HHsearch results for GI: 254781038 and protein with PDBid: 2aa4_A

>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=97.75  E-value=0.0032  Score=40.87  Aligned_cols=253  Identities=16%  Similarity=0.146  Sum_probs=122.8

Q ss_pred             CEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf             46887502602207788733888841898873113346212187145599999999699999999998389822453687
Q gi|254781038|r    6 KTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA   85 (363)
Q Consensus         6 ~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia   85 (363)
                      |+|||||----.|.++++   |.+++++....... ..+             .+.+.+...+.+.+++..   .+++.|+
T Consensus         1 m~~igiD~GGT~~~~~l~---d~~G~il~~~~~~~-~~~-------------~~~~~i~~~i~~~~~~~~---~~~~~ig   60 (289)
T 2aa4_A            1 MTTLAIDIGGTKLAAALI---GADGQIRDRRELPT-PAS-------------QTPEALRDALSALVSPLQ---AHAQRVA   60 (289)
T ss_dssp             CCEEEEEECSSEEEEEEE---CTTCCEEEEEEEEC-CSS-------------CCHHHHHHHHHHHHTTTG---GGCSEEE
T ss_pred             CCEEEEEECCCCEEEEEE---CCCCCEEEEEEEEC-CCC-------------CCHHHHHHHHHHHHHHHH---HHCCEEE
T ss_conf             969999988003899999---79996999999978-988-------------789999999999999988---6558469


Q ss_pred             ECCCCCHH----------HHH--HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC-CCCCCEEEEEECCCEEEEEE
Q ss_conf             40664301----------256--779999999887514864333036776530132256-79984399970687479998
Q gi|254781038|r   86 VTAGPGLM----------GGL--IVGLMTAKAISYVSHKPFYAINHLEGHILTARLTDD-IAFPYLVLLVSGGHTQILLV  152 (363)
Q Consensus        86 vt~gPG~~----------~~L--~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~l~~~-~~~PfL~LlvSGGhT~l~~~  152 (363)
                      ++. ||.+          +.+  ..+...++.|...+++|++=.|+..+.++.-..... ...-|+.+.+++|-.--+..
T Consensus        61 Ia~-~G~v~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pv~v~nd~~a~~~~e~~~~~~~~~~~~~~~~~~~~g~~~~~  139 (289)
T 2aa4_A           61 IAS-TGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALDGDITDMVFITVSTGVGGGVVS  139 (289)
T ss_dssp             EEE-SSEEETTEEECSSGGGGGGGTTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHHTSCTTCCCEEEEEESSSEEEEEEE
T ss_pred             EEE-CCCEEECCEEEECCCCCCHHCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEE
T ss_conf             970-6621211104742534211149946999999879999993658898888887535886269999956887624775


Q ss_pred             CCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCHHH--------HHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCHHHHH
Q ss_conf             375643000223363002388889885288761035--------566655405733345861110688754221024589
Q gi|254781038|r  153 RDVAHYDRLGTTIDDALGECFDKIAKSLGLPYPGGV--------EIEKAALMGDGKRFKFPCPLVQGTLCDFSFSGLKTS  224 (363)
Q Consensus       153 ~~~~~~~ilg~T~Dda~Ge~~DK~ar~Lgl~yPgGp--------~ie~~A~~g~~~~~~~P~p~~~~~~~dFSFSGLkTa  224 (363)
                      ++...   .|  ....+||.    +.++ + .|.++        .+|.++                      |..+|...
T Consensus       140 ~g~~~---~g--~~~~~ge~----g~~~-~-~~~~~~~~~g~~g~le~~~----------------------S~~~l~~~  186 (289)
T 2aa4_A          140 GCKLL---TG--PGGLAGHI----GHTL-A-DPHGPVCGCGRTGCVEAIA----------------------SGRGIAAA  186 (289)
T ss_dssp             TTEEE---CC--TTSCCCCG----GGSB-S-CTTSCBCTTSCBSBHHHHH----------------------SHHHHHHT
T ss_pred             ECCEE---CC--CCCCCCEE----EEEE-E-CCCCCCCCCCCCCCCHHCC----------------------CHHHHHHH
T ss_conf             06444---15--76545454----6446-5-5899857788878700013----------------------39999999


Q ss_pred             H---------HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHH
Q ss_conf             9---------9999851120121068899999999999999999999999876214455236541334587999999999
Q gi|254781038|r  225 V---------QKTICAFDVLEKQDIADICASFQVTVVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLID  295 (363)
Q Consensus       225 v---------~~~i~~~~~~~~~~~~diaasfQ~~i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~  295 (363)
                      .         ....+..+..+     ..|...-+...+.|..-+...+..+      .+..++++||++.+..+.+.+++
T Consensus       187 ~~~~~~~~~~~~l~~~~~~gd-----~~a~~i~~~~~~~la~~i~~l~~~~------~p~~Ivl~G~i~~~~~~~~~~~~  255 (289)
T 2aa4_A          187 AQGELAGADAKTIFTRAGQGD-----EQAQQLIHRSARTLARLIADIKATT------DCQCVVVGGSVGLAEGYLALVET  255 (289)
T ss_dssp             CCGGGTTCCHHHHHHHHHTTC-----HHHHHHHHHHHHHHHHHHHHHHHHH------CCSEEEEEHHHHTSTTHHHHHHH
T ss_pred             HHHHHCCCCHHHHHHHHHCCC-----HHHHHHHHHHHHHHHHHHHHHHHHH------CCCEEEEECHHHCCHHHHHHHHH
T ss_conf             854432574056788876278-----7777779999999999999999986------98989997857626558999999


Q ss_pred             HHHHC----CCEEEECCHHHCCCHHHHHHHHHHHH
Q ss_conf             99868----98899628788772589999999999
Q gi|254781038|r  296 LCVLH----GFRFVAPPARLCTDNAVMIAWAALER  326 (363)
Q Consensus       296 ~~~~~----~~~~~~P~~~~ctDNAaMIA~ag~~~  326 (363)
                      ...+.    ..++..+.   -.|+|..|+.+-+-+
T Consensus       256 ~l~~~~~~~~~~i~~s~---~~~~a~~iGAa~lA~  287 (289)
T 2aa4_A          256 YLAQEPAAFHVDLLAAH---YRHDAGLLGAALLAQ  287 (289)
T ss_dssp             HHTTSCGGGCCEEEECS---CSSCHHHHHHHHHHH
T ss_pred             HHHHCCCCCCCEEEECC---CCCCHHHHHHHHHHC
T ss_conf             99844567898599558---899388999999876