>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC; InterPro: IPR011967 This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring . The sequences included in this entry are all found in possible operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN . Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. .

Probab=98.30 E-value=9e-07 Score=63.72 Aligned_cols=175 Identities=19% Similarity=0.158 Sum_probs=108.2 Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHH-HHH---HHHHC---CCCCCCCCCCC---CCCCEEEEECHH Q ss_conf 988877999778878999999999779981899944989-999---99977---89842279881---787438973168 Q gi|254781039|r 1 MKNYSTIFVIGAGAFGTALSSVIASRGLANVTLLGRKEI-LMQ---QLEDT---RINAKALPGIK---LSPLLNFSSDHT 70 (329) Q Consensus 1 M~~~~kI~ViGaGa~GtAlA~~La~~g~~~V~l~~r~~~-~~~---~i~~~---~~n~~~lp~i~---l~~~i~~t~~~~ 70 (329) T Consensus 2 l~~~v~vaVIGaGaMGaGIA~VAA~aG-H~V~LYD~r~eA~a~a~agIe~~L~~lV~kgkL~a~e~e~~l~Rl~PV~~l~ 80 (508) T TIGR02279 2 LINVVKVAVIGAGAMGAGIAQVAARAG-HQVLLYDIRAEALARAVAGIEKRLKSLVEKGKLTAEEAERTLKRLVPVTDLE 80 (508) T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHCC-CEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH T ss_conf 654106899646852103899998259-8488722888999999999999988875237777888888873178778999 Q ss_pred HHHHHHHHHCCCCH--HHHHHHHHHHHHHCCCCCCEEECCCCCCCC----CCCCCCHHHHHHH--HHC---CCEECCCCC Q ss_conf 77555544112217--776665555332035685055237520002----5854310123321--001---210012888 Q gi|254781039|r 71 LLQNADIVLFATSS--KGYGEALNFYSNWLKESAEIIICSKGFEYN----SGMLLSSYSEKVL--PSH---SISVLSGPG 139 (329) Q Consensus 71 ~l~~adiIiiavps--~~~~~~l~~i~~~l~~~~~ii~~sKGi~~~----t~~~~se~i~~~~--~~~---~~~vlsGPs 139 (329) T Consensus 81 alAdAgLvIEAivE~L~VK~aLFaqLe~lc~ad~iiasNTSSlSIta~AAglarP~rvaGlHFFNPAP~MaLVEVVSGLa 160 (508) T TIGR02279 81 ALADAGLVIEAIVENLEVKKALFAQLEELCTADAIIASNTSSLSITALAAGLARPERVAGLHFFNPAPVMALVEVVSGLA 160 (508) T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCC T ss_conf 98602732246774067779999989863670152562325777999997313877075111348655362156623635 Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCC Q ss_conf 1789987653212467731789999997534111389973886 Q gi|254781039|r 140 FARDIAQGLPVGVILSSKNIDISRRLSKILTTDSFRVYCSDDR 182 (329) Q Consensus 140 ~A~Eia~~~pt~~~ia~~d~~~~~~i~~~~~~~~~~~~~s~D~ 182 (329) T Consensus 161 T~~eVae~ly~~a~aWGK~PV------h~~STPGFIVNRVARP 197 (508) T TIGR02279 161 TEAEVAEQLYETARAWGKQPV------HARSTPGFIVNRVARP 197 (508) T ss_pred CHHHHHHHHHHHHHHCCCCCC------CCCCCCCCEECCCCCC T ss_conf 428999999999873288563------2346988234265673

HHsearch alignment for GI: 254781039 and conserved domain: TIGR02279