HHsearch alignment for GI: 254781039 and conserved domain: PRK06598

Probab=96.66  E-value=0.016  Score=36.12  Aligned_cols=109  Identities=16%  Similarity=0.203  Sum_probs=64.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCC--EEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEE-ECHHHHHHHHHHH
Q ss_conf             877999778-87899999999977998--1899944989999999778984227988178743897-3168775555441
Q gi|254781039|r    4 YSTIFVIGA-GAFGTALSSVIASRGLA--NVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFS-SDHTLLQNADIVL   79 (329)
Q Consensus         4 ~~kI~ViGa-Ga~GtAlA~~La~~g~~--~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t-~~~~~l~~adiIi   79 (329)
T Consensus         2 m~kVaIvGATG~vG~eli~lL~~~~~p~~~i~~~aS~~s-------~G~~~~~-~~----~~~~~~~~~~~~~~~~Di~f   69 (348)
T PRK06598          2 MYNVGVVGATGMVGSVLLQMLEERDFPVIEPVFFASSRS-------GGKAPSF-GG----KTLLVDALDIEDLKGLDIAL   69 (348)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCC-------CCCCCEE-CC----CEEEEEECCHHHHHCCCEEE
T ss_conf             847999898459999999999867999624999987566-------8987506-89----55478627855760799999


Q ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCEEECCCCC--CCCCCCCCCHHHHHHH
Q ss_conf             12217776665555332035685055237520--0025854310123321
Q gi|254781039|r   80 FATSSKGYGEALNFYSNWLKESAEIIICSKGF--EYNSGMLLSSYSEKVL  127 (329)
Q Consensus        80 iavps~~~~~~l~~i~~~l~~~~~ii~~sKGi--~~~t~~~~se~i~~~~  127 (329)
T Consensus        70 ~a~~~~~s~~~~~~~---~~~g~~VIDlSs~fR~~~~vplvvPEiN~~~i  116 (348)
T PRK06598         70 FSAGGDYSKEVAPKL---RAAGGVVIDNASALRMDPDVPLVVPEVNPDAI  116 (348)
T ss_pred             ECCCCHHHHHHHHHH---HHCCCEEEECCHHHCCCCCCEEECCCCCHHHH
T ss_conf             868823568888999---75898999886431036884376462078999