HHsearch alignment for GI: 254781039 and conserved domain: pfam02423
>pfam02423 OCD_Mu_crystall Ornithine cyclodeaminase/mu-crystallin family. This family contains the bacterial Ornithine cyclodeaminase enzyme EC:4.3.1.12, which catalyses the deamination of ornithine to proline. This family also contains mu-Crystallin the major component of the eye lens in several Australian marsupials, mRNA for this protein has also been found in human retina.
Probab=96.87 E-value=0.0044 Score=39.75 Aligned_cols=93 Identities=20% Similarity=0.347 Sum_probs=61.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHH-CCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC-HHHHHHHHHHHC
Q ss_conf 88779997788789999999997-7998189994498999999977898422798817874389731-687755554411
Q gi|254781039|r 3 NYSTIFVIGAGAFGTALSSVIAS-RGLANVTLLGRKEILMQQLEDTRINAKALPGIKLSPLLNFSSD-HTLLQNADIVLF 80 (329)
Q Consensus 3 ~~~kI~ViGaGa~GtAlA~~La~-~g~~~V~l~~r~~~~~~~i~~~~~n~~~lp~i~l~~~i~~t~~-~~~l~~adiIii 80 (329)
T Consensus 128 da~~l~iiGaG~QA~~~l~al~~v~~i~~v~v~~r~~~~~~~f~~~~~~----~~~----~v~~~~~~~~av~~ADIIvt 199 (312)
T pfam02423 128 DASTLAIIGAGAQAEFQAEALSAVLPIEEIRIYDRDPEAAEKFARNLQG----KGF----EIVACTSAEEAVEGADIVVT 199 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH----CCC----CEEEECCHHHHHHCCCEEEE
T ss_conf 9757999646253899999999619976899996898999999999983----499----65994899999714998999
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf 22177766655553320356850552
Q gi|254781039|r 81 ATSSKGYGEALNFYSNWLKESAEIII 106 (329)
Q Consensus 81 avps~~~~~~l~~i~~~l~~~~~ii~ 106 (329)
T Consensus 200 aT~s~~~-P~~~--~~~l~~G~hv~~ 222 (312)
T pfam02423 200 VTPDKEF-PILK--AEWVKPGVHINA 222 (312)
T ss_pred EECCCCC-CCCC--HHHCCCCCEEEE
T ss_conf 7359977-5007--788389868997