HHsearch alignment for GI: 254781039 and conserved domain: cd01339
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=97.92 E-value=3.8e-05 Score=53.13 Aligned_cols=100 Identities=22% Similarity=0.302 Sum_probs=64.0
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH--HHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCC--
Q ss_conf 99977887899999999977998189994498999999--97789842279881787438973168775555441122--
Q gi|254781039|r 7 IFVIGAGAFGTALSSVIASRGLANVTLLGRKEILMQQL--EDTRINAKALPGIKLSPLLNFSSDHTLLQNADIVLFAT-- 82 (329)
Q Consensus 7 I~ViGaGa~GtAlA~~La~~g~~~V~l~~r~~~~~~~i--~~~~~n~~~lp~i~l~~~i~~t~~~~~l~~adiIiiav-- 82 (329)
T Consensus 1 V~IIGaG~VG~~~a~~l~~~~~~el~L~D~~~~~a~g~a~DL~~~~~--~--~~~~~~v~~~~d~~~~~daDvvVitaG~ 76 (300)
T cd01339 1 ISIIGAGNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAP--I--LGSDTKVTGTNDYEDIAGSDVVVITAGI 76 (300)
T ss_pred CEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH--C--CCCCCEEEECCCHHHHCCCCEEEEECCC
T ss_conf 98989688899999999857996799980999800579887761320--1--5898589947887994799899990677
Q ss_pred CH--------------HHHHHHHHHHHHHCCCCCCEEECCCCC
Q ss_conf 17--------------776665555332035685055237520
Q gi|254781039|r 83 SS--------------KGYGEALNFYSNWLKESAEIIICSKGF 111 (329)
Q Consensus 83 ps--------------~~~~~~l~~i~~~l~~~~~ii~~sKGi 111 (329)
T Consensus 77 ~~k~g~tR~dLl~~N~~I~~~i~~~i~~~~-p~~i~lvvsNPv 118 (300)
T cd01339 77 PRKPGMSRDDLLGTNAKIVKEVAENIKKYA-PNAIVIVVTNPL 118 (300)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCEEEECCCCH
T ss_conf 899899889999988999999999999659-984899827938