+K +N E T ER + + G C Sbjct: 174 RHE-LDVHDFTPEANQGIIAIV---GRPHLTELLKELNDEATMTVARAEREVVKVIGGGC 229 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 S + + GI SDG S + G+ + + Sbjct: 230 HSPLGVLFQMEDD--RLTGIASYSDGIRRVSASVSV-MDSPEAAGQALGRALLKE 281 >gi|315110126|gb|EFT82102.1| porphobilinogen deaminase [Propionibacterium acnes HL030PA2] Length = 315 Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 84/312 (26%), Positives = 131/312 (41%), Gaps = 32/312 (10%) Query: 22 ETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAV 81 L ++ + ++T GD + +L +GG G+F I L+ GE D AV Sbjct: 1 MVAGLLRS----EGLDVNLTTITTHGDT-STASLAAMGGIGVFASAIRAALLEGEADIAV 55 Query: 82 HSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRW 141 HS KD+PT GL I A R D RD ++ +L DL + +GT S RR A LL Sbjct: 56 HSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAV 115 Query: 142 RSDISVIDFRGKIETRLNKLN----------NNKAHAILLAYAGIKRLKKEKVIKEILNI 191 R D++++D RG ++TRL ++ A++LA +G+ RL + E L+ Sbjct: 116 RPDLTIVDIRGNVDTRLGRVKGLGRYAKNGGKEDLDAVVLAASGLARLGHSGAVTEFLDP 175 Query: 192 EDFPPSPGQGAICIETHVNNPKAQELV---KVINHEDTWDSVNCERAFLAELDGSCKSAI 248 P+P QGA+ +E + + + I+ T + ERA L+ L+ C + I Sbjct: 176 SVVLPAPAQGALAVECRTADSRHGKFAKALARIDDRRTRLAATAERAVLSHLEAGCAAPI 235 Query: 249 AGFAYCKG------STLYFYGIVLASDGKIFHE--------VSRNGNRCDAINIGRDAAQ 294 A K L +V A DG A +G AA+ Sbjct: 236 GALAQLKPVSGKSLQVLTLDVVVAAVDGSRTVREQVSVELPAEVEPALAAAHTLGVTAAE 295 Query: 295 YIRFISNKNVFN 306 + +V + Sbjct: 296 ELLDDGAADVAD 307 >gi|254445937|ref|ZP_05059413.1| porphobilinogen deaminase [Verrucomicrobiae bacterium DG1235] gi|198260245|gb|EDY84553.1| porphobilinogen deaminase [Verrucomicrobiae bacterium DG1235] Length = 291 Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 90/296 (30%), Positives = 137/296 (46%), Gaps = 18/296 (6%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + + I TR SPLA+A + +P I + T GD+ +L + GGKGL Sbjct: 6 REYVIATRKSPLAMAQTHLAKELFQR--GMPDAVFRIEKMVTTGDKRQEWSLEKQGGKGL 63 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+E+E L+ G D AVHSAKD+P+++ KGL ++ +LPR+ DV I + Sbjct: 64 FTKELEDALLEGRADFAVHSAKDLPSEMPKGLALAGFLPRQTCEDVLILRDG-----VES 118 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK--- 180 +I T S RR+ L + RG ++TRL K+ A A +LA AG+ RL Sbjct: 119 PKLIATGSPRRRIQLRYLFPKAEFTEIRGNVDTRLTKIARGDADATVLASAGLNRLGIES 178 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 E V L +++ P+ GQ A+ I+ + + + E+T +VN ER+FL EL Sbjct: 179 WEGVTFRKLTLDECVPAVGQAAVAIQC---REEDVDTFRAHLDEETAIAVNLERSFLEEL 235 Query: 241 DGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 G C+ A A G L GK ++ + I + + Sbjct: 236 GGGCQVAFAV--NYVGGRLRI---YHKQCGKEVRDLPQEYVATHYEQIAAKLIEQL 286 >gi|314964545|gb|EFT08645.1| porphobilinogen deaminase [Propionibacterium acnes HL082PA1] Length = 315 Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats. Identities = 85/312 (27%), Positives = 132/312 (42%), Gaps = 32/312 (10%) Query: 22 ETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAV 81 L ++ + ++T GD + +L +GG G+F I L+ GE D AV Sbjct: 1 MVAGLLRS----EGLDVNLTTITTHGDT-STASLAAMGGIGVFASAIRAALLEGETDIAV 55 Query: 82 HSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRW 141 HS KD+PT GL I A R D RD ++ +L DL + +GT S RR A LL Sbjct: 56 HSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAV 115 Query: 142 RSDISVIDFRGKIETRLNKLN----------NNKAHAILLAYAGIKRLKKEKVIKEILNI 191 R D++++D RG ++TRL ++ A++LA +G+ RL + E L+ Sbjct: 116 RPDLTIVDIRGNVDTRLGRVKGLGRYAKNGGKEDLDAVVLAASGLARLGHSGAVTEFLDP 175 Query: 192 EDFPPSPGQGAICIETHVNNPKAQELV---KVINHEDTWDSVNCERAFLAELDGSCKSAI 248 P+P QGA+ +E + + +L I+ T + ERA L+ L+ C + I Sbjct: 176 SVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTRLAATAERAVLSHLEAGCAAPI 235 Query: 249 AGFAYCKG------STLYFYGIVLASDGKIFHE--------VSRNGNRCDAINIGRDAAQ 294 A K L +V A DG A +G AA+ Sbjct: 236 GALAQLKPVSGKSLQVLTLDVVVAAVDGSRTVREQVSVELPAEVEPALAAAHTLGVTAAE 295 Query: 295 YIRFISNKNVFN 306 + +V + Sbjct: 296 ELLDDGAADVAD 307 >gi|313765242|gb|EFS36606.1| porphobilinogen deaminase [Propionibacterium acnes HL013PA1] gi|313793133|gb|EFS41200.1| porphobilinogen deaminase [Propionibacterium acnes HL110PA1] gi|313821951|gb|EFS59665.1| porphobilinogen deaminase [Propionibacterium acnes HL036PA1] gi|313834370|gb|EFS72084.1| porphobilinogen deaminase [Propionibacterium acnes HL056PA1] gi|314926611|gb|EFS90442.1| porphobilinogen deaminase [Propionibacterium acnes HL036PA3] gi|314931036|gb|EFS94867.1| porphobilinogen deaminase [Propionibacterium acnes HL067PA1] gi|314969645|gb|EFT13743.1| porphobilinogen deaminase [Propionibacterium acnes HL037PA1] gi|314974711|gb|EFT18806.1| porphobilinogen deaminase [Propionibacterium acnes HL053PA1] gi|314980332|gb|EFT24426.1| porphobilinogen deaminase [Propionibacterium acnes HL072PA2] gi|314985507|gb|EFT29599.1| porphobilinogen deaminase [Propionibacterium acnes HL005PA1] gi|314987331|gb|EFT31422.1| porphobilinogen deaminase [Propionibacterium acnes HL005PA2] gi|315082096|gb|EFT54072.1| porphobilinogen deaminase [Propionibacterium acnes HL078PA1] gi|315097342|gb|EFT69318.1| porphobilinogen deaminase [Propionibacterium acnes HL038PA1] gi|315099447|gb|EFT71423.1| porphobilinogen deaminase [Propionibacterium acnes HL059PA2] gi|315106337|gb|EFT78313.1| porphobilinogen deaminase [Propionibacterium acnes HL030PA1] gi|327445624|gb|EGE92278.1| porphobilinogen deaminase [Propionibacterium acnes HL013PA2] gi|327447246|gb|EGE93900.1| porphobilinogen deaminase [Propionibacterium acnes HL043PA1] gi|327457080|gb|EGF03735.1| porphobilinogen deaminase [Propionibacterium acnes HL092PA1] gi|328758364|gb|EGF71980.1| porphobilinogen deaminase [Propionibacterium acnes HL020PA1] Length = 315 Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats. Identities = 85/312 (27%), Positives = 132/312 (42%), Gaps = 32/312 (10%) Query: 22 ETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAV 81 L ++ + ++T GD + +L +GG G+F I L+ GE D AV Sbjct: 1 MVAGLLRS----EGLDVNLTTITTHGDT-STASLAAMGGIGVFASAIRAALLEGEADIAV 55 Query: 82 HSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRW 141 HS KD+PT GL I A R D RD ++ +L DL + +GT S RR A LL Sbjct: 56 HSFKDLPTGRPLGLAIGAVPARADPRDALVARDGLTLHDLPQEASVGTGSPRRAAQLLAV 115 Query: 142 RSDISVIDFRGKIETRLNKLN----------NNKAHAILLAYAGIKRLKKEKVIKEILNI 191 R D++++D RG ++TRL ++ A++LA +G+ RL + E L+ Sbjct: 116 RPDLTIVDIRGNVDTRLGRVKGLGRYAKNGGKEDLDAVVLAASGLARLGHSGAVTEFLDP 175 Query: 192 EDFPPSPGQGAICIETHVNNPKAQELV---KVINHEDTWDSVNCERAFLAELDGSCKSAI 248 P+P QGA+ +E + + +L I+ T + ERA L+ L+ C + I Sbjct: 176 SVVLPAPAQGALAVECRTADSRHGKLAKALARIDDRRTRLAATAERAVLSHLEAGCAAPI 235 Query: 249 AGFAYCKG------STLYFYGIVLASDGKIFHE--------VSRNGNRCDAINIGRDAAQ 294 A K L +V A DG A +G AA+ Sbjct: 236 GALAQLKPVSGKSLQVLTLDVVVAAVDGSRTVREQVSVELPAEVEPALAAAHTLGVTAAE 295 Query: 295 YIRFISNKNVFN 306 + +V + Sbjct: 296 ELLDDGAADVAD 307 >gi|123210216|emb|CAM15096.1| hydroxymethylbilane synthase [Danio rerio] Length = 247 Score = 153 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 88/230 (38%), Positives = 126/230 (54%), Gaps = 6/230 (2%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA +L ++ P ++ I+ +ST GD+I + L++IG K L Sbjct: 20 RVIRMGTRKSQLARIQTDSVAGTLKQLY--PDVHLEIVAMSTIGDKILDTALSKIGEKSL 77 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLKD 120 FT+E+E L E+D VHS KD+PT L G I A L RE+ D + H +L Sbjct: 78 FTKELENALERNEVDIVVHSLKDLPTSLPPGFTIGAILERENPHDAVVLHPKNAGLTLDS 137 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN-NNKAHAILLAYAGIKRL 179 L SVIGTSSLRR A L + + + RG + TRL KL+ + AI+LA AG+KR+ Sbjct: 138 LPEKSVIGTSSLRRAAQLKKRFPQLEFENIRGNLNTRLKKLDEKDDYAAIILAAAGLKRM 197 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 E I ++L ED + GQGA+ +E + E+V V++H DT Sbjct: 198 GWESRISQVLGPEDCMYAVGQGALAVEVRAQDKDILEMVSVLHHPDTVLR 247 >gi|213583404|ref|ZP_03365230.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 206 Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats. Identities = 84/202 (41%), Positives = 118/202 (58%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P Sbjct: 5 PGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVHSMKDVPVAFPD 64 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL DL S++GTSSLRR+ L R D+ + RG Sbjct: 65 GLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + TRL KL+N AI+LA AG+KRL E I+ L + P+ GQGA+ IE +++ + Sbjct: 125 VGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTALPPDVSLPAVGQGAVGIECRLDDAR 184 Query: 214 AQELVKVINHEDTWDSVNCERA 235 Q L+ +NH T V ERA Sbjct: 185 TQALLAPLNHSQTALRVTAERA 206 >gi|28572887|ref|NP_789667.1| porphobilinogen deaminase [Tropheryma whipplei TW08/27] gi|28411020|emb|CAD67405.1| porphobilinogen deaminase [Tropheryma whipplei TW08/27] Length = 321 Score = 152 bits (383), Expect = 8e-35, Method: Composition-based stats. Identities = 93/331 (28%), Positives = 147/331 (44%), Gaps = 44/331 (13%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA A + + ++ DV + ++I S + G F Sbjct: 3 PLRIGTRSSLLATAQTAQVQKTMRDVFLLDTQQVLIQTGSVR------------RRDGSF 50 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L+ GE D AVHS KD+P +G I+A LPRED DV + +L L Sbjct: 51 VAALRTALLEGECDLAVHSLKDIPIAPHEGTLITAVLPREDPCDVLCARKDLTLTTLPSG 110 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT+S RR+A +L +R D+ V+ RG I+ RL L+ AI+L+ AG+KR+ +E Sbjct: 111 AKVGTASARRRAQILNFRPDLDVVSLRGNIDKRLIHLDT--LDAIVLSAAGLKRIDREDA 168 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELV----KVINHEDTWDSVNCERAFLAEL 240 I E +I D+P + GQG++ IE + +++ + ER L+ L Sbjct: 169 ITESFDIHDWPTAAGQGSLAIEVCRAQLDDPQNRVAVTYRLDNPMARVTTTAERGVLSLL 228 Query: 241 DGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEV--------------------SR 278 C S IA A +L + V + DGKIF E S Sbjct: 229 QADCFSPIAVHAVYTANDKSLRLHAKVFSRDGKIFCESIRFARLVKQLTDTNQNHTKNSG 288 Query: 279 NGNRCDAINIGRDAAQ----YIRFISNKNVF 305 + + +A+ + A+ + + + + Sbjct: 289 SDDIGNALEVAMTLAKTVVDELLSKNAREIL 319 >gi|300709477|ref|YP_003735291.1| porphobilinogen deaminase [Halalkalicoccus jeotgali B3] gi|299123160|gb|ADJ13499.1| porphobilinogen deaminase [Halalkalicoccus jeotgali B3] Length = 379 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 88/337 (26%), Positives = 146/337 (43%), Gaps = 60/337 (17%) Query: 1 MEKK--PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M + P R+ TR S LALA A + +L + + ++ + T GDRI + + + Sbjct: 1 MTTRSDPIRLATRGSDLALAQAESVKRALSGRRR----EVELVTVETTGDRIDDELIHRL 56 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G G F +++K+++G+++ A+HS KDMPT+ + + A R D ++ + L Sbjct: 57 GKTGAFVHSLDEKVLAGDVEGAIHSMKDMPTEESQLVVA-AVPERATAGDRLVTPDGKPL 115 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL----------------- 161 +L + +GT SLRR A LL R D++V RG ++TR+ KL Sbjct: 116 AELPEGATVGTGSLRRGAQLLAQRPDLTVEPLRGNVDTRVEKLLSKSLNEEYDRRVAADE 175 Query: 162 ----------------------------------NNNKAHAILLAYAGIKRLKKEKV-IK 186 + AI+LA AG++R ++ Sbjct: 176 QRKANTDDDFEPEFDRRPEEWIEGLSERERQAFERSESFDAIVLAAAGLERSGLDREIPT 235 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 L E F P+ GQGA+ + T + A+E+ + ++H + ER LA L G C + Sbjct: 236 SDLPTESFVPAAGQGALAV-TMADGDLAREVNEALDHPRSRVETTVERTVLATLGGGCVA 294 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283 I A +G + VLA G+ V+R+ Sbjct: 295 PIGIHAVIQGEHVRTRVQVLARGGEPTISVTRDLPVK 331 >gi|294054671|ref|YP_003548329.1| porphobilinogen deaminase [Coraliomargarita akajimensis DSM 45221] gi|293614004|gb|ADE54159.1| porphobilinogen deaminase [Coraliomargarita akajimensis DSM 45221] Length = 284 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 91/255 (35%), Positives = 128/255 (50%), Gaps = 17/255 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M I TR SPLAL R+ L + K+P + + L+T+ D + +L + GG Sbjct: 1 MS---ILIATRKSPLALKQTEMVRAWLAE--KLPNDHYEELQLTTQVDERLSWSLEKRGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 GLFT+E+E+ L++ + AVHSAKDMPT L I+ YLPR DV + + + Sbjct: 56 IGLFTKELEEALLANKATLAVHSAKDMPTTFQDDLCIAGYLPRARANDVIVKRS-----E 110 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNKAHAILLAYAGIKRL 179 + I TSS RR+A L +D RG + TRL K+ +A A LLA AG+ RL Sbjct: 111 IESPKRIATSSPRRRAQLALLNNDAEWTTLRGNVGTRLRKIAEAQEADATLLAAAGLNRL 170 Query: 180 K---KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 + + L IE P+PGQ AI I+ K E + + EDT +V ER F Sbjct: 171 DIQSYDGLDFIELPIEQMVPAPGQAAIAIQC---REKDLEKYQDLFCEDTKLAVTLEREF 227 Query: 237 LAELDGSCKSAIAGF 251 L L G C++ + Sbjct: 228 LHRLGGGCQTPVGAH 242 >gi|292654255|ref|YP_003534152.1| porphobilinogen deaminase [Haloferax volcanii DS2] gi|291372938|gb|ADE05165.1| porphobilinogen deaminase [Haloferax volcanii DS2] Length = 363 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 93/361 (25%), Positives = 150/361 (41%), Gaps = 61/361 (16%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M R+ TR S LA A A + +L ++ ++ + T GDRI + + +G Sbjct: 1 MTT-TLRLATRGSALARAQAASVQGALAGRR----LDVELVEVETTGDRIQDELIHRLGK 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G F ++++++ GE+D AVHS KDMPT+ L ++ R DV ++ + D Sbjct: 56 TGAFVRALDERVLDGEVDAAVHSMKDMPTEKPADLVVAGVPERAPAGDVLVTAEGHDIDD 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL------------------- 161 L +V+GTSSLRR+A LL +R D+ V RG ++TR+ KL Sbjct: 116 LPEGAVVGTSSLRRQAQLLNYRDDLEVEPLRGNVDTRIEKLLATHLQREHEARVENDKER 175 Query: 162 ---------NNNKAHAILLAYAGIKRLKK---------------------------EKVI 185 + + G+ L++ EKV Sbjct: 176 QGKKGKTDHDEAFDETADEWFEGLTELERQALGRQVETEYDAIVLAEAGLKRSGLTEKVN 235 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 E L F P+PGQGAI + + + + ++H T ER LAEL G C Sbjct: 236 YERLPRTTFVPAPGQGAIAVTAADSV-VIELIRDKLDHPRTRVETTVERTILAELGGGCI 294 Query: 246 SAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + + A +G ++ VLA+DG + SR+ + N R+ A + + Sbjct: 295 APVGVHALLQGEHVHVDVQVLATDGSESIKTSRDLPVGNHANAAREFAAALCDRGAGQLV 354 Query: 306 N 306 + Sbjct: 355 D 355 >gi|307699958|ref|ZP_07637009.1| hydroxymethylbilane synthase [Mobiluncus mulieris FB024-16] gi|307614996|gb|EFN94214.1| hydroxymethylbilane synthase [Mobiluncus mulieris FB024-16] Length = 360 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 94/345 (27%), Positives = 143/345 (41%), Gaps = 51/345 (14%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++P IGTR S LAL + L + I T+GD +L+ +GG G Sbjct: 8 QRPLVIGTRGSKLALTQTRMVAADLEQR----GLAVRIETFVTEGDTNR-ASLSSLGGVG 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F + L+ G D VHS KD+PT + GL ++A R D DV ++ L DL Sbjct: 63 VFAAALRVALLEGRCDLVVHSLKDLPTVEVPGLVVAAIPARVDPADVLVARDGLRLADLP 122 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------------NNKA 166 + +GT S RR L R D+S++D RG + TR+ ++ Sbjct: 123 AAARVGTGSPRRARQLAAARPDLSLVDIRGNVPTRIGRVRGLGTRAEQIGLDQGRAKEDL 182 Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV------KV 220 A++LA AG++RL E V + L+ E P+ GQGA+ +ET + A+E ++ Sbjct: 183 DAVVLARAGLRRLGVEDVATDDLS-ETILPAGGQGALALETVADGLAAEEGRILAQTLRI 241 Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK---------GSTLYFYGIVLASDGK 271 ++ E T V+ ERA L L+ C + + L V+ +G Sbjct: 242 VDDEPTRLEVSAERALLRYLEAGCAAPLGVRGQLTWENNATELLAGVLELRARVVGDNG- 300 Query: 272 IFHEVSRN-----GNRCD--------AINIGRDAAQYIRFISNKN 303 EVS G D A +G D A + Sbjct: 301 ESVEVSGETTVLLGTDADQRDFALAAAEQLGVDLATELLANGAGE 345 >gi|306817540|ref|ZP_07451283.1| hydroxymethylbilane synthase [Mobiluncus mulieris ATCC 35239] gi|304649582|gb|EFM46864.1| hydroxymethylbilane synthase [Mobiluncus mulieris ATCC 35239] Length = 360 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 94/345 (27%), Positives = 143/345 (41%), Gaps = 51/345 (14%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++P IGTR S LAL + L + I T+GD +L+ +GG G Sbjct: 8 QRPLVIGTRGSKLALTQTQMVAADLEQR----GLAVRIETFVTEGDTNR-ASLSSLGGVG 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F + L+ G D VHS KD+PT + GL ++A R D DV ++ L DL Sbjct: 63 VFAAALRVALLEGRCDLVVHSLKDLPTVEVPGLVVAAIPARVDPADVLVARDGLRLADLP 122 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------------NNKA 166 + +GT S RR L R D+S++D RG + TR+ ++ Sbjct: 123 AAARVGTGSPRRARQLAAARPDLSLVDIRGNVPTRIGRVRGLGTRAEQIGLDQDRAKEDL 182 Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV------KV 220 A++LA AG++RL E V + L+ E P+ GQGA+ +ET + A+E ++ Sbjct: 183 DAVVLARAGLRRLGVEDVATDDLS-ETILPAGGQGALALETVADGLAAEEGRILAQTLRI 241 Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK---------GSTLYFYGIVLASDGK 271 ++ E T V+ ERA L L+ C + + L V+ +G Sbjct: 242 VDDEPTRLEVSAERALLRYLEAGCAAPLGVRGQLTWENNATELLAGVLELRARVVGDNG- 300 Query: 272 IFHEVSRN-----GNRCD--------AINIGRDAAQYIRFISNKN 303 EVS G D A +G D A + Sbjct: 301 ESVEVSGETTVLLGTDADQRDFALAAAEQLGVDLATELLANGAGE 345 >gi|269977777|ref|ZP_06184737.1| porphobilinogen deaminase [Mobiluncus mulieris 28-1] gi|269934081|gb|EEZ90655.1| porphobilinogen deaminase [Mobiluncus mulieris 28-1] Length = 360 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 94/345 (27%), Positives = 143/345 (41%), Gaps = 51/345 (14%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++P IGTR S LAL + L + I T+GD +L+ +GG G Sbjct: 8 QRPLVIGTRGSKLALTQTRMVAADLEQR----GLAVRIETFVTEGDTNR-ASLSSLGGVG 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F + L+ G D VHS KD+PT + GL ++A R D DV ++ L DL Sbjct: 63 VFAAALRVALLEGRCDLVVHSLKDLPTVEVPGLVVAAIPARVDPADVLVARDGLRLADLP 122 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------------NNKA 166 + +GT S RR L R D+S++D RG + TR+ ++ Sbjct: 123 AAARVGTGSPRRARQLAAARPDLSLVDIRGNVPTRIGRVRGLGTRAEQIGLDQGRAKEDL 182 Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV------KV 220 A++LA AG++RL E V + L+ E P+ GQGA+ +ET + A+E ++ Sbjct: 183 DAVVLARAGLRRLGVEDVATDDLS-ETILPAGGQGALALETVADGLAAEEGRILAQTLRI 241 Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK---------GSTLYFYGIVLASDGK 271 ++ E T V+ ERA L L+ C + + L V+ +G Sbjct: 242 VDDEPTRLEVSAERALLRYLEAGCAAPLGVRGQLTWENNATELLAGVLELRARVVGDNG- 300 Query: 272 IFHEVSRN-----GNRCD--------AINIGRDAAQYIRFISNKN 303 EVS G D A +G D A + Sbjct: 301 ESVEVSGETTVLLGTDADQRDFALAAAEQLGVDLATELLANGAGE 345 >gi|227876587|ref|ZP_03994697.1| porphobilinogen deaminase [Mobiluncus mulieris ATCC 35243] gi|227842788|gb|EEJ52987.1| porphobilinogen deaminase [Mobiluncus mulieris ATCC 35243] Length = 360 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 94/345 (27%), Positives = 143/345 (41%), Gaps = 51/345 (14%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++P IGTR S LAL + L + I T+GD +L+ +GG G Sbjct: 8 QRPLVIGTRGSKLALTQTRMVAADLEQR----GLAVRIETFVTEGDTNR-ASLSSLGGVG 62 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F + L+ G D VHS KD+PT + GL ++A R D DV ++ L DL Sbjct: 63 VFAAALRVALLEGRCDLVVHSLKDLPTVEVPGLVVAAIPARVDPADVLVARDGLRLADLP 122 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN----------------NNKA 166 + +GT S RR L R D+S++D RG + TR+ ++ Sbjct: 123 AAARVGTGSPRRARQLAAARPDLSLVDIRGNVPTRIGRVRGLGTRAEQIGLDQGRAKEDL 182 Query: 167 HAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV------KV 220 A++LA AG++RL E V + L+ E P+ GQGA+ +ET + A+E ++ Sbjct: 183 DAVVLARAGLRRLGVEDVATDDLS-ETILPAGGQGALALETVADGLAAEEGRILAQTLRI 241 Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK---------GSTLYFYGIVLASDGK 271 ++ E T V+ ERA L L+ C + + L V+ +G Sbjct: 242 VDDEPTRLEVSAERALLRYLEAGCAAPLGVRGQLTWENNATELLAGVLELRARVVGDNG- 300 Query: 272 IFHEVSRN-----GNRCD--------AINIGRDAAQYIRFISNKN 303 EVS G D A +G D A + Sbjct: 301 ESVEVSGETTVLLGTDADQRDFALAAAEQLGVDLATELLANGAGE 345 >gi|13541465|ref|NP_111153.1| porphobilinogen deaminase [Thermoplasma volcanium GSS1] gi|25453027|sp|Q97B26|HEM3_THEVO RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|14324849|dbj|BAB59775.1| hydroxymethylbilane synthase [Thermoplasma volcanium GSS1] Length = 297 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 82/266 (30%), Positives = 134/266 (50%), Gaps = 8/266 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +IGTR S LA+A A SSL + + I+ + GD T + IG G+F Sbjct: 2 KIKIGTRPSNLAVAQANMVASSLEAI----GIDTEIVKHRSAGDIDTKNPIYSIGKTGVF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +++ ++ GEID AVHSAKD+P+++ L I+A L R D +S L+ L + Sbjct: 58 VQDLNNMILRGEIDVAVHSAKDIPSEIENRLTIAATLKRGSFNDALVSKY--DLRSLPIS 115 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GTSS+RR L R D+ + RG IETR+ K++ AI++A A I+RL V Sbjct: 116 AKVGTSSIRRIFQLKYARQDLKFENIRGNIETRIAKMSELGLDAIVMAEAAIQRLG-LNV 174 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 L+ F P+P QG I + + +++++ IN E+T++ + ER+ + +L C Sbjct: 175 EYSKLDENKFVPAPNQGIIAVVSKKEGT-VRKILEEINDENTFEEMQIERSVVQQLKLGC 233 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDG 270 + + + G + G Sbjct: 234 STPVGILSRPSGKGHKIIAQFFSMQG 259 >gi|302521530|ref|ZP_07273872.1| porphobilinogen deaminase [Streptomyces sp. SPB78] gi|302430425|gb|EFL02241.1| porphobilinogen deaminase [Streptomyces sp. SPB78] Length = 331 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 85/306 (27%), Positives = 127/306 (41%), Gaps = 14/306 (4%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRT----LTEIGGK 61 +G+R S LA A E ++P V ++ GD + +T G Sbjct: 29 VTVGSRGSALARAQVREMVERWER--EVPGVRFVRRVITEAGDADRSTPTVAGVTRRAGA 86 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQI-SAYLPREDIRDVFISHTAQSLKD 120 F+ E L+ GE+D VH KD+PT G + PRED+RD +L Sbjct: 87 SAFSSRQEAALVRGEVDVVVHCLKDLPTAPAPGTVLLRTPGPREDVRDAL---CGATLAG 143 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L + +GT S RR A LL R D+ V+ RG + RL + A++LA G+ RL Sbjct: 144 LPTGARVGTGSTRRVAQLLALRPDLEVVPVRGNVPARLAR--TRTLDAVVLAAVGLHRLG 201 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 I E L+ E +PP+PGQGA+ I+ + +A L+ T V ER LAEL Sbjct: 202 LADEITEYLDPEAYPPAPGQGALAIQVR-EDSEAARLLAASGDAATDAEVRAERVLLAEL 260 Query: 241 DGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 G C + + + + L + V DG + G + + A + Sbjct: 261 HGGCSVPLGTWTSRPSPTLLRLHAAVTTPDGTHQIAATAQGPSAEPEKLALTVAASLLAQ 320 Query: 300 SNKNVF 305 + Sbjct: 321 GAARIL 326 >gi|28493699|ref|NP_787860.1| porphobilinogen deaminase [Tropheryma whipplei str. Twist] gi|28476741|gb|AAO44829.1| porphobilinogen deaminase [Tropheryma whipplei str. Twist] Length = 321 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 93/331 (28%), Positives = 147/331 (44%), Gaps = 44/331 (13%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA A + + ++ DV + ++I S + G F Sbjct: 3 PLRIGTRSSLLATAQTAQVQKTMRDVFLLDTQQVLIQTGSVR------------RRDGSF 50 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 + L+ GE D AVHS KD+P +G I+A LPRED DV + +L L Sbjct: 51 VAALRTALLEGECDLAVHSLKDIPIAPHEGTLITAVLPREDPCDVLCARKDLTLTTLPSG 110 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 + +GT+S RR+A +L +R D+ V+ RG I+ RL L+ AI+L+ AG+KR+ +E Sbjct: 111 AKVGTASARRRAQILNFRPDLDVVSLRGNIDKRLIHLDT--LDAIVLSAAGLKRIDREDA 168 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELV----KVINHEDTWDSVNCERAFLAEL 240 I E +I D+P + GQG++ IE + +++ + ER L+ L Sbjct: 169 ITESFDIHDWPTAAGQGSLAIEVCRAQLDDPQNRVAVTYRLDNPMARVTTTAERGVLSLL 228 Query: 241 DGSCKSAIAGFAYC--KGSTLYFYGIVLASDGKIFHEV--------------------SR 278 C S IA A +L + V + DGKIF E S Sbjct: 229 QADCFSPIAVHAVYTANDKSLGLHAKVFSRDGKIFCESIRFARLVKQLTDTNQNHTKNSG 288 Query: 279 NGNRCDAINIGRDAAQ----YIRFISNKNVF 305 + + +A+ + A+ + + + + Sbjct: 289 SDDIGNALEVAMTLAKTVVDELLSKNAREIL 319 >gi|256833700|ref|YP_003162427.1| porphobilinogen deaminase [Jonesia denitrificans DSM 20603] gi|256687231|gb|ACV10124.1| porphobilinogen deaminase [Jonesia denitrificans DSM 20603] Length = 344 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 94/349 (26%), Positives = 147/349 (42%), Gaps = 51/349 (14%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M R+GTR S LA A + T + + + + + T GD + +L +GG Sbjct: 1 MTS--LRLGTRASALATAQSRATAALIAQAT---GVTVDLTHIRTDGD-VLTGSLATMGG 54 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F I + L++G+ID AVHS KD+PT +G I RE+ +D S +SL Sbjct: 55 AGVFVTAIRQALLAGDIDIAVHSLKDLPTTPHEGTTII-VPERENPQDALCSRHGESLAH 113 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL---------NNNKAHAILL 171 L +++GT S RR A LL R D+ ++D RG ++TRL ++ N A++L Sbjct: 114 LPHGALVGTGSPRRAAQLLVARPDLRIVDIRGNVDTRLARVGLSTADKPHIRNDLDAVVL 173 Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ----ELVKVINHEDTW 227 A AG++RL + VI E+L P+PGQGA+ IE + ++ ++H+ T Sbjct: 174 AAAGLRRLGRAHVISELLPPTSMLPAPGQGALAIEVRHDMADHHPSILAGIRTLHHQPTA 233 Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS------------------- 268 +V ERA L L+ C + + A +TL L Sbjct: 234 YAVAAERAVLRHLEAGCAAPVGALATMHNTTLTLTATALDPRLTPTAHTPTPSTTTDINA 293 Query: 269 ---------DGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISNKNVF 305 D + ++ DA G A + Sbjct: 294 APTPMTAPADARPPIRLTHTHTVTSENDATEAGITLATTLLTHGAAEFL 342 >gi|148693634|gb|EDL25581.1| mCG10727, isoform CRA_b [Mus musculus] Length = 208 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 29/213 (13%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA + L ++ P II +ST GD+I + L++IG K Sbjct: 17 KMRVIRVGTRKSQLARIQTDTVVAMLKALY--PGIQFEIIAMSTTGDKILDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H Sbjct: 75 SLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFI---- 130 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLK 180 ++ RG + TRL KL+ + AI+LA AG++R+ Sbjct: 131 ----------------------GKTLETLRGNLNTRLRKLDELQEFSAIVLAVAGLQRMG 168 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 + + +IL+ E+ + GQ A+ +E + Sbjct: 169 WQNRVGQILHPEECMYAVGQVALAVEVRAKDQD 201 >gi|167535436|ref|XP_001749392.