HHsearch alignment for GI: 254781039 and conserved domain: KOG0409
>KOG0409 consensus.
Probab=99.01 E-value=2.7e-08 Score=73.63 Aligned_cols=270 Identities=14% Similarity=0.123 Sum_probs=161.5
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCC
Q ss_conf 87799977887899999999977998189994498999999977898422798817874389731687755554411221
Q gi|254781039|r 4 YSTIFVIGAGAFGTALSSVIASRGLANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSSDHTLLQNADIVLFATS 83 (329)
Q Consensus 4 ~~kI~ViGaGa~GtAlA~~La~~g~~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~~~~l~~adiIiiavp 83 (329)
T Consensus 35 ~~~iGFIGLG~MG~~M~~nLik~G-~kVtV~dr~~~k~~~f~~~Ga~v-------------~~sPaeVae~sDvvitmv~ 100 (327)
T KOG0409 35 KTRIGFIGLGNMGSAMVSNLIKAG-YKVTVYDRTKDKCKEFQEAGARV-------------ANSPAEVAEDSDVVITMVP 100 (327)
T ss_pred CCEEEEEEECCCHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHCHHH-------------HCCHHHHHHHCCEEEEECC
T ss_conf 551357743411189999999759-87999958678878999705014-------------0797999863688999768
Q ss_pred HH-HHHHHHHHHHHHCC---CCCCEEECCCCCCCCCCC--CCCHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 77-76665555332035---685055237520002585--4310123321001210012888178998765321246773
Q gi|254781039|r 84 SK-GYGEALNFYSNWLK---ESAEIIICSKGFEYNSGM--LLSSYSEKVLPSHSISVLSGPGFARDIAQGLPVGVILSSK 157 (329)
Q Consensus 84 s~-~~~~~l~~i~~~l~---~~~~ii~~sKGi~~~t~~--~~se~i~~~~~~~~~~vlsGPs~A~Eia~~~pt~~~ia~~ 157 (329)
T Consensus 101 ~~~~v~~v~~g~~Gvl~g~~~g~~~~-----vDmSTidp~~s~ei~-~~i~~~~~~~vDAPVSGg~~~A~~G~LtimagG 174 (327)
T KOG0409 101 NPKDVKDVLLGKSGVLSGIRPGKKAT-----VDMSTIDPDTSLEIA-KAISNKGGRFVDAPVSGGVKGAEEGTLTIMAGG 174 (327)
T ss_pred CHHHHHHHHCCCCCCEEECCCCCCEE-----EECCCCCHHHHHHHH-HHHHHCCCEEEECCCCCCCHHHHCCEEEEEECC
T ss_conf 80766888407786235215888347-----762446878899999-999747986985666677013333728999468
Q ss_pred HHHHHHHHHHHHCCCC-EEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf 1789999997534111-389973886144440002567788997521100380578999999899999999872254455
Q gi|254781039|r 158 NIDISRRLSKILTTDS-FRVYCSDDRIGVQIGGALKNVIAIASGILKGRGCGDSARAIVMVQGLSEIMKLTEAMNGRADT 236 (329)
Q Consensus 158 d~~~~~~i~~~~~~~~-~~~~~s~D~~GvE~~galKNv~AIa~Gi~~gl~~g~N~~aal~~~g~~Em~~l~~~~g~~~~t 236 (329)
T Consensus 175 de~~~~~~~~~~~~mGk~~~~----------~G--------~~GnG~~~Kl~nnm~~g~~M~g~aEal~la~r~GLd~~~ 236 (327)
T KOG0409 175 DEALFEAASPVFKLMGKNVVF----------LG--------GVGNGQAAKLCNNMLLGSSMVGLAEALALADRLGLDAKK 236 (327)
T ss_pred CHHHHHHHHHHHHHHCCEEEE----------EC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 699999889999973251898----------34--------657517889999999999999999999999980898999
Q ss_pred HHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCHHCCCEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHH-------H
Q ss_conf 320023210157764477530067877508907025729600319999999999998289871599999998-------0
Q gi|254781039|r 237 ILRLSGVGDLILTATSEQSRNFCFGIALGRGEKQNPDQIQLVEGAIAVSCVINISKKMGLKLPIFQAISDVM-------M 309 (329)
Q Consensus 237 ~~glaG~GDl~~T~~s~~SRN~~~G~~lg~g~~~~~~~~~~vEG~~~~~~i~~l~~~~~~~~Pi~~~v~~il-------~ 309 (329)
T Consensus 237 l~eiln~----G~~~S~~~~~--~~p~m~k~dy-~p~f~-~~~m~KDLgla~~~a~~~~~~~P~~slA~qly~~~~a~G~ 308 (327)
T KOG0409 237 LLEILNT----GRCWSSMFYN--PVPGMLKGDY-NPGFA-LKLMVKDLGLALNAAESVKVPMPLGSLAHQLYKSMKALGY 308 (327)
T ss_pred HHHHHHC----CCCCCHHHHC--CCCHHHCCCC-CCCCH-HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 9999735----7756677757--5860103778-98614-8999988899997664048988467899999999985688
Q ss_pred CCCCHHHHHH
Q ss_conf 7899899999
Q gi|254781039|r 310 NHISVDEALS 319 (329)
Q Consensus 310 ~~~~~~~~i~ 319 (329)
T Consensus 309 g~~Dfs~V~~ 318 (327)
T KOG0409 309 GDKDFSAVYR 318 (327)
T ss_pred CCCCCHHHHH
T ss_conf 7666078999