HHsearch alignment for GI: 254781039 and conserved domain: cd01338

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.13  E-value=0.0014  Score=42.93  Aligned_cols=103  Identities=19%  Similarity=0.246  Sum_probs=62.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHC---CC-C--EEEEEECCHHH--HHH--HHHCCCCCCCCCCCCCCCCEEEEEC-HHH
Q ss_conf             877999778-87899999999977---99-8--18999449899--999--9977898422798817874389731-687
Q gi|254781039|r    4 YSTIFVIGA-GAFGTALSSVIASR---GL-A--NVTLLGRKEIL--MQQ--LEDTRINAKALPGIKLSPLLNFSSD-HTL   71 (329)
Q Consensus         4 ~~kI~ViGa-Ga~GtAlA~~La~~---g~-~--~V~l~~r~~~~--~~~--i~~~~~n~~~lp~i~l~~~i~~t~~-~~~   71 (329)
T Consensus         2 p~KV~IiGAaG~IG~~la~~la~g~l~g~~~~v~l~L~Di~~~~~~l~G~amDl~~~------a~~~~~~v~~~~~~~~a   75 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDC------AFPLLAEIVITDDPNVA   75 (322)
T ss_pred             CEEEEEECCCCHHHHHHHHHHHHCHHCCCCCEEEEEEECCCCCCCCCCEEEEEHHHC------CCCCCCCEEEECCHHHH
T ss_conf             709999899968999999999711130799726999975757566676577445326------76545877974887898


Q ss_pred             HHHHHHHHCCC--C--------------HHHHHHHHHHHHHHCCCCCCEEECCCCCC
Q ss_conf             75555441122--1--------------77766655553320356850552375200
Q gi|254781039|r   72 LQNADIVLFAT--S--------------SKGYGEALNFYSNWLKESAEIIICSKGFE  112 (329)
Q Consensus        72 l~~adiIiiav--p--------------s~~~~~~l~~i~~~l~~~~~ii~~sKGi~  112 (329)
T Consensus        76 ~~~aDvVvitaG~prkPG~tR~DLl~~Na~I~~~~~~~i~~~a~p~~~vivvsNPvd  132 (322)
T cd01338          76 FKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCN  132 (322)
T ss_pred             HCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHH
T ss_conf             378878999368789989818999998689999999999975798838999578188