HHsearch alignment for GI: 254781039 and conserved domain: COG1748

Probab=98.03  E-value=0.00011  Score=50.17  Aligned_cols=85  Identities=20%  Similarity=0.228  Sum_probs=62.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEE---CHHHHHHHHHHHC
Q ss_conf             8779997788789999999997799818999449899999997789842279881787438973---1687755554411
Q gi|254781039|r    4 YSTIFVIGAGAFGTALSSVIASRGLANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSS---DHTLLQNADIVLF   80 (329)
Q Consensus         4 ~~kI~ViGaGa~GtAlA~~La~~g~~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~---~~~~l~~adiIii   80 (329)
T Consensus         1 m~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~-----~~v~~-~~vD~~d~~al~~li~~~d~VIn   74 (389)
T COG1748           1 MMKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG-----GKVEA-LQVDAADVDALVALIKDFDLVIN   74 (389)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCC-----CCCEE-EEECCCCHHHHHHHHHCCCEEEE
T ss_conf             9728998986667999999985789629998488889999875334-----66316-99425675889998725778999


Q ss_pred             CCCHHHHHHHHHHH
Q ss_conf             22177766655553
Q gi|254781039|r   81 ATSSKGYGEALNFY   94 (329)
Q Consensus        81 avps~~~~~~l~~i   94 (329)
T Consensus        75 ~~p~~~~~~i~ka~   88 (389)
T COG1748          75 AAPPFVDLTILKAC   88 (389)
T ss_pred             ECCCHHHHHHHHHH
T ss_conf             28705429999999