HHsearch alignment for GI: 254781039 and conserved domain: PRK07340
>PRK07340 ornithine cyclodeaminase; Validated.
Probab=97.14 E-value=0.0023 Score=41.55 Aligned_cols=107 Identities=15% Similarity=0.151 Sum_probs=66.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHH-HCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCC
Q ss_conf 8877999778878999999999-779981899944989999999778984227988178743897316877555544112
Q gi|254781039|r 3 NYSTIFVIGAGAFGTALSSVIA-SRGLANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSSDHTLLQNADIVLFA 81 (329)
Q Consensus 3 ~~~kI~ViGaGa~GtAlA~~La-~~g~~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~~~~l~~adiIiia 81 (329)
T Consensus 124 ~~~~l~iiGaG~QA~~~~~a~~~v~~~~~V~v~~r~~~~a~~~~~~~~~--------~~~~~~~~~~e~av~~aDiI~ta 195 (304)
T PRK07340 124 APRDLLLIGTGVQAAHHLEALAALLPVRRVWVRGRTAASAAAFCAAARA--------LGPTLEPLDGDAIPPAVDVVVTV 195 (304)
T ss_pred CCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHC--------CCCCEEECCHHHHHHHCCEEEEE
T ss_conf 8751799734799999999999859974899987998999999999860--------09917976899998428989994
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHH
Q ss_conf 217776665555332035685055237520002585431012
Q gi|254781039|r 82 TSSKGYGEALNFYSNWLKESAEIIICSKGFEYNSGMLLSSYS 123 (329)
Q Consensus 82 vps~~~~~~l~~i~~~l~~~~~ii~~sKGi~~~t~~~~se~i 123 (329)
T Consensus 196 T~S~~P--v~---~~~~~~g~h-I~aiGs~~p~~~Eld~~l~ 231 (304)
T PRK07340 196 TTSRTP--VY---PEAARAGRL-VVGVGAFTPDMAELAPRTV 231 (304)
T ss_pred CCCCCC--CC---CCCCCCCEE-EECCCCCCCCCEECCHHHH
T ss_conf 189976--44---655799818-9413789998435699999