HHsearch alignment for GI: 254781039 and conserved domain: pfam00899
>pfam00899 ThiF ThiF family. This family contains a repeated domain in ubiquitin activating enzyme E1 and members of the bacterial ThiF/MoeB/HesA family.
Probab=97.17 E-value=0.00042 Score=46.41 Aligned_cols=105 Identities=24% Similarity=0.393 Sum_probs=61.1
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCC-CCCCC--CC--------CCCCCCEEEE-------
Q ss_conf 779997788789999999997799818999449899999997789-84227--98--------8178743897-------
Q gi|254781039|r 5 STIFVIGAGAFGTALSSVIASRGLANVTLLGRKEILMQQLEDTRI-NAKAL--PG--------IKLSPLLNFS------- 66 (329)
Q Consensus 5 ~kI~ViGaGa~GtAlA~~La~~g~~~V~l~~r~~~~~~~i~~~~~-n~~~l--p~--------i~l~~~i~~t------- 66 (329)
T Consensus 2 skVlivG~GglG~~~~~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~i~ 81 (134)
T pfam00899 2 SRVLVVGAGGLGSPAAEYLARAGVGKLTLVDFDTVELSNLNRQILFTESDIGKPKAEVAKERLRAINPDVEVEAYPERLT 81 (134)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCHHHCCCEEHHHHHHHHHHHCCCCEEEEEECCCC
T ss_conf 88999898889999999999938974999989567632227224233646688107999999997789958999925679
Q ss_pred -EC-HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEECCC-CC
Q ss_conf -31-68775555441122177766655553320356850552375-20
Q gi|254781039|r 67 -SD-HTLLQNADIVLFATSSKGYGEALNFYSNWLKESAEIIICSK-GF 111 (329)
Q Consensus 67 -~~-~~~l~~adiIiiavps~~~~~~l~~i~~~l~~~~~ii~~sK-Gi 111 (329)
T Consensus 82 ~~~~~~~~~~~DvVi~~~Dn~~~r~~ln~~c~--~~~ip~i~~~~~g~ 127 (134)
T pfam00899 82 PENLEELLKGADLVVDALDNFAARYLLNDACV--KRGIPLISAGALGF 127 (134)
T ss_pred HHHHHHCCCCCCEEEECCCCHHHHHHHHHHHH--HCCCCEEEEECCCC
T ss_conf 77876426448899999899999999999999--85998999554678