HHsearch results for GI: 254781038 and protein with PDBid: 2zf5_O
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, glycerol metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis KOD1}
Probab=97.15 E-value=0.017 Score=35.83 Aligned_cols=288 Identities=15% Similarity=0.118 Sum_probs=142.3
Q ss_pred CCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
Q ss_conf 88468875026022077887338888418988731133462121871455999999996999999999983898224536
Q gi|254781038|r 4 IKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDS 83 (363)
Q Consensus 4 ~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~ 83 (363)
|+++|||||-..-..-++++ |.++++++.........+.+-|.+-.. ...--+.+...+++++++++++..+|.+
T Consensus 1 M~ky~lgIDiGTss~Ka~l~---d~~g~~~~~~~~~~~~~~~~~g~~Eqd--~~~~w~~~~~~~~~~~~~~~~~~~~I~a 75 (497)
T 2zf5_O 1 MEKFVLSLDEGTTSARAIIF---DRESNIHGIGQYEFPQHYPRPGWVEHN--PEEIWDAQLRAIKDAIQSARIEPNQIAA 75 (497)
T ss_dssp CCCEEEEEEECSSEEEEEEE---CTTCCEEEEEEEECCCBCCSTTCCEEC--HHHHHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred CCCEEEEEECCCCCEEEEEE---ECCCCEEEEEEEECCCCCCCCCCEEEC--HHHHHHHHHHHHHHHHHHCCCCCCCEEE
T ss_conf 99389999802535276699---588999999999776226899828999--9999999999999999975989312799
Q ss_pred EEECCC-CCHHHH----------------------HHHHH------------------HHHHHHHHHHCCC---------
Q ss_conf 874066-430125----------------------67799------------------9999988751486---------
Q gi|254781038|r 84 IAVTAG-PGLMGG----------------------LIVGL------------------MTAKAISYVSHKP--------- 113 (363)
Q Consensus 84 Iavt~g-PG~~~~----------------------L~vG~------------------~~Ak~la~~~~~P--------- 113 (363)
|+++.- .+.... -.... +.+|-+-+.-+.|
T Consensus 76 I~is~~~~~~v~lD~~g~pl~~~i~w~D~r~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~ 155 (497)
T 2zf5_O 76 IGVTNQRETTLVWDKDGKPLYNAIVWQCRRTAEMVEEIKREYGTMIKEKTGLVPDAYFSASKLKWLLDNVPGLREKAEKG 155 (497)
T ss_dssp EEEEECSSCEEEECTTCCBSSCEECTTCCTTHHHHHHHHHHHHHHHHHHHSSCCCTTSHHHHHHHHHHHSTTHHHHHHTT
T ss_pred EEEECCCCCEEEECCCCCEEECHHHCCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHC
T ss_conf 99935678889998999881320211343105679998751113566423883472429999999986498899999705
Q ss_pred ---CCCCHHHHHHHHCCCCCC-----------------------------------------------------------
Q ss_conf ---433303677653013225-----------------------------------------------------------
Q gi|254781038|r 114 ---FYAINHLEGHILTARLTD----------------------------------------------------------- 131 (363)
Q Consensus 114 ---li~VnH~~aH~~~~~l~~----------------------------------------------------------- 131 (363)
+..+.--..+.|++.+..
T Consensus 156 ~~~~~~~~d~l~~~LTG~~~~d~s~As~t~l~d~~~~~W~~ell~~~gi~~~~lP~i~~~g~~~G~v~~~~l~~~~pV~~ 235 (497)
T 2zf5_O 156 EVMFGTVDTFLIYRLTGEHVTDYSNASRTMLFNIKKLDWDDELLELFDIPESVLPEVRESSEVYGYTKKELLGAEIPVSG 235 (497)
T ss_dssp CCEEEEHHHHHHHHHHSCCEEEHHHHTTSSSEETTTTEECHHHHHHTTCCGGGCCEEECSEEEEEECCHHHHSSCCEEEE
T ss_pred CEEECCHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCEECCHHHCCCCCEEEE
T ss_conf 71130776999998639964443165423355388788749999871999788898635765313126646699987997
Q ss_pred ------------CCCCCCEEEEEECCCEEEEEECCCC-----C---------------CEECCCCCCCCHHHHHHHHHHH
Q ss_conf ------------6799843999706874799983756-----4---------------3000223363002388889885
Q gi|254781038|r 132 ------------DIAFPYLVLLVSGGHTQILLVRDVA-----H---------------YDRLGTTIDDALGECFDKIAKS 179 (363)
Q Consensus 132 ------------~~~~PfL~LlvSGGhT~l~~~~~~~-----~---------------~~ilg~T~Dda~Ge~~DK~ar~ 179 (363)
....|- .+.+|.|++..+.+.... + |-+.|. =...|-+++-+...