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772258|gb|EDQ85913.1| predicted protein [Monosiga brevicollis MX1] Length = 643 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 74/212 (34%), Positives = 106/212 (50%), Gaps = 8/212 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RIGTR S LA+ L H P ++PLST GD L + G+FT Sbjct: 417 IRIGTRSSVLAMWQTRWVVERLTRAH--PGVRFSVVPLSTVGDANLTLDLNKFSTTGIFT 474 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL---- 121 + + + L++ E+D VHS KD+P+ + G Q++A PRED RDV + H S Sbjct: 475 DALVRALLAQEVDILVHSLKDLPSTISPGTQLAAIGPREDPRDVVVFHHRHSEIKDLAQL 534 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIKRL 179 +V+GTSS RR+A L + RG + TRL KL++ N A+ LA AG+ RL Sbjct: 535 PAGAVVGTSSTRRRAQLAAAYPQLRFAPVRGNVMTRLRKLDDPANGYDALCLAAAGLIRL 594 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNN 211 E I + L + + GQGA+ I+ + Sbjct: 595 GLEARIGQFLPLTVSRHAIGQGALGIQVGPAH 626 >gi|164661463|ref|XP_001731854.1| hypothetical protein MGL_1122 [Malassezia globosa CBS 7966] gi|159105755|gb|EDP44640.1| hypothetical protein MGL_1122 [Malassezia globosa CBS 7966] Length = 530 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 91/391 (23%), Positives = 156/391 (39%), Gaps = 90/391 (23%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHK------------IP------------------ 34 + +R S LA+ A + + L + P Sbjct: 89 TLVLSSRKSELAVRQATQVQMLLDTRYGRASPVFAPGADQWPSTEVANIRAFLRTFSPDQ 148 Query: 35 ----PHNIVIIPLSTKGDRITNRTLTEIGG--KGLFTEEIEKKLISGEIDCAVHSAKDMP 88 P + + ++T GD+ L IGG + ++T+E+E L++G +D VHS KD+P Sbjct: 149 KDVRPVDFPVRTMATLGDQNLKSPLYVIGGEGRAIWTKELEVALMAGGVDAIVHSLKDVP 208 Query: 89 TKLLKGLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDI 145 T + G++++A L RED RD + +SL+++ SVIGTSS+RR +LL R + Sbjct: 209 TTMPDGVELAAILEREDPRDALVVKENLPYKSLQEMPQGSVIGTSSVRRVSLLRRAYPHL 268 Query: 146 SVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAI 203 D RG I TRL KL+ + A++LA AG+KR+ E I ++ + GQG++ Sbjct: 269 MFSDVRGNINTRLAKLDAADGPYTALVLAAAGLKRMDLEHRITAYVSEPVMLHAVGQGSL 328 Query: 204 CIETHVNNPKAQELVKVIN-------HEDTWDSVNCERAFLAELDGSCKSAIAG------ 250 IE ++ E + I + ERA + ++G C + Sbjct: 329 AIEVRTPRGESAERDERIRRMIRSISNWRATWRCVAERALMHRMEGGCSIPLGVSTRFED 388 Query: 251 FAYCK--------------------------------GSTLYFYGIVLASDGKIFHEVSR 278 A + GS L ++++ DG + S Sbjct: 389 HADIEGLLNERNETPSEMASAGISRPDIRIAHEPPPQGSFLTMAAVIVSLDGTRMCKHSH 448 Query: 279 N---GNRCDAINIGRDAAQYI-RFISNKNVF 305 + DA +G A+ + + + + Sbjct: 449 TQLCRSEKDAEQLGILVAEELEHHQNARAIL 479 >gi|19849545|gb|AAL12221.1| porphobilinogen deaminase [Triticum aestivum] Length = 198 Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats. Identities = 77/156 (49%), Positives = 103/156 (66%), Gaps = 2/156 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A +TR L H I II + T GD I ++ L +IGGKGL Sbjct: 43 IRIGTRGSPLALAQARQTRDELKAAHTELAEDGAIEIIIIKTTGDMILDKPLADIGGKGL 102 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI+ L+ G ID AVHS KD+PT L +G+ + LPRED+RD FI TA++L +L Sbjct: 103 FTKEIDDALLEGSIDIAVHSMKDVPTYLPEGMILPCNLPREDVRDAFICLTAKTLGELPA 162 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLN 159 SVIG++SLRR++ +L + V++FRG ++TRL Sbjct: 163 GSVIGSASLRRQSQILYKYPSLKVVNFRGNVQTRLR 198 >gi|332295808|ref|YP_004437731.1| porphobilinogen deaminase [Thermodesulfobium narugense DSM 14796] gi|332178911|gb|AEE14600.1| porphobilinogen deaminase [Thermodesulfobium narugense DSM 14796] Length = 297 Score = 146 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 88/301 (29%), Positives = 141/301 (46%), Gaps = 11/301 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ IGTR S LAL A + I II GD+ L E Sbjct: 1 MIER-IVIGTRGSKLALTQARYVAEFINKFDSTIKIEIKIIKT--TGDK-LMVALHEAPE 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQS 117 +GLF +EIE+ L++ +ID AVHS KDMP + + L+I A RED DV + ++ Sbjct: 57 RGLFVKEIEEALLNKDIDLAVHSMKDMPAEAVSELEIFAVPVREDPSDVIVPRKELSIEN 116 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIK 177 L D++ +SV TSSLRR +LL + + + D RG I+TRL KL+ +++A A + Sbjct: 117 LDDISPNSVFATSSLRRISLLNNFFTFKEIKDIRGNIDTRLKKLDEGFCDYLIMAKAALN 176 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIE-THVNNPKAQELVKVINHEDTWDSVNCERAF 236 RL K L+ F P+ QGA+ I+ + + +++K ++ +T S + ER Sbjct: 177 RLGI-KRNYITLDPFTFVPAVAQGALAIQGRRKDFNRFAKIIKFLDDFNTRISTDIERRV 235 Query: 237 LAELDGSCKSAIAGF-AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQY 295 L + G C+ + K + + DG I + + D + + + Sbjct: 236 LKLIGGGCQIPFGCYVCPIKNKSFKISAFI-EKDGNIRRVLFEEDFKKDKNEVANEIYKR 294 Query: 296 I 296 + Sbjct: 295 L 295 >gi|4884830|gb|AAD31824.1|AF131199_3 porphobilinogen deaminase [Pseudomonas syringae pv. syringae FF5] Length = 144 Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats. Identities = 61/144 (42%), Positives = 86/144 (59%), Gaps = 2/144 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSD 144 L S++GTSSLRR+A LL R D Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRPD 142 >gi|153865130|ref|ZP_01997767.1| Porphobilinogen deaminase [Beggiatoa sp. SS] gi|152145375|gb|EDN72233.1| Porphobilinogen deaminase [Beggiatoa sp. SS] Length = 211 Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 112/207 (54%), Gaps = 1/207 (0%) Query: 101 LPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK 160 + RE+ D F+S+T +L L +++GTSSLRR++ LL R D+ + RG + TRL+K Sbjct: 1 MRREEPFDAFVSNTYATLAALPEGAIVGTSSLRRQSQLLAHRPDLQIRSLRGNVGTRLSK 60 Query: 161 LNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220 L+N AI+LA G+KRL + I+EI++ P+ GQGAI IE ++ + ++ + Sbjct: 61 LDNGDYDAIVLAAVGLKRLGLVERIREIIDSTIMLPAIGQGAIGIECRQDDLETRQHIDN 120 Query: 221 INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIFHEVSRN 279 +N DT D V ERA L+G C+ IAG+A + L G+V +G+ + Sbjct: 121 LNDPDTQDCVIAERALNESLEGGCQVPIAGYAEIQSSENLTMRGLVGDIEGQHILRHNLQ 180 Query: 280 GNRCDAINIGRDAAQYIRFISNKNVFN 306 G R A +G+ A+ + + Sbjct: 181 GARHLAAELGKSLAKVLLTQGAAQILE 207 >gi|257076597|ref|ZP_05570958.1| porphobilinogen deaminase [Ferroplasma acidarmanus fer1] Length = 285 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 143/289 (49%), Gaps = 12/289 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P IGTR S LAL A + +L + + I ++ GD N L + G+F Sbjct: 2 PVTIGTRNSKLALIQANSVKDALESR----GYEVNIKSYTSAGDSNKNIPLYRMSSTGVF 57 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+ ++++ GEID AVHSAKD+P+ + KGL+I+A R+D RDV IS T L+++ Sbjct: 58 VDELNERVLKGEIDLAVHSAKDIPSNIQKGLEITAVTGRDDFRDVLISRT--PLEEMTAG 115 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 SVIGTSS+RR + +I+V D RG I+TR++K K I++A A KR+K + Sbjct: 116 SVIGTSSMRRIRQAMTVNPEITVSDIRGNIDTRISKYTEKKYTGIIIAMAAYKRMKLDIE 175 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 IL+ E F P+P QG I I N+P + + IN +T+ + ER L+ C Sbjct: 176 HF-ILSEEQFLPAPNQGIIAIVGKSNSPASIISGE-INDRETYRDMKNERFIATSLNLGC 233 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKI--FHEVSRNGNRCDAINIGRD 291 + + K + L SD + + I G Sbjct: 234 SMPVGILS--KDGKIKTRFYSLDSDEHRDMVFSAENLDSVVEHIKEGIS 280 >gi|168705543|ref|ZP_02737820.1| porphobilinogen deaminase [Gemmata obscuriglobus UQM 2246] Length = 140 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 60/138 (43%), Positives = 86/138 (62%), Gaps = 2/138 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGPKVSLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ E D AVHS KD+P +GL + RED RD F+S+T SL + Sbjct: 59 KGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTFASLDE 118 Query: 121 LALHSVIGTSSLRRKALL 138 L L S++GTSSLRR+A L Sbjct: 119 LPLGSIVGTSSLRRQAQL 136 >gi|330945695|gb|EGH47153.1| porphobilinogen deaminase [Pseudomonas syringae pv. pisi str. 1704B] Length = 191 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 60/151 (39%), Positives = 86/151 (56%), Gaps = 2/151 (1%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + RI TR S LAL A ++ L H P + ++P+ ++GD++ + L++IGG Sbjct: 1 MSSREIRIATRKSALALWQAEYVKARLEQAH--PGLLVTLVPMVSRGDKLLDSPLSKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+E L+ D AVHS KD+P +GL + RED RD F+S+T SL Sbjct: 59 KGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQ 118 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFR 151 L S++GTSSLRR+A LL R + Sbjct: 119 LPAGSIVGTSSLRRQAQLLARRDASFARSQK 149 >gi|307254893|ref|ZP_07536715.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306862134|gb|EFM94106.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] Length = 174 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 52/167 (31%), Positives = 82/167 (49%) Query: 139 LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSP 198 + + V RG + TRL+KL+N + AI+LA AG+ RL + I+ +++E P+ Sbjct: 1 MAKYPHLEVKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMPERIRSFISVEQSLPAA 60 Query: 199 GQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST 258 GQGA+ IET V++ + + +NH T V ERA L G C+ I GFA G+ Sbjct: 61 GQGAVGIETRVDDERVLNYLATLNHNPTACCVIAERAMNTRLQGGCQVPIGGFATLNGNE 120 Query: 259 LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + +V A DG S +R +A +G A+ + + Sbjct: 121 ITLNALVGALDGSNIIRASGVADRENAEQLGISVAEQLLAQGADKIL 167 >gi|87886445|dbj|BAE79637.1| porphobilinogen deaminase [Danio rerio] Length = 203 Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats. Identities = 65/163 (39%), Positives = 88/163 (53%), Gaps = 5/163 (3%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + R+GTR S LA L +++ P I+ +ST GD+I + L++IG K L Sbjct: 18 RVIRVGTRKSQLARIQTDSVVEKLKELY--PDVLFEIVAMSTTGDKILDTALSKIGEKSL 75 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKD 120 FT+E+E L E+D VHS KD+PT L G I A L RE+ D + H + L Sbjct: 76 FTKELENALEKNEVDLVVHSLKDLPTVLPGGFTIGAVLKRENPHDAVVLHPKNKGKRLDS 135 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN 163 L+ SVIGTSSLRR A L + + D RG + TRL KL+ Sbjct: 136 LSNKSVIGTSSLRRAAQLKKRXXHLEFKDIRGNLNTRLKKLDE 178 >gi|296131260|ref|YP_003638510.1| porphobilinogen deaminase [Cellulomonas flavigena DSM 20109] gi|296023075|gb|ADG76311.1| porphobilinogen deaminase [Cellulomonas flavigena DSM 20109] Length = 342 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 91/340 (26%), Positives = 140/340 (41%), Gaps = 41/340 (12%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M ++ RIGTR S LAL + + + + + T+GDR+ +L +GG Sbjct: 1 MPQQ-VRIGTRASALALTQTGHVA---DALADLADLAVETVRVRTQGDRVR-ASLASLGG 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G+F + L+ G D AVHS KD+PT GL ++A PR D RD + +L Sbjct: 56 TGVFVTALRDALLDGRCDVAVHSLKDLPTGPADGLVVAAVPPRADARDALCARDGLTLAT 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN------------------ 162 L + IGT S RR A L R D+ V+D RG + TRL ++ Sbjct: 116 LPAGARIGTGSPRRAAQLRALRPDVDVVDIRGNVGTRLGRVRGLDATTVATGSQVGPDAP 175 Query: 163 ---------NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 A++LA AG+ RL + + E + P+PGQGA+ +E + Sbjct: 176 HPGVATDAPRGDLDAVVLAAAGLGRLGRLDAVTEWFAPDVLAPAPGQGALAVEVRTADAA 235 Query: 214 AQELVKV----INHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG--STLYFYGIVLA 267 A + ++ T +V ERA LA L+ C + + + L +V A Sbjct: 236 ADTPLAHALRALDDPPTRRAVVAERAVLARLEAGCAAPVGAWGRVDDATGALALDAVVAA 295 Query: 268 SDGKIFHE---VSRNGNRCDAINIGRDAAQYIRFISNKNV 304 DG + A +GR A+ + + Sbjct: 296 VDGSRVLRLAARGAADDDAAADALGRQLAEDLLAAGADRL 335 >gi|297180547|gb|ADI16759.1| porphobilinogen deaminase [uncultured gamma proteobacterium HF0010_11B23] Length = 292 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 80/252 (31%), Positives = 126/252 (50%), Gaps = 10/252 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI TR S LAL + ++K N I T+GDR + + K F Sbjct: 1 MRIATRSSKLALKQVDIFKD----LYKTQEINFEIKTQITEGDRKSKKGENLF-DKAHFV 55 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 E++E L++ + D A+HS KDM +GL+I A + + DV + +L DLA + Sbjct: 56 EDLESSLLNYDADIAIHSLKDMSCHDTEGLEIYAAIEHQSRSDVMVYKDQINLNDLA-NI 114 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGTSSLRR + + + + RG I+TRL KL+ +K AI+LA AGI+RL Sbjct: 115 KIGTSSLRRTRQCKHFLKNNNCSEIRGNIDTRLLKLHEDKFDAIILAKAGIERLGLNVNF 174 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 ++ DF P+ GQG I ++ ++ K + L+ I + + + ER + L+ +C Sbjct: 175 IDL----DFLPAIGQGIIAVQCRSDDKKTKTLLDQIKNFELLQMIEIERRIVRNLNATCN 230 Query: 246 SAIAGFAYCKGS 257 SA++ + G Sbjct: 231 SALSIRSKIDGD 242 >gi|3172397|gb|AAC18581.1| porphobilinogen deaminase [Brevibacillus brevis] Length = 151 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 64/151 (42%), Positives = 89/151 (58%), Gaps = 2/151 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +++GTR S LAL L P + + + TKGDRI + TL+++GGKGLF Sbjct: 3 KWKVGTRRSKLALTQTNWVVDKLK--GFAPEADFELHEIVTKGDRILDVTLSKVGGKGLF 60 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +EIE+ L E D AVHS KDMP +L +GL I A R D RDV +S ++L +L Sbjct: 61 VKEIEQSLFDKETDFAVHSLKDMPAELPEGLVIGAIPKRVDPRDVLLSKDGKTLDELPQG 120 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIE 155 +++GTS+LRR A +L R DI + RG I+ Sbjct: 121 ALVGTSTLRRSAQILAHRPDIQIESLRGNID 151 >gi|294653592|ref|NP_714555.2| porphobilinogen deaminase [Leptospira interrogans serovar Lai str. 56601] gi|293630693|gb|AAN51570.2| porphobilinogen deaminase [Leptospira interrogans serovar Lai str. 56601] Length = 542 Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats. Identities = 67/282 (23%), Positives = 114/282 (40%), Gaps = 35/282 (12%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +IG+R S LA + +L K P + + GD+ L ++G Sbjct: 1 MS-RILKIGSRKSALAKLQTYLVLGALKK--KFPEIQVELFFREASGDQDLQTPLWKMGT 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG+FT+++ L+ ++D +HS KD+ + I L R D RDV + + K Sbjct: 58 KGVFTQDLTADLVEKKVDIVIHSWKDLDLEGHPDTTIIGVLDRADQRDVLLWKKSSLSKY 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDF----------RGKIETRLNKLNNNKAHAIL 170 I TSS RR+ L ++ S + RG I+TR+ K + + ++ Sbjct: 118 SPSVLKIHTSSPRREYNLRKFLSFSLPSRYTNSSLVFLPIRGNIQTRIRKWKESDSDGLV 177 Query: 171 LAYAGIKRL----------------------KKEKVIKEILNIEDFPPSPGQGAICIETH 208 LA A + RL ++ + +I + P +PGQGAI E Sbjct: 178 LAKAALDRLLSEDFFNSDELEYQEIRKFLKDSMDESVYQIFPLSLNPTAPGQGAIAAEVR 237 Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250 + + ++ ++ + +V ER L G C I Sbjct: 238 TEDNWVLDRIRTLSKSEVVLAVEEERKILKRFGGGCHQKIGV 279 >gi|45655592|ref|YP_003401.1| porphobilinogen deaminase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45602563|gb|AAS72038.1| porphobilinogen deaminase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 547 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 113/279 (40%), Gaps = 34/279 (12%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +IG+R S LA + +L K P + + GD+ L ++G KG+ Sbjct: 8 RILKIGSRKSALAKLQTYLVLGALKK--KFPEIQVELFFREASGDQDLQTPLWKMGTKGV 65 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+++ L+ ++D +HS KD+ + I L R D RDV + + K Sbjct: 66 FTQDLTADLVEKKVDIVIHSWKDLDLEGHPDTTIIGVLDRADQRDVLLWKKSSLSKYSPS 125 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDF----------RGKIETRLNKLNNNKAHAILLAY 173 I TSS RR+ L ++ S + RG I+TR+ K + + ++LA Sbjct: 126 VLKIHTSSPRREYNLRKFLSFSLPSRYTNSSLVFLPIRGNIQTRIRKWKESDSDGLVLAK 185 Query: 174 AGIKRL----------------------KKEKVIKEILNIEDFPPSPGQGAICIETHVNN 211 A + RL ++ + +I + P +PGQGAI E + Sbjct: 186 AALDRLLSEDFFNSDELEYQEIRKFLKDSMDESVYQIFPLSLNPTAPGQGAIAAEVRTED 245 Query: 212 PKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG 250 + ++ ++ + +V ER L G C I Sbjct: 246 NWVLDRIRTLSKSEVVLAVEEERKILKRFGGGCHQKIGV 284 >gi|28202885|gb|AAO35329.1| porphobilinogen deaminase [Clostridium tetani E88] Length = 218 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 75/220 (34%), Positives = 111/220 (50%), Gaps = 3/220 (1%) Query: 79 CAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALL 138 AVHS KD+P ++ I A RED+RD F+S +L S IGTSS RR + + Sbjct: 1 MAVHSMKDVPYEVPSMFYIGAIPRREDVRDAFVSRDGTKFMELPSGSKIGTSSRRRSSQI 60 Query: 139 LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSP 198 R D+ V+ RG ++TRL K+ +LA AG+KRL E+VI + + E+ P+ Sbjct: 61 KILRPDVEVVPIRGNVQTRLRKIEEMNLAGTILAVAGLKRLNMEEVITDYFSPEEMVPAI 120 Query: 199 GQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST 258 GQGA+ IE + +K I+HE+T V ER+F+ L G C S I A + Sbjct: 121 GQGALGIEIKKYED-VIDYIKGIDHEETRICVEGERSFMEALKGDCHSTIGAHAIVENDL 179 Query: 259 LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +Y G + +GK + G + + +G+ A I Sbjct: 180 MYMTG-IFEVNGK-IVKKDIEGKKENYKQLGKTLADRIMK 217 >gi|217073904|gb|ACJ85312.1| unknown [Medicago truncatula] Length = 243 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 79/154 (51%), Positives = 103/154 (66%), Gaps = 3/154 (1%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHN--IVIIPLSTKGDRITNRTLTEIGGKGL 63 RIGTR SPLALA A ETR L+ H I I+ + T GD+I ++ L +IGGKGL Sbjct: 62 IRIGTRGSPLALAQAHETRDKLIASHTELAEEGAIQIVIIKTTGDKILSQPLADIGGKGL 121 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT+EI++ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A SL DL Sbjct: 122 FTKEIDEALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSAASLADLPA 181 Query: 124 HSVIGTSSLRRKALL-LRWRSDISVIDFRGKIET 156 SVIGT+SLRRK+ + R+ S +FRG ++T Sbjct: 182 GSVIGTASLRRKSQILHRYPSLSVQDNFRGNVQT 215 >gi|116329566|ref|YP_799285.1| bifunctional porphobilinogen deaminase/uroporphyrinogen synthase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116122459|gb|ABJ80352.1| Bifunctional porphobilinogen deaminase/uroporphyrinogen synthase [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 542 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 78/315 (24%), Positives = 128/315 (40%), Gaps = 40/315 (12%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +I +R S LA + +L K P I + GD L ++G Sbjct: 1 MS-RVLKIASRKSALAKLQTYLVLDALKK--KFPNIQIELHFREASGDLDLQTPLWKMGT 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 +G+FT+++ K L+ ++D +HS KD+ + G I L R D RDV + + K+ Sbjct: 58 RGVFTQDLTKDLVEKKVDLVIHSWKDLDLEGHSGTTIVGVLDRADQRDVLLWKKSSLSKN 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDF----------RGKIETRLNKLNNNKAHAIL 170 I TSS RR+ L ++ ++ + RG I+TR+ K N+ + ++ Sbjct: 118 FPSELKIQTSSPRREYNLKKFLNNSLPSRYKNSSLIFLPVRGNIQTRIRKWRNSDSDGLV 177 Query: 171 LAYAGIKRLKKEKV----------------------IKEILNIEDFPPSPGQGAICIETH 208 LA A + RL E I ++L + P +P QGAI E Sbjct: 178 LAKAALDRLLSEDFLNSNELEYQEIRKFLKEILEESIFQVLPLSLSPSAPAQGAIAAEVR 237 Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK--GSTLYFYGIVL 266 ++ A V+ ++ + +V ER L G C I K G LY G+ Sbjct: 238 TDDEWALGFVRALSKPEVVSAVEEERNTLKRFGGGCHQKIGVSVLYKSYGKILYQKGL-- 295 Query: 267 ASDGKIFHEVSRNGN 281 +D E+ + Sbjct: 296 -TDSGEILEIEEQFS 309 >gi|170044628|ref|XP_001849943.1| porphobilinogen deaminase [Culex quinquefasciatus] gi|167867697|gb|EDS31080.1| porphobilinogen deaminase [Culex quinquefasciatus] Length = 474 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 77/240 (32%), Positives = 118/240 (49%), Gaps = 31/240 (12%) Query: 13 SPLALAHAFETRSSLMDVHKIPPHNIVII------------------------PLSTKGD 48 S LAL S L ++ P I ++T GD Sbjct: 167 SKLALIQTKYVISCLQKLN--PDVVYEIRKYFQHVHLCWHVPSYLLAFFLSPDTMTTVGD 224 Query: 49 RITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRD 108 R+ N++L +IG K LFT+++E L +G +D VHS KD+PT L G+ I A L R+D RD Sbjct: 225 RVLNKSLPKIGEKSLFTKDLEDALRTGGVDFVVHSLKDLPTALPLGMAIGAVLERDDPRD 284 Query: 109 VFISHTAQSLK---DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN- 164 + + A + L SV+GTSSLRR A L R ++ V D RG + TRL KL+ + Sbjct: 285 ALVLNEAHRGRTLSTLPKGSVVGTSSLRRSAQLARKYENVVVCDIRGNLNTRLAKLDADG 344 Query: 165 -KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223 K I+LA AG+ R+ + +++ + + GQGA+ +E N+ +++ + H Sbjct: 345 SKFAGIILAQAGLVRMGWNARVSQVIEPGEILYAVGQGALAVECRSNDEYILDMLSKLCH 404 >gi|116332455|ref|YP_802172.1| bifunctional porphobilinogen deaminase/uroporphyrinogen synthase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116127322|gb|ABJ77414.1| Bifunctional porphobilinogen deaminase/uroporphyrinogen synthase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 542 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 78/315 (24%), Positives = 128/315 (40%), Gaps = 40/315 (12%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +I +R S LA + +L K P I + GD L ++G Sbjct: 1 MS-RVLKIASRKSALAKLQTYLVLDALKK--KFPNIQIELHFREASGDLDLQTPLWKMGT 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 +G+FT+++ K L+ ++D +HS KD+ + G I L R D RDV + + K+ Sbjct: 58 RGVFTQDLTKDLVEKKVDLVIHSWKDLDLEGHSGTTIVGVLDRADQRDVLLWKKSSLSKN 117 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDF----------RGKIETRLNKLNNNKAHAIL 170 I TSS RR+ L ++ ++ + RG I+TR+ K N+ + ++ Sbjct: 118 FPSELKIQTSSPRREYNLKKFLNNSLPSRYKNSSLIFLPVRGNIQTRIRKWGNSDSDGLV 177 Query: 171 LAYAGIKRLKKEKV----------------------IKEILNIEDFPPSPGQGAICIETH 208 LA A + RL E I ++L + P +P QGAI E Sbjct: 178 LAKAALDRLLSEDFLNSNELEYQEIRKFLKEILEESIFQVLPLSLSPSAPAQGAIAAEVR 237 Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK--GSTLYFYGIVL 266 ++ A V+ ++ + +V ER L G C I K G LY G+ Sbjct: 238 TDDEWALSFVRALSKPEVVSAVEEERNTLKRFGGGCHQKIGVSVLYKSYGKILYQKGL-- 295 Query: 267 ASDGKIFHEVSRNGN 281 +D E+ + Sbjct: 296 -TDSGEILEIEEQFS 309 >gi|183220566|ref|YP_001838562.1| porphobilinogen deaminase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910676|ref|YP_001962231.1| bifunctional porphobilinogen deaminase/uroporphyrinogen synthase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775352|gb|ABZ93653.1| Bifunctional porphobilinogen deaminase/uroporphyrinogen synthase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778988|gb|ABZ97286.1| Porphobilinogen deaminase (PBG; Hydroxymethylbilane synthase) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 511 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 79/317 (24%), Positives = 135/317 (42%), Gaps = 40/317 (12%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + +IG R S L+ ++L + +K N I + GD+ L + GG Sbjct: 1 MSE-TIKIGGRSSLLSRIQIHTVTNALKEKNK--DLNFETIFRESSGDKDLTTPLWQFGG 57 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 +G+FT+++++ L++ ++D +HS KDM K K + LPRED+RDV + + + Sbjct: 58 QGIFTKDLQEDLLNHKVDIVIHSYKDMDLKERKETTLIPVLPREDVRDVLLFKKNKW-IN 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDF----------RGKIETRLNKLNNNKAHAIL 170 L I TSS RR+ + + + RG I+TRL K ++++ IL Sbjct: 117 LPNEITILTSSPRREYHIKEFLRNYFPTPINNFEIKIESVRGNIQTRLRKYLDHESGGIL 176 Query: 171 LAYAGIKRLKKEKVIKE----------------------ILNIEDFPPSPGQGAICIETH 208 +A A + R+ + + +L FP +P QGA+C E Sbjct: 177 VAKAALDRILNFQDPDQLLPELKEIQQLIKDTMNVSLFMVLPSSIFPSAPAQGALCAEIR 236 Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK--GSTLYFYGIVL 266 + + L+ I+ +T + N ER L+ G C I + G + GI Sbjct: 237 KEDKHLETLLSKISDSETNLTTNEEREILSRYGGGCHQKIGVTVLHREYGKVCFIRGI-- 294 Query: 267 ASDGKIFHEVSRNGNRC 283 DG+I + + Sbjct: 295 TEDGQILQTKELSESPN 311 >gi|56752693|gb|AAW24560.1| SJCHGC02909 protein [Schistosoma japonicum] Length = 268 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 72/264 (27%), Positives = 112/264 (42%), Gaps = 21/264 (7%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + R+G+R S LAL S L P ++ ++T GD I + L++IG K Sbjct: 6 SQHAVRVGSRRSNLALLQTEMAISLLKVQK--PHIMFEVVEIATVGDEILDVPLSKIGDK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119 LFT+E+EK L+ GE+D VHS KD+P+ L GL + R DV + Sbjct: 64 SLFTKELEKSLLVGEVDLVVHSLKDVPSVLPTGLVLGCVFGRSSPEDVVLMAPHNRGMKL 123 Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-------------- 164 DL + + +GTSS+RR A L+R + I RG + TRL KL+ Sbjct: 124 SDLPVGATVGTSSIRRVATLIRKYPHLKFISIRGNLNTRLAKLDTPSNLQKQCCTGNQSL 183 Query: 165 KAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224 A++LA AG++R+ I ++ + D + QGA+ + + Sbjct: 184 SYDALILAKAGVERMGWVDRIDQV--LSDSFYAVSQGALAANVFKTILLSWIYYHLFMTS 241 Query: 225 DTWDSVNCERAFLAELDGSCKSAI 248 A S++ Sbjct: 242 RVVCLNGYRPAQFGLYSSEISSSV 265 >gi|307826231|ref|ZP_07656440.1| Porphobilinogen deaminase [Methylobacter tundripaludum SV96] gi|307732693|gb|EFO03561.1| Porphobilinogen deaminase [Methylobacter tundripaludum SV96] Length = 155 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 51/150 (34%), Positives = 82/150 (54%) Query: 156 TRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215 TRL+KL++ + AI+LA AG+KRL + I + L+ P+ GQGAI IE +++P+ Sbjct: 1 TRLSKLDSGEYDAIILASAGLKRLGMAERITQCLDTSVSLPAIGQGAIGIECRIDDPEIN 60 Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275 E++ ++ +T V ERA A L G C+ IAGFA +G L+ G+V + DG + + Sbjct: 61 EMLSALHDSETGLCVAAERAMNARLSGGCQVPIAGFATMQGEQLFMRGLVGSPDGSVIYR 120 Query: 276 VSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 R + A IG+ A+ + + Sbjct: 121 AERTDSVDSAEAIGKMIAEDLLAQGADEIL 150 >gi|213616301|ref|ZP_03372127.