>TIGR01318 gltD_gamma_fam glutamate synthase, small subunit; InterPro: IPR006006 One pathway for the assimilation of ammonia and glutamate biosynthesis involves glutamate synthase (1.4.1.13 from EC) which transfers the amide group of glutamine to 2-oxoglutarate to yield two molecules of glutamate. 2 L-glutamate + NADP^+ = L-glutamine + 2-oxoglutarate + NADPH + H^+. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including Escherichia coli. ; GO: 0016639 oxidoreductase activity acting on the CH-NH2 group of donors NAD or NADP as acceptor, 0006537 glutamate biosynthetic process.

Probab=96.46 E-value=0.0034 Score=40.45 Aligned_cols=138 Identities=20% Similarity=0.309 Sum_probs=85.7 Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHH-------------HHHHHHCCCCCCCCCCCCCCCCEEEEEC- Q ss_conf 88779997788789999999997799818999449899-------------9999977898422798817874389731- Q gi|254781039|r 3 NYSTIFVIGAGAFGTALSSVIASRGLANVTLLGRKEIL-------------MQQLEDTRINAKALPGIKLSPLLNFSSD- 68 (329) Q Consensus 3 ~~~kI~ViGaGa~GtAlA~~La~~g~~~V~l~~r~~~~-------------~~~i~~~~~n~~~lp~i~l~~~i~~t~~- 68 (329) T Consensus 142 ~g~rVAviGAGPAGLaCAD~L~RaGV-~v~VfDRhP~iGGLLtFGIPsFKLdK~V~~~Rr~if~~MGi~F~Ln~EvGrD~ 220 (480) T TIGR01318 142 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFKLNTEVGRDI 220 (480) T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCC-EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCEEECCC T ss_conf 78278997788602579998751785-59997477030760136888511027899999999975892786581650325 Q ss_pred --HHHHHHHHHHHCCCCHH----------HHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHH----HHHCCC Q ss_conf --68775555441122177----------76665555332035685055237520002585431012332----100121 Q gi|254781039|r 69 --HTLLQNADIVLFATSSK----------GYGEALNFYSNWLKESAEIIICSKGFEYNSGMLLSSYSEKV----LPSHSI 132 (329) Q Consensus 69 --~~~l~~adiIiiavps~----------~~~~~l~~i~~~l~~~~~ii~~sKGi~~~t~~~~se~i~~~----~~~~~~ 132 (329) T Consensus 221 ~l~~LLe~YDAVFlGvGTY~~~~ggLP~eDa~GV~~A-LPFLianTr~lm---Gl~-eyGrPiaGw~~~~P~~~~~Gk~V 295 (480) T TIGR01318 221 SLDDLLEDYDAVFLGVGTYRSMRGGLPGEDAPGVLKA-LPFLIANTRQLM---GLP-EYGRPIAGWEPEEPLIDVEGKRV 295 (480) T ss_pred CHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCHHHH-HHHHHHCCCEEC---CCC-CCCCCCCCCCCCCCCCCCCCCEE T ss_conf 5544431148489611433431287788774216664-247766152123---788-87774467776677423477668 Q ss_pred EECCCCCHHHHHHH Q ss_conf 00128881789987 Q gi|254781039|r 133 SVLSGPGFARDIAQ 146 (329) Q Consensus 133 ~vlsGPs~A~Eia~ 146 (329) T Consensus 296 VVLGGGDTaMDCvR 309 (480) T TIGR01318 296 VVLGGGDTAMDCVR 309 (480) T ss_pred EEECCCCCHHHHHH T ss_conf 98588875257889

HHsearch alignment for GI: 254781039 and conserved domain: TIGR01318