HHsearch alignment for GI: 254781039 and conserved domain: PRK08655

Probab=99.27  E-value=2.6e-11  Score=93.21  Aligned_cols=154  Identities=16%  Similarity=0.279  Sum_probs=103.6

Q ss_pred             CEEEEE-CCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEE-ECHHHHHHHHHHHCCC
Q ss_conf             779997-78878999999999779981899944989999999778984227988178743897-3168775555441122
Q gi|254781039|r    5 STIFVI-GAGAFGTALSSVIASRGLANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFS-SDHTLLQNADIVLFAT   82 (329)
Q Consensus         5 ~kI~Vi-GaGa~GtAlA~~La~~g~~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t-~~~~~l~~adiIiiav   82 (329)
T Consensus         1 mkI~IIGG~G~MG~~Fa~~f~~sG-yeV~I~gRd~~k~~~va~~-L------G------v~~~~~~~e~~~~advVIvsV   66 (441)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKDKG-YEVIVWGRDPKKGKEVAKE-L------G------VEYASDNIDAAKDGDIVIVSV   66 (441)
T ss_pred             CEEEEEECCCHHHHHHHHHHHHCC-CEEEEEECCCCHHHHHHHH-H------C------CCCCCCHHHHHHCCCEEEEEC
T ss_conf             979999479817799999998679-8899981573135678887-3------8------622244788972499999984


Q ss_pred             CHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHC-CCEE---CCCCCHHHHHHHHHHHHCCC--CC
Q ss_conf             177766655553320356850552375200025854310123321001-2100---12888178998765321246--77
Q gi|254781039|r   83 SSKGYGEALNFYSNWLKESAEIIICSKGFEYNSGMLLSSYSEKVLPSH-SISV---LSGPGFARDIAQGLPVGVIL--SS  156 (329)
Q Consensus        83 ps~~~~~~l~~i~~~l~~~~~ii~~sKGi~~~t~~~~se~i~~~~~~~-~~~v---lsGPs~A~Eia~~~pt~~~i--a~  156 (329)
T Consensus        67 PI~~T~~VI~~laP~l~~~~lL~Dit-----SvK~~p~~aMl~~~~~~~~viglHPMFGP~v~s-l-~gQ-vVVvcP~~~  138 (441)
T PRK08655         67 PINVTEDVIREVAPHVKEGSLLMDVT-----SVKERPVEAMKEFAPEGVEILPTHPMFGPRTPS-L-RGQ-VVILTPTEK  138 (441)
T ss_pred             CHHHHHHHHHHHHCCCCCCCEEEECC-----CCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCC-C-CCC-EEEEECCCC
T ss_conf             88999999999742489996999831-----041779999997565788774548887999866-5-788-899963898


Q ss_pred             CHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf             317899999975341113899738
Q gi|254781039|r  157 KNIDISRRLSKILTTDSFRVYCSD  180 (329)
Q Consensus       157 ~d~~~~~~i~~~~~~~~~~~~~s~  180 (329)
T Consensus       139 ~~~~~~~~l~~~l~~~Ga~v~~~t  162 (441)
T PRK08655        139 RSNPWFPKVRNFLEEEGARVIITT  162 (441)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEECC
T ss_conf             771779999999997798899948