HHSEARCH alignment of GI: 254781041 and SCOP domain: d1kf6c_

Alignment
>d1kf6c_ f.21.2.2 (C:) Fumarate reductase subunit FrdC {Escherichia coli [TaxId: 562]}
Probab=92.71  E-value=0.22  Score=24.44  Aligned_cols=105  Identities=10%  Similarity=0.143  Sum_probs=70.7

Q ss_pred             CCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             89997735102666599999999999999999999999999985163035546753068316999999999999999998
Q gi|254781041|r    8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGG   87 (129)
Q Consensus         8 RPlsphL~iyk~~~t~~~SI~HRitGi~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~yH~~nG   87 (129)
                      ||+.++=  ++-..-=..-.+.-.|.+....+...+.+++.++..|||+++.+..+..+++.-+.-.....+-.||...=
T Consensus         9 R~m~~~W--W~k~~FYr~YMlRE~T~v~~~~f~lvLl~Gl~~L~~g~~aw~~fv~flqnP~vv~lniiaLaa~L~Ha~Tw   86 (130)
T d1kf6c_           9 RPMTSTW--WKKLPFYRFYMLREGTAVPAVWFSIELIFGLFALKNGPEAWAGFVDFLQNPVIVIINLITLAAALLHTKTW   86 (130)
T ss_dssp             CCCCTTG--GGSSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHH--HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             8787407--65683899999988737999999999999999980587899999999718499999999999999999999


Q ss_pred             HHHH--HHHC---CHHCCHHHHHHHHHHHHHH
Q ss_conf             9999--9852---1233589999999999999
Q gi|254781041|r   88 IRYL--IWDV---SLCLDKKIATQMAKINIIA  114 (129)
Q Consensus        88 iRHL--~wD~---g~g~~~~~~~~s~~~vl~~  114 (129)
                      ..-.  .+..   |...+.+...+.-|.+.+.
T Consensus        87 F~l~Pk~m~i~v~~~~~~~~~iv~~~wa~~~~  118 (130)
T d1kf6c_          87 FELAPKAANIIVKDEKMGPEPIIKSLWAVTVV  118 (130)
T ss_dssp             HHHGGGGCCCBSSSSBCCSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf             99856765466258607738999999999999


SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: Heme-binding four-helical bundle
superfamily: Fumarate reductase respiratory complex transmembrane subunits
family: Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD)
domain: Fumarate reductase subunit FrdC
species: Escherichia coli [TaxId: 562]