HHsearch results for GI: 254781038 and protein with PDBid: 1hjr_A

>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=95.64  E-value=0.11  Score=30.11  Aligned_cols=103  Identities=10%  Similarity=0.143  Sum_probs=58.2

Q ss_pred             EEEEEECCCHHHEEEEEECCCCCCEEEEE-EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf             68875026022077887338888418988-73113346212187145599999999699999999998389822453687
Q gi|254781038|r    7 TVIGIETSCDETAVAVVRRKDSHGEILAE-AVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA   85 (363)
Q Consensus         7 ~ILgIETScd~tsvaiv~~~~~~~~il~~-~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia   85 (363)
                      +|||||-|-..|+.||++.++...+++.. .+.+..+.+          .  +....|-.-+.+.+++.+.+.--+..+.
T Consensus         2 iILGiDPgl~~tG~avid~~~~~~~~i~~g~i~t~~~~~----------~--~Rl~~I~~~l~~ii~~~~pd~vaiE~~f   69 (158)
T 1hjr_A            2 IILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDL----------P--SRLKLIYAGVTEIITQFQPDYFAIEQVF   69 (158)
T ss_dssp             EEEEEECCSSEEEEEEEEEETTEEEEEEEEEEECCCSCH----------H--HHHHHHHHHHHHHHHHHCCSEEEEEECC
T ss_pred             EEEEECCCCCCEEEEEEEEECCEEEEEEEEEEECCCCCH----------H--HHHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf             899984355856899999539878999866897799887----------9--9999999999999971397353698988


Q ss_pred             ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf             406643012567799999998875148643330367
Q gi|254781038|r   86 VTAGPGLMGGLIVGLMTAKAISYVSHKPFYAINHLE  121 (363)
Q Consensus        86 vt~gPG~~~~L~vG~~~Ak~la~~~~~Pli~VnH~~  121 (363)
                      +...+...-.+.--.......++..++|++.+.-.+
T Consensus        70 ~~~n~~sa~~l~~a~G~i~~~~~~~~i~i~~~~P~~  105 (158)
T 1hjr_A           70 MAKNADSALKLGQARGVAIVAAVNQELPVFEYAARQ  105 (158)
T ss_dssp             CCCCTTTHHHHHHHHHHHHHHHHTTTCCEEEEEHHH
T ss_pred             HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
T ss_conf             623888999999999999999998599601368899