T Consensus 236 g~~D~~aa~~g~g~~~~g-~~~~~~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~G~~~~w~~~~ 312 (497)
T 2zf5_O 236 DAGDQQAALFGQAAFEAG-MVKATYGTGSFILVNTDKMVLYSDNLLTTIAWGLNGRVSYALEGS--IFVTGAAVQWLRDG 312 (497)
T ss_dssp EEEHHHHHHHHTTCCSTT-CEEEEESSSEEEEEEEETCCCCCTTSEEEEEEEETTEEEEEEEEE--ESCSHHHHHHHHHT
T ss_pred ECCHHHHHHHHCCCCCCC-CEEEEECCCEEEEEECCCCCCCCCCCEEEECCCCCCCCHHHHHHH--HHHHHHHHHHHHHH
T ss_conf 060488987502578899-436763564599995697301676645641045798624263889--99999999999986
Q ss_pred CCCCCCHHHHHHHHHHHCCC--CCCCCCCHHCCCC-------CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 28876103556665540573--3345861110688-------75422102458999999851120121068899999999
Q gi|254781038|r 180 LGLPYPGGVEIEKAALMGDG--KRFKFPCPLVQGT-------LCDFSFSGLKTSVQKTICAFDVLEKQDIADICASFQVT 250 (363)
Q Consensus 180 Lgl~yPgGp~ie~~A~~g~~--~~~~~P~p~~~~~-------~~dFSFSGLkTav~~~i~~~~~~~~~~~~diaasfQ~~ 250 (363)
++.... -...+.++..-.. .-+-+|. ..+. ...=+|.||. ...+..++..++.+.
T Consensus 313 ~~~~~~-~~~~~~~a~~~~~~~gl~~~P~--~~G~r~P~~d~~~rg~~~Gl~-------------~~~~~~~l~ravlEg 376 (497)
T 2zf5_O 313 IKIIKH-ASETEELATKLESNEGVYFVPA--FVGLGAPYWDQFARGIIIGIT-------------RGTGREHLARATLEA 376 (497)
T ss_dssp SCCCSC-GGGHHHHHTTSSSCTTCEEECC--TTCBCTTTCBTTCCEEEEEEC-------------TTCCHHHHHHHHHHH
T ss_pred CCCCCH-HHHHHHHHHCCCCCCCEEEECC--CCCCCCCCCCCCCCEEEECCC-------------CCCCHHHHHHHHHHH
T ss_conf 065530-6689999824679997598388--777678777845670675689-------------999989999999860
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCH-HHCCCHHHHHHHHHH
Q ss_conf 99999999999999987621445523654133458799999999999868988996287-887725899999999
Q gi|254781038|r 251 VVRILQARLKQGFLLFRKAFPHKQAVLVVSGGVASNHFIRASLIDLCVLHGFRFVAPPA-RLCTDNAVMIAWAAL 324 (363)
Q Consensus 251 i~~~L~~k~~~a~~~~~~~~~~~~~~lvv~GGVaaN~~LR~~l~~~~~~~~~~~~~P~~-~~ctDNAaMIA~ag~ 324 (363)
++-.+ +..++..++ ...++.|.++||.+.|..+++.+.+.+ |.++..++. +-..=-|||+|..|.
T Consensus 377 ia~~~----~~~~~~l~~--~~~~~~i~~~GGga~n~~~~Qi~Adv~---g~pV~~~~~~ea~a~GaA~lA~~a~ 442 (497)
T 2zf5_O 377 IAYLT----RDVVDEMEK--LVQIKELRVDGGATANDFLMQFQADIL---NRKVIRPVVKETTALGAAYLAGLAV 442 (497)
T ss_dssp HHHHH----HHHHHHHTT--TSCCCCEEEESGGGGCHHHHHHHHHHH---TSCEEEESCSCHHHHHHHHHHHHHT
T ss_pred HHHHH----HHHHHHHHH--CCCCCEEEEECCCHHCHHHHHHHHHHH---CCCEEECCCCCHHHHHHHHHHHHHC
T ss_conf 89999----999999983--479876999658034689999999997---9905977988679999999999974