HHsearch alignment for GI: 254781039 and conserved domain: PRK05472

Probab=96.55  E-value=0.0099  Score=37.47  Aligned_cols=82  Identities=16%  Similarity=0.317  Sum_probs=55.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHH--HHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC-HHHHHH--HH
Q ss_conf             888779997788789999999--9977998189994498999999977898422798817874389731-687755--55
Q gi|254781039|r    2 KNYSTIFVIGAGAFGTALSSV--IASRGLANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSSD-HTLLQN--AD   76 (329)
Q Consensus         2 ~~~~kI~ViGaGa~GtAlA~~--La~~g~~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~-~~~l~~--ad   76 (329)
T Consensus        82 ~~~~~v~lvGaGnLG~AL~~y~gf~~~gf~Iva~FD~dp~ki------G~~---i~gi~----V~~i~~L~~~i~~~~i~  148 (211)
T PRK05472         82 DKTTNVALVGAGNLGRALLNYNGFKKRGFKIVAAFDVDPEKV------GTK---IGGIP----VYHIDELEEVIKENDIE  148 (211)
T ss_pred             CCCCEEEEECCCHHHHHHHHCCCHHHCCCEEEEEECCCHHHC------CCE---ECCEE----EECHHHHHHHHHHHCCC
T ss_conf             997508998887799999848762318978999974897885------988---38838----73499999999981993


Q ss_pred             HHHCCCCHHHHHHHHHHHHH
Q ss_conf             44112217776665555332
Q gi|254781039|r   77 IVLFATSSKGYGEALNFYSN   96 (329)
Q Consensus        77 iIiiavps~~~~~~l~~i~~   96 (329)
T Consensus       149 iaIiaVP~~~AQ~vad~Lv~  168 (211)
T PRK05472        149 IAILTVPAEAAQEVADRLVE  168 (211)
T ss_pred             EEEEECCHHHHHHHHHHHHH
T ss_conf             89995576889999999998