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 168 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 69/164 (42%), Positives = 96/164 (58%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 P + ++P+ T+GD I + L ++GGKGLF +E+E L+ D AVHS KD+P Sbjct: 5 PGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVHSMKDVPVAFPD 64 Query: 94 GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGK 153 GL + RED RD F+S+ SL DL S++GTSSLRR+ L R D+ + RG Sbjct: 65 GLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGN 124 Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPS 197 + TRL KL+N AI+LA AG+KRL E I+ L + P+ Sbjct: 125 VGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTALPPDVSLPA 168 >gi|225016972|ref|ZP_03706164.1| hypothetical protein CLOSTMETH_00887 [Clostridium methylpentosum DSM 5476] gi|224950286|gb|EEG31495.1| hypothetical protein CLOSTMETH_00887 [Clostridium methylpentosum DSM 5476] Length = 292 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 109/296 (36%), Gaps = 16/296 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + IG + L+ A L H P ++P+ G Sbjct: 11 KMEKIHIGCAQNELSRNFADHLAQCLHSYH--PELTAELVPIKNTG---------ADEEP 59 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 L +E+ LI +D AV+ A D+P +L L I A RED+RD + + D Sbjct: 60 TLVARRLEQALIDCRVDLAVYHALDLPLELHPELPIVAISSREDVRDALVFPQGKQQPDF 119 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKK 181 IG +S R++ L R D G + +L +L+ + A++L A + Sbjct: 120 --SKPIGCTSRRQQVQLHRVFPDCITAPVGGTVAEQLARLDQGEYGALVLPAAQLGWFGL 177 Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 ++ + ++ +E+ P+ G AI ++ H A Sbjct: 178 QQRVGQLFCVEELVPAAGHAAIAVQAREEFDAGLLE---CFHSWDSWDAVFCEREFARAL 234 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 IA A KG TL G I+ S +G+R DA +G + A ++ Sbjct: 235 EEEPGPIAVHAEVKGETLSVVGFYADEAEGIYRMSSMSGDRKDAGRLGFELAAELK 290 >gi|167835847|ref|ZP_02462730.1| porphobilinogen deaminase [Burkholderia thailandensis MSMB43] Length = 159 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 61/149 (40%), Positives = 91/149 (61%), Gaps = 2/149 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAG 130 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGK 153 +V+GTSSLRR+A+L + V RG Sbjct: 131 AVVGTSSLRREAMLRARHPRLDVRPLRGN 159 >gi|297180918|gb|ADI17122.1| porphobilinogen deaminase [uncultured gamma proteobacterium HF0070_03O15] Length = 297 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 84/309 (27%), Positives = 127/309 (41%), Gaps = 23/309 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +I TR S LAL + +S + P II + T+GD+ + K F Sbjct: 1 MKIATRSSKLALEQTYFFQSWI------PKQPTKIIEIKTEGDKKSAMGEVLF-DKANFV 53 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +IE+ LI D A+HSAKDMP K L + PR D+ I Sbjct: 54 SDIEECLIKDGADVAIHSAKDMPAFKHKELDHYFFGPR-SRSDLLIFRKDIDPV-FKKDM 111 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRRK + +V+ G ++TR+NKLN+ I+LA AG +RLK + Sbjct: 112 KLGTSSLRRKMQAKFYLGAKNVVPISGNVDTRINKLNSGDYDCIILAEAGCQRLKIDFED 171 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQ----ELVKVINHEDTWDSVNCERAFLAELD 241 + + GQG + ++ +N A+ E + D E+ L ++ Sbjct: 172 LNYIELG-HLTCAGQGVLAVQYKRDNKFAKEFLLEWKQNFLQRVIHDETEMEKRLLEKIG 230 Query: 242 GSCKSAIAGFAYCKG----STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 SC SAIA A +G + G V + +S G D DA ++ Sbjct: 231 ASCNSAIAVRANHEGPKGVDKI-IKGEVYGLN----EYISFEGKSSDVDTAINDAIDMLQ 285 Query: 298 FISNKNVFN 306 + + N Sbjct: 286 NKNGLELLN 294 >gi|47779350|gb|AAT38579.1| predicted porphobilinogen deaminase [uncultured gamma proteobacterium eBACHOT4E07] Length = 286 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 80/298 (26%), Positives = 127/298 (42%), Gaps = 18/298 (6%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +I TR S LALA E S + II + T+GD +++ T K F Sbjct: 2 TLKIATRSSKLALAQVDEFVSE------YNISDYKIIKIKTEGDVKSSKGETLF-DKAHF 54 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +I+K ++ G+ D AVHSAKD P K G++ + + R +DV I + Sbjct: 55 VTDIQKSILRGDADIAVHSAKDTPAKKTNGIERNFIISRTS-KDVLIFKDNN---NFNSS 110 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +GTSSLRRK + +V D G ++TRL KL I+LA AG + + Sbjct: 111 MKLGTSSLRRKLQAFHFLKSTNVFDINGNVDTRLEKLYRGDYDCIILAKAG--LERLRLL 168 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQ---ELVKVINHEDTWDSVNCERAFLAELD 241 + D+ + GQG + +E + + + E+ I ++ + + ER L +D Sbjct: 169 KELNYEEMDWITASGQGTLAVEMTESYHENEKLLEIHSNIKNKLATNGIEYERNILERVD 228 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 C SAIA + + S G + K F S + +I R + + Sbjct: 229 AGCNSAIAIESISENSKQIIRGEIYGV--KEFITFSGASDIEAIEDIERQNGRRLLNE 284 >gi|297622583|ref|YP_003704017.1| Hydroxymethylbilane synthase [Truepera radiovictrix DSM 17093] gi|297163763|gb|ADI13474.1| Hydroxymethylbilane synthase [Truepera radiovictrix DSM 17093] Length = 284 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 73/285 (25%), Positives = 124/285 (43%), Gaps = 20/285 (7%) Query: 16 ALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISG 75 ALA A + L + P +I L ++G +E+ L G Sbjct: 14 ALAQARAVLAELSE--GWPDVSISQRTLQSRG----------------GADELLHALQGG 55 Query: 76 EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRK 135 I AV S +P L GL ++A R + R ++ A+SL DL + +G +LR + Sbjct: 56 RIHIAVQSLDTLPLTLPDGLSVAAVTKRLEPRSALLARGAKSLGDLPKGAEVGVPTLRDR 115 Query: 136 ALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFP 195 A +L R D+ V F G++E L L+ + A++ A +L + + + +L + P Sbjct: 116 AFVLAARRDLKVRVFTGELEDALALLSAQELGALVWPSAPFIQLGQRERVTTLLEPQQLP 175 Query: 196 PSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK 255 P+PGQGA+ + ++ A +L + H ++D ERAF ++ S I FA Sbjct: 176 PAPGQGALALVVRDDDDLASDLAYTLQHRPSFDRACAERAFARQMSSSAHH-IGAFASVT 234 Query: 256 -GSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 L+ G +G + G+ +A +GR+ AQ + Sbjct: 235 ADGELHLLGAAARDEGDWMIQAEVTGDAAEAEELGRELAQDVLEQ 279 >gi|297181506|gb|ADI17693.1| porphobilinogen deaminase [uncultured gamma proteobacterium HF0130_23I23] Length = 297 Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats. Identities = 83/309 (26%), Positives = 127/309 (41%), Gaps = 23/309 (7%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +I TR S LAL + +S + P II + T+GD+ + K F Sbjct: 1 MKIATRSSKLALEQTYFFQSWI------PKQPTKIIEIKTEGDKKSAMGEVLF-DKANFV 53 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +IE+ LI D A+HSAKDMP K L + PR D+ I Sbjct: 54 SDIEECLIKDGADVAIHSAKDMPAFKHKELDHYFFGPR-SRSDLLIFRKDIDPV-FKKDM 111 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 +GTSSLRRK + +V+ G ++TR+NKLN+ I+LA AG +RLK + Sbjct: 112 KLGTSSLRRKMQAKFYLGAKNVVPISGNVDTRINKLNSGDYDCIILAEAGCQRLKIDFED 171 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQ----ELVKVINHEDTWDSVNCERAFLAELD 241 + + GQG + ++ +N A+ E + D E+ L ++ Sbjct: 172 LNYIELG-HLTCAGQGVLAVQYKRDNKFAKEFLLEWKQNFLQRVIHDETEMEKRLLEKIG 230 Query: 242 GSCKSAIAGFAYCKG----STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 SC SAIA A +G + G + + +S G D DA ++ Sbjct: 231 ASCNSAIAVRANHEGPKGVDKI-IKGEIYGLN----EYISFEGKSSDVDTAINDAIDMLQ 285 Query: 298 FISNKNVFN 306 + + N Sbjct: 286 NKNGLELLN 294 >gi|29841142|gb|AAP06155.1| similar to GenBank Accession Number P19356 hydroxymethylbilane synthase (hemC) in Rattus sp [Schistosoma japonicum] Length = 277 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 98/203 (48%), Gaps = 19/203 (9%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + R+G+R S LAL S L P ++ ++T GD I + L++IG K Sbjct: 6 SQHAVRVGSRRSNLALLQTEMAISLLKVQK--PHIMFEVVEIATVGDEILDVPLSKIGDK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK-- 119 LFT+E+EK L+ GE+D VHS KD+P+ L GL + R DV + Sbjct: 64 SLFTKELEKSLLVGEVDLVVHSLKDVPSVLPTGLVLGCVFGRSSPEDVVLMAPHNRGMKL 123 Query: 120 -DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNN-------------- 164 DL + + +GTSS+RR A L+R + I RG + TRL KL+ Sbjct: 124 SDLPVGATVGTSSIRRVATLIRKYPHLKFISIRGNLNTRLAKLDTPSNLQKQCCTGNQSL 183 Query: 165 KAHAILLAYAGIKRLKKEKVIKE 187 A++LA AG++R+ I + Sbjct: 184 SYDALILAKAGVERMGWVDRIDQ 206 >gi|218677853|ref|ZP_03525750.1| porphobilinogen deaminase [Rhizobium etli CIAT 894] Length = 123 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 79/123 (64%), Positives = 92/123 (74%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M+ KPFRIGTR SPLALA A E R LM H +P I+ L+TKGDRIT+R+L+EIGG Sbjct: 1 MQTKPFRIGTRGSPLALAQAHEARDRLMAAHHLPEEMFEIVVLTTKGDRITDRSLSEIGG 60 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLFTEE+E+KL +GE+D AVHSAKDMPT L GL +SAYLPREDIRD + TA L D Sbjct: 61 KGLFTEELEQKLAAGELDFAVHSAKDMPTNLPDGLHLSAYLPREDIRDAVVGRTAPKLID 120 Query: 121 LAL 123 L Sbjct: 121 LPH 123 >gi|260890848|ref|ZP_05902111.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Leptotrichia hofstadii F0254] gi|260859401|gb|EEX73901.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Leptotrichia hofstadii F0254] Length = 193 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 71/192 (36%), Positives = 98/192 (51%), Gaps = 20/192 (10%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVH----------------KIPPHNIVIIPLS 44 M+ IGTR S LALA A + + L+ + K I + + Sbjct: 1 MKSNKIIIGTRGSILALAQAEKVKEMLIKKYDELRENESFCEIEGFEKKNSLEIELKVIV 60 Query: 45 TKGDRITNRTLTEIGG---KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYL 101 TKGD+ R T+I G K LF +EIEK+++ +ID AVHS KDMP +GL + + Sbjct: 61 TKGDKDL-RDFTKIKGTTQKDLFVKEIEKEMLENKIDLAVHSLKDMPQNTPEGLLNACFP 119 Query: 102 PREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 RED RDV +S + LK+L +SVIGT S+RR+ LL R+D+ + RG I TRL KL Sbjct: 120 MREDNRDVLVSKNGKKLKELDENSVIGTGSIRREKELLNLRNDVKIKAIRGNIHTRLKKL 179 Query: 162 NNNKAHAILLAY 173 + Sbjct: 180 MMGNMMRLCWLR 191 >gi|317471679|ref|ZP_07931020.1| porphobilinogen deaminase [Anaerostipes sp. 3_2_56FAA] gi|316900783|gb|EFV22756.1| porphobilinogen deaminase [Anaerostipes sp. 3_2_56FAA] Length = 139 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 55/143 (38%), Positives = 80/143 (55%), Gaps = 4/143 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 ME K RIG+R S LA+A L + P + ++ L T GD+I N+TL +IGG Sbjct: 1 MEPKRLRIGSRESLLAVAQTRLVIEQLKANY--PELSFELVTLKTTGDKILNKTLDKIGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KGLF +E+++ L+ G ID AVHS KD+P ++ L ++A R D RDV + ++ ++ Sbjct: 59 KGLFVKELDQALLDGRIDMAVHSMKDLPMEISDDLPVAAVPKRGDPRDVLVLPSSGDFEE 118 Query: 121 LALHSVIGTSSLRRKALLLRWRS 143 VIG+SS RR R Sbjct: 119 --FGQVIGSSSARRVLQARRLFP 139 >gi|15791132|ref|NP_280956.1| porphobilinogen deaminase [Halobacterium sp. NRC-1] gi|169236887|ref|YP_001690087.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Halobacterium salinarum R1] gi|25453030|sp|Q9HMY5|HEM3_HALSA RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|10581740|gb|AAG20436.1| porphobilinogen deaminase [Halobacterium sp. NRC-1] gi|167727953|emb|CAP14741.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Halobacterium salinarum R1] Length = 396 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 57/161 (35%), Positives = 95/161 (59%), Gaps = 4/161 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + R+ TR S LAL A E +L D H++ ++ + T+GDR+T+ ++++G Sbjct: 1 MSSQQIRLATRGSDLALRQAGEVVDTLEDRR----HDVELVEVETEGDRVTDALISDLGK 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G F ++++++ G +D AVHS KD+PT++ + L ++A RE+ DV ++ L+D Sbjct: 57 TGAFVRALDQEVMEGTVDAAVHSMKDVPTEVPEDLVVAAVPHRENPADVLVTPDGTDLED 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 L SV+GT+SLRR A + R + V RG + TR+ KL Sbjct: 117 LPAGSVVGTASLRRGAQVQAHRPGLDVEPIRGNVGTRVEKL 157 Score = 88.3 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 1/143 (0%) Query: 165 KAHAILLAYAGIKRLKK-EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223 + A+++A G++R V E L+ P+ GQGA+C+ ++ L + H Sbjct: 248 EYDALVMARVGLERTGLLHHVGIEELSTGTHVPATGQGALCVTARRDSDVVDTLRDALEH 307 Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283 T V ER L EL G C + I A +G T+ V + DG +R + Sbjct: 308 VRTRVEVTAERVVLEELGGGCIAPIGVHALVQGDTIRTAVQVFSQDGSEQVGETRELDAE 367 Query: 284 DAINIGRDAAQYIRFISNKNVFN 306 R+ A +R ++ Sbjct: 368 QYATDARELAADLRDRGAADLIE 390 >gi|71005230|ref|XP_757281.1| hypothetical protein UM01134.1 [Ustilago maydis 521] gi|46096460|gb|EAK81693.1| hypothetical protein UM01134.1 [Ustilago maydis 521] Length = 770 Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats. Identities = 88/271 (32%), Positives = 123/271 (45%), Gaps = 35/271 (12%) Query: 35 PHNIVIIPLSTKGDRITNRTLTEIGG--KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLL 92 PH I +ST GD+ L IGG K ++T+E+E L G +D VH KD+PT L Sbjct: 248 PHAFPITSMSTAGDQNLRSPLYVIGGEGKAIWTKELEVALEQGAVDAIVHCLKDVPTALP 307 Query: 93 KGLQISAYLPREDIRDVFISH---TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVID 149 +GL+++A L RED RD + + L +L + SVIGTSS+RR A L R + D Sbjct: 308 QGLELAAVLEREDPRDALVVKAGLPYKVLDELPVGSVIGTSSVRRVAQLRRRYPHLVFSD 367 Query: 150 FRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIE- 206 RG I TRL KL+ N A++LA AG+ RL I L+ S GQG++ IE Sbjct: 368 VRGNINTRLAKLDAPNGPYTALILAAAGLVRLNMHARITAFLSSPVLLHSVGQGSLAIEV 427 Query: 207 ---------THVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGS 257 T + + +EL++ I ER+ L EL+G C + Sbjct: 428 RTPPEGADPTTNRDARIRELIRSIGDWRATFRAEAERSLLKELEGGCSIPVGVETRFDD- 486 Query: 258 TLYFYGIVLASDGKIFHEVSRNGNRCDAINI 288 G R +AI + Sbjct: 487 -----------------HDQVEGQRSEAIAL 500 Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 4/56 (7%) Query: 255 KGSTLYFYGIVLASDGKIFHEVSRNGN---RCDAINIGRDAAQYI-RFISNKNVFN 306 +G TL+ IV++ DG S + + DA +G A + + + Sbjct: 600 EGRTLHLDAIVVSLDGSQESRYSASKHCTTVKDARELGIHVAHELAHKKGARAILE 655 Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 6/28 (21%), Positives = 10/28 (35%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHK 32 + +R S LAL + + L Sbjct: 147 TLVLASRNSQLALVQSSHVSAMLEARFG 174 >gi|290770684|emb|CAY79080.2| Hem3p [Saccharomyces cerevisiae EC1118] Length = 239 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 11/231 (4%) Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGTSSLRRKALLLRWRS 143 MPT L +G ++ R D D + +SL DL ++GTSS+RR A L R Sbjct: 1 MPTLLPEGFELGGITKRVDPTDCLVMPFYSAYKSLDDLPDGGIVGTSSVRRSAQLKRKYP 60 Query: 144 DISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQG 201 + RG I+TRL KL++ + I+LA AG+ R+ E I + + + + GQG Sbjct: 61 HLKFESVRGNIQTRLQKLDDPKSPYQCIILASAGLMRMGLENRITQRFHSDTMYHAVGQG 120 Query: 202 AICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST--L 259 A+ IE + K +++ I + ERA + L+G C I + T L Sbjct: 121 ALGIEIRKGDTKMMKILDEICDLNATICCLSERALMRTLEGGCSVPIGVESKYNEETKKL 180 Query: 260 YFYGIVLASDGKIFHEVSRNGNR----CDAINIGRDAAQYIRFISNKNVFN 306 IV+ +G E D++ G+ A+ + K + + Sbjct: 181 LLKAIVIDVEGTEAVEDEIEMLIENVKEDSMACGKILAERMIADGAKKILD 231 >gi|89898473|ref|YP_515583.1| porphobilinogen deaminase [Chlamydophila felis Fe/C-56] gi|89331845|dbj|BAE81438.1| porphobilinogen deaminase [Chlamydophila felis Fe/C-56] Length = 243 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 66/234 (28%), Positives = 102/234 (43%), Gaps = 11/234 (4%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++P RI +R S LA A +E L P I I ++T+GD+ L I Sbjct: 18 RRPLRIASRKSTLAKAQVYECVRLLRS--WFPKLWIQIQTVNTQGDKDKTTPLRLIENSQ 75 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 FT+ ++K ++SG AVHSAKD+P + + A D D+ + K Sbjct: 76 FFTDAVDKLVLSGNSHLAVHSAKDLPNPPVTTII--AITQGLDPADLLVYGNRYLWKRFP 133 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +G+SSLRR+ +L + ++ RG IE RL +L + K AI++A A RL + Sbjct: 134 KNPKLGSSSLRREEILKKLFPAGKILHIRGTIEERLEQLESGKYDAIIVAKAAALRLHLK 193 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 E L P P QG + + K E K + + + E Sbjct: 194 LPYTEELPP---PYHPLQGRLSVTAA----KNIESWKKLLYPLNTSDITQENTL 240 >gi|256026474|ref|ZP_05440308.1| porphobilinogen deaminase [Fusobacterium sp. D11] gi|289764485|ref|ZP_06523863.1| porphobilinogen deaminase [Fusobacterium sp. D11] gi|289716040|gb|EFD80052.1| porphobilinogen deaminase [Fusobacterium sp. D11] Length = 220 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 78/220 (35%), Positives = 104/220 (47%), Gaps = 3/220 (1%) Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRS 143 KDMP KGL A RED RDV +S L L + IGTSSLRR L R Sbjct: 1 MKDMPAISPKGLICGAIPDREDPRDVLVSKNG-FLVTLPQGAKIGTSSLRRAMNLKAVRP 59 Query: 144 DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAI 203 D + RG I TRL KL AI+LA AG+KR I E L+ E FPP+P QG + Sbjct: 60 DFEIKHLRGNIHTRLKKLETEDYDAIILAAAGLKRTGMTDKITEYLSGEVFPPAPAQGVL 119 Query: 204 CIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYG 263 I+ N+ + +E++K I++E+ V ER F DG C + + ++ G + F Sbjct: 120 YIQCRENDKEIKEILKSIHNENVAKIVEIEREFSKIFDGGCHTPMGCYSQVNGDKIKFTA 179 Query: 264 IVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 + L GK + I AA+ I+ NK Sbjct: 180 VYLDE-GKQ-IRAVIEDDLTKGKEIAYMAAEEIKNKINKG 217 >gi|329942690|ref|ZP_08291469.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Chlamydophila psittaci Cal10] gi|332287285|ref|YP_004422186.1| porphobilinogen deaminase [Chlamydophila psittaci 6BC] gi|313847869|emb|CBY16864.1| putative porphobilinogen deaminase [Chlamydophila psittaci RD1] gi|325506761|gb|ADZ18399.1| porphobilinogen deaminase [Chlamydophila psittaci 6BC] gi|328814950|gb|EGF84939.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Chlamydophila psittaci Cal10] gi|328914531|gb|AEB55364.