HHsearch alignment for GI: 254781039 and conserved domain: pfam10100
>pfam10100 DUF2338 Uncharacterized protein conserved in bacteria (DUF2338). Members of this family of hypothetical bacterial proteins have no known function.
Probab=96.75 E-value=0.0028 Score=41.07 Aligned_cols=296 Identities=17% Similarity=0.233 Sum_probs=158.9
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHH----HHHCCCCCCCCCCC------CCCCCEE---EEEC-H
Q ss_conf 8779997788789999999997799818999449899999----99778984227988------1787438---9731-6
Q gi|254781039|r 4 YSTIFVIGAGAFGTALSSVIASRGLANVTLLGRKEILMQQ----LEDTRINAKALPGI------KLSPLLN---FSSD-H 69 (329)
Q Consensus 4 ~~kI~ViGaGa~GtAlA~~La~~g~~~V~l~~r~~~~~~~----i~~~~~n~~~lp~i------~l~~~i~---~t~~-~ 69 (329)
T Consensus 1 ~~~vLi~GtGPvaIQLAv~~~~~~~~~vgi~~R~S~rs~~f~e~l~~~~--~~~~~~vqn~~h~~~~G~~~id~~~~~~~ 78 (429)
T pfam10100 1 MSKVLILGTGPVAIQLAVDLKLHGDARLGIAGRPSTRSKRLFEALARTD--TLFLVGTQNEQHQQLEGKCTIDCFIKDYA 78 (429)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEHHHHHHHHHCCCEEHHHHHCCHH
T ss_conf 9736996377799999999985237455453275355799999997377--67986102245676447156245413798
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHH-CCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCC---EECCC--------
Q ss_conf 8775555441122177766655553320-35685055237520002585431012332100121---00128--------
Q gi|254781039|r 70 TLLQNADIVLFATSSKGYGEALNFYSNW-LKESAEIIICSKGFEYNSGMLLSSYSEKVLPSHSI---SVLSG-------- 137 (329)
Q Consensus 70 ~~l~~adiIiiavps~~~~~~l~~i~~~-l~~~~~ii~~sKGi~~~t~~~~se~i~~~~~~~~~---~vlsG-------- 137 (329)
T Consensus 79 ~i~g~WdtlILavtaDaY~~VL~qi~~~~L~~vk~iILvSPt~--GS~~lv~~~l~~~~~~~eVISfStY~gdTr~~d~~ 156 (429)
T pfam10100 79 TIVGDWDTLILAVTADAYYDVLQQIPWETLKRVKCVILISPTF--GSNLLVQNFLNALNKDAEVISFSTYYGDTRWIDDE 156 (429)
T ss_pred HHCCCCCEEEEEEEHHHHHHHHHCCCHHHHHCCCEEEEECCCC--CHHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCC
T ss_conf 8515133799995218789999707998870477799976664--40799999998559981699853003643100678
Q ss_pred -CCHHHHHHHHHHHHCCCCCCHH--HHHHHHHHHHCCCCEEEEECCCCCEEEEEEH--------HHHHHHHHHHHHHHH-
Q ss_conf -8817899876532124677317--8999999753411138997388614444000--------256778899752110-
Q gi|254781039|r 138 -PGFARDIAQGLPVGVILSSKNI--DISRRLSKILTTDSFRVYCSDDRIGVQIGGA--------LKNVIAIASGILKGR- 205 (329)
Q Consensus 138 -Ps~A~Eia~~~pt~~~ia~~d~--~~~~~i~~~~~~~~~~~~~s~D~~GvE~~ga--------lKNv~AIa~Gi~~gl- 205 (329)
T Consensus 157 ~~~~vl--TtavKkkiYlgSt~~~S~~~~~l~~~~~~~~I~~~~~~~pL~AE~rNislYVHpplfmndfsL~aI-F~~~~ 233 (429)
T pfam10100 157 QPNRVL--TTAVKKKLYLGSTHSGSAELSRLCAVFAQLGIELTPMESPLAAETRNISLYVHPPLFMNDFSLQAI-FEETK 233 (429)
T ss_pred CCCHHH--HHHHHCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHCCCEEEECCHHHHHHHHHHHH-HCCCC
T ss_conf 873578--876422078547999967899999999875930698178777754263034267676425479998-58888
Q ss_pred ------C---CCCHHHHHH--HHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEECCCCCHHHHHH------------
Q ss_conf ------0---380578999--99989999999987225445532002321015776447753006787------------
Q gi|254781039|r 206 ------G---CGDSARAIV--MVQGLSEIMKLTEAMNGRADTILRLSGVGDLILTATSEQSRNFCFGI------------ 262 (329)
Q Consensus 206 ------~---~g~N~~aal--~~~g~~Em~~l~~~~g~~~~t~~glaG~GDl~~T~~s~~SRN~~~G~------------ 262 (329)
T Consensus 234 ~~kYvYKlyPEGPIT~~lI~~M~~lw~E~m~ll~~l~v~~iNLLkFm-~dDnYPV~~eslsr~dIe~F~~l~~i~QeYLL 312 (429)
T pfam10100 234 VPKYVYKLYPEGPITPTLIREMRLLWKEMMRILNRLGVEPINLLRFM-VDDNYPVRPEMLSRRDIENFNNLPAIHQEYLL 312 (429)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH-CCCCCCCCHHHCCHHHHHHHHCCCHHHHHHHH
T ss_conf 86137842789997899999999999999999997499850178775-15888678354588888656427857766888
Q ss_pred ------HHHC--------CCCCC-----------HHC------CCEECHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf ------7508--------90702-----------572------960031999999999999828987159999999
Q gi|254781039|r 263 ------ALGR--------GEKQN-----------PDQ------IQLVEGAIAVSCVINISKKMGLKLPIFQAISDV 307 (329)
Q Consensus 263 ------~lg~--------g~~~~-----------~~~------~~~vEG~~~~~~i~~l~~~~~~~~Pi~~~v~~i 307 (329)
T Consensus 313 yVRYtslLIDPfS~PDe~GrYFDFSAVp~~~v~~d~~g~w~IPRmP~EDY~rl~iIq~ia~~l~v~~Ptid~~l~~ 388 (429)
T pfam10100 313 YVRYTALLIDPFSTPDEQGRYFDFSAVPFKRVYIDENGLWHIPRMPLEDYYRLAIIQAIAKALDVAMPTIDQLLQR 388 (429)
T ss_pred HHHHHHHEECCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf 8875654017888878788640000351023357666756678886788899999999999838998169999999