HHSEARCH alignment of GI: 254781041 and SCOP domain: d1nekd_

Alignment
>d1nekd_ f.21.2.2 (D:) Succinate dehydrogenase subunit SdhD {Escherichia coli [TaxId: 562]}
Probab=98.60  E-value=8.1e-07  Score=54.10  Aligned_cols=75  Identities=21%  Similarity=0.193  Sum_probs=61.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHC
Q ss_conf             99999999999999999999999999985163035546753068316999999999999999998999998521233
Q gi|254781041|r   23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCL   99 (129)
Q Consensus        23 ~~~SI~HRitGi~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~yH~~nGiRHL~wD~g~g~   99 (129)
                      .--.+.+|+|++++....+.+..  ......+..|+.+.+.++++..+...........||...|+|+.+-|+-.+.
T Consensus        11 ~~~W~~qRvSAv~l~~l~~~~~~--~~~~~~~~~y~~~~~~~~~~~~~il~~l~l~~~~~H~~lGl~~IieDYi~~~   85 (113)
T d1nekd_          11 VHDFILVRATAIVLTLYIIYMVG--FFATSGELTYEVWIGFFASAFTKVFTLLALFSILIHAWIGMWQVLTDYVKPL   85 (113)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH--HHTTTSSCCHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH--HHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf             99999999999999999999999--9998299999999999939499999999999999999970756689955974


SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: Heme-binding four-helical bundle
superfamily: Fumarate reductase respiratory complex transmembrane subunits
family: Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD)
domain: Succinate dehydrogenase subunit SdhD
species: Escherichia coli [TaxId: 562]