HHsearch alignment for GI: 254781039 and conserved domain: TIGR00745
>TIGR00745 apbA_panE 2-dehydropantoate 2-reductase; InterPro: IPR003710 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway . Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE . ApbA and PanE are allelic .; GO: 0008677 2-dehydropantoate 2-reductase activity, 0006206 pyrimidine base metabolic process.
Probab=99.76 E-value=1.4e-17 Score=134.00 Aligned_cols=285 Identities=18% Similarity=0.238 Sum_probs=218.1
Q ss_pred EEEEECCCHHHHHHHHHHHHCC-CCEEEEEECCH--HHHHHHHHCCCCCCCCCC---CCCCCCEEEEECHHHHH--HHHH
Q ss_conf 7999778878999999999779-98189994498--999999977898422798---81787438973168775--5554
Q gi|254781039|r 6 TIFVIGAGAFGTALSSVIASRG-LANVTLLGRKE--ILMQQLEDTRINAKALPG---IKLSPLLNFSSDHTLLQ--NADI 77 (329)
Q Consensus 6 kI~ViGaGa~GtAlA~~La~~g-~~~V~l~~r~~--~~~~~i~~~~~n~~~lp~---i~l~~~i~~t~~~~~l~--~adi 77 (329)
T Consensus 1 ~i~i~G~GA~G~l~ga~L~~~g~~~~V~~~~R~~r~~~~~~~~~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 80 (332)
T TIGR00745 1 KIAIIGAGAVGSLYGARLARAGANHDVTLLARGKRPKQLEALNQEGLRIVSLDGEGVFELKIPVSAATDPETLPPQKADL 80 (332)
T ss_pred CEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCEEEECCCCCCEEEECCCEEECCCCCCCCCCCCE
T ss_conf 96899517889999999873189951899988721688999985883897625677503304412204753357877548
Q ss_pred HHCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHH--CCC--------EECCCCC-HHHHHHH
Q ss_conf 4112217776665555332035685055237520002585431012332100--121--------0012888-1789987
Q gi|254781039|r 78 VLFATSSKGYGEALNFYSNWLKESAEIIICSKGFEYNSGMLLSSYSEKVLPS--HSI--------SVLSGPG-FARDIAQ 146 (329)
Q Consensus 78 Iiiavps~~~~~~l~~i~~~l~~~~~ii~~sKGi~~~t~~~~se~i~~~~~~--~~~--------~vlsGPs-~A~Eia~ 146 (329)
T Consensus 81 ~~~~~K~~~~~~~~~~~~~~~~~~~~vl~lqNG~g~~------e~l~~~~~~n~~~~l~G~~~~ga~~~~~g~~~~~~g~ 154 (332)
T TIGR00745 81 VIITVKAYQTEEALALLLPLIGPNTVVLLLQNGLGHE------EKLAELLPENRRRVLGGVTTHGAAREEPGLVVHHAGE 154 (332)
T ss_pred EEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCHHH------HHHHHHCCCCCCCEEEEEEEEEEEEECCCEEEEEECC
T ss_conf 9997035004899999986418882799973880279------9999850699770899999887677088408997236
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHCCC---CH--HHHHHHHHHHH
Q ss_conf 65321246773178999999753411138997388614444000256778899752110038---05--78999999899
Q gi|254781039|r 147 GLPVGVILSSKNIDISRRLSKILTTDSFRVYCSDDRIGVQIGGALKNVIAIASGILKGRGCG---DS--ARAIVMVQGLS 221 (329)
Q Consensus 147 ~~pt~~~ia~~d~~~~~~i~~~~~~~~~~~~~s~D~~GvE~~galKNv~AIa~Gi~~gl~~g---~N--~~aal~~~g~~ 221 (329)
T Consensus 155 G~~~~G~~~~~--~~~~~~a~~l~~ag~~~~~~~d~~~~~W~Kl~~N~~iNpltall~~~nG~l~~~~~~~~~~~~~~~~ 232 (332)
T TIGR00745 155 GATKIGDYVGE--EAVEALAELLNEAGIPAELTEDIQAAIWKKLLVNAAINPLTALLDCKNGELLENPPEARELLESLID 232 (332)
T ss_pred CEEEECCCCCH--HHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHCCCHHHHHHHHHHHH
T ss_conf 33884577764--5789999997317985378302899998878645211103121106632101480558999999999
Q ss_pred HHHHHHH-------------HHCCCHHHHHHCCCCCEEEEEEECCCCCH----HHHHHHHHCCC-CCCHHCCCEECHHHH
Q ss_conf 9999998-------------72254455320023210157764477530----06787750890-702572960031999
Q gi|254781039|r 222 EIMKLTE-------------AMNGRADTILRLSGVGDLILTATSEQSRN----FCFGIALGRGE-KQNPDQIQLVEGAIA 283 (329)
Q Consensus 222 Em~~l~~-------------~~g~~~~t~~glaG~GDl~~T~~s~~SRN----~~~G~~lg~g~-~~~~~~~~~vEG~~~ 283 (329)
T Consensus 233 E~~~v~~~~PLF~E~~~~l~a~g~~~~~~~~~~~~---~~~~~-~~~~~~~a~sSM~qD~~~grR~T--------Eid~i 300 (332)
T TIGR00745 233 EVVRVARVYPLFYEARKALEAEGVELPDDEVEEYV---RAVIR-MTAENYEATSSMLQDLERGRRRT--------EIDAI 300 (332)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHH---HHHHH-CCCCCCCCCCHHHHHHHHCCCCC--------CHHHH
T ss_conf 99999874570366420464405767567899999---98750-68222346672799997068743--------07665
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHC
Q ss_conf 999999999828987159999999807
Q gi|254781039|r 284 VSCVINISKKMGLKLPIFQAISDVMMN 310 (329)
Q Consensus 284 ~~~i~~l~~~~~~~~Pi~~~v~~il~~ 310 (329)
T Consensus 301 ~G~v~~~A~~~g~~~P~~~~l~~~~~~ 327 (332)
T TIGR00745 301 NGAVVELAEKLGIATPVNRTLYALLKA 327 (332)
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 359999999749987178999999999