HHsearch alignment of GI: 254781038 and MMDB domain: 1z6r_A_83-194
>1z6r_A (A:83-194) MLC protein; transcriptional repressor, ROK family protein, DNA binding protein, helix-turn-helix, phosphotransferase system, metalloprotein; 2.70A {Escherichia coli}
Probab=93.48 E-value=0.25 Score=28.77 Aligned_cols=99 Identities=18% Similarity=0.181 Sum_probs=72.4
Q ss_pred CCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 84688750260220778873388884189887311334621218714559999999969999999999838982245368
Q gi|254781038|r 5 KKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSI 84 (363)
Q Consensus 5 ~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~I 84 (363)
..++||||=.-..+.++++ |.+++++............. .-.+.+..++++++++.+++...+-+|
T Consensus 2 ~~~~igidig~t~i~~~l~---d~~g~ii~~~~~~~~~~~~~-----------~~~~~i~~~i~~~~~~~~~~~~~i~gi 67 (112)
T 1z6r_A 2 AWHYLSLRISRGEIFLALR---DLSSKLVVEESQELALKDDL-----------PLLDRIISHIDQFFIRHQKKLERLTSI 67 (112)
T ss_dssp TCEEEEEEEETTEEEEEEE---ETTCCEEEEEEEECCSSCSS-----------CHHHHHHHHHHHHHHHTGGGCCCEEEE
T ss_pred CCEEEEEEECCCEEEEEEE---CCCCCEEEEEEEECCCCCHH-----------HHHHHHHHHHHHHHHHCCCCCCCEEEE
T ss_conf 7789999988988999998---79998899999842568807-----------999999999999999725544560079
Q ss_pred EECC-CC-----C---HHHHH--HHHHHHHHHHHHHHCCCCCCC
Q ss_conf 7406-64-----3---01256--779999999887514864333
Q gi|254781038|r 85 AVTA-GP-----G---LMGGL--IVGLMTAKAISYVSHKPFYAI 117 (363)
Q Consensus 85 avt~-gP-----G---~~~~L--~vG~~~Ak~la~~~~~Pli~V 117 (363)
+++. |+ | ..+-+ .-+...++.|...+++|++=.
T Consensus 68 gi~~~g~vd~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~Pv~i~ 111 (112)
T 1z6r_A 68 AITLPGIIDTENGIVHRXPFYEDVKEXPLGEALEQHTGVPVYIQ 111 (112)
T ss_dssp EEEESSEEETTTTEEEECTTCTTCSSBCHHHHHHHHHSSCEEEE
T ss_pred EEECCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCC
T ss_conf 84023356778776954588654457736889876540122235