HHsearch alignment for GI: 254781039 and conserved domain: PRK09496
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed.
Probab=98.08 E-value=4.9e-05 Score=52.44 Aligned_cols=84 Identities=20% Similarity=0.326 Sum_probs=56.8
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHH-----HHHHHHHH
Q ss_conf 7799977887899999999977998189994498999999977898422798817874389731687-----75555441
Q gi|254781039|r 5 STIFVIGAGAFGTALSSVIASRGLANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSSDHTL-----LQNADIVL 79 (329)
Q Consensus 5 ~kI~ViGaGa~GtAlA~~La~~g~~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~~~~-----l~~adiIi 79 (329)
T Consensus 1 M~IiI~GaG~vG~~La~~Ls~e~-~dV~vID~d~~~~~~~~~~l-Dv~~-----i~Gd---~~~~~~L~~Agi~~ad~~I 70 (455)
T PRK09496 1 MKIIILGAGQVGGTLAERLVGEN-NDVTVIDTDEERLRRLQDRL-DVRT-----VVGN---GSHPDVLREAGAEDADMLI 70 (455)
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CCEEEEECCHHHHHHHHHHC-CEEE-----EEEC---CCCHHHHHHCCCCCCCEEE
T ss_conf 97999998889999999998689-97999989999999988625-8689-----9966---8999999965998699999
Q ss_pred CCCCHHHHHHHHHHHHHHC
Q ss_conf 1221777666555533203
Q gi|254781039|r 80 FATSSKGYGEALNFYSNWL 98 (329)
Q Consensus 80 iavps~~~~~~l~~i~~~l 98 (329)
T Consensus 71 AvT~~De~Nli~~~lAk~l 89 (455)
T PRK09496 71 AVTDSDETNMVACQIAKSL 89 (455)
T ss_pred EECCCHHHHHHHHHHHHHH
T ss_conf 9579718999999999986