HHsearch alignment for GI: 254781039 and conserved domain: PRK13234
>PRK13234 nifH nitrogenase reductase; Reviewed.
Probab=90.92 E-value=0.4 Score=27.02 Aligned_cols=39 Identities=18% Similarity=0.352 Sum_probs=33.0
Q ss_pred CCCCCEEEEECCCHHHHH-----HHHHHHHCCCCEEEEEECCHHH
Q ss_conf 988877999778878999-----9999997799818999449899
Q gi|254781039|r 1 MKNYSTIFVIGAGAFGTA-----LSSVIASRGLANVTLLGRKEIL 40 (329)
Q Consensus 1 M~~~~kI~ViGaGa~GtA-----lA~~La~~g~~~V~l~~r~~~~ 40 (329)
T Consensus 1 m~~mr~IAiYGKGGIGKSTtssNlsAAlA~~G-~rVl~IGCDPK~ 44 (293)
T PRK13234 1 MSALRQIAFYGKGGIGKSTTSQNTLAALVEMG-QKILIVGCDPKA 44 (293)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC-CEEEEECCCCCC
T ss_conf 98775799977984458778999999999779-969997489831