HHsearch alignment for GI: 254781039 and conserved domain: TIGR01921
>TIGR01921 DAP-DH diaminopimelate dehydrogenase; InterPro: IPR010190 This entry represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine biosynthesis in Corynebacterium, Bacterioides, Porphyromonas and other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterised ..
Probab=92.20 E-value=0.25 Score=28.38 Aligned_cols=149 Identities=17% Similarity=0.317 Sum_probs=88.0
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCE-EEEEECC-HHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHH
Q ss_conf 988877999778878999999999779981-8999449-89999999778984227988178743897316877555544
Q gi|254781039|r 1 MKNYSTIFVIGAGAFGTALSSVIASRGLAN-VTLLGRK-EILMQQLEDTRINAKALPGIKLSPLLNFSSDHTLLQNADIV 78 (329)
Q Consensus 1 M~~~~kI~ViGaGa~GtAlA~~La~~g~~~-V~l~~r~-~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~~~~l~~adiI 78 (329)
T Consensus 1 M~ki-RaaIVGYGNlG~~V~~ai~~~PDmElvgv~~Rrd~~t~~-va~~------~~------vy~V~~~~K~~~dvdv~ 66 (326)
T TIGR01921 1 MSKI-RAAIVGYGNLGKSVEEAIQQAPDMELVGVFRRRDAETLD-VAEE------LA------VYAVVEDEKELEDVDVL 66 (326)
T ss_pred CCEE-EEEEECCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCC-HHHC------CC------HHHHHHHHHCCCCEEEE
T ss_conf 9705-788862232007999998408980489988707887576-1122------52------02222223202882599
Q ss_pred HCCCCHH---------------------------HHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHC-
Q ss_conf 1122177---------------------------766655553320356850552375200025854310123321001-
Q gi|254781039|r 79 LFATSSK---------------------------GYGEALNFYSNWLKESAEIIICSKGFEYNSGMLLSSYSEKVLPSH- 130 (329)
Q Consensus 79 iiavps~---------------------------~~~~~l~~i~~~l~~~~~ii~~sKGi~~~t~~~~se~i~~~~~~~- 130 (329)
T Consensus 67 iLC~gsatd~pe~~p~fA~~~nTvDsfD~H~~Ip~~r~~~DaaA~~---~g~VSvis~GWDPG~fSi~Rv~geA~lp~g~ 143 (326)
T TIGR01921 67 ILCTGSATDLPEQKPYFAAFINTVDSFDIHTDIPDLRRTLDAAAKE---AGAVSVISAGWDPGLFSINRVLGEAILPKGI 143 (326)
T ss_pred EECCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH---CCCEEEEEECCCCCCHHHHHHHHHHHHCCCC
T ss_conf 9738864555434510012210123650224207899999999986---1987899834788726799999997501686
Q ss_pred CCEECCCCCHHHH------HHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 2100128881789------987653212467731789999997
Q gi|254781039|r 131 SISVLSGPGFARD------IAQGLPVGVILSSKNIDISRRLSK 167 (329)
Q Consensus 131 ~~~vlsGPs~A~E------ia~~~pt~~~ia~~d~~~~~~i~~ 167 (329)
T Consensus 144 tyTfw-GpGlS~GHsdAvrrIdGVk~Av~yTlP~~DA~E~~R~ 185 (326)
T TIGR01921 144 TYTFW-GPGLSQGHSDAVRRIDGVKAAVQYTLPIKDALEKVRR 185 (326)
T ss_pred EEEEE-CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
T ss_conf 13323-7886643589887656678886417885788898626