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Chlamydophila psittaci 6BC] Length = 245 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 65/205 (31%), Positives = 91/205 (44%), Gaps = 7/205 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++P RI +R S LA A E L P I I +ST+GD+ L + Sbjct: 18 RRPLRIASRKSTLAQAQVHECVRLLRS--WFPKLWIQIHTISTRGDKDKTTPLRLVENSQ 75 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 FT+ ++K +I G AVHSAKD+P + A D D+ + K Sbjct: 76 FFTDAVDKLVIRGNCHLAVHSAKDLPDPPATPV--VAITKGLDPSDLLVYAERYLWKRFP 133 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +G+SSLRR L + ++D RG IE RL +L N K AI++A A I RL Sbjct: 134 KVPRLGSSSLRRGETLKTLFPEGRILDIRGTIEERLEQLENGKYDAIVIAKAAILRLHLH 193 Query: 183 KVIKEILNIEDFPPSPGQGAICIET 207 ++L P P QG + I Sbjct: 194 LPYTKVLPP---PYHPLQGRLAITA 215 >gi|111220451|ref|YP_711245.1| porphobilinogen deaminase 1 [Frankia alni ACN14a] gi|111147983|emb|CAJ59649.1| Porphobilinogen deaminase 1 (PBG 1) (Hydroxymethylbilane synthase 1) (HMBS 1) (Pre-uroporphyrinogen synthase 1) [Frankia alni ACN14a] Length = 402 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 71/195 (36%), Positives = 108/195 (55%), Gaps = 4/195 (2%) Query: 13 SPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKL 72 S LAL + + L + + ++P+ T GDR +++IGG G+F + L Sbjct: 36 SALALTQSGMIAAQLRERV---GCAVDLVPIVTAGDRSPAE-ISQIGGTGVFVSALRDAL 91 Query: 73 ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSL 132 ++GEID AVHS KD+PT GL ++A RED RDV +S + + L L + + T + Sbjct: 92 LAGEIDLAVHSLKDLPTATPPGLVLAAVPTREDTRDVLVSPSGRGLAALGPGARVATGAP 151 Query: 133 RRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIE 192 RR A L V+ RG ++TRL K + + A++LAYAG+ RL + + EIL+ E Sbjct: 152 RRAAQLRALGLGFDVVAIRGNVDTRLKKAIDGEVDAVVLAYAGLARLDRLDAVTEILDPE 211 Query: 193 DFPPSPGQGAICIET 207 P+PGQGA+ +E Sbjct: 212 VMLPAPGQGALAVEC 226 >gi|167718597|ref|ZP_02401833.1| porphobilinogen deaminase [Burkholderia pseudomallei DM98] Length = 142 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 57/132 (43%), Positives = 86/132 (65%), Gaps = 2/132 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 13 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 70 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L +G ++A + RED RD F+S+ SL L + Sbjct: 71 VKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPVG 130 Query: 125 SVIGTSSLRRKA 136 +V+GTSSLRR+A Sbjct: 131 AVVGTSSLRREA 142 >gi|119587852|gb|EAW67448.1| hydroxymethylbilane synthase, isoform CRA_b [Homo sapiens] Length = 171 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 57/152 (37%), Positives = 79/152 (51%), Gaps = 5/152 (3%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + + R+GTR S LA ++L + P II +ST GD+I + L++IG K Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKASY--PGLQFEIIAMSTTGDKILDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSL 118 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H ++L Sbjct: 75 SLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTL 134 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDF 150 + L SV+GTSSLRR A L R + Sbjct: 135 ETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSI 166 >gi|62184962|ref|YP_219747.1| porphobilinogen deaminase [Chlamydophila abortus S26/3] gi|62148029|emb|CAH63781.1| putative porphobilinogen deaminase [Chlamydophila abortus S26/3] Length = 249 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 62/205 (30%), Positives = 90/205 (43%), Gaps = 7/205 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+P RI +R S LA A E L P I I +ST+GD+ + + Sbjct: 18 KRPLRIASRKSILAQAQVHECVRLLRS--WFPKLWIQIHTISTRGDKDKTTPIRLVENSQ 75 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 FT+ ++K +I G AVHSAKD+P + A D D+ + + Sbjct: 76 FFTDTVDKLVIRGNCHLAVHSAKDLPDPPATPV--VAITKGLDPSDLLVYAERYLWQRFP 133 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 +G+SS RR L ++D RG IE RL +L N K AI++A A + RL + Sbjct: 134 KVPRLGSSSSRRGETLKMLFPTGRILDIRGTIEERLEQLENGKYDAIVVAKAAVLRLHLQ 193 Query: 183 KVIKEILNIEDFPPSPGQGAICIET 207 ++L P P QG + I Sbjct: 194 LPYTKVLPP---PYHPLQGRLAITA 215 >gi|13676388|dbj|BAB41183.1| porphobilinogen deaminase [Amaranthus tricolor] Length = 198 Score = 125 bits (313), Expect = 9e-27, Method: Composition-based stats. Identities = 98/198 (49%), Positives = 133/198 (67%), Gaps = 1/198 (0%) Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115 +IGGKGLFT+EI++ L++ EID AVHS KD+PT L + + L RED+RD FIS TA Sbjct: 1 ADIGGKGLFTKEIDEALLNNEIDIAVHSMKDVPTYLPDKIILPCNLEREDVRDAFISTTA 60 Query: 116 QSLKDLALHSVIGTSSLRRKALL-LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA 174 SL DL SV+GT+SLRRK+ L R+ S + +FRG ++TRL KLN A LLA A Sbjct: 61 SSLADLPAGSVVGTASLRRKSQLLHRYPSLEVLDNFRGNVQTRLRKLNEGLVQATLLALA 120 Query: 175 GIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCER 234 G+KRL + + +L+I+D P+ QGAI I ++ K + ++NHE+T +V CER Sbjct: 121 GLKRLNMTENVSSVLSIDDMLPAVAQGAIGIACLQDDDKMANYLALLNHEETQLAVACER 180 Query: 235 AFLAELDGSCKSAIAGFA 252 AFL LDGSC++ IAG+A Sbjct: 181 AFLETLDGSCRTPIAGYA 198 >gi|269302924|gb|ACZ33024.1| porphobilinogen deaminase [Chlamydophila pneumoniae LPCoLN] Length = 234 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 64/222 (28%), Positives = 95/222 (42%), Gaps = 7/222 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+P RI +R S LA A E S L + P + T GDR L + Sbjct: 18 KRPLRIASRNSNLAKAQVHECISLLRSWY--PKLWFQLSTTETTGDRDKKIPLHLVENSY 75 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 FT+ ++ + G D A+HSAKD+ L + A D+ + + L Sbjct: 76 FFTDGVDALVHKGVCDLAIHSAKDL--PETPSLPVVAITRCLHPADLLVYADHYVHEPLP 133 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 L +G+SSLRR A+L + ++D RG IE RL++L+ AI+LA A RL Sbjct: 134 LRPRLGSSSLRRSAVLKQLFPQGQILDIRGTIEERLDQLHRGHYDAIVLAKAASLRLHLH 193 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224 L P QG++ I + K ++L I+ Sbjct: 194 HAYSIELPP---PYHALQGSLAITAKDHAGKWKQLFTPIHCH 232 >gi|29840104|ref|NP_829210.1| porphobilinogen deaminase [Chlamydophila caviae GPIC] gi|29834452|gb|AAP05088.1| porphobilinogen deaminase HemC, putative [Chlamydophila caviae GPIC] Length = 242 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 61/205 (29%), Positives = 89/205 (43%), Gaps = 7/205 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 ++P RI +R S LA A A E L P + I + T GD+ L + Sbjct: 18 RRPLRIASRRSTLAQAQAHECVCLLRS--WFPKLWVQIHTVHTLGDKDKKTPLHLVENSQ 75 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 FT+ ++K ++ G AVHSAKD+ I A D D+ + K Sbjct: 76 FFTDAVDKLVLRGNCHLAVHSAKDL--PNPSKTSIVAITNGLDPSDLLVYGERYLWKRFP 133 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 + +G+SSLRR +L ++D RG IE RL +L + K AI++A A + RL Sbjct: 134 KNPRLGSSSLRRGEMLKNLFPKGQILDIRGTIEERLKQLESGKYDAIVVAKAAVIRLHLR 193 Query: 183 KVIKEILNIEDFPPSPGQGAICIET 207 + L P P QG + I Sbjct: 194 LPYTKTLPP---PYHPLQGRLSITA 215 >gi|217070488|gb|ACJ83604.1| unknown [Medicago truncatula] Length = 214 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 93/211 (44%), Positives = 125/211 (59%), Gaps = 4/211 (1%) Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALL-LRWR 142 KD+PT L + + LPRED+RD FIS +A SL DL SVIGT+SLRRK+ + R+ Sbjct: 1 MKDVPTYLPEKTILPCNLPREDVRDAFISLSAASLADLPAGSVIGTASLRRKSQILHRYP 60 Query: 143 SDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGA 202 S +FRG ++TRL KL+ A LLA AG KRL + + L+I+D P+ QGA Sbjct: 61 SLSVQDNFRGNVQTRLRKLSEGVVKATLLALAGPKRLNMTENVTSTLSIDDMLPAVAQGA 120 Query: 203 ICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA-YCKGSTLYF 261 I I N+ K E + +NHE+T +++CERAFL LDGSC++ IAG+A K F Sbjct: 121 IGIACRSNDDKMAEYLASLNHEETRLAISCERAFLTTLDGSCRTPIAGYASRDKDGNCLF 180 Query: 262 YGIVLASDGKIFHEVSRNGN--RCDAINIGR 290 G+V + DG E SR G D + +GR Sbjct: 181 RGLVASPDGTRVLETSRIGPYAYEDMMKMGR 211 >gi|15617976|ref|NP_224260.1| porphobilinogen deaminase [Chlamydophila pneumoniae CWL029] gi|15835588|ref|NP_300112.1| porphobilinogen deaminase [Chlamydophila pneumoniae J138] gi|16752992|ref|NP_445265.1| porphobilinogen deaminase [Chlamydophila pneumoniae AR39] gi|33241388|ref|NP_876329.1| porphobilinogen deaminase [Chlamydophila pneumoniae TW-183] gi|11386861|sp|Q9Z9C9|HEM3_CHLPN RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|4376307|gb|AAD18205.1| Porphobilinogen Deaminase [Chlamydophila pneumoniae CWL029] gi|7189637|gb|AAF38528.1| porphobilinogen deaminase HemC, putative [Chlamydophila pneumoniae AR39] gi|8978426|dbj|BAA98263.1| porphobilinogen deaminase [Chlamydophila pneumoniae J138] gi|33235896|gb|AAP97986.1| hydroxymethylbilane synthase [Chlamydophila pneumoniae TW-183] Length = 234 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 64/222 (28%), Positives = 95/222 (42%), Gaps = 7/222 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 K+P RI +R S LA A E S L + P + T GDR L + Sbjct: 18 KRPLRIASRNSNLAKAQVHECISLLRSWY--PKLWFQLSTTETTGDREKKIPLHLVENSY 75 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 FT+ ++ + G D A+HSAKD+ L + A D+ + + L Sbjct: 76 FFTDGVDALVHKGVCDLAIHSAKDL--PETPSLPVVAITRCLHPADLLVYADHYVHEPLP 133 Query: 123 LHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE 182 L +G+SSLRR A+L + ++D RG IE RL++L+ AI+LA A RL Sbjct: 134 LSPRLGSSSLRRSAVLKQLFPQGQILDIRGTIEERLDQLHRGHYDAIVLAKAASLRLHLH 193 Query: 183 KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHE 224 L P QG++ I + K ++L I+ Sbjct: 194 HAYSIELPP---PYHALQGSLAITAKDHAGKWKQLFTPIHCH 232 >gi|76801314|ref|YP_326322.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Natronomonas pharaonis DSM 2160] gi|76557179|emb|CAI48754.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Natronomonas pharaonis DSM 2160] Length = 361 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 5/161 (3%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + R+ TR S LAL A +L + + ++ + T GD + + + +G Sbjct: 1 MTE-TIRLATRGSDLALRQAQRVADALDSRRR----TVELVEVETTGDAVRDELIHRLGK 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G F +++K+I G++D AVHS KDMPT+ L ++ R DV ++ +L Sbjct: 56 TGAFVRSLDEKVIDGDVDAAVHSMKDMPTEFPDELVVAGVPERASPGDVLVTPDGDTLDS 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 L + +GTSSLRRKA LL R D+ V RG ++TR+ KL Sbjct: 116 LPDGATVGTSSLRRKAQLLAARPDLDVQPLRGNVDTRVQKL 156 Score = 81.7 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 9/152 (5%) Query: 154 IETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 IETR I+LA AG++R ++ E F P+ GQGA+ + T + Sbjct: 212 IETRF--------DGIVLAEAGLQRTGLLAQVETERLPETFVPAAGQGALAV-TACDGDV 262 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIF 273 Q L ++H T ER L L G C + + A +G + VL+ DG Sbjct: 263 GQTLQNELDHPRTRVETTVERTILGTLGGGCVAPVGIHAVVRGEYVQASVRVLSQDGTEE 322 Query: 274 HEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 E +R+ R+ A + ++ Sbjct: 323 IEATRDLPIERHPEAAREFADELADRGAADLI 354 >gi|159483239|ref|XP_001699668.1| porphobilinogen deaminase [Chlamydomonas reinhardtii] gi|158281610|gb|EDP07364.1| porphobilinogen deaminase [Chlamydomonas reinhardtii] Length = 380 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 90/318 (28%), Positives = 145/318 (45%), Gaps = 26/318 (8%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLS--TKGDRITNRTLTEIGG 60 ++P I TR S LA + + L+ ++ + + L ++GD +L +G Sbjct: 60 QRPLVIATRPSKLAKEQTRQVQQLLLAAAQLKDEQLQLSTLELASRGDTTQGVSLRSLG- 118 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G FTEE+++ ++SG D +VHS KD P L GL ++A LPR D RDV I+ A SL + Sbjct: 119 SGAFTEELDQAVLSGAADMSVHSLKDCPAALAPGLLLAACLPRADPRDVLIAPEATSLGE 178 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK 180 L S +GTSS RR A + + V+ RG +++RL ++ + A +LA AG+KRL Sbjct: 179 LVPGSRVGTSSSRRAAQIKHSFPHLQVVQLRGNVDSRLGRIRSRDIGATVLAAAGLKRLG 238 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 D + GA+ + ++ L+ I+H T V ERA LA L Sbjct: 239 VMN--------SDEGDTTATGAVGVVCRADDEWVVGLLDAISHRGTALEVAAERACLAAL 290 Query: 241 DG-------SCKSAIAGFAYC----KGSTLYFYGIVLASDGKIFHEVSR----NGNRCDA 285 G S IA + +T+ +V +GK + + DA Sbjct: 291 LGGGGACQRSAFPDIAWACHTRHDPDSNTMDLDCLVADLEGKELFRYTEFYRPVIDEVDA 350 Query: 286 INIGRDAAQYIRFISNKN 303 +++G +R ++ Sbjct: 351 VSLGSLYGSLLRMMAPPG 368 >gi|15835189|ref|NP_296948.1| porphobilinogen deaminase [Chlamydia muridarum Nigg] gi|270285361|ref|ZP_06194755.1| porphobilinogen deaminase [Chlamydia muridarum Nigg] gi|270289377|ref|ZP_06195679.1| porphobilinogen deaminase [Chlamydia muridarum Weiss] gi|301336758|ref|ZP_07224960.1| porphobilinogen deaminase [Chlamydia muridarum MopnTet14] gi|11386847|sp|Q9PK95|HEM3_CHLMU RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|7190611|gb|AAF39408.1| porphobilinogen deaminase HemC, putative [Chlamydia muridarum Nigg] Length = 242 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 63/206 (30%), Positives = 95/206 (46%), Gaps = 7/206 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+ +R SPLA+ A E L P +I +T+GD + L + G F Sbjct: 20 PLRLASRKSPLAVLQAHECLRRLQ--TFFPRLWGQVITETTQGDLDQHTPLHSVENTGFF 77 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T++I+ + SG+ D A+HSAKD+ ++ A D RD+ + L+ Sbjct: 78 TDDIDFLVQSGKCDLAIHSAKDL--PEKPKARVIAITASIDPRDILVFQEKYLLQPFPSR 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IG SS RR+AL+ + D RG I+TRL L+ K AI++A A + RL Sbjct: 136 LRIGCSSDRRRALISSLYPSAVITDIRGTIQTRLALLDQQKFDAIVMANAAVSRLGLRLP 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVN 210 +L P P QG + I + + Sbjct: 196 CTVVLPP---PYHPFQGRLAITSCHH 218 >gi|45644676|gb|AAS73064.1| predicted porphobilinogen deaminase [uncultured marine gamma proteobacterium EBAC20E09] Length = 291 Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 79/310 (25%), Positives = 128/310 (41%), Gaps = 31/310 (10%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 +I +R S LALA E + II + T+GD I + + K F Sbjct: 2 TIKIASRSSKLALAQVEEFVKK------FGISDYKIIKVKTEGD-IKSANGETLFDKAHF 54 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +++K L++GE D AVHSAKD P GL +LP + +DV I Sbjct: 55 VSDVQKCLLNGEADIAVHSAKDTPAGETTGLLRY-FLPSQSNQDVLIFRE---EDKFNSE 110 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +GTSSLRR+ + I++++ G ++TRL KL+ + I+LA AG+ RLK Sbjct: 111 MKLGTSSLRRQLQAKHHLNAINIVNLSGNVDTRLEKLSQGEYDCIILAKAGLARLKLLNE 170 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELV----KVINHEDTWDSVNCERAFLAEL 240 + + D+ + GQG +CIE + + +++ ER+ L + Sbjct: 171 L--QYEVMDWSTASGQGFLCIEVLNDPSADIYNFLLKSIREIDLNLGKNISTERSILEAI 228 Query: 241 DGSCKSAIAGFA----YCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + C SAI+ + S L G + E + + +A I Sbjct: 229 NAGCNSAISIQTQSNLESENSQLIHLGEIYG------VEKYISFSGTNAEKTI----NDI 278 Query: 297 RFISNKNVFN 306 + + N Sbjct: 279 KNQDGLKLLN 288 >gi|58699795|ref|ZP_00374427.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila ananassae] gi|58533687|gb|EAL58054.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila ananassae] Length = 199 Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 69/202 (34%), Positives = 107/202 (52%), Gaps = 6/202 (2%) Query: 99 AYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRL 158 L R D FISH SL+ L + I TS++RRK LL +R D++++ RG + TR Sbjct: 1 CVLERLSPCDAFISHKHNSLESLPQQATIATSAIRRKVQLLNFRPDLNIVPLRGNVTTR- 59 Query: 159 NKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV 218 L N I+LA AG+ RL+K +I E+L + + GQGAICI+ N+ K +L+ Sbjct: 60 --LQNQSFDGIILAEAGLIRLEKHHLITEVLPPKVMLSAVGQGAICIQCRRNDVKIIDLL 117 Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY-CKGSTLYFYGIVLASDGKIFHEVS 277 + IN+ ++ V ER+F+ ++GSC + +A A + LY ++ DGK + Sbjct: 118 EKINNNMSFIGVKSERSFMKTVNGSCFTPLAALAEYVSENMLYLRCMLA--DGKNIYFTE 175 Query: 278 RNGNRCDAINIGRDAAQYIRFI 299 R DA +G DA ++ Sbjct: 176 RTSFIEDAEKMGMDAGLELKSK 197 >gi|209732910|gb|ACI67324.1| Porphobilinogen deaminase [Salmo salar] Length = 174 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 58/151 (38%), Positives = 78/151 (51%), Gaps = 5/151 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 + R+GTR S LA L ++ P ++ I+ +ST GD+I + L++IG K Sbjct: 17 NRVIRMGTRKSQLARIQTDYVAEKLKTLY--PDVHLEIVAMSTIGDKILDTALSKIGEKS 74 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLK 119 LFT+E+E L E+D VHS KD+PT L G I A L RE D + H +L Sbjct: 75 LFTKELENALERNEVDLVVHSLKDLPTTLPNGFTIGAVLQRESPHDAVVLHPKNSGLTLD 134 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDF 150 L SVIGTSSLRR A L + + D Sbjct: 135 TLPDGSVIGTSSLRRAAQLKKRFPHLEFKDI 165 >gi|261884538|ref|ZP_06008577.1| porphobilinogen deaminase [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 174 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 75/171 (43%), Positives = 110/171 (64%), Gaps = 1/171 (0%) Query: 35 PHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKG 94 H++ IIP+ TKGD I + L +IGGKGLF++E+E ++ G D AVHS KD+PT G Sbjct: 5 GHSVEIIPMKTKGDVILDTPLAKIGGKGLFSKELETSMLEGSADIAVHSLKDVPTTFPDG 64 Query: 95 LQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKI 154 L+++ RED+RD +S ++L +L + +GT+SLRRK +L R+D+ +I RG + Sbjct: 65 LKLACVCSREDVRDAMLSMKYKNLDELPQGAKVGTTSLRRKMQILAHRADLDIISLRGNV 124 Query: 155 ETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICI 205 +R+ KL N + AI+LA AGI RL + K K L+I P+ GQGA+ I Sbjct: 125 NSRIAKLKNGEFDAIILAMAGINRLNRSKDDKATLSINTI-PAMGQGALGI 174 >gi|294953467|ref|XP_002787778.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983] gi|239902802|gb|EER19574.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983] Length = 553 Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 72/316 (22%), Positives = 117/316 (37%), Gaps = 45/316 (14%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 RIG+R S LA L ++ + + GD L ++ Sbjct: 5 SNATLRIGSRRSDLARLQTLMVADRLEEM----GYEVECEYQEAPGDTNLKDPLWKMPET 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT + +KL+ G +D VHS KD+P G ++A LPR D RD+ I + Sbjct: 61 GVFTTFLRQKLLEGSVDLVVHSWKDLPLAEEAGTTVAATLPRADPRDLIIIRKDAEAEIR 120 Query: 122 ALHSV--IGTSSLRRKALLLRWRSD-------ISVIDFRGKIETRLNKLNN--------- 163 A++ + +SS RR+ L + + D RG I+TR+ KL + Sbjct: 121 AMNGKLIVLSSSPRRQWNLPAFLQRAVPGVETVEFRDVRGNIQTRMRKLMDPARHNASLG 180 Query: 164 NKAHAILLAYAGIKRLKKEKV-----------------IKEILNIEDFPPSPGQGAICIE 206 + HA++LA A + R + +L + P + QGA+ +E Sbjct: 181 PRPHALVLAKAAVDRFAQSHREEFRNSRELVEGYLSKCHCMVLPLSANPTAAAQGALGVE 240 Query: 207 THVNNPKAQ--ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA--GFAYCKGSTLYFY 262 + K ++V +N E T+ + E+ L G C I G + Sbjct: 241 VSTASEKEHVRKIVSKLNDEQTFQAAWREKEVLGAYGGGCHQRIGCTVLPRWYGKVEHLR 300 Query: 263 GIVLASDGKIFHEVSR 278 G G Sbjct: 301 GR--TDGGVDLLRSEI 314 >gi|325526662|gb|EGD04197.1| porphobilinogen deaminase [Burkholderia sp. TJI49] Length = 141 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 52/126 (41%), Positives = 78/126 (61%), Gaps = 2/126 (1%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 I +R S LA+ A R +L ++ P ++ I+ ++T+GD+I +RTL+++GGKGLF Sbjct: 18 TLTIASRESRLAMWQAEHVRDALRKLY--PACDVKILGMTTRGDQILDRTLSKVGGKGLF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 +E+E L G D AVHS KD+P L G ++A + RED RD F+S+ SL L Sbjct: 76 VKELENALADGRADLAVHSLKDVPMALPDGFSLAAIMSREDPRDAFVSNDYASLDALPAG 135 Query: 125 SVIGTS 130 +V+GTS Sbjct: 136 AVVGTS 141 >gi|147899551|ref|NP_001088263.1| hydroxymethylbilane synthase [Xenopus laevis] gi|54038668|gb|AAH84265.1| LOC495094 protein [Xenopus laevis] Length = 256 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 61/233 (26%), Positives = 90/233 (38%), Gaps = 30/233 (12%) Query: 103 REDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 + + +L L SVIGTSSLRR A L + + D RG + TRL KL+ Sbjct: 14 HMMPWCFTLKKSGNTLSTLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRLKKLD 73 Query: 163 -NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVI 221 AI+LA AG++R+ E I +IL ++ + GQGA+ +E + +V + Sbjct: 74 EQEDFSAIVLAAAGLRRMGWENRIGQILTSDECLYAVGQGALAVEVRTKDQDILSMVSAL 133 Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEV----- 276 +T ERAF+ L+G C +A K LY G V + DG + Sbjct: 134 QDPETVLRCVAERAFMKRLEGGCSVPVAVSTVVKDLQLYLTGAVYSLDGSDSLKETMQSC 193 Query: 277 ------SRNGNRCD------------------AINIGRDAAQYIRFISNKNVF 305 G D A +G A + K + Sbjct: 194 VNFLQQEVEGPNDDVQHVGITALGVSQQALESAQCLGTGLADLLLSKGAKEIL 246 >gi|294919063|ref|XP_002778511.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983] gi|239886970|gb|EER10306.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983] Length = 553 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 72/316 (22%), Positives = 117/316 (37%), Gaps = 45/316 (14%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 RIG+R S LA L ++ + + GD L ++ Sbjct: 5 SNATLRIGSRRSDLARLQTLMVADRLEEM----GYKVECEYQEAPGDTNLKDPLWKMPET 60 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 G+FT + +KL+ G +D VHS KD+P G ++A LPR D RD+ I + Sbjct: 61 GVFTTFLRQKLLDGSVDLVVHSWKDLPLAEEAGTTVAATLPRADPRDLIIIRKDAEAEIR 120 Query: 122 ALHSV--IGTSSLRRKALLLRWRSD-------ISVIDFRGKIETRLNKLNN--------- 163 A++ + +SS RR+ L + + D RG I+TR+ KL + Sbjct: 121 AMNGKLIVLSSSPRRQWNLPAFLQRAVPGVETVEFRDVRGNIQTRMRKLMDPARHDASLG 180 Query: 164 NKAHAILLAYAGIKRLKKEKV-----------------IKEILNIEDFPPSPGQGAICIE 206 + HA++LA A + R + +L + P + QGA+ +E Sbjct: 181 PRPHALVLAKAAVDRFAQSHRGEFRNSRELVQGYLSKCHCMVLPLSANPTAAAQGALGVE 240 Query: 207 THVNNPKAQ--ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA--GFAYCKGSTLYFY 262 + K ++V +N E T+ + E+ L G C I G + Sbjct: 241 VSTASEKGHVRKIVSKLNDEQTFQAAWREKEVLGAYGGGCHQRIGCTVLPRWYGKVGHLR 300 Query: 263 GIVLASDGKIFHEVSR 278 G G Sbjct: 301 GR--TDGGVDLLRSEI 314 >gi|322371455|ref|ZP_08046004.1| porphobilinogen deaminase [Haladaptatus paucihalophilus DX253] gi|320548987|gb|EFW90652.1| porphobilinogen deaminase [Haladaptatus paucihalophilus DX253] Length = 366 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 55/163 (33%), Positives = 94/163 (57%), Gaps = 6/163 (3%) Query: 1 MEKK--PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M + R+ TR S LA+ + E +++L D ++ ++ + T GD++ + +TE+ Sbjct: 1 MSNRGTELRLATRGSDLAIRQSGEVKAALEDRR----FSVELVEVETTGDQLDDALITEL 56 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G G F ++++++ E+D A+HS KDMPT L ++A R DV ++ + + Sbjct: 57 GKTGAFVRNLDQEVLDEEVDGAIHSMKDMPTDHPDELVVAAVPERASANDVLVTPDGKPI 116 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 L +V+GTSSLRRKA LL +R D++V RG ++TR+ KL Sbjct: 117 DALPDGAVVGTSSLRRKAQLLNFRPDLTVKPLRGNVDTRIEKL 159 Score = 93.3 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 2/142 (1%) Query: 165 KAHAILLAYAGIKRLK-KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223 + I+LA AG++R V + L + F P+PGQGA+ + T AQ+L V++H Sbjct: 218 EYDGIVLAEAGLQRSGLAHHVEYDRLPPKQFVPAPGQGALAVMTLDGEL-AQDLHTVLDH 276 Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283 T ER L EL+G C + I + +G ++ V + DG + R+ Sbjct: 277 PRTRVETTVERTILRELNGGCIAPIGVHSIIQGENVHVEAQVFSQDGSEVISIKRDVPVE 336 Query: 284 DAINIGRDAAQYIRFISNKNVF 305 + + A+ + +++ Sbjct: 337 THVTGAKKVAEELADRGARDLI 358 >gi|297620494|ref|YP_003708631.1| Porphobilinogen deaminase/Uroporphyrinogen-III synthase [Waddlia chondrophila WSU 86-1044] gi|297375795|gb|ADI37625.1| Porphobilinogen deaminase/Uroporphyrinogen-III synthase [Waddlia chondrophila WSU 86-1044] Length = 472 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 64/249 (25%), Positives = 108/249 (43%), Gaps = 9/249 (3%) Query: 2 EKKPFRIGTRCSPLALAHAFET--RSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIG 59 + R SPL+ A E + L+ P + ++T GDR +L + Sbjct: 55 STNRITVAARSSPLSEAQVDEILYEAQLIQ----PTLEFEVTLVTTLGDRDQESSLRTLE 110 Query: 60 GKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLK 119 FT +I++ L++G AVHSAKD+P + GL I A D D + +L Sbjct: 111 KTDFFTRDIDQLLLNGYCRIAVHSAKDLPDPIPNGLNIIAVNQGLDPSDSLVMRPGDTLS 170 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 L + I TSS+RR+ + RSD+ V+D RG I RL KLN+ + +++A + + RL Sbjct: 171 SLPKGAKIATSSIRREKAVHSLRSDLEVVDIRGNIGQRLQKLNDREVDGVIVAESALIRL 230 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 + + L E +PGQG + + ++ +A ++ + + Sbjct: 231 NLYHLNRIHLPGE---TAPGQGKLAVVAREDDEEAAVFFSAMDQRPITVYLGLKPPKDTA 287 Query: 240 LDGSCKSAI 248 + I Sbjct: 288 IKKFHHCPI 296 >gi|313124929|ref|YP_004035193.1| hydroxymethylbilane synthase [Halogeometricum borinquense DSM 11551] gi|312291294|gb|ADQ65754.1| hydroxymethylbilane synthase [Halogeometricum borinquense DSM 11551] Length = 375 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 56/161 (34%), Positives = 91/161 (56%), Gaps = 4/161 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M++ R+ TR S LAL R +L D ++ ++ + T+GD+I + L +G Sbjct: 1 MKRGTLRLATRGSDLALRQTASVRDTLADRR----FDVELVEVETRGDQIRDELLHRLGK 56 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G F ++++++ E+D AVHS KDMPT+ + L ++ R DV ++ + ++ Sbjct: 57 TGAFVRALDERVLDEEVDAAVHSMKDMPTEHPRDLVVAGVPERAPANDVLLTPDGTAFEN 116 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 L SV+GTSSLRRKA +L R D+ V RG ++TR+ KL Sbjct: 117 LPAGSVVGTSSLRRKAQILSARPDLEVEPLRGNVDTRVEKL 157 Score = 88.7 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 1/142 (0%) Query: 165 KAHAILLAYAGIKRLKKEKV-IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223 + AI+LA AG+KR + L +F P+PGQGAI + ++ + ++ Sbjct: 220 EYDAIVLAEAGLKRSGLLHRVEYDRLPPTEFVPAPGQGAIAVTARRDHENLDRIQDALDD 279 Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283 T + ER LAEL G C + I A +G ++ VL++DG+ SRN Sbjct: 280 PRTRVTTTVERTVLAELGGGCIAPIGVHAKLQGEHVHVTARVLSTDGEEEVSASRNLPVH 339 Query: 284 DAINIGRDAAQYIRFISNKNVF 305 + N + A+ + ++ Sbjct: 340 NHANAAAEFAESLASQGAADLI 361 >gi|226294065|gb|EEH49485.1| porphobilinogen deaminase [Paracoccidioides brasiliensis Pb18] Length = 249 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 17/232 (7%) Query: 92 LKGLQISAYLPREDIRDVFISHTAQSLK---DLALHSVIGTSSLRRKALLLRWRSDISVI 148 + A +PRED RDV + +L SV+GTSS+RR A L R + Sbjct: 7 PNPCALGAVVPREDPRDVLVIKKGLPKMTLAELPAGSVVGTSSVRRIAQLSRHYPHLKPQ 66 Query: 149 DFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIED--FPPSPGQGAIC 204 D RG IETRL KL+ + I+LA AG+ R + I L+ ++ + GQGA+ Sbjct: 67 DIRGNIETRLAKLDAEDGPFTCIILAAAGLLRTGQGARISHFLDSKNGKMLHAVGQGALG 126 Query: 205 IETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST------ 258 +E ++ + + +++ I + ER+ L L+G C + + Sbjct: 127 VEIRADDERMRAMIEKIGDRRATFACLAERSLLRTLEGGCSAPLGVETEWVKGEGQGEVE 186 Query: 259 -LYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNKNVFN 306 L IV + DGK EV + +A G+ A+ + + Sbjct: 187 KLRLRAIVASVDGKEAVEVEMEAEIRSEAEAEWFGKTVAEELIVKGAGKILE 238 >gi|47200553|emb|CAF87716.1| unnamed protein product [Tetraodon nigroviridis] Length = 199 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 96/200 (48%), Gaps = 30/200 (15%) Query: 13 SPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKL 72 S LA L +++ P ++ I+ +ST GD+I + L++IG K LFT+E+E L Sbjct: 1 SQLARIQTDSVAEKLKELY--PDVHLEIVAMSTIGDKILDTALSKIGEKSLFTKELENAL 58 Query: 73 ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGT 129 E+D VHS KD+PT L G I A L RE+ D + H ++L L HSVIGT Sbjct: 59 