HHSEARCH alignment of GI: 254781038 and SCOP domain: d1z6ra2

Alignment
>d1z6ra2 c.55.1.10 (A:82-210) Mlc protein {Escherichia coli [TaxId: 562]}
Probab=91.65  E-value=0.29  Score=25.72  Aligned_cols=106  Identities=17%  Similarity=0.221  Sum_probs=75.2

Q ss_pred             CEEEEEECCCHHHEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf             46887502602207788733888841898873113346212187145599999999699999999998389822453687
Q gi|254781038|r    6 KTVIGIETSCDETAVAVVRRKDSHGEILAEAVLSQIDQHGHYGGVVPEVAARAHVDVLDILIKQTLLRANMQISDMDSIA   85 (363)
Q Consensus         6 ~~ILgIETScd~tsvaiv~~~~~~~~il~~~~~sq~~~~~~~GGv~P~~A~~~H~~~l~~li~~~l~~a~~~~~~id~Ia   85 (363)
                      -.+||||=+-+..+++++   |.+|+++.+........       .|+    .-.+.+...+++.+.+.+.+..++-+|+
T Consensus         4 ~~~l~i~i~~~~i~~~l~---Dl~G~~l~~~~~~~~~~-------~~~----~~~~~l~~~i~~~l~~~~~~~~~i~gIg   69 (129)
T d1z6ra2           4 WHYLSLRISRGEIFLALR---DLSSKLVVEESQELALK-------DDL----PLLDRIISHIDQFFIRHQKKLERLTSIA   69 (129)
T ss_dssp             CEEEEEEEETTEEEEEEE---ETTCCEEEEEEEECCSS-------CSS----CHHHHHHHHHHHHHHHTGGGCCCEEEEE
T ss_pred             EEEEEEEECCCEEEEEEE---CCCCCEEEEEEEECCCC-------CHH----HHHHHHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf             599999989999999999---59999887877402455-------446----8999999999999985375433303688


Q ss_pred             ECCCCCHH----------HHH--HHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
Q ss_conf             40664301----------256--779999999887514864333036776530
Q gi|254781038|r   86 VTAGPGLM----------GGL--IVGLMTAKAISYVSHKPFYAINHLEGHILT  126 (363)
Q Consensus        86 vt~gPG~~----------~~L--~vG~~~Ak~la~~~~~Pli~VnH~~aH~~~  126 (363)
                      ++. ||.+          +-+  .-++...+-|...+++|++=.|...+=+++
T Consensus        70 i~~-pG~v~~~~~~~~~~~~~~~w~~~~l~~~l~~~~~~pV~~~NDa~a~ala  121 (129)
T d1z6ra2          70 ITL-PGIIDTENGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMA  121 (129)
T ss_dssp             EEE-SSEEETTTTEEEECTTCTTCSSBCHHHHHHHHHSSCEEEEEHHHHHHHH
T ss_pred             EEE-EEEEEECCCCEECCCCCHHCCCCCHHHHHHHHCCCCEEEEEHHHHHHHH
T ss_conf             733-1126640460304676111058336999998619989998648899999


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: ROK
domain: Mlc protein
species: Escherichia coli [TaxId: 562]