HHsearch alignment for GI: 254781039 and conserved domain: PRK06444
>PRK06444 prephenate dehydrogenase; Provisional.
Probab=95.91 E-value=0.017 Score=35.88 Aligned_cols=110 Identities=16% Similarity=0.248 Sum_probs=64.5
Q ss_pred EEEEE-CCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCH
Q ss_conf 79997-78878999999999779981899944989999999778984227988178743897316877555544112217
Q gi|254781039|r 6 TIFVI-GAGAFGTALSSVIASRGLANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSSDHTLLQNADIVLFATSS 84 (329)
Q Consensus 6 kI~Vi-GaGa~GtAlA~~La~~g~~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~~~~l~~adiIiiavps 84 (329)
T Consensus 2 ~~~iig~~gr~g~~~~~~~~~~g-~~v~i---------------------------------------~k~D~ifiaVPI 41 (197)
T PRK06444 2 MEIIIGKNGRLGRVLCSILDDNG-LGVYI---------------------------------------KKADHAFLSVPI 41 (197)
T ss_pred CEEEECCCCCHHHHHHHHHCCCC-CEEEE---------------------------------------CCCCEEEEEEEH
T ss_conf 16996378716689999970378-47897---------------------------------------278889998245
Q ss_pred HHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCC-CCHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHCCCCC-CHHHHH
Q ss_conf 7766655553320356850552375200025854-31012332100121001288817899876532124677-317899
Q gi|254781039|r 85 KGYGEALNFYSNWLKESAEIIICSKGFEYNSGML-LSSYSEKVLPSHSISVLSGPGFARDIAQGLPVGVILSS-KNIDIS 162 (329)
Q Consensus 85 ~~~~~~l~~i~~~l~~~~~ii~~sKGi~~~t~~~-~se~i~~~~~~~~~~vlsGPs~A~Eia~~~pt~~~ia~-~d~~~~ 162 (329)
T Consensus 42 ~~~~~iI~~------~~~tiiDv~------SVK~p~k~~~~~IIs~HPM---FGPdS~~~~~~~--~vi~v~d~~~~~~~ 104 (197)
T PRK06444 42 DAALNYIES------YDNNFVEIS------SVKWPFKKYSGKIVSIHPL---FGPMSYNDGVHR--TVIFINDISRDNYL 104 (197)
T ss_pred HHHHHHHHH------CCCEEEEEE------ECCCHHHHHCCCEEEECCC---CCCCCCCCCCCC--EEEEEECCCCHHHH
T ss_conf 888999984------797389988------6331177707987987998---798853124787--69997258877799
Q ss_pred HHHHHHHCCC
Q ss_conf 9999753411
Q gi|254781039|r 163 RRLSKILTTD 172 (329)
Q Consensus 163 ~~i~~~~~~~ 172 (329)
T Consensus 105 ~~~k~lF~g~ 114 (197)
T PRK06444 105 NEINEMFRGY 114 (197)
T ss_pred HHHHHHHCCC
T ss_conf 9999982898