HHsearch alignment of GI: 254781040 and MMDB domain: 2ar1_A_
>2ar1_A (A:) Hypothetical protein; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.60A {Leishmania major}
Probab=100.00 E-value=0 Score=384.14 Aligned_cols=140 Identities=41% Similarity=0.664 Sum_probs=133.3
Q ss_pred CCCCEECCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCC-CCCCEEEEEECCCCCCCCCCC--
Q ss_conf 97450011588667789985868887777765899999998538897899994588-876348888604466677644--
Q gi|254781040|r 1 MAYWLVKSEPSEWSWKMQQDKGRVGEAWTGVRNYQARNNMRKMRVGDKGFFYHSNK-GREIVGIFEVITCTYPDPTAE-- 77 (143)
Q Consensus 1 M~yWL~KsEP~~~s~~~~~~~~~~~~~WdGVRNyqArn~lr~Mk~GD~~~fYHS~~-~~~ivgi~~v~~~~y~d~t~~-- 77 (143)
|+||||||||+.|||+|+..++. +.||||||||||||||+|++||+|||||||| .++|||+++|++++|||+|++
T Consensus 19 ~~YWL~KsEP~~~si~dl~~~~~--~~WdGvrNyqarn~lr~mk~GD~vlfYhS~~~~~~IvGia~V~~~~~pD~t~~d~ 96 (172)
T 2ar1_A 19 IHYWLLKSEPHKFSIDDLAKQKT--SPWDGVRNYAARNNMRAMSVGDKVLFYHSNTKEPGVAGLAEVVRLAYDDFTALDK 96 (172)
T ss_dssp CCEEEEEECTTTSCHHHHHHHSE--EECCCCCCHHHHHHHHHCCTTCEEEEEECSSSSCEEEEEEEEEEEEEECGGGGCT
T ss_pred CCEEEEECCCCCCCHHHHHCCCC--CCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCC
T ss_conf 54567613888689999814588--7777803299999998576888899997378887147999983024566765577
Q ss_pred -----------CCCCEEEEECHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCC
Q ss_conf -----------56722798503221079975888984082011460100574550116899999999972799989
Q gi|254781040|r 78 -----------QSSCWECVDICAVCSMPCPVSLMAIKANPRLSSMILIVSSRLSVQPVTTDEYLEVCRMGKLSNPP 142 (143)
Q Consensus 78 -----------~~p~W~~VdVk~~~~l~~pVsL~~lK~~~~L~~m~Llk~~RLSV~PVt~~ew~~I~~L~~~~~p~ 142 (143)
++|+|++|||+|+++|++||+|++||+++.|++|.|+||+||||+|||++||++|++|++..+|+
T Consensus 97 ~~~y~Dpks~~~~p~w~~V~v~~~~~l~~pV~L~~LK~~~~l~~m~llr~~RLSv~pVt~~e~~~I~~L~~~~~p~ 172 (172)
T 2ar1_A 97 TSEYFDPKATKEKNPWKMVDVKFVARWDTVLTLHELKSRRELQKMALFTQRRLSVQPVSASEYAYILRMNEEQQRK 172 (172)
T ss_dssp TSTTCCTTCCSSCCCCEEEEEEEEEEEEEEEEHHHHTTCGGGTTCHHHHCSSCSEEEECHHHHHHHHHHHHHHTC-
T ss_pred CCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHCCCCCCCCCEEECCCCCEEECCHHHHHHHHHHHCCCCCC
T ss_conf 7651475455678876899998700148862799986596712294420486775655999999999976645579