ERNEVDLVVHSLKDLPTSLPPGFTIGAVLKRENPHDAVVLHPKNAGKTLDALPAHSVIGT 118 Query: 130 SSLRRKALLLRWRSDISVIDF------------------------RGKIETRLNKLN-NN 164 SSLRR A L + + D RG + TRL KL+ Sbjct: 119 SSLRRAAQLKKRFPHLDFKDIVSSERCFLPVQPGHRCFFLSSRSQRGNLNTRLKKLDEKE 178 Query: 165 KAHAILLAYAGIKRLKKEKV 184 AI+ A AG++R+ + Sbjct: 179 DFAAIISAAAGLRRMGWDNR 198 >gi|323451311|gb|EGB07188.1| hypothetical protein AURANDRAFT_59094 [Aureococcus anophagefferens] Length = 331 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 125/319 (39%), Gaps = 26/319 (8%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL-F 64 +I TR SPLA+ A +L P ++ +S+ G+ N L + F Sbjct: 18 VKIATRPSPLAVKQAERVAETLRRA--DPALTTELVRISSTGEYRNNTPLPLALDPTVDF 75 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPT---KLLKGLQISAYLPREDIRDVFISHTAQSLKDL 121 T ++ + SG +D AVHS KD+P E D + S+ + Sbjct: 76 TGLLDDAVGSGAVDVAVHSLKDLPPANRWRGDLRVACHLPRTESAADALV--GYASMDLV 133 Query: 122 ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK- 180 + +GT+S RR+ALL R D+ V+ RG + RL L+ A++L AG++RL+ Sbjct: 134 PRGARVGTASQRRRALLRCARPDLDVVTVRGNVHARLETLDRGDVDALILGAAGLQRLEL 193 Query: 181 KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAEL 240 + IL+ ++ P+P QG + + +L+ + D + ERA L Sbjct: 194 LDARRHAILSFDEMLPAPAQGIVGAVARGDGGALGDLLARADDRDARIAATAERAVLDVA 253 Query: 241 DGSC----KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG------- 289 D + + + G+ + DG + + +A +G Sbjct: 254 DAASPGAGRPPTSAAMTRDGAAWLLRARLTRPDGSRSAATT---STVEADQLGDGDAAAR 310 Query: 290 ---RDAAQYIRFISNKNVF 305 A + + + + F Sbjct: 311 EFGAAAGRDLLRRAGPDFF 329 >gi|42524803|ref|NP_970183.1| hydroxymethylbilane synthase [Bdellovibrio bacteriovorus HD100] gi|39577013|emb|CAE78242.1| hydroxymethylbilane synthase [Bdellovibrio bacteriovorus HD100] Length = 502 Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 75/288 (26%), Positives = 119/288 (41%), Gaps = 31/288 (10%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 RI R S LA A+ +L + K P I + GD+ L +I KG+FT Sbjct: 3 LRISARKSDLARLQAYMVGDALKE--KNPQIEIDYRFRESLGDKNLTDPLWKIPEKGVFT 60 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRD-VFISHTAQSLKDLALH 124 E+ +L+ E D VHS KD+PT+ I+A LPR D RD + + + + Sbjct: 61 EDFFGELLRDETDLVVHSWKDLPTEHKSETVIAATLPRADQRDLLLVKKSHFDKIKTSKT 120 Query: 125 SVIGTSSLRRKALLLRWR--------SDISVIDFRGKIETRLNKL-NNNKAHAILLAYAG 175 + +SS RR+ L + D+ RG + TR+ KL + + +++A A Sbjct: 121 LKVFSSSPRREYNLTGFFKEHLPFGLQDVKFESVRGNMLTRVRKLIESPETDGLIVAKAA 180 Query: 176 IKRL-----------------KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV 218 RL ++ +L + P + QGA+ +E + Q+L+ Sbjct: 181 FDRLFSATLPEFLEGQQQLRQYFNELNWVVLPLSVNPNAAAQGALAVEVLKSRQDLQDLL 240 Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIA--GFAYCKGSTLYFYGI 264 + I+H DT+ ER L+ G C I A G G+ Sbjct: 241 QSIHHADTFHCSQKERDVLSSFGGGCHQKIGVAVLARPYGQITLLKGL 288 >gi|222480661|ref|YP_002566898.1| porphobilinogen deaminase [Halorubrum lacusprofundi ATCC 49239] gi|222453563|gb|ACM57828.1| porphobilinogen deaminase [Halorubrum lacusprofundi ATCC 49239] Length = 385 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 5/168 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M R+ TR S LAL A R +L + ++ + + T+GD+I + + +G Sbjct: 1 MTD-TLRLATRGSDLALRQAGTVRDALSSRRR----DVELRRVETRGDQIPDEMIHRLGK 55 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 G F ++++++ G+ D AVHS KD+PT+ + + I+ R DV + ++D Sbjct: 56 TGAFVRALDEEVLGGDADLAVHSLKDVPTEGMDDMVIAGVPERAPSGDVLVHPDGLGIED 115 Query: 121 LALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHA 168 L SV+GT SLRR A + R D+ V RG ++TR+ KL A Sbjct: 116 LPSGSVVGTGSLRRTAQIKAARPDLVVEPLRGNVDTRVEKLLAPDLQA 163 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 3/149 (2%) Query: 159 NKLNNNKAHAILLAYAGIKRLKKEKVIKEILNI-EDFPPSPGQGAICIETHVNNPKAQEL 217 K+ AI+LA AG++R + + E+F P+ GQGAI + T + +++ Sbjct: 223 RKVETE-YDAIVLAEAGLRRSELFYEVPTTRLPREEFVPAAGQGAIAV-TATDPDVIEDV 280 Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277 ++H T +V ER L EL+G C + I A +G ++ VL++DG + Sbjct: 281 RSAVDHPRTRVAVTVERTILGELNGGCVAPIGVSALVQGEHVHTRVRVLSTDGTEEVADT 340 Query: 278 RNGNRCDAINIGRDAAQYIRFISNKNVFN 306 R+ + A + + Sbjct: 341 RDLPIRSHAKAAEEFAADLADRGAAELIE 369 >gi|254380811|ref|ZP_04996177.1| porphobilinogen deaminase 2 [Streptomyces sp. Mg1] gi|194339722|gb|EDX20688.1| porphobilinogen deaminase 2 [Streptomyces sp. Mg1] Length = 231 Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats. Identities = 69/223 (30%), Positives = 110/223 (49%), Gaps = 10/223 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 R+GTR SP+AL + P + I+ + ++GDR L+ IGGKG F Sbjct: 10 TVRLGTRPSPMALEQTGRFADVFRARY--PQVVLDIVEIVSEGDRHRG-PLSTIGGKGAF 66 Query: 65 TEEIEKKLISGEIDCAVHSAKDMP--TKLLKGLQISAYLPREDIRDVFI---SHTAQSLK 119 T ++ L+ G + + AKD+P G+ I+A LPRED RD + H +L Sbjct: 67 TRNADRYLLDGRVQATIACAKDVPGPHDRSPGIVIAAVLPREDTRDALVLPTGHPVTTLA 126 Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNK--AHAILLAYAGIK 177 +L + +GTS+ RR ALL + + RG ++RL L+ + A ++ A AG++ Sbjct: 127 ELPPGTRVGTSAPRRSALLKALHPTLVQVPIRGNADSRLRALDAGRLGADVMIAALAGLR 186 Query: 178 RLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220 RL E EIL+ + P+ G G + +E ++P L+ Sbjct: 187 RLGHEDRASEILDPAVWLPAAGAGTVIVEHRSDDPATGWLLAP 229 >gi|307254894|ref|ZP_07536716.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306862135|gb|EFM94107.1| Porphobilinogen deaminase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] Length = 119 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 42/105 (40%), Positives = 58/105 (55%), Gaps = 2/105 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K RI TR SPLAL A + L + P ++ ++ + TKGD I + L +IGGK Sbjct: 6 MKDTLRIATRQSPLALWQANFVKDELEK--RFPELSVELVTMVTKGDVILDTPLAKIGGK 63 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI 106 GLF +E+E L+ D AVHS KD+P +GL ++ RED Sbjct: 64 GLFVKELELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDP 108 >gi|306835115|ref|ZP_07468155.1| possible hydroxymethylbilane synthase [Corynebacterium accolens ATCC 49726] gi|304568972|gb|EFM44497.1| possible hydroxymethylbilane synthase [Corynebacterium accolens ATCC 49726] Length = 158 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 1/157 (0%) Query: 149 DFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH 208 RG I+TR++K+ + + A++LAYAG+ R E +I + E F P+P QGA+ IE Sbjct: 1 PLRGNIDTRMSKVTDGELDAVVLAYAGLLRGGYEDRASDIFDPELFMPAPAQGALAIEAV 60 Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS 268 A L V++ E + ERA LA L+ C + +A + G L G V A Sbjct: 61 AGTEAAAALDAVVD-EQATAAALAERAVLARLEAGCTAPVAATSRWNGDQLTVRGGVFAL 119 Query: 269 DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 DG + +G +A +G + + ++ Sbjct: 120 DGSRQLTATASGTAAEAAELGARVSDELFAQGAADLL 156 >gi|266622116|ref|ZP_06115051.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Clostridium hathewayi DSM 13479] gi|288866179|gb|EFC98477.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Clostridium hathewayi DSM 13479] Length = 107 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 53/109 (48%), Positives = 62/109 (56%), Gaps = 2/109 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K RIGTR S LA+ +L V P I+ T+GDRI N+ L E GGK Sbjct: 1 MNKTIRIGTRKSALAMVQTELVAEALKQV--QPGLETRIVTKVTEGDRILNKPLLEFGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF 110 G+F E E+ L +GEID AVHSAKD+P L GL I A PRED RDV Sbjct: 59 GVFVTEFEQALQNGEIDFAVHSAKDLPMDLEDGLGIVAVPPREDPRDVL 107 >gi|257052010|ref|YP_003129843.1| porphobilinogen deaminase [Halorhabdus utahensis DSM 12940] gi|256690773|gb|ACV11110.1| porphobilinogen deaminase [Halorhabdus utahensis DSM 12940] Length = 373 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 57/163 (34%), Positives = 88/163 (53%), Gaps = 6/163 (3%) Query: 1 MEKK--PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M + FR+ TR S LAL R +L H + ++ + T GD + + + + Sbjct: 1 MSSRATTFRLATRGSDLALRQTGAIRDALESRR----HEVELLEVETTGDELRDELIHRL 56 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G G F +++++ +GE D AVHS KD+PT+ +GL ++A R DV ++ L Sbjct: 57 GKTGAFVHSLDERVRAGEADAAVHSLKDVPTEDREGLTVAAVPERAPANDVLVTPDGTDL 116 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 DL + +GTSSLRR+A LL R D+ V RG ++TR+ KL Sbjct: 117 DDLPEGATVGTSSLRRRAQLLAERPDLDVQPLRGNVDTRVEKL 159 Score = 77.5 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 38/143 (26%), Positives = 55/143 (38%), Gaps = 2/143 (1%) Query: 165 KAHAILLAYAGIKRLK-KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223 + AI+LA AG+ RL + + L E F PSPGQG A+ + +I+ Sbjct: 221 EYDAIVLAEAGLDRLGLTHHLDFQALPDEQFVPSPGQGV-VAVVAEEGEAAEAIRDIIDD 279 Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283 T ER L L G C + I A +G + VLA DG R Sbjct: 280 ARTRVEATVERTILETLGGGCVAPIGVRAVFQGRVVTTTVRVLAPDGTEEIADRRALPVE 339 Query: 284 DAINIGRDAAQYIRFISNKNVFN 306 D ++ R+ + + V Sbjct: 340 DHVDAARELGEDLADRGADEVIE 362 >gi|307719295|ref|YP_003874827.1| porphyrin biosynthesis protein HemD [Spirochaeta thermophila DSM 6192] gi|306533020|gb|ADN02554.1| porphyrin biosynthesis protein HemD [Spirochaeta thermophila DSM 6192] Length = 672 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 72/232 (31%), Positives = 111/232 (47%), Gaps = 12/232 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLS--TKGDRITNRTLTEIGG 60 + R+GTR S LALA E + D + P+ +GDR L + G Sbjct: 1 MRVLRLGTRGSRLALAQVREWIARWRDASPEAG-EVEWEPMVLHPRGDRDKRTPLHLVEG 59 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIR-DVFISHTAQ--- 116 FT+ +++ L+ G ID A+HSAKD+P +L +GL ++A P E R DV + H Sbjct: 60 SDFFTDALDEALLEGRIDVALHSAKDLPDELREGLSLAAITPLEGPREDVLVLHPRWASA 119 Query: 117 -SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 S+ +L IGTSS RR+ L RSD ++D RG IE RL ++++ + +++A Sbjct: 120 SSVDELPAGLRIGTSSARRREQLSHLRSDWELVDIRGTIEERLARVSSGEIDGVVMAKVA 179 Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227 + RL E F P P QG + + + + L V++ W Sbjct: 180 LTRLALEVPHL----PLPFVPHPLQGRLAAVVREGDEEVRRLCAVLDDRGRW 227 >gi|293194091|ref|ZP_06609931.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Actinomyces odontolyticus F0309] gi|292819785|gb|EFF78795.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Actinomyces odontolyticus F0309] Length = 177 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 60/178 (33%), Positives = 91/178 (51%), Gaps = 5/178 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNI--VIIPLSTKGDRITNRTLTEI 58 M + F +GTR S LALA + ++ + + + + T GD ++ L + Sbjct: 1 MTTRTFVLGTRGSRLALAQSTTVARAIEEAGARLGEEVRVNLEVVRTHGD-VSAEPLAAL 59 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 GG G+F ++ L+ GE D AVHS KD+PT GL+I+A RED RD + +L Sbjct: 60 GGVGVFAAQLRLALLGGECDLAVHSFKDLPTAPTPGLRIAAVPQREDPRDALCAADGATL 119 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYA 174 L +++GT S RR A +L R D+ V D RG + TRL+++ + A A A Sbjct: 120 ASLPEGALVGTGSPRRAAQVLAARPDLFVCDLRGNVPTRLSRVRGLDLGADAGTAPSA 177 >gi|156101752|ref|XP_001616569.1| porphobilinogen deaminase [Plasmodium vivax SaI-1] gi|148805443|gb|EDL46842.1| porphobilinogen deaminase, putative [Plasmodium vivax] Length = 341 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 86/329 (26%), Positives = 145/329 (44%), Gaps = 69/329 (20%) Query: 47 GDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDI 106 GD I ++ + GGKG+FT+E++++LI + VHS KD+P +L + +Q+S +L R+ I Sbjct: 2 GDHILDKKVGLFGGKGIFTKELDEQLIKKNVHICVHSLKDVPMELPEHVQLSCFLKRDTI 61 Query: 107 RDVFISHTAQSLKDLALHSV---------------------------------------I 127 D F+S +L+D+ + I Sbjct: 62 NDAFLSVKYATLEDMNKRKMANKVEEESDQEKGTIQQMTNQGLKRDNCEGDKCTNFIPTI 121 Query: 128 GTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV--- 184 GTSSLRR + + +++V + RG I TR+ KL N + AI++A G++RL +KV Sbjct: 122 GTSSLRRSSQIKYTYKNVAVKNVRGNINTRIAKLCNGQYDAIIIAKCGLERLLTKKVVRN 181 Query: 185 ---------------------------IKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217 + +N P+ QG I + +H N+ + Sbjct: 182 IIRGKGKVPPEKFLLNHNDMETNLRLLRIQQINRRTIYPALCQGIIAVTSHKNDVDTSNI 241 Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVS 277 +K IN E N ER+FL +++G+C I G+A G + F ++ + G+ + V Sbjct: 242 LKNINDEKAQIMANVERSFLYQIEGNCMMPIGGYAQIVGGEIVFNAVINDTHGREKYHVR 301 Query: 278 RNGNRCDAINIGRDAAQYIRFISNKNVFN 306 G + NI AA ++ + FN Sbjct: 302 EVGTVQNCNNIAAMAATKMKEKIGTHRFN 330 >gi|55379657|ref|YP_137507.1| porphobilinogen deaminase [Haloarcula marismortui ATCC 43049] gi|55232382|gb|AAV47801.1| porphobilinogen deaminase [Haloarcula marismortui ATCC 43049] Length = 389 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 60/163 (36%), Positives = 92/163 (56%), Gaps = 6/163 (3%) Query: 1 MEKK--PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEI 58 M + ++ TR S LAL A R SL + ++ + T GD+I + + + Sbjct: 1 MTTRGETLQLATRGSDLALRQAATVRDSLSSRR----LAVELVEVETTGDQIRDELIHRL 56 Query: 59 GGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSL 118 G G F +++K++ GE+D AVHS KDMPT+ + L ++A R DV ++ +SL Sbjct: 57 GKTGAFVRSLDEKVLDGELDAAVHSMKDMPTERPERLVVAAVPERAAAEDVLVTPDGRSL 116 Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 ++L + +GTSSLRRKA LL R D++V RG ++TRL KL Sbjct: 117 EELPEGATVGTSSLRRKAQLLAERDDLTVEPLRGNVDTRLAKL 159 Score = 86.0 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 2/142 (1%) Query: 165 KAHAILLAYAGIKRLK-KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223 + AI+LA AG+ R V L+ + F P+PGQGA+ + T V+ A ++ ++ Sbjct: 226 EYDAIVLAKAGLHRAGLTRYVGMSDLDPDQFVPAPGQGALAV-TAVDGDLALDIKDRLDD 284 Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283 T ER L EL G C + I A +G ++ VL+ DG V R+ Sbjct: 285 PQTRIETTVERTILEELGGGCVAPIGVHAQLEGGVVHTRVRVLSQDGTEEVSVGRDVPAE 344 Query: 284 DAINIGRDAAQYIRFISNKNVF 305 I +D A + ++ Sbjct: 345 YHIESAQDLAAELAEQGADDLI 366 >gi|46445906|ref|YP_007271.1| porphobilinogen deaminase [Candidatus Protochlamydia amoebophila UWE25] gi|46399547|emb|CAF22996.1| putative Porphobilinogen deaminase [Candidatus Protochlamydia amoebophila UWE25] Length = 233 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 5/217 (2%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 +G R SPL+ A E +L + P I T GD +L ++ FT Sbjct: 18 ISVGARSSPLSRAQVQEILKALRSFY--PSIEFTISYFDTIGDLDQKTSLRDLDKTNFFT 75 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 +EI++ ++ + +HSAKD+P + GLQ+ D DV + ++L+ L HS Sbjct: 76 KEIDEAILQKKCQIGIHSAKDLPDPIPDGLQLICLTKGVDCSDVLVLRDGETLQTLPPHS 135 Query: 126 VIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 I TSS+RR+ ++ R+D +D RG I RL L +A +++A A + RL + Sbjct: 136 RIATSSIRRENIVKLLRNDFIFLDLRGTIHQRLALLEKKQADGVVVAEAALIRLGLTHLN 195 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 + L GQG + I ++ K Q L ++ Sbjct: 196 RIRLPGTTV---EGQGQLAIIARKDDAKMQTLFACLD 229 >gi|149041456|gb|EDL95297.1| hydroxymethylbilane synthase, isoform CRA_c [Rattus norvegicus] Length = 208 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 43/113 (38%), Positives = 59/113 (52%), Gaps = 2/113 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + R+GTR S LA + L ++ P II +ST GD+I + L++IG K Sbjct: 17 MMRVIRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEK 74 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT 114 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H Sbjct: 75 SLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHP 127 >gi|149041455|gb|EDL95296.1| hydroxymethylbilane synthase, isoform CRA_b [Rattus norvegicus] Length = 192 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 43/113 (38%), Positives = 59/113 (52%), Gaps = 2/113 (1%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + R+GTR S LA + L ++ P II +ST GD+I + L++IG K Sbjct: 1 MMRVIRVGTRKSQLARIQTDTVVAMLKTLY--PGIQFEIIAMSTTGDKILDTALSKIGEK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT 114 LFT+E+E L E+D VHS KD+PT L G I A RE+ D + H Sbjct: 59 SLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHP 111 >gi|297170589|gb|ADI21615.1| porphobilinogen deaminase [uncultured myxobacterium HF0130_06F04] Length = 197 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 8/196 (4%) Query: 116 QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAG 175 L L + +GTSSLRRKA LL R D+ ++D RG + TR NK + + A++LA AG Sbjct: 4 NQLWGLKEKARVGTSSLRRKAHLLSKRPDLVMVDIRGNVPTRFNKAVSGELDAVILAEAG 63 Query: 176 IKRLKKEKVIKEI------LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 + RL+ K + +++ P+P QGA+ I+T ++ +A +K ++H T Sbjct: 64 LTRLEMGKQAENQGVRLVPIDVASVCPAPAQGALAIQTRSDDERAHAALKALHHPGTAAC 123 Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 V ER L E G C + + +V + DG E G + Sbjct: 124 VEVERLLLGEFGGGCHLPLGAHCTVENGEYTLVALVASPDGGERFEARSTG--NHPNEVA 181 Query: 290 RDAAQYIRFISNKNVF 305 + + Sbjct: 182 KQVHLELVRQGADAYL 197 >gi|322694171|gb|EFY86008.1| porphobilinogen deaminase Hem3, putative [Metarhizium acridum CQMa 102] Length = 654 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 14/220 (6%) Query: 100 YLPREDIRDVFISHT---AQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIET 156 R+D RD + SL+ L +V+GTSS+R A L R + + RG ++T Sbjct: 117 IPLRDDPRDALVVKAGLAYTSLQTLPPGAVVGTSSVRHSAQLRRLYPHLRFSNLRGNVDT 176 Query: 157 RLNKLNNNKAH--AILLAYAGIKRLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNP 212 RL K+ + ++ ++++ AG++R+ + I + L +D + GQGA+ +E + Sbjct: 177 RLAKVEDPESEYTCMIMSAAGLERVGLKSRISQYLGSKDGGILHAVGQGALGLEIRKGDS 236 Query: 213 KAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST----LYFYGIVLAS 268 K + V + + + ERA L L+G C I G + L IV++ Sbjct: 237 KTLQFVNQLGDRKSTLASLAERALLRALEGGCSVPIGVETEWIGQSEHQVLRMKAIVVSL 296 Query: 269 DGKIFHEVSRNG---NRCDAINIGRDAAQYIRFISNKNVF 305 DG E S + A +GRD A + + + Sbjct: 297 DGTECVERSIDAMLLTNDQASQLGRDLAARLIDGGAEKIL 336 >gi|212550635|ref|YP_002308952.1| hydroxymethylbilane synthase/uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548873|dbj|BAG83541.1| hydroxymethylbilane synthase/uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 682 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 20/229 (8%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG- 60 K R+ +R SPL+L E P + +I + + GD+ + L +I Sbjct: 7 SKGNLRVISRNSPLSLLQVKEV------FSFFPNIDYQLITIESFGDKNKHVALFDISNV 60 Query: 61 ----------KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF 110 FT E+++ LI + D AVHSAKD+P L L++ A D D Sbjct: 61 SSFFLEEESISDFFTRELDEALIYNKADIAVHSAKDLPYPLPYDLELFALFQAMDKSDSL 120 Query: 111 ISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAIL 170 IS +L+ L + +GTSS +RK LL+ R D+ V+ RG IE R+ K++N A++ Sbjct: 121 ISRNNLTLEQLPPRARVGTSSQKRKTELLKIRPDLEVVSIRGNIEERIAKMDNGFIDALI 180 Query: 171 LAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219 +A + RL E I IL E QG + I N+ + L Sbjct: 181 VATCALIRLGMEARIACILPFE---THSLQGNLAIVGRKNDKNVKNLFC 226 >gi|238488537|ref|XP_002375506.1| porphobilinogen deaminase, putative [Aspergillus flavus NRRL3357] gi|220697894|gb|EED54234.1| porphobilinogen deaminase, putative [Aspergillus flavus NRRL3357] Length = 230 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 59/228 (25%), Positives = 103/228 (45%), Gaps = 16/228 (7%) Query: 87 MPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDIS 146 MPT L +++A PR+D RD I L SL A+L R + Sbjct: 1 MPTSLPDSCELAAIPPRDDPRDALIVKAGLPYTSLK--------SLPEGAVLRRLYPHLR 52 Query: 147 VIDFRGKIETRLNKLNNNKAH--AILLAYAGIKRLKKEKVIKEILNIED--FPPSPGQGA 202 + RG +ETRL K++N+ + ++++ AG++R+ E I + L +D + GQGA Sbjct: 53 FANLRGNVETRLAKVDNSDSEYTCMVMSAAGLERVGLEHRISQYLGSKDGGILHAVGQGA 112 Query: 203 ICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA-YCKGSTLYF 261 + +E + K QEL+ + + + + ER+ + L+G C + I + L Sbjct: 113 LGLEIRKGDRKMQELLGQLADQRSTLACLAERSLMRTLEGGCSAPIGVETEWISAGALSI 172 Query: 262 YGIVLASDGKIFHEVSRNGNR---CDAINIGRDAAQYIRFISNKNVFN 306 + IV++ DG E + N +A +G++ A + V N Sbjct: 173 HAIVVSLDGTKSVEDTIVSNVKTVEEATALGKELAARLVKAGAGEVLN 220 >gi|62999515|gb|AAY25186.1| putative porphobilinogen deaminase [Streptomyces nodosus subsp. asukaensis] Length = 167 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 57/160 (35%), Positives = 88/160 (55%), Gaps = 8/160 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKG 62 KP R+GTR S LA+A + ++ +V + ++ ++T GD I+ L +IGG G Sbjct: 12 DKPLRLGTRRSKLAMAQSGMVADAVSEVT---GRAVELVEVTTYGD-ISREHLAQIGGTG 67 Query: 63 LFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLA 122 +F + L+ GE+D AVHS KD+PT +GL ++A RED RDV ++ + + L Sbjct: 68 VFVAALRDALLRGEVDFAVHSLKDLPTAQPEGLVLAAVPVREDPRDVLVARDGLTFEQLP 127 Query: 123 LHSVIGTSSLRRKALLLRWRS----DISVIDFRGKIETRL 158 + IGT S RR A L + DI + RG ++TR+ Sbjct: 128 SGARIGTGSPRRMAQLNAYARNHGLDIETVPIRGNVDTRI 167 >gi|255348660|ref|ZP_05380667.1| porphobilinogen deaminase [Chlamydia trachomatis 70] gi|255503200|ref|ZP_05381590.1| porphobilinogen deaminase [Chlamydia trachomatis 70s] gi|296434889|gb|ADH17067.1| porphobilinogen deaminase [Chlamydia trachomatis E/150] gi|296438609|gb|ADH20762.1| porphobilinogen deaminase [Chlamydia trachomatis E/11023] Length = 241 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 90/206 (43%), Gaps = 7/206 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+ +R S LA+ A E L P II +T+GD L + G F Sbjct: 20 PLRLASRQSSLAVLQAHECLRKLQ--IFFPRLWGQIITTTTQGDLDQETPLCAVENTGFF 77 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T++++ + SG+ D +HSAKD+ + + D RD+ + H L Sbjct: 78 TDDVDFLVQSGQCDLGIHSAKDL--PENPKATVISITASIDPRDILVFHEKYLSIPLPRR 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IG+SS+RRK LL + D RG I+TRL L AI++A A + RL Sbjct: 136 LRIGSSSVRRKELLSLLYPSAIITDIRGTIQTRLKLLEEKNFDAIVMANAAVSRLGLRLP 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVN 210 +IL P P QG + I + Sbjct: 196 CTKILPP---PYHPLQGRLAITASRH 218 >gi|297521378|ref|ZP_06939764.1| porphobilinogen deaminase [Escherichia coli OP50] Length = 92 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 2/93 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLK 93 KGLF +E+E L+ D AVHS KD+P + + Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEFPQ 91 >gi|15605020|ref|NP_219804.1| porphobilinogen deaminase [Chlamydia trachomatis D/UW-3/CX] gi|76789021|ref|YP_328107.1| porphobilinogen deaminase [Chlamydia trachomatis A/HAR-13] gi|255311101|ref|ZP_05353671.1| porphobilinogen deaminase [Chlamydia trachomatis 6276] gi|255317402|ref|ZP_05358648.1| porphobilinogen deaminase [Chlamydia trachomatis 6276s] gi|255506878|ref|ZP_05382517.1| porphobilinogen deaminase [Chlamydia trachomatis D(s)2923] gi|301335770|ref|ZP_07224014.1| porphobilinogen deaminase [Chlamydia trachomatis L2tet1] gi|11386778|sp|O84301|HEM3_CHLTR RecName: Full=Probable porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|3328714|gb|AAC67892.1| Porphobilinogen Deaminase [Chlamydia trachomatis D/UW-3/CX] gi|76167551|gb|AAX50559.1| porphobilinogen deaminase [Chlamydia trachomatis A/HAR-13] gi|296435816|gb|ADH17990.1| porphobilinogen deaminase [Chlamydia trachomatis G/9768] gi|296436741|gb|ADH18911.1| porphobilinogen deaminase [Chlamydia trachomatis G/11222] gi|296437676|gb|ADH19837.1| porphobilinogen deaminase [Chlamydia trachomatis G/11074] gi|297140175|gb|ADH96933.1| porphobilinogen deaminase [Chlamydia trachomatis G/9301] gi|297748428|gb|ADI50974.1| Porphobilinogen deaminase [Chlamydia trachomatis D-EC] gi|297749308|gb|ADI51986.1| Porphobilinogen deaminase [Chlamydia trachomatis D-LC] Length = 241 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 90/206 (43%), Gaps = 7/206 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P R+ +R S LA+ A E L P II +T+GD L + G F Sbjct: 20 PLRLASRQSSLAVLQAHECLRKLQ--IFFPRLWGQIITTTTQGDLDQETPLCAVENTGFF 77 