HHsearch alignment for GI: 254781039 and conserved domain: PRK04308
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=95.00 E-value=0.044 Score=33.22 Aligned_cols=41 Identities=22% Similarity=0.344 Sum_probs=33.0
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCH--HHHHHHHH
Q ss_conf 7799977887899999999977998189994498--99999997
Q gi|254781039|r 5 STIFVIGAGAFGTALSSVIASRGLANVTLLGRKE--ILMQQLED 46 (329)
Q Consensus 5 ~kI~ViGaGa~GtAlA~~La~~g~~~V~l~~r~~--~~~~~i~~ 46 (329)
T Consensus 6 k~v~viGlG~sG~s~a~~L~~~G-~~v~~~D~~~~~~~~~~~~~ 48 (445)
T PRK04308 6 KKILVAGLGGTGISMIAYLRKNG-AEVAAYDAELKAERVAQIGK 48 (445)
T ss_pred CEEEEEEECHHHHHHHHHHHHCC-CEEEEEECCCCCCHHHHHHH
T ss_conf 98999998999999999999789-91999979999531899974