HHsearch results for GI: 254781038 and protein with PDBid: 2aa4_A
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=97.75 E-value=0.0032 Score=40.87 Aligned_cols=253 Identities=16% Similarity=0.146 Sum_probs=122.8
Q ss_pred CEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 46887502602207788733888841898873113346212187145599999999699999999998389822453687
Q gi|254781038|r 6 KTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA 85 (363)
Q Consensus 6 ~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia 85 (363)
|+|||||----.|.++++ |.+++++....... ..+ .+.+.+...+.+.+++.. .+++.|+
T Consensus 1 m~~igiD~GGT~~~~~l~---d~~G~il~~~~~~~-~~~-------------~~~~~i~~~i~~~~~~~~---~~~~~ig 60 (289)
T 2aa4_A 1 MTTLAIDIGGTKLAAALI---GADGQIRDRRELPT-PAS-------------QTPEALRDALSALVSPLQ---AHAQRVA 60 (289)
T ss_dssp CCEEEEEECSSEEEEEEE---CTTCCEEEEEEEEC-CSS-------------CCHHHHHHHHHHHHTTTG---GGCSEEE
T ss_pred CCEEEEEECCCCEEEEEE---CCCCCEEEEEEEEC-CCC-------------CCHHHHHHHHHHHHHHHH---HHCCEEE
T ss_conf 969999988003899999---79996999999978-988-------------789999999999999988---6558469
Q ss_pred ECCCCCHH----------HHH--HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC-CCCCCEEEEEECCCEEEEEE
Q ss_conf 40664301----------256--779999999887514864333036776530132256-79984399970687479998
Q gi|254781038|r 86 VTAGPGLM----------GGL--IVGLMTAKAISYVSHKPFYAINHLEGHILTARLTDD-IAFPYLVLLVSGGHTQILLV 152 (363)
Q Consensus 86 vt~gPG~~----------~~L--~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~l~~~-~~~PfL~LlvSGGhT~l~~~ 152 (363)
++. ||.+ +.+ ..+...++.|...+++|++=.|+..+.++.-..... ...-|+.+.+++|-.--+..
T Consensus 61 Ia~-~G~v~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pv~v~nd~~a~~~~e~~~~~~~~~~~~~~~~~~~~g~~~~~ 139 (289)
T 2aa4_A 61 IAS-TGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALDGDITDMVFITVSTGVGGGVVS 139 (289)
T ss_dssp EEE-SSEEETTEEECSSGGGGGGGTTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHHTSCTTCCCEEEEEESSSEEEEEEE
T ss_pred EEE-CCCEEECCEEEECCCCCCHHCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEE
T ss_conf 970-6621211104742534211149946999999879999993658898888887535886269999956887624775
Q ss_pred CCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCHHH--------HHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCHHHHH
Q ss_conf 375643000223363002388889885288761035--------566655405733345861110688754221024589
Q gi|254781038|r 153 RDVAHYDRLGTTIDDALGECFDKIAKSLGLPYPGGV--------EIEKAALMGDGKRFKFPCPLVQGTLCDFSFSGLKTS 224 (363)
Q Consensus 153 ~~~~~~~ilg~T~Dda~Ge~~DK~ar~Lgl~yPgGp--------~ie~~A~~g~~~~~~~P~p~~~~~~~dFSFSGLkTa 224 (363)
++... .| ....+||. +.++ + .|.++ .+|.++ |..+|...
T Consensus 140 ~g~~~---~g--~~~~~ge~----g~~~-~-~~~~~~~~~g~~g~le~~~----------------------S~~~l~~~ 186 (289)
T 2aa4_A 140 GCKLL---TG--PGGLAGHI----GHTL-A-DPHGPVCGCGRTGCVEAIA----------------------SGRGIAAA 186 (289)
T ss_dssp TTEEE---CC--TTSCCCCG----GGSB-S-CTTSCBCTTSCBSBHHHHH----------------------SHHHHHHT
T ss_pred ECCEE---CC--CCCCCCEE----EEEE-E-CCCCCCCCCCCCCCCHHCC----------------------CHHHHHHH
T ss_conf 06444---15--76545454----6446-5-5899857788878700013----------------------39999999
Q ss_pred H---------HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHH
Q ss_conf 9---------9999851120121068899999999999999999999999876214455236541334587999999999
Q gi|254781038|r 225 V---------QKTICAFDVLEKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLID 295 (363)
Q Consensus 225 v---------~~~i~~~~~~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~ 295 (363)
. ....+..+..+ ..|...-+...+.|..-+...+..+ .+..++++||++.+..+.+.+++
T Consensus 187 ~~~~~~~~~~~~l~~~~~~gd-----~~a~~i~~~~~~~la~~i~~l~~~~------~p~~Ivl~G~i~~~~~~~~~~~~ 255 (289)
T 2aa4_A 187 AQGELAGADAKTIFTRAGQGD-----EQAQQLIHRSARTLARLIADIKATT------DCQCVVVGGSVGLAEGYLALVET 255 (289)
T ss_dssp CCGGGTTCCHHHHHHHHHTTC-----HHHHHHHHHHHHHHHHHHHHHHHHH------CCSEEEEEHHHHTSTTHHHHHHH
T ss_pred HHHHHCCCCHHHHHHHHHCCC-----HHHHHHHHHHHHHHHHHHHHHHHHH------CCCEEEEECHHHCCHHHHHHHHH
T ss_conf 854432574056788876278-----7777779999999999999999986------98989997857626558999999
Q ss_pred HHHHC----CCEEEECCHHHCCCHHHHHHHHHHHH
Q ss_conf 99868----98899628788772589999999999
Q gi|254781038|r 296 LCVLH----GFRFVAPPARLCTDNAVMIAWAALER 326 (363)
Q Consensus 296 ~~~~~----~~~~~~P~~~~ctDNAaMIA~ag~~~ 326 (363)
...+. ..++..+. -.|+|..|+.+-+-+
T Consensus 256 ~l~~~~~~~~~~i~~s~---~~~~a~~iGAa~lA~ 287 (289)
T 2aa4_A 256 YLAQEPAAFHVDLLAAH---YRHDAGLLGAALLAQ 287 (289)
T ss_dssp HHTTSCGGGCCEEEECS---CSSCHHHHHHHHHHH
T ss_pred HHHHCCCCCCCEEEECC---CCCCHHHHHHHHHHC
T ss_conf 99844567898599558---899388999999876