HHsearch alignment for GI: 254781040 and conserved domain: COG2947

Probab=100.00  E-value=0  Score=403.90  Aligned_cols=140  Identities=53%  Similarity=0.899  Sum_probs=134.1

Q ss_pred             CCCCEECCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCC-CCCCEEEEEECCCCCCCCCCCC-
Q ss_conf             97450011588667789985868887777765899999998538897899994588-8763488886044666776445-
Q gi|254781040|r    1 MAYWLVKSEPSEWSWKMQQDKGRVGEAWTGVRNYQARNNMRKMRVGDKGFFYHSNK-GREIVGIFEVITCTYPDPTAEQ-   78 (143)
Q Consensus         1 M~yWL~KsEP~~~s~~~~~~~~~~~~~WdGVRNyqArn~lr~Mk~GD~~~fYHS~~-~~~ivgi~~v~~~~y~d~t~~~-   78 (143)
T Consensus         2 ~~yWLmKSEP~~~s~~~l~~~g~--~~W~GVRNYqARNfmR~M~iGD~~fFYHSNc~~pgIvGl~~V~~~a~pD~tq~d~   79 (156)
T COG2947           2 AAYWLMKSEPDVFSIEMLKAVGE--EPWDGVRNYQARNFMRDMKIGDLGFFYHSNCKPPGIVGLAEVCALAHPDPTQFDP   79 (156)
T ss_pred             CCEEEEECCCCCCCHHHHHHHCC--CCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEHHHHHHCCCCCCCCCCC
T ss_conf             74333406841035999997275--7661067788888887526675589971589998742202211015899424587


Q ss_pred             ------------CCCEEEEECHHHCCCCCCCCHHHHHCCCCCCCCCCC-CCCCCCEEECCHHHHHHHHHHCCCCCCC
Q ss_conf             ------------672279850322107997588898408201146010-0574550116899999999972799989
Q gi|254781040|r   79 ------------SSCWECVDICAVCSMPCPVSLMAIKANPRLSSMILI-VSSRLSVQPVTTDEYLEVCRMGKLSNPP  142 (143)
Q Consensus        79 ------------~p~W~~VdVk~~~~l~~pVsL~~lK~~~~L~~m~Ll-k~~RLSV~PVt~~ew~~I~~L~~~~~p~  142 (143)
T Consensus        80 ~spYyDPka~~e~pRW~~Vdv~~v~~~~~~vtL~~lK~~~~~~~~~~l~~g~RLSV~PVt~~ew~~i~~l~~~~~p~  156 (156)
T COG2947          80 ASPYYDPKATPEDPRWYCVDVRFVRKLPRPVTLKELKANPELAEMSLLVKGNRLSVQPVTPEEWKEILRLGGLDAPP  156 (156)
T ss_pred             CCCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCHHHHHCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCCC
T ss_conf             77666855666799726876477761688766899862900554246540672456647999999999961899998