HHsearch alignment of GI: 254781040 and MMDB domain: 2p5d_A_
>2p5d_A (A:) UPF0310 protein mjecl36; NPPSFA, national project on protein structural and functional analyses; 1.70A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=4.4e-35 Score=230.03 Aligned_cols=121 Identities=20% Similarity=0.372 Sum_probs=104.5
Q ss_pred CCCCEECCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCC------CCCCEEEEEECCCCCCCC
Q ss_conf 97450011588667789985868887777765899999998538897899994588------876348888604466677
Q gi|254781040|r 1 MAYWLVKSEPSEWSWKMQQDKGRVGEAWTGVRNYQARNNMRKMRVGDKGFFYHSNK------GREIVGIFEVITCTYPDP 74 (143)
Q Consensus 1 M~yWL~KsEP~~~s~~~~~~~~~~~~~WdGVRNyqArn~lr~Mk~GD~~~fYHS~~------~~~ivgi~~v~~~~y~d~ 74 (143)
|+|||+|+||+.|++.. +. ..++.|||||||||| ||+||++|||||+. .++|||+++|++++|+|+
T Consensus 4 ~~YWL~k~ep~~~~~~~-~~--~~~~~~~gvrn~~ar-----mk~GD~~~fY~s~~~~~~~~~~~ivgi~~V~~~~~~D~ 75 (147)
T 2p5d_A 4 MAYWLCITNEDNWKVIK-EK--KIWGVAERYKNTINK-----VKVGDKLIIYEIQRSGKDYKPPYIRGVYEVVSEVYKDS 75 (147)
T ss_dssp CCEEEEEECHHHHHHHH-HH--CEEEECGGGHHHHTT-----CCTTCEEEEEECCBCSTTCBCCEEEEEEEECSCCEECC
T ss_pred HHHEEECCCHHHHHHHH-HC--CEEECCCCCHHHHHH-----CCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCEEECC
T ss_conf 43120107899999999-78--988625766407865-----78987799996465688766526999999956516326
Q ss_pred CCC--------CCCCEEEEECHHHCCCCCCCCHHHHHCCCCCCCCCCCC-CCCCCE-------EECCHHHHHHHHH
Q ss_conf 644--------56722798503221079975888984082011460100-574550-------1168999999999
Q gi|254781040|r 75 TAE--------QSSCWECVDICAVCSMPCPVSLMAIKANPRLSSMILIV-SSRLSV-------QPVTTDEYLEVCR 134 (143)
Q Consensus 75 t~~--------~~p~W~~VdVk~~~~l~~pVsL~~lK~~~~L~~m~Llk-~~RLSV-------~PVt~~ew~~I~~ 134 (143)
|+. ++++|++|+|+++.+|++||+|.+|+ ++|.+++ ++|||+ +|||+++|++|+.
T Consensus 76 t~~~~d~~~~~~~~~~~~v~v~~~~~~~~pv~l~~l~-----~~l~~i~~~~rls~~~r~~~~~pV~~~d~~~I~~ 146 (147)
T 2p5d_A 76 SKIFKPTPRNPNEKFPYRVKLKEIKVFEPPINFKELI-----PKLKFITNKKRWSGHLMGKAMREIPEEDYKLIVG 146 (147)
T ss_dssp CCCSCCBTTBTTCCCCEEEEEEEEEEEEEEEEHHHHG-----GGCTTCCCSSSCCC--CCCSEEEECHHHHHHHHT
T ss_pred CCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCHHHHH-----HHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHC
T ss_conf 7566552114686677998714531036861277778-----7888612830074887358773569888888744