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T++++ + SG+ D +HSAKD+ + + D RD+ + H L Sbjct: 78 TDDVDFLVQSGQCDLGIHSAKDL--PENPKATVVSITASIDPRDILVFHEKYLSIPLPRR 135 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 IG+SS+RRK LL + D RG I+TRL L AI++A A + RL Sbjct: 136 LRIGSSSVRRKELLSLLYPSAIITDIRGTIQTRLKLLEEKNFDAIVMANAAVSRLGLRLP 195 Query: 185 IKEILNIEDFPPSPGQGAICIETHVN 210 +IL P P QG + I + Sbjct: 196 CTKILPP---PYHPLQGRLAITASRH 218 >gi|322782664|gb|EFZ10527.1| hypothetical protein SINV_04722 [Solenopsis invicta] Length = 331 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 64/216 (29%), Positives = 101/216 (46%), Gaps = 6/216 (2%) Query: 72 LISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDLALHSVIG 128 L + + A+ + RED RD + ++L L SVIG Sbjct: 14 LCCAYVMLCISCARPLKAC-SLFYNSINTKLREDPRDAVVMSKKFKDKTLSSLPKGSVIG 72 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIKRLKKEKVIK 186 TSSLRR A L R + + + RG + TRL KL+ N AI+LA AG+KR+ E I Sbjct: 73 TSSLRRSAQLSRNMPHLKIENIRGNLNTRLKKLDDENGPYAAIILAAAGLKRMGWEDRIS 132 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 ++L E+ + GQGA+ +E ++ + + L++ + +T CER+FL L G C + Sbjct: 133 QLLEPEEALYAVGQGALGVECRQSDWEIRSLLEPLFDLETTLRCVCERSFLKTLGGGCSA 192 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNR 282 +A + K + L G V + DG+ + Sbjct: 193 PVAVSSSLKENELTITGAVWSLDGQTLITDTIKKKL 228 >gi|41186|emb|CAA47279.1| hydroxymethylbilane synthase [Escherichia coli K-12] Length = 89 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 2/91 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + LM H P + ++P+ T+GD I + L ++GG Sbjct: 1 MLDNVLRIATRQSPLALWQAHYVKDKLMASH--PGLVVELVPMVTRGDVILDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91 KGLF +E+E L+ D AVHS KD+P + Sbjct: 59 KGLFVKELEVALLENRADIAVHSMKDVPVEF 89 >gi|3172401|gb|AAC18584.1| porphobilinogen deaminase [Lysinibacillus sphaericus] Length = 109 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 47/108 (43%), Positives = 61/108 (56%), Gaps = 2/108 (1%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGL 63 + +G+R S LAL + L P + + TKGD+I + L+++GGKGL Sbjct: 3 RKIIVGSRRSKLALTQTNWFINELKAAGV--PFEFEVKEIVTKGDQILDVQLSKVGGKGL 60 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFI 111 F +EIE+ L EID AVHS KDMP L +GL I PRED RD FI Sbjct: 61 FVKEIEQALFDKEIDFAVHSMKDMPAVLPEGLVIGCIPPREDARDAFI 108 >gi|154762311|gb|ABS86004.1| porphobilinogen deaminase [Cervus elaphus] gi|155494266|gb|ABS86002.2| porphobilinogen deaminase [Cervus elaphus] gi|155494267|gb|ABS86003.2| porphobilinogen deaminase [Cervus elaphus] gi|155494268|gb|ABS86005.2| porphobilinogen deaminase [Cervus elaphus] gi|155494269|gb|ABS86006.2| porphobilinogen deaminase [Cervus elaphus] gi|155494270|gb|ABS86007.2| porphobilinogen deaminase [Cervus elaphus] gi|155494271|gb|ABS86008.2| porphobilinogen deaminase [Cervus elaphus canadensis] gi|155494272|gb|ABS86009.2| porphobilinogen deaminase [Cervus elaphus canadensis] gi|155494273|gb|ABS86010.2| porphobilinogen deaminase [Cervus elaphus canadensis] gi|155494274|gb|ABS86011.2| porphobilinogen deaminase [Cervus elaphus canadensis] Length = 195 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 30/186 (16%) Query: 151 RGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209 RG + TRL KL+ + AI+LA AG++R+ + + +IL+ E+ + GQGA+ +E Sbjct: 1 RGNLNTRLQKLDELQEFSAIILAAAGLQRMGWQNRVGQILHPEECMYAVGQGALGVEVRA 60 Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269 + +LV V++ +T ER+FL L+G C +A K LY G V + + Sbjct: 61 KDQDILDLVGVLHDPETLLRCIAERSFLRHLEGGCSVPVAVHTTIKDGQLYLTGGVWSLN 120 Query: 270 GKIFHEVSR-----------NGNRCD------------------AINIGRDAAQYIRFIS 300 G + + +G D A N+G A + Sbjct: 121 GAETMQDTMQTTIHVPVQHEDGPEDDPQLVGITARNIPRQPQLAAENLGISLATLLLNKG 180 Query: 301 NKNVFN 306 KN+ + Sbjct: 181 AKNILD 186 >gi|330444348|ref|YP_004377334.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain-containing protein [Chlamydophila pecorum E58] gi|328807458|gb|AEB41631.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Chlamydophila pecorum E58] Length = 237 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 7/219 (3%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P +I +R S LA A E L P ++I T+GDR L I F Sbjct: 19 PLKIASRDSNLAKAQVNECLQLLR--TSYPKLQSLLITTKTQGDRDKLTPLHTIENSDFF 76 Query: 65 TEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALH 124 T +++ + G A+HSAKD+PT L + A D+ + + + + Sbjct: 77 TRDVDALVCQGSCHIAIHSAKDLPTP--SPLPLVALTRCLHPADLLVYADHYTKEPFPSN 134 Query: 125 SVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV 184 +G+SS+RR +L + +++ RG IE RL +L+NN A++LA A RL + Sbjct: 135 PRLGSSSMRRGEVLKQLFPLGQILNIRGTIEERLQQLHNNTYDAVVLAKAAALRLGLSFL 194 Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223 E+L P P QG + + + + + + I+ Sbjct: 195 YSELLPP---PYHPLQGRLALTAYESIDLWRTFLSPIHD 230 >gi|295670329|ref|XP_002795712.1| porphobilinogen deaminase [Paracoccidioides brasiliensis Pb01] gi|226284797|gb|EEH40363.1| porphobilinogen deaminase [Paracoccidioides brasiliensis Pb01] Length = 216 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 14/201 (6%) Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN--NNKAHAILLAYAGIK 177 +L SV+GTSS+RR A L R + D RG IETRL KL+ + I+LA AG+ Sbjct: 5 ELPAGSVVGTSSVRRIAQLSRHYPHLKPQDIRGNIETRLAKLDAEDGPFTCIILAAAGLL 64 Query: 178 RLKKEKVIKEILNIED--FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 R + I L+ ++ + GQGA+ +E ++ + + +++ I + ER+ Sbjct: 65 RSGQGARISHFLDSKNGKMLHAVGQGALGVEIRADDERMRAMIEKIGDRRATFACLAERS 124 Query: 236 FLAELDGSCKSAIAGFAYCKG-------STLYFYGIVLASDGKIFHEVSRNGNRC---DA 285 L L+G C + + L IV + DGK E +A Sbjct: 125 LLRALEGGCSAPLGVETEWVKGEGEGEVDKLRLRAIVASVDGKEAVEAEMEAEIRSEVEA 184 Query: 286 INIGRDAAQYIRFISNKNVFN 306 G+ A+ + + Sbjct: 185 EGFGKTVAEELIVKGAGKILE 205 >gi|154762327|gb|ABS86012.1| porphobilinogen deaminase [Capra hircus] gi|154762329|gb|ABS86013.1| porphobilinogen deaminase [Capra hircus] Length = 195 Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 30/186 (16%) Query: 151 RGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV 209 RG + TRL KL+ + AI+LA AG++R+ + + +IL+ E+ + GQGA+ +E Sbjct: 1 RGNLNTRLRKLDELQEFSAIILAAAGLQRMGWQNRVGQILHPEECMYAVGQGALGVEVRA 60 Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269 + +LV V++ +T ER+FL L+G C +A K LY G V + + Sbjct: 61 KDQDILDLVGVLHDPETLLRCIAERSFLRHLEGGCSVPVAVHTAIKDGQLYLTGGVWSLN 120 Query: 270 GKIFHEVSR-----------NGNRCD------------------AINIGRDAAQYIRFIS 300 G + + +G D A N+G A + Sbjct: 121 GAETMQDTMQTTIHVPVQHEDGPEDDPQLVGITARNIPRQPQLAAENLGISLATLLLNKG 180 Query: 301 NKNVFN 306 KN+ + Sbjct: 181 AKNILD 186 >gi|25010019|gb|AAN71175.1| GH12864p [Drosophila melanogaster] Length = 558 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 19/219 (8%) Query: 99 AYLPREDIRDVFISHTAQSLKDL---ALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIE 155 A L RED RD + + SVIGTSSLRR A + R ++V D RG + Sbjct: 5 AVLEREDARDALVLRENFKGHTIASLPKGSVIGTSSLRRTAQIRRMYPHLTVCDIRGNLN 64 Query: 156 TRLNKLN--NNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK 213 TRL KL+ ++K I+LA AG+ R+ I ++L D + GQGA+ +E N+ + Sbjct: 65 TRLAKLDAADSKFSGIILAQAGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDDQ 124 Query: 214 AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGS---------TLYFYGI 264 +++ + +T + ER+FL L G C + +A ++ KG L G Sbjct: 125 VLAMLQKLMCLNTTCRILAERSFLKTLGGGCSAPVAVWSNLKGEPLNGNSQEVGLSLTGA 184 Query: 265 VLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 V + DG I + G R + Sbjct: 185 VWSLDGAIEIRNHLACALNEQKLEGDQ-----RKRGAQE 218 >gi|282892112|ref|ZP_06300587.1| hypothetical protein pah_c207o043 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498007|gb|EFB40351.1| hypothetical protein pah_c207o043 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 221 Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 9/216 (4%) Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPL--STKGDRITNRTLTEIGGKGLFTE 66 R SPL+ A E + +L H + I +IP+ +T GD+ +L + FT+ Sbjct: 2 AARESPLSKAQVLEVQQALHPHHPM----IELIPVWVATTGDKQQEISLRNMEKTDFFTK 57 Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 E++ L+SG+ D AVHSAKD+P L +GL + A D RDV + SL L ++ Sbjct: 58 ELDALLLSGQCDVAVHSAKDLPDPLPQGLSLIALTEGVDNRDVLVIREGLSLAALPQAAM 117 Query: 127 IGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIK 186 I TSS RR+ R+D +D RG I RL+ L A I++A A + RL + + Sbjct: 118 IATSSERREQQARMLRTDFRFMDLRGTIGQRLSLLEAGVADGIIVAEAALIRLGLCHLNR 177 Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 L E +P QG + I + + +E+ ++ Sbjct: 178 VYLPGE---TAPMQGRLAILAKTEHVEMREIFACLD 210 >gi|294885317|ref|XP_002771270.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983] gi|239874766|gb|EER03086.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983] Length = 556 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 68/297 (22%), Positives = 110/297 (37%), Gaps = 42/297 (14%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LA L D + GD L ++ G+FT Sbjct: 10 LHIGSRRSDLARLQTLMIADLLQDEM---GVKVECHYREAPGDTNLKDPLWKMPETGVFT 66 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + L++G D VHS KD+P G + A LPR D RD+ + + + Sbjct: 67 SFLRDGLMNGAFDLVVHSWKDLPLAEESGTTVVATLPRADPRDLLLIRRDAIEEMTSEGG 126 Query: 126 V--IGTSSLRRKALLLRW-------RSDISVIDFRGKIETRLNKLNN---------NKAH 167 + +SS RR+ L + + + D RG I+TR+ KL + + H Sbjct: 127 KLIVLSSSPRRQFNLTPFLESVVPGVTSVQFRDVRGNIQTRMKKLMDPTIHDESLGCRPH 186 Query: 168 AILLAYAGIKRLKKEKV-----------------IKEILNIEDFPPSPGQGAICIETHVN 210 +++A A + R + +L + P + QGA+ IE Sbjct: 187 GLVVAKAAVDRFIRSTREEFKESRQLVQGYISECRCMVLPLSANPTAAAQGALGIEVSTA 246 Query: 211 NPKAQ--ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAG--FAYCKGSTLYFYG 263 K ++V+ +N T+D+ + E+ L G C I G L+ G Sbjct: 247 PEKEHVRKIVRSLNDRSTFDAASKEKELLNSYGGGCHQKIGCTILPRQYGDVLFLCG 303 >gi|110669321|ref|YP_659132.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Haloquadratum walsbyi DSM 16790] gi|109627068|emb|CAJ53547.1| hydroxymethylbilane synthase (porphobilinogen deaminase) [Haloquadratum walsbyi DSM 16790] Length = 394 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 61/168 (36%), Positives = 89/168 (52%), Gaps = 11/168 (6%) Query: 1 MEKK-----PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTL 55 M + + TR S LAL A + +L D + + +I + T+GD+I + + Sbjct: 1 MTTRSRTRGTLTLATRGSDLALKQATSVQEALTDER----YEVDLIEVETRGDQIQDELI 56 Query: 56 TEIGGKGLFTEEIEKKLIS--GEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISH 113 ++G G F ++KK++ E D AVHS KDMPT L ++ R D+ I+ Sbjct: 57 HQLGKTGAFVRALDKKVLDPTAEADAAVHSMKDMPTDSPDDLVVAGIPQRAPPGDLLITT 116 Query: 114 TAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL 161 Q L DL + IGTSSLRR+A LL R+DI+V RG I+TR+ KL Sbjct: 117 DGQRLSDLPSGATIGTSSLRRQAQLLDQRTDITVEPLRGNIDTRIEKL 164 Score = 76.3 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 1/142 (0%) Query: 165 KAHAILLAYAGIKRLK-KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223 + AI+LA AG++R + L+ F P+PGQGAI I T ++ + I+H Sbjct: 235 EYDAIVLAEAGLQRSGLIHHIEYVQLDTTTFVPAPGQGAIAITTQGEANATAQIREAIDH 294 Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283 T ER LAEL G C + I A +G ++ V ASDG + SRN Sbjct: 295 PRTRVETTVERTVLAELGGGCIAPIGVHATLQGEYVHVAAQVFASDGTETVDGSRNLPVD 354 Query: 284 DAINIGRDAAQYIRFISNKNVF 305 + A + + Sbjct: 355 AHADAAAQFANKLADRGADELI 376 >gi|297170259|gb|ADI21296.1| porphobilinogen deaminase [uncultured gamma proteobacterium HF0010_09F21] Length = 282 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 68/283 (24%), Positives = 113/283 (39%), Gaps = 22/283 (7%) Query: 36 HNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGL 95 + VI + TKGD+ + + T+ K F ++IE+K+ SG+ID AVHSAKD+P K Sbjct: 7 EDYVIEKIVTKGDKESAKGRTQF-DKLNFVQDIEEKISSGDIDIAVHSAKDLPATESKEF 65 Query: 96 QISAYLPREDIRDVF----ISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFR 151 + + I ++ K + ++GTSSLRRK + Sbjct: 66 DYFYLRESTEDISTWSSDRIIFRDKNKKKFSSEMILGTSSLRRKMQAKFLLGAEKIFSLN 125 Query: 152 GKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIET---H 208 G I+TR+ KLN+ + I+LA AG RL + DF QG IC++ Sbjct: 126 GNIDTRIRKLNSGEYDCIILANAGCTRLGFNLNSYNL----DFLTPSAQGLICLQCLKGT 181 Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA----YCKGSTLYFYGI 264 + ++ ++ ++FL ++ C SAI+ + Sbjct: 182 DISKMLNNFFDKDKYKIHKLGMDIYKSFLRNINADCNSAISVRSVGNGRIANGEHKLTFQ 241 Query: 265 VLASDGK-IFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 V GK F + D + A + + K + + Sbjct: 242 VF---GKNEFFSAEKT--HSDPQKLIELATEEFNRNNAKKLLD 279 >gi|289525338|emb|CBJ14814.1| porphobilinogen deaminase [Chlamydia trachomatis Sweden2] Length = 219 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 87/202 (43%), Gaps = 7/202 (3%) Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 +R S LA+ A E L P II +T+GD L + G FT+++ Sbjct: 2 ASRQSSLAVLQAHECLRKLQ--IFFPRLWGQIITTTTQGDLDQETPLCAVENTGFFTDDV 59 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128 + + SG+ D +HSAKD+ + + D RD+ + H L IG Sbjct: 60 DFLVQSGQCDLGIHSAKDL--PENPKATVISITASIDPRDILVFHEKYLSIPLPRRLRIG 117 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188 +SS+RRK LL + D RG I+TRL L AI++A A + RL +I Sbjct: 118 SSSVRRKELLSLLYPSAIITDIRGTIQTRLKLLEEKNFDAIVMANAAVSRLGLRLPCTKI 177 Query: 189 LNIEDFPPSPGQGAICIETHVN 210 L P P QG + I + Sbjct: 178 LPP---PYHPLQGRLAITASRH 196 >gi|166154510|ref|YP_001654628.1| porphobilinogen deaminase [Chlamydia trachomatis 434/Bu] gi|166155385|ref|YP_001653640.1| porphobilinogen deaminase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|237802722|ref|YP_002887916.1| porphobilinogen deaminase [Chlamydia trachomatis B/Jali20/OT] gi|237804644|ref|YP_002888798.1| porphobilinogen deaminase [Chlamydia trachomatis B/TZ1A828/OT] gi|165930498|emb|CAP03991.1| porphobilinogen deaminase [Chlamydia trachomatis 434/Bu] gi|165931373|emb|CAP06945.1| porphobilinogen deaminase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|231272944|emb|CAX09855.1| porphobilinogen deaminase [Chlamydia trachomatis B/TZ1A828/OT] gi|231273956|emb|CAX10748.1| porphobilinogen deaminase [Chlamydia trachomatis B/Jali20/OT] Length = 219 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 87/202 (43%), Gaps = 7/202 (3%) Query: 9 GTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 +R S LA+ A E L P II +T+GD L + G FT+++ Sbjct: 2 ASRQSSLAVLQAHECLRKLQ--IFFPRLWGQIITTTTQGDLDQETPLCAVENTGFFTDDV 59 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128 + + SG+ D +HSAKD+ + + D RD+ + H L IG Sbjct: 60 DFLVQSGQCDLGIHSAKDL--PENPKATVVSITASIDPRDILVFHEKYLSIPLPRRLRIG 117 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188 +SS+RRK LL + D RG I+TRL L AI++A A + RL +I Sbjct: 118 SSSVRRKELLSLLYPSAIITDIRGTIQTRLKLLEEKNFDAIVMANAAVSRLGLRLPCTKI 177 Query: 189 LNIEDFPPSPGQGAICIETHVN 210 L P P QG + I + Sbjct: 178 LPP---PYHPLQGRLAITASRH 196 >gi|218513448|ref|ZP_03510288.1| porphobilinogen deaminase [Rhizobium etli 8C-3] Length = 137 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 63/137 (45%), Positives = 94/137 (68%) Query: 156 TRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQ 215 TRL KL + A LLA AG+KRL K +V+ +IL+ + FPP+P QGAICIE+ + + + Sbjct: 1 TRLRKLEEGQVDATLLALAGLKRLGKVEVLTDILDPDTFPPAPAQGAICIESRIGDSRID 60 Query: 216 ELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHE 275 +L+ +N T+D+V+CERAFLA LDGSC++ I G+A C+G + F G+++ DG+ H Sbjct: 61 DLLAAVNDAATFDTVSCERAFLAALDGSCRTPIGGYAVCEGDLIRFSGLIITPDGRSQHA 120 Query: 276 VSRNGNRCDAINIGRDA 292 V+ +G+R DA +G A Sbjct: 121 VTTDGHRRDAAALGTRA 137 >gi|262277145|ref|ZP_06054938.1| Putative porphobilinogen deaminase (pbg)(hydroxymethylbilane synthase) (hmbs) (pre-uroporphyrinogen synthase) [alpha proteobacterium HIMB114] gi|262224248|gb|EEY74707.1| Putative porphobilinogen deaminase (pbg)(hydroxymethylbilane synthase) (hmbs) (pre-uroporphyrinogen synthase) [alpha proteobacterium HIMB114] Length = 492 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 83/293 (28%), Positives = 120/293 (40%), Gaps = 31/293 (10%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFT 65 IG+R S LA F + L K STKGD+ + G G+FT Sbjct: 5 LIIGSRASFLAKIQTFIVKQELKKKIKNIKITTKYH--STKGDKNQGHMPWKNLGYGIFT 62 Query: 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHS 125 + +LI+ +C VHS KD+P K + R+D RDV + Sbjct: 63 TSLTNELINKNFNCVVHSYKDLPVLKSKTDYY--VITRDDPRDV---LLVKKKCLNKKKF 117 Query: 126 VIGTSSLRRKALLLRWRS-----DISVIDFRGKIETRLNKL-NNNKAHAILLAYAGIKRL 179 ++GTSS RRK+ + + DI RG + TRL K+ + N+ A+ +A A I R+ Sbjct: 118 IVGTSSPRRKSSVKDLKDLTGIKDIKTKTIRGNVTTRLLKVISKNQYDAVFMAKAAIDRI 177 Query: 180 K-----------------KEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVIN 222 +K IL + FP + QGAI +E N+ K + + IN Sbjct: 178 FKYGNKVDKVETKKFLNLFKKFKPFILPLSIFPTAASQGAIAVEYLKNDKKTKSTLNKIN 237 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAG-FAYCKGSTLYFYGIVLASDGKIFH 274 + T N ER+ L + G C I K + F V A + K FH Sbjct: 238 CKKTLSICNQERSLLKKYGGGCGLDIGITIEEIKNNNFLFSKGVDARNKKEFH 290 >gi|255030292|ref|ZP_05302243.1| porphobilinogen deaminase [Listeria monocytogenes LO28] Length = 84 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 2/86 (2%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 K+ +G+R S LAL + + L + + P + I + TKGDRI + TL+++GGK Sbjct: 1 MKRKIIVGSRRSKLALTQSNWVINKLKENY--PEFDFEIKEIVTKGDRILDVTLSKVGGK 58 Query: 62 GLFTEEIEKKLISGEIDCAVHSAKDM 87 GLF E+E+ L ID AVHS KD+ Sbjct: 59 GLFVSEVEQALSDEAIDFAVHSMKDV 84 >gi|260829671|ref|XP_002609785.1| hypothetical protein BRAFLDRAFT_280323 [Branchiostoma floridae] gi|229295147|gb|EEN65795.1| hypothetical protein BRAFLDRAFT_280323 [Branchiostoma floridae] Length = 140 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 5/131 (3%) Query: 17 LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGE 76 + +SL + + II +ST GD+I + L++IG K LFT+E+EK L G Sbjct: 1 MIQTNSVVASLKKLCD--DVDFEIISMSTTGDKILDTALSKIGEKSLFTKELEKALDDGR 58 Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGTSSLR 133 +D VHS KD+ + L + I A L RED D + H + L DL +SVIGTSS+R Sbjct: 59 VDFVVHSLKDLQSTLPPNMVIGAVLEREDPYDAVLMHPKHATKCLADLPENSVIGTSSVR 118 Query: 134 RKALLLRWRSD 144 R A L R Sbjct: 119 RVAQLKRKYPH 129 >gi|70933882|ref|XP_738249.1| porphobilinogen deaminase [Plasmodium chabaudi chabaudi] gi|56514312|emb|CAH88223.1| porphobilinogen deaminase, putative [Plasmodium chabaudi chabaudi] Length = 144 Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 46/122 (37%), Positives = 73/122 (59%), Gaps = 2/122 (1%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHK--IPPHNIVIIPLSTKGDRITNRTLTEIGG 60 K IGTR SPLA+ + + + L+ K N+++ P+ T GD+I ++T+ GG Sbjct: 23 NKEIIIGTRNSPLAIKQSEKVKKKLLTYFKKINQNINVILKPIKTTGDKILDKTVGSFGG 82 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKD 120 KG+FT+E++ +LI +D VHS KD+PT L + +S +L R+ I D F+S +SL D Sbjct: 83 KGIFTKELDDELIKNNVDICVHSLKDIPTVLPDNIHLSCFLKRDTINDAFLSIKYKSLHD 142 Query: 121 LA 122 + Sbjct: 143 IN 144 >gi|729693|sp|P40129|HEM3_ERWCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName: Full=Hydroxymethylbilane synthase; Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase gi|41671|emb|CAA44890.1| hemC [Erwinia chrysanthemi] Length = 89 Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 2/91 (2%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M RI TR SPLAL A + L H P + ++P+ T+G + + L ++GG Sbjct: 1 MVDTILRIATRQSPLALWQAHFVQQRLEACH--PGLRVELVPMVTRGXLLLDTPLAKVGG 58 Query: 61 KGLFTEEIEKKLISGEIDCAVHSAKDMPTKL 91 KGLF +E+E L+ D AVHS KD+P + Sbjct: 59 KGLFVKELELALLENRADIAVHSMKDVPVEF 89 >gi|225020272|ref|ZP_03709464.1| hypothetical protein CORMATOL_00275 [Corynebacterium matruchotii ATCC 33806] gi|224947016|gb|EEG28225.1| hypothetical protein CORMATOL_00275 [Corynebacterium matruchotii ATCC 33806] Length = 152 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 1/149 (0%) Query: 158 LNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQEL 217 + K+++ + A++LAYAG+ R+ + E+ + +F P+P QGA+ +E ++ Sbjct: 1 MAKVHDGELDAVVLAYAGLSRVHRADEATEVFDPLEFLPAPAQGALAVECRADDADTIAA 60 Query: 218 VKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-KGSTLYFYGIVLASDGKIFHEV 276 + I + + ER LA L+ C + +A +A + + + V+A DG Sbjct: 61 ITTIADSKAYACAHTERVVLARLEAGCTAPVAAYATVAADNIMTLHAAVIAMDGSATLRA 120 Query: 277 SRNGNRCDAINIGRDAAQYIRFISNKNVF 305 + G A N+G A+ + ++ Sbjct: 121 TAAGPIDTAENLGMTVARALLDDGASSLL 149 >gi|253787595|dbj|BAH84857.1| putative porphobilinogen deaminase [Cucumis sativus] Length = 188 Score = 98.7 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 86/185 (46%), Positives = 119/185 (64%), Gaps = 1/185 (0%) Query: 67 EIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSV 126 EI+ LI+G+ID AVHS KD+PT L + + LPRED+RD FIS +A S +L S+ Sbjct: 1 EIDDALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSAGSFAELPAGSI 60 Query: 127 IGTSSLRRKALL-LRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVI 185 IGT+SLRRK+ L R+ S + +FRG ++TRL KLN A LLA AG++RL + + Sbjct: 61 IGTASLRRKSQLLNRYPSLKVLENFRGNVQTRLRKLNEGVVQATLLALAGLRRLNMTENV 120 Query: 186 KEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCK 245 IL+I++ P+ QGAI I ++ + +NHE+T +V CERAFL LDGSC+ Sbjct: 121 TSILSIDEMLPAVAQGAIGIACRSDDDIMANYLASLNHEETRLAVVCERAFLETLDGSCR 180 Query: 246 SAIAG 250 + IAG Sbjct: 181 TPIAG 185 >gi|300726136|ref|ZP_07059593.