HHsearch alignment for GI: 254781042 and conserved domain: pfam02313
>pfam02313 Fumarate_red_D Fumarate reductase subunit D. Fumarate reductase is a membrane-bound flavoenzyme consisting of four subunits, A-B. A and B comprise the membrane-extrinsic catalytic domain and C and D link the catalytic centres to the electron-transport chain. This family consists of the 13kD hydrophobic subunit D.
Probab=92.75 E-value=0.77 Score=24.91 Aligned_cols=54 Identities=17% Similarity=0.098 Sum_probs=44.2
Q ss_pred HHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCC-HHHH
Q ss_conf 99628999899999994625999999999999999984048899851-277-3189
Q gi|254781042|r 46 FIKYGDAPYEQIVSVLSNVAVASIMGLGTISISVHMQLGMQVIIEDY-IHY-RLLK 99 (130)
Q Consensus 46 ~~~~~~~~y~~~~~~~~~~~~~il~~l~~~~~~~Ha~lGl~~IieDY-I~~-~~~k 99 (130)
T Consensus 43 ~~~~~a~~y~~i~aFa~s~iG~l~ll~~i~lplWh~~HRihhglHDlkih~g~~~~ 98 (118)
T pfam02313 43 LIDAEALSYDRIIAFAQSWIGKLFLLVLIILPLWHAMHRIHHGLHDLKIHRGPAGK 98 (118)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCC
T ss_conf 67854258999999997089999999999999999999999877641012156744