HHsearch alignment for GI: 254781039 and conserved domain: cd00300
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=97.71 E-value=0.00011 Score=50.14 Aligned_cols=102 Identities=21% Similarity=0.256 Sum_probs=64.7
Q ss_pred EEEECCCHHHHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCC--C
Q ss_conf 9997788789999999997799-818999449899999997789842279881787438973168775555441122--1
Q gi|254781039|r 7 IFVIGAGAFGTALSSVIASRGL-ANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSSDHTLLQNADIVLFAT--S 83 (329)
Q Consensus 7 I~ViGaGa~GtAlA~~La~~g~-~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~~~~l~~adiIiiav--p 83 (329)
T Consensus 1 V~IIGaG~VG~~~A~~l~~~~l~~el~L~Di~~~~a~g~a~Dl~~~~~~---~~~~~~~~~~~~~~~~daDvvVitaG~~ 77 (300)
T cd00300 1 ITIIGAGNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAF---LATGTIVRGGDYADAADADIVVITAGAP 77 (300)
T ss_pred CEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCC---CCCCEEECCCCHHHHCCCCEEEECCCCC
T ss_conf 9898968899999999986799887999818998115688887725634---6885398279889967999999878989
Q ss_pred H--------------HHHHHHHHHHHHHCCCCCCEEECCCCCC
Q ss_conf 7--------------7766655553320356850552375200
Q gi|254781039|r 84 S--------------KGYGEALNFYSNWLKESAEIIICSKGFE 112 (329)
Q Consensus 84 s--------------~~~~~~l~~i~~~l~~~~~ii~~sKGi~ 112 (329)
T Consensus 78 rkpg~tR~dll~~Na~I~k~i~~~i~~~-~p~~ivivvtNPvD 119 (300)
T cd00300 78 RKPGETRLDLINRNAPILRSVITNLKKY-GPDAIILVVSNPVD 119 (300)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEECCCCHH
T ss_conf 9979988999998889999999999841-99718998579669