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Prevotella bryantii B14] gi|299776606|gb|EFI73159.1| porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Prevotella bryantii B14] Length = 226 Score = 97.5 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 93/204 (45%), Gaps = 10/204 (4%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK-GL 63 P R+ R S L+ E + L I+ T GD+ + +L + Sbjct: 9 PIRVIARRSKLSQLQVAEVFNRLK------DIPYTIVFTDTFGDKRLDLSLLNGEAPDDM 62 Query: 64 FTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLAL 123 FT E++ L+ + D A+HSAKD+P L L++ A D D +S L DL Sbjct: 63 FTRELDWALLHDDADIAIHSAKDLPEHLHPDLEVIALYEAFDKTDALVSRDHIKLMDLPA 122 Query: 124 HSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEK 183 S +GTSS RK L R D+ ++ RG IE R+ ++ + K ++A +KRL E Sbjct: 123 GSTVGTSSPLRKKGLSELRPDLKIVGIRGCIEDRVAQVRDGKLDCAIVATCALKRLGMED 182 Query: 184 VIKEILNIEDFPPSPGQGAICIET 207 I EIL FP P QG + I Sbjct: 183 EITEILP---FPTHPMQGRLAITA 203 >gi|54310581|ref|YP_131601.1| hypothetical protein PBPRA3528 [Photobacterium profundum SS9] gi|46915024|emb|CAG21799.1| hypothetical protein PBPRA3528 [Photobacterium profundum SS9] Length = 104 Score = 97.1 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 42/98 (42%) Query: 209 VNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLAS 268 +++ + + L+ +NH +T + CERA L G C+ I ++ +G ++ +V Sbjct: 1 MDDQRVRALLAPLNHHETATRIFCERAMNNRLQGGCQVPIGSYSELQGDQIWLRALVGEP 60 Query: 269 DGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 DG G D +G A+ + K + + Sbjct: 61 DGSKMVRGEITGPAIDGEALGTQLAEQLLADGAKEILD 98 >gi|294637951|ref|ZP_06716219.1| porphobilinogen deaminase protein [Edwardsiella tarda ATCC 23685] gi|291088912|gb|EFE21473.1| porphobilinogen deaminase protein [Edwardsiella tarda ATCC 23685] Length = 94 Score = 96.4 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 38/87 (43%) Query: 220 VINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRN 279 +NHE T V+ ERA L+G C+ I +A G L+ +V DG + R Sbjct: 1 PLNHESTALRVSAERAMNMRLEGGCQVPIGSYAEIDGDQLWLRALVGRPDGSLIIRGERR 60 Query: 280 GNRCDAINIGRDAAQYIRFISNKNVFN 306 G A ++G D A + + + + Sbjct: 61 GPLHQAESMGIDLADELLARGARAILD 87 >gi|330937205|gb|EGH41226.1| porphobilinogen deaminase [Pseudomonas syringae pv. pisi str. 1704B] Length = 119 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 48/107 (44%) Query: 199 GQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST 258 GQGA+ IE + + L+ ++HEDT V ER+ L+G C+ IA +A +G Sbjct: 3 GQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHLNGGCQVPIACYAVLEGDD 62 Query: 259 LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 ++ G+V G + + A +G A+ + ++ Sbjct: 63 VWLRGLVGDPSGSVLLHADARAPQTSAQALGVQVAEALLEQGAADIL 109 >gi|327493887|gb|AEA86530.1| porphobilinogen deaminase [Euglena gracilis] Length = 210 Score = 93.7 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 76/179 (42%), Gaps = 12/179 (6%) Query: 140 RWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGIKRLKKEKVIKEI---LNIEDF 194 + D RG ++TRL KL + + A++LA +G++RL + E+ + F Sbjct: 1 HQFPHLLFKDVRGNVQTRLAKLEDPTHGYAALVLAVSGLERLALGHHVTEVLASTDRRWF 60 Query: 195 PPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC 254 + GQGA+ ++ + ++ ++H++T ERA + EL+G C + IA Sbjct: 61 GYAVGQGALTVQCREGDAGTLRYLQHLHHQETAQRCIAERALMRELEGGCHAPIAVETRT 120 Query: 255 KGS------TLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR-FISNKNVFN 306 L + + DG+ + +A +GR A+ IR + + Sbjct: 121 FTEPGQPEPQLCLTAALYSLDGRQCVQRRLCQPAVEAEALGRAVAKAIREADGAAAILD 179 >gi|315186776|gb|EFU20534.1| uroporphyrin-III C-methyltransferase [Spirochaeta thermophila DSM 6578] Length = 661 Score = 93.7 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 68/219 (31%), Positives = 103/219 (47%), Gaps = 10/219 (4%) Query: 15 LALAHAFETRSSLMDVHKIPP-HNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLI 73 LALA E + D + L +GDR L + G FT+ +++ L+ Sbjct: 2 LALAQVREWIARWRDASPEAGEVKWEPVVLHPRGDRDKRTPLHLVEGSDFFTDALDEALL 61 Query: 74 SGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIR-DVFISHTAQ----SLKDLALHSVIG 128 G ID A+HSAKD+P L +GL ++A P E R DV + H S+++L IG Sbjct: 62 VGRIDVALHSAKDLPDDLREGLSLAAITPLEGPREDVLVLHPRWASASSVEELPAGLRIG 121 Query: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188 TSS RR+ L RSD ++D RG IE RL ++++ + +++A + RL E Sbjct: 122 TSSARRREQLSHLRSDWELVDIRGTIEERLARVSSGEIDGVVMAALALTRLALEVPHL-- 179 Query: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTW 227 F P P QG + + +A L V++ W Sbjct: 180 --PLPFVPHPLQGRLAAVVREGDEEAHRLCDVLDDRGRW 216 >gi|260890849|ref|ZP_05902112.1| hydroxymethylbilane synthase [Leptotrichia hofstadii F0254] gi|260859402|gb|EEX73902.1| hydroxymethylbilane synthase [Leptotrichia hofstadii F0254] Length = 135 Score = 92.5 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 2/130 (1%) Query: 170 LLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDS 229 +LA AG+KR+ E I E + + F P+PGQG +CI+ N+ K L+K+IN ++ Sbjct: 1 MLAAAGLKRVGLENRITEYFDTDSFMPAPGQGILCIQCRENDNKILNLLKIINDDEVTIM 60 Query: 230 VNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIG 289 ER F DG C + I + +G+TL G+ +G + GNR + Sbjct: 61 CKAEREFSKIFDGGCHTPIGCSSVIEGNTLKLKGM-FNDNGTRIFK-EVEGNRENPKETA 118 Query: 290 RDAAQYIRFI 299 + A+ I+ Sbjct: 119 QKLAEEIKEE 128 >gi|313896589|ref|ZP_07830138.1| porphobilinogen deaminase C-terminal domain protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312974774|gb|EFR40240.1| porphobilinogen deaminase C-terminal domain protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 120 Score = 91.8 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 1/113 (0%) Query: 194 FPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAY 253 P+ GQGA+ IE ++ + + + D + ERAFL ++G C+ + +A Sbjct: 1 MLPAVGQGALAIECRADDAEICAAIGFMCDADMTAAAAAERAFLGRVEGGCQIPVGVYAE 60 Query: 254 C-KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 G LY ++ + DG +G A IG A+ + + + + Sbjct: 61 IGDGDMLYVDAMIASVDGMRVCRSRASGRPAQAAQIGVALAEELLDMGGREIL 113 >gi|213623045|ref|ZP_03375828.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 88 Score = 91.4 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 31/78 (39%) Query: 228 DSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAIN 287 V ERA L+G C+ I +A ++ +V A DG + R G+ A Sbjct: 1 MRVTAERAMNTRLEGGCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQ 60 Query: 288 IGRDAAQYIRFISNKNVF 305 +G A+ + + + Sbjct: 61 MGISLAEELLENGARAIL 78 >gi|62319114|dbj|BAD94270.1| hydroxymethylbilane synthase [Arabidopsis thaliana] Length = 130 Score = 91.0 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 3/119 (2%) Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 ++++ P+ QGAI I ++ K + +NHE+T +++CERAFL LDGSC++ IA Sbjct: 10 SLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDGSCRTPIA 69 Query: 250 GFA-YCKGSTLYFYGIVLASDGKIFHEVSRNGN--RCDAINIGRDAAQYIRFISNKNVF 305 G+A + F G+V + DG E SR G D + +G+DA Q + + F Sbjct: 70 GYASKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLSRAGPGFF 128 >gi|23011609|ref|ZP_00051918.1| COG0181: Porphobilinogen deaminase [Magnetospirillum magnetotacticum MS-1] Length = 119 Score = 89.4 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 38/114 (33%), Positives = 56/114 (49%) Query: 192 EDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGF 251 E+ P+ QGA+ IE + + L+ + T +++ ER LAELDGSC++ IA Sbjct: 2 EEMLPAVAQGALGIECRARDDAIRALLAPVACATTTTALDAERGLLAELDGSCRTPIAAL 61 Query: 252 AYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 A +G L G++ DG V R G DA IGRDA ++ + F Sbjct: 62 ARIQGDRLSLDGLLFLPDGSRHWAVHREGATSDAAEIGRDAGAELKRAAGDVYF 115 >gi|167038282|ref|YP_001665860.1| porphobilinogen deaminase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|166857116|gb|ABY95524.1| Porphobilinogen deaminase [Thermoanaerobacter pseudethanolicus ATCC 33223] Length = 168 Score = 88.3 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 59/164 (35%), Gaps = 7/164 (4%) Query: 138 LLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPS 197 + SDI ++ RG + TRL K+ I+L+ AG+ RL E +I E + P+ Sbjct: 4 IQALMSDIQIVPIRGNVRTRLKKMEELNLDGIVLSAAGLHRLGLESIITEYFPPDVVVPA 63 Query: 198 PGQGAICIETHVNNPK-AQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYC-- 254 P QG + +E + QE I T+ + ER L +C+ +A Sbjct: 64 PCQGILAVEIAESFDNIFQEFYSYIVDRRTFFEASVERELLKAFGVNCRQPFGAYAQYRK 123 Query: 255 --KGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + D + G + + + Sbjct: 124 EKDEEKINIKVVYQKED--KLLKSEVTGLIEETDKMIEKLIEEF 165 >gi|325118217|emb|CBZ53768.1| putative porphobilinogen deaminase [Neospora caninum Liverpool] Length = 683 Score = 87.9 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 93/263 (35%), Gaps = 76/263 (28%) Query: 116 QSLKDLALHSVIGTSSLRRKALLLRW--RSDISVIDFRGKIETRLNKLNNNKAHAILLAY 173 + A + GT SLRR+ALL ++ RG ++TR+ ++ K A LLA Sbjct: 401 KEHFGDAGKPIFGTCSLRRQALLHALLPPGSFHLMGLRGNVQTRMRRIEEGKLDATLLAA 460 Query: 174 AGIKRL----------------------------KKEKVIKEILNIEDFPPSPGQGAICI 205 AG+KRL + V +L E F P+ QG + + Sbjct: 461 AGLKRLCLLPSLLSPSRDSGPLASPLGCVSTHARGRACVEAVLLPAEVFVPAVCQGVVGV 520 Query: 206 ETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG--------- 256 + + + L+ +N + CERAFL LDGSC++ IAG A +G Sbjct: 521 QCRSADTRILSLLHSLNSLSSRGQARCERAFLRALDGSCRTPIAGIAQWRGVTDRRQETT 580 Query: 257 ---------------------------------STLYFYGIVLASDGKIFHEVSR----N 279 + L F G++ DGK R Sbjct: 581 QPERKTPDERTDRRDVKGGEEGWGGHPDCFTEKAELRFCGVLATPDGKHLFRHERAVQGV 640 Query: 280 GNRCDAINIGRDAAQYIRFISNK 302 +A +G A+ I+ + Sbjct: 641 RTPEEAEELGHAVAEEIKKAAGA 663 Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 38/73 (52%), Positives = 53/73 (72%) Query: 40 IIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISA 99 I+PL T GD + L ++GGKGLFT+E++ L++G++D VHS KD+PT+L G +I A Sbjct: 242 IVPLQTTGDSALHLPLAQLGGKGLFTKELDVALLAGQVDVVVHSMKDVPTELPPGTEIGA 301 Query: 100 YLPREDIRDVFIS 112 +LPRED RD FI Sbjct: 302 FLPREDPRDAFIY 314 Score = 41.3 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 12/25 (48%), Positives = 14/25 (56%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSL 27 R+G+R SPLALA A E L Sbjct: 142 NSTLRVGSRASPLALAQAREFVYRL 166 >gi|146332076|gb|ABQ22544.1| porphobilinogen deaminase-like protein [Callithrix jacchus] Length = 163 Score = 87.9 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 58/154 (37%), Gaps = 29/154 (18%) Query: 182 EKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELD 241 + +IL+ E+ + GQGA+ +E + ++V V++ +T ERAFL L+ Sbjct: 1 HNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDMVGVLHDPETLLRCIAERAFLRHLE 60 Query: 242 GSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD------ 284 G C +A K LY G V + DG + + +G D Sbjct: 61 GGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQDTMQATIHVPAQHEDGPEDDPQLVGI 120 Query: 285 ------------AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 121 TARNIPRGPQLAAQNLGISLANLLLSKGAKNILD 154 >gi|256751190|ref|ZP_05492071.1| Porphobilinogen deaminase [Thermoanaerobacter ethanolicus CCSD1] gi|256749915|gb|EEU62938.1| Porphobilinogen deaminase [Thermoanaerobacter ethanolicus CCSD1] Length = 161 Score = 87.5 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 56/160 (35%), Gaps = 7/160 (4%) Query: 142 RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQG 201 SDI ++ RG + TRL K+ I+L+ AG+ RL E +I E + P+P QG Sbjct: 1 MSDIQIVPVRGNVRTRLKKMEELNLDGIVLSAAGLHRLGLENIITEYFPPDVVVPAPCQG 60 Query: 202 AICIETHVNNPKAQELVKVIN-HEDTWDSVNCERAFLAELDGSCKSAIAGFAYC----KG 256 + +E + + T+ + ER L +C+ +A Sbjct: 61 ILAVEIAESFDNIFQEFYPYIVDRRTFFEASVERELLKVFGVNCRQPFGAYAQYRKEEDE 120 Query: 257 STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + + D + G + + + Sbjct: 121 EKINIKVVYQKED--KLLKSEVTGLIEETDKMIEKLIEEF 158 >gi|255029220|ref|ZP_05301171.1| porphobilinogen deaminase [Listeria monocytogenes LO28] Length = 128 Score = 87.5 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 2/119 (1%) Query: 187 EILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKS 246 E + E P+ GQGA+ IE ++ + ++++ I+HE+T V ER FL +L+G C+ Sbjct: 6 EDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKKLNGGCEI 65 Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 IAGFA + F G+V +DG I E + G + IG A+ + + Sbjct: 66 PIAGFATRANEFVQFKGLVGNADGSIILESEQVG--ANPSEIGNKVAEDLLSEGADTII 122 >gi|238488539|ref|XP_002375507.1| hypothetical protein AFLA_014870 [Aspergillus flavus NRRL3357] gi|220697895|gb|EED54235.1| hypothetical protein AFLA_014870 [Aspergillus flavus NRRL3357] Length = 90 Score = 87.1 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 34/82 (41%), Positives = 43/82 (52%), Gaps = 2/82 (2%) Query: 5 PFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLF 64 P RIGTR S LA+ A R+ L + P + I L T GDR L G K L+ Sbjct: 10 PLRIGTRRSNLAMVQAEGIRNCLQKI--APGRSFEIEALRTLGDRDQLTALYNFGAKSLW 67 Query: 65 TEEIEKKLISGEIDCAVHSAKD 86 T E+E+KL +GE+D VH K Sbjct: 68 TTELEEKLNAGELDVIVHCLKG 89 >gi|329945529|ref|ZP_08293267.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328528774|gb|EGF55723.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 149 Score = 87.1 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 8/141 (5%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVH-------KIPPHNIVIIPLSTKGDRITNRTL 55 ++ R+GTR S LAL + + +L + ++ + T GD L Sbjct: 10 ERRLRLGTRGSRLALTQSGQVADALRQAAAAGARAPGCDNLELDLVTVRTDGDGDR-TPL 68 Query: 56 TEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA 115 ++GG G+F + L+ GE+D VHS KD+PT+ ++GL++ PRED D + Sbjct: 69 RQLGGVGVFAARLRHALLDGEVDLVVHSFKDLPTQPVEGLEVICVPPREDPHDALCARDG 128 Query: 116 QSLKDLALHSVIGTSSLRRKA 136 +L L + +GT S RR A Sbjct: 129 LTLATLPDGARVGTGSPRRAA 149 >gi|293194048|ref|ZP_06609930.1| hydroxymethylbilane synthase [Actinomyces odontolyticus F0309] gi|292819802|gb|EFF78811.1| hydroxymethylbilane synthase [Actinomyces odontolyticus F0309] Length = 166 Score = 86.0 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 9/152 (5%) Query: 164 NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPK-AQELVKVIN 222 + A++LA AG++R+ + ++L+ P+P QGA+ IET + L+ +N Sbjct: 4 ERLDAVVLALAGLRRIGLDAHATDVLHPAIMMPAPSQGALAIETRDEDDPLLHALLGTLN 63 Query: 223 HEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKG--STLYFYGIVLASDGKIFHEVSRNG 280 H T + + ERA L+ L C + + FA S L V++ DG+ + + Sbjct: 64 HRPTALAASAERAVLSALGAGCAAPVGAFARVDEASSVLLLDARVMSVDGRERVKARGSL 123 Query: 281 N------RCDAINIGRDAAQYIRFISNKNVFN 306 +A +G D A+ + V + Sbjct: 124 ALTDSVGLDEAARLGEDVARQLLAGGAAEVTD 155 >gi|323338379|gb|EGA79604.1| Hem3p [Saccharomyces cerevisiae Vin13] Length = 152 Score = 86.0 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 4/149 (2%) Query: 119 KDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNN--NKAHAILLAYAGI 176 ++GTSS+RR A L R + RG I+TRL KL++ + I+LA AG+ Sbjct: 1 MTFQTGGIVGTSSVRRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIILASAGL 60 Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ E I + + + + GQGA+ IE + K +++ I + ERA Sbjct: 61 MRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCLSERAL 120 Query: 237 LAELDGSCKSAIAGFAYCKGST--LYFYG 263 + L+G C I + T + G Sbjct: 121 MRTLEGGCSVPIGVESKYNEETKKITIKG 149 >gi|51241768|dbj|BAD36778.1| porphobilinogen deaminase [Homo sapiens] Length = 157 Score = 86.0 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 34/146 (23%), Positives = 54/146 (36%), Gaps = 29/146 (19%) Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 + E+ + GQGA+ +E + +LV V++ +T ERAFL L+G C +A Sbjct: 3 HPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSVPVA 62 Query: 250 GFAYCKGSTLYFYGIVLASDGKIFHEVSR-----------NGNRCD-------------- 284 K LY G V + DG + + +G D Sbjct: 63 VHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLVGITARNIPRG 122 Query: 285 ----AINIGRDAAQYIRFISNKNVFN 306 A N+G A + KN+ + Sbjct: 123 PQLAAQNLGISLANLLLSKGAKNILD 148 >gi|62467569|gb|AAX83934.1| Hem3p [Saccharomyces cerevisiae] Length = 97 Score = 86.0 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 6/92 (6%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M + IG R S LA+ + + + + P ++ + L T GD+I + L GG Sbjct: 1 MGPETLHIGGRKSKLAVIQSNHVLKLIEEKY--PDYDCKVFTLQTLGDQIQFKPLYSFGG 58 Query: 61 KGLFTEEIEKKLIS----GEIDCAVHSAKDMP 88 K L+T+E+E L ++D VHS KDMP Sbjct: 59 KALWTKELEDHLYHDDPSKKLDLIVHSLKDMP 90 >gi|218673006|ref|ZP_03522675.1| porphobilinogen deaminase [Rhizobium etli GR56] Length = 111 Score = 85.6 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 45/108 (41%), Positives = 69/108 (63%) Query: 199 GQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST 258 QGAICIE+ V + +L+ +N T+D+V+CERAFLA LDGSC++ I G+A C+G Sbjct: 1 AQGAICIESRVGDTGIDDLLAAVNDAATFDTVSCERAFLAALDGSCRTPIGGYAVCEGDL 60 Query: 259 LYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVFN 306 + F G+++ DG+ H V+ +G+R DA +G A Q +R + F+ Sbjct: 61 IRFSGLIITPDGRSQHAVTTDGHRRDAAALGTRAGQDVRARAGSAFFD 108 >gi|169837036|ref|ZP_02870224.1| Porphobilinogen deaminase [candidate division TM7 single-cell isolate TM7a] Length = 119 Score = 84.4 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 2/115 (1%) Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + E + + F P+PGQG +CI+ N+ K + L+++IN ++ ER F DG C Sbjct: 1 MSEYFDTDFFMPAPGQGILCIQCRENDNKIRHLLEIINDDEVTMMCEAEREFSKIFDGGC 60 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFI 299 + I + +G TL G+ +G + GN+ + I + A+ I+ Sbjct: 61 HTPIGCSSVIEGDTLKLKGM-FNDNGSRMLK-EVEGNKENPKEIAQKLAEEIKKE 113 >gi|77799154|gb|ABB03720.1| putative porphobilinogen deaminase [Sorghum bicolor] Length = 98 Score = 84.4 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 3/95 (3%) Query: 215 QELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK-GSTLYFYGIVLASDGKIF 273 E + +NHEDT +V CER FLA LDG+C++ IA +AY F G++ + DG Sbjct: 1 MEYLSSLNHEDTRLAVACEREFLAVLDGNCRTPIAAYAYRDKDGNCSFRGLLASPDGSKV 60 Query: 274 HEVSRNGNR--CDAINIGRDAAQYIRFISNKNVFN 306 E +R+G D + +G+DA ++ + F+ Sbjct: 61 FETTRSGPYSFDDMVELGKDAGHELKAKAGPGFFD 95 >gi|221488268|gb|EEE26482.1| porphobilinogen deaminase, putative [Toxoplasma gondii GT1] Length = 174 Score = 83.3 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 5/121 (4%) Query: 190 NIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIA 249 + F P+ QG I ++ + L++ +N + CERAFL LDGSC++ IA Sbjct: 37 PADVFVPAVCQGIIGVQCRSADTGILSLLRELNSPSSRGQALCERAFLRALDGSCRTPIA 96 Query: 250 GFAYCK-GSTLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIRFISNKNV 304 G A + + L F G++ DGK R +A +GR A+ I+ + + Sbjct: 97 GIAEWRAKTELRFCGVLATPDGKQLFREERTVRGVRTPEEAEALGRAVAEEIKKAAGADR 156 Query: 305 F 305 Sbjct: 157 L 157 >gi|213583680|ref|ZP_03365506.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 69 Score = 81.7 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 22/59 (37%) Query: 247 AIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNVF 305 I +A ++ +V A DG + R G+ A +G A+ + + + Sbjct: 1 PIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENGARAIL 59 >gi|317471677|ref|ZP_07931019.1| porphobilinogen deaminase domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|316900848|gb|EFV22820.1| porphobilinogen deaminase domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 133 Score = 80.6 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 2/133 (1%) Query: 164 NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINH 223 + A+++A AG+KR ++ I ++E+ P+ GQG +C++ Q L I+ Sbjct: 1 GQYSALIMAAAGLKRAGLKERISRYFSVEEMLPAAGQGTLCVQV--RKDFDQSLFFCIHD 58 Query: 224 EDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRC 283 +T ER F+ LDG C S IA +A G+ L G+ + ++S NG Sbjct: 59 RETELVTEAERGFVRALDGGCSSPIAAYAEITGNDLCLTGLYYNAADNTGRKMSINGKAQ 118 Query: 284 DAINIGRDAAQYI 296 DA +G A+ I Sbjct: 119 DAGELGCRLAEQI 131 >gi|329944047|ref|ZP_08292313.1| Porphobilinogen deaminase domain protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328531093|gb|EGF57944.1| Porphobilinogen deaminase domain protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 206 Score = 80.2 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 25/168 (14%) Query: 164 NKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETH--VNNPKAQELVKVI 221 A++LA +G++RL E E+L++E P+P QGA+ +E + + Sbjct: 30 GDLDAVVLALSGLRRLGLEHCASEVLDLETMLPAPAQGALAVEARAGEGSAALARAAAAL 89 Query: 222 NHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGST-----LYFYGIVLASDGKIFHEV 276 + E T +V ERA +A L C + + +A+ G L +V + DG Sbjct: 90 DDEPTRLAVTAERALMARLGAGCAAPVGAWAHLSGGEQEQRVLALRAVVTSLDGGKEVGC 149 Query: 277 SRNGNRCD------------------AINIGRDAAQYIRFISNKNVFN 306 + + A +G AA+ + V + Sbjct: 150 ELSAELPEADSGPDTYGNAVAQAVRAAEALGVRAAEVLLEDGAAEVVD 197 >gi|302850188|ref|XP_002956622.1| hypothetical protein VOLCADRAFT_119454 [Volvox carteri f. nagariensis] gi|300258149|gb|EFJ42389.1| hypothetical protein VOLCADRAFT_119454 [Volvox carteri f. nagariensis] Length = 206 Score = 78.3 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 16/198 (8%) Query: 120 DLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL 179 +L S +GTSS RR A + + V+ RG +ETRL ++ + + A +L+ AG++RL Sbjct: 1 ELMPGSRVGTSSSRRAAQIRHGFPHLQVVQLRGNVETRLERIKSREISATVLSMAGLQRL 60 Query: 180 KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAE 239 E + +L++++ P+ QGA+ + ++P + + I+H T+ V+ ERA L Sbjct: 61 GCEDMASAVLSMDEMLPAACQGAVGVVCREDDPWVIQQLTAISHRSTFLEVSAERACLTA 120 Query: 240 LDGSCKS----------AIAGFAYCKGS--TLYFYGIVLASDGKIFHEVSRNG----NRC 283 L GS ++ A A T+ V G+ + N+ Sbjct: 121 LLGSEEAGRAGEHFPALAWGCHASHHPDSATMDLDCFVSDLQGEGLTRYTEYDRLILNQT 180 Query: 284 DAINIGRDAAQYIRFISN 301 DA ++G +R ++ Sbjct: 181 DAEDLGSLYGNLMRMVAG 198 >gi|3172393|gb|AAC18578.1| porphobilinogen deaminase [Geobacillus stearothermophilus] Length = 57 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Query: 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGK 61 + +G+R S LAL L + P + + TKGD+I N TL+++GGK Sbjct: 1 MRKIIVGSRRSKLALTQTNWVIEQLKRLGA--PFEFEVKEIVTKGDKIINVTLSKVGGK 57 >gi|207347144|gb|EDZ73427.1| YDL205Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 144 Score = 77.1 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 51/136 (37%), Gaps = 6/136 (4%) Query: 177 KRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAF 236 R+ E I + + + + GQGA+ IE + K +++ I + ERA Sbjct: 1 MRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCLSERAL 60 Query: 237 LAELDGSCKSAIAGFAYCKGST--LYFYGIVLASDGKIFHEVSRNGNRC----DAINIGR 290 + L+G C I + T L IV+ +G E D++ G+ Sbjct: 61 MRTLEGGCSVPIGVESKYNEETKKLLLKAIVVDVEGTEAVEDEIEMLIENVKEDSMACGK 120 Query: 291 DAAQYIRFISNKNVFN 306 A+ + K + + Sbjct: 121 ILAERMIADGAKKILD 136 >gi|467060|gb|AAA17244.1| hem3a [Mycobacterium leprae] Length = 134 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 9/121 (7%) Query: 193 DFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFA 252 P+P QGAI +E + + ++ ++ DT +V ER LAEL+ C + + A Sbjct: 2 QMVPAPAQGAIAVECRAGDSRLVAVLAALDDADTRAAVTAERVLLAELEAGCSAPVGAIA 61 Query: 253 YCKG---------STLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKN 303 L G V A DG S A +G A + + + Sbjct: 62 QVVESIDGEGRVFEELSLRGCVAALDGSDVIRASGISTSGRASELGLAVAVELFELGARE 121 Query: 304 V 304 + Sbjct: 122 L 122 >gi|326772618|ref|ZP_08231902.1| hydroxymethylbilane synthase [Actinomyces viscosus C505] gi|326637250|gb|EGE38152.1| hydroxymethylbilane synthase [Actinomyces viscosus C505] Length = 140 Score = 74.4 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 14/130 (10%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVH-------------KIPPHNIVIIPLSTKGDRI 50 + R+GTR S LAL + + +LM I ++ + T GD Sbjct: 9 RRLRLGTRGSRLALTQSGQVAEALMAAGGGGAAAAAGKASEGSGSLGIDLVTVRTDGDGD 68 Query: 51 TNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVF 110 L ++GG G+F + L+ GE+D VHS KD+PT+ ++GL++ PRED RD Sbjct: 69 R-TPLRQLGGVGVFAARLRHALLDGEVDLVVHSFKDLPTQPVEGLEVICVPPREDPRDAL 127 Query: 111 ISHTAQSLKD 120 + + +L D Sbjct: 128 CARDSLTLAD 137 >gi|294896302|ref|XP_002775489.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983] gi|239881712|gb|EER07305.1| porphobilinogen deaminase, putative [Perkinsus marinus ATCC 50983] Length = 539 Score = 72.5 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 101/280 (36%), Gaps = 53/280 (18%) Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQ 96 + GD L ++ G+FT + L++G D VHS KD+P G Sbjct: 7 EVECHYREAPGDTNLKDPLWKMPETGVFTSFLRDGLMNGAFDLVVHSWKDLPLAEESGTT 66 Query: 97 ISAYLPREDIRDVFISHTAQSLKDLALHSV--IGTSSLRRKALLLRW-------RSDISV 147 + A LPR D RD+ + + + + +SS RR+ L + + + Sbjct: 67 VVATLPRADPRDLLLIRRDAIEEMTSEGGKLIVLSSSPRRQFNLTPFLESVVPGVTSVQF 126 Query: 148 IDFRGKI--------------ETRLNKLNN---------NKAHAILLAYAGIKRLKKEKV 184 D RG I +TR+ KL + + H +++A A + R + Sbjct: 127 RDVRGNIQVQPMGSSPYEGLLQTRMRKLMDPTIHDESLGCRPHGLVVAKAAVDRFIRSTR 186 Query: 185 -----------------IKEILNIEDFPPSPGQGAICIETHVNNPKAQ--ELVKVINHED 225 +L + P + QGA+ IE K ++V+ +N Sbjct: 187 EEFKESRQLVQGYISDCRCMVLPLSANPTAAAQGALGIEVSTAPEKEHVRKIVRSLNDRS 246 Query: 226 TWDSVNCERAFLAELDGSCKSAIAG--FAYCKGSTLYFYG 263 T+D+ + E+ L G C I G L+ G Sbjct: 247 TFDAASKEKELLNSYGGGCHQKIGCTILPRQYGDVLFLCG 286 >gi|306835113|ref|ZP_07468154.1| porphobilinogen deaminase [Corynebacterium accolens ATCC 49726] gi|304569028|gb|EFM44552.1| porphobilinogen deaminase [Corynebacterium accolens ATCC 49726] Length = 89 Score = 72.1 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 6/88 (6%) Query: 8 IGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEE 67 IGTR S LA A R L+D + + ++T GD TN E G G+FT+ Sbjct: 4 IGTRGSKLATTQAGHVRDWLIDA----GFDSELHIVTTAGD--TNMAPVERIGVGVFTQA 57 Query: 68 IEKKLISGEIDCAVHSAKDMPTKLLKGL 95 + + L GE D AVHS KD+PT Sbjct: 58 LREALCRGECDIAVHSFKDLPTAEDDRF 85 >gi|237833021|ref|XP_002365808.1| porphobilinogen deaminase, putative [Toxoplasma gondii ME49] gi|211963472|gb|EEA98667.1| porphobilinogen deaminase, putative [Toxoplasma gondii ME49] Length = 729 Score = 70.6 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 39/89 (43%), Positives = 58/89 (65%) Query: 24 RSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHS 83 S L ++ + I+P+ T GD+ + L ++GGKGLFT+E++ L+ G++D VHS Sbjct: 252 ASLLRVDSRLEYGELRIVPMQTTGDKELHLPLAQVGGKGLFTKELDLALLHGQVDVVVHS 311 Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFIS 112 KD+PT+L +G +I AYLPRED RD I Sbjct: 312 LKDVPTELPEGTEIGAYLPREDPRDALIF 340 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 48/164 (29%), Positives = 71/164 (43%), Gaps = 33/164 (20%) Query: 125 SVIGTSSLRRKALLLRW--RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-- 180 IGT SLRR+ALL S ++ RG ++TR++++ A LLA AG+KRL Sbjct: 440 PRIGTCSLRRQALLYALLPPSSFQLMGLRGNVQTRMSRIEKGTLDATLLAAAGLKRLNLL 499 Query: 181 -----------------------------KEKVIKEILNIEDFPPSPGQGAICIETHVNN 211 V +L + F P+ QG I ++ + Sbjct: 500 SAMLAPSPSATPSPCPASSPNEASRGTEPGGCVEAVLLPADVFVPAVCQGIIGVQCRSAD 559 Query: 212 PKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK 255 L++ +N + CERAFL LDGSC++ IAG A + Sbjct: 560 TGILSLLRELNSPSSRGQALCERAFLRALDGSCRTPIAGIAEWR 603 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 4/58 (6%) Query: 252 AYCKGSTLYFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIRFISNKNVF 305 + + + L F G++ DGK R +A +GR A+ I+ + + Sbjct: 655 CFTEKTELRFCGVLATPDGKQLFREERTVRGVRTPEEAEALGRAVAEEIKKAAGADRL 712 Score = 42.8 bits (99), Expect = 0.057, Method: Composition-based stats. Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPP 35 EK P R+G+R SPLALA A + L + P Sbjct: 159 EKTPLRVGSRASPLALAQARQFVYRL--ALRFPD 190 >gi|70780272|gb|AAZ08387.1| porphobilinogen deaminase [Toxoplasma gondii] Length = 747 Score = 70.6 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 39/89 (43%), Positives = 58/89 (65%) Query: 24 RSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHS 83 S L ++ + I+P+ T GD+ + L ++GGKGLFT+E++ L+ G++D VHS Sbjct: 255 ASLLRVDSRLEYGELRIVPMQTTGDKELHLPLAQVGGKGLFTKELDLALLHGQVDVVVHS 314 Query: 84 AKDMPTKLLKGLQISAYLPREDIRDVFIS 112 KD+PT+L +G +I AYLPRED RD I Sbjct: 315 LKDVPTELPEGTEIGAYLPREDPRDALIF 343 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 48/164 (29%), Positives = 71/164 (43%), Gaps = 33/164 (20%) Query: 125 SVIGTSSLRRKALLLRW--RSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLK-- 180 IGT SLRR+ALL S ++ RG ++TR++++ A LLA AG+KRL Sbjct: 443 PRIGTCSLRRQALLYALLPPSSFQLMGLRGNVQTRMSRIEKGTLDATLLAAAGLKRLNLL 502 Query: 181 -----------------------------KEKVIKEILNIEDFPPSPGQGAICIETHVNN 211 V +L + F P+ QG I ++ + Sbjct: 503 SAMLAPSPSATPSPCPAPSPNETSRGTEPGGCVEAVLLPADVFVPAVCQGIIGVQCRSAD 562 Query: 212 PKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCK 255 L++ +N + CERAFL LDGSC++ IAG A + Sbjct: 563 TGILSLLRELNSPSSRGQALCERAFLRALDGSCRTPIAGIAEWR 606 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 5/63 (7%) Query: 248 IAGFAYCKGSTL-YFYGIVLASDGKIFHEVSRNG----NRCDAINIGRDAAQYIRFISNK 302 A G L F G++ DGK R +A +GR A+ I+ + Sbjct: 668 CGVLATPDGKQLLRFCGVLATPDGKQLFREERTVRGVRTPEEAEALGRAVAEEIKKAAGA 727 Query: 303 NVF 305 + Sbjct: 728 DRL 730 Score = 42.8 bits (99), Expect = 0.057, Method: Composition-based stats. Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPP 35 EK P R+G+R SPLALA A + L + P Sbjct: 159 EKTPLRVGSRASPLALAQARQFVYRL--ALRFPD 190 >gi|281415815|ref|ZP_06247557.1| hydroxymethylbilane synthase [Micrococcus luteus NCTC 2665] Length = 71 Score = 69.8 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 6/75 (8%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGG 60 M P RIGTR S LA +L ++ + T+GD +T +L +GG Sbjct: 1 MS--PLRIGTRGSALATTQTSHVAEALTARS---GLAHELVVIRTEGD-VTTGSLASLGG 54 Query: 61 KGLFTEEIEKKLISG 75 G+F + ++ G Sbjct: 55 TGVFASALRAAVLDG 69 >gi|70931402|ref|XP_737390.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56512740|emb|CAH87819.1| hypothetical protein PC000109.00.0 [Plasmodium chabaudi chabaudi] Length = 169 Score = 67.5 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 58/122 (47%) Query: 185 IKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244 + LN P+ QG I + ++ NNP+ +++K IN E + N ER FL ++DGSC Sbjct: 37 NIQKLNTNVMCPALCQGIIAVTSNKNNPEISQILKNINDEKSQIMANIERTFLHKIDGSC 96 Query: 245 KSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 I G+ + + F I+ +G H++ + + I +AA+ I+ Sbjct: 97 TMPIGGYTKFSKNKIIFNAIINDINGLESHKIKVVRHLNNLDGIADEAAEKIKEKIGIEQ 156 Query: 305 FN 306 FN Sbjct: 157 FN 158 >gi|149452688|ref|XP_001516450.1| PREDICTED: similar to hydroxymethylbilane synthase [Ornithorhynchus anatinus] Length = 218 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 45/115 (39%), Positives = 61/115 (53%), Gaps = 4/115 (3%) Query: 77 IDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGTSSLR 133 +D VHS KD+PT L G I A RE D + H ++L L SV+GTSSLR Sbjct: 90 VDLVVHSLKDLPTVLPPGFTIGAVCKRESPYDAVVFHPKHVGKTLATLPEKSVVGTSSLR 149 Query: 134 RKALLLRWRSDISVIDFRGKIETRLNKLNN-NKAHAILLAYAGIKRLKKEKVIKE 187 R A L R + RG + TRL KL+ + AI+LA AG++RL + + + Sbjct: 150 RAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQRLGWQSRLGQ 204 >gi|58698960|ref|ZP_00373817.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila ananassae] gi|58534526|gb|EAL58668.1| porphobilinogen deaminase [Wolbachia endosymbiont of Drosophila ananassae] Length = 62 Score = 64.0 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Query: 6 FRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTE 57 +IGTR S LA+ A E + L+D P +I I+ + + GD+ N L E Sbjct: 13 VKIGTRGSKLAVVQALEAKQKLLD--SFPNLSIEIVKIKSSGDKYANANLAE 62 >gi|332187060|ref|ZP_08388801.1| porphobilinogen deaminase, C-terminal domain protein [Sphingomonas sp. S17] gi|332013070|gb|EGI55134.1| porphobilinogen deaminase, C-terminal domain protein [Sphingomonas sp. S17] Length = 107 Score = 63.6 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 2/102 (1%) Query: 203 ICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFY 262 + IET ++ A L+ I+H +T V ER+ LA L C S +A A G L Sbjct: 1 MGIETRADDAAATMLIGSIDHAETHACVMAERSLLAALQADCHSPVAALASLSGEMLTLR 60 Query: 263 GIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRFISNKNV 304 +LA DG G +G A + + V Sbjct: 61 AELLAEDGSARVSGWVEGAL--GEELGPRLAIDLLDRAPPEV 100 >gi|94468604|gb|ABF18151.1| hydroxymethylbilane synthase-like protein [Aedes aegypti] Length = 349 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 6/111 (5%) Query: 179 LKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLA 238 + EK I +++ + + GQGA+ +E N+ ++ + H +T + ER+FL Sbjct: 1 MGWEKRIDQVIEPSEILYAVGQGALAVECRSNDEYILNMLSKLCHLETQCKILVERSFLK 60 Query: 239 ELDGSCKSAIAGFAYCK------GSTLYFYGIVLASDGKIFHEVSRNGNRC 283 L G C + +A K + L G V + DGK + Sbjct: 61 TLGGGCSAPVAVCTSLKRKHDSKSNYLNIQGAVWSLDGKTEIRADDGCSVE 111 >gi|167949214|ref|ZP_02536288.1| porphobilinogen deaminase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 136 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 34/139 (24%), Positives = 53/139 (38%), Gaps = 19/139 (13%) Query: 172 AYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVN 231 AG+KRL E+ I + E P+ GQGAI IE ++ + L+ ++H DT V+ Sbjct: 6 PSAGLKRLGFEQRITAFIAPEQSLPAIGQGAIGIECRSDDAQVNALIAPLHHVDTAACVH 65 Query: 232 CERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDG----------KIFHEVSRNGN 281 ERA L G S + V A+ G G Sbjct: 66 AERAMNNRLMGG--SPC-ADCRLRD------AGVPATSGCVVWWARSTVARSCVGEAEGT 116 Query: 282 RCDAINIGRDAAQYIRFIS 300 +A ++G A+ + + Sbjct: 117 PDEAESLGVGLAERLLELG 135 >gi|307826363|ref|ZP_07656567.1| Porphobilinogen deaminase [Methylobacter tundripaludum SV96] gi|307732604|gb|EFO03477.1| Porphobilinogen deaminase [Methylobacter tundripaludum SV96] Length = 337 Score = 57.1 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 42/90 (46%) Query: 153 KIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNP 212 + TRL+KL++ + AI+LA AG+KRL + I + L+ P+ GQGAI IE + Sbjct: 1 NVNTRLSKLDSGEYDAIILASAGLKRLGMAERITQCLDTSVSLPAIGQGAIGIECRIALL 60 Query: 213 KAQELVKVINHEDTWDSVNCERAFLAELDG 242 A I +W A + Sbjct: 61 VAGAGAFYIADYASWKVAYFVMATAMSVGL 90 >gi|113707391|gb|ABI36594.1| hydroxymethylbilane synthase [Homo sapiens] Length = 87 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 35/82 (42%) Query: 201 GAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLY 260 GA+ +E + +LV V++ +T ERAFL L+G C +A K LY Sbjct: 1 GALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSVPVAVHTAMKDGQLY 60 Query: 261 FYGIVLASDGKIFHEVSRNGNR 282 G V + DG + + Sbjct: 61 LTGGVWSLDGSDSIQETMQATI 82 >gi|291080775|ref|ZP_06535168.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 47 Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%) Query: 34 PPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISG 75 P + ++P+ T+GD I + L ++GGKGLF +E+E L Sbjct: 5 PGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALRRK 46 >gi|73760286|dbj|BAE20060.1| hydroxymethylbilane synthase [Capra hircus] Length = 109 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 4/93 (4%) Query: 106 IRDVFISHTA---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLN 162 + + H ++L+ L SV+GTSSLRR A L R + + RG + TRL KL+ Sbjct: 17 PMNAVVFHPKFVGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFRNIRGNLNTRLRKLD 76 Query: 163 N-NKAHAILLAYAGIKRLKKEKVIKEILNIEDF 194 + AI+LA AG++R+ + + +IL+ E+ Sbjct: 77 ELQEFSAIILAAAGLQRMGWQNRVGQILHPEEC 109 >gi|209738608|gb|ACI70173.1| Porphobilinogen deaminase [Salmo salar] gi|221220784|gb|ACM09053.1| Porphobilinogen deaminase [Salmo salar] Length = 55 Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 2/40 (5%) Query: 4 KPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPL 43 + RIGTR S LA L ++ P +I I+ + Sbjct: 17 RVIRIGTRNSQLARIQTDSVAEKLKGLY--PDVHIEIVGI 54 >gi|301102801|ref|XP_002900487.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262101750|gb|EEY59802.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 96 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 19/49 (38%) Query: 248 IAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYI 296 + A TL VL+ DGK + +G R +G+ A+ Sbjct: 1 MGVSATLDEDTLTLNATVLSRDGKESVHETISGPRTQCEELGKQLAERF 49 >gi|238917296|ref|YP_002930813.1| hypothetical protein EUBELI_01371 [Eubacterium eligens ATCC 27750] gi|238872656|gb|ACR72366.1| Hypothetical protein EUBELI_01371 [Eubacterium eligens ATCC 27750] Length = 287 Score = 52.9 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 82/218 (37%), Gaps = 14/218 (6%) Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVH-----SAKDMPTKLLKGLQISAYLPREDIRDVFI 111 EIGG ++ +E + V + +L G+ IS + R D R V I Sbjct: 42 EIGGSDIY-PALEALIDDNIDMVLVDMRMLVEMEKSGQQLDDGIVISGVIKRRDPRYVMI 100 Query: 112 SHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILL 171 KD+ ++V+ T S A++ ++ + I+ ++KL++ + A+ Sbjct: 101 RRRG--TKDVVENAVVVTDSDENAAVICEMYDNVECV-VENNIKDCMSKLDSEECDAVFA 157 Query: 172 AYAGIKRLKKEK---VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWD 228 Y I+ + +++ D P GQG CI T+ + + ++H T Sbjct: 158 FYDDIRIARLYNGLKYKYTLMDFSDCVPPHGQGIYCILTNGKRS-VIKHMFDVSHRTTAM 216 Query: 229 SVNCERAFLAELDGSCKSA-IAGFAYCKGSTLYFYGIV 265 S + E + L + + G + Y V Sbjct: 217 SFDIEEDIIRRLLMNDYVKSCNAYVKISGDKIEVYADV 254 >gi|2415549|emb|CAA04300.1| porphobilinogen deaminase [Campylobacter jejuni] Length = 88 Score = 52.5 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 35/82 (42%) Query: 210 NNPKAQELVKVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASD 269 ++ K EL+K +N E+ + ER F+A L+G C+ I A G + ++ D Sbjct: 7 HDEKILELLKCLNDENALIETSIEREFIATLEGGCQVPIGINAELLGDEICVRAVLGLPD 66 Query: 270 GKIFHEVSRNGNRCDAINIGRD 291 G + R + D G Sbjct: 67 GSEILKDKRMIKKNDFKGFGES 88 >gi|266622117|ref|ZP_06115052.1| putative porphobilinogen deaminase [Clostridium hathewayi DSM 13479] gi|288866173|gb|EFC98471.1| putative porphobilinogen deaminase [Clostridium hathewayi DSM 13479] Length = 121 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 3/114 (2%) Query: 184 VIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGS 243 E F P+ GQG + +E + E+ I ED + ER L LD Sbjct: 11 YDFHYFACEAFIPAGGQGILAVE-GRIEDRICEMAVRIQDEDAKTCLMLERKILKLLDAG 69 Query: 244 CKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIR 297 C + ++ +G + +G + D + V G + + AA+ +R Sbjct: 70 CHEPVGVYSRIRGEEIEVFG-ISRRD-RETKRVYLTGGIGELDLLAERAAKGLR 121 >gi|3668361|gb|AAC61857.1| porphobilinogen deaminase [Prosthecochloris vibrioformis] Length = 43 Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 20/42 (47%), Positives = 30/42 (71%) Query: 37 NIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEID 78 NI + + T GD + + L++IG GLFT++IEK L++GEID Sbjct: 2 NISLKLVKTTGDVLLDSPLSKIGDMGLFTKDIEKHLLAGEID 43 >gi|291546287|emb|CBL19395.1| Porphobilinogen deaminase, dipyromethane cofactor binding domain [Ruminococcus sp. SR1/5] Length = 40 Score = 44.4 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 14/28 (50%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLM 28 M++ IG+R S LA+ + R + Sbjct: 1 MKRDKIVIGSRESKLAVLQSEMVRDYIK 28 >gi|169841475|ref|ZP_02874588.1| hypothetical protein cdivTM_30268 [candidate division TM7 single-cell isolate TM7a] Length = 22 Score = 43.6 bits (101), Expect = 0.041, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 12/21 (57%) Query: 1 MEKKPFRIGTRCSPLALAHAF 21 M+ IGTR S LALA A Sbjct: 1 MKSNKIIIGTRGSILALAQAE 21 >gi|34391573|gb|AAN46745.1| hydroxymethylbilane synthase [Sus scrofa] Length = 37 Score = 42.8 bits (99), Expect = 0.063, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 13/26 (50%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSL 27 + + R+GTR S LA ++L Sbjct: 12 KMRVIRVGTRKSQLARIQTDSVVATL 37 >gi|225159193|ref|ZP_03725496.1| porphobilinogen deaminase [Opitutaceae bacterium TAV2] gi|224802195|gb|EEG20464.1| porphobilinogen deaminase [Opitutaceae bacterium TAV2] Length = 125 Score = 42.5 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 31/86 (36%), Gaps = 5/86 (5%) Query: 176 IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERA 235 + + L E P+ GQ AI ++ T +V ERA Sbjct: 7 LGITGWPGLTFHPLGFEHMVPAVGQAAIALQC---RSADAPRFAPHLDARTARAVTLERA 63 Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYF 261 F L G C++A+ A TL+F Sbjct: 64 FQTALGGGCQTALGVHAG--DDTLWF 87 >gi|4469314|emb|CAB38454.1| hydroxymethylbilane synthase [Rattus norvegicus] Length = 42 Score = 42.1 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 11/26 (42%) Query: 2 EKKPFRIGTRCSPLALAHAFETRSSL 27 + R+GTR S LA + L Sbjct: 17 MMRVIRVGTRKSQLARIQTDTVVAML 42 >gi|281415816|ref|ZP_06247558.1| hydroxymethylbilane synthase [Micrococcus luteus NCTC 2665] Length = 106 Score = 41.7 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 10/84 (11%), Positives = 16/84 (19%), Gaps = 28/84 (33%) Query: 247 AIAGFAYCKGST-----LYFYGIVLASDGKIFHEVS-----------RNGNRC------- 283 I A + +V A DG + G+ Sbjct: 1 PIGAVARVGDGEAGAPRIEMTAMVAALDGSRVLRRTSSVQLDPVPADVVGDPAAADEWLE 60 Query: 284 -----DAINIGRDAAQYIRFISNK 302 A +G A+ Sbjct: 61 DTLFVAAEALGVHVAEQFVAEGAD 84 >gi|118082447|ref|XP_001235330.1| PREDICTED: hypothetical protein [Gallus gallus] Length = 1622 Score = 41.7 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 28/241 (11%), Positives = 51/241 (21%), Gaps = 21/241 (8%) Query: 50 ITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGL---QISAYLPREDI 106 + L + + ++E + + +P + + Sbjct: 1247 FNSSQLDCREDQFIVEAKLEDPCCFSYLCVCESCIEPVPLCNEGEILTVDLHTIHYCCPH 1306 Query: 107 RDVFISHTAQSLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNKL-NNNK 165 + + + I TR KL K Sbjct: 1307 YYCVCDENFCPEPPMNCTDDMMVVKEKVPGQCCPEWHCECSC---ENITTRTCKLGEVQK 1363 Query: 166 AHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQ-------GAICIETHVNNPKAQELV 218 + + + G EK I E +PGQ G +C K Q Sbjct: 1364 IDSSISSACGCTHYICEKDDVCIFQ-EVTILNPGQSVIQYLDGDLCYTVQCLREKDQNTG 1422 Query: 219 KVINHEDTWDSVNCERAFLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSR 278 H T + A + S + G L +G Sbjct: 1423 YNAMHFTTVNCSQQCEAHQLYIPSSSHHSCCGTCQ------NVSCSFLTENGTRIVYEEG 1476 Query: 279 N 279 + Sbjct: 1477 S 1477 >gi|227485228|ref|ZP_03915544.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] gi|227236790|gb|EEI86805.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] Length = 32 Score = 40.9 bits (94), Expect = 0.24, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 15/32 (46%) Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLA 267 L+G C+ I +A G +L+ +V A Sbjct: 1 MNTRLEGGCQVPIGSYAELDGDSLWLRALVGA 32 >gi|148840388|gb|ABR14625.1| hydroxymethylbilane synthase [Felis catus] Length = 31 Score = 40.9 bits (94), Expect = 0.25, Method: Composition-based stats. Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 2/33 (6%) Query: 19 HAFETRSSLMDVHKIPPHNIVIIPLSTKGDRIT 51 + L ++ P I+ +ST GD+I Sbjct: 1 QTDSVVAVLKALY--PGLQFEIVAMSTTGDKIL 31 >gi|296803895|ref|XP_002842800.1| porphobilinogen deaminase [Arthroderma otae CBS 113480] gi|238846150|gb|EEQ35812.1| porphobilinogen deaminase [Arthroderma otae CBS 113480] Length = 282 Score = 40.1 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 10/73 (13%), Positives = 23/73 (31%), Gaps = 4/73 (5%) Query: 236 FLAELDGSCKSAIAGFAYCKGSTLYFYGIVLASDGKIFHEVSRNG---NRCDAINIGRDA 292 + L C + I + L IV++ D E + + + ++ G+ Sbjct: 200 LMCALRSGCNAPIGIETEWTATHLSIRAIVVSLDISQSVEDAIDAMMHTKDESDAPGQAL 259 Query: 293 AQYIRFISNKNVF 305 A + + Sbjct: 260 A-RLFGAGVAPIL 271 >gi|320534143|ref|ZP_08034681.1| hypothetical protein HMPREF9057_02577 [Actinomyces sp. oral taxon 171 str. F0337] gi|320133642|gb|EFW26052.1| hypothetical protein HMPREF9057_02577 [Actinomyces sp. oral taxon 171 str. F0337] Length = 42 Score = 39.8 bits (91), Expect = 0.53, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 2 EKKPFRIGTRCSPLALAHAFET 23 E + R+GTR S LAL + + Sbjct: 7 ESRRLRLGTRGSRLALTQSGQV 28 >gi|256394392|ref|YP_003115956.1| ROK family protein [Catenulispora acidiphila DSM 44928] gi|256360618|gb|ACU74115.1| ROK family protein [Catenulispora acidiphila DSM 44928] Length = 415 Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 7/59 (11%), Positives = 16/59 (27%), Gaps = 4/59 (6%) Query: 247 AIAGFAYCKG-STLYFYGIVLASDGKIFHE--VSRNG-NRCDAINIGRDAAQYIRFISN 301 A A + ++ DG G + + + D A+ + + Sbjct: 97 PEAAHAVAFDVGARHLRAALVGLDGTEVVRRDAEVEGRSAEEMVAAAVDLARELVEAAG 155 >gi|167946284|ref|ZP_02533358.1| porphobilinogen deaminase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 51 Score = 36.7 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 20/44 (45%), Positives = 29/44 (65%) Query: 57 EIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAY 100 GGKGLF +E+E+ ++ G D AVHS KD+P +L +GL + Sbjct: 3 RFGGKGLFVKELEQAMLEGRADIAVHSMKDVPAELPEGLHLPVI 46 >gi|261403042|ref|YP_003247266.1| protein of unknown function DUF39 [Methanocaldococcus vulcanius M7] gi|261370035|gb|ACX72784.1| protein of unknown function DUF39 [Methanocaldococcus vulcanius M7] Length = 507 Score = 36.3 bits (82), Expect = 5.8, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 20/48 (41%), Gaps = 4/48 (8%) Query: 251 FAYCKGSTLYFYGIVLASDGKIFHEVSRNGNRCDAINIGRDAAQYIRF 298 +A + + + DGKI + + G+ + R+ A+ ++ Sbjct: 314 YAVLRSGKIDLKVEI---DGKIVEKTVKTGSVSSY-KMAREVAEELKK 357 >gi|260832654|ref|XP_002611272.1| hypothetical protein BRAFLDRAFT_73331 [Branchiostoma floridae] gi|229296643|gb|EEN67282.1| hypothetical protein BRAFLDRAFT_73331 [Branchiostoma floridae] Length = 1508 Score = 36.3 bits (82), Expect = 6.2, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 7/85 (8%) Query: 15 LALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNR-----TLTEIGG-KGLFTEEI 68 L+ + R L +I I L + GD + L E G +++ + Sbjct: 23 LSSVQSEYVRE-LQKAMAEADLSIEIEALKSLGDVFLEKGRNSGDLAEFGKAHSVYSVAL 81 Query: 69 EKKLISGEIDCAVHSAKDMPTKLLK 93 + G++ +H K T + K Sbjct: 82 TRCTHIGQVQTLLHRVKYARTFIDK 106 >gi|12045059|ref|NP_072869.1| Ser/Thr protein phosphatase family protein [Mycoplasma genitalium G37] gi|255660208|ref|ZP_05405617.1| Ser/Thr protein phosphatase family protein [Mycoplasma genitalium G37] gi|11377624|pir||H64222 VPS29-like phosphoesterase-related protein MG207 [similarity] - Mycoplasma genitalium gi|3844805|gb|AAC71425.1| Ser/Thr protein phosphatase family protein [Mycoplasma genitalium G37] gi|166078656|gb|ABY79274.1| Ser/Thr protein phosphatase family protein [synthetic Mycoplasma genitalium JCVI-1.0] Length = 167 Score = 35.9 bits (81), Expect = 7.1, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 48/153 (31%), Gaps = 11/153 (7%) Query: 1 MEKKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVII---PLSTKGDRITNRTLTE 57 M+ K ++ L +A +++ +++I ++TK N T Sbjct: 1 MQNKLIKV------LVIADTHGQNQRWIELKNYHNPDVIIHAGDHMTTKQFMDQNATFWV 54 Query: 58 IGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQS 117 G EIE + +H + L K Q+ ++ DV I + Sbjct: 55 AGNNDSIGNEIEIFQLGQINFVLMHGHQAPRDNLKKWYQLLVLKAQQYPCDVLIFGHSHI 114 Query: 118 LKDLALHSVIGTSSLRRKALLLRWRSDISVIDF 150 ++ + + L R +++ Sbjct: 115 EYTNKINMIQLINPG--SLQLPRNQTNTPSYCT 145 >gi|109940312|sp|Q5E968|CATK_BOVIN RecName: Full=Cathepsin K; Flags: Precursor Length = 329 Score = 35.9 bits (81), Expect = 7.3, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 12/168 (7%) Query: 45 TKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKL--LKGLQISAYLP 102 +KGD I+ R + E K + +E L + A++ DM ++ K + Sbjct: 39 SKGDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPAS 98 Query: 103 REDIRDVFISHTAQ--SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK 160 R D + + + + ++ + + SV G+++ + K Sbjct: 99 RSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGK 158 Query: 161 L----NNNKAHAILL--AYAG--IKRLKKEKVIKEILNIEDFPPSPGQ 200 L N + G + + ++ ED P GQ Sbjct: 159 LLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQ 206 >gi|77735825|ref|NP_001029607.1| cathepsin K [Bos taurus] gi|59858469|gb|AAX09069.1| cathepsin K preproprotein [Bos taurus] gi|83638771|gb|AAI09854.1| Cathepsin K [Bos taurus] gi|296489554|gb|DAA31667.1| cathepsin K [Bos taurus] Length = 334 Score = 35.9 bits (81), Expect = 7.6, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 12/168 (7%) Query: 45 TKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAVHSAKDMPTKL--LKGLQISAYLP 102 +KGD I+ R + E K + +E L + A++ DM ++ K + Sbjct: 44 SKGDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPAS 103 Query: 103 REDIRDVFISHTAQ--SLKDLALHSVIGTSSLRRKALLLRWRSDISVIDFRGKIETRLNK 160 R D + + + + ++ + + SV G+++ + K Sbjct: 104 RSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGK 163 Query: 161 L----NNNKAHAILL--AYAG--IKRLKKEKVIKEILNIEDFPPSPGQ 200 L N + G + + ++ ED P GQ Sbjct: 164 LLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQ 211 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.314 0.126 0.341 Lambda K H 0.267 0.0383 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,137,203,588 Number of Sequences: 14124377 Number of extensions: 83818755 Number of successful extensions: 269382 Number of sequences better than 10.0: 2241 Number of HSP's better than 10.0 without gapping: 2208 Number of HSP's successfully gapped in prelim test: 33 Number of HSP's that attempted gapping in prelim test: 262049 Number of HSP's gapped (non-prelim): 2384 length of query: 307 length of database: 4,842,793,630 effective HSP length: 138 effective length of query: 169 effective length of database: 2,893,629,604 effective search space: 489023403076 effective search space used: 489023403076 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 80 (35.5 bits)