HHsearch alignment for GI: 254781039 and conserved domain: PRK12771

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional.
Probab=96.91  E-value=0.0034  Score=40.50  Aligned_cols=124  Identities=20%  Similarity=0.217  Sum_probs=66.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHH---------------------HHHHHHCCCCCCCCCCCCCCC
Q ss_conf             88779997788789999999997799818999449899---------------------999997789842279881787
Q gi|254781039|r    3 NYSTIFVIGAGAFGTALSSVIASRGLANVTLLGRKEIL---------------------MQQLEDTRINAKALPGIKLSP   61 (329)
Q Consensus         3 ~~~kI~ViGaGa~GtAlA~~La~~g~~~V~l~~r~~~~---------------------~~~i~~~~~n~~~lp~i~l~~   61 (329)
T Consensus       136 tgkkVAVIGaGPAGLsaA~~La~~G-~~VtVfE~~~~~GGml~~GIP~yRLP~~vl~~ei~~i~~~--------GV~~~~  206 (560)
T PRK12771        136 TGKRVAVIGGGPAGLSAAYQLRRLG-HAVTIFEAGPKLGGMMRYGIPGYRLPRDVLDAEIQRILDL--------GVEVKL  206 (560)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHC--------CCEEEE
T ss_conf             8998999897789999999999769-8589967678889888356875447589999999999964--------967983


Q ss_pred             CEEEEEC--HH-HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHH--HHHHHCCCEECC
Q ss_conf             4389731--68-775555441122177766655553320356850552375200025854310123--321001210012
Q gi|254781039|r   62 LLNFSSD--HT-LLQNADIVLFATSSKGYGEALNFYSNWLKESAEIIICSKGFEYNSGMLLSSYSE--KVLPSHSISVLS  136 (329)
Q Consensus        62 ~i~~t~~--~~-~l~~adiIiiavps~~~~~~l~~i~~~l~~~~~ii~~sKGi~~~t~~~~se~i~--~~~~~~~~~vls  136 (329)
T Consensus       207 n~~vg~dit~~~L~~~yDAV~la~Ga~~~r~l--~i~G---~d------~~gV~-~al~fL~~~~~g~~~~~Gk~VvVIG  274 (560)
T PRK12771        207 GVRVGEDITLEQLEGDYDAVFVAIGAQLGKRL--PIPG---ED------AANVL-DAVSFLRAVEEGEPPKLGKRVVVIG  274 (560)
T ss_pred             CCEECCCCCHHHHHCCCCEEEECCCCCCCCCC--CCCC---CC------CCCCE-EHHHHHHHHHCCCCCCCCCEEEEEC
T ss_conf             87844656799971778889991687877608--9788---77------65524-0599999975689755688689989


Q ss_pred             CCCHHHHHHHH
Q ss_conf             88817899876
Q gi|254781039|r  137 GPGFARDIAQG  147 (329)
Q Consensus       137 GPs~A~Eia~~  147 (329)
T Consensus       275 GGntAmD~art  285 (560)
T PRK12771        275 GGNTAMDAART  285 (560)
T ss_pred             CCCHHHHHHHH
T ss_conf             98228999999