HHsearch alignment for GI: 254781039 and conserved domain: pfam00899

>pfam00899 ThiF ThiF family. This family contains a repeated domain in ubiquitin activating enzyme E1 and members of the bacterial ThiF/MoeB/HesA family.
Probab=97.17  E-value=0.00042  Score=46.41  Aligned_cols=105  Identities=24%  Similarity=0.393  Sum_probs=61.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCC-CCCCC--CC--------CCCCCCEEEE-------
Q ss_conf             779997788789999999997799818999449899999997789-84227--98--------8178743897-------
Q gi|254781039|r    5 STIFVIGAGAFGTALSSVIASRGLANVTLLGRKEILMQQLEDTRI-NAKAL--PG--------IKLSPLLNFS-------   66 (329)
Q Consensus         5 ~kI~ViGaGa~GtAlA~~La~~g~~~V~l~~r~~~~~~~i~~~~~-n~~~l--p~--------i~l~~~i~~t-------   66 (329)
T Consensus         2 skVlivG~GglG~~~~~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~i~   81 (134)
T pfam00899         2 SRVLVVGAGGLGSPAAEYLARAGVGKLTLVDFDTVELSNLNRQILFTESDIGKPKAEVAKERLRAINPDVEVEAYPERLT   81 (134)
T ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCHHHCCCEEHHHHHHHHHHHCCCCEEEEEECCCC
T ss_conf             88999898889999999999938974999989567632227224233646688107999999997789958999925679


Q ss_pred             -EC-HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEECCC-CC
Q ss_conf             -31-68775555441122177766655553320356850552375-20
Q gi|254781039|r   67 -SD-HTLLQNADIVLFATSSKGYGEALNFYSNWLKESAEIIICSK-GF  111 (329)
Q Consensus        67 -~~-~~~l~~adiIiiavps~~~~~~l~~i~~~l~~~~~ii~~sK-Gi  111 (329)
T Consensus        82 ~~~~~~~~~~~DvVi~~~Dn~~~r~~ln~~c~--~~~ip~i~~~~~g~  127 (134)
T pfam00899        82 PENLEELLKGADLVVDALDNFAARYLLNDACV--KRGIPLISAGALGF  127 (134)
T ss_pred             HHHHHHCCCCCCEEEECCCCHHHHHHHHHHHH--HCCCCEEEEECCCC
T ss_conf             77876426448899999899999999999999--85998999554678