HHsearch alignment for GI: 254781039 and conserved domain: PRK05442

Probab=97.19  E-value=0.0011  Score=43.75  Aligned_cols=106  Identities=17%  Similarity=0.191  Sum_probs=66.2

Q ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCC---C-C--EEEEEECCHHH--HHHHH--HCCCCCCCCCCCCCCCCEEEEEC-
Q ss_conf             98887799977-8878999999999779---9-8--18999449899--99999--77898422798817874389731-
Q gi|254781039|r    1 MKNYSTIFVIG-AGAFGTALSSVIASRG---L-A--NVTLLGRKEIL--MQQLE--DTRINAKALPGIKLSPLLNFSSD-   68 (329)
Q Consensus         1 M~~~~kI~ViG-aGa~GtAlA~~La~~g---~-~--~V~l~~r~~~~--~~~i~--~~~~n~~~lp~i~l~~~i~~t~~-   68 (329)
T Consensus         1 m~~p~kV~I~GAaG~ig~~l~~~la~g~l~g~~~~v~l~L~Di~~~~~~l~G~ameL~d~------a~p~l~~v~~~~~~   74 (325)
T PRK05442          1 MKAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPQAQKALKGVVMELEDC------AFPLLAGVVITDDP   74 (325)
T ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCHHHCCCCCCEEEEEECCCCCCCCCCEEEEEHHCC------CCCCCCCEEEECCH
T ss_conf             999729999888868889999998661320899846999965777666556677342116------75444876850887


Q ss_pred             HHHHHHHHHHHCCC--C--------------HHHHHHHHHHHHHHCCCCCCEEECCCCCC
Q ss_conf             68775555441122--1--------------77766655553320356850552375200
Q gi|254781039|r   69 HTLLQNADIVLFAT--S--------------SKGYGEALNFYSNWLKESAEIIICSKGFE  112 (329)
Q Consensus        69 ~~~l~~adiIiiav--p--------------s~~~~~~l~~i~~~l~~~~~ii~~sKGi~  112 (329)
T Consensus        75 ~~a~~~aDvviitag~prkPGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlVv~NPvd  134 (325)
T PRK05442         75 KVAFKDADVALLVGARPRGPGMERKDLLKANGEIFTAQGKALNEVAARDVKVLVVGNPAN  134 (325)
T ss_pred             HHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHH
T ss_conf             898379988998078679999748999976088999999999865798718999578158