HHsearch alignment for GI: 254781039 and conserved domain: pfam00056
>pfam00056 Ldh_1_N lactate/malate dehydrogenase, NAD binding domain. L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate. The enzyme participates in the citric acid cycle. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. N-terminus (this family) is a Rossmann NAD-binding fold. C-terminus is an unusual alpha+beta fold.
Probab=98.01 E-value=1.8e-05 Score=55.22 Aligned_cols=103 Identities=17% Similarity=0.225 Sum_probs=62.7
Q ss_pred CEEEEECCC-HHHHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCC
Q ss_conf 779997788-789999999997799-818999449899999997789842279881787438973168775555441122
Q gi|254781039|r 5 STIFVIGAG-AFGTALSSVIASRGL-ANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSSDHTLLQNADIVLFAT 82 (329)
Q Consensus 5 ~kI~ViGaG-a~GtAlA~~La~~g~-~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~~~~l~~adiIiiav 82 (329)
T Consensus 1 mKV~IIGagg~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~--~~-~~~~~~~~~~~~~~~~daDiVVita 77 (142)
T pfam00056 1 VKVAVVGAGGGVGSSLAFALALQGLADELVLVDINKDKAEGVAMDLSHGS--TF-LSVPGIVGGDDYEALKDADVVVITA 77 (142)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCC--CC-CCCCEEECCCCHHHHCCCCEEEEEC
T ss_conf 98999898778999999999747966347885057764117999986144--34-7887697488388837899999815
Q ss_pred CH----------------HHHHHHHHHHHHHCCCCCCEEECCCCC
Q ss_conf 17----------------776665555332035685055237520
Q gi|254781039|r 83 SS----------------KGYGEALNFYSNWLKESAEIIICSKGF 111 (329)
Q Consensus 83 ps----------------~~~~~~l~~i~~~l~~~~~ii~~sKGi 111 (329)
T Consensus 78 G~~~k~g~~R~dll~~Na~I~~~i~~~i~~~~-p~~ivivvtNPv 121 (142)
T pfam00056 78 GVPRKPGMTRLDLLNRNAGIFKDIVPAIAKSA-PDAIVLVVSNPV 121 (142)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEEEECCCH
T ss_conf 77789998778999974699999999999769-981999945946