HHsearch results for GI: 254781038 and protein with PDBid: 2gup_A
>2gup_A ROK family protein; sugar kinase, APC80695, sucrose, structural genomics, PSI, protein structure initiative; HET: SUC; 2.01A {Streptococcus pneumoniae TIGR4} SCOP: c.55.1.10 c.55.1.10
Probab=97.35 E-value=0.011 Score=37.22 Aligned_cols=125 Identities=19% Similarity=0.243 Sum_probs=65.3
Q ss_pred CCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 84688750260220778873388884189887311334621218714559999999969999999999838982245368
Q gi|254781038|r 5 KKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSI 84 (363)
Q Consensus 5 ~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~I 84 (363)
-|.|||||==--.+.++++ |.+++++....... |+ +.+.+...+++.+.+ .++++|
T Consensus 3 ~~~~~~iDiGGT~ir~~l~---d~~g~ii~~~~~~t-----------~~-----~~~~~~~~i~~~~~~-----~~i~~I 58 (292)
T 2gup_A 3 AMTIATIDIGGTGIKFASL---TPDGKILDKTSIST-----------PE-----NLEDLLAWLDQRLSE-----QDYSGI 58 (292)
T ss_dssp -CCEEEEEEETTEEEEEEE---CTTCCEEEEEEECC-----------CS-----SHHHHHHHHHHHHTT-----SCCSEE
T ss_pred CCEEEEEEECCHHEEEEEE---CCCCCEEEEEEEEC-----------CC-----CHHHHHHHHHHHHHH-----CCCCEE
T ss_conf 8889999977024699999---18996999999728-----------76-----599999999998665-----278679
Q ss_pred EECC-CC-----CHH---HHH--HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEEC
Q ss_conf 7406-64-----301---256--779999999887514864333036776530132256799843999706874799983
Q gi|254781038|r 85 AVTA-GP-----GLM---GGL--IVGLMTAKAISYVSHKPFYAINHLEGHILTARLTDDIAFPYLVLLVSGGHTQILLVR 153 (363)
Q Consensus 85 avt~-gP-----G~~---~~L--~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~l~~~~~~PfL~LlvSGGhT~l~~~~ 153 (363)
+++. || |.. +.+ .-+... +.+...+++|++=.|...+-+++-.....-.-.++.+.++-|--.=+..+
T Consensus 59 gia~pG~vd~~~g~i~~~~~~~~~~~~~~-~~~~~~~~~pv~~~ND~~a~a~aE~~~~~~~~~~~~v~ig~GiG~g~~~~ 137 (292)
T 2gup_A 59 AMSVPGAVNQETGVIDGFSAVPYIHGFSW-YEALSSYQLPVHLENDANCVGLSELLAHPELENAACVVIGTGIGGAMIIN 137 (292)
T ss_dssp EEEESSEECTTTCBEESCCSSGGGSSSBH-HHHTGGGCCCEEEEEHHHHHHHHHHHHCTTCSSEEEEEESSSEEEEEEET
T ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCH-HHHHHHCCCCEEEECHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC
T ss_conf 99606752156672024333333357326-89998619949982167899899876266534214788626544300222
Q ss_pred C
Q ss_conf 7
Q gi|254781038|r 154 D 154 (363)
Q Consensus 154 ~ 154 (363)
+
T Consensus 138 g 138 (292)
T 2gup_A 138 G 138 (292)
T ss_dssp T
T ss_pred C
T ss_conf 2