HHsearch results for GI: 254781038 and protein with PDBid: 3htv_A
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=95.17 E-value=0.19 Score=28.66 Aligned_cols=137 Identities=13% Similarity=0.120 Sum_probs=77.6
Q ss_pred CCCCCCEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 98888468875026022077887338888418988731133462121871455999999996999999999983898224
Q gi|254781038|r 1 MSKIKKTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISD 80 (363)
Q Consensus 1 m~~~~~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~ 80 (363)
|.+....|+|||=....+-++++ |.+++++........... .+ .-.+.+..++++.+++.+ .+
T Consensus 2 ~~~~~~~v~GIDiGgt~i~~~l~---d~~g~i~~~~~~~~~~~~------~~-----~~~~~i~~~i~~~~~~~~---~~ 64 (310)
T 3htv_A 2 MQKQHNVVAGVDMGATHIRFCLR---TAEGETLHCEKKRTAEVI------AP-----GLVSGIGEMIDEQLRRFN---AR 64 (310)
T ss_dssp --CCEEEEEEEEECSSEEEEEEE---ETTSCEEEEEEEEHHHHH------TT-----CHHHHHHHHHHHHHHHHT---EE
T ss_pred CCCCCCEEEEEEECCCEEEEEEE---CCCCCEEEEEEECCCCCC------HH-----HHHHHHHHHHHHHHHHCC---CC
T ss_conf 98889899999976667999999---299989999996188878------89-----999999999999998759---97
Q ss_pred CCEEEECC-CC-----C--H-HHHH----HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCC-CCCEEEEEECCC
Q ss_conf 53687406-64-----3--0-1256----77999999988751486433303677653013225679-984399970687
Q gi|254781038|r 81 MDSIAVTA-GP-----G--L-MGGL----IVGLMTAKAISYVSHKPFYAINHLEGHILTARLTDDIA-FPYLVLLVSGGH 146 (363)
Q Consensus 81 id~Iavt~-gP-----G--~-~~~L----~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~~~l~~~~~-~PfL~LlvSGGh 146 (363)
+.+|+++. || | . .+.| ..+...++.|...+++|++=.|...+=++.-.+..... -.|+.+.++-|=
T Consensus 65 i~gIgia~pG~vd~~~g~v~~~~~~~~~~~~~~~l~~~l~~~~~~pv~i~ND~~aaa~~e~~~~~~~~~~~~~i~~gtGi 144 (310)
T 3htv_A 65 CHGLVMGFPALVSKDKRTIISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTGM 144 (310)
T ss_dssp EEEEEEEESSCBCTTSSCBCSCCSSSCCHHHHTTHHHHHHHHHTSCEEEEEHHHHHHHHHHHHTTCTTSCEEEEEESSSE
T ss_pred CCEEEEEECCEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCEEEEEEECCCC
T ss_conf 30799982630867998499568778644447767999878629857995537777776654034546659999846713
Q ss_pred EEEEEECC
Q ss_conf 47999837
Q gi|254781038|r 147 TQILLVRD 154 (363)
Q Consensus 147 T~l~~~~~ 154 (363)
-.=+..++
T Consensus 145 G~gii~~g 152 (310)
T 3htv_A 145 GFAVWMNG 152 (310)
T ss_dssp EEEEEETT
T ss_pred CCCCCCCC
T ss_conf 55413478