HHSEARCH alignment of GI: 254781041 and SCOP domain: d2bs2c1

Alignment

Probab=97.31  E-value=0.0036  Score=34.17  Aligned_cols=77  Identities=13%  Similarity=0.016  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHC
Q ss_conf             599999999999999999999999999985163035546753068316999999999999999998999998521233
Q gi|254781041|r   22 TMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCL   99 (129)
Q Consensus        22 t~~~SI~HRitGi~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~yH~~nGiRHL~wD~g~g~   99 (129)
                      ....|-+-|+||+++.+++....+-+-.. ..+..++.....+.++.....-.....+..+|..||+..+..+.|...
T Consensus       122 ~t~~~~~q~~tG~ill~fi~~Hl~~~~~~-~~~~~~~~~~~~~~~~~~~~fY~l~l~av~lH~~~Gl~s~~~~wG~~~  198 (254)
T d2bs2c1         122 DTTLWWIQAMTGFAMFFLGSVHLYIMMTQ-PQTIGPVSSSFRMVSEWMWPLYLVLLFAVELHGSVGLYRLAVKWGWFD  198 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-GGGCSTTHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             24999999999999999999999999747-667879999999947069999999999999998882999998873047

SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: Heme-binding four-helical bundle
superfamily: Fumarate reductase respiratory complex transmembrane subunits
family: Fumarate reductase respiratory complex cytochrome b subunit, FrdC
domain: Fumarate reductase respiratory complex cytochrome b subunit, FrdC
species: Wolinella succinogenes [TaxId: 844]