HHsearch alignment for GI: 254781039 and conserved domain: PRK09496

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed.
Probab=98.08  E-value=4.9e-05  Score=52.44  Aligned_cols=84  Identities=20%  Similarity=0.326  Sum_probs=56.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHH-----HHHHHHHH
Q ss_conf             7799977887899999999977998189994498999999977898422798817874389731687-----75555441
Q gi|254781039|r    5 STIFVIGAGAFGTALSSVIASRGLANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSSDHTL-----LQNADIVL   79 (329)
Q Consensus         5 ~kI~ViGaGa~GtAlA~~La~~g~~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~~~~-----l~~adiIi   79 (329)
T Consensus         1 M~IiI~GaG~vG~~La~~Ls~e~-~dV~vID~d~~~~~~~~~~l-Dv~~-----i~Gd---~~~~~~L~~Agi~~ad~~I   70 (455)
T PRK09496          1 MKIIILGAGQVGGTLAERLVGEN-NDVTVIDTDEERLRRLQDRL-DVRT-----VVGN---GSHPDVLREAGAEDADMLI   70 (455)
T ss_pred             CEEEEECCCHHHHHHHHHHHHCC-CCEEEEECCHHHHHHHHHHC-CEEE-----EEEC---CCCHHHHHHCCCCCCCEEE
T ss_conf             97999998889999999998689-97999989999999988625-8689-----9966---8999999965998699999


Q ss_pred             CCCCHHHHHHHHHHHHHHC
Q ss_conf             1221777666555533203
Q gi|254781039|r   80 FATSSKGYGEALNFYSNWL   98 (329)
Q Consensus        80 iavps~~~~~~l~~i~~~l   98 (329)
T Consensus        71 AvT~~De~Nli~~~lAk~l   89 (455)
T PRK09496         71 AVTDSDETNMVACQIAKSL   89 (455)
T ss_pred             EECCCHHHHHHHHHHHHHH
T ss_conf             9579718999999999986